Query 021822
Match_columns 307
No_of_seqs 122 out of 1341
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 09:49:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021822.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021822hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1b37_A Protein (polyamine oxid 100.0 1.4E-39 4.7E-44 304.3 27.0 298 5-303 164-464 (472)
2 2z3y_A Lysine-specific histone 100.0 9.9E-37 3.4E-41 295.4 24.7 273 6-300 361-660 (662)
3 2xag_A Lysine-specific histone 100.0 5.8E-36 2E-40 294.3 24.3 266 13-300 541-831 (852)
4 4gut_A Lysine-specific histone 100.0 3.2E-34 1.1E-38 280.2 27.1 271 10-296 499-775 (776)
5 1s3e_A Amine oxidase [flavin-c 100.0 7.7E-34 2.6E-38 268.5 25.4 275 9-300 170-456 (520)
6 1rsg_A FMS1 protein; FAD bindi 100.0 1.8E-32 6E-37 258.9 26.4 272 12-301 175-510 (516)
7 2yg5_A Putrescine oxidase; oxi 100.0 7.5E-33 2.6E-37 257.2 23.0 268 10-299 171-452 (453)
8 2vvm_A Monoamine oxidase N; FA 100.0 2.6E-32 8.8E-37 256.5 20.9 268 9-300 212-487 (495)
9 2iid_A L-amino-acid oxidase; f 100.0 1.5E-31 5.1E-36 251.4 20.6 241 43-300 237-486 (498)
10 2jae_A L-amino acid oxidase; o 100.0 5.8E-30 2E-34 240.0 22.8 243 43-301 235-488 (489)
11 3k7m_X 6-hydroxy-L-nicotine ox 100.0 1.6E-29 5.5E-34 233.3 21.5 254 10-297 166-425 (431)
12 3ayj_A Pro-enzyme of L-phenyla 100.0 2.6E-29 8.9E-34 241.3 13.3 271 15-300 318-681 (721)
13 3qj4_A Renalase; FAD/NAD(P)-bi 99.9 7.5E-26 2.5E-30 202.6 20.7 235 36-298 102-342 (342)
14 3i6d_A Protoporphyrinogen oxid 99.9 3.3E-25 1.1E-29 206.3 20.2 263 9-298 174-468 (470)
15 2ivd_A PPO, PPOX, protoporphyr 99.9 4E-25 1.4E-29 206.5 19.5 237 36-300 229-475 (478)
16 3lov_A Protoporphyrinogen oxid 99.9 1.3E-24 4.6E-29 202.8 20.3 263 8-300 171-467 (475)
17 1sez_A Protoporphyrinogen oxid 99.9 7.9E-25 2.7E-29 205.9 17.0 241 37-302 235-497 (504)
18 3nks_A Protoporphyrinogen oxid 99.9 1.2E-23 4.1E-28 196.4 19.8 261 11-297 170-473 (477)
19 3ka7_A Oxidoreductase; structu 99.9 1.8E-22 6.1E-27 185.6 18.4 256 10-295 161-424 (425)
20 4dgk_A Phytoene dehydrogenase; 99.8 6.3E-20 2.2E-24 172.2 16.4 250 34-300 210-493 (501)
21 3nrn_A Uncharacterized protein 99.8 2.4E-19 8.3E-24 164.7 19.7 242 11-294 155-403 (421)
22 1yvv_A Amine oxidase, flavin-c 99.8 7E-18 2.4E-22 150.0 23.1 226 38-302 102-331 (336)
23 2e1m_C L-glutamate oxidase; L- 99.8 9E-20 3.1E-24 147.9 8.4 131 166-300 19-154 (181)
24 4dsg_A UDP-galactopyranose mut 99.8 2.6E-18 8.9E-23 160.6 17.0 262 10-295 162-452 (484)
25 4gde_A UDP-galactopyranose mut 99.8 2E-18 6.8E-23 162.3 15.1 262 11-296 169-477 (513)
26 2b9w_A Putative aminooxidase; 99.7 1.1E-15 3.7E-20 140.4 15.1 223 35-295 196-423 (424)
27 2e1m_B L-glutamate oxidase; L- 99.3 2.2E-13 7.7E-18 103.0 -1.8 108 94-221 4-112 (130)
28 1v0j_A UDP-galactopyranose mut 99.2 8.3E-12 2.8E-16 113.7 4.0 105 10-149 164-275 (399)
29 2bi7_A UDP-galactopyranose mut 98.9 7.8E-09 2.7E-13 93.5 11.7 98 8-145 156-260 (384)
30 1i8t_A UDP-galactopyranose mut 98.8 1.6E-08 5.3E-13 90.9 8.4 104 9-149 153-261 (367)
31 2bcg_G Secretory pathway GDP d 98.7 3.9E-07 1.3E-11 84.1 14.7 68 33-108 229-299 (453)
32 3hdq_A UDP-galactopyranose mut 98.4 9.5E-07 3.2E-11 79.9 10.0 199 8-296 180-389 (397)
33 1vg0_A RAB proteins geranylger 98.4 1.4E-05 4.6E-10 76.3 17.5 95 32-149 364-461 (650)
34 3kkj_A Amine oxidase, flavin-c 98.2 0.00022 7.5E-09 59.6 18.7 91 195-301 240-330 (336)
35 1d5t_A Guanine nucleotide diss 98.1 3.5E-06 1.2E-10 77.3 6.5 69 33-109 221-290 (433)
36 3p1w_A Rabgdi protein; GDI RAB 98.0 7.6E-06 2.6E-10 75.5 7.5 70 32-108 242-313 (475)
37 3ihg_A RDME; flavoenzyme, anth 97.3 0.0031 1.1E-07 59.0 13.5 57 46-108 119-182 (535)
38 2e1m_A L-glutamate oxidase; L- 97.1 0.00031 1.1E-08 62.9 3.8 60 36-105 310-369 (376)
39 3nyc_A D-arginine dehydrogenas 96.8 0.0022 7.4E-08 56.9 6.7 57 46-109 153-209 (381)
40 3dje_A Fructosyl amine: oxygen 96.8 0.0032 1.1E-07 57.3 8.0 58 46-109 160-221 (438)
41 3nix_A Flavoprotein/dehydrogen 96.7 0.081 2.8E-06 47.4 16.3 57 46-108 105-165 (421)
42 3dme_A Conserved exported prot 96.6 0.0051 1.8E-07 54.1 7.6 58 46-109 149-209 (369)
43 3ps9_A TRNA 5-methylaminomethy 96.5 0.0052 1.8E-07 59.3 7.9 58 46-109 416-473 (676)
44 3pvc_A TRNA 5-methylaminomethy 96.4 0.0058 2E-07 59.1 7.3 57 47-109 412-469 (689)
45 2uzz_A N-methyl-L-tryptophan o 96.3 0.009 3.1E-07 52.8 7.4 56 47-109 149-204 (372)
46 3v76_A Flavoprotein; structura 96.3 0.0099 3.4E-07 53.9 7.6 60 43-109 128-187 (417)
47 1y56_B Sarcosine oxidase; dehy 96.1 0.014 4.7E-07 51.9 7.6 56 46-108 148-204 (382)
48 1ryi_A Glycine oxidase; flavop 96.1 0.0096 3.3E-07 52.8 6.4 55 47-108 164-218 (382)
49 2i0z_A NAD(FAD)-utilizing dehy 96.0 0.013 4.5E-07 53.5 7.4 60 44-109 131-191 (447)
50 2gf3_A MSOX, monomeric sarcosi 95.9 0.015 5.1E-07 51.7 7.1 56 47-109 150-205 (389)
51 2ywl_A Thioredoxin reductase r 95.9 0.017 5.7E-07 45.5 6.5 54 47-108 56-109 (180)
52 2oln_A NIKD protein; flavoprot 95.9 0.019 6.4E-07 51.3 7.5 55 47-108 153-207 (397)
53 3nlc_A Uncharacterized protein 95.8 0.02 6.8E-07 53.8 7.6 57 47-109 220-277 (549)
54 2v3a_A Rubredoxin reductase; a 95.7 0.027 9.3E-07 50.2 7.9 55 47-107 187-241 (384)
55 2x3n_A Probable FAD-dependent 95.6 0.022 7.4E-07 51.0 7.0 58 46-109 106-166 (399)
56 3lxd_A FAD-dependent pyridine 95.6 0.03 1E-06 50.4 7.9 55 47-107 194-249 (415)
57 1xdi_A RV3303C-LPDA; reductase 95.5 0.033 1.1E-06 51.6 7.8 55 48-108 224-278 (499)
58 3o0h_A Glutathione reductase; 95.5 0.027 9.3E-07 51.9 7.2 54 48-107 233-286 (484)
59 3iwa_A FAD-dependent pyridine 95.4 0.033 1.1E-06 51.2 7.6 55 47-107 202-256 (472)
60 3fg2_P Putative rubredoxin red 95.4 0.037 1.3E-06 49.7 7.8 55 47-107 184-239 (404)
61 2vou_A 2,6-dihydroxypyridine h 95.3 0.035 1.2E-06 49.6 7.2 56 46-109 98-153 (397)
62 2gqf_A Hypothetical protein HI 95.2 0.032 1.1E-06 50.2 6.6 58 45-109 107-168 (401)
63 1m6i_A Programmed cell death p 95.1 0.052 1.8E-06 50.2 7.9 55 48-108 227-281 (493)
64 2yqu_A 2-oxoglutarate dehydrog 95.0 0.046 1.6E-06 49.9 7.1 56 47-108 208-263 (455)
65 2xdo_A TETX2 protein; tetracyc 95.0 0.042 1.4E-06 49.2 6.6 56 46-109 127-182 (398)
66 2gag_B Heterotetrameric sarcos 94.9 0.052 1.8E-06 48.3 7.1 55 47-108 174-229 (405)
67 3ef6_A Toluene 1,2-dioxygenase 94.9 0.046 1.6E-06 49.2 6.7 55 48-108 186-240 (410)
68 1mo9_A ORF3; nucleotide bindin 94.8 0.052 1.8E-06 50.6 7.0 55 47-107 255-314 (523)
69 2zbw_A Thioredoxin reductase; 94.7 0.072 2.5E-06 46.1 7.3 56 47-108 65-120 (335)
70 4a9w_A Monooxygenase; baeyer-v 94.7 0.061 2.1E-06 46.8 6.8 56 47-109 76-132 (357)
71 3rp8_A Flavoprotein monooxygen 94.7 0.058 2E-06 48.3 6.8 55 46-108 126-180 (407)
72 3axb_A Putative oxidoreductase 94.6 0.057 1.9E-06 49.1 6.6 56 46-108 180-253 (448)
73 2r9z_A Glutathione amide reduc 94.6 0.086 2.9E-06 48.3 7.9 54 48-107 208-262 (463)
74 3oc4_A Oxidoreductase, pyridin 94.6 0.075 2.6E-06 48.5 7.4 55 47-108 189-243 (452)
75 2wpf_A Trypanothione reductase 94.4 0.099 3.4E-06 48.3 7.9 54 48-107 236-290 (495)
76 1ges_A Glutathione reductase; 94.3 0.091 3.1E-06 47.9 7.2 54 48-107 209-263 (450)
77 1pj5_A N,N-dimethylglycine oxi 94.3 0.086 2.9E-06 52.1 7.5 57 46-109 150-207 (830)
78 1fec_A Trypanothione reductase 94.3 0.094 3.2E-06 48.4 7.3 54 48-107 232-286 (490)
79 2qa2_A CABE, polyketide oxygen 94.3 0.087 3E-06 48.8 7.1 58 46-109 106-166 (499)
80 3oz2_A Digeranylgeranylglycero 94.3 0.54 1.8E-05 41.2 12.1 56 47-108 102-161 (397)
81 4dna_A Probable glutathione re 94.2 0.1 3.4E-06 47.8 7.4 54 47-107 211-266 (463)
82 3ab1_A Ferredoxin--NADP reduct 94.2 0.12 4.3E-06 45.2 7.6 56 47-108 74-130 (360)
83 2qa1_A PGAE, polyketide oxygen 94.1 0.09 3.1E-06 48.7 6.9 58 46-109 105-165 (500)
84 2hqm_A GR, grase, glutathione 94.1 0.1 3.4E-06 48.0 7.0 54 48-107 227-283 (479)
85 3c4n_A Uncharacterized protein 94.0 0.04 1.4E-06 49.5 4.1 55 47-108 172-235 (405)
86 1q1r_A Putidaredoxin reductase 93.9 0.12 4.2E-06 46.8 7.3 55 47-107 191-248 (431)
87 1onf_A GR, grase, glutathione 93.8 0.15 5.3E-06 47.1 7.8 55 47-107 217-273 (500)
88 2gv8_A Monooxygenase; FMO, FAD 93.7 0.088 3E-06 47.9 5.9 58 46-109 114-177 (447)
89 3alj_A 2-methyl-3-hydroxypyrid 93.7 0.13 4.6E-06 45.4 7.1 55 46-109 106-160 (379)
90 2qcu_A Aerobic glycerol-3-phos 93.7 0.15 5E-06 47.2 7.5 58 46-109 148-210 (501)
91 4hb9_A Similarities with proba 93.7 0.13 4.5E-06 45.6 7.0 52 48-108 113-165 (412)
92 2cul_A Glucose-inhibited divis 93.7 0.13 4.4E-06 42.3 6.4 55 47-108 68-124 (232)
93 3lzw_A Ferredoxin--NADP reduct 93.6 0.14 4.8E-06 44.0 6.8 56 46-108 66-122 (332)
94 4at0_A 3-ketosteroid-delta4-5a 93.6 0.12 4.1E-06 47.9 6.7 59 44-108 199-263 (510)
95 2cdu_A NADPH oxidase; flavoenz 93.6 0.18 6.3E-06 45.8 7.8 55 47-108 191-246 (452)
96 3d1c_A Flavin-containing putat 93.5 0.14 4.8E-06 44.9 6.8 55 47-108 88-142 (369)
97 3cgv_A Geranylgeranyl reductas 93.4 0.1 3.5E-06 46.2 5.8 58 46-109 101-162 (397)
98 2qae_A Lipoamide, dihydrolipoy 93.4 0.17 5.9E-06 46.2 7.3 55 48-108 216-275 (468)
99 2eq6_A Pyruvate dehydrogenase 93.3 0.18 6.2E-06 46.1 7.4 55 47-107 210-269 (464)
100 2weu_A Tryptophan 5-halogenase 93.3 0.21 7.2E-06 46.1 7.9 57 46-109 172-230 (511)
101 1qo8_A Flavocytochrome C3 fuma 93.3 0.16 5.6E-06 47.7 7.2 57 46-108 249-311 (566)
102 3f8d_A Thioredoxin reductase ( 93.3 0.19 6.6E-06 42.9 7.1 56 46-108 69-124 (323)
103 2q0l_A TRXR, thioredoxin reduc 93.2 0.22 7.6E-06 42.4 7.3 55 46-107 58-112 (311)
104 1y0p_A Fumarate reductase flav 93.1 0.21 7.1E-06 47.0 7.6 56 47-108 255-316 (571)
105 3fmw_A Oxygenase; mithramycin, 93.1 0.077 2.6E-06 50.1 4.6 57 46-108 147-206 (570)
106 3gwf_A Cyclohexanone monooxyge 93.1 0.18 6.3E-06 47.1 7.1 57 46-108 86-146 (540)
107 3lad_A Dihydrolipoamide dehydr 93.1 0.18 6E-06 46.2 6.9 56 47-108 221-279 (476)
108 2e4g_A Tryptophan halogenase; 93.1 0.19 6.5E-06 47.1 7.2 57 46-109 193-252 (550)
109 3ntd_A FAD-dependent pyridine 93.1 0.25 8.4E-06 46.3 8.0 54 48-107 193-265 (565)
110 1k0i_A P-hydroxybenzoate hydro 92.9 0.2 6.9E-06 44.4 6.9 58 46-109 102-163 (394)
111 3atr_A Conserved archaeal prot 92.8 0.24 8.1E-06 45.1 7.4 57 47-109 100-162 (453)
112 4ap3_A Steroid monooxygenase; 92.8 0.23 7.7E-06 46.6 7.2 57 46-108 98-158 (549)
113 1d4d_A Flavocytochrome C fumar 92.8 0.25 8.7E-06 46.5 7.6 57 46-108 254-316 (572)
114 1zmd_A Dihydrolipoyl dehydroge 92.7 0.27 9.1E-06 45.0 7.5 55 48-108 221-281 (474)
115 1fl2_A Alkyl hydroperoxide red 92.7 0.25 8.6E-06 42.0 6.9 57 46-108 55-114 (310)
116 2gqw_A Ferredoxin reductase; f 92.6 0.29 9.8E-06 43.9 7.4 50 48-107 188-237 (408)
117 1ojt_A Surface protein; redox- 92.5 0.15 5.1E-06 46.9 5.6 54 48-107 227-284 (482)
118 3e1t_A Halogenase; flavoprotei 92.5 0.26 9E-06 45.6 7.3 58 46-109 110-172 (512)
119 1zk7_A HGII, reductase, mercur 92.3 0.32 1.1E-05 44.4 7.6 55 47-108 216-270 (467)
120 1ebd_A E3BD, dihydrolipoamide 92.3 0.2 7E-06 45.6 6.2 56 47-108 211-269 (455)
121 3da1_A Glycerol-3-phosphate de 92.3 0.19 6.4E-06 47.3 6.0 58 46-109 169-232 (561)
122 2a8x_A Dihydrolipoyl dehydroge 92.2 0.26 8.9E-06 44.9 6.8 54 48-107 213-269 (464)
123 3fbs_A Oxidoreductase; structu 92.1 0.35 1.2E-05 40.7 7.1 57 46-108 55-111 (297)
124 1trb_A Thioredoxin reductase; 92.1 0.35 1.2E-05 41.3 7.2 55 47-107 184-245 (320)
125 4b1b_A TRXR, thioredoxin reduc 92.0 0.37 1.3E-05 45.1 7.6 56 46-107 262-317 (542)
126 1w4x_A Phenylacetone monooxyge 92.0 0.26 8.8E-06 46.1 6.6 42 67-108 110-153 (542)
127 1vdc_A NTR, NADPH dependent th 92.0 0.27 9.2E-06 42.4 6.3 54 47-108 70-123 (333)
128 1dxl_A Dihydrolipoamide dehydr 91.8 0.28 9.4E-06 44.8 6.4 55 48-108 219-278 (470)
129 3urh_A Dihydrolipoyl dehydroge 91.6 0.33 1.1E-05 44.6 6.7 54 48-107 240-298 (491)
130 1v59_A Dihydrolipoamide dehydr 91.4 0.32 1.1E-05 44.5 6.4 54 48-107 225-285 (478)
131 3ics_A Coenzyme A-disulfide re 91.4 0.4 1.4E-05 45.2 7.2 53 47-107 228-280 (588)
132 3h8l_A NADH oxidase; membrane 91.3 0.28 9.4E-06 43.9 5.8 51 47-107 218-268 (409)
133 1y56_A Hypothetical protein PH 91.0 0.89 3E-05 41.8 9.0 62 36-108 251-312 (493)
134 3vrd_B FCCB subunit, flavocyto 90.9 0.16 5.4E-06 45.3 3.8 42 66-107 215-256 (401)
135 2aqj_A Tryptophan halogenase, 90.9 0.5 1.7E-05 44.0 7.3 56 47-109 165-222 (538)
136 3ic9_A Dihydrolipoamide dehydr 90.7 0.59 2E-05 43.0 7.5 54 47-107 215-272 (492)
137 3itj_A Thioredoxin reductase 1 90.6 0.51 1.8E-05 40.5 6.7 55 46-107 83-140 (338)
138 2rgh_A Alpha-glycerophosphate 90.6 0.44 1.5E-05 44.8 6.6 57 47-109 188-250 (571)
139 2xve_A Flavin-containing monoo 90.5 0.35 1.2E-05 44.2 5.8 57 46-108 100-165 (464)
140 3dgh_A TRXR-1, thioredoxin red 90.4 0.51 1.7E-05 43.3 6.8 54 48-107 228-287 (483)
141 3i3l_A Alkylhalidase CMLS; fla 90.2 0.66 2.3E-05 43.9 7.5 58 46-109 127-188 (591)
142 2a87_A TRXR, TR, thioredoxin r 89.9 0.63 2.2E-05 40.1 6.7 54 47-108 71-125 (335)
143 3uox_A Otemo; baeyer-villiger 89.9 0.47 1.6E-05 44.4 6.1 40 68-107 104-145 (545)
144 3c96_A Flavin-containing monoo 89.8 0.31 1.1E-05 43.5 4.8 57 47-109 107-169 (410)
145 2gmh_A Electron transfer flavo 89.7 0.85 2.9E-05 43.0 7.8 57 46-108 143-216 (584)
146 3dk9_A Grase, GR, glutathione 89.7 0.71 2.4E-05 42.2 7.1 55 47-107 228-291 (478)
147 2bc0_A NADH oxidase; flavoprot 89.6 0.79 2.7E-05 42.1 7.4 52 48-107 237-289 (490)
148 3s5w_A L-ornithine 5-monooxyge 89.3 0.56 1.9E-05 42.5 6.1 55 47-107 127-190 (463)
149 1hyu_A AHPF, alkyl hydroperoxi 89.2 0.74 2.5E-05 42.7 6.9 57 46-108 266-325 (521)
150 1trb_A Thioredoxin reductase; 89.1 0.78 2.7E-05 39.1 6.6 54 47-108 62-115 (320)
151 2zbw_A Thioredoxin reductase; 89.0 1.1 3.7E-05 38.5 7.5 56 47-108 191-251 (335)
152 3klj_A NAD(FAD)-dependent dehy 88.9 0.58 2E-05 41.6 5.8 40 66-107 75-114 (385)
153 1nhp_A NADH peroxidase; oxidor 88.9 0.78 2.7E-05 41.5 6.7 52 48-107 192-244 (447)
154 3s5w_A L-ornithine 5-monooxyge 88.6 0.85 2.9E-05 41.3 6.8 42 67-108 330-376 (463)
155 1rp0_A ARA6, thiazole biosynth 88.5 0.87 3E-05 38.5 6.3 58 46-108 118-190 (284)
156 3itj_A Thioredoxin reductase 1 88.4 0.53 1.8E-05 40.3 5.1 41 67-107 223-269 (338)
157 2bry_A NEDD9 interacting prote 88.4 0.43 1.5E-05 44.0 4.7 58 47-110 166-231 (497)
158 2q7v_A Thioredoxin reductase; 88.3 0.88 3E-05 38.9 6.4 55 47-108 65-122 (325)
159 1lvl_A Dihydrolipoamide dehydr 88.1 0.59 2E-05 42.5 5.4 53 48-108 213-267 (458)
160 3d1c_A Flavin-containing putat 87.9 0.79 2.7E-05 39.9 5.9 51 51-107 218-270 (369)
161 2pyx_A Tryptophan halogenase; 87.8 1.3 4.4E-05 41.1 7.5 57 47-109 175-233 (526)
162 3l8k_A Dihydrolipoyl dehydroge 87.5 1.1 3.7E-05 40.8 6.8 53 47-108 214-271 (466)
163 3cty_A Thioredoxin reductase; 87.4 1.2 4E-05 38.0 6.6 54 47-108 72-125 (319)
164 2zxi_A TRNA uridine 5-carboxym 87.1 1.3 4.3E-05 42.2 7.0 56 47-108 123-179 (637)
165 3cgb_A Pyridine nucleotide-dis 87.1 1.4 4.8E-05 40.3 7.3 53 48-108 228-281 (480)
166 3h28_A Sulfide-quinone reducta 87.0 0.54 1.8E-05 42.4 4.4 55 45-107 198-254 (430)
167 2r0c_A REBC; flavin adenine di 87.0 0.86 2.9E-05 42.6 5.9 55 46-109 137-196 (549)
168 3fpz_A Thiazole biosynthetic e 87.0 0.27 9.3E-06 42.5 2.3 41 260-300 281-326 (326)
169 3ab1_A Ferredoxin--NADP reduct 86.8 0.87 3E-05 39.6 5.5 42 66-107 215-261 (360)
170 2wdq_A Succinate dehydrogenase 86.7 1.4 4.9E-05 41.5 7.3 56 47-108 143-205 (588)
171 2h88_A Succinate dehydrogenase 86.6 1.5 5.1E-05 41.7 7.3 57 47-109 155-217 (621)
172 3f8d_A Thioredoxin reductase ( 86.4 1.1 3.9E-05 37.9 6.0 41 67-107 204-249 (323)
173 4g6h_A Rotenone-insensitive NA 86.3 1.1 3.7E-05 41.4 6.1 55 47-107 272-330 (502)
174 3lzw_A Ferredoxin--NADP reduct 86.1 0.94 3.2E-05 38.6 5.3 42 66-107 202-248 (332)
175 3dgz_A Thioredoxin reductase 2 85.6 1.5 5.3E-05 40.1 6.7 55 47-107 225-285 (488)
176 3r9u_A Thioredoxin reductase; 85.5 1.2 4.2E-05 37.6 5.7 42 66-107 196-242 (315)
177 2dkh_A 3-hydroxybenzoate hydro 85.4 1.3 4.3E-05 42.3 6.2 58 46-109 140-211 (639)
178 3ces_A MNMG, tRNA uridine 5-ca 85.3 1.4 4.9E-05 41.9 6.4 57 47-109 124-181 (651)
179 2bs2_A Quinol-fumarate reducta 85.0 1.7 5.9E-05 41.6 6.9 56 47-108 158-219 (660)
180 1kf6_A Fumarate reductase flav 84.5 1.7 5.9E-05 41.1 6.7 56 47-108 134-196 (602)
181 3fbs_A Oxidoreductase; structu 84.2 1.6 5.4E-05 36.5 5.8 50 48-107 175-224 (297)
182 2q0l_A TRXR, thioredoxin reduc 83.4 2.1 7.1E-05 36.2 6.2 42 66-107 192-239 (311)
183 3cty_A Thioredoxin reductase; 83.4 2 6.7E-05 36.6 6.1 42 66-107 203-250 (319)
184 3hyw_A Sulfide-quinone reducta 83.3 2 7E-05 38.6 6.4 40 66-107 213-254 (430)
185 3cp8_A TRNA uridine 5-carboxym 82.8 2.1 7E-05 40.8 6.3 55 48-108 118-173 (641)
186 3kd9_A Coenzyme A disulfide re 82.2 2.2 7.7E-05 38.4 6.2 52 48-107 191-242 (449)
187 3r9u_A Thioredoxin reductase; 81.8 1.6 5.6E-05 36.8 4.9 53 46-107 61-116 (315)
188 2q7v_A Thioredoxin reductase; 81.6 2.9 9.7E-05 35.6 6.4 41 67-107 202-247 (325)
189 1xhc_A NADH oxidase /nitrite r 81.5 1.7 5.7E-05 38.3 5.0 49 48-107 184-232 (367)
190 4fk1_A Putative thioredoxin re 81.2 3.9 0.00013 34.5 7.1 55 47-107 60-115 (304)
191 4eqs_A Coenzyme A disulfide re 80.7 2 6.8E-05 38.8 5.3 49 49-107 190-238 (437)
192 4gcm_A TRXR, thioredoxin reduc 80.7 1.9 6.5E-05 36.6 5.0 43 257-300 265-307 (312)
193 2e5v_A L-aspartate oxidase; ar 79.5 1.5 5.1E-05 40.1 4.0 55 47-109 119-176 (472)
194 1fl2_A Alkyl hydroperoxide red 79.0 2.2 7.6E-05 36.0 4.8 42 258-300 265-306 (310)
195 4b63_A L-ornithine N5 monooxyg 78.3 2.8 9.4E-05 38.6 5.5 55 47-107 145-212 (501)
196 2cul_A Glucose-inhibited divis 78.1 1.7 6E-05 35.3 3.7 36 261-299 197-232 (232)
197 3k30_A Histamine dehydrogenase 77.9 1.9 6.5E-05 41.5 4.4 49 51-107 571-622 (690)
198 3sx6_A Sulfide-quinone reducta 77.0 2.8 9.5E-05 37.7 5.1 53 47-107 208-267 (437)
199 4a9w_A Monooxygenase; baeyer-v 76.9 2.2 7.7E-05 36.5 4.3 42 258-300 310-353 (357)
200 2gqw_A Ferredoxin reductase; f 76.7 4 0.00014 36.3 6.0 40 66-107 72-111 (408)
201 3ef6_A Toluene 1,2-dioxygenase 76.7 3.7 0.00013 36.6 5.7 41 66-108 70-110 (410)
202 1m6i_A Programmed cell death p 76.2 2.3 7.8E-05 39.1 4.3 40 66-107 103-142 (493)
203 3cgb_A Pyridine nucleotide-dis 76.1 4.2 0.00014 37.1 6.0 41 67-107 107-150 (480)
204 1q1r_A Putidaredoxin reductase 76.0 3.3 0.00011 37.2 5.3 39 67-107 74-112 (431)
205 4fk1_A Putative thioredoxin re 75.1 2.5 8.5E-05 35.8 4.0 43 257-300 259-301 (304)
206 3ntd_A FAD-dependent pyridine 74.8 5.2 0.00018 37.1 6.4 41 67-107 72-115 (565)
207 3hyw_A Sulfide-quinone reducta 74.8 3 0.0001 37.4 4.6 39 67-108 70-108 (430)
208 2vdc_G Glutamate synthase [NAD 74.2 3.7 0.00013 37.3 5.1 43 258-302 405-447 (456)
209 2bc0_A NADH oxidase; flavoprot 73.7 3.3 0.00011 37.9 4.7 41 67-107 106-147 (490)
210 2ywl_A Thioredoxin reductase r 73.7 4.5 0.00015 31.0 4.9 39 261-300 134-172 (180)
211 1vdc_A NTR, NADPH dependent th 73.4 4.3 0.00015 34.5 5.1 41 259-300 284-324 (333)
212 3ics_A Coenzyme A-disulfide re 73.0 7.5 0.00026 36.4 7.1 42 66-107 106-150 (588)
213 1ps9_A 2,4-dienoyl-COA reducta 72.3 5.6 0.00019 38.0 6.1 40 66-108 586-627 (671)
214 1chu_A Protein (L-aspartate ox 72.0 2.5 8.7E-05 39.3 3.5 56 48-108 139-207 (540)
215 3qfa_A Thioredoxin reductase 1 71.1 9 0.00031 35.3 7.0 55 47-107 250-313 (519)
216 2a87_A TRXR, TR, thioredoxin r 69.5 5.9 0.0002 33.9 5.1 42 259-301 277-318 (335)
217 3sx6_A Sulfide-quinone reducta 69.1 3.8 0.00013 36.8 3.9 40 66-108 72-111 (437)
218 4a5l_A Thioredoxin reductase; 69.0 6.4 0.00022 33.0 5.2 54 47-107 66-119 (314)
219 3iwa_A FAD-dependent pyridine 68.6 7.3 0.00025 35.3 5.8 42 66-107 79-123 (472)
220 1nhp_A NADH peroxidase; oxidor 68.2 7.7 0.00026 34.8 5.8 41 67-107 70-113 (447)
221 1ebd_A E3BD, dihydrolipoamide 68.0 9.5 0.00033 34.3 6.4 40 66-108 104-144 (455)
222 3oc4_A Oxidoreductase, pyridin 67.9 4.7 0.00016 36.3 4.3 42 66-107 71-113 (452)
223 1xhc_A NADH oxidase /nitrite r 67.6 5.3 0.00018 35.0 4.4 38 67-107 74-111 (367)
224 1jnr_A Adenylylsulfate reducta 66.7 9.4 0.00032 36.3 6.3 54 49-108 153-217 (643)
225 4a5l_A Thioredoxin reductase; 66.1 15 0.00052 30.7 7.0 41 258-299 272-312 (314)
226 3lxd_A FAD-dependent pyridine 66.0 6.5 0.00022 34.9 4.8 39 67-107 79-117 (415)
227 2x8g_A Thioredoxin glutathione 65.5 17 0.00059 33.9 7.8 55 47-107 326-393 (598)
228 2a8x_A Dihydrolipoyl dehydroge 65.0 10 0.00035 34.2 6.0 40 66-108 104-145 (464)
229 2i0z_A NAD(FAD)-utilizing dehy 64.1 6.3 0.00021 35.5 4.3 40 260-299 402-444 (447)
230 2cdu_A NADPH oxidase; flavoenz 63.6 8.3 0.00028 34.7 5.1 42 66-107 71-115 (452)
231 3h8l_A NADH oxidase; membrane 62.8 14 0.00048 32.6 6.3 43 257-299 293-336 (409)
232 1pn0_A Phenol 2-monooxygenase; 60.5 10 0.00036 36.2 5.3 37 263-299 351-390 (665)
233 1v59_A Dihydrolipoamide dehydr 59.6 11 0.00038 34.1 5.2 37 258-296 313-349 (478)
234 4eqs_A Coenzyme A disulfide re 59.0 21 0.00072 31.9 6.9 42 67-108 71-115 (437)
235 1dxl_A Dihydrolipoamide dehydr 58.7 13 0.00045 33.4 5.5 37 258-296 305-341 (470)
236 1kdg_A CDH, cellobiose dehydro 57.9 16 0.00055 33.7 6.1 42 67-108 210-260 (546)
237 3kd9_A Coenzyme A disulfide re 57.8 11 0.00039 33.7 4.9 40 66-107 72-112 (449)
238 1hyu_A AHPF, alkyl hydroperoxi 57.5 12 0.0004 34.5 5.0 42 258-300 476-517 (521)
239 3fg2_P Putative rubredoxin red 57.5 13 0.00044 32.8 5.1 38 67-107 71-108 (404)
240 1y56_A Hypothetical protein PH 56.5 11 0.00036 34.5 4.5 55 46-107 160-217 (493)
241 3gyx_A Adenylylsulfate reducta 55.8 12 0.00043 35.6 5.0 55 48-108 167-232 (662)
242 3nlc_A Uncharacterized protein 54.9 8.9 0.0003 35.7 3.7 42 258-301 503-545 (549)
243 3h28_A Sulfide-quinone reducta 54.7 14 0.00047 32.9 4.9 44 257-300 280-334 (430)
244 1xdi_A RV3303C-LPDA; reductase 53.7 19 0.00066 32.7 5.8 37 258-296 305-341 (499)
245 1n4w_A CHOD, cholesterol oxida 53.2 13 0.00044 34.1 4.5 42 67-108 236-287 (504)
246 2v3a_A Rubredoxin reductase; a 50.5 24 0.00083 30.7 5.7 39 66-107 73-111 (384)
247 1coy_A Cholesterol oxidase; ox 50.3 17 0.00058 33.3 4.8 43 67-109 241-293 (507)
248 3gwf_A Cyclohexanone monooxyge 49.7 14 0.00049 34.2 4.2 39 67-109 344-384 (540)
249 1o94_A Tmadh, trimethylamine d 49.4 15 0.00052 35.4 4.5 40 66-107 584-644 (729)
250 3uox_A Otemo; baeyer-villiger 49.4 20 0.00068 33.3 5.1 38 67-109 352-391 (545)
251 3jsk_A Cypbp37 protein; octame 48.6 31 0.001 30.0 5.9 40 37-83 152-191 (344)
252 2gqf_A Hypothetical protein HI 47.9 16 0.00054 32.4 4.1 36 260-295 361-399 (401)
253 3l8k_A Dihydrolipoyl dehydroge 47.8 33 0.0011 30.8 6.3 38 257-296 295-332 (466)
254 1ojt_A Surface protein; redox- 47.1 19 0.00065 32.6 4.6 37 258-296 312-348 (482)
255 2jbv_A Choline oxidase; alcoho 46.9 24 0.00083 32.6 5.3 43 66-108 222-272 (546)
256 2qae_A Lipoamide, dihydrolipoy 45.3 26 0.00089 31.5 5.2 38 258-296 302-339 (468)
257 3dgh_A TRXR-1, thioredoxin red 44.8 19 0.00066 32.5 4.2 38 258-296 314-351 (483)
258 3dgz_A Thioredoxin reductase 2 43.4 21 0.00072 32.4 4.3 39 257-296 313-351 (488)
259 1zmd_A Dihydrolipoyl dehydroge 42.8 43 0.0015 30.0 6.3 37 258-296 308-344 (474)
260 3ic9_A Dihydrolipoamide dehydr 42.8 22 0.00075 32.3 4.3 38 257-296 300-337 (492)
261 4dna_A Probable glutathione re 42.7 21 0.00073 32.0 4.2 37 258-296 294-330 (463)
262 3dk9_A Grase, GR, glutathione 41.8 22 0.00076 32.1 4.1 38 258-297 319-356 (478)
263 3vrd_B FCCB subunit, flavocyto 41.8 35 0.0012 29.7 5.4 40 261-300 285-325 (401)
264 2gjc_A Thiazole biosynthetic e 41.5 24 0.00083 30.4 4.1 37 263-299 284-325 (326)
265 3qfa_A Thioredoxin reductase 1 41.3 24 0.00082 32.4 4.3 39 257-296 341-379 (519)
266 1gte_A Dihydropyrimidine dehyd 41.0 28 0.00094 35.1 5.0 40 258-299 469-508 (1025)
267 2gjc_A Thiazole biosynthetic e 40.0 65 0.0022 27.6 6.6 39 37-82 138-176 (326)
268 3lad_A Dihydrolipoamide dehydr 39.3 25 0.00087 31.6 4.1 38 257-296 305-342 (476)
269 1ges_A Glutathione reductase; 39.3 26 0.0009 31.3 4.2 37 258-296 291-327 (450)
270 3klj_A NAD(FAD)-dependent dehy 39.2 20 0.00068 31.5 3.3 40 257-296 252-293 (385)
271 1chu_A Protein (L-aspartate ox 39.1 25 0.00086 32.5 4.1 39 260-298 365-410 (540)
272 3urh_A Dihydrolipoyl dehydroge 38.6 22 0.00075 32.3 3.6 37 258-296 326-362 (491)
273 3v76_A Flavoprotein; structura 38.5 19 0.00064 32.1 3.0 33 261-293 381-416 (417)
274 2hqm_A GR, grase, glutathione 38.1 27 0.00092 31.6 4.1 37 258-296 310-346 (479)
275 3pl8_A Pyranose 2-oxidase; sub 38.1 27 0.00091 33.0 4.1 44 262-305 575-620 (623)
276 3o0h_A Glutathione reductase; 38.1 27 0.00094 31.5 4.1 38 258-297 314-351 (484)
277 2x8g_A Thioredoxin glutathione 37.7 28 0.00097 32.4 4.3 39 258-297 421-459 (598)
278 1ju2_A HydroxynitrIle lyase; f 37.4 46 0.0016 30.6 5.6 43 66-108 207-260 (536)
279 2gag_A Heterotetrameric sarcos 36.7 39 0.0013 33.8 5.3 42 66-107 329-381 (965)
280 1lqt_A FPRA; NADP+ derivative, 35.6 40 0.0014 30.3 4.8 42 67-108 266-325 (456)
281 1fec_A Trypanothione reductase 35.3 32 0.0011 31.2 4.1 37 258-296 314-350 (490)
282 1cjc_A Protein (adrenodoxin re 35.2 30 0.001 31.2 3.8 38 262-300 359-396 (460)
283 2r9z_A Glutathione amide reduc 34.9 33 0.0011 30.8 4.1 36 259-296 291-326 (463)
284 1zk7_A HGII, reductase, mercur 34.8 28 0.00096 31.2 3.6 37 258-296 297-333 (467)
285 2wpf_A Trypanothione reductase 34.7 33 0.0011 31.2 4.1 37 258-296 318-354 (495)
286 1cjc_A Protein (adrenodoxin re 33.9 50 0.0017 29.7 5.1 41 67-107 271-331 (460)
287 1lqt_A FPRA; NADP+ derivative, 33.8 33 0.0011 30.9 3.9 39 261-300 350-388 (456)
288 3g3e_A D-amino-acid oxidase; F 32.7 7.3 0.00025 33.5 -0.7 194 46-300 141-336 (351)
289 4ap3_A Steroid monooxygenase; 32.4 39 0.0013 31.3 4.2 32 73-109 365-396 (549)
290 2eq6_A Pyruvate dehydrogenase 31.6 34 0.0012 30.8 3.6 37 258-296 297-333 (464)
291 2gv8_A Monooxygenase; FMO, FAD 31.0 35 0.0012 30.4 3.6 37 70-108 254-291 (447)
292 1mo9_A ORF3; nucleotide bindin 30.8 36 0.0012 31.2 3.6 37 258-296 341-377 (523)
293 2yqu_A 2-oxoglutarate dehydrog 30.8 43 0.0015 29.9 4.1 37 258-296 290-326 (455)
294 1c0p_A D-amino acid oxidase; a 30.6 18 0.00063 31.0 1.6 45 46-109 141-185 (363)
295 1jnr_A Adenylylsulfate reducta 30.3 56 0.0019 30.9 5.0 40 259-298 428-467 (643)
296 1lvl_A Dihydrolipoamide dehydr 29.8 38 0.0013 30.3 3.6 37 258-296 293-329 (458)
297 1rp0_A ARA6, thiazole biosynth 29.0 23 0.00079 29.4 1.9 38 263-300 234-276 (284)
298 1kf6_A Fumarate reductase flav 28.7 58 0.002 30.5 4.7 40 259-298 369-415 (602)
299 4g6h_A Rotenone-insensitive NA 26.6 57 0.0019 29.7 4.2 41 257-297 358-399 (502)
300 2l8d_A Lamin-B receptor; DNA b 26.5 1E+02 0.0034 19.5 3.9 28 67-94 22-49 (66)
301 4gcm_A TRXR, thioredoxin reduc 26.3 1.5E+02 0.005 24.4 6.6 52 48-107 63-114 (312)
302 1d4d_A Flavocytochrome C fumar 26.2 30 0.001 32.2 2.3 38 260-297 525-568 (572)
303 3atr_A Conserved archaeal prot 26.1 78 0.0027 28.1 5.0 37 263-299 282-321 (453)
304 1qo8_A Flavocytochrome C3 fuma 26.0 43 0.0015 31.0 3.3 39 260-298 519-563 (566)
305 3gyx_A Adenylylsulfate reducta 25.6 67 0.0023 30.6 4.6 43 258-300 448-490 (662)
306 2xve_A Flavin-containing monoo 25.6 73 0.0025 28.5 4.7 35 70-108 241-275 (464)
307 3q9t_A Choline dehydrogenase a 24.4 83 0.0028 29.3 4.9 38 261-298 534-573 (577)
308 3qvp_A Glucose oxidase; oxidor 24.3 87 0.003 29.2 5.0 39 261-299 540-580 (583)
309 3k30_A Histamine dehydrogenase 24.3 24 0.00082 33.7 1.2 37 261-300 640-676 (690)
310 2bs2_A Quinol-fumarate reducta 24.0 79 0.0027 30.0 4.8 40 260-299 383-429 (660)
311 3t37_A Probable dehydrogenase; 23.9 84 0.0029 28.4 4.9 42 67-108 225-270 (526)
312 4da9_A Short-chain dehydrogena 23.3 57 0.002 26.9 3.3 49 9-59 3-51 (280)
313 3jsk_A Cypbp37 protein; octame 23.2 69 0.0024 27.7 3.8 38 263-300 294-336 (344)
314 2wdq_A Succinate dehydrogenase 23.1 46 0.0016 31.1 2.9 39 261-299 379-424 (588)
315 2dig_A Lamin-B receptor; tudor 22.6 1.2E+02 0.004 19.2 3.7 28 67-94 25-52 (68)
316 1gte_A Dihydropyrimidine dehyd 22.5 1.6E+02 0.0054 29.6 6.8 42 66-107 383-440 (1025)
317 1y0p_A Fumarate reductase flav 22.1 49 0.0017 30.7 2.8 39 260-298 524-568 (571)
318 2gmh_A Electron transfer flavo 22.0 89 0.003 29.1 4.6 37 263-299 347-386 (584)
319 1onf_A GR, grase, glutathione 21.4 70 0.0024 28.9 3.8 39 258-296 300-370 (500)
320 3c4a_A Probable tryptophan hyd 20.9 28 0.00095 30.2 0.9 48 47-112 98-145 (381)
321 1gpe_A Protein (glucose oxidas 20.2 85 0.0029 29.3 4.1 41 261-301 544-586 (587)
No 1
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=100.00 E-value=1.4e-39 Score=304.33 Aligned_cols=298 Identities=57% Similarity=1.070 Sum_probs=243.0
Q ss_pred eecccccccCcccccccccCCccccccccCCCceeeeCCCCHHHHHHHHHHhhhccC--CCCCCCCeeecCCeeEEEEec
Q 021822 5 YFYNDFEEAEPTRISSLKNTFPRQLMEDFGEDSYFVADPRGFETVVHYIANQFLSHN--NNKITDPRLKLKKTVRKINQS 82 (307)
Q Consensus 5 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~~~~~~--~~~~~g~~i~l~~~V~~I~~~ 82 (307)
.+...++++.+++.+|+..+.+...+..+++..+++..+|||++|+++|++.+.+.. .|..+|++|+++++|++|+.+
T Consensus 164 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~ 243 (472)
T 1b37_A 164 YYKFDYEFAEPPRVTSLQNTVPLATFSDFGDDVYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYS 243 (472)
T ss_dssp HHHTHHHHSSCGGGBBSTTTSSCHHHHHHCSEEEEECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEEC
T ss_pred HHHHhhhhcccccccchhhccccccccccCCceeeeecCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEc
Confidence 344456678889999987776433344556667887768999999999999985410 111136789999999999999
Q ss_pred CCeEEEEeCCCcEEEcCEEEEecChhhhccCcccccCCCCHHHHHHHhhcCCCcceEEEEEcCCCCcCCCCCcceEEeec
Q 021822 83 KNKVIITTEDGSVYHANYVIVTVSVGVLQSDLIGFVPRLPLWKKLAINNFDMAIYTKIFMKFPYKFWPTGPGTEFLLYAH 162 (307)
Q Consensus 83 ~~~v~V~~~~G~~~~ad~VI~a~P~~~l~~~~i~~~p~l~~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~ 162 (307)
++++.|++.+|+++.||+||+|+|+..++++++.|.|+||+.+.++++++.+++..||++.|+++||+.+.+..++++.+
T Consensus 244 ~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~ 323 (472)
T 1b37_A 244 PGGVTVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEGKGREFFLYAS 323 (472)
T ss_dssp SSCEEEEETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCCSCCSTTCSEEEECC
T ss_pred CCcEEEEECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcCCCCCCCcceEEecc
Confidence 88999999999889999999999999998866678899999999999999999999999999999998744444555555
Q ss_pred CCCCceeeeeeccccCCCCceEEEEecchhhHHHhhCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEecccCcCCCCCCc
Q 021822 163 ETRGYFTIWQHLENELPGENMIFVTVTDEESRRIEQQSEKKTKAEIMQVLKKMFGNGKQIPEPDTMLIPKWWSNRLYKGS 242 (307)
Q Consensus 163 ~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~a~~~~~~~~e~~~~~~~~~L~~~~p~g~~~~~~~~~~~~~W~~~~~~~g~ 242 (307)
.+.+...+|..++...++.++|++++.+..+..|..++++++.+.++++|++++| +.+++++.+...++|..+||+.|+
T Consensus 324 ~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~a~~~~~~~~~e~~~~~l~~L~~~~P-g~~~~~~~~~~~~~W~~~~~~~G~ 402 (472)
T 1b37_A 324 SRRGYYGVWQEFEKQYPDANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFP-GKDVPDATDILVPRWWSDRFYKGT 402 (472)
T ss_dssp SSTTSSCEEEECTTTSTTCCEEEEEEEHHHHHHHHTSCHHHHHHHHHHHHHHHCT-TSCCCCCSEEECCCTTTCTTTSSS
T ss_pred cCCccceeeecccCCCCCCCEEEEEechHHHHHHHhCCHHHHHHHHHHHHHHHcC-CCCCCCCceEEecccCCCCCCCcc
Confidence 4444455665444334566788877776667778889999999999999999999 876678888888999999999999
Q ss_pred CCCCCCCCChhhhhHhhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHhh-hhh
Q 021822 243 YSNWPNGYTLHSYHDLQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLKH-FCE 303 (307)
Q Consensus 243 y~~~~~g~~~~~~~~~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~~-~~~ 303 (307)
|+...||+.....+.+++|.++|||||+++++.++|+|+||+.||++||++|++.++. .|.
T Consensus 403 ~~~~~~g~~~~~~~~l~~p~~~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~~l~~~~~~ 464 (472)
T 1b37_A 403 FSNWPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQKKMCK 464 (472)
T ss_dssp EEECBTTCCHHHHHHHHCCBTTEEECSGGGCTTTTTSHHHHHHHHHHHHHHHHHHHHHCCC-
T ss_pred cCCCCCCCChhHHHHHhccCCcEEEeecccCCCCCCchhHHHHHHHHHHHHHHHHHHhCcCC
Confidence 9877889875557788999999999999999877899999999999999999999887 663
No 2
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=100.00 E-value=9.9e-37 Score=295.38 Aligned_cols=273 Identities=26% Similarity=0.487 Sum_probs=218.3
Q ss_pred ecccccc--cCcccccccccCCccccccccCCCceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecC
Q 021822 6 FYNDFEE--AEPTRISSLKNTFPRQLMEDFGEDSYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSK 83 (307)
Q Consensus 6 ~~~~~~~--~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~ 83 (307)
|++..++ +.+.+.+|+..+.....+ .+.+..+.+ +|||++|+++|++.+ +|++|++|++|+.++
T Consensus 361 ~~~~~~~~~~~~l~~ls~~~~~~~~~~-~~~g~~~~~--~gG~~~l~~~La~~l-----------~I~l~~~V~~I~~~~ 426 (662)
T 2z3y_A 361 HFANLEFANATPLSTLSLKHWDQDDDF-EFTGSHLTV--RNGYSCVPVALAEGL-----------DIKLNTAVRQVRYTA 426 (662)
T ss_dssp HHHHHHHHTTSCGGGBBTTTTTTTGGG-CCBSCCEEE--TTCTTHHHHHHTTTC-----------EEETTEEEEEEEEET
T ss_pred HHHHHHHhcCCChhhcCHhhcCCCccc-ccCCceeee--cCcHHHHHHHHHhcC-----------ceecCCeEEEEEECC
Confidence 3333444 777888898876422122 344555555 899999999999875 599999999999999
Q ss_pred CeEEEEeCC------CcEEEcCEEEEecChhhhccC--cccccCCCCHHHHHHHhhcCCCcceEEEEEcCCCCcCCCCCc
Q 021822 84 NKVIITTED------GSVYHANYVIVTVSVGVLQSD--LIGFVPRLPLWKKLAINNFDMAIYTKIFMKFPYKFWPTGPGT 155 (307)
Q Consensus 84 ~~v~V~~~~------G~~~~ad~VI~a~P~~~l~~~--~i~~~p~l~~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~ 155 (307)
+++.|++.+ |+++.||+||+|+|+.+|+++ .+.|.|+||+.+.++++++.|+++.||++.|+++||+++.
T Consensus 427 ~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~i~f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~~~-- 504 (662)
T 2z3y_A 427 SGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSV-- 504 (662)
T ss_dssp TEEEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTC--
T ss_pred CcEEEEEeecccCCCCeEEEeCEEEECCCHHHHhcccCceEEcCCCCHHHHHHHHhCCccceeEEEEEcCcccccCCC--
Confidence 999988765 567999999999999999872 3679999999999999999999999999999999998632
Q ss_pred ceEEee-c--CCCC-ceeeeeeccccCCCCceEEEEecchhhHHHhhCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEec
Q 021822 156 EFLLYA-H--ETRG-YFTIWQHLENELPGENMIFVTVTDEESRRIEQQSEKKTKAEIMQVLKKMFGNGKQIPEPDTMLIP 231 (307)
Q Consensus 156 ~~~~~~-~--~~~~-~~~~~~~~~~~~~g~~~l~~~~~~~~a~~~~~~~~e~~~~~~~~~L~~~~p~g~~~~~~~~~~~~ 231 (307)
.++... + +..+ ...+|.. .+.++|++|+.|..+..+..++++++.+.++++|+++|+ ....++|..+.++
T Consensus 505 ~~~G~l~~~~~~~~~~~~~~~~-----~~~~vL~~~~~G~~a~~~~~lsdee~~~~~l~~L~~~~g-~~~~~~p~~~~v~ 578 (662)
T 2z3y_A 505 NLFGHVGSTTASRGELFLFWNL-----YKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFG-SSAVPQPKETVVS 578 (662)
T ss_dssp SEEEECCSSSTTTTEEEEEECC-----SSSSEEEEEECTHHHHHHTTSCHHHHHHHHHHHHHHHHC-TTSSCCCSEEEEC
T ss_pred CceeeecCCCCCCCceeEEEeC-----CCCCEEEEEeccHhHHHHHhCCHHHHHHHHHHHHHHHhC-CcccCCCceeEEE
Confidence 222221 1 1222 2222221 145688889999889889899999999999999999996 4345678899999
Q ss_pred ccCcCCCCCCcCCCCCCCCChhhhhHhhCCC-------------CcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHH
Q 021822 232 KWWSNRLYKGSYSNWPNGYTLHSYHDLQQPF-------------GRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCL 298 (307)
Q Consensus 232 ~W~~~~~~~g~y~~~~~g~~~~~~~~~~~p~-------------~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l 298 (307)
+|.++||+.|+|+++.||.....++.+..|. ++|||||++++..++|||+||+.||+|||++|++.+
T Consensus 579 ~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~~~~~~~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~~ 658 (662)
T 2z3y_A 579 RWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQF 658 (662)
T ss_dssp CTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC---------CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCcccccCCCCCchhhHHHHhCcCccccccccccCCCCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999889998766666776664 689999999998788999999999999999999987
Q ss_pred hh
Q 021822 299 KH 300 (307)
Q Consensus 299 ~~ 300 (307)
.+
T Consensus 659 ~g 660 (662)
T 2z3y_A 659 LG 660 (662)
T ss_dssp TC
T ss_pred cC
Confidence 65
No 3
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=100.00 E-value=5.8e-36 Score=294.31 Aligned_cols=266 Identities=26% Similarity=0.493 Sum_probs=215.2
Q ss_pred cCcccccccccCCccccccccCCCceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCC
Q 021822 13 AEPTRISSLKNTFPRQLMEDFGEDSYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTED 92 (307)
Q Consensus 13 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~ 92 (307)
+.+.+.+|+..+.....+ .+.+..+.+ +|||++|+++|++.+ +|++|++|++|+.++++|.|++.+
T Consensus 541 ~~~l~~lSl~~~~~~~~~-~~~g~~~~~--~gG~~~L~~aLa~~l-----------~I~Lnt~V~~I~~~~~gV~V~~~~ 606 (852)
T 2xag_A 541 ATPLSTLSLKHWDQDDDF-EFTGSHLTV--RNGYSCVPVALAEGL-----------DIKLNTAVRQVRYTASGCEVIAVN 606 (852)
T ss_dssp TSCTTTBBTTTTTGGGGG-CCBSCCEEE--TTCTTHHHHHHTTTC-----------CEECSEEEEEEEEETTEEEEEEEE
T ss_pred cCChHhhhhhhhhhcccc-ccCCceEEe--cCcHHHHHHHHHhCC-----------CEEeCCeEEEEEEcCCcEEEEEee
Confidence 667788888876432122 344555555 899999999999875 599999999999999999888765
Q ss_pred ------CcEEEcCEEEEecChhhhccC--cccccCCCCHHHHHHHhhcCCCcceEEEEEcCCCCcCCCCCcceEEee-c-
Q 021822 93 ------GSVYHANYVIVTVSVGVLQSD--LIGFVPRLPLWKKLAINNFDMAIYTKIFMKFPYKFWPTGPGTEFLLYA-H- 162 (307)
Q Consensus 93 ------G~~~~ad~VI~a~P~~~l~~~--~i~~~p~l~~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~-~- 162 (307)
|+++.||+||+|+|+.+|+++ .|.|.|+||..+.++++++.|+++.||+|.|+++||..+. .++.+. +
T Consensus 607 ~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~I~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~~~--~~fG~l~~~ 684 (852)
T 2xag_A 607 TRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSV--NLFGHVGST 684 (852)
T ss_dssp SSSTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTC--CEEEECCSS
T ss_pred cccCCCCeEEECCEEEECCCHHHHHhhhcccccCCCCCHHHHHHHHcCCccceEEEEEEcCCcccCCCC--Ceeeeeccc
Confidence 567999999999999999872 3679999999999999999999999999999999998632 222221 1
Q ss_pred -CCCC-ceeeeeeccccCCCCceEEEEecchhhHHHhhCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEecccCcCCCCC
Q 021822 163 -ETRG-YFTIWQHLENELPGENMIFVTVTDEESRRIEQQSEKKTKAEIMQVLKKMFGNGKQIPEPDTMLIPKWWSNRLYK 240 (307)
Q Consensus 163 -~~~~-~~~~~~~~~~~~~g~~~l~~~~~~~~a~~~~~~~~e~~~~~~~~~L~~~~p~g~~~~~~~~~~~~~W~~~~~~~ 240 (307)
...+ +..+|... +.++|++|+.|..+..+..++++++.+.++++|+++|+ ....++|..+.+++|.++||+.
T Consensus 685 ~~~~~~l~~~~~~~-----~~pvLl~~v~G~~a~~l~~lsdeel~~~~l~~L~~ifG-~~~~~~P~~~~vtrW~~dp~s~ 758 (852)
T 2xag_A 685 TASRGELFLFWNLY-----KAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFG-SSAVPQPKETVVSRWRADPWAR 758 (852)
T ss_dssp STTTTTTCEEEECS-----SSSEEEEEECHHHHHHGGGSCHHHHHHHHHHHHHHHHC-TTTCCCCSEEEECCTTTCTTTS
T ss_pred cCCCCceEEEecCC-----CCCEEEEEecCcCHHHHhcCCHHHHHHHHHHHHHHHhC-ccccCCceEEEEEecCCCCCcC
Confidence 1222 22333321 44688889988888888899999999999999999995 4334678899999999999999
Q ss_pred CcCCCCCCCCChhhhhHhhCCC-------------CcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHhh
Q 021822 241 GSYSNWPNGYTLHSYHDLQQPF-------------GRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLKH 300 (307)
Q Consensus 241 g~y~~~~~g~~~~~~~~~~~p~-------------~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~~ 300 (307)
|+|+++.||.....+..+..|. ++|||||++++..|+|||+||+.||+|||++|++.+.+
T Consensus 759 GsYs~~~pG~~~~~~~~L~~P~~~~~~~p~~~~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~l~~ 831 (852)
T 2xag_A 759 GSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLG 831 (852)
T ss_dssp SSCEECBTTCCTTHHHHTTSCBCCCCSSTTCCCCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccccccCCCcchhhHHHHhCccccccccccccCCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHHhhC
Confidence 9999889998766666676654 68999999999878899999999999999999999876
No 4
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=100.00 E-value=3.2e-34 Score=280.23 Aligned_cols=271 Identities=26% Similarity=0.498 Sum_probs=223.0
Q ss_pred ccccCcccccccccCCccccccccCCCceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEE
Q 021822 10 FEEAEPTRISSLKNTFPRQLMEDFGEDSYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIIT 89 (307)
Q Consensus 10 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~ 89 (307)
+..|+.++.+|+..+.....+..+++...++ ++|++.|+++|++.+ +|+++++|++|+.++++|.|+
T Consensus 499 ~~~G~~l~~ls~~~~~~~~~~~~~~G~~~~~--~~G~~~l~~aLa~gl-----------~I~l~t~V~~I~~~~~~v~V~ 565 (776)
T 4gut_A 499 YACGSNLHQVSARSWDHNEFFAQFAGDHTLL--TPGYSVIIEKLAEGL-----------DIQLKSPVQCIDYSGDEVQVT 565 (776)
T ss_dssp HHHTSCTTSBBTTTTTGGGGSCCCCSCEEEC--TTCTHHHHHHHHTTS-----------CEESSCCEEEEECSSSSEEEE
T ss_pred HhcCCChHHcChhhhhhhhhHHhcCCCeEEE--CChHHHHHHHHHhCC-----------cEEcCCeeEEEEEcCCEEEEE
Confidence 4567888889988775443455667766666 799999999999765 599999999999998899999
Q ss_pred eCCCcEEEcCEEEEecChhhhccCcccccCCCCHHHHHHHhhcCCCcceEEEEEcCCCCcCCC-CCcceEEeec---CCC
Q 021822 90 TEDGSVYHANYVIVTVSVGVLQSDLIGFVPRLPLWKKLAINNFDMAIYTKIFMKFPYKFWPTG-PGTEFLLYAH---ETR 165 (307)
Q Consensus 90 ~~~G~~~~ad~VI~a~P~~~l~~~~i~~~p~l~~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~-~~~~~~~~~~---~~~ 165 (307)
+.+|+++.||+||+|+|+.+|++..+.|.|+||+.+..+++++.++++.||++.|+++||.+. .+..++.+.. ++.
T Consensus 566 ~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~g~~~KV~l~f~~~FW~~~~~g~~~fG~l~~~~~~~ 645 (776)
T 4gut_A 566 TTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKR 645 (776)
T ss_dssp ETTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHEEEECCEEEEEECSSCTTHHHHTTCSEEEECCSSGGGT
T ss_pred ECCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhCCCeeEEEEEEecCcccccccCCCCceEEeecCCcCCC
Confidence 999988999999999999999865678999999999999999999999999999999999862 2233443322 222
Q ss_pred CceeeeeeccccCCC-CceEEEEecchhhHHHhhCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEecccCcCCCCCCcCC
Q 021822 166 GYFTIWQHLENELPG-ENMIFVTVTDEESRRIEQQSEKKTKAEIMQVLKKMFGNGKQIPEPDTMLIPKWWSNRLYKGSYS 244 (307)
Q Consensus 166 ~~~~~~~~~~~~~~g-~~~l~~~~~~~~a~~~~~~~~e~~~~~~~~~L~~~~p~g~~~~~~~~~~~~~W~~~~~~~g~y~ 244 (307)
+...++.+ ..+.+ ..+|++++.|..+..+..++++++.+.++++|+++|+ ....++|..+..++|..+||+.|+|+
T Consensus 646 ~~~~~~~d--~~p~g~~~vL~~~i~G~~a~~l~~lsdeel~~~~l~~L~~ifg-~~~~~~P~~~~vt~W~~dp~s~Gsys 722 (776)
T 4gut_A 646 GLFAVFYD--MDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFK-EQEVPDPTKYFVTRWSTDPWIQMAYS 722 (776)
T ss_dssp TEEEEEEE--SCTTSCSCEEEEEECTHHHHHHHTSCHHHHHHHHHHHHHHHTT-TSCCCCCSEEEECCGGGCTTTCCSEE
T ss_pred ceEEEEec--CCCCCCceEEEEEecchhHHHHHcCCHHHHHHHHHHHHHHHhC-cccccCcceEEEecCCCCCccCCCCC
Confidence 33333322 22333 4688889998888889999999999999999999996 44567888999999999999999999
Q ss_pred CCCCCCChhhhhHhhCCC-CcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 245 NWPNGYTLHSYHDLQQPF-GRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 245 ~~~~g~~~~~~~~~~~p~-~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
...||.....++.+..|. ++|||||++++..++|+|+||++||.|||++|++
T Consensus 723 ~~~~g~~~~~~~~L~~p~~grL~FAGE~Ts~~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 723 FVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp EEBTTCCTHHHHHHHCCBTTTEEECSGGGCSSSCSSHHHHHHHHHHHHHHHHC
T ss_pred ccCCCCchhHHHHHhCcCCCcEEEEehhhcCCCCcCHHHHHHHHHHHHHHHHh
Confidence 877887655677888885 8999999999988899999999999999999974
No 5
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=7.7e-34 Score=268.46 Aligned_cols=275 Identities=21% Similarity=0.318 Sum_probs=217.1
Q ss_pred cccccCcccccccccCCccccc--------c-ccCCCceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEE
Q 021822 9 DFEEAEPTRISSLKNTFPRQLM--------E-DFGEDSYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKI 79 (307)
Q Consensus 9 ~~~~~~~~~~~s~~~~~~~~~~--------~-~~~~~~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I 79 (307)
...++.+++++|+..+...... . ..++..+++ +|||++|+++|++.+ |++|++|++|++|
T Consensus 170 ~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~gG~~~l~~~l~~~l---------g~~i~~~~~V~~i 238 (520)
T 1s3e_A 170 NLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKF--VGGSGQVSERIMDLL---------GDRVKLERPVIYI 238 (520)
T ss_dssp HHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEE--TTCTHHHHHHHHHHH---------GGGEESSCCEEEE
T ss_pred hhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEE--eCCHHHHHHHHHHHc---------CCcEEcCCeeEEE
Confidence 3457889999998876422110 0 011223444 899999999999986 6789999999999
Q ss_pred EecCCeEEEEeCCCcEEEcCEEEEecChhhhccCcccccCCCCHHHHHHHhhcCCCcceEEEEEcCCCCcCCCCCcceEE
Q 021822 80 NQSKNKVIITTEDGSVYHANYVIVTVSVGVLQSDLIGFVPRLPLWKKLAINNFDMAIYTKIFMKFPYKFWPTGPGTEFLL 159 (307)
Q Consensus 80 ~~~~~~v~V~~~~G~~~~ad~VI~a~P~~~l~~~~i~~~p~l~~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~ 159 (307)
+.+++++.|.+.+|+++.||+||+|+|+..+.+ +.+.|+||+.+.++++++.+++..|+++.|+++||++. +.....
T Consensus 239 ~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~--l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~-~~~g~~ 315 (520)
T 1s3e_A 239 DQTRENVLVETLNHEMYEAKYVISAIPPTLGMK--IHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKK-DYCGTM 315 (520)
T ss_dssp ECSSSSEEEEETTSCEEEESEEEECSCGGGGGG--SEEESCCCHHHHHHTTSCCBCCEEEEEEECSSCGGGGG-TEEEEE
T ss_pred EECCCeEEEEECCCeEEEeCEEEECCCHHHHcc--eeeCCCCCHHHHHHHHhCCCcceEEEEEEeCCCcccCC-CCCcee
Confidence 998888999999998999999999999999987 55789999999999999999999999999999999752 111111
Q ss_pred e-ecCCCCceeeeeeccccCCC-CceEEEEecchhhHHHhhCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEecccCcCC
Q 021822 160 Y-AHETRGYFTIWQHLENELPG-ENMIFVTVTDEESRRIEQQSEKKTKAEIMQVLKKMFGNGKQIPEPDTMLIPKWWSNR 237 (307)
Q Consensus 160 ~-~~~~~~~~~~~~~~~~~~~g-~~~l~~~~~~~~a~~~~~~~~e~~~~~~~~~L~~~~p~g~~~~~~~~~~~~~W~~~~ 237 (307)
+ .+.+.+...+|+. ..+++ .++|++++.+..+..|.+++++++.+.++++|++++| .....+|.++..++|.+++
T Consensus 316 ~~~~~~~~~~~~~d~--~~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~~~~~-~~~~~~p~~~~~~~W~~~~ 392 (520)
T 1s3e_A 316 IIDGEEAPVAYTLDD--TKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLG-SLEALEPVHYEEKNWCEEQ 392 (520)
T ss_dssp EECSTTCSCSEEEEC--CCTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHHHHHT-CGGGGCCSEEEEEEGGGCT
T ss_pred eccCCCCceEEEeeC--CCCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHHHHhC-ccccCCccEEEEEeeCCCC
Confidence 2 1222233333332 12333 4788888888778889899999999999999999996 4324578888999999999
Q ss_pred CCCCcCC-CCCCCCChhhhhHhhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHhh
Q 021822 238 LYKGSYS-NWPNGYTLHSYHDLQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLKH 300 (307)
Q Consensus 238 ~~~g~y~-~~~~g~~~~~~~~~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~~ 300 (307)
|+.|+|. ...||......+.+.+|.++|||||++++..++|+|+||+.||++||++|++.++.
T Consensus 393 ~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~t~~~~~g~v~GAi~SG~~aA~~i~~~l~~ 456 (520)
T 1s3e_A 393 YSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREILHAMGK 456 (520)
T ss_dssp TTCSSSCBCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCCCCCccccCCCccccchHHHhCCCCCEEEeehhhcCcCcEEhHHHHHHHHHHHHHHHHHHhc
Confidence 9999997 67788755445578889999999999998777899999999999999999999865
No 6
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=100.00 E-value=1.8e-32 Score=258.92 Aligned_cols=272 Identities=24% Similarity=0.357 Sum_probs=202.2
Q ss_pred ccCcccccccccCCccccccccCCCceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEec-CCeEEEEe
Q 021822 12 EAEPTRISSLKNTFPRQLMEDFGEDSYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQS-KNKVIITT 90 (307)
Q Consensus 12 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~-~~~v~V~~ 90 (307)
+|.+++.+|...+.. .+.+..+++ +| +++|+++|++.++ +++|++|++|++|... ++++.|++
T Consensus 175 ~g~~~~~~s~~~~~~-----~~~~~~~~~--~g-~~~l~~~l~~~l~--------~~~i~~~~~V~~I~~~~~~~v~v~~ 238 (516)
T 1rsg_A 175 HGLDWKLLSAKDTYF-----GHQGRNAFA--LN-YDSVVQRIAQSFP--------QNWLKLSCEVKSITREPSKNVTVNC 238 (516)
T ss_dssp HTBCTTTSBHHHHCC-----CCSSCCEEE--SC-HHHHHHHHHTTSC--------GGGEETTCCEEEEEECTTSCEEEEE
T ss_pred hCCChHHCChHHHHh-----hccCcchhh--hC-HHHHHHHHHHhCC--------CCEEEECCEEEEEEEcCCCeEEEEE
Confidence 577788888776532 133455665 67 9999999999984 4679999999999986 56799999
Q ss_pred CCCcEEEcCEEEEecChhhhccC---------cccccCCCCHHHHHHHhhcCCCcceEEEEEcCCCCcCCCCCcceEEee
Q 021822 91 EDGSVYHANYVIVTVSVGVLQSD---------LIGFVPRLPLWKKLAINNFDMAIYTKIFMKFPYKFWPTGPGTEFLLYA 161 (307)
Q Consensus 91 ~~G~~~~ad~VI~a~P~~~l~~~---------~i~~~p~l~~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~ 161 (307)
.+|+++.||+||+|+|+.+|+.. .+.|.|+||+.+.++++++.|++..||++.|+++||+++. ..+....
T Consensus 239 ~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~~-~~~~~~~ 317 (516)
T 1rsg_A 239 EDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWSNES-SKIVTLA 317 (516)
T ss_dssp TTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSSCCCCCEEEEEEESSCCSCCSC-SEEEECC
T ss_pred CCCcEEECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhCCCCcceEEEEEeCCCCCCCCC-CcEEEeC
Confidence 99988999999999999999642 2678999999999999999999999999999999998632 2232222
Q ss_pred cCCCC--------------------------------ceeee-eeccccCCCCceEEEEecchhhHHHhhC--CHHHHHH
Q 021822 162 HETRG--------------------------------YFTIW-QHLENELPGENMIFVTVTDEESRRIEQQ--SEKKTKA 206 (307)
Q Consensus 162 ~~~~~--------------------------------~~~~~-~~~~~~~~g~~~l~~~~~~~~a~~~~~~--~~e~~~~ 206 (307)
+.+.+ .++.+ ..+ ....+.++|++|+.++.+..+..+ +++++.+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~L~~~~~g~~a~~~~~l~~~~~~~~~ 396 (516)
T 1rsg_A 318 NSTNEFVEIVRNAENLDELDSMLEREDSQKHTSVTCWSQPLFFVNL-SKSTGVASFMMLMQAPLTNHIESIREDKERLFS 396 (516)
T ss_dssp CCCHHHHHHHHHCCSHHHHHHHC---------CCCTTSSCEEEEEH-HHHTSCSEEEEEECBTHHHHHHHTTTCHHHHHH
T ss_pred CCCccchhhcccCcccchhhhcccccccccccccccccCceeEEEe-eecCCCcEEEEEecchHHHHHHhcCCCHHHHHH
Confidence 11000 00100 001 012356788899999888888888 8888765
Q ss_pred H---HHHHHHHHhCC-----CCCCC-------CCc--eEEecccCcCCCCCCcCCCCCCCCCh-hhhhHhh-CCCCcEEE
Q 021822 207 E---IMQVLKKMFGN-----GKQIP-------EPD--TMLIPKWWSNRLYKGSYSNWPNGYTL-HSYHDLQ-QPFGRIYF 267 (307)
Q Consensus 207 ~---~~~~L~~~~p~-----g~~~~-------~~~--~~~~~~W~~~~~~~g~y~~~~~g~~~-~~~~~~~-~p~~~l~~ 267 (307)
. ++++|.++|+. +...+ .|. .+..++|..+||+.|+|+.+.||... .....+. .|.++|||
T Consensus 397 ~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~~~W~~dp~~~Gsys~~~~g~~~~~~~~~l~~~~~~rl~F 476 (516)
T 1rsg_A 397 FFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIVSNWTRDPYSRGAYSACFPGDDPVDMVVAMSNGQDSRIRF 476 (516)
T ss_dssp HHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEEEECCTTTCTTTTTCCCCCBC----CHHHHHHHHCSSSSEEE
T ss_pred HHHHHHHHHHhhccccccccCCCCcccccccCCCccceEEEecCCCCCCCCccCCCcCCCCCHHHHHHHhccCCCCcEEE
Confidence 4 66666666520 11111 144 78889999999999999988898743 2344554 46789999
Q ss_pred ecccccCCCCcchhHHHHHHHHHHHHHHHHHhhh
Q 021822 268 AGEHTNSTYLGYVDGAYFSGINTANALIKCLKHF 301 (307)
Q Consensus 268 aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~~~ 301 (307)
||++++..++|||+||++||.|||++|++.++.+
T Consensus 477 AGe~ts~~~~g~v~GA~~SG~raA~~i~~~~~~~ 510 (516)
T 1rsg_A 477 AGEHTIMDGAGCAYGAWESGRREATRISDLLKLE 510 (516)
T ss_dssp CSTTSCSTTBTSHHHHHHHHHHHHHHHHHHHHGG
T ss_pred eccccccCCCccchhHHHHHHHHHHHHHHHhhhh
Confidence 9999998889999999999999999999988764
No 7
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=100.00 E-value=7.5e-33 Score=257.19 Aligned_cols=268 Identities=19% Similarity=0.238 Sum_probs=210.1
Q ss_pred ccccCccc-ccccccCCccccccccC----------CCceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEE
Q 021822 10 FEEAEPTR-ISSLKNTFPRQLMEDFG----------EDSYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRK 78 (307)
Q Consensus 10 ~~~~~~~~-~~s~~~~~~~~~~~~~~----------~~~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~ 78 (307)
..++.+++ ++|+..+.... ..++ ...+++ +|||++|+++|++.+ |++|++|++|++
T Consensus 171 ~~~~~~~~~~~s~~~~~~~~--~~~g~~~~~~~~~~~~~~~~--~gG~~~l~~~l~~~l---------g~~i~~~~~V~~ 237 (453)
T 2yg5_A 171 GGMLTKPAHSFSALQAVLMA--ASAGSFSHLVDEDFILDKRV--IGGMQQVSIRMAEAL---------GDDVFLNAPVRT 237 (453)
T ss_dssp CCCCCSCTTSSBHHHHHHHH--HHTTCHHHHHCHHHHTCEEE--TTCTHHHHHHHHHHH---------GGGEECSCCEEE
T ss_pred hhcccCCcccccHHHHHHHh--ccCCcHhhhccCCCcceEEE--cCChHHHHHHHHHhc---------CCcEEcCCceEE
Confidence 45688888 99988764321 1111 123444 899999999999986 678999999999
Q ss_pred EEecCCe-EEEEeCCCcEEEcCEEEEecChhhhccCcccccCCCCHHHHHHHhhcCCCcceEEEEEcCCCCcCCCCCcce
Q 021822 79 INQSKNK-VIITTEDGSVYHANYVIVTVSVGVLQSDLIGFVPRLPLWKKLAINNFDMAIYTKIFMKFPYKFWPTGPGTEF 157 (307)
Q Consensus 79 I~~~~~~-v~V~~~~G~~~~ad~VI~a~P~~~l~~~~i~~~p~l~~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~~~ 157 (307)
|..++++ +.|++ +|+++.||+||+|+|+..+++ +.+.|.+|+.+.++++++.+++..|+++.|+++||+.. +...
T Consensus 238 i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~~~~~--l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~-~~~g 313 (453)
T 2yg5_A 238 VKWNESGATVLAD-GDIRVEASRVILAVPPNLYSR--ISYDPPLPRRQHQMHQHQSLGLVIKVHAVYETPFWRED-GLSG 313 (453)
T ss_dssp EEEETTEEEEEET-TTEEEEEEEEEECSCGGGGGG--SEEESCCCHHHHHHGGGEEECCEEEEEEEESSCGGGGG-TEEE
T ss_pred EEEeCCceEEEEE-CCeEEEcCEEEEcCCHHHHhc--CEeCCCCCHHHHHHHhcCCCcceEEEEEEECCCCCCCC-CCCc
Confidence 9998888 88887 677899999999999999987 55789999988899999999999999999999999752 1111
Q ss_pred EEeecCCCCceeeeeeccccCCC-CceEEEEecchhhHHHhhCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEecccCcC
Q 021822 158 LLYAHETRGYFTIWQHLENELPG-ENMIFVTVTDEESRRIEQQSEKKTKAEIMQVLKKMFGNGKQIPEPDTMLIPKWWSN 236 (307)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~g-~~~l~~~~~~~~a~~~~~~~~e~~~~~~~~~L~~~~p~g~~~~~~~~~~~~~W~~~ 236 (307)
....+ +.+...+|... .+++ .++|++++.++.+..|.+++++++.+.++++|++++| .++.+|..+..++|..+
T Consensus 314 ~~~~~-~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~--~~~~~p~~~~~~~W~~~ 388 (453)
T 2yg5_A 314 TGFGA-SEVVQEVYDNT--NHEDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYLG--PKAEEPVVYYESDWGSE 388 (453)
T ss_dssp EEECT-TSSSCEEEECC--CTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHHHC--GGGGCCSEEEECCTTTC
T ss_pred eeecC-CCCeEEEEeCC--CCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHHhC--ccCCCccEEEEeecCCC
Confidence 11222 22332333321 2333 4678888887778889899999999999999999995 34557888889999999
Q ss_pred CCCCCcCC-CCCCCCChhhhhHhhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHh
Q 021822 237 RLYKGSYS-NWPNGYTLHSYHDLQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLK 299 (307)
Q Consensus 237 ~~~~g~y~-~~~~g~~~~~~~~~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~ 299 (307)
+|+.|+|. ...||......+.+.+|.++|||||++++..++|+|+||+.||++||++|++.++
T Consensus 389 ~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 452 (453)
T 2yg5_A 389 EWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAEGYQHVDGAVRMGQRTAADIIARSK 452 (453)
T ss_dssp TTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCSTTTTSHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCCcCcCCCCccccchHHHhCCcCceEEeecccccccccchHHHHHHHHHHHHHHHHHhc
Confidence 99999986 4577765444456788999999999999876789999999999999999998764
No 8
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=100.00 E-value=2.6e-32 Score=256.45 Aligned_cols=268 Identities=16% Similarity=0.191 Sum_probs=210.4
Q ss_pred cccccCcccccccccCCcccccc--cc-----CCCceeeeCCCCHHHHHHHHHHhhhccCCCCCCC-CeeecCCeeEEEE
Q 021822 9 DFEEAEPTRISSLKNTFPRQLME--DF-----GEDSYFVADPRGFETVVHYIANQFLSHNNNKITD-PRLKLKKTVRKIN 80 (307)
Q Consensus 9 ~~~~~~~~~~~s~~~~~~~~~~~--~~-----~~~~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g-~~i~l~~~V~~I~ 80 (307)
...++.+++++|+..++.+.... .+ ....|.+ +||+++|+++|++.+.+ .| ++|+++++|++|+
T Consensus 212 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--~gG~~~l~~~l~~~l~~------~g~~~i~~~~~V~~i~ 283 (495)
T 2vvm_A 212 LLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKF--KDGQSAFARRFWEEAAG------TGRLGYVFGCPVRSVV 283 (495)
T ss_dssp HHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEE--TTCHHHHHHHHHHHHHT------TTCEEEESSCCEEEEE
T ss_pred HHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEe--CCCHHHHHHHHHHHhhh------cCceEEEeCCEEEEEE
Confidence 34567899999988775432110 00 1234444 89999999999999976 35 7899999999999
Q ss_pred ecCCeEEEEeCCCcEEEcCEEEEecChhhhccCcccccCCCCHHHHHHHhhcCCCcceEEEEEcCCCCcCCCCCcceEEe
Q 021822 81 QSKNKVIITTEDGSVYHANYVIVTVSVGVLQSDLIGFVPRLPLWKKLAINNFDMAIYTKIFMKFPYKFWPTGPGTEFLLY 160 (307)
Q Consensus 81 ~~~~~v~V~~~~G~~~~ad~VI~a~P~~~l~~~~i~~~p~l~~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~ 160 (307)
..++++.|++.+|+++.||+||+|+|+..+++ +.|.|+||+.+.++++.+.|.+..||++.|++++|.. +...
T Consensus 284 ~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~--i~~~p~lp~~~~~ai~~~~~~~~~kv~l~~~~~~~~~-----~~g~ 356 (495)
T 2vvm_A 284 NERDAARVTARDGREFVAKRVVCTIPLNVLST--IQFSPALSTERISAMQAGHVSMCTKVHAEVDNKDMRS-----WTGI 356 (495)
T ss_dssp ECSSSEEEEETTCCEEEEEEEEECCCGGGGGG--SEEESCCCHHHHHHHHHCCCCCCEEEEEEESCGGGGG-----EEEE
T ss_pred EcCCEEEEEECCCCEEEcCEEEECCCHHHHhh--eeeCCCCCHHHHHHHHhcCCCceeEEEEEECCccCCC-----ceeE
Confidence 98888999999998899999999999999987 5578999999999999999999999999999999842 2222
Q ss_pred ecCCCCceeeeeeccccCCCCceEEEEecchhhHHHhhCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEecccCcCCCCC
Q 021822 161 AHETRGYFTIWQHLENELPGENMIFVTVTDEESRRIEQQSEKKTKAEIMQVLKKMFGNGKQIPEPDTMLIPKWWSNRLYK 240 (307)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~a~~~~~~~~e~~~~~~~~~L~~~~p~g~~~~~~~~~~~~~W~~~~~~~ 240 (307)
...+.++..+|... ..+.+..+|++++.. .+ .+++++..+.++++|++++| . ..+|..+..++|..+||+.
T Consensus 357 ~~~~~~~~~~~~~~-~~~~~~~vl~~~~~~-~~----~~~~~e~~~~~~~~L~~~~~-~--~~~~~~~~~~~W~~dp~~~ 427 (495)
T 2vvm_A 357 AYPFNKLCYAIGDG-TTPAGNTHLVCFGNS-AN----HIQPDEDVRETLKAVGQLAP-G--TFGVKRLVFHNWVKDEFAK 427 (495)
T ss_dssp ECSSCSSCEEEEEE-ECTTSCEEEEEEECS-TT----CCCTTTCHHHHHHHHHTTST-T--SCCEEEEEECCTTTCTTTS
T ss_pred ecCCCCcEEEecCC-CCCCCCeEEEEEeCc-cc----cCCCHHHHHHHHHHHHHhcC-C--CCCceEEEEeEcCCCCCCC
Confidence 22223333344322 224456777777643 22 14556677889999999986 4 3467788889999999999
Q ss_pred CcCCCCCCCCChhhhhHhhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHhh
Q 021822 241 GSYSNWPNGYTLHSYHDLQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLKH 300 (307)
Q Consensus 241 g~y~~~~~g~~~~~~~~~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~~ 300 (307)
|+|+.+.||......+.+..|.++|||||++++..++|+||||++||++||++|++.++.
T Consensus 428 g~y~~~~~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~g~veGAi~SG~raA~~i~~~l~~ 487 (495)
T 2vvm_A 428 GAWFFSRPGMVSECLQGLREKHGGVVFANSDWALGWRSFIDGAIEEGTRAARVVLEELGT 487 (495)
T ss_dssp SSSCCCCTTHHHHHHHHHHCCBTTEEECCGGGCSSSTTSHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCccCcCCCcchhhHHHHhCcCCCEEEechhhhcCCceEEEhHHHHHHHHHHHHHHHhcc
Confidence 999988999865567788899999999999999777899999999999999999998865
No 9
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.98 E-value=1.5e-31 Score=251.44 Aligned_cols=241 Identities=22% Similarity=0.264 Sum_probs=193.7
Q ss_pred CCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCc----EEEcCEEEEecChhhhccCccccc
Q 021822 43 PRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGS----VYHANYVIVTVSVGVLQSDLIGFV 118 (307)
Q Consensus 43 ~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~----~~~ad~VI~a~P~~~l~~~~i~~~ 118 (307)
+|||++|+++|++.+. .+|++|++|++|+.++++|.|++.+|+ ++.||+||+|+|+..+.+ +.|.
T Consensus 237 ~gG~~~l~~~l~~~l~---------~~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~--i~f~ 305 (498)
T 2iid_A 237 VDGMDKLPTAMYRDIQ---------DKVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAVRL--IKFN 305 (498)
T ss_dssp TTCTTHHHHHHHHHTG---------GGEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHHHHTT--SEEE
T ss_pred CCcHHHHHHHHHHhcc---------cccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChHHHhh--eecC
Confidence 8999999999999974 379999999999999888999887764 589999999999999887 6688
Q ss_pred CCCCHHHHHHHhhcCCCcceEEEEEcCCCCcCC-CCCcceEEeecCCCCceeeeeeccccCCCCceEEEEecchhhHHHh
Q 021822 119 PRLPLWKKLAINNFDMAIYTKIFMKFPYKFWPT-GPGTEFLLYAHETRGYFTIWQHLENELPGENMIFVTVTDEESRRIE 197 (307)
Q Consensus 119 p~l~~~~~~~i~~~~~~~~~kv~l~~~~~~w~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~a~~~~ 197 (307)
|+||+.+.++++++.|++..||++.|+++||.+ +..... ...+ .+...++......+.+.++|++|+.++.+..+.
T Consensus 306 p~Lp~~~~~ai~~l~~~~~~kv~l~~~~~~w~~~~~~~~~-~~~~--~~~~~~~~~s~~~p~g~~~L~~~~~g~~a~~~~ 382 (498)
T 2iid_A 306 PPLLPKKAHALRSVHYRSGTKIFLTCTTKFWEDDGIHGGK-STTD--LPSRFIYYPNHNFTNGVGVIIAYGIGDDANFFQ 382 (498)
T ss_dssp SCCCHHHHHHHHHCCEECEEEEEEEESSCGGGGGTCCSSE-EEES--STTCEEECCSSCCTTSCEEEEEEEEHHHHHTTT
T ss_pred CCCCHHHHHHHHhCCCcceeEEEEEeCCCCccCCCccCCc-ccCC--CCcceEEECCCCCCCCCcEEEEEeCCccHhhhh
Confidence 999999999999999999999999999999976 221111 1221 121122221112345677888888877777788
Q ss_pred hCCHHHHHHHHHHHHHHHhCCCCCCCC----CceEEecccCcCCCCCCcCCCCCCCCChhhhhHhhCCCCcEEEeccccc
Q 021822 198 QQSEKKTKAEIMQVLKKMFGNGKQIPE----PDTMLIPKWWSNRLYKGSYSNWPNGYTLHSYHDLQQPFGRIYFAGEHTN 273 (307)
Q Consensus 198 ~~~~e~~~~~~~~~L~~~~p~g~~~~~----~~~~~~~~W~~~~~~~g~y~~~~~g~~~~~~~~~~~p~~~l~~aGd~~~ 273 (307)
.++++++.+.++++|++++ +...+. ......++|..+||+.|+|+...|+......+.+.+|.++|||||++++
T Consensus 383 ~~~~~~~~~~~l~~L~~~~--g~~~~~~~~~~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~~p~~~l~fAGe~t~ 460 (498)
T 2iid_A 383 ALDFKDCADIVFNDLSLIH--QLPKKDIQSFCYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLTASQGRIYFAGEYTA 460 (498)
T ss_dssp TSCHHHHHHHHHHHHHHHH--TCCHHHHHHHEEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHHCCBTTEEECSGGGS
T ss_pred cCCHHHHHHHHHHHHHHHc--CCChhhhhhhcCccEEEecCCCCCCCceeeecCCcchHHHHHHHhCCCCcEEEEEcccc
Confidence 8999999999999999999 432111 1235779999999999999888888765556778889999999999998
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHhh
Q 021822 274 STYLGYVDGAYFSGINTANALIKCLKH 300 (307)
Q Consensus 274 ~~~~g~~egAv~SG~~aA~~il~~l~~ 300 (307)
.. +|+|+||+.||++||++|++.+..
T Consensus 461 ~~-~g~~~GAi~SG~raA~~i~~~l~~ 486 (498)
T 2iid_A 461 QA-HGWIDSTIKSGLRAARDVNLASEN 486 (498)
T ss_dssp SS-SSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred cC-CcCHHHHHHHHHHHHHHHHHHhcC
Confidence 74 599999999999999999999865
No 10
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.97 E-value=5.8e-30 Score=240.04 Aligned_cols=243 Identities=14% Similarity=0.255 Sum_probs=188.3
Q ss_pred CCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCC---cEEEcCEEEEecChhhhccCcccccC
Q 021822 43 PRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDG---SVYHANYVIVTVSVGVLQSDLIGFVP 119 (307)
Q Consensus 43 ~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G---~~~~ad~VI~a~P~~~l~~~~i~~~p 119 (307)
+|||++|+++|++.+. .++|++|++|++|+.++++|.|++.+| +++.||+||+|+|+..+++ +.+
T Consensus 235 ~gG~~~l~~~l~~~l~--------~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~~l~~--l~~-- 302 (489)
T 2jae_A 235 VGGMDRIYYAFQDRIG--------TDNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPHLVGR--LQN-- 302 (489)
T ss_dssp TTCTTHHHHHHHHHHC--------GGGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHHHHTT--SEE--
T ss_pred cCCHHHHHHHHHHhcC--------CCeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHHHHHh--Ccc--
Confidence 8999999999999983 268999999999999999999988776 5789999999999999987 333
Q ss_pred CCCHHHHHHHhhcCCCcceEEEEEcCCCCcCCCCCcc-eEEeecCCCCceeeeeeccccCCCCceEE-EEecchhhHHHh
Q 021822 120 RLPLWKKLAINNFDMAIYTKIFMKFPYKFWPTGPGTE-FLLYAHETRGYFTIWQHLENELPGENMIF-VTVTDEESRRIE 197 (307)
Q Consensus 120 ~l~~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~l~-~~~~~~~a~~~~ 197 (307)
++|+.+.++++++.|.+..||++.|+++||.+..+.. .+... +.+...++......+...++|+ +|+.++.+..|.
T Consensus 303 ~l~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~--~~~~~~~~~~s~~~~~~~~~l~~~~~~g~~~~~~~ 380 (489)
T 2jae_A 303 NLPGDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNT--DKDISQIMFPYDHYNSDRGVVVAYYSSGKRQEAFE 380 (489)
T ss_dssp CCCHHHHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEE--SSTTCEEECCSSSTTSSCEEEEEEEEETHHHHHHH
T ss_pred CCCHHHHHHHHhCCCccceEEEEEeCCCCccCCCCcccccccC--CCCceEEEeCCCCCCCCCCEEEEEeeCCchhhhhh
Confidence 7888888999999999999999999999997531111 11122 2233333322211111234554 577888888899
Q ss_pred hCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEecccCcCCCCCCcCCCCC------CCCChhhhhHhhCCCCcEEEeccc
Q 021822 198 QQSEKKTKAEIMQVLKKMFGNGKQIPEPDTMLIPKWWSNRLYKGSYSNWP------NGYTLHSYHDLQQPFGRIYFAGEH 271 (307)
Q Consensus 198 ~~~~e~~~~~~~~~L~~~~p~g~~~~~~~~~~~~~W~~~~~~~g~y~~~~------~g~~~~~~~~~~~p~~~l~~aGd~ 271 (307)
.++++++.+.++++|++++| +....++.....++|.+++|+.|+|+.+. |+......+.+.+|.++|||||++
T Consensus 381 ~~~~~~~~~~~l~~L~~~~~-~~~~~~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~faG~~ 459 (489)
T 2jae_A 381 SLTHRQRLAKAIAEGSEIHG-EKYTRDISSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPVDKIYFAGDH 459 (489)
T ss_dssp TSCHHHHHHHHHHHHHHHHC-GGGGSSEEEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCBTTEEECSGG
T ss_pred cCCHHHHHHHHHHHHHHHcC-cchhhhccccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCCCcEEEeEHH
Confidence 99999999999999999996 41123466677789999999999997665 776555677888899999999999
Q ss_pred ccCCCCcchhHHHHHHHHHHHHHHHHHhhh
Q 021822 272 TNSTYLGYVDGAYFSGINTANALIKCLKHF 301 (307)
Q Consensus 272 ~~~~~~g~~egAv~SG~~aA~~il~~l~~~ 301 (307)
++. +.++|+||+.||++||++|++.++++
T Consensus 460 ~~~-~~~~v~gAi~sg~~aA~~i~~~l~~~ 488 (489)
T 2jae_A 460 LSN-AIAWQHGALTSARDVVTHIHERVAQE 488 (489)
T ss_dssp GBS-STTSHHHHHHHHHHHHHHHHHHHHC-
T ss_pred hcc-CccHHHHHHHHHHHHHHHHHHHHhhc
Confidence 975 56899999999999999999988765
No 11
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.97 E-value=1.6e-29 Score=233.25 Aligned_cols=254 Identities=18% Similarity=0.229 Sum_probs=192.7
Q ss_pred ccccCcccccccccCCcccccc-----c-cCCCceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecC
Q 021822 10 FEEAEPTRISSLKNTFPRQLME-----D-FGEDSYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSK 83 (307)
Q Consensus 10 ~~~~~~~~~~s~~~~~~~~~~~-----~-~~~~~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~ 83 (307)
..++.+++++|+..+....... . +.+.+..+ ++|++.++++|++.+ | +|++|++|++|+.++
T Consensus 166 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~l~~~~~~~~---------g-~i~~~~~V~~i~~~~ 233 (431)
T 3k7m_X 166 NMLGQPADQASALWMLQLVAAHHYSILGVVLSLDEVF--SNGSADLVDAMSQEI---------P-EIRLQTVVTGIDQSG 233 (431)
T ss_dssp HHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCEEE--TTCTHHHHHHHHTTC---------S-CEESSCCEEEEECSS
T ss_pred HhcCCChhhhhHHHHHHHHHhcCCccceeecchhhhc--CCcHHHHHHHHHhhC---------C-ceEeCCEEEEEEEcC
Confidence 3456677777776654211100 0 11112233 799999999999874 6 899999999999988
Q ss_pred CeEEEEeCCCcEEEcCEEEEecChhhhccCcccccCCCCHHHHHHHhhcCCCcceEEEEEcCCCCcCCCCCcceEEeecC
Q 021822 84 NKVIITTEDGSVYHANYVIVTVSVGVLQSDLIGFVPRLPLWKKLAINNFDMAIYTKIFMKFPYKFWPTGPGTEFLLYAHE 163 (307)
Q Consensus 84 ~~v~V~~~~G~~~~ad~VI~a~P~~~l~~~~i~~~p~l~~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~ 163 (307)
+++.|++.+|+++.||+||+|+|++.+++ +.+.|++|..+.+++..+.+...+||.+.|+++++. ++. ..
T Consensus 234 ~~v~v~~~~g~~~~ad~vi~a~~~~~l~~--i~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~~~------i~~--~~ 303 (431)
T 3k7m_X 234 DVVNVTVKDGHAFQAHSVIVATPMNTWRR--IVFTPALPERRRSVIEEGHGGQGLKILIHVRGAEAG------IEC--VG 303 (431)
T ss_dssp SSEEEEETTSCCEEEEEEEECSCGGGGGG--SEEESCCCHHHHHHHHHCCCCCEEEEEEEEESCCTT------EEE--EB
T ss_pred CeEEEEECCCCEEEeCEEEEecCcchHhh--eeeCCCCCHHHHHHHHhCCCcceEEEEEEECCCCcC------ceE--cC
Confidence 89999999998899999999999999987 678899999999999999999999999999998741 222 11
Q ss_pred CCCceeeeeeccccCCCCceEEEEecchhhHHHhhCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEecccCcCCCCCCcC
Q 021822 164 TRGYFTIWQHLENELPGENMIFVTVTDEESRRIEQQSEKKTKAEIMQVLKKMFGNGKQIPEPDTMLIPKWWSNRLYKGSY 243 (307)
Q Consensus 164 ~~~~~~~~~~~~~~~~g~~~l~~~~~~~~a~~~~~~~~e~~~~~~~~~L~~~~p~g~~~~~~~~~~~~~W~~~~~~~g~y 243 (307)
+......+... ....+..+|.+++.++. +...++ +.+++.|++++| +. .+..+..++|..+||+.|+|
T Consensus 304 d~~~~~~~~~~-~~~~~~~~l~~~~~g~~---~~~~~~----~~~~~~l~~~~~-~~---~~~~~~~~~W~~d~~~~G~~ 371 (431)
T 3k7m_X 304 DGIFPTLYDYC-EVSESERLLVAFTDSGS---FDPTDI----GAVKDAVLYYLP-EV---EVLGIDYHDWIADPLFEGPW 371 (431)
T ss_dssp SSSSSEEEEEE-ECSSSEEEEEEEEETTT---CCTTCH----HHHHHHHHHHCT-TC---EEEEEECCCTTTCTTTSSSS
T ss_pred CCCEEEEEeCc-CCCCCCeEEEEEecccc---CCCCCH----HHHHHHHHHhcC-CC---CccEeEecccCCCCCCCCCC
Confidence 21111222221 11245567777776544 222233 246677888887 43 26778889999999999999
Q ss_pred CCCCCCCChhhhhHhhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHH
Q 021822 244 SNWPNGYTLHSYHDLQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKC 297 (307)
Q Consensus 244 ~~~~~g~~~~~~~~~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~ 297 (307)
+.+.||.....++.+.+|.++|||||++++..|+|||+||++||+|||++||..
T Consensus 372 ~~~~~g~~~~~~~~l~~p~g~~~fAGe~t~~~~~g~~~GA~~sg~raa~~i~~~ 425 (431)
T 3k7m_X 372 VAPRVGQFSRVHKELGEPAGRIHFVGSDVSLEFPGYIEGALETAECAVNAILHS 425 (431)
T ss_dssp CCCCTTTTTTSSGGGGSCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHC
T ss_pred CCcCCCCCcccHHHHhCCCCcEEEEehhhhccCCeEehHHHHHHHHHHHHHHhh
Confidence 999999877778899999999999999999888999999999999999999964
No 12
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.96 E-value=2.6e-29 Score=241.33 Aligned_cols=271 Identities=15% Similarity=0.204 Sum_probs=190.7
Q ss_pred cccccccccCCccccccccCCCceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeE--EEEecCCe-------
Q 021822 15 PTRISSLKNTFPRQLMEDFGEDSYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVR--KINQSKNK------- 85 (307)
Q Consensus 15 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~--~I~~~~~~------- 85 (307)
+....|++.+... .+..++...+.+ .|||++|+++|++.+.. |+.|+++++|+ +|..++++
T Consensus 318 ~~~~~S~le~L~~-~~~~~~~~~~~i--~GG~~~L~~aLa~~l~~-------g~~I~l~~~V~~~~I~~~~~g~~~~~~~ 387 (721)
T 3ayj_A 318 PLYNISLVEMMRL-ILWDYSNEYTLP--VTENVEFIRNLFLKAQN-------VGAGKLVVQVRQERVANACHSGTASARA 387 (721)
T ss_dssp GGTTBBHHHHHHH-HHTTTTCEECCS--SSSTHHHHHHHHHHHHH-------HTTTSEEEEEECEEEEEEEECSSSSCCE
T ss_pred CccchhHHHHHHH-HhcCCccceeEE--CCcHHHHHHHHHHhccc-------CCceEeCCEEEeeeEEECCCCCccccce
Confidence 3345666654321 122333334444 79999999999999732 57899999999 99987554
Q ss_pred EEE-EeCCCc--EEEcCEEEEecChhhhcc----Cccc----------------------ccCCC-C-------HHHHHH
Q 021822 86 VII-TTEDGS--VYHANYVIVTVSVGVLQS----DLIG----------------------FVPRL-P-------LWKKLA 128 (307)
Q Consensus 86 v~V-~~~~G~--~~~ad~VI~a~P~~~l~~----~~i~----------------------~~p~l-~-------~~~~~~ 128 (307)
|+| .+.+|+ ++.||+||+|+|++.|.. ..+. ++|.| | ..+..+
T Consensus 388 V~V~~~~~G~~~~~~aD~VIvTvP~~~L~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~A 467 (721)
T 3ayj_A 388 QLLSYDSHNAVHSEAYDFVILAVPHDQLTPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTA 467 (721)
T ss_dssp EEEEEETTCCEEEEEESEEEECSCHHHHHHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHH
T ss_pred EEEEEecCCceEEEEcCEEEECCCHHHHhhccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHH
Confidence 888 446676 789999999999999842 1233 23436 8 888999
Q ss_pred HhhcCCCcceEEEEEc-----CCCCcCCCCCcc-eEEeecCCCCceeeee-e--c--cccCCCCc-eEEEEecchhhHHH
Q 021822 129 INNFDMAIYTKIFMKF-----PYKFWPTGPGTE-FLLYAHETRGYFTIWQ-H--L--ENELPGEN-MIFVTVTDEESRRI 196 (307)
Q Consensus 129 i~~~~~~~~~kv~l~~-----~~~~w~~~~~~~-~~~~~~~~~~~~~~~~-~--~--~~~~~g~~-~l~~~~~~~~a~~~ 196 (307)
+++++|++..||++.| +++||+++.+.. ...+ ++.+...+|. . . +..+++++ +|..|+++.++..|
T Consensus 468 i~~l~~~~s~Kv~l~~~~~~~~~~fW~~~~g~~i~~s~--TD~~~r~~~~~p~p~~~d~~~~~~gvlL~sYtwg~dA~~~ 545 (721)
T 3ayj_A 468 IGQLHMARSSKVFATVKTAALDQPWVPQWRGEPIKAVV--SDSGLAASYVVPSPIVEDGQAPEYSSLLASYTWEDDSTRL 545 (721)
T ss_dssp HHTCCEECEEEEEEEEEGGGGGSTTSCEETTEECCEEE--ETTTTEEEEEEECSCC----CCSEEEEEEEEEETHHHHHH
T ss_pred HHhcCcccceEEEEEEccccCCCCcccccCCCCceeee--cCCCcceEEEeccCcccccCCCCCcEEEEEEeCccchhhh
Confidence 9999999999999999 999998741211 1122 2333322332 1 1 22234445 44558888888888
Q ss_pred ------hhCCHHHH-------HHHHHHHHH--HHhCCCCC---------C-C--CCceEEecccCcCCCCCCcCCCCCCC
Q 021822 197 ------EQQSEKKT-------KAEIMQVLK--KMFGNGKQ---------I-P--EPDTMLIPKWWSNRLYKGSYSNWPNG 249 (307)
Q Consensus 197 ------~~~~~e~~-------~~~~~~~L~--~~~p~g~~---------~-~--~~~~~~~~~W~~~~~~~g~y~~~~~g 249 (307)
..+++++. .+.++++|+ +++| +.. + . .+.++..++|..+| +.|+|..+.||
T Consensus 546 ~~~~g~~~~~~~er~~~~~~~~~~~l~~la~~~~~p-~~~~~~~~~~~~l~~~~~~~~~~~~dW~~dp-s~Gaf~~~~pg 623 (721)
T 3ayj_A 546 RHDFGLYPQNPATETGTADGMYRTMVNRAYRYVKYA-GASNAQPWWFYQLLAEARTADRFVFDWTTNK-TAGGFKLDMTG 623 (721)
T ss_dssp HTTCCSSSEESSSSSCCCHHHHHHHHHHTCCEECCT-TCSSCEECHHHHHHHTSCSTTCEEEEGGGST-TSSSEECCBTT
T ss_pred hccccccCCChHHhhhhhhHHHHHHHHHHhhhccCc-cccccccchhhhhhhhcccCceEEEeCCCCC-CCCccccCCCc
Confidence 44555455 999999999 8887 532 0 0 12456789999999 99999988999
Q ss_pred CCh------hhh--hHhhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHhh
Q 021822 250 YTL------HSY--HDLQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLKH 300 (307)
Q Consensus 250 ~~~------~~~--~~~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~~ 300 (307)
+.. .+. ..+..|.++||||||+++. ++||+|||++||.+||..|+..+..
T Consensus 624 q~~~~~l~~~~~~~~~~~~~~gri~fAGe~~S~-~~GWieGAl~Sa~~Aa~~i~~~~~~ 681 (721)
T 3ayj_A 624 DHHQSNLCFRYHTHALAASLDNRFFIASDSYSH-LGGWLEGAFMSALNAVAGLIVRANR 681 (721)
T ss_dssp THHHHHHHHHGGGGGGCTTTCCCEEECSGGGSS-CTTSHHHHHHHHHHHHHHHHHHHTT
T ss_pred cchhhhhhhhhhhhccccCCCCCEEEeehhhcc-CCceehHHHHHHHHHHHHHHHHhcC
Confidence 831 111 1234567899999999986 6899999999999999999998766
No 13
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.94 E-value=7.5e-26 Score=202.63 Aligned_cols=235 Identities=13% Similarity=0.133 Sum_probs=172.9
Q ss_pred CceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChhhhccCcc
Q 021822 36 DSYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVGVLQSDLI 115 (307)
Q Consensus 36 ~~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~~l~~~~i 115 (307)
..++.. .+||++++++|++.+ |.+|+++++|++|+.++++|.|++.+|+++.||.||+|+|++.+.+++-
T Consensus 102 ~~~~~~-~~g~~~l~~~l~~~~---------g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~ 171 (342)
T 3qj4_A 102 DCNFVA-PQGISSIIKHYLKES---------GAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPVPEILQLQG 171 (342)
T ss_dssp CEEEEC-TTCTTHHHHHHHHHH---------TCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCHHHHTTCBS
T ss_pred ccceec-CCCHHHHHHHHHHhc---------CCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHHHHHhc
Confidence 345555 799999999999986 7899999999999999889999998887789999999999999987543
Q ss_pred cccCCCCHHHHHHHhhcCCCcceEEEEEcCCCCcCCCCCcceEEeecCCCCceeeeeeccc---c-CCCCceEEEEecch
Q 021822 116 GFVPRLPLWKKLAINNFDMAIYTKIFMKFPYKFWPTGPGTEFLLYAHETRGYFTIWQHLEN---E-LPGENMIFVTVTDE 191 (307)
Q Consensus 116 ~~~p~l~~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~g~~~l~~~~~~~ 191 (307)
.+.|.||+.....++++.|.++.+|++.|++++|.+.+ ...+.. +....+..++.+... . +++..+++++..++
T Consensus 172 ~~~~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~-~~g~~~-~~~~~~~~~~~~~~k~~r~~~~~~~~~v~~~~~~ 249 (342)
T 3qj4_A 172 DITTLISECQRQQLEAVSYSSRYALGLFYEAGTKIDVP-WAGQYI-TSNPCIRFVSIDNKKRNIESSEIGPSLVIHTTVP 249 (342)
T ss_dssp THHHHSCHHHHHHHHTCCBCCEEEEEEECSSCC--CCS-CSEEEC-SSCSSEEEEEEHHHHTTCCCC-CCCEEEEEECHH
T ss_pred ccccccCHHHHHHHhcCCccccEEEEEEECCCCccCCc-eeeEEc-cCCcceEEEEccccCCCCCCCCCCceEEEECCHH
Confidence 44566888888999999999999999999998886521 111222 222122112111111 1 12334677777888
Q ss_pred hhHHHhhCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEecccCcCCCCCCcCCC-CCCCCChhhhhHhh-CCCCcEEEec
Q 021822 192 ESRRIEQQSEKKTKAEIMQVLKKMFGNGKQIPEPDTMLIPKWWSNRLYKGSYSN-WPNGYTLHSYHDLQ-QPFGRIYFAG 269 (307)
Q Consensus 192 ~a~~~~~~~~e~~~~~~~~~L~~~~p~g~~~~~~~~~~~~~W~~~~~~~g~y~~-~~~g~~~~~~~~~~-~p~~~l~~aG 269 (307)
+++++.+++++++.+.++++|++++ + ..++|..+.++||.. +...|.. ..++ .+. .+.++|++||
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~l~~~~--g-~~~~p~~~~v~rW~~---a~p~~~~~~~~~-------~~~~~~~~~l~laG 316 (342)
T 3qj4_A 250 FGVTYLEHSIEDVQELVFQQLENIL--P-GLPQPIATKCQKWRH---SQVTNAAANCPG-------QMTLHHKPFLACGG 316 (342)
T ss_dssp HHHHTTTSCHHHHHHHHHHHHHHHS--C-SCCCCSEEEEEEETT---CSBSSCCSSSCS-------CEEEETTTEEEECS
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHhc--c-CCCCCceeeeccccc---cccccccCCCcc-------eeEecCCccEEEEc
Confidence 8888889999999999999999999 4 345788889999974 2222221 0122 222 3447899999
Q ss_pred ccccCCCCcchhHHHHHHHHHHHHHHHHH
Q 021822 270 EHTNSTYLGYVDGAYFSGINTANALIKCL 298 (307)
Q Consensus 270 d~~~~~~~g~~egAv~SG~~aA~~il~~l 298 (307)
||+.. +++|+|+.||++||++|++.|
T Consensus 317 d~~~g---~~v~~ai~sg~~aa~~i~~~l 342 (342)
T 3qj4_A 317 DGFTQ---SNFDGCITSALCVLEALKNYI 342 (342)
T ss_dssp GGGSC---SSHHHHHHHHHHHHHHHTTC-
T ss_pred cccCC---CCccHHHHHHHHHHHHHHhhC
Confidence 99975 579999999999999998643
No 14
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.93 E-value=3.3e-25 Score=206.26 Aligned_cols=263 Identities=17% Similarity=0.220 Sum_probs=188.5
Q ss_pred cccccCcccccccccCCcccc-cc-ccC----------------------CCceeeeCCCCHHHHHHHHHHhhhccCCCC
Q 021822 9 DFEEAEPTRISSLKNTFPRQL-ME-DFG----------------------EDSYFVADPRGFETVVHYIANQFLSHNNNK 64 (307)
Q Consensus 9 ~~~~~~~~~~~s~~~~~~~~~-~~-~~~----------------------~~~~~~~~~gG~~~l~~~L~~~~~~~~~~~ 64 (307)
.-.|+.+++++|+....+... +. .++ +..++.. +||+++|+++|++.+.
T Consensus 174 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~l~~~l~~~l~------ 246 (470)
T 3i6d_A 174 SGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTL-STGLQTLVEEIEKQLK------ 246 (470)
T ss_dssp HHTTCSCTTTBBHHHHCGGGCC-------------------------------EEEE-TTCTHHHHHHHHHTCC------
T ss_pred cEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEe-CChHHHHHHHHHHhcC------
Confidence 446778999999876654321 00 000 1133333 8999999999999974
Q ss_pred CCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChhhhccCcccccCCCCHHHHHHHhhcCCCcceEEEEEc
Q 021822 65 ITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVGVLQSDLIGFVPRLPLWKKLAINNFDMAIYTKIFMKF 144 (307)
Q Consensus 65 ~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~~l~~~~i~~~p~l~~~~~~~i~~~~~~~~~kv~l~~ 144 (307)
.++|+++++|++|+.+++++.|++.+|+++.||+||+|+|++.+.+ +...++ ...+++.+.|.++.++++.|
T Consensus 247 --~~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~~--l~~~~~----~~~~~~~~~~~~~~~v~l~~ 318 (470)
T 3i6d_A 247 --LTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAG--MLSELP----AISHLKNMHSTSVANVALGF 318 (470)
T ss_dssp --SEEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHHHH--HTTTST----THHHHHTCEEEEEEEEEEEE
T ss_pred --CCEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHHHH--HcCCch----hhHHHhcCCCCceEEEEEEE
Confidence 2689999999999999889999999998899999999999999987 222332 25778999999999999999
Q ss_pred CCCCcCCCCC-cceEEeecCCCCce-eeeee--cc-ccCCCCceEEEEecchhhHHHhhCCHHHHHHHHHHHHHHHhCCC
Q 021822 145 PYKFWPTGPG-TEFLLYAHETRGYF-TIWQH--LE-NELPGENMIFVTVTDEESRRIEQQSEKKTKAEIMQVLKKMFGNG 219 (307)
Q Consensus 145 ~~~~w~~~~~-~~~~~~~~~~~~~~-~~~~~--~~-~~~~g~~~l~~~~~~~~a~~~~~~~~e~~~~~~~~~L~~~~p~g 219 (307)
++++|..... ..++.....+.... .+|.+ ++ ..+.++.+|.+++.+..++.+..++++++.+.++++|++++|
T Consensus 319 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g-- 396 (470)
T 3i6d_A 319 PEGSVQMEHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKVMN-- 396 (470)
T ss_dssp SSTTCCCSSCSSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCEEEEEEECCSSCCGGGTSCHHHHHHHHHHHHGGGSC--
T ss_pred CchhcCCCCCCeEEEccCCCCCCceEEEEEcCcCCCcCCCCCEEEEEEECCCCCccccCCCHHHHHHHHHHHHHHHhC--
Confidence 9999975322 22222212221111 23322 12 234566778888877766677889999999999999999995
Q ss_pred CCCCCCceEEecccCcCCCCCCcCCCCCCCCCh---hhhhHhhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 220 KQIPEPDTMLIPKWWSNRLYKGSYSNWPNGYTL---HSYHDLQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 220 ~~~~~~~~~~~~~W~~~~~~~g~y~~~~~g~~~---~~~~~~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
.. ++|.....++|.. +++.+.+|+.. ...+.+..|.++|||||+++.. . +|++|+.||+++|++|++
T Consensus 397 ~~-~~p~~~~~~~w~~------a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g--~-gv~~a~~sG~~aA~~i~~ 466 (470)
T 3i6d_A 397 IN-GEPEMTCVTRWHE------SMPQYHVGHKQRIKELREALASAYPGVYMTGASFEG--V-GIPDCIDQGKAAVSDALT 466 (470)
T ss_dssp CC-SCCSEEEEEEEEE------EEEECBTTHHHHHHHHHHHHHHHSTTEEECSTTTSC--C-SHHHHHHHHHHHHHHHHH
T ss_pred CC-CCceEEEEEEcCC------ccCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecCCC--C-CHHHHHHHHHHHHHHHHH
Confidence 32 4678888899975 23334455432 1234555677899999998864 3 499999999999999998
Q ss_pred HH
Q 021822 297 CL 298 (307)
Q Consensus 297 ~l 298 (307)
.+
T Consensus 467 ~l 468 (470)
T 3i6d_A 467 YL 468 (470)
T ss_dssp HH
T ss_pred Hh
Confidence 87
No 15
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.93 E-value=4e-25 Score=206.50 Aligned_cols=237 Identities=14% Similarity=0.120 Sum_probs=170.7
Q ss_pred CceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEe---CCCcEEEcCEEEEecChhhhcc
Q 021822 36 DSYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITT---EDGSVYHANYVIVTVSVGVLQS 112 (307)
Q Consensus 36 ~~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~---~~G~~~~ad~VI~a~P~~~l~~ 112 (307)
..+++ +||+++|+++|++.+ |++|+++++|++|+.+++++.|++ .+|+++.||+||+|+|+..+.+
T Consensus 229 ~~~~~--~gG~~~l~~~l~~~l---------g~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ 297 (478)
T 2ivd_A 229 ALSTF--DGGLQVLIDALAASL---------GDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHATAK 297 (478)
T ss_dssp CEEEE--TTCTHHHHHHHHHHH---------GGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHHHHH
T ss_pred cEEEE--CCCHHHHHHHHHHHh---------hhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHHHHH
Confidence 34444 899999999999997 568999999999999888898888 6777899999999999999876
Q ss_pred CcccccCCCCHHHHHHHhhcCCCcceEEEEEcCCCCcCCCCCcceEEeecCCCCc-eeeeeec--c-ccCCCCceEEEEe
Q 021822 113 DLIGFVPRLPLWKKLAINNFDMAIYTKIFMKFPYKFWPTGPGTEFLLYAHETRGY-FTIWQHL--E-NELPGENMIFVTV 188 (307)
Q Consensus 113 ~~i~~~p~l~~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~~~~--~-~~~~g~~~l~~~~ 188 (307)
+.|++++.+.++++++.|.++.++++.|++++|+...+..++....++.+. ..+|.+. . ..+++..+|++++
T Consensus 298 ----ll~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~ 373 (478)
T 2ivd_A 298 ----LLRPLDDALAALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLYSCMV 373 (478)
T ss_dssp ----HHTTTCHHHHHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEHHHHCGGGBSTTCEEEEEEE
T ss_pred ----HhhccCHHHHHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEEcccCCCcCCCCCEEEEEEe
Confidence 346788888899999999999999999999988752111122111112221 1233221 1 1345667788888
Q ss_pred cchhhHHHhhCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEecccCcCCCCCCcCCCCCCCCChhh---hhHhhCCCCcE
Q 021822 189 TDEESRRIEQQSEKKTKAEIMQVLKKMFGNGKQIPEPDTMLIPKWWSNRLYKGSYSNWPNGYTLHS---YHDLQQPFGRI 265 (307)
Q Consensus 189 ~~~~a~~~~~~~~e~~~~~~~~~L~~~~p~g~~~~~~~~~~~~~W~~~~~~~g~y~~~~~g~~~~~---~~~~~~p~~~l 265 (307)
.+..+..+.+++++++.+.++++|.+++| .. .+|.....++|.. +++.+.++..... .+.+.. .++|
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~--~~p~~~~~~~w~~------~~p~~~~g~~~~~~~~~~~~~~-~~~l 443 (478)
T 2ivd_A 374 GGARQPGLVEQDEDALAALAREELKALAG-VT--ARPSFTRVFRWPL------GIPQYNLGHLERVAAIDAALQR-LPGL 443 (478)
T ss_dssp ECTTCGGGGGSCHHHHHHHHHHHHHHHHC-CC--SCCSEEEEEEESS------CCBCCBTTHHHHHHHHHHHHHT-STTE
T ss_pred CCcCCccccCCCHHHHHHHHHHHHHHHhC-CC--CCCcEEEEEECCC------cccCCCcCHHHHHHHHHHHHhh-CCCE
Confidence 77666667788999999999999999997 43 3677777789974 3434456653211 112222 5799
Q ss_pred EEecccccCCCCcchhHHHHHHHHHHHHHHHHHhh
Q 021822 266 YFAGEHTNSTYLGYVDGAYFSGINTANALIKCLKH 300 (307)
Q Consensus 266 ~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~~ 300 (307)
||||+++.. ++|+||+.||++||++|++.++.
T Consensus 444 ~~aG~~~~g---~gv~gA~~SG~~aA~~i~~~l~~ 475 (478)
T 2ivd_A 444 HLIGNAYKG---VGLNDCIRNAAQLADALVAGNTS 475 (478)
T ss_dssp EECSTTTSC---CSHHHHHHHHHHHHHHHCC----
T ss_pred EEEccCCCC---CCHHHHHHHHHHHHHHHHHhhcc
Confidence 999999743 35999999999999999877643
No 16
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.93 E-value=1.3e-24 Score=202.81 Aligned_cols=263 Identities=13% Similarity=0.166 Sum_probs=187.0
Q ss_pred ccccccCcccccccccCCcccc-cc-cc-------------------------CCCceeeeCCCCHHHHHHHHHHhhhcc
Q 021822 8 NDFEEAEPTRISSLKNTFPRQL-ME-DF-------------------------GEDSYFVADPRGFETVVHYIANQFLSH 60 (307)
Q Consensus 8 ~~~~~~~~~~~~s~~~~~~~~~-~~-~~-------------------------~~~~~~~~~~gG~~~l~~~L~~~~~~~ 60 (307)
+.-.++.+++++|+...++.+. ++ .+ .+..++.. +||+++|+++|++.+.
T Consensus 171 ~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~~~l~~~l~~~l~-- 247 (475)
T 3lov_A 171 LSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSL-ETGLESLIERLEEVLE-- 247 (475)
T ss_dssp HHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEE-TTCHHHHHHHHHHHCS--
T ss_pred hceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEee-CChHHHHHHHHHhhcc--
Confidence 3456889999999987765431 00 00 12234444 8999999999999974
Q ss_pred CCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChhhhccCcccccCCCCHHHHHHHhhcCCCcceEE
Q 021822 61 NNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVGVLQSDLIGFVPRLPLWKKLAINNFDMAIYTKI 140 (307)
Q Consensus 61 ~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~~l~~~~i~~~p~l~~~~~~~i~~~~~~~~~kv 140 (307)
.++|+++++|++|+.++++|.|++.+| ++.||+||+|+|++.+.+ +...+++ .+++.+.|.++.++
T Consensus 248 ------~~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~~--ll~~~~~-----~~~~~~~~~~~~~v 313 (475)
T 3lov_A 248 ------RSEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQVVQ--LLPDAHL-----PELEQLTTHSTATV 313 (475)
T ss_dssp ------SCEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHHHH--HCTTSCC-----HHHHTCCEEEEEEE
T ss_pred ------CCEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHHHH--HcCccCH-----HHHhcCCCCeEEEE
Confidence 268999999999999989999999999 899999999999999987 2233333 67789999999999
Q ss_pred EEEcCCCCcCCCCCcceEEeec-CCCCce-eeeee--ccccCCCCceEEEEecchhhHHHhhCCHHHHHHHHHHHHHHHh
Q 021822 141 FMKFPYKFWPTGPGTEFLLYAH-ETRGYF-TIWQH--LENELPGENMIFVTVTDEESRRIEQQSEKKTKAEIMQVLKKMF 216 (307)
Q Consensus 141 ~l~~~~~~w~~~~~~~~~~~~~-~~~~~~-~~~~~--~~~~~~g~~~l~~~~~~~~a~~~~~~~~e~~~~~~~~~L~~~~ 216 (307)
++.|+++++.+ .....+...+ .+..+. .+|.+ ++...++..+|.+++.+..+..+.+++++++.+.++++|++++
T Consensus 314 ~l~~~~~~~~~-~~g~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~L~~~~ 392 (475)
T 3lov_A 314 TMIFDQQQSLP-IEGTGFVVNRRAPYSITACTAIDQKWNHSAPDHTVLRAFVGRPGNDHLVHESDEVLQQAVLQDLEKIC 392 (475)
T ss_dssp EEEEECCSSCS-SSSSEEEECTTSSCSEEEEEEHHHHCTTTCTTEEEEEEEECBTTBCGGGGSCHHHHHHHHHHHHHHHH
T ss_pred EEEECCcCCCC-CCCEEEEecCCCCCceEEEEEEcccCCCCCCCcEEEEEEeCCCCCCcccCCCHHHHHHHHHHHHHHHh
Confidence 99999988332 2211122222 222111 12321 1122233566777887766667788999999999999999999
Q ss_pred CCCCCCCCCceEEecccCcCCCCCCcCCCCCCCCCh---hhhhHhhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHH
Q 021822 217 GNGKQIPEPDTMLIPKWWSNRLYKGSYSNWPNGYTL---HSYHDLQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANA 293 (307)
Q Consensus 217 p~g~~~~~~~~~~~~~W~~~~~~~g~y~~~~~g~~~---~~~~~~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~ 293 (307)
+ .. .+|....+++|... ++.+.+|+.. ...+.+..|.++|||||+++.. .+|++|+.||+++|++
T Consensus 393 g--~~-~~p~~~~v~~w~~a------~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g---~g~~~a~~sG~~aA~~ 460 (475)
T 3lov_A 393 G--RT-LEPKQVIISRLMDG------LPAYTVGHADRIQRVREEVLAQYPGIYLAGLAYDG---VGLPDCVASAKTMIES 460 (475)
T ss_dssp S--SC-CCCSEEEEEEEEEE------EECCCTTHHHHHHHHHHHHHHHSTTEEECSTTTSC---SSHHHHHHHHHHHHHH
T ss_pred C--CC-CCCeEEEEEEcccC------CCCCCCChHHHHHHHHHHHHhhCCCEEEEccCCCC---CCHHHHHHHHHHHHHH
Confidence 5 33 36888889999863 2334556532 1234455677899999998874 3599999999999999
Q ss_pred HHHHHhh
Q 021822 294 LIKCLKH 300 (307)
Q Consensus 294 il~~l~~ 300 (307)
|++.+..
T Consensus 461 i~~~l~~ 467 (475)
T 3lov_A 461 IELEQSH 467 (475)
T ss_dssp HHHTC--
T ss_pred HHHHhhc
Confidence 9998765
No 17
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.92 E-value=7.9e-25 Score=205.85 Aligned_cols=241 Identities=18% Similarity=0.221 Sum_probs=170.8
Q ss_pred ceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCe------EEEEeC--CC---cEEEcCEEEEec
Q 021822 37 SYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNK------VIITTE--DG---SVYHANYVIVTV 105 (307)
Q Consensus 37 ~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~------v~V~~~--~G---~~~~ad~VI~a~ 105 (307)
.+++ +|||++|+++|++.+. .++|++|++|++|..++++ +.|++. +| +++.||+||+|+
T Consensus 235 ~~~~--~GG~~~l~~~l~~~l~--------~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~ 304 (504)
T 1sez_A 235 SFSF--LGGMQTLTDAICKDLR--------EDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTA 304 (504)
T ss_dssp CBEE--TTCTHHHHHHHHTTSC--------TTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECS
T ss_pred eEee--CcHHHHHHHHHHhhcc--------cceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECC
Confidence 4454 8999999999999862 2689999999999988776 777664 45 578999999999
Q ss_pred ChhhhccCccc-ccCCCCHHHHHHHhhcCCCcceEEEEEcCCCCcCCCCC-cceEEeecCC----CCceeeeee--cc-c
Q 021822 106 SVGVLQSDLIG-FVPRLPLWKKLAINNFDMAIYTKIFMKFPYKFWPTGPG-TEFLLYAHET----RGYFTIWQH--LE-N 176 (307)
Q Consensus 106 P~~~l~~~~i~-~~p~l~~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~-~~~~~~~~~~----~~~~~~~~~--~~-~ 176 (307)
|+..+.+++.. ..+++++. .+..+.|.++.+|.+.|++++|..... ..+++...+. .....+|.+ ++ .
T Consensus 305 p~~~l~~ll~~~~~~~~~~~---~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~s~~~~~~ 381 (504)
T 1sez_A 305 PLCDVKSMKIAKRGNPFLLN---FIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLFSSMMFPDR 381 (504)
T ss_dssp CHHHHHTSEEESSSSBCCCT---TSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEEHHHHCGGG
T ss_pred CHHHHHHHhhcccCCcccHH---HHhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEeeccccCCc
Confidence 99999873210 01234332 257788999999999999999976332 2222211111 111123321 12 2
Q ss_pred cCCCCceEEEEecchhhHHHhhCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEecccCcCCCCCCcCCCCCCCCChh--h
Q 021822 177 ELPGENMIFVTVTDEESRRIEQQSEKKTKAEIMQVLKKMFGNGKQIPEPDTMLIPKWWSNRLYKGSYSNWPNGYTLH--S 254 (307)
Q Consensus 177 ~~~g~~~l~~~~~~~~a~~~~~~~~e~~~~~~~~~L~~~~p~g~~~~~~~~~~~~~W~~~~~~~g~y~~~~~g~~~~--~ 254 (307)
.+++..+|++|+++..+..+..++++++.+.++++|+++++ . . .+|.....++|.+ +|+.+.+|+... .
T Consensus 382 ~p~g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g-~-~-~~p~~~~~~~w~~------~~p~~~~g~~~~~~~ 452 (504)
T 1sez_A 382 APNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLG-A-E-GEPTYVNHLYWSK------AFPLYGHNYDSVLDA 452 (504)
T ss_dssp SCTTEEEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHC-B-C-SCCSSEEEEEEEE------EEECCCTTHHHHHHH
T ss_pred CCCCCEEEEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhC-C-C-CCCeEEEEeECCC------CCCccCcCHHHHHHH
Confidence 35566778888887777778889999999999999999995 3 2 3577788899975 333444554221 1
Q ss_pred hhHhhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHhhhh
Q 021822 255 YHDLQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLKHFC 302 (307)
Q Consensus 255 ~~~~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~~~~ 302 (307)
.....+|.++|||||++++. ++|++|+.||++||++|++.+..+.
T Consensus 453 ~~~~~~~~~~l~~aG~~~~g---~~v~gai~sG~~aA~~il~~l~~~~ 497 (504)
T 1sez_A 453 IDKMEKNLPGLFYAGNHRGG---LSVGKALSSGCNAADLVISYLESVS 497 (504)
T ss_dssp HHHHHHHSTTEEECCSSSSC---SSHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHhCCCEEEEeecCCC---CCHHHHHHHHHHHHHHHHHHHhhcc
Confidence 23344567899999999863 5799999999999999999887644
No 18
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.91 E-value=1.2e-23 Score=196.37 Aligned_cols=261 Identities=15% Similarity=0.146 Sum_probs=186.9
Q ss_pred cccCcccccccccCCccccc-c-cc----------------------------CCCceeeeCCCCHHHHHHHHHHhhhcc
Q 021822 11 EEAEPTRISSLKNTFPRQLM-E-DF----------------------------GEDSYFVADPRGFETVVHYIANQFLSH 60 (307)
Q Consensus 11 ~~~~~~~~~s~~~~~~~~~~-~-~~----------------------------~~~~~~~~~~gG~~~l~~~L~~~~~~~ 60 (307)
.|+.+++++|+..+++.... + .+ +...+++ +|||++|+++|++.+.+
T Consensus 170 ~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~gG~~~l~~~l~~~l~~- 246 (477)
T 3nks_A 170 VFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSL--RGGLEMLPQALETHLTS- 246 (477)
T ss_dssp HHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHTTCSEEEE--TTCTTHHHHHHHHHHHH-
T ss_pred cccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhcccCccEEEE--CCCHHHHHHHHHHHHHh-
Confidence 47889999999887653211 0 11 1123444 89999999999999987
Q ss_pred CCCCCCCCeeecCCeeEEEEecCCe-EEEEeCCCcEEEcCEEEEecChhhhccCcccccCCCCHHHHHHHhhcCCCcceE
Q 021822 61 NNNKITDPRLKLKKTVRKINQSKNK-VIITTEDGSVYHANYVIVTVSVGVLQSDLIGFVPRLPLWKKLAINNFDMAIYTK 139 (307)
Q Consensus 61 ~~~~~~g~~i~l~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VI~a~P~~~l~~~~i~~~p~l~~~~~~~i~~~~~~~~~k 139 (307)
.|++|+++++|++|+.++++ +.|++ +|.++.||+||+|+|++.+.+ +.+++++.....+.++.|.++.+
T Consensus 247 -----~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~~~~~~----ll~~~~~~~~~~l~~~~~~~~~~ 316 (477)
T 3nks_A 247 -----RGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPASVLSE----LLPAEAAPLARALSAITAVSVAV 316 (477)
T ss_dssp -----TTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCHHHHHH----HSCGGGHHHHHHHHTCCEEEEEE
T ss_pred -----cCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCHHHHHH----hccccCHHHHHHHhcCCCCcEEE
Confidence 58999999999999988777 88877 445899999999999999886 23445566778889999999999
Q ss_pred EEEEcCCCCcCCCCCcceEEeecCCCCc-eeeeeec--c--ccCCCCceEEEEecchhhHHHh----hCCHHHHHHHHHH
Q 021822 140 IFMKFPYKFWPTGPGTEFLLYAHETRGY-FTIWQHL--E--NELPGENMIFVTVTDEESRRIE----QQSEKKTKAEIMQ 210 (307)
Q Consensus 140 v~l~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~~~~--~--~~~~g~~~l~~~~~~~~a~~~~----~~~~e~~~~~~~~ 210 (307)
|.+.|++++|+.. +..++....++... ..+|.+. . ..+++..+|+++++++++..+. +++++++.+.+++
T Consensus 317 v~l~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~ 395 (477)
T 3nks_A 317 VNLQYQGAHLPVQ-GFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQE 395 (477)
T ss_dssp EEEEETTCCCSSC-SSEEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEEEEEECHHHHHHHHHSSCCCCHHHHHHHHHH
T ss_pred EEEEECCCCCCCC-CceEEccCCCCCCceEEEEeccccCCCCCCCCceEEEEEECCccccccccccCCCCHHHHHHHHHH
Confidence 9999999998641 22222222212221 1233221 1 1134677888888877766654 3589999999999
Q ss_pred HHHHHhCCCCCCCCCceEEecccCcCCCCCCcCCCCCCCCChhh---hhHhhCCCCcEEEecccccCCCCcchhHHHHHH
Q 021822 211 VLKKMFGNGKQIPEPDTMLIPKWWSNRLYKGSYSNWPNGYTLHS---YHDLQQPFGRIYFAGEHTNSTYLGYVDGAYFSG 287 (307)
Q Consensus 211 ~L~~~~p~g~~~~~~~~~~~~~W~~~~~~~g~y~~~~~g~~~~~---~~~~~~p~~~l~~aGd~~~~~~~g~~egAv~SG 287 (307)
+|++++ +.. ++|....+++|.+ +++.+.+|+.... ...+....++|++||+++.. . .|++|+.||
T Consensus 396 ~L~~~~--g~~-~~~~~~~v~rw~~------a~p~~~~g~~~~~~~~~~~l~~~~~~l~l~G~~~~G--~-gv~~a~~sg 463 (477)
T 3nks_A 396 AAATQL--GLK-EMPSHCLVHLHKN------CIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYEG--V-AVNDCIESG 463 (477)
T ss_dssp HHHHHH--CCC-SCCSEEEEEEEEE------EEECCBTTHHHHHHHHHHHHHHTTCSEEECSTTTSC--C-SHHHHHHHH
T ss_pred HHHHHh--CCC-CCCcEEEEEEcCC------ccCCCCCCHHHHHHHHHHHHHhcCCCEEEEccCCCC--C-cHHHHHHHH
Confidence 999999 543 4677888889975 4555566654221 12233233689999999754 3 499999999
Q ss_pred HHHHHHHHHH
Q 021822 288 INTANALIKC 297 (307)
Q Consensus 288 ~~aA~~il~~ 297 (307)
+++|++|+.+
T Consensus 464 ~~aA~~il~~ 473 (477)
T 3nks_A 464 RQAAVSVLGT 473 (477)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhc
Confidence 9999999874
No 19
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.89 E-value=1.8e-22 Score=185.64 Aligned_cols=256 Identities=14% Similarity=0.122 Sum_probs=176.1
Q ss_pred ccccCcccccccccCCcccc-ccccCCCceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEE-
Q 021822 10 FEEAEPTRISSLKNTFPRQL-MEDFGEDSYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVI- 87 (307)
Q Consensus 10 ~~~~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~- 87 (307)
..++.+++++|...+.+... +..++ ..++. +||++.|+++|++.+++ .|++|+++++|++|..+++++.
T Consensus 161 ~~~~~~~~~~s~~~~~~~~~~~~~~~-~~~~~--~gG~~~l~~~l~~~~~~------~G~~i~~~~~V~~i~~~~~~~~g 231 (425)
T 3ka7_A 161 WALSLKSDEVPVEEVFEIIENMYRFG-GTGIP--EGGCKGIIDALETVISA------NGGKIHTGQEVSKILIENGKAAG 231 (425)
T ss_dssp HHHSSCGGGSBHHHHHHHHHHHHHHC-SCEEE--TTSHHHHHHHHHHHHHH------TTCEEECSCCEEEEEEETTEEEE
T ss_pred HHhCCCcccchHHHHHHHHHHHHhcC-Ccccc--CCCHHHHHHHHHHHHHH------cCCEEEECCceeEEEEECCEEEE
Confidence 34788999999876653321 12223 34454 89999999999999987 5999999999999999888876
Q ss_pred EEeCCCcEEEcCEEEEecChhhhccCcccccCCC--CHHHHHHHhhcCCCcceEEEEEcCCCCcCCCCCcceEEeecCCC
Q 021822 88 ITTEDGSVYHANYVIVTVSVGVLQSDLIGFVPRL--PLWKKLAINNFDMAIYTKIFMKFPYKFWPTGPGTEFLLYAHETR 165 (307)
Q Consensus 88 V~~~~G~~~~ad~VI~a~P~~~l~~~~i~~~p~l--~~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~ 165 (307)
|++ +|+++.||.||+|+|+..+.++ +.-.+.+ ++...+.++++.+.+.+++.+.++++++.. ..+ .+.++..
T Consensus 232 v~~-~g~~~~ad~VV~a~~~~~~~~l-l~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~---~~~-~~~~~~~ 305 (425)
T 3ka7_A 232 IIA-DDRIHDADLVISNLGHAATAVL-CSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVGH---TGV-LLTPYTR 305 (425)
T ss_dssp EEE-TTEEEECSEEEECSCHHHHHHH-TTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSSCS---SSE-EECCSSS
T ss_pred EEE-CCEEEECCEEEECCCHHHHHHh-cCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCccCc---CEE-EECCChh
Confidence 766 4778999999999999988762 2212223 677778889999999999999999887643 122 2332222
Q ss_pred Ccee-eeee-c--cccCCCCceEEEEecchhhHHHhhCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEecccCcCCCCCC
Q 021822 166 GYFT-IWQH-L--ENELPGENMIFVTVTDEESRRIEQQSEKKTKAEIMQVLKKMFGNGKQIPEPDTMLIPKWWSNRLYKG 241 (307)
Q Consensus 166 ~~~~-~~~~-~--~~~~~g~~~l~~~~~~~~a~~~~~~~~e~~~~~~~~~L~~~~p~g~~~~~~~~~~~~~W~~~~~~~g 241 (307)
.+.. .+.+ . +.+|+|+.++.+++...+. ..+. .+++.+.++++|++++| +. .+....+++|..
T Consensus 306 ~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~~--~~~~-~~~~~~~~~~~l~~~~p-~~---~~~~~~v~~~~~------ 372 (425)
T 3ka7_A 306 RINGVNEVTQADPELAPPGKHLTMCHQYVAPE--NVKN-LESEIEMGLEDLKEIFP-GK---RYEVLLIQSYHD------ 372 (425)
T ss_dssp SEEEEECGGGTCGGGSCTTCEEEEEEEEECGG--GGGG-HHHHHHHHHHHHHHHST-TC---CEEEEEEEEEBT------
T ss_pred hcceEEeccCCCCCcCCCCCeEEEEEeccccc--cccc-hHHHHHHHHHHHHHhCC-CC---ceEEEEEEEECC------
Confidence 2211 1111 1 2357788887766543221 1112 24557999999999998 62 233346677864
Q ss_pred cCCCCCCCCChhhhhHhhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHH
Q 021822 242 SYSNWPNGYTLHSYHDLQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALI 295 (307)
Q Consensus 242 ~y~~~~~g~~~~~~~~~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il 295 (307)
+++.+.+++. ..+....|.+|||+|||++.+.+...||+|+.||++||++|+
T Consensus 373 ~~P~~~~~~~--~~~~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 373 EWPVNRAASG--TDPGNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVL 424 (425)
T ss_dssp TBCSBSSCTT--CCCCSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC--
T ss_pred CccccccccC--CCCCCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHhh
Confidence 3333445532 235566778899999999998654579999999999999987
No 20
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.83 E-value=6.3e-20 Score=172.21 Aligned_cols=250 Identities=14% Similarity=0.117 Sum_probs=129.2
Q ss_pred CCCceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEE-EEeCCCcEEEcCEEEEecChhhhcc
Q 021822 34 GEDSYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVI-ITTEDGSVYHANYVIVTVSVGVLQS 112 (307)
Q Consensus 34 ~~~~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~a~P~~~l~~ 112 (307)
..+.|++ +|||++|+++|++.+++ .|++|++|++|++|..++++++ |++.+|+++.||+||+++++..+.+
T Consensus 210 ~~G~~~p--~GG~~~l~~aL~~~~~~------~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~ 281 (501)
T 4dgk_A 210 EWGVWFP--RGGTGALVQGMIKLFQD------LGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYR 281 (501)
T ss_dssp CCCEEEE--TTHHHHHHHHHHHHHHH------TTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC------
T ss_pred cCCeEEe--CCCCcchHHHHHHHHHH------hCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHH
Confidence 4456776 89999999999999988 6999999999999999999875 9999999999999999998887654
Q ss_pred CcccccCCCCHHHHHHHhhcCCC-cceEEEEEcCCCCcCCCCCcceEEeecC------------CCCce-eeeee----c
Q 021822 113 DLIGFVPRLPLWKKLAINNFDMA-IYTKIFMKFPYKFWPTGPGTEFLLYAHE------------TRGYF-TIWQH----L 174 (307)
Q Consensus 113 ~~i~~~p~l~~~~~~~i~~~~~~-~~~kv~l~~~~~~w~~~~~~~~~~~~~~------------~~~~~-~~~~~----~ 174 (307)
.++.- ..++......+++..+. +.+++++.++.+.... ..+.+.+.+. ..+-. .++.. .
T Consensus 282 ~Ll~~-~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~l--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~ 358 (501)
T 4dgk_A 282 DLLSQ-HPAAVKQSNKLQTKRMSNSLFVLYFGLNHHHDQL--AHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVT 358 (501)
T ss_dssp ----------------------CCEEEEEEEEESSCCTTS--CSEEEEEECC-------------CCCEEEEEEECGGGT
T ss_pred Hhccc-cccchhhhhhhhccccCCceeEEEecccCCcccc--ccceeccccchhhhccccccccccccCCceecccCCCC
Confidence 33221 12333344556666664 4667788887654221 1111111110 00000 11111 1
Q ss_pred c--ccCCCCceEEEEecchh----hHHHhhCCHHHHHHHHHHHHHHHh-CCCCCCCCCceE----EecccCcCCCC-CCc
Q 021822 175 E--NELPGENMIFVTVTDEE----SRRIEQQSEKKTKAEIMQVLKKMF-GNGKQIPEPDTM----LIPKWWSNRLY-KGS 242 (307)
Q Consensus 175 ~--~~~~g~~~l~~~~~~~~----a~~~~~~~~e~~~~~~~~~L~~~~-p~g~~~~~~~~~----~~~~W~~~~~~-~g~ 242 (307)
| ..|+|+..+++++..+. ...|.. ..+++.+.+++.|.+.+ | ++. +.+.. ....|.+.... .|+
T Consensus 359 dp~~ap~G~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~vl~~l~~~~~P-~~~--~~i~~~~~~tP~~~~~~~~~~~G~ 434 (501)
T 4dgk_A 359 DSSLAPEGCGSYYVLAPVPHLGTANLDWTV-EGPKLRDRIFAYLEQHYMP-GLR--SQLVTHRMFTPFDFRDQLNAYHGS 434 (501)
T ss_dssp CGGGSSTTCEEEEEEEEECCTTTSCCCHHH-HHHHHHHHHHHHHHHHTCT-THH--HHEEEEEEECTTTTC---------
T ss_pred CCCcCCCCCceEEEEEecCccccccccHHH-HHHHHHHHHHHHHHHhhCC-ChH--HceEEEEECCHHHHHHHcCCCCcc
Confidence 2 25678777766543111 111221 24577888888888754 5 431 11111 11234332222 343
Q ss_pred -CCCC-CCCCChhhhhH-hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHhh
Q 021822 243 -YSNW-PNGYTLHSYHD-LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLKH 300 (307)
Q Consensus 243 -y~~~-~~g~~~~~~~~-~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~~ 300 (307)
|... .+.+....+|. ..+|++|||+||++++++ +.++||+.||+.||+.||++|.+
T Consensus 435 ~~g~~~~~~q~~~~RP~~~~t~i~gLyl~G~~t~pG--~Gv~ga~~SG~~aA~~il~dL~g 493 (501)
T 4dgk_A 435 AFSVEPVLTQSAWFRPHNRDKTITNLYLVGAGTHPG--AGIPGVIGSAKATAGLMLEDLIG 493 (501)
T ss_dssp ---------------------CCTTEEECCCH--------HHHHHHHHHHHHHHHHHHHC-
T ss_pred ccChhcchhhccccCCCCCCCCCCCEEEECCCCCCc--ccHHHHHHHHHHHHHHHHHHhcC
Confidence 2211 11121112333 346789999999999874 56999999999999999999876
No 21
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.83 E-value=2.4e-19 Score=164.69 Aligned_cols=242 Identities=14% Similarity=0.106 Sum_probs=161.5
Q ss_pred cccCcccccccccCCcccc-ccccCCCceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEE
Q 021822 11 EEAEPTRISSLKNTFPRQL-MEDFGEDSYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIIT 89 (307)
Q Consensus 11 ~~~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~ 89 (307)
.++.+++++|...+.+... +..++ +.++. +||++.|+++|++.+++ .|++|+++++|++|+.+++++ |.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~--~gG~~~l~~~l~~~~~~------~G~~i~~~~~V~~i~~~~~~v-V~ 224 (421)
T 3nrn_A 155 ADSVSLSDLTALELAKEIRAALRWG-GPGLI--RGGCKAVIDELERIIME------NKGKILTRKEVVEINIEEKKV-YT 224 (421)
T ss_dssp HHSSCGGGSBHHHHHHHHHHHHHHC-SCEEE--TTCHHHHHHHHHHHHHT------TTCEEESSCCEEEEETTTTEE-EE
T ss_pred hcCCCcccCCHHHHHHHHHHHhhcC-Cccee--cCCHHHHHHHHHHHHHH------CCCEEEcCCeEEEEEEECCEE-EE
Confidence 3678888888866653321 12223 34554 89999999999999987 599999999999999988888 74
Q ss_pred eCCCcEEEcCEEEEecChhhhccCcccccCCCCHHHHHHHhhcCCCcceEEEEEcCCCCcCCCCCcceEEeecCCCCcee
Q 021822 90 TEDGSVYHANYVIVTVSVGVLQSDLIGFVPRLPLWKKLAINNFDMAIYTKIFMKFPYKFWPTGPGTEFLLYAHETRGYFT 169 (307)
Q Consensus 90 ~~~G~~~~ad~VI~a~P~~~l~~~~i~~~p~l~~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~ 169 (307)
.+|+++.||.||+|+|+..+.++ +. .+.+++...+.++++.+.+.+++.+.++++.... ..+ .+.++.. +..
T Consensus 225 -~~g~~~~ad~Vv~a~~~~~~~~l-l~-~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~---~~~-~~~~~~~-~~~ 296 (421)
T 3nrn_A 225 -RDNEEYSFDVAISNVGVRETVKL-IG-RDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPRIG---NTI-VFTPGLM-ING 296 (421)
T ss_dssp -TTCCEEECSEEEECSCHHHHHHH-HC-GGGSCHHHHHHHHTCCCCCEEEEEEEEESSCSSC---SSE-EECTTSS-SCE
T ss_pred -eCCcEEEeCEEEECCCHHHHHHh-cC-cccCCHHHHHHHhCCCCCceEEEEEEEcCCcccC---CeE-EEcCCcc-eee
Confidence 56778999999999999988762 11 1347777778889999999999999998875332 223 3333222 222
Q ss_pred eeee--cc--ccCCCCceEEEEecchhhHHHhhCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEecccCcCCCCCCcCCC
Q 021822 170 IWQH--LE--NELPGENMIFVTVTDEESRRIEQQSEKKTKAEIMQVLKKMFGNGKQIPEPDTMLIPKWWSNRLYKGSYSN 245 (307)
Q Consensus 170 ~~~~--~~--~~~~g~~~l~~~~~~~~a~~~~~~~~e~~~~~~~~~L~~~~p~g~~~~~~~~~~~~~W~~~~~~~g~y~~ 245 (307)
+... .+ ..|+|+.++.++.... ..+.++..+.++++|.+++| . ......++|.. +++.
T Consensus 297 i~~~s~~~p~~ap~G~~~~~~~~~~~------~~~~~~~~~~~~~~L~~~~p-~-----~~~~~~~~~~~------~~p~ 358 (421)
T 3nrn_A 297 FNEPSALDKSLAREGYTLIMAHMALK------NGNVKKAIEKGWEELLEIFP-E-----GEPLLAQVYRD------GNPV 358 (421)
T ss_dssp EECGGGTCGGGSCTTEEEEEEEEECT------TCCHHHHHHHHHHHHHHHCT-T-----CEEEEEEEC------------
T ss_pred EeccCCCCCCcCCCCceEEEEEEeec------cccHHHHHHHHHHHHHHHcC-C-----CeEEEeeeccC------CCCc
Confidence 2111 12 2456777766654211 12334668999999999995 2 22234566753 2221
Q ss_pred C--CCCCChhhhhHhhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHH
Q 021822 246 W--PNGYTLHSYHDLQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANAL 294 (307)
Q Consensus 246 ~--~~g~~~~~~~~~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~i 294 (307)
. .++.. .+ ..| ++||+|||++.+.+.-.||||+.||++||++|
T Consensus 359 ~~~~~~~~---~~--~~~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 359 NRTRAGLH---IE--WPL-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp -------C---CC--CCC-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred ccccCCCC---CC--CCC-CcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 1 22221 22 456 89999999998742225699999999999998
No 22
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.81 E-value=7e-18 Score=149.99 Aligned_cols=226 Identities=13% Similarity=0.169 Sum_probs=162.0
Q ss_pred eeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEE-EcCEEEEecChhhhccCccc
Q 021822 38 YFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVY-HANYVIVTVSVGVLQSDLIG 116 (307)
Q Consensus 38 ~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~-~ad~VI~a~P~~~l~~~~i~ 116 (307)
.+.. ..|+..|.++|++.+ +|+++++|++|+.++++|.|++.+|+.. .||.||+|+|+..+.+
T Consensus 102 ~~~~-~~~~~~l~~~l~~g~-----------~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~---- 165 (336)
T 1yvv_A 102 RWVG-KPGMSAITRAMRGDM-----------PVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIATPAPQAST---- 165 (336)
T ss_dssp EEEE-SSCTHHHHHHHHTTC-----------CEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEECSCHHHHGG----
T ss_pred cEEc-CccHHHHHHHHHccC-----------cEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEcCCHHHHHH----
Confidence 3444 689999999998754 6999999999999989999999999766 4999999999998876
Q ss_pred ccCCCCHHHHHHHhhcCCCcceEEEEEcCCCCcCCCCCcceEEeecCCCCceeeeeeccccC--CCC-ceEEEEecchhh
Q 021822 117 FVPRLPLWKKLAINNFDMAIYTKIFMKFPYKFWPTGPGTEFLLYAHETRGYFTIWQHLENEL--PGE-NMIFVTVTDEES 193 (307)
Q Consensus 117 ~~p~l~~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~-~~l~~~~~~~~a 193 (307)
+.+. .+.....+..+.|.++.++.+.|++++|..- ..+... +.+...++... ..+ .+. ..++++..++++
T Consensus 166 ~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~l~~~~-~~p~~~~~~~~~v~~~~~~~~ 238 (336)
T 1yvv_A 166 LLAA-APKLASVVAGVKMDPTWAVALAFETPLQTPM---QGCFVQ--DSPLDWLARNR-SKPERDDTLDTWILHATSQWS 238 (336)
T ss_dssp GGTT-CHHHHHHHTTCCEEEEEEEEEEESSCCSCCC---CEEEEC--SSSEEEEEEGG-GSTTCCCSSEEEEEEECHHHH
T ss_pred hhcc-CHHHHHHHhhcCccceeEEEEEecCCCCCCC---CeEEeC--CCceeEEEecC-cCCCCCCCCcEEEEEeCHHHH
Confidence 2222 2345677889999999999999999887641 112222 22222232211 111 111 345556666777
Q ss_pred HHHhhCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEecccCcCCCCCCcCCCCCCCCChhhhhHhhCCCCcEEEeccccc
Q 021822 194 RRIEQQSEKKTKAEIMQVLKKMFGNGKQIPEPDTMLIPKWWSNRLYKGSYSNWPNGYTLHSYHDLQQPFGRIYFAGEHTN 273 (307)
Q Consensus 194 ~~~~~~~~e~~~~~~~~~L~~~~p~g~~~~~~~~~~~~~W~~~~~~~g~y~~~~~g~~~~~~~~~~~p~~~l~~aGd~~~ 273 (307)
+.+.+++++++.+.+++.|.+++ |.+.+.|.....++|.. ..+.|. .+. .....+.++|+||||+++
T Consensus 239 ~~~~~~~~~~~~~~l~~~l~~~l--g~~~~~p~~~~~~rw~~---a~~~~~---~~~-----~~~~~~~~rl~laGDa~~ 305 (336)
T 1yvv_A 239 RQNLDASREQVIEHLHGAFAELI--DCTMPAPVFSLAHRWLY---ARPAGA---HEW-----GALSDADLGIYVCGDWCL 305 (336)
T ss_dssp HHTTTSCHHHHHHHHHHHHHTTC--SSCCCCCSEEEEEEEEE---EEESSC---CCC-----SCEEETTTTEEECCGGGT
T ss_pred HHHHhCCHHHHHHHHHHHHHHHh--CCCCCCCcEEEccccCc---cCCCCC---CCC-----CeeecCCCCEEEEecCCC
Confidence 77888999999999999999999 55566677778889963 112221 111 112234579999999997
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHhhhh
Q 021822 274 STYLGYVDGAYFSGINTANALIKCLKHFC 302 (307)
Q Consensus 274 ~~~~g~~egAv~SG~~aA~~il~~l~~~~ 302 (307)
. +++|+|++||.++|+.|++.+.++-
T Consensus 306 g---~gv~~a~~sg~~lA~~l~~~~~~~~ 331 (336)
T 1yvv_A 306 S---GRVEGAWLSGQEAARRLLEHLQLEH 331 (336)
T ss_dssp T---SSHHHHHHHHHHHHHHHHHHTTC--
T ss_pred C---CCHHHHHHHHHHHHHHHHHHhhhhh
Confidence 5 5799999999999999999987753
No 23
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.80 E-value=9e-20 Score=147.95 Aligned_cols=131 Identities=16% Similarity=0.189 Sum_probs=107.1
Q ss_pred Cceeeeeecccc-CCCC-ceEEEEecchhhHHHhhCCHHHHHHHHHHHHHHHhCCCCCCCCCc-eE--EecccCcCCCCC
Q 021822 166 GYFTIWQHLENE-LPGE-NMIFVTVTDEESRRIEQQSEKKTKAEIMQVLKKMFGNGKQIPEPD-TM--LIPKWWSNRLYK 240 (307)
Q Consensus 166 ~~~~~~~~~~~~-~~g~-~~l~~~~~~~~a~~~~~~~~e~~~~~~~~~L~~~~p~g~~~~~~~-~~--~~~~W~~~~~~~ 240 (307)
++..+|+..... ++++ .+|++|+.++.+..+..++++++++.++++|+++| |.++ .+. .+ ..++|..+||+.
T Consensus 19 pi~~i~d~S~~~~~~g~~~~L~~~~~g~~A~~~~~l~~~e~~~~~l~~L~~~~--g~~~-~~~~~~~~~~~~W~~dp~~~ 95 (181)
T 2e1m_C 19 PNRFMYYPSHPVPGTQGGVVLAAYSWSDDAARWDSFDDAERYGYALENLQSVH--GRRI-EVFYTGAGQTQSWLRDPYAC 95 (181)
T ss_dssp TTBEEECCSSCCTTCSCEEEEEEEEEHHHHHHHTTSCTTTTHHHHHHHHHHHH--CGGG-GGTEEEEEEEEESSSCTTTS
T ss_pred CeEEEEECCCCcCCCCCCEEEEEEcCChHHHHHHcCCHHHHHHHHHHHHHHHh--CCCc-HhhccCcceecccCCCCCCC
Confidence 444455432221 2344 47778888888888989999999999999999999 4444 444 56 889999999999
Q ss_pred CcCCCCCCCCChhhhhHhhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHhh
Q 021822 241 GSYSNWPNGYTLHSYHDLQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLKH 300 (307)
Q Consensus 241 g~y~~~~~g~~~~~~~~~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~~ 300 (307)
|+|+.+.||....+.+.+.+|.++|||||++++. ++|||+||++||+|||++|++.+..
T Consensus 96 Ga~s~~~pg~~~~~~~~l~~p~grl~FAGe~ts~-~~g~~eGAl~SG~raA~~i~~~l~~ 154 (181)
T 2e1m_C 96 GEAAVYTPHQMTAFHLDVVRPEGPVYFAGEHVSL-KHAWIEGAVETAVRAAIAVNEAPVG 154 (181)
T ss_dssp SSEECCCTTHHHHHHHHHHSCBTTEEECSGGGTT-STTSHHHHHHHHHHHHHHHHTCCC-
T ss_pred CcccCcCCCchHHHHHHHhCCCCcEEEEEHHHcC-CccCHHHHHHHHHHHHHHHHHHhcc
Confidence 9999888998766678899999999999999997 8999999999999999999987765
No 24
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.79 E-value=2.6e-18 Score=160.61 Aligned_cols=262 Identities=14% Similarity=0.086 Sum_probs=173.4
Q ss_pred ccccCcccccccccCCccccc-------c-----c----cCC-CceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeec
Q 021822 10 FEEAEPTRISSLKNTFPRQLM-------E-----D----FGE-DSYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKL 72 (307)
Q Consensus 10 ~~~~~~~~~~s~~~~~~~~~~-------~-----~----~~~-~~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l 72 (307)
-.||.+++++|+.++.++... . . ++. ..+..+.+||+++|+++|++.+.+ .+|++
T Consensus 162 ~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~gG~~~l~~~la~~l~~--------~~i~~ 233 (484)
T 4dsg_A 162 KVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRGGTGIIYQAIKEKLPS--------EKLTF 233 (484)
T ss_dssp HHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSSCTHHHHHHHHHHSCG--------GGEEE
T ss_pred hhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCCCHHHHHHHHHhhhhh--------CeEEE
Confidence 457999999999876643321 0 0 001 122223369999999999999852 37999
Q ss_pred C--CeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChhhhccCcccccCCCCHHHHHHHhhcCCCcceEEEEEcCCCCcC
Q 021822 73 K--KTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVGVLQSDLIGFVPRLPLWKKLAINNFDMAIYTKIFMKFPYKFWP 150 (307)
Q Consensus 73 ~--~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~~l~~~~i~~~p~l~~~~~~~i~~~~~~~~~kv~l~~~~~~w~ 150 (307)
+ ++|++|+.++++|. +.+|+++.||+||+|+|++.+.+++....+++++...+.+..+.|.++.+|.+.|+.+...
T Consensus 234 ~~~~~V~~I~~~~~~v~--~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~ 311 (484)
T 4dsg_A 234 NSGFQAIAIDADAKTIT--FSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNVIGIGVKGTPPP 311 (484)
T ss_dssp CGGGCEEEEETTTTEEE--ETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEEEEEEEESCCCG
T ss_pred CCCceeEEEEecCCEEE--ECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEEEEEEEcCCCcc
Confidence 9 56999998887664 4788889999999999999987632111234777788889999999999999999876321
Q ss_pred CCCCcceEEeecC-CCCcee--eeeecc--ccCCCCceEEEEecchhhHHHhhCCHHHHHHHHHHHHHHHhCCCCCCCCC
Q 021822 151 TGPGTEFLLYAHE-TRGYFT--IWQHLE--NELPGENMIFVTVTDEESRRIEQQSEKKTKAEIMQVLKKMFGNGKQIPEP 225 (307)
Q Consensus 151 ~~~~~~~~~~~~~-~~~~~~--~~~~~~--~~~~g~~~l~~~~~~~~a~~~~~~~~e~~~~~~~~~L~~~~p~g~~~~~~ 225 (307)
+-++.. +++-++ +.++.. .+.+.+ ..++++.++++.+... .....+++++.+.++++|.++. +.+-.++
T Consensus 312 ~~~~~~-~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~---~~~~~~d~~l~~~a~~~L~~~~--~~~~~~~ 385 (484)
T 4dsg_A 312 HLKTAC-WLYFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSES---KYKPVNHSTLIEDCIVGCLASN--LLLPEDL 385 (484)
T ss_dssp GGTTCC-EEECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEB---TTBCCCTTSHHHHHHHHHHHTT--SCCTTCC
T ss_pred cCCCCe-EEEEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecC---cCCcCCHHHHHHHHHHHHHHcC--CCCccce
Confidence 101122 233332 222211 122222 2355666776665432 2446789999999999999986 4432233
Q ss_pred c-eEEecccCcCCCCCCcCCCCCCCCChh---hhhHhhCCCCcEEEecccccCCCC-cchhHHHHHHHHHHHHHH
Q 021822 226 D-TMLIPKWWSNRLYKGSYSNWPNGYTLH---SYHDLQQPFGRIYFAGEHTNSTYL-GYVDGAYFSGINTANALI 295 (307)
Q Consensus 226 ~-~~~~~~W~~~~~~~g~y~~~~~g~~~~---~~~~~~~p~~~l~~aGd~~~~~~~-g~~egAv~SG~~aA~~il 295 (307)
+ ...+++|.. +|+.+.+++... ....+.. . +|+++|..-...|. +.|++|+.||++||++|+
T Consensus 386 ~~~~~v~r~~~------~yP~y~~~~~~~~~~~~~~l~~-~-~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 386 LVSKWHYRIEK------GYPTPFIGRNNLLEKAQPELMS-R-CIYSRGRFGAWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp EEEEEEEEEEE------EEECCBTTHHHHHHHHHHHHHH-T-TEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEEeCc------cccCCCccHHHHHHHHHHHHHh-C-CcEeecCCcccccCCCChHHHHHHHHHHHHHHH
Confidence 2 335677864 677667775422 2233332 3 89999997655331 359999999999999998
No 25
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.78 E-value=2e-18 Score=162.26 Aligned_cols=262 Identities=15% Similarity=0.103 Sum_probs=169.0
Q ss_pred cccCcccccccccCCccccc----------------cccC-CCceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecC
Q 021822 11 EEAEPTRISSLKNTFPRQLM----------------EDFG-EDSYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLK 73 (307)
Q Consensus 11 ~~~~~~~~~s~~~~~~~~~~----------------~~~~-~~~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~ 73 (307)
.++.+++++|..+..++... ..++ ....+.+.+||+++|+++|++.+.+ .|++|++|
T Consensus 169 ~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~------~g~~i~~~ 242 (513)
T 4gde_A 169 VWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANTLPK------EKTRFGEK 242 (513)
T ss_dssp HHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEESSSHHHHHHHHHHHTSCG------GGEEESGG
T ss_pred hccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecccCCHHHHHHHHHHHHHh------cCeeeecc
Confidence 46788899988766533210 0011 1122233379999999999999987 48999999
Q ss_pred CeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChhhhccCcccccCCCCHHHHHHHhhcCCCcceEEEEEcCCCCcCCCC
Q 021822 74 KTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVGVLQSDLIGFVPRLPLWKKLAINNFDMAIYTKIFMKFPYKFWPTGP 153 (307)
Q Consensus 74 ~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~~l~~~~i~~~p~l~~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~ 153 (307)
++|++|..+++++ ++.+|+++.||+||+|+|++.|.++ .+ ++....+...+.|.+...|.+.++........
T Consensus 243 ~~V~~I~~~~~~v--~~~~G~~~~ad~vI~t~P~~~l~~~----l~--~~~~~~~~~~l~y~~~~~v~l~~~~~~~~~~~ 314 (513)
T 4gde_A 243 GKVTKVNANNKTV--TLQDGTTIGYKKLVSTMAVDFLAEA----MN--DQELVGLTKQLFYSSTHVIGVGVRGSRPERIG 314 (513)
T ss_dssp GCEEEEETTTTEE--EETTSCEEEEEEEEECSCHHHHHHH----TT--CHHHHHHHTTCCEEEEEEEEEEEESSCCTTTT
T ss_pred eEEEEEEccCCEE--EEcCCCEEECCEEEECCCHHHHHHh----cC--chhhHhhhhcccCCceEEEEEEEecccccccc
Confidence 9999999887654 4678999999999999999999762 12 23445677889999999999988765433211
Q ss_pred CcceEEeecCC-CCceeee--eec------------------cc-----cCCCCceEEEEecchhhHHHhhCCHHHHHHH
Q 021822 154 GTEFLLYAHET-RGYFTIW--QHL------------------EN-----ELPGENMIFVTVTDEESRRIEQQSEKKTKAE 207 (307)
Q Consensus 154 ~~~~~~~~~~~-~~~~~~~--~~~------------------~~-----~~~g~~~l~~~~~~~~a~~~~~~~~e~~~~~ 207 (307)
+. .+++.+.+ .++..+. .++ +. .+.+...+..++.+.....+..+++|++.+.
T Consensus 315 ~~-~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~de~l~~~ 393 (513)
T 4gde_A 315 DK-CWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILAD 393 (513)
T ss_dssp TC-CEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSCCSEECCCEEEEEEEEEEBTTBCCCTTTHHHH
T ss_pred cc-ceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCCCcccccCCcceEEEEEecccchhccCCCHHHHHHH
Confidence 11 22332221 1111110 000 00 1112233334433322334567899999999
Q ss_pred HHHHHHHHhCCCCCCCCCceEEecccCcCCCCCCcCCCCCCCCChh---hhhHhhCCCCcEEEecccccCCCC-cchhHH
Q 021822 208 IMQVLKKMFGNGKQIPEPDTMLIPKWWSNRLYKGSYSNWPNGYTLH---SYHDLQQPFGRIYFAGEHTNSTYL-GYVDGA 283 (307)
Q Consensus 208 ~~~~L~~~~p~g~~~~~~~~~~~~~W~~~~~~~g~y~~~~~g~~~~---~~~~~~~p~~~l~~aGd~~~~~~~-g~~egA 283 (307)
++++|.++.+ -...+++....+.+|.+ +|+.+..|+... ..+.+.. +|||++|-.-...|. ++|++|
T Consensus 394 ~~~~L~~~~~-i~~~~~i~~~~v~r~~~------ayP~y~~~~~~~~~~~~~~l~~--~~l~~~GR~g~~~Y~~~n~D~a 464 (513)
T 4gde_A 394 CIQGLVNTEM-LKPTDEIVSTYHRRFDH------GYPTPTLEREGTLTQILPKLQD--KDIWSRGRFGSWRYEVGNQDHS 464 (513)
T ss_dssp HHHHHHHTTS-SCTTCEEEEEEEEEEEE------EEECCBTTHHHHHHHHHHHHHH--TTEEECSTTTTCCGGGCSHHHH
T ss_pred HHHHHHHhcC-CCCccceEEEEEEECCC------eecccCHhHHHHHHHHHHHHhh--cCcEEecCCcccCcCCCCHHHH
Confidence 9999999884 22222345566778865 466555665322 2333443 489999976555553 689999
Q ss_pred HHHHHHHHHHHHH
Q 021822 284 YFSGINTANALIK 296 (307)
Q Consensus 284 v~SG~~aA~~il~ 296 (307)
+.||..||+.|+.
T Consensus 465 ~~~g~~aa~~I~~ 477 (513)
T 4gde_A 465 FMLGVEAVDNIVN 477 (513)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc
Confidence 9999999999996
No 26
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.66 E-value=1.1e-15 Score=140.38 Aligned_cols=223 Identities=11% Similarity=0.129 Sum_probs=136.4
Q ss_pred CCceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChhhhccCc
Q 021822 35 EDSYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVGVLQSDL 114 (307)
Q Consensus 35 ~~~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~~l~~~~ 114 (307)
+..+.+ +||+++++++|++.+ +.+|++|++|++|..+++++.|++.+| ++.||+||+|+|+..+.+
T Consensus 196 ~~~~~~--~~g~~~l~~~l~~~l---------~~~v~~~~~V~~i~~~~~~v~v~~~~g-~~~ad~Vv~a~~~~~~~~-- 261 (424)
T 2b9w_A 196 GDLWTW--ADGTQAMFEHLNATL---------EHPAERNVDITRITREDGKVHIHTTDW-DRESDVLVLTVPLEKFLD-- 261 (424)
T ss_dssp TCCBCC--TTCHHHHHHHHHHHS---------SSCCBCSCCEEEEECCTTCEEEEESSC-EEEESEEEECSCHHHHTT--
T ss_pred CceEEe--CChHHHHHHHHHHhh---------cceEEcCCEEEEEEEECCEEEEEECCC-eEEcCEEEECCCHHHHhh--
Confidence 345554 799999999999997 558999999999999888899998888 489999999999998855
Q ss_pred ccccCCCCHHHHHHHhhcCCCcceEEEEEcCCCCcCCCCCcceEEeecC---CCCceeeeeeccccCCC-CceEEEEecc
Q 021822 115 IGFVPRLPLWKKLAINNFDMAIYTKIFMKFPYKFWPTGPGTEFLLYAHE---TRGYFTIWQHLENELPG-ENMIFVTVTD 190 (307)
Q Consensus 115 i~~~p~l~~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g-~~~l~~~~~~ 190 (307)
+.|+++.. +..+.++.+.+.. +.+.+...++. ...+..... ..+ ..+|... ..+.+ ..++++|+.+
T Consensus 262 --~l~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~g-~~~~~~~-~~~~~~~~~l~~~~~~ 331 (424)
T 2b9w_A 262 --YSDADDDE-REYFSKIIHQQYM-VDACLVKEYPT----ISGYVPDNMRPERLG-HVMVYYH-RWADDPHQIITTYLLR 331 (424)
T ss_dssp --SBCCCHHH-HHHHTTCEEEEEE-EEEEEESSCCS----SEEECGGGGSGGGTT-SCCEEEE-CCTTCTTSCEEEEEEC
T ss_pred --ccCCCHHH-HHHHhcCCcceeE-EEEEEeccCCc----ccccccCCCCCcCCC-cceEEee-ecCCCCceEEEEEecc
Confidence 33444433 3456777776533 22222222211 111111110 111 1122211 11223 3566777654
Q ss_pred hhhHHHhhCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEecccCcCCCC-CCcCCCCCCCCChhhhhHhhCCCCcEEEec
Q 021822 191 EESRRIEQQSEKKTKAEIMQVLKKMFGNGKQIPEPDTMLIPKWWSNRLY-KGSYSNWPNGYTLHSYHDLQQPFGRIYFAG 269 (307)
Q Consensus 191 ~~a~~~~~~~~e~~~~~~~~~L~~~~p~g~~~~~~~~~~~~~W~~~~~~-~g~y~~~~~g~~~~~~~~~~~p~~~l~~aG 269 (307)
.. ..+.+.+++++.+.+++.|++ + +.+.+++ ....+|...|.. ...| ..|+.. .....++.++|||||
T Consensus 332 ~~-~~~~~~~~~~~~~~v~~~l~~-l--~~~~~~~--~~~~~w~~~p~~~~~~~---~~G~~~--~~~~~~~~~~l~~aG 400 (424)
T 2b9w_A 332 NH-PDYADKTQEECRQMVLDDMET-F--GHPVEKI--IEEQTWYYFPHVSSEDY---KAGWYE--KVEGMQGRRNTFYAG 400 (424)
T ss_dssp CB-TTBCCCCHHHHHHHHHHHHHH-T--TCCEEEE--EEEEEEEEEEECCHHHH---HTTHHH--HHHHTTTGGGEEECS
T ss_pred CC-CcccccChHHHHHHHHHHHHH-c--CCccccc--ccccceeeeeccCHHHH---hccHHH--HHHHHhCCCCceEec
Confidence 32 345567889999999999998 5 3322111 223466532211 0011 112111 111223446999999
Q ss_pred ccccCCCCcchhHHHHHHHHHHHHHH
Q 021822 270 EHTNSTYLGYVDGAYFSGINTANALI 295 (307)
Q Consensus 270 d~~~~~~~g~~egAv~SG~~aA~~il 295 (307)
+++.. |++|+|+.||.+||++|+
T Consensus 401 ~~~~~---g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 401 EIMSF---GNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp GGGSC---SSHHHHHHHHHHHHHHHT
T ss_pred ccccc---ccHHHHHHHHHHHHHHhc
Confidence 98864 789999999999999986
No 27
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.26 E-value=2.2e-13 Score=103.04 Aligned_cols=108 Identities=13% Similarity=0.208 Sum_probs=66.2
Q ss_pred cEEEcCEEEEecChhhhccCcccccCCCCHHHHHHHhhcCCCcceEEEEEcCCCCcCCCCCcceEEeecCCCCceeeeee
Q 021822 94 SVYHANYVIVTVSVGVLQSDLIGFVPRLPLWKKLAINNFDMAIYTKIFMKFPYKFWPTGPGTEFLLYAHETRGYFTIWQH 173 (307)
Q Consensus 94 ~~~~ad~VI~a~P~~~l~~~~i~~~p~l~~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 173 (307)
++++||+||+|+|+.+|++ |.|.|+||+.+.+++++++|+...|+++.|+++||+++ +..+ . .+
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~--I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~-~~~g---d----------~s 67 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRF--VKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWEFT-EADW---K----------RE 67 (130)
T ss_dssp EEEEESEEEECSCHHHHTT--SEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGCC-HHHH---H----------HH
T ss_pred eEEEcCEEEEcCCHHHHhc--CcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCCCC-Cccc---c----------cc
Confidence 3689999999999999997 88999999999999999999999999999999999862 1000 0 00
Q ss_pred ccccCCCCceEEEEe-cchhhHHHhhCCHHHHHHHHHHHHHHHhCCCCC
Q 021822 174 LENELPGENMIFVTV-TDEESRRIEQQSEKKTKAEIMQVLKKMFGNGKQ 221 (307)
Q Consensus 174 ~~~~~~g~~~l~~~~-~~~~a~~~~~~~~e~~~~~~~~~L~~~~p~g~~ 221 (307)
.. ..+.++++.|+ +|+.+.+|..+++ +..+.+++.|..++| +.+
T Consensus 68 ~~--~~~pg~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p-~~~ 112 (130)
T 2e1m_B 68 LD--AIAPGLYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHP-SVD 112 (130)
T ss_dssp HH--HHSTTHHHHHHHHCCCSCCCC------------------------
T ss_pred CC--CCCCeEEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCC-CCc
Confidence 00 11234666677 4777777777776 778888999999999 654
No 28
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.18 E-value=8.3e-12 Score=113.70 Aligned_cols=105 Identities=11% Similarity=0.097 Sum_probs=75.5
Q ss_pred ccccCcccccccccC--Ccc-cccc-ccCCCce--eeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecC
Q 021822 10 FEEAEPTRISSLKNT--FPR-QLME-DFGEDSY--FVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSK 83 (307)
Q Consensus 10 ~~~~~~~~~~s~~~~--~~~-~~~~-~~~~~~~--~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~ 83 (307)
-.++.+++++|+..+ ++. +.++ .+....+ ++ +||+++|+++|++.+ |++|++|++|++|...
T Consensus 164 ~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p--~gG~~~l~~~l~~~~---------g~~I~l~~~V~~I~~~- 231 (399)
T 1v0j_A 164 KQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLP--TDGYTAWLQNMAADH---------RIEVRLNTDWFDVRGQ- 231 (399)
T ss_dssp HHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECB--TTHHHHHHHHHTCST---------TEEEECSCCHHHHHHH-
T ss_pred hhcCCChhhcChHhhhcceeEeccccchhhhhhcccc--cccHHHHHHHHHhcC---------CeEEEECCchhhhhhh-
Confidence 457899999998876 321 1111 1111234 43 899999999999863 7899999999999753
Q ss_pred CeEEEEeCCCcEE-EcCEEEEecChhhhccCcccccCCCCHHHHHHHhhcCCCcceEEEEEcCCCCc
Q 021822 84 NKVIITTEDGSVY-HANYVIVTVSVGVLQSDLIGFVPRLPLWKKLAINNFDMAIYTKIFMKFPYKFW 149 (307)
Q Consensus 84 ~~v~V~~~~G~~~-~ad~VI~a~P~~~l~~~~i~~~p~l~~~~~~~i~~~~~~~~~kv~l~~~~~~w 149 (307)
| + .+ .||+||+|+|++.+.+ + .+..+.|.++..+.+.++.+.+
T Consensus 232 --v-----~--~~~~aD~VI~t~p~~~l~~--~------------~l~~l~y~s~~~~~~~~~~~~~ 275 (399)
T 1v0j_A 232 --L-----R--PGSPAAPVVYTGPLDRYFD--Y------------AEGRLGWRTLDFEVEVLPIGDF 275 (399)
T ss_dssp --H-----T--TTSTTCCEEECSCHHHHTT--T------------TTCCCCEEEEEEEEEEESSSCS
T ss_pred --h-----h--hcccCCEEEECCcHHHHHh--h------------hhCCCCcceEEEEEEEEccccC
Confidence 2 1 34 6999999999998865 1 1357889888888888876543
No 29
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.91 E-value=7.8e-09 Score=93.50 Aligned_cols=98 Identities=7% Similarity=0.071 Sum_probs=71.4
Q ss_pred ccccccCcccccccccCC--cc-cccc-ccCCCce--eeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeE-EEE
Q 021822 8 NDFEEAEPTRISSLKNTF--PR-QLME-DFGEDSY--FVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVR-KIN 80 (307)
Q Consensus 8 ~~~~~~~~~~~~s~~~~~--~~-~~~~-~~~~~~~--~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~-~I~ 80 (307)
+.-.++.+|+++|..... +. +.+. .+..+.| ++ +||+++|+++|++. +|++|++|++|+ +|.
T Consensus 156 ~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p--~gG~~~l~~~l~~~---------~g~~I~l~~~V~~~i~ 224 (384)
T 2bi7_A 156 TIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMP--KCGYTQMIKSILNH---------ENIKVDLQREFIVEER 224 (384)
T ss_dssp HHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEE--TTHHHHHHHHHHCS---------TTEEEEESCCCCGGGG
T ss_pred HHHHhCCCHHHhCHHHHhccccccccccccccccccEEE--CcCHHHHHHHHHhc---------CCCEEEECCeeehhhh
Confidence 344678999999987662 21 1111 2222344 44 89999999999985 378999999999 886
Q ss_pred ecCCeEEEEeCCCcEEEcCEEEEecChhhhccCcccccCCCCHHHHHHHhhcCCCcceEEEEEcC
Q 021822 81 QSKNKVIITTEDGSVYHANYVIVTVSVGVLQSDLIGFVPRLPLWKKLAINNFDMAIYTKIFMKFP 145 (307)
Q Consensus 81 ~~~~~v~V~~~~G~~~~ad~VI~a~P~~~l~~~~i~~~p~l~~~~~~~i~~~~~~~~~kv~l~~~ 145 (307)
. .||+||+|+|++.+.++ .+..+.|.+...+.+.++
T Consensus 225 ~---------------~~d~VI~a~p~~~~~~~--------------~lg~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 225 T---------------HYDHVFYSGPLDAFYGY--------------QYGRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp G---------------GSSEEEECSCHHHHTTT--------------TTCCCCEEEEEEEEEEEE
T ss_pred c---------------cCCEEEEcCCHHHHHHh--------------hcCCCCcceEEEEEEEeC
Confidence 3 28999999999998651 134688988888888886
No 30
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.76 E-value=1.6e-08 Score=90.95 Aligned_cols=104 Identities=11% Similarity=0.098 Sum_probs=73.1
Q ss_pred cccccCcccccccccCC--cc-cccc-ccCCCcee-eeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecC
Q 021822 9 DFEEAEPTRISSLKNTF--PR-QLME-DFGEDSYF-VADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSK 83 (307)
Q Consensus 9 ~~~~~~~~~~~s~~~~~--~~-~~~~-~~~~~~~~-~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~ 83 (307)
.--++.+|+++|+..+. +. +.++ .+....|. .. +||+++|+++|++. ++|++|++|++|...
T Consensus 153 ~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p-~gG~~~l~~~l~~g-----------~~i~l~~~V~~i~~~- 219 (367)
T 1i8t_A 153 EKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIP-VGGYTKLIEKMLEG-----------VDVKLGIDFLKDKDS- 219 (367)
T ss_dssp HHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECB-TTCHHHHHHHHHTT-----------SEEECSCCGGGSHHH-
T ss_pred hhhhCCChHHcCHHHHhhceeeeccccccccchhhccc-CCCHHHHHHHHhcC-----------CEEEeCCceeeechh-
Confidence 34578999999987762 21 1111 12223442 23 89999999999974 379999999988632
Q ss_pred CeEEEEeCCCcEEEcCEEEEecChhhhccCcccccCCCCHHHHHHHhhcCCCcceEEEEEcCCCCc
Q 021822 84 NKVIITTEDGSVYHANYVIVTVSVGVLQSDLIGFVPRLPLWKKLAINNFDMAIYTKIFMKFPYKFW 149 (307)
Q Consensus 84 ~~v~V~~~~G~~~~ad~VI~a~P~~~l~~~~i~~~p~l~~~~~~~i~~~~~~~~~kv~l~~~~~~w 149 (307)
| ...||+||+|+|++.+.+. .+.++.|.+...+.+.++.+..
T Consensus 220 --v--------~~~~D~VV~a~p~~~~~~~--------------~l~~l~y~s~~~v~~~~d~~~~ 261 (367)
T 1i8t_A 220 --L--------ASKAHRIIYTGPIDQYFDY--------------RFGALEYRSLKFETERHEFPNF 261 (367)
T ss_dssp --H--------HTTEEEEEECSCHHHHTTT--------------TTCCCCEEEEEEEEEEESSSCS
T ss_pred --h--------hccCCEEEEeccHHHHHHH--------------hhCCCCCceEEEEEEEeccccC
Confidence 2 1368999999999987541 1356889988888898887643
No 31
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.66 E-value=3.9e-07 Score=84.11 Aligned_cols=68 Identities=15% Similarity=0.157 Sum_probs=56.5
Q ss_pred cCCCceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEec--CCeE-EEEeCCCcEEEcCEEEEecChh
Q 021822 33 FGEDSYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQS--KNKV-IITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 33 ~~~~~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~--~~~v-~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
|+...|... +||+++|+++|++.+.+ .|++|+++++|++|... ++++ .|.+ +|+++.||.||+|+++.
T Consensus 229 ~~~~~~~~p-~gG~~~l~~al~~~~~~------~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 229 YGKSPYLYP-MYGLGELPQGFARLSAI------YGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYF 299 (453)
T ss_dssp HSSCSEEEE-TTCTTHHHHHHHHHHHH------TTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGC
T ss_pred hcCCceEee-CCCHHHHHHHHHHHHHH------cCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCcc
Confidence 444566344 89999999999999877 59999999999999987 6665 5666 57789999999999885
No 32
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.42 E-value=9.5e-07 Score=79.89 Aligned_cols=199 Identities=12% Similarity=0.114 Sum_probs=116.5
Q ss_pred ccccccCcccccccccCCcccc----cc-c-cCCC-ceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEE
Q 021822 8 NDFEEAEPTRISSLKNTFPRQL----ME-D-FGED-SYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKIN 80 (307)
Q Consensus 8 ~~~~~~~~~~~~s~~~~~~~~~----~~-~-~~~~-~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~ 80 (307)
+.-.||.+++++|+..+. +.. ++ . |.+. +.+. +||+++|+++|++. .|.+|++|++|++|
T Consensus 180 ~~k~~~~~~~~Lsa~~~~-Rvp~~~~~d~~yf~~~~qg~P--~gGy~~l~e~l~~~---------~g~~V~l~~~v~~~- 246 (397)
T 3hdq_A 180 TRKQWGLDPSELDASVTA-RVPTRTNRDNRYFADTYQAMP--LHGYTRMFQNMLSS---------PNIKVMLNTDYREI- 246 (397)
T ss_dssp HHHHHSSCGGGSBTTTGG-GSCCCSSCCCBSCCCSEEEEE--TTCHHHHHHHHTCS---------TTEEEEESCCGGGT-
T ss_pred hCchhCCCHHHHHHHHHH-hcCcccccCccchhhhheecc--CCCHHHHHHHHHhc---------cCCEEEECCeEEec-
Confidence 345689999999976432 221 11 1 1221 2233 89999999999875 38899999999833
Q ss_pred ecCCeEEEEeCCCcEEEcCEEEEecChhhhccCcccccCCCCHHHHHHHhhcCCCcceEEEEEcCCCCcCCCCCcceEEe
Q 021822 81 QSKNKVIITTEDGSVYHANYVIVTVSVGVLQSDLIGFVPRLPLWKKLAINNFDMAIYTKIFMKFPYKFWPTGPGTEFLLY 160 (307)
Q Consensus 81 ~~~~~v~V~~~~G~~~~ad~VI~a~P~~~l~~~~i~~~p~l~~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~ 160 (307)
+..+.+|.||+|+|++.+.. . ....+.|.+...+.+.++...+.. ..++-+
T Consensus 247 ------------~~~~~~d~vI~T~P~d~~~~----~----------~~g~L~yrsl~~~~~~~~~~~~~~---~~~vn~ 297 (397)
T 3hdq_A 247 ------------ADFIPFQHMIYTGPVDAFFD----F----------CYGKLPYRSLEFRHETHDTEQLLP---TGTVNY 297 (397)
T ss_dssp ------------TTTSCEEEEEECSCHHHHTT----T----------TTCCCCEEEEEEEEEEESSSCSCS---SSEEEC
T ss_pred ------------cccccCCEEEEcCCHHHHHH----H----------hcCCCCCceEEEEEEEeccccCCC---CeEEEe
Confidence 33457899999999988743 1 135688999999999998765543 233334
Q ss_pred ecCCCCceeeee--eccccCCCCceEEEEecchhhHHHhhCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEecccCcCCC
Q 021822 161 AHETRGYFTIWQ--HLENELPGENMIFVTVTDEESRRIEQQSEKKTKAEIMQVLKKMFGNGKQIPEPDTMLIPKWWSNRL 238 (307)
Q Consensus 161 ~~~~~~~~~~~~--~~~~~~~g~~~l~~~~~~~~a~~~~~~~~e~~~~~~~~~L~~~~p~g~~~~~~~~~~~~~W~~~~~ 238 (307)
.+.+ ++..+.. ++...++++.+|+.-++....+ + .+|
T Consensus 298 ~d~~-p~tRi~e~k~~~~~~~~~t~i~~Ey~~~~~~-----p--------------yYp--------------------- 336 (397)
T 3hdq_A 298 PNDY-AYTRVSEFKHITGQRHHQTSVVYEYPRAEGD-----P--------------YYP--------------------- 336 (397)
T ss_dssp SSSS-SCSEEEEHHHHHCCCCSSEEEEEEEEESSSS-----C--------------CEE---------------------
T ss_pred CCCC-cceEEEeecccCCCCCCCEEEEEEECCCCCc-----c--------------ccc---------------------
Confidence 3333 4433321 2211223445554433210000 0 022
Q ss_pred CCCcCCCCCCCCCh--hhhhHhhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 239 YKGSYSNWPNGYTL--HSYHDLQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 239 ~~g~y~~~~~g~~~--~~~~~~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
...+.... ..+..+....++|+|+|-.-...| -.|+.++.+|+.+++.++.
T Consensus 337 ------v~~~~~~~~~~~y~~~a~~~~~v~~~GRlg~y~Y-~~md~~i~~al~~~~~~~~ 389 (397)
T 3hdq_A 337 ------VPRPENAELYKKYEALADAAQDVTFVGRLATYRY-YNMDQVVAQALATFRRLQG 389 (397)
T ss_dssp ------CCSHHHHHHHHHHHHHHHHCTTEEECSTTTTTCC-CCHHHHHHHHHHHHHHHHC
T ss_pred ------cCchhHHHHHHHHHHHHhcCCCEEEcccceEEEe-ccHHHHHHHHHHHHHHHhc
Confidence 11000000 011222222358999998877655 4699999999999998865
No 33
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=98.39 E-value=1.4e-05 Score=76.31 Aligned_cols=95 Identities=9% Similarity=0.101 Sum_probs=69.9
Q ss_pred ccCCCceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecC--CeE-EEEeCCCcEEEcCEEEEecChh
Q 021822 32 DFGEDSYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSK--NKV-IITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 32 ~~~~~~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~--~~v-~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
+|+...+.+. .|||++|+++|++.+.. .|++|+++++|++|..++ +++ .|.+.+|+++.||+||+ ++.
T Consensus 364 ~yg~sg~~yp-~GG~g~L~qaL~r~~~~------~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs--~~~ 434 (650)
T 1vg0_A 364 RYGNTPFLFP-LYGQGELPQCFCRMCAV------FGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFII--EDS 434 (650)
T ss_dssp SSSSSSEEEE-TTCTTHHHHHHHHHHHH------TTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEE--EGG
T ss_pred hhccCceEEe-CCchhHHHHHHHHHHHH------cCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEE--Chh
Confidence 4554344444 89999999999999887 699999999999999876 555 46667899999999998 333
Q ss_pred hhccCcccccCCCCHHHHHHHhhcCCCcceEEEEEcCCCCc
Q 021822 109 VLQSDLIGFVPRLPLWKKLAINNFDMAIYTKIFMKFPYKFW 149 (307)
Q Consensus 109 ~l~~~~i~~~p~l~~~~~~~i~~~~~~~~~kv~l~~~~~~w 149 (307)
.+.. .. ..++.++.+.++++.++++.-
T Consensus 435 ~lp~-------~~-------~~~~~~~~v~R~i~i~~~pi~ 461 (650)
T 1vg0_A 435 YLSE-------NT-------CSRVQYRQISRAVLITDGSVL 461 (650)
T ss_dssp GBCT-------TT-------TTTCCCEEEEEEEEEESSCSS
T ss_pred hcCH-------hH-------hccccccceEEEEEEecCCCC
Confidence 3321 11 122355678889999988754
No 34
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.17 E-value=0.00022 Score=59.55 Aligned_cols=91 Identities=21% Similarity=0.326 Sum_probs=60.5
Q ss_pred HHhhCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEecccCcCCCCCCcCCCCCCCCChhhhhHhhCCCCcEEEecccccC
Q 021822 195 RIEQQSEKKTKAEIMQVLKKMFGNGKQIPEPDTMLIPKWWSNRLYKGSYSNWPNGYTLHSYHDLQQPFGRIYFAGEHTNS 274 (307)
Q Consensus 195 ~~~~~~~e~~~~~~~~~L~~~~p~g~~~~~~~~~~~~~W~~~~~~~g~y~~~~~g~~~~~~~~~~~p~~~l~~aGd~~~~ 274 (307)
........+..+.....+.... +...+.+.....++|.. +.+... .. .+....+.++|++|||+...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~w~~---a~~~~~-~~-------~~~~~~~~~~v~l~GDa~~g 306 (336)
T 3kkj_A 240 QNLDASREQVIEHLHGAFAELI--DCTMPAPVFSLAHRWLY---ARPAGA-HE-------WGALSDADLGIYVCGDWCLS 306 (336)
T ss_dssp HTTTSCHHHHHHHHHHHHHTTC--SSCCCCCSEEEEEEEEE---EEESSC-CC-------CSSEEETTTTEEECCGGGTT
T ss_pred ccccccchhhhhhhhhhhhhhc--cCCcCcchheeccceee---cccccc-cC-------ccceeeCCCCEEEEecccCC
Confidence 3344556667777777777776 44555677777788853 111111 00 11122345799999999865
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHhhh
Q 021822 275 TYLGYVDGAYFSGINTANALIKCLKHF 301 (307)
Q Consensus 275 ~~~g~~egAv~SG~~aA~~il~~l~~~ 301 (307)
+.+++|+.||++||+.|++.|+.+
T Consensus 307 ---~gv~~A~~sG~~aA~~I~~~L~~e 330 (336)
T 3kkj_A 307 ---GRVEGAWLSGQEAARRLLEHLQLE 330 (336)
T ss_dssp ---SSHHHHHHHHHHHHHHHHHHTTC-
T ss_pred ---cCHHHHHHHHHHHHHHHHHHhhcc
Confidence 459999999999999999999875
No 35
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.11 E-value=3.5e-06 Score=77.26 Aligned_cols=69 Identities=20% Similarity=0.254 Sum_probs=56.9
Q ss_pred cCCCceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEE-EEeCCCcEEEcCEEEEecChhh
Q 021822 33 FGEDSYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVI-ITTEDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 33 ~~~~~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~a~P~~~ 109 (307)
+++..++.. +||+++|+++|++.+.+ .|++|+++++|++|...++++. |. .+|+++.||+||+|+|+..
T Consensus 221 ~g~~~~~~p-~gG~~~l~~~l~~~~~~------~G~~i~~~~~V~~I~~~~~~v~~v~-~~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 221 YGKSPYLYP-LYGLGELPQGFARLSAI------YGGTYMLNKPVDDIIMENGKVVGVK-SEGEVARCKQLICDPSYVP 290 (433)
T ss_dssp SSCCSEEEE-TTCTTHHHHHHHHHHHH------HTCCCBCSCCCCEEEEETTEEEEEE-ETTEEEECSEEEECGGGCG
T ss_pred cCCCcEEEe-CcCHHHHHHHHHHHHHH------cCCEEECCCEEEEEEEeCCEEEEEE-ECCeEEECCEEEECCCCCc
Confidence 444445444 89999999999998876 5999999999999998888865 44 4787899999999998864
No 36
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.05 E-value=7.6e-06 Score=75.55 Aligned_cols=70 Identities=20% Similarity=0.231 Sum_probs=56.5
Q ss_pred ccCCCceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEe-cCCe-EEEEeCCCcEEEcCEEEEecChh
Q 021822 32 DFGEDSYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQ-SKNK-VIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 32 ~~~~~~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~-~~~~-v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
.|++..+..+ +||++.|+++|++.+.+ .|++|+++++|++|.. .+++ +.|.+.+|+++.||+||++....
T Consensus 242 ~yg~s~~~yp-~gG~~~L~~aL~r~~~~------~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 242 AFGKSPFIYP-LYGLGGIPEGFSRMCAI------NGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp HHSSCSEEEE-TTCTTHHHHHHHHHHHH------C--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred hcCCCceEEE-CCCHHHHHHHHHHHHHH------cCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 4555454445 89999999999999987 6999999999999998 5555 46888899889999999998653
No 37
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.30 E-value=0.0031 Score=59.04 Aligned_cols=57 Identities=9% Similarity=0.054 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCC----eEEEEeCCC---cEEEcCEEEEecChh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKN----KVIITTEDG---SVYHANYVIVTVSVG 108 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~----~v~V~~~~G---~~~~ad~VI~a~P~~ 108 (307)
-..+.+.|.+.+.+ .|.+|+++++|++|+.+++ ++.|++.++ .++.||.||.|.-..
T Consensus 119 ~~~l~~~L~~~a~~------~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~ 182 (535)
T 3ihg_A 119 QDKLEPILLAQARK------HGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNR 182 (535)
T ss_dssp HHHHHHHHHHHHHH------TTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHHHh------CCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCc
Confidence 46777788888776 5899999999999999888 888887765 678999999998775
No 38
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.08 E-value=0.00031 Score=62.90 Aligned_cols=60 Identities=7% Similarity=0.048 Sum_probs=38.5
Q ss_pred CceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEec
Q 021822 36 DSYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTV 105 (307)
Q Consensus 36 ~~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~ 105 (307)
.+++.. +|||++|+++|++.+ +.+|++|++|++|...++++.|...+...-..-+|++.+
T Consensus 310 ~~~~~i-~GG~~~l~~~l~~~l---------~~~i~l~~~V~~I~~~~~gv~v~~~~~~~~~g~~~~~~~ 369 (376)
T 2e1m_A 310 ATYWEI-EGGSRMLPETLAKDL---------RDQIVMGQRMVRLEYYDPGRDGHHGELTGPGGPAVAIQT 369 (376)
T ss_dssp CCEEEE-TTCTTHHHHHHHHHG---------GGTEECSEEEEEEEECCCC-------------CCEEEEE
T ss_pred CceEEE-CCcHHHHHHHHHHhc---------CCcEEecCeEEEEEECCCceEEEeCCCcCCCCCeeEEEe
Confidence 445544 899999999999997 457999999999999988877665443223445566554
No 39
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=96.78 E-value=0.0022 Score=56.94 Aligned_cols=57 Identities=7% Similarity=0.082 Sum_probs=50.6
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChhh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~~ 109 (307)
...+++.|++.+.+ .|++|+++++|++|+.+++++.|++.+| ++.||.||+|+....
T Consensus 153 ~~~~~~~l~~~a~~------~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 153 TDALHQGYLRGIRR------NQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHH------TTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHH------CCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhH
Confidence 37889999988877 5999999999999999888899998888 899999999998753
No 40
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=96.78 E-value=0.0032 Score=57.28 Aligned_cols=58 Identities=14% Similarity=0.147 Sum_probs=51.8
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCC---eeEEEEecCCeEE-EEeCCCcEEEcCEEEEecChhh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKK---TVRKINQSKNKVI-ITTEDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~---~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~a~P~~~ 109 (307)
...+++.|++.+.+ .|++|++++ +|++|..+++++. |.+.+|+++.||.||+|+....
T Consensus 160 ~~~~~~~L~~~a~~------~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 160 ARNALVAAAREAQR------MGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHHHHH------TTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred HHHHHHHHHHHHHh------cCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCCh
Confidence 57889999988877 599999999 9999999888887 9999998899999999998864
No 41
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=96.65 E-value=0.081 Score=47.44 Aligned_cols=57 Identities=14% Similarity=0.153 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCe--EEEEeCCCc--EEEcCEEEEecChh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNK--VIITTEDGS--VYHANYVIVTVSVG 108 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~--v~V~~~~G~--~~~ad~VI~a~P~~ 108 (307)
-..+.+.|.+.+.+ .|.+|+.+++|++|+.++++ +.|.+.+|+ ++.||.||.|....
T Consensus 105 r~~~~~~L~~~a~~------~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~ 165 (421)
T 3nix_A 105 RGNFDKTLADEAAR------QGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYG 165 (421)
T ss_dssp HHHHHHHHHHHHHH------HTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHh------CCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCc
Confidence 45677777777765 48999999999999988776 456667887 68999999998765
No 42
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=96.56 E-value=0.0051 Score=54.09 Aligned_cols=58 Identities=5% Similarity=-0.024 Sum_probs=50.2
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCe-EEEEeCCC--cEEEcCEEEEecChhh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNK-VIITTEDG--SVYHANYVIVTVSVGV 109 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~-v~V~~~~G--~~~~ad~VI~a~P~~~ 109 (307)
...+.+.|++.+.+ .|++|+++++|++|+.++++ +.|.+.+| .++.||.||+|+....
T Consensus 149 ~~~~~~~l~~~~~~------~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 149 SHALMLAYQGDAES------DGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHH------TTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHH------CCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcch
Confidence 56889999988877 59999999999999998766 88888888 3789999999998763
No 43
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.53 E-value=0.0052 Score=59.32 Aligned_cols=58 Identities=2% Similarity=0.033 Sum_probs=51.7
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChhh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~~ 109 (307)
...+++.|.+.+.+ .|.+|+++++|++|..++++|.|.+.+|.++.||.||+|+....
T Consensus 416 p~~l~~aL~~~a~~------~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 416 PAELTRNVLELAQQ------QGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHHHH------TTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHHHHh------CCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcch
Confidence 37889999988876 59999999999999999999999998887899999999998863
No 44
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.39 E-value=0.0058 Score=59.14 Aligned_cols=57 Identities=9% Similarity=0.125 Sum_probs=50.2
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCc-EEEcCEEEEecChhh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGS-VYHANYVIVTVSVGV 109 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~-~~~ad~VI~a~P~~~ 109 (307)
..+++.|.+.+.+ .|.+|+++++|++|..++++|.|.+.+|+ ++.||.||+|+....
T Consensus 412 ~~l~~aL~~~a~~------~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 412 SDLTHALMMLAQQ------NGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHHHHH------TTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHHHHHh------CCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcch
Confidence 7889999988876 59999999999999999888999998887 799999999998863
No 45
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=96.28 E-value=0.009 Score=52.79 Aligned_cols=56 Identities=23% Similarity=0.216 Sum_probs=48.6
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChhh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~~ 109 (307)
..+++.|.+.+.+ .|.+|+.+++|++|+.+++++.|++.+| ++.||.||+|+....
T Consensus 149 ~~l~~~l~~~~~~------~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 149 ELAIKTWIQLAKE------AGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHHH------TTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHHH------CCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccH
Confidence 5788888888876 5899999999999999888888988888 599999999998764
No 46
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=96.25 E-value=0.0099 Score=53.91 Aligned_cols=60 Identities=12% Similarity=0.264 Sum_probs=52.6
Q ss_pred CCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChhh
Q 021822 43 PRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 43 ~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~~ 109 (307)
......+.+.|.+.+.+ .|.+|+++++|++|..+++++.|.+.+| ++.||.||+|+....
T Consensus 128 ~~~~~~l~~~L~~~l~~------~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 128 DHSAKDIIRMLMAEMKE------AGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp SSCHHHHHHHHHHHHHH------HTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECCCCSS
T ss_pred CCCHHHHHHHHHHHHHH------CCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECCCCcc
Confidence 45678999999998876 4899999999999999888899999888 899999999997654
No 47
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.09 E-value=0.014 Score=51.85 Aligned_cols=56 Identities=13% Similarity=0.083 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEE-EEeCCCcEEEcCEEEEecChh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVI-ITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~a~P~~ 108 (307)
...+.+.|.+.+.+ .|.+|+.+++|++|+.+++++. |.+.+| ++.||.||+|+...
T Consensus 148 ~~~l~~~l~~~~~~------~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~ 204 (382)
T 1y56_B 148 PFEATTAFAVKAKE------YGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAW 204 (382)
T ss_dssp HHHHHHHHHHHHHH------TTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHHH------CCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchh
Confidence 46888888888876 5899999999999999888887 888877 89999999999875
No 48
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=96.05 E-value=0.0096 Score=52.82 Aligned_cols=55 Identities=18% Similarity=0.122 Sum_probs=48.5
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
..+.+.|.+.+.+ .|.+|+++++|++|+.+++++.|.+.+| ++.||.||+|+...
T Consensus 164 ~~~~~~l~~~~~~------~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~ 218 (382)
T 1ryi_A 164 YFVCKAYVKAAKM------LGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVW 218 (382)
T ss_dssp HHHHHHHHHHHHH------TTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHH------CCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChh
Confidence 6788889888876 5899999999999999888888888777 89999999999875
No 49
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=96.03 E-value=0.013 Score=53.49 Aligned_cols=60 Identities=15% Similarity=0.256 Sum_probs=50.9
Q ss_pred CCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCe-EEEEeCCCcEEEcCEEEEecChhh
Q 021822 44 RGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNK-VIITTEDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 44 gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VI~a~P~~~ 109 (307)
+....+.+.|.+.+.+ .|.+|+++++|++|..++++ +.|.+.+|+++.||.||+|+....
T Consensus 131 ~~~~~l~~~L~~~~~~------~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 131 NKAQSVVDALLTRLKD------LGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp CCHHHHHHHHHHHHHH------TTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred CCHHHHHHHHHHHHHH------CCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 3467899999998877 58999999999999987777 678888887799999999986543
No 50
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=95.93 E-value=0.015 Score=51.65 Aligned_cols=56 Identities=20% Similarity=0.258 Sum_probs=48.7
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChhh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~~ 109 (307)
..+.+.|.+.+.+ .|.+|+.+++|++|+.+++++.|.+.+| ++.||.||+|+....
T Consensus 150 ~~~~~~l~~~~~~------~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 150 ENCIRAYRELAEA------RGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHHHHH------TTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHH------CCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccH
Confidence 6888899988876 5899999999999999888888888776 799999999998753
No 51
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=95.87 E-value=0.017 Score=45.46 Aligned_cols=54 Identities=13% Similarity=0.206 Sum_probs=46.2
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
..+.+.|.+.+.+ .|.+++++ +|++|+.+++++.|++.+| ++.+|.||+|+...
T Consensus 56 ~~~~~~l~~~~~~------~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 56 EELLRRLEAHARR------YGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKD 109 (180)
T ss_dssp HHHHHHHHHHHHH------TTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHHH------cCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCC
Confidence 5777788877776 58999999 9999998877888998888 89999999998763
No 52
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=95.87 E-value=0.019 Score=51.32 Aligned_cols=55 Identities=18% Similarity=0.250 Sum_probs=47.2
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
..+.+.|.+.+.+ .|.+|+++++|++|+.+++++.|.+.+| ++.||.||+|+...
T Consensus 153 ~~~~~~l~~~a~~------~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 153 RGTLAALFTLAQA------AGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHH------TTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHH------cCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcC
Confidence 5788888887766 5899999999999999888888888766 79999999999764
No 53
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=95.80 E-value=0.02 Score=53.78 Aligned_cols=57 Identities=11% Similarity=0.259 Sum_probs=49.4
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeE-EEEeCCCcEEEcCEEEEecChhh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKV-IITTEDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VI~a~P~~~ 109 (307)
..+.+.|.+.+.+ .|.+|+++++|++|..+++++ .|.+.+|+++.||.||+|+....
T Consensus 220 ~~l~~~L~~~l~~------~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIE------LGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHH------TTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHh------cCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 6788889888877 599999999999999887765 48888998899999999997754
No 54
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.73 E-value=0.027 Score=50.20 Aligned_cols=55 Identities=13% Similarity=0.227 Sum_probs=46.4
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecCh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
..+.+.|.+.+.+ .|.+|+++++|++|+.+++++.|.+.+|+++.+|.||+++..
T Consensus 187 ~~~~~~l~~~l~~------~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 187 PAAAKAVQAGLEG------LGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGL 241 (384)
T ss_dssp HHHHHHHHHHHHT------TTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHH------cCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCC
Confidence 3566677777765 489999999999999887788888889988999999999875
No 55
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=95.64 E-value=0.022 Score=50.99 Aligned_cols=58 Identities=9% Similarity=0.225 Sum_probs=50.2
Q ss_pred HHHHHHHHHHhhhccCCCCCC-CCeeecCCeeEEEEecCCeE--EEEeCCCcEEEcCEEEEecChhh
Q 021822 46 FETVVHYIANQFLSHNNNKIT-DPRLKLKKTVRKINQSKNKV--IITTEDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~-g~~i~l~~~V~~I~~~~~~v--~V~~~~G~~~~ad~VI~a~P~~~ 109 (307)
-..+.+.|.+.+.+ . |.+|+++++|++|+.+++++ .|++.+|+++.||.||.|.....
T Consensus 106 r~~l~~~L~~~~~~------~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s 166 (399)
T 2x3n_A 106 CESLRRLVLEKIDG------EATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIAS 166 (399)
T ss_dssp HHHHHHHHHHHHTT------CTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhhh------cCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCCh
Confidence 46888888888875 4 78999999999999988888 89999998899999999997753
No 56
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=95.61 E-value=0.03 Score=50.44 Aligned_cols=55 Identities=24% Similarity=0.339 Sum_probs=45.1
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeE-EEEeCCCcEEEcCEEEEecCh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKV-IITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VI~a~P~ 107 (307)
..+.+.+.+.+.+ .|.+|+++++|++|+.+++++ .|.+.+|+++.||.||+++..
T Consensus 194 ~~~~~~l~~~l~~------~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 194 EALSEFYQAEHRA------HGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGI 249 (415)
T ss_dssp HHHHHHHHHHHHH------TTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCC
T ss_pred HHHHHHHHHHHHh------CCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 3455566666655 589999999999999877776 688899999999999999876
No 57
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=95.50 E-value=0.033 Score=51.59 Aligned_cols=55 Identities=15% Similarity=0.240 Sum_probs=45.1
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
.+.+.|.+.+.+ .|.+|+++++|++|+.+++++.|.+.+|+++.+|.||+++...
T Consensus 224 ~~~~~l~~~l~~------~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 224 DAALVLEESFAE------RGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSV 278 (499)
T ss_dssp HHHHHHHHHHHH------TTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHH------CCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCC
Confidence 455666666665 5899999999999998877788888888889999999998653
No 58
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=95.47 E-value=0.027 Score=51.93 Aligned_cols=54 Identities=11% Similarity=0.237 Sum_probs=45.3
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecCh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
.+.+.|.+.+.+ .|.+|+++++|++|+.+++++.|.+.+|+++.+|.||+++..
T Consensus 233 ~~~~~l~~~l~~------~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 233 DLRQLLNDAMVA------KGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGR 286 (484)
T ss_dssp HHHHHHHHHHHH------HTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCE
T ss_pred HHHHHHHHHHHH------CCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCC
Confidence 455566666655 489999999999999988888999999988999999999976
No 59
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=95.45 E-value=0.033 Score=51.17 Aligned_cols=55 Identities=16% Similarity=0.267 Sum_probs=45.4
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecCh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
..+.+.|.+.+.+ .|.+|+++++|++|+.+++++.|.+.+|+++.+|.||+++..
T Consensus 202 ~~~~~~l~~~l~~------~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 202 KSLSQMLRHDLEK------NDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGV 256 (472)
T ss_dssp HHHHHHHHHHHHH------TTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHh------cCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCC
Confidence 4555666666655 489999999999999877788888888989999999999876
No 60
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=95.44 E-value=0.037 Score=49.72 Aligned_cols=55 Identities=18% Similarity=0.327 Sum_probs=45.2
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeE-EEEeCCCcEEEcCEEEEecCh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKV-IITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VI~a~P~ 107 (307)
..+.+.|.+.+.+ .|.+|+++++|++|+.+++++ .|.+.+|+++.||.||+++..
T Consensus 184 ~~~~~~l~~~l~~------~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 184 PEISSYFHDRHSG------AGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGV 239 (404)
T ss_dssp HHHHHHHHHHHHH------TTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCE
T ss_pred HHHHHHHHHHHHh------CCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCC
Confidence 4555666666665 589999999999999877765 588899999999999999876
No 61
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=95.33 E-value=0.035 Score=49.62 Aligned_cols=56 Identities=20% Similarity=0.243 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChhh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~~ 109 (307)
...+.+.|.+.+. +.+|+++++|++|+.+++++.|++.+|+++.||.||.|.....
T Consensus 98 ~~~l~~~L~~~~~--------~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 153 (397)
T 2vou_A 98 YDSIYGGLYELFG--------PERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGAS 153 (397)
T ss_dssp HHHHHHHHHHHHC--------STTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTC
T ss_pred HHHHHHHHHHhCC--------CcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcch
Confidence 4678888888763 7899999999999998889999999998899999999987653
No 62
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=95.22 E-value=0.032 Score=50.20 Aligned_cols=58 Identities=14% Similarity=0.272 Sum_probs=48.3
Q ss_pred CHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEec----CCeEEEEeCCCcEEEcCEEEEecChhh
Q 021822 45 GFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQS----KNKVIITTEDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 45 G~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~----~~~v~V~~~~G~~~~ad~VI~a~P~~~ 109 (307)
....+.+.|.+.+.+ .|.+|+++++|++|..+ ++++.|.+.+| ++.||.||+|+....
T Consensus 107 ~~~~l~~~L~~~~~~------~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 107 GAEQIVEMLKSECDK------YGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp CTHHHHHHHHHHHHH------HTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEEEECCCCSS
T ss_pred CHHHHHHHHHHHHHH------CCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEEEECCCCcc
Confidence 567888888888876 48999999999999976 56688888777 799999999996543
No 63
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=95.12 E-value=0.052 Score=50.21 Aligned_cols=55 Identities=13% Similarity=0.270 Sum_probs=44.4
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
.+.+.+.+.+.+ .|.+|+++++|++|+.+++++.|.+.+|+++.||.||+++...
T Consensus 227 ~~~~~~~~~l~~------~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 227 YLSNWTMEKVRR------EGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLE 281 (493)
T ss_dssp HHHHHHHHHHHT------TTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHh------cCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCC
Confidence 344555555554 4899999999999998777788888899899999999998763
No 64
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.03 E-value=0.046 Score=49.94 Aligned_cols=56 Identities=18% Similarity=0.182 Sum_probs=46.3
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
..+.+.|.+.+.+ .|.+|+++++|++|+.+++++.|++.+|+++.+|.||+|+...
T Consensus 208 ~~~~~~l~~~l~~------~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 208 LEVSRAAERVFKK------QGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRR 263 (455)
T ss_dssp HHHHHHHHHHHHH------HTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHH------CCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCC
Confidence 4566666666665 4899999999999998888888888888889999999998763
No 65
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=94.97 E-value=0.042 Score=49.17 Aligned_cols=56 Identities=14% Similarity=0.119 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChhh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~~ 109 (307)
-..|.+.|.+.+. +.+|+++++|++|+.+++++.|++.+|+++.||.||.|.....
T Consensus 127 r~~l~~~L~~~~~--------~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 127 RNDLRAILLNSLE--------NDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMS 182 (398)
T ss_dssp HHHHHHHHHHTSC--------TTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTC
T ss_pred HHHHHHHHHhhcC--------CCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcch
Confidence 3567777887764 4689999999999998888999999998899999999998754
No 66
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=94.93 E-value=0.052 Score=48.35 Aligned_cols=55 Identities=16% Similarity=0.088 Sum_probs=46.8
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCe-EEEEeCCCcEEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNK-VIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
..+.+.|.+.+.+ .|.+|+++++|++|..++++ +.|.+.+| ++.+|.||+|+...
T Consensus 174 ~~~~~~l~~~~~~------~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~ 229 (405)
T 2gag_B 174 DHVAWAFARKANE------MGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGH 229 (405)
T ss_dssp HHHHHHHHHHHHH------TTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHH------CCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchh
Confidence 3788888888876 58999999999999988766 56888888 79999999999874
No 67
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=94.89 E-value=0.046 Score=49.20 Aligned_cols=55 Identities=11% Similarity=0.190 Sum_probs=43.4
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
.+.+.|.+.+.+ .|.+|+++++|++|+.++....|.+.+|+++.||.||+++...
T Consensus 186 ~~~~~l~~~l~~------~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 186 RIGAWLRGLLTE------LGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAE 240 (410)
T ss_dssp HHHHHHHHHHHH------HTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHH------CCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCe
Confidence 344555555554 3899999999999998665457888999999999999999763
No 68
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=94.82 E-value=0.052 Score=50.61 Aligned_cols=55 Identities=15% Similarity=0.303 Sum_probs=44.5
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCe----EEEEeCCCc-EEEcCEEEEecCh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNK----VIITTEDGS-VYHANYVIVTVSV 107 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~----v~V~~~~G~-~~~ad~VI~a~P~ 107 (307)
..+.+.|.+.+.+ .|.+|+++++|++|+.++++ +.|.+.+|+ ++.||.||+|+..
T Consensus 255 ~~~~~~l~~~l~~------~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 255 NETRAYVLDRMKE------QGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGE 314 (523)
T ss_dssp HHHHHHHHHHHHH------TTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCC
T ss_pred HHHHHHHHHHHHh------CCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCC
Confidence 3456666676665 58999999999999986555 778888887 7999999999865
No 69
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=94.72 E-value=0.072 Score=46.10 Aligned_cols=56 Identities=23% Similarity=0.408 Sum_probs=47.5
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
..+.+.|.+.+.+ .+.+++++++|++|+.+++.+.|.+.+|+++.+|.||+|+...
T Consensus 65 ~~~~~~l~~~~~~------~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 65 KDLVKGLVEQVAP------FNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp HHHHHHHHHHHGG------GCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHH------cCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCC
Confidence 6777788777765 4788999999999998877888988888889999999999874
No 70
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=94.71 E-value=0.061 Score=46.77 Aligned_cols=56 Identities=13% Similarity=0.113 Sum_probs=47.2
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEE-EEeCCCcEEEcCEEEEecChhh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVI-ITTEDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~a~P~~~ 109 (307)
..+.+.|.+.+.+ .|.+++++++|++|+..++++. |++.+| ++.||.||+|+....
T Consensus 76 ~~~~~~l~~~~~~------~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 76 AEVLAYLAQYEQK------YALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHHHHHHHHH------TTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGG
T ss_pred HHHHHHHHHHHHH------cCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCC
Confidence 5677777766655 5889999999999999988898 998888 899999999998643
No 71
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=94.67 E-value=0.058 Score=48.29 Aligned_cols=55 Identities=13% Similarity=0.154 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
-..|.+.|.+.+. ..+|+++++|++|+.+++++.|++.+|+++.||.||.|....
T Consensus 126 r~~l~~~L~~~~~--------~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~ 180 (407)
T 3rp8_A 126 RAELQREMLDYWG--------RDSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSH 180 (407)
T ss_dssp HHHHHHHHHHHHC--------GGGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTT
T ss_pred HHHHHHHHHHhCC--------cCEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcC
Confidence 4677778888774 257999999999999999999999999999999999998765
No 72
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=94.63 E-value=0.057 Score=49.06 Aligned_cols=56 Identities=16% Similarity=0.201 Sum_probs=47.0
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEe---------------cCCeE-EEEeCCCcEE--EcCEEEEecCh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQ---------------SKNKV-IITTEDGSVY--HANYVIVTVSV 107 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~---------------~~~~v-~V~~~~G~~~--~ad~VI~a~P~ 107 (307)
...+.+.|.+.+.+ .|.+|+.+++|++|+. +++++ .|.+.+| ++ .||.||+|+..
T Consensus 180 ~~~l~~~L~~~~~~------~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~ 252 (448)
T 3axb_A 180 AEKVVDYYYRRASG------AGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGV 252 (448)
T ss_dssp HHHHHHHHHHHHHH------TTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGG
T ss_pred HHHHHHHHHHHHHh------CCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCc
Confidence 45888899988876 5999999999999998 55564 6888888 68 99999999987
Q ss_pred h
Q 021822 108 G 108 (307)
Q Consensus 108 ~ 108 (307)
.
T Consensus 253 ~ 253 (448)
T 3axb_A 253 W 253 (448)
T ss_dssp G
T ss_pred C
Confidence 5
No 73
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=94.63 E-value=0.086 Score=48.27 Aligned_cols=54 Identities=15% Similarity=0.197 Sum_probs=44.7
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCc-EEEcCEEEEecCh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGS-VYHANYVIVTVSV 107 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~-~~~ad~VI~a~P~ 107 (307)
.+.+.|.+.+.+ .|.+|+++++|++|+.+++++.|.+.+|+ ++.+|.||+++..
T Consensus 208 ~~~~~l~~~l~~------~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~ 262 (463)
T 2r9z_A 208 LLSATLAENMHA------QGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGR 262 (463)
T ss_dssp HHHHHHHHHHHH------TTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHH------CCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCC
Confidence 455666666655 48999999999999987777888888998 8999999999865
No 74
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=94.61 E-value=0.075 Score=48.45 Aligned_cols=55 Identities=13% Similarity=0.227 Sum_probs=45.1
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
..+.+.|.+.+.+ .|.+|+++++|++|+..++++.|.+.+| ++.||.||+++...
T Consensus 189 ~~~~~~l~~~l~~------~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 189 KEMVAEVQKSLEK------QAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLH 243 (452)
T ss_dssp HHHHHHHHHHHHT------TTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCB
T ss_pred HHHHHHHHHHHHH------cCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCC
Confidence 4566667777665 4899999999999998777888888777 89999999998763
No 75
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=94.43 E-value=0.099 Score=48.33 Aligned_cols=54 Identities=13% Similarity=0.244 Sum_probs=43.4
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCC-eEEEEeCCCcEEEcCEEEEecCh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKN-KVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~-~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
.+.+.|.+.+.+ .|.+|+++++|++|+.+++ .+.|.+.+|+++.+|.||+++..
T Consensus 236 ~~~~~l~~~l~~------~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 236 TIREEVTKQLTA------NGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGR 290 (495)
T ss_dssp HHHHHHHHHHHH------TTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHh------CCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCC
Confidence 445566666655 4899999999999998764 47888889988999999999864
No 76
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=94.28 E-value=0.091 Score=47.91 Aligned_cols=54 Identities=11% Similarity=0.246 Sum_probs=43.7
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCe-EEEEeCCCcEEEcCEEEEecCh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNK-VIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
.+.+.|.+.+.+ .|.+|+++++|++|+.++++ +.|.+.+|+++.+|.||+++..
T Consensus 209 ~~~~~l~~~l~~------~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~ 263 (450)
T 1ges_A 209 MISETLVEVMNA------EGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGR 263 (450)
T ss_dssp HHHHHHHHHHHH------HSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHH------CCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCC
Confidence 455666666655 48999999999999987654 7888889988999999999865
No 77
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=94.28 E-value=0.086 Score=52.09 Aligned_cols=57 Identities=25% Similarity=0.218 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeE-EEEeCCCcEEEcCEEEEecChhh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKV-IITTEDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VI~a~P~~~ 109 (307)
-..+++.|++.+.+ .|++|+.+++|++|+.+++++ .|.+.+| ++.||.||+|+....
T Consensus 150 p~~l~~~L~~~a~~------~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 150 AARAVQLLIKRTES------AGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHHH------TTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHH------cCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccch
Confidence 35788999988877 599999999999999887775 5888777 799999999998764
No 78
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=94.27 E-value=0.094 Score=48.42 Aligned_cols=54 Identities=9% Similarity=0.202 Sum_probs=43.7
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCC-eEEEEeCCCcEEEcCEEEEecCh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKN-KVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~-~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
.+.+.|.+.+.+ .|.+|+++++|++|+.+++ .+.|.+.+|+++.+|.||+++..
T Consensus 232 ~~~~~l~~~l~~------~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~ 286 (490)
T 1fec_A 232 ELRKQLTEQLRA------NGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGR 286 (490)
T ss_dssp HHHHHHHHHHHH------TTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHh------CCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCC
Confidence 455566666655 4899999999999998764 47888889988999999999865
No 79
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=94.27 E-value=0.087 Score=48.81 Aligned_cols=58 Identities=17% Similarity=0.177 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCc---EEEcCEEEEecChhh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGS---VYHANYVIVTVSVGV 109 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~---~~~ad~VI~a~P~~~ 109 (307)
-..+.+.|.+.+.+ .|.+|+++++|++|+.++++|+|++.+|. ++.||.||.|--...
T Consensus 106 ~~~l~~~L~~~~~~------~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 106 QSTTESVLEEWALG------RGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp HHHHHHHHHHHHHH------TTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHHh------CCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCccc
Confidence 35677777777765 58999999999999999888988887764 789999999987753
No 80
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=94.26 E-value=0.54 Score=41.22 Aligned_cols=56 Identities=13% Similarity=0.083 Sum_probs=40.6
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEE-EEe-CCC--cEEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVI-ITT-EDG--SVYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~-V~~-~~G--~~~~ad~VI~a~P~~ 108 (307)
..+-+.|++...+ .|.+++++++|+.+..+++++. +.. .+| .++.||.||-|-...
T Consensus 102 ~~~~~~L~~~a~~------~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~ 161 (397)
T 3oz2_A 102 DKFDKHLAALAAK------AGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp HHHHHHHHHHHHH------HTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHHh------cCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCccc
Confidence 4566666666655 4899999999999998887753 322 234 358899999987664
No 81
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=94.24 E-value=0.1 Score=47.79 Aligned_cols=54 Identities=9% Similarity=0.187 Sum_probs=44.2
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCe-EEEE-eCCCcEEEcCEEEEecCh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNK-VIIT-TEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~-v~V~-~~~G~~~~ad~VI~a~P~ 107 (307)
..+.+.|.+.+.+ .|.+|+++++|++|+.++++ +.|. +.+|+ +.+|.||+++..
T Consensus 211 ~~~~~~l~~~l~~------~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~ 266 (463)
T 4dna_A 211 QDMRRGLHAAMEE------KGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGR 266 (463)
T ss_dssp HHHHHHHHHHHHH------TTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCE
T ss_pred HHHHHHHHHHHHH------CCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCc
Confidence 4556666666665 58999999999999987665 6788 88897 999999999865
No 82
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=94.16 E-value=0.12 Score=45.18 Aligned_cols=56 Identities=23% Similarity=0.354 Sum_probs=47.4
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCC-eEEEEeCCCcEEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKN-KVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~-~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
..+.+.|.+.+.+ .+.+++++++|++|+..++ .+.|++.+|+++.||.||+|+...
T Consensus 74 ~~~~~~l~~~~~~------~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 74 IDLVESLWAQAER------YNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp HHHHHHHHHHHHT------TCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHHH------hCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCC
Confidence 6777888877765 4789999999999998765 688998888889999999999874
No 83
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=94.14 E-value=0.09 Score=48.73 Aligned_cols=58 Identities=7% Similarity=0.028 Sum_probs=47.4
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCc---EEEcCEEEEecChhh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGS---VYHANYVIVTVSVGV 109 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~---~~~ad~VI~a~P~~~ 109 (307)
-..+.+.|.+.+.+ .|.+|+++++|++|+.++++|+|++.+|. ++.||.||.|--...
T Consensus 105 ~~~l~~~L~~~~~~------~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 105 QSVTETHLEQWATG------LGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp HHHHHHHHHHHHHH------TTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTC
T ss_pred HHHHHHHHHHHHHH------CCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcch
Confidence 35677777777765 58999999999999999889888877664 689999999987753
No 84
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=94.05 E-value=0.1 Score=48.03 Aligned_cols=54 Identities=13% Similarity=0.249 Sum_probs=42.5
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCe--EEEEeCCC-cEEEcCEEEEecCh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNK--VIITTEDG-SVYHANYVIVTVSV 107 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~--v~V~~~~G-~~~~ad~VI~a~P~ 107 (307)
.+.+.|.+.+.+ .|.+|+++++|++|+.++++ +.|.+.+| +++.+|.||+++..
T Consensus 227 ~~~~~l~~~l~~------~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 227 CIQNTITDHYVK------EGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp HHHHHHHHHHHH------HTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHh------CCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCC
Confidence 455556666554 48999999999999986554 77888888 78999999999865
No 85
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=94.02 E-value=0.04 Score=49.52 Aligned_cols=55 Identities=16% Similarity=0.251 Sum_probs=41.6
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeE---------EEEecCCeEEEEeCCCcEEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVR---------KINQSKNKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~---------~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
..+.+.|.+.+.+ .|.+|+.+++|+ +|..+++++.|.+.+| ++.||.||+|+...
T Consensus 172 ~~l~~~L~~~~~~------~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~ 235 (405)
T 3c4n_A 172 GSLALLAAQQAIG------QGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAA 235 (405)
T ss_dssp HHHHHHHHHHHHT------TTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHH------CCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCcc
Confidence 6788999988876 589999999999 8888777787877776 79999999999875
No 86
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=93.94 E-value=0.12 Score=46.76 Aligned_cols=55 Identities=18% Similarity=0.276 Sum_probs=43.7
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEe--cCCeE-EEEeCCCcEEEcCEEEEecCh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQ--SKNKV-IITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~--~~~~v-~V~~~~G~~~~ad~VI~a~P~ 107 (307)
..+.+.|.+.+.+ .|.+|+++++|++|+. .++++ .|.+.+|+++.+|.||+++..
T Consensus 191 ~~~~~~l~~~l~~------~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 191 PPVSAFYEHLHRE------AGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGL 248 (431)
T ss_dssp HHHHHHHHHHHHH------HTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCE
T ss_pred HHHHHHHHHHHHh------CCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 3455666666655 4899999999999997 55555 688889988999999999876
No 87
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.80 E-value=0.15 Score=47.06 Aligned_cols=55 Identities=22% Similarity=0.315 Sum_probs=44.2
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCC-eEEEEeCCCcE-EEcCEEEEecCh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKN-KVIITTEDGSV-YHANYVIVTVSV 107 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~-~v~V~~~~G~~-~~ad~VI~a~P~ 107 (307)
..+.+.+.+.+.+ .|.+|+++++|++|+.+++ .+.|.+.+|++ +.+|.||+++..
T Consensus 217 ~~~~~~l~~~l~~------~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~ 273 (500)
T 1onf_A 217 ESVINVLENDMKK------NNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGR 273 (500)
T ss_dssp HHHHHHHHHHHHH------TTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCB
T ss_pred hhhHHHHHHHHHh------CCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCC
Confidence 3556666666665 4899999999999997654 47888889987 999999999875
No 88
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=93.74 E-value=0.088 Score=47.91 Aligned_cols=58 Identities=19% Similarity=0.099 Sum_probs=44.6
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCC---Cc---EEEcCEEEEecChhh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTED---GS---VYHANYVIVTVSVGV 109 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~---G~---~~~ad~VI~a~P~~~ 109 (307)
...+.+.|.+.+.. .+..|+++++|++|+..+++|.|++.+ |+ ++.||.||+|+....
T Consensus 114 ~~~l~~~l~~~~~~------~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s 177 (447)
T 2gv8_A 114 RHTIQEYQRIYAQP------LLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYE 177 (447)
T ss_dssp HHHHHHHHHHHHGG------GGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEESEEEECCCSSS
T ss_pred HHHHHHHHHHHHHH------hhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEeCEEEECCCCCC
Confidence 44666666655543 356799999999999888888887765 76 789999999998743
No 89
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=93.74 E-value=0.13 Score=45.42 Aligned_cols=55 Identities=13% Similarity=0.158 Sum_probs=45.4
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChhh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~~ 109 (307)
-..+.+.|.+.+.+ .|.+|+++++|++|+. ++ .|++.+|+++.||.||.|.....
T Consensus 106 r~~l~~~L~~~~~~------~gv~i~~~~~v~~i~~--~~-~v~~~~g~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 106 RSHLHDALVNRARA------LGVDISVNSEAVAADP--VG-RLTLQTGEVLEADLIVGADGVGS 160 (379)
T ss_dssp HHHHHHHHHHHHHH------TTCEEESSCCEEEEET--TT-EEEETTSCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHHHh------cCCEEEeCCEEEEEEe--CC-EEEECCCCEEEcCEEEECCCccH
Confidence 36777788877766 4889999999999998 34 78888898899999999987753
No 90
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=93.71 E-value=0.15 Score=47.22 Aligned_cols=58 Identities=10% Similarity=0.096 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEe---CCCc--EEEcCEEEEecChhh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITT---EDGS--VYHANYVIVTVSVGV 109 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~---~~G~--~~~ad~VI~a~P~~~ 109 (307)
-..++..|++.+.+ .|++|+.+++|++|..+++.+.|.+ .+|+ ++.||.||+|+.+..
T Consensus 148 ~~~l~~~l~~~a~~------~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 148 DARLVLANAQMVVR------KGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHHH------TTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHHH------cCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 46788888888876 5999999999999998776666766 3575 689999999998764
No 91
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=93.69 E-value=0.13 Score=45.60 Aligned_cols=52 Identities=13% Similarity=0.181 Sum_probs=41.8
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCC-eEEEEeCCCcEEEcCEEEEecChh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKN-KVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~-~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
.|-+.|.+.+ +.+|+++++|++++..++ +++|++.||++++||.||-|=...
T Consensus 113 ~L~~~L~~~~---------~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~ 165 (412)
T 4hb9_A 113 ELKEILNKGL---------ANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSN 165 (412)
T ss_dssp HHHHHHHTTC---------TTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTT
T ss_pred HHHHHHHhhc---------cceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCC
Confidence 4555566654 568999999999998654 689999999999999999887654
No 92
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=93.69 E-value=0.13 Score=42.30 Aligned_cols=55 Identities=15% Similarity=0.018 Sum_probs=43.5
Q ss_pred HHHHHHHHHhhhccCCCCCC-CCeeecCCeeEEEEecCCeE-EEEeCCCcEEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKIT-DPRLKLKKTVRKINQSKNKV-IITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~-g~~i~l~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
..+.+.|.+.+.+ . |.+++ +++|++|..+++++ .|.+.+|+++.||.||+|+...
T Consensus 68 ~~~~~~l~~~~~~------~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 68 WAFHARAKYLLEG------LRPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSF 124 (232)
T ss_dssp HHHHHHHHHHHHT------CTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTC
T ss_pred HHHHHHHHHHHHc------CCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCC
Confidence 4666777777764 3 66787 67999999887775 6888888889999999999874
No 93
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=93.61 E-value=0.14 Score=44.01 Aligned_cols=56 Identities=16% Similarity=0.303 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCC-eEEEEeCCCcEEEcCEEEEecChh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKN-KVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~-~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
...+.+.|.+.+.+ .+.+++++++|++|+..++ .+.|.+.+|+ +.+|.||+|+...
T Consensus 66 ~~~~~~~~~~~~~~------~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 66 AQELINNLKEQMAK------FDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNG 122 (332)
T ss_dssp HHHHHHHHHHHHTT------SCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHHH------hCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCC
Confidence 46788888888765 5889999999999998876 7889988885 9999999999873
No 94
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=93.59 E-value=0.12 Score=47.92 Aligned_cols=59 Identities=14% Similarity=0.097 Sum_probs=44.7
Q ss_pred CCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEec-CCeE-EEEeC-CCc--EEEcC-EEEEecChh
Q 021822 44 RGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQS-KNKV-IITTE-DGS--VYHAN-YVIVTVSVG 108 (307)
Q Consensus 44 gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~-~~~v-~V~~~-~G~--~~~ad-~VI~a~P~~ 108 (307)
+|...+.+.|.+.+.+ .|.+|+++++|++|..+ ++++ .|... +|+ ++.|| .||+|+-..
T Consensus 199 ~g~~~l~~~L~~~~~~------~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~ 263 (510)
T 4at0_A 199 GGGYMLMKPLVETAEK------LGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSF 263 (510)
T ss_dssp CTTHHHHHHHHHHHHH------TTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHH------cCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCCh
Confidence 4555899999998877 59999999999999987 4543 34433 343 48996 999998764
No 95
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=93.57 E-value=0.18 Score=45.81 Aligned_cols=55 Identities=16% Similarity=0.305 Sum_probs=43.0
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEE-EEeCCCcEEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVI-ITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~a~P~~ 108 (307)
..+.+.|.+.+.+ .|.+|+++++|++|+..++++. |.+ +|+++.+|.||+++...
T Consensus 191 ~~~~~~l~~~l~~------~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 191 KEFTDILAKDYEA------HGVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSDIAILCIGFR 246 (452)
T ss_dssp HHHHHHHHHHHHH------TTCEEEESSCEEEEEEETTEEEEEET-TSCEEEESEEEECCCEE
T ss_pred hhHHHHHHHHHHH------CCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECCEEEECcCCC
Confidence 4566667666665 4899999999999997566664 554 78889999999998753
No 96
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=93.54 E-value=0.14 Score=44.88 Aligned_cols=55 Identities=22% Similarity=0.260 Sum_probs=43.2
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
..+.+.|.+.+.+ .|.+|+++++|++|+.+++++.|.+.+| ++.||+||+|+...
T Consensus 88 ~~~~~~l~~~~~~------~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~ 142 (369)
T 3d1c_A 88 ETYAEYLQVVANH------YELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDY 142 (369)
T ss_dssp HHHHHHHHHHHHH------TTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCST
T ss_pred HHHHHHHHHHHHH------cCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCC
Confidence 3455555554443 4789999999999998877888988777 68999999999874
No 97
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=93.43 E-value=0.1 Score=46.21 Aligned_cols=58 Identities=12% Similarity=0.034 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEE-EEe---CCCcEEEcCEEEEecChhh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVI-ITT---EDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~-V~~---~~G~~~~ad~VI~a~P~~~ 109 (307)
-..+.+.|.+.+.+ .|.+|+++++|++|+.+++++. |++ .++.++.||.||.|.....
T Consensus 101 ~~~l~~~L~~~~~~------~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 101 RDKFDKHLAALAAK------AGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHH------HTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHHh------CCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 45677777777765 4899999999999999888775 766 3455799999999987653
No 98
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=93.38 E-value=0.17 Score=46.25 Aligned_cols=55 Identities=13% Similarity=0.188 Sum_probs=41.0
Q ss_pred HHHHHHHHhh-hccCCCCCCCCeeecCCeeEEEEecCCeEEEEeC--CC--cEEEcCEEEEecChh
Q 021822 48 TVVHYIANQF-LSHNNNKITDPRLKLKKTVRKINQSKNKVIITTE--DG--SVYHANYVIVTVSVG 108 (307)
Q Consensus 48 ~l~~~L~~~~-~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~--~G--~~~~ad~VI~a~P~~ 108 (307)
.+.+.|.+.+ .+ .|.+|+++++|++|+.+++++.|.+. +| +++.+|.||+++...
T Consensus 216 ~~~~~l~~~l~~~------~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~ 275 (468)
T 2qae_A 216 DVTNALVGALAKN------EKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRR 275 (468)
T ss_dssp HHHHHHHHHHHHH------TCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHhhc------CCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcc
Confidence 3455566666 54 48999999999999987777777665 66 578999999998653
No 99
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=93.34 E-value=0.18 Score=46.11 Aligned_cols=55 Identities=15% Similarity=0.187 Sum_probs=43.2
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeC-C--Cc--EEEcCEEEEecCh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTE-D--GS--VYHANYVIVTVSV 107 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~-~--G~--~~~ad~VI~a~P~ 107 (307)
..+.+.|.+.+.+ .|.+|+++++|++|+.+++++.|.+. + |+ ++.+|.||+++..
T Consensus 210 ~~~~~~l~~~l~~------~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~ 269 (464)
T 2eq6_A 210 PETAALLRRALEK------EGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGR 269 (464)
T ss_dssp HHHHHHHHHHHHH------TTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHh------cCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCc
Confidence 3455566666655 48999999999999988777777765 6 76 7899999999865
No 100
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=93.32 E-value=0.21 Score=46.15 Aligned_cols=57 Identities=11% Similarity=0.165 Sum_probs=46.5
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCe--EEEEeCCCcEEEcCEEEEecChhh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNK--VIITTEDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~--v~V~~~~G~~~~ad~VI~a~P~~~ 109 (307)
-..+.+.|.+.+.+ .|.+++.+ +|++|+.++++ +.|.+.+|+++.||.||.|.....
T Consensus 172 ~~~l~~~L~~~a~~------~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 172 ADEVARYLSEYAIA------RGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHHHH------TTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHH------CCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcch
Confidence 35777778777765 48999999 99999986554 678888888899999999998753
No 101
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=93.30 E-value=0.16 Score=47.69 Aligned_cols=57 Identities=11% Similarity=0.114 Sum_probs=45.0
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecC-CeE---EEEeCCCc--EEEcCEEEEecChh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSK-NKV---IITTEDGS--VYHANYVIVTVSVG 108 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~-~~v---~V~~~~G~--~~~ad~VI~a~P~~ 108 (307)
-..+.+.|.+.+.+ .|.+|+++++|++|..++ +++ .+...+|+ ++.+|.||+|+...
T Consensus 249 ~~~l~~~L~~~~~~------~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~ 311 (566)
T 1qo8_A 249 GPEIIDTLRKAAKE------QGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGY 311 (566)
T ss_dssp HHHHHHHHHHHHHH------TTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHh------cCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCc
Confidence 45788888888876 589999999999999877 653 34434775 58899999999764
No 102
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=93.27 E-value=0.19 Score=42.86 Aligned_cols=56 Identities=16% Similarity=0.293 Sum_probs=45.8
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
-..+.+.|.+.+.+ .|.++++ .+|++|+.+++.+.|.+.+|+++.+|.||+|+-..
T Consensus 69 ~~~~~~~~~~~~~~------~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 69 ASDMIKVFNKHIEK------YEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHHHHHHT------TTCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHHHH------cCCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCC
Confidence 35778888877765 4788999 99999999888899999888899999999998764
No 103
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=93.19 E-value=0.22 Score=42.43 Aligned_cols=55 Identities=16% Similarity=0.288 Sum_probs=45.7
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecCh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
...+.+.|.+.+.+ .|.++++ .+|++|+.+++++.|.+.+|+++.+|.||+|+..
T Consensus 58 ~~~~~~~l~~~~~~------~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~ 112 (311)
T 2q0l_A 58 GLDFMQPWQEQCFR------FGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGG 112 (311)
T ss_dssp HHHHHHHHHHHHHT------TSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHH------cCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCC
Confidence 35677777777765 4788988 7999999888888888888888999999999985
No 104
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=93.13 E-value=0.21 Score=47.04 Aligned_cols=56 Identities=13% Similarity=0.130 Sum_probs=44.3
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecC-CeE---EEEeCCCc--EEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSK-NKV---IITTEDGS--VYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~-~~v---~V~~~~G~--~~~ad~VI~a~P~~ 108 (307)
..+.+.|.+.+.+ .|.+|+++++|++|..++ +++ .+...+|+ ++.+|.||+|+-..
T Consensus 255 ~~l~~~L~~~~~~------~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~ 316 (571)
T 1y0p_A 255 AHVVQVLYDNAVK------RNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGF 316 (571)
T ss_dssp HHHHHHHHHHHHH------TTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHh------cCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCc
Confidence 5788888888876 589999999999999876 543 34433675 58999999999763
No 105
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=93.11 E-value=0.077 Score=50.08 Aligned_cols=57 Identities=14% Similarity=0.114 Sum_probs=47.4
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEe--CCC-cEEEcCEEEEecChh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITT--EDG-SVYHANYVIVTVSVG 108 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~--~~G-~~~~ad~VI~a~P~~ 108 (307)
-..+.+.|.+.+.+ .|.+|+++++|++|+.+++++.|++ .+| +++.||.||.|.-..
T Consensus 147 ~~~l~~~L~~~a~~------~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~ 206 (570)
T 3fmw_A 147 QSRTEALLAEHARE------AGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGR 206 (570)
T ss_dssp HHHHHHHHHHHHHH------HTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSS
T ss_pred HHHHHHHHHHHHHh------CCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCC
Confidence 45677777777765 4889999999999999988888877 678 689999999998765
No 106
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=93.11 E-value=0.18 Score=47.11 Aligned_cols=57 Identities=23% Similarity=0.318 Sum_probs=44.6
Q ss_pred HHHHHHHHHHhhhccCCCCCCCC--eeecCCeeEEEEecCC--eEEEEeCCCcEEEcCEEEEecChh
Q 021822 46 FETVVHYIANQFLSHNNNKITDP--RLKLKKTVRKINQSKN--KVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~--~i~l~~~V~~I~~~~~--~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
...+.+.|.+.+.+ .|. +|+++++|++|+.+++ +|.|++.+|+++.||.||+|+...
T Consensus 86 ~~ei~~~l~~~~~~------~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~ 146 (540)
T 3gwf_A 86 QPEILEYLEDVVDR------FDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLL 146 (540)
T ss_dssp HHHHHHHHHHHHHH------TTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHHHH------cCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCccc
Confidence 34566666555544 354 7999999999998765 789999999889999999999863
No 107
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=93.10 E-value=0.18 Score=46.25 Aligned_cols=56 Identities=16% Similarity=0.141 Sum_probs=42.9
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCC---cEEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDG---SVYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G---~~~~ad~VI~a~P~~ 108 (307)
..+.+.+.+.+.+ .|.+|+++++|++|+.+++++.|.+.++ +++.+|.||+++...
T Consensus 221 ~~~~~~l~~~l~~------~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 221 EQVAKEAQKILTK------QGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp HHHHHHHHHHHHH------TTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHh------CCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCc
Confidence 3455556666655 4889999999999998887777776654 568999999999763
No 108
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=93.08 E-value=0.19 Score=47.09 Aligned_cols=57 Identities=14% Similarity=0.168 Sum_probs=46.2
Q ss_pred HHHHHHHHHHhhhccCCCCCC-CCeeecCCeeEEEEecCCe--EEEEeCCCcEEEcCEEEEecChhh
Q 021822 46 FETVVHYIANQFLSHNNNKIT-DPRLKLKKTVRKINQSKNK--VIITTEDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~-g~~i~l~~~V~~I~~~~~~--v~V~~~~G~~~~ad~VI~a~P~~~ 109 (307)
-..+.+.|.+.+.+ . |.+|+++ +|++|+.++++ +.|.+.+|+++.||.||.|.....
T Consensus 193 ~~~l~~~L~~~~~~------~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 193 AHLVADFLRRFATE------KLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHHH------HSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHh------cCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCch
Confidence 35677788877765 4 8899999 99999986554 578888898899999999998754
No 109
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=93.06 E-value=0.25 Score=46.31 Aligned_cols=54 Identities=13% Similarity=0.325 Sum_probs=42.7
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEe-------------------cCCeEEEEeCCCcEEEcCEEEEecCh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQ-------------------SKNKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~-------------------~~~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
.+.+.+.+.+.+ .|.+|+++++|++|+. .++++.+.+.+|+++.||.||+++..
T Consensus 193 ~~~~~l~~~l~~------~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~ 265 (565)
T 3ntd_A 193 EMAGFAHQAIRD------QGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGV 265 (565)
T ss_dssp HHHHHHHHHHHH------TTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHHH------CCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCC
Confidence 445555555554 4899999999999987 35677888888989999999999854
No 110
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=92.94 E-value=0.2 Score=44.40 Aligned_cols=58 Identities=9% Similarity=0.086 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecC-CeEEEEe-CCCc--EEEcCEEEEecChhh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSK-NKVIITT-EDGS--VYHANYVIVTVSVGV 109 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~-~~v~V~~-~~G~--~~~ad~VI~a~P~~~ 109 (307)
-..+.+.|.+.+.+ .|.+|+++++|++|+.++ +++.|++ .+|+ ++.||.||.|.....
T Consensus 102 ~~~l~~~L~~~~~~------~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S 163 (394)
T 1k0i_A 102 QTEVTRDLMEAREA------CGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHG 163 (394)
T ss_dssp HHHHHHHHHHHHHH------TTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTC
T ss_pred hHHHHHHHHHHHHh------cCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCc
Confidence 35677778877765 488999999999999864 5677777 6886 689999999987753
No 111
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=92.84 E-value=0.24 Score=45.07 Aligned_cols=57 Identities=7% Similarity=-0.123 Sum_probs=45.1
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEE-EEeC---CCc--EEEcCEEEEecChhh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVI-ITTE---DGS--VYHANYVIVTVSVGV 109 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~-V~~~---~G~--~~~ad~VI~a~P~~~ 109 (307)
..+.+.|.+.+.+ .|.+|+++++|++|..+++++. |++. +|+ ++.||.||.|.....
T Consensus 100 ~~l~~~L~~~a~~------~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 100 PLYNQRVLKEAQD------RGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp HHHHHHHHHHHHH------TTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHH------cCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 5677788877765 4899999999999998887753 4443 675 689999999997754
No 112
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=92.79 E-value=0.23 Score=46.62 Aligned_cols=57 Identities=12% Similarity=0.212 Sum_probs=44.0
Q ss_pred HHHHHHHHHHhhhccCCCCCCCC--eeecCCeeEEEEecCC--eEEEEeCCCcEEEcCEEEEecChh
Q 021822 46 FETVVHYIANQFLSHNNNKITDP--RLKLKKTVRKINQSKN--KVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~--~i~l~~~V~~I~~~~~--~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
-..+.+.|.+.+.+ .+. +|+++++|++|+.+++ .|.|++.+|+++.||.||+|+...
T Consensus 98 ~~ei~~yl~~~~~~------~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~ 158 (549)
T 4ap3_A 98 QPEILAYLEHVADR------FDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPL 158 (549)
T ss_dssp HHHHHHHHHHHHHH------TTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSE
T ss_pred HHHHHHHHHHHHHH------cCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCC
Confidence 34555555555443 244 7999999999997764 689999999889999999999853
No 113
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=92.77 E-value=0.25 Score=46.50 Aligned_cols=57 Identities=18% Similarity=0.215 Sum_probs=43.6
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecC-CeE---EEEeCCCc--EEEcCEEEEecChh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSK-NKV---IITTEDGS--VYHANYVIVTVSVG 108 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~-~~v---~V~~~~G~--~~~ad~VI~a~P~~ 108 (307)
-..+.+.|.+.+.+ .|.+|+++++|++|..++ +++ .+...+|+ ++.||.||+|+...
T Consensus 254 g~~l~~~L~~~~~~------~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~ 316 (572)
T 1d4d_A 254 GAHVAQVLWDNAVK------RGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGF 316 (572)
T ss_dssp HHHHHHHHHHHHHH------TTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHHH------cCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCC
Confidence 34788889888877 589999999999998776 543 34334674 58999999999753
No 114
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=92.68 E-value=0.27 Score=45.03 Aligned_cols=55 Identities=9% Similarity=0.186 Sum_probs=42.5
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCe-EEEEe-----CCCcEEEcCEEEEecChh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNK-VIITT-----EDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~-v~V~~-----~~G~~~~ad~VI~a~P~~ 108 (307)
.+.+.|.+.+.+ .|.+|+++++|++|+.++++ +.|++ .+|+++.+|.||+++...
T Consensus 221 ~~~~~l~~~l~~------~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 221 EISKNFQRILQK------QGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp HHHHHHHHHHHH------TTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHH------CCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCC
Confidence 455566666655 48999999999999987766 77763 456679999999998753
No 115
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=92.67 E-value=0.25 Score=42.04 Aligned_cols=57 Identities=16% Similarity=0.119 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecC---CeEEEEeCCCcEEEcCEEEEecChh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSK---NKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~---~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
...+.+.|.+.+.+ .+.+++++++|++|+.+. +.+.|.+.+|+++.||.||+|+...
T Consensus 55 ~~~~~~~~~~~~~~------~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 55 GQKLAGALKVHVDE------YDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp HHHHHHHHHHHHHT------SCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHHH------cCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 34677777777655 478999999999998653 3688888888889999999999763
No 116
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=92.59 E-value=0.29 Score=43.92 Aligned_cols=50 Identities=20% Similarity=0.405 Sum_probs=39.9
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecCh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
.+.+.+.+.+.+ .|.+|+++++|++|+ + + .|.+.+|+++.||.||+++..
T Consensus 188 ~~~~~l~~~l~~------~GV~i~~~~~v~~i~-~-~--~v~~~~g~~i~~D~vi~a~G~ 237 (408)
T 2gqw_A 188 TLADFVARYHAA------QGVDLRFERSVTGSV-D-G--VVLLDDGTRIAADMVVVGIGV 237 (408)
T ss_dssp HHHHHHHHHHHH------TTCEEEESCCEEEEE-T-T--EEEETTSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHH------cCcEEEeCCEEEEEE-C-C--EEEECCCCEEEcCEEEECcCC
Confidence 455566666655 489999999999999 3 3 667788988999999999876
No 117
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=92.53 E-value=0.15 Score=46.92 Aligned_cols=54 Identities=13% Similarity=0.087 Sum_probs=41.9
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCC----CcEEEcCEEEEecCh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTED----GSVYHANYVIVTVSV 107 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~----G~~~~ad~VI~a~P~ 107 (307)
.+.+.|.+.+.+ .|.+|+++++|++|+.+++++.|.+.+ |+++.+|.||+++..
T Consensus 227 ~~~~~l~~~l~~------~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~ 284 (482)
T 1ojt_A 227 DLVKVWQKQNEY------RFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGR 284 (482)
T ss_dssp HHHHHHHHHHGG------GEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCE
T ss_pred HHHHHHHHHHHh------cCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCC
Confidence 445555555554 488999999999999877777777766 777899999999865
No 118
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=92.52 E-value=0.26 Score=45.61 Aligned_cols=58 Identities=9% Similarity=0.103 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCe---EEEEeCCCc--EEEcCEEEEecChhh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNK---VIITTEDGS--VYHANYVIVTVSVGV 109 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~---v~V~~~~G~--~~~ad~VI~a~P~~~ 109 (307)
-..+.+.|.+.+.+ .|.+|+++++|++|..++++ +.+.+.+|+ ++.||.||.|.....
T Consensus 110 r~~l~~~L~~~a~~------~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 110 RARFDDMLLRNSER------KGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHHHH------TTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHHh------CCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 45777788877765 48999999999999998775 455666785 789999999998753
No 119
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=92.35 E-value=0.32 Score=44.38 Aligned_cols=55 Identities=9% Similarity=0.158 Sum_probs=43.7
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
..+.+.|.+.+.+ .|.+|+++++|++|+.+++.+.|.+. +.++.+|.||+++...
T Consensus 216 ~~~~~~l~~~l~~------~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 216 PAIGEAVTAAFRA------EGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRT 270 (467)
T ss_dssp HHHHHHHHHHHHH------TTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHh------CCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCC
Confidence 3566677777765 58999999999999987777777775 4579999999998653
No 120
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.32 E-value=0.2 Score=45.56 Aligned_cols=56 Identities=18% Similarity=0.278 Sum_probs=42.7
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeC---CCcEEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTE---DGSVYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~---~G~~~~ad~VI~a~P~~ 108 (307)
..+.+.|.+.+.+ .|.+|+++++|++|+.+++++.|++. +|+++.+|.||+++...
T Consensus 211 ~~~~~~l~~~l~~------~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 211 KQMAAIIKKRLKK------KGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRR 269 (455)
T ss_dssp HHHHHHHHHHHHH------TTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHH------CCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCC
Confidence 3455666666655 48999999999999987777776654 44578999999998763
No 121
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=92.25 E-value=0.19 Score=47.29 Aligned_cols=58 Identities=12% Similarity=-0.007 Sum_probs=46.4
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeE-EEEeC---CC--cEEEcCEEEEecChhh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKV-IITTE---DG--SVYHANYVIVTVSVGV 109 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v-~V~~~---~G--~~~~ad~VI~a~P~~~ 109 (307)
-..++..|++.+.+ .|++|+++++|++|..+++++ .|.+. +| .++.||.||+|+.+..
T Consensus 169 ~~~l~~~L~~~a~~------~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 169 DARLTLEIMKEAVA------RGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHH------TTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHH------cCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 36888899888876 599999999999999988774 46554 34 3689999999998764
No 122
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=92.23 E-value=0.26 Score=44.95 Aligned_cols=54 Identities=22% Similarity=0.295 Sum_probs=41.4
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeC-CC--cEEEcCEEEEecCh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTE-DG--SVYHANYVIVTVSV 107 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~-~G--~~~~ad~VI~a~P~ 107 (307)
.+.+.+.+.+.+ .|.+|+++++|++|+.+++++.|.+. +| +++.+|.||+++..
T Consensus 213 ~~~~~l~~~l~~------~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~ 269 (464)
T 2a8x_A 213 DVSKEIEKQFKK------LGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGF 269 (464)
T ss_dssp HHHHHHHHHHHH------HTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHH------cCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCC
Confidence 445555555554 38999999999999987767777764 56 57899999999865
No 123
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=92.12 E-value=0.35 Score=40.69 Aligned_cols=57 Identities=14% Similarity=0.098 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
...+.+.|.+.+.+ .++-..++.+|++|+.+++++.|.+.+|+++.||.||+|+...
T Consensus 55 ~~~~~~~~~~~~~~------~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~ 111 (297)
T 3fbs_A 55 PGEIIAEARRQIER------YPTIHWVEGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVT 111 (297)
T ss_dssp HHHHHHHHHHHHTT------CTTEEEEESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHHHh------cCCeEEEEeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCC
Confidence 46788888887764 2222334669999999888899999999889999999999773
No 124
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=92.09 E-value=0.35 Score=41.27 Aligned_cols=55 Identities=9% Similarity=0.170 Sum_probs=40.1
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeE-EEEeCC----C--cEEEcCEEEEecCh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKV-IITTED----G--SVYHANYVIVTVSV 107 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v-~V~~~~----G--~~~~ad~VI~a~P~ 107 (307)
..+.+.|.+.+.+ .|.+|+++++|++|+.+++++ .|.+.+ | +++.+|.||++++.
T Consensus 184 ~~~~~~l~~~l~~------~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~ 245 (320)
T 1trb_A 184 KILIKRLMDKVEN------GNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGH 245 (320)
T ss_dssp HHHHHHHHHHHHT------SSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCE
T ss_pred HHHHHHHHHhccc------CCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCC
Confidence 3455666666655 488999999999999876553 244433 4 46899999999876
No 125
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=92.04 E-value=0.37 Score=45.08 Aligned_cols=56 Identities=9% Similarity=0.059 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecCh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
-..+.+.|.+.+.+ .|.++++++.|.+++..++++.|.+.++..+.+|.|++++..
T Consensus 262 D~ei~~~l~~~l~~------~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR 317 (542)
T 4b1b_A 262 DQQCAVKVKLYMEE------QGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGR 317 (542)
T ss_dssp CHHHHHHHHHHHHH------TTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCE
T ss_pred chhHHHHHHHHHHh------hcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccc
Confidence 34567777777776 489999999999999999999999988888999999999854
No 126
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=91.98 E-value=0.26 Score=46.07 Aligned_cols=42 Identities=19% Similarity=0.260 Sum_probs=36.1
Q ss_pred CCeeecCCeeEEEEecC--CeEEEEeCCCcEEEcCEEEEecChh
Q 021822 67 DPRLKLKKTVRKINQSK--NKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 67 g~~i~l~~~V~~I~~~~--~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
+.+|+++++|++++.++ +.|.|++.+|+++.||.||+|+...
T Consensus 110 ~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 110 RSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQL 153 (542)
T ss_dssp GGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSC
T ss_pred CceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCC
Confidence 46799999999999765 3689999999889999999999863
No 127
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=91.95 E-value=0.27 Score=42.35 Aligned_cols=54 Identities=17% Similarity=0.134 Sum_probs=44.7
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
..+.+.|.+.+.+ .|.++++++ |++|+..++++.|.+ +|+++.+|.||+|+...
T Consensus 70 ~~~~~~l~~~~~~------~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 70 VELTDKFRKQSER------FGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAV 123 (333)
T ss_dssp HHHHHHHHHHHHH------TTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHH------CCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCC
Confidence 4677777777765 488999997 999998888888887 77789999999999764
No 128
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=91.79 E-value=0.28 Score=44.83 Aligned_cols=55 Identities=22% Similarity=0.332 Sum_probs=42.0
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeC---CC--cEEEcCEEEEecChh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTE---DG--SVYHANYVIVTVSVG 108 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~---~G--~~~~ad~VI~a~P~~ 108 (307)
.+.+.|.+.+.+ .|.+|+++++|++|+.+++++.|++. +| +++.+|.||+++...
T Consensus 219 ~~~~~l~~~l~~------~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 219 EIRKQFQRSLEK------QGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRT 278 (470)
T ss_dssp HHHHHHHHHHHH------SSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEE
T ss_pred HHHHHHHHHHHH------cCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCC
Confidence 455666666655 48999999999999987766766654 44 578999999998653
No 129
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=91.58 E-value=0.33 Score=44.63 Aligned_cols=54 Identities=19% Similarity=0.225 Sum_probs=41.5
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCC---C--cEEEcCEEEEecCh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTED---G--SVYHANYVIVTVSV 107 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~---G--~~~~ad~VI~a~P~ 107 (307)
.+.+.+.+.+.+ .|.+|+++++|++|+.+++++.|.+.+ | +++.+|.||+++..
T Consensus 240 ~~~~~l~~~l~~------~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~ 298 (491)
T 3urh_A 240 EVAKQLQRMLTK------QGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGR 298 (491)
T ss_dssp HHHHHHHHHHHH------TTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHh------CCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCC
Confidence 455556666655 489999999999999888877666542 5 57899999999875
No 130
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=91.41 E-value=0.32 Score=44.51 Aligned_cols=54 Identities=22% Similarity=0.208 Sum_probs=40.6
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEe--cCCeEEEEeC-----CCcEEEcCEEEEecCh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQ--SKNKVIITTE-----DGSVYHANYVIVTVSV 107 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~--~~~~v~V~~~-----~G~~~~ad~VI~a~P~ 107 (307)
.+.+.|.+.+.+ .|.+|+++++|++|+. +++.+.|.+. +|+++.+|.||+++..
T Consensus 225 ~~~~~l~~~l~~------~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 285 (478)
T 1v59_A 225 EVAKATQKFLKK------QGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGR 285 (478)
T ss_dssp HHHHHHHHHHHH------TTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHH------CCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCC
Confidence 355566666655 4899999999999997 5566666654 3457899999999865
No 131
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=91.38 E-value=0.4 Score=45.20 Aligned_cols=53 Identities=17% Similarity=0.367 Sum_probs=41.7
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecCh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
..+.+.|.+.+.+ .|.+|+++++|++|+.++++ |.+.+|+++.+|.||+++..
T Consensus 228 ~~~~~~l~~~l~~------~GV~i~~~~~v~~i~~~~~~--v~~~~g~~i~~D~Vi~a~G~ 280 (588)
T 3ics_A 228 YEMAAYVHEHMKN------HDVELVFEDGVDALEENGAV--VRLKSGSVIQTDMLILAIGV 280 (588)
T ss_dssp HHHHHHHHHHHHH------TTCEEECSCCEEEEEGGGTE--EEETTSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHH------cCCEEEECCeEEEEecCCCE--EEECCCCEEEcCEEEEccCC
Confidence 4556666666665 48999999999999876554 55678888999999999864
No 132
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=91.32 E-value=0.28 Score=43.89 Aligned_cols=51 Identities=16% Similarity=0.216 Sum_probs=40.2
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecCh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
..+.+.+.+.+.+ .|.+++++++|++|+.++ |.+.+|+++.+|.||++++.
T Consensus 218 ~~~~~~~~~~l~~------~gV~~~~~~~v~~i~~~~----v~~~~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 218 PNSRKAVASIYNQ------LGIKLVHNFKIKEIREHE----IVDEKGNTIPADITILLPPY 268 (409)
T ss_dssp HHHHHHHHHHHHH------HTCEEECSCCEEEECSSE----EEETTSCEEECSEEEEECCE
T ss_pred HHHHHHHHHHHHH------CCCEEEcCCceEEECCCe----EEECCCCEEeeeEEEECCCC
Confidence 4566666666655 489999999999997542 66788989999999999875
No 133
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=91.02 E-value=0.89 Score=41.83 Aligned_cols=62 Identities=8% Similarity=0.072 Sum_probs=44.8
Q ss_pred CceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChh
Q 021822 36 DSYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 36 ~~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
....+. -||...+-+.|.+ .|.+|+++++|++|+.+++...|.+.+|+++.+|.||+++...
T Consensus 251 ~~vvVi-GgG~~gle~~l~~----------~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 251 RKVAVT-GSKADEVIQELER----------WGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRR 312 (493)
T ss_dssp SEEEEE-STTHHHHHHHHHH----------HTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEE
T ss_pred CEEEEE-CCCHHHHHHHHHh----------CCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcC
Confidence 444554 3566555544332 2899999999999987654446777888899999999998763
No 134
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=90.95 E-value=0.16 Score=45.30 Aligned_cols=42 Identities=7% Similarity=0.061 Sum_probs=37.6
Q ss_pred CCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecCh
Q 021822 66 TDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
.|.+|+++++|..++.+.+...|.+.+|+++.+|.||+++|.
T Consensus 215 ~gi~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 215 ALIEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp CSEEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCCE
T ss_pred cCcEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecCc
Confidence 478999999999999888888889999999999999998765
No 135
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=90.89 E-value=0.5 Score=43.97 Aligned_cols=56 Identities=11% Similarity=0.133 Sum_probs=45.8
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCe--EEEEeCCCcEEEcCEEEEecChhh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNK--VIITTEDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~--v~V~~~~G~~~~ad~VI~a~P~~~ 109 (307)
..+.+.|.+.+.+ .|.+++.+ +|++|+.++++ +.|.+.+|+++.||.||.|.....
T Consensus 165 ~~l~~~L~~~a~~------~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 165 HLVADFLKRWAVE------RGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHHH------TTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHHH------CCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCch
Confidence 6777788877765 48999999 89999986554 578888888899999999998754
No 136
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=90.67 E-value=0.59 Score=43.02 Aligned_cols=54 Identities=17% Similarity=0.212 Sum_probs=42.3
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeC--CC--cEEEcCEEEEecCh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTE--DG--SVYHANYVIVTVSV 107 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~--~G--~~~~ad~VI~a~P~ 107 (307)
..+.+.+.+.+.+ ..+|+++++|++|+.+++++.|.+. +| +++.+|.||+++..
T Consensus 215 ~~~~~~l~~~l~~-------~V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~ 272 (492)
T 3ic9_A 215 EEMKRYAEKTFNE-------EFYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGR 272 (492)
T ss_dssp HHHHHHHHHHHHT-------TSEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCC
T ss_pred HHHHHHHHHHHhh-------CcEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCC
Confidence 4556666666654 3789999999999988888877764 67 57899999999865
No 137
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=90.59 E-value=0.51 Score=40.45 Aligned_cols=55 Identities=15% Similarity=0.161 Sum_probs=45.8
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeC---CCcEEEcCEEEEecCh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTE---DGSVYHANYVIVTVSV 107 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~---~G~~~~ad~VI~a~P~ 107 (307)
...+.+.|.+.+.+ .|.++++++ |++|+.+++.+.+.+. ++.++.+|.||+|+-.
T Consensus 83 ~~~~~~~~~~~~~~------~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~ 140 (338)
T 3itj_A 83 GSELMDRMREQSTK------FGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGA 140 (338)
T ss_dssp HHHHHHHHHHHHHH------TTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHH------cCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCC
Confidence 45777888877776 588999999 9999998888888874 6677999999999876
No 138
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=90.57 E-value=0.44 Score=44.83 Aligned_cols=57 Identities=14% Similarity=0.010 Sum_probs=44.4
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeE-EEEeC---CCc--EEEcCEEEEecChhh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKV-IITTE---DGS--VYHANYVIVTVSVGV 109 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v-~V~~~---~G~--~~~ad~VI~a~P~~~ 109 (307)
..++..|++.+.+ .|++|+.+++|++|..+++++ .|.+. +|+ ++.||.||+|+.+..
T Consensus 188 ~~l~~~l~~~a~~------~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 188 ARLVIDNIKKAAE------DGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHH------TTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHHH------cCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 4677788877766 599999999999999887763 45532 343 689999999998764
No 139
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=90.50 E-value=0.35 Score=44.19 Aligned_cols=57 Identities=18% Similarity=0.300 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCe--eecCCeeEEEEecCC--eEEEEeCC---C--cEEEcCEEEEecChh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPR--LKLKKTVRKINQSKN--KVIITTED---G--SVYHANYVIVTVSVG 108 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~--i~l~~~V~~I~~~~~--~v~V~~~~---G--~~~~ad~VI~a~P~~ 108 (307)
-..+.+.|.+.+.+ .|.+ |+++++|++|+..++ +|.|++.+ | .++.||.||+|+...
T Consensus 100 ~~~l~~~l~~~~~~------~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~ 165 (464)
T 2xve_A 100 REVLWDYIKGRVEK------AGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHF 165 (464)
T ss_dssp HHHHHHHHHHHHHH------HTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCCSS
T ss_pred HHHHHHHHHHHHHH------cCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCCCC
Confidence 35666767665554 2555 999999999998765 67777654 4 468999999999853
No 140
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=90.38 E-value=0.51 Score=43.28 Aligned_cols=54 Identities=7% Similarity=0.094 Sum_probs=40.4
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCC-eEEEEeCCCc-----EEEcCEEEEecCh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKN-KVIITTEDGS-----VYHANYVIVTVSV 107 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~-~v~V~~~~G~-----~~~ad~VI~a~P~ 107 (307)
.+.+.|.+.+.+ .|.+|+++++|++|+..++ .+.|.+.+++ ++.+|.||+++..
T Consensus 228 ~~~~~l~~~l~~------~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 228 QMAELVAASMEE------RGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp HHHHHHHHHHHH------TTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHh------CCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECccc
Confidence 455566666655 4899999999999998654 4666665543 6899999999865
No 141
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=90.23 E-value=0.66 Score=43.86 Aligned_cols=58 Identities=17% Similarity=0.251 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEec-CCeEEEEeC-CC--cEEEcCEEEEecChhh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQS-KNKVIITTE-DG--SVYHANYVIVTVSVGV 109 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~-~~~v~V~~~-~G--~~~~ad~VI~a~P~~~ 109 (307)
-..+.+.|.+.+.+ .|.+|+.+++|++|+.+ ++.+.|++. +| .++.||.||.|.....
T Consensus 127 r~~l~~~L~~~a~~------~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 127 REEFDKLLLDEARS------RGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHHH------TTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHHHh------CCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 45777778777766 48999999999999986 455777776 66 4689999999997753
No 142
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=89.89 E-value=0.63 Score=40.15 Aligned_cols=54 Identities=19% Similarity=0.289 Sum_probs=43.1
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEE-EeCCCcEEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVII-TTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V-~~~~G~~~~ad~VI~a~P~~ 108 (307)
..+.+.|.+.+.+ .|.++++++ |++|+. ++.+.| .+.+|+++.+|.||+|+...
T Consensus 71 ~~~~~~l~~~~~~------~~v~~~~~~-v~~i~~-~~~~~v~~~~~g~~~~~d~lviAtG~~ 125 (335)
T 2a87_A 71 PELMDEMREQALR------FGADLRMED-VESVSL-HGPLKSVVTADGQTHRARAVILAMGAA 125 (335)
T ss_dssp HHHHHHHHHHHHH------TTCEEECCC-EEEEEC-SSSSEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHH------cCCEEEEee-EEEEEe-CCcEEEEEeCCCCEEEeCEEEECCCCC
Confidence 5677777776665 588999997 999988 556777 77788889999999999763
No 143
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=89.87 E-value=0.47 Score=44.41 Aligned_cols=40 Identities=10% Similarity=0.165 Sum_probs=35.1
Q ss_pred CeeecCCeeEEEEecC--CeEEEEeCCCcEEEcCEEEEecCh
Q 021822 68 PRLKLKKTVRKINQSK--NKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 68 ~~i~l~~~V~~I~~~~--~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
..|+++++|++++.++ +.|.|++.+|+++.||.||+|+..
T Consensus 104 ~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~ 145 (545)
T 3uox_A 104 KHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGP 145 (545)
T ss_dssp GGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCS
T ss_pred CcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCC
Confidence 3799999999998764 468999999988999999999985
No 144
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=89.84 E-value=0.31 Score=43.54 Aligned_cols=57 Identities=7% Similarity=0.133 Sum_probs=42.4
Q ss_pred HHHHHHHHHhhhccCCCCCCC-CeeecCCeeEEEEecCCeEEEEeCC---C--cEEEcCEEEEecChhh
Q 021822 47 ETVVHYIANQFLSHNNNKITD-PRLKLKKTVRKINQSKNKVIITTED---G--SVYHANYVIVTVSVGV 109 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g-~~i~l~~~V~~I~~~~~~v~V~~~~---G--~~~~ad~VI~a~P~~~ 109 (307)
..|.+.|.+.+.+. .| .+|+++++|++|+. ++++.|++.+ | +++.||.||.|.....
T Consensus 107 ~~l~~~L~~~~~~~-----~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S 169 (410)
T 3c96_A 107 GELQMILLAAVRER-----LGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALGADVLVGADGIHS 169 (410)
T ss_dssp HHHHHHHHHHHHHH-----HCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEEESEEEECCCTTC
T ss_pred HHHHHHHHHHHHhh-----CCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEecCEEEECCCccc
Confidence 45666666665431 14 47999999999998 7778887765 7 4689999999987753
No 145
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=89.71 E-value=0.85 Score=43.03 Aligned_cols=57 Identities=19% Similarity=0.199 Sum_probs=45.7
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCC-eEE-EEeC------CC---------cEEEcCEEEEecChh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKN-KVI-ITTE------DG---------SVYHANYVIVTVSVG 108 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~-~v~-V~~~------~G---------~~~~ad~VI~a~P~~ 108 (307)
...|.+.|.+.+.+ +|.+|+++++|++|..+++ .+. |.+. +| .++.||.||.|.-..
T Consensus 143 r~~l~~~L~~~a~~------~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~ 216 (584)
T 2gmh_A 143 LGHLVSWMGEQAEA------LGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCH 216 (584)
T ss_dssp HHHHHHHHHHHHHH------TTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTT
T ss_pred HHHHHHHHHHHHHH------cCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCC
Confidence 46888888888876 5899999999999998764 453 7665 33 579999999999775
No 146
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=89.66 E-value=0.71 Score=42.19 Aligned_cols=55 Identities=5% Similarity=0.075 Sum_probs=41.5
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCe--EEEEeCC---C----cEEEcCEEEEecCh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNK--VIITTED---G----SVYHANYVIVTVSV 107 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~--v~V~~~~---G----~~~~ad~VI~a~P~ 107 (307)
..+.+.+.+.+.+ .|.+|+++++|++|+..+++ +.|.+.+ | +++.+|.||+++..
T Consensus 228 ~~~~~~~~~~l~~------~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~ 291 (478)
T 3dk9_A 228 SMISTNCTEELEN------AGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGR 291 (478)
T ss_dssp HHHHHHHHHHHHH------TTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHH------CCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeecc
Confidence 3455566666655 48999999999999987655 6677664 2 56899999999875
No 147
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=89.63 E-value=0.79 Score=42.09 Aligned_cols=52 Identities=25% Similarity=0.397 Sum_probs=39.3
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeE-EEEeCCCcEEEcCEEEEecCh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKV-IITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VI~a~P~ 107 (307)
.+.+.+.+.+.+ .|.+|+++++|++|+. ++++ .|.+ +|+++.+|.||+++..
T Consensus 237 ~~~~~l~~~l~~------~GV~i~~~~~v~~i~~-~~~v~~v~~-~g~~i~~D~Vi~a~G~ 289 (490)
T 2bc0_A 237 DLTDLMAKNMEE------HGIQLAFGETVKEVAG-NGKVEKIIT-DKNEYDVDMVILAVGF 289 (490)
T ss_dssp HHHHHHHHHHHT------TTCEEEETCCEEEEEC-SSSCCEEEE-SSCEEECSEEEECCCE
T ss_pred HHHHHHHHHHHh------CCeEEEeCCEEEEEEc-CCcEEEEEE-CCcEEECCEEEECCCC
Confidence 455566666655 4899999999999986 3444 3555 6778999999999865
No 148
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=89.32 E-value=0.56 Score=42.54 Aligned_cols=55 Identities=9% Similarity=0.087 Sum_probs=39.5
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEec---CCe--EEEEeCCCc----EEEcCEEEEecCh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQS---KNK--VIITTEDGS----VYHANYVIVTVSV 107 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~---~~~--v~V~~~~G~----~~~ad~VI~a~P~ 107 (307)
..+.+.|...... .+.+|+++++|++|+.. ++. +.|++.+|+ ++.||.||+|+..
T Consensus 127 ~~~~~~l~~~~~~------~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 127 MEFNDYLRWVASH------FQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHHHHHHHHHHTT------CTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHHH------cCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 3445555444433 47889999999999986 333 367766665 7899999999875
No 149
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=89.22 E-value=0.74 Score=42.71 Aligned_cols=57 Identities=14% Similarity=0.145 Sum_probs=45.8
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecC---CeEEEEeCCCcEEEcCEEEEecChh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSK---NKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~---~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
...+.+.|.+.+.+ .|.+++++++|++|+... +.+.|.+.+|+++.+|.||+|+...
T Consensus 266 ~~~l~~~l~~~~~~------~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 266 GQKLAGALKAHVSD------YDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp HHHHHHHHHHHHHT------SCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHHH------cCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCC
Confidence 34677777777765 588999999999998642 3688888889889999999999864
No 150
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=89.12 E-value=0.78 Score=39.07 Aligned_cols=54 Identities=7% Similarity=0.239 Sum_probs=43.2
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
..+.+.+.+.+.+ .+.++++++ |+.|+..++.+.| +.+|+++.+|.||+|+...
T Consensus 62 ~~~~~~~~~~~~~------~~~~~~~~~-v~~i~~~~~~~~v-~~~~~~~~~~~lv~AtG~~ 115 (320)
T 1trb_A 62 PLLMERMHEHATK------FETEIIFDH-INKVDLQNRPFRL-NGDNGEYTCDALIIATGAS 115 (320)
T ss_dssp HHHHHHHHHHHHH------TTCEEECCC-EEEEECSSSSEEE-EESSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHH------CCCEEEEee-eeEEEecCCEEEE-EeCCCEEEcCEEEECCCCC
Confidence 4667777766655 488999997 9999988888887 5677789999999998763
No 151
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=89.00 E-value=1.1 Score=38.48 Aligned_cols=56 Identities=7% Similarity=0.010 Sum_probs=40.7
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeC---CC--cEEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTE---DG--SVYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~---~G--~~~~ad~VI~a~P~~ 108 (307)
..+.+.|.+.+.+ .|.+|+++++|.+|+.+++...|.+. +| +++.+|.||+++...
T Consensus 191 ~~~~~~l~~~l~~------~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2zbw_A 191 EASVKELMKAHEE------GRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYI 251 (335)
T ss_dssp HHHHHHHHHHHHT------TSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHHHHhcccc------CCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCC
Confidence 4566667766665 48899999999999985432244443 66 568999999998753
No 152
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=88.92 E-value=0.58 Score=41.61 Aligned_cols=40 Identities=10% Similarity=0.228 Sum_probs=34.3
Q ss_pred CCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecCh
Q 021822 66 TDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
.+.+++++++|++|+.++. .|++.+|+++.||++|+|+..
T Consensus 75 ~~i~~~~~~~V~~id~~~~--~v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 75 NNIKVITSEFATSIDPNNK--LVTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp TTCEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCE
T ss_pred CCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEecCC
Confidence 3789999999999998765 456678889999999999975
No 153
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=88.90 E-value=0.78 Score=41.53 Aligned_cols=52 Identities=21% Similarity=0.387 Sum_probs=39.7
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeE-EEEeCCCcEEEcCEEEEecCh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKV-IITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VI~a~P~ 107 (307)
.+.+.|.+.+.+ .|.+|+++++|++|+.+ +++ .|.+ +|+++.+|.||+++..
T Consensus 192 ~~~~~l~~~l~~------~gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~d~vi~a~G~ 244 (447)
T 1nhp_A 192 EFTDVLTEEMEA------NNITIATGETVERYEGD-GRVQKVVT-DKNAYDADLVVVAVGV 244 (447)
T ss_dssp HHHHHHHHHHHT------TTEEEEESCCEEEEECS-SBCCEEEE-SSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHh------CCCEEEcCCEEEEEEcc-CcEEEEEE-CCCEEECCEEEECcCC
Confidence 455666666655 48899999999999976 443 4655 5568999999999975
No 154
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=88.59 E-value=0.85 Score=41.32 Aligned_cols=42 Identities=12% Similarity=0.194 Sum_probs=35.6
Q ss_pred CCeeecCCeeEEEEecCCeEEEEeC---CCcE--EEcCEEEEecChh
Q 021822 67 DPRLKLKKTVRKINQSKNKVIITTE---DGSV--YHANYVIVTVSVG 108 (307)
Q Consensus 67 g~~i~l~~~V~~I~~~~~~v~V~~~---~G~~--~~ad~VI~a~P~~ 108 (307)
|.+|+++++|++|+.+++++.|++. +|+. +.+|.||+|+...
T Consensus 330 ~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 330 RHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYE 376 (463)
T ss_dssp CSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEE
T ss_pred CeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCC
Confidence 7789999999999998888877766 6754 8999999999763
No 155
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=88.46 E-value=0.87 Score=38.48 Aligned_cols=58 Identities=16% Similarity=0.169 Sum_probs=41.8
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeE-EEEeC---------CC-----cEEEcCEEEEecChh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKV-IITTE---------DG-----SVYHANYVIVTVSVG 108 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v-~V~~~---------~G-----~~~~ad~VI~a~P~~ 108 (307)
...+.+.|.+.+.+. .|.+|+++++|++|..+++++ .|.+. +| .++.||.||+|+-..
T Consensus 118 ~~~~~~~l~~~~~~~-----~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~ 190 (284)
T 1rp0_A 118 AALFTSTIMSKLLAR-----PNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHD 190 (284)
T ss_dssp HHHHHHHHHHHHHTS-----TTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSS
T ss_pred HHHHHHHHHHHHHhc-----CCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCc
Confidence 456777777776531 378999999999999877754 34331 22 468999999998753
No 156
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=88.43 E-value=0.53 Score=40.34 Aligned_cols=41 Identities=0% Similarity=-0.014 Sum_probs=32.2
Q ss_pred CCeeecCCeeEEEEecCCeEE-EEeCC-----CcEEEcCEEEEecCh
Q 021822 67 DPRLKLKKTVRKINQSKNKVI-ITTED-----GSVYHANYVIVTVSV 107 (307)
Q Consensus 67 g~~i~l~~~V~~I~~~~~~v~-V~~~~-----G~~~~ad~VI~a~P~ 107 (307)
|.+|+++++|.+|+.+++++. |.+.+ ++++.+|.||++++.
T Consensus 223 gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 269 (338)
T 3itj_A 223 KIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGH 269 (338)
T ss_dssp TEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCE
T ss_pred CeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCC
Confidence 789999999999998876542 55443 356899999999876
No 157
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=88.39 E-value=0.43 Score=44.05 Aligned_cols=58 Identities=5% Similarity=0.014 Sum_probs=44.9
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEec---CCeEEEEe--C-CC--cEEEcCEEEEecChhhh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQS---KNKVIITT--E-DG--SVYHANYVIVTVSVGVL 110 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~---~~~v~V~~--~-~G--~~~~ad~VI~a~P~~~l 110 (307)
..+.+.|.+.+.+ .|.+|+++++|++|+.+ ++.+.|++ . +| +++.+|.||+|+.....
T Consensus 166 ~~l~~~L~~~~~~------~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 166 RQLQLLLLKVALL------LGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp HHHHHHHHHHHHH------TTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred HHHHHHHHHHHHh------CCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 6777788877765 48899999999999974 34567766 4 66 46899999999977543
No 158
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=88.34 E-value=0.88 Score=38.94 Aligned_cols=55 Identities=11% Similarity=0.183 Sum_probs=43.2
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEec--CCe-EEEEeCCCcEEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQS--KNK-VIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~--~~~-v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
..+.+.|.+.+.+ .|.+++. .+|++|+.. +++ +.|.+.+|+++.+|.||+|+...
T Consensus 65 ~~~~~~l~~~~~~------~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~ 122 (325)
T 2q7v_A 65 MELAQRMHQQAEK------FGAKVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGAD 122 (325)
T ss_dssp HHHHHHHHHHHHH------TTCEEEE-CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHH------cCCEEEe-eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 4677777777665 4788887 689999987 554 77777788889999999999763
No 159
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=88.08 E-value=0.59 Score=42.53 Aligned_cols=53 Identities=17% Similarity=0.191 Sum_probs=39.7
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCC--cEEEcCEEEEecChh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDG--SVYHANYVIVTVSVG 108 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G--~~~~ad~VI~a~P~~ 108 (307)
.+.+.|.+.+.+ .|.+|+++++|++|+. + ++.|+..+| +++.+|.||+++...
T Consensus 213 ~~~~~l~~~l~~------~gv~i~~~~~v~~i~~-~-~v~v~~~~G~~~~i~~D~vv~a~G~~ 267 (458)
T 1lvl_A 213 ELTAPVAESLKK------LGIALHLGHSVEGYEN-G-CLLANDGKGGQLRLEADRVLVAVGRR 267 (458)
T ss_dssp HHHHHHHHHHHH------HTCEEETTCEEEEEET-T-EEEEECSSSCCCEECCSCEEECCCEE
T ss_pred HHHHHHHHHHHH------CCCEEEECCEEEEEEe-C-CEEEEECCCceEEEECCEEEECcCCC
Confidence 455556665554 3899999999999997 4 376765456 579999999998763
No 160
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=87.93 E-value=0.79 Score=39.94 Aligned_cols=51 Identities=16% Similarity=0.253 Sum_probs=38.6
Q ss_pred HHHHHhhhccCCCCCCC-CeeecCCeeEEEEecCCeEEEEeCCCcEEE-cCEEEEecCh
Q 021822 51 HYIANQFLSHNNNKITD-PRLKLKKTVRKINQSKNKVIITTEDGSVYH-ANYVIVTVSV 107 (307)
Q Consensus 51 ~~L~~~~~~~~~~~~~g-~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~-ad~VI~a~P~ 107 (307)
+.|.+.+.+ .| .+|+++++|.+|+.+++++.|.+.+|+.+. +|.||+++..
T Consensus 218 ~~l~~~l~~------~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~ 270 (369)
T 3d1c_A 218 QRLGNVIKQ------GARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGF 270 (369)
T ss_dssp HHHHHHHHT------TCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCB
T ss_pred HHHHHHHhh------CCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeecc
Confidence 455555543 35 789999999999876777788888887664 6999998765
No 161
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=87.80 E-value=1.3 Score=41.08 Aligned_cols=57 Identities=7% Similarity=0.035 Sum_probs=43.4
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCe--EEEEeCCCcEEEcCEEEEecChhh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNK--VIITTEDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~--v~V~~~~G~~~~ad~VI~a~P~~~ 109 (307)
..+.+.|.+.+.+. .|.+|+.+ +|++|+.++++ +.|.+.+|+++.||.||.|.....
T Consensus 175 ~~l~~~L~~~a~~~-----~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 175 AKFSQLLTEHCTQK-----LGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp HHHHHHHHHHHHHT-----SCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred HHHHHHHHHHHHhc-----CCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcch
Confidence 46667777666541 28899999 69999987554 467777877899999999998753
No 162
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=87.55 E-value=1.1 Score=40.84 Aligned_cols=53 Identities=17% Similarity=0.315 Sum_probs=40.7
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecC-CeEEEEeC--CCc--EEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSK-NKVIITTE--DGS--VYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~-~~v~V~~~--~G~--~~~ad~VI~a~P~~ 108 (307)
..+.+.+.+.+ ..+|+++++|++|+.++ +++.|.+. +|+ ++.+|.||+++...
T Consensus 214 ~~~~~~l~~~l---------~v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~ 271 (466)
T 3l8k_A 214 QDIVNTLLSIL---------KLNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRR 271 (466)
T ss_dssp HHHHHHHHHHH---------CCCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEE
T ss_pred HHHHHHHHhcC---------EEEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCC
Confidence 44555555554 36799999999999877 78888877 675 78999999999753
No 163
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=87.42 E-value=1.2 Score=38.00 Aligned_cols=54 Identities=24% Similarity=0.334 Sum_probs=42.9
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
..+.+.|.+.+.+ .|.++++ .+|++|+..++.+.|.+ +|+++.+|.||+|+...
T Consensus 72 ~~~~~~~~~~~~~------~~v~~~~-~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~ 125 (319)
T 3cty_A 72 SELAKLFADHAAN------YAKIREG-VEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTT 125 (319)
T ss_dssp HHHHHHHHHHHHT------TSEEEET-CCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHH------cCCEEEE-eeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCC
Confidence 4677777777765 4778888 79999998888787877 56689999999999753
No 164
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=87.08 E-value=1.3 Score=42.22 Aligned_cols=56 Identities=20% Similarity=0.211 Sum_probs=44.1
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeE-EEEeCCCcEEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKV-IITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
..+.+.|.+.+.+. .|.+| ++.+|+.|..+++++ .|.+.+|+.+.||.||+|+...
T Consensus 123 ~~~~~~L~~~Le~~-----~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~ 179 (637)
T 2zxi_A 123 KRYREYMKKVCENQ-----ENLYI-KQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTF 179 (637)
T ss_dssp HHHHHHHHHHHHTC-----TTEEE-EESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTC
T ss_pred HHHHHHHHHHHHhC-----CCCEE-EEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCC
Confidence 45677777777541 26788 678999999887776 5888899889999999999864
No 165
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=87.07 E-value=1.4 Score=40.28 Aligned_cols=53 Identities=21% Similarity=0.373 Sum_probs=39.4
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeE-EEEeCCCcEEEcCEEEEecChh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKV-IITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
.+.+.|.+.+.+ .|.+|+++++|++|+.+ +++ .|.+. +.++.+|.||+++...
T Consensus 228 ~~~~~l~~~l~~------~Gv~i~~~~~v~~i~~~-~~v~~v~~~-~~~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 228 DMAEYIYKEADK------HHIEILTNENVKAFKGN-ERVEAVETD-KGTYKADLVLVSVGVK 281 (480)
T ss_dssp HHHHHHHHHHHH------TTCEEECSCCEEEEEES-SBEEEEEET-TEEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHH------cCcEEEcCCEEEEEEcC-CcEEEEEEC-CCEEEcCEEEECcCCC
Confidence 455666666655 48999999999999876 344 45554 4479999999998653
No 166
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=87.01 E-value=0.54 Score=42.35 Aligned_cols=55 Identities=16% Similarity=0.226 Sum_probs=39.2
Q ss_pred CHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCC--CcEEEcCEEEEecCh
Q 021822 45 GFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTED--GSVYHANYVIVTVSV 107 (307)
Q Consensus 45 G~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~--G~~~~ad~VI~a~P~ 107 (307)
|+..+.+.|.+.+.+ .|.+|+++++|++|+. +++.++..+ |+++.+|.||++++.
T Consensus 198 ~~~~~~~~l~~~l~~------~GV~i~~~~~v~~v~~--~~v~~~~~~~~g~~i~~D~vv~a~G~ 254 (430)
T 3h28_A 198 GIGASKRLVEDLFAE------RNIDWIANVAVKAIEP--DKVIYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp CSTTHHHHHHHHHHH------TTCEEECSCEEEEECS--SEEEEECTTSCEEEEECSEEEEECEE
T ss_pred cchHHHHHHHHHHHH------CCCEEEeCCEEEEEeC--CeEEEEecCCCceEEeeeEEEECCCC
Confidence 334455666666665 5899999999999974 345555422 567999999998654
No 167
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=86.99 E-value=0.86 Score=42.58 Aligned_cols=55 Identities=18% Similarity=0.269 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCC---C--cEEEcCEEEEecChhh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTED---G--SVYHANYVIVTVSVGV 109 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~---G--~~~~ad~VI~a~P~~~ 109 (307)
-..+-+.|.+.+.+ . |+++++|++|+.++++|+|++.+ | +++.||.||.|.-...
T Consensus 137 ~~~l~~~L~~~a~~------~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S 196 (549)
T 2r0c_A 137 QHWLAPLLAEAVGE------R---LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGASS 196 (549)
T ss_dssp HHHHHHHHHHHHGG------G---EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHHH------h---cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCCCc
Confidence 34667778888764 2 99999999999988888877654 6 4689999999987753
No 168
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=86.96 E-value=0.27 Score=42.49 Aligned_cols=41 Identities=22% Similarity=0.432 Sum_probs=30.3
Q ss_pred CCCCcEEEecccccCC---C-Cc-chhHHHHHHHHHHHHHHHHHhh
Q 021822 260 QPFGRIYFAGEHTNST---Y-LG-YVDGAYFSGINTANALIKCLKH 300 (307)
Q Consensus 260 ~p~~~l~~aGd~~~~~---~-~g-~~egAv~SG~~aA~~il~~l~~ 300 (307)
+..++||.|||..... + .| +.-+++.||++||+.|++.|++
T Consensus 281 t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~laa 326 (326)
T 3fpz_A 281 AGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFAA 326 (326)
T ss_dssp TTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHHC
T ss_pred ECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhcC
Confidence 3457999999975421 1 23 4556789999999999999864
No 169
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=86.78 E-value=0.87 Score=39.64 Aligned_cols=42 Identities=17% Similarity=0.266 Sum_probs=32.8
Q ss_pred CCCeeecCCeeEEEEecCCeE-EEEe--CCC--cEEEcCEEEEecCh
Q 021822 66 TDPRLKLKKTVRKINQSKNKV-IITT--EDG--SVYHANYVIVTVSV 107 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~~~~v-~V~~--~~G--~~~~ad~VI~a~P~ 107 (307)
.|.+|+++++|++|+.+++++ .|.+ .+| +.+.+|.||+++..
T Consensus 215 ~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~ 261 (360)
T 3ab1_A 215 GTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGF 261 (360)
T ss_dssp TSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCB
T ss_pred CceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCC
Confidence 368899999999999876653 3444 477 46899999999875
No 170
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=86.73 E-value=1.4 Score=41.50 Aligned_cols=56 Identities=14% Similarity=0.175 Sum_probs=43.4
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEec-CCeE-EEEe---CCCc--EEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQS-KNKV-IITT---EDGS--VYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~-~~~v-~V~~---~~G~--~~~ad~VI~a~P~~ 108 (307)
..+.+.|.+.+.+ .|.+|+++++|++|..+ ++++ .|.. .+|+ .+.|+.||+|+...
T Consensus 143 ~~l~~~L~~~~~~------~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 143 HALLHTLYQQNLK------NHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HHHHHHHHHHHHH------TTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHh------CCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 5788889888876 58999999999999986 5543 2332 4675 58899999999764
No 171
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=86.59 E-value=1.5 Score=41.69 Aligned_cols=57 Identities=12% Similarity=0.166 Sum_probs=44.2
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeE-EEEe---CCCc--EEEcCEEEEecChhh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKV-IITT---EDGS--VYHANYVIVTVSVGV 109 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v-~V~~---~~G~--~~~ad~VI~a~P~~~ 109 (307)
..|.+.|.+.+.+ .|.+|+.+++|++|..+++++ .|.. .+|+ .+.|+.||+|+....
T Consensus 155 ~~l~~~L~~~~~~------~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 155 HSLLHTLYGRSLR------YDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHHTT------SCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHh------CCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 4788999988876 589999999999999876653 2332 4675 589999999997643
No 172
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=86.36 E-value=1.1 Score=37.86 Aligned_cols=41 Identities=20% Similarity=0.320 Sum_probs=32.1
Q ss_pred CCeeecCCeeEEEEecCCeEEEEeCC---Cc--EEEcCEEEEecCh
Q 021822 67 DPRLKLKKTVRKINQSKNKVIITTED---GS--VYHANYVIVTVSV 107 (307)
Q Consensus 67 g~~i~l~~~V~~I~~~~~~v~V~~~~---G~--~~~ad~VI~a~P~ 107 (307)
|.+++++++|++|+.+++...|.+.+ |+ ++.+|.||++++.
T Consensus 204 gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 249 (323)
T 3f8d_A 204 NVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGF 249 (323)
T ss_dssp TEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECC
Confidence 78999999999999875444455544 75 6899999999875
No 173
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=86.26 E-value=1.1 Score=41.39 Aligned_cols=55 Identities=16% Similarity=0.248 Sum_probs=39.9
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCc----EEEcCEEEEecCh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGS----VYHANYVIVTVSV 107 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~----~~~ad~VI~a~P~ 107 (307)
..+.+.+.+.+++ .|.+|++|++|++|+.+.-...+...+|+ ++.||.||.|+..
T Consensus 272 ~~~~~~~~~~L~~------~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 272 KKLSSYAQSHLEN------TSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp HHHHHHHHHHHHH------TTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred HHHHHHHHHHHHh------cceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCC
Confidence 4566666666666 59999999999999754333445556663 5899999998753
No 174
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=86.12 E-value=0.94 Score=38.62 Aligned_cols=42 Identities=7% Similarity=0.054 Sum_probs=32.4
Q ss_pred CCCeeecCCeeEEEEecCCeEEEEeCC-----CcEEEcCEEEEecCh
Q 021822 66 TDPRLKLKKTVRKINQSKNKVIITTED-----GSVYHANYVIVTVSV 107 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~~~~v~V~~~~-----G~~~~ad~VI~a~P~ 107 (307)
.|.+++++++|.+|+.+++...|.+.+ ++++.+|.||++++.
T Consensus 202 ~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 248 (332)
T 3lzw_A 202 SKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGF 248 (332)
T ss_dssp SSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCE
T ss_pred CCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeecc
Confidence 388999999999999876654454443 346899999999875
No 175
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=85.59 E-value=1.5 Score=40.09 Aligned_cols=55 Identities=15% Similarity=0.172 Sum_probs=40.2
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecC-CeEEEEeCC---Cc--EEEcCEEEEecCh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSK-NKVIITTED---GS--VYHANYVIVTVSV 107 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~-~~v~V~~~~---G~--~~~ad~VI~a~P~ 107 (307)
..+.+.+.+.+.+ .|.+|+++++|++|+..+ +.+.|.+.+ |+ ++.+|.||+++..
T Consensus 225 ~~~~~~l~~~l~~------~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~ 285 (488)
T 3dgz_A 225 QQMSSLVTEHMES------HGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGR 285 (488)
T ss_dssp HHHHHHHHHHHHH------TTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHH------CCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccC
Confidence 3556666666665 489999999999998754 446665543 54 4789999999865
No 176
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=85.54 E-value=1.2 Score=37.57 Aligned_cols=42 Identities=19% Similarity=0.195 Sum_probs=33.0
Q ss_pred CCCeeecCCeeEEEEecCCe---EEEEeCCCc--EEEcCEEEEecCh
Q 021822 66 TDPRLKLKKTVRKINQSKNK---VIITTEDGS--VYHANYVIVTVSV 107 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~~~~---v~V~~~~G~--~~~ad~VI~a~P~ 107 (307)
.|.+|+++++|.+|+.++++ +.+...+|+ ++.+|.||+++..
T Consensus 196 ~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 196 EKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGL 242 (315)
T ss_dssp TTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCE
T ss_pred CCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcC
Confidence 48899999999999987755 334434775 6889999999875
No 177
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=85.36 E-value=1.3 Score=42.31 Aligned_cols=58 Identities=16% Similarity=0.178 Sum_probs=44.6
Q ss_pred HHHHHHHHHHhhhccCCCCCCCC--eeecCCeeEEEEecCC----eEEEEeC------CC--cEEEcCEEEEecChhh
Q 021822 46 FETVVHYIANQFLSHNNNKITDP--RLKLKKTVRKINQSKN----KVIITTE------DG--SVYHANYVIVTVSVGV 109 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~--~i~l~~~V~~I~~~~~----~v~V~~~------~G--~~~~ad~VI~a~P~~~ 109 (307)
-..+.+.|.+.+.+ .|. +|+++++|++|+.+++ ++.|++. +| +++.||.||.|.....
T Consensus 140 q~~l~~~L~~~a~~------~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 140 QARVHDHYLERMRN------SPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARS 211 (639)
T ss_dssp HHHHHHHHHHHHHH------STTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHHh------CCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcch
Confidence 45777788888776 466 9999999999998753 5777654 46 4689999999987753
No 178
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=85.31 E-value=1.4 Score=41.95 Aligned_cols=57 Identities=14% Similarity=0.190 Sum_probs=43.7
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeE-EEEeCCCcEEEcCEEEEecChhh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKV-IITTEDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VI~a~P~~~ 109 (307)
..+.+.|.+.+.+. .|.+| ++.+|+.|..+++++ .|.+.+|.++.||.||+|+....
T Consensus 124 ~~~~~~L~e~Le~~-----~GV~I-~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 124 VLYRQAVRTALENQ-----PNLMI-FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHHHHHHHTC-----TTEEE-EECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred HHHHHHHHHHHHhC-----CCCEE-EEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 35667777766541 26788 678999999877765 68888888899999999998753
No 179
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=84.99 E-value=1.7 Score=41.57 Aligned_cols=56 Identities=16% Similarity=0.231 Sum_probs=43.3
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeE---EEE-eCCCc--EEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKV---IIT-TEDGS--VYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v---~V~-~~~G~--~~~ad~VI~a~P~~ 108 (307)
..|.+.|.+.+.+ .|.+|+.+++|++|..+++++ .+. +.+|+ .+.||.||+|+...
T Consensus 158 ~~l~~~L~~~a~~------~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 219 (660)
T 2bs2_A 158 HTMLFAVANECLK------LGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGY 219 (660)
T ss_dssp HHHHHHHHHHHHH------HTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHh------CCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcc
Confidence 4788889888776 489999999999998876643 332 25675 48999999999764
No 180
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=84.51 E-value=1.7 Score=41.07 Aligned_cols=56 Identities=16% Similarity=0.105 Sum_probs=43.6
Q ss_pred HHHHHHHHHhhhccCCCCCCC-CeeecCCeeEEEEecCCeE---EEE-eCCCc--EEEcCEEEEecChh
Q 021822 47 ETVVHYIANQFLSHNNNKITD-PRLKLKKTVRKINQSKNKV---IIT-TEDGS--VYHANYVIVTVSVG 108 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g-~~i~l~~~V~~I~~~~~~v---~V~-~~~G~--~~~ad~VI~a~P~~ 108 (307)
..|.+.|.+.+.+ .| .+|+.+++|++|..+++++ .+. +.+|+ .+.|+.||+|+-..
T Consensus 134 ~~l~~~L~~~~~~------~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 196 (602)
T 1kf6_A 134 FHMLHTLFQTSLQ------FPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGA 196 (602)
T ss_dssp HHHHHHHHHHHTT------CTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCC
T ss_pred HHHHHHHHHHHHh------CCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCC
Confidence 4788889888865 46 8999999999999877653 233 35776 58999999999764
No 181
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=84.23 E-value=1.6 Score=36.49 Aligned_cols=50 Identities=10% Similarity=0.058 Sum_probs=37.1
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecCh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
.+.+.+.+.+.+ .|.+|+. ++|++|+.++ .|.+.+|+++.+|.||++++.
T Consensus 175 ~~~~~~~~~l~~------~gv~i~~-~~v~~i~~~~---~v~~~~g~~~~~D~vi~a~G~ 224 (297)
T 3fbs_A 175 EPDADQHALLAA------RGVRVET-TRIREIAGHA---DVVLADGRSIALAGLFTQPKL 224 (297)
T ss_dssp CCCHHHHHHHHH------TTCEEEC-SCEEEEETTE---EEEETTSCEEEESEEEECCEE
T ss_pred CCCHHHHHHHHH------CCcEEEc-ceeeeeecCC---eEEeCCCCEEEEEEEEEccCc
Confidence 344445555544 4888985 9999998653 677789989999999999865
No 182
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=83.45 E-value=2.1 Score=36.18 Aligned_cols=42 Identities=10% Similarity=0.050 Sum_probs=32.2
Q ss_pred CCCeeecCCeeEEEEecCCeE-EEEeC---CCc--EEEcCEEEEecCh
Q 021822 66 TDPRLKLKKTVRKINQSKNKV-IITTE---DGS--VYHANYVIVTVSV 107 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~~~~v-~V~~~---~G~--~~~ad~VI~a~P~ 107 (307)
.|.+|+++++|++|+.+++++ .|.+. +|+ ++.+|.||+++..
T Consensus 192 ~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 192 DKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGY 239 (311)
T ss_dssp TTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred CCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecC
Confidence 378899999999999875553 34443 665 6899999998865
No 183
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=83.38 E-value=2 Score=36.59 Aligned_cols=42 Identities=17% Similarity=0.223 Sum_probs=31.6
Q ss_pred CCCeeecCCeeEEEEecCCeE-EEEeC---CCc--EEEcCEEEEecCh
Q 021822 66 TDPRLKLKKTVRKINQSKNKV-IITTE---DGS--VYHANYVIVTVSV 107 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~~~~v-~V~~~---~G~--~~~ad~VI~a~P~ 107 (307)
.|.+|+++++|++|..+++++ .|.+. +|+ ++.+|.||+++..
T Consensus 203 ~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 203 RNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGL 250 (319)
T ss_dssp TTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCE
T ss_pred CCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCC
Confidence 388999999999999875532 34433 665 5899999999854
No 184
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=83.35 E-value=2 Score=38.56 Aligned_cols=40 Identities=20% Similarity=0.246 Sum_probs=32.4
Q ss_pred CCCeeecCCeeEEEEecCCeEEEEeCCC--cEEEcCEEEEecCh
Q 021822 66 TDPRLKLKKTVRKINQSKNKVIITTEDG--SVYHANYVIVTVSV 107 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~~~~v~V~~~~G--~~~~ad~VI~a~P~ 107 (307)
.|.++++++.|++|+ .+++.+...+| +++.+|.||++++.
T Consensus 213 ~GV~~~~~~~v~~v~--~~~~~~~~~~g~~~~i~~d~vi~~~G~ 254 (430)
T 3hyw_A 213 RNIDWIANVAVKAIE--PDKVIYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp TTCEEECSCEEEEEC--SSEEEEECTTSCEEEEECSEEEEECEE
T ss_pred CCeEEEeCceEEEEe--CCceEEEeeCCCceEeecceEEEeccC
Confidence 489999999999997 45677776665 46899999999865
No 185
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=82.82 E-value=2.1 Score=40.81 Aligned_cols=55 Identities=18% Similarity=0.222 Sum_probs=42.0
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEE-EEeCCCcEEEcCEEEEecChh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVI-ITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~a~P~~ 108 (307)
.+.+.|.+.+.+. .|.+| ++..|+.|..+++++. |.+.+|+++.||.||+|+...
T Consensus 118 ~l~~~L~~~l~~~-----~GV~I-~~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 118 QYSLYMRRIVEHE-----PNIDL-LQDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTF 173 (641)
T ss_dssp HHHHHHHHHHHTC-----TTEEE-EECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHhC-----CCCEE-EeeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCC
Confidence 5666666666531 26677 4669999988888775 888889889999999999764
No 186
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=82.15 E-value=2.2 Score=38.45 Aligned_cols=52 Identities=21% Similarity=0.360 Sum_probs=36.4
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecCh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
.+.+.+.+.+.+ . .+++++++|.+|+.++ ++.+...+|+++.+|.||+++..
T Consensus 191 ~~~~~l~~~l~~------~-v~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~Vv~a~G~ 242 (449)
T 3kd9_A 191 EVTDILEEKLKK------H-VNLRLQEITMKIEGEE-RVEKVVTDAGEYKAELVILATGI 242 (449)
T ss_dssp HHHHHHHHHHTT------T-SEEEESCCEEEEECSS-SCCEEEETTEEEECSEEEECSCE
T ss_pred HHHHHHHHHHHh------C-cEEEeCCeEEEEeccC-cEEEEEeCCCEEECCEEEEeeCC
Confidence 344445555543 3 6899999999998765 44323446778999999999865
No 187
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=81.84 E-value=1.6 Score=36.78 Aligned_cols=53 Identities=15% Similarity=0.061 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecC--CeEEEEe-CCCcEEEcCEEEEecCh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSK--NKVIITT-EDGSVYHANYVIVTVSV 107 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~--~~v~V~~-~~G~~~~ad~VI~a~P~ 107 (307)
...+.+.+.+.+.+ .+.+++++ +|++| .++ +.+.|+. .++ ++.+|+||+|+..
T Consensus 61 ~~~~~~~~~~~~~~------~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~ 116 (315)
T 3r9u_A 61 GISFMAPWSEQCMR------FGLKHEMV-GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGS 116 (315)
T ss_dssp HHHHHHHHHHHHTT------TCCEEECC-CEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHH------cCcEEEEE-EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCC
Confidence 35788888887765 58899998 99999 666 6777422 234 8999999999876
No 188
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=81.63 E-value=2.9 Score=35.64 Aligned_cols=41 Identities=10% Similarity=0.142 Sum_probs=30.8
Q ss_pred CCeeecCCeeEEEEecCCeEEEEeC---CCc--EEEcCEEEEecCh
Q 021822 67 DPRLKLKKTVRKINQSKNKVIITTE---DGS--VYHANYVIVTVSV 107 (307)
Q Consensus 67 g~~i~l~~~V~~I~~~~~~v~V~~~---~G~--~~~ad~VI~a~P~ 107 (307)
|.+|+++++|++|..++....|.+. +|+ ++.+|.||+++..
T Consensus 202 gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 247 (325)
T 2q7v_A 202 KMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGH 247 (325)
T ss_dssp TEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred CceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCC
Confidence 7899999999999975432234443 675 6899999999854
No 189
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=81.51 E-value=1.7 Score=38.27 Aligned_cols=49 Identities=14% Similarity=0.228 Sum_probs=37.5
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecCh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
.+.+.+.+.+.+ .|.+|+++++|++|+ .+ .|.+.+|+ +.+|.||+++..
T Consensus 184 ~~~~~l~~~l~~------~gV~i~~~~~v~~i~--~~--~v~~~~g~-i~~D~vi~a~G~ 232 (367)
T 1xhc_A 184 ELSNMIKDMLEE------TGVKFFLNSELLEAN--EE--GVLTNSGF-IEGKVKICAIGI 232 (367)
T ss_dssp HHHHHHHHHHHH------TTEEEECSCCEEEEC--SS--EEEETTEE-EECSCEEEECCE
T ss_pred HHHHHHHHHHHH------CCCEEEcCCEEEEEE--ee--EEEECCCE-EEcCEEEECcCC
Confidence 455566666655 489999999999998 23 35667887 999999999865
No 190
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=81.20 E-value=3.9 Score=34.49 Aligned_cols=55 Identities=22% Similarity=0.207 Sum_probs=39.9
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecC-CeEEEEeCCCcEEEcCEEEEecCh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSK-NKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~-~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
..+.+.+.+.+.+ .+....++..|..+...+ +.+.|.+.+|+++.||+||+|+-.
T Consensus 60 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs 115 (304)
T 4fk1_A 60 EEFKEIGLNEVMK------YPSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGM 115 (304)
T ss_dssp HHHHHHHHHHHTT------STTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHh------cCCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCC
Confidence 4566666666554 345566667777777654 457888899999999999999975
No 191
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=80.74 E-value=2 Score=38.77 Aligned_cols=49 Identities=22% Similarity=0.308 Sum_probs=36.9
Q ss_pred HHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecCh
Q 021822 49 VVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 49 l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
+.+.+.+.+.+ .|.+++++++|++++.. .|.+.+|+++.+|.||+++..
T Consensus 190 ~~~~~~~~l~~------~gV~i~~~~~v~~~~~~----~v~~~~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 190 MNQPILDELDK------REIPYRLNEEINAINGN----EITFKSGKVEHYDMIIEGVGT 238 (437)
T ss_dssp GGHHHHHHHHH------TTCCEEESCCEEEEETT----EEEETTSCEEECSEEEECCCE
T ss_pred hHHHHHHHhhc------cceEEEeccEEEEecCC----eeeecCCeEEeeeeEEEEece
Confidence 34444555544 48899999999998743 366788999999999999864
No 192
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=80.72 E-value=1.9 Score=36.55 Aligned_cols=43 Identities=21% Similarity=0.270 Sum_probs=33.5
Q ss_pred HhhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHhh
Q 021822 257 DLQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLKH 300 (307)
Q Consensus 257 ~~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~~ 300 (307)
.+++..++||-|||-...+ +..+..|+..|+.||..|.+.|+.
T Consensus 265 ~~~Ts~pgIyA~GDv~~~~-~~~~~~A~~~G~~AA~~i~~~L~~ 307 (312)
T 4gcm_A 265 DMTTSVPGIFAAGDVRDKG-LRQIVTATGDGSIAAQSAAEYIEH 307 (312)
T ss_dssp TSBCSSTTEEECSTTBSCS-CCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCEEEEeecCCCc-chHHHHHHHHHHHHHHHHHHHHHh
Confidence 4455668999999977542 335778999999999999887765
No 193
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=79.51 E-value=1.5 Score=40.12 Aligned_cols=55 Identities=11% Similarity=0.084 Sum_probs=40.8
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeE-EEEe--CCCcEEEcCEEEEecChhh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKV-IITT--EDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v-~V~~--~~G~~~~ad~VI~a~P~~~ 109 (307)
..+.+.|.+.+.+ .|.+|+.+++| +|..+++++ .|.. .+| .+.+|.||+|+....
T Consensus 119 ~~l~~~L~~~~~~------~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g-~~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 119 REIFNFLLKLARE------EGIPIIEDRLV-EIRVKDGKVTGFVTEKRGL-VEDVDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHHHHHHH------TTCCEECCCEE-EEEEETTEEEEEEETTTEE-ECCCSEEEECCCCCG
T ss_pred HHHHHHHHHHHHh------CCCEEEECcEE-EEEEeCCEEEEEEEEeCCC-eEEeeeEEECCCCCc
Confidence 4677888877754 48999999999 998877765 2333 334 577999999987643
No 194
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=78.97 E-value=2.2 Score=35.96 Aligned_cols=42 Identities=14% Similarity=0.097 Sum_probs=33.6
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHhh
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLKH 300 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~~ 300 (307)
+++..++||.+||-.... ...+..|+..|..||..|++.+..
T Consensus 265 ~~t~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~ 306 (310)
T 1fl2_A 265 CETNVKGVFAAGDCTTVP-YKQIIIATGEGAKASLSAFDYLIR 306 (310)
T ss_dssp CBCSSTTEEECSTTBSCS-SCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEeecccCCc-chhhhhhHhhHHHHHHHHHHHHHH
Confidence 344457999999987752 245778999999999999998876
No 195
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=78.26 E-value=2.8 Score=38.63 Aligned_cols=55 Identities=9% Similarity=0.071 Sum_probs=39.3
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecC--------CeEEEEeCCC-----cEEEcCEEEEecCh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSK--------NKVIITTEDG-----SVYHANYVIVTVSV 107 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~--------~~v~V~~~~G-----~~~~ad~VI~a~P~ 107 (307)
.++.+.|...... ++..|+++++|++|+..+ +.|+|++.++ +++.|+.||+++..
T Consensus 145 ~E~~~Yl~~~A~~------~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 145 LEFEDYMRWCAQQ------FSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHHHT------TGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHH------cCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 4666666554443 466799999999998643 2477877543 35789999999974
No 196
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=78.13 E-value=1.7 Score=35.29 Aligned_cols=36 Identities=19% Similarity=0.146 Sum_probs=30.2
Q ss_pred CCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHh
Q 021822 261 PFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLK 299 (307)
Q Consensus 261 p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~ 299 (307)
..++||.+||.. . .|....|+++|+.+|..|+++++
T Consensus 197 ~~p~iya~G~~a-~--~g~~~~~~~~g~~~a~~i~~~l~ 232 (232)
T 2cul_A 197 RLEGLYAVGLCV-R--EGDYARMSEEGKRLAEHLLHELG 232 (232)
T ss_dssp TSBSEEECGGGT-S--CCCHHHHHHHHHHHHHHHHHHC-
T ss_pred ccccceeeeecc-c--CccHHHHHHHHHHHHHHHHhhcC
Confidence 457999999988 4 46788899999999999998763
No 197
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=77.87 E-value=1.9 Score=41.46 Aligned_cols=49 Identities=8% Similarity=0.108 Sum_probs=35.4
Q ss_pred HHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEe---CCCcEEEcCEEEEecCh
Q 021822 51 HYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITT---EDGSVYHANYVIVTVSV 107 (307)
Q Consensus 51 ~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~---~~G~~~~ad~VI~a~P~ 107 (307)
+.|.+.+.+ .|.+|+++++|++|+.+ ++.+.. .+++++.+|.||+++..
T Consensus 571 ~~l~~~l~~------~GV~i~~~~~V~~i~~~--~~~v~~~~~~~~~~i~aD~VV~A~G~ 622 (690)
T 3k30_A 571 NRIQRRLIE------NGVARVTDHAVVAVGAG--GVTVRDTYASIERELECDAVVMVTAR 622 (690)
T ss_dssp HHHHHHHHH------TTCEEEESEEEEEEETT--EEEEEETTTCCEEEEECSEEEEESCE
T ss_pred HHHHHHHHH------CCCEEEcCcEEEEEECC--eEEEEEccCCeEEEEECCEEEECCCC
Confidence 444455544 48999999999999854 444443 24557899999999876
No 198
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=77.05 E-value=2.8 Score=37.69 Aligned_cols=53 Identities=13% Similarity=0.151 Sum_probs=36.9
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEe--CC-----CcEEEcCEEEEecCh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITT--ED-----GSVYHANYVIVTVSV 107 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~--~~-----G~~~~ad~VI~a~P~ 107 (307)
..+.+.+.+.+.+ .|.+++++++|++|+. +++.+.. .+ ++++.+|.||++++.
T Consensus 208 ~~~~~~~~~~l~~------~gI~~~~~~~v~~v~~--~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 208 GDSKGILTKGLKE------EGIEAYTNCKVTKVED--NKMYVTQVDEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp TTHHHHHHHHHHH------TTCEEECSEEEEEEET--TEEEEEEECTTSCEEEEEEEECSEEEEECCE
T ss_pred hHHHHHHHHHHHH------CCCEEEcCCEEEEEEC--CeEEEEecccCCccccceEEEEeEEEEcCCC
Confidence 3445555555555 4899999999999974 4555543 33 456899999998653
No 199
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=76.87 E-value=2.2 Score=36.53 Aligned_cols=42 Identities=5% Similarity=0.012 Sum_probs=32.7
Q ss_pred hhCCCCcEEEec--ccccCCCCcchhHHHHHHHHHHHHHHHHHhh
Q 021822 258 LQQPFGRIYFAG--EHTNSTYLGYVDGAYFSGINTANALIKCLKH 300 (307)
Q Consensus 258 ~~~p~~~l~~aG--d~~~~~~~g~~egAv~SG~~aA~~il~~l~~ 300 (307)
+.+..++||.+| |...+ .++.+.+|+..|+.+|..|.+.+..
T Consensus 310 ~~t~~~~vya~Gd~d~~~~-~~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 310 RALAVPSVWLLGYGDWNGM-ASATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp BBSSCTTEEECSSCGGGST-TCSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred cCCCCCCeEEecccccccc-chhhhhhhHHHHHHHHHHHHHHHHh
Confidence 445568999999 54443 3567889999999999999998865
No 200
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=76.71 E-value=4 Score=36.32 Aligned_cols=40 Identities=10% Similarity=0.203 Sum_probs=33.4
Q ss_pred CCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecCh
Q 021822 66 TDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
.|.+++++++|++|+..+. .|++.+|+++.+|++|+|+..
T Consensus 72 ~~v~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~ 111 (408)
T 2gqw_A 72 PEVEWLLGVTAQSFDPQAH--TVALSDGRTLPYGTLVLATGA 111 (408)
T ss_dssp CSCEEEETCCEEEEETTTT--EEEETTSCEEECSEEEECCCE
T ss_pred CCCEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCC
Confidence 4789999999999997654 455678888999999999976
No 201
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=76.68 E-value=3.7 Score=36.56 Aligned_cols=41 Identities=12% Similarity=0.258 Sum_probs=34.1
Q ss_pred CCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChh
Q 021822 66 TDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
.+.+++++++|++|+.... .|.+.+|+++.+|++|+|+...
T Consensus 70 ~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 70 ARIDMLTGPEVTALDVQTR--TISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp TTCEEEESCCEEEEETTTT--EEEETTSCEEECSEEEECCCEE
T ss_pred CCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEccCCc
Confidence 3789999999999997765 4566788889999999999753
No 202
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=76.15 E-value=2.3 Score=39.07 Aligned_cols=40 Identities=15% Similarity=0.204 Sum_probs=33.4
Q ss_pred CCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecCh
Q 021822 66 TDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
.|.+++++++|++|+..+. .|++.+|+++.||++|+|+..
T Consensus 103 ~gv~~~~g~~v~~id~~~~--~V~~~~g~~i~yd~lviATGs 142 (493)
T 1m6i_A 103 GGVAVLTGKKVVQLDVRDN--MVKLNDGSQITYEKCLIATGG 142 (493)
T ss_dssp CEEEEEETCCEEEEEGGGT--EEEETTSCEEEEEEEEECCCE
T ss_pred CCeEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCC
Confidence 3678999999999998754 455678888999999999975
No 203
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=76.10 E-value=4.2 Score=37.07 Aligned_cols=41 Identities=15% Similarity=0.273 Sum_probs=35.1
Q ss_pred CCeeecCCeeEEEEecCCeEEEEe-CCCc--EEEcCEEEEecCh
Q 021822 67 DPRLKLKKTVRKINQSKNKVIITT-EDGS--VYHANYVIVTVSV 107 (307)
Q Consensus 67 g~~i~l~~~V~~I~~~~~~v~V~~-~~G~--~~~ad~VI~a~P~ 107 (307)
|.+++++++|+.|+..++.+.+.. .+|+ ++.||.+|+|+-.
T Consensus 107 gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~ 150 (480)
T 3cgb_A 107 GIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGV 150 (480)
T ss_dssp CCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCC
Confidence 788999999999998888888876 4576 6899999999975
No 204
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=76.03 E-value=3.3 Score=37.19 Aligned_cols=39 Identities=15% Similarity=0.235 Sum_probs=33.1
Q ss_pred CCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecCh
Q 021822 67 DPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 67 g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
|.+++++++|+.|+..+. .|.+.+|+++.||.+|+|+..
T Consensus 74 gv~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~ 112 (431)
T 1q1r_A 74 NIQLLGGTQVTAINRDRQ--QVILSDGRALDYDRLVLATGG 112 (431)
T ss_dssp TEEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEcCCC
Confidence 778999999999998665 455578888999999999976
No 205
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=75.09 E-value=2.5 Score=35.77 Aligned_cols=43 Identities=23% Similarity=0.089 Sum_probs=33.1
Q ss_pred HhhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHhh
Q 021822 257 DLQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLKH 300 (307)
Q Consensus 257 ~~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~~ 300 (307)
.+++..++||-|||-...+ +..+..|+..|..||..|.+.|..
T Consensus 259 ~~~Ts~p~IyA~GDv~~~~-~~~~~~A~~~G~~AA~~i~~~L~~ 301 (304)
T 4fk1_A 259 FGRTSEKNIYLAGETTTQG-PSSLIIAASQGNKAAIAINSDITD 301 (304)
T ss_dssp TCBCSSTTEEECSHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCEEEEeccCCCc-chHHHHHHHHHHHHHHHHHHHHhh
Confidence 3455668999999977543 234667999999999999988764
No 206
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=74.76 E-value=5.2 Score=37.13 Aligned_cols=41 Identities=17% Similarity=0.289 Sum_probs=34.1
Q ss_pred CCeeecCCeeEEEEecCCeEEEEe-CCCc--EEEcCEEEEecCh
Q 021822 67 DPRLKLKKTVRKINQSKNKVIITT-EDGS--VYHANYVIVTVSV 107 (307)
Q Consensus 67 g~~i~l~~~V~~I~~~~~~v~V~~-~~G~--~~~ad~VI~a~P~ 107 (307)
+.+++++++|++|+..++.+.+.. .+|+ ++.+|+||+|+..
T Consensus 72 ~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~ 115 (565)
T 3ntd_A 72 NVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGA 115 (565)
T ss_dssp CCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCC
Confidence 678999999999999888888775 2343 6899999999876
No 207
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=74.75 E-value=3 Score=37.42 Aligned_cols=39 Identities=15% Similarity=0.324 Sum_probs=31.4
Q ss_pred CCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChh
Q 021822 67 DPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 67 g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
|.+++.+ +|++|+.+++. |++.+|+++.||++|+|+-..
T Consensus 70 gv~~i~~-~v~~Id~~~~~--V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 70 NIEFINE-KAESIDPDANT--VTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp TEEEECS-CEEEEETTTTE--EEETTCCEEECSEEEECCCCE
T ss_pred CcEEEEe-EEEEEECCCCE--EEECCCCEEECCEEEEeCCCC
Confidence 6677665 79999987764 556789899999999999864
No 208
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=74.15 E-value=3.7 Score=37.30 Aligned_cols=43 Identities=16% Similarity=0.129 Sum_probs=35.1
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHhhhh
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLKHFC 302 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~~~~ 302 (307)
+++..++||.+||-... +..+..|+..|+.||..|...|....
T Consensus 405 ~~Ts~~~VfA~GD~~~g--~~~v~~A~~~G~~aA~~i~~~L~~~~ 447 (456)
T 2vdc_G 405 KMTNMDGVFAAGDIVRG--ASLVVWAIRDGRDAAEGIHAYAKAKA 447 (456)
T ss_dssp CBCSSTTEEECGGGGSS--CCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEeccccCC--chHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 34455799999998764 46788999999999999999987744
No 209
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=73.73 E-value=3.3 Score=37.91 Aligned_cols=41 Identities=12% Similarity=0.183 Sum_probs=33.4
Q ss_pred CCeeecCCeeEEEEecCCeEEEE-eCCCcEEEcCEEEEecCh
Q 021822 67 DPRLKLKKTVRKINQSKNKVIIT-TEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 67 g~~i~l~~~V~~I~~~~~~v~V~-~~~G~~~~ad~VI~a~P~ 107 (307)
|.+++++++|+.|+..++.+.|. ..+++++.||++|+|+..
T Consensus 106 gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~ 147 (490)
T 2bc0_A 106 GAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGS 147 (490)
T ss_dssp TCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCC
Confidence 77899999999999888777776 322356899999999975
No 210
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=73.67 E-value=4.5 Score=31.04 Aligned_cols=39 Identities=23% Similarity=0.215 Sum_probs=31.2
Q ss_pred CCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHhh
Q 021822 261 PFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLKH 300 (307)
Q Consensus 261 p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~~ 300 (307)
..++||.+||-.... ......|+..|..||..|+..+..
T Consensus 134 ~~~~i~a~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~~~~ 172 (180)
T 2ywl_A 134 SYPRVYAAGVARGKV-PGHAIISAGDGAYVAVHLVSDLRG 172 (180)
T ss_dssp SSTTEEECGGGGTCC-SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEeecccCcc-hhhHHHHHHhHHHHHHHHHHHhhh
Confidence 346899999987763 235778999999999999988765
No 211
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=73.38 E-value=4.3 Score=34.54 Aligned_cols=41 Identities=17% Similarity=0.105 Sum_probs=33.4
Q ss_pred hCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHhh
Q 021822 259 QQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLKH 300 (307)
Q Consensus 259 ~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~~ 300 (307)
++..++||.+||-.... +.....|+..|..||..|.+.+..
T Consensus 284 ~t~~~~vya~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~l~~ 324 (333)
T 1vdc_A 284 QTSVPGVFAAGDVQDKK-YRQAITAAGTGCMAALDAEHYLQE 324 (333)
T ss_dssp BCSSTTEEECGGGGCSS-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEeeeccCCC-chhHHHHHHhHHHHHHHHHHHHHh
Confidence 34457999999987752 346778999999999999999876
No 212
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=72.99 E-value=7.5 Score=36.36 Aligned_cols=42 Identities=14% Similarity=0.219 Sum_probs=35.1
Q ss_pred CCCeeecCCeeEEEEecCCeEEEEe-CCCc--EEEcCEEEEecCh
Q 021822 66 TDPRLKLKKTVRKINQSKNKVIITT-EDGS--VYHANYVIVTVSV 107 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~~~~v~V~~-~~G~--~~~ad~VI~a~P~ 107 (307)
.+.+++++++|++|+..++.+.+.. .+|+ .+.+|++|+|+..
T Consensus 106 ~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 106 FNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp TTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred cCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCC
Confidence 3778999999999999888888775 3565 6799999999875
No 213
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=72.26 E-value=5.6 Score=38.01 Aligned_cols=40 Identities=13% Similarity=0.244 Sum_probs=32.0
Q ss_pred CCCeeecCCeeEEEEecCCeEEEEeCCC--cEEEcCEEEEecChh
Q 021822 66 TDPRLKLKKTVRKINQSKNKVIITTEDG--SVYHANYVIVTVSVG 108 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~~~~v~V~~~~G--~~~~ad~VI~a~P~~ 108 (307)
.|.+|+++++|++|+ ++++.++ .+| +++.+|.||+++...
T Consensus 586 ~GV~v~~~~~v~~i~--~~~v~~~-~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 586 RGVKMIPGVSYQKID--DDGLHVV-INGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp TTCEEECSCEEEEEE--TTEEEEE-ETTEEEEECCSEEEECCCEE
T ss_pred cCCEEEeCcEEEEEe--CCeEEEe-cCCeEEEEeCCEEEECCCcc
Confidence 389999999999998 3456664 567 468999999999764
No 214
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=71.97 E-value=2.5 Score=39.31 Aligned_cols=56 Identities=16% Similarity=0.169 Sum_probs=37.7
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEe-cCC------eE-EEEe---CCCc--EEEcCEEEEecChh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQ-SKN------KV-IITT---EDGS--VYHANYVIVTVSVG 108 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~-~~~------~v-~V~~---~~G~--~~~ad~VI~a~P~~ 108 (307)
.|.+.|.+.+.+. .|.+|+.+++|++|.. +++ ++ .|.. .+|+ ++.||.||+|+...
T Consensus 139 ~l~~~L~~~~~~~-----~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 207 (540)
T 1chu_A 139 EVETTLVSKALNH-----PNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGA 207 (540)
T ss_dssp ---CCCHHHHHHC-----TTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHcC-----CCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCc
Confidence 5666666666541 2789999999999997 434 43 2433 2565 68999999999764
No 215
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=71.12 E-value=9 Score=35.28 Aligned_cols=55 Identities=9% Similarity=0.140 Sum_probs=38.1
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecC----CeEEEE--eCCC-c--EEEcCEEEEecCh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSK----NKVIIT--TEDG-S--VYHANYVIVTVSV 107 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~----~~v~V~--~~~G-~--~~~ad~VI~a~P~ 107 (307)
..+.+.+.+.+.+ .|.+|+++++|++|+..+ +++.|. ..+| + .+.+|.||+++..
T Consensus 250 ~~~~~~~~~~l~~------~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~ 313 (519)
T 3qfa_A 250 QDMANKIGEHMEE------HGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGR 313 (519)
T ss_dssp HHHHHHHHHHHHH------TTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHH------CCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCC
Confidence 3556666666655 489999999998887643 344443 4455 3 4689999999865
No 216
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=69.51 E-value=5.9 Score=33.86 Aligned_cols=42 Identities=19% Similarity=0.142 Sum_probs=33.7
Q ss_pred hCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHhhh
Q 021822 259 QQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLKHF 301 (307)
Q Consensus 259 ~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~~~ 301 (307)
++..++||.+||-.... +.....|+..|..||..|.+.+...
T Consensus 277 ~t~~~~iya~GD~~~~~-~~~~~~A~~~g~~aA~~i~~~l~~~ 318 (335)
T 2a87_A 277 STSLPGVFAAGDLVDRT-YRQAVTAAGSGCAAAIDAERWLAEH 318 (335)
T ss_dssp BCSSTTEEECGGGTCCS-CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEeeecCCcc-HHHHHHHHHhHHHHHHHHHHHhhcC
Confidence 34457999999987753 3457789999999999999988763
No 217
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=69.09 E-value=3.8 Score=36.77 Aligned_cols=40 Identities=18% Similarity=0.345 Sum_probs=31.9
Q ss_pred CCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChh
Q 021822 66 TDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
.|.+++. .+|++|+.+++ .|++.+|+++.||+||+|+-..
T Consensus 72 ~gv~~~~-~~v~~id~~~~--~V~~~~g~~i~~d~lviAtG~~ 111 (437)
T 3sx6_A 72 KGIHFIA-QSAEQIDAEAQ--NITLADGNTVHYDYLMIATGPK 111 (437)
T ss_dssp TTCEEEC-SCEEEEETTTT--EEEETTSCEEECSEEEECCCCE
T ss_pred CCCEEEE-eEEEEEEcCCC--EEEECCCCEEECCEEEECCCCC
Confidence 3788874 69999998766 5666788889999999998763
No 218
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=69.02 E-value=6.4 Score=33.04 Aligned_cols=54 Identities=15% Similarity=0.194 Sum_probs=39.5
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecCh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
..+.+++.+.+.. .+.++.. ..|..+....+...+.+.++.++.+|+||+|+-.
T Consensus 66 ~~l~~~~~~~~~~------~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~ 119 (314)
T 4a5l_A 66 NELMMNMRTQSEK------YGTTIIT-ETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGA 119 (314)
T ss_dssp HHHHHHHHHHHHH------TTCEEEC-CCEEEEECSSSSEEEEETTCCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHhh------cCcEEEE-eEEEEeecCCCceEEEECCCeEEEEeEEEEcccc
Confidence 4677777777665 3555554 4567777666667777778889999999999986
No 219
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=68.63 E-value=7.3 Score=35.28 Aligned_cols=42 Identities=12% Similarity=0.258 Sum_probs=33.7
Q ss_pred CCCeeecCCeeEEEEecCCeEEEEe-CCCc--EEEcCEEEEecCh
Q 021822 66 TDPRLKLKKTVRKINQSKNKVIITT-EDGS--VYHANYVIVTVSV 107 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~~~~v~V~~-~~G~--~~~ad~VI~a~P~ 107 (307)
.+.+++++++|++|+..++.+.+.. .+|+ .+.+|++|+|+..
T Consensus 79 ~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 79 KDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGS 123 (472)
T ss_dssp --CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred cCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCC
Confidence 3778999999999999888888775 3454 6899999999865
No 220
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=68.24 E-value=7.7 Score=34.82 Aligned_cols=41 Identities=12% Similarity=0.222 Sum_probs=33.9
Q ss_pred CCeeecCCeeEEEEecCCeEEEEe-CCCc--EEEcCEEEEecCh
Q 021822 67 DPRLKLKKTVRKINQSKNKVIITT-EDGS--VYHANYVIVTVSV 107 (307)
Q Consensus 67 g~~i~l~~~V~~I~~~~~~v~V~~-~~G~--~~~ad~VI~a~P~ 107 (307)
|.+++++++|++|+..++.+.+.. .+|+ ++.||++|+|+..
T Consensus 70 gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~ 113 (447)
T 1nhp_A 70 GVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGA 113 (447)
T ss_dssp TCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCC
Confidence 778999999999998888787765 4465 3899999999875
No 221
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=67.96 E-value=9.5 Score=34.29 Aligned_cols=40 Identities=13% Similarity=0.199 Sum_probs=31.2
Q ss_pred CCCeeecCCeeEEEEecCCeEEEEeCCC-cEEEcCEEEEecChh
Q 021822 66 TDPRLKLKKTVRKINQSKNKVIITTEDG-SVYHANYVIVTVSVG 108 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~~~~v~V~~~~G-~~~~ad~VI~a~P~~ 108 (307)
.|.+++.++.+. ++ .+.+.|.+.+| +++.+|++|+|+...
T Consensus 104 ~gv~~~~g~~~~-id--~~~v~V~~~~G~~~i~~d~lViATGs~ 144 (455)
T 1ebd_A 104 NKVEIVKGEAYF-VD--ANTVRVVNGDSAQTYTFKNAIIATGSR 144 (455)
T ss_dssp TTCEEEESEEEE-EE--TTEEEEEETTEEEEEECSEEEECCCEE
T ss_pred CCCEEEEEEEEE-cc--CCeEEEEeCCCcEEEEeCEEEEecCCC
Confidence 478999998664 43 46688888777 679999999999763
No 222
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=67.87 E-value=4.7 Score=36.33 Aligned_cols=42 Identities=17% Similarity=0.259 Sum_probs=34.4
Q ss_pred CCCeeecCCeeEEEEecCCeEEEEe-CCCcEEEcCEEEEecCh
Q 021822 66 TDPRLKLKKTVRKINQSKNKVIITT-EDGSVYHANYVIVTVSV 107 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~~~~v~V~~-~~G~~~~ad~VI~a~P~ 107 (307)
.+.+++++++|++|+..++.+.+.. .+++++.+|++|+|+..
T Consensus 71 ~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~ 113 (452)
T 3oc4_A 71 QKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGA 113 (452)
T ss_dssp TTEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCC
T ss_pred CCCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCc
Confidence 3778999999999999888887752 24457899999999876
No 223
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=67.55 E-value=5.3 Score=34.99 Aligned_cols=38 Identities=5% Similarity=0.262 Sum_probs=31.2
Q ss_pred CCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecCh
Q 021822 67 DPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 67 g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
|.+++++++|+.|+.+.. .|+ .+|+++.||++|+|+..
T Consensus 74 ~v~~~~g~~v~~id~~~~--~V~-~~g~~~~~d~lViATGs 111 (367)
T 1xhc_A 74 GIEIRLAEEAKLIDRGRK--VVI-TEKGEVPYDTLVLATGA 111 (367)
T ss_dssp TEEEECSCCEEEEETTTT--EEE-ESSCEEECSEEEECCCE
T ss_pred CcEEEECCEEEEEECCCC--EEE-ECCcEEECCEEEECCCC
Confidence 678999999999997653 344 56778999999999975
No 224
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=66.72 E-value=9.4 Score=36.30 Aligned_cols=54 Identities=15% Similarity=0.114 Sum_probs=37.9
Q ss_pred HHHHHHHhhhccCCCCCC-CC-eeecCCeeEEEEecCC---eE-EEE---eCCCc--EEEcCEEEEecChh
Q 021822 49 VVHYIANQFLSHNNNKIT-DP-RLKLKKTVRKINQSKN---KV-IIT---TEDGS--VYHANYVIVTVSVG 108 (307)
Q Consensus 49 l~~~L~~~~~~~~~~~~~-g~-~i~l~~~V~~I~~~~~---~v-~V~---~~~G~--~~~ad~VI~a~P~~ 108 (307)
+.+.|.+.+.+ . |. +|+.+++|++|..+++ ++ .|. ..+|+ .+.|+.||+|+-..
T Consensus 153 ~~~~l~~~~~~------~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~ 217 (643)
T 1jnr_A 153 YKPIIAEAAKM------AVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGA 217 (643)
T ss_dssp HHHHHHHHHHH------HHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred HHHHHHHHHHh------cCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcc
Confidence 44555555443 3 77 8999999999998766 54 232 25665 58999999998664
No 225
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=66.12 E-value=15 Score=30.66 Aligned_cols=41 Identities=20% Similarity=0.142 Sum_probs=31.4
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHh
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLK 299 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~ 299 (307)
+++..++||.|||-....+ ..+.-|+..|..||..+.+.|+
T Consensus 272 ~~Ts~pgIyA~GDv~~~~~-~~~~~A~~~G~~AA~~~~~yL~ 312 (314)
T 4a5l_A 272 PKTSVDGVFACGDVCDRVY-RQAIVAAGSGCMAALSCEKWLQ 312 (314)
T ss_dssp TBCSSTTEEECSTTTCSSC-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEEeccCCcc-hHHHHHHHHHHHHHHHHHHHHh
Confidence 4566789999999776422 2456799999999999988775
No 226
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=65.97 E-value=6.5 Score=34.91 Aligned_cols=39 Identities=18% Similarity=0.222 Sum_probs=32.9
Q ss_pred CCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecCh
Q 021822 67 DPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 67 g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
+.+++++++|++|+.... .|.+.+|+.+.+|++|+|+..
T Consensus 79 ~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~ 117 (415)
T 3lxd_A 79 AVEMKLGAEVVSLDPAAH--TVKLGDGSAIEYGKLIWATGG 117 (415)
T ss_dssp TEEEEETCCEEEEETTTT--EEEETTSCEEEEEEEEECCCE
T ss_pred CcEEEeCCEEEEEECCCC--EEEECCCCEEEeeEEEEccCC
Confidence 778999999999987764 455678888999999999864
No 227
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=65.47 E-value=17 Score=33.92 Aligned_cols=55 Identities=13% Similarity=0.196 Sum_probs=37.7
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEec------C---CeEEEE--eCCCcEEE--cCEEEEecCh
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQS------K---NKVIIT--TEDGSVYH--ANYVIVTVSV 107 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~------~---~~v~V~--~~~G~~~~--ad~VI~a~P~ 107 (307)
..+.+.+.+.+.+ .|.+|++++.|++|... + +++.|. ..+|+++. +|.||+++..
T Consensus 326 ~~~~~~~~~~l~~------~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~ 393 (598)
T 2x8g_A 326 QQMAEKVGDYMEN------HGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGR 393 (598)
T ss_dssp HHHHHHHHHHHHH------TTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHHHh------CCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCC
Confidence 3455566666655 48999999998888642 2 445444 45776654 9999999865
No 228
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=64.95 E-value=10 Score=34.18 Aligned_cols=40 Identities=10% Similarity=0.087 Sum_probs=31.1
Q ss_pred CCCeeecCCeeEEEEecCCeEEEEeCCC--cEEEcCEEEEecChh
Q 021822 66 TDPRLKLKKTVRKINQSKNKVIITTEDG--SVYHANYVIVTVSVG 108 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~~~~v~V~~~~G--~~~~ad~VI~a~P~~ 108 (307)
.|.+++.++.+. .+.+.+.|.+.+| +++.+|.||+|+...
T Consensus 104 ~gv~~~~g~~~~---id~~~v~V~~~~G~~~~~~~d~lViAtG~~ 145 (464)
T 2a8x_A 104 NKITEIHGYGTF---ADANTLLVDLNDGGTESVTFDNAIIATGSS 145 (464)
T ss_dssp TTCEEECEEEEE---SSSSEEEEEETTSCCEEEEEEEEEECCCEE
T ss_pred CCCEEEEeEEEE---ecCCeEEEEeCCCceEEEEcCEEEECCCCC
Confidence 478899888654 3456788888888 679999999999763
No 229
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=64.06 E-value=6.3 Score=35.49 Aligned_cols=40 Identities=23% Similarity=0.322 Sum_probs=30.3
Q ss_pred CCCCcEEEecccccCC-CCc--chhHHHHHHHHHHHHHHHHHh
Q 021822 260 QPFGRIYFAGEHTNST-YLG--YVDGAYFSGINTANALIKCLK 299 (307)
Q Consensus 260 ~p~~~l~~aGd~~~~~-~~g--~~egAv~SG~~aA~~il~~l~ 299 (307)
+++++||+||+-+... +.| .+..|+.+|+.|++.+.+..+
T Consensus 402 ~~i~GLy~aGEv~~v~g~~GG~~l~~a~~~G~~Ag~~aa~~~~ 444 (447)
T 2i0z_A 402 KFTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGENAK 444 (447)
T ss_dssp SSSBTEEECGGGBSCBCCTTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcCCCEEEEEeeccCccCCCcHHHHHHHHHHHHHHHHHHHhhh
Confidence 5779999999987742 122 456799999999998876543
No 230
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=63.59 E-value=8.3 Score=34.67 Aligned_cols=42 Identities=7% Similarity=0.188 Sum_probs=34.0
Q ss_pred CCCeeecCCeeEEEEecCCeEEEEeC-C--CcEEEcCEEEEecCh
Q 021822 66 TDPRLKLKKTVRKINQSKNKVIITTE-D--GSVYHANYVIVTVSV 107 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~~~~v~V~~~-~--G~~~~ad~VI~a~P~ 107 (307)
.|.+++++++|+.|+..++.+.+... + ++++.+|.+|+|+..
T Consensus 71 ~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs 115 (452)
T 2cdu_A 71 LGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGS 115 (452)
T ss_dssp TTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred cCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCC
Confidence 37889999999999988777877652 2 356899999999974
No 231
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=62.77 E-value=14 Score=32.56 Aligned_cols=43 Identities=19% Similarity=0.209 Sum_probs=34.0
Q ss_pred HhhC-CCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHh
Q 021822 257 DLQQ-PFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLK 299 (307)
Q Consensus 257 ~~~~-p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~ 299 (307)
.+++ ..++||.+||......+.....|...|..||+.|...++
T Consensus 293 ~~~~~~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l~ 336 (409)
T 3h8l_A 293 NMVSIKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRLG 336 (409)
T ss_dssp TSBBSSCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHTT
T ss_pred ccccCCCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 3444 348999999998743355678899999999999999883
No 232
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=60.47 E-value=10 Score=36.15 Aligned_cols=37 Identities=19% Similarity=0.260 Sum_probs=27.3
Q ss_pred CcEEEecccccCCCC--c-chhHHHHHHHHHHHHHHHHHh
Q 021822 263 GRIYFAGEHTNSTYL--G-YVDGAYFSGINTANALIKCLK 299 (307)
Q Consensus 263 ~~l~~aGd~~~~~~~--g-~~egAv~SG~~aA~~il~~l~ 299 (307)
++++++||+.+...+ | .++-|++.+...|..|...++
T Consensus 351 gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~ 390 (665)
T 1pn0_A 351 ERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLT 390 (665)
T ss_dssp TTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHc
Confidence 689999999876422 2 588888888887777665443
No 233
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=59.63 E-value=11 Score=34.09 Aligned_cols=37 Identities=22% Similarity=0.185 Sum_probs=30.1
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
+++..++||.+||-... +.....|+..|+.||+.|+.
T Consensus 313 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 313 FNSKFPHIKVVGDVTFG--PMLAHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp SBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEeeccCCC--cccHHHHHHHHHHHHHHHcC
Confidence 44556899999998764 45677899999999999985
No 234
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=58.96 E-value=21 Score=31.92 Aligned_cols=42 Identities=14% Similarity=0.136 Sum_probs=33.5
Q ss_pred CCeeecCCeeEEEEecCCeEEEEeCC-C--cEEEcCEEEEecChh
Q 021822 67 DPRLKLKKTVRKINQSKNKVIITTED-G--SVYHANYVIVTVSVG 108 (307)
Q Consensus 67 g~~i~l~~~V~~I~~~~~~v~V~~~~-G--~~~~ad~VI~a~P~~ 108 (307)
+.+++++++|++|+.....+.+.... + ..+.||++|+|+...
T Consensus 71 ~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~ 115 (437)
T 4eqs_A 71 QITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGAS 115 (437)
T ss_dssp CCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEE
T ss_pred CCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCc
Confidence 67899999999999888777765543 2 357999999999763
No 235
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=58.67 E-value=13 Score=33.42 Aligned_cols=37 Identities=14% Similarity=0.133 Sum_probs=29.4
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
+++..++||.+||-... +.....|+..|+.||..|+.
T Consensus 305 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 341 (470)
T 1dxl_A 305 FSTNVSGVYAIGDVIPG--PMLAHKAEEDGVACVEYLAG 341 (470)
T ss_dssp CBCSSTTEEECSTTSSS--CCCHHHHHHHHHHHHHHHTT
T ss_pred CccCCCCEEEEeccCCC--CccHHHHHHHHHHHHHHHcC
Confidence 44556799999998764 45577899999999999874
No 236
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=57.88 E-value=16 Score=33.71 Aligned_cols=42 Identities=17% Similarity=0.229 Sum_probs=32.2
Q ss_pred CCeeecCCeeEEEEecCCeE-EEEeCC---Cc--EE---EcCEEEEecChh
Q 021822 67 DPRLKLKKTVRKINQSKNKV-IITTED---GS--VY---HANYVIVTVSVG 108 (307)
Q Consensus 67 g~~i~l~~~V~~I~~~~~~v-~V~~~~---G~--~~---~ad~VI~a~P~~ 108 (307)
+.+|++++.|++|..+++++ .|.+.+ |+ ++ .++.||+++...
T Consensus 210 ~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~ 260 (546)
T 1kdg_A 210 NFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAF 260 (546)
T ss_dssp TEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHH
T ss_pred CcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChh
Confidence 67999999999999877654 466544 63 33 789999998764
No 237
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=57.78 E-value=11 Score=33.73 Aligned_cols=40 Identities=18% Similarity=0.341 Sum_probs=32.2
Q ss_pred CCCeeecCCeeEEEEecCCeEEEEeCCC-cEEEcCEEEEecCh
Q 021822 66 TDPRLKLKKTVRKINQSKNKVIITTEDG-SVYHANYVIVTVSV 107 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~~~~v~V~~~~G-~~~~ad~VI~a~P~ 107 (307)
.+.+++++++|++|+.. ...|.+.+| .++.+|++|+|+..
T Consensus 72 ~gi~v~~~~~v~~i~~~--~~~v~~~~g~~~~~~d~lviAtG~ 112 (449)
T 3kd9_A 72 RGIDLHLNAEVIEVDTG--YVRVRENGGEKSYEWDYLVFANGA 112 (449)
T ss_dssp TTCEEETTCEEEEECSS--EEEEECSSSEEEEECSEEEECCCE
T ss_pred cCcEEEecCEEEEEecC--CCEEEECCceEEEEcCEEEECCCC
Confidence 47899999999999754 356777777 37899999999874
No 238
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=57.49 E-value=12 Score=34.55 Aligned_cols=42 Identities=14% Similarity=0.107 Sum_probs=33.5
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHhh
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLKH 300 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~~ 300 (307)
+++..++||.+||-.... ...+..|+..|..||..|.+.|..
T Consensus 476 ~~ts~p~VfA~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~L~~ 517 (521)
T 1hyu_A 476 CETSVKGVFAAGDCTTVP-YKQIIIATGEGAKASLSAFDYLIR 517 (521)
T ss_dssp CBCSSTTEEECSTTBCCS-SCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEeecccCCC-cceeeehHHhHHHHHHHHHHHHHh
Confidence 344557999999988753 245788999999999999988764
No 239
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=57.49 E-value=13 Score=32.82 Aligned_cols=38 Identities=8% Similarity=0.131 Sum_probs=31.7
Q ss_pred CCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecCh
Q 021822 67 DPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 67 g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
+.++++ ++|++|+.... .|.+.+|+++.+|++|+|+..
T Consensus 71 ~i~~~~-~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 71 AIELIS-DRMVSIDREGR--KLLLASGTAIEYGHLVLATGA 108 (404)
T ss_dssp TEEEEC-CCEEEEETTTT--EEEESSSCEEECSEEEECCCE
T ss_pred CCEEEE-EEEEEEECCCC--EEEECCCCEEECCEEEEeeCC
Confidence 678888 99999998765 455678888999999999875
No 240
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=56.49 E-value=11 Score=34.52 Aligned_cols=55 Identities=9% Similarity=0.189 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEe-CCCc--EEEcCEEEEecCh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITT-EDGS--VYHANYVIVTVSV 107 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~-~~G~--~~~ad~VI~a~P~ 107 (307)
...+.+.+.+.+ . .+.++++++.|.+|+.+++.+.+.. .+++ .+.+|++|+++..
T Consensus 160 ~~~~~~~l~~~l-~------~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa 217 (493)
T 1y56_A 160 SRKVVEELVGKL-N------ENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGA 217 (493)
T ss_dssp HHHHHHHHHHTC-C------TTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCE
T ss_pred HHHHHHHHHHHH-h------cCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCC
Confidence 345666766665 2 4788999999999998877665544 3454 5899999999865
No 241
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=55.83 E-value=12 Score=35.64 Aligned_cols=55 Identities=15% Similarity=0.181 Sum_probs=37.9
Q ss_pred HHHHHHHHhhhccCCCCCC--CCeeecCCeeEEEEecCC---eE-EEE---eCCCc--EEEcCEEEEecChh
Q 021822 48 TVVHYIANQFLSHNNNKIT--DPRLKLKKTVRKINQSKN---KV-IIT---TEDGS--VYHANYVIVTVSVG 108 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~--g~~i~l~~~V~~I~~~~~---~v-~V~---~~~G~--~~~ad~VI~a~P~~ 108 (307)
.+.+.|.+.+.+ . |.+|+.++.|+.|..+++ ++ .|. ..+|+ .+.|+.||+|+-..
T Consensus 167 ~i~~~L~~~a~~------~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~ 232 (662)
T 3gyx_A 167 SYKVIVAEAAKN------ALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGA 232 (662)
T ss_dssp SHHHHHHHHHHH------HHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred HHHHHHHHHHHh------cCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCcc
Confidence 445555555543 3 789999999999988766 53 232 24564 47999999999754
No 242
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=54.90 E-value=8.9 Score=35.74 Aligned_cols=42 Identities=29% Similarity=0.361 Sum_probs=34.4
Q ss_pred hhC-CCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHhhh
Q 021822 258 LQQ-PFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLKHF 301 (307)
Q Consensus 258 ~~~-p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~~~ 301 (307)
+.+ ..++||.|||-.- |-|.+-.|-.+|.++|+.|++.+...
T Consensus 503 ~~~~~~~gly~~GegaG--~a~gi~~Aa~~G~~~a~~i~~~~~~~ 545 (549)
T 3nlc_A 503 FQSVNLKGFYPAGEGAG--YAGGILSAGIDGIKVAEAVARDIVAA 545 (549)
T ss_dssp TSCTTCBTEEECHHHHT--SCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceECCcCCEEEccccCC--hhhHHHHHHHHHHHHHHHHHHHhhhc
Confidence 344 3579999999864 56778899999999999999998764
No 243
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=54.67 E-value=14 Score=32.91 Aligned_cols=44 Identities=11% Similarity=0.050 Sum_probs=34.2
Q ss_pred HhhC-CCCcEEEecccccCC----------CCcchhHHHHHHHHHHHHHHHHHhh
Q 021822 257 DLQQ-PFGRIYFAGEHTNST----------YLGYVDGAYFSGINTANALIKCLKH 300 (307)
Q Consensus 257 ~~~~-p~~~l~~aGd~~~~~----------~~g~~egAv~SG~~aA~~il~~l~~ 300 (307)
.+++ ..++||.+||..... .+-....|+..|..||+.|++.+..
T Consensus 280 ~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g 334 (430)
T 3h28_A 280 CFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRN 334 (430)
T ss_dssp TSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcC
Confidence 3455 358999999987642 1345778999999999999999876
No 244
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=53.68 E-value=19 Score=32.72 Aligned_cols=37 Identities=22% Similarity=0.135 Sum_probs=29.4
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
+++..++||.+||-... +.....|+..|+.||+.|+.
T Consensus 305 ~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 341 (499)
T 1xdi_A 305 SRTLATGIYAAGDCTGL--LPLASVAAMQGRIAMYHALG 341 (499)
T ss_dssp SBCSSTTEEECSGGGTS--CSCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEEeccCCC--cccHHHHHHHHHHHHHHhcC
Confidence 44556799999998764 45567899999999999874
No 245
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=53.24 E-value=13 Score=34.10 Aligned_cols=42 Identities=17% Similarity=0.288 Sum_probs=31.7
Q ss_pred CCeeecCCeeEEEEecC-C-e-EEEEe--CCC-----cEEEcCEEEEecChh
Q 021822 67 DPRLKLKKTVRKINQSK-N-K-VIITT--EDG-----SVYHANYVIVTVSVG 108 (307)
Q Consensus 67 g~~i~l~~~V~~I~~~~-~-~-v~V~~--~~G-----~~~~ad~VI~a~P~~ 108 (307)
+.+|+++++|++|..++ + + +.|.+ .+| .++.|+.||++...-
T Consensus 236 n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~ 287 (504)
T 1n4w_A 236 KVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSL 287 (504)
T ss_dssp SEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHH
T ss_pred CcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCC
Confidence 37999999999999875 3 3 34555 356 257899999998765
No 246
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=50.50 E-value=24 Score=30.68 Aligned_cols=39 Identities=8% Similarity=0.166 Sum_probs=30.6
Q ss_pred CCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecCh
Q 021822 66 TDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
.+.+++++++|+.|+..+..+. +.+ .++.+|++|+|+..
T Consensus 73 ~~v~~~~~~~v~~i~~~~~~v~--~~~-~~~~~d~lviAtG~ 111 (384)
T 2v3a_A 73 LNARILTHTRVTGIDPGHQRIW--IGE-EEVRYRDLVLAWGA 111 (384)
T ss_dssp TTCEEECSCCCCEEEGGGTEEE--ETT-EEEECSEEEECCCE
T ss_pred CCcEEEeCCEEEEEECCCCEEE--ECC-cEEECCEEEEeCCC
Confidence 3788999999999997655444 444 47999999999976
No 247
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=50.30 E-value=17 Score=33.29 Aligned_cols=43 Identities=16% Similarity=0.156 Sum_probs=32.0
Q ss_pred CCeeecCCeeEEEEecC-C-e-EEEEeC--CC-----cEEEcCEEEEecChhh
Q 021822 67 DPRLKLKKTVRKINQSK-N-K-VIITTE--DG-----SVYHANYVIVTVSVGV 109 (307)
Q Consensus 67 g~~i~l~~~V~~I~~~~-~-~-v~V~~~--~G-----~~~~ad~VI~a~P~~~ 109 (307)
+.+|+++++|++|..++ + + +.|.+. +| .++.|+.||++...-.
T Consensus 241 n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~ 293 (507)
T 1coy_A 241 KLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVG 293 (507)
T ss_dssp CEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHH
T ss_pred CcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccC
Confidence 47899999999999876 3 3 345553 56 2578999999987653
No 248
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=49.66 E-value=14 Score=34.16 Aligned_cols=39 Identities=13% Similarity=0.308 Sum_probs=29.4
Q ss_pred CCeeec--CCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChhh
Q 021822 67 DPRLKL--KKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 67 g~~i~l--~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~~ 109 (307)
+.++.. +.+|++|..++ |.+.+|+.+.+|.||+|+....
T Consensus 344 nV~lv~~~~~~I~~it~~g----v~~~dG~~~~~DvIV~ATGf~~ 384 (540)
T 3gwf_A 344 NVEAVAIKENPIREVTAKG----VVTEDGVLHELDVLVFATGFDA 384 (540)
T ss_dssp TEEEEETTTSCEEEECSSE----EEETTCCEEECSEEEECCCBSC
T ss_pred CEEEEeCCCCCccEEecCe----EEcCCCCEEECCEEEECCccCc
Confidence 344543 67888887542 6678998899999999998864
No 249
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=49.39 E-value=15 Score=35.41 Aligned_cols=40 Identities=10% Similarity=0.090 Sum_probs=29.8
Q ss_pred CCCeeecCCeeEEEEecCCeEEEEe--CCC-cE------------------EEcCEEEEecCh
Q 021822 66 TDPRLKLKKTVRKINQSKNKVIITT--EDG-SV------------------YHANYVIVTVSV 107 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~~~~v~V~~--~~G-~~------------------~~ad~VI~a~P~ 107 (307)
.|.+|++++.|++|+. +++.+.. .++ +. +.+|.||+++..
T Consensus 584 ~GV~i~~~~~v~~i~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~ 644 (729)
T 1o94_A 584 LHVEELGDHFCSRIEP--GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGR 644 (729)
T ss_dssp TTCEEECSEEEEEEET--TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCE
T ss_pred CCCEEEcCcEEEEEEC--CeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCC
Confidence 4899999999999984 3455443 232 22 899999999876
No 250
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=49.38 E-value=20 Score=33.26 Aligned_cols=38 Identities=16% Similarity=0.316 Sum_probs=28.6
Q ss_pred CCeeec--CCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChhh
Q 021822 67 DPRLKL--KKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 67 g~~i~l--~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~~ 109 (307)
+.++.. +.+|++|..++ |.+.+| .+.+|.||+|+....
T Consensus 352 nV~lv~~~~~~I~~it~~g----v~~~dG-~~~~D~IV~ATGf~~ 391 (545)
T 3uox_A 352 NVHLVDIREAPIQEVTPEG----IKTADA-AYDLDVIIYATGFDA 391 (545)
T ss_dssp TEEEEETTTSCEEEEETTE----EEESSC-EEECSEEEECCCCBS
T ss_pred CEEEEecCCCCceEEccCe----EEeCCC-eeecCEEEECCcccc
Confidence 344544 68888887542 566899 999999999999874
No 251
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=48.64 E-value=31 Score=29.97 Aligned_cols=40 Identities=18% Similarity=0.210 Sum_probs=28.2
Q ss_pred ceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecC
Q 021822 37 SYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSK 83 (307)
Q Consensus 37 ~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~ 83 (307)
.++.+. -...+.+.|.+.+.+. .|.+|+.+++|+.|..++
T Consensus 152 ~~~~~~--~~~d~~~~L~~~a~~~-----~gV~i~~~~~V~dLi~~~ 191 (344)
T 3jsk_A 152 DYVVVK--HAALFTSTVLSKVLQR-----PNVKLFNATTVEDLITRK 191 (344)
T ss_dssp SEEEES--CHHHHHHHHHHHHHTC-----TTEEEEETEEEEEEEEEE
T ss_pred CeEEEe--cHHHHHHHHHHHHHhC-----CCCEEEeCCEEEEEEecC
Confidence 455542 2356778888777641 278999999999998765
No 252
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=47.89 E-value=16 Score=32.38 Aligned_cols=36 Identities=28% Similarity=0.409 Sum_probs=27.7
Q ss_pred CCCCcEEEecccccCC-CC-c-chhHHHHHHHHHHHHHH
Q 021822 260 QPFGRIYFAGEHTNST-YL-G-YVDGAYFSGINTANALI 295 (307)
Q Consensus 260 ~p~~~l~~aGd~~~~~-~~-g-~~egAv~SG~~aA~~il 295 (307)
+..++|||||+-+... +. | .+..|+.||..|++.+.
T Consensus 361 ~~~~gly~~GE~ldv~g~~GGynlq~a~~sg~~ag~~~~ 399 (401)
T 2gqf_A 361 NQVSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSIS 399 (401)
T ss_dssp SSSTTEEECGGGBSCEECTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEEeEEeccCCCCHHHHHHHHHHHHHHHHHh
Confidence 4568999999987752 22 3 56789999999998763
No 253
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=47.80 E-value=33 Score=30.85 Aligned_cols=38 Identities=16% Similarity=0.299 Sum_probs=30.4
Q ss_pred HhhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 257 DLQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 257 ~~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
.+++..++||.+||-... +.....|+..|+.||..|+.
T Consensus 295 ~~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 332 (466)
T 3l8k_A 295 TMKTNIPNVFATGDANGL--APYYHAAVRMSIAAANNIMA 332 (466)
T ss_dssp TCBCSSTTEEECGGGTCS--CCSHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCCEEEEEecCCC--CccHhHHHHHHHHHHHHHhC
Confidence 344556899999998764 45678899999999999984
No 254
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=47.13 E-value=19 Score=32.63 Aligned_cols=37 Identities=16% Similarity=0.149 Sum_probs=29.5
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
+++..++||.+||-... +.....|+..|+.||..|+.
T Consensus 312 ~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 312 MRTNVPHIYAIGDIVGQ--PMLAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp SBCSSTTEEECGGGTCS--SCCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEEEcccCC--CccHHHHHHHHHHHHHHHcC
Confidence 44555799999998764 45677899999999999874
No 255
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=46.92 E-value=24 Score=32.62 Aligned_cols=43 Identities=14% Similarity=0.106 Sum_probs=32.0
Q ss_pred CCCeeecCCeeEEEEecC-CeE-EEEeCC---Cc--EEEcC-EEEEecChh
Q 021822 66 TDPRLKLKKTVRKINQSK-NKV-IITTED---GS--VYHAN-YVIVTVSVG 108 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~~-~~v-~V~~~~---G~--~~~ad-~VI~a~P~~ 108 (307)
.+.+|++++.|++|..++ +++ .|.+.+ |+ ++.|+ .||++...-
T Consensus 222 ~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~ 272 (546)
T 2jbv_A 222 ENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAI 272 (546)
T ss_dssp TTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHH
T ss_pred CCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCcc
Confidence 378999999999999876 543 455432 54 57898 899988663
No 256
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=45.28 E-value=26 Score=31.48 Aligned_cols=38 Identities=16% Similarity=0.169 Sum_probs=29.7
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
+++..++||.+||-... .+.....|+..|+.||..|+.
T Consensus 302 ~~t~~~~IyA~GD~~~~-~~~~~~~A~~~g~~aa~~i~~ 339 (468)
T 2qae_A 302 FETSIPDVYAIGDVVDK-GPMLAHKAEDEGVACAEILAG 339 (468)
T ss_dssp SBCSSTTEEECGGGBSS-SCSCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEeeccCCC-CCccHhHHHHHHHHHHHHHcC
Confidence 44455799999998762 245677899999999999874
No 257
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=44.76 E-value=19 Score=32.54 Aligned_cols=38 Identities=18% Similarity=0.103 Sum_probs=30.0
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
+++..++||.+||-... .+...+.|+..|+.||+.|+.
T Consensus 314 ~~t~~~~IyA~GD~~~~-~~~~~~~A~~~g~~aa~~i~g 351 (483)
T 3dgh_A 314 EATNVANIYAVGDIIYG-KPELTPVAVLAGRLLARRLYG 351 (483)
T ss_dssp CBCSSTTEEECSTTBTT-SCCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEEcccCC-CCccHHHHHHHHHHHHHHHcC
Confidence 44556899999998743 245678899999999999874
No 258
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=43.42 E-value=21 Score=32.38 Aligned_cols=39 Identities=18% Similarity=0.128 Sum_probs=30.2
Q ss_pred HhhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 257 DLQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 257 ~~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
.+++..++||.+||-... .+.....|+..|+.||+.|+.
T Consensus 313 ~~~t~~~~IyA~GD~~~~-~~~~~~~A~~~g~~aa~~i~g 351 (488)
T 3dgz_A 313 QEATSVPHIYAIGDVAEG-RPELTPTAIKAGKLLAQRLFG 351 (488)
T ss_dssp TSBCSSTTEEECGGGBTT-CCCCHHHHHHHHHHHHHHHHS
T ss_pred CCccCCCCEEEeEEecCC-CCcchhHHHHHHHHHHHHHcC
Confidence 344556899999998643 245678899999999999874
No 259
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=42.81 E-value=43 Score=30.03 Aligned_cols=37 Identities=19% Similarity=0.170 Sum_probs=29.7
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
+++..++||.+||-... +.....|+..|+.||..|+.
T Consensus 308 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 344 (474)
T 1zmd_A 308 FQTKIPNIYAIGDVVAG--PMLAHKAEDEGIICVEGMAG 344 (474)
T ss_dssp CBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHTT
T ss_pred CccCCCCEEEeeecCCC--CccHHHHHHHHHHHHHHhcC
Confidence 44556799999998764 45677899999999999875
No 260
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=42.80 E-value=22 Score=32.33 Aligned_cols=38 Identities=24% Similarity=0.281 Sum_probs=30.8
Q ss_pred HhhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 257 DLQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 257 ~~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
.+++..++||.+||-... +.....|+..|+.||..|+.
T Consensus 300 ~~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 300 TLQTSVDHIFVAGDANNT--LTLLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp TCBCSSTTEEECGGGGTS--SCSHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEEecCCC--CccHHHHHHHHHHHHHHHcC
Confidence 445556899999998765 45677899999999999986
No 261
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=42.74 E-value=21 Score=32.05 Aligned_cols=37 Identities=16% Similarity=0.120 Sum_probs=29.9
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
+++..++||.+||-... +.....|+..|+.||+.|+.
T Consensus 294 ~~t~~~~iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 330 (463)
T 4dna_A 294 SRTSTPGIYALGDVTDR--VQLTPVAIHEAMCFIETEYK 330 (463)
T ss_dssp CBCSSTTEEECSGGGSS--CCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCCEEEEEecCCC--CCChHHHHHHHHHHHHHHcC
Confidence 44556899999997764 45678899999999999874
No 262
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=41.80 E-value=22 Score=32.05 Aligned_cols=38 Identities=18% Similarity=0.146 Sum_probs=30.1
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHH
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKC 297 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~ 297 (307)
+++..++||.+||-... +.....|+..|+.||+.|+..
T Consensus 319 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 319 QNTNVKGIYAVGDVCGK--ALLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp CBCSSTTEEECGGGGCS--SCCHHHHHHHHHHHHHHHHSC
T ss_pred cccCCCCEEEEEecCCC--CccHhHHHHHHHHHHHHHcCC
Confidence 44556899999998743 467888999999999998753
No 263
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=41.76 E-value=35 Score=29.72 Aligned_cols=40 Identities=20% Similarity=0.063 Sum_probs=32.1
Q ss_pred CCCcEEEecccccC-CCCcchhHHHHHHHHHHHHHHHHHhh
Q 021822 261 PFGRIYFAGEHTNS-TYLGYVDGAYFSGINTANALIKCLKH 300 (307)
Q Consensus 261 p~~~l~~aGd~~~~-~~~g~~egAv~SG~~aA~~il~~l~~ 300 (307)
..++||-+||-... ..+-+...|...|..+|+.|+..+..
T Consensus 285 ~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~~~l~G 325 (401)
T 3vrd_B 285 LQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVVALLKG 325 (401)
T ss_dssp SSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhcC
Confidence 34799999997653 23456788999999999999998875
No 264
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=41.53 E-value=24 Score=30.36 Aligned_cols=37 Identities=24% Similarity=0.497 Sum_probs=28.6
Q ss_pred CcEEEecccccC---C-CCc-chhHHHHHHHHHHHHHHHHHh
Q 021822 263 GRIYFAGEHTNS---T-YLG-YVDGAYFSGINTANALIKCLK 299 (307)
Q Consensus 263 ~~l~~aGd~~~~---~-~~g-~~egAv~SG~~aA~~il~~l~ 299 (307)
++||++|..... . -.| .+-+-+.||++||+.|++++.
T Consensus 284 ~~~~~~g~~~~~~~~~~r~g~~fg~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 284 DNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp TTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEECChHHHHhcCCCCCChhhhhhhhhhHHHHHHHHHHhh
Confidence 899999988631 1 123 466778999999999999885
No 265
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=41.31 E-value=24 Score=32.37 Aligned_cols=39 Identities=21% Similarity=0.128 Sum_probs=30.5
Q ss_pred HhhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 257 DLQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 257 ~~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
.+++..++||.+||-... .+.....|+..|+.||+.|+.
T Consensus 341 ~~~Ts~~~IyA~GD~~~g-~~~~~~~A~~~g~~aa~~i~g 379 (519)
T 3qfa_A 341 EEQTNVPYIYAIGDILED-KVELTPVAIQAGRLLAQRLYA 379 (519)
T ss_dssp TSBCSSTTEEECGGGBSS-SCCCHHHHHHHHHHHHHHHHS
T ss_pred CCccCCCCEEEEEeccCC-CCccHHHHHHHHHHHHHHHcC
Confidence 345556899999998743 246778899999999999874
No 266
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=41.02 E-value=28 Score=35.12 Aligned_cols=40 Identities=10% Similarity=0.094 Sum_probs=32.6
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHh
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLK 299 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~ 299 (307)
+++..++||.+||-... +..+..|+..|+.||..|...|.
T Consensus 469 ~~Ts~~~VfA~GD~~~~--~~~~~~A~~~G~~aA~~i~~~L~ 508 (1025)
T 1gte_A 469 MQTSEPWVFAGGDIVGM--ANTTVESVNDGKQASWYIHKYIQ 508 (1025)
T ss_dssp CBCSSTTEEECSGGGCS--CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEeCCCCCC--chHHHHHHHHHHHHHHHHHHHHH
Confidence 34455799999998764 45788899999999999998775
No 267
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=39.97 E-value=65 Score=27.62 Aligned_cols=39 Identities=13% Similarity=0.163 Sum_probs=27.7
Q ss_pred ceeeeCCCCHHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEec
Q 021822 37 SYFVADPRGFETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQS 82 (307)
Q Consensus 37 ~~~~~~~gG~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~ 82 (307)
.+++. . -...+.+.|.+.+.+. .|.+|+.+++|+.|..+
T Consensus 138 ~~~~~-~-~~~~~~~~L~~~a~~~-----~GV~i~~~~~V~~Ll~~ 176 (326)
T 2gjc_A 138 DYVVV-K-HAALFISTVLSKVLQL-----PNVKLFNATCVEDLVTR 176 (326)
T ss_dssp SEEEE-S-CHHHHHHHHHHHHHTS-----TTEEEETTEEEEEEEEC
T ss_pred CeEEE-c-chHHHHHHHHHHHHHh-----cCcEEEecceeeeeeec
Confidence 45554 2 2356777777776641 27899999999999876
No 268
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=39.33 E-value=25 Score=31.62 Aligned_cols=38 Identities=13% Similarity=0.106 Sum_probs=30.3
Q ss_pred HhhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 257 DLQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 257 ~~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
.+++..++||.+||-... +.....|+..|+.||+.|+.
T Consensus 305 ~~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 342 (476)
T 3lad_A 305 YCATSVPGVYAIGDVVRG--AMLAHKASEEGVVVAERIAG 342 (476)
T ss_dssp TSBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHHH
T ss_pred CcccCCCCEEEEEccCCC--cccHHHHHHHHHHHHHHhcC
Confidence 345556899999998743 45678899999999999874
No 269
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=39.29 E-value=26 Score=31.34 Aligned_cols=37 Identities=19% Similarity=0.263 Sum_probs=29.4
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
+++..++||.+||-... +.....|+..|+.+|..|+.
T Consensus 291 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 327 (450)
T 1ges_A 291 QNTNIEGIYAVGDNTGA--VELTPVAVAAGRRLSERLFN 327 (450)
T ss_dssp SBCSSTTEEECSGGGTS--CCCHHHHHHHHHHHHHHHHT
T ss_pred CccCCCCEEEEeccCCC--CccHHHHHHHHHHHHHHHcC
Confidence 34455799999998654 45678899999999999875
No 270
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=39.21 E-value=20 Score=31.51 Aligned_cols=40 Identities=15% Similarity=0.141 Sum_probs=30.9
Q ss_pred HhhCCCCcEEEecccccCC--CCcchhHHHHHHHHHHHHHHH
Q 021822 257 DLQQPFGRIYFAGEHTNST--YLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 257 ~~~~p~~~l~~aGd~~~~~--~~g~~egAv~SG~~aA~~il~ 296 (307)
.+++..++||.+||-.... .++....|+..|+.||..|+.
T Consensus 252 ~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g 293 (385)
T 3klj_A 252 HMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACG 293 (385)
T ss_dssp TCBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTT
T ss_pred CcccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcC
Confidence 3455568999999987632 145678899999999999874
No 271
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=39.09 E-value=25 Score=32.49 Aligned_cols=39 Identities=15% Similarity=0.233 Sum_probs=29.2
Q ss_pred CCCCcEEEecccccCCCCc-------chhHHHHHHHHHHHHHHHHH
Q 021822 260 QPFGRIYFAGEHTNSTYLG-------YVDGAYFSGINTANALIKCL 298 (307)
Q Consensus 260 ~p~~~l~~aGd~~~~~~~g-------~~egAv~SG~~aA~~il~~l 298 (307)
+++++||.||+..+.+.+| .+-.|+..|++|++.+.+.+
T Consensus 365 t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~ 410 (540)
T 1chu_A 365 TDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRM 410 (540)
T ss_dssp CSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred CccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHhc
Confidence 6789999999987432222 35568889999999987654
No 272
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=38.65 E-value=22 Score=32.26 Aligned_cols=37 Identities=16% Similarity=0.211 Sum_probs=29.9
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
+++..++||.+||-... +.....|+..|+.||+.|+.
T Consensus 326 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~g 362 (491)
T 3urh_A 326 FQTSIAGVYAIGDVVRG--PMLAHKAEDEGVAVAEIIAG 362 (491)
T ss_dssp CBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCEEEEEecCCC--ccchhHHHHHHHHHHHHHcC
Confidence 44556899999998754 46788999999999999874
No 273
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=38.48 E-value=19 Score=32.14 Aligned_cols=33 Identities=30% Similarity=0.515 Sum_probs=24.3
Q ss_pred CCCcEEEecccccCC-CC-c-chhHHHHHHHHHHHH
Q 021822 261 PFGRIYFAGEHTNST-YL-G-YVDGAYFSGINTANA 293 (307)
Q Consensus 261 p~~~l~~aGd~~~~~-~~-g-~~egAv~SG~~aA~~ 293 (307)
-.++|||||+-+... +. | .+.-|..||..|++.
T Consensus 381 ~~~gLy~aGE~lD~~~~~GGynlq~a~stG~~ag~~ 416 (417)
T 3v76_A 381 EVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQD 416 (417)
T ss_dssp TSTTEEECGGGBSEEECSSSHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEeEecccCCCCHHHHHHHHHHHHHhCc
Confidence 348999999776542 12 3 678899999988764
No 274
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=38.14 E-value=27 Score=31.56 Aligned_cols=37 Identities=19% Similarity=0.200 Sum_probs=29.6
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
+++..++||.+||-... +.....|+..|+.||..|+.
T Consensus 310 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 346 (479)
T 2hqm_A 310 QNTNVPNIYSLGDVVGK--VELTPVAIAAGRKLSNRLFG 346 (479)
T ss_dssp CBCSSTTEEECGGGTTS--SCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEEecCCC--cccHHHHHHHHHHHHHHhcC
Confidence 34556899999998643 45678899999999999874
No 275
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=38.13 E-value=27 Score=33.03 Aligned_cols=44 Identities=14% Similarity=0.072 Sum_probs=31.6
Q ss_pred CCcEEEecccccCCCCc--chhHHHHHHHHHHHHHHHHHhhhhhcC
Q 021822 262 FGRIYFAGEHTNSTYLG--YVDGAYFSGINTANALIKCLKHFCEGR 305 (307)
Q Consensus 262 ~~~l~~aGd~~~~~~~g--~~egAv~SG~~aA~~il~~l~~~~~~~ 305 (307)
.+|||.++.+..+...+ -.-..+.-|.|+|+.|++++++...|+
T Consensus 575 ~~~l~v~d~s~~p~~~~~np~~t~~a~a~r~a~~i~~~~~~~~~~~ 620 (623)
T 3pl8_A 575 FKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNFTPSPFTS 620 (623)
T ss_dssp CSSEEECSGGGCCSCCCSCCHHHHHHHHHHHHHHHHHHCCCCCC--
T ss_pred CCCeEEecCCccCCCCCcChHHHHHHHHHHHHHHHHHHhhcCCCCc
Confidence 47999999998874322 234567789999999999987755444
No 276
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=38.07 E-value=27 Score=31.53 Aligned_cols=38 Identities=11% Similarity=0.156 Sum_probs=29.8
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHH
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKC 297 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~ 297 (307)
+++..++||.+||-... +.....|+..|+.+|+.|+..
T Consensus 314 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~ 351 (484)
T 3o0h_A 314 MTTNVSHIWAVGDVTGH--IQLTPVAIHDAMCFVKNAFEN 351 (484)
T ss_dssp SBCSSTTEEECGGGGTS--CCCHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCCEEEEEecCCC--CcCHHHHHHHHHHHHHHHcCC
Confidence 44556899999998763 456778999999999999854
No 277
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=37.66 E-value=28 Score=32.43 Aligned_cols=39 Identities=18% Similarity=0.116 Sum_probs=30.1
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHH
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKC 297 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~ 297 (307)
+++..++||.+||-... .+.....|+..|+.||..|+..
T Consensus 421 ~~ts~~~VyA~GD~~~~-~~~~~~~A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 421 EQTTVSNVYAIGDINAG-KPQLTPVAIQAGRYLARRLFAG 459 (598)
T ss_dssp SBCSSTTEEECGGGBTT-SCCCHHHHHHHHHHHHHHHHHC
T ss_pred CcCCCCCEEEEeeecCC-CCccHHHHHHhHHHHHHHHhcC
Confidence 34556799999998544 2456788999999999999753
No 278
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=37.44 E-value=46 Score=30.62 Aligned_cols=43 Identities=21% Similarity=0.202 Sum_probs=31.1
Q ss_pred CCCeeecCCeeEEEEecCC---eE-EEEe--CCCcE--E---EcCEEEEecChh
Q 021822 66 TDPRLKLKKTVRKINQSKN---KV-IITT--EDGSV--Y---HANYVIVTVSVG 108 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~~~---~v-~V~~--~~G~~--~---~ad~VI~a~P~~ 108 (307)
.+.+|++++.|++|..+++ ++ .|.+ .+|+. + .++.||+++-.-
T Consensus 207 ~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~ 260 (536)
T 1ju2_A 207 NNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTI 260 (536)
T ss_dssp TTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHH
T ss_pred CCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCccc
Confidence 4789999999999998763 33 3554 35653 4 568999998664
No 279
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=36.68 E-value=39 Score=33.77 Aligned_cols=42 Identities=12% Similarity=0.214 Sum_probs=30.6
Q ss_pred CCCeeecCCeeEEEEec-CCe---EEEEe--C---CC--cEEEcCEEEEecCh
Q 021822 66 TDPRLKLKKTVRKINQS-KNK---VIITT--E---DG--SVYHANYVIVTVSV 107 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~-~~~---v~V~~--~---~G--~~~~ad~VI~a~P~ 107 (307)
.|.+|++++.|++|+.. +++ +.+.. . +| +++.+|.||+++..
T Consensus 329 ~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~ 381 (965)
T 2gag_A 329 DGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGF 381 (965)
T ss_dssp TTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCE
T ss_pred CCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCc
Confidence 48899999999999874 343 34433 1 25 56899999999864
No 280
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=35.62 E-value=40 Score=30.30 Aligned_cols=42 Identities=12% Similarity=0.268 Sum_probs=29.6
Q ss_pred CCeeecCCeeEEEEecCC--eEEEEe--------------CCC--cEEEcCEEEEecChh
Q 021822 67 DPRLKLKKTVRKINQSKN--KVIITT--------------EDG--SVYHANYVIVTVSVG 108 (307)
Q Consensus 67 g~~i~l~~~V~~I~~~~~--~v~V~~--------------~~G--~~~~ad~VI~a~P~~ 108 (307)
|.+|++++.+.+|..++. ++.+.. .+| +++.||.||.++...
T Consensus 266 gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~ 325 (456)
T 1lqt_A 266 RMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYR 325 (456)
T ss_dssp EEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEE
T ss_pred eEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccc
Confidence 678999999999986532 243331 134 358999999998763
No 281
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=35.33 E-value=32 Score=31.21 Aligned_cols=37 Identities=16% Similarity=0.193 Sum_probs=29.8
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
+++..++||.+||-... +.....|+..|+.||+.|+.
T Consensus 314 ~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 314 SKTNVDNIYAIGDVTDR--VMLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp CBCSSTTEEECGGGGCS--CCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEeccCCC--ccCHHHHHHHHHHHHHHhcC
Confidence 44556799999998753 45688899999999999874
No 282
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=35.17 E-value=30 Score=31.22 Aligned_cols=38 Identities=18% Similarity=0.213 Sum_probs=31.1
Q ss_pred CCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHhh
Q 021822 262 FGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLKH 300 (307)
Q Consensus 262 ~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~~ 300 (307)
.++||.+||-... ..+.+..|+..|..+|..|+..+..
T Consensus 359 ~p~vya~Gd~~~g-~~~~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 359 VPGLYCSGWVKRG-PTGVITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp CTTEEECTHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCcC-CCccHHHHHHHHHHHHHHHHHHHHh
Confidence 4799999997653 2455778999999999999998865
No 283
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=34.89 E-value=33 Score=30.80 Aligned_cols=36 Identities=19% Similarity=0.163 Sum_probs=28.7
Q ss_pred hCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 259 QQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 259 ~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
++..++||.+||-... +.....|+..|+.+|..|+.
T Consensus 291 ~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 326 (463)
T 2r9z_A 291 NTNVPGVYALGDITGR--DQLTPVAIAAGRRLAERLFD 326 (463)
T ss_dssp BCSSTTEEECGGGGTS--CCCHHHHHHHHHHHHHHHHS
T ss_pred ccCCCCEEEEeecCCC--cccHHHHHHHHHHHHHHHcC
Confidence 4445799999998653 45678899999999999874
No 284
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=34.77 E-value=28 Score=31.25 Aligned_cols=37 Identities=24% Similarity=0.276 Sum_probs=29.5
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
+++..++||.+||-... +.....|+..|+.+|..|+.
T Consensus 297 ~~t~~~~iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 333 (467)
T 1zk7_A 297 MRTSNPNIYAAGDCTDQ--PQFVYVAAAAGTRAAINMTG 333 (467)
T ss_dssp CBCSSTTEEECSTTBSS--CCCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEEeccCCC--cccHHHHHHHHHHHHHHHcC
Confidence 44556799999998765 45677899999999998864
No 285
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=34.73 E-value=33 Score=31.18 Aligned_cols=37 Identities=19% Similarity=0.197 Sum_probs=29.6
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
+++..++||.+||-... +.....|+..|+.||..|+.
T Consensus 318 ~~t~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 318 SRTNVPNIYAIGDITDR--LMLTPVAINEGAALVDTVFG 354 (495)
T ss_dssp CBCSSTTEEECGGGGCS--CCCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEeccCCC--ccCHHHHHHHHHHHHHHhcC
Confidence 44556799999998753 45678899999999999874
No 286
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=33.91 E-value=50 Score=29.73 Aligned_cols=41 Identities=12% Similarity=0.165 Sum_probs=29.2
Q ss_pred CCeeecCCeeEEEEecC-C-eE-EEEeC---------------CC--cEEEcCEEEEecCh
Q 021822 67 DPRLKLKKTVRKINQSK-N-KV-IITTE---------------DG--SVYHANYVIVTVSV 107 (307)
Q Consensus 67 g~~i~l~~~V~~I~~~~-~-~v-~V~~~---------------~G--~~~~ad~VI~a~P~ 107 (307)
|.+|++++.+.+|..++ + ++ .|.+. +| +++.||.||.++..
T Consensus 271 gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~ 331 (460)
T 1cjc_A 271 AWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGY 331 (460)
T ss_dssp EEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCE
T ss_pred eEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCC
Confidence 67899999999998653 3 32 23221 34 46899999999865
No 287
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=33.77 E-value=33 Score=30.86 Aligned_cols=39 Identities=21% Similarity=0.158 Sum_probs=31.0
Q ss_pred CCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHhh
Q 021822 261 PFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLKH 300 (307)
Q Consensus 261 p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~~ 300 (307)
..++||.+||-... ..+.+..|+..|..+|..|+..+..
T Consensus 350 ~~pgvya~GD~~~g-p~~~i~~a~~~g~~~a~~i~~~l~~ 388 (456)
T 1lqt_A 350 GSPNEYVVGWIKRG-PTGVIGTNKKDAQDTVDTLIKNLGN 388 (456)
T ss_dssp TCSSEEECTHHHHC-SCSCTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeccCCC-CchhHHHHHHHHHHHHHHHHHHHHh
Confidence 34799999997654 2455667999999999999998765
No 288
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=32.67 E-value=7.3 Score=33.49 Aligned_cols=194 Identities=9% Similarity=0.034 Sum_probs=96.6
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChhhhccCcccccCCCCHHH
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVGVLQSDLIGFVPRLPLWK 125 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~~l~~~~i~~~p~l~~~~ 125 (307)
-..+++.|++.+.+ .|++|+. ++|++|+..+ .+.||.||+|+-...-. +.+.
T Consensus 141 p~~~~~~l~~~~~~------~Gv~i~~-~~V~~i~~~~-----------~~~a~~VV~A~G~~s~~-----l~~~----- 192 (351)
T 3g3e_A 141 GKNYLQWLTERLTE------RGVKFFQ-RKVESFEEVA-----------REGADVIVNCTGVWAGA-----LQRD----- 192 (351)
T ss_dssp HHHHHHHHHHHHHH------TTCEEEE-CCCCCHHHHH-----------HTTCSEEEECCGGGGGG-----TSCC-----
T ss_pred HHHHHHHHHHHHHH------CCCEEEE-EEeCCHHHhh-----------cCCCCEEEECCCcChHh-----hcCC-----
Confidence 45888899988877 5899988 8998886432 15689999999876532 1121
Q ss_pred HHHHhhcCCCcceEEEEEcCCCCcCCCCCcceEEeecCCCCceeeeeeccccCCCCceEEEEecchhhHHHhhCCHHHHH
Q 021822 126 KLAINNFDMAIYTKIFMKFPYKFWPTGPGTEFLLYAHETRGYFTIWQHLENELPGENMIFVTVTDEESRRIEQQSEKKTK 205 (307)
Q Consensus 126 ~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~a~~~~~~~~e~~~ 205 (307)
+...+.-...+.++.+ +. ...++...+........|. . . .++ .++++-.. +. ..+....+++..
T Consensus 193 ------~~l~p~rg~~~~~~~~-~~---~~~~~~~~~~~~~~~~~y~-~-p-~~~-~~~iGg~~-~~-~~~~~~~~~~~~ 256 (351)
T 3g3e_A 193 ------PLLQPGRGQIMKVDAP-WM---KHFILTHDPERGIYNSPYI-I-P-GTQ-TVTLGGIF-QL-GNWSELNNIQDH 256 (351)
T ss_dssp ------TTCEEEEEEEEEEECT-TC---CSEEEECCTTTCTTCSCEE-E-E-CSS-CEEEECCC-EE-TCCCCSCCHHHH
T ss_pred ------CceeecCCcEEEEeCC-Cc---ceEEEeccccCCCCceeEE-E-e-CCC-cEEEeeee-ec-CCCCCCCCHHHH
Confidence 1222222233333332 11 1111111000000000111 0 0 122 44332111 00 011222345667
Q ss_pred HHHHHHHHHHhCCCCCCCCCceEEecccCcCCCCCCcCCCCCCCCChhhhhHhh-CC-CCcEEEecccccCCCCcchhHH
Q 021822 206 AEIMQVLKKMFGNGKQIPEPDTMLIPKWWSNRLYKGSYSNWPNGYTLHSYHDLQ-QP-FGRIYFAGEHTNSTYLGYVDGA 283 (307)
Q Consensus 206 ~~~~~~L~~~~p~g~~~~~~~~~~~~~W~~~~~~~g~y~~~~~g~~~~~~~~~~-~p-~~~l~~aGd~~~~~~~g~~egA 283 (307)
+.+++.+.+++| .+. + . -+...|. |.++ .+|. ..-..+.+- .| .++||++.-+.. +| +--|
T Consensus 257 ~~l~~~~~~~~P-~l~--~-~-~i~~~w~------G~r~-~t~D-~p~~~~~ig~~~~~~~~~~~~G~~g---~G-~~~a 319 (351)
T 3g3e_A 257 NTIWEGCCRLEP-TLK--N-A-RIIGERT------GFRP-VRPQ-IRLEREQLRTGPSNTEVIHNYGHGG---YG-LTIH 319 (351)
T ss_dssp HHHHHHHHHHCG-GGG--G-C-EEEEEEE------EEEE-ECSS-CEEEEEEECCSSSCEEEEEEECCTT---CH-HHHH
T ss_pred HHHHHHHHHhCC-Ccc--C-C-cEeeeeE------eeCC-CCCC-ccceeeeccCCCCCCeEEEEeCCCc---ch-Hhhh
Confidence 888899999998 542 1 1 2345564 1121 1222 100001111 12 357888766543 35 6678
Q ss_pred HHHHHHHHHHHHHHHhh
Q 021822 284 YFSGINTANALIKCLKH 300 (307)
Q Consensus 284 v~SG~~aA~~il~~l~~ 300 (307)
-..|+..|+.|...++.
T Consensus 320 p~~g~~la~li~~~~~~ 336 (351)
T 3g3e_A 320 WGCALEAAKLFGRILEE 336 (351)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 88999999999988775
No 289
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=32.40 E-value=39 Score=31.27 Aligned_cols=32 Identities=9% Similarity=0.318 Sum_probs=25.1
Q ss_pred CCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChhh
Q 021822 73 KKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 73 ~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~~ 109 (307)
..+|++|..+ + |.+.+| .+.+|.||+|+....
T Consensus 365 ~~~I~~it~~--g--v~~~dG-~~~~D~iI~ATGf~~ 396 (549)
T 4ap3_A 365 STPIVGMDET--G--IVTTGA-HYDLDMIVLATGFDA 396 (549)
T ss_dssp TSCEEEEETT--E--EEESSC-EEECSEEEECCCEEE
T ss_pred CCCceEEeCC--c--EEeCCC-ceecCEEEECCcccc
Confidence 4777777753 2 566889 999999999998864
No 290
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=31.60 E-value=34 Score=30.76 Aligned_cols=37 Identities=14% Similarity=0.173 Sum_probs=29.2
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
+++..++||.+||-... +.....|+..|+.||..|+.
T Consensus 297 ~~t~~~~Iya~GD~~~~--~~l~~~A~~~g~~aa~~i~g 333 (464)
T 2eq6_A 297 METSVPGVYAIGDAARP--PLLAHKAMREGLIAAENAAG 333 (464)
T ss_dssp CBCSSTTEEECGGGTCS--SCCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEEeccCCC--cccHHHHHHHHHHHHHHhcC
Confidence 34455799999998764 45677899999999999874
No 291
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=31.02 E-value=35 Score=30.36 Aligned_cols=37 Identities=19% Similarity=0.196 Sum_probs=26.3
Q ss_pred eecCCeeEEEEecCCeEEEEeCCCcE-EEcCEEEEecChh
Q 021822 70 LKLKKTVRKINQSKNKVIITTEDGSV-YHANYVIVTVSVG 108 (307)
Q Consensus 70 i~l~~~V~~I~~~~~~v~V~~~~G~~-~~ad~VI~a~P~~ 108 (307)
|.++..|++|..+++ .|.+.||+. +.+|.||+++...
T Consensus 254 i~~~~~v~~~~~~~~--~v~~~dG~~~~~~D~vi~atG~~ 291 (447)
T 2gv8_A 254 LQQVPEITKFDPTTR--EIYLKGGKVLSNIDRVIYCTGYL 291 (447)
T ss_dssp EEEECCEEEEETTTT--EEEETTTEEECCCSEEEECCCBC
T ss_pred eEEecCeEEEecCCC--EEEECCCCEeccCCEEEECCCCC
Confidence 555667777764443 456678876 6899999998753
No 292
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=30.76 E-value=36 Score=31.20 Aligned_cols=37 Identities=22% Similarity=0.178 Sum_probs=29.3
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
+++..++||.+||-... +.....|+..|+.||..|+.
T Consensus 341 ~~t~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~g 377 (523)
T 1mo9_A 341 LQTSVPNVYAVGDLIGG--PMEMFKARKSGCYAARNVMG 377 (523)
T ss_dssp SBCSSTTEEECGGGGCS--SCSHHHHHHHHHHHHHHHTT
T ss_pred CccCCCCEEEEeecCCC--cccHHHHHHHHHHHHHHHcC
Confidence 34455799999998764 45677899999999999874
No 293
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=30.76 E-value=43 Score=29.90 Aligned_cols=37 Identities=19% Similarity=0.276 Sum_probs=29.5
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
+++..++||.+||-... +.....|...|+.+|..|+.
T Consensus 290 ~~t~~~~iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 290 LRTRVPHIYAIGDVVRG--PMLAHKASEEGIAAVEHMVR 326 (455)
T ss_dssp SBCSSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEecCCCC--ccCHHHHHHhHHHHHHHHcC
Confidence 34445799999998764 45677899999999999985
No 294
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=30.56 E-value=18 Score=31.05 Aligned_cols=45 Identities=18% Similarity=0.327 Sum_probs=36.4
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChhh
Q 021822 46 FETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVGV 109 (307)
Q Consensus 46 ~~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~~ 109 (307)
-..+.+.|++.+.+ .|++|+. ++|++|+.. . + .||.||+|+-...
T Consensus 141 p~~~~~~l~~~~~~------~G~~i~~-~~v~~l~~~-----~------~-~a~~VV~A~G~~s 185 (363)
T 1c0p_A 141 APKYCQYLARELQK------LGATFER-RTVTSLEQA-----F------D-GADLVVNATGLGA 185 (363)
T ss_dssp HHHHHHHHHHHHHH------TTCEEEE-CCCSBGGGT-----C------S-SCSEEEECCGGGG
T ss_pred HHHHHHHHHHHHHH------CCCEEEE-EEcccHhhc-----C------c-CCCEEEECCCcch
Confidence 46888999988877 5899998 999988754 0 1 7899999998765
No 295
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=30.33 E-value=56 Score=30.88 Aligned_cols=40 Identities=13% Similarity=0.301 Sum_probs=26.7
Q ss_pred hCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHH
Q 021822 259 QQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCL 298 (307)
Q Consensus 259 ~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l 298 (307)
.+++++||-||+......+...-+++..|+.|++.+.+.+
T Consensus 428 ~t~I~GLyAaGe~a~~~~~r~~~~sl~~G~~ag~~aa~~~ 467 (643)
T 1jnr_A 428 MTTVKGLFAIGDCAGANPHKFSSGSFTEGRIAAKAAVRFI 467 (643)
T ss_dssp BCSSBTEEECGGGBCSCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CceeCCEEeeeccccccccccchhHHHHHHHHHHHHHHHH
Confidence 4688999999998765322233356667777776666554
No 296
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=29.78 E-value=38 Score=30.32 Aligned_cols=37 Identities=14% Similarity=0.125 Sum_probs=29.4
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHH
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~ 296 (307)
+++..++||.+||-... +.....|...|+.||..|+.
T Consensus 293 ~~t~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 329 (458)
T 1lvl_A 293 CQTSMHNVWAIGDVAGE--PMLAHRAMAQGEMVAEIIAG 329 (458)
T ss_dssp CBCSSTTEEECGGGGCS--SCCHHHHHHHHHHHHHHHTT
T ss_pred CcCCCCCEEEeeccCCC--cccHHHHHHHHHHHHHHhcC
Confidence 44455799999998764 45677899999999999874
No 297
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=29.04 E-value=23 Score=29.41 Aligned_cols=38 Identities=13% Similarity=0.078 Sum_probs=29.6
Q ss_pred CcEEEecccccCC---C--CcchhHHHHHHHHHHHHHHHHHhh
Q 021822 263 GRIYFAGEHTNST---Y--LGYVDGAYFSGINTANALIKCLKH 300 (307)
Q Consensus 263 ~~l~~aGd~~~~~---~--~g~~egAv~SG~~aA~~il~~l~~ 300 (307)
+++|.+|+..... . .....+|+.||..+|..|.+.|+.
T Consensus 234 p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~~l~~ 276 (284)
T 1rp0_A 234 PGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGL 276 (284)
T ss_dssp TTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHHHhhh
Confidence 6899999875321 0 125779999999999999999876
No 298
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=28.70 E-value=58 Score=30.53 Aligned_cols=40 Identities=10% Similarity=0.103 Sum_probs=29.0
Q ss_pred hCCCCcEEEecccccCCCCc-------chhHHHHHHHHHHHHHHHHH
Q 021822 259 QQPFGRIYFAGEHTNSTYLG-------YVDGAYFSGINTANALIKCL 298 (307)
Q Consensus 259 ~~p~~~l~~aGd~~~~~~~g-------~~egAv~SG~~aA~~il~~l 298 (307)
+.++++||-||+..+.+.+| .+-.|+..|++|++.+.+.+
T Consensus 369 ~~~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~ 415 (602)
T 1kf6_A 369 ETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERA 415 (602)
T ss_dssp BCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHHHhh
Confidence 34789999999976432222 35568888999998887665
No 299
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=26.60 E-value=57 Score=29.75 Aligned_cols=41 Identities=17% Similarity=0.004 Sum_probs=33.2
Q ss_pred HhhCC-CCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHH
Q 021822 257 DLQQP-FGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKC 297 (307)
Q Consensus 257 ~~~~p-~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~ 297 (307)
.++.+ .++||-+||-.....+.+...|.+.|.-+|+.|.+.
T Consensus 358 ~lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 358 FLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp TSBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 45554 479999999877666778889999999999998764
No 300
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=26.48 E-value=1e+02 Score=19.49 Aligned_cols=28 Identities=14% Similarity=0.234 Sum_probs=22.8
Q ss_pred CCeeecCCeeEEEEecCCeEEEEeCCCc
Q 021822 67 DPRLKLKKTVRKINQSKNKVIITTEDGS 94 (307)
Q Consensus 67 g~~i~l~~~V~~I~~~~~~v~V~~~~G~ 94 (307)
|....+..+|++|+..+.-..|.+.+|.
T Consensus 22 Gd~~yYparI~Si~s~~~~Y~V~fKdgT 49 (66)
T 2l8d_A 22 GSVLYYEVQVTSYDDASHLYTVKYKDGT 49 (66)
T ss_dssp TSSCEEEEEEEEEETTTTEEEEEETTSC
T ss_pred CCccceEEEEEEeccCCceEEEEecCCC
Confidence 6678889999999965556789999884
No 301
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=26.29 E-value=1.5e+02 Score=24.44 Aligned_cols=52 Identities=8% Similarity=0.027 Sum_probs=33.9
Q ss_pred HHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecCh
Q 021822 48 TVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSV 107 (307)
Q Consensus 48 ~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~ 107 (307)
.+.........+ .+..+..+..+..+...... +...+++++.||++|+|+..
T Consensus 63 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~liiAtGs 114 (312)
T 4gcm_A 63 DLSTKMFEHAKK------FGAVYQYGDIKSVEDKGEYK--VINFGNKELTAKAVIIATGA 114 (312)
T ss_dssp HHHHHHHHHHHH------TTCEEEECCCCEEEECSSCE--EEECSSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHhh------ccccccceeeeeeeeeecce--eeccCCeEEEeceeEEcccC
Confidence 455555554444 35677777777766654432 33346778999999999975
No 302
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=26.20 E-value=30 Score=32.20 Aligned_cols=38 Identities=26% Similarity=0.336 Sum_probs=28.2
Q ss_pred CCCCcEEEecccccCC----CCc--chhHHHHHHHHHHHHHHHH
Q 021822 260 QPFGRIYFAGEHTNST----YLG--YVDGAYFSGINTANALIKC 297 (307)
Q Consensus 260 ~p~~~l~~aGd~~~~~----~~g--~~egAv~SG~~aA~~il~~ 297 (307)
+|+++||-||+....- +.| .+-.|+.+|++|++.+.+.
T Consensus 525 ~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~~ 568 (572)
T 1d4d_A 525 KPITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAKF 568 (572)
T ss_dssp SEEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHHH
Confidence 6789999999986431 111 4557899999999988654
No 303
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=26.06 E-value=78 Score=28.12 Aligned_cols=37 Identities=22% Similarity=0.264 Sum_probs=29.7
Q ss_pred CcEEEecccccCCC---CcchhHHHHHHHHHHHHHHHHHh
Q 021822 263 GRIYFAGEHTNSTY---LGYVDGAYFSGINTANALIKCLK 299 (307)
Q Consensus 263 ~~l~~aGd~~~~~~---~g~~egAv~SG~~aA~~il~~l~ 299 (307)
+++.++||+.+... ...++.|+++|..+|+.|.+.+.
T Consensus 282 ~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~ 321 (453)
T 3atr_A 282 NGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFE 321 (453)
T ss_dssp TTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHH
Confidence 68999999977532 23699999999999999987654
No 304
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=25.99 E-value=43 Score=31.00 Aligned_cols=39 Identities=23% Similarity=0.324 Sum_probs=28.6
Q ss_pred CCCCcEEEecccccCCC----Cc--chhHHHHHHHHHHHHHHHHH
Q 021822 260 QPFGRIYFAGEHTNSTY----LG--YVDGAYFSGINTANALIKCL 298 (307)
Q Consensus 260 ~p~~~l~~aGd~~~~~~----~g--~~egAv~SG~~aA~~il~~l 298 (307)
+|+++||-||+.....+ .| .+-.|+.+|++|++.+.+..
T Consensus 519 ~~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~~ 563 (566)
T 1qo8_A 519 KPIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAKHA 563 (566)
T ss_dssp CEEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHh
Confidence 57899999999864321 11 35568999999999887654
No 305
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=25.65 E-value=67 Score=30.56 Aligned_cols=43 Identities=5% Similarity=0.115 Sum_probs=30.3
Q ss_pred hhCCCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHhh
Q 021822 258 LQQPFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLKH 300 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~~ 300 (307)
..+..++||-|||-.+.+.+|..-+++..|+.|+..+.+.+..
T Consensus 448 ~~t~v~gl~a~Ge~~~~~~hg~~~~sl~~g~~ag~~a~~~~~~ 490 (662)
T 3gyx_A 448 RMTTVEGLWTCADGVGASGHKFSSGSHAEGRIVGKQMVRWYLD 490 (662)
T ss_dssp TBCSSBTEECCSSSBCSCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccCCeEeCccccccccCccHhHHHHHHHHHHHHHHHHHhh
Confidence 4566789999999876544565556677787777777666543
No 306
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=25.60 E-value=73 Score=28.55 Aligned_cols=35 Identities=11% Similarity=0.139 Sum_probs=25.2
Q ss_pred eecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChh
Q 021822 70 LKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVG 108 (307)
Q Consensus 70 i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~ 108 (307)
|.....|++|+ ++ .|.+.+|+++.+|.||+|+...
T Consensus 241 V~~~~~V~~i~--~~--~V~~~dG~~i~~D~Vi~atG~~ 275 (464)
T 2xve_A 241 WDERPNLVRVD--TE--NAYFADGSSEKVDAIILCTGYI 275 (464)
T ss_dssp EEECSCEEEEC--SS--EEEETTSCEEECSEEEECCCBC
T ss_pred eEEcCCeEEEe--CC--EEEECCCCEEeCCEEEECCCCC
Confidence 44446677774 33 3666799889999999999764
No 307
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=24.44 E-value=83 Score=29.33 Aligned_cols=38 Identities=11% Similarity=0.045 Sum_probs=28.5
Q ss_pred CCCcEEEecccccCCCC-c-chhHHHHHHHHHHHHHHHHH
Q 021822 261 PFGRIYFAGEHTNSTYL-G-YVDGAYFSGINTANALIKCL 298 (307)
Q Consensus 261 p~~~l~~aGd~~~~~~~-g-~~egAv~SG~~aA~~il~~l 298 (307)
..+||+.+..+..+.-+ + ..-.++.-|++||+.|+++.
T Consensus 534 Gv~~LrVvDaSv~P~~~~~n~~a~~~~iaekaAd~I~~~~ 573 (577)
T 3q9t_A 534 GIKKLRVADASVIPIIPDCRIQNSVYAVGEKCADMIKAEH 573 (577)
T ss_dssp TCBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCcEEeecccccCCCCCccHHHHHHHHHHHHHHHHhhh
Confidence 34799999999887432 2 34456788999999998764
No 308
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=24.33 E-value=87 Score=29.25 Aligned_cols=39 Identities=8% Similarity=0.089 Sum_probs=29.5
Q ss_pred CCCcEEEecccccCCCC-c-chhHHHHHHHHHHHHHHHHHh
Q 021822 261 PFGRIYFAGEHTNSTYL-G-YVDGAYFSGINTANALIKCLK 299 (307)
Q Consensus 261 p~~~l~~aGd~~~~~~~-g-~~egAv~SG~~aA~~il~~l~ 299 (307)
..+||+.+..+..+.-. | ..-.++.-|++||+.|+++..
T Consensus 540 Gv~~LrVvDaSv~P~~~~~n~~~t~~aiaeraAd~I~~~~~ 580 (583)
T 3qvp_A 540 GVQGLRVIDGSIPPTQMSSHVMTVFYAMALKISDAILEDYA 580 (583)
T ss_dssp TCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCeEEeecccCCCCCCcCcHHHHHHHHHHHHHHHHHhhh
Confidence 34799999999887432 2 344567889999999998765
No 309
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=24.28 E-value=24 Score=33.73 Aligned_cols=37 Identities=19% Similarity=0.233 Sum_probs=29.8
Q ss_pred CCCcEEEecccccCCCCcchhHHHHHHHHHHHHHHHHHhh
Q 021822 261 PFGRIYFAGEHTNSTYLGYVDGAYFSGINTANALIKCLKH 300 (307)
Q Consensus 261 p~~~l~~aGd~~~~~~~g~~egAv~SG~~aA~~il~~l~~ 300 (307)
..++||.+||...+ +.+..|+..|..||..|+..+..
T Consensus 640 ~~~~VyaiGD~~~~---~~~~~A~~~g~~aa~~i~~~l~g 676 (690)
T 3k30_A 640 EIASVRGIGDAWAP---GTIAAAVWSGRRAAEEFDAVLPS 676 (690)
T ss_dssp SCSEEEECGGGTSC---BCHHHHHHHHHHHHHHTTCCCCC
T ss_pred CCCCEEEEeCCCch---hhHHHHHHHHHHHHHHHHhhccC
Confidence 45799999998875 45667999999999999877543
No 310
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=23.95 E-value=79 Score=30.03 Aligned_cols=40 Identities=18% Similarity=0.205 Sum_probs=28.4
Q ss_pred CCCCcEEEecccccCCCCc-------chhHHHHHHHHHHHHHHHHHh
Q 021822 260 QPFGRIYFAGEHTNSTYLG-------YVDGAYFSGINTANALIKCLK 299 (307)
Q Consensus 260 ~p~~~l~~aGd~~~~~~~g-------~~egAv~SG~~aA~~il~~l~ 299 (307)
.++++||-||+..+.+.+| ++-.|+..|++|+..+.+...
T Consensus 383 v~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~~ 429 (660)
T 2bs2_A 383 AKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCA 429 (660)
T ss_dssp CSSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eecCCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHhh
Confidence 3789999999965432222 355588899999988876653
No 311
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=23.92 E-value=84 Score=28.45 Aligned_cols=42 Identities=17% Similarity=0.251 Sum_probs=30.7
Q ss_pred CCeeecCCeeEEEEecCCeE---EEEeCCCc-EEEcCEEEEecChh
Q 021822 67 DPRLKLKKTVRKINQSKNKV---IITTEDGS-VYHANYVIVTVSVG 108 (307)
Q Consensus 67 g~~i~l~~~V~~I~~~~~~v---~V~~~~G~-~~~ad~VI~a~P~~ 108 (307)
+-.|..++.|++|..+++++ .+...++. .+.++.||++.-.-
T Consensus 225 nl~v~~~~~v~~i~~~~~~a~gv~~~~~~~~~~~~a~~VILsAGai 270 (526)
T 3t37_A 225 NLTILTGSRVRRLKLEGNQVRSLEVVGRQGSAEVFADQIVLCAGAL 270 (526)
T ss_dssp TEEEECSCEEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECSHHH
T ss_pred CeEEEeCCEEEEEEecCCeEEEEEEEecCceEEEeecceEEccccc
Confidence 46899999999999988763 33333333 46899999987553
No 312
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=23.26 E-value=57 Score=26.88 Aligned_cols=49 Identities=12% Similarity=0.059 Sum_probs=22.8
Q ss_pred cccccCcccccccccCCccccccccCCCceeeeCCCCHHHHHHHHHHhhhc
Q 021822 9 DFEEAEPTRISSLKNTFPRQLMEDFGEDSYFVADPRGFETVVHYIANQFLS 59 (307)
Q Consensus 9 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~L~~~~~~ 59 (307)
++|+..-+...+..++.....|..+.+...++| ||.+-|=.++++.+.+
T Consensus 3 ~~~~~~~~~~~~~~n~~~~~mm~~~~~k~~lVT--Gas~GIG~aia~~la~ 51 (280)
T 4da9_A 3 HHHHHSSGVDLGTENLYFQSMMTQKARPVAIVT--GGRRGIGLGIARALAA 51 (280)
T ss_dssp --------------------CCSCCCCCEEEEE--TTTSHHHHHHHHHHHH
T ss_pred ccccCcccccccccchhhhhhhhccCCCEEEEe--cCCCHHHHHHHHHHHH
Confidence 456666677777788876555666677777885 8999999999988865
No 313
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=23.22 E-value=69 Score=27.72 Aligned_cols=38 Identities=16% Similarity=0.289 Sum_probs=29.4
Q ss_pred CcEEEecccccCC----CCc-chhHHHHHHHHHHHHHHHHHhh
Q 021822 263 GRIYFAGEHTNST----YLG-YVDGAYFSGINTANALIKCLKH 300 (307)
Q Consensus 263 ~~l~~aGd~~~~~----~~g-~~egAv~SG~~aA~~il~~l~~ 300 (307)
++||.+|....-- -.| ..-|=+.||++||+.|++.|+.
T Consensus 294 ~gl~~~gm~~~~~~g~~rmgp~fg~m~~sg~~~a~~~~~~~~~ 336 (344)
T 3jsk_A 294 PGLIVGGMELSEIDGANRMGPTFGAMALSGVKAAHEAIRVFDL 336 (344)
T ss_dssp TTEEECGGGHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEechhhHhhcCCCCCCcccceeeecCHHHHHHHHHHHHh
Confidence 7999999886521 123 4556789999999999999876
No 314
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=23.10 E-value=46 Score=31.06 Aligned_cols=39 Identities=13% Similarity=0.090 Sum_probs=28.0
Q ss_pred CCCcEEEecccccCCCCc-------chhHHHHHHHHHHHHHHHHHh
Q 021822 261 PFGRIYFAGEHTNSTYLG-------YVDGAYFSGINTANALIKCLK 299 (307)
Q Consensus 261 p~~~l~~aGd~~~~~~~g-------~~egAv~SG~~aA~~il~~l~ 299 (307)
|+++||-||+..+.+.+| .+-.|+..|++|++.+.+...
T Consensus 379 ~I~GLyAaGe~a~~g~hG~nrl~gnsl~~~~vfG~~Ag~~aa~~~~ 424 (588)
T 2wdq_A 379 VVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIA 424 (588)
T ss_dssp EEEEEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHTHHHHHH
T ss_pred eeCCceeCccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhh
Confidence 789999999965422222 355688899999988876553
No 315
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=22.63 E-value=1.2e+02 Score=19.24 Aligned_cols=28 Identities=11% Similarity=0.200 Sum_probs=22.5
Q ss_pred CCeeecCCeeEEEEecCCeEEEEeCCCc
Q 021822 67 DPRLKLKKTVRKINQSKNKVIITTEDGS 94 (307)
Q Consensus 67 g~~i~l~~~V~~I~~~~~~v~V~~~~G~ 94 (307)
|....+..+|++|+..+.-..|.+.+|.
T Consensus 25 Gd~~yYparItSits~~~~Y~VkfKdgT 52 (68)
T 2dig_A 25 GSSLYYEVEILSHDSTSQLYTVKYKDGT 52 (68)
T ss_dssp TTCCEEEEEEEEEETTTTEEEEECTTSC
T ss_pred CCccceEEEEEEeccCCceEEEEecCCC
Confidence 6678889999999955555789998884
No 316
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=22.46 E-value=1.6e+02 Score=29.60 Aligned_cols=42 Identities=14% Similarity=0.143 Sum_probs=29.7
Q ss_pred CCCeeecCCeeEEEEecCCeEE-EEeC------CC---------cEEEcCEEEEecCh
Q 021822 66 TDPRLKLKKTVRKINQSKNKVI-ITTE------DG---------SVYHANYVIVTVSV 107 (307)
Q Consensus 66 ~g~~i~l~~~V~~I~~~~~~v~-V~~~------~G---------~~~~ad~VI~a~P~ 107 (307)
.|.++++++.+.+|..+++++. |.+. +| .++.+|.||+++..
T Consensus 383 ~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~ 440 (1025)
T 1gte_A 383 EKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGS 440 (1025)
T ss_dssp TTCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCE
T ss_pred cCCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCC
Confidence 3789999999999986555542 3321 22 25899999999854
No 317
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=22.07 E-value=49 Score=30.65 Aligned_cols=39 Identities=26% Similarity=0.205 Sum_probs=28.2
Q ss_pred CCCCcEEEecccccCCC----C-c-chhHHHHHHHHHHHHHHHHH
Q 021822 260 QPFGRIYFAGEHTNSTY----L-G-YVDGAYFSGINTANALIKCL 298 (307)
Q Consensus 260 ~p~~~l~~aGd~~~~~~----~-g-~~egAv~SG~~aA~~il~~l 298 (307)
+|+++||-||+....-+ . | .+-.|+.+|++|++.+.+..
T Consensus 524 ~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~~ 568 (571)
T 1y0p_A 524 QVIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKYS 568 (571)
T ss_dssp CEEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHHHh
Confidence 67899999999865311 1 1 35558999999999886543
No 318
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=21.96 E-value=89 Score=29.06 Aligned_cols=37 Identities=16% Similarity=0.053 Sum_probs=29.8
Q ss_pred CcEEEecccccCCC---CcchhHHHHHHHHHHHHHHHHHh
Q 021822 263 GRIYFAGEHTNSTY---LGYVDGAYFSGINTANALIKCLK 299 (307)
Q Consensus 263 ~~l~~aGd~~~~~~---~g~~egAv~SG~~aA~~il~~l~ 299 (307)
+++.++||+.+... ...++-|+++|..+|+.|.+.+.
T Consensus 347 ~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~ 386 (584)
T 2gmh_A 347 PGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLT 386 (584)
T ss_dssp TTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHH
Confidence 68999999876421 12599999999999999988764
No 319
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=21.39 E-value=70 Score=28.95 Aligned_cols=39 Identities=18% Similarity=0.130 Sum_probs=29.2
Q ss_pred hhCCCCcEEEecccccC--------------------------------CCCcchhHHHHHHHHHHHHHHH
Q 021822 258 LQQPFGRIYFAGEHTNS--------------------------------TYLGYVDGAYFSGINTANALIK 296 (307)
Q Consensus 258 ~~~p~~~l~~aGd~~~~--------------------------------~~~g~~egAv~SG~~aA~~il~ 296 (307)
+++..++||.+||-... +.+.....|+..|+.||+.|+.
T Consensus 300 ~~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g 370 (500)
T 1onf_A 300 QRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFL 370 (500)
T ss_dssp CBCSSSSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHS
T ss_pred cccCCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhC
Confidence 34445799999998721 2345677899999999999874
No 320
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=20.91 E-value=28 Score=30.24 Aligned_cols=48 Identities=10% Similarity=0.186 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeeecCCeeEEEEecCCeEEEEeCCCcEEEcCEEEEecChhhhcc
Q 021822 47 ETVVHYIANQFLSHNNNKITDPRLKLKKTVRKINQSKNKVIITTEDGSVYHANYVIVTVSVGVLQS 112 (307)
Q Consensus 47 ~~l~~~L~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~P~~~l~~ 112 (307)
..|.+.|.+.+.+ .|.+|+++++|++|+.. .++.||.||.|...... +
T Consensus 98 ~~l~~~L~~~~~~------~gv~i~~~~~v~~i~~~-----------~~~~ad~vV~AdG~~S~-R 145 (381)
T 3c4a_A 98 RGLVHALRDKCRS------QGIAIRFESPLLEHGEL-----------PLADYDLVVLANGVNHK-T 145 (381)
T ss_dssp HHHHHHHHHHHHH------TTCEEETTCCCCSGGGC-----------CGGGCSEEEECCGGGGG-T
T ss_pred HHHHHHHHHHHHH------CCCEEEeCCEeccchhc-----------ccccCCEEEECCCCCch-H
No 321
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=20.15 E-value=85 Score=29.25 Aligned_cols=41 Identities=10% Similarity=0.017 Sum_probs=30.8
Q ss_pred CCCcEEEecccccCCCCc--chhHHHHHHHHHHHHHHHHHhhh
Q 021822 261 PFGRIYFAGEHTNSTYLG--YVDGAYFSGINTANALIKCLKHF 301 (307)
Q Consensus 261 p~~~l~~aGd~~~~~~~g--~~egAv~SG~~aA~~il~~l~~~ 301 (307)
..+||+.++.+..+.-.+ ..-..+.-|+|+|+.|+++.+++
T Consensus 544 Gv~nLrVvDaSv~P~~~~~Np~~ti~aiAeraAd~I~~~~~~~ 586 (587)
T 1gpe_A 544 GTQGLRVIDGSIPPTQVSSHVMTIFYGMALKVADAILDDYAKS 586 (587)
T ss_dssp TCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCcEEeeeccCCCCCCcchHHHHHHHHHHHHHHHHhhhhcC
Confidence 347999999998874322 34467788999999999887654
Done!