BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 021826
         (307 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O51264|PEPF_BORBU Oligoendopeptidase F homolog OS=Borrelia burgdorferi (strain ATCC
           35210 / B31 / CIP 102532 / DSM 4680) GN=pepF PE=3 SV=1
          Length = 590

 Score = 33.1 bits (74), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 20/80 (25%), Positives = 31/80 (38%)

Query: 192 AWPFHQPIYGPQTPPLVAPNGDVGVDGMIINLATLLANTVTNPFNNGYFQGPPTAPIEAA 251
            + +H  +Y P T  ++  N        I+    +L N  T    NG  +       E  
Sbjct: 287 EYLYHYDVYVPLTKGIIFKNSFEDACEKILKSLEVLGNEYTKILRNGLLKERWVDKYENT 346

Query: 252 TACTGVFGSGSYPGYPGRVL 271
              +G F +GSY G P  +L
Sbjct: 347 GKRSGAFSAGSYNGKPYILL 366


>sp|Q7Z1M0|VIT1_SOLIN Vitellogenin-1 OS=Solenopsis invicta PE=2 SV=1
          Length = 1641

 Score = 31.2 bits (69), Expect = 8.9,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 45/81 (55%), Gaps = 10/81 (12%)

Query: 24  TTRKLNALVQE--QPLVLKYHNGALLKGNVTVNLIWYGKFTPIQRSIIVDFIHSLNFNRA 81
           T +KL  +++E  + L +K  +    +GN+ VN ++  +F+P+  + I + I++  F R 
Sbjct: 833 TQKKL--IIEETIEKLGIKGEDPVQFEGNIFVNTLYSSQFSPLDNNTIEETINA--FKRI 888

Query: 82  PQPSTSSWWKTTENYKGGSSN 102
                SSW ++++N+   + N
Sbjct: 889 ----ISSWQRSSKNFTSENIN 905


>sp|P03071|LT_POVBK Large T antigen OS=BK polyomavirus PE=3 SV=1
          Length = 695

 Score = 31.2 bits (69), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 25  TRKLNALVQEQPLVLKYHNGALLKGNVTVNLIWYGKFTPIQRSIIVDFIHSLNFN 79
           T + N ++ +  L+   H  A+L+      + W     P   S+I DF+H + FN
Sbjct: 364 TERFNHILDKMDLIFGAHGNAVLE-QYMAGVAWLHCLLPKMDSVIFDFLHCIVFN 417


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.136    0.430 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,278,244
Number of Sequences: 539616
Number of extensions: 5398513
Number of successful extensions: 11507
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 11481
Number of HSP's gapped (non-prelim): 39
length of query: 307
length of database: 191,569,459
effective HSP length: 117
effective length of query: 190
effective length of database: 128,434,387
effective search space: 24402533530
effective search space used: 24402533530
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)