Your job contains 1 sequence.
>021811
MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD
DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK
GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNVKQKKV
KSKEKKPYTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKRKRD
AAFIPPEEPSRQNSCEAEDKTNDVAAMAKSLKEKAKKLRKQKFAENINPEEYIAASGEKP
SKKKKSK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021811
(307 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2150818 - symbol:AT5G08420 species:3702 "Arabi... 773 1.2e-87 2
UNIPROTKB|G4N4Y1 - symbol:MGG_06049 "KRR1 small subunit p... 627 3.3e-67 2
POMBASE|SPBC25B2.05 - symbol:mis3 "rRNA processing protei... 634 6.8e-67 2
ASPGD|ASPL0000001309 - symbol:AN5875 species:162425 "Emer... 624 7.7e-66 2
SGD|S000000564 - symbol:KRR1 "Nucleolar protein required ... 639 1.6e-65 2
CGD|CAL0001053 - symbol:KRR1 species:5476 "Candida albica... 628 2.9e-64 2
UNIPROTKB|F1SGD9 - symbol:KRR1 "KRR1 small subunit proces... 574 2.3e-60 2
MGI|MGI:1289274 - symbol:Krr1 "KRR1, small subunit (SSU) ... 572 2.3e-60 2
UNIPROTKB|Q13601 - symbol:KRR1 "KRR1 small subunit proces... 573 3.8e-60 2
UNIPROTKB|Q3B7L9 - symbol:KRR1 "KRR1 small subunit proces... 574 6.1e-60 2
RGD|1306183 - symbol:Krr1 "KRR1, small subunit (SSU) proc... 573 7.8e-60 2
UNIPROTKB|F1N9P9 - symbol:KRR1 "KRR1 small subunit proces... 574 1.3e-59 2
UNIPROTKB|E2R869 - symbol:KRR1 "KRR1 small subunit proces... 570 1.6e-59 2
FB|FBgn0020305 - symbol:dbe "dribble" species:7227 "Droso... 564 2.6e-59 2
DICTYBASE|DDB_G0280805 - symbol:DDB_G0280805 "ribosomal R... 587 3.3e-59 2
ZFIN|ZDB-GENE-060623-10 - symbol:krr1 "KRR1, small subuni... 577 5.4e-59 2
WB|WBGene00015461 - symbol:C05C8.2 species:6239 "Caenorha... 522 2.9e-52 2
>TAIR|locus:2150818 [details] [associations]
symbol:AT5G08420 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR004087 SMART:SM00322 EMBL:CP002688 GO:GO:0005730
GO:GO:0003723 GO:GO:0030529 GO:GO:0006364 EMBL:AL392174 KO:K06961
OMA:ALMIKRE InterPro:IPR024166 PANTHER:PTHR12581 PIRSF:PIRSF006515
EMBL:AF370282 EMBL:AY142563 IPI:IPI00545754 RefSeq:NP_196459.1
UniGene:At.10143 ProteinModelPortal:Q9FT93 STRING:Q9FT93
PRIDE:Q9FT93 EnsemblPlants:AT5G08420.1 GeneID:830741
KEGG:ath:AT5G08420 TAIR:At5g08420 InParanoid:Q9FT93
PhylomeDB:Q9FT93 ProtClustDB:CLSN2687289 ArrayExpress:Q9FT93
Genevestigator:Q9FT93 Uniprot:Q9FT93
Length = 391
Score = 773 (277.2 bits), Expect = 1.2e-87, Sum P(2) = 1.2e-87
Identities = 150/167 (89%), Positives = 161/167 (96%)
Query: 2 VKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILDD 61
V+ ALKEYGV+C+LNLVEGSMTVSTTRKTRDPYIIVKARDLI+LLSRSVPAPQAIKIL+D
Sbjct: 78 VESALKEYGVACKLNLVEGSMTVSTTRKTRDPYIIVKARDLIKLLSRSVPAPQAIKILED 137
Query: 62 EMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKG 121
E+QCDIIKIGNLVRNKERFVKRRQ LVGPNSSTLKALEILT CYILVQG+TVAAMG FKG
Sbjct: 138 EVQCDIIKIGNLVRNKERFVKRRQRLVGPNSSTLKALEILTNCYILVQGSTVAAMGPFKG 197
Query: 122 LKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLP 168
LKQ+RRIVEDC+QN MHPVYHIK LM+KKELEKDPALANE+WDRFLP
Sbjct: 198 LKQLRRIVEDCVQNIMHPVYHIKTLMMKKELEKDPALANESWDRFLP 244
Score = 122 (48.0 bits), Expect = 1.2e-87, Sum P(2) = 1.2e-87
Identities = 32/94 (34%), Positives = 39/94 (41%)
Query: 204 LESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXXRKRDAAFIPPEEPSRQNSC--EAEDKT 261
LESGEYF+S RKRDA+F+PPEEP NS ++ED
Sbjct: 280 LESGEYFMSDKKKSEKKWQEKQEKQSEKSTENKRKRDASFLPPEEPMNNNSNANKSEDGK 339
Query: 262 NDVXXXXXXXXXXXXXXXXXXXX-ENINPEEYIA 294
ND+ E +N EEYIA
Sbjct: 340 NDITELTNSLKSKTKELKKQKKTHERVNAEEYIA 373
>UNIPROTKB|G4N4Y1 [details] [associations]
symbol:MGG_06049 "KRR1 small subunit processome component"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR004087 SMART:SM00322
GO:GO:0005730 EMBL:CM001233 GO:GO:0003723 GO:GO:0030686
GO:GO:0032040 GO:GO:0000447 KO:K06961 InterPro:IPR024166
PANTHER:PTHR12581 PIRSF:PIRSF006515 RefSeq:XP_003711900.1
ProteinModelPortal:G4N4Y1 EnsemblFungi:MGG_06049T0 GeneID:2683926
KEGG:mgr:MGG_06049 Uniprot:G4N4Y1
Length = 320
Score = 627 (225.8 bits), Expect = 3.3e-67, Sum P(2) = 3.3e-67
Identities = 122/168 (72%), Positives = 145/168 (86%)
Query: 1 MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
+V AL++YG++ L+LVEGSMTV TTRKT DP I+ ARDLI+LL+RSVPAPQAIKIL+
Sbjct: 58 LVTKALEKYGIATTLDLVEGSMTVKTTRKTFDPAAILNARDLIKLLARSVPAPQAIKILE 117
Query: 61 DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
D + CDIIKI NLVRNKERF+KRRQ ++GPN STLKALE+LT YILV GNTV+AMG +K
Sbjct: 118 DGVACDIIKIRNLVRNKERFIKRRQRILGPNGSTLKALELLTSTYILVHGNTVSAMGPYK 177
Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLP 168
GLK+VRR+VEDCM N +HP+Y IK LMVK+EL KDPALANE+WDRFLP
Sbjct: 178 GLKEVRRVVEDCMNN-VHPIYLIKELMVKRELAKDPALANESWDRFLP 224
Score = 74 (31.1 bits), Expect = 3.3e-67, Sum P(2) = 3.3e-67
Identities = 16/49 (32%), Positives = 20/49 (40%)
Query: 204 LESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXXRKRDAAFIPPEEPSRQ 252
+ESGEYFL R+R+ F+PPEEP Q
Sbjct: 264 IESGEYFLGKEAKKRAAETERQEQAKVKKEERKREREKDFVPPEEPGTQ 312
>POMBASE|SPBC25B2.05 [details] [associations]
symbol:mis3 "rRNA processing protein Mis3" species:4896
"Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=IMP]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IMP]
[GO:0032040 "small-subunit processome" evidence=ISO]
InterPro:IPR004087 PROSITE:PS50084 SMART:SM00322
PomBase:SPBC25B2.05 GO:GO:0007346 GO:GO:0005730 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0006364 GO:GO:0032040
eggNOG:COG1094 HOGENOM:HOG000116208 KO:K06961 OMA:ALMIKRE
InterPro:IPR024166 PANTHER:PTHR12581 PIRSF:PIRSF006515
EMBL:AB030208 PIR:T39981 RefSeq:NP_596073.1
ProteinModelPortal:O74777 STRING:O74777 EnsemblFungi:SPBC25B2.05.1
GeneID:2540544 KEGG:spo:SPBC25B2.05 OrthoDB:EOG40S3QM
NextBio:20801670 Uniprot:O74777
Length = 327
Score = 634 (228.2 bits), Expect = 6.8e-67, Sum P(2) = 6.8e-67
Identities = 120/167 (71%), Positives = 142/167 (85%)
Query: 2 VKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILDD 61
V AL ++G++C L+LVEGSMTV TTRKT DPY I+ ARDLI+LL+RSVP PQA+KI+ D
Sbjct: 73 VTRALDKFGITCVLDLVEGSMTVKTTRKTFDPYSILDARDLIKLLARSVPFPQAVKIMQD 132
Query: 62 EMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKG 121
+ CDIIKIGN++RNKERFVKRRQ L+G N TLKALE+LT CYILVQG TVA MG +KG
Sbjct: 133 GVACDIIKIGNILRNKERFVKRRQRLIGTNGQTLKALELLTQCYILVQGTTVAVMGGYKG 192
Query: 122 LKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLP 168
LK+VRRIVEDCM N +HP+YHIK LM+K+EL KDP LANE+WDRFLP
Sbjct: 193 LKEVRRIVEDCMHN-IHPIYHIKELMIKRELAKDPTLANESWDRFLP 238
Score = 64 (27.6 bits), Expect = 6.8e-67, Sum P(2) = 6.8e-67
Identities = 16/49 (32%), Positives = 21/49 (42%)
Query: 204 LESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXXRKRDAAFIPPEEPSRQ 252
+ESGEYFL ++R AFIPPEE S++
Sbjct: 275 IESGEYFLKKEEKERKKRAEKKEQQKEKKKEKEKERMKAFIPPEESSKK 323
>ASPGD|ASPL0000001309 [details] [associations]
symbol:AN5875 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IEA] [GO:0000447 "endonucleolytic
cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] InterPro:IPR004087 SMART:SM00322 GO:GO:0005730
GO:GO:0003723 EMBL:BN001301 GO:GO:0030686 GO:GO:0032040
GO:GO:0000447 HOGENOM:HOG000116208 OMA:ALMIKRE InterPro:IPR024166
PANTHER:PTHR12581 PIRSF:PIRSF006515 EnsemblFungi:CADANIAT00007161
Uniprot:C8UZX9
Length = 358
Score = 624 (224.7 bits), Expect = 7.7e-66, Sum P(2) = 7.7e-66
Identities = 120/168 (71%), Positives = 145/168 (86%)
Query: 1 MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
+V AL+++G++C L+LVEGSMTV TTRKT DP I+KARDLI+LLSRSVP QA+KIL+
Sbjct: 58 VVTRALEKHGIACTLDLVEGSMTVKTTRKTYDPAAILKARDLIKLLSRSVPVQQALKILE 117
Query: 61 DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
D + CDIIKI N VRNKERFVKRRQ ++GP STLKALE+LTG YILVQGNTV+AMG +K
Sbjct: 118 DGVACDIIKIRNQVRNKERFVKRRQRILGPQGSTLKALELLTGTYILVQGNTVSAMGPYK 177
Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLP 168
GLK+VRRIV+DCM N +HP+YHIK LM+K+EL KDP LA+E+WDRFLP
Sbjct: 178 GLKEVRRIVDDCMAN-IHPIYHIKELMIKRELAKDPTLAHESWDRFLP 224
Score = 64 (27.6 bits), Expect = 7.7e-66, Sum P(2) = 7.7e-66
Identities = 16/57 (28%), Positives = 22/57 (38%)
Query: 204 LESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXXRKRDAAFIPPEEPSRQNSCEAEDK 260
+ESGEYFLS ++R+ AF+ PEE + E K
Sbjct: 264 IESGEYFLSKEAKERAQKEEVMERQRIKREEKMKEREKAFVAPEELEETEKAKKEKK 320
>SGD|S000000564 [details] [associations]
symbol:KRR1 "Nucleolar protein required for rRNA synthesis
and ribosomal assembly" species:4932 "Saccharomyces cerevisiae"
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0042274 "ribosomal
small subunit biogenesis" evidence=IMP] [GO:0003674
"molecular_function" evidence=ND] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR004087 PROSITE:PS50084
SMART:SM00322 SGD:S000000564 GO:GO:0005730 EMBL:X59720
EMBL:BK006937 GO:GO:0003723 GO:GO:0030686 GO:GO:0032040
GO:GO:0000447 eggNOG:COG1094 GeneTree:ENSGT00390000018775
HOGENOM:HOG000116208 KO:K06961 OMA:ALMIKRE InterPro:IPR024166
PANTHER:PTHR12581 PIRSF:PIRSF006515 OrthoDB:EOG40S3QM EMBL:AY692923
PIR:S19389 RefSeq:NP_009872.1 ProteinModelPortal:P25586
DIP:DIP-1408N IntAct:P25586 MINT:MINT-397054 STRING:P25586
PaxDb:P25586 PeptideAtlas:P25586 EnsemblFungi:YCL059C GeneID:850298
KEGG:sce:YCL059C CYGD:YCL059c NextBio:965673 Genevestigator:P25586
GermOnline:YCL059C Uniprot:P25586
Length = 316
Score = 639 (230.0 bits), Expect = 1.6e-65, Sum P(2) = 1.6e-65
Identities = 122/167 (73%), Positives = 144/167 (86%)
Query: 2 VKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILDD 61
V AL ++ ++C L+LVEGSMTV TTRKT DP II+KARDLI+LL+RSVP PQA+KIL D
Sbjct: 60 VTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQD 119
Query: 62 EMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKG 121
+M CD+IKIGN V NKERFVKRRQ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKG
Sbjct: 120 DMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKG 179
Query: 122 LKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLP 168
LK+VRR+VEDCM+N +HP+YHIK LM+K+EL K P LANE+W RFLP
Sbjct: 180 LKEVRRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLP 225
Score = 46 (21.3 bits), Expect = 1.6e-65, Sum P(2) = 1.6e-65
Identities = 14/45 (31%), Positives = 16/45 (35%)
Query: 204 LESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXXRKRDAAFIPPEE 248
+ESGEYFLS +R FI PEE
Sbjct: 264 IESGEYFLSKREKQMKKLNEQKEKQMEREIERQEERAKDFIAPEE 308
>CGD|CAL0001053 [details] [associations]
symbol:KRR1 species:5476 "Candida albicans" [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR004087 SMART:SM00322
CGD:CAL0001053 GO:GO:0005730 GO:GO:0003723 GO:GO:0030529
GO:GO:0006364 EMBL:AACQ01000117 EMBL:AACQ01000116 eggNOG:COG1094
HOGENOM:HOG000116208 KO:K06961 InterPro:IPR024166 PANTHER:PTHR12581
PIRSF:PIRSF006515 RefSeq:XP_713795.1 RefSeq:XP_713834.1
ProteinModelPortal:Q59W63 STRING:Q59W63 GeneID:3644522
GeneID:3644542 KEGG:cal:CaO19.661 KEGG:cal:CaO19.8277
Uniprot:Q59W63
Length = 358
Score = 628 (226.1 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
Identities = 118/167 (70%), Positives = 145/167 (86%)
Query: 2 VKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILDD 61
V AL ++ + CEL+LVEGSMTV TT KT DP +I+KARDLI+LL+RSVP PQA+KIL D
Sbjct: 60 VTKALDKHFIKCELDLVEGSMTVKTTTKTFDPAMIIKARDLIKLLARSVPFPQAVKILQD 119
Query: 62 EMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKG 121
++ CD+IKIGN V NK+RF+KRRQ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKG
Sbjct: 120 DIACDVIKIGNFVANKDRFIKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKG 179
Query: 122 LKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLP 168
LK+VRR+VEDCM+N +HP+Y+IK LM+K+EL K+PALANE+W RFLP
Sbjct: 180 LKEVRRVVEDCMKN-IHPIYYIKELMIKQELSKNPALANEDWSRFLP 225
Score = 45 (20.9 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
Identities = 14/57 (24%), Positives = 20/57 (35%)
Query: 204 LESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXXRKRDAAFIPPEEPSRQNSCEAEDK 260
+ESGEYFL ++R F PEE +N ++K
Sbjct: 264 IESGEYFLGKKEKELKKLQEKRSKQEEVSETKRQERAKDFEAPEEEVYENKLLKKEK 320
>UNIPROTKB|F1SGD9 [details] [associations]
symbol:KRR1 "KRR1 small subunit processome component"
species:9823 "Sus scrofa" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
SMART:SM00322 GO:GO:0005730 GO:GO:0003723 GO:GO:0030529
GO:GO:0006364 CTD:11103 GeneTree:ENSGT00390000018775 KO:K06961
OMA:ALMIKRE InterPro:IPR024166 PANTHER:PTHR12581 PIRSF:PIRSF006515
EMBL:CU694568 RefSeq:XP_003126436.1 UniGene:Ssc.51480
Ensembl:ENSSSCT00000000562 GeneID:100523737 KEGG:ssc:100523737
Uniprot:F1SGD9
Length = 375
Score = 574 (207.1 bits), Expect = 2.3e-60, Sum P(2) = 2.3e-60
Identities = 108/168 (64%), Positives = 142/168 (84%)
Query: 1 MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
+V+ AL E+ V+ L+L+EGSMTV TT+KT DPYII++ARDLI+LL+RSV QA++IL
Sbjct: 72 LVQKALNEHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQ 131
Query: 61 DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
D++ CDIIKIG+LVRNKERFVKRRQ L+GP STLKALE+LT CYI+VQGNTV+A+G F
Sbjct: 132 DDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFS 191
Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLP 168
GLK+VR++V D M+N +HP+Y+IK LM+K+EL KD L +++W+RFLP
Sbjct: 192 GLKEVRKVVLDTMKN-IHPIYNIKTLMIKRELAKDSELRSQSWERFLP 238
Score = 62 (26.9 bits), Expect = 2.3e-60, Sum P(2) = 2.3e-60
Identities = 19/62 (30%), Positives = 23/62 (37%)
Query: 204 LESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXXRKRDAAFIPPEEPSRQNSCEAEDKTN- 262
L SGEYFL +R+ AFIPP+E EA +T
Sbjct: 276 LASGEYFLKSSQKKRQKMEAIKAKQAEALSKRQEERNKAFIPPKEKPVVKPKEASTETKI 335
Query: 263 DV 264
DV
Sbjct: 336 DV 337
>MGI|MGI:1289274 [details] [associations]
symbol:Krr1 "KRR1, small subunit (SSU) processome component,
homolog (yeast)" species:10090 "Mus musculus" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 MGI:MGI:1289274 GO:GO:0005730
GO:GO:0003723 GO:GO:0030529 EMBL:CH466539 GO:GO:0006364 CTD:11103
eggNOG:COG1094 GeneTree:ENSGT00390000018775 HOGENOM:HOG000116208
HOVERGEN:HBG051924 KO:K06961 OMA:ALMIKRE OrthoDB:EOG4FR0S6
InterPro:IPR024166 PANTHER:PTHR12581 PIRSF:PIRSF006515
EMBL:AK030560 EMBL:AK032472 EMBL:AK041854 EMBL:AK146926
EMBL:AK168675 EMBL:AC167231 EMBL:BC089510 EMBL:BC094236
IPI:IPI00223570 IPI:IPI00652012 RefSeq:NP_848725.2 UniGene:Mm.34606
ProteinModelPortal:Q8BGA5 SMR:Q8BGA5 STRING:Q8BGA5
PhosphoSite:Q8BGA5 PaxDb:Q8BGA5 PRIDE:Q8BGA5
Ensembl:ENSMUST00000163048 GeneID:52705 KEGG:mmu:52705
InParanoid:Q3UIG9 NextBio:309373 Bgee:Q8BGA5 Genevestigator:Q8BGA5
GermOnline:ENSMUSG00000063334 Uniprot:Q8BGA5
Length = 380
Score = 572 (206.4 bits), Expect = 2.3e-60, Sum P(2) = 2.3e-60
Identities = 107/168 (63%), Positives = 141/168 (83%)
Query: 1 MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
+V+ AL E+ V L+L+EGSMTV TT+KT DPYII++ARDLI+LL+RSV QA++IL
Sbjct: 77 LVQKALNEHHVKATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQ 136
Query: 61 DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
D++ CDIIKIG+LVRNKERFVKRRQ L+GP STLKALE+LT CY++VQGNTV+A+G F
Sbjct: 137 DDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYVMVQGNTVSAIGPFS 196
Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLP 168
GLK+VR++V D M+N +HP+Y+IK LM+K+EL KD L +++W+RFLP
Sbjct: 197 GLKEVRKVVLDTMKN-IHPIYNIKTLMIKRELAKDSELRSQSWERFLP 243
Score = 64 (27.6 bits), Expect = 2.3e-60, Sum P(2) = 2.3e-60
Identities = 19/62 (30%), Positives = 23/62 (37%)
Query: 204 LESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXXRKRDAAFIPPEEPSRQNSCEAEDKTN- 262
L SGEYFL +R+ AFIPP+E EA +T
Sbjct: 281 LASGEYFLKASQKKRQKMEAIKAKQAEALTKRQEERNKAFIPPKEKPAVKPKEASTETKI 340
Query: 263 DV 264
DV
Sbjct: 341 DV 342
>UNIPROTKB|Q13601 [details] [associations]
symbol:KRR1 "KRR1 small subunit processome component
homolog" species:9606 "Homo sapiens" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0005737 GO:GO:0005730 GO:GO:0003723 GO:GO:0030529
GO:GO:0006364 EMBL:AC121761 CTD:11103 eggNOG:COG1094
HOGENOM:HOG000116208 HOVERGEN:HBG051924 KO:K06961 OMA:ALMIKRE
OrthoDB:EOG4FR0S6 InterPro:IPR024166 PANTHER:PTHR12581
PIRSF:PIRSF006515 EMBL:EF010919 EMBL:AK313687 EMBL:AC022507
EMBL:BC005225 EMBL:BC016778 EMBL:BC026107 EMBL:BC033887 EMBL:U55766
IPI:IPI00156032 IPI:IPI00942884 PIR:G02629 RefSeq:NP_008974.5
UniGene:Hs.645517 ProteinModelPortal:Q13601 SMR:Q13601
IntAct:Q13601 MINT:MINT-1464394 STRING:Q13601 PhosphoSite:Q13601
DMDM:50400303 SWISS-2DPAGE:Q13601 PaxDb:Q13601 PRIDE:Q13601
DNASU:11103 Ensembl:ENST00000229214 Ensembl:ENST00000438169
GeneID:11103 KEGG:hsa:11103 UCSC:uc001sxt.3 GeneCards:GC12M075891
H-InvDB:HIX0010835 HGNC:HGNC:5176 HPA:HPA043433 MIM:612817
neXtProt:NX_Q13601 PharmGKB:PA29450 InParanoid:Q13601
PhylomeDB:Q13601 GenomeRNAi:11103 NextBio:42216 PMAP-CutDB:Q13601
ArrayExpress:Q13601 Bgee:Q13601 CleanEx:HS_KRR1
Genevestigator:Q13601 GermOnline:ENSG00000111615 Uniprot:Q13601
Length = 381
Score = 573 (206.8 bits), Expect = 3.8e-60, Sum P(2) = 3.8e-60
Identities = 108/168 (64%), Positives = 142/168 (84%)
Query: 1 MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
+V+ AL E+ V+ L+L+EGSMTV TT+KT DPYII++ARDLI+LL+RSV QA++IL
Sbjct: 78 LVQKALNEHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQ 137
Query: 61 DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
D++ CDIIKIG+LVRNKERFVKRRQ L+GP STLKALE+LT CYI+VQGNTV+A+G F
Sbjct: 138 DDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFS 197
Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLP 168
GLK+VR++V D M+N +HP+Y+IK LM+K+EL KD L +++W+RFLP
Sbjct: 198 GLKEVRKVVLDTMKN-IHPIYNIKSLMIKRELAKDSELRSQSWERFLP 244
Score = 61 (26.5 bits), Expect = 3.8e-60, Sum P(2) = 3.8e-60
Identities = 19/62 (30%), Positives = 23/62 (37%)
Query: 204 LESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXXRKRDAAFIPPEEPSRQNSCEAEDKTN- 262
L SGEYFL +R+ AFIPP+E EA +T
Sbjct: 282 LASGEYFLKANQKKRQKMEAIKAKQAEAISKRQEERNKAFIPPKEKPIVKPKEASTETKI 341
Query: 263 DV 264
DV
Sbjct: 342 DV 343
>UNIPROTKB|Q3B7L9 [details] [associations]
symbol:KRR1 "KRR1 small subunit processome component
homolog" species:9913 "Bos taurus" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005730
GO:GO:0003723 GO:GO:0030529 GO:GO:0006364 EMBL:DAAA02012357
EMBL:BC107550 IPI:IPI00703671 RefSeq:NP_001032908.1
UniGene:Bt.56273 STRING:Q3B7L9 Ensembl:ENSBTAT00000015401
GeneID:513714 KEGG:bta:513714 CTD:11103 eggNOG:COG1094
GeneTree:ENSGT00390000018775 HOGENOM:HOG000116208
HOVERGEN:HBG051924 InParanoid:Q3B7L9 KO:K06961 OMA:ALMIKRE
OrthoDB:EOG4FR0S6 NextBio:20870998 InterPro:IPR024166
PANTHER:PTHR12581 PIRSF:PIRSF006515 Uniprot:Q3B7L9
Length = 382
Score = 574 (207.1 bits), Expect = 6.1e-60, Sum P(2) = 6.1e-60
Identities = 108/168 (64%), Positives = 142/168 (84%)
Query: 1 MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
+V+ AL E+ ++ L+L+EGSMTV TT+KT DPYII++ARDLI+LL+RSV QAI+IL
Sbjct: 78 LVQKALNEHHINATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAIRILQ 137
Query: 61 DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
D++ CDIIKIG+LVRNKERFVKRRQ L+GP STLKALE+LT CYI+VQGNTV+A+G F
Sbjct: 138 DDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFS 197
Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLP 168
GLK+VR++V D M+N +HP+Y+IK LM+K+EL KD L +++W+RFLP
Sbjct: 198 GLKEVRKVVLDTMKN-IHPIYNIKTLMIKRELAKDSELRSQSWERFLP 244
Score = 58 (25.5 bits), Expect = 6.1e-60, Sum P(2) = 6.1e-60
Identities = 14/45 (31%), Positives = 17/45 (37%)
Query: 204 LESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXXRKRDAAFIPPEE 248
L SGEYFL +R+ AFIPP+E
Sbjct: 282 LASGEYFLKASQKKRQKMEAIKAKQAEALSKRQEERNKAFIPPKE 326
>RGD|1306183 [details] [associations]
symbol:Krr1 "KRR1, small subunit (SSU) processome component,
homolog (yeast)" species:10116 "Rattus norvegicus" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
SMART:SM00322 RGD:1306183 GO:GO:0005730 GO:GO:0003723 GO:GO:0030529
GO:GO:0006364 OMA:ALMIKRE InterPro:IPR024166 PANTHER:PTHR12581
PIRSF:PIRSF006515 IPI:IPI00947723 Ensembl:ENSRNOT00000005384
UCSC:RGD:1306183 ArrayExpress:D3ZDQ8 Uniprot:D3ZDQ8
Length = 387
Score = 573 (206.8 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 108/168 (64%), Positives = 141/168 (83%)
Query: 1 MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
+V+ AL E+ V L+L+EGSMTV TT+KT DPYII++ARDLI+LL+RSV QAI+IL
Sbjct: 77 LVQKALNEHHVKATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAIRILQ 136
Query: 61 DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
D++ CDIIKIG+LVRNKERFVKRRQ L+GP STLKALE+LT CY++VQGNTV+A+G F
Sbjct: 137 DDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYVMVQGNTVSAIGPFS 196
Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLP 168
GLK+VR++V D M+N +HP+Y+IK LM+K+EL KD L +++W+RFLP
Sbjct: 197 GLKEVRKVVLDTMKN-IHPIYNIKTLMIKRELAKDSELRSQSWERFLP 243
Score = 58 (25.5 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 16/50 (32%), Positives = 20/50 (40%)
Query: 204 LESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXXRKRDAAFIPPEE-PSRQ 252
L SGEYFL +R+ AFIPP+E P+ Q
Sbjct: 281 LASGEYFLKANQKKRQKMEAIKAKQAEALTKRQEERNKAFIPPKEKPAVQ 330
>UNIPROTKB|F1N9P9 [details] [associations]
symbol:KRR1 "KRR1 small subunit processome component"
species:9031 "Gallus gallus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR004087 SMART:SM00322
GO:GO:0005730 GO:GO:0003723 GO:GO:0030529 GO:GO:0006364
GeneTree:ENSGT00390000018775 OMA:ALMIKRE InterPro:IPR024166
PANTHER:PTHR12581 PIRSF:PIRSF006515 EMBL:AADN02009807
IPI:IPI00598123 Ensembl:ENSGALT00000016625 Uniprot:F1N9P9
Length = 375
Score = 574 (207.1 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 107/168 (63%), Positives = 141/168 (83%)
Query: 1 MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
+V+ AL E+ V+ L+L+EGSMTV+TT+KT DPY I++ARDLI+LL+RSVP QA++IL
Sbjct: 73 LVQKALSEHYVNATLDLIEGSMTVTTTKKTFDPYAIIRARDLIKLLARSVPFEQAVRILQ 132
Query: 61 DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
D++ CDIIKIG+LVRN+E FVKRR L+GP STLKALE+LT CYI+VQGNTV+A+G F
Sbjct: 133 DDVACDIIKIGSLVRNRESFVKRRGRLLGPKGSTLKALELLTNCYIMVQGNTVSALGPFS 192
Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLP 168
GLK+VR++V D M+N +HP+Y+IK LM+K+EL KDP L +NW+RFLP
Sbjct: 193 GLKEVRKVVLDTMKN-IHPIYNIKTLMIKRELSKDPELRTQNWERFLP 239
Score = 55 (24.4 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 14/45 (31%), Positives = 17/45 (37%)
Query: 204 LESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXXRKRDAAFIPPEE 248
L SGEYFL +R+ AFIPP+E
Sbjct: 277 LASGEYFLKESQKKRKRVEEIKAKQADAVKKRQEERNKAFIPPKE 321
>UNIPROTKB|E2R869 [details] [associations]
symbol:KRR1 "KRR1 small subunit processome component"
species:9615 "Canis lupus familiaris" [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 SMART:SM00322 GO:GO:0005730 GO:GO:0003723
GO:GO:0030529 GO:GO:0006364 CTD:11103 GeneTree:ENSGT00390000018775
KO:K06961 OMA:ALMIKRE InterPro:IPR024166 PANTHER:PTHR12581
PIRSF:PIRSF006515 EMBL:AAEX03009859 RefSeq:XP_851876.1
ProteinModelPortal:E2R869 Ensembl:ENSCAFT00000009137 GeneID:475405
KEGG:cfa:475405 Uniprot:E2R869
Length = 380
Score = 570 (205.7 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 107/168 (63%), Positives = 141/168 (83%)
Query: 1 MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
+V+ AL E+ V+ L+L+EGSMTV TT+KT DPYII++ARDLI+LL+RSV QA++IL
Sbjct: 78 LVQKALNEHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQ 137
Query: 61 DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
D++ CDIIKIG+LVRNKERFVKRRQ L+GP STLKALE+LT CYI+VQGNTV+ +G F
Sbjct: 138 DDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSVIGPFS 197
Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLP 168
GLK+VR++V D M+N +HP+Y+IK LM+K+EL KD L +++W+RFLP
Sbjct: 198 GLKEVRKVVLDTMKN-IHPIYNIKTLMIKRELAKDSELRSQSWERFLP 244
Score = 58 (25.5 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 14/45 (31%), Positives = 17/45 (37%)
Query: 204 LESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXXRKRDAAFIPPEE 248
L SGEYFL +R+ AFIPP+E
Sbjct: 282 LASGEYFLKASQKKRQKMEAIKAKQAEALSKRQEERNKAFIPPKE 326
>FB|FBgn0020305 [details] [associations]
symbol:dbe "dribble" species:7227 "Drosophila melanogaster"
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
PROSITE:PS50084 SMART:SM00322 GO:GO:0007275 GO:GO:0005654
GO:GO:0005730 EMBL:AE014134 GO:GO:0003723 GO:GO:0030529
GO:GO:0006364 eggNOG:COG1094 GeneTree:ENSGT00390000018775 KO:K06961
OMA:ALMIKRE InterPro:IPR024166 PANTHER:PTHR12581 PIRSF:PIRSF006515
EMBL:Z96931 EMBL:AY069529 RefSeq:NP_477240.1 UniGene:Dm.2087
ProteinModelPortal:Q9VPU8 SMR:Q9VPU8 IntAct:Q9VPU8
MINT:MINT-1588813 STRING:Q9VPU8 PRIDE:Q9VPU8
EnsemblMetazoa:FBtr0078030 GeneID:33269 KEGG:dme:Dmel_CG4258
UCSC:CG4258-RA CTD:33269 FlyBase:FBgn0020305 InParanoid:Q9VPU8
PhylomeDB:Q9VPU8 GenomeRNAi:33269 NextBio:782766 Bgee:Q9VPU8
Uniprot:Q9VPU8
Length = 345
Score = 564 (203.6 bits), Expect = 2.6e-59, Sum P(2) = 2.6e-59
Identities = 105/168 (62%), Positives = 139/168 (82%)
Query: 1 MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
+V+ L E+ + EL+L+EGSM V T+RKT DPYII+KARD+I+L++RSVP QA ++L
Sbjct: 60 LVEQCLAEHHLKAELDLMEGSMVVKTSRKTWDPYIIIKARDMIKLMARSVPFEQAKRVLQ 119
Query: 61 DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
D++ CDIIKIGNLV KE+FVKRRQ L+GPN +TLK++E+LT CY+LVQGNTV+A+G +K
Sbjct: 120 DDIGCDIIKIGNLVHKKEKFVKRRQRLIGPNGATLKSIELLTDCYVLVQGNTVSALGPYK 179
Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLP 168
GL+QVR IV + M N +HP+Y+IK LM+K+EL KDP LANE+W RFLP
Sbjct: 180 GLQQVRDIVLETMNN-VHPIYNIKALMIKRELMKDPRLANEDWSRFLP 226
Score = 62 (26.9 bits), Expect = 2.6e-59, Sum P(2) = 2.6e-59
Identities = 16/56 (28%), Positives = 22/56 (39%)
Query: 204 LESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXXRKRDAAFIPPEEPSRQNSCEAED 259
L SGEYFL+ +R+ F+PP E S +S + ED
Sbjct: 264 LASGEYFLNQEQKQAKRNQERTEKQKEAAKRQDERRNKDFVPPTEESAASSRKKED 319
>DICTYBASE|DDB_G0280805 [details] [associations]
symbol:DDB_G0280805 "ribosomal RNA assembly protein"
species:44689 "Dictyostelium discoideum" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR004087
PROSITE:PS50084 SMART:SM00322 dictyBase:DDB_G0280805 GO:GO:0005730
GenomeReviews:CM000152_GR GO:GO:0003723 GO:GO:0030529 GO:GO:0006364
eggNOG:COG1094 KO:K06961 InterPro:IPR024166 PANTHER:PTHR12581
PIRSF:PIRSF006515 EMBL:AAFI02000038 RefSeq:XP_641041.1
ProteinModelPortal:Q54UU6 STRING:Q54UU6 EnsemblProtists:DDB0204743
GeneID:8622743 KEGG:ddi:DDB_G0280805 OMA:PSYLESY
ProtClustDB:CLSZ2428997 Uniprot:Q54UU6
Length = 374
Score = 587 (211.7 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 109/168 (64%), Positives = 141/168 (83%)
Query: 1 MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
+V+ L E+G+ C+L+L+EGSMTV+TT+K DP I+KARDLI+LLSRSVP A K+L+
Sbjct: 78 LVENVLHEHGIECKLDLIEGSMTVTTTKKCWDPVAILKARDLIKLLSRSVPFEHAQKVLN 137
Query: 61 DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
D+ CDIIKIG VRNKERFVKRRQ LVGP+ STLKA+E+LT CY+LVQGNTV+++G +
Sbjct: 138 DDYNCDIIKIGGFVRNKERFVKRRQRLVGPDGSTLKAIELLTKCYVLVQGNTVSSIGPWN 197
Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLP 168
GL QVR+IVEDC++N +HP+Y+IK LM+K+ELEKD L NENW+R+LP
Sbjct: 198 GLVQVRKIVEDCLKN-IHPIYNIKELMIKRELEKDETLKNENWERYLP 244
Score = 38 (18.4 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 204 LESGEYFLS 212
+ESGEYF S
Sbjct: 282 MESGEYFAS 290
>ZFIN|ZDB-GENE-060623-10 [details] [associations]
symbol:krr1 "KRR1, small subunit (SSU) processome
component, homolog (yeast)" species:7955 "Danio rerio" [GO:0003723
"RNA binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR004087 SMART:SM00322 ZFIN:ZDB-GENE-060623-10
GO:GO:0005730 GO:GO:0003723 GO:GO:0030529 GO:GO:0006364
GeneTree:ENSGT00390000018775 InterPro:IPR024166 PANTHER:PTHR12581
PIRSF:PIRSF006515 EMBL:CU694453 IPI:IPI00772719
Ensembl:ENSDART00000125815 Bgee:F1R1V6 Uniprot:F1R1V6
Length = 398
Score = 577 (208.2 bits), Expect = 5.4e-59, Sum P(2) = 5.4e-59
Identities = 107/168 (63%), Positives = 140/168 (83%)
Query: 1 MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
+V+ AL E ++ L+L+EGSMTV+TT+KT DPY I++ARDLI+LL+RSVP QA++ILD
Sbjct: 95 LVQKALAELFINATLDLIEGSMTVNTTKKTFDPYSIIRARDLIKLLARSVPFEQAVRILD 154
Query: 61 DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
D+M CDIIKIG LVRN+ERFVKRRQ L+GP STLKALE+LT CY++VQGNTV+A+G F
Sbjct: 155 DDMACDIIKIGTLVRNRERFVKRRQRLIGPKGSTLKALELLTNCYVMVQGNTVSALGPFN 214
Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLP 168
GLK+VR++V D M+N +HP+Y+IK LM+K+EL DP L ++W RFLP
Sbjct: 215 GLKEVRKVVLDTMKN-IHPIYNIKTLMIKRELANDPELRTQSWGRFLP 261
Score = 46 (21.3 bits), Expect = 5.4e-59, Sum P(2) = 5.4e-59
Identities = 12/61 (19%), Positives = 20/61 (32%)
Query: 204 LESGEYFLSXXXXXXXXXXXXXXXXXXXXXXXXRKRDAAFIPPEEPSRQNSCEAEDKTND 263
L +GE+FL +R AF+PP+E + + N
Sbjct: 299 LATGEFFLRESEKRRKKMSEIKVKQAEALSKRQEERKKAFVPPKEKTAVKKSKPATSENK 358
Query: 264 V 264
+
Sbjct: 359 I 359
>WB|WBGene00015461 [details] [associations]
symbol:C05C8.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR004087 SMART:SM00322 GO:GO:0040007 GO:GO:0018991
GO:GO:0040010 GO:GO:0005730 GO:GO:0002119 GO:GO:0010171
GO:GO:0003723 GO:GO:0030529 GO:GO:0006364 eggNOG:COG1094
GeneTree:ENSGT00390000018775 HOGENOM:HOG000116208 KO:K06961
OMA:ALMIKRE InterPro:IPR024166 PANTHER:PTHR12581 PIRSF:PIRSF006515
EMBL:FO080353 PIR:T31743 RefSeq:NP_504837.1
ProteinModelPortal:O16311 SMR:O16311 IntAct:O16311 STRING:O16311
PaxDb:O16311 EnsemblMetazoa:C05C8.2.1 EnsemblMetazoa:C05C8.2.2
GeneID:179115 KEGG:cel:CELE_C05C8.2 UCSC:C05C8.2 CTD:179115
WormBase:C05C8.2 InParanoid:O16311 NextBio:903988 Uniprot:O16311
Length = 370
Score = 522 (188.8 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
Identities = 97/168 (57%), Positives = 135/168 (80%)
Query: 1 MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
+++ AL E+ + +L+L+EG+M V TTRKT DPYII+KAR++I+LLSRSVP QAI++L+
Sbjct: 83 LIEKALGEHFLKADLDLLEGTMCVRTTRKTWDPYIIMKAREVIKLLSRSVPYEQAIRVLE 142
Query: 61 DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
DE+ C+IIKI ++VRNKERFVKRR L+G + +TLKALE+LT CY+ VQG TV A+G
Sbjct: 143 DEIYCEIIKISSMVRNKERFVKRRARLIGNDGATLKALELLTQCYVCVQGGTVCAVGPLA 202
Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLP 168
GLKQ+ +IV DCM+N +HP+Y+IK +M+K+EL K+ L + NWD +LP
Sbjct: 203 GLKQINQIVTDCMKN-IHPIYNIKTMMIKRELSKNDELKDANWDAYLP 249
Score = 37 (18.1 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
Identities = 6/8 (75%), Positives = 8/8 (100%)
Query: 204 LESGEYFL 211
+ESGEYF+
Sbjct: 294 IESGEYFI 301
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 307 220 0.00094 112 3 11 22 0.40 33
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 593 (63 KB)
Total size of DFA: 169 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.09u 0.08s 17.17t Elapsed: 00:00:02
Total cpu time: 17.09u 0.08s 17.17t Elapsed: 00:00:02
Start: Fri May 10 13:31:45 2013 End: Fri May 10 13:31:47 2013