Query 021818
Match_columns 307
No_of_seqs 94 out of 96
Neff 3.4
Searched_HMMs 13730
Date Mon Mar 25 09:45:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021818.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021818hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1g73a_ a.7.4.1 (A:) Smac/diab 32.8 12 0.00088 30.6 2.8 39 87-125 102-141 (157)
2 d1riqa1 a.203.1.1 (A:237-457) 23.1 10 0.00073 31.8 0.6 30 18-47 159-188 (221)
3 d1vr3a1 b.82.1.6 (A:1-179) Aci 21.9 17 0.0013 29.8 1.8 20 282-301 65-85 (179)
4 d1kwma2 d.58.3.1 (A:1A-95A) Pr 17.6 17 0.0013 25.8 0.8 28 11-38 17-45 (95)
5 d1q8ha_ g.32.1.1 (A:) Osteocal 16.9 14 0.001 23.4 0.1 10 291-300 15-24 (37)
6 d1rlra1 a.98.1.1 (A:10-221) R1 16.7 24 0.0017 28.6 1.5 12 291-302 66-77 (212)
7 d2cyua1 a.9.1.1 (A:2-40) E3-bi 16.1 26 0.0019 22.0 1.3 14 20-33 5-18 (39)
8 d1a62a1 a.140.3.1 (A:1-47) Rho 14.4 29 0.0021 22.7 1.2 15 16-30 10-24 (47)
9 d2grea2 c.56.5.4 (A:3-73,A:187 13.1 38 0.0028 27.6 1.9 18 17-34 157-174 (233)
10 d1hlva1 a.4.1.7 (A:1-66) DNA-b 12.9 65 0.0048 22.2 2.8 34 11-47 8-52 (66)
No 1
>d1g73a_ a.7.4.1 (A:) Smac/diablo {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.77 E-value=12 Score=30.57 Aligned_cols=39 Identities=23% Similarity=0.123 Sum_probs=30.7
Q ss_pred CccchhcHHHHHHHHHHH-HHHHHHHHHHHHHHhhccccc
Q 021818 87 GTMQFEDTASAAEAAADS-AKKAVAAAQAAAYLASRDSKQ 125 (307)
Q Consensus 87 ~~~qykDv~sAAqAAfES-Aa~AAaAARAAaELSr~e~~~ 125 (307)
|..--.=+..||+|||.+ |++|+.+||-=.+++.....+
T Consensus 102 w~sa~~l~e~aAEAAy~sGAeqAsvta~~~lQ~aqsqV~~ 141 (157)
T d1g73a_ 102 WMTAVGLSEMAAEAAYQTGADQASITARNHIQLVKLQVEE 141 (157)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHH
Confidence 443445678999999998 789999999988888776543
No 2
>d1riqa1 a.203.1.1 (A:237-457) Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) {Aquifex aeolicus [TaxId: 63363]}
Probab=23.11 E-value=10 Score=31.81 Aligned_cols=30 Identities=27% Similarity=0.307 Sum_probs=25.4
Q ss_pred HHHHHHHHHhCccccCchhHHHhcCCcccc
Q 021818 18 KVMKEIAKEFQIDWDTTESEMELLKPAEER 47 (307)
Q Consensus 18 KlLkEIA~E~~I~Wd~~~~E~el~K~~edl 47 (307)
.|..+||+|+||..|...+++.+.++.+..
T Consensus 159 elt~eia~e~gl~vD~~gF~~~m~eqre~S 188 (221)
T d1riqa1 159 DLIDEIAREKGLGIDLEGFQCELEEQRERA 188 (221)
T ss_dssp HHHHHHHHTTTCEECHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhcccHHHHHHHHHHHHHHH
Confidence 578999999999999999998887666554
No 3
>d1vr3a1 b.82.1.6 (A:1-179) Acireductone dioxygenase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.90 E-value=17 Score=29.78 Aligned_cols=20 Identities=25% Similarity=0.441 Sum_probs=16.5
Q ss_pred CCcccCC-CCCChHHHHHHHH
Q 021818 282 SFHRVHP-KLPDYEDLAARFE 301 (307)
Q Consensus 282 ~~~hVHP-KLPDyDdLaARF~ 301 (307)
-...||| +||+||++-++|-
T Consensus 65 D~i~l~p~~~pn~~~~~~~F~ 85 (179)
T d1vr3a1 65 DIITICKDTLPNYEEKIKMFF 85 (179)
T ss_dssp EEEEESTTTSTTHHHHHHHHH
T ss_pred EEEEECCccCCCHHHHHHHHh
Confidence 3467898 5899999999995
No 4
>d1kwma2 d.58.3.1 (A:1A-95A) Procarboxypeptidase B {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.65 E-value=17 Score=25.82 Aligned_cols=28 Identities=25% Similarity=0.513 Sum_probs=21.9
Q ss_pred CCHHHHHHHHHHHHHHhCcc-ccCchhHH
Q 021818 11 PTGEVKLKVMKEIAKEFQID-WDTTESEM 38 (307)
Q Consensus 11 PS~E~KlKlLkEIA~E~~I~-Wd~~~~E~ 38 (307)
|..+..+++|+++++..+++ |.+...+.
T Consensus 17 ~~~~~q~~~L~~L~~~~~ldfW~~~s~~~ 45 (95)
T d1kwma2 17 VEDENHINIIRELASTTQIDFWKPDSVTQ 45 (95)
T ss_dssp ECSHHHHHHHHHHHHHSCEEEEESSSGGG
T ss_pred eCCHHHHHHHHHHhccCceEecCCCCccc
Confidence 55678899999999988877 87765544
No 5
>d1q8ha_ g.32.1.1 (A:) Osteocalcin {Pig (Sus scrofa) [TaxId: 9823]}
Probab=16.91 E-value=14 Score=23.44 Aligned_cols=10 Identities=40% Similarity=0.830 Sum_probs=8.3
Q ss_pred CChHHHHHHH
Q 021818 291 PDYEDLAARF 300 (307)
Q Consensus 291 PDyDdLaARF 300 (307)
||||+||--+
T Consensus 15 pdcdelad~i 24 (37)
T d1q8ha_ 15 PDCDELADHI 24 (37)
T ss_dssp HHHHHHHHHH
T ss_pred CCHHHHHHHh
Confidence 7999999754
No 6
>d1rlra1 a.98.1.1 (A:10-221) R1 subunit of ribonucleotide reductase, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=16.71 E-value=24 Score=28.63 Aligned_cols=12 Identities=58% Similarity=0.935 Sum_probs=10.3
Q ss_pred CChHHHHHHHHH
Q 021818 291 PDYEDLAARFEA 302 (307)
Q Consensus 291 PDyDdLaARF~A 302 (307)
|||..||||+.-
T Consensus 66 PdY~~lAaRi~l 77 (212)
T d1rlra1 66 PDYQYLAARLAI 77 (212)
T ss_dssp TTHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 699999999864
No 7
>d2cyua1 a.9.1.1 (A:2-40) E3-binding domain of dihydrolipoamide succinyltransferase {Escherichia coli [TaxId: 562]}
Probab=16.09 E-value=26 Score=22.05 Aligned_cols=14 Identities=14% Similarity=0.382 Sum_probs=11.2
Q ss_pred HHHHHHHhCccccC
Q 021818 20 MKEIAKEFQIDWDT 33 (307)
Q Consensus 20 LkEIA~E~~I~Wd~ 33 (307)
.+.||+|+||+|..
T Consensus 5 arkla~e~gidl~~ 18 (39)
T d2cyua1 5 IRRLLAEHNLDASA 18 (39)
T ss_dssp HHHHHHHHTCCGGG
T ss_pred HHHHHHHcCCCHHH
Confidence 46799999998764
No 8
>d1a62a1 a.140.3.1 (A:1-47) Rho termination factor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=14.42 E-value=29 Score=22.74 Aligned_cols=15 Identities=0% Similarity=0.257 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHhCcc
Q 021818 16 KLKVMKEIAKEFQID 30 (307)
Q Consensus 16 KlKlLkEIA~E~~I~ 30 (307)
++.=|.+||+|+||+
T Consensus 10 ~~~EL~~iA~~lgIe 24 (47)
T d1a62a1 10 PVSELITLGENMGLE 24 (47)
T ss_dssp CHHHHHHHHHTTTCC
T ss_pred CHHHHHHHHHHcCCC
Confidence 355689999999996
No 9
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]}
Probab=13.14 E-value=38 Score=27.58 Aligned_cols=18 Identities=28% Similarity=0.398 Sum_probs=16.1
Q ss_pred HHHHHHHHHHhCccccCc
Q 021818 17 LKVMKEIAKEFQIDWDTT 34 (307)
Q Consensus 17 lKlLkEIA~E~~I~Wd~~ 34 (307)
.+.|.++|++++|.|+..
T Consensus 157 ~~~l~~~A~~~~I~~Q~~ 174 (233)
T d2grea2 157 RKHLVELAKTNHIEYKVD 174 (233)
T ss_dssp HHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHcCCCcEEe
Confidence 567899999999999987
No 10
>d1hlva1 a.4.1.7 (A:1-66) DNA-binding domain of centromere binding protein B (CENP-B) {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.88 E-value=65 Score=22.20 Aligned_cols=34 Identities=26% Similarity=0.322 Sum_probs=22.1
Q ss_pred CCHHHHHHHHH-----------HHHHHhCccccCchhHHHhcCCcccc
Q 021818 11 PTGEVKLKVMK-----------EIAKEFQIDWDTTESEMELLKPAEER 47 (307)
Q Consensus 11 PS~E~KlKlLk-----------EIA~E~~I~Wd~~~~E~el~K~~edl 47 (307)
=+.+.|++||+ |||.+|||. ..+-..+.|..+..
T Consensus 8 LT~~eK~~ii~~~e~g~k~sq~eIA~~fGv~---~STvs~IlKnK~ki 52 (66)
T d1hlva1 8 LTFREKSRIIQEVEENPDLRKGEIARRFNIP---PSTLSTILKNKRAI 52 (66)
T ss_dssp CCHHHHHHHHHHHHHCTTSCHHHHHHHHTCC---HHHHHHHHHTHHHH
T ss_pred CCHHHHHHHHHHHHcCCcchHHHHHHHhCCC---hhHHHHHHHHHHHH
Confidence 46778888774 689999985 34445555554443
Done!