BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 021811
         (307 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|E7QBZ1|KRR1_YEASZ KRR1 small subunit processome component OS=Saccharomyces cerevisiae
           (strain Zymaflore VL3) GN=KRR1 PE=3 SV=1
          Length = 316

 Score =  329 bits (843), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 166/250 (66%), Positives = 202/250 (80%), Gaps = 4/250 (1%)

Query: 2   VKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILDD 61
           V  AL ++ ++C L+LVEGSMTV TTRKT DP II+KARDLI+LL+RSVP PQA+KIL D
Sbjct: 60  VTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQD 119

Query: 62  EMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKG 121
           +M CD+IKIGN V NKERFVKRRQ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKG
Sbjct: 120 DMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKG 179

Query: 122 LKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNV---KQK 178
           LK+VRR+VEDCM+N +HP+YHIK LM+K+EL K P LANE+W RFLP FKK+NV   K K
Sbjct: 180 LKEVRRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPK 238

Query: 179 KVKSKEKKPYTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKRK 238
           K+++ EKK YTPFPP   P K+D  +ESGEYFLS+R+K+ KK  E++EKQ E+  E + +
Sbjct: 239 KIRNVEKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEE 298

Query: 239 RDAAFIPPEE 248
           R   FI PEE
Sbjct: 299 RAKDFIAPEE 308


>sp|E7LRT8|KRR1_YEASV KRR1 small subunit processome component OS=Saccharomyces cerevisiae
           (strain VIN 13) GN=KRR1 PE=3 SV=1
          Length = 316

 Score =  329 bits (843), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 166/250 (66%), Positives = 202/250 (80%), Gaps = 4/250 (1%)

Query: 2   VKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILDD 61
           V  AL ++ ++C L+LVEGSMTV TTRKT DP II+KARDLI+LL+RSVP PQA+KIL D
Sbjct: 60  VTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQD 119

Query: 62  EMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKG 121
           +M CD+IKIGN V NKERFVKRRQ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKG
Sbjct: 120 DMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKG 179

Query: 122 LKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNV---KQK 178
           LK+VRR+VEDCM+N +HP+YHIK LM+K+EL K P LANE+W RFLP FKK+NV   K K
Sbjct: 180 LKEVRRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPK 238

Query: 179 KVKSKEKKPYTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKRK 238
           K+++ EKK YTPFPP   P K+D  +ESGEYFLS+R+K+ KK  E++EKQ E+  E + +
Sbjct: 239 KIRNVEKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEE 298

Query: 239 RDAAFIPPEE 248
           R   FI PEE
Sbjct: 299 RAKDFIAPEE 308


>sp|P25586|KRR1_YEAST KRR1 small subunit processome component OS=Saccharomyces cerevisiae
           (strain ATCC 204508 / S288c) GN=KRR1 PE=1 SV=1
          Length = 316

 Score =  329 bits (843), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 166/250 (66%), Positives = 202/250 (80%), Gaps = 4/250 (1%)

Query: 2   VKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILDD 61
           V  AL ++ ++C L+LVEGSMTV TTRKT DP II+KARDLI+LL+RSVP PQA+KIL D
Sbjct: 60  VTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQD 119

Query: 62  EMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKG 121
           +M CD+IKIGN V NKERFVKRRQ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKG
Sbjct: 120 DMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKG 179

Query: 122 LKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNV---KQK 178
           LK+VRR+VEDCM+N +HP+YHIK LM+K+EL K P LANE+W RFLP FKK+NV   K K
Sbjct: 180 LKEVRRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPK 238

Query: 179 KVKSKEKKPYTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKRK 238
           K+++ EKK YTPFPP   P K+D  +ESGEYFLS+R+K+ KK  E++EKQ E+  E + +
Sbjct: 239 KIRNVEKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEE 298

Query: 239 RDAAFIPPEE 248
           R   FI PEE
Sbjct: 299 RAKDFIAPEE 308


>sp|C8Z430|KRR1_YEAS8 KRR1 small subunit processome component OS=Saccharomyces cerevisiae
           (strain Lalvin EC1118 / Prise de mousse) GN=KRR1 PE=3
           SV=1
          Length = 316

 Score =  329 bits (843), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 166/250 (66%), Positives = 202/250 (80%), Gaps = 4/250 (1%)

Query: 2   VKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILDD 61
           V  AL ++ ++C L+LVEGSMTV TTRKT DP II+KARDLI+LL+RSVP PQA+KIL D
Sbjct: 60  VTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQD 119

Query: 62  EMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKG 121
           +M CD+IKIGN V NKERFVKRRQ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKG
Sbjct: 120 DMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKG 179

Query: 122 LKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNV---KQK 178
           LK+VRR+VEDCM+N +HP+YHIK LM+K+EL K P LANE+W RFLP FKK+NV   K K
Sbjct: 180 LKEVRRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPK 238

Query: 179 KVKSKEKKPYTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKRK 238
           K+++ EKK YTPFPP   P K+D  +ESGEYFLS+R+K+ KK  E++EKQ E+  E + +
Sbjct: 239 KIRNVEKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEE 298

Query: 239 RDAAFIPPEE 248
           R   FI PEE
Sbjct: 299 RAKDFIAPEE 308


>sp|B5VEQ2|KRR1_YEAS6 KRR1 small subunit processome component OS=Saccharomyces cerevisiae
           (strain AWRI1631) GN=KRR1 PE=3 SV=1
          Length = 316

 Score =  329 bits (843), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 166/250 (66%), Positives = 202/250 (80%), Gaps = 4/250 (1%)

Query: 2   VKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILDD 61
           V  AL ++ ++C L+LVEGSMTV TTRKT DP II+KARDLI+LL+RSVP PQA+KIL D
Sbjct: 60  VTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQD 119

Query: 62  EMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKG 121
           +M CD+IKIGN V NKERFVKRRQ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKG
Sbjct: 120 DMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKG 179

Query: 122 LKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNV---KQK 178
           LK+VRR+VEDCM+N +HP+YHIK LM+K+EL K P LANE+W RFLP FKK+NV   K K
Sbjct: 180 LKEVRRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPK 238

Query: 179 KVKSKEKKPYTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKRK 238
           K+++ EKK YTPFPP   P K+D  +ESGEYFLS+R+K+ KK  E++EKQ E+  E + +
Sbjct: 239 KIRNVEKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEE 298

Query: 239 RDAAFIPPEE 248
           R   FI PEE
Sbjct: 299 RAKDFIAPEE 308


>sp|B3LU25|KRR1_YEAS1 KRR1 small subunit processome component OS=Saccharomyces cerevisiae
           (strain RM11-1a) GN=KRR1 PE=3 SV=1
          Length = 316

 Score =  329 bits (843), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 166/250 (66%), Positives = 202/250 (80%), Gaps = 4/250 (1%)

Query: 2   VKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILDD 61
           V  AL ++ ++C L+LVEGSMTV TTRKT DP II+KARDLI+LL+RSVP PQA+KIL D
Sbjct: 60  VTRALDKHNIACVLDLVEGSMTVKTTRKTYDPAIILKARDLIKLLARSVPFPQAVKILQD 119

Query: 62  EMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKG 121
           +M CD+IKIGN V NKERFVKRRQ LVGPN +TLKALE+LT CYILVQGNTV+AMG FKG
Sbjct: 120 DMACDVIKIGNFVTNKERFVKRRQRLVGPNGNTLKALELLTKCYILVQGNTVSAMGPFKG 179

Query: 122 LKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNV---KQK 178
           LK+VRR+VEDCM+N +HP+YHIK LM+K+EL K P LANE+W RFLP FKK+NV   K K
Sbjct: 180 LKEVRRVVEDCMKN-IHPIYHIKELMIKRELAKRPELANEDWSRFLPMFKKRNVARKKPK 238

Query: 179 KVKSKEKKPYTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKRK 238
           K+++ EKK YTPFPP   P K+D  +ESGEYFLS+R+K+ KK  E++EKQ E+  E + +
Sbjct: 239 KIRNVEKKVYTPFPPAQLPRKVDLEIESGEYFLSKREKQMKKLNEQKEKQMEREIERQEE 298

Query: 239 RDAAFIPPEE 248
           R   FI PEE
Sbjct: 299 RAKDFIAPEE 308


>sp|O74777|KRR1_SCHPO KRR1 small subunit processome component homolog
           OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
           GN=mis3 PE=3 SV=1
          Length = 327

 Score =  317 bits (813), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 166/252 (65%), Positives = 204/252 (80%), Gaps = 2/252 (0%)

Query: 2   VKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILDD 61
           V  AL ++G++C L+LVEGSMTV TTRKT DPY I+ ARDLI+LL+RSVP PQA+KI+ D
Sbjct: 73  VTRALDKFGITCVLDLVEGSMTVKTTRKTFDPYSILDARDLIKLLARSVPFPQAVKIMQD 132

Query: 62  EMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKG 121
            + CDIIKIGN++RNKERFVKRRQ L+G N  TLKALE+LT CYILVQG TVA MG +KG
Sbjct: 133 GVACDIIKIGNILRNKERFVKRRQRLIGTNGQTLKALELLTQCYILVQGTTVAVMGGYKG 192

Query: 122 LKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNVKQKK-V 180
           LK+VRRIVEDCM N +HP+YHIK LM+K+EL KDP LANE+WDRFLP+FKK+NV ++K  
Sbjct: 193 LKEVRRIVEDCMHN-IHPIYHIKELMIKRELAKDPTLANESWDRFLPQFKKRNVARRKPA 251

Query: 181 KSKEKKPYTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKRKRD 240
           K +E K YTPFPP   PSK+D  +ESGEYFL + +KE KK  EK+E+Q EK  E +++R 
Sbjct: 252 KIRETKEYTPFPPAQPPSKLDLEIESGEYFLKKEEKERKKRAEKKEQQKEKKKEKEKERM 311

Query: 241 AAFIPPEEPSRQ 252
            AFIPPEE S++
Sbjct: 312 KAFIPPEESSKK 323


>sp|B4JDU5|KRR1_DROGR KRR1 small subunit processome component homolog OS=Drosophila
           grimshawi GN=dbe PE=3 SV=1
          Length = 341

 Score =  303 bits (775), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 147/253 (58%), Positives = 195/253 (77%), Gaps = 5/253 (1%)

Query: 1   MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
           +V+  + E+ +  EL+L+EGSM V TTRKT DPYII+K+RD+I+L++RSVP  QA ++L 
Sbjct: 61  LVQQTVAEHHLRAELDLIEGSMVVKTTRKTWDPYIIIKSRDMIKLMARSVPFEQAKRVLQ 120

Query: 61  DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
           DE  CDIIKIGNLV  KE+FVKRRQ L+GPN +TLK++E+LT CY+LVQGNTVAA+G +K
Sbjct: 121 DETGCDIIKIGNLVHKKEKFVKRRQRLIGPNGATLKSIELLTDCYVLVQGNTVAALGPYK 180

Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNVKQKKV 180
           GL+QVR IV + M N +HP+Y+IK LM+K+EL KDP LANE+W RFLPKFK KN+ ++K 
Sbjct: 181 GLQQVRDIVLETMNN-VHPIYNIKALMIKRELMKDPQLANEDWSRFLPKFKNKNISKRK- 238

Query: 181 KSKEKKP---YTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKR 237
           + K +KP   YTPFPP    SKIDK L SGEYFL++ +K++K+ QE+  KQAE   +   
Sbjct: 239 QPKSRKPKGEYTPFPPAQPESKIDKQLASGEYFLNKEQKQAKRQQERVAKQAEAAKKQDE 298

Query: 238 KRDAAFIPPEEPS 250
           +R+  F+PP E S
Sbjct: 299 RRNKDFMPPTEDS 311


>sp|B4N0P7|KRR1_DROWI KRR1 small subunit processome component homolog OS=Drosophila
           willistoni GN=dbe PE=3 SV=1
          Length = 347

 Score =  303 bits (775), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 152/262 (58%), Positives = 201/262 (76%), Gaps = 4/262 (1%)

Query: 1   MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
           +V+ A+ E+ +  EL+LVEGSM V TTRKT DPYII+KARD+I+L++RSVP  QA ++L 
Sbjct: 61  LVEQAVGEHHLKAELDLVEGSMVVKTTRKTWDPYIIIKARDMIKLMARSVPFEQAKRVLQ 120

Query: 61  DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
           DE+ CDIIKIGNLV+ KE+FVKRRQ L+GPN +TLK++E+LT CY+LVQGNTV+A+G +K
Sbjct: 121 DEIGCDIIKIGNLVQKKEKFVKRRQRLIGPNGATLKSIELLTDCYVLVQGNTVSALGPYK 180

Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNVKQKKV 180
           GL+QVR IV + M N +HP+Y+IK LM+K+EL KDP LANE+W RFLPKFK KN+ ++K 
Sbjct: 181 GLQQVRDIVLETMNN-VHPIYNIKALMIKRELMKDPKLANEDWSRFLPKFKNKNLSKRKQ 239

Query: 181 KSKEKKP--YTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKRK 238
              +K    YTPFPP    SKIDK L SGEYFL++ +K++K+ QE+Q KQAE   +   +
Sbjct: 240 PKVKKPKKEYTPFPPAQPESKIDKQLASGEYFLNKEQKQAKRQQERQTKQAEAAKKQDER 299

Query: 239 RDAAFIPP-EEPSRQNSCEAED 259
           R+  FIPP EEP   +  +A D
Sbjct: 300 RNKDFIPPTEEPPTGSKRKAND 321


>sp|Q9VPU8|KRR1_DROME KRR1 small subunit processome component homolog OS=Drosophila
           melanogaster GN=dbe PE=1 SV=1
          Length = 345

 Score =  302 bits (774), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 152/283 (53%), Positives = 208/283 (73%), Gaps = 3/283 (1%)

Query: 1   MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
           +V+  L E+ +  EL+L+EGSM V T+RKT DPYII+KARD+I+L++RSVP  QA ++L 
Sbjct: 60  LVEQCLAEHHLKAELDLMEGSMVVKTSRKTWDPYIIIKARDMIKLMARSVPFEQAKRVLQ 119

Query: 61  DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
           D++ CDIIKIGNLV  KE+FVKRRQ L+GPN +TLK++E+LT CY+LVQGNTV+A+G +K
Sbjct: 120 DDIGCDIIKIGNLVHKKEKFVKRRQRLIGPNGATLKSIELLTDCYVLVQGNTVSALGPYK 179

Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNVKQKKV 180
           GL+QVR IV + M N +HP+Y+IK LM+K+EL KDP LANE+W RFLPKFK KN+ ++K 
Sbjct: 180 GLQQVRDIVLETMNN-VHPIYNIKALMIKRELMKDPRLANEDWSRFLPKFKNKNISKRKQ 238

Query: 181 KSKEKKP--YTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKRK 238
              +K+   YTPFPP    SK+DK L SGEYFL++ +K++K+ QE+ EKQ E       +
Sbjct: 239 PKVKKQKKEYTPFPPSQPESKVDKQLASGEYFLNQEQKQAKRNQERTEKQKEAAKRQDER 298

Query: 239 RDAAFIPPEEPSRQNSCEAEDKTNDVAAMAKSLKEKAKKLRKQ 281
           R+  F+PP E S  +S + ED ++      K+LK K  K  K+
Sbjct: 299 RNKDFVPPTEESAASSRKKEDGSSSSKVDVKALKAKLIKANKK 341


>sp|B3N899|KRR1_DROER KRR1 small subunit processome component homolog OS=Drosophila
           erecta GN=dbe PE=3 SV=1
          Length = 345

 Score =  302 bits (774), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 152/283 (53%), Positives = 207/283 (73%), Gaps = 3/283 (1%)

Query: 1   MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
           +V+  L E+ +  EL+L+EGSM V T+RKT DPYII+KARD+I+L++RSVP  QA ++L 
Sbjct: 60  LVEQCLAEHHLKAELDLMEGSMVVRTSRKTWDPYIIIKARDMIKLMARSVPFEQAKRVLQ 119

Query: 61  DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
           D++ CDIIKIGNLV  KE+FVKRRQ L+GPN +TLK++E+LT CY+LVQGNTV+A+G +K
Sbjct: 120 DDIGCDIIKIGNLVHKKEKFVKRRQRLIGPNGATLKSIELLTDCYVLVQGNTVSALGPYK 179

Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNVKQKKV 180
           GL+QVR IV + M N +HP+Y+IK LM+K+EL KDP LANE+W RFLPKFK KN+ ++K 
Sbjct: 180 GLQQVRDIVLETMNN-VHPIYNIKALMIKRELMKDPRLANEDWSRFLPKFKNKNISKRKQ 238

Query: 181 KSKEKKP--YTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKRK 238
              +K+   YTPFPP    SK+DK L SGEYFL++ +K++K+ QE+ EKQ E       +
Sbjct: 239 PKVKKQKKEYTPFPPSQPESKVDKQLASGEYFLNQEQKQAKRNQERTEKQKEAAKRQDER 298

Query: 239 RDAAFIPPEEPSRQNSCEAEDKTNDVAAMAKSLKEKAKKLRKQ 281
           R+  F+PP E S  +S + ED  +      K+LK K  K  K+
Sbjct: 299 RNKDFVPPTEESASSSLKKEDGFSSSKVDVKALKAKLIKANKK 341


>sp|B4KF66|KRR1_DROMO KRR1 small subunit processome component homolog OS=Drosophila
           mojavensis GN=dbe PE=3 SV=1
          Length = 344

 Score =  301 bits (770), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 157/286 (54%), Positives = 209/286 (73%), Gaps = 10/286 (3%)

Query: 1   MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
           +V+  L E+ +  EL+L+EGSM V TTRKT DPYII+K+RD+I+L++RSVP  QA ++L 
Sbjct: 61  LVEQCLAEHHLKAELDLIEGSMVVKTTRKTWDPYIIIKSRDMIKLMARSVPFEQAKRVLQ 120

Query: 61  DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
           D+  CDIIKIGNLV  KE+FVKRRQ L+GPN +TLK++E+LT CY+LVQGNTV+A+G +K
Sbjct: 121 DDTGCDIIKIGNLVHKKEKFVKRRQRLIGPNGATLKSIELLTDCYVLVQGNTVSALGPYK 180

Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNVKQKKV 180
           GL+QVR IV D M N +HP+Y+IK LM+K+EL KDP LA E+W RFLPKFK KN+ ++K 
Sbjct: 181 GLQQVRDIVLDTMNN-VHPIYNIKALMIKRELMKDPKLAGEDWSRFLPKFKNKNISKRKQ 239

Query: 181 KSKEKKP--YTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKRK 238
              +K    YTPFPP    SKIDK L +GEYFL++ +K++K+ QE+  KQAE   +   +
Sbjct: 240 PKNKKPKKEYTPFPPQQPESKIDKQLATGEYFLNKEQKQAKRQQERTAKQAEAAKKQDER 299

Query: 239 RDAAFIPPEE----PSRQNSCEAEDKTNDVAAM-AKSLKEKAKKLR 279
           R+  F+PP E    PSR+ +  AED   DV A+ AK +K   KK R
Sbjct: 300 RNKDFVPPTEDTPGPSRKRA--AEDNKVDVQALKAKLMKANKKKER 343


>sp|Q8BGA5|KRR1_MOUSE KRR1 small subunit processome component homolog OS=Mus musculus
           GN=Krr1 PE=2 SV=1
          Length = 380

 Score =  300 bits (769), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 152/270 (56%), Positives = 203/270 (75%), Gaps = 4/270 (1%)

Query: 1   MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
           +V+ AL E+ V   L+L+EGSMTV TT+KT DPYII++ARDLI+LL+RSV   QA++IL 
Sbjct: 77  LVQKALNEHHVKATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQ 136

Query: 61  DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
           D++ CDIIKIG+LVRNKERFVKRRQ L+GP  STLKALE+LT CY++VQGNTV+A+G F 
Sbjct: 137 DDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYVMVQGNTVSAIGPFS 196

Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNVKQKKV 180
           GLK+VR++V D M+N +HP+Y+IK LM+K+EL KD  L +++W+RFLP+FK KNV ++K 
Sbjct: 197 GLKEVRKVVLDTMKN-IHPIYNIKTLMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKE 255

Query: 181 KSKEKKP--YTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKRK 238
             K+     YTPFPPP   S+IDK L SGEYFL   +K+ +K +  + KQAE   + + +
Sbjct: 256 PKKKSVKKEYTPFPPPQPESQIDKELASGEYFLKASQKKRQKMEAIKAKQAEALTKRQEE 315

Query: 239 RDAAFIPPEEPSRQNSCEAEDKTN-DVAAM 267
           R+ AFIPP+E       EA  +T  DVAA+
Sbjct: 316 RNKAFIPPKEKPAVKPKEASTETKIDVAAI 345


>sp|B4G9L6|KRR1_DROPE KRR1 small subunit processome component homolog OS=Drosophila
           persimilis GN=dbe PE=3 SV=1
          Length = 340

 Score =  300 bits (767), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 151/276 (54%), Positives = 204/276 (73%), Gaps = 5/276 (1%)

Query: 1   MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
           +V+  + E+ +  EL+LVEGSM V TTRKT DPYII+K+RD+I+L++RSVP  QA ++L 
Sbjct: 59  LVEQCVAEHQLKAELDLVEGSMVVKTTRKTWDPYIIIKSRDMIKLMARSVPFEQAKRVLQ 118

Query: 61  DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
           D++ CDIIKIGNLV  KE+FVKRRQ L+GPN +TLK++E+LT CY+LVQGNTV+A+G +K
Sbjct: 119 DDIGCDIIKIGNLVHKKEKFVKRRQRLIGPNGATLKSIELLTDCYVLVQGNTVSALGPYK 178

Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNVKQKKV 180
           GL+QVR IV + M N +HP+Y+IK LM+K+EL KDP LANE+W RFLPKFK KN+ ++K 
Sbjct: 179 GLQQVRDIVLETMNN-VHPIYNIKALMIKRELMKDPKLANEDWSRFLPKFKNKNISKRKQ 237

Query: 181 KSKEKKP--YTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKRK 238
              +K    YTPFPP    SKIDK L SGEYFL++ +K++K+ QE+  KQA+   +   +
Sbjct: 238 PKSKKPKKEYTPFPPAQPESKIDKQLASGEYFLNQEQKQAKRNQERSAKQADAAKKQDER 297

Query: 239 RDAAFIPPEE--PSRQNSCEAEDKTNDVAAMAKSLK 272
           R+  F+PP E  PSR+   E   K +  A  AK +K
Sbjct: 298 RNKDFVPPTEEAPSRKRQAEDSSKVDVKALKAKLVK 333


>sp|Q3B7L9|KRR1_BOVIN KRR1 small subunit processome component homolog OS=Bos taurus
           GN=KRR1 PE=2 SV=2
          Length = 382

 Score =  298 bits (764), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 146/250 (58%), Positives = 196/250 (78%), Gaps = 3/250 (1%)

Query: 1   MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
           +V+ AL E+ ++  L+L+EGSMTV TT+KT DPYII++ARDLI+LL+RSV   QAI+IL 
Sbjct: 78  LVQKALNEHHINATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAIRILQ 137

Query: 61  DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
           D++ CDIIKIG+LVRNKERFVKRRQ L+GP  STLKALE+LT CYI+VQGNTV+A+G F 
Sbjct: 138 DDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFS 197

Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNVKQKKV 180
           GLK+VR++V D M+N +HP+Y+IK LM+K+EL KD  L +++W+RFLP+FK KNV ++K 
Sbjct: 198 GLKEVRKVVLDTMKN-IHPIYNIKTLMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKE 256

Query: 181 KSKEKKP--YTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKRK 238
             K+     YTPFPPP   S+IDK L SGEYFL   +K+ +K +  + KQAE  ++ + +
Sbjct: 257 PKKKTVKKEYTPFPPPQPESQIDKELASGEYFLKASQKKRQKMEAIKAKQAEALSKRQEE 316

Query: 239 RDAAFIPPEE 248
           R+ AFIPP+E
Sbjct: 317 RNKAFIPPKE 326


>sp|Q13601|KRR1_HUMAN KRR1 small subunit processome component homolog OS=Homo sapiens
           GN=KRR1 PE=1 SV=4
          Length = 381

 Score =  298 bits (763), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 152/270 (56%), Positives = 205/270 (75%), Gaps = 4/270 (1%)

Query: 1   MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
           +V+ AL E+ V+  L+L+EGSMTV TT+KT DPYII++ARDLI+LL+RSV   QA++IL 
Sbjct: 78  LVQKALNEHHVNATLDLIEGSMTVCTTKKTFDPYIIIRARDLIKLLARSVSFEQAVRILQ 137

Query: 61  DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
           D++ CDIIKIG+LVRNKERFVKRRQ L+GP  STLKALE+LT CYI+VQGNTV+A+G F 
Sbjct: 138 DDVACDIIKIGSLVRNKERFVKRRQRLIGPKGSTLKALELLTNCYIMVQGNTVSAIGPFS 197

Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNVKQKKV 180
           GLK+VR++V D M+N +HP+Y+IK LM+K+EL KD  L +++W+RFLP+FK KNV ++K 
Sbjct: 198 GLKEVRKVVLDTMKN-IHPIYNIKSLMIKRELAKDSELRSQSWERFLPQFKHKNVNKRKE 256

Query: 181 KSKEKKP--YTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKRK 238
             K+     YTPFPPP   S+IDK L SGEYFL   +K+ +K +  + KQAE  ++ + +
Sbjct: 257 PKKKTVKKEYTPFPPPQPESQIDKELASGEYFLKANQKKRQKMEAIKAKQAEAISKRQEE 316

Query: 239 RDAAFIPPEEPSRQNSCEAEDKTN-DVAAM 267
           R+ AFIPP+E       EA  +T  DVA++
Sbjct: 317 RNKAFIPPKEKPIVKPKEASTETKIDVASI 346


>sp|B4P2Y8|KRR1_DROYA KRR1 small subunit processome component homolog OS=Drosophila
           yakuba GN=dbe PE=3 SV=1
          Length = 344

 Score =  297 bits (761), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 151/282 (53%), Positives = 207/282 (73%), Gaps = 6/282 (2%)

Query: 1   MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
           +V+  L E+ +  EL+L+EGSM V T+RKT DPYII+KARD+I+L++RSVP  QA ++L 
Sbjct: 60  LVEQCLSEHHLKAELDLMEGSMVVKTSRKTWDPYIIIKARDMIKLMARSVPFEQAKRVLQ 119

Query: 61  DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
           D++ CDIIKIGNLV  KE+FVKRRQ L+GPN +TLK++E+LT CY+LVQGNTV+A+G +K
Sbjct: 120 DDIGCDIIKIGNLVHKKEKFVKRRQRLIGPNGATLKSIELLTDCYVLVQGNTVSALGPYK 179

Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNVKQKKV 180
           GL+QVR IV + M N +HP+Y+IK LM+K+EL KDP LANE+W RFLPKFK KN+ ++K 
Sbjct: 180 GLQQVRDIVLETMNN-VHPIYNIKALMIKRELMKDPRLANEDWSRFLPKFKNKNISKRKQ 238

Query: 181 KSKEKKP--YTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKRK 238
              +K+   YTPFPP    SK+DK L SGEYFL++ +K++K+ Q + EKQ E       +
Sbjct: 239 PKVKKQKKEYTPFPPSQPESKVDKQLASGEYFLNQEQKQAKRNQGRTEKQKEAAKRQDER 298

Query: 239 RDAAFIPPEEPSRQNSCEAEDKTN---DVAAMAKSLKEKAKK 277
           R+  F+PP E S  +S + ED ++   DV A+   L +  KK
Sbjct: 299 RNKDFVPPTEESAASSRKKEDGSSTKVDVKALKAKLIKANKK 340


>sp|B3MM49|KRR1_DROAN KRR1 small subunit processome component homolog OS=Drosophila
           ananassae GN=dbe PE=3 SV=1
          Length = 343

 Score =  292 bits (747), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 141/250 (56%), Positives = 190/250 (76%), Gaps = 3/250 (1%)

Query: 1   MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
           +V+  + E+ +  EL+LVEGSM V T+RKT DPYII+KARD+I+L++RSVP  QA ++L 
Sbjct: 60  LVEQCVAEHHLKAELDLVEGSMVVKTSRKTWDPYIIIKARDMIKLMARSVPFEQAKRVLQ 119

Query: 61  DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
           D++ CDIIKIGNLV  KE+FVKRRQ L+GPN +TLK++E+LT CY+LVQGNTVAA+G +K
Sbjct: 120 DDIGCDIIKIGNLVHKKEKFVKRRQRLIGPNGATLKSIELLTDCYVLVQGNTVAALGPYK 179

Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNVKQKKV 180
           GL+QVR IV + M N +HP+Y+IK LM+K+EL KDP LANE+W RFLPKFK KN+ ++K 
Sbjct: 180 GLQQVRDIVVETMNN-VHPIYNIKALMIKRELMKDPRLANEDWSRFLPKFKNKNISKRKQ 238

Query: 181 KSKEKKP--YTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKRK 238
              +K    YTPFPP    SK+ K L SGEYFL++ +K++K+ QE+  KQA+       +
Sbjct: 239 PKVKKAKKEYTPFPPAQPESKVGKQLASGEYFLNKEQKQAKRQQERSAKQADAAKRQDER 298

Query: 239 RDAAFIPPEE 248
           R+  F+PP E
Sbjct: 299 RNKDFVPPTE 308


>sp|B4LTY6|KRR1_DROVI KRR1 small subunit processome component homolog OS=Drosophila
           virilis GN=dbe PE=3 SV=1
          Length = 343

 Score =  288 bits (736), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 154/283 (54%), Positives = 206/283 (72%), Gaps = 5/283 (1%)

Query: 1   MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
           +V+  + E+ +  EL+LVEGSM V TTRKT DPYII+K+RD+I+L++RSVP  QA ++L 
Sbjct: 61  LVQQCVAEHHLKAELDLVEGSMVVKTTRKTWDPYIIIKSRDMIKLMARSVPFEQAKRVLQ 120

Query: 61  DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
           D++ CDIIKIGNLV  KE+FVKRRQ L+GPN +TLK++E+LT CY+LVQGNTV+A+G +K
Sbjct: 121 DDIGCDIIKIGNLVHKKEKFVKRRQRLIGPNGATLKSIELLTDCYVLVQGNTVSALGPYK 180

Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNVKQKKV 180
           GL+QVR IV + M N +HP+Y+IK LM+K+EL KDP LANE+W RFLPKFK KN+ ++K 
Sbjct: 181 GLQQVRDIVLETMNN-VHPIYNIKALMIKRELMKDPKLANEDWSRFLPKFKNKNISKRKQ 239

Query: 181 KSKEKKP--YTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKRK 238
              +K    YTPFPP    SKIDK L +GEYFL++ +K++KK QE+  KQAE   +   +
Sbjct: 240 PKNKKPKKEYTPFPPAQPESKIDKQLATGEYFLNKEQKQAKKQQERSVKQAEAAKKQDER 299

Query: 239 RDAAFIPPEE--PSRQNSCEAEDKTNDVAAMAKSLKEKAKKLR 279
           R+  F+PP E  PS+     AE    DV A+   L +  KK R
Sbjct: 300 RNKDFVPPTEDAPSQSRKRPAETSKVDVDALKAKLMKANKKNR 342


>sp|Q54UU6|KRR1_DICDI KRR1 small subunit processome component homolog OS=Dictyostelium
           discoideum GN=krr1 PE=3 SV=1
          Length = 374

 Score =  276 bits (706), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 144/253 (56%), Positives = 187/253 (73%), Gaps = 3/253 (1%)

Query: 1   MVKGALKEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILD 60
           +V+  L E+G+ C+L+L+EGSMTV+TT+K  DP  I+KARDLI+LLSRSVP   A K+L+
Sbjct: 78  LVENVLHEHGIECKLDLIEGSMTVTTTKKCWDPVAILKARDLIKLLSRSVPFEHAQKVLN 137

Query: 61  DEMQCDIIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFK 120
           D+  CDIIKIG  VRNKERFVKRRQ LVGP+ STLKA+E+LT CY+LVQGNTV+++G + 
Sbjct: 138 DDYNCDIIKIGGFVRNKERFVKRRQRLVGPDGSTLKAIELLTKCYVLVQGNTVSSIGPWN 197

Query: 121 GLKQVRRIVEDCMQNKMHPVYHIKILMVKKELEKDPALANENWDRFLPKFKKKNVKQKKV 180
           GL QVR+IVEDC++N +HP+Y+IK LM+K+ELEKD  L NENW+R+LP+FKK N  +KK 
Sbjct: 198 GLVQVRKIVEDCLKN-IHPIYNIKELMIKRELEKDETLKNENWERYLPQFKKTNQNKKKK 256

Query: 181 KSKEK--KPYTPFPPPPQPSKIDKLLESGEYFLSERKKESKKWQEKQEKQAEKTAENKRK 238
             K+K  +   PF PP  P K D  +ESGEYF SE KK  K   +++ K AE   + K +
Sbjct: 257 VQKKKKDRDAAPFAPPQLPRKEDLAMESGEYFASEEKKRRKIQADREAKHAESDQKRKDE 316

Query: 239 RDAAFIPPEEPSR 251
           R  + I P E  R
Sbjct: 317 RQKSQIAPAEKDR 329


>sp|Q57885|Y443_METJA KH domain-containing protein MJ0443 OS=Methanocaldococcus
           jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
           10045 / NBRC 100440) GN=MJ0443 PE=4 SV=1
          Length = 227

 Score = 69.3 bits (168), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 71/133 (53%), Gaps = 1/133 (0%)

Query: 7   KEYGVSCELNLVEGSMTVSTTRKTRDPYIIVKARDLIRLLSRSVPAPQAIKILDDEMQCD 66
           KE GV  E++  +G++T+  T K +DP  + KARD++R + R      A+K++ DE   +
Sbjct: 42  KELGVKLEID-ADGTVTIYGTDKQKDPLAVWKARDIVRAIGRGFNPEIALKLVSDEYVLE 100

Query: 67  IIKIGNLVRNKERFVKRRQHLVGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVR 126
           +I I +   +     + +  ++G    + + +E LTG  + V GNTVA +G  + ++  +
Sbjct: 101 VIDIEDYASSDNSIRRLKGRVIGKEGKSRRYIESLTGANVSVYGNTVAIVGEHEPVQIAK 160

Query: 127 RIVEDCMQNKMHP 139
             VE  ++   H 
Sbjct: 161 EAVEMLLRGASHA 173


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.312    0.129    0.361 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 114,002,270
Number of Sequences: 539616
Number of extensions: 4880723
Number of successful extensions: 30853
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 1002
Number of HSP's that attempted gapping in prelim test: 25585
Number of HSP's gapped (non-prelim): 3957
length of query: 307
length of database: 191,569,459
effective HSP length: 117
effective length of query: 190
effective length of database: 128,434,387
effective search space: 24402533530
effective search space used: 24402533530
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)