Query 021808
Match_columns 307
No_of_seqs 164 out of 1326
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 05:50:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021808.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021808hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 1E-41 2.2E-46 300.7 27.9 284 2-289 187-472 (485)
2 KOG0254 Predicted transporter 100.0 6E-32 1.3E-36 247.7 27.8 288 2-292 212-504 (513)
3 PF00083 Sugar_tr: Sugar (and 100.0 1E-35 2.2E-40 269.1 -15.1 277 2-286 174-451 (451)
4 TIGR00887 2A0109 phosphate:H+ 100.0 8.9E-29 1.9E-33 226.5 18.7 270 2-284 207-501 (502)
5 KOG0253 Synaptic vesicle trans 100.0 1.5E-26 3.2E-31 192.8 19.1 258 6-279 237-527 (528)
6 TIGR01299 synapt_SV2 synaptic 99.9 3.8E-25 8.2E-30 207.3 21.6 141 125-279 601-741 (742)
7 PRK10077 xylE D-xylose transpo 99.9 1.5E-23 3.2E-28 191.2 29.8 272 3-289 198-475 (479)
8 KOG0252 Inorganic phosphate tr 99.9 1.3E-25 2.8E-30 192.3 9.2 268 2-287 228-513 (538)
9 TIGR00898 2A0119 cation transp 99.9 3.7E-22 8E-27 183.2 18.4 256 3-281 247-504 (505)
10 TIGR00879 SP MFS transporter, 99.9 7.9E-19 1.7E-23 159.4 27.6 276 3-281 200-480 (481)
11 KOG0255 Synaptic vesicle trans 99.8 1.4E-18 3.1E-23 160.1 23.8 265 3-287 238-508 (521)
12 PRK10642 proline/glycine betai 99.8 7E-18 1.5E-22 154.2 20.6 242 2-280 195-438 (490)
13 PRK10406 alpha-ketoglutarate t 99.7 1.1E-14 2.3E-19 131.3 21.1 170 99-279 259-430 (432)
14 PRK09952 shikimate transporter 99.7 1.4E-14 2.9E-19 130.8 20.5 167 99-275 266-436 (438)
15 PRK15075 citrate-proton sympor 99.5 7.4E-12 1.6E-16 112.9 21.1 178 97-283 252-431 (434)
16 PRK12307 putative sialic acid 99.5 2.2E-12 4.7E-17 116.0 17.4 164 71-248 221-385 (426)
17 PRK11663 regulatory protein Uh 99.4 3.8E-12 8.3E-17 114.8 15.7 167 100-277 260-430 (434)
18 PRK10489 enterobactin exporter 99.4 1.2E-11 2.6E-16 111.0 17.3 169 104-285 244-413 (417)
19 TIGR01299 synapt_SV2 synaptic 99.4 3.4E-11 7.4E-16 113.8 20.9 125 101-238 185-309 (742)
20 TIGR00903 2A0129 major facilit 99.4 1.2E-11 2.6E-16 109.0 15.9 179 71-274 185-367 (368)
21 PRK11273 glpT sn-glycerol-3-ph 99.4 3.5E-11 7.5E-16 109.2 18.9 165 100-275 270-440 (452)
22 PRK03893 putative sialic acid 99.4 5.8E-11 1.3E-15 108.9 20.4 141 102-253 294-435 (496)
23 PRK11551 putative 3-hydroxyphe 99.4 3.1E-11 6.7E-16 107.8 17.6 132 101-245 238-369 (406)
24 TIGR00895 2A0115 benzoate tran 99.4 3.2E-11 7E-16 107.0 16.9 164 100-276 34-197 (398)
25 TIGR00891 2A0112 putative sial 99.4 7.3E-11 1.6E-15 105.1 19.3 133 104-248 259-392 (405)
26 TIGR02332 HpaX 4-hydroxyphenyl 99.3 7.4E-11 1.6E-15 105.7 17.7 168 96-276 21-194 (412)
27 TIGR00893 2A0114 d-galactonate 99.3 4.5E-11 9.8E-16 105.7 15.6 184 70-265 207-393 (399)
28 PRK09556 uhpT sugar phosphate 99.3 6.2E-11 1.3E-15 107.9 16.6 135 100-245 275-411 (467)
29 TIGR00895 2A0115 benzoate tran 99.3 7.5E-11 1.6E-15 104.6 15.9 128 98-238 265-392 (398)
30 TIGR00883 2A0106 metabolite-pr 99.3 2.6E-10 5.7E-15 100.9 18.0 141 99-248 235-377 (394)
31 PRK11663 regulatory protein Uh 99.3 2.9E-10 6.3E-15 102.6 18.3 161 101-274 41-201 (434)
32 TIGR00887 2A0109 phosphate:H+ 99.3 6.2E-10 1.4E-14 102.3 20.7 111 123-239 60-170 (502)
33 PRK11273 glpT sn-glycerol-3-ph 99.3 1.8E-10 3.8E-15 104.5 16.8 163 103-275 49-212 (452)
34 TIGR00893 2A0114 d-galactonate 99.3 8.6E-11 1.9E-15 103.9 14.5 163 101-276 12-174 (399)
35 TIGR00712 glpT glycerol-3-phos 99.3 7E-11 1.5E-15 106.7 14.1 169 100-276 268-438 (438)
36 TIGR00889 2A0110 nucleoside tr 99.3 2.2E-10 4.7E-15 102.8 17.0 143 127-277 259-408 (418)
37 PRK03545 putative arabinose tr 99.3 3.8E-10 8.3E-15 100.3 18.4 159 104-275 30-188 (390)
38 TIGR00710 efflux_Bcr_CflA drug 99.3 1.9E-10 4.1E-15 101.8 16.3 161 104-277 26-186 (385)
39 PRK15403 multidrug efflux syst 99.3 3.7E-10 8.1E-15 101.2 18.0 158 106-276 39-196 (413)
40 COG2271 UhpC Sugar phosphate p 99.3 1E-10 2.2E-15 100.8 13.2 180 74-268 248-431 (448)
41 PRK10473 multidrug efflux syst 99.3 2.3E-10 4.9E-15 101.8 15.7 169 96-277 16-184 (392)
42 TIGR00891 2A0112 putative sial 99.2 4.5E-10 9.8E-15 100.0 17.2 165 98-276 27-193 (405)
43 PRK15402 multidrug efflux syst 99.2 6E-10 1.3E-14 99.6 17.8 159 105-276 35-193 (406)
44 PLN00028 nitrate transmembrane 99.2 8.7E-10 1.9E-14 100.6 18.9 159 99-271 52-219 (476)
45 PRK10213 nepI ribonucleoside t 99.2 9.8E-10 2.1E-14 97.9 18.6 159 105-276 42-200 (394)
46 PRK15462 dipeptide/tripeptide 99.2 7.8E-10 1.7E-14 100.1 18.0 154 98-263 24-181 (493)
47 PRK11551 putative 3-hydroxyphe 99.2 3E-10 6.5E-15 101.5 15.3 163 100-275 32-194 (406)
48 PRK10054 putative transporter; 99.2 7.7E-10 1.7E-14 98.6 17.3 164 98-275 22-186 (395)
49 PRK11010 ampG muropeptide tran 99.2 1.2E-09 2.6E-14 100.0 18.8 160 106-274 246-405 (491)
50 TIGR00711 efflux_EmrB drug res 99.2 1.4E-10 3.1E-15 106.0 12.7 167 98-277 17-183 (485)
51 PRK10077 xylE D-xylose transpo 99.2 1.6E-09 3.4E-14 99.0 19.4 159 114-275 51-218 (479)
52 PRK12307 putative sialic acid 99.2 1E-09 2.2E-14 98.7 16.7 144 98-254 33-176 (426)
53 TIGR00879 SP MFS transporter, 99.2 6.2E-10 1.4E-14 101.0 15.0 143 123-275 75-220 (481)
54 TIGR02332 HpaX 4-hydroxyphenyl 99.2 5.9E-10 1.3E-14 99.9 13.7 138 97-247 256-396 (412)
55 TIGR00890 2A0111 Oxalate/Forma 99.2 1.7E-09 3.6E-14 95.2 16.4 146 105-261 227-372 (377)
56 PRK09874 drug efflux system pr 99.1 5.6E-09 1.2E-13 93.2 19.2 161 101-274 32-196 (408)
57 PRK14995 methyl viologen resis 99.1 1.2E-09 2.6E-14 100.3 15.0 175 90-277 13-188 (495)
58 TIGR00881 2A0104 phosphoglycer 99.1 3.5E-10 7.7E-15 99.5 11.2 161 102-275 14-175 (379)
59 PRK10504 putative transporter; 99.1 2.6E-09 5.7E-14 97.4 17.0 165 97-274 24-188 (471)
60 PRK11102 bicyclomycin/multidru 99.1 1.3E-09 2.7E-14 96.4 14.1 159 104-275 12-170 (377)
61 PRK11652 emrD multidrug resist 99.1 3.8E-09 8.2E-14 94.0 17.1 159 106-277 31-189 (394)
62 PRK10642 proline/glycine betai 99.1 2.9E-09 6.3E-14 97.6 16.7 104 130-237 68-171 (490)
63 TIGR00903 2A0129 major facilit 99.1 1.8E-09 4E-14 95.1 14.7 158 104-275 12-169 (368)
64 PRK10406 alpha-ketoglutarate t 99.1 5.9E-09 1.3E-13 94.0 18.3 136 97-236 36-176 (432)
65 TIGR00899 2A0120 sugar efflux 99.1 5.7E-09 1.2E-13 92.1 17.7 147 105-265 221-368 (375)
66 TIGR00712 glpT glycerol-3-phos 99.1 2.9E-09 6.4E-14 96.2 16.2 162 104-275 48-210 (438)
67 TIGR00900 2A0121 H+ Antiporter 99.1 3.5E-09 7.6E-14 92.8 16.2 152 104-263 20-171 (365)
68 PRK09556 uhpT sugar phosphate 99.1 1.5E-09 3.2E-14 99.0 14.2 127 105-239 51-177 (467)
69 PRK10091 MFS transport protein 99.1 3.6E-09 7.7E-14 93.9 16.3 160 103-275 23-182 (382)
70 PRK03893 putative sialic acid 99.1 3.7E-09 8E-14 97.0 16.0 163 99-275 36-198 (496)
71 PRK09705 cynX putative cyanate 99.1 5.6E-09 1.2E-13 93.0 16.7 167 98-278 220-388 (393)
72 PF07690 MFS_1: Major Facilita 99.1 1.3E-09 2.8E-14 95.1 12.4 159 104-275 17-176 (352)
73 COG2814 AraJ Arabinose efflux 99.1 1.2E-08 2.6E-13 88.8 17.3 156 104-272 34-189 (394)
74 PRK10207 dipeptide/tripeptide 99.1 1.4E-08 3E-13 92.8 18.2 147 98-256 29-179 (489)
75 TIGR00880 2_A_01_02 Multidrug 99.1 2.5E-09 5.5E-14 80.1 11.2 132 131-274 10-141 (141)
76 COG2271 UhpC Sugar phosphate p 99.1 5.7E-09 1.2E-13 90.2 14.4 167 106-287 52-223 (448)
77 PRK09528 lacY galactoside perm 99.1 5E-09 1.1E-13 94.1 14.9 133 129-273 272-405 (420)
78 PRK03545 putative arabinose tr 99.0 3.1E-08 6.7E-13 88.1 19.0 163 104-281 226-389 (390)
79 PRK10489 enterobactin exporter 99.0 6.8E-09 1.5E-13 93.2 14.9 166 101-275 35-200 (417)
80 TIGR00886 2A0108 nitrite extru 99.0 1.9E-08 4.2E-13 88.4 17.5 129 100-241 18-147 (366)
81 TIGR00892 2A0113 monocarboxyla 99.0 1.1E-08 2.3E-13 93.0 15.9 159 101-272 37-195 (455)
82 PRK03699 putative transporter; 99.0 3E-08 6.5E-13 88.4 18.4 150 101-263 25-175 (394)
83 TIGR00881 2A0104 phosphoglycer 99.0 1.6E-09 3.5E-14 95.3 10.2 139 101-248 234-374 (379)
84 PRK15075 citrate-proton sympor 99.0 2.1E-08 4.6E-13 90.5 17.6 142 90-235 22-168 (434)
85 PRK15034 nitrate/nitrite trans 99.0 1.1E-08 2.5E-13 91.6 15.3 187 70-269 244-452 (462)
86 PRK11646 multidrug resistance 99.0 3E-08 6.5E-13 88.5 17.7 161 100-274 27-188 (400)
87 PRK11043 putative transporter; 99.0 3.3E-08 7.2E-13 88.2 17.9 154 107-274 30-183 (401)
88 KOG0569 Permease of the major 99.0 2E-08 4.3E-13 90.0 16.0 135 131-275 72-208 (485)
89 TIGR00898 2A0119 cation transp 99.0 5.4E-09 1.2E-13 96.2 13.0 154 105-275 111-267 (505)
90 cd06174 MFS The Major Facilita 99.0 2.2E-08 4.8E-13 87.0 16.1 147 99-258 15-161 (352)
91 PRK15034 nitrate/nitrite trans 99.0 7.3E-08 1.6E-12 86.5 19.3 169 112-289 64-252 (462)
92 TIGR00890 2A0111 Oxalate/Forma 99.0 7E-09 1.5E-13 91.2 12.1 159 101-273 21-179 (377)
93 PLN00028 nitrate transmembrane 99.0 1.1E-08 2.4E-13 93.4 13.6 150 103-267 272-429 (476)
94 PTZ00207 hypothetical protein; 99.0 5.8E-08 1.2E-12 89.6 18.1 162 100-271 44-205 (591)
95 TIGR00897 2A0118 polyol permea 99.0 4.8E-08 1E-12 87.3 17.3 158 98-265 237-395 (402)
96 PRK05122 major facilitator sup 99.0 3.7E-08 8.1E-13 87.8 16.6 143 101-248 33-176 (399)
97 TIGR00894 2A0114euk Na(+)-depe 99.0 1.2E-08 2.6E-13 92.9 13.2 136 128-273 85-221 (465)
98 TIGR00901 2A0125 AmpG-related 98.9 1.2E-08 2.5E-13 89.6 12.5 128 101-229 227-354 (356)
99 TIGR00924 yjdL_sub1_fam amino 98.9 8.7E-08 1.9E-12 87.4 18.4 154 97-263 24-184 (475)
100 TIGR00894 2A0114euk Na(+)-depe 98.9 2.8E-08 6E-13 90.5 14.9 158 69-240 252-416 (465)
101 PF11700 ATG22: Vacuole efflux 98.9 2.2E-07 4.7E-12 84.4 20.2 174 98-277 296-473 (477)
102 TIGR00710 efflux_Bcr_CflA drug 98.9 8.5E-08 1.8E-12 84.8 17.5 127 102-237 225-352 (385)
103 PRK12382 putative transporter; 98.9 6.2E-08 1.3E-12 86.2 16.5 130 105-239 37-167 (392)
104 TIGR00897 2A0118 polyol permea 98.9 3.9E-08 8.6E-13 87.8 15.2 124 101-233 31-154 (402)
105 PRK09952 shikimate transporter 98.9 8.1E-08 1.8E-12 86.8 17.2 102 132-237 77-178 (438)
106 PRK06814 acylglycerophosphoeth 98.9 6.7E-08 1.4E-12 97.6 18.3 139 127-275 60-198 (1140)
107 PRK11195 lysophospholipid tran 98.9 7.7E-08 1.7E-12 85.7 16.7 119 106-240 26-144 (393)
108 PRK11902 ampG muropeptide tran 98.9 1.2E-07 2.5E-12 84.8 17.2 148 107-265 234-384 (402)
109 PRK08633 2-acyl-glycerophospho 98.9 1.4E-07 3.1E-12 95.3 19.7 108 128-244 56-163 (1146)
110 TIGR00792 gph sugar (Glycoside 98.9 8.8E-08 1.9E-12 86.4 16.4 111 125-246 263-380 (437)
111 TIGR00892 2A0113 monocarboxyla 98.9 3.3E-08 7.1E-13 89.8 13.6 150 101-261 259-411 (455)
112 TIGR00899 2A0120 sugar efflux 98.9 9.9E-08 2.1E-12 84.1 16.3 159 104-275 18-180 (375)
113 PRK08633 2-acyl-glycerophospho 98.9 8.2E-08 1.8E-12 97.0 17.6 121 104-237 253-375 (1146)
114 TIGR00885 fucP L-fucose:H+ sym 98.9 1.8E-07 3.8E-12 83.9 17.9 130 104-243 24-153 (410)
115 PRK09705 cynX putative cyanate 98.9 1.4E-07 3.1E-12 84.0 16.7 131 101-245 27-157 (393)
116 cd06174 MFS The Major Facilita 98.9 1.9E-07 4.2E-12 81.1 17.1 155 98-265 190-346 (352)
117 PF06609 TRI12: Fungal trichot 98.9 2.2E-08 4.8E-13 92.0 11.1 105 106-225 67-171 (599)
118 KOG0255 Synaptic vesicle trans 98.9 7.9E-08 1.7E-12 88.9 14.9 135 125-275 124-258 (521)
119 COG2223 NarK Nitrate/nitrite t 98.8 5.9E-08 1.3E-12 84.0 12.8 186 71-268 211-398 (417)
120 PRK09584 tppB putative tripept 98.8 4.9E-07 1.1E-11 83.1 19.0 149 98-258 36-188 (500)
121 PRK10504 putative transporter; 98.8 1.7E-07 3.7E-12 85.5 15.9 154 73-241 256-410 (471)
122 KOG2615 Permease of the major 98.8 3.3E-08 7.2E-13 84.3 10.0 138 124-274 73-216 (451)
123 KOG2533 Permease of the major 98.8 1.8E-08 4E-13 91.1 9.0 81 68-154 263-348 (495)
124 PRK05122 major facilitator sup 98.8 1.5E-07 3.2E-12 83.9 14.5 164 102-281 235-398 (399)
125 PRK15011 sugar efflux transpor 98.8 5E-07 1.1E-11 80.5 17.6 156 104-274 237-393 (393)
126 TIGR00882 2A0105 oligosacchari 98.8 1.9E-07 4.1E-12 83.3 14.8 128 128-267 263-391 (396)
127 TIGR00901 2A0125 AmpG-related 98.8 2E-07 4.3E-12 81.8 14.7 160 104-275 9-182 (356)
128 PRK11102 bicyclomycin/multidru 98.8 4.4E-07 9.5E-12 80.2 16.5 117 104-230 215-332 (377)
129 PRK11902 ampG muropeptide tran 98.8 4.4E-07 9.6E-12 81.1 16.7 165 98-275 14-185 (402)
130 TIGR02718 sider_RhtX_FptX side 98.8 3.9E-07 8.4E-12 81.1 16.1 152 105-262 230-382 (390)
131 TIGR00711 efflux_EmrB drug res 98.8 2.3E-07 5E-12 84.8 14.8 157 72-242 249-406 (485)
132 PRK15402 multidrug efflux syst 98.8 1.2E-06 2.5E-11 78.4 18.8 127 105-240 237-364 (406)
133 COG2223 NarK Nitrate/nitrite t 98.8 9.8E-07 2.1E-11 76.6 17.2 153 107-271 38-193 (417)
134 PRK10473 multidrug efflux syst 98.8 9.4E-07 2E-11 78.6 18.0 61 105-166 225-286 (392)
135 PRK11010 ampG muropeptide tran 98.7 5.8E-07 1.3E-11 82.4 16.5 163 100-275 29-198 (491)
136 PRK03633 putative MFS family t 98.7 1E-06 2.2E-11 78.2 17.3 145 103-263 220-364 (381)
137 PF03825 Nuc_H_symport: Nucleo 98.7 1.8E-06 3.9E-11 76.8 18.3 193 71-275 200-399 (400)
138 TIGR00883 2A0106 metabolite-pr 98.7 7.8E-07 1.7E-11 78.7 16.0 103 133-239 49-151 (394)
139 PRK03633 putative MFS family t 98.7 9.7E-07 2.1E-11 78.3 16.4 130 98-240 21-150 (381)
140 PRK11043 putative transporter; 98.7 1.3E-06 2.8E-11 77.9 17.4 129 103-240 223-351 (401)
141 TIGR01301 GPH_sucrose GPH fami 98.7 1.2E-06 2.7E-11 79.2 16.7 175 99-275 20-222 (477)
142 PRK09874 drug efflux system pr 98.7 6.8E-07 1.5E-11 79.8 15.1 129 131-271 270-398 (408)
143 KOG1330 Sugar transporter/spin 98.7 2.1E-08 4.6E-13 87.6 5.0 156 113-281 63-219 (493)
144 PRK09528 lacY galactoside perm 98.7 1.2E-06 2.7E-11 78.7 16.7 59 101-160 28-87 (420)
145 TIGR00896 CynX cyanate transpo 98.7 5.7E-07 1.2E-11 78.9 14.0 131 98-243 15-145 (355)
146 PRK15011 sugar efflux transpor 98.7 2.1E-06 4.6E-11 76.5 17.6 161 103-276 35-199 (393)
147 PF06813 Nodulin-like: Nodulin 98.7 1.4E-06 3.1E-11 71.7 14.8 138 98-244 17-155 (250)
148 KOG0254 Predicted transporter 98.7 7.2E-07 1.6E-11 82.3 14.6 139 123-275 93-233 (513)
149 PRK12382 putative transporter; 98.6 1.3E-06 2.8E-11 77.8 15.4 153 101-268 234-386 (392)
150 COG2270 Permeases of the major 98.6 1.1E-06 2.4E-11 76.4 13.9 166 98-277 267-434 (438)
151 PF05977 MFS_3: Transmembrane 98.6 1.9E-06 4.2E-11 79.1 16.5 129 128-263 54-182 (524)
152 TIGR00805 oat sodium-independe 98.6 3.4E-07 7.4E-12 86.3 11.8 133 106-239 56-227 (633)
153 PRK10133 L-fucose transporter; 98.6 3.3E-06 7.1E-11 76.4 17.7 129 100-238 43-171 (438)
154 PRK03699 putative transporter; 98.6 8.3E-07 1.8E-11 79.1 13.7 152 99-264 221-373 (394)
155 TIGR00806 rfc RFC reduced fola 98.6 4.4E-06 9.5E-11 74.6 17.6 154 105-273 48-204 (511)
156 TIGR00900 2A0121 H+ Antiporter 98.6 2.1E-06 4.5E-11 75.2 15.8 128 104-243 232-360 (365)
157 TIGR00882 2A0105 oligosacchari 98.6 4.6E-06 1E-10 74.4 17.7 61 101-162 20-81 (396)
158 COG2814 AraJ Arabinose efflux 98.6 8.5E-06 1.8E-10 71.2 18.4 175 71-265 204-380 (394)
159 PRK11195 lysophospholipid tran 98.6 1.1E-05 2.4E-10 71.9 19.6 147 106-267 228-376 (393)
160 PRK10091 MFS transport protein 98.6 7.6E-06 1.7E-10 72.6 18.3 56 107-163 224-279 (382)
161 TIGR00886 2A0108 nitrite extru 98.6 6.6E-07 1.4E-11 78.6 11.3 121 101-231 243-364 (366)
162 TIGR00902 2A0127 phenyl propri 98.6 5.2E-06 1.1E-10 73.7 16.8 173 71-263 198-371 (382)
163 KOG2532 Permease of the major 98.5 5.1E-06 1.1E-10 75.1 16.5 165 115-290 70-239 (466)
164 TIGR02718 sider_RhtX_FptX side 98.5 7.6E-06 1.6E-10 72.8 17.5 173 93-273 11-186 (390)
165 PF07690 MFS_1: Major Facilita 98.5 4.5E-07 9.7E-12 79.0 8.7 126 101-236 224-351 (352)
166 TIGR00792 gph sugar (Glycoside 98.5 4.7E-06 1E-10 75.2 15.0 162 107-275 24-198 (437)
167 PRK14995 methyl viologen resis 98.5 7E-06 1.5E-10 75.5 15.4 151 72-237 253-404 (495)
168 PRK11128 putative 3-phenylprop 98.5 1.6E-05 3.4E-10 70.6 17.2 89 70-164 197-285 (382)
169 KOG3764 Vesicular amine transp 98.4 7.9E-07 1.7E-11 76.5 7.2 139 128-278 115-254 (464)
170 PF01306 LacY_symp: LacY proto 98.4 2.2E-06 4.8E-11 75.5 10.2 189 71-276 213-405 (412)
171 PRK09669 putative symporter Ya 98.4 1.5E-05 3.3E-10 72.2 16.0 129 104-239 30-165 (444)
172 PRK09848 glucuronide transport 98.4 9.3E-06 2E-10 73.7 14.6 159 71-244 221-386 (448)
173 PF13347 MFS_2: MFS/sugar tran 98.4 2.7E-05 5.9E-10 70.2 17.5 159 70-244 217-382 (428)
174 KOG0252 Inorganic phosphate tr 98.4 1.8E-06 3.9E-11 75.7 9.2 103 120-227 85-187 (538)
175 PF00083 Sugar_tr: Sugar (and 98.4 3.9E-09 8.5E-14 95.7 -8.0 101 127-236 54-154 (451)
176 PF05977 MFS_3: Transmembrane 98.3 1.5E-05 3.3E-10 73.3 14.4 162 105-279 240-403 (524)
177 PRK11128 putative 3-phenylprop 98.3 3.6E-05 7.7E-10 68.3 16.3 162 99-275 20-182 (382)
178 TIGR00896 CynX cyanate transpo 98.3 1E-05 2.2E-10 71.0 12.7 134 100-247 214-349 (355)
179 KOG2504 Monocarboxylate transp 98.3 1.6E-05 3.6E-10 72.7 14.2 157 102-272 65-222 (509)
180 PRK10213 nepI ribonucleoside t 98.3 0.0001 2.3E-09 65.7 18.8 47 105-152 239-285 (394)
181 TIGR00902 2A0127 phenyl propri 98.3 6.1E-05 1.3E-09 66.8 17.0 145 99-257 20-165 (382)
182 PRK11652 emrD multidrug resist 98.3 8.1E-05 1.8E-09 66.3 17.1 36 202-238 317-352 (394)
183 PRK10429 melibiose:sodium symp 98.3 1.7E-05 3.6E-10 72.6 12.7 40 126-165 273-312 (473)
184 PRK11646 multidrug resistance 98.2 7.1E-05 1.5E-09 66.9 16.3 130 104-246 229-359 (400)
185 PRK11462 putative transporter; 98.2 9.7E-05 2.1E-09 67.3 16.8 130 104-240 30-166 (460)
186 PF13347 MFS_2: MFS/sugar tran 98.2 1.1E-05 2.4E-10 72.8 10.3 162 107-273 26-200 (428)
187 PRK09669 putative symporter Ya 98.2 0.0001 2.2E-09 66.8 16.3 104 127-240 272-382 (444)
188 PRK10054 putative transporter; 98.2 3.7E-05 8.1E-10 68.6 13.2 110 134-255 259-368 (395)
189 KOG2504 Monocarboxylate transp 98.2 9.3E-06 2E-10 74.3 9.2 182 72-272 292-476 (509)
190 TIGR01301 GPH_sucrose GPH fami 98.1 0.00017 3.7E-09 65.4 16.6 151 124-276 310-476 (477)
191 COG3104 PTR2 Dipeptide/tripept 98.1 4.4E-05 9.6E-10 68.0 12.2 168 89-268 28-203 (498)
192 KOG2532 Permease of the major 98.1 3.7E-05 8.1E-10 69.6 11.9 76 67-148 247-323 (466)
193 PRK10429 melibiose:sodium symp 98.1 0.00015 3.3E-09 66.3 16.0 127 103-236 26-159 (473)
194 PRK10133 L-fucose transporter; 98.1 0.00015 3.3E-09 65.6 15.8 129 104-248 279-409 (438)
195 TIGR01272 gluP glucose/galacto 98.1 0.00015 3.2E-09 62.5 14.9 133 101-249 158-293 (310)
196 PRK06814 acylglycerophosphoeth 98.1 9.3E-05 2E-09 75.1 15.6 137 104-242 246-392 (1140)
197 PRK15403 multidrug efflux syst 98.1 0.0012 2.6E-08 59.3 21.0 73 72-150 212-286 (413)
198 COG2211 MelB Na+/melibiose sym 98.1 9.4E-05 2E-09 66.2 13.1 115 121-245 274-395 (467)
199 PF11700 ATG22: Vacuole efflux 98.1 0.00037 8.1E-09 63.5 17.3 144 123-276 74-252 (477)
200 KOG2533 Permease of the major 98.1 7.7E-05 1.7E-09 67.9 12.8 142 123-276 85-232 (495)
201 PF05631 DUF791: Protein of un 98.0 0.00089 1.9E-08 57.6 17.6 56 108-164 59-114 (354)
202 TIGR00788 fbt folate/biopterin 98.0 8.9E-05 1.9E-09 67.7 12.5 132 112-248 282-415 (468)
203 TIGR00885 fucP L-fucose:H+ sym 98.0 0.00027 5.9E-09 63.4 14.9 128 103-246 252-381 (410)
204 PRK11462 putative transporter; 98.0 0.00056 1.2E-08 62.4 17.0 31 126-156 270-300 (460)
205 KOG0253 Synaptic vesicle trans 97.9 4.6E-05 9.9E-10 65.4 8.4 150 111-276 106-255 (528)
206 KOG4686 Predicted sugar transp 97.9 0.00031 6.7E-09 58.3 12.4 118 106-238 287-406 (459)
207 PRK09848 glucuronide transport 97.9 0.00091 2E-08 60.7 16.3 55 105-160 30-90 (448)
208 KOG2816 Predicted transporter 97.9 0.00069 1.5E-08 61.3 14.9 135 131-281 74-209 (463)
209 COG2211 MelB Na+/melibiose sym 97.8 0.0011 2.3E-08 59.6 14.6 141 101-248 30-177 (467)
210 COG0738 FucP Fucose permease [ 97.7 0.0013 2.7E-08 57.4 13.4 159 70-249 228-387 (422)
211 KOG2563 Permease of the major 97.7 0.0015 3.2E-08 57.8 13.7 139 96-243 61-199 (480)
212 TIGR00889 2A0110 nucleoside tr 97.7 0.001 2.2E-08 59.8 13.1 57 104-161 23-81 (418)
213 COG0738 FucP Fucose permease [ 97.7 0.0051 1.1E-07 53.7 16.4 127 104-240 34-160 (422)
214 PF12832 MFS_1_like: MFS_1 lik 97.6 0.00042 9.1E-09 46.1 7.6 59 96-155 13-71 (77)
215 PF03825 Nuc_H_symport: Nucleo 97.5 0.0034 7.3E-08 56.1 14.2 62 99-161 18-80 (400)
216 TIGR00926 2A1704 Peptide:H+ sy 97.5 0.012 2.6E-07 55.9 18.4 130 110-244 15-148 (654)
217 COG2807 CynX Cyanate permease 97.5 0.0048 1E-07 53.2 13.9 87 72-164 202-289 (395)
218 TIGR00788 fbt folate/biopterin 97.5 0.0048 1E-07 56.4 15.1 154 108-275 51-212 (468)
219 PF06609 TRI12: Fungal trichot 97.5 0.0089 1.9E-07 55.7 16.4 103 124-236 354-457 (599)
220 PF01306 LacY_symp: LacY proto 97.1 0.0031 6.7E-08 55.9 8.5 51 104-155 28-79 (412)
221 PF05978 UNC-93: Ion channel r 97.0 0.02 4.4E-07 43.7 11.5 128 96-236 9-141 (156)
222 TIGR00924 yjdL_sub1_fam amino 97.0 0.061 1.3E-06 49.3 16.9 71 200-270 397-467 (475)
223 KOG1330 Sugar transporter/spin 97.0 0.0097 2.1E-07 52.9 10.8 113 113-233 278-398 (493)
224 PRK10207 dipeptide/tripeptide 96.8 0.036 7.8E-07 51.0 13.8 105 132-238 322-433 (489)
225 KOG2563 Permease of the major 96.7 0.084 1.8E-06 47.0 14.4 151 122-281 304-460 (480)
226 PF03092 BT1: BT1 family; Int 96.6 0.067 1.4E-06 48.4 13.4 156 107-275 14-179 (433)
227 TIGR00805 oat sodium-independe 96.6 0.012 2.7E-07 55.8 9.0 87 71-162 323-412 (633)
228 PF03209 PUCC: PUCC protein; 96.2 0.22 4.8E-06 43.9 13.6 111 133-245 28-150 (403)
229 KOG2325 Predicted transporter/ 96.1 0.15 3.2E-06 46.4 12.4 38 128-166 80-119 (488)
230 PRK09584 tppB putative tripept 96.1 0.5 1.1E-05 43.7 16.4 104 133-239 330-437 (500)
231 COG0477 ProP Permeases of the 95.4 0.52 1.1E-05 39.2 13.1 88 130-227 50-138 (338)
232 PF03092 BT1: BT1 family; Int 95.3 0.059 1.3E-06 48.8 7.2 42 207-248 341-382 (433)
233 TIGR00769 AAA ADP/ATP carrier 95.2 1.8 3.9E-05 39.6 16.2 109 133-242 58-187 (472)
234 PRK15462 dipeptide/tripeptide 95.2 1.4 3.1E-05 40.5 15.6 103 133-238 322-432 (493)
235 KOG2615 Permease of the major 95.0 0.21 4.6E-06 43.7 8.9 33 207-239 375-407 (451)
236 COG2807 CynX Cyanate permease 94.9 1.5 3.2E-05 38.3 13.7 156 101-274 30-186 (395)
237 KOG3762 Predicted transporter 94.7 0.049 1.1E-06 49.6 4.7 85 132-228 419-503 (618)
238 KOG3098 Uncharacterized conser 94.5 1.1 2.4E-05 40.7 12.7 114 123-239 283-407 (461)
239 PTZ00207 hypothetical protein; 94.5 0.66 1.4E-05 43.7 11.7 86 203-289 471-573 (591)
240 KOG3626 Organic anion transpor 94.4 0.078 1.7E-06 50.4 5.4 87 71-162 385-474 (735)
241 PF03137 OATP: Organic Anion T 94.3 0.012 2.5E-07 54.7 0.0 57 96-152 318-377 (539)
242 COG2270 Permeases of the major 94.3 1.4 3E-05 39.2 12.6 94 132-234 71-165 (438)
243 PF06779 DUF1228: Protein of u 94.1 0.8 1.7E-05 30.9 8.5 62 105-167 14-75 (85)
244 PF06963 FPN1: Ferroportin1 (F 94.0 0.88 1.9E-05 41.0 11.2 127 104-234 279-406 (432)
245 KOG0637 Sucrose transporter an 92.3 0.12 2.6E-06 46.2 2.9 132 101-234 50-193 (498)
246 PF01770 Folate_carrier: Reduc 92.2 8.2 0.00018 34.6 15.4 35 132-166 54-88 (412)
247 PF03219 TLC: TLC ATP/ADP tran 91.8 4.8 0.0001 37.1 12.7 42 204-245 164-205 (491)
248 KOG3762 Predicted transporter 91.8 0.38 8.3E-06 44.0 5.5 61 97-158 25-85 (618)
249 KOG1237 H+/oligopeptide sympor 90.8 15 0.00032 34.7 16.9 59 107-166 62-121 (571)
250 PF01770 Folate_carrier: Reduc 90.6 0.9 2E-05 40.5 6.6 59 96-154 260-320 (412)
251 TIGR00939 2a57 Equilibrative N 86.0 17 0.00037 33.1 11.9 20 130-149 56-75 (437)
252 TIGR00939 2a57 Equilibrative N 85.3 5.4 0.00012 36.2 8.4 31 202-232 390-420 (437)
253 KOG3098 Uncharacterized conser 84.6 12 0.00027 34.1 10.2 102 125-239 56-157 (461)
254 KOG1479 Nucleoside transporter 84.0 31 0.00068 30.9 14.2 9 210-218 142-150 (406)
255 PF03209 PUCC: PUCC protein; 83.5 33 0.00071 30.7 14.3 57 110-167 236-293 (403)
256 KOG2816 Predicted transporter 83.3 6.6 0.00014 35.9 8.1 119 112-244 271-390 (463)
257 PRK03612 spermidine synthase; 82.7 42 0.00091 31.4 14.6 22 221-242 146-167 (521)
258 TIGR01272 gluP glucose/galacto 82.5 4.1 8.9E-05 35.0 6.2 39 206-244 32-70 (310)
259 KOG3764 Vesicular amine transp 82.5 2 4.4E-05 38.1 4.2 37 127-163 314-352 (464)
260 KOG4686 Predicted sugar transp 82.0 0.36 7.8E-06 40.7 -0.4 95 132-235 92-187 (459)
261 PF11947 DUF3464: Protein of u 80.4 9.9 0.00022 28.8 6.7 88 141-234 56-144 (153)
262 PF03137 OATP: Organic Anion T 78.6 0.4 8.7E-06 44.7 -1.4 60 106-166 26-85 (539)
263 PF13000 Acatn: Acetyl-coenzym 77.4 19 0.00041 33.2 8.7 23 132-154 52-75 (544)
264 KOG2325 Predicted transporter/ 76.6 2.1 4.6E-05 39.1 2.6 45 206-250 410-454 (488)
265 PF00854 PTR2: POT family; In 76.5 17 0.00037 32.1 8.4 65 201-265 50-117 (372)
266 PF01733 Nucleoside_tran: Nucl 74.2 0.79 1.7E-05 39.4 -0.7 24 201-224 265-288 (309)
267 COG3104 PTR2 Dipeptide/tripept 72.4 81 0.0018 29.1 13.1 103 133-237 338-447 (498)
268 KOG3574 Acetyl-CoA transporter 72.2 74 0.0016 28.6 10.7 52 96-153 44-102 (510)
269 TIGR00806 rfc RFC reduced fola 71.6 25 0.00054 32.4 8.1 53 96-148 275-327 (511)
270 PF02487 CLN3: CLN3 protein; 71.4 21 0.00045 32.0 7.4 30 206-235 357-386 (402)
271 PF02487 CLN3: CLN3 protein; 68.5 28 0.0006 31.3 7.6 17 132-148 72-88 (402)
272 KOG1479 Nucleoside transporter 66.5 99 0.0022 27.8 11.4 33 200-232 359-391 (406)
273 KOG3810 Micronutrient transpor 64.2 82 0.0018 27.9 9.2 58 96-153 247-305 (433)
274 KOG4332 Predicted sugar transp 62.5 53 0.0012 27.9 7.6 24 133-156 86-109 (454)
275 KOG3626 Organic anion transpor 61.7 1.2E+02 0.0026 29.6 10.8 60 107-167 121-180 (735)
276 PF06963 FPN1: Ferroportin1 (F 51.5 1.9E+02 0.0042 26.3 17.8 31 125-155 44-74 (432)
277 PF00558 Vpu: Vpu protein; In 45.9 30 0.00066 23.0 3.0 24 280-304 37-63 (81)
278 COG3817 Predicted membrane pro 44.0 1.9E+02 0.0041 24.1 10.9 40 252-291 127-166 (313)
279 PF02990 EMP70: Endomembrane p 39.1 3.3E+02 0.0072 25.5 10.0 9 72-80 252-260 (521)
280 PF09605 Trep_Strep: Hypotheti 37.4 1.5E+02 0.0034 23.3 6.5 37 130-166 39-75 (186)
281 PRK10697 DNA-binding transcrip 35.8 35 0.00077 24.6 2.4 17 9-25 53-69 (118)
282 PF04647 AgrB: Accessory gene 34.6 51 0.0011 25.8 3.4 25 260-284 108-133 (185)
283 PF03219 TLC: TLC ATP/ADP tran 33.0 4.1E+02 0.0089 24.7 10.5 32 131-162 331-362 (491)
284 PF07672 MFS_Mycoplasma: Mycop 32.9 3E+02 0.0065 23.2 11.0 19 68-86 84-102 (267)
285 COG2119 Predicted membrane pro 32.1 2E+02 0.0043 22.7 6.0 31 127-157 142-172 (190)
286 TIGR03032 conserved hypothetic 31.5 16 0.00034 31.4 -0.0 10 17-26 202-211 (335)
287 PF13493 DUF4118: Domain of un 31.1 52 0.0011 22.8 2.7 19 131-149 87-105 (105)
288 KOG4830 Predicted sugar transp 30.5 63 0.0014 27.3 3.2 48 104-152 38-94 (412)
289 smart00793 AgrB Accessory gene 29.6 93 0.002 24.4 4.1 24 261-284 109-133 (184)
290 PF14887 HMG_box_5: HMG (high 29.1 1.7E+02 0.0038 19.3 4.7 16 29-44 27-42 (85)
291 TIGR00986 3a0801s05tom22 mitoc 29.1 87 0.0019 23.5 3.5 15 210-224 59-73 (145)
292 PF04281 Tom22: Mitochondrial 28.4 1.1E+02 0.0025 22.7 4.0 16 210-225 61-76 (137)
293 TIGR00880 2_A_01_02 Multidrug 26.8 2.2E+02 0.0048 19.8 6.5 27 128-154 96-122 (141)
294 PF05297 Herpes_LMP1: Herpesvi 26.3 21 0.00045 29.9 -0.1 13 265-277 179-191 (381)
295 PF03547 Mem_trans: Membrane t 25.7 3.9E+02 0.0084 23.5 7.9 13 134-146 10-22 (385)
296 COG3202 ATP/ADP translocase [E 25.7 5.5E+02 0.012 23.9 14.4 37 204-240 168-204 (509)
297 KOG1277 Endosomal membrane pro 24.2 1.7E+02 0.0037 26.8 4.9 13 132-144 336-348 (593)
298 KOG2881 Predicted membrane pro 24.1 98 0.0021 25.9 3.3 20 138-157 259-278 (294)
299 TIGR02185 Trep_Strep conserved 23.7 2.6E+02 0.0057 22.0 5.6 33 129-161 40-72 (189)
300 PF13428 TPR_14: Tetratricopep 22.0 1.3E+02 0.0027 16.9 2.7 20 24-43 9-28 (44)
301 PF12854 PPR_1: PPR repeat 21.6 1.1E+02 0.0023 16.2 2.2 16 26-41 17-32 (34)
302 PF00672 HAMP: HAMP domain; I 20.9 2.1E+02 0.0045 17.7 3.9 24 267-290 15-38 (70)
303 PF06027 DUF914: Eukaryotic pr 20.2 6E+02 0.013 22.3 9.7 31 132-162 180-211 (334)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-41 Score=300.67 Aligned_cols=284 Identities=31% Similarity=0.574 Sum_probs=241.8
Q ss_pred cccchHHHHHHHHHhccCCCChHHHHh-cCCHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHH-hccccchhhhhcchh
Q 021808 2 LGVSAVPAIIQFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELR-KKKTVRYLDVFKSKE 79 (307)
Q Consensus 2 ~~i~~~p~~~~~~~~~~~pESp~wL~~-~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 79 (307)
+++..+|+++.++..+++|||||||+. |||++||++.++++++..+.+++.+++.+..++++. ++++.+.+++++++.
T Consensus 187 ~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~ 266 (485)
T KOG0569|consen 187 LAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPT 266 (485)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcc
Confidence 456789999999999999999999998 899999999999999988777766665444333332 235667999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHH
Q 021808 80 IRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGV 159 (307)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~ 159 (307)
+|+.+.+++++.+.+++.|.+.+.+|...++.+.|.+.. .+.+.+...+.+.++.++++.+++||+|||++++.+..++
T Consensus 267 lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~-~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~ 345 (485)
T KOG0569|consen 267 LRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPE-EAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLM 345 (485)
T ss_pred hhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 999999999999999999999999999999999998665 4678888888899999999999999999999999998888
Q ss_pred HHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHh
Q 021808 160 IISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQT 239 (307)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~ 239 (307)
.++.+.+.......+... .+..+..+.+.+++...++.|++|++|.+.+|+||++.|+.+.+++...+|.++++....
T Consensus 346 ~~~~~~~~~~~~l~~~~~--~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~ 423 (485)
T KOG0569|consen 346 AVALLLMSIALFLSNSFG--SWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFA 423 (485)
T ss_pred HHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHH
Confidence 887777654443322211 223344567777888899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHhhc
Q 021808 240 FLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLEVEQMWKER 289 (307)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l~e~~~~~~~~ 289 (307)
++.+....|. ..|+++.+.+.+..++.++.+||||||+.+|+.+.++++
T Consensus 424 fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 424 FPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 9998888875 677888888888888899999999999999999999876
No 2
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=6e-32 Score=247.70 Aligned_cols=288 Identities=38% Similarity=0.647 Sum_probs=225.0
Q ss_pred cccchHHHHHHHHHhccCCCChHHHHhcCCHHHHHHHHHHhcC--chhhHHHHHHHHHHHHHHH-Hhccccchhhhhcch
Q 021808 2 LGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYD--IARLEDEIDHLSAAAEEEL-RKKKTVRYLDVFKSK 78 (307)
Q Consensus 2 ~~i~~~p~~~~~~~~~~~pESp~wL~~~~~~~~a~~~l~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 78 (307)
++++.+|+++..+...++|||||||+.+|+.+|++..+++++. ..+.+++.++.+.....+. ..+.+..+.++++ +
T Consensus 212 ~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~ 290 (513)
T KOG0254|consen 212 LGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFS-P 290 (513)
T ss_pred HHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcC-c
Confidence 4677899998888888999999999999999999999999988 4555555555542211111 1111223455555 5
Q ss_pred hHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHH
Q 021808 79 EIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAG 158 (307)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~ 158 (307)
..++..+++..+..++++++++...+|.+++++..|..++. ...++...++.++++.++.++.||+|||++++.+...
T Consensus 291 ~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~--~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~ 368 (513)
T KOG0254|consen 291 KVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT--FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAG 368 (513)
T ss_pred chHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHH
Confidence 66777788888999999999999999999999999987654 4556667777888999999999999999999999988
Q ss_pred HHHHHHHHHHHHhhcCCCC-CCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHH
Q 021808 159 VIISLVLLSWAFISGSSAS-SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVA 237 (307)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~ 237 (307)
+.++.+.++.......... ......+..+.+.+++...++.+.++++|.+.+|+||.++|+++.+++...++..++...
T Consensus 369 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~ 448 (513)
T KOG0254|consen 369 MSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLIS 448 (513)
T ss_pred HHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHH
Confidence 8888887765554332211 123345667777888888999999999999999999999999999999999999998888
Q ss_pred HhhHHHHHHhCCchhHHHHHHHHHHHHH-HHHhhccCCCCCCHHHHHHHHhhccCC
Q 021808 238 QTFLTVAELVGTGATFLILAGIAVLAVV-FVILFVPETQGLTFLEVEQMWKERAWG 292 (307)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lpet~~~~l~e~~~~~~~~~~~ 292 (307)
..++......+.+..+.++++++.+... .++++.|||||+++||+++.++++.+.
T Consensus 449 ~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~~~~~ 504 (513)
T KOG0254|consen 449 FFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEEGIKP 504 (513)
T ss_pred HHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHcCCch
Confidence 7777766554434567777777766666 678889999999999999999876553
No 3
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.97 E-value=1e-35 Score=269.14 Aligned_cols=277 Identities=36% Similarity=0.662 Sum_probs=196.3
Q ss_pred cccchHHHHHHHHHhccCCCChHHHHhcCCHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHhccccchhhhhcchhHH
Q 021808 2 LGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIR 81 (307)
Q Consensus 2 ~~i~~~p~~~~~~~~~~~pESp~wL~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (307)
+.++++|+++.++...++|||||||..|||.|||++.++++++.+..++|.++..++.++ .++.+.++.+++++++.+
T Consensus 174 ~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~ 251 (451)
T PF00083_consen 174 LIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKE--SQESKASWRDLFRNKKYR 251 (451)
T ss_pred ccccccccccccccccccccccceeccccccccccccccccccccccccccccccccccc--ccccceeeeecccccccc
Confidence 457778888888888999999999999999999999999976554444443333221111 111124567777776655
Q ss_pred HHHHHHHHHHHHHhhcCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHH
Q 021808 82 LAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVII 161 (307)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~ 161 (307)
+.++....+....++++++...+|.+.+.++.+.+.. ...+....+...++.+++.+++||+|||++++.+...+++
T Consensus 252 ~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~ 328 (451)
T PF00083_consen 252 KRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS---FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAI 328 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccc
Confidence 5556656666666677777888888988888777654 3344555556778888889999999999999888777766
Q ss_pred HHHHHH-HHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhh
Q 021808 162 SLVLLS-WAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTF 240 (307)
Q Consensus 162 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~ 240 (307)
+.+.+. ......... .......+....++...+..+.+++.+.+.+|+||+++|+++.|++...+++++++.+...
T Consensus 329 ~~~~~~~~~~~~~~~~---~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~ 405 (451)
T PF00083_consen 329 CSLILGIIFFLGVSSS---SWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLF 405 (451)
T ss_pred cccccccccccccccc---cccccccceeeeecccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 665553 111111110 0011222333344445667788899999999999999999999999999998888877766
Q ss_pred HHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHH
Q 021808 241 LTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLEVEQMW 286 (307)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l~e~~~~~ 286 (307)
+......+....+.++++++++..+++++++||||||++||++++|
T Consensus 406 ~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~f 451 (451)
T PF00083_consen 406 PYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEMF 451 (451)
T ss_pred ccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhhC
Confidence 6655544434466777777777777788899999999999999875
No 4
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.96 E-value=8.9e-29 Score=226.55 Aligned_cols=270 Identities=24% Similarity=0.334 Sum_probs=162.8
Q ss_pred cccchHHHHHHHHHhccCCCChHHHHhcCCHH-HHHHHHHHhcCchhhHHHHHHHHHHHHHHHHhccccchhhhhcch--
Q 021808 2 LGVSAVPAIIQFVLMLFMPESPRWLFMKSDKE-KAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSK-- 78 (307)
Q Consensus 2 ~~i~~~p~~~~~~~~~~~pESp~wL~~~~~~~-~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 78 (307)
+.++++|+++.++.++++|||||||+.|+|+| ++.+.+++.++.+. +++.++.++.++ + ++..+.++.++++++
T Consensus 207 ~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~-~-~~~~~~~~~~l~~~~~~ 283 (502)
T TIGR00887 207 IGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKI-EAEPDEVEKAST-A-VEVPKASWSDFFTHFFK 283 (502)
T ss_pred HHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhcccc-ccCcccccchhc-c-ccchhhhHHHHHHHHhh
Confidence 35678899988888899999999999998874 57777777654321 111111110000 0 011112456666532
Q ss_pred -hHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHHcCCCChHH-----------HHHHHHHHHHHHHHHHHHHHHhhccc
Q 021808 79 -EIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQL-----------ALLLSLAVAGTNAVGTIVGIYLIDHF 146 (307)
Q Consensus 79 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~l~Dr~ 146 (307)
+.++.++..... .+.+...++....|.|+++++.|.+..+. ............+++.+++++++||+
T Consensus 284 ~~~~~~~~~~~~~-~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~ 362 (502)
T TIGR00887 284 WRHGKHLLGTAGS-WFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII 362 (502)
T ss_pred hHHHHHHHHHHHH-HHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 222222221111 12222233445566888888887754311 11112233334566888899999999
Q ss_pred CchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHH
Q 021808 147 GRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSA 226 (307)
Q Consensus 147 GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~ 226 (307)
|||++++.+..+++++.+.+......... ... .....++..++..+.++..+.+.+|+||++.|+++.|+..
T Consensus 363 gRR~~l~~~~~~~~~~~~~l~~~~~~~~~------~~~--~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~ 434 (502)
T TIGR00887 363 GRKPIQLMGFFILTVLFFVLGFAYNHLST------HGF--LAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISA 434 (502)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhcch------hHH--HHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHH
Confidence 99999877766665555444332211110 011 1112222233456677788889999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHh----------CCchhHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHH
Q 021808 227 TVNWISNLIVAQTFLTVAELV----------GTGATFLILAGIAVLAVVFVILFVPETQGLTFLEVEQ 284 (307)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l~e~~~ 284 (307)
..+++++++++..++.+.+.. +....+.+++++++++.+. .+++|||||+++||+|+
T Consensus 435 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~-~~~lpEt~~~~leei~~ 501 (502)
T TIGR00887 435 ASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF-TLLIPETKGKSLEELSG 501 (502)
T ss_pred HHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH-heEeccCCCCCHHhhhC
Confidence 999999999888777665532 1123456666666655553 46789999999999875
No 5
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.95 E-value=1.5e-26 Score=192.75 Aligned_cols=258 Identities=19% Similarity=0.190 Sum_probs=158.7
Q ss_pred hHHHHHHHHHhccCCCChHHHHhcCCHHHHHHHHHHhcCchhhHH-----------HHHHHHHHHHHHH--H-hccccch
Q 021808 6 AVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLED-----------EIDHLSAAAEEEL--R-KKKTVRY 71 (307)
Q Consensus 6 ~~p~~~~~~~~~~~pESp~wL~~~~~~~~a~~~l~~~~~~~~~~~-----------~~~~~~~~~~~~~--~-~~~~~~~ 71 (307)
.+|..+......|.||||||++.||+.+||.+.++++...|+.+- +.|++....++.+ . ++...+.
T Consensus 237 ~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~ 316 (528)
T KOG0253|consen 237 STPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGT 316 (528)
T ss_pred HhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccch
Confidence 477777777888999999999999999999999999975543211 1111000000000 0 1111234
Q ss_pred hhhhcchhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHHcC-------------------CCChHHHHHHHHHHHHHH
Q 021808 72 LDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAG-------------------FQSNQLALLLSLAVAGTN 132 (307)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-------------------~~~~~~~~~~~~~~~~~~ 132 (307)
.+++. +++|++.+..+...+... ..++........+.+..+ -..+...+...+......
T Consensus 317 ~nLls-p~lrkttlllw~iwfgna-fsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslae 394 (528)
T KOG0253|consen 317 TNLLS-PKLRKTTLLLWRIWFGNA-FSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAE 394 (528)
T ss_pred HhhcC-hHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhh
Confidence 55665 444554444332222211 112222222222222221 011222355667777778
Q ss_pred HHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeeccc
Q 021808 133 AVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEV 212 (307)
Q Consensus 133 ~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El 212 (307)
++|.++.+.++||+|||+.+..+.+.++++.+++..... .+. ..+..+.. -.+..+...+.|+|.+|+
T Consensus 395 fPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~-rn~----------~tvllf~a-rafisg~fqvaYvYtPEV 462 (528)
T KOG0253|consen 395 FPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKT-RNA----------YTVLLFTA-RAFISGAFQVAYVYTPEV 462 (528)
T ss_pred CCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcC-cch----------hHHHHHHH-HHHHhchheEEEEecCcc
Confidence 999999999999999999998888887777766543321 111 11111111 233445566889999999
Q ss_pred CCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCCCCCH
Q 021808 213 YPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTF 279 (307)
Q Consensus 213 fPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l 279 (307)
|||.+|+++.|.+.+.+++|+++.+.+. +....+...+..++..+++++.+...++.-|||||++
T Consensus 463 yPTavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 463 YPTAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred cchhhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 9999999999999999999999877654 2222334456677888888777766566669999975
No 6
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.94 E-value=3.8e-25 Score=207.26 Aligned_cols=141 Identities=20% Similarity=0.208 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccc
Q 021808 125 SLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPV 204 (307)
Q Consensus 125 ~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (307)
+++..+..+++.+++++++||+|||++++.+.++.+++.+.+.+.. + . ...++..++ ..++..+..+.
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~----s------~-~~ll~~~~l-~g~~~~~~~~~ 668 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGN----S------E-SAMIALLCL-FGGLSIAAWNA 668 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHc----c------H-HHHHHHHHH-HHHHHHHHHHH
Confidence 4455566789999999999999999999887777776665543221 0 0 111121222 22223334556
Q ss_pred cceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCCCCCH
Q 021808 205 PWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTF 279 (307)
Q Consensus 205 ~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l 279 (307)
.+.+++|+||++.|+++.|+..+.+++|+++++.+...+... +...++.+++++.++++++ ..++|||+++.|
T Consensus 669 ~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll-~~~LPET~~~~l 741 (742)
T TIGR01299 669 LDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLL-ALKLPDTRGQVL 741 (742)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHH-HHhCCCCccccc
Confidence 678999999999999999999999999999988766544432 2234555555555555444 456799999865
No 7
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.93 E-value=1.5e-23 Score=191.17 Aligned_cols=272 Identities=32% Similarity=0.570 Sum_probs=175.1
Q ss_pred ccchHHHHHHHHHhccCCCChHHHHhcCCHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHhccccchhhhhcchhHHH
Q 021808 3 GVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIRL 82 (307)
Q Consensus 3 ~i~~~p~~~~~~~~~~~pESp~wL~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (307)
.+.+++.++..+..+++||||+|+..+++.+|+.+.+++.+..++.+++.++..+....+ +++.. ..+. ....
T Consensus 198 ~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~--~~~~ 270 (479)
T PRK10077 198 ASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHG--RKTGG---KLLM--FGVG 270 (479)
T ss_pred HHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHh--hhhhh---hhcc--hhHH
Confidence 445566666666778899999999999999998888877665443322222221110000 10001 1111 1111
Q ss_pred HHHHHHHHHHHHhhcCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHH
Q 021808 83 AFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIIS 162 (307)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~ 162 (307)
.....+....+.+..+++...+|.|.+.+..|.+... ............+++.+++++++||+|||++++.+....+++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~-~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~ 349 (479)
T PRK10077 271 VIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDI-ALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIG 349 (479)
T ss_pred HHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHH
Confidence 2222333344555666777778889998888876543 334444555567889999999999999999998877776666
Q ss_pred HHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHH
Q 021808 163 LVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLT 242 (307)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~ 242 (307)
.+.+...... ... ......++.++...+..+.++..+.+.+|++|++.|+++.|+....+++++++++..++.
T Consensus 350 ~~~l~~~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~ 422 (479)
T PRK10077 350 MFSLGTAFYT-QAP------GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPM 422 (479)
T ss_pred HHHHHHHHhc-Ccc------cHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 5554432211 110 112223333344444444557778899999999999999999999999999888777665
Q ss_pred HH------HHhCCchhHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHhhc
Q 021808 243 VA------ELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLEVEQMWKER 289 (307)
Q Consensus 243 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l~e~~~~~~~~ 289 (307)
.. +..+....+.+++.+++++.+..+++.||||++++||+++.+++.
T Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 475 (479)
T PRK10077 423 MDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEALWEPE 475 (479)
T ss_pred HHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHhhc
Confidence 44 223344456666666666666666778999999999999998743
No 8
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.92 E-value=1.3e-25 Score=192.28 Aligned_cols=268 Identities=22% Similarity=0.332 Sum_probs=171.1
Q ss_pred cccchHHHHHHHHHhccCCCChHHHHh-cCCHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHhccccc----hhhhhc
Q 021808 2 LGVSAVPAIIQFVLMLFMPESPRWLFM-KSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVR----YLDVFK 76 (307)
Q Consensus 2 ~~i~~~p~~~~~~~~~~~pESp~wL~~-~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 76 (307)
++++++|+++.++.++.||||+||-.. .++.+.|.+..++.... +.+..+ +.+...+.+.. +...|.
T Consensus 228 ~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~-----~~~~~~---~~~~~~~~~~~~~~~F~~~f~ 299 (538)
T KOG0252|consen 228 FGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSV-----DIEAES---TAESDVPPPSNSFGLFSRLFL 299 (538)
T ss_pred HHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhcccccccc-----ccchhh---ccccCCCCcccccchHHHHHH
Confidence 578999999999999999999999643 34445554333332221 111110 00111111111 223332
Q ss_pred chhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHHcCCCChHHHH--------HHHHHHHHHHHHHHHHHHHhhcccCc
Q 021808 77 SKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLAL--------LLSLAVAGTNAVGTIVGIYLIDHFGR 148 (307)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~Dr~Gr 148 (307)
.+ +-+. +.+.+..++..-..++....+...+++..|....+..+ ...++.....++|..+..+++|++||
T Consensus 300 ~~-hg~~-Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGR 377 (538)
T KOG0252|consen 300 RW-HGKH-LLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGR 377 (538)
T ss_pred HH-HHHH-HHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhh
Confidence 22 1122 33334444443445555556777788877654332221 22223333344577788899999999
Q ss_pred hHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHH
Q 021808 149 KKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATV 228 (307)
Q Consensus 149 R~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~ 228 (307)
|++.+.+++++.+..+.+.....+. . .... .++...+..++.+.|+++...++.+|.||+++|+++.|++.+.
T Consensus 378 k~iq~~GF~~~~i~~~~~~~~y~~~----~-~~~G--f~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~ 450 (538)
T KOG0252|consen 378 KYIQLMGFFIMTIFFFVIAGPYNQL----E-NTIG--FVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAAS 450 (538)
T ss_pred HHHHHhhHHHHHHHHHHHcCCcccc----c-ccCc--eeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHh
Confidence 9999988877766655544322211 1 1112 2334455566778899999999999999999999999999999
Q ss_pred HHHHHHHHHHhhHHHHH-----HhCCchhHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHh
Q 021808 229 NWISNLIVAQTFLTVAE-----LVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLEVEQMWK 287 (307)
Q Consensus 229 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l~e~~~~~~ 287 (307)
|.+|++++...+....+ ..+..+.++++++++.+..+. .+++||||||++||++...+
T Consensus 451 GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~-T~l~pEtk~~~leei~~e~~ 513 (538)
T KOG0252|consen 451 GKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILF-TLLIPETKGKSLEEISNEEE 513 (538)
T ss_pred ccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHhe-eEEeecccccCHHHhcChhh
Confidence 99999999988887776 445556778888888777654 56789999999999966544
No 9
>TIGR00898 2A0119 cation transport protein.
Probab=99.89 E-value=3.7e-22 Score=183.20 Aligned_cols=256 Identities=24% Similarity=0.341 Sum_probs=151.2
Q ss_pred ccchHHHHHHHHHhccCCCChHHHHhcCCHHHHHHHHHHhcCchhhHHHHHHHHHHHHHH-HHhccccchhhhhcchhHH
Q 021808 3 GVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEE-LRKKKTVRYLDVFKSKEIR 81 (307)
Q Consensus 3 ~i~~~p~~~~~~~~~~~pESp~wL~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 81 (307)
.+.++|.++..+..+++||||||+..++|.+|+.+.+++....+..+...+......+++ .+++++.+..+++++++.+
T Consensus 247 ~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 326 (505)
T TIGR00898 247 LAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLR 326 (505)
T ss_pred HHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHH
Confidence 345677777777778899999999999999999998887754332211111111110111 1111234677888888777
Q ss_pred HHHHHHHHHHHHHhhcCchhhHHhh-HHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHH
Q 021808 82 LAFLAGAGLQAFQQFTGINTVMYYS-PTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVI 160 (307)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~ 160 (307)
+..+......+.. ...+|. +......+.+ ............+++.++.++++||+|||+.+..+...++
T Consensus 327 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~ 396 (505)
T TIGR00898 327 KTTLCLMMLWFTT------AFSYYGLVLDLGNLGGN----IYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAG 396 (505)
T ss_pred HHHHHHHHHHHHH------HHHHHHHhccccccCCC----hHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 6655432221111 111222 2222333332 1233444555678889999999999999999887766666
Q ss_pred HHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhh
Q 021808 161 ISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTF 240 (307)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~ 240 (307)
++.+.+... . .. . .+.......+ ..+...+..+..+.+.+|++|++.|+++.|+....+++++++++...
T Consensus 397 ~~~l~~~~~--~-~~-~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~ 466 (505)
T TIGR00898 397 VALLLLLFV--P-VD-L-----YFLRTALAVL-GKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLV 466 (505)
T ss_pred HHHHHHHHc--C-CC-c-----hHHHHHHHHH-HHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHH
Confidence 655443321 1 10 0 0111111111 11222223345668889999999999999999999999988877655
Q ss_pred HHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCCCCCHHH
Q 021808 241 LTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLE 281 (307)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l~e 281 (307)
. .. ..+...++.+++++.+++.+. .+++|||++++++|
T Consensus 467 ~-~~-~~~~~~~~~~~~~~~~~~~~~-~~~lpet~~~~l~~ 504 (505)
T TIGR00898 467 Y-LG-EKWLFLPLVLFGGLALLAGIL-TLFLPETKGVPLPE 504 (505)
T ss_pred H-HH-HHHHhhHHHHHHHHHHHHHHH-HHcCcCCCCCCCCC
Confidence 4 22 222234555666655555443 46789999999876
No 10
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.85 E-value=7.9e-19 Score=159.39 Aligned_cols=276 Identities=39% Similarity=0.652 Sum_probs=166.7
Q ss_pred ccchHHHHHHHHHhccCCCChHHHHhcCCHHHHHHHHHHhcCchhhHHHH----HHHHHHHHHHHHhccccchhhhhcch
Q 021808 3 GVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEI----DHLSAAAEEELRKKKTVRYLDVFKSK 78 (307)
Q Consensus 3 ~i~~~p~~~~~~~~~~~pESp~wL~~~~~~~~a~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (307)
.+.+++.++.++..+++||+|+|+..+++.+++.+.++...+.+..+.+. +......+.+.+.. +..+.+.++..
T Consensus 200 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 278 (481)
T TIGR00879 200 GLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSV-QPSWGSLFSST 278 (481)
T ss_pred HHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhc-cccHHHHHhcC
Confidence 34455666666677889999999988888877776665543322111111 10011111111111 11122233211
Q ss_pred h-HHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHH
Q 021808 79 E-IRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLA 157 (307)
Q Consensus 79 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~ 157 (307)
+ .++..+....+..+......+...+|.|.+.+..|.+... .........+..+++.+++++++||+|||+.+..+..
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 357 (481)
T TIGR00879 279 RRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDH-AFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAA 357 (481)
T ss_pred chhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchH-HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 1 1222233333334444455556677888888888887643 4445555556678899999999999999999887766
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHH
Q 021808 158 GVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVA 237 (307)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~ 237 (307)
..+++.+.+........... +.......+....++...+..+..+..+.+.+|.+|++.|+++.|+......++.++++
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~ 436 (481)
T TIGR00879 358 GMAICLFVLGILGASFVTGS-SKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVG 436 (481)
T ss_pred HHHHHHHHHHHHhhcccCCc-ccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555544432211111100 00001222333334445556666677778889999999999999999998888888887
Q ss_pred HhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCCCCCHHH
Q 021808 238 QTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLE 281 (307)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l~e 281 (307)
.......+..+....+.+++++++++.+...++.||+|+++++|
T Consensus 437 ~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 480 (481)
T TIGR00879 437 FLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTLEE 480 (481)
T ss_pred HHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCCChhh
Confidence 77666666556555667777777777776667789999988765
No 11
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.83 E-value=1.4e-18 Score=160.07 Aligned_cols=265 Identities=19% Similarity=0.256 Sum_probs=160.6
Q ss_pred ccchHHHHHHHHHhccCCCChHHHHhcCCHHHHHHHHHHhcCchh----hHHHHHHHHH-HHHHHHHhccccchhhhhcc
Q 021808 3 GVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIAR----LEDEIDHLSA-AAEEELRKKKTVRYLDVFKS 77 (307)
Q Consensus 3 ~i~~~p~~~~~~~~~~~pESp~wL~~~~~~~~a~~~l~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 77 (307)
++..+|.++.++.++..||||||+..|||.+|+.+.+++..+.|+ .+++.+.... +.++....+++..+.++++.
T Consensus 238 ~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 317 (521)
T KOG0255|consen 238 WIISIPSGLFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRT 317 (521)
T ss_pred HHHHHHHHHHHHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcC
Confidence 556788887777777777999999999999999999999865431 1111111111 11111122233557888988
Q ss_pred hhHHHHHHHHHHHHHHHhhcCchhhHHhhHHH-HHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhH
Q 021808 78 KEIRLAFLAGAGLQAFQQFTGINTVMYYSPTI-VQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSL 156 (307)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~ 156 (307)
++.++.++........ ....+|...+ ....|.+ .............+.....++..|+.|||.....+.
T Consensus 318 ~~l~~~~~~~~~~~~~------~~~~y~gl~~~~~~lg~~----~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~ 387 (521)
T KOG0255|consen 318 PRLRYRTLYLLFIWFV------FSLVYYGLSLNVSGLGGN----IYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSL 387 (521)
T ss_pred HHHHHHHHHHHHHHHH------HhHHHHhhhhhhhhcCch----HHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHH
Confidence 8766665554332211 1222333222 2223332 122233333357778888899999999999998887
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHH
Q 021808 157 AGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIV 236 (307)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~ 236 (307)
....++++...+....... .....+.+++. ++...+.. ..+.+.+|++||.+|+++.|.....++++++++
T Consensus 388 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~-~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~a 458 (521)
T KOG0255|consen 388 FLAGIGLLLFGWLPDDLGG----WLHWILPLLGK----FFIGSAFN-LIFLYSAELIPTVVRNTAVGAISAAARLGSILA 458 (521)
T ss_pred HHHHHHHHHHHHhhccchh----HHHHHHHHHHH----HHHHHHHH-HHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777666554322110 01111112222 22222222 336889999999999999999999999999887
Q ss_pred HHhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHh
Q 021808 237 AQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLEVEQMWK 287 (307)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l~e~~~~~~ 287 (307)
+........ ......+..++....+...+...++|||+++++.|..+..+
T Consensus 459 p~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~~~ 508 (521)
T KOG0255|consen 459 PLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTLLDAE 508 (521)
T ss_pred HHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhHHHHH
Confidence 765543333 22223333345555566666668899999999987666655
No 12
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.80 E-value=7e-18 Score=154.24 Aligned_cols=242 Identities=14% Similarity=0.114 Sum_probs=124.5
Q ss_pred cccchHHHHHHHHHhccCCCChHHHHhcCCHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHhccccchhhhhcchhHH
Q 021808 2 LGVSAVPAIIQFVLMLFMPESPRWLFMKSDKEKAILVLSKIYDIARLEDEIDHLSAAAEEELRKKKTVRYLDVFKSKEIR 81 (307)
Q Consensus 2 ~~i~~~p~~~~~~~~~~~pESp~wL~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (307)
|.++++++++.++++.++||||+|+..+++.++.. .+ ..+++++.++.+++++ + +
T Consensus 195 f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~----------------------~~-~~~~~~~~~~~~~~~~-~-~ 249 (490)
T PRK10642 195 FFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGD----------------------RE-GLQDGPKVSFKEIATK-H-W 249 (490)
T ss_pred HHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhc----------------------cc-cccccccCCHHHHHHH-h-H
Confidence 44556666667777788999999974332211100 00 0000112244455543 2 2
Q ss_pred HHHHHHHHHHHHHhhcCchhhHHhhHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHH
Q 021808 82 LAFLAGAGLQAFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVI 160 (307)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~ 160 (307)
+.+.......+. ....++....|.|.+++. .|.+... .........+..+++.+++|+++||+|||+.+..+.....
T Consensus 250 ~~~~~~~~~~~~-~~~~~~~~~~~~p~~l~~~~g~s~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~ 327 (490)
T PRK10642 250 RSLLTCIGLVIA-TNVTYYMLLTYMPSYLSHNLHYSEDH-GVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALF 327 (490)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 222222222121 223445566678888754 5665443 3333444445567888899999999999998876654433
Q ss_pred HHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhh
Q 021808 161 ISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTF 240 (307)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~ 240 (307)
+..++....... . . ......+..+.......+ .+....+.+|+||++.|+++.|+....++.++.+++...
T Consensus 328 ~~~~~~~~~~~~-~--~-----~~~~~~~~~~~g~~~~~~-~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~ 398 (490)
T PRK10642 328 VLAIPAFILINS-N--V-----IGLIFAGLLMLAVILNCF-TGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLA 398 (490)
T ss_pred HHHHHHHHHHhC-C--C-----HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHH
Confidence 332222211111 1 0 011122222221111111 223346778999999999988887777776665555544
Q ss_pred HHHHHHhC-CchhHHHHHHHHHHHHHHHHhhccCCCCCCHH
Q 021808 241 LTVAELVG-TGATFLILAGIAVLAVVFVILFVPETQGLTFL 280 (307)
Q Consensus 241 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l~ 280 (307)
....+..+ ...++.+....++++.+ ..+++|||+++.++
T Consensus 399 g~l~~~~~~~~~~~~~~~~~~~i~~~-~~~~~pes~~~~~~ 438 (490)
T PRK10642 399 AWLVESTQNLMMPAYYLMVVAVIGLI-TGVTMKETANRPLK 438 (490)
T ss_pred HHHHHHhCCchHHHHHHHHHHHHHHH-HHHHhccccCCCCC
Confidence 44443333 22233333333333333 34567999887553
No 13
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.67 E-value=1.1e-14 Score=131.30 Aligned_cols=170 Identities=19% Similarity=0.126 Sum_probs=84.1
Q ss_pred chhhHHhhHHHHH-HcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCC
Q 021808 99 INTVMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSAS 177 (307)
Q Consensus 99 ~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (307)
++....|.|.++. ..|.+..+......+. .....++.++.|+++||+|||+.+..+....++...++.... .. ...
T Consensus 259 ~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~-~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~-~~-~~~ 335 (432)
T PRK10406 259 FYTFTTYMQKYLVNTAGMHANVASGIMTAA-LFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSAL-QN-VSS 335 (432)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHH-Hc-CCc
Confidence 3445567777765 4566554433333333 334567778889999999999987655443333322221111 11 100
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchh-HHHH
Q 021808 178 SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGAT-FLIL 256 (307)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 256 (307)
....+....+...... ...+..+.+.+|+||++.|+++.|+.+..++......+..........+.... +.+.
T Consensus 336 -----~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~ 409 (432)
T PRK10406 336 -----PYAAFGLVMCALLIVS-FYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYV 409 (432)
T ss_pred -----HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHH
Confidence 0111111111111111 11233457789999999999999998887665322222222223333342222 3333
Q ss_pred HHHHHHHHHHHHhhccCCCCCCH
Q 021808 257 AGIAVLAVVFVILFVPETQGLTF 279 (307)
Q Consensus 257 ~~~~~~~~~~~~~~lpet~~~~l 279 (307)
+...+++.+ ..++ .+++||+.
T Consensus 410 ~~~~~i~~~-~~~~-l~~~~~~~ 430 (432)
T PRK10406 410 TLMAVVAFL-VSLM-LHRKGKGM 430 (432)
T ss_pred HHHHHHHHH-HHHH-hhhccccc
Confidence 333333333 3333 56667653
No 14
>PRK09952 shikimate transporter; Provisional
Probab=99.66 E-value=1.4e-14 Score=130.78 Aligned_cols=167 Identities=16% Similarity=0.173 Sum_probs=87.7
Q ss_pred chhhHHhhHHHHH-HcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCC
Q 021808 99 INTVMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSAS 177 (307)
Q Consensus 99 ~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (307)
.+....|.|.+.+ ..|.+... ............+++.++.|+++||+|||+.+..+....+++.+++...... ..
T Consensus 266 ~~~~~~~~~~y~~~~~g~s~~~-~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~-~~-- 341 (438)
T PRK09952 266 MYIVTAFALNYSTQNLGLPREL-FLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEA-QS-- 341 (438)
T ss_pred HHHHHHHHHHHHHHhcCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHc-CC--
Confidence 3344456666654 45554432 2223334445567788899999999999998876655444433322221111 11
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHH-HHHHHHHHhhHHHHHHhC--CchhHH
Q 021808 178 SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNW-ISNLIVAQTFLTVAELVG--TGATFL 254 (307)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~ 254 (307)
. .+..+....+.... .....+..+.+.+|+||++.|+++.|+....+. +++.+++.....+.+..+ ....+.
T Consensus 342 --~--~~~~~~~~~l~~~~-~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~ 416 (438)
T PRK09952 342 --I--FWIVFFSIMLANIA-HDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAI 416 (438)
T ss_pred --h--HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHH
Confidence 0 11111112211111 112233456788999999999988888776654 555555554444444332 122334
Q ss_pred HHHHHHHHHHHHHHhhccCCC
Q 021808 255 ILAGIAVLAVVFVILFVPETQ 275 (307)
Q Consensus 255 ~~~~~~~~~~~~~~~~lpet~ 275 (307)
+.+++.+++.+. .+.+|||.
T Consensus 417 ~~~~~~~i~~v~-~~~~~~~~ 436 (438)
T PRK09952 417 YLLAGCLISAMT-ALLMKDNQ 436 (438)
T ss_pred HHHHHHHHHHHH-HHHccccc
Confidence 444444444443 34567754
No 15
>PRK15075 citrate-proton symporter; Provisional
Probab=99.48 E-value=7.4e-12 Score=112.92 Aligned_cols=178 Identities=14% Similarity=0.121 Sum_probs=94.0
Q ss_pred cCchhhHHhhHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCC
Q 021808 97 TGINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSS 175 (307)
Q Consensus 97 ~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~ 175 (307)
.+++....|.|.++++ .|.+..+ .........+..+++.+++|+++||+|||+.++.+....++..++..... ....
T Consensus 252 ~~~~~~~~~~p~~l~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~-~~~~ 329 (434)
T PRK15075 252 VSFYLITVYTPTFGKTVLHLSAAD-SLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWL-VAAP 329 (434)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH-HcCC
Confidence 3455666788888875 5775544 34445555556788999999999999999987765433322221111111 1111
Q ss_pred CCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHH-HHHHHHHhhHHHHHHhCCchhHH
Q 021808 176 ASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWI-SNLIVAQTFLTVAELVGTGATFL 254 (307)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 254 (307)
. ..... ....+....+. ...+..+.+.+|.+|++.|+++.|+..+.+.. ++.+++.......+..+......
T Consensus 330 -~----~~~~~-~~~~~~~~~~g-~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~~~~~ 402 (434)
T PRK15075 330 -S----FARML-AVELWLSFLYG-SYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDKAAPG 402 (434)
T ss_pred -c----hHHHH-HHHHHHHHHHH-HHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCchHHH
Confidence 1 11111 11111111111 22233446779999999999998887665553 24444444444444444322111
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCHHHHH
Q 021808 255 ILAGIAVLAVVFVILFVPETQGLTFLEVE 283 (307)
Q Consensus 255 ~~~~~~~~~~~~~~~~lpet~~~~l~e~~ 283 (307)
.+.....++.....+.+++.++.+++..|
T Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (434)
T PRK15075 403 YWLSFAAVCGLIATLVLYRRRGARLQAAE 431 (434)
T ss_pred HHHHHHHHHHHHHHHHhccccchhhhhhh
Confidence 12222222333344567788887777543
No 16
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.48 E-value=2.2e-12 Score=116.03 Aligned_cols=164 Identities=18% Similarity=0.182 Sum_probs=92.8
Q ss_pred hhhhhcchhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchH
Q 021808 71 YLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKK 150 (307)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~ 150 (307)
+.+.++++..+........ .+..+...+.+..+.|.+++..|.+....... .....+..+++.++.+++.||+|||+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~g~~~~g~l~dr~~~~~ 297 (426)
T PRK12307 221 MKGLFNRAQFPLTLCVFIV--LFSIFGANWPIFGLLPTYLAGEGFDTGVVSNL-MTAAAFGTVLGNIVWGLCADRIGLKK 297 (426)
T ss_pred HHHHHhhchHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 4456666555443322111 11112222234456777777777765444433 33444557888999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHH-HHHhcCcccccceeecccCCcccchhhhhHHHHHH
Q 021808 151 LALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYI-AFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVN 229 (307)
Q Consensus 151 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~ 229 (307)
++..+....++..+.+... . .. . . ......++. .....+..+..+.+..|.+|++.|+++.|+....+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~--~-~~----~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 366 (426)
T PRK12307 298 TFSIGLLMSFLFIFPLFRI--P-QD----N---Y-LLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLA 366 (426)
T ss_pred HHHHHHHHHHHHHHHHHHH--c-cc----c---H-HHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHH
Confidence 8876655544433322211 1 10 0 1 111111111 12222333445567789999999999999988888
Q ss_pred HHHHHHHHHhhHHHHHHhC
Q 021808 230 WISNLIVAQTFLTVAELVG 248 (307)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~ 248 (307)
.+++.+++.....+.+..+
T Consensus 367 ~~~~~~gp~~~g~l~~~~g 385 (426)
T PRK12307 367 ATSGTFNSMAATWLGITMG 385 (426)
T ss_pred hHHHHHHHHHHHHHHHccc
Confidence 8888776665544444443
No 17
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.44 E-value=3.8e-12 Score=114.76 Aligned_cols=167 Identities=14% Similarity=0.180 Sum_probs=92.5
Q ss_pred hhhHHhhHHHHH-HcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhccc--Cch-HHHHHhHHHHHHHHHHHHHHHhhcCC
Q 021808 100 NTVMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHF--GRK-KLALSSLAGVIISLVLLSWAFISGSS 175 (307)
Q Consensus 100 ~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~--GrR-~~l~~~~~~~~~~~~~~~~~~~~~~~ 175 (307)
..+..|.|.++. ..|.+..+... ........+.++.++.|+++||+ ++| ...........+..+.+ ... . ..
T Consensus 260 ~~~~~~~p~~l~~~~g~s~~~a~~-~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~-~~~-~-~~ 335 (434)
T PRK11663 260 AAINDWGNLYMSETLGVDLVTANS-AVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSL-WLM-P-FA 335 (434)
T ss_pred HHHHHHHHHHHHhccCCCHHHHHH-HHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHH-HHc-c-cc
Confidence 344456777774 55776554333 33344455788999999999999 333 33222111111111111 111 1 11
Q ss_pred CCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHH
Q 021808 176 ASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLI 255 (307)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (307)
+. . .........+++..+.......+.+|.+|++.|+++.|+....+.++..+++.....+.+..+....+..
T Consensus 336 ---~~---~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~ 408 (434)
T PRK11663 336 ---SY---V-MQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVV 408 (434)
T ss_pred ---cH---H-HHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHH
Confidence 00 1 1111111111222222222234568999999999999999999999998887777666666665556666
Q ss_pred HHHHHHHHHHHHHhhccCCCCC
Q 021808 256 LAGIAVLAVVFVILFVPETQGL 277 (307)
Q Consensus 256 ~~~~~~~~~~~~~~~lpet~~~ 277 (307)
.+.+.++.++....+.++++++
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~ 430 (434)
T PRK11663 409 ISIAAGISALLLLPFLNAQAPR 430 (434)
T ss_pred HHHHHHHHHHHHHHHHhhhchh
Confidence 6666666655555555555544
No 18
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.42 E-value=1.2e-11 Score=111.01 Aligned_cols=169 Identities=19% Similarity=0.152 Sum_probs=105.5
Q ss_pred HhhHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCch
Q 021808 104 YYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVY 182 (307)
Q Consensus 104 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (307)
.+.|.+.++ .|.+....... ........+++.++.+++.||.++|+.+..+....++..+.+.. ..+
T Consensus 244 ~~~p~~~~~~~g~~~~~~g~~-~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~------~~~----- 311 (417)
T PRK10489 244 VLYPALADEVWQMGAAQIGLL-YAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGL------MPM----- 311 (417)
T ss_pred HhhHHHHHhccCCChhHhHHH-HHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHc------cch-----
Confidence 456666666 66655444333 33344456788889999999987777666554444333332211 010
Q ss_pred hHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHH
Q 021808 183 GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVL 262 (307)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (307)
.+...++..++.. ......+..+++..|.+|.+.|+++.|+.......+..+++.....+.+..+....+.+.+.+..+
T Consensus 312 ~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~ 390 (417)
T PRK10489 312 WILAVLCLALFGY-LSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLI 390 (417)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHH
Confidence 1111222222111 111122344567789999999999999988888888888877777777666654555566666555
Q ss_pred HHHHHHhhccCCCCCCHHHHHHH
Q 021808 263 AVVFVILFVPETQGLTFLEVEQM 285 (307)
Q Consensus 263 ~~~~~~~~lpet~~~~l~e~~~~ 285 (307)
..++.....||+|++++||+|++
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~ 413 (417)
T PRK10489 391 IGVLLLLVLGELRRFRQTPPEVD 413 (417)
T ss_pred HHHHHHHhcccccccccccccCC
Confidence 55666677899999999998765
No 19
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.41 E-value=3.4e-11 Score=113.82 Aligned_cols=125 Identities=18% Similarity=0.122 Sum_probs=80.4
Q ss_pred hhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCC
Q 021808 101 TVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 180 (307)
Q Consensus 101 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (307)
.+....|.+....+.+....+...+.. .+..+++.+++|+++||+|||+.++++.++.+++.+...+. .+
T Consensus 185 ~is~ilp~i~~~~gls~~~~g~l~s~~-~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa---~s------ 254 (742)
T TIGR01299 185 VVGFVLPSAEKDLCIPDSGKGMLGLIV-YLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFV---QG------ 254 (742)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH---hh------
Confidence 344556777777887765555444444 44578999999999999999999887766555544443321 00
Q ss_pred chhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHH
Q 021808 181 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQ 238 (307)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~ 238 (307)
+ +..+++. ++.++...+..+..+++++|.+|.+.|+...++......+|.+++..
T Consensus 255 -~-~~llv~R-~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~ 309 (742)
T TIGR01299 255 -Y-GFFLFCR-LLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAA 309 (742)
T ss_pred -H-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 1122222 22222233345677789999999999999888877776666655543
No 20
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.40 E-value=1.2e-11 Score=108.95 Aligned_cols=179 Identities=11% Similarity=0.070 Sum_probs=95.2
Q ss_pred hhhhhcchhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCch-
Q 021808 71 YLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRK- 149 (307)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR- 149 (307)
+.++++++..+...+.. +......+.+..|.|++++..|.+. ..... .....+.+.+..++++||+.||
T Consensus 185 ~~~ll~~~~~~~~~~~~-----~~~~~~~~~~~~wlp~~L~~~g~s~-~~~~~----~~l~~~~g~~g~~~~~d~~~r~~ 254 (368)
T TIGR00903 185 FGALAGRKDLWIIGAIL-----GFGVALFDNLAIWLEAALRPAGLED-IAGDA----VALAILAGLIGVAVIPDRVARAG 254 (368)
T ss_pred HHHHHcChhHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHCCCCh-HHHHH----HHHHHHHHHHHHHHhhHHhhhhh
Confidence 34567766654433221 2223344566678999998877653 22222 2222334445567888888654
Q ss_pred --HHHHH-hHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHH
Q 021808 150 --KLALS-SLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSA 226 (307)
Q Consensus 150 --~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~ 226 (307)
+.... .....++....+ ..... . ...+....+ ..++..+..+..+.+.+|++|++.|+++.|+..
T Consensus 255 ~r~~~~~~~~~~~a~~~~~~----~~~~~--~-----~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~ 322 (368)
T TIGR00903 255 LRSIYIRAAALLIAAFFLAL----AFELN--R-----LALFAFIGI-AGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIG 322 (368)
T ss_pred hHHHHHHHHHHHHHHHHHHH----HHccc--c-----HHHHHHHHH-HHHhhhhhHHHHHHHHHHhcchhhcCcccchhh
Confidence 33222 222222111111 11111 0 111222222 222333334456678899999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCC
Q 021808 227 TVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPET 274 (307)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet 274 (307)
..++++++.++........ +....|..++...+++.+.. ..+|+.
T Consensus 323 ~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~-~~~~~~ 367 (368)
T TIGR00903 323 FTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIA-LLLPND 367 (368)
T ss_pred HHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHH-HhCCCC
Confidence 9999998877665544442 33345666666666655544 344543
No 21
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.39 E-value=3.5e-11 Score=109.15 Aligned_cols=165 Identities=15% Similarity=0.261 Sum_probs=85.5
Q ss_pred hhhHHhhHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHHHHHHhhccc--CchHHHHH-hHHHHHHHHHHHHHHHhhcCC
Q 021808 100 NTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHF--GRKKLALS-SLAGVIISLVLLSWAFISGSS 175 (307)
Q Consensus 100 ~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~--GrR~~l~~-~~~~~~~~~~~~~~~~~~~~~ 175 (307)
+....|.|.++++ .|.+..... ..........+++.+++|+++||+ |||..... ......+..+ ..+. .....
T Consensus 270 ~~~~~~~P~~l~~~~g~s~~~~~-~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~-~~~~-~~~~~ 346 (452)
T PRK11273 270 YGILDWSPTYLKEVKHFALDKSS-WAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATI-VYWL-NPAGN 346 (452)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHH-HHHH-hcccC
Confidence 3445678888876 466544433 334444455678899999999999 55543322 1111111111 1111 11100
Q ss_pred CCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHH-HHHhhHHHHHHhCCchhHH
Q 021808 176 ASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLI-VAQTFLTVAELVGTGATFL 254 (307)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 254 (307)
. ....++..++. ....+.......+..|.+|++.|+++.|+....+.+++.+ ++.......+..+....|.
T Consensus 347 ------~-~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~ 418 (452)
T PRK11273 347 ------P-TVDMACMIVIG-FLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFM 418 (452)
T ss_pred ------h-HHHHHHHHHHH-HHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHH
Confidence 0 11111111111 1111111122345679999999999999988877776544 4444445555556555666
Q ss_pred HHHHHHHHHHHHHH-hhccCCC
Q 021808 255 ILAGIAVLAVVFVI-LFVPETQ 275 (307)
Q Consensus 255 ~~~~~~~~~~~~~~-~~lpet~ 275 (307)
+.+.+++++++... +..+|+|
T Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~ 440 (452)
T PRK11273 419 VMIGGSILAVILLIVVMIGEKR 440 (452)
T ss_pred HHHHHHHHHHHHHHHHhccccc
Confidence 66655555554433 3345554
No 22
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.39 E-value=5.8e-11 Score=108.91 Aligned_cols=141 Identities=18% Similarity=0.233 Sum_probs=83.8
Q ss_pred hHHhhHHHHH-HcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCC
Q 021808 102 VMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 180 (307)
Q Consensus 102 ~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (307)
...+.|.+++ ..|.+..+.... .....+..+++.+++++++||+|||+.+..+.....+..+.+.. . ...
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~-~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~--~-~~~----- 364 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANV-LFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFA--I-GGA----- 364 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhh--c-ccc-----
Confidence 4456777774 667766554444 44445557889999999999999999877654443333222111 1 100
Q ss_pred chhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhH
Q 021808 181 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATF 253 (307)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (307)
..+ ..............+..+..+.+.+|.+|++.|+++.|+....+.++..+++.....+.+..+....+
T Consensus 365 -~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~ 435 (496)
T PRK03893 365 -NVW-VLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTAL 435 (496)
T ss_pred -HHH-HHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHH
Confidence 011 11111111122233344555567889999999999999988888888777766555555444433333
No 23
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.38 E-value=3.1e-11 Score=107.84 Aligned_cols=132 Identities=20% Similarity=0.286 Sum_probs=82.5
Q ss_pred hhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCC
Q 021808 101 TVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 180 (307)
Q Consensus 101 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (307)
....|.|.+.+..|.+....... .....+..+++.++.++++||+|||+.+..+....+++.+.+.. . . +
T Consensus 238 ~~~~~~p~~~~~~g~s~~~~~~~-~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~---~--~-~--- 307 (406)
T PRK11551 238 FLLNWLPSLLVGQGLSRSQAGLV-QIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAA---A--P-S--- 307 (406)
T ss_pred HHHHHHHHHHHhCCCChhhhhHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh---c--C-c---
Confidence 44456788888888766554443 33444557889999999999999999887654443333322211 1 0 0
Q ss_pred chhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHH
Q 021808 181 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAE 245 (307)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~ 245 (307)
.+..... ..+......+..+..+.+.+|.+|++.|+++.|+....+.++..+++.....+.+
T Consensus 308 --~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~ 369 (406)
T PRK11551 308 --FAGMLLA-GFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLA 369 (406)
T ss_pred --HHHHHHH-HHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhc
Confidence 0111111 1122222223345556788999999999999999999888888777666555444
No 24
>TIGR00895 2A0115 benzoate transport.
Probab=99.37 E-value=3.2e-11 Score=106.95 Aligned_cols=164 Identities=21% Similarity=0.181 Sum_probs=103.0
Q ss_pred hhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCC
Q 021808 100 NTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSS 179 (307)
Q Consensus 100 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (307)
....++.|.+.+..|.+..+.... .........++.++.|+++||+|||+.+..+....+++.+..... .+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~---~~----- 104 (398)
T TIGR00895 34 AAMGFAAPAISAEWGLDPVQLGFL-FSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALA---TN----- 104 (398)
T ss_pred HHHHhhHHHHhhccCCCHHHHHHH-HHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHc---cc-----
Confidence 344566788888888766554443 334444568889999999999999999887766555554443221 10
Q ss_pred CchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHH
Q 021808 180 GVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGI 259 (307)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (307)
. +..++.. ++.+.......+....+.+|.+|.+.|+++.|+......++..+++.....+.+..++...+.+.+.+
T Consensus 105 --~-~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~ 180 (398)
T TIGR00895 105 --V-TQLLILR-FLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIA 180 (398)
T ss_pred --h-HHHHHHH-HHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhH
Confidence 0 1122222 22222233344556688899999999999999988877777777665554444444544455555445
Q ss_pred HHHHHHHHHhhccCCCC
Q 021808 260 AVLAVVFVILFVPETQG 276 (307)
Q Consensus 260 ~~~~~~~~~~~lpet~~ 276 (307)
..+..+...+++||+..
T Consensus 181 ~~~~~~~~~~~~~~~~~ 197 (398)
T TIGR00895 181 PLLLLLLLMRFLPESID 197 (398)
T ss_pred HHHHHHHHHHhCCCCCh
Confidence 55555555667788743
No 25
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.37 E-value=7.3e-11 Score=105.05 Aligned_cols=133 Identities=19% Similarity=0.186 Sum_probs=80.8
Q ss_pred HhhHHHH-HHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCch
Q 021808 104 YYSPTIV-QMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVY 182 (307)
Q Consensus 104 ~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (307)
.+.|.++ +..|.+..+... ......+..+++.++.+++.||+|||+.+..+....++...... . . ...
T Consensus 259 ~~~~~~~~~~~g~s~~~~~~-~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~-~-~-~~~------- 327 (405)
T TIGR00891 259 DLLPTYLKADLGLSPHTVAN-IVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVF-A-I-GAN------- 327 (405)
T ss_pred hhhHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHH-H-h-CCc-------
Confidence 3445554 455665544433 34444555788999999999999999988766544322222211 1 1 110
Q ss_pred hHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhC
Q 021808 183 GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 248 (307)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (307)
.+....+..+ ......+..+..+.+.+|.+|++.|+++.|+....+.++..+++.....+.+..+
T Consensus 328 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g 392 (405)
T TIGR00891 328 VAVLGLGLFF-QQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLD 392 (405)
T ss_pred hHHHHHHHHH-HHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1111222111 2222333445556788999999999999999988888888887776666665554
No 26
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.34 E-value=7.4e-11 Score=105.68 Aligned_cols=168 Identities=12% Similarity=0.076 Sum_probs=101.2
Q ss_pred hcCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCC
Q 021808 96 FTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSS 175 (307)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~ 175 (307)
...-....+..|.+.++.+.+..+.....+.. .....++.+..|+++||+|||+++..+.....+........ .+
T Consensus 21 ~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~-~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~---~~- 95 (412)
T TIGR02332 21 FLDRINIGFAGLTMGKDLGLSATMFGLAATLF-YAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFA---TG- 95 (412)
T ss_pred HhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHH-HHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh---cC-
Confidence 33444445556767778887766655544443 34467888999999999999999887766665555444321 11
Q ss_pred CCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHH------HhCC
Q 021808 176 ASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAE------LVGT 249 (307)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~ 249 (307)
. + .+.....+.+....+..+....+.+|.+|.+.|++..|+......++..++......... ..++
T Consensus 96 ------~-~-~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gw 167 (412)
T TIGR02332 96 ------P-E-SLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGW 167 (412)
T ss_pred ------H-H-HHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccch
Confidence 0 1 111112222222223344545677999999999999998877766666665544333322 1244
Q ss_pred chhHHHHHHHHHHHHHHHHhhccCCCC
Q 021808 250 GATFLILAGIAVLAVVFVILFVPETQG 276 (307)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~lpet~~ 276 (307)
...+.+.+...++..++.++++||++.
T Consensus 168 r~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 168 QWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred hHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 456666555555555555677888764
No 27
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.33 E-value=4.5e-11 Score=105.66 Aligned_cols=184 Identities=20% Similarity=0.332 Sum_probs=96.3
Q ss_pred chhhhhcchhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 021808 70 RYLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGR 148 (307)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~Gr 148 (307)
+..+.+++++.+...+.. +...........+.|.++++ .+.+..+ .........+..+++.++.++++||+||
T Consensus 207 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 280 (399)
T TIGR00893 207 QIKELLKDRRVWGLALGQ-----FLVNIGLGFFLTWFPTYLVQERGLSILE-AGFMASLPGIVGFIGMILGGRLSDLLLR 280 (399)
T ss_pred chHHHhcCHHHHHHHHHH-----HHHHhHHHHHHHHHHHHHHHHhcccHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 355666666554332221 11122333444566666654 4554433 3334444555678899999999999999
Q ss_pred hHHHHH-hHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHH
Q 021808 149 KKLALS-SLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSAT 227 (307)
Q Consensus 149 R~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~ 227 (307)
|+.... ......+..+............ .. .+ ...... .......+..+..+.+.+|.+|++.|+++.|+...
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 354 (399)
T TIGR00893 281 RGKSLVFARKTAIIAGLVLSLLMFATNYV--NI--PY-AALALV-ALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINS 354 (399)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHhccc--hh--HH-HHHHHH-HHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHH
Confidence 962111 1111111111111111111100 00 11 111111 12222333566777889999999999999999999
Q ss_pred HHHHHHHHHHHhhHHHHHHhC-CchhHHHHHHHHHHHHH
Q 021808 228 VNWISNLIVAQTFLTVAELVG-TGATFLILAGIAVLAVV 265 (307)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 265 (307)
...++..+++.....+.+..+ ....+.+.+.+.+++.+
T Consensus 355 ~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 393 (399)
T TIGR00893 355 LGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGAL 393 (399)
T ss_pred HHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHH
Confidence 888888877766655554444 33344444444444443
No 28
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.33 E-value=6.2e-11 Score=107.95 Aligned_cols=135 Identities=15% Similarity=0.187 Sum_probs=74.5
Q ss_pred hhhHHhhHHHHH-HcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCC
Q 021808 100 NTVMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASS 178 (307)
Q Consensus 100 ~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (307)
+....|.|.+++ ..|.+..+... .........+++.+++|+++||+|||+.+........+....+. .....+
T Consensus 275 ~~~~~~~p~yl~~~~g~s~~~a~~-~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~--~~~~~~--- 348 (467)
T PRK09556 275 IGIDNWSPVYAFQELGFSKEDAIN-TFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGV--YQHATS--- 348 (467)
T ss_pred HHHHHHHHHHHHHccCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHH--HHhcCc---
Confidence 345567887775 46776554443 34444455789999999999999999876544332222221111 111111
Q ss_pred CCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHH-HHHHHHHhhHHHHH
Q 021808 179 SGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWI-SNLIVAQTFLTVAE 245 (307)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~-~~~~~~~~~~~~~~ 245 (307)
.....+...++ +....+.....+.+..|.+|++.|+++.|+....+.+ +..+++.....+.+
T Consensus 349 ----~~~~~~~~~~~-G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 349 ----EYMYLASLFAL-GFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred ----HHHHHHHHHHH-HHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 01111111111 1111122222234556999999999999999888875 54555444444444
No 29
>TIGR00895 2A0115 benzoate transport.
Probab=99.31 E-value=7.5e-11 Score=104.60 Aligned_cols=128 Identities=20% Similarity=0.186 Sum_probs=75.3
Q ss_pred CchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCC
Q 021808 98 GINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSAS 177 (307)
Q Consensus 98 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (307)
..+....+.|.+.+..+.+..... .......+..+++.++.++++||+|||+..... ...++....+.. ... .
T Consensus 265 ~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~-~-- 337 (398)
T TIGR00895 265 GVYFLTNWLPKLMVELGFSLSLAA-TGGALFNFGGVIGSIIFGWLADRLGPRVTALLL-LLGAVFAVLVGS--TLF-S-- 337 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH-HHHHHHHHHHHH--Hhh-C--
Confidence 344455677777777777655443 334444556788999999999999999544432 222222222211 111 1
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHH
Q 021808 178 SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQ 238 (307)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~ 238 (307)
.........+. .....+..+..+.+.+|.+|++.|+++.|+....+.++..+++.
T Consensus 338 -----~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~ 392 (398)
T TIGR00895 338 -----PTLLLLLGAIA-GFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPI 392 (398)
T ss_pred -----HHHHHHHHHHH-HHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01111222221 22222334455678899999999999999988887777766543
No 30
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.29 E-value=2.6e-10 Score=100.92 Aligned_cols=141 Identities=14% Similarity=0.086 Sum_probs=75.6
Q ss_pred chhhHHhhHHHH-HHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCC
Q 021808 99 INTVMYYSPTIV-QMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSAS 177 (307)
Q Consensus 99 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (307)
.+....+.|.+. +..|.+..... .......+...++.++.++++||+|||+.+..+.....+..............
T Consensus 235 ~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 311 (394)
T TIGR00883 235 FYLITTYLPTYLTQTLGLSANSAL-LVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGS-- 311 (394)
T ss_pred HHHHHHHHHHHHHHhcCCChhHHH-HHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCc--
Confidence 344455677777 44566554433 33444455578888999999999999998764433333322221111111110
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHH-HHHHHHHHHhhHHHHHHhC
Q 021808 178 SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVN-WISNLIVAQTFLTVAELVG 248 (307)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~ 248 (307)
.+.......+.. .......+....+.+|.+|++.|+++.|+..... .++..+++.....+.+..+
T Consensus 312 -----~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 312 -----FTLFFFLVLGLA-LIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred -----hHHHHHHHHHHH-HHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC
Confidence 111222222221 1122233445678899999999998888754443 3455455444444444444
No 31
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.29 E-value=2.9e-10 Score=102.57 Aligned_cols=161 Identities=19% Similarity=0.164 Sum_probs=99.7
Q ss_pred hhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCC
Q 021808 101 TVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 180 (307)
Q Consensus 101 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (307)
....+.|.+.++.|.+..+.....+ .......++.++.|+++||+|||+++..+....+++.+...... +
T Consensus 41 ~~~~~~~~~~~~~g~s~~~~g~~~~-~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~----~----- 110 (434)
T PRK11663 41 SFNAAMPEMLADLGLSRSDIGLLAT-LFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSS----S----- 110 (434)
T ss_pred hHHHhhHHHHHhcCCCHHHHHHHHH-HHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHh----H-----
Confidence 4456678888888887665554444 44445688999999999999999998877776666655443221 0
Q ss_pred chhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHH
Q 021808 181 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIA 260 (307)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (307)
+ +.......+ .........+....+.+|.+|.+.|+++.|+......++..+++.....+....++...+.+.+.+.
T Consensus 111 -~-~~l~~~~~l-~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~ 187 (434)
T PRK11663 111 -L-WAFALLWVL-NAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIA 187 (434)
T ss_pred -H-HHHHHHHHH-HHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 0 111111111 1111112234445778999999999999999888877777776655444444455555555555544
Q ss_pred HHHHHHHHhhccCC
Q 021808 261 VLAVVFVILFVPET 274 (307)
Q Consensus 261 ~~~~~~~~~~lpet 274 (307)
++..+...+++||+
T Consensus 188 ~~~~~~~~~~~~~~ 201 (434)
T PRK11663 188 IVVGLFLCWRLRDK 201 (434)
T ss_pred HHHHHHHHHHcCCC
Confidence 44444444556664
No 32
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.29 E-value=6.2e-10 Score=102.32 Aligned_cols=111 Identities=17% Similarity=0.099 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcc
Q 021808 123 LLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMG 202 (307)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (307)
.......+..+++.++.|+++||+|||+++..+.++..++.+..... . +.. . .......+++.. +.+....+..
T Consensus 60 ~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~--~-~~~-~-~~~~~~~~~~r~-l~G~~~g~~~ 133 (502)
T TIGR00887 60 AVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLS--P-GSS-P-KSVMATLCFWRF-WLGVGIGGDY 133 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc--c-Ccc-c-chHHHHHHHHHH-HHHHHHhhhh
Confidence 44555555678899999999999999999887766666655443321 1 100 0 000112222222 2333333445
Q ss_pred cccceeecccCCcccchhhhhHHHHHHHHHHHHHHHh
Q 021808 203 PVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQT 239 (307)
Q Consensus 203 ~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~ 239 (307)
+....+.+|.+|++.|+++.++......+|..++...
T Consensus 134 ~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~ 170 (502)
T TIGR00887 134 PLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIV 170 (502)
T ss_pred HHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6667899999999999999998887777776655443
No 33
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.28 E-value=1.8e-10 Score=104.55 Aligned_cols=163 Identities=13% Similarity=0.115 Sum_probs=89.7
Q ss_pred HHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCch
Q 021808 103 MYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVY 182 (307)
Q Consensus 103 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (307)
....|.+.+. +.+..+.... .....+...++.++.|+++||+|||++++.+..+.++..+........ .. . .
T Consensus 49 ~~~~p~l~~~-g~s~~~~g~~-~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~--~~---~-~ 120 (452)
T PRK11273 49 ALAMPYLVEQ-GFSRGDLGFA-LSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWA--TS---S-I 120 (452)
T ss_pred HHhhHHHHHc-CCCHHHHHHH-HHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcc--cc---c-H
Confidence 3456666655 7766554443 444455578899999999999999999887776666655544322110 00 0 1
Q ss_pred hHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhh-HHHHHHhCCchhHHHHHHHHH
Q 021808 183 GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTF-LTVAELVGTGATFLILAGIAV 261 (307)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 261 (307)
+..++...+. ........+.......|.+|++.|+++.|+......++..+.+... .......++...+.+.+.+.+
T Consensus 121 -~~~~~~~~l~-gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~ 198 (452)
T PRK11273 121 -AVMFVLLFLC-GWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAI 198 (452)
T ss_pred -HHHHHHHHHH-HHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 1112222222 2222222233335668999999999998886665555543222221 111112233445555555555
Q ss_pred HHHHHHHhhccCCC
Q 021808 262 LAVVFVILFVPETQ 275 (307)
Q Consensus 262 ~~~~~~~~~lpet~ 275 (307)
+..++..+++||+.
T Consensus 199 ~~~~l~~~~~~~~~ 212 (452)
T PRK11273 199 LVALFAFAMMRDTP 212 (452)
T ss_pred HHHHHHHHHccCCH
Confidence 55555566677764
No 34
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.28 E-value=8.6e-11 Score=103.89 Aligned_cols=163 Identities=15% Similarity=0.132 Sum_probs=102.7
Q ss_pred hhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCC
Q 021808 101 TVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 180 (307)
Q Consensus 101 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (307)
......|.+.+..|.+..+.... .........++.++.|+++||+|||+.+..+....++......... +
T Consensus 12 ~~~~~~~~~~~~~g~s~~~~~~~-~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~---~------ 81 (399)
T TIGR00893 12 NLSFAAPMLQEDLGLSAAQYGYV-FSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG---A------ 81 (399)
T ss_pred hhhHhHHHHHHhhCCChhhHHHH-HHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc---C------
Confidence 34455677777888876665444 4444455788999999999999999998877666555554443221 0
Q ss_pred chhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHH
Q 021808 181 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIA 260 (307)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (307)
.+...++..+ .+.......+....+.+|.+|++.|++..|+......++..+++.....+....++...+.+.+.+.
T Consensus 82 --~~~~~~~~~l-~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 158 (399)
T TIGR00893 82 --YVSLYILRVL-LGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLG 158 (399)
T ss_pred --HHHHHHHHHH-HHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHH
Confidence 0112222222 2222233345556788999999999999999888888887777655544455555555566555555
Q ss_pred HHHHHHHHhhccCCCC
Q 021808 261 VLAVVFVILFVPETQG 276 (307)
Q Consensus 261 ~~~~~~~~~~lpet~~ 276 (307)
++..+...++.||++.
T Consensus 159 ~~~~~~~~~~~~~~~~ 174 (399)
T TIGR00893 159 IIWGVLWLKFIPDPPQ 174 (399)
T ss_pred HHHHHHhhheecCCCC
Confidence 5555544555666544
No 35
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.28 E-value=7e-11 Score=106.72 Aligned_cols=169 Identities=13% Similarity=0.222 Sum_probs=89.2
Q ss_pred hhhHHhhHHHHHHc-CCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCC
Q 021808 100 NTVMYYSPTIVQMA-GFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASS 178 (307)
Q Consensus 100 ~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (307)
+....|.|.++++. |.+... +........+.++++.+++++++||+|+++....+........+........ ....
T Consensus 268 ~~~~~~~p~~l~~~~g~s~~~-~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~- 344 (438)
T TIGR00712 268 YGVLDWSPTYLKEVKHFALDK-SSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMN-PAGN- 344 (438)
T ss_pred HHHHHhHHHHHHHccCCChhh-HHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhc-CCCc-
Confidence 44556778887764 555443 3334445555678899999999999965432222222211111111111111 1100
Q ss_pred CCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHH-HHHHHhhHHHHHHhCCchhHHHHH
Q 021808 179 SGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISN-LIVAQTFLTVAELVGTGATFLILA 257 (307)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 257 (307)
. +......... +....+..........|.+|++.|+++.|+....+..++ .+++.....+.+..+....+.+..
T Consensus 345 -~---~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~ 419 (438)
T TIGR00712 345 -P---LVDMICMIVI-GFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMI 419 (438)
T ss_pred -h---HHHHHHHHHH-HHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHH
Confidence 0 1111111111 111111111212356799999999999999887777664 345555555555555445555666
Q ss_pred HHHHHHHHHHHhhccCCCC
Q 021808 258 GIAVLAVVFVILFVPETQG 276 (307)
Q Consensus 258 ~~~~~~~~~~~~~lpet~~ 276 (307)
++..++.+...+..||.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~ 438 (438)
T TIGR00712 420 GGSILAVILLIVVMIGEKR 438 (438)
T ss_pred HHHHHHHHHHHHHHhhccC
Confidence 6666666666667788663
No 36
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.28 E-value=2.2e-10 Score=102.81 Aligned_cols=143 Identities=15% Similarity=0.163 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccc
Q 021808 127 AVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPW 206 (307)
Q Consensus 127 ~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (307)
...+..+++.++.++++||+|||+++..+....++....+... . .. ... .+...+...+...... ...+...
T Consensus 259 ~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~--~-~~--~~~--~~~l~l~~~l~g~~~~-~~~~~~~ 330 (418)
T TIGR00889 259 LSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYG--D-PE--YFG--YALLFLSMIVYGCAFD-FFNISGS 330 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc--C-cc--hhh--HHHHHHHHHHHHHHHH-HHHHHHH
Confidence 3334466778899999999999999887766655554333221 0 00 000 0111111222211111 2233434
Q ss_pred eeecccCCcccchhhhhHHH-HHHHHHHHHHHHhhHHHHHHhC------CchhHHHHHHHHHHHHHHHHhhccCCCCC
Q 021808 207 TLNSEVYPEQYRGICGGMSA-TVNWISNLIVAQTFLTVAELVG------TGATFLILAGIAVLAVVFVILFVPETQGL 277 (307)
Q Consensus 207 ~~~~ElfPt~~R~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~lpet~~~ 277 (307)
.+.+|.+|++.|+++.|+.. ....++..+++.....+.+..+ ....+.+.+.+..+..+...++.||+++.
T Consensus 331 ~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 331 VFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 67899999999999999986 4455677666666555555433 22345555555566666667788988765
No 37
>PRK03545 putative arabinose transporter; Provisional
Probab=99.28 E-value=3.8e-10 Score=100.33 Aligned_cols=159 Identities=21% Similarity=0.212 Sum_probs=97.6
Q ss_pred HhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchh
Q 021808 104 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 183 (307)
Q Consensus 104 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (307)
...|.+.++.+.+..+.....+. ......++.+..|.++||+|||+++..+....++..+..... . + +
T Consensus 30 ~~~~~l~~~~~~s~~~~g~~~~~-~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~---~-~------~- 97 (390)
T PRK03545 30 GLLSDIAQSFHMQTAQVGLMLTI-YAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALA---W-N------F- 97 (390)
T ss_pred cchHHHHhHcCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHh---c-c------H-
Confidence 34577788888877665544443 333456778888999999999999988766666655444321 1 0 1
Q ss_pred HHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHH
Q 021808 184 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 263 (307)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (307)
+..+++..+ .+.......+....+.+|.+|.+.|+++.|+......++..+++.......+..++...+.+.+.+.++.
T Consensus 98 ~~l~~~r~~-~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~ 176 (390)
T PRK03545 98 TVLLISRIG-IAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALIT 176 (390)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHH
Confidence 111222111 1111112233444677999999999999998877777777666554444445556556666666665555
Q ss_pred HHHHHhhccCCC
Q 021808 264 VVFVILFVPETQ 275 (307)
Q Consensus 264 ~~~~~~~lpet~ 275 (307)
.+......||.+
T Consensus 177 ~~~~~~~~~~~~ 188 (390)
T PRK03545 177 LLLLIKLLPLLP 188 (390)
T ss_pred HHHHHHhCCCCC
Confidence 554455567643
No 38
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.28 E-value=1.9e-10 Score=101.82 Aligned_cols=161 Identities=17% Similarity=0.104 Sum_probs=99.0
Q ss_pred HhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchh
Q 021808 104 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 183 (307)
Q Consensus 104 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (307)
...|.+.++.|.++.+.....+ .......++.++.|+++||+|||+.+..+....++..+..... . + .
T Consensus 26 ~~~p~~~~~~g~s~~~~g~~~~-~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~---~-~-------~ 93 (385)
T TIGR00710 26 PAFPEIAADLSTPASIVQMTLT-LYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALS---N-N-------I 93 (385)
T ss_pred ccHHHHHHHhCCCHHHHHHHHH-HHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH---c-c-------H
Confidence 3456777788887666554434 4444568889999999999999999887766655555443321 1 0 0
Q ss_pred HHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHH
Q 021808 184 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 263 (307)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (307)
+...+...+ .+.......+....+..|.+|.+.|++..|+......++..+++.......+..++...+.+.+.+..+.
T Consensus 94 ~~~~~~~~l-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 172 (385)
T TIGR00710 94 ETLLVLRFV-QAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILL 172 (385)
T ss_pred HHHHHHHHH-HHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 111222111 1221222233445778999999999999998888777777666555444444445444555555555555
Q ss_pred HHHHHhhccCCCCC
Q 021808 264 VVFVILFVPETQGL 277 (307)
Q Consensus 264 ~~~~~~~lpet~~~ 277 (307)
.+...++.||++.+
T Consensus 173 ~~~~~~~~~~~~~~ 186 (385)
T TIGR00710 173 SALIFFILPETLPY 186 (385)
T ss_pred HHHHHHhCCCCCCC
Confidence 55555667877544
No 39
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.27 E-value=3.7e-10 Score=101.19 Aligned_cols=158 Identities=14% Similarity=0.071 Sum_probs=94.2
Q ss_pred hHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHH
Q 021808 106 SPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWI 185 (307)
Q Consensus 106 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (307)
.|.+.+..+.+........++.. ....++.++.|.++||+|||++++.+..+.+++.+..... .+ . +.
T Consensus 39 l~~i~~~~~~~~~~~~~~~s~~~-~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a----~~------~-~~ 106 (413)
T PRK15403 39 IINVVRDFNADVSLAPASVSLYL-AGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT----TS------M-TQ 106 (413)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHH-HHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc----CC------H-HH
Confidence 34556677776655544444444 4467888999999999999999887766555554433221 11 1 11
Q ss_pred HHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHHHH
Q 021808 186 AVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVV 265 (307)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (307)
.+++..+ .+.......+..+.+..|.+|.+.|++..++......++..+++..-..+.+..++...|.+.+++.++..+
T Consensus 107 l~~~r~l-~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~ 185 (413)
T PRK15403 107 FLIARFI-QGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFV 185 (413)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 1222111 111111123344567889999999988888777776666666554443344444555566666666555555
Q ss_pred HHHhhccCCCC
Q 021808 266 FVILFVPETQG 276 (307)
Q Consensus 266 ~~~~~lpet~~ 276 (307)
...+++||++.
T Consensus 186 ~~~~~lp~~~~ 196 (413)
T PRK15403 186 GLLLAMPETVK 196 (413)
T ss_pred HHHHhCCCCcc
Confidence 44566898754
No 40
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.26 E-value=1e-10 Score=100.76 Aligned_cols=180 Identities=21% Similarity=0.224 Sum_probs=96.1
Q ss_pred hhcchhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhccc--CchHH
Q 021808 74 VFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHF--GRKKL 151 (307)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~--GrR~~ 151 (307)
.+++|..|...+..+.+. .+ =+.+..+.|.++.+....+...+.+.....-..+++|++++|+++||+ |||..
T Consensus 248 VL~Nk~iW~la~a~vfvY----iv-R~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p 322 (448)
T COG2271 248 VLKNKLIWLLALANVFVY----VV-RYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGP 322 (448)
T ss_pred HHcChHHHHHHHHHHHHH----HH-HHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccch
Confidence 456666654433322221 12 234456777777655444444445555555556899999999999997 77766
Q ss_pred HHH-hHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHH
Q 021808 152 ALS-SLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNW 230 (307)
Q Consensus 152 l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~ 230 (307)
..+ .+++..++.+ ..+. .++.+ ...........+++.-|+.-+.-....|.-|.+.-+++.|+...++.
T Consensus 323 ~~~i~~~~i~~~~~-~~w~-----~~~~~----~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Y 392 (448)
T COG2271 323 MALIFMLLITASLV-LYWL-----APNGS----YLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAY 392 (448)
T ss_pred HHHHHHHHHHHHHH-HHHc-----CCCcc----HHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHH
Confidence 533 2222222222 2121 11110 11111111122222222222333566899999999999999888777
Q ss_pred H-HHHHHHHhhHHHHHHhCCchhHHHHHHHHHHHHHHHH
Q 021808 231 I-SNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVI 268 (307)
Q Consensus 231 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (307)
+ |+...........+..|+...|.++.+.++++.+...
T Consensus 393 l~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~ 431 (448)
T COG2271 393 LIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLL 431 (448)
T ss_pred HhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHH
Confidence 7 5555443333333445666667666666655555433
No 41
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.26 E-value=2.3e-10 Score=101.85 Aligned_cols=169 Identities=18% Similarity=0.164 Sum_probs=99.6
Q ss_pred hcCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCC
Q 021808 96 FTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSS 175 (307)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~ 175 (307)
..+......+.|.+.+..|.+..+.....+. ......++.++.|+++||+|||+.++.+....++........ .
T Consensus 16 ~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~-~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~---~-- 89 (392)
T PRK10473 16 PAGIDMYLVGLPRIAADLNASEAQLHIAFSV-YLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLA---E-- 89 (392)
T ss_pred HHHHHHHhhhHHHHHHHhCCCHHHHHHHHHH-HHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHh---C--
Confidence 3344444456788888888876554443333 344467788999999999999999887766555554443221 0
Q ss_pred CCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHH
Q 021808 176 ASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLI 255 (307)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (307)
+ . +..+.+..+ .+.......+..+.+.+|.+|.+.|++..|+......++..+++..........++...+.+
T Consensus 90 -~----~-~~~~~~~~l-~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~ 162 (392)
T PRK10473 90 -T----S-SLFLAGRFL-QGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYT 162 (392)
T ss_pred -c----H-HHHHHHHHH-HHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHH
Confidence 0 0 111111111 11111122334557889999999999998888777666665554443333333344344555
Q ss_pred HHHHHHHHHHHHHhhccCCCCC
Q 021808 256 LAGIAVLAVVFVILFVPETQGL 277 (307)
Q Consensus 256 ~~~~~~~~~~~~~~~lpet~~~ 277 (307)
.+.+..+..+...++.||++.+
T Consensus 163 ~~~~~~i~~~~~~~~~~~~~~~ 184 (392)
T PRK10473 163 MAAMGILVLLLSLFILKETRPA 184 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCCCc
Confidence 5555555555555667887543
No 42
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.25 E-value=4.5e-10 Score=99.97 Aligned_cols=165 Identities=18% Similarity=0.190 Sum_probs=96.9
Q ss_pred CchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCC
Q 021808 98 GINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSAS 177 (307)
Q Consensus 98 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (307)
.........|.+.++.|.+..+.....+. ......++.++.|.++||+|||++++.+....++..+..... . +
T Consensus 27 ~~~~~~~~~~~l~~~~~~s~~~~g~~~~~-~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~---~-~-- 99 (405)
T TIGR00891 27 DFFLVALVLAEVAGEFGLTTVDAASLISA-ALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFA---P-G-- 99 (405)
T ss_pred HHHHHHHHHHHHHHHhCCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh---c-c--
Confidence 34444555677777888876665544443 444578899999999999999999887766655554443321 0 0
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhC--CchhHHH
Q 021808 178 SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG--TGATFLI 255 (307)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 255 (307)
+ +..+... ++.+....+..+....+.+|.+|++.|+++.|+......++..+++..........+ +...+.+
T Consensus 100 ----~-~~l~~~~-~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~ 173 (405)
T TIGR00891 100 ----Y-ITMFIAR-LVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFI 173 (405)
T ss_pred ----H-HHHHHHH-HHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHH
Confidence 1 1112222 222222223334455778999999999999998887777777776655444444333 2223333
Q ss_pred HHHHHHHHHHHHHhhccCCCC
Q 021808 256 LAGIAVLAVVFVILFVPETQG 276 (307)
Q Consensus 256 ~~~~~~~~~~~~~~~lpet~~ 276 (307)
. .+..+..++.....||++.
T Consensus 174 ~-~~~~~~~~~~~~~~~~~~~ 193 (405)
T TIGR00891 174 S-ILPIIFALWLRKNIPEAED 193 (405)
T ss_pred H-HHHHHHHHHHHHhCCCChh
Confidence 2 2222223333455688653
No 43
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.24 E-value=6e-10 Score=99.63 Aligned_cols=159 Identities=17% Similarity=0.083 Sum_probs=93.6
Q ss_pred hhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhH
Q 021808 105 YSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGW 184 (307)
Q Consensus 105 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (307)
..|.+.+..+.+....... .........++.++.|.++||+|||+.+..+....+++.+..... . + . +
T Consensus 35 ~~~~~~~~~~~s~~~~~~~-~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~---~-~------~-~ 102 (406)
T PRK15402 35 GMLAVVEDFNAGAEWVPTS-MTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLA---Q-S------I-E 102 (406)
T ss_pred chHHHHHHhCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH---c-c------H-H
Confidence 3455667777765554433 334444567888999999999999999887766665555443321 1 0 0 1
Q ss_pred HHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHHH
Q 021808 185 IAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAV 264 (307)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (307)
..+....+ .+.......+..+.+..|.+|++.|....++......++..+++.......+..++...+.+.+.+..+..
T Consensus 103 ~l~~~~~l-~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~ 181 (406)
T PRK15402 103 QFTLLRFL-QGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSF 181 (406)
T ss_pred HHHHHHHH-HHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHH
Confidence 11111111 11111122344556778999999998877776666555555554443333444455556666666665555
Q ss_pred HHHHhhccCCCC
Q 021808 265 VFVILFVPETQG 276 (307)
Q Consensus 265 ~~~~~~lpet~~ 276 (307)
+...+..||+++
T Consensus 182 ~~~~~~~~~~~~ 193 (406)
T PRK15402 182 FGLWRAMPETAG 193 (406)
T ss_pred HHHHHhCCCCCc
Confidence 555566788754
No 44
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.24 E-value=8.7e-10 Score=100.63 Aligned_cols=159 Identities=11% Similarity=0.045 Sum_probs=90.3
Q ss_pred chhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCC
Q 021808 99 INTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASS 178 (307)
Q Consensus 99 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (307)
.+....+.|.+.+..|.+..+.... .........++.++.|+++||+|||+++..+.+..++..+..... . +
T Consensus 52 ~~~~~~~~~~l~~~~gls~~~~g~~-~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~---~-s--- 123 (476)
T PLN00028 52 TFAAAPLLPIIRDNLNLTKSDIGNA-GIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLV---S-S--- 123 (476)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHh---c-C---
Confidence 3444556677888888876554443 444444567888999999999999998877665555544433221 1 1
Q ss_pred CCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHH---------hCC
Q 021808 179 SGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAEL---------VGT 249 (307)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 249 (307)
. ...++...+ .+....+..+ ...+.+|.||++.|+++.|+....+.++..++....+..... .++
T Consensus 124 ---~-~~l~~~r~l-~G~~~~~~~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gW 197 (476)
T PLN00028 124 ---A-TGFIAVRFF-IGFSLATFVS-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAW 197 (476)
T ss_pred ---H-HHHHHHHHH-HHHHHHhhHH-HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhh
Confidence 0 111111111 1111111222 234678999999999999998776666665554433322211 234
Q ss_pred chhHHHHHHHHHHHHHHHHhhc
Q 021808 250 GATFLILAGIAVLAVVFVILFV 271 (307)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~l 271 (307)
...+.+.+++.++..+...++.
T Consensus 198 r~~f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 198 RIAFFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 4456666665555544444433
No 45
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.24 E-value=9.8e-10 Score=97.86 Aligned_cols=159 Identities=18% Similarity=0.180 Sum_probs=97.3
Q ss_pred hhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhH
Q 021808 105 YSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGW 184 (307)
Q Consensus 105 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (307)
..|.+.++.|.+..+.....+.. .....++.++.|.++||+|||+++..+....++..+..... .+ + +
T Consensus 42 ~l~~~~~~~g~s~~~~g~~~~~~-~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~----~~------~-~ 109 (394)
T PRK10213 42 LLTPMAQDLGISEGVAGQSVTVT-AFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFA----NS------F-S 109 (394)
T ss_pred hHHHHHHHcCCCHHHHHHHHHHH-HHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHH----Ch------H-H
Confidence 45667778888766555444443 44467889999999999999999988777766655443221 10 0 1
Q ss_pred HHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHHH
Q 021808 185 IAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAV 264 (307)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (307)
..++.. +..+.......+....+.+|.+|.+.|+.+.++......++..+++.....+.+..++...+.+.+.+.++..
T Consensus 110 ~l~~~r-~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~ 188 (394)
T PRK10213 110 LLLIGR-ACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCI 188 (394)
T ss_pred HHHHHH-HHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 112211 2222222223445556789999999999999888777777776666555555554555555555555444444
Q ss_pred HHHHhhccCCCC
Q 021808 265 VFVILFVPETQG 276 (307)
Q Consensus 265 ~~~~~~lpet~~ 276 (307)
+......||+++
T Consensus 189 l~~~~~~p~~~~ 200 (394)
T PRK10213 189 FWIIKSLPSLPG 200 (394)
T ss_pred HHHHHHCCCCCc
Confidence 444445687643
No 46
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.23 E-value=7.8e-10 Score=100.07 Aligned_cols=154 Identities=14% Similarity=0.048 Sum_probs=94.1
Q ss_pred CchhhHHhhHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHHHHHHhhccc-CchHHHHHhHHHHHHHHHHHHHHHhhcCC
Q 021808 98 GINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHF-GRKKLALSSLAGVIISLVLLSWAFISGSS 175 (307)
Q Consensus 98 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~-GrR~~l~~~~~~~~~~~~~~~~~~~~~~~ 175 (307)
+++.+..++|.++++ .|.+..+. ............++.+++|+++||+ |||+.++.+.+..++..+.+... . ..
T Consensus 24 s~Yg~~~~L~~yL~~~lgls~~~a-~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~--~-~~ 99 (493)
T PRK15462 24 SFYGMRALLILYLTNQLKYDDNHA-YELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGAS--E-IH 99 (493)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHh--h-cc
Confidence 456666778877664 56765544 3344444455677889999999999 99999888777666554433210 0 00
Q ss_pred CCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcc--cchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhH
Q 021808 176 ASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQ--YRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATF 253 (307)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~--~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (307)
......+..+..... ....+....+.+|+||++ .|.++.++.+..+++++.+++.....+.+..++...|
T Consensus 100 -------~~~~~l~l~li~iG~-G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F 171 (493)
T PRK15462 100 -------PSFLYLSLAIIVCGY-GLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGF 171 (493)
T ss_pred -------hhHHHHHHHHHHHhc-ccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHH
Confidence 011112222211111 122343456789999986 7988999998888888888777666655555655555
Q ss_pred HHHHHHHHHH
Q 021808 254 LILAGIAVLA 263 (307)
Q Consensus 254 ~~~~~~~~~~ 263 (307)
...+..++++
T Consensus 172 ~iaaigm~l~ 181 (493)
T PRK15462 172 GLAAVGMIAG 181 (493)
T ss_pred HHHHHHHHHH
Confidence 5544434333
No 47
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.23 E-value=3e-10 Score=101.49 Aligned_cols=163 Identities=18% Similarity=0.114 Sum_probs=94.0
Q ss_pred hhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCC
Q 021808 100 NTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSS 179 (307)
Q Consensus 100 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (307)
.......|.+.+..+.+..+.... .........++.++.|+++||+|||+++..+.....++.+..... . +
T Consensus 32 ~~~~~~~~~~~~~~~~s~~~~g~~-~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~---~-~---- 102 (406)
T PRK11551 32 QSAGVAAPRMAQEFGLDVAQMGWA-FSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQA---W-D---- 102 (406)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHh---c-c----
Confidence 334455677778888876655444 334444568889999999999999999887765555544333221 1 0
Q ss_pred CchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHH
Q 021808 180 GVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGI 259 (307)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (307)
. +..++...+. +.......+....+.+|.+|++.|+++.|+......++..++...........++...+.+.+.+
T Consensus 103 --~-~~~~~~~~l~-G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (406)
T PRK11551 103 --F-PSLLVARLLT-GVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVG 178 (406)
T ss_pred --H-HHHHHHHHHH-HhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHH
Confidence 1 1122222221 22122223444577899999999999999877766666665543332222222333344444444
Q ss_pred HHHHHHHHHhhccCCC
Q 021808 260 AVLAVVFVILFVPETQ 275 (307)
Q Consensus 260 ~~~~~~~~~~~lpet~ 275 (307)
..+..+...+++||+.
T Consensus 179 ~~~~~~~~~~~l~~~~ 194 (406)
T PRK11551 179 PLLLVPLLMRWLPESR 194 (406)
T ss_pred HHHHHHHHHHhCCCCh
Confidence 4444444455678864
No 48
>PRK10054 putative transporter; Provisional
Probab=99.22 E-value=7.7e-10 Score=98.58 Aligned_cols=164 Identities=12% Similarity=0.136 Sum_probs=97.7
Q ss_pred CchhhHHhhHHHH-HHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCC
Q 021808 98 GINTVMYYSPTIV-QMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSA 176 (307)
Q Consensus 98 ~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~ 176 (307)
+.+....+.+.++ +..|.+..+.....+.. ....+++.++.|+++||+|||+++..+....++..+.+.+. . +
T Consensus 22 g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~-~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~--~--~- 95 (395)
T PRK10054 22 GRGATLPFMTIYLSRQYSLSVDLIGYAMTIA-LTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV--N--N- 95 (395)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH--h--H-
Confidence 3444445566555 45687766655544433 44567888999999999999998877766555544433221 1 0
Q ss_pred CCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHH
Q 021808 177 SSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLIL 256 (307)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (307)
+ +..+.+..+..... ....+....+.+|.+|++.|+++.|+......++..+++.....+. ..++...+...
T Consensus 96 -----~-~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~-~~g~~~~f~~~ 167 (395)
T PRK10054 96 -----V-TLVVLFFALINCAY-SVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLV-MQSINLPFWLA 167 (395)
T ss_pred -----H-HHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhccCcHHHHH
Confidence 0 11122222221111 1234445677899999999999999988888777776655444333 24555566665
Q ss_pred HHHHHHHHHHHHhhccCCC
Q 021808 257 AGIAVLAVVFVILFVPETQ 275 (307)
Q Consensus 257 ~~~~~~~~~~~~~~lpet~ 275 (307)
+.+.++..+.+.+++||++
T Consensus 168 ~~~~~i~~i~~~~~~~~~~ 186 (395)
T PRK10054 168 AICSAFPLVFIQIWVQRSE 186 (395)
T ss_pred HHHHHHHHHHHHHHHhccc
Confidence 5555555454555566654
No 49
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.22 E-value=1.2e-09 Score=99.99 Aligned_cols=160 Identities=11% Similarity=0.049 Sum_probs=87.1
Q ss_pred hHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHH
Q 021808 106 SPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWI 185 (307)
Q Consensus 106 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (307)
.|++.+..|.+..+..........+..+++.+++|+++||+|||+.+..+....++..+.+.. ...... .. +.
T Consensus 246 ~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~-l~~~~~----~~--~~ 318 (491)
T PRK11010 246 TTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWL-LSITDK----NL--YS 318 (491)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-HHhccc----cH--HH
Confidence 344445677766655444334444557889999999999999998776554443333322211 111111 10 11
Q ss_pred HHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHHHH
Q 021808 186 AVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVV 265 (307)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (307)
......+.......+. +..+++..++.|.+.+++..|+.++...++..+++.....+.+..|....|.+.+.+.+.+.+
T Consensus 319 l~~~~~l~~~~~g~~~-~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~ 397 (491)
T PRK11010 319 MGAAVFFENLCGGMGT-AAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLL 397 (491)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 1111111111111111 223567789999999999888888877777666555544455555544445555555555544
Q ss_pred HHHhhccCC
Q 021808 266 FVILFVPET 274 (307)
Q Consensus 266 ~~~~~lpet 274 (307)
.. ..++++
T Consensus 398 ~~-~~~~~~ 405 (491)
T PRK11010 398 LL-LVCRQT 405 (491)
T ss_pred HH-HHHHhc
Confidence 33 334544
No 50
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.22 E-value=1.4e-10 Score=105.97 Aligned_cols=167 Identities=19% Similarity=0.178 Sum_probs=104.5
Q ss_pred CchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCC
Q 021808 98 GINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSAS 177 (307)
Q Consensus 98 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (307)
.........|.+.+..|.+..+... ..........++.++.|+++||+|||+.++.+....++..+..... . +
T Consensus 17 ~~~~~~~~~p~~~~~~g~s~~~~~~-~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-----~-~ 89 (485)
T TIGR00711 17 DSTIVNVAIPTIAGDLGSSLSQVQW-VITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVA-----P-N 89 (485)
T ss_pred HHHHHHHHHHHHHHhcCCChhhhhH-HHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCc-----C-C
Confidence 3344556678888888886655444 4445555678899999999999999999887766655554433211 1 0
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHH
Q 021808 178 SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILA 257 (307)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (307)
. ...+++ ..+.+.......+....+.+|.+|++.|+++.|+......++..+++.....+.+..++.+.+.+.+
T Consensus 90 ----~-~~l~~~-~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~ 163 (485)
T TIGR00711 90 ----L-ELMIIF-RVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINV 163 (485)
T ss_pred ----H-HHHHHH-HHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhh
Confidence 1 112222 2222333333445566788999999999999998877777777666554444444445555565555
Q ss_pred HHHHHHHHHHHhhccCCCCC
Q 021808 258 GIAVLAVVFVILFVPETQGL 277 (307)
Q Consensus 258 ~~~~~~~~~~~~~lpet~~~ 277 (307)
.+.++..+...++.||++.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~ 183 (485)
T TIGR00711 164 PIGIIVVVVAFFILPRDKPA 183 (485)
T ss_pred HHHHHHHHHHHHHcCCcccc
Confidence 55555555555667776543
No 51
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.21 E-value=1.6e-09 Score=98.96 Aligned_cols=159 Identities=18% Similarity=0.114 Sum_probs=85.9
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhh-cCCCCCCCchhHHHHHHHHH
Q 021808 114 GFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIS-GSSASSSGVYGWIAVIGLAL 192 (307)
Q Consensus 114 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 192 (307)
+.+...... ..........++.++.|+++||+|||++++.+....+++.+........ ..... ........+...-+
T Consensus 51 ~~~~~~~~~-~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~R~ 128 (479)
T PRK10077 51 SAANSLLGF-CVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGP-DNTGYVPEFVIYRI 128 (479)
T ss_pred cCChhHHHH-HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccc-cchhHHHHHHHHHH
Confidence 333333333 3444444568899999999999999999988766665554443321100 00000 00011112222223
Q ss_pred HHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHH--------HHhCCchhHHHHHHHHHHHH
Q 021808 193 YIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVA--------ELVGTGATFLILAGIAVLAV 264 (307)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 264 (307)
+.+....+..+...++.+|.+|++.|+.+.|+.......|..++........ ...++.+.+.+.+...++..
T Consensus 129 l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~ 208 (479)
T PRK10077 129 IGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFL 208 (479)
T ss_pred HHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHH
Confidence 3333344445566688899999999999988876665555544322211111 11233344554444444433
Q ss_pred HHHHhhccCCC
Q 021808 265 VFVILFVPETQ 275 (307)
Q Consensus 265 ~~~~~~lpet~ 275 (307)
+..+++||+.
T Consensus 209 -~~~~~l~~s~ 218 (479)
T PRK10077 209 -MLLYFVPETP 218 (479)
T ss_pred -HHHHcCCCCc
Confidence 3456789875
No 52
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.19 E-value=1e-09 Score=98.65 Aligned_cols=144 Identities=21% Similarity=0.167 Sum_probs=87.0
Q ss_pred CchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCC
Q 021808 98 GINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSAS 177 (307)
Q Consensus 98 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (307)
......+..|.+.++.|.++.+.... .....+...++.++.|+++||+|||+++..+....+++.+.......
T Consensus 33 ~~~~~~~~~~~i~~~~~~s~~~~~~~-~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~------ 105 (426)
T PRK12307 33 DFMLIFYIMYLIKADLGLTDMEGAFL-ATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASG------ 105 (426)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhH------
Confidence 33444455667777888876654444 34444557889999999999999999998877776666554432210
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHH
Q 021808 178 SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFL 254 (307)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (307)
.+...++.. +.+....+..+....+.+|.+|++.|+++.|+......++.++++.......+..++...+.
T Consensus 106 -----~~~l~~~r~-l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~ 176 (426)
T PRK12307 106 -----VIMLTLSRF-IVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFF 176 (426)
T ss_pred -----HHHHHHHHH-HHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHH
Confidence 011222222 22222223344555778999999999999888777666666665544433333334333443
No 53
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.18 E-value=6.2e-10 Score=101.04 Aligned_cols=143 Identities=19% Similarity=0.178 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcc
Q 021808 123 LLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMG 202 (307)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (307)
+..........++.++.|+++||+|||++++.+..+.++..+..... .. ... + +..+++..+ .+.......
T Consensus 75 ~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~--~~-~~~----~-~~~~~~r~l-~G~~~~~~~ 145 (481)
T TIGR00879 75 LVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLA--AF-ALS----V-EMLIVGRVL-LGIGVGIAS 145 (481)
T ss_pred HHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHh--cc-ccc----h-HHHHHHHHH-HHhhhhHHH
Confidence 33444455578899999999999999999887766655554443221 11 100 0 112222222 222222334
Q ss_pred cccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhh---HHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCC
Q 021808 203 PVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTF---LTVAELVGTGATFLILAGIAVLAVVFVILFVPETQ 275 (307)
Q Consensus 203 ~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~ 275 (307)
+....+.+|.+|.+.|+.+.++......+|..++.... .......++...+.+.+... +..+...+++||+.
T Consensus 146 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~-~~~~~~~~~l~~~~ 220 (481)
T TIGR00879 146 ALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPA-GLLFLGLFFLPESP 220 (481)
T ss_pred hHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHH-HHHHHHHhcCCCCh
Confidence 45567889999999999999988777777776655433 11111122333444433323 33333456678874
No 54
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.16 E-value=5.9e-10 Score=99.89 Aligned_cols=138 Identities=14% Similarity=0.073 Sum_probs=78.0
Q ss_pred cCchhhHHhhHHHHHHcC--CCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHH-HHhHHHHHHHHHHHHHHHhhc
Q 021808 97 TGINTVMYYSPTIVQMAG--FQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLA-LSSLAGVIISLVLLSWAFISG 173 (307)
Q Consensus 97 ~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l-~~~~~~~~~~~~~~~~~~~~~ 173 (307)
...+....|.|.++++.+ .+... ............+++.++.++++||+|||+.. ........+.. .+ ....
T Consensus 256 ~~~~~~~~~~p~~l~~~~~~~s~~~-~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~-~~--~~~~- 330 (412)
T TIGR02332 256 NTLSAINIWTPQILQSFNQGSSNIM-IGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGW-LL--ASAT- 330 (412)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcHHH-hHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHH-HH--HHhc-
Confidence 344556678899988753 33333 33334455555788999999999999987753 32222222221 11 1111
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHh
Q 021808 174 SSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELV 247 (307)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 247 (307)
.. . .....+..+..... ....+..+....|.+|++.|+++.|+....+++++.+++.......+..
T Consensus 331 --~~--~---~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~ 396 (412)
T TIGR02332 331 --DH--N---LIQLLGIIMASMGS-FSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDAT 396 (412)
T ss_pred --CC--H---HHHHHHHHHHHHHh-hhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccC
Confidence 11 0 11111111111111 1112333455678999999999999999999988887776554444433
No 55
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.16 E-value=1.7e-09 Score=95.17 Aligned_cols=146 Identities=16% Similarity=0.084 Sum_probs=86.0
Q ss_pred hhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhH
Q 021808 105 YSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGW 184 (307)
Q Consensus 105 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (307)
+.+.+.++.+.+..... .......+..+++.++.++++||+|||+.+..+....++..+.+... . .. ...
T Consensus 227 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~-~~------~~~ 296 (377)
T TIGR00890 227 LYKPYGQSLGLSDGFLV-LAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFI--P-ML------NDV 296 (377)
T ss_pred HHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHc--c-cc------hhH
Confidence 34445566666544333 33444455578899999999999999998876665555554433211 1 00 011
Q ss_pred HHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHH
Q 021808 185 IAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAV 261 (307)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (307)
.......+. .....+..+....+.+|.+|++.|++..|+......++..+++.....+.+..+....+.+.+.+.+
T Consensus 297 ~~~~~~~~~-g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~ 372 (377)
T TIGR00890 297 LFLATVALV-FFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFAL 372 (377)
T ss_pred HHHHHHHHH-HHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHH
Confidence 111111121 2222223344456788999999999999999888888887777666555555554444444444333
No 56
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.15 E-value=5.6e-09 Score=93.23 Aligned_cols=161 Identities=24% Similarity=0.238 Sum_probs=93.0
Q ss_pred hhHHhhHHHHHHcCCCChHH----HHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCC
Q 021808 101 TVMYYSPTIVQMAGFQSNQL----ALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSA 176 (307)
Q Consensus 101 ~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~ 176 (307)
....+.|.+.++.|.+..+. .............++.++.|+++||+|||+.+..+....++..+..... .+
T Consensus 32 ~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~---~~-- 106 (408)
T PRK09874 32 LVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLA---QN-- 106 (408)
T ss_pred HhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHH---hh--
Confidence 34456777778877764432 1122333344467788999999999999999887666555554433221 00
Q ss_pred CCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHH
Q 021808 177 SSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLIL 256 (307)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (307)
. +..++...+. +.. .+..+....+..|.+|.+.|+...|+......++..+++.....+.+..++...+.+.
T Consensus 107 -----~-~~~~~~~~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~ 178 (408)
T PRK09874 107 -----I-WQFLILRALL-GLL-GGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFIT 178 (408)
T ss_pred -----H-HHHHHHHHHH-HHh-hhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 0 1112221111 111 1223344456789999999998888877766666666555444444444544455555
Q ss_pred HHHHHHHHHHHHhhccCC
Q 021808 257 AGIAVLAVVFVILFVPET 274 (307)
Q Consensus 257 ~~~~~~~~~~~~~~lpet 274 (307)
+.+.++..+...++.||.
T Consensus 179 ~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 179 ASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHHHHHHHHHHHHHhccC
Confidence 555555555555566664
No 57
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.14 E-value=1.2e-09 Score=100.27 Aligned_cols=175 Identities=18% Similarity=0.103 Sum_probs=105.0
Q ss_pred HHHHHhhcCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHH
Q 021808 90 LQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWA 169 (307)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~ 169 (307)
+..+........+..-.|.+.+..+.+..+..+..+ ........+.+..|+++||+|||++++.+....++..+.....
T Consensus 13 ~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~-~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a 91 (495)
T PRK14995 13 LVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIID-IYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFS 91 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHH-HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHc
Confidence 333333444445555678888888876655544444 4444456778899999999999999988777666655544321
Q ss_pred HhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccC-CcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhC
Q 021808 170 FISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVY-PEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 248 (307)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Elf-Pt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (307)
.+ .+..+++-.+. +....+..+.......+.+ |++.|+++.|+......++..+++.....+.+..+
T Consensus 92 ----~~-------~~~li~~r~l~-G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~g 159 (495)
T PRK14995 92 ----PT-------ASWLIATRALL-AIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFY 159 (495)
T ss_pred ----CC-------HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 11 11122222222 2212222333333445655 67889999999888887777777665555555556
Q ss_pred CchhHHHHHHHHHHHHHHHHhhccCCCCC
Q 021808 249 TGATFLILAGIAVLAVVFVILFVPETQGL 277 (307)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~lpet~~~ 277 (307)
+.+.|.+...+.++..+...+++||.+++
T Consensus 160 wr~~f~i~~~~~~~~~~l~~~~l~~~~~~ 188 (495)
T PRK14995 160 WGSVFLINVPIVLVVMGLTARYVPRQAGR 188 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 55666665555555555556677875443
No 58
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.14 E-value=3.5e-10 Score=99.53 Aligned_cols=161 Identities=15% Similarity=0.156 Sum_probs=99.6
Q ss_pred hHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCc
Q 021808 102 VMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGV 181 (307)
Q Consensus 102 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (307)
.....|.+.+..|.+..+.... .........++.++.|+++||+|||+++..+....+++.+...... +
T Consensus 14 ~~~~~~~~~~~~g~s~~~~g~~-~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~----~------ 82 (379)
T TIGR00881 14 FALAMPYLVEEIGLSKTDLGLL-LSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST----S------ 82 (379)
T ss_pred hhhhhHHHHHHhCCCHhHHHHH-HHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh----h------
Confidence 3445677777778876655444 4444455788999999999999999999887766666555443321 0
Q ss_pred hhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHH-hhHHHHHHhCCchhHHHHHHHH
Q 021808 182 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQ-TFLTVAELVGTGATFLILAGIA 260 (307)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 260 (307)
.+..++... +.+.......+....+.+|.+|.+.|++..|+......++..+++. .........++...+.+.+.+.
T Consensus 83 -~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (379)
T TIGR00881 83 -LWVMAALWA-LNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIA 160 (379)
T ss_pred -HHHHHHHHH-HHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence 122222222 2233333445666678899999999999888877777777766652 2222333334444555555555
Q ss_pred HHHHHHHHhhccCCC
Q 021808 261 VLAVVFVILFVPETQ 275 (307)
Q Consensus 261 ~~~~~~~~~~lpet~ 275 (307)
.+..+...++.||++
T Consensus 161 ~~~~~~~~~~~~~~~ 175 (379)
T TIGR00881 161 IIVSLICFLLLRDSP 175 (379)
T ss_pred HHHHHHHheeeCCCc
Confidence 555555555666654
No 59
>PRK10504 putative transporter; Provisional
Probab=99.14 E-value=2.6e-09 Score=97.36 Aligned_cols=165 Identities=13% Similarity=0.113 Sum_probs=97.5
Q ss_pred cCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCC
Q 021808 97 TGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSA 176 (307)
Q Consensus 97 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~ 176 (307)
........+.|.+.++.|.+..+..... ........++.++.|+++||+|||++++.+....+++.+.... . .+
T Consensus 24 ~~~~~~~~~~p~~~~~~g~s~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~--~-~~-- 97 (471)
T PRK10504 24 LDTTIVNTALPSMAQSLGESPLHMHMVI-VSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCAL--S-GT-- 97 (471)
T ss_pred HhHHHHHHHHHHHHHHhCcCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH--h-CC--
Confidence 3344555678888888888765544433 4444446788999999999999999988765555544433221 1 10
Q ss_pred CCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHH
Q 021808 177 SSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLIL 256 (307)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (307)
. +..+.... +.+.......+....+..|.+|++.|+++.|+......++..+++.....+.+..++.+.|.+.
T Consensus 98 -----~-~~l~~~~~-l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~ 170 (471)
T PRK10504 98 -----L-NELLLARV-LQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLIN 170 (471)
T ss_pred -----H-HHHHHHHH-HHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHH
Confidence 0 11122222 2222222234455567789999999998888877766667666555444444444444455555
Q ss_pred HHHHHHHHHHHHhhccCC
Q 021808 257 AGIAVLAVVFVILFVPET 274 (307)
Q Consensus 257 ~~~~~~~~~~~~~~lpet 274 (307)
.....+..+......|+.
T Consensus 171 ~~~~~l~~~~~~~~~~~~ 188 (471)
T PRK10504 171 IPVGIIGAIATLMLMPNY 188 (471)
T ss_pred HHHHHHHHHHHHHhCCCc
Confidence 444444444444555554
No 60
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.13 E-value=1.3e-09 Score=96.43 Aligned_cols=159 Identities=23% Similarity=0.177 Sum_probs=98.7
Q ss_pred HhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchh
Q 021808 104 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 183 (307)
Q Consensus 104 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (307)
...|.+.++.|.+..+.....+ .......++.++.|+++||+|||+.+..+....+++....... .+ .
T Consensus 12 p~~~~~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~---~~-------~- 79 (377)
T PRK11102 12 PALPVIAADFGVSAGSVQMTLS-AYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA---QT-------I- 79 (377)
T ss_pred ccHHHHHHHhCCCHHHHHHHHH-HHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH---cc-------H-
Confidence 3456777777876655444433 4444567889999999999999999887776666655544321 00 0
Q ss_pred HHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHH
Q 021808 184 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 263 (307)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (307)
+.......+ .+.......+....+.+|.+|.+.|++..|+......++..+++.......+..++...+.+.+.+..+.
T Consensus 80 ~~~~~~~~l-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 158 (377)
T PRK11102 80 DQLIYMRFL-HGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILA 158 (377)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHH
Confidence 111222221 1222222233445678999999999999999888777777776655444444445545555555555555
Q ss_pred HHHHHhhccCCC
Q 021808 264 VVFVILFVPETQ 275 (307)
Q Consensus 264 ~~~~~~~lpet~ 275 (307)
.+...++.||++
T Consensus 159 ~~~~~~~~~~~~ 170 (377)
T PRK11102 159 AALVFFFIPETL 170 (377)
T ss_pred HHHHHHhCCccC
Confidence 555556677764
No 61
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.13 E-value=3.8e-09 Score=94.05 Aligned_cols=159 Identities=16% Similarity=0.134 Sum_probs=87.9
Q ss_pred hHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHH
Q 021808 106 SPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWI 185 (307)
Q Consensus 106 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (307)
.|.+.++.+.+..+.....+ .......++.++.|+++||+|||+.+..+.....+..+..... . + . +.
T Consensus 31 ~~~i~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~---~-~------~-~~ 98 (394)
T PRK11652 31 IADMARDLNVREGAVQAVMA-AYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFA---H-S------L-TV 98 (394)
T ss_pred HHHHHHHhCCCHHHHHHHHH-HHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH---c-c------H-HH
Confidence 46677788887665554434 4444578889999999999999999887766555554433211 1 0 0 11
Q ss_pred HHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHHHH
Q 021808 186 AVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVV 265 (307)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (307)
.+.... +.+.......+....+..|.+|.+.|+...+.......++..+++.......+..++...+.+.+....+..+
T Consensus 99 l~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~ 177 (394)
T PRK11652 99 LIAASA-IQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTF 177 (394)
T ss_pred HHHHHH-HHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH
Confidence 111111 1111111122333456678889888877766655444444444443333333334444455555554444444
Q ss_pred HHHhhccCCCCC
Q 021808 266 FVILFVPETQGL 277 (307)
Q Consensus 266 ~~~~~lpet~~~ 277 (307)
...++.||++..
T Consensus 178 ~~~~~~~~~~~~ 189 (394)
T PRK11652 178 SMARWMPETRPA 189 (394)
T ss_pred HHHHhCCccCcc
Confidence 445667886543
No 62
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.13 E-value=2.9e-09 Score=97.59 Aligned_cols=104 Identities=17% Similarity=0.143 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceee
Q 021808 130 GTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLN 209 (307)
Q Consensus 130 ~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (307)
....+|.++.|+++||+|||+++..+..+.+++.+...+....... .......++..-++.+....+..+....+.
T Consensus 68 l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~----g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~ 143 (490)
T PRK10642 68 LIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATI----GIWAPILLLLCKMAQGFSVGGEYTGASIFV 143 (490)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHH----HHHHHHHHHHHHHHHHhHhHhhHHHHHHHH
Confidence 3456789999999999999999988877777766655432100000 000001122222333333344455666889
Q ss_pred cccCCcccchhhhhHHHHHHHHHHHHHH
Q 021808 210 SEVYPEQYRGICGGMSATVNWISNLIVA 237 (307)
Q Consensus 210 ~ElfPt~~R~~~~g~~~~~~~~~~~~~~ 237 (307)
+|.+|++.|+...++......+|..++.
T Consensus 144 ~e~~p~~~Rg~~~~~~~~~~~~G~~lg~ 171 (490)
T PRK10642 144 AEYSPDRKRGFMGSWLDFGSIAGFVLGA 171 (490)
T ss_pred HHhCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 9999999999988876655555555444
No 63
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.12 E-value=1.8e-09 Score=95.08 Aligned_cols=158 Identities=13% Similarity=0.068 Sum_probs=95.3
Q ss_pred HhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchh
Q 021808 104 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 183 (307)
Q Consensus 104 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (307)
...|.+.++.+.+..+.....+. ......++.+..|+++||+|||+++.......+...... .... + +
T Consensus 12 ~~lp~i~~~~~~s~~~~g~~~s~-~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~----~~~~--~----~- 79 (368)
T TIGR00903 12 PVLSLVAEDIDVSKEELGLLAIT-YPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRL----LDPF--N----Y- 79 (368)
T ss_pred hhHHHHHHHhCcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH----HHhc--c----H-
Confidence 45677778888876665554443 334467888899999999999987654332222221111 1100 0 0
Q ss_pred HHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHH
Q 021808 184 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 263 (307)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (307)
...+++-.+..... +.........+|.+|++.|+++.++......+|..++......+....++...+.+.+.+.++.
T Consensus 80 ~~l~~~R~l~G~g~--~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~ 157 (368)
T TIGR00903 80 EWLLACQLLAALGQ--PFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAG 157 (368)
T ss_pred HHHHHHHHHHHhHh--HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHH
Confidence 11222222211111 1122233445899999999999999888888888777665555555556666666666666666
Q ss_pred HHHHHhhccCCC
Q 021808 264 VVFVILFVPETQ 275 (307)
Q Consensus 264 ~~~~~~~lpet~ 275 (307)
.+...+++||+.
T Consensus 158 ~~~~~~~lp~~p 169 (368)
T TIGR00903 158 IILVLAALPALP 169 (368)
T ss_pred HHHHHHHcCCCC
Confidence 666677788864
No 64
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.12 E-value=5.9e-09 Score=94.02 Aligned_cols=136 Identities=16% Similarity=0.070 Sum_probs=73.5
Q ss_pred cCchhhHHhhHHHHHHcC---CCChHHHHHHH--HHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHh
Q 021808 97 TGINTVMYYSPTIVQMAG---FQSNQLALLLS--LAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFI 171 (307)
Q Consensus 97 ~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~ 171 (307)
.......+..|.+.++.+ .+..+...... ........++.+++|+++||+|||+.+..+....++..+...+..
T Consensus 36 ~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~- 114 (432)
T PRK10406 36 FDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLP- 114 (432)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcC-
Confidence 334444455566666654 22222111111 122223448889999999999999999887777666655543211
Q ss_pred hcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHH
Q 021808 172 SGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIV 236 (307)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~ 236 (307)
+.... .......+...-+..+....+..+....+.+|.+|++.|+...++.......|..++
T Consensus 115 --~~~~~-~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~ 176 (432)
T PRK10406 115 --GYETI-GTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLA 176 (432)
T ss_pred --CchhH-HHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHH
Confidence 00000 000111122222333333334456667889999999999988776554444444443
No 65
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.12 E-value=5.7e-09 Score=92.05 Aligned_cols=147 Identities=16% Similarity=0.197 Sum_probs=79.3
Q ss_pred hhHHHH-HHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchh
Q 021808 105 YSPTIV-QMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 183 (307)
Q Consensus 105 ~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (307)
+.|.++ +..|.+....... .....+..+++.++++++.||+|||+.+..+.....+....... .. + .
T Consensus 221 ~~~~~~~~~~g~~~~~~g~~-~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~--~~-~--------~ 288 (375)
T TIGR00899 221 NMPLLIIHELGLPDKLAGLM-MGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAA--DN-S--------L 288 (375)
T ss_pred hhHHHHHHHcCCCHHHHHHH-HHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHH--HH-H--------H
Confidence 445554 4556655443332 33333445667788999999999999887654443333222111 10 0 0
Q ss_pred HHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHH
Q 021808 184 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 263 (307)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (307)
+.......+..... ....+....+..|.+|++ |+++.|+......++..+++.......+..+....+.+.+.+.+++
T Consensus 289 ~~~~~~~~~~g~~~-g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~ 366 (375)
T TIGR00899 289 WALLMLQLLNAIFI-GILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVA 366 (375)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH
Confidence 11111111111111 112334446778999976 4578888887777887777666655555555444555555544444
Q ss_pred HH
Q 021808 264 VV 265 (307)
Q Consensus 264 ~~ 265 (307)
.+
T Consensus 367 ~~ 368 (375)
T TIGR00899 367 LF 368 (375)
T ss_pred HH
Confidence 43
No 66
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.12 E-value=2.9e-09 Score=96.19 Aligned_cols=162 Identities=15% Similarity=0.073 Sum_probs=90.9
Q ss_pred HhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchh
Q 021808 104 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 183 (307)
Q Consensus 104 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (307)
...|.+.+ .|.+..+.... .........++.++.|+++||+|||+++..+....+++.+..... ..... . .
T Consensus 48 ~~~p~~~~-~g~s~~~~g~~-~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~--~ 118 (438)
T TIGR00712 48 LAMPYLVE-QGFSKGELGFA-LSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFV--PWATS---S--I 118 (438)
T ss_pred hhhHHHHH-cCCCHhHhHHH-HHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhcc--ccccc---h--H
Confidence 34555544 57766554443 444445578899999999999999998877666555554443221 00000 0 1
Q ss_pred HHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHH-HHhCCchhHHHHHHHHHH
Q 021808 184 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVA-ELVGTGATFLILAGIAVL 262 (307)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 262 (307)
....+...+.....+ ...+.......|.+|++.|+++.|+......++..+++....... ...++...+.+.+.+.++
T Consensus 119 ~~l~~~~~l~g~~~g-~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i 197 (438)
T TIGR00712 119 AIMFVLLFLNGWFQG-MGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAII 197 (438)
T ss_pred HHHHHHHHHHHHHhh-cchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 111122222222222 222333456689999999999999977766666655544332222 223444556665665555
Q ss_pred HHHHHHhhccCCC
Q 021808 263 AVVFVILFVPETQ 275 (307)
Q Consensus 263 ~~~~~~~~lpet~ 275 (307)
..+...++.||++
T Consensus 198 ~~~~~~~~~~~~~ 210 (438)
T TIGR00712 198 VALFAFAMMRDTP 210 (438)
T ss_pred HHHHHHHhccCCH
Confidence 5555556677753
No 67
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.12 E-value=3.5e-09 Score=92.77 Aligned_cols=152 Identities=15% Similarity=0.101 Sum_probs=89.3
Q ss_pred HhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchh
Q 021808 104 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 183 (307)
Q Consensus 104 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (307)
...|.+..+.+.+..+... ..........++.++.|.++||+|||+++..+....+++.+.......... .+ .
T Consensus 20 ~~~~~~~~~~~~s~~~~g~-~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~ 92 (365)
T TIGR00900 20 VALPLYVLAGTGSASVLSL-AALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGG-LN-----I 92 (365)
T ss_pred HHHHHHHHHhhccHHHHHH-HHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCC-Cc-----H
Confidence 3445566666665554443 344444557788999999999999999988776655555444333221110 00 1
Q ss_pred HHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHH
Q 021808 184 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 263 (307)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (307)
+...++..+ .........+....+.+|.+|++.|++..|+......++..+++.....+....++...+.+.+...++.
T Consensus 93 ~~~~~~~~l-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~ 171 (365)
T TIGR00900 93 WQVYVLAGI-LAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAIS 171 (365)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 112222222 1222222344556788999999999999999888888887776655444444445444454444434333
No 68
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.12 E-value=1.5e-09 Score=98.97 Aligned_cols=127 Identities=18% Similarity=0.157 Sum_probs=80.3
Q ss_pred hhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhH
Q 021808 105 YSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGW 184 (307)
Q Consensus 105 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (307)
..|.+.++.+.+..+.....+ .......++.++.|+++||+|||+++..+.+..++..+.+......... + .+
T Consensus 51 ~~~~i~~~~~~s~~~~g~~~s-~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~-~-----~~ 123 (467)
T PRK09556 51 AQNDMISTYGLSTTELGMIGL-GFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSV-S-----LG 123 (467)
T ss_pred hhHHHHHhcCCCHHHHHHHHH-HHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccc-h-----HH
Confidence 356777888887666554444 4445577889999999999999999887766666655554432211111 0 11
Q ss_pred HHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHh
Q 021808 185 IAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQT 239 (307)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~ 239 (307)
..++... ..+.......+....+.+|.||.+.|+++.|+......+|..+++..
T Consensus 124 ~l~~~r~-l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i 177 (467)
T PRK09556 124 LMIALWA-LSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGV 177 (467)
T ss_pred HHHHHHH-HHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHH
Confidence 1222222 22222223345555788999999999999888777666666665443
No 69
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.12 E-value=3.6e-09 Score=93.88 Aligned_cols=160 Identities=16% Similarity=0.129 Sum_probs=92.8
Q ss_pred HHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCch
Q 021808 103 MYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVY 182 (307)
Q Consensus 103 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (307)
....|.+.++.|.+..+.....+ .......++.++.|+++||+|||+++..+....++..+..... .+ .
T Consensus 23 ~~~l~~~~~~~g~s~~~~g~~~s-~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~----~~------~ 91 (382)
T PRK10091 23 MGVLTELAHDVGISIPAAGHMIS-YYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLS----SS------Y 91 (382)
T ss_pred HhChHHHHHHcCCCHHHHhHHHH-HHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHh----Cc------H
Confidence 34567777788887665544444 3444578899999999999999999988776666655443321 11 0
Q ss_pred hHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHH
Q 021808 183 GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVL 262 (307)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (307)
+...+...+ .+.......+....+..|.+|.+.|+...|+......++..++........+..++...+.+.+.+..+
T Consensus 92 -~~l~~~r~l-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~ 169 (382)
T PRK10091 92 -LMLAIGRLV-SGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIA 169 (382)
T ss_pred -HHHHHHHHH-HHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHH
Confidence 111222111 111111112333456789999999988887766655555555443332333334444455555555554
Q ss_pred HHHHHHhhccCCC
Q 021808 263 AVVFVILFVPETQ 275 (307)
Q Consensus 263 ~~~~~~~~lpet~ 275 (307)
..+...+++||.+
T Consensus 170 ~~~~~~~~lp~~~ 182 (382)
T PRK10091 170 VLASIYFWVPDIR 182 (382)
T ss_pred HHHHHHHhCCCCC
Confidence 4444456678864
No 70
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.10 E-value=3.7e-09 Score=97.03 Aligned_cols=163 Identities=20% Similarity=0.234 Sum_probs=94.2
Q ss_pred chhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCC
Q 021808 99 INTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASS 178 (307)
Q Consensus 99 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (307)
........|.+.+..|.+..+.....+. ......++.++.|.++||+|||+++..+....++..+...... +
T Consensus 36 ~~~~~~~~~~i~~~~~~s~~~~~~~~~~-~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~---~---- 107 (496)
T PRK03893 36 FVLITLVLTEVQGEFGLTTVQAASLISA-AFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAP---G---- 107 (496)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHh---H----
Confidence 3444455677777888876554444443 3445678899999999999999998877666555554433210 0
Q ss_pred CCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHH
Q 021808 179 SGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAG 258 (307)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (307)
+ +...+. ..+.+....+..+....+..|.+|.+.|+.+.|+......++..+++..........++...+.+ ..
T Consensus 108 ---~-~~l~~~-~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~-~~ 181 (496)
T PRK03893 108 ---Y-WTLFIA-RLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFI-GI 181 (496)
T ss_pred ---H-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHH-HH
Confidence 0 111122 12222222233344456789999999999998888877777777666555444443343333333 22
Q ss_pred HHHHHHHHHHhhccCCC
Q 021808 259 IAVLAVVFVILFVPETQ 275 (307)
Q Consensus 259 ~~~~~~~~~~~~lpet~ 275 (307)
+..+..+......||++
T Consensus 182 ~~~~~~~~~~~~~p~~~ 198 (496)
T PRK03893 182 LPIIFALWLRKNLPEAE 198 (496)
T ss_pred HHHHHHHHHHHhCCCch
Confidence 22222222334456653
No 71
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.10 E-value=5.6e-09 Score=93.02 Aligned_cols=167 Identities=13% Similarity=0.089 Sum_probs=99.7
Q ss_pred CchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCC
Q 021808 98 GINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSAS 177 (307)
Q Consensus 98 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (307)
++.....|.|.++++.|.+..+.... .....+..+++.++.+++.||+|||+.+..+....++....+.+. . . .
T Consensus 220 ~~~~~~~~lp~~l~~~g~s~~~ag~~-~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~--~--~-~ 293 (393)
T PRK09705 220 GYASLIAWLPAFYIEIGASAQYSGSL-LALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWL--P--L-Q 293 (393)
T ss_pred HHHHHHHHHHHHHHHcCCChhhhhHH-HHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHc--c--c-h
Confidence 34455567788878777765544433 444455678899999999999999998876655444443322211 1 0 0
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCcccccceeecccC-CcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCC-chhHHH
Q 021808 178 SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVY-PEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGT-GATFLI 255 (307)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Elf-Pt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 255 (307)
. ... .. .+.... ..+..+.......+.+ |++.|++..|+....+.++..+++.....+.+..+. ...+.+
T Consensus 294 --~--~~~-~~--~l~g~g-~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~ 365 (393)
T PRK09705 294 --L--PVL-WA--MVCGLG-LGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAF 365 (393)
T ss_pred --H--HHH-HH--HHHHHh-ccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHH
Confidence 0 011 11 111111 1122233333445666 467899999998888888877777666666666553 334455
Q ss_pred HHHHHHHHHHHHHhhccCCCCCC
Q 021808 256 LAGIAVLAVVFVILFVPETQGLT 278 (307)
Q Consensus 256 ~~~~~~~~~~~~~~~lpet~~~~ 278 (307)
..+++++..+....+.|||+.|.
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 366 HALCVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred HHHHHHHHHHHHHHhccccccch
Confidence 55555555566667889998774
No 72
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.09 E-value=1.3e-09 Score=95.06 Aligned_cols=159 Identities=23% Similarity=0.321 Sum_probs=94.9
Q ss_pred HhhH-HHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCch
Q 021808 104 YYSP-TIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVY 182 (307)
Q Consensus 104 ~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (307)
...| .+.++.|.+..+.....+ .......++.++.|+++||+|||+++..+....+++.+...+. .+
T Consensus 17 ~~~~~~~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~---~~-------- 84 (352)
T PF07690_consen 17 PALPLYLAEELGLSPSQIGLLFS-AFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA---SN-------- 84 (352)
T ss_dssp HHHH-HHHCCSTTTSHCHHHHHH-HHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH---CC--------
T ss_pred HHHHHHHHHccCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh---hh--------
Confidence 4445 555666777666554444 4445578899999999999999998888777766663333221 11
Q ss_pred hHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHH
Q 021808 183 GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVL 262 (307)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (307)
.+..+++.. +.+.......+....+.+|.+|.+.|++..|+......++..+++.....+.+..++...+.+.+.+.++
T Consensus 85 ~~~~~~~~~-l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~ 163 (352)
T PF07690_consen 85 FWLLLIARF-LLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLI 163 (352)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHH
T ss_pred HHHHhhhcc-ccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhh
Confidence 121222222 2222222334555678899999999999999988888888776654443333233344566666666666
Q ss_pred HHHHHHhhccCCC
Q 021808 263 AVVFVILFVPETQ 275 (307)
Q Consensus 263 ~~~~~~~~lpet~ 275 (307)
..++..++.++++
T Consensus 164 ~~il~~~~~~~~~ 176 (352)
T PF07690_consen 164 AAILFILFLPEPP 176 (352)
T ss_dssp HHHHHHCCC---S
T ss_pred hhhhHhhhhhhcc
Confidence 6554334554443
No 73
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.08 E-value=1.2e-08 Score=88.75 Aligned_cols=156 Identities=21% Similarity=0.231 Sum_probs=113.5
Q ss_pred HhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchh
Q 021808 104 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 183 (307)
Q Consensus 104 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (307)
--+|.+-++.+.+.....+.++.+..+ ..++.++...+.||+.||++++....+..++.+....... +
T Consensus 34 gLLp~iA~dl~vs~~~aG~lis~yAl~-~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~----------f- 101 (394)
T COG2814 34 GLLPPIAADLGVSEGAAGQLITAYALG-VALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPS----------F- 101 (394)
T ss_pred hchHHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhcc----------H-
Confidence 346778888999887766666666555 6889999999999999999998777666666655443210 1
Q ss_pred HHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHH
Q 021808 184 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 263 (307)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (307)
++.+++ -+..+..+....++...+.+++.|++.|+++.++...-..+..+++.+.-..+.+..|+...|...+.+.++.
T Consensus 102 ~~Ll~a-R~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~ 180 (394)
T COG2814 102 AVLLLA-RALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLA 180 (394)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 112222 2233333344456667888999999999999998877777777777766666777788888898888888888
Q ss_pred HHHHHhhcc
Q 021808 264 VVFVILFVP 272 (307)
Q Consensus 264 ~~~~~~~lp 272 (307)
.+..+..+|
T Consensus 181 ~~~~~~~lP 189 (394)
T COG2814 181 LLLLWKLLP 189 (394)
T ss_pred HHHHHHhCC
Confidence 887888888
No 74
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.06 E-value=1.4e-08 Score=92.79 Aligned_cols=147 Identities=19% Similarity=0.115 Sum_probs=86.4
Q ss_pred CchhhHHhhHHHHH-HcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCchHHHHHhHHHHHHHHHHHHHHHhhcCC
Q 021808 98 GINTVMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH-FGRKKLALSSLAGVIISLVLLSWAFISGSS 175 (307)
Q Consensus 98 ~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr-~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~ 175 (307)
+++.+..+++.+++ ..|.+..+. .+.............+++|+++|| +|||++++.+....++..++.+... +.
T Consensus 29 ~~y~~~~~l~~yl~~~lg~~~~~a-~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~---~~ 104 (489)
T PRK10207 29 GYYGVQGILAVFFVKQLGFSQEQA-FITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSL---LK 104 (489)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhc---cc
Confidence 45555555655554 466655443 333333333445667799999999 9999999988877777665554321 10
Q ss_pred CCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCccc--chhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhH
Q 021808 176 ASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQY--RGICGGMSATVNWISNLIVAQTFLTVAELVGTGATF 253 (307)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~--R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (307)
.....++..+. +.......+....+.+|+||++. |..+.++.....++|+.+++...+.+.+..++.+.|
T Consensus 105 -------~~ll~~~~~l~-~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F 176 (489)
T PRK10207 105 -------PDLIFIALGTI-AVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTY 176 (489)
T ss_pred -------hhHHHHHHHHH-HhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHH
Confidence 01111222222 22233344555678899999885 455666666666677766665555566556655555
Q ss_pred HHH
Q 021808 254 LIL 256 (307)
Q Consensus 254 ~~~ 256 (307)
.+.
T Consensus 177 ~i~ 179 (489)
T PRK10207 177 NLC 179 (489)
T ss_pred HHH
Confidence 443
No 75
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.06 E-value=2.5e-09 Score=80.10 Aligned_cols=132 Identities=24% Similarity=0.305 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeec
Q 021808 131 TNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNS 210 (307)
Q Consensus 131 ~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (307)
..+++.++.+++.||+|||+.+..+.....+..+..... .+ . +.......+ .........+..+.+..
T Consensus 10 ~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~---~~-------~-~~~~~~~~~-~g~~~~~~~~~~~~~~~ 77 (141)
T TIGR00880 10 GQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS---SN-------I-TVLIIARFL-QGFGAAFALVAGAALIA 77 (141)
T ss_pred HHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh---cc-------H-HHHHHHHHH-HHHHHHHHHHhHHHHHH
Confidence 356788899999999999999877665555554433221 00 0 111121111 11222223345567789
Q ss_pred ccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCC
Q 021808 211 EVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPET 274 (307)
Q Consensus 211 ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet 274 (307)
|.+|++.|++..|+......++..+++.......+..+....+.+.+.+..+..+...++.|||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 78 DIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 9999999999999998888888877766555444444443455555555555555555566664
No 76
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.06 E-value=5.7e-09 Score=90.20 Aligned_cols=167 Identities=18% Similarity=0.180 Sum_probs=104.2
Q ss_pred hHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHH
Q 021808 106 SPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWI 185 (307)
Q Consensus 106 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (307)
.|.+.+..+.+..+.... .....+..-++-.+.|.++||.+.|..+..+++.++++.+.+++... .++
T Consensus 52 ~p~l~e~~~lsk~~lG~i-~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s-----------~~~ 119 (448)
T COG2271 52 MPALIEDGGLSKTQLGIL-GSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPS-----------LFL 119 (448)
T ss_pred cHHHHHhcCCCHHHHHHH-HHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhH-----------HHH
Confidence 466777777766555544 44445557889999999999999999999999999998888765321 122
Q ss_pred HHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhh--HHHHHHhCCchhHHHHHHHHHHH
Q 021808 186 AVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTF--LTVAELVGTGATFLILAGIAVLA 263 (307)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 263 (307)
+.+... ..+.+...-.|...-.++.-||++.||+..|+=+...++|+.+.+... .......++...|++-++++++.
T Consensus 120 ~~~l~~-lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiiv 198 (448)
T COG2271 120 FAVLWV-LNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIV 198 (448)
T ss_pred HHHHHH-HHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHH
Confidence 222222 333333333344456778999999999988877766666665544433 22222234445566656666655
Q ss_pred HHHHHhhc---cCCCCCCHHHHHHHHh
Q 021808 264 VVFVILFV---PETQGLTFLEVEQMWK 287 (307)
Q Consensus 264 ~~~~~~~l---pet~~~~l~e~~~~~~ 287 (307)
.+++++.+ ||+.|. +.+|+.++
T Consensus 199 al~~~~~~rd~Pqs~GL--P~ie~~~~ 223 (448)
T COG2271 199 ALILLFLLRDRPQSEGL--PPIEEYRG 223 (448)
T ss_pred HHHHHHHhCCCccccCC--CCHHHhhc
Confidence 55555555 555665 33444443
No 77
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.06 E-value=5e-09 Score=94.13 Aligned_cols=133 Identities=13% Similarity=0.106 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCccccccee
Q 021808 129 AGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTL 208 (307)
Q Consensus 129 ~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (307)
.....++.+++++++||+|||+.+..+....++......+. .+ . +.......+..... ....+....+
T Consensus 272 ~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~----~~--~-----~~~~~~~~l~g~~~-~~~~~~~~~~ 339 (420)
T PRK09528 272 VFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA----TG--P-----LEVSILKLLHAFEV-PFLLVGVFKY 339 (420)
T ss_pred HHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc----cc--H-----HHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 34467888999999999999998776655444443333211 11 0 11111111111111 1111223357
Q ss_pred ecccCCcccchhhhhHH-HHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccC
Q 021808 209 NSEVYPEQYRGICGGMS-ATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPE 273 (307)
Q Consensus 209 ~~ElfPt~~R~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpe 273 (307)
.+|.+|++.|++..+.. .....++..+++.....+.+..+....+...+.+.++..++..+.+++
T Consensus 340 ~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 340 ITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 78999999998776553 344556666666555555555565556666666665555544445544
No 78
>PRK03545 putative arabinose transporter; Provisional
Probab=99.04 E-value=3.1e-08 Score=88.12 Aligned_cols=163 Identities=20% Similarity=0.155 Sum_probs=85.4
Q ss_pred HhhHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCch
Q 021808 104 YYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVY 182 (307)
Q Consensus 104 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (307)
.|.+.++.+ .|.+...... ......+..+++.++.++++||.|||.+.... ....+....... .. ..
T Consensus 226 ~~~~~~l~~~~g~s~~~~~~-~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~-~~~~~~~~~l~~--~~-~~------- 293 (390)
T PRK03545 226 SYIEPFVQQVAGLSENFATL-LLLLFGGAGIIGSVLFSRLGNRHPSGFLLIAI-ALLLVCLLLLLP--AA-NS------- 293 (390)
T ss_pred HHHHHHHHHhcCCCccHHHH-HHHHHHHHHHHHHHHHHHHhhccchhHHHHHH-HHHHHHHHHHHH--Hh-ch-------
Confidence 344444444 5665544333 34444455788999999999999988754432 222222211111 11 10
Q ss_pred hHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHH
Q 021808 183 GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVL 262 (307)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (307)
.+....+..+... .....++....+..|..| +.|+++.|+......++..+++.....+.+..+....+...+.+.++
T Consensus 294 ~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~ 371 (390)
T PRK03545 294 EWHLSVLSIFWGI-AIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALA 371 (390)
T ss_pred HHHHHHHHHHHHH-HHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHH
Confidence 0111122112111 122222333355668877 57888888887777777777766666666655555555565555555
Q ss_pred HHHHHHhhccCCCCCCHHH
Q 021808 263 AVVFVILFVPETQGLTFLE 281 (307)
Q Consensus 263 ~~~~~~~~lpet~~~~l~e 281 (307)
+.+......+ .+..++||
T Consensus 372 ~~~~~~~~~~-~~~~~~~~ 389 (390)
T PRK03545 372 ALVWSILIFR-RFPVTLEE 389 (390)
T ss_pred HHHHHHHHcc-ccchhhcc
Confidence 5554444332 23334443
No 79
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.04 E-value=6.8e-09 Score=93.16 Aligned_cols=166 Identities=15% Similarity=0.103 Sum_probs=91.1
Q ss_pred hhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCC
Q 021808 101 TVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 180 (307)
Q Consensus 101 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (307)
......|.+.++.+.+..... ..........+++.++.|.++||+|||+++..+....++..+.+......... .
T Consensus 35 ~~~~~~~~~~~~~~~s~~~~g-~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~ 109 (417)
T PRK10489 35 LLGVAVPVQIQMMTGSTLQVG-LSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEP----S 109 (417)
T ss_pred HHHHHHHHHHHHHHCCHHHHH-HHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCC----c
Confidence 444566777777766544433 34444455567889999999999999998876655555444333221111111 0
Q ss_pred chhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHH
Q 021808 181 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIA 260 (307)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (307)
+ +...+...+ .........+....+.+|.+|.+.|+++.++......++..+++.....+....++.+.+.+.+...
T Consensus 110 -~-~~l~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~ 186 (417)
T PRK10489 110 -L-LAIYLLGLW-DGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGT 186 (417)
T ss_pred -H-HHHHHHHHH-HHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 1 111111111 1111111122334677899999999988888777776776666554444444444444554444444
Q ss_pred HHHHHHHHhhccCCC
Q 021808 261 VLAVVFVILFVPETQ 275 (307)
Q Consensus 261 ~~~~~~~~~~lpet~ 275 (307)
++.. +..+.+||++
T Consensus 187 ~~~~-~~~~~l~~~~ 200 (417)
T PRK10489 187 FITL-LPLLRLPALP 200 (417)
T ss_pred HHHH-HHHHhCCCCC
Confidence 3333 3345567653
No 80
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.04 E-value=1.9e-08 Score=88.39 Aligned_cols=129 Identities=19% Similarity=0.153 Sum_probs=79.2
Q ss_pred hhhHHhhHH-HHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCC
Q 021808 100 NTVMYYSPT-IVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASS 178 (307)
Q Consensus 100 ~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (307)
.....+.|. +.++.|.+..+.... .....+...++.++.|+++||+|||+.++.+....++..+...... .+
T Consensus 18 ~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~--~~---- 90 (366)
T TIGR00886 18 FAFSPLAVQMIKDDLGLSTAQLGNL-VAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAV--QS---- 90 (366)
T ss_pred HHhHHhhhHHHHHHhCCCHHHhhHh-hHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHh--hh----
Confidence 344456674 667778876655443 4444555788999999999999999998887776666655443221 00
Q ss_pred CCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhH
Q 021808 179 SGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFL 241 (307)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~ 241 (307)
+ +..+++..+ .+... +.......+.+|.+|++.|++..++....+..+..++....+
T Consensus 91 ---~-~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~ 147 (366)
T TIGR00886 91 ---Y-SVLLLLRLF-IGIAG-GSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMP 147 (366)
T ss_pred ---H-HHHHHHHHH-HHHhc-hhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHH
Confidence 1 112222222 12222 222334467789999999999988877666666655544433
No 81
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.03 E-value=1.1e-08 Score=92.96 Aligned_cols=159 Identities=15% Similarity=0.156 Sum_probs=92.0
Q ss_pred hhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCC
Q 021808 101 TVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 180 (307)
Q Consensus 101 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (307)
....+.+.+.+..|.+..+.....+... ....++.++.|+++||+|||+.++.+....++..+...+. .+.
T Consensus 37 ~~~~~~~~i~~~~g~s~~~~~~~~s~~~-~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~---~~~----- 107 (455)
T TIGR00892 37 AVTVFFKELQQIFQATYSETAWISSIML-AVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFS---SNV----- 107 (455)
T ss_pred chhhhHHHHHHHhCcchhHHHHHHHHHH-HHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHh---hhH-----
Confidence 3455677888888887666555444433 3356778899999999999999887765555544433221 100
Q ss_pred chhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHH
Q 021808 181 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIA 260 (307)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (307)
+.......++.+.......+....+..+.|| +.|+++.|+......++..+++.....+.+..++...|.+.+.+.
T Consensus 108 ---~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~ 183 (455)
T TIGR00892 108 ---IELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLL 183 (455)
T ss_pred ---HHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 1111111111111111111233356678887 679999998887777776666555444555556656676666655
Q ss_pred HHHHHHHHhhcc
Q 021808 261 VLAVVFVILFVP 272 (307)
Q Consensus 261 ~~~~~~~~~~lp 272 (307)
++..+...+..|
T Consensus 184 ~~~~v~~~~~~~ 195 (455)
T TIGR00892 184 LHCCVCGALMRP 195 (455)
T ss_pred HHHHHHHHHhCC
Confidence 544443333333
No 82
>PRK03699 putative transporter; Provisional
Probab=99.03 E-value=3e-08 Score=88.36 Aligned_cols=150 Identities=10% Similarity=0.054 Sum_probs=84.9
Q ss_pred hhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCC
Q 021808 101 TVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 180 (307)
Q Consensus 101 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (307)
......|.+.+..+.+..+.....+. ......++.++.|+++||+|||+++..+....++..+..... .+
T Consensus 25 ~~g~~~~~i~~~~~~s~~~~g~~~s~-~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~----~~----- 94 (394)
T PRK03699 25 VTGMVMGPIAEYFNLPVSSMSNTFTF-LNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFS----HS----- 94 (394)
T ss_pred HHhhhhHHHHHHhCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc----ch-----
Confidence 44455677888888876665554444 344578899999999999999999887766555554433221 00
Q ss_pred chhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHH-HhCCchhHHHHHHH
Q 021808 181 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAE-LVGTGATFLILAGI 259 (307)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 259 (307)
. +..++...+...... ...+....+.+|.+|++.|+...+........++.+++.....+.. ..++...+.+.+.+
T Consensus 95 -~-~~~~~~~~l~G~~~g-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~ 171 (394)
T PRK03699 95 -L-ALFSIAMFVLGVVSG-ITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLV 171 (394)
T ss_pred -H-HHHHHHHHHHHHhhH-hhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 0 112222222222222 2233445677899999999888777655555555444433322222 22344455444444
Q ss_pred HHHH
Q 021808 260 AVLA 263 (307)
Q Consensus 260 ~~~~ 263 (307)
.++.
T Consensus 172 ~~~~ 175 (394)
T PRK03699 172 YVAI 175 (394)
T ss_pred HHHH
Confidence 4433
No 83
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.02 E-value=1.6e-09 Score=95.30 Aligned_cols=139 Identities=17% Similarity=0.258 Sum_probs=73.2
Q ss_pred hhHHhhHHHHH-HcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCc-hHHHHHhHHHHHHHHHHHHHHHhhcCCCCC
Q 021808 101 TVMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGR-KKLALSSLAGVIISLVLLSWAFISGSSASS 178 (307)
Q Consensus 101 ~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~Gr-R~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (307)
....+.|.++. ..|.+..+.. .......+..+++.++.++++||.++ |+..... .........+...... ...
T Consensus 234 ~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~-- 308 (379)
T TIGR00881 234 GILDWSPLYLTQEKGFSKEKAS-WAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAV-FFMALIIVSLLVYWLN-PAA-- 308 (379)
T ss_pred HHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHH-HHHHHHHHHHHHHhcC-cch--
Confidence 33455666654 4566554433 33444455578899999999998643 3322211 1111111111111110 000
Q ss_pred CCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhC
Q 021808 179 SGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 248 (307)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (307)
. ........ ...+....+..+..+.+..|.+|++.|+++.|+....+.++..+++.....+.+..+
T Consensus 309 -~--~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 374 (379)
T TIGR00881 309 -N--PLMDLICL-FALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFG 374 (379)
T ss_pred -h--HHHHHHHH-HHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhc
Confidence 0 01111111 112222223334445677999999999999999988888888777666555555444
No 84
>PRK15075 citrate-proton symporter; Provisional
Probab=99.02 E-value=2.1e-08 Score=90.50 Aligned_cols=142 Identities=18% Similarity=0.176 Sum_probs=79.4
Q ss_pred HHHHHhhcCchhhHHhhHHHHHHcCCCChHHHHHH-HHHHHH----HHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHH
Q 021808 90 LQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLL-SLAVAG----TNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLV 164 (307)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~----~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~ 164 (307)
+..+..+.....+....|.+.++.+.++.+..... +..... ...++.++.|.++||+|||++++.+....++..+
T Consensus 22 ~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~ 101 (434)
T PRK15075 22 SGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTL 101 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHH
Confidence 33444445556667788888888877665433222 211111 1236788899999999999999887766655555
Q ss_pred HHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHH
Q 021808 165 LLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLI 235 (307)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~ 235 (307)
...+.. +............+++- +..+....+..+....+.+|.+|++.|++..++.......+..+
T Consensus 102 l~~~~~---~~~~~~~~~~~~l~~~R-~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~ 168 (434)
T PRK15075 102 LIAFVP---GYATIGLAAPLLVLLGR-LLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVF 168 (434)
T ss_pred HHHhCC---cHHHHHHHHHHHHHHHH-HHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHH
Confidence 443210 00000000000112222 22222222223334578899999999999998877665555443
No 85
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.02 E-value=1.1e-08 Score=91.64 Aligned_cols=187 Identities=13% Similarity=0.112 Sum_probs=97.0
Q ss_pred chhhhhcchhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCch
Q 021808 70 RYLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRK 149 (307)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR 149 (307)
...+.+|+++.|...++. +..+.++....+|.|++.++. .+.. ..........+++.+..+++|+++||+|+|
T Consensus 244 ~~~~vlk~~~~Wllslly-----~~tFG~fvg~s~~lp~~~~~~-~~~~-~~l~~~~l~~l~~~l~rplgG~LADRiG~~ 316 (462)
T PRK15034 244 DQLPVLQRLHLWLLSLLY-----LATFGSFIGFSAGFAMLAKTQ-FPDV-NILRLAFFGPFIGAIARSVGGAISDKFGGV 316 (462)
T ss_pred HHHHHhCCCchhHHHHHH-----HHHHHHHHHHHHHHHHHHHHH-cChH-HHHHHHHHHHHHHHHHHHhhHHHHHhcCch
Confidence 355678887776554432 223334445566788777652 2222 223334444556778889999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCc------c-------
Q 021808 150 KLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPE------Q------- 216 (307)
Q Consensus 150 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt------~------- 216 (307)
+++.++...++++..++....... . ....+.............+.+ ++..+-+++..||+ +
T Consensus 317 ~vl~~~~i~~~i~~~~~~l~lp~~-~----~~~~~~~~~~~~~l~~~~G~g-ngsvfk~ip~~f~~~~~~~~~~~~~~~~ 390 (462)
T PRK15034 317 RVTLINFIFMAIFSALLFLTLPGT-G----SGNFIAFYAVFMGLFLTAGLG-SGSTFQMIAVIFRQITIYRVKMKGGSDE 390 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccc-c----ccHHHHHHHHHHHHHHHhccc-chHHHHhhHHHHhhhhhhcccccccchh
Confidence 999887776666655443332111 0 011122222222222222333 23445677889985 1
Q ss_pred --------cchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCC-chhHHHHHHHHHHHHHHHHh
Q 021808 217 --------YRGICGGMSATVNWISNLIVAQTFLTVAELVGT-GATFLILAGIAVLAVVFVIL 269 (307)
Q Consensus 217 --------~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 269 (307)
.-+...|+....+..|+++.+..+....+..+. ...+..+....+++.+..++
T Consensus 391 ~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~ 452 (462)
T PRK15034 391 QAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWL 452 (462)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 112344454444444444444333333333332 23455556666666555544
No 86
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.01 E-value=3e-08 Score=88.54 Aligned_cols=161 Identities=16% Similarity=0.086 Sum_probs=93.6
Q ss_pred hhhHHhhHHHH-HHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCC
Q 021808 100 NTVMYYSPTIV-QMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASS 178 (307)
Q Consensus 100 ~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (307)
+.+..+.+.++ +..|.+.......... ......+..+++|.++||+|||+++..+....++..+..... .+
T Consensus 27 ~~~~~~~~~~~~~~~g~s~~~~gl~~~~-~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~---~~---- 98 (400)
T PRK11646 27 FVVFPLISIRFVDQLGWAAVMVGIALGL-RQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA---HE---- 98 (400)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHH-HHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh---cc----
Confidence 34444555444 5667765554443333 333456667899999999999999988777666655544321 10
Q ss_pred CCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHH
Q 021808 179 SGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAG 258 (307)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (307)
.+...+...+ .+.......+....+..|.+|++.|+++.|+......++..+++.....+. ..++...+.+.+.
T Consensus 99 ----~~~l~~~~~l-~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~ 172 (400)
T PRK11646 99 ----PWLLWLSCIL-SGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAV 172 (400)
T ss_pred ----HHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHH
Confidence 1112222222 121121223344567789999999999999988888888777655444433 3444445555555
Q ss_pred HHHHHHHHHHhhccCC
Q 021808 259 IAVLAVVFVILFVPET 274 (307)
Q Consensus 259 ~~~~~~~~~~~~lpet 274 (307)
...+..+...++.||.
T Consensus 173 ~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 173 LFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHHHHhCCcc
Confidence 5444444444556764
No 87
>PRK11043 putative transporter; Provisional
Probab=99.00 E-value=3.3e-08 Score=88.22 Aligned_cols=154 Identities=18% Similarity=0.108 Sum_probs=82.0
Q ss_pred HHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHH
Q 021808 107 PTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIA 186 (307)
Q Consensus 107 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (307)
|.+.++.+.+..+.....+. ......++.++.|+++||+|||+.+..+.....+..+..... . + . +..
T Consensus 30 ~~i~~~~~~s~~~~g~~~s~-~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~---~-~------~-~~l 97 (401)
T PRK11043 30 KAIQADLQTSASAVSASLSL-FLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWV---E-S------A-AQL 97 (401)
T ss_pred HHHHHHHCCCHHHHHHHHHH-HHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHh---c-C------H-HHH
Confidence 33456777766655544444 444467899999999999999999887765555444433221 0 0 0 111
Q ss_pred HHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHHHHH
Q 021808 187 VIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVF 266 (307)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (307)
++...+. +.......+....+.+|.+|.+.|+...+.......++..+++.......+..++...+.+.+.+.++..+.
T Consensus 98 ~~~~~l~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~ 176 (401)
T PRK11043 98 LVLRFVQ-AVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILP 176 (401)
T ss_pred HHHHHHH-HhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 1111111 111111122233566899999988766666555555555454443333333444444455555444444433
Q ss_pred HHhhccCC
Q 021808 267 VILFVPET 274 (307)
Q Consensus 267 ~~~~lpet 274 (307)
. ++.+|.
T Consensus 177 ~-~~~~~~ 183 (401)
T PRK11043 177 T-LRLKPS 183 (401)
T ss_pred H-HHcCCC
Confidence 3 334443
No 88
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.00 E-value=2e-08 Score=90.01 Aligned_cols=135 Identities=19% Similarity=0.188 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeec
Q 021808 131 TNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNS 210 (307)
Q Consensus 131 ~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (307)
.+++|+.+++.++||+|||..+........++.++......... ..+.+.+-.+........ ......|..
T Consensus 72 G~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~--------~e~li~GR~i~Gl~~gl~-~~~~pmyl~ 142 (485)
T KOG0569|consen 72 GGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPS--------FEMLILGRLIVGLACGLS-TGLVPMYLT 142 (485)
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhh--------HHHHHHHHHHHHHHhHHH-HHHHHHHHh
Confidence 36778899999999999998887776666666665544333221 122333333322222222 234457899
Q ss_pred ccCCcccchhhhhHHHHHHHHHHHHHHHh-hHHHHHHhCCchhHHH-HHHHHHHHHHHHHhhccCCC
Q 021808 211 EVYPEQYRGICGGMSATVNWISNLIVAQT-FLTVAELVGTGATFLI-LAGIAVLAVVFVILFVPETQ 275 (307)
Q Consensus 211 ElfPt~~R~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lpet~ 275 (307)
|+-|++.||....+......+|..++... .+.+.... ..|++.. ...+..+..++...++||+.
T Consensus 143 E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~-~~W~~l~~~~~i~~~~~l~~l~~~PESP 208 (485)
T KOG0569|consen 143 EISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTE-DLWPYLLAFPLIPALLQLALLPFLPESP 208 (485)
T ss_pred hcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCC-cchHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 99999999977666555555555554222 22222111 1233322 22333333344567889984
No 89
>TIGR00898 2A0119 cation transport protein.
Probab=99.00 E-value=5.4e-09 Score=96.17 Aligned_cols=154 Identities=23% Similarity=0.267 Sum_probs=88.3
Q ss_pred hhHHHHHHcCCC---ChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCc
Q 021808 105 YSPTIVQMAGFQ---SNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGV 181 (307)
Q Consensus 105 ~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (307)
+.+.+.++.+.+ ....... .....+..+++.++.|+++||+|||++++.+..+.+++.+...+. . +
T Consensus 111 ~~~~i~~e~~l~c~~~~~~~~~-~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~-----~-~---- 179 (505)
T TIGR00898 111 FSSTIVTEWDLVCEDAWKVDLT-QSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFS-----P-N---- 179 (505)
T ss_pred ccccEEEEecceechHHHHHHH-HHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHc-----c-c----
Confidence 345555566665 3333333 334444568899999999999999999887766665555443321 1 0
Q ss_pred hhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHH
Q 021808 182 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAV 261 (307)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (307)
+ +..++ ...+.+....+..+....+.+|.+|.+.|+...++......+|.++++....... ++.+.+.+.+...+
T Consensus 180 ~-~~~~~-~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~---~wr~~~~~~~i~~~ 254 (505)
T TIGR00898 180 Y-TVFLV-FRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP---DWRWLQLAVSLPTF 254 (505)
T ss_pred H-HHHHH-HHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHH
Confidence 1 11222 2223334444446667788999999999998887765555555544332221111 12334444444444
Q ss_pred HHHHHHHhhccCCC
Q 021808 262 LAVVFVILFVPETQ 275 (307)
Q Consensus 262 ~~~~~~~~~lpet~ 275 (307)
+..+. .+++||+.
T Consensus 255 ~~~~~-~~~~~esp 267 (505)
T TIGR00898 255 LFFLL-SWFVPESP 267 (505)
T ss_pred HHHHH-HHhcCCCh
Confidence 44433 46788863
No 90
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.00 E-value=2.2e-08 Score=87.01 Aligned_cols=147 Identities=25% Similarity=0.320 Sum_probs=92.0
Q ss_pred chhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCC
Q 021808 99 INTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASS 178 (307)
Q Consensus 99 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (307)
........+.+.++.+.+..+... ..........++.++.|+++||+|||+.+..+.....+..+..... . .
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~---~-~--- 86 (352)
T cd06174 15 RGLLSPALPLLAEDLGLSASQAGL-IVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFA---S-S--- 86 (352)
T ss_pred hhhhHhhHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHh---c-c---
Confidence 344445667777777776655443 4444555578899999999999999998887777666665554332 0 0
Q ss_pred CCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHH
Q 021808 179 SGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAG 258 (307)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (307)
.+...... +..+.......+....+.+|.+|++.|++..++......++..+++.......+..++...+.+.+.
T Consensus 87 ----~~~~~~~~-~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (352)
T cd06174 87 ----LWLLLVGR-FLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAI 161 (352)
T ss_pred ----HHHHHHHH-HHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 11122222 2222223333455567889999999999999998888877777766555444444333334433333
No 91
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.99 E-value=7.3e-08 Score=86.52 Aligned_cols=169 Identities=16% Similarity=0.165 Sum_probs=92.3
Q ss_pred HcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHH
Q 021808 112 MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLA 191 (307)
Q Consensus 112 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (307)
+.+.+..+.....++.... ..+.-+..|.+.||+|.|+++..+....++..+...+......++ +.. .++...
T Consensus 64 ~~~ls~~q~g~l~ai~~l~-~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s-----~~~-lli~r~ 136 (462)
T PRK15034 64 GFNFTTDQLFLLTALPSVS-GALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTP-----FGI-FIVIAL 136 (462)
T ss_pred hcCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCC-----HHH-HHHHHH
Confidence 5677766665555544443 556666779999999999988877666555554443321111110 111 111111
Q ss_pred HHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHH-----HHhC-------------CchhH
Q 021808 192 LYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVA-----ELVG-------------TGATF 253 (307)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~-------------~~~~~ 253 (307)
+ .+.. .+..+.....+++.||++.|+++.|+....+..|..+.....+.+. ...+ .....
T Consensus 137 l-~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~ 214 (462)
T PRK15034 137 L-CGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAA 214 (462)
T ss_pred H-HHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHH
Confidence 1 1111 1122334466799999999999999987777777665544333322 1111 11122
Q ss_pred HHHHHHHHHHHHHHHhhccCC--CCCCHHHHHHHHhhc
Q 021808 254 LILAGIAVLAVVFVILFVPET--QGLTFLEVEQMWKER 289 (307)
Q Consensus 254 ~~~~~~~~~~~~~~~~~lpet--~~~~l~e~~~~~~~~ 289 (307)
.++..+.++..+..+++.++. +..++.|..+.++++
T Consensus 215 ~~~~~~~iv~~i~~~~~~~~~~~~~~~~~~~~~vlk~~ 252 (462)
T PRK15034 215 WIWVPLLAIATIAAWSGMNDIASSRASIADQLPVLQRL 252 (462)
T ss_pred HHHHHHHHHHHHHHHHhCCCccccccCHHHHHHHhCCC
Confidence 344444545555455555543 344567766666654
No 92
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.97 E-value=7e-09 Score=91.21 Aligned_cols=159 Identities=17% Similarity=0.180 Sum_probs=89.8
Q ss_pred hhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCC
Q 021808 101 TVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 180 (307)
Q Consensus 101 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (307)
....+.|.+.++.+.+..+.....+ .......++.++.|.++||+|||+++..+....++..+........
T Consensus 21 ~~~~~~~~~~~~~~~s~~~~g~~~s-~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~-------- 91 (377)
T TIGR00890 21 TWTLLAPPLGRYFGVGVTAVAIWFT-LLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSL-------- 91 (377)
T ss_pred hhhhHHHHHHHHhCCCHHHHHHHHH-HHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHH--------
Confidence 3445678888888887666554444 4445578899999999999999999887776666655443322110
Q ss_pred chhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHH
Q 021808 181 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIA 260 (307)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (307)
+...++..+. +.......+.......|.+|. .|+...++......++..++...........++...+.+.+.+.
T Consensus 92 ---~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 166 (377)
T TIGR00890 92 ---AALYLTYGLA-SAGVGIAYGIALNTAVKWFPD-KRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIF 166 (377)
T ss_pred ---HHHHHHHHHH-hHHHHHHHHhHHHHHHHHcCc-ccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 1111221111 111111112223455777874 59888888766665665544433333333334444555555555
Q ss_pred HHHHHHHHhhccC
Q 021808 261 VLAVVFVILFVPE 273 (307)
Q Consensus 261 ~~~~~~~~~~lpe 273 (307)
.+..+...++.||
T Consensus 167 ~~~~~~~~~~~~~ 179 (377)
T TIGR00890 167 LLVIVLGAFLIGY 179 (377)
T ss_pred HHHHHHHHHheec
Confidence 5555544455543
No 93
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.97 E-value=1.1e-08 Score=93.43 Aligned_cols=150 Identities=11% Similarity=0.063 Sum_probs=73.8
Q ss_pred HHhhHHHHH-HcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchH-----HH--HHhHHHHHHHHHHHHHHHhhcC
Q 021808 103 MYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKK-----LA--LSSLAGVIISLVLLSWAFISGS 174 (307)
Q Consensus 103 ~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~-----~l--~~~~~~~~~~~~~~~~~~~~~~ 174 (307)
..+.|.++. ..|.+..+. ........++.+++.+++|+++||+|||+ .. .....+.++..+. .. .
T Consensus 272 ~~~~p~~l~~~~g~s~~~a-~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~----~~-~- 344 (476)
T PLN00028 272 DNIIAEYFYDRFGLSLETA-GAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIW----LG-R- 344 (476)
T ss_pred HhHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHH----hc-c-
Confidence 345566654 457765443 34444555667899999999999999762 11 1111111111111 11 0
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHH
Q 021808 175 SASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFL 254 (307)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (307)
.. . ....+....++..... +..+..+.+.+|+.| +.|++..|+....+.+++++++.... .....+....+.
T Consensus 345 ~~---~--~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~ 416 (476)
T PLN00028 345 AN---S--LGAAIVVMILFSIFVQ-AACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGIS 416 (476)
T ss_pred cc---h--HHHHHHHHHHHHHHHH-HhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHH
Confidence 00 0 0111222222222221 122334566678755 68999999887777677766554331 111111223455
Q ss_pred HHHHHHHHHHHHH
Q 021808 255 ILAGIAVLAVVFV 267 (307)
Q Consensus 255 ~~~~~~~~~~~~~ 267 (307)
+.+++.+++.+..
T Consensus 417 ~~~~~~~i~~~~~ 429 (476)
T PLN00028 417 LMGVMIIACTLPV 429 (476)
T ss_pred HHHHHHHHHHHHH
Confidence 5555555554433
No 94
>PTZ00207 hypothetical protein; Provisional
Probab=98.97 E-value=5.8e-08 Score=89.64 Aligned_cols=162 Identities=14% Similarity=0.132 Sum_probs=91.3
Q ss_pred hhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCC
Q 021808 100 NTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSS 179 (307)
Q Consensus 100 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (307)
+....+.+.+.+..|.+..+.....++ .... ....+.+|++.||+|||++++++.+...+..+.........-..
T Consensus 44 y~fsv~s~~L~~~lgls~~~l~~i~sv-g~~~-g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~--- 118 (591)
T PTZ00207 44 YAFNLISGAMQARYNLTQRDLSTITTV-GIAV-GYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEG--- 118 (591)
T ss_pred HHHHHHHHHHHHHhCcCHHHHHHHHHH-HHHH-HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccC---
Confidence 445567788888888877665544433 2222 23455789999999999999988887777766554421110000
Q ss_pred CchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHH
Q 021808 180 GVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGI 259 (307)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (307)
. .+...+...+. +.......+.....+.+.|| +.|+++.|+......+|+.+.+..+..... .++...+.+.+.+
T Consensus 119 s--~~~l~l~r~l~-G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl 193 (591)
T PTZ00207 119 S--VVRLSVYNGLM-TLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSF 193 (591)
T ss_pred c--HHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHH
Confidence 1 11111111111 11111112222345678898 669999999988888887665554444332 2233445555555
Q ss_pred HHHHHHHHHhhc
Q 021808 260 AVLAVVFVILFV 271 (307)
Q Consensus 260 ~~~~~~~~~~~l 271 (307)
.++..+....++
T Consensus 194 ~~vv~ll~~~~v 205 (591)
T PTZ00207 194 ALVVGILAIVFM 205 (591)
T ss_pred HHHHHHHHHhhe
Confidence 555444444444
No 95
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.97 E-value=4.8e-08 Score=87.28 Aligned_cols=158 Identities=16% Similarity=0.112 Sum_probs=86.3
Q ss_pred CchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHH-HhHHHHHHHHHHHHHHHhhcCCC
Q 021808 98 GINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLAL-SSLAGVIISLVLLSWAFISGSSA 176 (307)
Q Consensus 98 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~-~~~~~~~~~~~~~~~~~~~~~~~ 176 (307)
+.+....|.|.+.++.|.+..+.... .......+.++.++.|+++||+|||+.+. .+....+++...+....... ..
T Consensus 237 ~~~~~~~~~p~~~~~~g~s~~~~~~~-~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~-~~ 314 (402)
T TIGR00897 237 GLFGFAVFLPMFVAELGFSTSEWLQI-WGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHF-GH 314 (402)
T ss_pred HHHHHHHHHHHHHHHcCCChhHHHHH-HHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHcc-CC
Confidence 34455567888888888766543333 33344557889999999999999988763 22222222222221111100 00
Q ss_pred CCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHH
Q 021808 177 SSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLIL 256 (307)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (307)
. .+.......+.... ..+..+.. ...+|..|. .|+++.|+.+....+++.+++.....+.+..+....+.+.
T Consensus 315 ---~--~~~~~~~~~~~G~~-~~~~~~~~-~~~~~~~~~-~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~ 386 (402)
T TIGR00897 315 ---S--FAVALIIAIALGIF-LAGYVPLA-AVFPTLAPK-HKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIF 386 (402)
T ss_pred ---c--HHHHHHHHHHHHHH-HHHHHHHH-HHHHhhCcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH
Confidence 0 01111111111111 11222332 345687665 7999999988888888887776665566555544445555
Q ss_pred HHHHHHHHH
Q 021808 257 AGIAVLAVV 265 (307)
Q Consensus 257 ~~~~~~~~~ 265 (307)
+.+.++..+
T Consensus 387 a~~~~i~~~ 395 (402)
T TIGR00897 387 AALYVVSAF 395 (402)
T ss_pred HHHHHHHHH
Confidence 555544443
No 96
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.97 E-value=3.7e-08 Score=87.80 Aligned_cols=143 Identities=14% Similarity=0.009 Sum_probs=77.1
Q ss_pred hhHHhhHHH-HHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCC
Q 021808 101 TVMYYSPTI-VQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSS 179 (307)
Q Consensus 101 ~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (307)
....+.|.+ .+..|.+..+.....+ .......++.++.|.++||+|||+++..+....++..+.........+. .
T Consensus 33 ~~~~~l~~~i~~~~g~s~~~~g~~~~-~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~---~ 108 (399)
T PRK05122 33 LPLAVLPGYVHDQLGFSAFLAGLVIS-LQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAW---P 108 (399)
T ss_pred HHHHHHHHHHHHhcCccHHHHHHHHH-HHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhcc---c
Confidence 333455554 4566776655444434 4444578889999999999999999988766655544333222111110 0
Q ss_pred CchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhC
Q 021808 180 GVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 248 (307)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (307)
. .....+.....+.+.......+....+..|.+|.+.|+++.|+.......+..++......+....+
T Consensus 109 ~-~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g 176 (399)
T PRK05122 109 V-LSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGG 176 (399)
T ss_pred h-hHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHccc
Confidence 0 0011111111122222222333444566899999999988887655555555444443333333334
No 97
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.95 E-value=1.2e-08 Score=92.93 Aligned_cols=136 Identities=13% Similarity=0.046 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccce
Q 021808 128 VAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWT 207 (307)
Q Consensus 128 ~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (307)
......++.+++|+++||+|||+.+..+....++..+...+... .. . + .++...++.+....+..+....
T Consensus 85 ~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~--~~------~-~-~l~~~r~~~G~~~~~~~~~~~~ 154 (465)
T TIGR00894 85 HFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAG--GG------I-A-LVVFCRVIQGLAQGSVSPATHK 154 (465)
T ss_pred HHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHH--cC------c-h-HHHHHHHHHHHhcccchhhHHH
Confidence 33447788999999999999999988776665555444322111 00 0 1 1222233334444455566668
Q ss_pred eecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHh-CCchhHHHHHHHHHHHHHHHHhhccC
Q 021808 208 LNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELV-GTGATFLILAGIAVLAVVFVILFVPE 273 (307)
Q Consensus 208 ~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~lpe 273 (307)
+.+|.+|++.|++..|+......++..++......+.+.. ++...+.+.+.+.++..+..+++.||
T Consensus 155 ~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~ 221 (465)
T TIGR00894 155 IIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPAD 221 (465)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcC
Confidence 8899999999999999988877788777766555444442 55556666555555444444444444
No 98
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.95 E-value=1.2e-08 Score=89.62 Aligned_cols=128 Identities=9% Similarity=0.036 Sum_probs=70.9
Q ss_pred hhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCC
Q 021808 101 TVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 180 (307)
Q Consensus 101 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (307)
....+.|.+.+..|.+..+.............+++.+++++++||+|||+.+..+..+.++....+.+........+...
T Consensus 227 ~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (356)
T TIGR00901 227 AATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITF 306 (356)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCccccccc
Confidence 34445666666677765554444444443446788999999999999999887666555554443322211100000000
Q ss_pred chhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHH
Q 021808 181 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVN 229 (307)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~ 229 (307)
...+....+..+ ..+......+....+..|.+|++.|++..|+..+..
T Consensus 307 ~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 354 (356)
T TIGR00901 307 PHLLMLFLTITL-EAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLS 354 (356)
T ss_pred chHHHHHHHHHH-HHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHH
Confidence 011212222211 122222334555688899999999999888865543
No 99
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.94 E-value=8.7e-08 Score=87.45 Aligned_cols=154 Identities=18% Similarity=0.078 Sum_probs=93.5
Q ss_pred cCchhhHHhhHHHHHH---cCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCchHHHHHhHHHHHHHHHHHHHHHhh
Q 021808 97 TGINTVMYYSPTIVQM---AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH-FGRKKLALSSLAGVIISLVLLSWAFIS 172 (307)
Q Consensus 97 ~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr-~GrR~~l~~~~~~~~~~~~~~~~~~~~ 172 (307)
.+++.+..++|.+++. .|.+..+.... .........++.+++|+++|| +|||++++.+....++..+.+...
T Consensus 24 ~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~-~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~--- 99 (475)
T TIGR00924 24 FSYYGMQGILAVYLVQQAGLGFSQEQAFII-FGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMS--- 99 (475)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCHHHHHHH-HHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhc---
Confidence 3455566677777765 56665554444 344445578899999999999 899999988777666655544321
Q ss_pred cCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCccc---chhhhhHHHHHHHHHHHHHHHhhHHHHHHhCC
Q 021808 173 GSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQY---RGICGGMSATVNWISNLIVAQTFLTVAELVGT 249 (307)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~---R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (307)
. + .+....+..+ .+.......+....+.++.+|++. |+++.++.+...++|+.+++.....+.+..++
T Consensus 100 --~-~-----~~~~~~~~~l-~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~ 170 (475)
T TIGR00924 100 --I-Y-----PDLIFYGLGT-IAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGY 170 (475)
T ss_pred --c-c-----HhHHHHHHHH-HHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 0 0 0112222222 122222234455577889998764 87788888888888888777665555555555
Q ss_pred chhHHHHHHHHHHH
Q 021808 250 GATFLILAGIAVLA 263 (307)
Q Consensus 250 ~~~~~~~~~~~~~~ 263 (307)
...|...+..++++
T Consensus 171 ~~~f~~~~~~~~~~ 184 (475)
T TIGR00924 171 HVGFNLAAVGMVIG 184 (475)
T ss_pred HHHHHHHHHHHHHH
Confidence 44555444433333
No 100
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.94 E-value=2.8e-08 Score=90.54 Aligned_cols=158 Identities=18% Similarity=0.146 Sum_probs=78.4
Q ss_pred cchhhhhcchhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 021808 69 VRYLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFG 147 (307)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~G 147 (307)
.++.+.++++..+...+.. +....+.+....|.|.++.+ .|.+....... .........++.+++|+++||++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~-~~~~~~~~~i~~~~~g~l~d~~~ 325 (465)
T TIGR00894 252 LPIKAIPKSLPVWAIWFAI-----FGHFWLYTILPTYLPTFISWVLRVSGKENGLL-SSLPYLFAWLCSIFAGYLADFLK 325 (465)
T ss_pred CCHHHHhcCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhCcChHHhHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 3466777776655443322 22233345555678877654 56665554443 33344557889999999999987
Q ss_pred chHHHH------HhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhh
Q 021808 148 RKKLAL------SSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGIC 221 (307)
Q Consensus 148 rR~~l~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~ 221 (307)
+|+... .......+......+....... .. ...+..+.+..+. ..+..+..+....|..|. .+++.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~-~~g~~ 397 (465)
T TIGR00894 326 SSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSA----AF--YLTIIILTLANAV-SSGPLAGVLINSLDLAPR-FLGFI 397 (465)
T ss_pred HcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCC----ch--HHHHHHHHHHHHH-hhhhhhhhhhchhhcChh-HHHHH
Confidence 553210 0001111110111111111111 00 1112222222121 222222333455677765 78888
Q ss_pred hhHHHHHHHHHHHHHHHhh
Q 021808 222 GGMSATVNWISNLIVAQTF 240 (307)
Q Consensus 222 ~g~~~~~~~~~~~~~~~~~ 240 (307)
.|+....+.++.++++...
T Consensus 398 ~g~~~~~~~l~~~i~p~l~ 416 (465)
T TIGR00894 398 KGITGLPGFIGGLIASTLA 416 (465)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 8888888887777665443
No 101
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.93 E-value=2.2e-07 Score=84.36 Aligned_cols=174 Identities=22% Similarity=0.327 Sum_probs=107.1
Q ss_pred CchhhHHhhHHHHH-HcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCch--HHHHHhHHHHHHHHHHHHHHHhhcC
Q 021808 98 GINTVMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRK--KLALSSLAGVIISLVLLSWAFISGS 174 (307)
Q Consensus 98 ~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR--~~l~~~~~~~~~~~~~~~~~~~~~~ 174 (307)
+.+.+......+.+ ..|.+..+ .....+...+++++|+++.+++.||+|.| ++++.+.....+..+.-........
T Consensus 296 g~~ti~~~~~i~a~~~lg~s~~~-l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~ 374 (477)
T PF11700_consen 296 GVNTIISFAGIYATEVLGMSTTQ-LIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSF 374 (477)
T ss_pred HHHHHHHHHHHHHHHhcCcCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 33444444444444 56776655 45667777778999999999999999999 7766554433222211111011111
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhC-CchhH
Q 021808 175 SASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG-TGATF 253 (307)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 253 (307)
.+. .. .+. +....+..+.+..+..+..-.+.+|+-|+...+...|+....+..++++++..+....+..+ ....+
T Consensus 375 ~g~-~~--~~~-f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~ 450 (477)
T PF11700_consen 375 FGL-KS--PWE-FWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGF 450 (477)
T ss_pred cCc-cc--HHH-HHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHH
Confidence 000 11 111 12222233444445566777889999999999999999999999999999888877777666 33444
Q ss_pred HHHHHHHHHHHHHHHhhccCCCCC
Q 021808 254 LILAGIAVLAVVFVILFVPETQGL 277 (307)
Q Consensus 254 ~~~~~~~~~~~~~~~~~lpet~~~ 277 (307)
.....+.+++.+ +.+..++.|++
T Consensus 451 ~~l~~lf~~gl~-ll~~v~~~~g~ 473 (477)
T PF11700_consen 451 LFLLVLFLIGLI-LLFFVDVEKGR 473 (477)
T ss_pred HHHHHHHHHHHH-HHhhccchhhh
Confidence 444444444444 44667777776
No 102
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.93 E-value=8.5e-08 Score=84.84 Aligned_cols=127 Identities=17% Similarity=0.182 Sum_probs=68.0
Q ss_pred hHHhhHHHHH-HcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCC
Q 021808 102 VMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 180 (307)
Q Consensus 102 ~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (307)
...+.|.+++ ..+.+..+.. .......+..+++.++.+++.||+|||+.+..+.....+..+.+......... .
T Consensus 225 ~~~~~~~~~~~~~g~~~~~~g-~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 299 (385)
T TIGR00710 225 FFSGAPFVYIDIMGVSPSVFG-LLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLG----S 299 (385)
T ss_pred HHHcChHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccc----h
Confidence 3445566655 5666554433 33444455578899999999999999998876655544444333222111100 0
Q ss_pred chhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHH
Q 021808 181 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVA 237 (307)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~ 237 (307)
.........+. +.......+....+..|.+|. .|+++.++.......++.+.+
T Consensus 300 --~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~g~i~~ 352 (385)
T TIGR00710 300 --WAMIIGPMMFV-GIGNSMISSIAMAYALEDFPH-VAGTASALFGTLRLVLGAIVG 352 (385)
T ss_pred --HHHHHHHHHHH-HHHHHHHHHHHHHHHhccCcc-cchHHHHHHHHHHHHHHHHHH
Confidence 01111111111 111112233444666788884 588888887766654443333
No 103
>PRK12382 putative transporter; Provisional
Probab=98.93 E-value=6.2e-08 Score=86.21 Aligned_cols=130 Identities=15% Similarity=0.063 Sum_probs=70.4
Q ss_pred hhHHH-HHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchh
Q 021808 105 YSPTI-VQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 183 (307)
Q Consensus 105 ~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (307)
..|.+ .++.|.+..+.....+. ......++.++.|+++||+|||++++.+.....++.+............ ....
T Consensus 37 ~l~~~l~~~lg~s~~~~g~~~s~-~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 112 (392)
T PRK12382 37 VIPLFVHHDLGFGNTMVGIAVGI-QFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSA---PFKF 112 (392)
T ss_pred hhhHHHHHhcCCcHHHHHHHHHH-HHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccch---hHHH
Confidence 34443 45667766665544444 4444678899999999999999998877665554433221111100000 0001
Q ss_pred HHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHh
Q 021808 184 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQT 239 (307)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~ 239 (307)
+..+++..+ .+.......+....+..|.+|++.|+++.|+.......+..+++..
T Consensus 113 ~~l~~~r~l-~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~ 167 (392)
T PRK12382 113 ALLVVGRLI-LGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPL 167 (392)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHH
Confidence 111222111 1111111122333566899999999999888665555555554443
No 104
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.92 E-value=3.9e-08 Score=87.83 Aligned_cols=124 Identities=10% Similarity=-0.082 Sum_probs=72.4
Q ss_pred hhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCC
Q 021808 101 TVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 180 (307)
Q Consensus 101 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (307)
....+.+.+.+..|.+..+..... ........++.++.|.++||+|||+++..+....+++.+..... .. ...+
T Consensus 31 ~~~~~~~~~~~~~g~s~~~~g~~~-~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~-~~-~~~~--- 104 (402)
T TIGR00897 31 LEQGWLSPFLKALGLSPQQSASAF-TLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVF-GL-GHAN--- 104 (402)
T ss_pred hHHHhHHHHHHHhCCCHHHhHHHH-HHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH-hc-cCcc---
Confidence 334466667778888766655544 44445578899999999999999999887766665554332111 11 0000
Q ss_pred chhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHH
Q 021808 181 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISN 233 (307)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~ 233 (307)
.+..+....+ .+.......+....+..+.+|++.|+++.|+......++.
T Consensus 105 --~~~l~~~~~i-~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 154 (402)
T TIGR00897 105 --YPLILLFYGI-RGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGI 154 (402)
T ss_pred --HHHHHHHHHH-HHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 0111111111 1111111122223456788999999999999877766654
No 105
>PRK09952 shikimate transporter; Provisional
Probab=98.92 E-value=8.1e-08 Score=86.82 Aligned_cols=102 Identities=16% Similarity=0.111 Sum_probs=60.0
Q ss_pred HHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecc
Q 021808 132 NAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSE 211 (307)
Q Consensus 132 ~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 211 (307)
..++.++.|+++||+|||+.+..+....+++.+...+..... .. .+.....+...-...+....+..+....+.+|
T Consensus 77 ~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e 152 (438)
T PRK09952 77 RPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFS---TI-GWWAPVLLVTLRAIQGFAVGGEWGGAALLAVE 152 (438)
T ss_pred HhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHH---HH-HHHHHHHHHHHHHHHHhhhcccHHHHHHHHHH
Confidence 557788889999999999999887776666655543321000 00 00001112222223333333444455678899
Q ss_pred cCCcccchhhhhHHHHHHHHHHHHHH
Q 021808 212 VYPEQYRGICGGMSATVNWISNLIVA 237 (307)
Q Consensus 212 lfPt~~R~~~~g~~~~~~~~~~~~~~ 237 (307)
.+|.+.|+...+.......+|..++.
T Consensus 153 ~~p~~~rg~~~~~~~~g~~~G~~l~~ 178 (438)
T PRK09952 153 SAPKNKKAFYSSGVQVGYGVGLLLST 178 (438)
T ss_pred hCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999998877766555555554443
No 106
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.92 E-value=6.7e-08 Score=97.57 Aligned_cols=139 Identities=13% Similarity=0.023 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccc
Q 021808 127 AVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPW 206 (307)
Q Consensus 127 ~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (307)
...+..++.++++|+++||+|||+++.......++............+ .+..+++ .++.+.......+...
T Consensus 60 ~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s--------~~~l~~~-~~l~gi~~a~~~p~~~ 130 (1140)
T PRK06814 60 VFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNS--------VPLLFAA-LFLMGIHSALFGPIKY 130 (1140)
T ss_pred HHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhh--------HHHHHHH-HHHHHHHHHhhchHHH
Confidence 344446778899999999999999764322221111111111111111 1222222 2223333444567777
Q ss_pred eeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCC
Q 021808 207 TLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQ 275 (307)
Q Consensus 207 ~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~ 275 (307)
+++++++|.+.|+.+.|+..+...++..+++.....+....++...+ +..++..+..+++.+++|+++
T Consensus 131 a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 198 (1140)
T PRK06814 131 SILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILV-ALLMGIAVLGWLASLFIPKTG 198 (1140)
T ss_pred HhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHH-HHHHHHHHHHHHHHhhCCCCC
Confidence 89999999999999999988888888777765554444444433333 333333333333445566653
No 107
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.92 E-value=7.7e-08 Score=85.71 Aligned_cols=119 Identities=10% Similarity=0.074 Sum_probs=75.5
Q ss_pred hHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHH
Q 021808 106 SPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWI 185 (307)
Q Consensus 106 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (307)
.+.+.++.+.+..... +..........+..+++|.++||+|||++++.+....++..+...+.. . .
T Consensus 26 ~~~~~~~~~~s~~~~~-~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~----~--------~- 91 (393)
T PRK11195 26 AIALLKELHYPDWSQP-LLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGI----H--------P- 91 (393)
T ss_pred HHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHH----H--------H-
Confidence 3444566666554433 334444455778899999999999999999887766655544332210 0 0
Q ss_pred HHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhh
Q 021808 186 AVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTF 240 (307)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~ 240 (307)
+... ++.+.......|...++.+|++|.+.|+++.|+.......+..+++..-
T Consensus 92 -~~~r-~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lg 144 (393)
T PRK11195 92 -LLAY-GLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLG 144 (393)
T ss_pred -HHHH-HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 1122333344566678889999999999999988777766666655443
No 108
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.90 E-value=1.2e-07 Score=84.81 Aligned_cols=148 Identities=13% Similarity=0.130 Sum_probs=70.8
Q ss_pred HHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHH
Q 021808 107 PTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIA 186 (307)
Q Consensus 107 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (307)
+.+.+..|.+..+..........+..+++.++++++.||+|||+.+..+....++..+.+.......+. .+..
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~-------~~~~ 306 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKH-------LWTM 306 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCc-------HHHH
Confidence 445556777655444433333333467889999999999999998765554444333322211111110 0111
Q ss_pred HHHHH---HHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHH
Q 021808 187 VIGLA---LYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 263 (307)
Q Consensus 187 ~~~~~---~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (307)
..+.. +..........+....++.+.+|.+.++...+ ...++...++.....+.+..+....+...+.++.++
T Consensus 307 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~ 382 (402)
T PRK11902 307 ALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYALLSA----LASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPG 382 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHH
Confidence 21111 11111122223344467788888776643222 223333323333333445555544455555444444
Q ss_pred HH
Q 021808 264 VV 265 (307)
Q Consensus 264 ~~ 265 (307)
.+
T Consensus 383 ~~ 384 (402)
T PRK11902 383 LA 384 (402)
T ss_pred HH
Confidence 33
No 109
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.89 E-value=1.4e-07 Score=95.27 Aligned_cols=108 Identities=12% Similarity=0.106 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccce
Q 021808 128 VAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWT 207 (307)
Q Consensus 128 ~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (307)
......++.+++|+++||+|||++++.+..+.++..+...+.....+ .+..+++ .++.+.......+..+.
T Consensus 56 ~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~--------~~~l~~~-r~l~G~~~~~~~~~~~~ 126 (1146)
T PRK08633 56 FLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGW--------FWLAFAV-TFLLGAQSAIYSPAKYG 126 (1146)
T ss_pred HHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHcc--------HHHHHHH-HHHHHHHHHhhchHHHh
Confidence 33345678899999999999999988765544443333222211111 1112222 22223333344556668
Q ss_pred eecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHH
Q 021808 208 LNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVA 244 (307)
Q Consensus 208 ~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~ 244 (307)
+++|++|.+.|+++.|+......++.++++.....+.
T Consensus 127 ~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~ 163 (1146)
T PRK08633 127 IIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLF 163 (1146)
T ss_pred hhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999988887777776655544443
No 110
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.89 E-value=8.8e-08 Score=86.41 Aligned_cols=111 Identities=14% Similarity=0.180 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccc
Q 021808 125 SLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPV 204 (307)
Q Consensus 125 ~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (307)
.....+..+++.++.++++||+|||+.+..+....++..+.+.+. . . . .+...+...+. ........+.
T Consensus 263 ~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~--~-~-----~--~~~~~~~~~~~-g~~~~~~~~~ 331 (437)
T TIGR00792 263 GSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFA--G-S-----N--LPLILVLIILA-GFGQNFVTGL 331 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc--c-h-----h--HHHHHHHHHHH-HHHHHHHHHH
Confidence 334455677889999999999999999877765555544333211 1 0 0 01111111111 1111222344
Q ss_pred cceeecccCC-------cccchhhhhHHHHHHHHHHHHHHHhhHHHHHH
Q 021808 205 PWTLNSEVYP-------EQYRGICGGMSATVNWISNLIVAQTFLTVAEL 246 (307)
Q Consensus 205 ~~~~~~ElfP-------t~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 246 (307)
.+.+.+|..| .+.+++..|+......++..+++.....+.+.
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~ 380 (437)
T TIGR00792 332 VWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGI 380 (437)
T ss_pred HHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566777754 45567777887777777777666555555443
No 111
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.89 E-value=3.3e-08 Score=89.82 Aligned_cols=150 Identities=15% Similarity=0.103 Sum_probs=77.7
Q ss_pred hhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhccc--CchHHHHHhHHHHHHHHHHHHHHHhhcCCCCC
Q 021808 101 TVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHF--GRKKLALSSLAGVIISLVLLSWAFISGSSASS 178 (307)
Q Consensus 101 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~--GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (307)
....|.+.+.+..+.+....+...+ ......+++.+++++++||. ++|+....+..........+... .. ..
T Consensus 259 ~~~~~l~~~~~~~g~s~~~~g~~~~-~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~-~~-~~--- 332 (455)
T TIGR00892 259 APIIFLVPYAKDKGVDEYEAAFLLS-IIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCA-LA-GD--- 332 (455)
T ss_pred chHHHHHHHHHHcCCCHHHHHHHHH-HHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHH-Hh-ch---
Confidence 3345666677777776554444333 34445677888899999973 33433332211111111111111 11 10
Q ss_pred CCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhC-CchhHHHHH
Q 021808 179 SGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG-TGATFLILA 257 (307)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 257 (307)
. +..++ ..++.+....+..+..+.+..|.+|.+.|+++.|+......++..+++.....+.+..+ ....+.+.+
T Consensus 333 ---~-~~~~i-~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~ 407 (455)
T TIGR00892 333 ---Y-TGLVI-YCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASG 407 (455)
T ss_pred ---H-HHHHH-HHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhh
Confidence 1 11111 12222222223344556777899999999999999888888888777655544444333 233444433
Q ss_pred HHHH
Q 021808 258 GIAV 261 (307)
Q Consensus 258 ~~~~ 261 (307)
.+.+
T Consensus 408 ~~~l 411 (455)
T TIGR00892 408 SIVV 411 (455)
T ss_pred HHHH
Confidence 3333
No 112
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.89 E-value=9.9e-08 Score=84.13 Aligned_cols=159 Identities=17% Similarity=0.146 Sum_probs=82.0
Q ss_pred HhhHHHH-HHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHH-hHHHHHHHHHHHHHHHhhcCCCCCCCc
Q 021808 104 YYSPTIV-QMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALS-SLAGVIISLVLLSWAFISGSSASSSGV 181 (307)
Q Consensus 104 ~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (307)
...|.++ ++.|.+........+ .......+..++.|.++||+|||+.++. +....++..+.... . . +
T Consensus 18 ~~l~~~l~~~~g~s~~~~g~~~~-~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~---~--~-~---- 86 (375)
T TIGR00899 18 PTLSLFLSEEVRARPAMIGLFYT-GSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW---N--R-N---- 86 (375)
T ss_pred hHHHHHHHcccCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh---c--c-h----
Confidence 3344444 456776555444333 3334467788899999999999887543 33333333222211 0 1 0
Q ss_pred hhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhh--hhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHH
Q 021808 182 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGIC--GGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGI 259 (307)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (307)
+ +..++.. ...........+....+..|..|.+.|+.+ .+.....+.++..+++.......+..++...+.+.+.+
T Consensus 87 ~-~~l~~~~-~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~ 164 (375)
T TIGR00899 87 Y-FLLLVLG-VLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALA 164 (375)
T ss_pred H-HHHHHHH-HHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHH
Confidence 1 1111111 111222222344445667788888777533 34444444455555544433344444555566666665
Q ss_pred HHHHHHHHHhhccCCC
Q 021808 260 AVLAVVFVILFVPETQ 275 (307)
Q Consensus 260 ~~~~~~~~~~~lpet~ 275 (307)
.++..+...+++||.+
T Consensus 165 ~~~~~~~~~~~~~~~~ 180 (375)
T TIGR00899 165 FVLCGVLVWLFLPSYP 180 (375)
T ss_pred HHHHHHHHHHhCCCcc
Confidence 5555555556678754
No 113
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.89 E-value=8.2e-08 Score=97.00 Aligned_cols=121 Identities=18% Similarity=0.046 Sum_probs=70.9
Q ss_pred HhhHHHH-HHcCCCCh-HHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCc
Q 021808 104 YYSPTIV-QMAGFQSN-QLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGV 181 (307)
Q Consensus 104 ~~~~~~~-~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (307)
.+.|.++ +..|.+.. .... ......+..+++.++.++++||+++|+++.++.++.+++.+.+.+.. .
T Consensus 253 ~~~~~~~~~~~g~s~~~~~g~-~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~----~------ 321 (1146)
T PRK08633 253 ANFPAYAKEVLGLDNTFQVQY-LLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAP----S------ 321 (1146)
T ss_pred HhhHHHHHHHhCCCcHHHHHH-HHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhh----h------
Confidence 3444444 45666655 3333 34444455678899999999999999887766555554444332210 0
Q ss_pred hhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHH
Q 021808 182 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVA 237 (307)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~ 237 (307)
.+..+++..++..+. .+..+....+..+..|++.|+++.|+......++..++.
T Consensus 322 -~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~ 375 (1146)
T PRK08633 322 -LASVLVLFFLFGFSA-GLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFL 375 (1146)
T ss_pred -HHHHHHHHHHHHHHH-HHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHH
Confidence 111222222222222 222334457778999999999999988877777665443
No 114
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.89 E-value=1.8e-07 Score=83.85 Aligned_cols=130 Identities=16% Similarity=0.044 Sum_probs=79.5
Q ss_pred HhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchh
Q 021808 104 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 183 (307)
Q Consensus 104 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (307)
...|.+.+..+.+..+.... .........++.+..+++.||+|||+.++.+....++....+....... + +
T Consensus 24 ~l~~~~~~~~~~s~~~~g~l-~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~-~------~- 94 (410)
T TIGR00885 24 PMVPQFQQAFTLTAFQAALV-QSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIM-N------Y- 94 (410)
T ss_pred HHHHHHHHHhCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhc-c------H-
Confidence 45677777888876655444 4444555788999999999999999999888777666655432211110 0 1
Q ss_pred HHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHH
Q 021808 184 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTV 243 (307)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~ 243 (307)
+..+....+.....+ ...+....+..++.|.+.|++..++.+....+|+.+++.....+
T Consensus 95 ~~~l~~~~l~G~g~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l 153 (410)
T TIGR00885 95 TLFLVGLFILTAGLG-FLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQL 153 (410)
T ss_pred HHHHHHHHHHHhhHH-HHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111222211111111 11222235667888999999888888888888877766554433
No 115
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.87 E-value=1.4e-07 Score=83.99 Aligned_cols=131 Identities=15% Similarity=0.069 Sum_probs=81.1
Q ss_pred hhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCC
Q 021808 101 TVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 180 (307)
Q Consensus 101 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (307)
......|.+.+..+.+..+.....+.... ...++.++.|+++||+|||+++..+....+++.+..... . +
T Consensus 27 ~~~~~lp~i~~~~~~s~~~~g~~~s~~~~-~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a-----~-~--- 96 (393)
T PRK09705 27 SVGPLLPQLRQASGMSFSVAALLTALPVV-TMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELY-----P-Q--- 96 (393)
T ss_pred ccchhHHHHHHHhCCCHHHHHHHHHHHHH-HHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHC-----c-c---
Confidence 34456788888888877666555555444 467889999999999999999998887777776655431 1 1
Q ss_pred chhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHH
Q 021808 181 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAE 245 (307)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~ 245 (307)
+ ...+.+. +..+.......+....+..+.|| +.|+...|+.......+..++....+.+..
T Consensus 97 -~-~~ll~~r-~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~ 157 (393)
T PRK09705 97 -S-ALLLSSA-LLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQ 157 (393)
T ss_pred -h-HHHHHHH-HHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 1111221 11222122223344456788898 668888888766655666555554444443
No 116
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.86 E-value=1.9e-07 Score=81.10 Aligned_cols=155 Identities=28% Similarity=0.355 Sum_probs=98.9
Q ss_pred CchhhHHhhHHHHHHc-CCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchH-HHHHhHHHHHHHHHHHHHHHhhcCC
Q 021808 98 GINTVMYYSPTIVQMA-GFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKK-LALSSLAGVIISLVLLSWAFISGSS 175 (307)
Q Consensus 98 ~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~-~l~~~~~~~~~~~~~~~~~~~~~~~ 175 (307)
.......+.+.+.++. +.+..+ .............++.++.+++.||+|||+ .+..+.....++.+..... .+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~- 264 (352)
T cd06174 190 GYYGLLTYLPLYLQEVLGLSAAE-AGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALA---PS- 264 (352)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh---cc-
Confidence 3444455667776665 554443 344455556667889999999999999999 7776666555554443321 00
Q ss_pred CCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHH
Q 021808 176 ASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLI 255 (307)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (307)
.+....... ..........+....+..|.+|++.|++..|+......++..+++.......+..+....+.+
T Consensus 265 -------~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~ 336 (352)
T cd06174 265 -------LALLLVALL-LLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLI 336 (352)
T ss_pred -------HHHHHHHHH-HHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHH
Confidence 111222222 223333444566678889999999999999999999988888877766555554454455566
Q ss_pred HHHHHHHHHH
Q 021808 256 LAGIAVLAVV 265 (307)
Q Consensus 256 ~~~~~~~~~~ 265 (307)
.+.+..++.+
T Consensus 337 ~~~~~~i~~i 346 (352)
T cd06174 337 LAALALLAAL 346 (352)
T ss_pred HHHHHHHHHH
Confidence 6665555544
No 117
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.85 E-value=2.2e-08 Score=91.95 Aligned_cols=105 Identities=22% Similarity=0.201 Sum_probs=64.3
Q ss_pred hHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHH
Q 021808 106 SPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWI 185 (307)
Q Consensus 106 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (307)
.+.+.+..|.+++. . +.+........++.++.|.++|.+|||..++.+.++.++..++..-. . + ...
T Consensus 67 l~~I~~diG~~~~~-~-w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA-----~-~-----~~~ 133 (599)
T PF06609_consen 67 LPYINADIGGSDNW-S-WFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATA-----Q-N-----MNT 133 (599)
T ss_pred HHHHHHhcCCCccc-h-HHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcC-----C-c-----HHH
Confidence 45667777776543 3 44555556678888999999999999999988777666655543211 1 0 011
Q ss_pred HHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHH
Q 021808 186 AVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMS 225 (307)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~ 225 (307)
.+.+..+... +.|...+.+...+|+.|.|.|..+.++.
T Consensus 134 ~iag~~l~Gv--gaG~~~~~~~~isEl~p~k~R~~~~~~~ 171 (599)
T PF06609_consen 134 FIAGMVLYGV--GAGVQELAALAISELVPNKWRGLGLAIA 171 (599)
T ss_pred HHHHHHHHHH--hhHHHHHHHHHHHHhcccchhhhHhHHH
Confidence 2223222222 2233334455679999999997655443
No 118
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.85 E-value=7.9e-08 Score=88.89 Aligned_cols=135 Identities=21% Similarity=0.250 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccc
Q 021808 125 SLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPV 204 (307)
Q Consensus 125 ~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (307)
.....+...+|+++.|+++||+|||++++.+.....++.+...+.. ........-.+.+++..+...+
T Consensus 124 ~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~------------~~~~~~~~Rfl~G~~~~~~~~~ 191 (521)
T KOG0255|consen 124 QSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAP------------NYWMFLIFRFLSGFFGSGPLTV 191 (521)
T ss_pred HHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhC------------cHHHHHHHHHHHHhhccchhHH
Confidence 3334444678999999999999999999988777766664443321 0223333444556666677778
Q ss_pred cceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCC
Q 021808 205 PWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQ 275 (307)
Q Consensus 205 ~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~ 275 (307)
.+.+.+|+++++.|+.+..+ ....+.++............ ++.+.+++.....++..++ +++.||++
T Consensus 192 ~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~ 258 (521)
T KOG0255|consen 192 GFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESP 258 (521)
T ss_pred hHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcCh
Confidence 88899999999999888777 55555555444332222222 2333333433433333332 44555874
No 119
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.85 E-value=5.9e-08 Score=83.96 Aligned_cols=186 Identities=19% Similarity=0.304 Sum_probs=104.1
Q ss_pred hhhhhcchhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHH-HcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCch
Q 021808 71 YLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRK 149 (307)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR 149 (307)
...++++++.|...+.- ...+.++.....++|.+++ +.+.+..+... ........+.+.=+++|+++||+|.|
T Consensus 211 ~~~v~~~~~~W~lsllY-----~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~-~a~~f~~~g~l~Rp~GG~LsDR~Gg~ 284 (417)
T COG2223 211 LKAVFSNKDTWLLSLLY-----FATFGGFVGFSAYLPMYLVTQFGLSPVTAGL-IAFLFPLIGALARPLGGWLSDRIGGR 284 (417)
T ss_pred HHHHhcCcchHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCChhhHHH-HHHHHHHHHHHHHhccchhhhhccch
Confidence 44566666666543332 2223444556677787766 55665544333 33333334556668999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHH
Q 021808 150 KLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVN 229 (307)
Q Consensus 150 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~ 229 (307)
+.++....+++++............. .......+........+...| +...+-+++-+||.+..+ ..|+....+
T Consensus 285 rv~~~~f~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~l~l~~~~G~G-nGsvfk~Ip~if~~~~G~-v~G~vga~G 358 (417)
T COG2223 285 RVTLAVFVGMALAAALLSLFLTGFGH----GGSFVVFVAVFLALFVFAGLG-NGSVFKMIPVIFPKETGA-VTGIVGAIG 358 (417)
T ss_pred hHHHHHHHHHHHHHHHHHcccccccc----CcchHHHHHHHHHHHHHhccC-cchheeechHHHHhhhhH-HHHHHHHhc
Confidence 99887777776666655433221110 011122222222222333444 345568889999987554 677777777
Q ss_pred HHHHHHHHHhhHHHHHHhC-CchhHHHHHHHHHHHHHHHH
Q 021808 230 WISNLIVAQTFLTVAELVG-TGATFLILAGIAVLAVVFVI 268 (307)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 268 (307)
.+|++..+..+....+..+ ....|.++..+..++.+..+
T Consensus 359 ~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~ 398 (417)
T COG2223 359 GLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTW 398 (417)
T ss_pred cccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 7776655555555555555 22345555555555555443
No 120
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.83 E-value=4.9e-07 Score=83.06 Aligned_cols=149 Identities=17% Similarity=0.122 Sum_probs=80.9
Q ss_pred CchhhHHhhHHHH-HHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCchHHHHHhHHHHHHHHHHHHHHHhhcCC
Q 021808 98 GINTVMYYSPTIV-QMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH-FGRKKLALSSLAGVIISLVLLSWAFISGSS 175 (307)
Q Consensus 98 ~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr-~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~ 175 (307)
+++.+..+.+.++ +..|.+..+....... .........+++|+++|| +|||+.++.+..+.++....+... . .
T Consensus 36 ~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~-~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~--~--~ 110 (500)
T PRK09584 36 GYYGLQGIMAVYLVKQLGMSEADSITLFSS-FSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWS--G--H 110 (500)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh--c--c
Confidence 4455556666666 5567655443333222 222233445689999999 599999888776666554433221 0 0
Q ss_pred CCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCccc--chhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhH
Q 021808 176 ASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQY--RGICGGMSATVNWISNLIVAQTFLTVAELVGTGATF 253 (307)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~--R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (307)
. ......+..+. +.......+....+.+|+||.+. |..+.++.+...++|+.+++.....+.+..++...|
T Consensus 111 -~-----~~~l~~~~~l~-gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F 183 (500)
T PRK09584 111 -D-----AGIVYMGMATI-AVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAF 183 (500)
T ss_pred -c-----HHHHHHHHHHH-HHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHH
Confidence 0 01112222222 12222233444567899998653 334556656666777776666555555555655555
Q ss_pred HHHHH
Q 021808 254 LILAG 258 (307)
Q Consensus 254 ~~~~~ 258 (307)
.+.+.
T Consensus 184 ~i~~i 188 (500)
T PRK09584 184 ALSVV 188 (500)
T ss_pred HHHHH
Confidence 55443
No 121
>PRK10504 putative transporter; Provisional
Probab=98.82 E-value=1.7e-07 Score=85.50 Aligned_cols=154 Identities=13% Similarity=0.167 Sum_probs=82.1
Q ss_pred hhhcchhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHH
Q 021808 73 DVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKL 151 (307)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~ 151 (307)
++++++.++..+...+. ...+.....++.|++++. .|.+.... ........+...++.++.+++.||+|||++
T Consensus 256 ~l~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~g~~~~~~-g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~ 329 (471)
T PRK10504 256 KLFRTRTFSLGLAGSFA-----GRIGSGMLPFMTPVFLQIGLGFSPFHA-GLMMIPMVLGSMGMKRIVVQVVNRFGYRRV 329 (471)
T ss_pred HHhcccchHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHcCchHH
Confidence 56777766543332211 112233444567777764 56654433 333444444456666889999999999999
Q ss_pred HHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHH
Q 021808 152 ALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWI 231 (307)
Q Consensus 152 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~ 231 (307)
+..+....++....+... .. . . .. +.......+........ .+....+..+.+|.+.|+.+.|+......+
T Consensus 330 ~~~~~~~~~~~~~~~~~~--~~-~-~---~~-~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 400 (471)
T PRK10504 330 LVATTLGLALVSLLFMLV--AL-L-G---WY-YLLPFVLFLQGMVNSTR-FSSMNTLTLKDLPDNLASSGNSLLSMIMQL 400 (471)
T ss_pred HHHHHHHHHHHHHHHHhc--cc-c-c---cH-HHHHHHHHHHHHHHHHH-HHHHHHHHHHcCCHHhccchHHHHHHHHHH
Confidence 877666555544433221 10 0 0 01 11111111111111111 122335667889999999999888777666
Q ss_pred HHHHHHHhhH
Q 021808 232 SNLIVAQTFL 241 (307)
Q Consensus 232 ~~~~~~~~~~ 241 (307)
+..+++....
T Consensus 401 g~~ig~~i~g 410 (471)
T PRK10504 401 SMSIGVTIAG 410 (471)
T ss_pred HHHHHHHHHH
Confidence 6655544433
No 122
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.81 E-value=3.3e-08 Score=84.29 Aligned_cols=138 Identities=24% Similarity=0.258 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCccc
Q 021808 124 LSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGP 203 (307)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (307)
.....++.++++++..|.++||+|||++++.+....++.....+... ++..++..-...+.+ .|.-+
T Consensus 73 lGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~------------~F~afv~aR~l~Gi~-kgnl~ 139 (451)
T KOG2615|consen 73 LGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSR------------NFAAFVLARFLGGIF-KGNLS 139 (451)
T ss_pred HhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHhhhhc-cCchH
Confidence 33344556889999999999999999999988877777655443221 111222212222332 34444
Q ss_pred ccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHH---HhCCchhHH--HHHH-HHHHHHHHHHhhccCC
Q 021808 204 VPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAE---LVGTGATFL--ILAG-IAVLAVVFVILFVPET 274 (307)
Q Consensus 204 ~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~-~~~~~~~~~~~~lpet 274 (307)
+.-++++|+++.+.|+.+.+.....-.+|.++++.+-..+.. ..+..+.+. ++.. .+.....+..+++|||
T Consensus 140 v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpET 216 (451)
T KOG2615|consen 140 VIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPET 216 (451)
T ss_pred HHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 566899999999999877655444433444444333222221 222221111 1222 2222244556789998
No 123
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.81 E-value=1.8e-08 Score=91.12 Aligned_cols=81 Identities=23% Similarity=0.251 Sum_probs=53.8
Q ss_pred ccchhhhhcchhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcc-
Q 021808 68 TVRYLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH- 145 (307)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr- 145 (307)
+..+.+.++.+..+...+. .++.....+...+|+|.++.+ .+.+ ...+...++...+.++++.+++|+++||
T Consensus 263 ~~~~~~a~~dp~vw~~~l~-----~~~~~lv~~~~~~~lpl~l~~~~~~s-~~~a~~ls~~~~~~g~v~~i~ag~lsdr~ 336 (495)
T KOG2533|consen 263 WKGFKEALKDPGVWPFSLC-----YFFLKLVNYGFSYWLPLYLKSNGGYS-ELQANLLSTPYDVGGIVGLILAGYLSDRL 336 (495)
T ss_pred HHHHHHHHhchhHHHHHHH-----HHHHhhccccHHHHHHHHHHcCCCcC-hHHhccccchHHhhhHHHHHHHHHHHHHH
Confidence 3456777777766544333 222333455677889998887 3344 3445667788888899999999999999
Q ss_pred ---cCchHHHHH
Q 021808 146 ---FGRKKLALS 154 (307)
Q Consensus 146 ---~GrR~~l~~ 154 (307)
..+|.....
T Consensus 337 ~~~~~~~~~~~~ 348 (495)
T KOG2533|consen 337 KTIFARRLLFIV 348 (495)
T ss_pred hhhHHHHHHHHH
Confidence 455554443
No 124
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.80 E-value=1.5e-07 Score=83.92 Aligned_cols=164 Identities=24% Similarity=0.181 Sum_probs=89.2
Q ss_pred hHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCc
Q 021808 102 VMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGV 181 (307)
Q Consensus 102 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (307)
...+.+.++.+.+.... ... ........+++.++.+++.||+|||+.+..+....++....+... . +
T Consensus 235 ~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~---~-~------ 301 (399)
T PRK05122 235 IATFITLYYAARGWDGA--ALA-LTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLA---P-S------ 301 (399)
T ss_pred HHHHHHHHHHHcccccc--hHH-HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh---c-c------
Confidence 33455655555555321 222 223334467788899999999999998776655444443332211 1 0
Q ss_pred hhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHH
Q 021808 182 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAV 261 (307)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (307)
.+..+....+...... ...+.......|.+|++.|+++.|+......++..+++.......+..+....+.+.+++.+
T Consensus 302 -~~~~~~~~~l~G~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 379 (399)
T PRK05122 302 -PWMALIGAALTGFGFS-LVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAAL 379 (399)
T ss_pred -HHHHHHHHHHHHHhHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 0111222222211111 12223234556889999999999988777777766655544444444454445555555555
Q ss_pred HHHHHHHhhccCCCCCCHHH
Q 021808 262 LAVVFVILFVPETQGLTFLE 281 (307)
Q Consensus 262 ~~~~~~~~~lpet~~~~l~e 281 (307)
++.+. .+++++.++++.+|
T Consensus 380 ~~~~~-~~~~~~~~~~~~~~ 398 (399)
T PRK05122 380 LGLAL-TWLLYRRAPRAVPE 398 (399)
T ss_pred HHHHH-HHHhcccccccCCC
Confidence 44443 34566666665543
No 125
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.79 E-value=5e-07 Score=80.51 Aligned_cols=156 Identities=13% Similarity=0.169 Sum_probs=81.1
Q ss_pred HhhHHHHH-HcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCch
Q 021808 104 YYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVY 182 (307)
Q Consensus 104 ~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (307)
.+.|.+++ ..+.++........ ...+..+++.++.|+++||+|||+.+..+....++..... .. .. . .
T Consensus 237 ~~~p~~l~~~~~~~~~~~g~~~~-~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~--~~-~~-~------~ 305 (393)
T PRK15011 237 INMPLFIINELHLPEKLAGVMMG-TAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGM--LM-AH-S------P 305 (393)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH--HH-Hh-h------H
Confidence 45666654 45665554443333 3334467788999999999999997765544333322211 11 11 1 0
Q ss_pred hHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHH
Q 021808 183 GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVL 262 (307)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (307)
+..+....+....... ..+....+..|.+|.+ |+++.++......++..+++.....+.+..+....+.+...+.++
T Consensus 306 -~~~l~~~~l~~~~~g~-~~~~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~ 382 (393)
T PRK15011 306 -AILLGLQLLNAIYIGI-LGGIGMLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIA 382 (393)
T ss_pred -HHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 1111111111111111 0112234568999976 888888877766777776665555555544443344444444444
Q ss_pred HHHHHHhhccCC
Q 021808 263 AVVFVILFVPET 274 (307)
Q Consensus 263 ~~~~~~~~lpet 274 (307)
+. +..+..||+
T Consensus 383 ~~-~~~~~~~~~ 393 (393)
T PRK15011 383 TL-FCLLRIKDV 393 (393)
T ss_pred HH-HHHHhhcCC
Confidence 33 344555654
No 126
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.79 E-value=1.9e-07 Score=83.28 Aligned_cols=128 Identities=13% Similarity=0.072 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccce
Q 021808 128 VAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWT 207 (307)
Q Consensus 128 ~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (307)
..+...++.+..+++.||+|||+.+..+....++....... . .+ . +.......+.... ..........
T Consensus 263 ~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~---~-~~--~-----~~~~~~~~l~g~~-~~~~~~~~~~ 330 (396)
T TIGR00882 263 GELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSF---A-TT--A-----LEVVILKMLHAFE-VPFLLVGCFK 330 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh---c-CC--h-----HHHHHHHHHHHHH-HHHHHHHHHH
Confidence 33445677788899999999999887665544443332211 1 11 0 1111111111111 1111122234
Q ss_pred eecccCCcccchhhhhH-HHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHHHHHH
Q 021808 208 LNSEVYPEQYRGICGGM-SATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFV 267 (307)
Q Consensus 208 ~~~ElfPt~~R~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (307)
+..+.+|++.|++..+. ......+++.+++.....+.+..+....+.+.+.+..+..++.
T Consensus 331 ~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 331 YITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 66788999999876665 3344556666665555555555555455666666555555443
No 127
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.79 E-value=2e-07 Score=81.84 Aligned_cols=160 Identities=18% Similarity=0.165 Sum_probs=86.5
Q ss_pred HhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhccc-----CchHHHH-HhHHHHHHHHHHHHHHHhhcCCCC
Q 021808 104 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHF-----GRKKLAL-SSLAGVIISLVLLSWAFISGSSAS 177 (307)
Q Consensus 104 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~-----GrR~~l~-~~~~~~~~~~~~~~~~~~~~~~~~ 177 (307)
.-.|.+.++.|.+..+..... ... .... ..++.|.++||+ |||+.++ .+....+++...+.+ .. +.
T Consensus 9 ~~~~~~~~~~g~s~~~~g~~~-~~~-~~~~-~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~--~~---~~ 80 (356)
T TIGR00901 9 NTLPYWLRSKNVSLKTIGFFS-LVG-LPYS-LKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSF--LV---PS 80 (356)
T ss_pred hHHHHHHHHcCCCHHHHHHHH-HHH-HHHH-HHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHc--CC---cc
Confidence 456778888888776654442 222 2222 378999999998 8998754 444444333333221 11 00
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhC--------C
Q 021808 178 SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG--------T 249 (307)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~ 249 (307)
.. . + .+....+..........+...++.+|.+|++.|+.+.|+......+|.++++.....+....+ +
T Consensus 81 -~~-l-~-~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~w 156 (356)
T TIGR00901 81 -TD-L-P-LLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLW 156 (356)
T ss_pred -hh-H-H-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccc
Confidence 01 1 1 111111111222222234445678999999999999888776666776666554444433334 4
Q ss_pred chhHHHHHHHHHHHHHHHHhhccCCC
Q 021808 250 GATFLILAGIAVLAVVFVILFVPETQ 275 (307)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~lpet~ 275 (307)
...+.+.+...++..+...+..||.+
T Consensus 157 r~~f~i~ai~~l~~~~~~~~~~~e~~ 182 (356)
T TIGR00901 157 GYIFFWTALLILPGLLVTLFLAKEPQ 182 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 34555555544444443334457754
No 128
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.77 E-value=4.4e-07 Score=80.19 Aligned_cols=117 Identities=15% Similarity=0.214 Sum_probs=60.6
Q ss_pred HhhHHHH-HHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCch
Q 021808 104 YYSPTIV-QMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVY 182 (307)
Q Consensus 104 ~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (307)
.+.|.++ +..|.+..+... ......+..+++.++.+++.||+|||+.+..+.....+..+......... . .
T Consensus 215 ~~~~~~~~~~~g~s~~~~g~-~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~-- 286 (377)
T PRK11102 215 TAGPFVYIELNGVSPQNFGY-YFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLD-L----G-- 286 (377)
T ss_pred HcCHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHh-h----h--
Confidence 3445444 445665544333 34445555778899999999999999988766554333322221111110 0 0
Q ss_pred hHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHH
Q 021808 183 GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNW 230 (307)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~ 230 (307)
.+....+..++..... ...+....+..|..| +.|+++.++......
T Consensus 287 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~ 332 (377)
T PRK11102 287 FWALVVGVAAFVGCVS-MISSNAMAVILDEFP-HMAGTASSLAGTLRF 332 (377)
T ss_pred HHHHHHHHHHHHHHHH-HhhHHHHHHHhcccc-ccchHHHHHHHHHHH
Confidence 1111222222222211 112222345567777 778888877655443
No 129
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.77 E-value=4.4e-07 Score=81.06 Aligned_cols=165 Identities=18% Similarity=0.337 Sum_probs=94.2
Q ss_pred CchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhccc-----CchH-HHHHhHHHHHHHHHHHHHHHh
Q 021808 98 GINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHF-----GRKK-LALSSLAGVIISLVLLSWAFI 171 (307)
Q Consensus 98 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~-----GrR~-~l~~~~~~~~~~~~~~~~~~~ 171 (307)
.+.....-+|.++++.|.+..+......+.. . .+..++.|.++||+ |||+ .+..+....+++...+...
T Consensus 14 ~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~-~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~-- 88 (402)
T PRK11902 14 PLALTSGTLQAWMTVEGLDIQTIGFFSLVGQ-A--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFC-- 88 (402)
T ss_pred hHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH-H--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhc--
Confidence 3444455678899999998776654433222 2 46778999999999 8876 4555555555444433221
Q ss_pred hcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHH-hCCc
Q 021808 172 SGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAEL-VGTG 250 (307)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 250 (307)
.. . ... +. +.....+.........+...++.+|.+|.+.|+++.++......++.++++.....+... .++.
T Consensus 89 ~~-~---~~~--~~-l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~ 161 (402)
T PRK11902 89 PP-H---AAL--WP-LAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWG 161 (402)
T ss_pred Cc-c---chH--HH-HHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHH
Confidence 11 0 011 11 111111122233334455567889999999999988887766666666665544444332 2444
Q ss_pred hhHHHHHHHHHHHHHHHHhhccCCC
Q 021808 251 ATFLILAGIAVLAVVFVILFVPETQ 275 (307)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~lpet~ 275 (307)
..+.+.+.+.++..+ ..++.||++
T Consensus 162 ~~f~i~a~~~l~~~l-~~~~~~e~~ 185 (402)
T PRK11902 162 NTYLLMAGLMLAGAL-TTLWAPEPE 185 (402)
T ss_pred HHHHHHHHHHHHHHH-HHHhcCCCc
Confidence 455555554444333 345667764
No 130
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.77 E-value=3.9e-07 Score=81.07 Aligned_cols=152 Identities=17% Similarity=0.007 Sum_probs=78.8
Q ss_pred hhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhH
Q 021808 105 YSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGW 184 (307)
Q Consensus 105 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (307)
+.+.++++.|.+.+..............+++.++++++.||+|+|+.+..+....++..+... ........ .. ..
T Consensus 230 ~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~-~~~~~~~~--~~--~~ 304 (390)
T TIGR02718 230 LSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWF-AQAAFWLA--PG--IA 304 (390)
T ss_pred HhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH-HHHHcccC--Cc--HH
Confidence 445555667887665544434333334566788999999999999988765544422222221 11111000 00 01
Q ss_pred HHHHHHHHHHHHHhcCcccccceeecccCCc-ccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHH
Q 021808 185 IAVIGLALYIAFFAPGMGPVPWTLNSEVYPE-QYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVL 262 (307)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt-~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (307)
.......+....... ..+..+.+..+..++ +.|++..++.++...++..+++.......+..+....+...+.+.++
T Consensus 305 ~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~ 382 (390)
T TIGR02718 305 VAWSCSAFGSLITGI-TSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVL 382 (390)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 111111111111111 112223344455555 88999999988888888877776655555555543444444433333
No 131
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.76 E-value=2.3e-07 Score=84.85 Aligned_cols=157 Identities=16% Similarity=0.132 Sum_probs=85.3
Q ss_pred hhhhcchhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchH
Q 021808 72 LDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKK 150 (307)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~ 150 (307)
.+++++++.+...+..... ....+...++.|.++++ .|.+..+ +........+..+++.++++++.||+|||+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~p~~~~~~~g~s~~~-~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~ 322 (485)
T TIGR00711 249 LRLFKYRNFTIGCVYMSLL-----GLGLYGSFYLLPLYLQQVLGYTALQ-AGLHILPVGLAPMLSSPIAGRMGDKIDPRK 322 (485)
T ss_pred HHHHcCCChHHHHHHHHHH-----HHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCcHH
Confidence 3566766655443322211 12233445667777765 4665444 334455555667889999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHH
Q 021808 151 LALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNW 230 (307)
Q Consensus 151 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~ 230 (307)
++..+....++....+.+.. .. ... . +.......+..........+. .....|..|++.|+++.|+......
T Consensus 323 ~~~~g~~~~~~~~~~~~~~~---~~-~~~--~-~~~~~~~~l~g~g~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~ 394 (485)
T TIGR00711 323 LVTIGLILYAVGFYWRAFTF---TP-DTP--F-LAIALPQFIRGFGMGCFFMPL-TTIALSGLPPHKIARGSSLSNFTRQ 394 (485)
T ss_pred HHHHHHHHHHHHHHHHhccC---CC-CCC--H-HHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCHHHHhHHHHHHHHHHH
Confidence 88766555544443322111 11 100 1 111111111111111111122 2344577899999999999888877
Q ss_pred HHHHHHHHhhHH
Q 021808 231 ISNLIVAQTFLT 242 (307)
Q Consensus 231 ~~~~~~~~~~~~ 242 (307)
++..++......
T Consensus 395 ~g~~ig~~i~g~ 406 (485)
T TIGR00711 395 LGGSIGTALITT 406 (485)
T ss_pred HHHHHHHHHHHH
Confidence 777666544433
No 132
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.76 E-value=1.2e-06 Score=78.44 Aligned_cols=127 Identities=19% Similarity=0.210 Sum_probs=64.2
Q ss_pred hhHHHH-HHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchh
Q 021808 105 YSPTIV-QMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 183 (307)
Q Consensus 105 ~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (307)
+.|.++ +..+.+..+.... .....+..+++.++.++++||+|||+.+..+....++....+....... .. . ..
T Consensus 237 ~~p~~~~~~~g~~~~~~g~~-~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~---~-~~ 310 (406)
T PRK15402 237 LSPVILISGEQLSSYEYGLL-QVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVIS-SH---A-YL 310 (406)
T ss_pred HhHHHHHHHhCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcc-cc---c-HH
Confidence 445554 3456654433332 2333344678889999999999999988766555444444333221111 10 0 11
Q ss_pred HHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhh
Q 021808 184 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTF 240 (307)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~ 240 (307)
+ ...+..++....... .+......... +.+.|++..++......++..+++...
T Consensus 311 ~-~~~~~~~~g~g~~~~-~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~ 364 (406)
T PRK15402 311 W-LTAGLSLYAFGIGLA-NAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELS 364 (406)
T ss_pred H-HHHHHHHHHHHHHHH-hhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 1 122222222221111 11211222222 337788888888777777766655443
No 133
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.75 E-value=9.8e-07 Score=76.55 Aligned_cols=153 Identities=22% Similarity=0.190 Sum_probs=94.5
Q ss_pred HHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHH
Q 021808 107 PTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIA 186 (307)
Q Consensus 107 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (307)
+.+.+..+.+..+..+...+.... +.+.=+.-|++.||+|.|+....+.+..++-++.+.+.....+ +..+.
T Consensus 38 ~~i~~~~~LS~~q~~ll~aiPil~-GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~-------~~~ll 109 (417)
T COG2223 38 VFIKSDFGLSEGQKGLLVAIPILV-GALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPS-------TWQLL 109 (417)
T ss_pred hhhccccCCCHHHHHHHHHHHHHH-hHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCc-------hHHHH
Confidence 445567788777766555555443 5666678899999999999987766555444444333322211 11222
Q ss_pred HHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhC---CchhHHHHHHHHHHH
Q 021808 187 VIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG---TGATFLILAGIAVLA 263 (307)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 263 (307)
..++.+ ....+..++...+.++.||++.++++.|+.. .+++|..+.....|.+....+ +.....++....++.
T Consensus 110 ~~gll~---G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~ 185 (417)
T COG2223 110 VIGLLL---GLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIA 185 (417)
T ss_pred HHHHHH---hcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 222222 2223334455578899999999999999988 888888777776666665555 344445555555555
Q ss_pred HHHHHhhc
Q 021808 264 VVFVILFV 271 (307)
Q Consensus 264 ~~~~~~~l 271 (307)
.+..++..
T Consensus 186 ~v~~~~~~ 193 (417)
T COG2223 186 AVLAWLGM 193 (417)
T ss_pred HHHHHHHh
Confidence 55444443
No 134
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.75 E-value=9.4e-07 Score=78.62 Aligned_cols=61 Identities=20% Similarity=0.319 Sum_probs=39.4
Q ss_pred hhHHHH-HHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHH
Q 021808 105 YSPTIV-QMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLL 166 (307)
Q Consensus 105 ~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~ 166 (307)
+.|.+. +..|.+...... .........+++.++.+++.||+|||+.+..+.....+..+.+
T Consensus 225 ~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~ 286 (392)
T PRK10473 225 TSPVLLMEQMGFSRGEYAI-IMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITL 286 (392)
T ss_pred hCHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 345444 455765544333 3344455577888999999999999998877665554444433
No 135
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.74 E-value=5.8e-07 Score=82.43 Aligned_cols=163 Identities=16% Similarity=0.243 Sum_probs=91.0
Q ss_pred hhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhccc-----CchHHH-HHhHHHHHHHHHHHHHHHhhc
Q 021808 100 NTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHF-----GRKKLA-LSSLAGVIISLVLLSWAFISG 173 (307)
Q Consensus 100 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~-----GrR~~l-~~~~~~~~~~~~~~~~~~~~~ 173 (307)
.......|.+++..|.+..+.... +.... ..++.++.+.++||+ |||+.. ..+.+..+++...+... .
T Consensus 29 ~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~--~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~--~- 102 (491)
T PRK11010 29 ALTSGTLQAWMTVENIDLKTIGFF-SLVGQ--AYVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFL--E- 102 (491)
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHH-HHHHH--HHHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHc--C-
Confidence 344445677778777765544332 21221 235778999999999 999864 44444444443333221 1
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHH-HhCCchh
Q 021808 174 SSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAE-LVGTGAT 252 (307)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 252 (307)
. . ....++ ..... ..........+...++.+|.+|.+.|+++.++......++..+++.....+.. ..++...
T Consensus 103 -~-~--~~l~~l-~~~~~-l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~ 176 (491)
T PRK11010 103 -P-G--TQLRWL-AALAV-VIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGM 176 (491)
T ss_pred -C-c--chHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHH
Confidence 0 0 001111 11111 12222223344556788999999999999998888777787776655444444 2344455
Q ss_pred HHHHHHHHHHHHHHHHhhccCCC
Q 021808 253 FLILAGIAVLAVVFVILFVPETQ 275 (307)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~lpet~ 275 (307)
|.+.+.+.++..+. .++.||+.
T Consensus 177 f~i~a~l~ll~~l~-~~~~~e~~ 198 (491)
T PRK11010 177 YWLMAALLIPCIIA-TLLAPEPT 198 (491)
T ss_pred HHHHHHHHHHHHHH-HHhcCCCc
Confidence 66655555444333 34568764
No 136
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.73 E-value=1e-06 Score=78.20 Aligned_cols=145 Identities=13% Similarity=0.106 Sum_probs=80.4
Q ss_pred HHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCch
Q 021808 103 MYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVY 182 (307)
Q Consensus 103 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (307)
..+.|.+.++.|.+......... ...+..+++.++.++++||+|||+.+..+....+++.+.+. . ..
T Consensus 220 ~~~lp~~~~~~g~s~~~~g~~~~-~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~----~-~~------- 286 (381)
T PRK03633 220 YGLMPLYLNHQGMSDASIGFWMA-LLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML----S-QA------- 286 (381)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHH-HHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh----h-hH-------
Confidence 34678787777776554444433 34445678889999999999999988766555444433221 0 00
Q ss_pred hHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHH
Q 021808 183 GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVL 262 (307)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (307)
. ......++.. ...+..+....+..|..|.+.++...+.......+|..+++.....+.+..+....+.+.+.+.++
T Consensus 287 -~-~~~~~~l~g~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~ 363 (381)
T PRK03633 287 -A-MAPALFILGA-AGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFI 363 (381)
T ss_pred -H-HHHHHHHHHH-HHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHH
Confidence 0 0011111111 111223444566679888877665555544444566666655555555555554455555544443
Q ss_pred H
Q 021808 263 A 263 (307)
Q Consensus 263 ~ 263 (307)
.
T Consensus 364 ~ 364 (381)
T PRK03633 364 Y 364 (381)
T ss_pred H
Confidence 3
No 137
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.71 E-value=1.8e-06 Score=76.82 Aligned_cols=193 Identities=15% Similarity=0.120 Sum_probs=98.3
Q ss_pred hhhhhcchhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchH
Q 021808 71 YLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKK 150 (307)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~ 150 (307)
..+++|+|+....++..... .........|.+.++++.|..+.+..........+..++.-.+.+++..|+|-|+
T Consensus 200 ~~~llk~~~~~~Fll~~~l~-----~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ 274 (400)
T PF03825_consen 200 ALKLLKNPRFLVFLLAAFLI-----GISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKW 274 (400)
T ss_pred HHHHhcCccHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 34678877765433332211 1122333456677788888423222222223334456677778899999999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHH-
Q 021808 151 LALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVN- 229 (307)
Q Consensus 151 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~- 229 (307)
+++++....++=...+... ..+.+ ....+.+.+..+....+... ......|..+..|.+.|+++.|+.....
T Consensus 275 ll~~a~~~~~vR~~l~a~~----~~~~~--~~~~~~~l~q~lhG~tf~~~-~~a~~~yi~~~~p~~~~at~Q~l~~~~~~ 347 (400)
T PF03825_consen 275 LLLLALVAYAVRWLLYAYF----SDPWP--FIVALQLLGQLLHGLTFGLF-HAASVRYIDRIAPPELRATAQGLYSALSF 347 (400)
T ss_pred HHHHHHHHHHHHHHHHHHh----cCCcH--HHHHHHHHHHhhhhHHHHHH-HHHHHHHHHHhCCccchHHHHHHHHHHHh
Confidence 9887776655554443321 01100 00000111011111111111 1223368899999999999999876653
Q ss_pred HHHHHHHHHhhHHHHHHhCCch------hHHHHHHHHHHHHHHHHhhccCCC
Q 021808 230 WISNLIVAQTFLTVAELVGTGA------TFLILAGIAVLAVVFVILFVPETQ 275 (307)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~lpet~ 275 (307)
.+|..+++.....+.+..+... .+.+.+++.++..++.+++.+|+.
T Consensus 348 Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~~ 399 (400)
T PF03825_consen 348 GLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPKH 399 (400)
T ss_pred hHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 3455555444444444444222 223344444444444445556654
No 138
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.71 E-value=7.8e-07 Score=78.67 Aligned_cols=103 Identities=23% Similarity=0.138 Sum_probs=60.6
Q ss_pred HHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeeccc
Q 021808 133 AVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEV 212 (307)
Q Consensus 133 ~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El 212 (307)
.++.++.|+++||+|||+++..+....++..+...... +............+++. ...+.......+....+.+|.
T Consensus 49 ~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~r-~l~G~~~~~~~~~~~~~~~~~ 124 (394)
T TIGR00883 49 PLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLP---SYATIGIWAPILLLLAR-LIQGFSLGGEWGGAALYLAEY 124 (394)
T ss_pred hhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCC---ChhhhHHHHHHHHHHHH-HHHHhhccccccccHHHhhhc
Confidence 45788999999999999999887766666554443211 00000000001112221 222222223344455788999
Q ss_pred CCcccchhhhhHHHHHHHHHHHHHHHh
Q 021808 213 YPEQYRGICGGMSATVNWISNLIVAQT 239 (307)
Q Consensus 213 fPt~~R~~~~g~~~~~~~~~~~~~~~~ 239 (307)
+|.+.|+...++......+|..+++..
T Consensus 125 ~~~~~r~~~~~~~~~~~~~G~~i~~~~ 151 (394)
T TIGR00883 125 APPGKRGFYGSFQQVGAPVGLLLAALT 151 (394)
T ss_pred CCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 999999988888777666666665543
No 139
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.70 E-value=9.7e-07 Score=78.30 Aligned_cols=130 Identities=13% Similarity=0.048 Sum_probs=77.2
Q ss_pred CchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCC
Q 021808 98 GINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSAS 177 (307)
Q Consensus 98 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (307)
+......+.|.+.++.|.+..+.....+ .......++.++.|+++||+|||+.+..+....++........ . +
T Consensus 21 ~~~~~~~~lp~~~~~~~~s~~~~G~~~s-~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~---~-~-- 93 (381)
T PRK03633 21 AIAVLNTLVPLWLAQEHLPTWQVGVVSS-SYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLM---V-G-- 93 (381)
T ss_pred hhhhHHHHHHHHHHHcCCCHHHHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---c-c--
Confidence 3344556778888888886655544444 4445578889999999999999999887766655554433221 1 1
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhh
Q 021808 178 SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTF 240 (307)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~ 240 (307)
+ +..+++..+ .+.......+.......+..|.+.|++..|.......++..+++...
T Consensus 94 ----~-~~l~~~~~l-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 150 (381)
T PRK03633 94 ----F-WSWLAWRFV-AGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLV 150 (381)
T ss_pred ----H-HHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 112222211 12111112222223445778888898888887776666666655443
No 140
>PRK11043 putative transporter; Provisional
Probab=98.70 E-value=1.3e-06 Score=77.95 Aligned_cols=129 Identities=14% Similarity=0.143 Sum_probs=68.4
Q ss_pred HHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCch
Q 021808 103 MYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVY 182 (307)
Q Consensus 103 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (307)
..+.|.+.+..|.+...... ..........++..+.+++.||+|||+.+.......+++.+.+......... ..
T Consensus 223 ~~~~p~~~~~~g~s~~~~g~-~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~- 296 (401)
T PRK11043 223 LTGSPFILEQMGYSPADIGL-SYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHP----SL- 296 (401)
T ss_pred HHHhHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccC----cH-
Confidence 34567777777776544333 3333344567788888999999999987655444444433322211111111 11
Q ss_pred hHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhh
Q 021808 183 GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTF 240 (307)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~ 240 (307)
+..+....+..... ....+.......|.+|. .|+++.|+....+..++..++...
T Consensus 297 -~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~~~~~~~~~~~ 351 (401)
T PRK11043 297 -VPLLIPFCVMAAAN-GAIYPIVVAQALRPFPQ-ATGKAAALQNTLQLGLCFLASLLV 351 (401)
T ss_pred -HHHHHHHHHHHHHH-HHHHHHHHHHHhhhCcc-cChHHHHHHHHHHHHHHHHHHHHH
Confidence 11122222211111 12233333445577775 699999998877766655554443
No 141
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.69 E-value=1.2e-06 Score=79.18 Aligned_cols=175 Identities=17% Similarity=0.122 Sum_probs=91.1
Q ss_pred chhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhc----ccCchHHHHHh-HHHHHHHHHHHHHHHhhc
Q 021808 99 INTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLID----HFGRKKLALSS-LAGVIISLVLLSWAFISG 173 (307)
Q Consensus 99 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~D----r~GrR~~l~~~-~~~~~~~~~~~~~~~~~~ 173 (307)
+.....+.+.+++..|.+.. ..........+.+++..++.|+++| |+|||+.++.+ ....+++...+.+.....
T Consensus 20 ~~l~~~~l~~yl~~lg~~~~-~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~ 98 (477)
T TIGR01301 20 WALQLSLLTPYVQELGIPHA-WASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIG 98 (477)
T ss_pred HHHHHHHHHHHHHHcCCCHH-HHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhh
Confidence 33444556667788888554 3445555666678899999999999 59999988754 444444433332211100
Q ss_pred ----C--CCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccch--hhhhHHHHHHHHHHHHHHHhhHHH--
Q 021808 174 ----S--SASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRG--ICGGMSATVNWISNLIVAQTFLTV-- 243 (307)
Q Consensus 174 ----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~--~~~g~~~~~~~~~~~~~~~~~~~~-- 243 (307)
. .........+..++++.+.-...+....+. -++.+|++|.+.|. .+.++......+|++++.......
T Consensus 99 ~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~-rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~ 177 (477)
T TIGR01301 99 HLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPC-RAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGL 177 (477)
T ss_pred hhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHH-HHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 0 000000001222333323222222222333 47889999998763 456655555556665543322111
Q ss_pred HHHh-------------CCchhHHHHHHHHHHHHHHHHhhccCCC
Q 021808 244 AELV-------------GTGATFLILAGIAVLAVVFVILFVPETQ 275 (307)
Q Consensus 244 ~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~lpet~ 275 (307)
.... +....|.+.+.+.+++.+...+..||..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 178 YKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 1110 1112344555555555555666778864
No 142
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.69 E-value=6.8e-07 Score=79.82 Aligned_cols=129 Identities=18% Similarity=0.103 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeec
Q 021808 131 TNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNS 210 (307)
Q Consensus 131 ~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (307)
..+++.++.++++||+|||+.+..+....++..+..... . . .+...+...+. +.......+....+..
T Consensus 270 ~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~---~-~-------~~~~~~~~~~~-g~~~~~~~~~~~~~~~ 337 (408)
T PRK09874 270 AALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFV---Q-T-------PLQLGILRFLL-GAADGALLPAVQTLLV 337 (408)
T ss_pred HHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHh---c-c-------HHHHHHHHHHH-HhhhHhhHHHHHHHHH
Confidence 355677788999999999998876655444433322211 1 0 01111111111 1111122233334556
Q ss_pred ccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Q 021808 211 EVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFV 271 (307)
Q Consensus 211 ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 271 (307)
+..|.+.|++..|+......++..+++.....+.+..+....+.+.+++.++..+...+..
T Consensus 338 ~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 338 YNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred HhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 7889999999988887777777777665554444444544556666666666555544433
No 143
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.68 E-value=2.1e-08 Score=87.60 Aligned_cols=156 Identities=17% Similarity=0.120 Sum_probs=99.4
Q ss_pred cCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHH
Q 021808 113 AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLAL 192 (307)
Q Consensus 113 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (307)
.+.+++.. -.++...++...+.++++||++||++|+.++..|..+-.++.+....... .|..+++-.+
T Consensus 63 fni~~s~~-Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~-----------Fwq~~l~R~~ 130 (493)
T KOG1330|consen 63 FNISDSEL-GLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNH-----------FWQVLLCRGF 130 (493)
T ss_pred cCCCchhc-cchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHH-----------HHHHHHHHHH
Confidence 34444443 34455556668899999999999999999998887777666665543311 1223333333
Q ss_pred HHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhC-CchhHHHHHHHHHHHHHHHHhhc
Q 021808 193 YIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG-TGATFLILAGIAVLAVVFVILFV 271 (307)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l 271 (307)
. +..-..+.++...++++.||...|++..++.+...-+|+.++-.....+....+ +.+.+...+.+.++..++..++.
T Consensus 131 v-GiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~ 209 (493)
T KOG1330|consen 131 V-GIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFV 209 (493)
T ss_pred h-ccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhc
Confidence 2 222345567778899999999999999988777665665544222222222223 44566666677777777777778
Q ss_pred cCCCCCCHHH
Q 021808 272 PETQGLTFLE 281 (307)
Q Consensus 272 pet~~~~l~e 281 (307)
+|..++.-||
T Consensus 210 ~eP~rga~~~ 219 (493)
T KOG1330|consen 210 REPERGARDE 219 (493)
T ss_pred cCcccccccc
Confidence 7776543343
No 144
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.68 E-value=1.2e-06 Score=78.68 Aligned_cols=59 Identities=17% Similarity=0.205 Sum_probs=40.3
Q ss_pred hhHHhhHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHH
Q 021808 101 TVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVI 160 (307)
Q Consensus 101 ~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~ 160 (307)
....+.+.++++ .|.+..+.....+ .......++.++.|+++||+|||+.++.+..+.+
T Consensus 28 ~~~~~~~~~l~~~~g~s~~~~g~~~s-~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~ 87 (420)
T PRK09528 28 SWFSFFPIWLHDINGLSGTDTGIIFS-ANSLFALLFQPLYGLISDKLGLKKHLLWIISGLL 87 (420)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHH
Confidence 334455555555 7877666554444 4445578899999999999999999876544433
No 145
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.67 E-value=5.7e-07 Score=78.90 Aligned_cols=131 Identities=17% Similarity=0.133 Sum_probs=75.8
Q ss_pred CchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCC
Q 021808 98 GINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSAS 177 (307)
Q Consensus 98 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (307)
++.......|.+.+..|.+..+..... ........++.++.|+++||+|||+.+..+....++..+.. .. . +
T Consensus 15 ~~~~~~~~lp~l~~~~~~s~~~~g~~~-s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~----~~--~-~ 86 (355)
T TIGR00896 15 ALTSVGPLLPQIRSALGMSFSVAGLLT-ALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR----SA--P-G 86 (355)
T ss_pred ccccCcccHHHHHHHhCCCHHHHHHHH-HHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH----Hh--c-c
Confidence 334445567888888888766655444 44445578899999999999999999887665544333221 11 1 1
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHH
Q 021808 178 SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTV 243 (307)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~ 243 (307)
. +..++...+...... ...+....+..|.+| +.|++..|+......++..+++.....+
T Consensus 87 ----~-~~l~~~~~~~g~g~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l 145 (355)
T TIGR00896 87 ----T-ALLFAGTALIGVGIA-IINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPL 145 (355)
T ss_pred ----H-HHHHHHHHHHHHHHH-HHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 111111111111111 112233346678887 4688888887776666666555443333
No 146
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.67 E-value=2.1e-06 Score=76.47 Aligned_cols=161 Identities=14% Similarity=0.126 Sum_probs=78.7
Q ss_pred HHhhHHH-HHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHH-HhHHHHHHHHHHHHHHHhhcCCCCCCC
Q 021808 103 MYYSPTI-VQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLAL-SSLAGVIISLVLLSWAFISGSSASSSG 180 (307)
Q Consensus 103 ~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (307)
..+.+.+ .++.|.+..+.....+.........+.+.+++ +||+|||+.++ .+.....+........ .+
T Consensus 35 ~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~----~~----- 104 (393)
T PRK15011 35 TPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWN----RN----- 104 (393)
T ss_pred HHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHh----hH-----
Confidence 3444544 45567766554443333333333445555666 99999998754 3333322222222111 00
Q ss_pred chhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchh--hhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHH
Q 021808 181 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGI--CGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAG 258 (307)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (307)
+..+.+.+.. .........+....+.++..|.+-|.. ..+.......++..+++.....+.+..++...|...+.
T Consensus 105 -~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~ 181 (393)
T PRK15011 105 -YFVLLFVGVF--LSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAV 181 (393)
T ss_pred -HHHHHHHHHH--HHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHH
Confidence 1111111111 112222334444456677666665532 23444445556666665555444445565556666665
Q ss_pred HHHHHHHHHHhhccCCCC
Q 021808 259 IAVLAVVFVILFVPETQG 276 (307)
Q Consensus 259 ~~~~~~~~~~~~lpet~~ 276 (307)
..++..+...+++||.+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~ 199 (393)
T PRK15011 182 AFIVCGVMVWLFLPSMRK 199 (393)
T ss_pred HHHHHHHHHHhhcCccCC
Confidence 555555555666787654
No 147
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.66 E-value=1.4e-06 Score=71.75 Aligned_cols=138 Identities=22% Similarity=0.200 Sum_probs=83.2
Q ss_pred CchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCC
Q 021808 98 GINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSAS 177 (307)
Q Consensus 98 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (307)
..|....|.|.+.+..+.++.+... ++....+...+ .+..|.+.|++|.|.++.++.....+....+.......-. .
T Consensus 17 t~Y~Fs~yS~~Lk~~l~~sq~~l~~-l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~-~ 93 (250)
T PF06813_consen 17 TTYTFSAYSPQLKSRLGYSQSQLNT-LSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIP-S 93 (250)
T ss_pred cccchhhhhHHHHHHhCCCHHHHHH-HHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccC-c
Confidence 4566778999999999998776543 34444443333 5788999999999999988887777777665443332211 1
Q ss_pred CCCchhHHHHHHHHHHHHHHhcC-cccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHH
Q 021808 178 SSGVYGWIAVIGLALYIAFFAPG-MGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVA 244 (307)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~ 244 (307)
. ..|.+. +..+....+.. .+.....-..+-||. .||++.|+.-++..+++.+.+.++....
T Consensus 94 ~---~~~~~~--~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 94 L---PVWLMC--LFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred c---chHHHH--HHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHc
Confidence 1 112221 11111211111 111222334588996 5999999988877776666555554433
No 148
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.65 E-value=7.2e-07 Score=82.32 Aligned_cols=139 Identities=22% Similarity=0.193 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcc
Q 021808 123 LLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMG 202 (307)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (307)
+........+.++.++.|.++|++|||+.++.+.+...+..+....... .....++-.+.. ....+..
T Consensus 93 ~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~-----------~~~l~~GR~l~G-~g~G~~~ 160 (513)
T KOG0254|consen 93 LLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPS-----------WYQLIVGRILTG-LGVGGAS 160 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhh-----------HHHHHHHHHHhc-cchhhhh
Confidence 3444445557899999999999999999998877766666665543320 122333333322 2222334
Q ss_pred cccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHh--CCchhHHHHHHHHHHHHHHHHhhccCCC
Q 021808 203 PVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELV--GTGATFLILAGIAVLAVVFVILFVPETQ 275 (307)
Q Consensus 203 ~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~lpet~ 275 (307)
.+...|.+|+-|++.|+...+.....-.+|..++ .......... ++...+.+....+++..+. .+++||+.
T Consensus 161 ~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp 233 (513)
T KOG0254|consen 161 VLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESP 233 (513)
T ss_pred hcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCCh
Confidence 4566899999999999987776665555444433 2221111111 2222333333334434333 67788873
No 149
>PRK12382 putative transporter; Provisional
Probab=98.64 E-value=1.3e-06 Score=77.79 Aligned_cols=153 Identities=24% Similarity=0.212 Sum_probs=89.7
Q ss_pred hhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCC
Q 021808 101 TVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 180 (307)
Q Consensus 101 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (307)
....+.+.++++.+.+.. .. .........+++.++.+++.||+|||+.+..+....++..+.+.. .. +
T Consensus 234 ~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~---~~---~--- 301 (392)
T PRK12382 234 VIGTFVSLYFASKGWAMA--GF-TLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWL---AP---T--- 301 (392)
T ss_pred HHHHHHHHHHHhcCCchh--HH-HHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHH---cc---c---
Confidence 344555666666555332 22 222333445778899999999999999887665555444433221 11 0
Q ss_pred chhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHH
Q 021808 181 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIA 260 (307)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (307)
.+....+..+...... ...+.......|.+|++.|+++.|+......++..+++.....+.+..+....+.+.+.+.
T Consensus 302 --~~~~~~~~~l~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~ 378 (392)
T PRK12382 302 --AWVALAGAALTGAGCS-LIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISA 378 (392)
T ss_pred --HHHHHHHHHHHHHHHH-hHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHH
Confidence 0112222222222111 1223334566789999999999999888888888777766666666666555666666666
Q ss_pred HHHHHHHH
Q 021808 261 VLAVVFVI 268 (307)
Q Consensus 261 ~~~~~~~~ 268 (307)
+++.+...
T Consensus 379 ~~~~~~~~ 386 (392)
T PRK12382 379 VLGIIVTI 386 (392)
T ss_pred HHHHHHHH
Confidence 55555443
No 150
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.63 E-value=1.1e-06 Score=76.39 Aligned_cols=166 Identities=19% Similarity=0.287 Sum_probs=104.4
Q ss_pred CchhhHHhhHHHHH-HcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCC
Q 021808 98 GINTVMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSA 176 (307)
Q Consensus 98 ~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~ 176 (307)
|.+........+.. ..|.++.+ -....+..++++++|++++|++.||+|-|+++..+.+...+.++... ... .+
T Consensus 267 Gv~til~~~~~fg~~~~gls~~~-lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~--~~~--~~ 341 (438)
T COG2270 267 GVNTILAMGGVFGAADLGLSSTE-LLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLI--FLE--GE 341 (438)
T ss_pred hHHHHHHHHHHHHHHHcCccHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHH--Hcc--cc
Confidence 44555455555555 56665544 46667777888999999999999999999988766554333322211 111 11
Q ss_pred CCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCC-chhHHH
Q 021808 177 SSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGT-GATFLI 255 (307)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 255 (307)
.......+..+.+..+..+..-.|.+++.|++.-+...|+....++.++++++.......+..+. ...+..
T Consensus 342 --------~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~ 413 (438)
T COG2270 342 --------LDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLS 413 (438)
T ss_pred --------HHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHH
Confidence 11222223334445566677788999999999988899999999999999988777666655553 222333
Q ss_pred HHHHHHHHHHHHHhhccCCCCC
Q 021808 256 LAGIAVLAVVFVILFVPETQGL 277 (307)
Q Consensus 256 ~~~~~~~~~~~~~~~lpet~~~ 277 (307)
+..+..++.+ ..+..|+.+.+
T Consensus 414 i~vll~iGl~-~L~~v~~~~~~ 434 (438)
T COG2270 414 IIVLLLIGLL-LLLRVKVPGRR 434 (438)
T ss_pred HHHHHHhhHh-hEEeecCCCCc
Confidence 3333333333 34555665443
No 151
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.63 E-value=1.9e-06 Score=79.09 Aligned_cols=129 Identities=16% Similarity=0.159 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccce
Q 021808 128 VAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWT 207 (307)
Q Consensus 128 ~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (307)
...-.++.++++|.++||++||++++.+-...++....+......... ..+. +..+.+..+.......|...+
T Consensus 54 ~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~------~~~~-Ll~~~fl~g~~~a~~~PA~~A 126 (524)
T PF05977_consen 54 STLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLL------SPWL-LLILTFLLGIGSAFFNPAWQA 126 (524)
T ss_pred HHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcC------CHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 333455678889999999999999988766655544444332222111 1122 222222223333333556668
Q ss_pred eecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHH
Q 021808 208 LNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 263 (307)
Q Consensus 208 ~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (307)
+.+|+.|.+....+.++.....++...+++..-..+....|....|.+-+...++.
T Consensus 127 ~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~ 182 (524)
T PF05977_consen 127 IIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLIS 182 (524)
T ss_pred HHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999988778887766666665555433333334444444454434333333
No 152
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.63 E-value=3.4e-07 Score=86.26 Aligned_cols=133 Identities=13% Similarity=0.039 Sum_probs=82.7
Q ss_pred hHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcC-----------
Q 021808 106 SPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGS----------- 174 (307)
Q Consensus 106 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~----------- 174 (307)
.+++-++.+.++.+.....+ ...+...++.++.+++.||.|||+.+.++.++.++..+++.+.-....
T Consensus 56 l~~iek~F~lss~~~G~i~s-~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~ 134 (633)
T TIGR00805 56 LTTIERRFKLSTSSSGLING-SYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSST 134 (633)
T ss_pred chhhhhhhCCCCCcceeeee-hhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccc
Confidence 45666777877666544433 344446788899999999999999998887777777666543310000
Q ss_pred ---C---------C--C-------------CCC-chhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHH
Q 021808 175 ---S---------A--S-------------SSG-VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSA 226 (307)
Q Consensus 175 ---~---------~--~-------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~ 226 (307)
. . . ... ...+..++..-++.+.......+....++.|.+|++.|+...|+..
T Consensus 135 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~ 214 (633)
T TIGR00805 135 GNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILE 214 (633)
T ss_pred ccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHH
Confidence 0 0 0 000 0012222222333344444555667789999999999999999887
Q ss_pred HHHHHHHHHHHHh
Q 021808 227 TVNWISNLIVAQT 239 (307)
Q Consensus 227 ~~~~~~~~~~~~~ 239 (307)
....+|..++...
T Consensus 215 ~~~~iG~~lG~ll 227 (633)
T TIGR00805 215 SIAVFGPAFGYLL 227 (633)
T ss_pred HHHHhhhHHHHHH
Confidence 7777666655433
No 153
>PRK10133 L-fucose transporter; Provisional
Probab=98.63 E-value=3.3e-06 Score=76.38 Aligned_cols=129 Identities=16% Similarity=0.061 Sum_probs=75.6
Q ss_pred hhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCC
Q 021808 100 NTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSS 179 (307)
Q Consensus 100 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (307)
.....+.|.+.+..+.++.+.... .........++.++.|.++||+|||+++..+....++..+........ . +
T Consensus 43 ~~~~~~~p~i~~~~~~s~~~~gl~-~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a--~-~-- 116 (438)
T PRK10133 43 NLNDILLPQFQQAFTLTNFQAGLI-QSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEI--M-N-- 116 (438)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc--C-C--
Confidence 445567788877888876555444 444555578899999999999999999988877776666543211111 1 0
Q ss_pred CchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHH
Q 021808 180 GVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQ 238 (307)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~ 238 (307)
+ ...+.+..+.....+ ...+....+..|..|.+.|....++.+....+|..+++.
T Consensus 117 --~-~~ll~~r~l~G~g~g-~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~ 171 (438)
T PRK10133 117 --Y-TLFLVGLFIIAAGLG-CLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVV 171 (438)
T ss_pred --H-HHHHHHHHHHHHHHH-HHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHH
Confidence 1 112222222211111 112222345568777777765667766666666655543
No 154
>PRK03699 putative transporter; Provisional
Probab=98.62 E-value=8.3e-07 Score=79.09 Aligned_cols=152 Identities=14% Similarity=0.153 Sum_probs=82.9
Q ss_pred chhhHHhhHHHHH-HcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCC
Q 021808 99 INTVMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSAS 177 (307)
Q Consensus 99 ~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (307)
.+.+..|.|.+++ ..|.+..+.....+ .......++.++.++++||+|||+.+.......++....+ .... +
T Consensus 221 ~~~~~~~~p~~l~~~~g~s~~~~~~~~~-~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~---~~~~-~-- 293 (394)
T PRK03699 221 QLTFISWVPEYAQKKFGMSLEDAGNLVS-NFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLF---VNTD-D-- 293 (394)
T ss_pred HHHHHHHHHHHHHHHcCCChHHhhHHHH-HHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHH---HHcC-C--
Confidence 3455567888885 45776555444333 3334468899999999999999998775544333322221 1111 1
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHH
Q 021808 178 SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILA 257 (307)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (307)
. .+.. .... ..+....+..+....+..|..|.+ ++...|.....+.++..+++.....+.+..+....+...+
T Consensus 294 ~----~~~~-~~~~-~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~ 366 (394)
T PRK03699 294 P----SHLL-YAIL-GLGFFSSAIYTTIITLGSQQTKVA-SPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTAN 366 (394)
T ss_pred c----hHHH-HHHH-HHHHHHHHHHHHHHHHHHHHccCC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhH
Confidence 0 0111 1111 111212222333344566777654 5666777777777777777766665666555444454444
Q ss_pred HHHHHHH
Q 021808 258 GIAVLAV 264 (307)
Q Consensus 258 ~~~~~~~ 264 (307)
++..++.
T Consensus 367 ~~~~~~~ 373 (394)
T PRK03699 367 GLYAVVF 373 (394)
T ss_pred HHHHHHH
Confidence 4444443
No 155
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.62 E-value=4.4e-06 Score=74.58 Aligned_cols=154 Identities=10% Similarity=0.040 Sum_probs=94.3
Q ss_pred hhHHHHHHcCCCChH-HHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchh
Q 021808 105 YSPTIVQMAGFQSNQ-LALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 183 (307)
Q Consensus 105 ~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (307)
-.|.+.+..|.+..+ .......... ...++.+.+|+++||+|.|+++..+.+...+...+..+.-.
T Consensus 48 a~p~L~~elglT~~qv~G~I~s~F~y-sYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~S------------ 114 (511)
T TIGR00806 48 ITPYLLTVLNFTEETVTNEIIPVLPY-SHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTS------------ 114 (511)
T ss_pred HHHHHHHHcCCCHHHhcchHHHHHHH-HHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH------------
Confidence 356666778887666 4444444333 37788899999999999999998877776666665544211
Q ss_pred HHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhH--HHHHHHHH
Q 021808 184 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATF--LILAGIAV 261 (307)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 261 (307)
...+...-++.+....+.. ..+.++...||.+.|++++|+..+...+|..+++..... ....++.... ..+.....
T Consensus 115 l~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~ 192 (511)
T TIGR00806 115 VWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFM 192 (511)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHH
Confidence 1112222222222222222 445788899999999999999988888888877665554 3344443222 22333333
Q ss_pred HHHHHHHhhccC
Q 021808 262 LAVVFVILFVPE 273 (307)
Q Consensus 262 ~~~~~~~~~lpe 273 (307)
+.+++..+++|.
T Consensus 193 ~~a~~~a~~LP~ 204 (511)
T TIGR00806 193 TFSVFLALFLKR 204 (511)
T ss_pred HHHHHHHHhCCC
Confidence 334445577773
No 156
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.62 E-value=2.1e-06 Score=75.16 Aligned_cols=128 Identities=11% Similarity=-0.017 Sum_probs=77.4
Q ss_pred HhhHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCch
Q 021808 104 YYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVY 182 (307)
Q Consensus 104 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (307)
.+.|.+.+. .+.+..... .......+..+++.++.+++.||.|||+.+..+....+++...+... .. +
T Consensus 232 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~----- 300 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYG-WVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLT---PP--N----- 300 (365)
T ss_pred HHhHHHHHHHhCCchHHHH-HHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh---ch--h-----
Confidence 456666664 566554443 33444455577888999999999999998876654444443333221 00 0
Q ss_pred hHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHH
Q 021808 183 GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTV 243 (307)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~ 243 (307)
.+...+...+. +.......+....+..|.+|++.|++..|+......++..+++.....+
T Consensus 301 ~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l 360 (365)
T TIGR00900 301 FPLFLVLWFAI-GVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPL 360 (365)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11222222222 2222223445567889999999999999998888888777665544333
No 157
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.60 E-value=4.6e-06 Score=74.35 Aligned_cols=61 Identities=13% Similarity=0.189 Sum_probs=40.7
Q ss_pred hhHHhhHHHHH-HcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHH
Q 021808 101 TVMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIIS 162 (307)
Q Consensus 101 ~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~ 162 (307)
....+.|.++. ..|.+..+... ..........++.++.|+++||+|||+.++.+....++.
T Consensus 20 ~~~~~~~~~~~~~~g~s~~~~g~-~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~ 81 (396)
T TIGR00882 20 AYFPFFPIWLHDVNGLSKTDTGI-VFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVL 81 (396)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 33345555554 46776655444 444455567889999999999999999987655544433
No 158
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.59 E-value=8.5e-06 Score=71.22 Aligned_cols=175 Identities=21% Similarity=0.244 Sum_probs=96.5
Q ss_pred hhhhhcchhHHHHHHHHHHHHHHHhhcCchhhHHhh-HHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCch
Q 021808 71 YLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYS-PTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRK 149 (307)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR 149 (307)
..+.+|+++.+..+..... .+.+.+....|. |.+.+..|.+....+ +..+...+..++|..++|+++|| +.|
T Consensus 204 ~~~~l~~p~v~~~l~~t~l-----~~~g~F~~ftYi~P~L~~v~g~s~~~vs-~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~ 276 (394)
T COG2814 204 LLRLLRRPGVLLGLLATFL-----FMTGHFALYTYIRPFLESVAGFSVSAVS-LVLLAFGIAGFIGNLLGGRLADR-GPR 276 (394)
T ss_pred HHHHhcCchHHHHHHHHHH-----HHcchhhhHHhHHHHHHHccCCCHhHHH-HHHHHHHHHHHHHHHHHhhhccc-cch
Confidence 5567888877665554322 234444444454 555556677665544 44555556679999999999999 888
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCccccc-ceeecccCCcccchhhhhHHHHH
Q 021808 150 KLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVP-WTLNSEVYPEQYRGICGGMSATV 228 (307)
Q Consensus 150 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ElfPt~~R~~~~g~~~~~ 228 (307)
+.+.......++....+... . . ..+..+....+ .. +......+. ....++. -++.+..+.++..+.
T Consensus 277 ~~l~~~~~l~a~~~l~l~~~--~-~-------~~~~~~~~~~~-wg-~a~~~~~~~~~~~~a~~-~p~~~~~a~sl~~aa 343 (394)
T COG2814 277 RALIAALLLLALALLALTFT--G-A-------SPALALALLFL-WG-FAFSPALQGLQTRLARL-APDAADLAGSLNVAA 343 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHh--c-c-------hHHHHHHHHHH-HH-HHhhhhhhHHHHHhccc-CCCchHHHHHHHHHH
Confidence 87766545444444433221 1 1 01222222222 12 222222221 2334453 245588888888887
Q ss_pred HHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHHHH
Q 021808 229 NWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVV 265 (307)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (307)
-+++..+++..-..+.+..+.....+..+...+++.+
T Consensus 344 ~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~ 380 (394)
T COG2814 344 FNLGIALGAALGGLVLDALGYAATGWVGAALLLLALL 380 (394)
T ss_pred HHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Confidence 7777777776666666665544444444444444444
No 159
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.58 E-value=1.1e-05 Score=71.92 Aligned_cols=147 Identities=16% Similarity=-0.002 Sum_probs=72.8
Q ss_pred hHHHHH-HcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhH
Q 021808 106 SPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGW 184 (307)
Q Consensus 106 ~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (307)
.+.+.+ ..|.+..... .......+..++++++.+++.||.++|+.+..+... ++..+.+. . . .. .+
T Consensus 228 ~~~~~~~~lg~s~~~~G-~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~-~~~~~~~~--~-~-~~-------~~ 294 (393)
T PRK11195 228 VLAWAPVALGITLNQPA-YLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGILM-GLVVLLMA--L-Q-HS-------LL 294 (393)
T ss_pred HHHHHHHHcCCChhHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHH-HHHHHHHH--H-H-hH-------HH
Confidence 344444 3455544433 334444455678889999999999998877655322 22211111 1 1 00 01
Q ss_pred HHHHHHHHHHHHHhcCcccccceeecccCCccc-chhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHH
Q 021808 185 IAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQY-RGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 263 (307)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~-R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (307)
.......+...+... ..+.......|.-|.+. |+++.|+......++..++..... .....+....+.+.+...+++
T Consensus 295 ~~~~~~~~~G~~~g~-~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 372 (393)
T PRK11195 295 PAYPLLILIGALGGF-FVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYS-LLVKLGVPVVAVIVGFGLLVA 372 (393)
T ss_pred HHHHHHHHHHHhhhh-hhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHH-HHHHcCCCHHHHHHHHHHHHH
Confidence 111211111111111 12222344457766655 788888888777777766654443 334455444444444333344
Q ss_pred HHHH
Q 021808 264 VVFV 267 (307)
Q Consensus 264 ~~~~ 267 (307)
..+.
T Consensus 373 ~~~~ 376 (393)
T PRK11195 373 LAMA 376 (393)
T ss_pred HHHH
Confidence 3333
No 160
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.57 E-value=7.6e-06 Score=72.60 Aligned_cols=56 Identities=14% Similarity=0.321 Sum_probs=37.2
Q ss_pred HHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHH
Q 021808 107 PTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISL 163 (307)
Q Consensus 107 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~ 163 (307)
|.+.+..|.+...... ......+..+++.++.+++.||+|+|+.+..+....++..
T Consensus 224 ~~~~~~~g~s~~~~~~-~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~ 279 (382)
T PRK10091 224 PYMMFISGFSETSMTF-IMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLAL 279 (382)
T ss_pred HHHHHhcCCCHHHHHH-HHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHH
Confidence 3343456765554443 3444445578899999999999999998876655544443
No 161
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.57 E-value=6.6e-07 Score=78.63 Aligned_cols=121 Identities=13% Similarity=0.174 Sum_probs=66.0
Q ss_pred hhHHhhHHHHH-HcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCC
Q 021808 101 TVMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSS 179 (307)
Q Consensus 101 ~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (307)
....+.|.+++ ..|.+..+.. ..........+++.+++++++||+|||+.+..+....+++...+.... ... .
T Consensus 243 ~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~---~~~--~ 316 (366)
T TIGR00886 243 GVSSIFAMFFKDQFGLSKVTAG-AYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGL---VSP--L 316 (366)
T ss_pred HHHHHHHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcC---CCc--c
Confidence 33455666665 4566554443 334444455788899999999999998877655444333333322111 100 0
Q ss_pred CchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHH
Q 021808 180 GVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWI 231 (307)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~ 231 (307)
. .+.......+.......+ .+..+.+.+|++| +.|++..|+....+.+
T Consensus 317 ~--~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~ 364 (366)
T TIGR00886 317 S--LAVFIVLFVALFFFSGAG-NGSTFALVPHIFR-RATGAVSGLVGAIGNL 364 (366)
T ss_pred h--HHHHHHHHHHHHHHhccc-cchhhhcchhhch-hhcccHHHHHHHhccC
Confidence 0 111222222222222322 3345677889998 5788888887666544
No 162
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.56 E-value=5.2e-06 Score=73.67 Aligned_cols=173 Identities=14% Similarity=0.019 Sum_probs=92.4
Q ss_pred hhhhhcchhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchH
Q 021808 71 YLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKK 150 (307)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~ 150 (307)
..+++|+|+.+..++..... .........+.|.+.++.|.+......... ......++...+.+++.||+|+|+
T Consensus 198 ~~~~l~~~~~~~~l~~~~l~-----~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~-~~~~~~i~~~~~~~~l~~r~g~~~ 271 (382)
T TIGR00902 198 FIALLKNPMNLRFLAAVCLI-----QGAHAAYYGFSAIYWQAAGISASATGLLWG-IGVLAEIIIFAFSNKLFQNCSARD 271 (382)
T ss_pred HHHHHcChHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHCCCCHhHHHHHHH-HHHHHHHHHHHHhHHHHhhCCHHH
Confidence 45677777665543332211 122233334566677778887665554433 344556777888899999999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHH-H
Q 021808 151 LALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATV-N 229 (307)
Q Consensus 151 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~-~ 229 (307)
++..+.....+....+... ++ .+..+..-.+....+.. ..+....++.+. |.+.|+++.++.... .
T Consensus 272 ~l~~~~~~~~~~~~~~~~~------~~-----~~~~~~~q~l~g~~~~~-~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~ 338 (382)
T TIGR00902 272 LLLISAIACVGRWAIIGAI------EA-----FPLIFLLQILHCGTFAV-CHLAAMRYIAAQ-PGSEIAKLQALYNALAM 338 (382)
T ss_pred HHHHHHHHHHHHHHHHHhH------hh-----HHHHHHHHHHHHHHHHH-HHHHHHHHHHhC-CHhhHHHHHHHHHHHHH
Confidence 9887777666665443221 00 01111111121112211 122233566777 999998888886533 2
Q ss_pred HHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHH
Q 021808 230 WISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 263 (307)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (307)
.++..+++..-..+.+..+. ..+...+.+.+++
T Consensus 339 g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~ 371 (382)
T TIGR00902 339 GGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAA 371 (382)
T ss_pred HHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHH
Confidence 24444444444444444442 3444555544443
No 163
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.55 E-value=5.1e-06 Score=75.13 Aligned_cols=165 Identities=18% Similarity=0.212 Sum_probs=105.9
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHH
Q 021808 115 FQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYI 194 (307)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (307)
.+.++..+..+....+ .+++.+.+++++||+|-|+++..+..+.++..++.-+...... + .++.+-++.
T Consensus 70 ws~~~k~~i~ss~~~G-~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~---------~-~~~~~R~lq 138 (466)
T KOG2532|consen 70 WSSTEKGLIFSSFFWG-YILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGF---------Y-LLLVLRFLQ 138 (466)
T ss_pred CCHHHHHHHHHHHHHH-HHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcc---------h-hhHHHHHHh
Confidence 3334444555544444 6788888999999999999998887777777766544432211 1 122222333
Q ss_pred HHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHH-hCCchhHHHHHHHHHHHHHHHHhhc--
Q 021808 195 AFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAEL-VGTGATFLILAGIAVLAVVFVILFV-- 271 (307)
Q Consensus 195 ~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l-- 271 (307)
+.......+....+.+.-.|++.|++..++..+...+|.++.......+.+. .|+...|.+.+.+.++..++..++.
T Consensus 139 Gl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d 218 (466)
T KOG2532|consen 139 GLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSD 218 (466)
T ss_pred HHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcC
Confidence 3333334455567889999999999999999888888888877666656655 6776777777776665554333332
Q ss_pred -cC-CCCCCHHHHHHHHhhcc
Q 021808 272 -PE-TQGLTFLEVEQMWKERA 290 (307)
Q Consensus 272 -pe-t~~~~l~e~~~~~~~~~ 290 (307)
|+ .+..+-+|.+..-+++.
T Consensus 219 ~P~~h~~is~~El~~I~~~k~ 239 (466)
T KOG2532|consen 219 SPSKHPNISEKELKYIEKGKS 239 (466)
T ss_pred CcccCCCCCHHHHHHHHhccc
Confidence 43 34556667666655444
No 164
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.54 E-value=7.6e-06 Score=72.80 Aligned_cols=173 Identities=14% Similarity=0.102 Sum_probs=89.3
Q ss_pred HHhhcCchhhHHhhHHHHHHcCCCChHHHHHH-HHHHHHHHHHHHHHH-HHhhcccCchHHHHHhHHHHHH-HHHHHHHH
Q 021808 93 FQQFTGINTVMYYSPTIVQMAGFQSNQLALLL-SLAVAGTNAVGTIVG-IYLIDHFGRKKLALSSLAGVII-SLVLLSWA 169 (307)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~-~~l~Dr~GrR~~l~~~~~~~~~-~~~~~~~~ 169 (307)
+.|...+.....+.|.++++.|.+..+..... ........++..++. ++..||+|||+..++....... +...+.
T Consensus 11 ~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~-- 88 (390)
T TIGR02718 11 LSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLA-- 88 (390)
T ss_pred HHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHH--
Confidence 33444556666788999999998776655542 122234455666666 6689999999986544322111 111111
Q ss_pred HhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCC
Q 021808 170 FISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGT 249 (307)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (307)
...... ....+.. ... ....++....-+....+..|..+.+.|+...+.......+|..+++.....+.+..++
T Consensus 89 ~~~~~~----~~~~~~~-~~~-~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw 162 (390)
T TIGR02718 89 LVGPDV----AGAGWAV-GLL-ACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQ 162 (390)
T ss_pred cCCcch----hhHHHHH-HHH-HHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 110000 0011111 111 1122222222333445667888888777665555444455666655444444555566
Q ss_pred chhHHHHHHHHHHHHHHHHhhccC
Q 021808 250 GATFLILAGIAVLAVVFVILFVPE 273 (307)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~lpe 273 (307)
...|.+.+++..+..+...+..|+
T Consensus 163 ~~~f~~~a~l~~~~~~~~~~~~~~ 186 (390)
T TIGR02718 163 RPAFLLVACVPLASLVCVLWLKDR 186 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCC
Confidence 556666666665555544344444
No 165
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.51 E-value=4.5e-07 Score=79.02 Aligned_cols=126 Identities=24% Similarity=0.332 Sum_probs=72.8
Q ss_pred hhHHhhHHH-HHHcCCC-ChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCC
Q 021808 101 TVMYYSPTI-VQMAGFQ-SNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASS 178 (307)
Q Consensus 101 ~~~~~~~~~-~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (307)
....+.|.+ .+..+.+ ..+.. ..........+++.++.++++||+|+|+..........+..+.+....... .
T Consensus 224 ~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--- 298 (352)
T PF07690_consen 224 GFSFFLPLYLQEVLGFSGPSQAG-LLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSS-S--- 298 (352)
T ss_dssp HHHHHHHHHCCHHHHCCTHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHC-H---
T ss_pred HhhcccchhhhhccCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhh-h---
Confidence 345666765 4566665 23333 233444445677789999999999998776654444433333322111110 0
Q ss_pred CCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHH
Q 021808 179 SGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIV 236 (307)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~ 236 (307)
....+....+. +.......+....+..|.+|++.|++..|+....+.++..++
T Consensus 299 ----~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~ig 351 (352)
T PF07690_consen 299 ----PVWLIIALFLI-GFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIG 351 (352)
T ss_dssp ----HHHHHHHHHHH-HHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 01111122222 222222345566788999999999999999888887777654
No 166
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.49 E-value=4.7e-06 Score=75.19 Aligned_cols=162 Identities=20% Similarity=0.186 Sum_probs=81.0
Q ss_pred HHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcc----cCchHH-HHHhHHHHHHHHHHHHHHHhhcCCCCCCCc
Q 021808 107 PTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH----FGRKKL-ALSSLAGVIISLVLLSWAFISGSSASSSGV 181 (307)
Q Consensus 107 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr----~GrR~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (307)
+++.+..|.+..... .......+...+..++.|+++|| +|||+. ++.+....+++.+.+++. . .. .....
T Consensus 24 ~~~~~~~g~s~~~~g-~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~--~-~~-~~~~~ 98 (437)
T TIGR00792 24 FFYTDVLGLSAAFVG-TLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTT--P-DF-SATGK 98 (437)
T ss_pred HHHHHccCCCHHHHH-HHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhC--C-CC-CcchH
Confidence 334445677655543 33444445578899999999998 688554 455555555444433221 1 10 00000
Q ss_pred hhHHHHHHHHHHHHHHhcCcccccceeecccC-CcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHh-------CCchhH
Q 021808 182 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVY-PEQYRGICGGMSATVNWISNLIVAQTFLTVAELV-------GTGATF 253 (307)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Elf-Pt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 253 (307)
..+ ......++...... ......++.+|+. +.+.|++..++....+.++..+.+.....+.... ++...+
T Consensus 99 ~~~-~~~~~~~~~~~~~~-~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~ 176 (437)
T TIGR00792 99 LVY-AYITYILLGLFYSF-VNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFA 176 (437)
T ss_pred HHH-HHHHHHHHHHHHHh-hcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHH
Confidence 111 11111222222221 1222235678887 4678988888777766666655544333332221 111233
Q ss_pred HHHHHHHHHHHHHHHhhccCCC
Q 021808 254 LILAGIAVLAVVFVILFVPETQ 275 (307)
Q Consensus 254 ~~~~~~~~~~~~~~~~~lpet~ 275 (307)
.+.+++..+......+..||++
T Consensus 177 ~i~~~l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 177 LVLALIGVVSLIICFFGTKERY 198 (437)
T ss_pred HHHHHHHHHHHHHHHcCCEecC
Confidence 4444555555444555667754
No 167
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.46 E-value=7e-06 Score=75.50 Aligned_cols=151 Identities=14% Similarity=0.086 Sum_probs=82.0
Q ss_pred hhhhcchhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchH
Q 021808 72 LDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKK 150 (307)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~ 150 (307)
.++++++..+...+... ......+...+|.|.+++. .|.+..+ +-...........++.++.|++.||+|||+
T Consensus 253 ~~lf~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~lq~v~g~s~~~-ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~ 326 (495)
T PRK14995 253 MRLFTHRIILSGVVMAM-----TAMITLVGFELLMAQELQFVHGLSPLE-AGMFMLPVMVASGFSGPIAGILVSRLGLRL 326 (495)
T ss_pred HHHhCCcccHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHcCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHcCchH
Confidence 45677665544332221 1112233444567777765 4665444 444455555667889999999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHH
Q 021808 151 LALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNW 230 (307)
Q Consensus 151 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~ 230 (307)
.+..+....++....+... ..... . +.......+...... ...+.......+..|.+.|+.+.++......
T Consensus 327 ~~~~g~~~~~~~~~~l~~~--~~~~~---~---~~~~~~~~l~G~g~g-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 397 (495)
T PRK14995 327 VATGGMALSALSFYGLAMT--DFSTQ---Q---WQAWGLMALLGFSAA-SALLASTSAIMAAAPPEKAAAAGAIETMAYE 397 (495)
T ss_pred HHHHHHHHHHHHHHHHHHh--cCCCc---h---HHHHHHHHHHHHhHH-HHHHHHHHHHHhcCCHHhcchHHHHHHHHHH
Confidence 8876665554444332221 11111 0 111111112111111 1122233455678899999998888777766
Q ss_pred HHHHHHH
Q 021808 231 ISNLIVA 237 (307)
Q Consensus 231 ~~~~~~~ 237 (307)
+|..++.
T Consensus 398 lG~~~G~ 404 (495)
T PRK14995 398 LGAGLGI 404 (495)
T ss_pred HHHHHHH
Confidence 6665544
No 168
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.46 E-value=1.6e-05 Score=70.58 Aligned_cols=89 Identities=16% Similarity=0.121 Sum_probs=52.7
Q ss_pred chhhhhcchhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCch
Q 021808 70 RYLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRK 149 (307)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR 149 (307)
++.+++|+|..+..++...... ........+.+.+.++.|.+......... ......++...+.+++.||+|+|
T Consensus 197 ~~~~i~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~g~s~~~~g~~~~-~~~~~~~~~~~~~g~l~~r~~~~ 270 (382)
T PRK11128 197 AWKALLKEPTVWRFLLCVSLLQ-----GSHAAYYGFSAIYWQAAGYSASTIGYLWS-LGVVAEVLIFAFSNRLFRRWSAR 270 (382)
T ss_pred hHHHHHcChhHHHHHHHHHHHH-----HHhHhHHHHHHHHHHHCCCCHhHHHHHHH-HHHHHHHHHHHHHHHHHHHCCHH
Confidence 4567777776655433322211 11222334455566667776555444434 33345667778889999999999
Q ss_pred HHHHHhHHHHHHHHH
Q 021808 150 KLALSSLAGVIISLV 164 (307)
Q Consensus 150 ~~l~~~~~~~~~~~~ 164 (307)
+.+..+....++..+
T Consensus 271 ~~l~~~~~~~~~~~~ 285 (382)
T PRK11128 271 DLLLLSAICGVVRWG 285 (382)
T ss_pred HHHHHHHHHHHHHHH
Confidence 998776665555443
No 169
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.41 E-value=7.9e-07 Score=76.49 Aligned_cols=139 Identities=20% Similarity=0.149 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccce
Q 021808 128 VAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWT 207 (307)
Q Consensus 128 ~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (307)
...++++..++.|.++||+|+|..+++|+..+..+.+++++.... .+.++.-.+-....+ .......+
T Consensus 115 kA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy-----------~~l~vAR~LQgvgsA-~~~tsgla 182 (464)
T KOG3764|consen 115 KALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSY-----------PMLFVARSLQGVGSA-FADTSGLA 182 (464)
T ss_pred HHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchh-----------HHHHHHHHHhhhhHH-HHHhhhHH
Confidence 344578889999999999999999999998888888877643111 122222222211111 11223346
Q ss_pred eecccCCccc-chhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCCCCC
Q 021808 208 LNSEVYPEQY-RGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLT 278 (307)
Q Consensus 208 ~~~ElfPt~~-R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~ 278 (307)
++++.||.+. |+++.|+...+-..|.++++..-..+-+..|...+|.++++++++-..+..+.++.++..+
T Consensus 183 mlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 183 MLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred HHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCc
Confidence 7799999988 6999999888877777776655545556667777899999999888877767776666554
No 170
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.40 E-value=2.2e-06 Score=75.51 Aligned_cols=189 Identities=15% Similarity=0.119 Sum_probs=98.8
Q ss_pred hhhhhcchhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHHcCCCCh---HHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 021808 71 YLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSN---QLALLLSLAVAGTNAVGTIVGIYLIDHFG 147 (307)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~Dr~G 147 (307)
..+++|.|+.|...+........+.. .....+.++...-.+.. ...-+......++.++...+..++.+|+|
T Consensus 213 ~~~l~k~~~fw~~~l~v~g~~~~Y~v-----fdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig 287 (412)
T PF01306_consen 213 VLSLFKMRNFWFFVLFVIGVAAIYDV-----FDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIG 287 (412)
T ss_dssp HHHHTTSHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHhcchhHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45678888877755544433333221 11223334443322211 11122233344456677778899999999
Q ss_pred chHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHH
Q 021808 148 RKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSAT 227 (307)
Q Consensus 148 rR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~ 227 (307)
.|+.++++..++++=....++. + + .+.....-.+...-+.... ....-|+++.||+|..++...+...
T Consensus 288 ~k~~Lllag~i~~iRi~~~~~~-----~-~-----~~~i~~~klLH~~e~~l~l-va~fkYI~~~fd~rlsAt~y~v~~~ 355 (412)
T PF01306_consen 288 AKNLLLLAGVIMAIRIIGSGFA-----T-N-----PWVISLIKLLHALEFPLLL-VAAFKYITAHFDKRLSATLYLVGFQ 355 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT--------S-----HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHS-GGGHHHHHHHHHT
T ss_pred hHhHHHHHHHHHHHHHHHHhhh-----c-c-----hHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCHhHHHHHHHHHHH
Confidence 9999987766666655444321 1 0 0111111111111111111 1112578999999999887776543
Q ss_pred H-HHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCCC
Q 021808 228 V-NWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQG 276 (307)
Q Consensus 228 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 276 (307)
. ..++..+.+.....+.+..|....+.+++.+.+...++..+.++..+.
T Consensus 356 ~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 356 FAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 3 334555555555555566665557778888777777777777765544
No 171
>PRK09669 putative symporter YagG; Provisional
Probab=98.40 E-value=1.5e-05 Score=72.17 Aligned_cols=129 Identities=13% Similarity=0.111 Sum_probs=66.1
Q ss_pred HhhHHHH-HHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcc----cCchHHH-HHhHHHHHHHHHHHHHHHhhcCCCC
Q 021808 104 YYSPTIV-QMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH----FGRKKLA-LSSLAGVIISLVLLSWAFISGSSAS 177 (307)
Q Consensus 104 ~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr----~GrR~~l-~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (307)
.|++.++ +..|.+.... -.+..+..+...+..++.|+++|| +|||+.. +.+.+..+++....++. ... .
T Consensus 30 ~~l~~~~t~~~gls~~~~-g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~---p~~-~ 104 (444)
T PRK09669 30 LFLAYFYTDVFGLSAAIM-GTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYT---PDF-G 104 (444)
T ss_pred HHHHHHHHHhcCCCHHHH-HHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhC---CCC-C
Confidence 3444444 4567765443 334444455577889999999999 7886554 45545444444333221 110 0
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCcccccceeecccC-CcccchhhhhHHHHHHHHHHHHHHHh
Q 021808 178 SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVY-PEQYRGICGGMSATVNWISNLIVAQT 239 (307)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Elf-Pt~~R~~~~g~~~~~~~~~~~~~~~~ 239 (307)
......+. .+...++...+.. ......++.+|+. +.+.|.+..+.....+.+|..+++..
T Consensus 105 ~~~~~~~~-~~~~~l~~~~~t~-~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~ 165 (444)
T PRK09669 105 ATGKIIYA-CVTYILLSLVYTA-INVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVI 165 (444)
T ss_pred cchHHHHH-HHHHHHHHHHHHh-hcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01111111 1111222222222 2222236778987 45678877777777766766655443
No 172
>PRK09848 glucuronide transporter; Provisional
Probab=98.40 E-value=9.3e-06 Score=73.67 Aligned_cols=159 Identities=11% Similarity=0.059 Sum_probs=76.9
Q ss_pred hhhhhcchhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchH
Q 021808 71 YLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKK 150 (307)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~ 150 (307)
+.+++++|..+...+..... ..+......+.+++.+.....+...............+++.++.+++.||+|+|+
T Consensus 221 ~~~l~~n~~f~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~ 295 (448)
T PRK09848 221 LQTLKRNRPLFMLCIGALCV-----LISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKN 295 (448)
T ss_pred HHHHhCCchHHHHHHHHHHH-----HHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH
Confidence 45577777665543332211 1111222223444444322223332323233323345678889999999999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCc-------ccchhhhh
Q 021808 151 LALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPE-------QYRGICGG 223 (307)
Q Consensus 151 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt-------~~R~~~~g 223 (307)
.+..+..+.++..+.+.+ .. .. . .+.......+.... .....+..+++.+|.-|. +.++...|
T Consensus 296 ~~~~g~~~~~i~~~~~~~--~~--~~---~--~~~~~~~~~l~g~G-~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~ 365 (448)
T PRK09848 296 TFLIGALLGTCGYLLFFW--VS--VW---S--LPVALVALAIASIG-QGVTMTVMWALEADTVEYGEYLTGVRIEGLTYS 365 (448)
T ss_pred HHHHHHHHHHHHHHHHHH--cC--ch---h--HHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhHHhhCccchhHHHH
Confidence 988776665555443321 11 00 0 11112212221111 112233445666677654 34566777
Q ss_pred HHHHHHHHHHHHHHHhhHHHH
Q 021808 224 MSATVNWISNLIVAQTFLTVA 244 (307)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~ 244 (307)
+......++..+++.....+.
T Consensus 366 ~~~~~~klg~aig~~i~g~~l 386 (448)
T PRK09848 366 LFSFTRKCGQAIGGSIPAFIL 386 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 766666666666554443333
No 173
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.40 E-value=2.7e-05 Score=70.20 Aligned_cols=159 Identities=18% Similarity=0.223 Sum_probs=83.6
Q ss_pred chhhhhcchhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCch
Q 021808 70 RYLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRK 149 (307)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR 149 (307)
.+++++++|..++.++... +. ..+......+.+++.+....++...+ .......+..+++.++.++++||+|+|
T Consensus 217 ~~~~~~~nr~~~~l~~~~~-~~----~~~~~~~~~~~~y~~~~vl~~~~~~~-~~~~~~~~~~~v~~~~~~~l~~r~gk~ 290 (428)
T PF13347_consen 217 SLRSLFRNRPFRILLLAFF-LQ----WLAFALMNTFLPYYFTYVLGNEGLIS-IFMLIFFVASIVGSPLWGRLSKRFGKK 290 (428)
T ss_pred chhhhcccchHHHHHHHHH-HH----HhhhhhhhhHHHHHHHHHhcCchhhH-HHHHHHHHHHHHHHHHHHHHHHHccce
Confidence 4566777777655433322 11 12222222333444443322232222 334445556788999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcc-----cc--hhhh
Q 021808 150 KLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQ-----YR--GICG 222 (307)
Q Consensus 150 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~-----~R--~~~~ 222 (307)
+.+..+....++..+.+.+... .+ .+...+. ....+....+.....+++.+|+.+.. .| |...
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~-~~--------~~~~~i~-~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~ 360 (428)
T PF13347_consen 291 KVYIIGLLLAALGFLLLFFLGP-GS--------PWLVLIL-FILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYF 360 (428)
T ss_pred eehhhhHHHHHHHHHHHHHHHh-hh--------HHHHHHH-HHHhHhhhcccccccccccccchhhHHHhcCCCchHHHH
Confidence 9988877776666555433221 11 1112222 22223333445577788899998733 23 4444
Q ss_pred hHHHHHHHHHHHHHHHhhHHHH
Q 021808 223 GMSATVNWISNLIVAQTFLTVA 244 (307)
Q Consensus 223 g~~~~~~~~~~~~~~~~~~~~~ 244 (307)
|+......++..++......+.
T Consensus 361 s~~~~~~k~~~~la~~i~g~~l 382 (428)
T PF13347_consen 361 SVNSFFIKIGQGLAGAIVGLLL 382 (428)
T ss_pred HhhhhhhHHHHHHHHHHHHHHH
Confidence 5554555555544444333333
No 174
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.39 E-value=1.8e-06 Score=75.69 Aligned_cols=103 Identities=23% Similarity=0.193 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhc
Q 021808 120 LALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAP 199 (307)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (307)
.....+....+..+.|.++.|++.||+|||+++...+++++++.+........ ..+... .+.+.+.-.+.+.-..
T Consensus 85 i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~---~~~~~~--m~~L~~~R~~LGiGIG 159 (538)
T KOG0252|consen 85 VLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGT---TSPLGV--MMTLCFFRFLLGIGIG 159 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCC---CCCcch--hhHHHHHHHHhhcccc
Confidence 33444555555578899999999999999999877777777666543322111 111122 2223334444555567
Q ss_pred CcccccceeecccCCcccchhhhhHHHH
Q 021808 200 GMGPVPWTLNSEVYPEQYRGICGGMSAT 227 (307)
Q Consensus 200 ~~~~~~~~~~~ElfPt~~R~~~~g~~~~ 227 (307)
|-+|+..+.++|.--.+.|+.-.+...+
T Consensus 160 GDYPlSAtI~SE~an~~~RGa~iaavFa 187 (538)
T KOG0252|consen 160 GDYPLSATIMSESANKKTRGAFIAAVFA 187 (538)
T ss_pred CCCcchHHHhhhhhhhccccceeEEEEE
Confidence 8899999999999999999865444333
No 175
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.38 E-value=3.9e-09 Score=95.66 Aligned_cols=101 Identities=25% Similarity=0.310 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccc
Q 021808 127 AVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPW 206 (307)
Q Consensus 127 ~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (307)
...+..++|++++|+++||+|||+.++.+....++..+......... +. +...++ -.+.+....+..+...
T Consensus 54 ~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~---~~-----~~~~~~-R~~~G~~~g~~~~~~~ 124 (451)
T PF00083_consen 54 SFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYN---NF-----WMLLIG-RFLIGFGIGGAYVVSP 124 (451)
T ss_pred HHHhhhccccccccccccccccccccccccccccccccccccccccc---cc-----cccccc-cccccccccccccccc
Confidence 33344678999999999999999998877666655555443221000 00 111122 2222333344556777
Q ss_pred eeecccCCcccchhhhhHHHHHHHHHHHHH
Q 021808 207 TLNSEVYPEQYRGICGGMSATVNWISNLIV 236 (307)
Q Consensus 207 ~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~ 236 (307)
.|..|..|++.|+...++......+|..++
T Consensus 125 ~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~ 154 (451)
T PF00083_consen 125 IYISEIAPPKHRGFLSSLFQLFWALGILLA 154 (451)
T ss_pred cccccccccccccccccccccccccccccc
Confidence 899999999999877766555544444433
No 176
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.34 E-value=1.5e-05 Score=73.27 Aligned_cols=162 Identities=19% Similarity=0.188 Sum_probs=90.4
Q ss_pred hhHHHHH-HcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchh
Q 021808 105 YSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 183 (307)
Q Consensus 105 ~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (307)
.+|.+.+ ..+.+.....+..+.. .+.+++|.++.+.+.+|+++++++..+.+..+++.+.+.+.. ..
T Consensus 240 LlPl~a~~~l~~~a~~yGll~a~~-gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~-----------~~ 307 (524)
T PF05977_consen 240 LLPLFARDVLGGGASGYGLLLAAF-GVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSP-----------SF 307 (524)
T ss_pred hhhHHHHHHhCCcHHHHHHHHHHH-HHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcch-----------HH
Confidence 3566554 4566555544444433 333677888888888889888887766665555544433210 01
Q ss_pred HHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHH
Q 021808 184 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLA 263 (307)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (307)
+.....+.+...... .......+..-+..|.++||+..++.......+..+++.....+.+..+....+.+.++..+++
T Consensus 308 ~~~~~~l~l~G~~~~-~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~ 386 (524)
T PF05977_consen 308 WLALIALFLAGAAWI-IANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLS 386 (524)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 222222222111111 1122223455688899999999999888877777777777766777666554555444444444
Q ss_pred HHHHH-hhccCCCCCCH
Q 021808 264 VVFVI-LFVPETQGLTF 279 (307)
Q Consensus 264 ~~~~~-~~lpet~~~~l 279 (307)
.++.. .-+|+.+..++
T Consensus 387 ~~~~~~~~l~~~~~~d~ 403 (524)
T PF05977_consen 387 ALIALRFPLRQGEELDL 403 (524)
T ss_pred HHHHHHhcCcccccCCC
Confidence 43332 23455444333
No 177
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.33 E-value=3.6e-05 Score=68.33 Aligned_cols=162 Identities=14% Similarity=0.157 Sum_probs=81.0
Q ss_pred chhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHh-HHHHHHHHHHHHHHHhhcCCCC
Q 021808 99 INTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSS-LAGVIISLVLLSWAFISGSSAS 177 (307)
Q Consensus 99 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~-~~~~~~~~~~~~~~~~~~~~~~ 177 (307)
......++|.++++.|.+..+.....+. ......++.++.+.++||+|||....-. .....+.. +...... .
T Consensus 20 ~g~~~p~l~~~l~~~g~s~~~iG~~~~~-~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~--~~~~~~~--~-- 92 (382)
T PRK11128 20 YGVFLPFWSVWLKGQGYTPETIGLLLGA-GLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFA--VAFWFGA--H-- 92 (382)
T ss_pred HHHHhhhHHHHHHhcCCCHHHHHHHHHH-HHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHH--HHHHHhc--c--
Confidence 3444556777888888876665555444 4445688899999999999995322111 11111111 1111111 1
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHH
Q 021808 178 SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILA 257 (307)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (307)
. .+...+...+. ........+...++..+. . +.|+...|.....+.++..+++.....+.+..++...+...+
T Consensus 93 --~--~~~l~i~~~l~-g~~~~~~~~~~~a~~~~~-~-~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~ 165 (382)
T PRK11128 93 --S--FWLLFVAIGLF-NLFFSPLVPLTDALANTW-Q-KQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILT 165 (382)
T ss_pred --c--HHHHHHHHHHH-HHHHcccccHHHHHHHHH-H-hhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHH
Confidence 0 12222222222 222223334444454444 2 336666677767777777666665555555556555554444
Q ss_pred HHHHHHHHHHHhhccCCC
Q 021808 258 GIAVLAVVFVILFVPETQ 275 (307)
Q Consensus 258 ~~~~~~~~~~~~~lpet~ 275 (307)
...++.. +..++.||.+
T Consensus 166 ~~~~~~~-~~~~~~~~~~ 182 (382)
T PRK11128 166 AGVASML-LGQLLRPTIM 182 (382)
T ss_pred HHHHHHH-HHHHccCCCC
Confidence 3333222 2333456543
No 178
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.33 E-value=1e-05 Score=71.01 Aligned_cols=134 Identities=10% Similarity=0.059 Sum_probs=70.5
Q ss_pred hhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhccc-CchHHHHHhHHHHHHHHHHHHHHHhhcCCCCC
Q 021808 100 NTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHF-GRKKLALSSLAGVIISLVLLSWAFISGSSASS 178 (307)
Q Consensus 100 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~-GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (307)
+....|.|.+++..|.+...... ......+..+++.++.+++.||+ +||+.+..+....+++.+.+.+.. ..
T Consensus 214 ~~~~~~lp~~~~~~g~~~~~~g~-~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--- 286 (355)
T TIGR00896 214 YSLIGWLPAILISHGASAATAGS-LLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAP---MH--- 286 (355)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhh---hh---
Confidence 34456788888877776554443 34444555788999999999999 455555555444444443332210 00
Q ss_pred CCchhHHHHHHHHHHHHHHhcCcccccceeec-ccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHh
Q 021808 179 SGVYGWIAVIGLALYIAFFAPGMGPVPWTLNS-EVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELV 247 (307)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 247 (307)
.... ...++ ........+....... +..+++.++...|+....+.++..+++.....+.+..
T Consensus 287 -----~~~~-~~~l~-g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~ 349 (355)
T TIGR00896 287 -----GLWA-WALVL-GLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDIS 349 (355)
T ss_pred -----HHHH-HHHHH-HHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0011 11111 1111122223223333 3344566777777777777666666555444444443
No 179
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.32 E-value=1.6e-05 Score=72.73 Aligned_cols=157 Identities=18% Similarity=0.214 Sum_probs=98.3
Q ss_pred hHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCc
Q 021808 102 VMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGV 181 (307)
Q Consensus 102 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (307)
+..+.+.+.+..+.+..+.++..++.. .+..+.+++.+.+.||+|.|++.+.+..++.+..+...+...
T Consensus 65 ~Gv~~~~~~~~f~~s~~~~~~i~sl~~-~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~---------- 133 (509)
T KOG2504|consen 65 FGLLFEELMDYFGSSSSQIAWIGSLLL-GVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATS---------- 133 (509)
T ss_pred ehhhHHHHHHHhCCCccHHHHHHHHHH-HHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhh----------
Confidence 334456667777776666555555544 446788999999999999999998887777666655433211
Q ss_pred hhHHHHHHHHHHH-HHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHH
Q 021808 182 YGWIAVIGLALYI-AFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIA 260 (307)
Q Consensus 182 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (307)
.+...+...+.. .++++...|.. ...+. +..+.|+.+.|++.+...+|.++.+..-..+.+..|+...+.+++.+.
T Consensus 134 -i~~l~lt~gvi~G~G~~~~~~pai-viv~~-YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~ 210 (509)
T KOG2504|consen 134 -LWQLYLTFGVIGGLGLGLIYLPAV-VILGT-YFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGIS 210 (509)
T ss_pred -HHHHHHHHHHHhhccchhhhcchh-hhhhh-HhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 112222222221 22222223332 33344 455559999999888777777776666666677778777777777777
Q ss_pred HHHHHHHHhhcc
Q 021808 261 VLAVVFVILFVP 272 (307)
Q Consensus 261 ~~~~~~~~~~lp 272 (307)
+-..+......|
T Consensus 211 l~~~~~~~~~rp 222 (509)
T KOG2504|consen 211 LNVLVAGALLRP 222 (509)
T ss_pred HHHHHHHHHcCC
Confidence 666555555555
No 180
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.30 E-value=0.0001 Score=65.68 Aligned_cols=47 Identities=26% Similarity=0.415 Sum_probs=29.5
Q ss_pred hhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHH
Q 021808 105 YSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLA 152 (307)
Q Consensus 105 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l 152 (307)
..|.+.+..|.+....... .....+..+++.++.+++.||.+|+...
T Consensus 239 ~~p~~~~~~g~s~~~~g~~-~~~~~~~~iig~~~~~~l~~r~~~~~l~ 285 (394)
T PRK10213 239 IRPVYMNLAGFGVDGLTLV-LLSFGIASFVGTSLSSFILKRSVKLALA 285 (394)
T ss_pred HHHHHHHhcCCChhHHHHH-HHHHHHHHHHHHHHHHHHHhccchhHHH
Confidence 3466767777765543333 3333445678889999999996544333
No 181
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.30 E-value=6.1e-05 Score=66.83 Aligned_cols=145 Identities=18% Similarity=0.231 Sum_probs=78.8
Q ss_pred chhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHH-HHHHHHHHHHHHhhcCCCC
Q 021808 99 INTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAG-VIISLVLLSWAFISGSSAS 177 (307)
Q Consensus 99 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~-~~~~~~~~~~~~~~~~~~~ 177 (307)
.....-|.|.++++.|.+..+.....+.. .....++.++.+.++||.|||......... .++..+. ..... ++
T Consensus 20 ~~~~~p~l~~~l~~~g~s~~~ig~~~s~~-~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~--~~~~~-~~-- 93 (382)
T TIGR00902 20 YGIFLPFFPAWLKGIGLGEEMIGLLIGAA-LIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAA--FSAGA-HN-- 93 (382)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH--HHHhh-hh--
Confidence 34445667788888888766655544443 444678889999999999986543221111 1111111 11111 10
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHH
Q 021808 178 SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILA 257 (307)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (307)
.+..++...+...+.+ ...+....+..+ + .+.|+...|.....+.+|..+++.....+.+..++...+.+..
T Consensus 94 -----~~~l~~~~~l~~~~~~-~~~p~~~al~~~-~-~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~ 165 (382)
T TIGR00902 94 -----AWLLFIAIGLFALFFS-AGMPIGDALANT-W-QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILT 165 (382)
T ss_pred -----HHHHHHHHHHHHHHHc-cchhHHHHHHHH-H-HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHH
Confidence 1222222222222322 234444455444 2 4667778888888887777777665555555566555554443
No 182
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.26 E-value=8.1e-05 Score=66.26 Aligned_cols=36 Identities=19% Similarity=0.241 Sum_probs=24.3
Q ss_pred ccccceeecccCCcccchhhhhHHHHHHHHHHHHHHH
Q 021808 202 GPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQ 238 (307)
Q Consensus 202 ~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~ 238 (307)
.+....+..|.+| +.+++..++......++..+++.
T Consensus 317 ~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~ 352 (394)
T PRK11652 317 FPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAAL 352 (394)
T ss_pred HHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHH
Confidence 3444456678888 46888888877776666665554
No 183
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.25 E-value=1.7e-05 Score=72.59 Aligned_cols=40 Identities=18% Similarity=0.071 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHH
Q 021808 126 LAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVL 165 (307)
Q Consensus 126 ~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~ 165 (307)
....+..+++.++.++++||+|||+.+..+....++..+.
T Consensus 273 ~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~ 312 (473)
T PRK10429 273 SYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGV 312 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 3344456788889999999999999987766554444333
No 184
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.24 E-value=7.1e-05 Score=66.91 Aligned_cols=130 Identities=12% Similarity=0.018 Sum_probs=65.5
Q ss_pred HhhHHHHHHcCCCChHHHHHHHHHHHHHHHHH-HHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCch
Q 021808 104 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVG-TIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVY 182 (307)
Q Consensus 104 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (307)
.+.|.+.++.+.++........... .....+ .++..+..||.+.|+.+..+....++....+... .. .
T Consensus 229 ~~~p~~~~~~~~~~~~~g~l~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~----~~------~ 297 (400)
T PRK11646 229 LMLPIMVNDIAGSPSAVKWMYAIEA-CLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV----SN------L 297 (400)
T ss_pred HhhhhhHHhhcCCchHHHHHHHHHH-HHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh----hh------H
Confidence 4567777776665544333322222 222333 3344444456666665554444444333322211 10 0
Q ss_pred hHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHH
Q 021808 183 GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAEL 246 (307)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 246 (307)
+.......++..... ...+....+..|..|.+.|+++.|+......++..+++.....+.+.
T Consensus 298 -~~~~~~~~l~~~g~~-~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 298 -QQLFTLICLFYIGSI-IAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDL 359 (400)
T ss_pred -HHHHHHHHHHHHHHH-HHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHH
Confidence 111111111111111 22334446778999999999999988777777777666555554444
No 185
>PRK11462 putative transporter; Provisional
Probab=98.21 E-value=9.7e-05 Score=67.29 Aligned_cols=130 Identities=13% Similarity=0.046 Sum_probs=67.7
Q ss_pred HhhHHHHH-HcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcc----cCchHHHH-HhHHHHHHHHHHHHHHHhhcCCCC
Q 021808 104 YYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH----FGRKKLAL-SSLAGVIISLVLLSWAFISGSSAS 177 (307)
Q Consensus 104 ~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr----~GrR~~l~-~~~~~~~~~~~~~~~~~~~~~~~~ 177 (307)
.|+.+++. ..|.+... .-.+.++.-+...+.-|+.|+++|| +|||+..+ ++.+..+++...++.. ...+
T Consensus 30 ~~l~~fyt~~~Gl~~~~-~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~--p~~s-- 104 (460)
T PRK11462 30 LYMMFFYTDIFGIPAGF-VGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYST--PDLS-- 104 (460)
T ss_pred HHHHHHHHHhhCCCHHH-HHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhC--CCCC--
Confidence 34444444 45665433 3333444455577889999999996 69887654 4545555554433221 1101
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCcccccceeecccCC-cccchhhhhHHHHHHHHHHHHHHHhh
Q 021808 178 SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYP-EQYRGICGGMSATVNWISNLIVAQTF 240 (307)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP-t~~R~~~~g~~~~~~~~~~~~~~~~~ 240 (307)
......+. .+...++...+.....| ..++.+|+-+ .+.|++..+.-...+.++..+++...
T Consensus 105 ~~~~~~y~-~~~~~~~~~~~t~~~ip-y~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~ 166 (460)
T PRK11462 105 MNGKMIYA-AITYTLLTLLYTVVNIP-YCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLM 166 (460)
T ss_pred cchHHHHH-HHHHHHHHHHHHHHhcc-HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111 11111222222211122 2367788876 67798888887777777766554443
No 186
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.20 E-value=1.1e-05 Score=72.76 Aligned_cols=162 Identities=19% Similarity=0.166 Sum_probs=85.8
Q ss_pred HHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhc----ccCchHHHH-HhHHHHHHHHHHHHHHHhhcCCCCCCCc
Q 021808 107 PTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLID----HFGRKKLAL-SSLAGVIISLVLLSWAFISGSSASSSGV 181 (307)
Q Consensus 107 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~D----r~GrR~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (307)
+++.+..|.+....+ .+....-+...+.-++.|+++| |+|||+..+ .+....+++...++........ ....
T Consensus 26 ~f~~~~~gl~~~~~g-~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~--~~~~ 102 (428)
T PF13347_consen 26 YFYTDVLGLSPALAG-LILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLS--FTAK 102 (428)
T ss_pred HHHHHHcCCCHHHHH-HHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhh--hhhH
Confidence 334445577554333 3344445557777889999999 899988764 5555555555444321010000 0011
Q ss_pred hhHHHHHHHHHHHHHHhcCcccccceeecccCCc-ccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCC-----c--hhH
Q 021808 182 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPE-QYRGICGGMSATVNWISNLIVAQTFLTVAELVGT-----G--ATF 253 (307)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt-~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~ 253 (307)
..+ ..+...++...+..... ...++.+|+.+. +.|....+.....+.+|..+.....+......+. + ...
T Consensus 103 ~~~-~~~~~~l~~~~~t~~~i-~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~ 180 (428)
T PF13347_consen 103 LVW-LFVFYILFDIAYTFVQI-PYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMA 180 (428)
T ss_pred HHH-HHHHHHHHHHhhhhccC-chhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHH
Confidence 112 12222333333332222 224788999985 5798888888777777776555444444433331 1 122
Q ss_pred HHHHHHHHHHHHHHHhhccC
Q 021808 254 LILAGIAVLAVVFVILFVPE 273 (307)
Q Consensus 254 ~~~~~~~~~~~~~~~~~lpe 273 (307)
.+.+.+..++.++..+..+|
T Consensus 181 ~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 181 LVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHHHhhhhhheeee
Confidence 34444444555555566677
No 187
>PRK09669 putative symporter YagG; Provisional
Probab=98.19 E-value=0.0001 Score=66.85 Aligned_cols=104 Identities=15% Similarity=0.218 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccc
Q 021808 127 AVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPW 206 (307)
Q Consensus 127 ~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (307)
...+..+++.++.++++||+|||+.+..+....+++.+.+.. .. .. . .+...+...+ ......+..+..+
T Consensus 272 ~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~--~~--~~---~--~~~~~~~~~i-~g~~~~~~~~~~~ 341 (444)
T PRK09669 272 TGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFF--IP--PS---N--VWLIFALNIL-FNFIQNLTTPLQW 341 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH--hC--cc---h--HHHHHHHHHH-HHHHHHHHHHHHH
Confidence 334446678888999999999999887665443332222211 11 11 1 1111222222 2222223446667
Q ss_pred eeecccCCc-------ccchhhhhHHHHHHHHHHHHHHHhh
Q 021808 207 TLNSEVYPE-------QYRGICGGMSATVNWISNLIVAQTF 240 (307)
Q Consensus 207 ~~~~ElfPt-------~~R~~~~g~~~~~~~~~~~~~~~~~ 240 (307)
++.+|..+. +..+...|.......++..+++...
T Consensus 342 am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~ 382 (444)
T PRK09669 342 SMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVV 382 (444)
T ss_pred HHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 888888762 2223344554444455555544433
No 188
>PRK10054 putative transporter; Provisional
Probab=98.18 E-value=3.7e-05 Score=68.56 Aligned_cols=110 Identities=11% Similarity=0.078 Sum_probs=59.9
Q ss_pred HHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccC
Q 021808 134 VGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVY 213 (307)
Q Consensus 134 ~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Elf 213 (307)
+.....+.+.||.++|+.+..+....++....+... . + .. +...+...++.... ....+....+..+..
T Consensus 259 ~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~-~-----~~--~~~~~~~~~~~~g~-~~~~p~~~~~~~~~~ 327 (395)
T PRK10054 259 SLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFS--G-N-----SL--LLWGMSAAVFTVGE-IIYAPGEYMLIDHIA 327 (395)
T ss_pred eehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHc--c-h-----HH--HHHHHHHHHHHHHH-HHHHhhHHHHHHHhC
Confidence 445677899999999998776654444443332211 0 0 00 11122222222221 122334446678899
Q ss_pred CcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHH
Q 021808 214 PEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLI 255 (307)
Q Consensus 214 Pt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (307)
|++.|+++.|.. +.+++|..+++.....+.+..+....+.+
T Consensus 328 p~~~~~~~~~~~-~~~~~G~~~Gp~~~G~l~~~~g~~~~~~~ 368 (395)
T PRK10054 328 PPGMKASYFSAQ-SLGWLGAAINPLVSGVILTTLPPWSLFVI 368 (395)
T ss_pred CcccceehHhHH-HHHHHHHHHHHHHHHHHHHHcChhhHHHH
Confidence 999999887753 35556777776666556665553333333
No 189
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.17 E-value=9.3e-06 Score=74.33 Aligned_cols=182 Identities=19% Similarity=0.284 Sum_probs=104.9
Q ss_pred hhhhcchhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHH
Q 021808 72 LDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKL 151 (307)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~ 151 (307)
.++++++.+.. ..........++.....|+|.+..+.+.++++.+...++ ..+..+++-++.|+++|+-..|+.
T Consensus 292 ~~ll~~~~fl~-----~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Si-igi~~i~gRi~~G~laD~~~~~~~ 365 (509)
T KOG2504|consen 292 LSLLKDPKFLL-----LALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSI-IGVSDIIGRIILGLLADKPGIRAL 365 (509)
T ss_pred HHHHcCchHHH-----HHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHH-HHHhhhhhhhhhhhhcCccccchH
Confidence 35566544322 222333344566777788888989999988776655554 445589999999999999985443
Q ss_pred H--HHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHH
Q 021808 152 A--LSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVN 229 (307)
Q Consensus 152 l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~ 229 (307)
. .++.++++++.. .+.... + ...++..+++.++......+.....+.|+.+.+.=..+.|+....+
T Consensus 366 ~~~~~~ll~~gl~~~--~~p~~~--~--------~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~ 433 (509)
T KOG2504|consen 366 VLFLLTLLIAGLARL--FLPFAT--T--------YVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQ 433 (509)
T ss_pred HHHHHHHHHHHHHHH--HHHHhc--c--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHh
Confidence 3 344444444331 111111 0 1122223333333333334444457789999998888999998888
Q ss_pred HHHHHHHHHhhHHHHHHhCC-chhHHHHHHHHHHHHHHHHhhcc
Q 021808 230 WISNLIVAQTFLTVAELVGT-GATFLILAGIAVLAVVFVILFVP 272 (307)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~lp 272 (307)
.++++.++++...+.+..+. ...+...+...+++.+ +++..|
T Consensus 434 gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~-~~~~~~ 476 (509)
T KOG2504|consen 434 GIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAV-LLLILR 476 (509)
T ss_pred HHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHH-HHHHhH
Confidence 88888776655444444442 2234444444444443 334444
No 190
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.15 E-value=0.00017 Score=65.43 Aligned_cols=151 Identities=17% Similarity=0.105 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCc-hHHHHHhHHHHHHHHHHHHHHHhhcC---C--------CCCCCchhHHHHHHHH
Q 021808 124 LSLAVAGTNAVGTIVGIYLIDHFGR-KKLALSSLAGVIISLVLLSWAFISGS---S--------ASSSGVYGWIAVIGLA 191 (307)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~l~Dr~Gr-R~~l~~~~~~~~~~~~~~~~~~~~~~---~--------~~~~~~~~~~~~~~~~ 191 (307)
......+...+.+++--.+.+|+|+ |+....+.++.++++....+.-...+ . ...... .+..+....
T Consensus 310 ~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~ 388 (477)
T TIGR01301 310 GLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGI-KASALIVFA 388 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhh-HHHHHHHHH
Confidence 3344444445555666788999995 56657776666666655543221100 0 000000 011222222
Q ss_pred HHHHHHhcCcccccceeecccCCcccc--hhhhhHHHHHHHHHHHHHHHhhHHHHHHhC--CchhHHHHHHHHHHHHHHH
Q 021808 192 LYIAFFAPGMGPVPWTLNSEVYPEQYR--GICGGMSATVNWISNLIVAQTFLTVAELVG--TGATFLILAGIAVLAVVFV 267 (307)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~ElfPt~~R--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 267 (307)
++ +..-.....++|++.++.-|.+.| |...|+.+..-.+..++.+..........+ ....+.+.+..++++++.+
T Consensus 389 ~~-Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~ 467 (477)
T TIGR01301 389 IL-GIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLA 467 (477)
T ss_pred Hh-hHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHH
Confidence 22 222223456788888999886656 566676666555555544433333344444 2334556666677778888
Q ss_pred HhhccCCCC
Q 021808 268 ILFVPETQG 276 (307)
Q Consensus 268 ~~~lpet~~ 276 (307)
.+.+|.++.
T Consensus 468 ~~~~~~~~~ 476 (477)
T TIGR01301 468 LILLPRPRV 476 (477)
T ss_pred HHhCCCCCC
Confidence 888998764
No 191
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.14 E-value=4.4e-05 Score=68.01 Aligned_cols=168 Identities=19% Similarity=0.124 Sum_probs=93.8
Q ss_pred HHHHHHhhcCchhhHHhhHHH-HHHcC----CCChHHHHHHHHHHHHHHHHHHHHHHHhhccc-CchHHHHHhHHHHHHH
Q 021808 89 GLQAFQQFTGINTVMYYSPTI-VQMAG----FQSNQLALLLSLAVAGTNAVGTIVGIYLIDHF-GRKKLALSSLAGVIIS 162 (307)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~-~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~-GrR~~l~~~~~~~~~~ 162 (307)
..-++..+ ++|.+.--+..+ ....+ .++++.....+.....+ =...+++||++||+ |+|+.++.+.++.++.
T Consensus 28 ~vE~WERF-syYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slV-Y~t~i~GG~laDr~LG~~~tI~lGail~~iG 105 (498)
T COG3104 28 FVELWERF-SYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLV-YLTPIIGGWLADRVLGTRRTIVLGAILMAIG 105 (498)
T ss_pred HHHHHHHH-hhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHH-HHHHHHHHHHHHHhcchhHHHHHHHHHHHHH
Confidence 34444444 344444333333 23334 66655444444444443 35678999999995 9999998888877777
Q ss_pred HHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCccc--chhhhhHHHHHHHHHHHHHHHhh
Q 021808 163 LVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQY--RGICGGMSATVNWISNLIVAQTF 240 (307)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~--R~~~~g~~~~~~~~~~~~~~~~~ 240 (307)
.+.++..- ..... . ..+++.+.. ....+.=+-...+.+|++|.+- |-.+.++.+...++|+++.+.+.
T Consensus 106 h~~L~~~~----~~~~~----g-l~i~L~~I~-iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~ 175 (498)
T COG3104 106 HLVLAISS----VSGPG----G-LYIGLALII-VGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIIT 175 (498)
T ss_pred HHHHhccc----ccccc----H-HHHHHHHHH-hccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHH
Confidence 66654321 00111 1 122222211 2222233344467789987654 33345555555567888887777
Q ss_pred HHHHHHhCCchhHHHHHHHHHHHHHHHH
Q 021808 241 LTVAELVGTGATFLILAGIAVLAVVFVI 268 (307)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (307)
+.+....+.+..|...+.-+..+.+..+
T Consensus 176 ~~~~~~~g~~~gF~~aavGm~~gl~~f~ 203 (498)
T COG3104 176 GLLAINYGWHVGFGLAAVGMIIGLVIFL 203 (498)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHHHH
Confidence 7777777766667666666666655443
No 192
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.12 E-value=3.7e-05 Score=69.59 Aligned_cols=76 Identities=22% Similarity=0.316 Sum_probs=53.3
Q ss_pred cccchhhhhcchhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 021808 67 KTVRYLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH 145 (307)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr 145 (307)
++.+++++++++..+...+. .+....+.+....|.|+++.+ .+++.++..+...++.. .+.+..+++|+++||
T Consensus 247 ~~vP~~~i~ts~~vwai~~~-----~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l-~~~~~k~~~g~lsD~ 320 (466)
T KOG2532|consen 247 PPVPYKAILTSPPVWAIWIS-----AFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFL-AMAIVKFVAGQLSDR 320 (466)
T ss_pred CCCCHHHHHcCHHHHHHHHH-----HHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 46789999998876644332 233344566777889998874 56666665665555554 478899999999999
Q ss_pred cCc
Q 021808 146 FGR 148 (307)
Q Consensus 146 ~Gr 148 (307)
+-+
T Consensus 321 l~~ 323 (466)
T KOG2532|consen 321 LTF 323 (466)
T ss_pred Hhh
Confidence 866
No 193
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.12 E-value=0.00015 Score=66.33 Aligned_cols=127 Identities=13% Similarity=0.112 Sum_probs=63.4
Q ss_pred HHhhHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHHHHHHhhc----ccCchHH-HHHhHHHHHHHHHHHHHHHhhcCCC
Q 021808 103 MYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLID----HFGRKKL-ALSSLAGVIISLVLLSWAFISGSSA 176 (307)
Q Consensus 103 ~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~D----r~GrR~~-l~~~~~~~~~~~~~~~~~~~~~~~~ 176 (307)
..|++.++++ .|.+....+ .+....-+...+..++.|+++| |+|||+. ++.+...++++...++. ....+
T Consensus 26 ~~~l~~yyt~v~Gls~~~vg-~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~---~p~~~ 101 (473)
T PRK10429 26 YMYLMYYYTDVVGLSVGLVG-TLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFS---AHLFE 101 (473)
T ss_pred HHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHc---CCCCC
Confidence 3455555554 477654433 3344455567788999999999 5699655 44555554444333321 11100
Q ss_pred CCCCchhHHHHHHHHHHHHHHhcCcccccceeecccC-CcccchhhhhHHHHHHHHHHHHH
Q 021808 177 SSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVY-PEQYRGICGGMSATVNWISNLIV 236 (307)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Elf-Pt~~R~~~~g~~~~~~~~~~~~~ 236 (307)
......+ ..+...++..++... .....++.+|+- +.+.|.+..+.-...+.+++.+.
T Consensus 102 -~~~~~~~-~~~~~~l~~~~~t~~-~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~ 159 (473)
T PRK10429 102 -GTAQYVF-VCVTYILWGMTYTIM-DIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVT 159 (473)
T ss_pred -ccHHHHH-HHHHHHHHHHHHHHH-cchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001111 111112222222211 222236778988 57889877776545455554443
No 194
>PRK10133 L-fucose transporter; Provisional
Probab=98.11 E-value=0.00015 Score=65.55 Aligned_cols=129 Identities=17% Similarity=0.205 Sum_probs=66.9
Q ss_pred HhhHHH-HH-HcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCc
Q 021808 104 YYSPTI-VQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGV 181 (307)
Q Consensus 104 ~~~~~~-~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (307)
.|.+.+ .+ ..|.+...... ......+..+++.++++++.||+|||+++..+....++...... ... . .
T Consensus 279 ~~~~~~l~~~~~g~s~~~ag~-~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~---~~~-~--~--- 348 (438)
T PRK10133 279 SYLIRYAVEEIPGMTAGFAAN-YLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISA---FAG-G--H--- 348 (438)
T ss_pred HHHHHHHhhhcCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH---HcC-C--h---
Confidence 344544 44 34666554443 34444555788999999999999999988766544433322221 111 1 0
Q ss_pred hhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhC
Q 021808 182 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 248 (307)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (307)
. .+..+.+. +.......|..+....|.+|.+ -+++.++.. ....++.+++.....+.+..+
T Consensus 349 ~---~~~~~~l~-glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g 409 (438)
T PRK10133 349 V---GLIALTLC-SAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDAAG 409 (438)
T ss_pred H---HHHHHHHH-HHHHHHHHHHHHHHHHcccchh-hccchhHHh-HHhccchHHHHHHHHHHHhcc
Confidence 0 11111121 2222334556667777888875 344566554 333444444443333344333
No 195
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.11 E-value=0.00015 Score=62.53 Aligned_cols=133 Identities=13% Similarity=0.161 Sum_probs=71.9
Q ss_pred hhHHhhHHHHHH---cCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCC
Q 021808 101 TVMYYSPTIVQM---AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSAS 177 (307)
Q Consensus 101 ~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (307)
.+..|.+.++.+ .|.+..+.+.. .....+...+|..++++++||+|+|+++..+..++++..+... .. . .
T Consensus 158 ~~~~w~~~yl~~~~~~g~s~~~a~~~-~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~---~~-~-~- 230 (310)
T TIGR01272 158 SAGSFLVNFLSDPHALGLPEDQAAHF-TAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAA---LT-H-G- 230 (310)
T ss_pred HHHHHHHHHHHhcccCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH---Hc-C-C-
Confidence 444567777754 36655554444 4444455788999999999999999987665554444432221 11 1 0
Q ss_pred CCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCC
Q 021808 178 SSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGT 249 (307)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (307)
.....+..++ ++......|.......+.+|.+. ++++++. ..+.+|+.+.+.....+.+..+.
T Consensus 231 ------~~~~~~~~l~-g~~~s~i~P~~~s~a~~~~~~~~-~~asai~-~~~~~Gg~i~P~l~G~lad~~g~ 293 (310)
T TIGR01272 231 ------YVAMWFVLAL-GLFNSIMFPTIFSLALNALGRHT-SQGSGIL-CLAIVGGAIVPLLQGSLADCLGI 293 (310)
T ss_pred ------HHHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhhh-hhhHHHH-HHHHhcchHHHHHHHHHHHhccc
Confidence 0011122222 22233345555566678788753 3455553 45555555555444444454443
No 196
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.10 E-value=9.3e-05 Score=75.06 Aligned_cols=137 Identities=14% Similarity=-0.038 Sum_probs=72.2
Q ss_pred HhhHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCC---
Q 021808 104 YYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSS--- 179 (307)
Q Consensus 104 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 179 (307)
.+.|.+.+. .|.+....+... ....+..+++.++.++++|+.++++.+..+..+.+++.+.+.+...........
T Consensus 246 ~~~p~~~~~~~g~~~~~~g~~~-~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 324 (1140)
T PRK06814 246 SQLPLLAKETLGGDENVATLFL-AVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKS 324 (1140)
T ss_pred HHhHHHHHHHcCCchHHHHHHH-HHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccc
Confidence 456666654 566555444433 334445688999999999888777655444443333333222210000000000
Q ss_pred ------CchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHH
Q 021808 180 ------GVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLT 242 (307)
Q Consensus 180 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~ 242 (307)
....+...++..++.. ......+...++..+..|.+.|+++.|+....+.++..+++.....
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~ 392 (1140)
T PRK06814 325 ILVFLSKRHGWRILIDLFGLAA-AGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILAL 392 (1140)
T ss_pred hhhhhcccccHHHHHHHHHHHH-HHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHH
Confidence 0001222222222222 2222233345777899999999999999888887777666554433
No 197
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.09 E-value=0.0012 Score=59.27 Aligned_cols=73 Identities=19% Similarity=0.238 Sum_probs=35.3
Q ss_pred hhhhcchhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHHc-CCCChHHHHHHHHHHHHHHHHHHHHHHHhh-cccCch
Q 021808 72 LDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMA-GFQSNQLALLLSLAVAGTNAVGTIVGIYLI-DHFGRK 149 (307)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-Dr~GrR 149 (307)
.++++++..+...+... + ..........+.|.++++. |.+..... +......+..+++..+.+.+. |+.++|
T Consensus 212 ~~ll~~~~~~~~~l~~~-~----~~~~~~~~~~~~P~~l~~~~g~s~~~~g-l~~~~~~~~~~i~~~l~~~~~~~~~~~~ 285 (413)
T PRK15403 212 RNVFRNRLFLTGAATLS-L----SYIPMMSWVAVSPVILIDAGGMTTSQFA-WTQVPVFGAVIVANAIVARFVKDPTEPR 285 (413)
T ss_pred HHHHcCHHHHHHHHHHH-H----HHHHHHHHHHhChHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhccCCchh
Confidence 35566666654333211 1 1122233344567777665 55544333 333334444566666666655 555544
Q ss_pred H
Q 021808 150 K 150 (307)
Q Consensus 150 ~ 150 (307)
.
T Consensus 286 ~ 286 (413)
T PRK15403 286 F 286 (413)
T ss_pred H
Confidence 3
No 198
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.07 E-value=9.4e-05 Score=66.20 Aligned_cols=115 Identities=20% Similarity=0.198 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcC
Q 021808 121 ALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPG 200 (307)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (307)
+...........+++.++...+.+|+|+|+++.++.+..++..+.+.+.. .+ . .++.++.. +........
T Consensus 274 ~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~--~~-----~--~~l~~~~~-~i~~~g~~~ 343 (467)
T COG2211 274 AYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP--AG-----S--VVLIVVAL-IIAGVGTGI 343 (467)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhc--Cc-----c--hHHHHHHH-HHHHHHhhc
Confidence 33444444444556688999999999999999988777666666554331 10 0 12222222 222333445
Q ss_pred cccccceeecccC-----Ccccchhh--hhHHHHHHHHHHHHHHHhhHHHHH
Q 021808 201 MGPVPWTLNSEVY-----PEQYRGIC--GGMSATVNWISNLIVAQTFLTVAE 245 (307)
Q Consensus 201 ~~~~~~~~~~Elf-----Pt~~R~~~--~g~~~~~~~~~~~~~~~~~~~~~~ 245 (307)
.+++.|++.+|.- -|..|..+ .|......-.+..++.........
T Consensus 344 ~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~ 395 (467)
T COG2211 344 ANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILG 395 (467)
T ss_pred cccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5778889888874 46666332 233333344455454444433333
No 199
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.07 E-value=0.00037 Score=63.50 Aligned_cols=144 Identities=18% Similarity=0.187 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhH-HHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCc
Q 021808 123 LLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSL-AGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGM 201 (307)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (307)
+...+...+..+..++.|-++|+-|+||.++..+ ..++++...+.+. . ... . +...+...+...++...
T Consensus 74 ~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v--~--~~~---~--~~~~~l~iia~v~~~~~- 143 (477)
T PF11700_consen 74 YANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFV--S--PGQ---W--WLALVLFIIANVGYEAS- 143 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHh--C--cch---H--HHHHHHHHHHHHHHHHH-
Confidence 3344455556677888899999999998775443 3333333333221 1 111 1 11222222212222111
Q ss_pred ccccceeecccCCcccc--------------------------hhhhhHHHHHHHHHHHHHHHhhHHHHHHhC-C-----
Q 021808 202 GPVPWTLNSEVYPEQYR--------------------------GICGGMSATVNWISNLIVAQTFLTVAELVG-T----- 249 (307)
Q Consensus 202 ~~~~~~~~~ElfPt~~R--------------------------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~----- 249 (307)
.....++++|+-+.+.+ ++.+|.+.+.|.+|+++.-..........+ .
T Consensus 144 ~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~ 223 (477)
T PF11700_consen 144 NVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTW 223 (477)
T ss_pred HHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccch
Confidence 11224788999988888 889999999998888764333222221111 1
Q ss_pred --chhHHHHHHHHHHHHHHHHhhccCCCC
Q 021808 250 --GATFLILAGIAVLAVVFVILFVPETQG 276 (307)
Q Consensus 250 --~~~~~~~~~~~~~~~~~~~~~lpet~~ 276 (307)
...+.+.+..-++..+...+++||.++
T Consensus 224 ~~r~~~~~~a~ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 224 AIRVAFLIVALWWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 122334444444444555677888765
No 200
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.07 E-value=7.7e-05 Score=67.88 Aligned_cols=142 Identities=20% Similarity=0.164 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcc
Q 021808 123 LLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMG 202 (307)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (307)
.......+..+++.+.++++.||++-.+.+....+...+..++-.+ ..+ .-.++++-++.+.+..+..
T Consensus 85 ~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~---~~s---------~~~~ialr~llGl~es~~w 152 (495)
T KOG2533|consen 85 VLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAA---VHS---------FPGLIALRFLLGLFESGGW 152 (495)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH---Hhh---------hHHHHHHHHHHHHHhcccc
Confidence 3344455568899999999999999555443322222222111111 111 1123333344455555556
Q ss_pred cccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHH------HhCCchhHHHHHHHHHHHHHHHHhhccCCCC
Q 021808 203 PVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAE------LVGTGATFLILAGIAVLAVVFVILFVPETQG 276 (307)
Q Consensus 203 ~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~ 276 (307)
|....+++-.|..+.|++-.|+-.+.+.+|+++++.+-..+.. ..++.+.|++-++++++..+++++++|+...
T Consensus 153 P~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 153 PGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred hHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 6666888999999999999999988888888888776555432 3356678888888888888888888887554
No 201
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.02 E-value=0.00089 Score=57.61 Aligned_cols=56 Identities=25% Similarity=0.250 Sum_probs=37.9
Q ss_pred HHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHH
Q 021808 108 TIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLV 164 (307)
Q Consensus 108 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~ 164 (307)
.++++.|+...+.+..... ..+.+.+...+.|.++||+|||+..+..++.-.++++
T Consensus 59 ~LY~~yg~~~~qIa~Lf~~-Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl 114 (354)
T PF05631_consen 59 ALYESYGFSEHQIAILFVA-GFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL 114 (354)
T ss_pred HHHHHcCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 4557788877665544333 3334567778889999999999987766555544443
No 202
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.02 E-value=8.9e-05 Score=67.66 Aligned_cols=132 Identities=8% Similarity=-0.091 Sum_probs=74.5
Q ss_pred HcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcC--CCCCCCchhHHHHHH
Q 021808 112 MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGS--SASSSGVYGWIAVIG 189 (307)
Q Consensus 112 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 189 (307)
..|.+......... ...+..+++..+.+.+.+|++.|+++..+.+..+++.+.........+ ...... +.....
T Consensus 282 ~lG~s~~~~G~~~~-~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~---~~~~~~ 357 (468)
T TIGR00788 282 CLPGGPSFSGMSKV-VGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDE---VFVLGD 357 (468)
T ss_pred cCCCCcchhhhHHH-HHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCe---eeeeeh
Confidence 45665555443333 344567888888899999999999988776655554433211110100 000001 111111
Q ss_pred HHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhC
Q 021808 190 LALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 248 (307)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (307)
..+..........+. ..++.++.|.+.+++..++..+...++..+++..-..+.+..+
T Consensus 358 ~~l~~~~~g~~~~~~-~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 358 SIIAEVLAQLKFMPF-LVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred hHHHHHHHHHHHccH-HHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 111112222222233 4678899999999999999999888888777654444444444
No 203
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.00 E-value=0.00027 Score=63.39 Aligned_cols=128 Identities=12% Similarity=0.014 Sum_probs=68.5
Q ss_pred HHhhHHHHHHcCCC-ChHH-HHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCC
Q 021808 103 MYYSPTIVQMAGFQ-SNQL-ALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 180 (307)
Q Consensus 103 ~~~~~~~~~~~g~~-~~~~-~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (307)
..|.+.+.+..+.. +.+. ....... .....+|-++++++.||+++|+++.+...+++++.+.... . .+
T Consensus 252 ~s~l~~y~~~~~~~~~~~~a~~~~~~~-~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~--~---~~---- 321 (410)
T TIGR00885 252 WTFIIQYAVRLIPGMTAGFAANYNIGA-MVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIF--A---GG---- 321 (410)
T ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH--c---CC----
Confidence 34566665543322 2222 2223333 3456789999999999999999887666555555444322 1 11
Q ss_pred chhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHH
Q 021808 181 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAEL 246 (307)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 246 (307)
......+.+.. .+..++.|..+....+..+.+.+..+.++.. ..+|+.+.+.....+.+.
T Consensus 322 ---~~~~~~l~~~g-lf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~--~~~Gga~~p~l~G~~~d~ 381 (410)
T TIGR00885 322 ---HVGLYCLTLCS-AFMSLMFPTIYGIALKGLGQDTKYGAAGLVM--AIIGGGIVPPLQGFIIDM 381 (410)
T ss_pred ---hHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHH--HHhccchHHHHHHHHHHH
Confidence 01122222222 2223344677778889999887644444433 335555555554445553
No 204
>PRK11462 putative transporter; Provisional
Probab=97.99 E-value=0.00056 Score=62.37 Aligned_cols=31 Identities=13% Similarity=0.029 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHhhcccCchHHHHHhH
Q 021808 126 LAVAGTNAVGTIVGIYLIDHFGRKKLALSSL 156 (307)
Q Consensus 126 ~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~ 156 (307)
....+..+++.+++++++||+|+|+.+..+.
T Consensus 270 ~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~ 300 (460)
T PRK11462 270 TTYCVGNLIGSALAKPLTDWKCKVTIFWWTN 300 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhChHHHHHHHH
Confidence 3344456778899999999999998876443
No 205
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.95 E-value=4.6e-05 Score=65.39 Aligned_cols=150 Identities=21% Similarity=0.136 Sum_probs=77.0
Q ss_pred HHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHH
Q 021808 111 QMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGL 190 (307)
Q Consensus 111 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (307)
...|.+..+.++... .......+++...|.++|++|||+...+.....++..+.- ..+++ +.++ ++.-
T Consensus 106 ~~w~~s~~q~~llt~-~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is------~~spn----f~~L-~~f~ 173 (528)
T KOG0253|consen 106 EVWGPSEGQAPLLTL-SVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVIS------GASPN----FASL-CVFR 173 (528)
T ss_pred hhhchhhhhhhHHHH-HHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhh------cCCCC----eehh-hHHH
Confidence 344544444444333 3333357888889999999999998766554443332221 11111 1111 1111
Q ss_pred HHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Q 021808 191 ALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILF 270 (307)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (307)
++. .++.|..|+..++-.|.-|+..|...+=+. +.-.+|.+.............++.+..+... +.+.......++
T Consensus 174 ~l~--~~g~gg~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~-~pl~~~a~f~~w 249 (528)
T KOG0253|consen 174 ALW--GFGVGGLPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSS-TPLMFAARFLVW 249 (528)
T ss_pred HHH--hccCCCccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH-hHHHHHHHHHhh
Confidence 121 222223555556668999999998765444 4444555554444434444445443333333 333233334578
Q ss_pred ccCCCC
Q 021808 271 VPETQG 276 (307)
Q Consensus 271 lpet~~ 276 (307)
+||+.+
T Consensus 250 ~~ESpR 255 (528)
T KOG0253|consen 250 VYESPR 255 (528)
T ss_pred cccCcc
Confidence 899843
No 206
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.92 E-value=0.00031 Score=58.33 Aligned_cols=118 Identities=19% Similarity=0.211 Sum_probs=66.6
Q ss_pred hHHHH-HHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHH-HHHHHHHHHHHhhcCCCCCCCchh
Q 021808 106 SPTIV-QMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGV-IISLVLLSWAFISGSSASSSGVYG 183 (307)
Q Consensus 106 ~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 183 (307)
.|.++ +..|.++.......+.+.. ++.+.+++.|.++||+||+...+.+..+. ...-..++ +...+ + +.
T Consensus 287 g~~fF~~rfGlS~~~a~~i~s~vy~-Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~--Ft~ls-P-----y~ 357 (459)
T KOG4686|consen 287 GPMFFQKRFGLSAVSAGNILSTVYG-ISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLF--FTFLS-P-----YT 357 (459)
T ss_pred hHHHHHHhhCCChhhccchhhhhhh-hhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHH--hhhcc-H-----HH
Confidence 34444 4678876554444454444 47888999999999999997765432221 11111111 11111 1 11
Q ss_pred HHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHH
Q 021808 184 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQ 238 (307)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~ 238 (307)
.+++.+ +-....+. ..|-..+.+.|.+.-+++.|..+++.+.+-.+.+.
T Consensus 358 ~m~~lG--LsysllAc----slWP~va~~vpE~qLGTaygf~qsIqNLgla~i~I 406 (459)
T KOG4686|consen 358 SMTFLG--LSYSLLAC----SLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPI 406 (459)
T ss_pred HHHHHh--hhHHHHHH----HHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhh
Confidence 222222 21111121 23455678889999999999999998877655443
No 207
>PRK09848 glucuronide transporter; Provisional
Probab=97.88 E-value=0.00091 Score=60.72 Aligned_cols=55 Identities=16% Similarity=0.133 Sum_probs=34.1
Q ss_pred hhHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHHHHHHhhccc----CchHHH-HHhHHHHH
Q 021808 105 YSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHF----GRKKLA-LSSLAGVI 160 (307)
Q Consensus 105 ~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~----GrR~~l-~~~~~~~~ 160 (307)
|.+.++++ .|.+.... -.......+...+..++.|+++||. |||+.. ..+.....
T Consensus 30 ~l~~y~~~~~gl~~~~~-g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~ 90 (448)
T PRK09848 30 FLLSYYTDVAGVGAAAA-GTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLM 90 (448)
T ss_pred HHHHHHHHHcCCCHHHH-HHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHH
Confidence 34444444 47755443 3444455556788999999999996 777755 44443333
No 208
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.86 E-value=0.00069 Score=61.29 Aligned_cols=135 Identities=21% Similarity=0.299 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHH-HHHHHHHHHHHhcCcccccceee
Q 021808 131 TNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIA-VIGLALYIAFFAPGMGPVPWTLN 209 (307)
Q Consensus 131 ~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 209 (307)
..++.++..|-++||+|||..+......+.+-.+...+.. .|.. +.+.. +.+ ....+...++.
T Consensus 74 ~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~------------~~~~~~~~l~---g~~-~~~~s~~~a~v 137 (463)
T KOG2816|consen 74 LTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG------------YWFFLLLGLS---GGF-SAIFSVGFAYV 137 (463)
T ss_pred HHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH------------HHHhhhcccc---cch-hhhhhhhhhhe
Confidence 4567888999999999999998776655544443332211 0111 11110 011 11123344678
Q ss_pred cccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCCCCCHHH
Q 021808 210 SEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILFVPETQGLTFLE 281 (307)
Q Consensus 210 ~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l~e 281 (307)
++.-..+.|....|+....-+.+..+++..-.......+....+.+.....++..+++.+++||+..++.++
T Consensus 138 adis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~ 209 (463)
T KOG2816|consen 138 ADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERS 209 (463)
T ss_pred eeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccc
Confidence 899999999888777665333333333322222333344444566666667777777888899998776654
No 209
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.78 E-value=0.0011 Score=59.59 Aligned_cols=141 Identities=21% Similarity=0.207 Sum_probs=76.1
Q ss_pred hhHHhhHHHHHHc-CCCChHHHHHHHHHHHHHHHHHHHHHHHhhcc----cCchHHH-HHhHHHHHHHHHHHHHHHhhcC
Q 021808 101 TVMYYSPTIVQMA-GFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH----FGRKKLA-LSSLAGVIISLVLLSWAFISGS 174 (307)
Q Consensus 101 ~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr----~GrR~~l-~~~~~~~~~~~~~~~~~~~~~~ 174 (307)
.+..|+.++++.. |.+.. .+-.+-.+.=++..+.-|+.|.++|| +|||+.. +++.+..++...+.++.. ..
T Consensus 30 ~~~~yLl~fYTdv~Gis~~-~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p--~~ 106 (467)
T COG2211 30 IVVLYLLFFYTDVFGLSAA-LAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITP--DF 106 (467)
T ss_pred HHHHHHHHHHhcccCCcHH-HHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCC--Cc
Confidence 4445666666644 55433 22223333334566788999999996 6777665 444444444444333211 11
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCC-cccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhC
Q 021808 175 SASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYP-EQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 248 (307)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP-t~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (307)
+......+..+..+...+.....+ -|. .++.+|+-+ .+.|.+..+.-...+.++..+....++.+....+
T Consensus 107 ~~~~k~~ya~vtY~l~~l~YT~vn---iPy-~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g 177 (467)
T COG2211 107 SMTGKLIYALVTYMLLGLGYTLVN---IPY-GALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFG 177 (467)
T ss_pred ccCcchHHHHHHHHHHHHHHHhee---Cch-hhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 111122333333333332222222 222 256677753 3458888888888888888887777766666554
No 210
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.71 E-value=0.0013 Score=57.39 Aligned_cols=159 Identities=18% Similarity=0.168 Sum_probs=88.3
Q ss_pred chhhhhcchhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 021808 70 RYLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGR 148 (307)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~Gr 148 (307)
...+++++|+.+...+..+ .+...-..+..|++.++.+ .|.+. +.+........+...+|-.++..+..|+..
T Consensus 228 ~~~~l~~~~~~~~gvl~~F-----lYVG~Eva~gsfl~~y~~~~~g~~~-~~aa~~~s~~~~~~~vGRFig~~lm~~~~~ 301 (422)
T COG0738 228 GLSSLFQNKHLRLGVLAIF-----LYVGAEVAIGSFLVSYLEELLGLNE-QQAAYYLSFFWVGFMVGRFIGSALMSRIKP 301 (422)
T ss_pred hHHHHHhChHHHHHHHHHH-----HHHhHHHHHHHHHHHHHHhcCCccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 3567788877766544322 2122223445677777777 44444 444445555556678898888888889999
Q ss_pred hHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHH
Q 021808 149 KKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATV 228 (307)
Q Consensus 149 R~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~ 228 (307)
.+.+.....+..+.++..... . + .+.+.++. ..+.+...+.|..+....+..|.+.- ..|...+.
T Consensus 302 ~k~Laf~a~~~ill~~~~~l~--~-g---------~v~~~~l~-~ig~F~simfPTIfslal~~l~~~ts--~~s~~l~m 366 (422)
T COG0738 302 EKYLAFYALIAILLLLAVALI--G-G---------VVALYALF-LIGLFNSIMFPTIFSLALKNLGEHTS--VGSGLLVM 366 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHh--c-C---------hHHHHHHH-HHHHHhHHHHHHHHHHHHhccCcccc--ccceeeee
Confidence 888876554433333332211 1 0 11222222 23344455667777777888884433 33333455
Q ss_pred HHHHHHHHHHhhHHHHHHhCC
Q 021808 229 NWISNLIVAQTFLTVAELVGT 249 (307)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~ 249 (307)
+.+|+.+.+.......+..+.
T Consensus 367 aivGGAiiP~l~G~i~d~~g~ 387 (422)
T COG0738 367 AIVGGAIIPPLQGVIADMFGI 387 (422)
T ss_pred heecchHHHHHHHHHHHhhhh
Confidence 555655656555555555553
No 211
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.69 E-value=0.0015 Score=57.78 Aligned_cols=139 Identities=13% Similarity=0.049 Sum_probs=81.3
Q ss_pred hcCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCC
Q 021808 96 FTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSS 175 (307)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~ 175 (307)
+..+..+..|...++. +.+.+.+.+.+.+.++++.+..+.|+.||.|-|..+..+....++.+.+=..... ..
T Consensus 61 WI~ya~i~n~~~~~Yg-----s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~--p~ 133 (480)
T KOG2563|consen 61 WIQYAPINNYVNSFYG-----SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSL--PF 133 (480)
T ss_pred heeehhHHHHHHHHhc-----chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccC--cc
Confidence 4444455544444432 3344678888888889999999999999999999988887776665543221111 10
Q ss_pred CCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHH
Q 021808 176 ASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTV 243 (307)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~ 243 (307)
-.+.... .++..+-.+.... ......++.=..+-.||++.|+++..++...+-+|..++...++.+
T Consensus 134 v~~~f~~-~l~~~Gq~iaa~A-q~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppil 199 (480)
T KOG2563|consen 134 VPPLFRR-PLTHTGQSIAAAA-QPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPIL 199 (480)
T ss_pred ccccchh-hhhHHhHHHHHHh-hhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcccee
Confidence 0011111 2333333222111 1111122223445569999999999888888777777665555443
No 212
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.67 E-value=0.001 Score=59.83 Aligned_cols=57 Identities=9% Similarity=0.015 Sum_probs=36.5
Q ss_pred HhhHHHH-HHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCc-hHHHHHhHHHHHH
Q 021808 104 YYSPTIV-QMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGR-KKLALSSLAGVII 161 (307)
Q Consensus 104 ~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~Gr-R~~l~~~~~~~~~ 161 (307)
.+++.++ +..|.+..+....... .....+++.++.|.++||+|| |+++..+.....+
T Consensus 23 ~~l~~~l~~~~g~s~~~iGl~~a~-~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~ 81 (418)
T TIGR00889 23 VTLGSYMSKTLHFSGAEIGWVYSS-TGIAAILMPILVGIIADKWLSAQKVYAVCHFAGAL 81 (418)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 3444444 4567776665554444 444578899999999999966 6666655444433
No 213
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.67 E-value=0.0051 Score=53.74 Aligned_cols=127 Identities=13% Similarity=0.046 Sum_probs=76.7
Q ss_pred HhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchh
Q 021808 104 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 183 (307)
Q Consensus 104 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (307)
.-.|.+.+..+.+..+ +....+...+...+.++.++++.||+|+|+-++.++.++++.+.++.-.-... .+
T Consensus 34 iLip~l~~~f~ls~~~-a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~-------~y- 104 (422)
T COG0738 34 ILIPHLKEVFDLTYFE-ASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSK-------SY- 104 (422)
T ss_pred hhHHHHHHHhCccHHH-HHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhh-------hH-
Confidence 3467777777775544 44555666666788889999999999999999999888888776653221110 11
Q ss_pred HHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhh
Q 021808 184 WIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTF 240 (307)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~ 240 (307)
.+.+.++.+...+.. ..-.....|++.+.|.+.-+.-.++.+.++.+|+++++...
T Consensus 105 ~~FL~~lFila~Gi~-~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g 160 (422)
T COG0738 105 GFFLVALFILASGIG-LLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLG 160 (422)
T ss_pred HHHHHHHHHHHhhhH-HHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHH
Confidence 112222222111111 01111224667777775444467888888888887665443
No 214
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.64 E-value=0.00042 Score=46.12 Aligned_cols=59 Identities=20% Similarity=0.372 Sum_probs=44.4
Q ss_pred hcCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHh
Q 021808 96 FTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSS 155 (307)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~ 155 (307)
+.+.....-|.+.++++.|.+..+.... ..+...+.+++.++.|.++||.||++..+..
T Consensus 13 f~~~g~~~Pfl~~~~~~~Gl~~~~iGil-~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~ 71 (77)
T PF12832_consen 13 FAALGCLYPFLPLYLKQLGLSPSQIGIL-SAIRPLIRFLAPPLWGFLADKFGKRKVILLG 71 (77)
T ss_pred HHHHHHHHhhhhHhhhhcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCccHHHHHH
Confidence 3445556677888888899987766544 4445556899999999999999999987543
No 215
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.53 E-value=0.0034 Score=56.07 Aligned_cols=62 Identities=19% Similarity=0.262 Sum_probs=41.7
Q ss_pred chhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCc-hHHHHHhHHHHHH
Q 021808 99 INTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGR-KKLALSSLAGVII 161 (307)
Q Consensus 99 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~Gr-R~~l~~~~~~~~~ 161 (307)
......|.+.+++..|.+..+.....++.. ...+++.++.|+++||.++ |+.+.+...+.++
T Consensus 18 ~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~-~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~ 80 (400)
T PF03825_consen 18 YGAFLPYLPLYLESRGFSGTQIGILLAVGP-LARIVSPPFWGAIADRFGSAKRILALLSLLSAL 80 (400)
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHH
Confidence 344445677889999987777665555444 4478889999999999865 5555444443333
No 216
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.53 E-value=0.012 Score=55.86 Aligned_cols=130 Identities=18% Similarity=0.196 Sum_probs=67.3
Q ss_pred HHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHH
Q 021808 110 VQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH-FGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVI 188 (307)
Q Consensus 110 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr-~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (307)
....+.++............. .-+..+++|+++|+ +||++.+.++.++..+...++..... ............+.
T Consensus 15 ~~~lg~~~~~A~~i~~~f~~l-~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~---~~~~~~~~~~~~l~ 90 (654)
T TIGR00926 15 LNFLGFSESTSTVLFHTFTYL-CYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAI---PSSGHPLHDLLDLL 90 (654)
T ss_pred HHHcCCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccC---cccccchHHHHHHH
Confidence 334566554433333333333 45667888999996 69999887766655554443332110 00000111112233
Q ss_pred HHHHHHHHHhcCcccccceeecccCCccc---chhhhhHHHHHHHHHHHHHHHhhHHHH
Q 021808 189 GLALYIAFFAPGMGPVPWTLNSEVYPEQY---RGICGGMSATVNWISNLIVAQTFLTVA 244 (307)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~ElfPt~~---R~~~~g~~~~~~~~~~~~~~~~~~~~~ 244 (307)
++.+...+ ..+.-+...+...+.|+.+. |.+...+.+...++|++++..+.+...
T Consensus 91 gLaLia~G-~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~ 148 (654)
T TIGR00926 91 GLALIALG-TGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILR 148 (654)
T ss_pred HHHHHHhh-ccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33332222 22333344466778887543 455666666677777777666555544
No 217
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.50 E-value=0.0048 Score=53.15 Aligned_cols=87 Identities=20% Similarity=0.127 Sum_probs=56.0
Q ss_pred hhhhcchhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCchH
Q 021808 72 LDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH-FGRKK 150 (307)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr-~GrR~ 150 (307)
.+++|++..|...+ .+..+-..+|.+..|+|.++.+.|.+..+.....++.. ..+++.++....+++| -++|+
T Consensus 202 ~~vw~~~~aW~vtL-----fmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~-l~~~~~~ll~P~la~R~~n~r~ 275 (395)
T COG2807 202 RKVWRSPLAWQVTL-----FMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQ-LAQLPTALLIPLLARRSKNQRP 275 (395)
T ss_pred cccccCchhHHHHH-----HHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHH-HHHHHHHHHHHHHHHHhcccch
Confidence 45677765554322 22333445677888999999999998776555555444 4578888988888885 46677
Q ss_pred HHHHhHHHHHHHHH
Q 021808 151 LALSSLAGVIISLV 164 (307)
Q Consensus 151 ~l~~~~~~~~~~~~ 164 (307)
..+.....+.+..+
T Consensus 276 ~~~~~~~~~l~G~~ 289 (395)
T COG2807 276 LVVLALLLMLVGLV 289 (395)
T ss_pred HHHHHHHHHHHHHH
Confidence 66544444444333
No 218
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.50 E-value=0.0048 Score=56.40 Aligned_cols=154 Identities=17% Similarity=0.050 Sum_probs=71.0
Q ss_pred HHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccC-----chHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCch
Q 021808 108 TIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFG-----RKKLALSSLAGVIISLVLLSWAFISGSSASSSGVY 182 (307)
Q Consensus 108 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~G-----rR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (307)
.+.+..|.+..+.....+..... .. .-++.|.++||++ ||+.++.+..... + ..+. .... ..+ .
T Consensus 51 ~l~~~lg~s~~~i~~~~sl~~lp-w~-~K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~-~-~~~~-~l~~--~~~--~-- 119 (468)
T TIGR00788 51 MLTDDLGLDGARYQRLVGLSSLG-WA-LKPFAGVMSDTFPLFGYTKRWYLVLSGLLGS-A-ILYG-LLPG--KVS--S-- 119 (468)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHH-HH-HHHHHHHHHHhcCCCCccchHHHHHHHHHHH-H-HHHH-hccc--ccc--h--
Confidence 33445688765543433333222 22 2456999999997 6666665544332 1 1111 1111 111 0
Q ss_pred hHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhh---HHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHH
Q 021808 183 GWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGG---MSATVNWISNLIVAQTFLTVAELVGTGATFLILAGI 259 (307)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (307)
.........+.... ....-...-.+..|..+ +.+....+ .......+|..+++.....+.+..++...+.+.+.+
T Consensus 120 ~~~~~~~~~l~~~~-~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l 197 (468)
T TIGR00788 120 AKVAAAFIFLAALA-KALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAAL 197 (468)
T ss_pred HHHHHHHHHHHHHH-HHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHH
Confidence 11111111111111 11222344567789998 44433222 222222245555544444445545555566666655
Q ss_pred HHHHHHHHHhhccCCC
Q 021808 260 AVLAVVFVILFVPETQ 275 (307)
Q Consensus 260 ~~~~~~~~~~~lpet~ 275 (307)
.++. ....++.||.+
T Consensus 198 ~ll~-~~~~~~~~E~~ 212 (468)
T TIGR00788 198 LLLQ-LFVSNLSKERR 212 (468)
T ss_pred HHHH-HHHHHhccccc
Confidence 5555 33456778865
No 219
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.47 E-value=0.0089 Score=55.70 Aligned_cols=103 Identities=11% Similarity=0.112 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCchH-HHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcc
Q 021808 124 LSLAVAGTNAVGTIVGIYLIDHFGRKK-LALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMG 202 (307)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~l~Dr~GrR~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (307)
.+.........|.++.+.+..++||-| .++.+...+.+. ++.+... ...+.........+.++++ +. ..
T Consensus 354 ~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~---~Gama~~-~~~n~~~~i~~~~l~g~gi--G~----~~ 423 (599)
T PF06609_consen 354 ISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAF---CGAMAAV-RPDNKNAAIAFLVLAGFGI--GG----IL 423 (599)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHH---HHHHHHc-cCCCcchHHHHHHHHHHhH--HH----HH
Confidence 344444445667778888888888754 444443333222 1211111 1111111111111111111 11 11
Q ss_pred cccceeecccCCcccchhhhhHHHHHHHHHHHHH
Q 021808 203 PVPWTLNSEVYPEQYRGICGGMSATVNWISNLIV 236 (307)
Q Consensus 203 ~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~ 236 (307)
....+...-..|.+.-++++|+..+...+|+.++
T Consensus 424 ~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg 457 (599)
T PF06609_consen 424 VPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIG 457 (599)
T ss_pred HHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHH
Confidence 1223444556788888888888877766655443
No 220
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.07 E-value=0.0031 Score=55.95 Aligned_cols=51 Identities=20% Similarity=0.242 Sum_probs=32.5
Q ss_pred HhhHHHHH-HcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHh
Q 021808 104 YYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSS 155 (307)
Q Consensus 104 ~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~ 155 (307)
.|.+..++ ..|.+..+.....+. .....++..++.|.++||+|.|+-++..
T Consensus 28 pF~~iWL~~~~GLs~~~iG~i~s~-~~~~~l~~qp~~G~i~Dklg~kK~Ll~~ 79 (412)
T PF01306_consen 28 PFFPIWLTQVAGLSGTEIGIIFSA-GSLFALLAQPVYGFISDKLGLKKHLLWF 79 (412)
T ss_dssp HHHHHHHHHHH---HHHHHHHHHH-HHHHHHHTHHHHHHHHHHCTTCSHHHHH
T ss_pred HHHHHHHccccCCCHHHHHHHHHH-HHHHHHHHHHhHHHhcchhhhhHHHHHH
Confidence 34455555 478877766555554 3345788889999999999977765543
No 221
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.02 E-value=0.02 Score=43.73 Aligned_cols=128 Identities=15% Similarity=0.074 Sum_probs=64.4
Q ss_pred hcCchhhHHhhHHHHHHcCCC-----ChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHH
Q 021808 96 FTGINTVMYYSPTIVQMAGFQ-----SNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF 170 (307)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~ 170 (307)
++++....+..-+++.+.+.. ++........+......++++++..+.+++|.|+.++++...-.+-.......
T Consensus 9 Ftaf~t~~~i~~svi~s~~~~~~~~i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~- 87 (156)
T PF05978_consen 9 FTAFQTQSFIQESVIHSVHERNPSSISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYP- 87 (156)
T ss_pred HHHHhhhhHHHHHHHHHHhhcCcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhh-
Confidence 444444444444454433322 11122333333444467788889999999999999887765444333222111
Q ss_pred hhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHH
Q 021808 171 ISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIV 236 (307)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~ 236 (307)
+ .+..+.+..+.....+..+.+. ..|+.+....+.|++..|+.-.+...+.+++
T Consensus 88 ---~--------~~~l~~~s~l~G~~~a~lW~aq-g~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G 141 (156)
T PF05978_consen 88 ---N--------SYTLYPASALLGFGAALLWTAQ-GTYLTSYSTEETIGRNTGIFWAIFQSSLIFG 141 (156)
T ss_pred ---h--------HHHHHHHHHHHhhhhHHhhHhh-hHHHHHcCCHHHHhhHHHHHHHHHHHHHHHH
Confidence 0 0112222222212222222222 2566777777778777776655555544444
No 222
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.02 E-value=0.061 Score=49.32 Aligned_cols=71 Identities=17% Similarity=0.148 Sum_probs=43.5
Q ss_pred CcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Q 021808 200 GMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVVFVILF 270 (307)
Q Consensus 200 ~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (307)
...|..+.+.+|..|++.|++..|+......++..+++..........+....+...+..+++..++..+.
T Consensus 397 ~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (475)
T TIGR00924 397 MISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALM 467 (475)
T ss_pred HHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 34566678889999999999999998877777777665543322222222234444444444444444333
No 223
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.00 E-value=0.0097 Score=52.94 Aligned_cols=113 Identities=19% Similarity=0.233 Sum_probs=56.4
Q ss_pred cCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCc-------hHHH-HHhHHHHHHHHHHHHHHHhhcCCCCCCCchhH
Q 021808 113 AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGR-------KKLA-LSSLAGVIISLVLLSWAFISGSSASSSGVYGW 184 (307)
Q Consensus 113 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~Gr-------R~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (307)
.+.+.+. ..+...+..+++.+|.+++|.++||+-| .+.- ++.......++..+.+....... .....
T Consensus 278 ~~~~~~~-~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~----s~~~~ 352 (493)
T KOG1330|consen 278 IGFDHNA-TLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSS----SMIFG 352 (493)
T ss_pred hCCcccc-chhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhH----HHHHH
Confidence 3443333 4555666666789999999999999533 2221 22222222222222222111111 11112
Q ss_pred HHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHH
Q 021808 185 IAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISN 233 (307)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~ 233 (307)
..++.++....+++ ..... -+..|+.|++.|.++.++...+..+.+
T Consensus 353 ~il~~~g~~~~~~~--~a~n~-~i~l~vV~p~~Rt~a~a~~~~~~h~fg 398 (493)
T KOG1330|consen 353 LILFLVGETISWFN--WATNN-PIFLEVVPPSRRTTAYALDTVFEHIFG 398 (493)
T ss_pred HHHHHHHHHHHhcc--ccccc-ceeeEecCcccccHHHHHHHHHHHHhc
Confidence 22222333333332 23333 345799999999988887766555433
No 224
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=96.84 E-value=0.036 Score=50.99 Aligned_cols=105 Identities=12% Similarity=0.026 Sum_probs=55.6
Q ss_pred HHHHHHHHHHhhcccCchHH-------HHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccc
Q 021808 132 NAVGTIVGIYLIDHFGRKKL-------ALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPV 204 (307)
Q Consensus 132 ~~~~~~~~~~l~Dr~GrR~~-------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (307)
.++..++.+.+.||+|||+. +..+.+..+++.+.+............ ....+..+....+.... -....+.
T Consensus 322 iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~-~~s~~~~i~~~~l~g~G-e~~~~~~ 399 (489)
T PRK10207 322 VVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQG-LTSPWFIVLVYLFQSLG-ELFISAL 399 (489)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC-ccCHHHHHHHHHHHHHH-HHHHhHH
Confidence 34667778899999999963 445555554443332111110110000 11112122222222222 1222344
Q ss_pred cceeecccCCcccchhhhhHHHHHHHHHHHHHHH
Q 021808 205 PWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQ 238 (307)
Q Consensus 205 ~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~ 238 (307)
...+..+..|.+.++.++|+......+|+.++..
T Consensus 400 g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~ 433 (489)
T PRK10207 400 GLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGY 433 (489)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566778899999999999887666666666543
No 225
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.74 E-value=0.084 Score=47.04 Aligned_cols=151 Identities=19% Similarity=0.212 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCchHHH-HHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcC
Q 021808 122 LLLSLAVAGTNAVGTIVGIYLIDHFGRKKLA-LSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPG 200 (307)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (307)
-+......+.++++.++.|.+.||.+.-+.. ........++...+.. ......+ . .. +...+...+++..+
T Consensus 304 G~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~--~t~~~~~--~--vi--v~~t~~~~g~~~~~ 375 (480)
T KOG2563|consen 304 GYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLT--CTLFLGD--S--VI--VFTTCGLLGFFGTG 375 (480)
T ss_pred chhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHH--hhccCCc--e--Ee--hhhhHHHHHHhhcC
Confidence 3444455556789999999999999664433 2222223333211111 1111111 1 11 11122233455666
Q ss_pred cccccceeeccc-CCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhC---Cchh-HHHHHHHHHHHHHHHHhhccCCC
Q 021808 201 MGPVPWTLNSEV-YPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG---TGAT-FLILAGIAVLAVVFVILFVPETQ 275 (307)
Q Consensus 201 ~~~~~~~~~~El-fPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~lpet~ 275 (307)
..|+..-+..|. ||...+ +.+|+....+.+.++....+-.......+ +..+ -+++...+.+.+....++.|+-+
T Consensus 376 ~~Pig~ElgvE~TyPv~E~-tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~ 454 (480)
T KOG2563|consen 376 YLPIGFELGVETTYPVAEG-TSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYR 454 (480)
T ss_pred CCCcceeeeeeeccccCCc-ccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHH
Confidence 777777777887 777765 46677666666555544333333333222 1112 23444444445554555555555
Q ss_pred CCCHHH
Q 021808 276 GLTFLE 281 (307)
Q Consensus 276 ~~~l~e 281 (307)
++..|+
T Consensus 455 R~~~e~ 460 (480)
T KOG2563|consen 455 RLRAEA 460 (480)
T ss_pred hHhhhh
Confidence 555553
No 226
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.58 E-value=0.067 Score=48.42 Aligned_cols=156 Identities=24% Similarity=0.217 Sum_probs=73.8
Q ss_pred HHHHHHcCCCChHHHHHHHHHHHHHHHH--HHHHHHHhhccc---C-chHH-HHHhHHHHHHHHHHHHHHHhhcCCCCCC
Q 021808 107 PTIVQMAGFQSNQLALLLSLAVAGTNAV--GTIVGIYLIDHF---G-RKKL-ALSSLAGVIISLVLLSWAFISGSSASSS 179 (307)
Q Consensus 107 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~Dr~---G-rR~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (307)
+.+.+..|.++.+.+.+.. ...++ .-++.|.++|-+ | ||+. ++++..+.+++.+.+... .....+.
T Consensus 14 ~~l~~~l~ls~~~~~~~~~----~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~--~~~~~s~- 86 (433)
T PF03092_consen 14 PFLKDDLGLSPAQLQRLSS----LASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALL--PASESSA- 86 (433)
T ss_pred HHHHHHcCCCHHHHHHHHH----HHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhc--ccccchh-
Confidence 4455677887655433322 22333 357889999987 2 4444 444544443333332221 1101110
Q ss_pred CchhHHHHHHHHHHHHHHhcCcccccceeecccC---CcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHH
Q 021808 180 GVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVY---PEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLIL 256 (307)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Elf---Pt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (307)
....+.+.+...+... .-.+.-++.+|.- |.+ |+...+........|++++........+..+....+.+.
T Consensus 87 ----~~~~~~l~la~~g~a~-~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~ 160 (433)
T PF03092_consen 87 ----AIAVVLLFLASFGYAF-ADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLIS 160 (433)
T ss_pred ----hhHHHHHHHHHHHHHH-HHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHH
Confidence 1111111111111111 1112234445654 555 666666666666666666655544444444544556666
Q ss_pred HHHHHHHHHHHHhhccCCC
Q 021808 257 AGIAVLAVVFVILFVPETQ 275 (307)
Q Consensus 257 ~~~~~~~~~~~~~~lpet~ 275 (307)
+.+..+..+...++.+|.+
T Consensus 161 ~~~~~l~~~~~~~~~~e~~ 179 (433)
T PF03092_consen 161 AALPLLMLIVALFLLEERK 179 (433)
T ss_pred HHHHHHHHHHHHHhhhhcc
Confidence 6555555555555666633
No 227
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=96.58 E-value=0.012 Score=55.83 Aligned_cols=87 Identities=17% Similarity=0.245 Sum_probs=50.6
Q ss_pred hhhhhcchhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCc-
Q 021808 71 YLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGR- 148 (307)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~Gr- 148 (307)
.+++++++.++...+.... .....+....|+|.+++. .|.+......+.........+++.+++|+++||+++
T Consensus 323 ~~~Ll~n~~f~~~~l~~~~-----~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 323 IKRLLCNPIYMLVILAQVI-----DSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHHcCcHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 4567777766544333221 223344555678888774 566555444443333333457889999999999985
Q ss_pred -hHHHHHhHHHHHHH
Q 021808 149 -KKLALSSLAGVIIS 162 (307)
Q Consensus 149 -R~~l~~~~~~~~~~ 162 (307)
|+.+..+.+...+.
T Consensus 398 ~~~~~~~~~~~~~~~ 412 (633)
T TIGR00805 398 VKKAAYFAICLSTLS 412 (633)
T ss_pred HHHHHHHHHHHHHHH
Confidence 45554444444444
No 228
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=96.16 E-value=0.22 Score=43.95 Aligned_cols=111 Identities=15% Similarity=0.104 Sum_probs=59.6
Q ss_pred HHHHHHHHHhhcccC-----chHHHHHh-HHHHHHHHHHHHH--HHhhc-CCCCCCCchhHHHHHHHHHHHHHHhcCc--
Q 021808 133 AVGTIVGIYLIDHFG-----RKKLALSS-LAGVIISLVLLSW--AFISG-SSASSSGVYGWIAVIGLALYIAFFAPGM-- 201 (307)
Q Consensus 133 ~~~~~~~~~l~Dr~G-----rR~~l~~~-~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 201 (307)
.+.-+..|+.+|+-+ ||..+++. ............. ..... ..........+....++. +..+..+.
T Consensus 28 ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~--F~l~G~G~~~ 105 (403)
T PF03209_consen 28 APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALA--FLLYGLGVHA 105 (403)
T ss_pred HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHH--HHHHHhhHhH
Confidence 355678899999999 88877643 3333332222211 11111 001111111221222111 11112222
Q ss_pred -ccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHH
Q 021808 202 -GPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAE 245 (307)
Q Consensus 202 -~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~ 245 (307)
+....+..++.-|.+.|++..++....-.+|.++++.....+.+
T Consensus 106 s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~ 150 (403)
T PF03209_consen 106 SGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLD 150 (403)
T ss_pred hHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 22334678999999999999999888877777776655554443
No 229
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.06 E-value=0.15 Score=46.36 Aligned_cols=38 Identities=21% Similarity=0.134 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHhhcccC--chHHHHHhHHHHHHHHHHH
Q 021808 128 VAGTNAVGTIVGIYLIDHFG--RKKLALSSLAGVIISLVLL 166 (307)
Q Consensus 128 ~~~~~~~~~~~~~~l~Dr~G--rR~~l~~~~~~~~~~~~~~ 166 (307)
..+...++.++.|+...|.| |||++ .+.++++++.+..
T Consensus 80 ~slg~~i~~liF~~Ws~k~~~~k~Pli-~s~ii~~~g~llY 119 (488)
T KOG2325|consen 80 SSLGHAIFSLIFGIWSNKTGSVKKPLI-VSFLIAIIGNLLY 119 (488)
T ss_pred HHHHHHhcchhhcccccccCCcccCHH-HHHHHHHHHHHHH
Confidence 44456788999999999999 55554 4555555555544
No 230
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=96.06 E-value=0.5 Score=43.67 Aligned_cols=104 Identities=11% Similarity=0.044 Sum_probs=53.5
Q ss_pred HHHHHHHHHhhcccCch----HHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCccccccee
Q 021808 133 AVGTIVGIYLIDHFGRK----KLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTL 208 (307)
Q Consensus 133 ~~~~~~~~~l~Dr~GrR----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (307)
++..++.+++-+|.+|| ..+.++....+++.+.+.......+.. ..+..+..+....+. ........|....+
T Consensus 330 il~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~--~~vs~~~~~~~~~l~-~~ge~~~~p~g~s~ 406 (500)
T PRK09584 330 MIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDA--GIVSVNWLIASYGLQ-SIGELMISGLGLAM 406 (500)
T ss_pred HHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCC--CccCHHHHHHHHHHH-HHHHHHHhHHHHHH
Confidence 44445554455555544 455566666666655543332211111 111122222222222 22223345566677
Q ss_pred ecccCCcccchhhhhHHHHHHHHHHHHHHHh
Q 021808 209 NSEVYPEQYRGICGGMSATVNWISNLIVAQT 239 (307)
Q Consensus 209 ~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~ 239 (307)
..++.|++.|+...|+-......++.+++..
T Consensus 407 ~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~ 437 (500)
T PRK09584 407 VAQLVPQRLMGFIMGSWFLTTAGAALIAGYV 437 (500)
T ss_pred HHHhCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999997655555555555443
No 231
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=95.43 E-value=0.52 Score=39.23 Aligned_cols=88 Identities=27% Similarity=0.354 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceee
Q 021808 130 GTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLN 209 (307)
Q Consensus 130 ~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (307)
.....+.++.|.+.||.|||+.+..+........+.... .. . .. .+..+..... .+.......+....+.
T Consensus 50 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~--~~-~----~~--~~~~~~~~~~-~g~~~~~~~~~~~~~~ 119 (338)
T COG0477 50 LGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLAL--AP-N----VG--LALLLILRLL-QGLGGGGLLPVASALL 119 (338)
T ss_pred HHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHh--Cc-c----ch--HHHHHHHHHH-HHhhhHHHHHHHHHHH
Confidence 334566689999999999997766554432222111111 11 0 00 1111111111 1222223345556788
Q ss_pred cccCCc-ccchhhhhHHHH
Q 021808 210 SEVYPE-QYRGICGGMSAT 227 (307)
Q Consensus 210 ~ElfPt-~~R~~~~g~~~~ 227 (307)
+|.+|. +.|+...+....
T Consensus 120 ~~~~~~~~~~~~~~~~~~~ 138 (338)
T COG0477 120 SEWFPEATERGLAVGLVTL 138 (338)
T ss_pred HHhcCchhHHHHHHHHHHH
Confidence 999998 557666665555
No 232
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=95.32 E-value=0.059 Score=48.76 Aligned_cols=42 Identities=17% Similarity=0.224 Sum_probs=33.1
Q ss_pred eeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhC
Q 021808 207 TLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVG 248 (307)
Q Consensus 207 ~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (307)
.+.+|+.|...-|+..++..+..+.+..++...-..+....+
T Consensus 341 vl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 341 VLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred HHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 467999999999999999999988888777665555555443
No 233
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=95.20 E-value=1.8 Score=39.57 Aligned_cols=109 Identities=7% Similarity=0.110 Sum_probs=59.9
Q ss_pred HHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCC-CCC------------Cc-------hhHHHHHHHHH
Q 021808 133 AVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSA-SSS------------GV-------YGWIAVIGLAL 192 (307)
Q Consensus 133 ~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~------------~~-------~~~~~~~~~~~ 192 (307)
++..++-+++++|++|+++.-............+.......... +++ .. ..|.... ..+
T Consensus 58 ~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~-FYv 136 (472)
T TIGR00769 58 VIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFAL-FYV 136 (472)
T ss_pred HHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHH-HHH
Confidence 34467789999999999987654444444444443332211100 000 00 0111111 111
Q ss_pred HHHHHhcCc-ccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHH
Q 021808 193 YIAFFAPGM-GPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLT 242 (307)
Q Consensus 193 ~~~~~~~~~-~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~ 242 (307)
..-.++... +-+.|.+++|++.++.=.+..++....++++.++++.....
T Consensus 137 ~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~ 187 (472)
T TIGR00769 137 MAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKY 187 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111222222 23678899999998876668888888888888877655443
No 234
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=95.18 E-value=1.4 Score=40.52 Aligned_cols=103 Identities=13% Similarity=0.090 Sum_probs=53.5
Q ss_pred HHHHHHHHHhhcccCc--h-H---H-HHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCccccc
Q 021808 133 AVGTIVGIYLIDHFGR--K-K---L-ALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVP 205 (307)
Q Consensus 133 ~~~~~~~~~l~Dr~Gr--R-~---~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (307)
++.+++.+++-.|.+| | + . ...+++.++++.+.+.......... ..+..+..+....++ ...-...+|+.
T Consensus 322 i~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~--~~~s~~wl~~~~~~~-t~gEl~~sPvg 398 (493)
T PRK15462 322 MLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMY--GHSSLPLMVLGLAVM-GFAELFIDPVA 398 (493)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCC--CCcCHHHHHHHHHHH-HHHHHHHChHH
Confidence 4455665666666633 2 1 1 2345555555554443322222111 112222222222222 33334567888
Q ss_pred ceeecccCCcccchhhhhHHHHHH-HHHHHHHHH
Q 021808 206 WTLNSEVYPEQYRGICGGMSATVN-WISNLIVAQ 238 (307)
Q Consensus 206 ~~~~~ElfPt~~R~~~~g~~~~~~-~~~~~~~~~ 238 (307)
.++.+++.|++.|+...|+-.... .++..+++.
T Consensus 399 ls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~ 432 (493)
T PRK15462 399 MSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGV 432 (493)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999988865432 455544433
No 235
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=94.95 E-value=0.21 Score=43.68 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=26.2
Q ss_pred eeecccCCcccchhhhhHHHHHHHHHHHHHHHh
Q 021808 207 TLNSEVYPEQYRGICGGMSATVNWISNLIVAQT 239 (307)
Q Consensus 207 ~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~ 239 (307)
.+.....|.+.|++..|+..+.+..+-.+++..
T Consensus 375 ~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv 407 (451)
T KOG2615|consen 375 SLVHKYGPQSQRGTLNGIFRSLGALARAIGPLV 407 (451)
T ss_pred HHHHhcCCcccchHHHHHHHHHHHHHHHhhhhh
Confidence 455778899999999999998888777766543
No 236
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=94.87 E-value=1.5 Score=38.33 Aligned_cols=156 Identities=16% Similarity=0.145 Sum_probs=81.5
Q ss_pred hhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCC
Q 021808 101 TVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSG 180 (307)
Q Consensus 101 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (307)
.+.--.+.+-+..|.+........+++. .+....++++..+.+|+|-++.+..+++..++... .-... ....
T Consensus 30 svgPLL~~Ir~~~gls~s~aGlLTtLPl-l~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~-----iR~~~--~~~~ 101 (395)
T COG2807 30 SVGPLLDEIRQDLGLSFSVAGLLTTLPL-LAFGLFAPAAPRLARRFGEERSLFLALLLIAAGIL-----IRSLG--GLPL 101 (395)
T ss_pred hhhhhHHHHHHHhcccHHHHHHHHHHHH-HHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHH-----HHhcc--cHHH
Confidence 3334456666777887666555544444 44567788999999999999987765543333322 11111 0001
Q ss_pred chhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHh-CCchhHHHHHHH
Q 021808 181 VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELV-GTGATFLILAGI 259 (307)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 259 (307)
.+.-..+++.++. ..+.+.+..+=|-||.++= ..+|+....-.+++.+++..-+.+.... ++.....+++..
T Consensus 102 L~~gt~l~G~gIa------v~nVLLPslIK~~Fpk~~~-~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~ 174 (395)
T COG2807 102 LFLGTLLAGAGIA------VINVLLPSLIKRDFPKRVG-LMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALL 174 (395)
T ss_pred HHHHHHHHHhhHH------HHHHhhhHHHHhhcccchh-hHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHH
Confidence 1111112222221 1133444566788998864 3566655555555555554444444433 344455555555
Q ss_pred HHHHHHHHHhhccCC
Q 021808 260 AVLAVVFVILFVPET 274 (307)
Q Consensus 260 ~~~~~~~~~~~lpet 274 (307)
+++..+ .++|..
T Consensus 175 allAl~---~WlPq~ 186 (395)
T COG2807 175 ALLALL---IWLPQA 186 (395)
T ss_pred HHHHHH---HHhhhc
Confidence 554433 455664
No 237
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=94.72 E-value=0.049 Score=49.55 Aligned_cols=85 Identities=16% Similarity=0.153 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecc
Q 021808 132 NAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSE 211 (307)
Q Consensus 132 ~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 211 (307)
.++..++.+.+++|+|+-+++..++.+.++=.+.+.+. .++ |+.+..=.+-...+... ....-+|++.
T Consensus 419 EI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L----~n~-------W~vLPieilqgit~ali-Waa~~sY~s~ 486 (618)
T KOG3762|consen 419 EILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL----QNP-------WMVLPIEILQGITHALI-WAAIISYASH 486 (618)
T ss_pred hHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh----cCc-------hheeeHHHHHHHHHHHH-HHHHHHHHHh
Confidence 55667788899999999998876655444433322221 111 11111111111111111 1222368889
Q ss_pred cCCcccchhhhhHHHHH
Q 021808 212 VYPEQYRGICGGMSATV 228 (307)
Q Consensus 212 lfPt~~R~~~~g~~~~~ 228 (307)
..|++.|+++.|+....
T Consensus 487 vaPp~l~at~Q~l~~g~ 503 (618)
T KOG3762|consen 487 VAPPGLRATAQGLLQGI 503 (618)
T ss_pred hCCCcchHHHHHHHHHH
Confidence 99999999998887654
No 238
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.50 E-value=1.1 Score=40.66 Aligned_cols=114 Identities=17% Similarity=0.211 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcc---cCchHHHHHhHHHHHHHHHHHHHHHhhcCCC-----CCC---CchhHHHHHHHH
Q 021808 123 LLSLAVAGTNAVGTIVGIYLIDH---FGRKKLALSSLAGVIISLVLLSWAFISGSSA-----SSS---GVYGWIAVIGLA 191 (307)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~l~Dr---~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~ 191 (307)
...+......+++....+.+.|| +||++++..+..+..+..++...... ...+ ... .....+.+++..
T Consensus 283 i~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p-~dap~~~t~~~~~~~~~~~~~~~ii~~ 361 (461)
T KOG3098|consen 283 IYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFP-NDAPLRPTDSPPLLFTPSYYLALIIGF 361 (461)
T ss_pred HHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhcccc-ccCCCCCCcccccccccchhHHHHHHH
Confidence 33444444566667777777654 67888777665555444444332211 1110 000 011112222222
Q ss_pred HHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHh
Q 021808 192 LYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQT 239 (307)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~ 239 (307)
+. +..=.....+.+.++..++|.+ |+.+.++.-.+..+.+-+....
T Consensus 362 l~-G~~D~~~~t~~~~ii~~~~~~~-~~~~fsi~kfyq~~~s~v~~f~ 407 (461)
T KOG3098|consen 362 LL-GFGDACFNTQRYVIIALLYPDD-RAQAFSLFKFYQSVASCVAFFF 407 (461)
T ss_pred HH-hhHHHHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHhhh
Confidence 22 2222233556677888999554 8778887777776666544333
No 239
>PTZ00207 hypothetical protein; Provisional
Probab=94.48 E-value=0.66 Score=43.66 Aligned_cols=86 Identities=8% Similarity=0.027 Sum_probs=43.1
Q ss_pred cccceeecccCCcccchhhhhHHHHHHHHHHHHHH-HhhHHHHH----Hh------CC---chhHHHHHHHHHHHHHHHH
Q 021808 203 PVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVA-QTFLTVAE----LV------GT---GATFLILAGIAVLAVVFVI 268 (307)
Q Consensus 203 ~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~-~~~~~~~~----~~------~~---~~~~~~~~~~~~~~~~~~~ 268 (307)
++.....+|+|. +.=++-..+....+-+|+++.. ..+..+-+ .. |. ..+++++++++..+.+...
T Consensus 471 ~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~ 549 (591)
T PTZ00207 471 ATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITST 549 (591)
T ss_pred HHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHh
Confidence 344577899999 7665555444444444444321 11111111 11 11 1256777777777766544
Q ss_pred hhccCCC---CCCHHHHHHHHhhc
Q 021808 269 LFVPETQ---GLTFLEVEQMWKER 289 (307)
Q Consensus 269 ~~lpet~---~~~l~e~~~~~~~~ 289 (307)
.+--+|| .+.++|=.+..|+.
T Consensus 550 ~l~~R~r~~y~~~~~~~~~~~~~~ 573 (591)
T PTZ00207 550 YVHLQYRRLCLKALEERRRIREEE 573 (591)
T ss_pred heeeehHHHHHHHHHHHHHHHhhh
Confidence 4334554 34555555444443
No 240
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.38 E-value=0.078 Score=50.35 Aligned_cols=87 Identities=16% Similarity=0.210 Sum_probs=50.6
Q ss_pred hhhhhcchhHHHHHHHHHHHHHHHhhcCchhhHHhhHHHHH-HcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhccc--C
Q 021808 71 YLDVFKSKEIRLAFLAGAGLQAFQQFTGINTVMYYSPTIVQ-MAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHF--G 147 (307)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~--G 147 (307)
.+++++++-+-. ..+........+.....|+|.+++ +.|.+......+...+......+|..++|+++.|+ +
T Consensus 385 ~~~ll~N~if~~-----~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 385 IKRLLSNPIFML-----VVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred HHHHhcCchHHH-----HHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence 455666654422 223333334455566678898887 45666555445554555555678899999999987 3
Q ss_pred chHHHHHhHHHHHHH
Q 021808 148 RKKLALSSLAGVIIS 162 (307)
Q Consensus 148 rR~~l~~~~~~~~~~ 162 (307)
-|.+..+.++...++
T Consensus 460 ~r~~a~~~~~~~~l~ 474 (735)
T KOG3626|consen 460 ARGAAKFVIVCSVLS 474 (735)
T ss_pred HHHHHHHHHHHHHHH
Confidence 444444333333333
No 241
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=94.34 E-value=0.012 Score=54.70 Aligned_cols=57 Identities=19% Similarity=0.347 Sum_probs=0.0
Q ss_pred hcCchhhHHhhHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccC--chHHH
Q 021808 96 FTGINTVMYYSPTIVQM-AGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFG--RKKLA 152 (307)
Q Consensus 96 ~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~G--rR~~l 152 (307)
.........|.|.++++ .+.+....+.+........+++|.+++|++.+|+. .|.++
T Consensus 318 ~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~ 377 (539)
T PF03137_consen 318 SFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAA 377 (539)
T ss_dssp ------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHH
Confidence 34445556788888774 55555544444445444456788999999999874 34444
No 242
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=94.32 E-value=1.4 Score=39.23 Aligned_cols=94 Identities=18% Similarity=0.119 Sum_probs=47.2
Q ss_pred HHHHHHHHHHhhcccCchHHHHHhHHH-HHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeec
Q 021808 132 NAVGTIVGIYLIDHFGRKKLALSSLAG-VIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNS 210 (307)
Q Consensus 132 ~~~~~~~~~~l~Dr~GrR~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (307)
..+-.++-|-++|+.|+|+-....+.. ..++.+.+.+. ... + +.+..+....+....+. +......++++
T Consensus 71 ia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i-~~~-s------~~~~~l~~~il~~i~~~-~s~Vfyds~L~ 141 (438)
T COG2270 71 IALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFI-PPG-S------YLLLLLLFLILASIGFE-FSNVFYDSMLP 141 (438)
T ss_pred HHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHh-CCC-c------hHHHHHHHHHHHHHhcc-hhheehhhHhh
Confidence 345567778899999998876543332 33333333221 111 1 11222222222222222 22223346778
Q ss_pred ccCCcccchhhhhHHHHHHHHHHH
Q 021808 211 EVYPEQYRGICGGMSATVNWISNL 234 (307)
Q Consensus 211 ElfPt~~R~~~~g~~~~~~~~~~~ 234 (307)
.+.+.+.-++.++++...+.+++.
T Consensus 142 ~~~~k~~~~riS~lg~~~gylgs~ 165 (438)
T COG2270 142 RLTTKDNMGRISGLGWALGYLGSV 165 (438)
T ss_pred hhcCccccCcccccccccccccch
Confidence 887776655566666666665554
No 243
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=94.12 E-value=0.8 Score=30.93 Aligned_cols=62 Identities=19% Similarity=0.160 Sum_probs=44.3
Q ss_pred hhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHH
Q 021808 105 YSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLS 167 (307)
Q Consensus 105 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~ 167 (307)
.+|...++.+.+..+. -++.........+|.+.+.++.++.++|+.+..+.+.++++...+.
T Consensus 14 lLP~M~~~~~ls~~~a-g~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma 75 (85)
T PF06779_consen 14 LLPLMQADGGLSLSQA-GWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMA 75 (85)
T ss_pred HhHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 4566667777766554 4555566666889999999999988878888777776666665554
No 244
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=94.04 E-value=0.88 Score=41.05 Aligned_cols=127 Identities=20% Similarity=0.218 Sum_probs=69.1
Q ss_pred HhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchh
Q 021808 104 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYG 183 (307)
Q Consensus 104 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (307)
.-+..++.+.|.++...+. .-....+.++.++.+..++.+|+|-.+.=+++.....+++.+....+.....+. .....
T Consensus 279 ~lmt~yl~~~G~s~~~igi-~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~-~~~s~ 356 (432)
T PF06963_consen 279 GLMTAYLKSQGYSPSVIGI-FRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPF-SSISA 356 (432)
T ss_pred HHHHHHHHHCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCc-hhhHH
Confidence 3455667777887665433 334445557888999999999999988766665555444443322222221110 11111
Q ss_pred HHHHHHHHHHH-HHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHH
Q 021808 184 WIAVIGLALYI-AFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNL 234 (307)
Q Consensus 184 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~ 234 (307)
...+.++.+-= +... ..-.. .-+.-|.-|.+.|+...|.-.+.+.....
T Consensus 357 ~~l~~gi~~SR~GLW~-fDL~~-~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~l 406 (432)
T PF06963_consen 357 YLLLGGIALSRIGLWS-FDLAV-TQIMQENVPESERGAVSGVQNSLQSLFEL 406 (432)
T ss_pred HHHHHHHHHHHHHHHh-hhHHH-HHhhcccCCHHHhhHHHHHHHHHHHHHHH
Confidence 11222211100 0000 00111 23456889999999998888777765544
No 245
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=92.31 E-value=0.12 Score=46.20 Aligned_cols=132 Identities=14% Similarity=0.112 Sum_probs=65.6
Q ss_pred hhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcc----cCchHHHH-HhHHHHHHHHHHHHHHHh----
Q 021808 101 TVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH----FGRKKLAL-SSLAGVIISLVLLSWAFI---- 171 (307)
Q Consensus 101 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr----~GrR~~l~-~~~~~~~~~~~~~~~~~~---- 171 (307)
.=..|.+-++++.|...+-.+ ..-.+.-+.+.+..++.|..+|| +||||..+ .+.....+..+++.+.-.
T Consensus 50 ~elsy~tPyl~~lGvphk~~S-~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~ 128 (498)
T KOG0637|consen 50 LELSYLTPYLQSLGVPHKWSS-IIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLL 128 (498)
T ss_pred HHhccccHHHHHcCCCccccc-ccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHH
Confidence 334577778888888654322 22223333456678899999995 79888764 344445555554443321
Q ss_pred hcCCCCC--CCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccchh-hhhHHHHHHHHHHH
Q 021808 172 SGSSASS--SGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGI-CGGMSATVNWISNL 234 (307)
Q Consensus 172 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~-~~g~~~~~~~~~~~ 234 (307)
....... ......+.++++.+.=...+...+|. -++.+++.-...+.+ +.+....+-.+|+.
T Consensus 129 lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~-ra~L~Dl~~~d~~~~~Ans~f~~f~avGnv 193 (498)
T KOG0637|consen 129 LGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPC-RALLADLARGDAKKTRANSVFSFFMAVGNV 193 (498)
T ss_pred hcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhH-HHHHHHhccChhhhhccchhHHHHHHhcce
Confidence 1111111 11111222333333222222233333 477788876666655 55444444334443
No 246
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=92.24 E-value=8.2 Score=34.59 Aligned_cols=35 Identities=20% Similarity=0.143 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHH
Q 021808 132 NAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLL 166 (307)
Q Consensus 132 ~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~ 166 (307)
.++..+...++.|.+|.|++++.+.....+...++
T Consensus 54 yl~~l~~vflltd~l~Ykpviil~~~~~i~t~~ll 88 (412)
T PF01770_consen 54 YLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLL 88 (412)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 34455667789999999999987766555554443
No 247
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=91.79 E-value=4.8 Score=37.10 Aligned_cols=42 Identities=10% Similarity=-0.009 Sum_probs=31.3
Q ss_pred ccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHH
Q 021808 204 VPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAE 245 (307)
Q Consensus 204 ~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~ 245 (307)
+.|.+++|+++.+.=-+..++....++++.++++........
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568889999988876668888888888888777665444443
No 248
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=91.77 E-value=0.38 Score=44.04 Aligned_cols=61 Identities=8% Similarity=0.096 Sum_probs=43.2
Q ss_pred cCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHH
Q 021808 97 TGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAG 158 (307)
Q Consensus 97 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~ 158 (307)
.+...+.-.++.+....|++......+..+ .-.+.+.+.++.|+++||+.+|+.++++..+
T Consensus 25 ~~~g~l~pll~vy~kQLGl~p~~~Gtl~g~-~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~ 85 (618)
T KOG3762|consen 25 ARFGSLFPLLAVYFKQLGLNPAVVGTLTGT-LPLVEFLAAPLWGFLADRYRKRRPLLLGSLL 85 (618)
T ss_pred ecccccchHHHHHHHHcCCCHHHhhhhhhH-HHHHHHHhHHHHHHHHHHHHhcCchhHHHHH
Confidence 344555667788889999987665444333 3345789999999999999887776655433
No 249
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=90.75 E-value=15 Score=34.68 Aligned_cols=59 Identities=19% Similarity=0.137 Sum_probs=34.4
Q ss_pred HHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCchHHHHHhHHHHHHHHHHH
Q 021808 107 PTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDH-FGRKKLALSSLAGVIISLVLL 166 (307)
Q Consensus 107 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr-~GrR~~l~~~~~~~~~~~~~~ 166 (307)
.++....+......+...+ ...+......+++++++|. +||=+.+.++..+..+.+..+
T Consensus 62 ~ylt~~~~~~~~~aa~~v~-~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~l 121 (571)
T KOG1237|consen 62 TYLTLELHASGGGAANNVN-AFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGL 121 (571)
T ss_pred HHHHHHhccchHHHHHHHH-HHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 3334444554433333333 3344456778899999996 588787776666555554333
No 250
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=90.58 E-value=0.9 Score=40.52 Aligned_cols=59 Identities=14% Similarity=0.113 Sum_probs=31.9
Q ss_pred hcCchhhHHhhHHHHHHcCCCChHHHH--HHHHHHHHHHHHHHHHHHHhhcccCchHHHHH
Q 021808 96 FTGINTVMYYSPTIVQMAGFQSNQLAL--LLSLAVAGTNAVGTIVGIYLIDHFGRKKLALS 154 (307)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~ 154 (307)
..|++-+.+|.-.+.+....+++...+ ..-......+.++.+..|++-.++.+-.-+..
T Consensus 260 tcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l 320 (412)
T PF01770_consen 260 TCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELAL 320 (412)
T ss_pred HhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHH
Confidence 456666777877777766222221111 11222333456667777888666666554443
No 251
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=86.03 E-value=17 Score=33.06 Aligned_cols=20 Identities=10% Similarity=0.042 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHhhcccCch
Q 021808 130 GTNAVGTIVGIYLIDHFGRK 149 (307)
Q Consensus 130 ~~~~~~~~~~~~l~Dr~GrR 149 (307)
+..++..+....+..|+..|
T Consensus 56 v~~l~~~~~~~~~~~~i~~~ 75 (437)
T TIGR00939 56 LPSLLFNSLNLFLIFRIPVT 75 (437)
T ss_pred HHHHHHHHHHHHHhhccCcc
Confidence 33444445555666666653
No 252
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=85.28 E-value=5.4 Score=36.23 Aligned_cols=31 Identities=13% Similarity=0.242 Sum_probs=19.1
Q ss_pred ccccceeecccCCcccchhhhhHHHHHHHHH
Q 021808 202 GPVPWTLNSEVYPEQYRGICGGMSATVNWIS 232 (307)
Q Consensus 202 ~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~ 232 (307)
++....+.++..+++.|-.+..+....-..|
T Consensus 390 ~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~G 420 (437)
T TIGR00939 390 GSLSMCLAPRQVDPHEREVAGALMVIFLLVG 420 (437)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 4555567788888888865555444433333
No 253
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=84.63 E-value=12 Score=34.07 Aligned_cols=102 Identities=10% Similarity=-0.116 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccc
Q 021808 125 SLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPV 204 (307)
Q Consensus 125 ~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (307)
..+......+++++++-+.|++|.|..++++...-.+....+. . .+. +....+-.+...+.+..+.+.
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl--~--~N~--------y~~yfssallG~Gaallw~Gq 123 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFL--F--PNS--------YYLYFSSALLGFGAALLWTGQ 123 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHH--h--cch--------HHHHHHHHHhhhhHHheeccc
Confidence 3334444678899999999999999998876554333332221 1 111 112222222222222222222
Q ss_pred cceeecccCCcccchhhhhHHHHHHHHHHHHHHHh
Q 021808 205 PWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQT 239 (307)
Q Consensus 205 ~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~ 239 (307)
..|++|-.+.+.+.+..++.-+++..+.++++..
T Consensus 124 -G~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~ 157 (461)
T KOG3098|consen 124 -GGYLTSNSTRETIERNISIFWAIGQSSLIIGGII 157 (461)
T ss_pred -ceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHh
Confidence 3688999999988888888877777777666543
No 254
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=84.00 E-value=31 Score=30.86 Aligned_cols=9 Identities=22% Similarity=0.899 Sum_probs=5.5
Q ss_pred cccCCcccc
Q 021808 210 SEVYPEQYR 218 (307)
Q Consensus 210 ~ElfPt~~R 218 (307)
+-.||.++-
T Consensus 142 a~~~P~~yt 150 (406)
T KOG1479|consen 142 AGLFPSEYT 150 (406)
T ss_pred hhcCCHHHH
Confidence 355677765
No 255
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=83.52 E-value=33 Score=30.71 Aligned_cols=57 Identities=16% Similarity=0.268 Sum_probs=35.3
Q ss_pred HHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhc-ccCchHHHHHhHHHHHHHHHHHH
Q 021808 110 VQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLID-HFGRKKLALSSLAGVIISLVLLS 167 (307)
Q Consensus 110 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~D-r~GrR~~l~~~~~~~~~~~~~~~ 167 (307)
-+..|++..+++.. +-.......+|..+.+++.. |.++++...+++..++++...+.
T Consensus 236 g~Vfgmsv~eTT~L-ta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii 293 (403)
T PF03209_consen 236 GEVFGMSVGETTRL-TAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALII 293 (403)
T ss_pred hHHcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHH
Confidence 34556766554444 43444445778877777665 78888877777666666655443
No 256
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=83.32 E-value=6.6 Score=35.94 Aligned_cols=119 Identities=17% Similarity=0.257 Sum_probs=70.3
Q ss_pred HcCCCChHHHHHHHHHHHHHHHHHHHHHH-HhhcccCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHH
Q 021808 112 MAGFQSNQLALLLSLAVAGTNAVGTIVGI-YLIDHFGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGL 190 (307)
Q Consensus 112 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~Dr~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (307)
..+.+.+..+....+.. ....++.++.. ++...+|-|+++..|+..-.+....+.+.. .. |.+....
T Consensus 271 ~f~w~~~~~s~~~~~~~-~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~---~~--------w~~~~~~ 338 (463)
T KOG2816|consen 271 KFGWNKKEFSDLLSLVS-ILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFAT---ET--------WMMFAAG 338 (463)
T ss_pred ecCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhc---cc--------hhhhHHH
Confidence 34555555554444443 33566666655 888889999977666655555544443221 11 2222221
Q ss_pred HHHHHHHhcCcccccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHH
Q 021808 191 ALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVA 244 (307)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~ 244 (307)
. ...++....+...++.+-+-+.+.|++..++.......+.++++..+..+.
T Consensus 339 v--~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 339 V--VVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred H--HHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 1 122233344555567778888899999999888887777777766655543
No 257
>PRK03612 spermidine synthase; Provisional
Probab=82.67 E-value=42 Score=31.35 Aligned_cols=22 Identities=9% Similarity=0.128 Sum_probs=12.9
Q ss_pred hhhHHHHHHHHHHHHHHHhhHH
Q 021808 221 CGGMSATVNWISNLIVAQTFLT 242 (307)
Q Consensus 221 ~~g~~~~~~~~~~~~~~~~~~~ 242 (307)
..|-.+..+.+|+++++.....
T Consensus 146 ~~g~ly~~ntlGa~~G~l~~~~ 167 (521)
T PRK03612 146 NVATVLAADYLGALVGGLAFPF 167 (521)
T ss_pred hhhhhHhHHhHHHHHHHHHHHH
Confidence 4455566666777766655443
No 258
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=82.50 E-value=4.1 Score=35.00 Aligned_cols=39 Identities=8% Similarity=-0.096 Sum_probs=30.6
Q ss_pred ceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHH
Q 021808 206 WTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVA 244 (307)
Q Consensus 206 ~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~ 244 (307)
..|++.+.|.+.+++..++.+..+.+|+++++.....+.
T Consensus 32 n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i 70 (310)
T TIGR01272 32 NPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLI 70 (310)
T ss_pred HHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 367788889988988999999999888887766554433
No 259
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=82.47 E-value=2 Score=38.08 Aligned_cols=37 Identities=32% Similarity=0.249 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHhhcccC--chHHHHHhHHHHHHHH
Q 021808 127 AVAGTNAVGTIVGIYLIDHFG--RKKLALSSLAGVIISL 163 (307)
Q Consensus 127 ~~~~~~~~~~~~~~~l~Dr~G--rR~~l~~~~~~~~~~~ 163 (307)
...+..++++.+.|.+.||++ |-.....+....+++.
T Consensus 314 p~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~ 352 (464)
T KOG3764|consen 314 PASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSS 352 (464)
T ss_pred ccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHh
Confidence 344457789999999999999 5333344444333333
No 260
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=82.00 E-value=0.36 Score=40.70 Aligned_cols=95 Identities=15% Similarity=0.092 Sum_probs=49.9
Q ss_pred HHHHHHHHHHhhcc-cCchHHHHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeec
Q 021808 132 NAVGTIVGIYLIDH-FGRKKLALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNS 210 (307)
Q Consensus 132 ~~~~~~~~~~l~Dr-~GrR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (307)
.++-+.++|+++|| +|-|...++.+....+.-+.+..-. + ....|.+..+-.++....-.. ......|..
T Consensus 92 NvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Gg-------i-~~aFw~M~~GRF~FGIGgESl-AVaQN~yav 162 (459)
T KOG4686|consen 92 NVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGG-------I-SHAFWTMLAGRFLFGIGGESL-AVAQNKYAV 162 (459)
T ss_pred CEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhch-------H-HHHHHHHHhhheeeccCchhh-hhhhcceeE
Confidence 56677899999997 4666543332222222222221110 0 011244455544332211110 111124666
Q ss_pred ccCCcccchhhhhHHHHHHHHHHHH
Q 021808 211 EVYPEQYRGICGGMSATVNWISNLI 235 (307)
Q Consensus 211 ElfPt~~R~~~~g~~~~~~~~~~~~ 235 (307)
--|--+.-+.+.|+-.+..++|+..
T Consensus 163 ~wFKGKELn~vfGlqlSvAR~Gstv 187 (459)
T KOG4686|consen 163 YWFKGKELNFVFGLQLSVARLGSTV 187 (459)
T ss_pred EEecCccccchhhHHHHHHHhhcee
Confidence 7788888888999999998888754
No 261
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=80.41 E-value=9.9 Score=28.80 Aligned_cols=88 Identities=11% Similarity=0.194 Sum_probs=46.3
Q ss_pred HhhcccCchHHHHHhHH-HHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCcccccceeecccCCcccch
Q 021808 141 YLIDHFGRKKLALSSLA-GVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRG 219 (307)
Q Consensus 141 ~l~Dr~GrR~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~~R~ 219 (307)
.++||+-||..+..+.- +.+++.+++++.+....... +-.++.+..-. .+|..|.-++.|-+++-....+.-|
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~d---vP~~~~~~~S~---~~Fg~gllGisYGilSaSWD~~r~G 129 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVD---VPPWAVLLVSL---VFFGLGLLGISYGILSASWDPEREG 129 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccc---cCchHHHHHHH---HHHHHHHHhhhhhhcccccCCCCCC
Confidence 46889988877665532 23334444443333322111 11222222221 1223333446666777888888888
Q ss_pred hhhhHHHHHHHHHHH
Q 021808 220 ICGGMSATVNWISNL 234 (307)
Q Consensus 220 ~~~g~~~~~~~~~~~ 234 (307)
+..|+-..-.+.+..
T Consensus 130 SllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 130 SLLGWEEFKRNWGRM 144 (153)
T ss_pred CcccHHHHHHhHHHH
Confidence 888887766555443
No 262
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=78.61 E-value=0.4 Score=44.67 Aligned_cols=60 Identities=18% Similarity=0.057 Sum_probs=0.0
Q ss_pred hHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHH
Q 021808 106 SPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLL 166 (307)
Q Consensus 106 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~ 166 (307)
.+++-++.++++.+.. ++....-+..++..++..|+.+|-.|=+.+-.+.+++++..+++
T Consensus 26 lttiErRF~l~S~~~G-~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~ 85 (539)
T PF03137_consen 26 LTTIERRFGLSSSQSG-LISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLF 85 (539)
T ss_dssp -------------------------------------------------------------
T ss_pred HHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHH
Confidence 4566677788766544 44444555566777777888888544344445555555555444
No 263
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=77.40 E-value=19 Score=33.20 Aligned_cols=23 Identities=17% Similarity=0.130 Sum_probs=15.0
Q ss_pred HHHHHH-HHHHhhcccCchHHHHH
Q 021808 132 NAVGTI-VGIYLIDHFGRKKLALS 154 (307)
Q Consensus 132 ~~~~~~-~~~~l~Dr~GrR~~l~~ 154 (307)
-+.-+| +=+..+.|+|||+.-++
T Consensus 52 KlLWaPiVDs~y~~~~GRRKSWii 75 (544)
T PF13000_consen 52 KLLWAPIVDSVYSKRIGRRKSWII 75 (544)
T ss_pred HHhhhhhhhhhcccccCCcchhhh
Confidence 334333 33677889999997653
No 264
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=76.58 E-value=2.1 Score=39.09 Aligned_cols=45 Identities=18% Similarity=0.148 Sum_probs=26.7
Q ss_pred ceeecccCCcccchhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCc
Q 021808 206 WTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTG 250 (307)
Q Consensus 206 ~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (307)
.+..+|+..++..++..|+....+..+...++..-.......+..
T Consensus 410 ~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~ 454 (488)
T KOG2325|consen 410 DTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPR 454 (488)
T ss_pred HHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCcc
Confidence 355689999998888877766655555554433322233334433
No 265
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=76.52 E-value=17 Score=32.07 Aligned_cols=65 Identities=18% Similarity=0.018 Sum_probs=36.0
Q ss_pred cccccceeecccCCccc---chhhhhHHHHHHHHHHHHHHHhhHHHHHHhCCchhHHHHHHHHHHHHH
Q 021808 201 MGPVPWTLNSEVYPEQY---RGICGGMSATVNWISNLIVAQTFLTVAELVGTGATFLILAGIAVLAVV 265 (307)
Q Consensus 201 ~~~~~~~~~~ElfPt~~---R~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (307)
.=+....+.+++|+.+. |.++....+..-++|+.++....+.+.+..++...|.+..+.++++.+
T Consensus 50 ~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~ 117 (372)
T PF00854_consen 50 IKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALI 117 (372)
T ss_dssp CHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHH
Confidence 33444467789998774 333444555556667766655555555445544455555555555544
No 266
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=74.24 E-value=0.79 Score=39.43 Aligned_cols=24 Identities=8% Similarity=0.248 Sum_probs=2.4
Q ss_pred cccccceeecccCCcccchhhhhH
Q 021808 201 MGPVPWTLNSEVYPEQYRGICGGM 224 (307)
Q Consensus 201 ~~~~~~~~~~ElfPt~~R~~~~g~ 224 (307)
.++....+.++..+.+.|-.+..+
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~ 288 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSV 288 (309)
T ss_dssp --HHHH------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHH
Confidence 355566778888887777555443
No 267
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=72.39 E-value=81 Score=29.11 Aligned_cols=103 Identities=17% Similarity=0.074 Sum_probs=50.9
Q ss_pred HHHHHHHHHhhcccCch---HH----HHHhHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHhcCccccc
Q 021808 133 AVGTIVGIYLIDHFGRK---KL----ALSSLAGVIISLVLLSWAFISGSSASSSGVYGWIAVIGLALYIAFFAPGMGPVP 205 (307)
Q Consensus 133 ~~~~~~~~~l~Dr~GrR---~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (307)
++.+++...+..+.+|| +. +-.+...+++..+.+.+.......+. .....+..+....+. .+.-...+|+.
T Consensus 338 ii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~-~~~s~~~lil~y~l~-s~gEL~iSpvG 415 (498)
T COG3104 338 ILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPS-GLVSVWWLVLSYVLQ-SFGELFISPVG 415 (498)
T ss_pred HHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCcCHHHHHHHHHHH-HHHHHHhCHHH
Confidence 34555666666665444 21 12334444444444433322221111 112223333333333 33334456777
Q ss_pred ceeecccCCcccchhhhhHHHHHHHHHHHHHH
Q 021808 206 WTLNSEVYPEQYRGICGGMSATVNWISNLIVA 237 (307)
Q Consensus 206 ~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~ 237 (307)
-.+.+.+-|++..+...++-......+..+.+
T Consensus 416 Ls~~t~laP~~~~s~~ma~wfLt~a~~~~l~g 447 (498)
T COG3104 416 LSMVTKLAPPALKSFIMAMWFLTVAAGQTLGG 447 (498)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHhhc
Confidence 77888999998887777665555555555443
No 268
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=72.24 E-value=74 Score=28.60 Aligned_cols=52 Identities=21% Similarity=0.239 Sum_probs=27.5
Q ss_pred hcCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHH--HHHHHHhhc-----ccCchHHHH
Q 021808 96 FTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVG--TIVGIYLID-----HFGRKKLAL 153 (307)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~D-----r~GrR~~l~ 153 (307)
...+.... -.|.+++.-+.+-++.+.. ++.. -+- -++..-++| |+|||+.-+
T Consensus 44 GiP~GL~~-~iP~lL~ak~vSyt~~a~f-S~ay----~P~sLKllWaPiVDs~y~k~~GrrksWv 102 (510)
T KOG3574|consen 44 GIPLGLIG-AIPLLLQAKGVSYTSQAIF-SFAY----WPFSLKLLWAPIVDSVYSKRFGRRKSWV 102 (510)
T ss_pred CCchhHhh-hhHHHhcCCCcchhhhhhh-hhhh----hHHHHHHHHHhhhHHHHHHhhcccccee
Confidence 33444444 5688888666654443322 2111 111 134445566 999999754
No 269
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=71.56 E-value=25 Score=32.42 Aligned_cols=53 Identities=15% Similarity=0.154 Sum_probs=28.1
Q ss_pred hcCchhhHHhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Q 021808 96 FTGINTVMYYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGR 148 (307)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~Gr 148 (307)
..+++-+.+|.-.+.+....+.++..-..-.+....+.+..+.+|++-.++.|
T Consensus 275 ~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~ 327 (511)
T TIGR00806 275 SAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWAR 327 (511)
T ss_pred hhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchh
Confidence 34566666777777665544222111111222333466778888988555543
No 270
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=71.44 E-value=21 Score=32.02 Aligned_cols=30 Identities=20% Similarity=0.193 Sum_probs=18.7
Q ss_pred ceeecccCCcccchhhhhHHHHHHHHHHHH
Q 021808 206 WTLNSEVYPEQYRGICGGMSATVNWISNLI 235 (307)
Q Consensus 206 ~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~ 235 (307)
+..+.|-.|.+.|-.+.|.....-..|..+
T Consensus 357 F~~I~~~~~~~~REFslg~vsvsds~GI~l 386 (402)
T PF02487_consen 357 FYRISEEVPPEDREFSLGAVSVSDSLGILL 386 (402)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHhhHHHHH
Confidence 344567778899977776655544444433
No 271
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=68.45 E-value=28 Score=31.25 Aligned_cols=17 Identities=6% Similarity=0.215 Sum_probs=10.4
Q ss_pred HHHHHHHHHHhhcccCc
Q 021808 132 NAVGTIVGIYLIDHFGR 148 (307)
Q Consensus 132 ~~~~~~~~~~l~Dr~Gr 148 (307)
+++.-+++.++.+|+.-
T Consensus 72 ~l~~Kl~aP~fi~~v~y 88 (402)
T PF02487_consen 72 SLLVKLIAPFFIHRVPY 88 (402)
T ss_pred HHHHHHHhHhhhhhccc
Confidence 34445566778887753
No 272
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=66.45 E-value=99 Score=27.79 Aligned_cols=33 Identities=3% Similarity=-0.107 Sum_probs=21.5
Q ss_pred CcccccceeecccCCcccchhhhhHHHHHHHHH
Q 021808 200 GMGPVPWTLNSEVYPEQYRGICGGMSATVNWIS 232 (307)
Q Consensus 200 ~~~~~~~~~~~ElfPt~~R~~~~g~~~~~~~~~ 232 (307)
-...+...+.++..|++.+-.+..+...+-..|
T Consensus 359 Yltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~G 391 (406)
T KOG1479|consen 359 YLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGG 391 (406)
T ss_pred hHhhheehhcCCCCChHHHHHHHHHHHHHHHHH
Confidence 335566688899999998865555544444333
No 273
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=64.18 E-value=82 Score=27.92 Aligned_cols=58 Identities=14% Similarity=0.089 Sum_probs=31.4
Q ss_pred hcCchhhHHhhHHHHHHcCCCChHH-HHHHHHHHHHHHHHHHHHHHHhhcccCchHHHH
Q 021808 96 FTGINTVMYYSPTIVQMAGFQSNQL-ALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLAL 153 (307)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~ 153 (307)
..|++-+.+|.-.+-....-.+.+. .-..-......+.++.+.+|++--++.|+.-++
T Consensus 247 scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~l 305 (433)
T KOG3810|consen 247 SCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLL 305 (433)
T ss_pred hchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHH
Confidence 4566666777766665553211111 001112233346777888899977777765443
No 274
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=62.49 E-value=53 Score=27.94 Aligned_cols=24 Identities=21% Similarity=0.140 Sum_probs=16.7
Q ss_pred HHHHHHHHHhhcccCchHHHHHhH
Q 021808 133 AVGTIVGIYLIDHFGRKKLALSSL 156 (307)
Q Consensus 133 ~~~~~~~~~l~Dr~GrR~~l~~~~ 156 (307)
.....+.|-++||.|||+..+..+
T Consensus 86 mLFGtivgSLaDkqGRKracvtyc 109 (454)
T KOG4332|consen 86 MLFGTIVGSLADKQGRKRACVTYC 109 (454)
T ss_pred HHHHHHHHHHHhhhccccceeeeh
Confidence 344455567999999999765443
No 275
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=61.67 E-value=1.2e+02 Score=29.62 Aligned_cols=60 Identities=18% Similarity=0.063 Sum_probs=31.9
Q ss_pred HHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHHH
Q 021808 107 PTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLS 167 (307)
Q Consensus 107 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~~ 167 (307)
.++-++.+.++++...+ .-..-+...+...+..|..-|.-|=+.+-++.+.+++..++..
T Consensus 121 ttiErRF~i~Ss~sG~I-~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~a 180 (735)
T KOG3626|consen 121 TTIERRFKISSSQSGLI-ASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFA 180 (735)
T ss_pred hhhhhhcCCCCCcceeE-eeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHh
Confidence 34445666666553322 2222222445556667777777665555566666655555443
No 276
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=51.49 E-value=1.9e+02 Score=26.33 Aligned_cols=31 Identities=19% Similarity=-0.075 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCchHHHHHh
Q 021808 125 SLAVAGTNAVGTIVGIYLIDHFGRKKLALSS 155 (307)
Q Consensus 125 ~~~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~ 155 (307)
.+...+..++.++..|..+||..|.+..-.+
T Consensus 44 gl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~ 74 (432)
T PF06963_consen 44 GLVRSLSAILFGPWVGRWIDRSPRLKVIRTS 74 (432)
T ss_pred HHHHHHHHHHhhHHHHHHHhCCcchhhHHHH
Confidence 3344444566777788999999998876544
No 277
>PF00558 Vpu: Vpu protein; InterPro: IPR008187 The Human immunodeficiency virus 1 (HIV-1) Vpu protein acts in the degradation of CD4 in the endoplasmic reticulum and in the enhancement of virion release from the plasma membrane of infected cells [].; GO: 0019076 release of virus from host; PDB: 2JPX_A 1PI8_A 2GOH_A 2GOF_A 1PI7_A 1PJE_A 1VPU_A 2K7Y_A.
Probab=45.94 E-value=30 Score=23.04 Aligned_cols=24 Identities=25% Similarity=0.223 Sum_probs=13.3
Q ss_pred HHHHHHHh---hccCCCCCchhhHhhcc
Q 021808 280 LEVEQMWK---ERAWGSSLNTESLLEHG 304 (307)
Q Consensus 280 ~e~~~~~~---~~~~~~~~~~~~~~~~~ 304 (307)
.+++...+ ++. ++++|+...++|+
T Consensus 37 rkId~li~RIrera-EDSGnES~Gd~Ee 63 (81)
T PF00558_consen 37 RKIDRLIERIRERA-EDSGNESDGDEEE 63 (81)
T ss_dssp --CHHHHHHHHCTT-TCCHCTTTTCCHH
T ss_pred HhHHHHHHHHHccc-ccCCCCCCCcHHH
Confidence 44444443 333 6888887777665
No 278
>COG3817 Predicted membrane protein [Function unknown]
Probab=43.98 E-value=1.9e+02 Score=24.11 Aligned_cols=40 Identities=20% Similarity=0.387 Sum_probs=28.2
Q ss_pred hHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHhhccC
Q 021808 252 TFLILAGIAVLAVVFVILFVPETQGLTFLEVEQMWKERAW 291 (307)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~lpet~~~~l~e~~~~~~~~~~ 291 (307)
.+..++..++++.+...+..++|..+.++|.++..+.-+|
T Consensus 127 tl~al~i~~i~a~vla~~mt~~~p~~~~~E~~rl~d~v~w 166 (313)
T COG3817 127 TLMALGIAAIVATVLACVMTKQTPKAAVQEARRLMDQVSW 166 (313)
T ss_pred hHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHhhH
Confidence 4444555555555555666789999999998888877666
No 279
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=39.15 E-value=3.3e+02 Score=25.52 Aligned_cols=9 Identities=33% Similarity=0.453 Sum_probs=5.9
Q ss_pred hhhhcchhH
Q 021808 72 LDVFKSKEI 80 (307)
Q Consensus 72 ~~~~~~~~~ 80 (307)
.|.||.|+.
T Consensus 252 gDVFR~P~~ 260 (521)
T PF02990_consen 252 GDVFRPPKH 260 (521)
T ss_pred HHHhcCcCC
Confidence 467877764
No 280
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=37.41 E-value=1.5e+02 Score=23.28 Aligned_cols=37 Identities=11% Similarity=0.039 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhhcccCchHHHHHhHHHHHHHHHHH
Q 021808 130 GTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLL 166 (307)
Q Consensus 130 ~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~~~~~ 166 (307)
..++++.++..++..|++||....+...+.++.....
T Consensus 39 i~ali~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~ 75 (186)
T PF09605_consen 39 IAALICGIVYMLMVAKVPKRGAFLIMGIIMGLIFFLM 75 (186)
T ss_pred HHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHH
Confidence 3466778888899999999998876655555554443
No 281
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=35.79 E-value=35 Score=24.63 Aligned_cols=17 Identities=12% Similarity=0.192 Sum_probs=11.3
Q ss_pred HHHHHHHhccCCCChHH
Q 021808 9 AIIQFVLMLFMPESPRW 25 (307)
Q Consensus 9 ~~~~~~~~~~~pESp~w 25 (307)
.++.++.++.+|+-|..
T Consensus 53 ~~~Yi~l~~~lp~~P~~ 69 (118)
T PRK10697 53 LVAYIILSFALDPMPDN 69 (118)
T ss_pred HHHHHHHHHhccCCccc
Confidence 34456666778888854
No 282
>PF04647 AgrB: Accessory gene regulator B; InterPro: IPR006741 The accessory gene regulator (agr) of Staphylococcus aureus is the central regulatory system that controls the gene expression for a large set of virulence factors. The arg locus consists of two transcripts: RNAII and RNAIII. RNAII encodes four genes (agrA, B, C, and D) whose gene products assemble a quorum sensing system. At low cell density, the agr genes are continuously expressed at basal levels. A signal molecule, autoinducing peptide (AIP), produced and secreted by the bacteria, accumulates outside of the cells. When the cell density increases and the AIP concentration reaches a threshold, it activates the agr response, i.e. activation of secreted protein gene expression and subsequent repression of cell wall-associated protein genes. AgrB and AgrD are essential for the production of the autoinducing peptide which functions as a signal for quorum sensing. AgrB is a transmembrane protein [] involved in the proteolytic processing of AgrD, and may have both proteolytic and transporter activities, facilitating the export of the processed AgrD peptide []. ; GO: 0016020 membrane
Probab=34.60 E-value=51 Score=25.78 Aligned_cols=25 Identities=16% Similarity=0.486 Sum_probs=14.9
Q ss_pred HHHHHHHHHhhcc-CCCCCCHHHHHH
Q 021808 260 AVLAVVFVILFVP-ETQGLTFLEVEQ 284 (307)
Q Consensus 260 ~~~~~~~~~~~lp-et~~~~l~e~~~ 284 (307)
..++....+.+.| |+++|++++.|+
T Consensus 108 ~~~~~~~i~~~aPv~~~~kpl~~~e~ 133 (185)
T PF04647_consen 108 FIISFIIIIIYAPVDTPNKPLDSEEK 133 (185)
T ss_pred HHHHHHHHHHhcccccccCcCChHHH
Confidence 3344444455666 788998855443
No 283
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=32.96 E-value=4.1e+02 Score=24.75 Aligned_cols=32 Identities=19% Similarity=0.319 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHhhcccCchHHHHHhHHHHHHH
Q 021808 131 TNAVGTIVGIYLIDHFGRKKLALSSLAGVIIS 162 (307)
Q Consensus 131 ~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~~ 162 (307)
+.++..++++.+.+|+|-+...++.=..+.+.
T Consensus 331 vtii~~~l~~~iir~~GW~~~AlitPiv~lit 362 (491)
T PF03219_consen 331 VTIIMMFLSSNIIRRFGWRTAALITPIVILIT 362 (491)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHH
Confidence 34444577788999999988776653333333
No 284
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=32.93 E-value=3e+02 Score=23.19 Aligned_cols=19 Identities=26% Similarity=0.281 Sum_probs=13.5
Q ss_pred ccchhhhhcchhHHHHHHH
Q 021808 68 TVRYLDVFKSKEIRLAFLA 86 (307)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~ 86 (307)
+.+..+.+|++..+...+.
T Consensus 84 ~~s~~~~LK~K~tw~w~~~ 102 (267)
T PF07672_consen 84 KPSYKSILKEKETWKWILI 102 (267)
T ss_pred cchHHHHHccchHHHHHHH
Confidence 4567888998887765443
No 285
>COG2119 Predicted membrane protein [Function unknown]
Probab=32.14 E-value=2e+02 Score=22.71 Aligned_cols=31 Identities=6% Similarity=0.177 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHhhcccCchHHHHHhHH
Q 021808 127 AVAGTNAVGTIVGIYLIDHFGRKKLALSSLA 157 (307)
Q Consensus 127 ~~~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~ 157 (307)
....++.++.+.+.++++|+--|.+..++.+
T Consensus 142 g~~l~s~laVl~G~~ia~ki~~r~l~~~aal 172 (190)
T COG2119 142 GMILASVLAVLLGKLIAGKLPERLLRFIAAL 172 (190)
T ss_pred HHHHHHHHHHHHHHHHHccCCHHHHHHHHHH
Confidence 3344567777888899999999988765543
No 286
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=31.51 E-value=16 Score=31.40 Aligned_cols=10 Identities=70% Similarity=1.404 Sum_probs=8.3
Q ss_pred ccCCCChHHH
Q 021808 17 LFMPESPRWL 26 (307)
Q Consensus 17 ~~~pESp~wL 26 (307)
+.|||||||-
T Consensus 202 LsmPhSPRWh 211 (335)
T TIGR03032 202 LSMPHSPRWY 211 (335)
T ss_pred ccCCcCCcEe
Confidence 4699999994
No 287
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=31.08 E-value=52 Score=22.76 Aligned_cols=19 Identities=32% Similarity=0.415 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHhhcccCch
Q 021808 131 TNAVGTIVGIYLIDHFGRK 149 (307)
Q Consensus 131 ~~~~~~~~~~~l~Dr~GrR 149 (307)
...+.+.+.|++.||..||
T Consensus 87 ~~l~va~v~g~l~~~~r~~ 105 (105)
T PF13493_consen 87 VFLVVALVTGYLADRYRRQ 105 (105)
T ss_dssp HHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHhhC
Confidence 4566778889999999886
No 288
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=30.52 E-value=63 Score=27.31 Aligned_cols=48 Identities=25% Similarity=0.234 Sum_probs=31.7
Q ss_pred HhhHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHH---------hhcccCchHHH
Q 021808 104 YYSPTIVQMAGFQSNQLALLLSLAVAGTNAVGTIVGIY---------LIDHFGRKKLA 152 (307)
Q Consensus 104 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---------l~Dr~GrR~~l 152 (307)
.|+..+++..|.++.+.+ ...+..-+...+..++.|. =.||+|||...
T Consensus 38 TYlllfltqiglsp~~~A-mlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 38 TYLLLFLTQIGLSPSSRA-MLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred HHHHHHHHHhcCCcchhH-HHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 355556677888777655 4455555556677777653 36899999753
No 289
>smart00793 AgrB Accessory gene regulator B. The accessory gene regulator (agr) of Staphylococcus aureus is the central regulatory system that controls the gene expression for a large set of virulence factors. The arg locus consists of two transcripts: RNAII and RNAIII. RNAII encodes four genes (agrA, B, C, and D) whose gene products assemble a quorum sensing system. At low cell density, the agr genes are continuously expressed at basal levels. A signal molecule, autoinducing peptide (AIP), produced and secreted by the bacteria, accumulates outside of the cells. When the cell density increases and the AIP concentration reaches a threshold, it activates the agr response, i.e. activation of secreted protein gene expression and subsequent repression of cell wall-associated protein genes. AgrB and AgrD are essential for the production of the autoinducing peptide which functions as a signal for quorum sensing. AgrB is a transmembrane protein PUBMED:11195102. AgrB is involved in the proteolyt
Probab=29.60 E-value=93 Score=24.44 Aligned_cols=24 Identities=13% Similarity=0.483 Sum_probs=14.7
Q ss_pred HHHHHHHHhhcc-CCCCCCHHHHHH
Q 021808 261 VLAVVFVILFVP-ETQGLTFLEVEQ 284 (307)
Q Consensus 261 ~~~~~~~~~~lp-et~~~~l~e~~~ 284 (307)
.++.+..+.+.| ||+++++++.|+
T Consensus 109 i~s~~~i~~~APv~~~~kpi~~~e~ 133 (184)
T smart00793 109 LIGLVLIYIYAPADTEKQPVIPEKL 133 (184)
T ss_pred HHHHHHHHhcCCcccccCCCCCHHH
Confidence 344444556666 888888765444
No 290
>PF14887 HMG_box_5: HMG (high mobility group) box 5; PDB: 1L8Y_A 1L8Z_A 2HDZ_A.
Probab=29.11 E-value=1.7e+02 Score=19.27 Aligned_cols=16 Identities=19% Similarity=0.499 Sum_probs=9.1
Q ss_pred cCCHHHHHHHHHHhcC
Q 021808 29 KSDKEKAILVLSKIYD 44 (307)
Q Consensus 29 ~~~~~~a~~~l~~~~~ 44 (307)
+.++.++..++.+-+.
T Consensus 27 ~~dr~K~~kam~~~W~ 42 (85)
T PF14887_consen 27 RNDRKKALKAMEAQWS 42 (85)
T ss_dssp TSTHHHHHHHHHHHHH
T ss_pred hHhHHHHHHHHHHHHH
Confidence 4556666666655543
No 291
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=29.11 E-value=87 Score=23.46 Aligned_cols=15 Identities=20% Similarity=0.259 Sum_probs=11.6
Q ss_pred cccCCcccchhhhhH
Q 021808 210 SEVYPEQYRGICGGM 224 (307)
Q Consensus 210 ~ElfPt~~R~~~~g~ 224 (307)
.|+||+..|....+.
T Consensus 59 kDm~Pp~~R~~i~~~ 73 (145)
T TIGR00986 59 KDIVPPTTRGWIYHK 73 (145)
T ss_pred HhhCCHHHHHHHHHH
Confidence 699999999655444
No 292
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=28.37 E-value=1.1e+02 Score=22.73 Aligned_cols=16 Identities=13% Similarity=0.389 Sum_probs=12.3
Q ss_pred cccCCcccchhhhhHH
Q 021808 210 SEVYPEQYRGICGGMS 225 (307)
Q Consensus 210 ~ElfPt~~R~~~~g~~ 225 (307)
.|+||+..|....+..
T Consensus 61 kdi~P~~~R~~i~~~~ 76 (137)
T PF04281_consen 61 KDIFPPSVRNWISSTV 76 (137)
T ss_pred hccCCHHHHHHHHHHH
Confidence 6999999997655443
No 293
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=26.85 E-value=2.2e+02 Score=19.76 Aligned_cols=27 Identities=22% Similarity=0.206 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHhhcccCchHHHHH
Q 021808 128 VAGTNAVGTIVGIYLIDHFGRKKLALS 154 (307)
Q Consensus 128 ~~~~~~~~~~~~~~l~Dr~GrR~~l~~ 154 (307)
......++..+.+.+.|..|.|.....
T Consensus 96 ~~~g~~~~~~~~~~~~~~~~~~~~~~~ 122 (141)
T TIGR00880 96 IALGPLLGPPLGGVLAQFLGWRAPFLF 122 (141)
T ss_pred HHHHHHHhHHhHHHHhcccchHHHHHH
Confidence 334456667777888888877665543
No 294
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=26.29 E-value=21 Score=29.95 Aligned_cols=13 Identities=15% Similarity=0.498 Sum_probs=0.0
Q ss_pred HHHHhhccCCCCC
Q 021808 265 VFVILFVPETQGL 277 (307)
Q Consensus 265 ~~~~~~lpet~~~ 277 (307)
++++.+..++++.
T Consensus 179 iLIWlY~H~~~~~ 191 (381)
T PF05297_consen 179 ILIWLYVHDQRHA 191 (381)
T ss_dssp -------------
T ss_pred HHHHHHhcCCCCC
Confidence 3456667777643
No 295
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=25.67 E-value=3.9e+02 Score=23.53 Aligned_cols=13 Identities=31% Similarity=0.368 Sum_probs=6.1
Q ss_pred HHHHHHHHhhccc
Q 021808 134 VGTIVGIYLIDHF 146 (307)
Q Consensus 134 ~~~~~~~~l~Dr~ 146 (307)
....+.||+..|.
T Consensus 10 ~~ii~~G~~~~~~ 22 (385)
T PF03547_consen 10 FLIILLGYLLGRF 22 (385)
T ss_pred HHHHHHHHHHHHh
Confidence 3334445555544
No 296
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=25.66 E-value=5.5e+02 Score=23.95 Aligned_cols=37 Identities=14% Similarity=0.061 Sum_probs=25.3
Q ss_pred ccceeecccCCcccchhhhhHHHHHHHHHHHHHHHhh
Q 021808 204 VPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTF 240 (307)
Q Consensus 204 ~~~~~~~ElfPt~~R~~~~g~~~~~~~~~~~~~~~~~ 240 (307)
+.|....|++.++.=.+..++....++++.++++...
T Consensus 168 lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~ 204 (509)
T COG3202 168 LFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVT 204 (509)
T ss_pred HHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 4566778888877766677777777776666655443
No 297
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=24.20 E-value=1.7e+02 Score=26.75 Aligned_cols=13 Identities=15% Similarity=0.194 Sum_probs=7.3
Q ss_pred HHHHHHHHHHhhc
Q 021808 132 NAVGTIVGIYLID 144 (307)
Q Consensus 132 ~~~~~~~~~~l~D 144 (307)
....+++.||.+.
T Consensus 336 YAlTs~i~GY~~g 348 (593)
T KOG1277|consen 336 YALTSPINGYVSG 348 (593)
T ss_pred HHhcccccccccc
Confidence 4555666666544
No 298
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=24.14 E-value=98 Score=25.86 Aligned_cols=20 Identities=20% Similarity=0.257 Sum_probs=13.6
Q ss_pred HHHHhhcccCchHHHHHhHH
Q 021808 138 VGIYLIDHFGRKKLALSSLA 157 (307)
Q Consensus 138 ~~~~l~Dr~GrR~~l~~~~~ 157 (307)
.+-+++.|+.-|.+.+++.+
T Consensus 259 gGk~lAskIS~rtVt~~ggi 278 (294)
T KOG2881|consen 259 GGKYLASKISVRTVTLIGGI 278 (294)
T ss_pred hhHHHhhhheeEEEEEecch
Confidence 33478888888877665543
No 299
>TIGR02185 Trep_Strep conserved hypothetical integral membrane protein TIGR02185. This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C-terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae R6.
Probab=23.65 E-value=2.6e+02 Score=22.04 Aligned_cols=33 Identities=6% Similarity=-0.057 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHhhcccCchHHHHHhHHHHHH
Q 021808 129 AGTNAVGTIVGIYLIDHFGRKKLALSSLAGVII 161 (307)
Q Consensus 129 ~~~~~~~~~~~~~l~Dr~GrR~~l~~~~~~~~~ 161 (307)
....+++.++..++..|++||..+.+...+.++
T Consensus 40 ~i~al~~g~vyml~~~KV~K~G~~~i~~~i~gl 72 (189)
T TIGR02185 40 GITAFLVGIIFFLMVAKVPKRGVIFIFGILLGL 72 (189)
T ss_pred HHHHHHHhHHHhhhhhhcCCccHHHHHHHHHHH
Confidence 334567777788999999999987665444433
No 300
>PF13428 TPR_14: Tetratricopeptide repeat
Probab=21.98 E-value=1.3e+02 Score=16.85 Aligned_cols=20 Identities=15% Similarity=0.064 Sum_probs=15.0
Q ss_pred HHHHhcCCHHHHHHHHHHhc
Q 021808 24 RWLFMKSDKEKAILVLSKIY 43 (307)
Q Consensus 24 ~wL~~~~~~~~a~~~l~~~~ 43 (307)
+.+...|+.++|.+.+++..
T Consensus 9 ~~~~~~G~~~~A~~~~~~~l 28 (44)
T PF13428_consen 9 RAYRRLGQPDEAERLLRRAL 28 (44)
T ss_pred HHHHHcCCHHHHHHHHHHHH
Confidence 45667899999988877653
No 301
>PF12854 PPR_1: PPR repeat
Probab=21.63 E-value=1.1e+02 Score=16.20 Aligned_cols=16 Identities=6% Similarity=0.123 Sum_probs=12.0
Q ss_pred HHhcCCHHHHHHHHHH
Q 021808 26 LFMKSDKEKAILVLSK 41 (307)
Q Consensus 26 L~~~~~~~~a~~~l~~ 41 (307)
+...|+.++|.+++..
T Consensus 17 ~Ck~G~~~~A~~l~~~ 32 (34)
T PF12854_consen 17 YCKAGRVDEAFELFDE 32 (34)
T ss_pred HHHCCCHHHHHHHHHh
Confidence 4567889999887754
No 302
>PF00672 HAMP: HAMP domain; InterPro: IPR003660 The HAMP linker domain (present in Histidine kinases, Adenyl cyclases, Methyl-accepting proteins and Phosphatases) is an approximately 50-amino acid alpha-helical region. It is found in bacterial sensor and chemotaxis proteins and in eukaryotic histidine kinases. The bacterial proteins are usually integral membrane proteins and part of a two-component signal transduction pathway. One or several copies of the HAMP domain can be found in association with other domains, such as the histidine kinase domain, the bacterial chemotaxis sensory transducer domain, the PAS repeat, the EAL domain, the GGDEF domain, the protein phosphatase 2C-like domain, the guanylate cyclase domain, or the response regulatory domain. It has been suggested that the HAMP domain possesses a role of regulating the phosphorylation or methylation of homodimeric receptors by transmitting the conformational changes in periplasmic ligand-binding domains to cytoplasmic signalling kinase and methyl-acceptor domains.; GO: 0004871 signal transducer activity, 0007165 signal transduction, 0016021 integral to membrane; PDB: 3PJX_A 3PJW_A 3ZX6_B 2Y20_B 2Y0Q_D 2Y21_H 3ZRW_C 2L7H_B 2LFS_B 2L7I_B ....
Probab=20.89 E-value=2.1e+02 Score=17.65 Aligned_cols=24 Identities=4% Similarity=0.041 Sum_probs=15.0
Q ss_pred HHhhccCCCCCCHHHHHHHHhhcc
Q 021808 267 VILFVPETQGLTFLEVEQMWKERA 290 (307)
Q Consensus 267 ~~~~lpet~~~~l~e~~~~~~~~~ 290 (307)
..+++-..-.+++.++.+..+.-.
T Consensus 15 ~~~~~~~~i~~pl~~l~~~~~~i~ 38 (70)
T PF00672_consen 15 LAWLLARRITRPLRRLSDAMQRIA 38 (70)
T ss_dssp HHHH--HTTCCCHHHHHHHCCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777888888887766543
No 303
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=20.16 E-value=6e+02 Score=22.29 Aligned_cols=31 Identities=29% Similarity=0.363 Sum_probs=13.7
Q ss_pred HHHHHHHHHHhhcccCchHHH-HHhHHHHHHH
Q 021808 132 NAVGTIVGIYLIDHFGRKKLA-LSSLAGVIIS 162 (307)
Q Consensus 132 ~~~~~~~~~~l~Dr~GrR~~l-~~~~~~~~~~ 162 (307)
..+....-=++.++..|.-.+ ..|..+..++
T Consensus 180 ya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~ 211 (334)
T PF06027_consen 180 YAVSNVLEEKLVKKAPRVEFLGMLGLFGFIIS 211 (334)
T ss_pred HHHHHHHHHHhcccCCHHHHHHHHHHHHHHHH
Confidence 334444444566665544333 3334444333
Done!