Your job contains 1 sequence.
>021816
MKWETEVISPASYISSSNWLLEESKSTRWTAAENKMFENALAVYDKDSPDRWQKVAAMIP
GKTVVDVIKQYKELEADISNIEAGLIPLPGYGNSSPFTLEWVNNHGYDGFKHPYAVGGKR
SSSVRPAEHERKKGVPWTEEEHKLFLLGLKKHGKGDWRNISRNFVTSRTPTQVASHAQKY
FIRQLSGGKDKRRASIHDITTVNLNETRTSSPDTQRAPSPEQVTSGLSQQQPNCGGALSR
TNFQWHQPNNGATTAFGSTQGNMFMTSPYGINSYGIKMPGQNLQRDAVHEPYFGLQNLAF
QMQFPQG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021816
(307 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q8S9H7 - symbol:DIVARICATA "Transcription facto... 947 3.3e-95 1
TAIR|locus:2042872 - symbol:AT2G38090 species:3702 "Arabi... 719 4.8e-71 1
TAIR|locus:2154508 - symbol:AT5G58900 species:3702 "Arabi... 692 3.5e-68 1
TAIR|locus:2150149 - symbol:AT5G01200 species:3702 "Arabi... 541 3.5e-52 1
TAIR|locus:2166459 - symbol:AT5G05790 species:3702 "Arabi... 499 9.8e-48 1
TAIR|locus:2074723 - symbol:AT3G11280 species:3702 "Arabi... 497 1.6e-47 1
TAIR|locus:2159607 - symbol:AT5G08520 species:3702 "Arabi... 366 1.2e-33 1
TAIR|locus:2175478 - symbol:AT5G04760 species:3702 "Arabi... 337 1.4e-30 1
TAIR|locus:2171711 - symbol:AT5G23650 species:3702 "Arabi... 292 8.4e-26 1
TAIR|locus:2028461 - symbol:AT1G49010 species:3702 "Arabi... 258 3.4e-22 1
TAIR|locus:2133667 - symbol:AT4G09450 species:3702 "Arabi... 167 2.0e-19 2
TAIR|locus:2094942 - symbol:AT3G16350 species:3702 "Arabi... 231 5.4e-19 1
TAIR|locus:2151621 - symbol:AT5G61620 species:3702 "Arabi... 225 1.1e-18 1
TAIR|locus:2011216 - symbol:AT1G19000 species:3702 "Arabi... 220 3.6e-18 1
TAIR|locus:2075775 - symbol:AT3G10580 species:3702 "Arabi... 169 7.6e-17 2
TAIR|locus:2171519 - symbol:AT5G47390 species:3702 "Arabi... 212 1.2e-16 1
TAIR|locus:2025182 - symbol:RL6 "RAD-like 6" species:3702... 202 2.9e-16 1
TAIR|locus:2020653 - symbol:AT1G70000 species:3702 "Arabi... 198 7.7e-16 1
TAIR|locus:2016417 - symbol:RL5 "RAD-like 5" species:3702... 198 7.7e-16 1
TAIR|locus:2136283 - symbol:RL1 "RAD-like 1" species:3702... 190 5.4e-15 1
UNIPROTKB|Q58FS3 - symbol:RAD "Transcription factor RADIA... 187 1.2e-14 1
TAIR|locus:2165106 - symbol:AT5G56840 species:3702 "Arabi... 185 2.1e-14 1
TAIR|locus:4010713631 - symbol:RL4 "RAD-like 4" species:3... 185 2.1e-14 1
TAIR|locus:2115260 - symbol:RL3 "RAD-like 3" species:3702... 181 6.4e-14 1
TAIR|locus:2049374 - symbol:MEE3 "MATERNAL EFFECT EMBRYO ... 180 8.6e-14 1
TAIR|locus:2027181 - symbol:AT1G74840 species:3702 "Arabi... 185 3.0e-13 1
TAIR|locus:2075760 - symbol:AT3G10590 species:3702 "Arabi... 149 1.3e-09 1
DICTYBASE|DDB_G0274463 - symbol:mybJ "myb domain-containi... 129 4.1e-07 2
UNIPROTKB|I3LNQ0 - symbol:I3LNQ0 "Uncharacterized protein... 137 2.2e-06 1
UNIPROTKB|I3LSN5 - symbol:I3LSN5 "Uncharacterized protein... 137 2.2e-06 1
UNIPROTKB|F1P3V8 - symbol:DNAJC2 "Uncharacterized protein... 138 2.3e-06 1
MGI|MGI:99470 - symbol:Dnajc2 "DnaJ (Hsp40) homolog, subf... 138 2.3e-06 1
UNIPROTKB|Q1RMH9 - symbol:DNAJC2 "DnaJ homolog subfamily ... 137 3.0e-06 1
UNIPROTKB|Q99543 - symbol:DNAJC2 "DnaJ homolog subfamily ... 137 3.0e-06 1
UNIPROTKB|F1SB54 - symbol:DNAJC2 "Uncharacterized protein... 137 3.0e-06 1
UNIPROTKB|Q4R8H2 - symbol:DNAJC2 "DnaJ homolog subfamily ... 137 3.0e-06 1
UNIPROTKB|E2RS54 - symbol:DNAJC2 "Uncharacterized protein... 137 3.1e-06 1
RGD|620524 - symbol:Dnajc2 "DnaJ (Hsp40) homolog, subfami... 132 1.1e-05 1
UNIPROTKB|Q6P2Y3 - symbol:dnajc2 "DnaJ homolog subfamily ... 130 1.9e-05 1
TAIR|locus:2171494 - symbol:AT5G47290 "AT5G47290" species... 101 6.7e-05 1
ZFIN|ZDB-GENE-040426-1912 - symbol:dnajc2 "DnaJ (Hsp40) h... 121 0.00019 1
>UNIPROTKB|Q8S9H7 [details] [associations]
symbol:DIVARICATA "Transcription factor DIVARICATA"
species:4151 "Antirrhinum majus" [GO:0009908 "flower development"
evidence=IMP] [GO:0048262 "determination of dorsal/ventral
asymmetry" evidence=IMP] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0009908
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 GO:GO:0048262 EMBL:AY077453
ProteinModelPortal:Q8S9H7 Uniprot:Q8S9H7
Length = 307
Score = 947 (338.4 bits), Expect = 3.3e-95, P = 3.3e-95
Identities = 179/302 (59%), Positives = 226/302 (74%)
Query: 6 EVISPASYISSSNWLLEESKST-RWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTV 64
E+++P+SY SSS+W LEES+ST RWTAAENK FENALAV+D+++P+RW++VA +PGKTV
Sbjct: 2 EILAPSSYFSSSSWFLEESRSTTRWTAAENKAFENALAVFDENTPNRWERVAERVPGKTV 61
Query: 65 VDVIKQYKELEADISNIEAGLIPLPGYGNSSPFTLEWVNNHGYDGFKHPYAVGGKRSSSV 124
DV++QYKELE D+S+IEAG +P+PGY SSPFTLEW + HG+DGFK Y GG++SSS
Sbjct: 62 GDVMRQYKELEDDVSSIEAGFVPVPGYSTSSPFTLEWGSGHGFDGFKQSYGTGGRKSSSG 121
Query: 125 RPAEHERKKGVPWTXXXXXXXXXXXXXXXXXDWRNISRNFVTSRTPTQVASHAQKYFIRQ 184
RP+E ERKKGVPWT DWRNISRNFV +RTPTQVASHAQKYFIRQ
Sbjct: 122 RPSEQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQ 181
Query: 185 LSGGKDKRRASIHDITTVNLNETRTSSPDTQRAPS-PEQVTSGLSQQQPNCGGALSRTNF 243
LSGGKDKRRASIHDITTVNL++ +T SPD ++ PS P+ ++QQQ + ++ + F
Sbjct: 182 LSGGKDKRRASIHDITTVNLSDNQTPSPDNKKPPSSPDH---SMAQQQTS-STSIHKLPF 237
Query: 244 QWHQPNNGATTAFGST--QGNMFMTSPYGINSYGIKMPGQNLQRDAVHEPYFGLQNLAFQ 301
QW Q +N F S+ GNMF ++P+G+NSYG KM GQ +QR + Y G QN+AFQ
Sbjct: 238 QWDQTSNETIMGFASSGHHGNMFQSNPFGMNSYGFKMQGQQMQRGGFCDTYLGSQNMAFQ 297
Query: 302 MQ 303
MQ
Sbjct: 298 MQ 299
>TAIR|locus:2042872 [details] [associations]
symbol:AT2G38090 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002685 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT006122 EMBL:AY519529
EMBL:AK118135 IPI:IPI00542058 RefSeq:NP_181344.2 UniGene:At.46819
ProteinModelPortal:Q8GXN7 SMR:Q8GXN7 EnsemblPlants:AT2G38090.1
GeneID:818387 KEGG:ath:AT2G38090 TAIR:At2g38090
HOGENOM:HOG000237920 InParanoid:Q8GXN7 OMA:HRQFLMG PhylomeDB:Q8GXN7
ProtClustDB:CLSN2918198 Genevestigator:Q8GXN7 Uniprot:Q8GXN7
Length = 298
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 153/296 (51%), Positives = 192/296 (64%)
Query: 6 EVISPASYISSSNWLLEESKSTRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVV 65
EV+SPA+Y+ +SNWL +E++ T+WTA ENK FENALA YDKD+PDRW +VAAM+PGKTV
Sbjct: 6 EVMSPATYLETSNWLFQENRGTKWTAEENKKFENALAFYDKDTPDRWSRVAAMLPGKTVG 65
Query: 66 DVIKQYKELEADISNIEAGLIPLPGYGNSSPFTLEWVNNHGY---DGFK-HPY---AVGG 118
DVIKQY+ELE D+S+IEAGLIP+PGY + S FTL+W G +GF + Y A GG
Sbjct: 66 DVIKQYRELEEDVSDIEAGLIPIPGYASDS-FTLDWGGYDGASGNNGFNMNGYYFSAAGG 124
Query: 119 KRSSSVRPAEHERKKGVPWTXXXXXXXXXXXXXXXXXDWRNISRNFVTSRTPTQVASHAQ 178
KR S+ R AEHERKKGVPWT DWRNI+RNFVT+RTPTQVASHAQ
Sbjct: 125 KRGSAARTAEHERKKGVPWTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQ 184
Query: 179 KYFIRQLSGGKDKRRASIHDITTVNLNETRTSSPDTQRAPSPEQVTSGLSQQQPNCGGAL 238
KYFIRQ++GGKDKRR+SIHDITTVN+ PD+ A + + T+ P+ GG
Sbjct: 185 KYFIRQVNGGKDKRRSSIHDITTVNI-------PDSPDAAAADNATANAPCSPPSVGGNQ 237
Query: 239 SRTNFQWHQPNNGATTAFGSTQGNMFMTSPYGINS--YGIKMPGQNLQRDAVHEPY 292
T+ +W TA N F + G++S Y K+ Q+ + E Y
Sbjct: 238 RETS-EWEGQTLYDETAAAFYNQNAFSETLLGMSSTPYMAKLQEQSFLNASQFESY 292
>TAIR|locus:2154508 [details] [associations]
symbol:AT5G58900 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB016885
HOGENOM:HOG000237920 EMBL:BT005473 EMBL:AY519533 EMBL:AK118891
IPI:IPI00547099 RefSeq:NP_200698.1 UniGene:At.7757
ProteinModelPortal:Q9FIL9 SMR:Q9FIL9 DNASU:836007
EnsemblPlants:AT5G58900.1 GeneID:836007 KEGG:ath:AT5G58900
TAIR:At5g58900 eggNOG:NOG325121 InParanoid:Q9FIL9 OMA:PFTLDWA
PhylomeDB:Q9FIL9 ProtClustDB:CLSN2914846 ArrayExpress:Q9FIL9
Genevestigator:Q9FIL9 Uniprot:Q9FIL9
Length = 288
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 158/297 (53%), Positives = 190/297 (63%)
Query: 6 EVISPA-SYISSSNWLLEESKS--------TRWTAAENKMFENALAVYDKDSPDRWQKVA 56
EV+ P+ S++S NWL+EE+KS WTAAENK FENALAVYD ++PDRWQKVA
Sbjct: 2 EVMRPSTSHVSGGNWLMEETKSGVAASGEGATWTAAENKAFENALAVYDDNTPDRWQKVA 61
Query: 57 AMIPGKTVVDVIKQYKELEADISNIEAGLIPLPGYGNSSPFTLEWVNNHG-YDGFKHPYA 115
A+IPGKTV DVI+QY +LEAD+S+IEAGLIP+PGY S PFTL+W G +GFK +
Sbjct: 62 AVIPGKTVSDVIRQYNDLEADVSSIEAGLIPVPGYITSPPFTLDWAGGGGGCNGFKPGHQ 121
Query: 116 VGGKRSSSVRPAEHERKKGVPWTXXXXXXXXXXXXXXXXXDWRNISRNFVTSRTPTQVAS 175
V KRS + R E ERKKGVPWT DWRNISRNFV +RTPTQVAS
Sbjct: 122 VCNKRSQAGRSPELERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVAS 181
Query: 176 HAQKYFIRQLSGGKDKRRASIHDITTVNLNETRTSSPDTQRAPSPEQVTSGLSQQQPNCG 235
HAQKYFIRQLSGGKDKRRASIHDITTVNL E +S +T ++ + G Q+
Sbjct: 182 HAQKYFIRQLSGGKDKRRASIHDITTVNLEEE--ASLETNKS----SIVVG--DQRSRL- 232
Query: 236 GALSRTNFQWHQPNNGATTA--FGSTQGNMFMTSPYGINSYGIKMPGQNLQRDAVHE 290
T F W+Q +N T A F T GN G++SYG M G D+ ++
Sbjct: 233 -----TAFPWNQTDNNGTQADAFNITIGNAIS----GVHSYGQVMIGGYNNADSCYD 280
>TAIR|locus:2150149 [details] [associations]
symbol:AT5G01200 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL137189
HOGENOM:HOG000237920 EMBL:AY519530 IPI:IPI00517812 PIR:T45960
RefSeq:NP_195740.1 UniGene:At.27639 ProteinModelPortal:Q9LFB6
SMR:Q9LFB6 EnsemblPlants:AT5G01200.1 GeneID:831676
KEGG:ath:AT5G01200 TAIR:At5g01200 eggNOG:NOG260690
InParanoid:Q9LFB6 OMA:SAANSDY PhylomeDB:Q9LFB6
ProtClustDB:CLSN2916637 ArrayExpress:Q9LFB6 Genevestigator:Q9LFB6
Uniprot:Q9LFB6
Length = 267
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 118/231 (51%), Positives = 146/231 (63%)
Query: 15 SSSNWLLEESKSTRWTAAENKMFENALAVYD-KDSPDRWQKVAAMIPGKTVVDVIKQYKE 73
+++NW+ +E + WTA ENK FE ALA D KD+ + W K+A +IPGKTV DVIK+YKE
Sbjct: 16 ANTNWIFQEVREATWTAEENKRFEKALAYLDDKDNLESWSKIADLIPGKTVADVIKRYKE 75
Query: 74 LEADISNIEAGLIPLPGYGN--SSPFTLEWVNNHGYDGFKHPYAVGGKRSSSVR------ 125
LE D+S+IEAGLIP+PGYG SS ++ + + Y VGGKRSS
Sbjct: 76 LEDDVSDIEAGLIPIPGYGGDASSAANSDYFFGLENSSYGYDYVVGGKRSSPAMTDCFRS 135
Query: 126 PA-EHERKKGVPWTXXXXXXXXXXXXXXXXXDWRNISRNFVTSRTPTQVASHAQKYFIRQ 184
P E ERKKGVPWT DWRNI+++FVT+RTPTQVASHAQKYF+RQ
Sbjct: 136 PMPEKERKKGVPWTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKYFLRQ 195
Query: 185 LSGGKDKRRASIHDITTVNLNETRTSSPDTQR--APSPEQVTSGLSQQQPN 233
L+ GKDKRR+SIHDITTVN+ + S+ T A SP S QPN
Sbjct: 196 LTDGKDKRRSSIHDITTVNIPDADASATATTADVALSPTPANSFDVFLQPN 246
>TAIR|locus:2166459 [details] [associations]
symbol:AT5G05790 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB005237
HOGENOM:HOG000237920 ProtClustDB:CLSN2684400 EMBL:AY519531
EMBL:BT026054 IPI:IPI00544524 RefSeq:NP_196198.1 UniGene:At.32952
ProteinModelPortal:Q9FFJ9 SMR:Q9FFJ9 EnsemblPlants:AT5G05790.1
GeneID:830464 KEGG:ath:AT5G05790 TAIR:At5g05790 eggNOG:NOG242423
InParanoid:Q9FFJ9 OMA:ISRNFVG PhylomeDB:Q9FFJ9 ArrayExpress:Q9FFJ9
Genevestigator:Q9FFJ9 Uniprot:Q9FFJ9
Length = 277
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 106/216 (49%), Positives = 140/216 (64%)
Query: 6 EVISPA-SYISSSN--WLLEES---KSTRWTAAENKMFENALAVYDKDSPDRWQKVAAMI 59
E + P S++ +S+ ++++E +S+ WT ENK FE ALAVY D+PDRW KVAAMI
Sbjct: 2 ETLHPLLSHVPTSDHRFVVQEMMCLQSSSWTKEENKKFERALAVYADDTPDRWFKVAAMI 61
Query: 60 PGKTVVDVIKQYKELEADISNIEAGLIPLPGYGNSSPFTLEWV-NNHGYDGFKHPYAVGG 118
PGKT+ DV++QY +LE D+ +IEAGL+P+PGY + +P + V + +D ++
Sbjct: 62 PGKTISDVMRQYSKLEEDLFDIEAGLVPIPGYRSVTPCGFDQVVSPRDFDAYR------- 114
Query: 119 KRSSSVRPAEHERKKGVPWTXXXXXXXXXXXXXXXXXDWRNISRNFVTSRTPTQVASHAQ 178
K + R + +R+KGVPWT DWRNISRNFV S+TPTQVASHAQ
Sbjct: 115 KLPNGARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQ 174
Query: 179 KYFIRQLSGGKDKRRASIHDITTVNLNETRTSSPDT 214
KY+ RQLSG KDKRR SIHDITTVNL S P +
Sbjct: 175 KYYQRQLSGAKDKRRPSIHDITTVNLLNANLSRPSS 210
>TAIR|locus:2074723 [details] [associations]
symbol:AT3G11280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009751 "response to salicylic acid stimulus" evidence=IEP]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0019344 "cysteine biosynthetic process" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002686 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009739 InterPro:IPR017884 PROSITE:PS51293 EMBL:AC073395
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 UniGene:At.23548 EMBL:AY056180 EMBL:AY091265
EMBL:AY550308 IPI:IPI00541857 RefSeq:NP_187737.1 RefSeq:NP_850558.1
ProteinModelPortal:Q9C773 SMR:Q9C773 STRING:Q9C773 PRIDE:Q9C773
DNASU:820299 EnsemblPlants:AT3G11280.1 EnsemblPlants:AT3G11280.2
GeneID:820299 KEGG:ath:AT3G11280 TAIR:At3g11280 InParanoid:Q9C773
OMA:FEAAINF PhylomeDB:Q9C773 ProtClustDB:CLSN2684400
ArrayExpress:Q9C773 Genevestigator:Q9C773 Uniprot:Q9C773
Length = 263
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 108/198 (54%), Positives = 126/198 (63%)
Query: 8 ISPASYISSSNWLLEESKSTRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDV 67
IS ++ L S S WT ENKMFE ALA+Y +DSPDRW KVA+MIPGKTV DV
Sbjct: 12 ISDHRFVVQEMVSLHSSSSGSWTKEENKMFERALAIYAEDSPDRWFKVASMIPGKTVFDV 71
Query: 68 IKQYKELEADISNIEAGLIPLPGY-GNSSPFTLEWVNNHGYDGFKHPYAVGGKRSSSVRP 126
+KQY +LE D+ +IEAG +P+PGY SSP G+D + KR S R
Sbjct: 72 MKQYSKLEEDVFDIEAGRVPIPGYPAASSPL--------GFDT-----DMCRKRPSGARG 118
Query: 127 AEHERKKGVPWTXXXXXXXXXXXXXXXXXDWRNISRNFVTSRTPTQVASHAQKYFIRQLS 186
++ +RKKGVPWT DWRNISRNFV S+TPTQVASHAQKY+ RQLS
Sbjct: 119 SDQDRKKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKYYQRQLS 178
Query: 187 GGKDKRRASIHDITTVNL 204
G KDKRR SIHDITT NL
Sbjct: 179 GAKDKRRPSIHDITTGNL 196
>TAIR|locus:2159607 [details] [associations]
symbol:AT5G08520 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB006697
HOGENOM:HOG000237920 EMBL:AY072090 EMBL:AY096571 EMBL:AY519532
IPI:IPI00516280 RefSeq:NP_196469.1 UniGene:At.8762
ProteinModelPortal:Q9FNN6 SMR:Q9FNN6 STRING:Q9FNN6 PaxDb:Q9FNN6
PRIDE:Q9FNN6 EnsemblPlants:AT5G08520.1 GeneID:830751
KEGG:ath:AT5G08520 TAIR:At5g08520 eggNOG:NOG259915
InParanoid:Q9FNN6 OMA:NSMNRER PhylomeDB:Q9FNN6
ProtClustDB:CLSN2687300 ArrayExpress:Q9FNN6 Genevestigator:Q9FNN6
Uniprot:Q9FNN6
Length = 298
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 86/221 (38%), Positives = 119/221 (53%)
Query: 22 EESKSTRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKELEADISNI 81
E S + W+ ++ FE ALA +S +RW+K+AA +PGK+V + + Y+ L D++ I
Sbjct: 5 EVSDGSVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVEDVTRI 64
Query: 82 EAGLIPLPGYGNSSPFTLEWVNNH-GYDGFKHPYA----VGGKRSSSVRPAEHERKKGVP 136
E+G +PLP YG SP E N H G +G G + ++ ER+KG+
Sbjct: 65 ESGCVPLPAYG--SP---EGSNGHAGDEGASSKKGGNSHAGESNQAGKSKSDQERRKGIA 119
Query: 137 WTXXXXXXXXXXXXXXXXXDWRNISRNFVTSRTPTQVASHAQKYFIRQLSGGKDKRRASI 196
WT DWR+ISRNFV +RTPTQVASHAQKYFIR S KD+RR+SI
Sbjct: 120 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSI 179
Query: 197 HDITTV-NLNETRTSSPDTQRAPSPEQVTSGLSQQQPNCGG 236
HDIT+V N + + P T + S + + P G
Sbjct: 180 HDITSVGNADVSTPQGPITGQNNSNNNNNNNNNNSSPAVAG 220
>TAIR|locus:2175478 [details] [associations]
symbol:AT5G04760 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010286 "heat acclimation" evidence=RCA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL162972
EMBL:AB008271 UniGene:At.20111 UniGene:At.68528
HOGENOM:HOG000237920 EMBL:AY050976 EMBL:AY091177 EMBL:AY088362
EMBL:AB493736 IPI:IPI00530948 PIR:T48472 RefSeq:NP_196096.1
ProteinModelPortal:Q9LZ21 SMR:Q9LZ21 IntAct:Q9LZ21
EnsemblPlants:AT5G04760.1 GeneID:830354 KEGG:ath:AT5G04760
TAIR:At5g04760 eggNOG:NOG276102 InParanoid:Q9LZ21 OMA:WRNISRW
PhylomeDB:Q9LZ21 ProtClustDB:CLSN2686445 ArrayExpress:Q9LZ21
Genevestigator:Q9LZ21 Uniprot:Q9LZ21
Length = 215
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 81/214 (37%), Positives = 118/214 (55%)
Query: 26 STRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKELEADISNIEAGL 85
S++WT +E+KMFE AL ++ + SP+RW+++A + K+ +V + Y+ L D+ I++G
Sbjct: 3 SSQWTRSEDKMFEQALVLFPEGSPNRWERIADQLH-KSAGEVREHYEVLVHDVFEIDSGR 61
Query: 86 IPLPGYGNSSPFTLEWVNNHGYDGFKHPYAVGGKRSSSVRPAEHERKKGVPWTXXXXXXX 145
+ +P Y + S G+D G+ S + E ERK+G PWT
Sbjct: 62 VDVPDYMDDSAAAAA-----GWDS-------AGQISFGSKHGESERKRGTPWTENEHKLF 109
Query: 146 XXXXXXXXXXDWRNISRNFVTSRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTV--- 202
DWR+ISRN V +RTPTQVASHAQKYF+RQ S K+++R+SIHDITTV
Sbjct: 110 LIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDITTVDAT 169
Query: 203 ------NLNETRTSSPDTQRAPSPEQVTSGLSQQ 230
N++ T Q AP +Q+ S QQ
Sbjct: 170 LAMPGSNMDWTGQHGSPVQ-APQQQQIMSEFGQQ 202
>TAIR|locus:2171711 [details] [associations]
symbol:AT5G23650 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB025633
HOGENOM:HOG000237920 EMBL:DQ056685 IPI:IPI00534696
RefSeq:NP_197754.1 UniGene:At.54959 ProteinModelPortal:Q9LT00
SMR:Q9LT00 EnsemblPlants:AT5G23650.1 GeneID:832430
KEGG:ath:AT5G23650 TAIR:At5g23650 eggNOG:NOG311780
InParanoid:Q9LT00 OMA:HYNILAR PhylomeDB:Q9LT00
ProtClustDB:CLSN2914851 Genevestigator:Q9LT00 Uniprot:Q9LT00
Length = 337
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 87/273 (31%), Positives = 124/273 (45%)
Query: 22 EESKSTRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKELEADISNI 81
E S + W+ ++ FE ALA+Y+ + RW+K+A ++PGKT+ VI+ Y L D+ I
Sbjct: 6 EISVGSSWSKDDDIAFEKALAIYNDKTEIRWKKIATVVPGKTLEQVIEHYNILARDVMLI 65
Query: 82 EAGLIPLPGYGNSSPFTLEWVNNHGYDGFKHPYAVGG---KRSSSVR---PAEHERKKGV 135
E+G + LP Y + F E NH G + GG K S + + +R++GV
Sbjct: 66 ESGCVRLPDYDD---FLEE--PNHNAFGKERSILEGGNDRKYESKHKGKSKLKQKRRRGV 120
Query: 136 PWTXXXXXXXXXXXXXXXXXDWRNISRNFVTSRTPTQVASHAQKYFIRQLSGGKDKRRAS 195
PW DWR+ISR+ V +RT TQVASHAQKYF S K ++R S
Sbjct: 121 PWKPFEHRQFLHGLKKYGKGDWRSISRHCVVTRTSTQVASHAQKYFAHINSEDKKRKRPS 180
Query: 196 IHDITTVNLNETRTSS-PDT-QRAPSPEQVTSGLSQQQPNCGGALSRTNFQWHQP--NNG 251
IHDIT T P T Q+ + S Q +L + H N
Sbjct: 181 IHDITIAENKSISTKQRPITWQKINNNGATASNTQANQTTLQPSLDIPIYGTHNNIWNAQ 240
Query: 252 ATTAFGS-TQGNMFMTSPYGINSYGIKMPGQNL 283
AT +Q + +P N+ P N+
Sbjct: 241 ATQVISQPSQNHPTYDAPIIWNTQVASQPSANI 273
>TAIR|locus:2028461 [details] [associations]
symbol:AT1G49010 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009651 "response
to salt stress" evidence=IEP] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0009751 "response to salicylic acid
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0016556 "mRNA modification" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046686
GO:GO:0009733 GO:GO:0009753 GO:GO:0003677 GO:GO:0009651
GO:GO:0003700 GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009739 EMBL:AC016041 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237920
EMBL:AY086906 EMBL:AY519528 EMBL:BT024862 IPI:IPI00544296
PIR:F96527 RefSeq:NP_564537.1 UniGene:At.38318
ProteinModelPortal:Q9M9A3 SMR:Q9M9A3 STRING:Q9M9A3 PRIDE:Q9M9A3
EnsemblPlants:AT1G49010.1 GeneID:841324 KEGG:ath:AT1G49010
TAIR:At1g49010 eggNOG:NOG253185 InParanoid:Q9M9A3 OMA:YVVPVAY
PhylomeDB:Q9M9A3 ProtClustDB:CLSN2688585 ArrayExpress:Q9M9A3
Genevestigator:Q9M9A3 Uniprot:Q9M9A3
Length = 314
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 79/211 (37%), Positives = 101/211 (47%)
Query: 22 EESKSTRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKELEADISNI 81
EE +W + + AL K + V A+ G+ + K L D +
Sbjct: 27 EEITEDQWNKMSSMVPSKALEEVKKHYQILLEDVKAIENGQVPLPRYHHRKGLIVDEA-A 85
Query: 82 EAGLIPLPGYGNSSPFTLEWVNNHGYDGFKHPYAVGGKRSSSVRPAEHERKKGVPWTXXX 141
A P +SS + E N G G + G RS R AE ER+KG+PWT
Sbjct: 86 AAATSPANRDSHSSGSS-EKKPNPGTSGIS---SSNGGRSGGSR-AEQERRKGIPWTEEE 140
Query: 142 XXXXXXXXXXXXXXDWRNISRNFVTSRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITT 201
DWR+ISRNFV SRTPTQVASHAQKYFIR S +D+RR+SIHDITT
Sbjct: 141 HRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITT 200
Query: 202 VNLNETRTSSPDTQRAPSPEQVTSGLSQQQP 232
VN N+ + Q+ P+ V +Q QP
Sbjct: 201 VN-NQAPAVTGGGQQ---PQVVKHRPAQPQP 227
Score = 142 (55.0 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 23 ESKSTRWTAAENKMFENALAVY---DKDSPDRWQKVAAMIPGKTVVDVIKQYKELEADIS 79
ES W+ E K FENA+A++ ++ + D+W K+++M+P K + +V K Y+ L D+
Sbjct: 2 ESVVATWSREEEKAFENAIALHCVEEEITEDQWNKMSSMVPSKALEEVKKHYQILLEDVK 61
Query: 80 NIEAGLIPLPGY 91
IE G +PLP Y
Sbjct: 62 AIENGQVPLPRY 73
>TAIR|locus:2133667 [details] [associations]
symbol:AT4G09450 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL161514
HOGENOM:HOG000237920 EMBL:AY122911 IPI:IPI00520050 PIR:C85096
RefSeq:NP_192683.1 UniGene:At.33693 ProteinModelPortal:Q9M0P7
SMR:Q9M0P7 DNASU:826528 EnsemblPlants:AT4G09450.1 GeneID:826528
KEGG:ath:AT4G09450 TAIR:At4g09450 eggNOG:NOG301281
InParanoid:Q9M0P7 OMA:EGLNKFG PhylomeDB:Q9M0P7
ProtClustDB:CLSN2684024 Genevestigator:Q9M0P7 Uniprot:Q9M0P7
Length = 200
Score = 167 (63.8 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 41/105 (39%), Positives = 56/105 (53%)
Query: 131 RKKGVPWTXXXXXXXXXXXXXXXXXDWRNISRNFVTSRTPTQVASHAQKYFIRQLSGGKD 190
+K G+PW+ DW+NISR V SRT TQVASHAQKYF RQ +
Sbjct: 87 KKTGIPWSEEEQRLFLEGLNKFGKGDWKNISRYCVKSRTSTQVASHAQKYFARQKQESTN 146
Query: 191 KRRASIHDITT-VNLNETRTSSPDTQRAPS-PEQVTSGLSQQQPN 233
+R SIHD+T V +N ++ T + P +Q+ S +Q P+
Sbjct: 147 TKRPSIHDMTLGVAVNVPGSNLESTGQQPHFGDQIPS--NQYYPS 189
Score = 84 (34.6 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 28 RWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKELEADISNIEAGLIP 87
+WT ++K FE AL + SP+ + +A + K V +V Y L DI IE+G
Sbjct: 6 QWTRVDDKRFELALLQIPEGSPNFIENIAYYLQ-KPVKEVEYYYCALVHDIERIESGKYV 64
Query: 88 LPGY 91
LP Y
Sbjct: 65 LPKY 68
>TAIR|locus:2094942 [details] [associations]
symbol:AT3G16350 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
InterPro:IPR001005 InterPro:IPR001878 InterPro:IPR009057
Pfam:PF00249 SMART:SM00343 SMART:SM00717 GO:GO:0046686
EMBL:CP002686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0008270 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:BT005832 IPI:IPI00535787 RefSeq:NP_188256.1
UniGene:At.47678 ProteinModelPortal:Q84TG2 SMR:Q84TG2 PRIDE:Q84TG2
EnsemblPlants:AT3G16350.1 GeneID:820882 KEGG:ath:AT3G16350
TAIR:At3g16350 InParanoid:Q84TG2 OMA:GMATRHE PhylomeDB:Q84TG2
ProtClustDB:CLSN2913348 Genevestigator:Q84TG2 Uniprot:Q84TG2
Length = 387
Score = 231 (86.4 bits), Expect = 5.4e-19, P = 5.4e-19
Identities = 61/143 (42%), Positives = 75/143 (52%)
Query: 93 NSSPFT--LEWVNNHGYDGFKHPYAVGGKRSSSVRPAEHERKKGVPWTXXXXXXXXXXXX 150
N SP + + N H +G+ G SS R ERK+GVPWT
Sbjct: 96 NDSPLSDHARYSNLHHNEGYLSDDPAHGSGSSHRRG---ERKRGVPWTEEEHRLFLVGLQ 152
Query: 151 XXXXXDWRNISRNFVTSRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLNETRTS 210
DWR ISRN+VTSRTPTQVASHAQKYFIR S + KRR+S+ D+ T +E T
Sbjct: 153 KLGKGDWRGISRNYVTSRTPTQVASHAQKYFIRHTSSSRRKRRSSLFDMVT---DEMVTD 209
Query: 211 SPDTQRAPSPEQVTSGLS-QQQP 232
S TQ EQ +G S ++P
Sbjct: 210 SSPTQE----EQTLNGSSPSKEP 228
>TAIR|locus:2151621 [details] [associations]
symbol:AT5G61620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001005 InterPro:IPR001878
InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50158 SMART:SM00343
SMART:SM00717 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB012239 IPI:IPI00529008
RefSeq:NP_200970.1 UniGene:At.55665 ProteinModelPortal:Q9FKF9
SMR:Q9FKF9 PaxDb:Q9FKF9 PRIDE:Q9FKF9 EnsemblPlants:AT5G61620.1
GeneID:836284 KEGG:ath:AT5G61620 TAIR:At5g61620 eggNOG:NOG325297
HOGENOM:HOG000152521 InParanoid:Q9FKF9 OMA:HNGHNAR PhylomeDB:Q9FKF9
ProtClustDB:CLSN2713497 Genevestigator:Q9FKF9 Uniprot:Q9FKF9
Length = 317
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 57/155 (36%), Positives = 79/155 (50%)
Query: 78 ISNIEAGLIPLPGYGNSSPFTLEWVNNHGYDGFKHPYAVGGKRSSSVRPAEHERKKGVPW 137
+ N++A L G+ P V++ GY ++ GK + HE+KKG PW
Sbjct: 60 LGNLDALLANDESNGSGDPIAA--VDDTGYHSDGQIHSKKGKTA-------HEKKKGKPW 110
Query: 138 TXXXXXXXXXXXXXXXXXDWRNISRNFVTSRTPTQVASHAQKYFIRQLSGGKDKRRASIH 197
T DWR I+++FV++RTPTQVASHAQKYFIR K KRRAS+
Sbjct: 111 TEEEHRNFLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFIRLNVNDKRKRRASLF 170
Query: 198 DITTVNLNETRTSSPDTQRAPSPEQVTSGLSQQQP 232
DI+ + E +S D P+Q +G+ QQP
Sbjct: 171 DISLEDQKEKERNSQDASTKTPPKQPITGI--QQP 203
>TAIR|locus:2011216 [details] [associations]
symbol:AT1G19000 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC068602
EMBL:AY045881 EMBL:AY079415 EMBL:AK316815 IPI:IPI00546856
PIR:G86323 RefSeq:NP_173334.1 RefSeq:NP_849689.1 UniGene:At.23413
ProteinModelPortal:Q9LMC7 SMR:Q9LMC7 IntAct:Q9LMC7 STRING:Q9LMC7
PRIDE:Q9LMC7 EnsemblPlants:AT1G19000.1 EnsemblPlants:AT1G19000.2
GeneID:838481 KEGG:ath:AT1G19000 TAIR:At1g19000 InParanoid:Q9LMC7
OMA:GYASAND PhylomeDB:Q9LMC7 ProtClustDB:CLSN2682289
ArrayExpress:Q9LMC7 Genevestigator:Q9LMC7 Uniprot:Q9LMC7
Length = 285
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 47/103 (45%), Positives = 60/103 (58%)
Query: 131 RKKGVPWTXXXXXXXXXXXXXXXXXDWRNISRNFVTSRTPTQVASHAQKYFIRQLSGGKD 190
RK+GVPWT DW+ ISRNFV SRTPTQVASHAQKYF+R+ + +
Sbjct: 98 RKRGVPWTENEHKRFLIGLQKVGKGDWKGISRNFVKSRTPTQVASHAQKYFLRRTNLNRR 157
Query: 191 KRRASIHDITTVNLNETRTSSPDTQR-APSPE-QVTSGLSQQQ 231
+RR+S+ DITT + E TQ +P PE ++SG Q
Sbjct: 158 RRRSSLFDITTETVTEMAMEQDPTQENSPLPETNISSGQQAMQ 200
>TAIR|locus:2075775 [details] [associations]
symbol:AT3G10580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 EMBL:AC011560 EMBL:AC013428 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237920
ProtClustDB:CLSN2684024 IPI:IPI00530835 RefSeq:NP_187669.1
UniGene:At.53250 ProteinModelPortal:Q9SQY8 SMR:Q9SQY8
EnsemblPlants:AT3G10580.1 GeneID:820225 KEGG:ath:AT3G10580
TAIR:At3g10580 InParanoid:Q9SQY8 OMA:NIAQFLQ PhylomeDB:Q9SQY8
Genevestigator:Q9SQY8 Uniprot:Q9SQY8
Length = 287
Score = 169 (64.5 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 57/168 (33%), Positives = 77/168 (45%)
Query: 131 RKKGVPWTXXXXXXXXXXXXXXXXXDWRNISRNFVTSRTPTQVASHAQKYFIRQLSGGKD 190
+KKG+PW+ DW++ISR VTSR+P QVASHAQKYF+RQ + K
Sbjct: 91 KKKGIPWSPEEHRLFLDGLNKYGKGDWKSISRECVTSRSPMQVASHAQKYFLRQKN--KK 148
Query: 191 KRRASIHDIT-------TV---NLNETRTSSPDTQRAPSPEQVTSGLSQQQPNCGGALSR 240
+R SIHD+T TV NLN ++P P+ SQ G
Sbjct: 149 GKRFSIHDMTLGDAENVTVPVSNLNSMGQQPHFDDQSP-PDHYQDYFSQSNVTIPGC--N 205
Query: 241 TNFQWHQPNNGATTAFGS----TQGNMFMTSPYGINSYGIKMPGQNLQ 284
+F QP G G ++ N+ +T +NS G + P N Q
Sbjct: 206 MHFMGQQPRFGDQIPPGEYHPYSRDNVTVTGS-NLNSIG-QQPHFNDQ 251
Score = 90 (36.7 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 29 WTAAENKMFENALAVYDKD-SPDRWQKVAAMIPGKTVVDVIKQYKELEADISNIEAGLIP 87
W ++K FE AL + + SPD + +A + K + +V Y+ L D++ IE+G P
Sbjct: 8 WKRDDDKRFELALVRFPAEGSPDFLENIAQFLQ-KPLKEVYSYYQALVDDVTLIESGKYP 66
Query: 88 LPGY 91
LP Y
Sbjct: 67 LPKY 70
>TAIR|locus:2171519 [details] [associations]
symbol:AT5G47390 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
InterPro:IPR001005 InterPro:IPR001878 InterPro:IPR009057
Pfam:PF00249 PROSITE:PS50158 SMART:SM00343 SMART:SM00717
GO:GO:0009737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046686
GO:GO:0009753 GO:GO:0009723 GO:GO:0003677 GO:GO:0009651
GO:GO:0008270 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB018117
HOGENOM:HOG000237594 EMBL:AY072077 EMBL:AY096661 EMBL:AY084295
EMBL:AY519516 EMBL:AK226931 IPI:IPI00516324 RefSeq:NP_199550.1
UniGene:At.23392 ProteinModelPortal:Q9LVS0 SMR:Q9LVS0 STRING:Q9LVS0
PaxDb:Q9LVS0 PRIDE:Q9LVS0 EnsemblPlants:AT5G47390.1 GeneID:834786
KEGG:ath:AT5G47390 TAIR:At5g47390 eggNOG:NOG267183
InParanoid:Q9LVS0 OMA:SSRQSAF PhylomeDB:Q9LVS0
ProtClustDB:CLSN2686371 ArrayExpress:Q9LVS0 Genevestigator:Q9LVS0
Uniprot:Q9LVS0
Length = 365
Score = 212 (79.7 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 52/111 (46%), Positives = 65/111 (58%)
Query: 90 GYGNSSPFTLEWVNNH-GYDGFKHPYAVGGKRSSSVRPAEHERKKGVPWTXXXXXXXXXX 148
G G+++P + V +H DG+ V G SSS R ERKKG PWT
Sbjct: 56 GTGSNTPGSPGDVPDHVAGDGYASEDFVAG--SSSSR----ERKKGTPWTEEEHRMFLLG 109
Query: 149 XXXXXXXDWRNISRNFVTSRTPTQVASHAQKYFIRQLSGGKDKRRASIHDI 199
DWR ISRN+VT+RTPTQVASHAQKYFIRQ + + KRR+S+ D+
Sbjct: 110 LQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDM 160
>TAIR|locus:2025182 [details] [associations]
symbol:RL6 "RAD-like 6" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001005 InterPro:IPR009057
SMART:SM00717 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
SUPFAM:SSF46689 PROSITE:PS51293 EMBL:AC025814 HOGENOM:HOG000238103
EMBL:AY519525 EMBL:DQ395346 EMBL:BT026091 IPI:IPI00526625
IPI:IPI00775691 PIR:H96782 RefSeq:NP_001077825.1 RefSeq:NP_177661.1
UniGene:At.64902 ProteinModelPortal:Q1A173 SMR:Q1A173
EnsemblPlants:AT1G75250.2 GeneID:843862 KEGG:ath:AT1G75250
TAIR:At1g75250 eggNOG:NOG253755 InParanoid:Q9FRL6 OMA:PLPNYKT
ProtClustDB:CLSN2682492 ArrayExpress:Q1A173 Genevestigator:Q1A173
Uniprot:Q1A173
Length = 97
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 38/68 (55%), Positives = 47/68 (69%)
Query: 24 SKSTRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKELEADISNIEA 83
S + WT ++NKMFE ALAVYDKD+PDRW VA + GKTV +V + Y L D+ NIE
Sbjct: 7 SSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIET 66
Query: 84 GLIPLPGY 91
G +PLP Y
Sbjct: 67 GRVPLPNY 74
>TAIR|locus:2020653 [details] [associations]
symbol:AT1G70000 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0080167 "response to karrikin" evidence=IEP] InterPro:IPR001005
InterPro:IPR001878 InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50158
SMART:SM00343 SMART:SM00717 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0046686 GO:GO:0009733 GO:GO:0009753
GO:GO:0009723 GO:GO:0003677 GO:GO:0009651 GO:GO:0008270
GO:GO:0003700 GO:GO:0003682 GO:GO:0080167 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC002062
EMBL:BT006413 EMBL:AY519509 EMBL:AK227711 IPI:IPI00529630
PIR:F96722 RefSeq:NP_001185359.1 RefSeq:NP_177158.1
UniGene:At.35354 UniGene:At.67206 ProteinModelPortal:O04544
SMR:O04544 PRIDE:O04544 EnsemblPlants:AT1G70000.1
EnsemblPlants:AT1G70000.2 GeneID:843337 KEGG:ath:AT1G70000
TAIR:At1g70000 eggNOG:NOG270059 HOGENOM:HOG000237594
InParanoid:O04544 OMA:SMNNLSQ PhylomeDB:O04544
ProtClustDB:CLSN2913574 ArrayExpress:O04544 Genevestigator:O04544
Uniprot:O04544
Length = 261
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 43/92 (46%), Positives = 53/92 (57%)
Query: 112 HPYAVGGKRSSSVRPAE---HERKKGVPWTXXXXXXXXXXXXXXXXXDWRNISRNFVTSR 168
+P GG S V A ERK+G PWT DWR ISRNFV +R
Sbjct: 72 NPTDDGGYASDDVVHASGRNRERKRGTPWTEEEHRLFLTGLHKVGKGDWRGISRNFVKTR 131
Query: 169 TPTQVASHAQKYFIRQLSGGKDKRRASIHDIT 200
TPTQVASHAQKYF+R+ + + +RR+S+ DIT
Sbjct: 132 TPTQVASHAQKYFLRRTNQNRRRRRSSLFDIT 163
>TAIR|locus:2016417 [details] [associations]
symbol:RL5 "RAD-like 5" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001005 InterPro:IPR009057
SMART:SM00717 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
SUPFAM:SSF46689 PROSITE:PS51293 InterPro:IPR017877 EMBL:AC025808
HOGENOM:HOG000238103 EMBL:AY519524 EMBL:DQ395347 EMBL:AK119034
EMBL:BT005657 IPI:IPI00517217 IPI:IPI00526097 RefSeq:NP_564087.2
UniGene:At.41742 ProteinModelPortal:Q8GW75 SMR:Q8GW75
EnsemblPlants:AT1G19510.1 GeneID:838537 KEGG:ath:AT1G19510
TAIR:At1g19510 eggNOG:NOG289750 InParanoid:Q8GW75 OMA:HFEQLVH
PhylomeDB:Q8GW75 Genevestigator:Q8GW75 Uniprot:Q8GW75
Length = 100
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 37/68 (54%), Positives = 47/68 (69%)
Query: 24 SKSTRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKELEADISNIEA 83
S S+ WT+ +NKMFE ALAVYDKD+PDRWQ VA + K+ +V + Y L D+ NIE
Sbjct: 7 SSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIEQ 66
Query: 84 GLIPLPGY 91
L+PLP Y
Sbjct: 67 DLVPLPKY 74
>TAIR|locus:2136283 [details] [associations]
symbol:RL1 "RAD-like 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002687 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 EMBL:AL161594 EMBL:AL050351
EMBL:AY519527 EMBL:BT024650 EMBL:DQ375231 IPI:IPI00518965
PIR:T08573 RefSeq:NP_195636.2 UniGene:At.64218
ProteinModelPortal:F4JVB8 SMR:F4JVB8 EnsemblPlants:AT4G39250.1
GeneID:830081 KEGG:ath:AT4G39250 TAIR:At4g39250 eggNOG:NOG329125
HOGENOM:HOG000238103 InParanoid:Q0NZY1 OMA:RHYEILV Uniprot:F4JVB8
Length = 100
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 36/78 (46%), Positives = 49/78 (62%)
Query: 21 LEESKSTRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKELEADISN 80
+ S WTA +NK FE ALA YD+D+P+RWQ VA ++ GKT +V + Y+ L DI++
Sbjct: 6 MSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINS 65
Query: 81 IEAGLIPLPGYGNSSPFT 98
IE G +P P Y S T
Sbjct: 66 IENGHVPFPNYRTSGGCT 83
>UNIPROTKB|Q58FS3 [details] [associations]
symbol:RAD "Transcription factor RADIALIS" species:4151
"Antirrhinum majus" [GO:0009908 "flower development" evidence=IMP]
[GO:0048262 "determination of dorsal/ventral asymmetry"
evidence=IMP] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0009908 GO:GO:0048262
EMBL:AY954971 PDB:2CJJ PDBsum:2CJJ ProteinModelPortal:Q58FS3
SMR:Q58FS3 EvolutionaryTrace:Q58FS3 Uniprot:Q58FS3
Length = 93
Score = 187 (70.9 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 35/63 (55%), Positives = 43/63 (68%)
Query: 29 WTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKELEADISNIEAGLIPL 88
W+A ENK FE ALAVYDKD+PDRW VA + G+T +V K Y+ L DI IE+G +P
Sbjct: 11 WSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIESGKVPF 70
Query: 89 PGY 91
P Y
Sbjct: 71 PNY 73
>TAIR|locus:2165106 [details] [associations]
symbol:AT5G56840 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001005 InterPro:IPR001878
InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50158 SMART:SM00343
SMART:SM00717 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB013392
HOGENOM:HOG000237594 EMBL:AY519517 EMBL:BT012528 EMBL:BT014956
IPI:IPI00548744 RefSeq:NP_200495.1 UniGene:At.29361
ProteinModelPortal:Q9FJS9 SMR:Q9FJS9 EnsemblPlants:AT5G56840.1
GeneID:835786 KEGG:ath:AT5G56840 TAIR:At5g56840 eggNOG:NOG244478
InParanoid:Q9FJS9 OMA:ESNIRPI PhylomeDB:Q9FJS9
ProtClustDB:CLSN2916792 Genevestigator:Q9FJS9 Uniprot:Q9FJS9
Length = 233
Score = 185 (70.2 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 39/83 (46%), Positives = 50/83 (60%)
Query: 130 ERKKGVPWTXXXXXXXXXXXXXXXXXDWRNISRNFVTSRTPTQVASHAQKYFIRQLSGGK 189
+RKKGVPWT DWR ISRNFV +++PTQVASHAQKYF+RQ +
Sbjct: 86 DRKKGVPWTAEEHRTFLIGLEKLGKGDWRGISRNFVVTKSPTQVASHAQKYFLRQTTTLH 145
Query: 190 DKRR-ASIHDITTV-NLNETRTS 210
KRR S+ D+ + N+ E T+
Sbjct: 146 HKRRRTSLFDMVSAGNVEENSTT 168
>TAIR|locus:4010713631 [details] [associations]
symbol:RL4 "RAD-like 4" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:AC006439 EMBL:DQ487660 EMBL:DQ652756
EMBL:DQ395345 IPI:IPI00846254 RefSeq:NP_001077912.1
UniGene:At.49279 ProteinModelPortal:Q1G3C4 SMR:Q1G3C4 PRIDE:Q1G3C4
EnsemblPlants:AT2G18328.1 GeneID:5007884 KEGG:ath:AT2G18328
TAIR:At2g18328 eggNOG:NOG285168 OMA:EEDVGHI PhylomeDB:Q1G3C4
ProtClustDB:CLSN2920147 Genevestigator:Q1G3C4 Uniprot:Q1G3C4
Length = 77
Score = 185 (70.2 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 36/77 (46%), Positives = 52/77 (67%)
Query: 20 LLEESKSTR-WTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKELEADI 78
+ S ST WTA E+K FE ALA +DKD+PDRWQK+A + GK+ +V + Y+ L D+
Sbjct: 1 MASSSMSTSSWTAREDKQFEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRDV 60
Query: 79 SNIEAGLIPLPGYGNSS 95
++IE+G P P Y N++
Sbjct: 61 NDIESGRYPQPRYRNTN 77
>TAIR|locus:2115260 [details] [associations]
symbol:RL3 "RAD-like 3" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:AL161589 eggNOG:KOG0724 EMBL:Z99708
EMBL:BT010770 EMBL:BT011255 IPI:IPI00524086 IPI:IPI00944270
PIR:G85431 RefSeq:NP_195375.4 UniGene:At.47987
ProteinModelPortal:Q6NNN0 SMR:Q6NNN0 IntAct:Q6NNN0 PRIDE:Q6NNN0
GeneID:829809 KEGG:ath:AT4G36570 TAIR:At4g36570 PhylomeDB:Q6NNN0
Genevestigator:Q6NNN0 Uniprot:Q6NNN0
Length = 81
Score = 181 (68.8 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 24 SKSTRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKELEADISNIEA 83
S S WT ENK+FE ALA YD+D+PDRW VA + GK+ +V + Y+ L D+++IE+
Sbjct: 7 SSSASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRDVNDIES 66
Query: 84 GLIPLPGY 91
G P P Y
Sbjct: 67 GRYPHPNY 74
>TAIR|locus:2049374 [details] [associations]
symbol:MEE3 "MATERNAL EFFECT EMBRYO ARREST 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0009793 "embryo development ending
in seed dormancy" evidence=IMP] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0010114 "response to red light" evidence=IMP]
InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0010114 GO:GO:0009630
GO:GO:0009793 SUPFAM:SSF46689 PROSITE:PS51293 InterPro:IPR017877
EMBL:AC007119 HOGENOM:HOG000238103 EMBL:AY519526 EMBL:BT008554
EMBL:BT008698 EMBL:AK229516 IPI:IPI00543218 PIR:G84603
RefSeq:NP_179759.1 UniGene:At.43298 ProteinModelPortal:Q9SIJ5
SMR:Q9SIJ5 IntAct:Q9SIJ5 PRIDE:Q9SIJ5 EnsemblPlants:AT2G21650.1
GeneID:816703 KEGG:ath:AT2G21650 TAIR:At2g21650 eggNOG:NOG308303
InParanoid:Q9SIJ5 OMA:KHIESGH PhylomeDB:Q9SIJ5
ProtClustDB:CLSN2683609 Genevestigator:Q9SIJ5 Uniprot:Q9SIJ5
Length = 101
Score = 180 (68.4 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 37/74 (50%), Positives = 46/74 (62%)
Query: 26 STRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKELEADISNIEAGL 85
S WT +NK FE ALAVYD+D+PDRW VA + GKT + +QY L DI +IE G
Sbjct: 11 SGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIESIENGH 70
Query: 86 IPLPGY----GNSS 95
+P P Y GNS+
Sbjct: 71 VPFPDYKTTTGNSN 84
>TAIR|locus:2027181 [details] [associations]
symbol:AT1G74840 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0009751 "response to salicylic acid
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0046686
GO:GO:0009733 GO:GO:0009753 GO:GO:0009723 GO:GO:0003677
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC008263
EMBL:AC013258 HOGENOM:HOG000237594 ProtClustDB:CLSN2682289
EMBL:AY070098 EMBL:AY096393 EMBL:AY519510 IPI:IPI00526439
PIR:H96777 RefSeq:NP_177622.1 UniGene:At.11594
ProteinModelPortal:Q9S7N6 SMR:Q9S7N6 IntAct:Q9S7N6 STRING:Q9S7N6
EnsemblPlants:AT1G74840.1 GeneID:843823 KEGG:ath:AT1G74840
TAIR:At1g74840 InParanoid:Q9S7N6 OMA:GTRREIM PhylomeDB:Q9S7N6
ArrayExpress:Q9S7N6 Genevestigator:Q9S7N6 Uniprot:Q9S7N6
Length = 265
Score = 185 (70.2 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 36/72 (50%), Positives = 47/72 (65%)
Query: 130 ERKKGVPWTXXXXXXXXXXXXXXXXXDWRNISRNFVTSRTPTQVASHAQKYFIRQLSGGK 189
ERK+GVPWT DW+ ISRNFV +RT TQVASHAQKYF+R+ + +
Sbjct: 91 ERKRGVPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQVASHAQKYFLRRSNLNR 150
Query: 190 DKRRASIHDITT 201
+RR+S+ D+TT
Sbjct: 151 RRRRSSLFDMTT 162
>TAIR|locus:2075760 [details] [associations]
symbol:AT3G10590 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002686 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 EMBL:AC011560 EMBL:AC013428 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AY550300 EMBL:DQ446652 IPI:IPI00540507
RefSeq:NP_187670.1 UniGene:At.50167 ProteinModelPortal:Q9SQY9
SMR:Q9SQY9 PRIDE:Q9SQY9 EnsemblPlants:AT3G10590.1 GeneID:820227
KEGG:ath:AT3G10590 TAIR:At3g10590 InParanoid:Q9SQY9
PhylomeDB:Q9SQY9 ArrayExpress:Q9SQY9 Genevestigator:Q9SQY9
Uniprot:Q9SQY9
Length = 206
Score = 149 (57.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 66/221 (29%), Positives = 95/221 (42%)
Query: 24 SKSTRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKELEADI----- 78
+ S RWT +N+ F++AL+ + D+ R VA +P K + +V Y++L D+
Sbjct: 2 ASSPRWTEDDNRRFKSALSQFPPDNK-RLVNVAQHLP-KPLEEVKYYYEKLVNDVYLPKP 59
Query: 79 -SNIEAGLIPLPGYGNSSPFTLEWVNNHGYDGFKHPYAVGGKRSSSVRPAEHERKKGVP- 136
N+ L P + E + N D + P V SS + RKK P
Sbjct: 60 LENVTQHL-QKPMEMEEMKYMYEKMAN---DVNQMPEYVPLAESSQSK----RRKKDTPN 111
Query: 137 -WTXXXXXXXXXXXXXXXXXDWRNISRNFVTSRTPTQVASHAQKYFIRQLSGGKDKRRAS 195
WT S NFV ++TP QV+SHAQ Y+ RQ S K ++R S
Sbjct: 112 PWTEEEHRLFLQGLKKYGEGASTLTSTNFVKTKTPRQVSSHAQ-YYKRQKSDNKKEKRRS 170
Query: 196 IHDITTVNLNETRTSSPDTQRAPSPEQVTSGLSQQQPNCGG 236
I DIT E+ +PD+ P+ SQ Q C G
Sbjct: 171 IFDITL----ESTEGNPDSGNQNPPDD--DDPSQGQGTCLG 205
>DICTYBASE|DDB_G0274463 [details] [associations]
symbol:mybJ "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
dictyBase:DDB_G0274463 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GenomeReviews:CM000151_GR GO:GO:0006351 GO:GO:0003682
EMBL:AAFI02000012 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 RefSeq:XP_644160.1 ProteinModelPortal:Q869R9
EnsemblProtists:DDB0220506 GeneID:8619589 KEGG:ddi:DDB_G0274463
eggNOG:NOG264937 OMA:KGAWKEI Uniprot:Q869R9
Length = 734
Score = 129 (50.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 28/71 (39%), Positives = 43/71 (60%)
Query: 157 WRNISRNFVTSRTPTQVASHAQKYFIRQLSGGKDKRRA---SIHDITTVNLNETRTSSPD 213
W+ I++ FV +RTPTQ+ SHAQKY++RQ K+KR S+ D+ NLN + ++ D
Sbjct: 399 WKEIAQ-FVGTRTPTQIQSHAQKYYLRQKQETKNKRSIHDLSLQDLIDDNLNNSNKNNVD 457
Query: 214 TQRAPSPEQVT 224
+ E+ T
Sbjct: 458 KNKQDDKEKKT 468
Score = 60 (26.2 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 23/72 (31%), Positives = 33/72 (45%)
Query: 238 LSRTNFQWHQPN-NGATTAFGSTQGNMFMTSPYGINSYGIKMPGQNLQRDAVHE----PY 292
L+ N + N NG G+ GNM M S INS+G G L+ H+ P
Sbjct: 573 LNNNNSNNNNSNINGINNNNGNGNGNMDMNSN-NINSFG-NNEGNILRHQNSHQIPPPPP 630
Query: 293 FGLQNLAFQMQF 304
+Q++ +QM F
Sbjct: 631 PPIQHVQYQMDF 642
>UNIPROTKB|I3LNQ0 [details] [associations]
symbol:I3LNQ0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 Gene3D:1.10.287.110
SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076
GeneTree:ENSGT00530000063419 Ensembl:ENSSSCT00000023342
Uniprot:I3LNQ0
Length = 503
Score = 137 (53.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 27 TRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKEL 74
T WT E K+ E AL Y ++P+RW+K+A +PG+T D +K+YKEL
Sbjct: 434 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKEL 481
>UNIPROTKB|I3LSN5 [details] [associations]
symbol:I3LSN5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 Gene3D:1.10.287.110
SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076
GeneTree:ENSGT00530000063419 Ensembl:ENSSSCT00000028055 OMA:HEDSTRD
Uniprot:I3LSN5
Length = 508
Score = 137 (53.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 27 TRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKEL 74
T WT E K+ E AL Y ++P+RW+K+A +PG+T D +K+YKEL
Sbjct: 439 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKEL 486
>UNIPROTKB|F1P3V8 [details] [associations]
symbol:DNAJC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0000085
"G2 phase of mitotic cell cycle" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0030544 "Hsp70 protein binding" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
GO:GO:0005829 GO:GO:0045893 GO:GO:0003677 GO:GO:0006260
GO:GO:0031965 GO:GO:0000085 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 InterPro:IPR017877 PROSITE:PS50090
GeneTree:ENSGT00530000063419 OMA:RWFEAFI EMBL:AADN02036895
IPI:IPI00571328 Ensembl:ENSGALT00000013428 Uniprot:F1P3V8
Length = 621
Score = 138 (53.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 26 STRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKEL 74
S+ WT E K+ E AL Y ++P+RW+K+AA +PG++ D +K+YKEL
Sbjct: 551 SSPWTTEEQKLLEQALKTYPVNTPERWEKIAAAVPGRSKKDCMKRYKEL 599
>MGI|MGI:99470 [details] [associations]
symbol:Dnajc2 "DnaJ (Hsp40) homolog, subfamily C, member 2"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005829
"cytosol" evidence=ISO] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030544 "Hsp70 protein binding" evidence=ISO] [GO:0042393
"histone binding" evidence=ISO] [GO:0043130 "ubiquitin binding"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:2000279 "negative regulation of
DNA biosynthetic process" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 InterPro:IPR001623
InterPro:IPR018253 Pfam:PF00226 MGI:MGI:99470 GO:GO:0005829
GO:GO:0005634 GO:GO:0045893 GO:GO:0030308 GO:GO:0003677
GO:GO:0006260 GO:GO:0031965 GO:GO:0000085 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 InterPro:IPR017930 GO:GO:0043130
GeneTree:ENSGT00530000063419 CTD:27000 eggNOG:COG5269
HOGENOM:HOG000006900 HOVERGEN:HBG008782 KO:K09522 OMA:RWFEAFI
OrthoDB:EOG4D26PN EMBL:D63784 EMBL:AK131964 EMBL:BC052027
EMBL:U53208 IPI:IPI00126317 PIR:A57591 RefSeq:NP_033610.1
UniGene:Mm.266312 ProteinModelPortal:P54103 SMR:P54103
STRING:P54103 PhosphoSite:P54103 PaxDb:P54103 PRIDE:P54103
Ensembl:ENSMUST00000030771 GeneID:22791 KEGG:mmu:22791
UCSC:uc008woy.1 InParanoid:P54103 NextBio:303379 Bgee:P54103
CleanEx:MM_DNAJC2 Genevestigator:P54103
GermOnline:ENSMUSG00000029014 Uniprot:P54103
Length = 621
Score = 138 (53.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 26 STRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKEL 74
ST WT E K+ E AL Y ++P+RW+K+A +PG+T D +++YKEL
Sbjct: 551 STPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMRRYKEL 599
>UNIPROTKB|Q1RMH9 [details] [associations]
symbol:DNAJC2 "DnaJ homolog subfamily C member 2"
species:9913 "Bos taurus" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0043130 "ubiquitin binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0030544 "Hsp70 protein
binding" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0000085 "G2 phase of mitotic cell cycle" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253
Pfam:PF00226 GO:GO:0005829 GO:GO:0005634 GO:GO:0045893
GO:GO:0003677 GO:GO:0006260 GO:GO:0031965 GO:GO:0000085
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 GO:GO:0043130 InterPro:IPR017877
GeneTree:ENSGT00530000063419 EMBL:BC114887 IPI:IPI00703453
RefSeq:NP_001068805.1 UniGene:Bt.61294 ProteinModelPortal:Q1RMH9
STRING:Q1RMH9 PRIDE:Q1RMH9 Ensembl:ENSBTAT00000004925 GeneID:507897
KEGG:bta:507897 CTD:27000 eggNOG:COG5269 HOGENOM:HOG000006900
HOVERGEN:HBG008782 InParanoid:Q1RMH9 KO:K09522 OMA:RWFEAFI
OrthoDB:EOG4D26PN NextBio:20868264 Uniprot:Q1RMH9
Length = 621
Score = 137 (53.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 27 TRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKEL 74
T WT E K+ E AL Y ++P+RW+K+A +PG+T D +K+YKEL
Sbjct: 552 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKEL 599
>UNIPROTKB|Q99543 [details] [associations]
symbol:DNAJC2 "DnaJ homolog subfamily C member 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0000085 "G2
phase of mitotic cell cycle" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0030308 "negative regulation of cell
growth" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0030544 "Hsp70 protein binding" evidence=IPI] [GO:0051083 "'de
novo' cotranslational protein folding" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
GO:GO:0005829 GO:GO:0045893 GO:GO:0030308 GO:GO:0003677
GO:GO:0006260 GO:GO:0031965 GO:GO:0000085 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 GO:GO:0043130 CTD:27000 eggNOG:COG5269
HOGENOM:HOG000006900 HOVERGEN:HBG008782 KO:K09522 OMA:RWFEAFI
EMBL:X98260 EMBL:AC004668 EMBL:BC000859 EMBL:BC139751
IPI:IPI00455199 IPI:IPI00830108 RefSeq:NP_001123359.1
RefSeq:NP_055192.1 UniGene:Hs.558476 ProteinModelPortal:Q99543
SMR:Q99543 STRING:Q99543 PhosphoSite:Q99543 DMDM:296439472
PaxDb:Q99543 PRIDE:Q99543 DNASU:27000 Ensembl:ENST00000249270
Ensembl:ENST00000379263 GeneID:27000 KEGG:hsa:27000 UCSC:uc003vbo.3
UCSC:uc010lix.3 GeneCards:GC07M102952 HGNC:HGNC:13192 HPA:HPA020454
MIM:605502 neXtProt:NX_Q99543 PharmGKB:PA162383835
InParanoid:Q99543 GenomeRNAi:27000 NextBio:49486
ArrayExpress:Q99543 Bgee:Q99543 CleanEx:HS_DNAJC2
Genevestigator:Q99543 GermOnline:ENSG00000105821 GO:GO:0051083
Uniprot:Q99543
Length = 621
Score = 137 (53.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 27 TRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKEL 74
T WT E K+ E AL Y ++P+RW+K+A +PG+T D +K+YKEL
Sbjct: 552 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKEL 599
>UNIPROTKB|F1SB54 [details] [associations]
symbol:DNAJC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0030544 "Hsp70
protein binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253
Pfam:PF00226 GO:GO:0005829 GO:GO:0045893 GO:GO:0003677
GO:GO:0031965 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 Gene3D:1.10.287.110
SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076
InterPro:IPR017877 PROSITE:PS50090 GeneTree:ENSGT00530000063419
KO:K09522 EMBL:CU570825 RefSeq:XP_003130290.1
Ensembl:ENSSSCT00000016801 GeneID:100514533 KEGG:ssc:100514533
OMA:FQSWRDF Uniprot:F1SB54
Length = 621
Score = 137 (53.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 27 TRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKEL 74
T WT E K+ E AL Y ++P+RW+K+A +PG+T D +K+YKEL
Sbjct: 552 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKEL 599
>UNIPROTKB|Q4R8H2 [details] [associations]
symbol:DNAJC2 "DnaJ homolog subfamily C member 2"
species:9541 "Macaca fascicularis" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005829
"cytosol" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0043130 "ubiquitin binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226 GO:GO:0005829
GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 GO:GO:0043130 HOVERGEN:HBG008782 OrthoDB:EOG4D26PN
EMBL:AB168480 HSSP:Q96KC8 ProteinModelPortal:Q4R8H2 PRIDE:Q4R8H2
Uniprot:Q4R8H2
Length = 621
Score = 137 (53.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 27 TRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKEL 74
T WT E K+ E AL Y ++P+RW+K+A +PG+T D +K+YKEL
Sbjct: 552 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKEL 599
>UNIPROTKB|E2RS54 [details] [associations]
symbol:DNAJC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 GeneTree:ENSGT00530000063419 OMA:RWFEAFI
EMBL:AAEX03011249 Ensembl:ENSCAFT00000006800 Uniprot:E2RS54
Length = 627
Score = 137 (53.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 27 TRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKEL 74
T WT E K+ E AL Y ++P+RW+K+A +PG+T D +K+YKEL
Sbjct: 558 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKEL 605
>RGD|620524 [details] [associations]
symbol:Dnajc2 "DnaJ (Hsp40) homolog, subfamily C, member 2"
species:10116 "Rattus norvegicus" [GO:0000085 "G2 phase of mitotic
cell cycle" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO;ISS] [GO:0006260
"DNA replication" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0030544 "Hsp70 protein binding" evidence=IEA;ISO]
[GO:0031965 "nuclear membrane" evidence=IEA;ISO] [GO:0042393
"histone binding" evidence=ISO;ISS] [GO:0043130 "ubiquitin binding"
evidence=ISO;ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 InterPro:IPR001623
InterPro:IPR018253 Pfam:PF00226 RGD:620524 GO:GO:0005829
GO:GO:0005634 GO:GO:0045893 GO:GO:0030308 GO:GO:0003677
GO:GO:0006260 GO:GO:0031965 GO:GO:0000085 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 InterPro:IPR017930 GO:GO:0043130
GeneTree:ENSGT00530000063419 CTD:27000 eggNOG:COG5269
HOGENOM:HOG000006900 HOVERGEN:HBG008782 KO:K09522 OrthoDB:EOG4D26PN
HSSP:Q96KC8 EMBL:AY322161 EMBL:AY322163 EMBL:BC088838 EMBL:AF118853
IPI:IPI00358140 IPI:IPI00991289 RefSeq:NP_446228.2 UniGene:Rn.11908
ProteinModelPortal:Q7TQ20 STRING:Q7TQ20 PhosphoSite:Q7TQ20
PRIDE:Q7TQ20 Ensembl:ENSRNOT00000016909 GeneID:116456
KEGG:rno:116456 InParanoid:Q7TQ18 NextBio:618962
Genevestigator:Q7TQ20 Uniprot:Q7TQ20
Length = 621
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 26 STRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKEL 74
S WT E K+ E AL Y ++P+RW+K+A +PG+T D +++YKEL
Sbjct: 551 SIPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMRRYKEL 599
>UNIPROTKB|Q6P2Y3 [details] [associations]
symbol:dnajc2 "DnaJ homolog subfamily C member 2"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0043130 "ubiquitin binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
PROSITE:PS50076 GO:GO:0043130 GeneTree:ENSGT00530000063419
CTD:27000 eggNOG:COG5269 HOGENOM:HOG000006900 HOVERGEN:HBG008782
KO:K09522 OrthoDB:EOG4D26PN EMBL:BC064251 RefSeq:NP_001186412.1
UniGene:Str.15500 ProteinModelPortal:Q6P2Y3 STRING:Q6P2Y3
Ensembl:ENSXETT00000049978 GeneID:394933 KEGG:xtr:394933
Xenbase:XB-GENE-964533 InParanoid:Q6P2Y3 Bgee:Q6P2Y3 Uniprot:Q6P2Y3
Length = 620
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 29 WTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKEL 74
WT E K+ E AL Y ++P+RW+K+A +PG++ D +K+YKEL
Sbjct: 553 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRSKKDCMKRYKEL 598
>TAIR|locus:2171494 [details] [associations]
symbol:AT5G47290 "AT5G47290" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB018117
IPI:IPI00548425 RefSeq:NP_199540.1 UniGene:At.65655
ProteinModelPortal:Q9LVT0 SMR:Q9LVT0 EnsemblPlants:AT5G47290.1
GeneID:834776 KEGG:ath:AT5G47290 TAIR:At5g47290 PhylomeDB:Q9LVT0
ProtClustDB:CLSN2686360 Genevestigator:Q9LVT0 Uniprot:Q9LVT0
Length = 96
Score = 101 (40.6 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 30/69 (43%), Positives = 40/69 (57%)
Query: 28 RWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIK-QYKELEADISNIEAGLI 86
+WT ENK FE AL V DSP + + +AA + +T VD IK Y +L DI+ IE+G
Sbjct: 6 KWTWEENKAFEVAL-VQVPDSPAKLEIIAAQM--RTSVDEIKYHYDKLLQDIAVIESGRD 62
Query: 87 PLPGYGNSS 95
+P Y S
Sbjct: 63 VVPEYSPRS 71
>ZFIN|ZDB-GENE-040426-1912 [details] [associations]
symbol:dnajc2 "DnaJ (Hsp40) homolog, subfamily C,
member 2" species:7955 "Danio rerio" [GO:0003682 "chromatin
binding" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0043130 "ubiquitin binding" evidence=ISS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 InterPro:IPR001623
Pfam:PF00226 ZFIN:ZDB-GENE-040426-1912 GO:GO:0005829 GO:GO:0005634
GO:GO:0045893 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0042393 Gene3D:1.10.287.110 SMART:SM00271
SUPFAM:SSF46565 PROSITE:PS50076 GO:GO:0043130
GeneTree:ENSGT00530000063419 CTD:27000 HOGENOM:HOG000006900
HOVERGEN:HBG008782 KO:K09522 EMBL:BC055125 EMBL:BC067568
IPI:IPI00505401 RefSeq:NP_997976.1 UniGene:Dr.80721
ProteinModelPortal:Q6NWJ4 Ensembl:ENSDART00000103463 GeneID:403080
KEGG:dre:403080 eggNOG:NOG297510 InParanoid:Q6NWJ4 NextBio:20816872
Bgee:Q6NWJ4 Uniprot:Q6NWJ4
Length = 618
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 23 ESKSTRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKEL 74
+S + WT E K+ E AL Y + +RW++++ +PG++ D +K+YKEL
Sbjct: 547 DSNAAAWTTEEQKLLEQALKTYPVSTAERWERISEAVPGRSKKDCMKRYKEL 598
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.128 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 307 290 0.00089 115 3 11 23 0.44 34
33 0.43 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 41
No. of states in DFA: 619 (66 KB)
Total size of DFA: 235 KB (2126 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.32u 0.09s 25.41t Elapsed: 00:00:01
Total cpu time: 25.32u 0.09s 25.41t Elapsed: 00:00:01
Start: Fri May 10 13:42:28 2013 End: Fri May 10 13:42:29 2013