BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021816
(307 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8S9H7|DIV_ANTMA Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA
PE=2 SV=1
Length = 307
Score = 394 bits (1012), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/302 (63%), Positives = 240/302 (79%), Gaps = 8/302 (2%)
Query: 6 EVISPASYISSSNWLLEESKST-RWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTV 64
E+++P+SY SSS+W LEES+ST RWTAAENK FENALAV+D+++P+RW++VA +PGKTV
Sbjct: 2 EILAPSSYFSSSSWFLEESRSTTRWTAAENKAFENALAVFDENTPNRWERVAERVPGKTV 61
Query: 65 VDVIKQYKELEADISNIEAGLIPLPGYGNSSPFTLEWVNNHGYDGFKHPYAVGGKRSSSV 124
DV++QYKELE D+S+IEAG +P+PGY SSPFTLEW + HG+DGFK Y GG++SSS
Sbjct: 62 GDVMRQYKELEDDVSSIEAGFVPVPGYSTSSPFTLEWGSGHGFDGFKQSYGTGGRKSSSG 121
Query: 125 RPAEHERKKGVPWTEEEHKLFLLGLKKHGKGDWRNISRNFVTSRTPTQVASHAQKYFIRQ 184
RP+E ERKKGVPWTEEEHKLFL+GLKK+GKGDWRNISRNFV +RTPTQVASHAQKYFIRQ
Sbjct: 122 RPSEQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQ 181
Query: 185 LSGGKDKRRASIHDITTVNLNETRTSSPDTQRAP-SPEQVTSGLSQQQPNCGGALSRTNF 243
LSGGKDKRRASIHDITTVNL++ +T SPD ++ P SP+ + QQ ++ + F
Sbjct: 182 LSGGKDKRRASIHDITTVNLSDNQTPSPDNKKPPSSPDHSMA----QQQTSSTSIHKLPF 237
Query: 244 QWHQPNNGATTAFGST--QGNMFMTSPYGINSYGIKMPGQNLQRDAVHEPYFGLQNLAFQ 301
QW Q +N F S+ GNMF ++P+G+NSYG KM GQ +QR + Y G QN+AFQ
Sbjct: 238 QWDQTSNETIMGFASSGHHGNMFQSNPFGMNSYGFKMQGQQMQRGGFCDTYLGSQNMAFQ 297
Query: 302 MQ 303
MQ
Sbjct: 298 MQ 299
>sp|Q2V9B0|MY1R1_SOLTU Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1
Length = 297
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/72 (75%), Positives = 64/72 (88%)
Query: 130 ERKKGVPWTEEEHKLFLLGLKKHGKGDWRNISRNFVTSRTPTQVASHAQKYFIRQLSGGK 189
ERK+GVPWTEEEHKLFLLGL+K GKGDWR ISRNFV +RTPTQVASHAQKYF+R+ + +
Sbjct: 90 ERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNR 149
Query: 190 DKRRASIHDITT 201
+RR+S+ DITT
Sbjct: 150 RRRRSSLFDITT 161
>sp|Q1A173|RADL6_ARATH Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1
Length = 97
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 45/63 (71%)
Query: 29 WTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKELEADISNIEAGLIPL 88
WT ++NKMFE ALAVYDKD+PDRW VA + GKTV +V + Y L D+ NIE G +PL
Sbjct: 12 WTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRVPL 71
Query: 89 PGY 91
P Y
Sbjct: 72 PNY 74
>sp|F4JVB8|RADL1_ARATH Protein RADIALIS-like 1 OS=Arabidopsis thaliana GN=RL1 PE=2 SV=1
Length = 100
Score = 77.8 bits (190), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 47/70 (67%)
Query: 29 WTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKELEADISNIEAGLIPL 88
WTA +NK FE ALA YD+D+P+RWQ VA ++ GKT +V + Y+ L DI++IE G +P
Sbjct: 14 WTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIENGHVPF 73
Query: 89 PGYGNSSPFT 98
P Y S T
Sbjct: 74 PNYRTSGGCT 83
>sp|Q869R9|MYBJ_DICDI Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1
Length = 734
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 51/68 (75%), Gaps = 3/68 (4%)
Query: 137 WTEEEHKLFLLGLKKHGKGDWRNISRNFVTSRTPTQVASHAQKYFIRQLSGGKDKRRASI 196
WT+EEH FL G++ HGKG W+ I++ FV +RTPTQ+ SHAQKY++RQ K+KR SI
Sbjct: 379 WTKEEHIRFLNGIQIHGKGAWKEIAQ-FVGTRTPTQIQSHAQKYYLRQKQETKNKR--SI 435
Query: 197 HDITTVNL 204
HD++ +L
Sbjct: 436 HDLSLQDL 443
>sp|Q58FS3|RAD_ANTMA Transcription factor RADIALIS OS=Antirrhinum majus GN=RAD PE=1
SV=1
Length = 93
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 43/63 (68%)
Query: 29 WTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKELEADISNIEAGLIPL 88
W+A ENK FE ALAVYDKD+PDRW VA + G+T +V K Y+ L DI IE+G +P
Sbjct: 11 WSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIESGKVPF 70
Query: 89 PGY 91
P Y
Sbjct: 71 PNY 73
>sp|Q8GW75|RADL5_ARATH Protein RADIALIS-like 5 OS=Arabidopsis thaliana GN=RL5 PE=3 SV=1
Length = 100
Score = 73.6 bits (179), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 41/59 (69%)
Query: 33 ENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKELEADISNIEAGLIPLPGY 91
+NKMFE ALAVYDKD+PDRWQ VA + K+ +V + Y L D+ NIE L+PLP Y
Sbjct: 16 QNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIEQDLVPLPKY 74
>sp|Q9SIJ5|RADL2_ARATH Protein RADIALIS-like 2 OS=Arabidopsis thaliana GN=RL2 PE=2 SV=1
Length = 101
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 43/67 (64%)
Query: 29 WTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKELEADISNIEAGLIPL 88
WT +NK FE ALAVYD+D+PDRW VA + GKT + +QY L DI +IE G +P
Sbjct: 14 WTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIESIENGHVPF 73
Query: 89 PGYGNSS 95
P Y ++
Sbjct: 74 PDYKTTT 80
>sp|Q6NNN0|RADL3_ARATH Protein RADIALIS-like 3 OS=Arabidopsis thaliana GN=RL3 PE=2 SV=1
Length = 81
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%)
Query: 29 WTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKELEADISNIEAGLIPL 88
WT ENK+FE ALA YD+D+PDRW VA + GK+ +V + Y+ L D+++IE+G P
Sbjct: 12 WTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRDVNDIESGRYPH 71
Query: 89 PGY 91
P Y
Sbjct: 72 PNY 74
>sp|Q1G3C4|RADL4_ARATH Protein RADIALIS-like 4 OS=Arabidopsis thaliana GN=RL4 PE=2 SV=1
Length = 77
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%)
Query: 33 ENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKELEADISNIEAGLIPLPGYG 92
E+K FE ALA +DKD+PDRWQK+A + GK+ +V + Y+ L D+++IE+G P P Y
Sbjct: 15 EDKQFEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRDVNDIESGRYPQPRYR 74
Query: 93 NSS 95
N++
Sbjct: 75 NTN 77
>sp|Q54Z40|MYBH_DICDI Myb-like protein H OS=Dictyostelium discoideum GN=mybH PE=3 SV=1
Length = 1217
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 36/168 (21%)
Query: 29 WTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKELEADISNIEAGLIPL 88
WT E ++F A +YDKD+ +K+ + KT++ V
Sbjct: 153 WTKEEERLFVEAYKLYDKDN----KKIQEHVKTKTILQV--------------------- 187
Query: 89 PGYGNSSPFTLEWVNN--HGYDGFKHPYAVGGKRSSSVRPAEHERKKGVPWTEEEHKLFL 146
++ F L+ N D + SSS H PW+ EEH+LFL
Sbjct: 188 --RSHAQKFALKLEKNGIKSLDNIDQLFNQSHAASSSHNLPSH----NTPWSNEEHELFL 241
Query: 147 LGLKKHGKGDWRNISRNFVTSRTPTQVASHAQKYF--IRQLSGGKDKR 192
++K+G+G+W+ IS + SR Q+ +HA+ YF I Q +G K+
Sbjct: 242 KAIEKYGRGNWKLIS-TLIKSRNTLQIKNHARIYFDKISQQNGPPSKK 288
>sp|Q54HX6|MYBI_DICDI Myb-like protein I OS=Dictyostelium discoideum GN=mybI PE=3 SV=1
Length = 977
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 130 ERKKGVPWTEEEHKLFLLGLKKHGKGDWRNISRNFVTSRTPTQVASHAQKYFIR 183
++K+ WT EEH F+ L K+G D ++IS+ +V++R PTQV +HAQKYF+R
Sbjct: 168 KKKQSRYWTPEEHSRFIEALSKYGHKDVKSISQ-YVSTRNPTQVRTHAQKYFLR 220
>sp|P54103|DNJC2_MOUSE DnaJ homolog subfamily C member 2 OS=Mus musculus GN=Dnajc2 PE=1
SV=2
Length = 621
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 26 STRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKEL 74
ST WT E K+ E AL Y ++P+RW+K+A +PG+T D +++YKEL
Sbjct: 551 STPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMRRYKEL 599
>sp|Q4R8H2|DNJC2_MACFA DnaJ homolog subfamily C member 2 OS=Macaca fascicularis GN=DNAJC2
PE=2 SV=1
Length = 621
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 27 TRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKEL 74
T WT E K+ E AL Y ++P+RW+K+A +PG+T D +K+YKEL
Sbjct: 552 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKEL 599
>sp|Q1RMH9|DNJC2_BOVIN DnaJ homolog subfamily C member 2 OS=Bos taurus GN=DNAJC2 PE=2 SV=1
Length = 621
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 27 TRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKEL 74
T WT E K+ E AL Y ++P+RW+K+A +PG+T D +K+YKEL
Sbjct: 552 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKEL 599
>sp|Q99543|DNJC2_HUMAN DnaJ homolog subfamily C member 2 OS=Homo sapiens GN=DNAJC2 PE=1
SV=4
Length = 621
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 27 TRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKEL 74
T WT E K+ E AL Y ++P+RW+K+A +PG+T D +K+YKEL
Sbjct: 552 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKEL 599
>sp|Q7TQ20|DNJC2_RAT DnaJ homolog subfamily C member 2 OS=Rattus norvegicus GN=Dnajc2
PE=2 SV=1
Length = 621
Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 29 WTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKEL 74
WT E K+ E AL Y ++P+RW+K+A +PG+T D +++YKEL
Sbjct: 554 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMRRYKEL 599
>sp|Q6P2Y3|DNJC2_XENTR DnaJ homolog subfamily C member 2 OS=Xenopus tropicalis GN=dnajc2
PE=2 SV=2
Length = 620
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 29 WTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKEL 74
WT E K+ E AL Y ++P+RW+K+A +PG++ D +K+YKEL
Sbjct: 553 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRSKKDCMKRYKEL 598
>sp|Q6NWJ4|DNJC2_DANRE DnaJ homolog subfamily C member 2 OS=Danio rerio GN=dnajc2 PE=2
SV=1
Length = 618
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 23 ESKSTRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKEL 74
+S + WT E K+ E AL Y + +RW++++ +PG++ D +K+YKEL
Sbjct: 547 DSNAAAWTTEEQKLLEQALKTYPVSTAERWERISEAVPGRSKKDCMKRYKEL 598
>sp|Q54IF9|MYBG_DICDI Myb-like protein G OS=Dictyostelium discoideum GN=mybG PE=3 SV=1
Length = 423
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 137 WTEEEHKLFLLGLKKHGKGDWRNISRNFVTSRTPTQVASHAQKYFIR 183
WT+EEH+ FL L + DW+ I +FV S+T Q+ SHAQKYFI+
Sbjct: 44 WTDEEHQKFLEALTLFDR-DWKKI-ESFVGSKTVIQIRSHAQKYFIK 88
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 29 WTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDV 67
WT E++ F AL ++D+D W+K+ + + KTV+ +
Sbjct: 44 WTDEEHQKFLEALTLFDRD----WKKIESFVGSKTVIQI 78
>sp|Q6R0H0|ASG4_ARATH Transcription factor ASG4 OS=Arabidopsis thaliana GN=ASG4 PE=2 SV=1
Length = 287
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 137 WTEEEHKLFLLGLKKHGKGDWRNISRNFVTSRTPTQVASHAQKYFIR-QLSGGKD 190
WTE+EH FL L + DW+ I + FV S+T Q+ SHAQKYF++ Q +G K+
Sbjct: 64 WTEQEHDKFLEALHLFDR-DWKKI-KAFVGSKTVIQIRSHAQKYFLKVQKNGTKE 116
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 29 WTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDV 67
WT E+ F AL ++D+D W+K+ A + KTV+ +
Sbjct: 64 WTEQEHDKFLEALHLFDRD----WKKIKAFVGSKTVIQI 98
>sp|Q5VVJ2|MYSM1_HUMAN Histone H2A deubiquitinase MYSM1 OS=Homo sapiens GN=MYSM1 PE=1 SV=1
Length = 828
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 122 SSVRPAEHERKKGVPWTEEEHKLFLLGLKKHGKGDWRNISRNFVTSRTPTQVASHAQKYF 181
S +PA + V WT EE +LF GL K G+ W IS+ + SRT QV S+A++YF
Sbjct: 110 SPTKPASY----SVKWTIEEKELFEQGLAKFGRR-WTKISK-LIGSRTVLQVKSYARQYF 163
Query: 182 IRQLSGGKDK 191
++ G DK
Sbjct: 164 KNKVKCGLDK 173
Score = 35.0 bits (79), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 24 SKSTRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDV 67
S S +WT E ++FE LA + + RW K++ +I +TV+ V
Sbjct: 116 SYSVKWTIEEKELFEQGLAKFGR----RWTKISKLIGSRTVLQV 155
>sp|Q61712|DNJC1_MOUSE DnaJ homolog subfamily C member 1 OS=Mus musculus GN=Dnajc1 PE=1
SV=1
Length = 552
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 29 WTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKEL 74
WT ++ K+ E AL Y K + DRW K+A +P K+ D I +YK L
Sbjct: 495 WTQSQQKLLELALQQYPKGASDRWDKIAKCVPSKSKEDCIARYKLL 540
>sp|Q96KC8|DNJC1_HUMAN DnaJ homolog subfamily C member 1 OS=Homo sapiens GN=DNAJC1 PE=1
SV=1
Length = 554
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 29 WTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKEL 74
WT + K+ E AL Y + S DRW K+A +P K+ D I +YK L
Sbjct: 497 WTQNQQKLLELALQQYPRGSSDRWDKIARCVPSKSKEDCIARYKLL 542
>sp|P92973|CCA1_ARATH Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 SV=1
Length = 608
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 137 WTEEEHKLFLLGLKKHGKGDWRNISRNFVTSRTPTQVASHAQKYFIR 183
WTEEEH F+ L+ +G+ W+ I + V ++T Q+ SHAQK+F +
Sbjct: 27 WTEEEHNRFIEALRLYGRA-WQKIEEH-VATKTAVQIRSHAQKFFSK 71
>sp|Q6R0H1|LHY_ARATH Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV=2
Length = 645
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 137 WTEEEHKLFLLGLKKHGKGDWRNISRNFVTSRTPTQVASHAQKYFIR 183
WTE+EH+ FL L+ +G+ W+ I + T +T Q+ SHAQK+F +
Sbjct: 27 WTEDEHERFLEALRLYGRA-WQRIEEHIGT-KTAVQIRSHAQKFFTK 71
>sp|Q69Z66|MYSM1_MOUSE Histone H2A deubiquitinase MYSM1 OS=Mus musculus GN=Mysm1 PE=2 SV=2
Length = 819
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 122 SSVRPAEHERKKGVPWTEEEHKLFLLGLKKHGKGDWRNISRNFVTSRTPTQVASHAQKYF 181
S +PA H V WT EE +LF GL K G+ W I+ + SRT QV S+A++YF
Sbjct: 107 SPAKPASH----SVKWTVEEKELFEQGLAKFGRR-WTKIA-TLLKSRTVLQVKSYARQYF 160
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 24 SKSTRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDV 67
S S +WT E ++FE LA + + RW K+A ++ +TV+ V
Sbjct: 113 SHSVKWTVEEKELFEQGLAKFGR----RWTKIATLLKSRTVLQV 152
>sp|P34454|YMA9_CAEEL Uncharacterized protein F54F2.9 OS=Caenorhabditis elegans
GN=F54F2.9 PE=4 SV=3
Length = 414
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 21 LEESKSTRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKEL 74
+EE W+ AE K FE AL Y K + +RW++++ I KT V+ ++K+L
Sbjct: 349 VEEKSEDDWSQAEQKAFETALQKYPKGTDERWERISEEIGSKTKKQVMVRFKQL 402
>sp|Q5F3F2|MYSM1_CHICK Histone H2A deubiquitinase MYSM1 OS=Gallus gallus GN=MYSM1 PE=2
SV=1
Length = 832
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 135 VPWTEEEHKLFLLGLKKHGKGDWRNISRNFVTSRTPTQVASHAQKYF 181
+ WT EE +LF GL K+G+ W I++ + SRT QV S+A++YF
Sbjct: 120 LKWTSEEKELFEQGLVKYGRR-WTKIAK-LIGSRTVLQVKSYARQYF 164
Score = 37.0 bits (84), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 24 SKSTRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDV 67
S S +WT+ E ++FE L Y + RW K+A +I +TV+ V
Sbjct: 117 SYSLKWTSEEKELFEQGLVKYGR----RWTKIAKLIGSRTVLQV 156
>sp|Q6NRB5|TAD2B_XENLA Transcriptional adapter 2-beta OS=Xenopus laevis GN=tada2b PE=2
SV=1
Length = 420
Score = 38.5 bits (88), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 137 WTEEEHKLFLLGLKKHGKGDWRNISRNFVTSRTPTQVASHAQKYFI 182
WT E +L L +++ G G+W +++ + SRTPT+V H +I
Sbjct: 70 WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPTEVMEHYVTMYI 115
>sp|F4IEY4|TRB5_ARATH Telomere repeat-binding factor 5 OS=Arabidopsis thaliana
GN=At1g72740 PE=2 SV=1
Length = 287
Score = 38.5 bits (88), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 137 WTEEEHKLFLLGLKKHGKGDWRNISRN 163
WT EE + L G++KHG G W+NI R+
Sbjct: 8 WTAEEEEALLAGIRKHGPGKWKNILRD 34
>sp|F4I7L1|TRB4_ARATH Telomere repeat-binding factor 4 OS=Arabidopsis thaliana
GN=At1g17520 PE=2 SV=2
Length = 296
Score = 38.1 bits (87), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 135 VPWTEEEHKLFLLGLKKHGKGDWRNISRN 163
+ WT EE + L G++KHG G W+NI R+
Sbjct: 6 LKWTAEEEEALLAGVRKHGPGKWKNILRD 34
>sp|A0JMR6|MYSM1_XENLA Histone H2A deubiquitinase MYSM1 OS=Xenopus laevis GN=mysm1 PE=2
SV=1
Length = 818
Score = 38.1 bits (87), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 135 VPWTEEEHKLFLLGLKKHGKGDWRNISRNFVTSRTPTQVASHAQKYFIRQLS-GGKDKRR 193
V WT+EE LF GL G+ W +I+R + SR+ QV ++A+ YF + G K
Sbjct: 110 VKWTKEEKNLFEQGLATFGRR-WTSIAR-LIGSRSVLQVKNYARHYFKNKCKLEGFVKEE 167
Query: 194 ASIHDITTVNLNETRTSSPDTQRAPS 219
A I + NL + + PD P+
Sbjct: 168 AKIGSLQIPNLQDYE-NEPDITDEPT 192
Score = 31.6 bits (70), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 24 SKSTRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDV 67
S +WT E +FE LA + + RW +A +I ++V+ V
Sbjct: 107 SSPVKWTKEEKNLFEQGLATFGR----RWTSIARLIGSRSVLQV 146
>sp|Q7T105|MIER1_XENLA Mesoderm induction early response protein 1 OS=Xenopus laevis
GN=mier1 PE=2 SV=1
Length = 495
Score = 38.1 bits (87), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 60/148 (40%), Gaps = 29/148 (19%)
Query: 137 WTEEEHKLFLLGLKKHGKGDWRNISRNFVTSRTPTQVA--------SHAQKYFIRQLSGG 188
WTEEE + F GLK +GK D+ I N V +R+ + S +F +Q G
Sbjct: 279 WTEEECRNFEQGLKAYGK-DFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFG 337
Query: 189 KDKRRA--SIHDITTVNLNETRTSSPDTQRAPSPEQVTSGLSQQQPNCGGALSRTNFQWH 246
K K + D L+E+ +++ + RAPSP TS N
Sbjct: 338 KKKYNLHPGVTDYMDRLLDESESAT--SSRAPSPPPTTS----------------NSNTS 379
Query: 247 QPNNGATTAFGSTQGNMFMTSPYGINSY 274
Q TA +TQ + + P I +Y
Sbjct: 380 QSEKEDCTASNNTQNGVSVNGPCAITAY 407
>sp|Q86HX9|MYBK_DICDI Myb-like protein K OS=Dictyostelium discoideum GN=mybK PE=3 SV=1
Length = 894
Score = 38.1 bits (87), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 137 WTEEEHKLFLLGLKKHGKGDWRNISRNFVTSRTPTQVASHAQKYFIRQ 184
WT EEH FL +++ G D+ I++ FV +R QV +H Y Q
Sbjct: 657 WTSEEHNKFLEAVQQFGIKDYHAIAK-FVQTRNHHQVRTHVNTYLKNQ 703
>sp|Q5RGA4|MYSM1_DANRE Histone H2A deubiquitinase MYSM1 OS=Danio rerio GN=mysm1 PE=2 SV=2
Length = 822
Score = 37.0 bits (84), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 137 WTEEEHKLFLLGLKKHGKGDWRNISRNFVTSRTPTQVASHAQKYF 181
W EEE +LF GL + G+ W I++ + +RT QV S+A++YF
Sbjct: 102 WAEEEKELFEKGLAQFGRR-WTKIAK-LIGTRTVLQVKSYAKQYF 144
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
Query: 27 TRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDV---IKQY 71
TRW E ++FE LA + + RW K+A +I +TV+ V KQY
Sbjct: 100 TRWAEEEKELFEKGLAQFGR----RWTKIAKLIGTRTVLQVKSYAKQY 143
>sp|Q5REE1|MIER1_PONAB Mesoderm induction early response protein 1 OS=Pongo abelii
GN=MIER1 PE=2 SV=2
Length = 512
Score = 37.0 bits (84), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 14/117 (11%)
Query: 137 WTEEEHKLFLLGLKKHGKGDWRNISRNFVTSRTPTQVA--------SHAQKYFIRQLSGG 188
WTEEE + F GLK +GK D+ I N V +R+ + S +F +Q G
Sbjct: 288 WTEEECRNFEQGLKAYGK-DFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFG 346
Query: 189 KDKRRA--SIHDITTVNLNETRTSSPDTQRAPSPEQVTSGLSQQQPNC-GGALSRTN 242
K K + D L+E+ +++ + RAPSP S S Q G +S TN
Sbjct: 347 KKKYNLHPGVTDYMDRLLDESESAA--SSRAPSPPPTASNSSNSQSEKEDGTVSTTN 401
>sp|Q8BXJ2|TREF1_MOUSE Transcriptional-regulating factor 1 OS=Mus musculus GN=Trerf1 PE=1
SV=1
Length = 1205
Score = 37.0 bits (84), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 26 STRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQY 71
S +WT+ E K+F ALA Y KD + V M+ KTV ++ Y
Sbjct: 893 SDKWTSLERKLFNKALATYSKD----FIFVQKMVKSKTVAQCVEYY 934
>sp|Q96PN7|TREF1_HUMAN Transcriptional-regulating factor 1 OS=Homo sapiens GN=TRERF1 PE=1
SV=1
Length = 1200
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 26 STRWTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQY 71
S +WT+ E K+F ALA Y KD + V M+ KTV ++ Y
Sbjct: 887 SDKWTSLERKLFNKALATYSKD----FIFVQKMVKSKTVAQCVEYY 928
>sp|Q5RBN9|TAD2B_PONAB Transcriptional adapter 2-beta OS=Pongo abelii GN=TADA2B PE=2 SV=1
Length = 420
Score = 36.6 bits (83), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 137 WTEEEHKLFLLGLKKHGKGDWRNISRNFVTSRTPTQVASHAQKYFI 182
WT E +L L +++ G G+W +++ + SRTP +V H +I
Sbjct: 70 WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYI 115
>sp|Q86TJ2|TAD2B_HUMAN Transcriptional adapter 2-beta OS=Homo sapiens GN=TADA2B PE=1 SV=2
Length = 420
Score = 36.6 bits (83), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 137 WTEEEHKLFLLGLKKHGKGDWRNISRNFVTSRTPTQVASHAQKYFI 182
WT E +L L +++ G G+W +++ + SRTP +V H +I
Sbjct: 70 WTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYI 115
>sp|Q5UAK0|MIER1_MOUSE Mesoderm induction early response protein 1 OS=Mus musculus
GN=Mier1 PE=1 SV=2
Length = 511
Score = 36.2 bits (82), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 14/117 (11%)
Query: 137 WTEEEHKLFLLGLKKHGKGDWRNISRNFVTSRTPTQVA--------SHAQKYFIRQLSGG 188
WTEEE + F GLK +GK D+ I N V +R+ + S +F +Q G
Sbjct: 287 WTEEECRNFEQGLKAYGK-DFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFG 345
Query: 189 KDKRRA--SIHDITTVNLNETRTSSPDTQRAPSPEQVTSGLSQQQPNC-GGALSRTN 242
K K + D L+E+ +++ + RAPSP S S Q GA+S N
Sbjct: 346 KKKYNLHPGVTDYMDRLLDESESAA--SSRAPSPPPTASNSSNSQSEKEDGAVSSRN 400
>sp|Q8N108|MIER1_HUMAN Mesoderm induction early response protein 1 OS=Homo sapiens
GN=MIER1 PE=1 SV=2
Length = 512
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 137 WTEEEHKLFLLGLKKHGKGDWRNISRNFVTSRTPTQVA--------SHAQKYFIRQLSGG 188
WTEEE + F GLK +GK D+ I N V +R+ + S +F +Q G
Sbjct: 288 WTEEECRNFEQGLKAYGK-DFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFG 346
Query: 189 KDKRRA--SIHDITTVNLNETRTSSPDTQRAPSPEQVTSGLSQQQ 231
K K + D L+E+ +++ + RAPSP S S Q
Sbjct: 347 KKKYNLHPGVTDYMDRLLDESESAA--SSRAPSPPPTASNSSNSQ 389
>sp|P52551|MYBB_XENLA Myb-related protein B OS=Xenopus laevis GN=mybl2 PE=2 SV=2
Length = 743
Score = 35.8 bits (81), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 126 PAEHERKKGVPWTEEEHKLFLLGLKKHGKGDWRNISRNF 164
P E + V WT EE + +KKHG+G+W+ I+ N
Sbjct: 23 PEPKENRVKVKWTPEEDETLKALVKKHGQGEWKTIASNL 61
>sp|Q96276|MYB23_ARATH Transcription factor MYB23 OS=Arabidopsis thaliana GN=MYB23 PE=1
SV=1
Length = 219
Score = 35.8 bits (81), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 128 EHERKKGVPWTEEEHKLFLLGLKKHGKGDWRNISR 162
EHE KKG+ WT EE K+ + ++ HG+G W I++
Sbjct: 9 EHEYKKGL-WTVEEDKILMDYVRTHGQGHWNRIAK 42
>sp|Q9SEI0|WER_ARATH Transcription factor WER OS=Arabidopsis thaliana GN=WER PE=1 SV=1
Length = 203
Score = 35.4 bits (80), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 119 KRSSSVRPAEHERKKGVPWTEEEHKLFLLGLKKHGKGDWRNISR 162
K SSS +E KKG+ WT EE K+ + +K HGKG W I++
Sbjct: 4 KVSSSGDEGNNEYKKGL-WTVEEDKILMDYVKAHGKGHWNRIAK 46
>sp|Q5ZKT9|MIER1_CHICK Mesoderm induction early response protein 1 OS=Gallus gallus
GN=MIER1 PE=2 SV=1
Length = 513
Score = 35.0 bits (79), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 137 WTEEEHKLFLLGLKKHGKGDWRNISRNFVTSRTPTQVA--------SHAQKYFIRQLSGG 188
WTEEE + F GLK +GK D+ I N V +R+ + S +F +Q G
Sbjct: 290 WTEEECRNFEQGLKVYGK-DFHVIQANKVRTRSVGECVAFYYMWKKSERYDFFAQQTRFG 348
Query: 189 KDK--RRASIHDITTVNLNETRTSSPDTQRAPSPEQVTSGLSQQQ 231
K K + D L+E+ +++ + RAPSP S S Q
Sbjct: 349 KKKYNLHPGVTDYMDRLLDESESAA--SSRAPSPPPTASNSSTSQ 391
>sp|Q503N9|TAD2B_DANRE Transcriptional adapter 2-beta OS=Danio rerio GN=tada2b PE=2 SV=1
Length = 486
Score = 35.0 bits (79), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 137 WTEEEHKLFLLGLKKHGKGDWRNISRNFVTSRTPTQVASHAQKYFI 182
WT E + L ++++G G+W +++ + SRTP +V H +I
Sbjct: 70 WTSREEQSLLDAIEQYGFGNWEDMAAHVGASRTPQEVMDHYVSMYI 115
>sp|O74839|YC1B_SCHPO Uncharacterized MscS family protein C1183.11 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC1183.11 PE=1 SV=1
Length = 1011
Score = 34.7 bits (78), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Query: 29 WTAAENKMFENALAVYDKDSPDRWQKVAAMIPGKTVVDVIKQYKELEADISNIEAGLIPL 88
++ + ++ + + V+ K D +V MI G ++K+ + + + +I
Sbjct: 638 FSGSAQELLSSIIFVFVKHPYDVGDRVDVMINGTVTSAMVKEISIMSTEFRLLTGKVIQA 697
Query: 89 PGYGNSSPFTLEWVNNHGYDGFKHPYAVGGKRSSSVRPAEHERKKGVPWTEEEHK 143
P NS TL +N DG P V K ++++ E R K + + +EE +
Sbjct: 698 P---NSLLNTLWILNMRRSDGIADPVTVNLKFGTTLQQIEQLRIKIIDFLKEEKR 749
>sp|Q10274|MU152_SCHPO Meiotically up-regulated gene 152 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug152 PE=1 SV=1
Length = 390
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 131 RKKGVPWTEEEHKLFLLGLKKHGKGDWRNI---SRNFVTSRTPTQV 173
RK V WTE+E L G + HG G+W+ I R T+R+P +
Sbjct: 52 RKPRVKWTEKETNDLLRGCQIHGVGNWKKILLDERFHFTNRSPNDL 97
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 124,233,778
Number of Sequences: 539616
Number of extensions: 5314901
Number of successful extensions: 10412
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 10291
Number of HSP's gapped (non-prelim): 176
length of query: 307
length of database: 191,569,459
effective HSP length: 117
effective length of query: 190
effective length of database: 128,434,387
effective search space: 24402533530
effective search space used: 24402533530
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)