Citrus Sinensis ID: 021831

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------
Protein Sequence
MQILKARKSANDYLVSPLRFVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIGCL
Secondary Structure (PSIPRED)
ccccccccccccccccccEEEcccccccccEEEEccccccccEEEcccccccccccccEEEEEEEEcccHHHHHHHccccccccccccccEEccccEEEEEEEcccccccccccEEEEEccccccccccEEEEcccccccccccccccHHHHHHccHHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHHcccEEEEccccccHHHHHHccccEEEEccccHHHHHHcccccEEEEccccHHHHHHHHHHcccccEEEEEccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccEccccccccccccccccccHccccHHcEEEEEEccccccEEEEEEcccccccccccEEEEEEEEEEccHcHHHHccccccccccccccEccccccEEEEEccccccccccccEEEEEcccccccccEEEEEEEcHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccHHHHHHHHHHHHcccEEEEEccHHHHHHHHHccccEEEEcccHHHHHHHccccEEEEEccccHHHHHHHHHHHccccEEEEEEccccccHHHccccHHHHHHHHHHHHHHHHHHHHcccEcc
Coil and Loop (DISEMBL)
MQILKARKSANDYLVSPLRFVRFLVTTscravvlprfggpevlevrpnvevpdlkpnevLVRTRavsinpldtrmrsgygrsifepllplilgrdisgeVAAVGASVRSLTVGqevfgalhptavrgtyadyavlsedeltpkpvsvthadasaiPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAsgchvsatcgskSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAvldtigapeteRLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIGCL
Flexible Loop (DISEMBL)
mqilkarksandylvspLRFVRFLVTTSCRAvvlprfggpevlevrpnvevpdlkpnevlvrtravsinpldtrmrsgygrsIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIGCL
Low Complexity Region (SEG)
MQILKARKSANDYLVSPLRFVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRllvlggggavgfaavQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIGCL
Disordered region (IsUnstruct)
**********NDYLVSPLRFVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIGC*
Disordered Region (DISOPRED)
**********************FLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIGCL
Disordered Region (DISEMBL)
MQILKARKSANDYLVSPLRFVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIGCL
Disordered Region (DISPRO)
************YLVSPL*FVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIGCL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MQILKARKSANDYLVSPLRFVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIGCL
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	307	2.2.26 [Sep-21-2011]
Q0VC50	396	Reticulon-4-interacting p	yes	no	0.853	0.661	0.379	1e-43
Q924D0	396	Reticulon-4-interacting p	yes	no	0.899	0.696	0.370	1e-42
Q8WWV3	396	Reticulon-4-interacting p	yes	no	0.853	0.661	0.368	1e-41
Q7T3C7	387	Reticulon-4-interacting p	yes	no	0.879	0.697	0.357	5e-40
Q54II4	352	Reticulon-4-interacting p	yes	no	0.892	0.778	0.309	6e-36
Q9ZUC1	386	Quinone oxidoreductase-li	no	no	0.778	0.619	0.317	2e-28
Q8H0M1	329	Quinone-oxidoreductase ho	N/A	no	0.618	0.577	0.345	4e-25
O97764	330	Zeta-crystallin OS=Bos ta	no	no	0.739	0.687	0.330	8e-25
Q08257	329	Quinone oxidoreductase OS	no	no	0.618	0.577	0.353	8e-25
Q5R4S7	329	Quinone oxidoreductase OS	no	no	0.752	0.702	0.314	1e-24

>sp|Q0VC50|RT4I1_BOVIN Reticulon-4-interacting protein 1, mitochondrial OS=Bos taurus GN=RTN4IP1 PE=2 SV=1

 Score =  176 bits (447), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/290 (37%), Positives = 159/290 (54%), Gaps = 28/290 (9%)

Query: 21  VRFLVTTSCRAVVLP-----RFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTR 74
           VR + TTS R+ V+P     ++G  EVL    N+ +P +  PNEV+++  A SINP+D  
Sbjct: 30  VRKISTTSPRSTVMPAWVIDKYGSNEVLRFTQNMMIPMIHYPNEVIIKVHAASINPIDVN 89

Query: 75  MRSGYGRSIF----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHP 122
           MRSGYG +      +PL         PL LGRD+SG V   G  VR    G EV+ A+ P
Sbjct: 90  MRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVPP 149

Query: 123 TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAA----RMSEGQRL 178
              +GT +++ V+S +E++ KP S+TH  A+++P+ ALTAW A+        R   G+R+
Sbjct: 150 WK-QGTLSEFVVVSGNEVSHKPRSLTHTQAASLPYVALTAWSAINKVGGLNDRNCTGKRV 208

Query: 179 LVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGK- 237
           L+LG  G VG  A+Q   A   HV+A C   + + V   GA+  +DY S ++E  +K   
Sbjct: 209 LILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNVEAQLKSSK 268

Query: 238 -FDAVLDTIGAPETERLGLNFLKR--GGHYMTLHGETAALADHYGLALGL 284
            FD +LD +G   TE   L FLK+  G  Y+TL        D  G+A G+
Sbjct: 269 PFDFILDNVGG-STETWALKFLKKWSGATYVTLVTPFLLNMDRLGIADGM 317

Appears to be a potent inhibitor of regeneration following spinal cord injury.
Bos taurus (taxid: 9913)

>sp|Q924D0|RT4I1_MOUSE Reticulon-4-interacting protein 1, mitochondrial OS=Mus musculus GN=Rtn4ip1 PE=1 SV=2

 Score =  173 bits (439), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/305 (37%), Positives = 165/305 (54%), Gaps = 29/305 (9%)

Query: 22  RFLVTTSCRAVVLP-----RFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRM 75
           R + TTS R+ V+P     ++G  EVL    N+ +P +  PNEV+++  A S+NP+D  M
Sbjct: 31  RGISTTSARSTVMPAWVIDKYGKNEVLRFTQNMMLPIIHYPNEVIIKVHAASVNPIDVNM 90

Query: 76  RSGYGRSIF----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPT 123
           RSGYG +      +PL         PL LGRD+SG V   G  V+    G EV+ A+ P 
Sbjct: 91  RSGYGATALNMKRDPLHMKTKGEEFPLTLGRDVSGVVMECGLDVKYFQPGDEVWAAVPPW 150

Query: 124 AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRLL 179
             +GT +++ V+S +E++ KP S+TH  A+++P+ ALTAW A+     +S+    G+R L
Sbjct: 151 K-QGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLSDKNCKGKRAL 209

Query: 180 VLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKG--K 237
           +LG  G VG  A+Q   A G HV+A C   + + V   GA++ +DY+   +E  +K    
Sbjct: 210 ILGASGGVGTFAIQVMKAWGAHVTAVCSKDASELVRKLGADEVIDYTLGSVEEQLKSLKL 269

Query: 238 FDAVLDTIGAPETERLGLNFLKR--GGHYMTLHGETAALADHYGLALG-LPIATTVLLKK 294
           FD +LD +G   TE   LNFLK+  G  Y+TL        D  G+A G L    TV  K 
Sbjct: 270 FDFILDNVGG-STETWALNFLKKWSGATYVTLVTPFLLNMDRLGVADGMLQTGVTVGTKA 328

Query: 295 RMQTW 299
               W
Sbjct: 329 LKHLW 333

Appears to be a potent inhibitor of regeneration following spinal cord injury.

Mus musculus (taxid: 10090)

>sp|Q8WWV3|RT4I1_HUMAN Reticulon-4-interacting protein 1, mitochondrial OS=Homo sapiens GN=RTN4IP1 PE=1 SV=2

 Score =  170 bits (430), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/290 (36%), Positives = 160/290 (55%), Gaps = 28/290 (9%)

Query: 21  VRFLVTTSCRAVVLP-----RFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTR 74
           VR + TTS R+ V+P     ++G  EVL    N+ +P +  PNEV+V+  A S+NP+D  
Sbjct: 30  VRRISTTSPRSTVMPAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVN 89

Query: 75  MRSGYGRSIF----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHP 122
           MRSGYG +      +PL         PL LGRD+SG V   G  V+    G EV+ A+ P
Sbjct: 90  MRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPP 149

Query: 123 TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRL 178
              +GT +++ V+S +E++ KP S+TH  A+++P+ ALTAW A+     +++    G+R+
Sbjct: 150 WK-QGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRV 208

Query: 179 LVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKG-- 236
           L+LG  G VG  A+Q   A   HV+A C   + + V   GA+  +DY S  +E  +K   
Sbjct: 209 LILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLK 268

Query: 237 KFDAVLDTIGAPETERLGLNFLKR--GGHYMTLHGETAALADHYGLALGL 284
            FD +LD +G   TE    +FLK+  G  Y+TL        D  G+A G+
Sbjct: 269 PFDFILDNVGG-STETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGM 317

Appears to be a potent inhibitor of regeneration following spinal cord injury.

Homo sapiens (taxid: 9606)

>sp|Q7T3C7|RT4I1_DANRE Reticulon-4-interacting protein 1 homolog, mitochondrial OS=Danio rerio GN=rtn4ip1 PE=2 SV=2

 Score =  165 bits (417), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 163/299 (54%), Gaps = 29/299 (9%)

Query: 13  YLVSPLR-FVRFLVTTSCRAVVLP-----RFGGPEVLEVRPNVEVPDLK-PNEVLVRTRA 65
           +LV  LR   R    ++ R  V+P     ++G  +VL    N  +P +  PNEV+V+  A
Sbjct: 7   WLVCSLRCHYRSFSFSAARRTVMPAWVIDKYGKNDVLRFTKNAALPIIHYPNEVVVKVHA 66

Query: 66  VSINPLDTRMRSGYGRSIF----EPL--------LPLILGRDISGEVAAVGASVRSLTVG 113
             +NP+D  MR GYG +      +PL         PLILGRD+SGE+   G  V+    G
Sbjct: 67  AGLNPIDISMRGGYGAATMAMKRDPLNISQSGGEFPLILGRDVSGEIMECGLDVKYFKPG 126

Query: 114 QEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMS 173
            +V+ A+ P   +G+ A++ V+S +E++ KP S+ H +A++IP+ A TAW A+     ++
Sbjct: 127 DQVWAAIPPWK-QGSLAEFVVVSGNEVSHKPKSLRHDEAASIPYVAATAWSAIVNTGGLN 185

Query: 174 EG----QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD 229
           +     +R+L+LGG G VG  A+Q   A G HV+ TC   +   V   GA+  VDY++  
Sbjct: 186 KDNSAKKRVLILGGSGGVGTFAIQMVKAWGAHVTVTCSQNAERLVRDLGADDVVDYTAGP 245

Query: 230 IELAIKG--KFDAVLDTIGAPETERLGLNFLK--RGGHYMTLHGETAALADHYGLALGL 284
           +E  +K   KFD +LD+IG  ETE+  L+ LK   G  ++TL        D  GLA G+
Sbjct: 246 VEKQLKNLEKFDLILDSIGG-ETEKWALDLLKPWSGAKFVTLITPFLQNTDRLGLADGM 303

May be a potent inhibitor of regeneration.

Danio rerio (taxid: 7955)

>sp|Q54II4|RT4I1_DICDI Reticulon-4-interacting protein 1 homolog, mitochondrial OS=Dictyostelium discoideum GN=rtn4ip1 PE=3 SV=1

 Score =  151 bits (381), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 156/291 (53%), Gaps = 17/291 (5%)

Query: 30  RAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSI--FEP 86
           + ++L  +G   ++LE + ++ VP    ++VL++  + SINPLD  MR GY  SI   + 
Sbjct: 2   KGILLNGYGESLDLLEYKTDLPVPKPIKSQVLIKIHSTSINPLDNVMRKGYASSIVDLKL 61

Query: 87  LLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVS 146
            LP+ILGR+ SGE+  +G SV    +G +V+ A  P ++ G++ +Y  + E E++ KP +
Sbjct: 62  KLPIILGRECSGEIVEIGDSVWDYEIGDQVWSASPPFSM-GSHCEYITVDESEISLKPKN 120

Query: 147 VTHADASAIPFAALTAWRA----LKCAARMSEGQRLLVLGGGGAVGFAAVQF--SVASGC 200
           +TH  +++IPFA+LTAW A    L    +++   ++LV GG G+VGF  +Q      +  
Sbjct: 121 LTHQQSASIPFASLTAWNAIYNVLPTNKKITTNTKILVNGGNGSVGFFILQLLKKHLNVN 180

Query: 201 HVSATCGSKSIDRVLAAG-AEQAVDYSSKDIELAIKGKFDAVLDTI----GAPETERLGL 255
            VS TC  K  +++       + +DY++  I      KFD + +         E E+  +
Sbjct: 181 QVSTTCNIKHFEKLKKLTLVNETIDYNNLKINDNDNNKFDLIFNCYDGGKNQNENEKKCI 240

Query: 256 NFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLK--KRMQTWYSYGI 304
           + LK GG+ +  +G     +D  G+  GLP+     L   +R++  YS  +
Sbjct: 241 DALKDGGNLIGFNGPLVKFSDKDGVLSGLPMGMMNQLNSSERIKKQYSKNV 291

Dictyostelium discoideum (taxid: 44689)

>sp|Q9ZUC1|QORL_ARATH Quinone oxidoreductase-like protein At1g23740, chloroplastic OS=Arabidopsis thaliana GN=At1g23740 PE=1 SV=2

 Score =  126 bits (317), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 136/252 (53%), Gaps = 13/252 (5%)

Query: 25  VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
           +    +A V   +GG +VL++  N+ VP++K ++VL++  A ++NP+D + R G  ++  
Sbjct: 74  IPKEMKAWVYSDYGGVDVLKLESNIVVPEIKEDQVLIKVVAAALNPVDAKRRQGKFKATD 133

Query: 85  EPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-----GTYADYAVLSEDE 139
            P LP + G D++G V  VG++V+ L  G EV+  +   A+      G+ A+Y  + E  
Sbjct: 134 SP-LPTVPGYDVAGVVVKVGSAVKDLKEGDEVYANVSEKALEGPKQFGSLAEYTAVEEKL 192

Query: 140 LTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFS--VA 197
           L  KP ++  A A+ +P A  TA   L      S G+ +LVL G G VG   +Q +  V 
Sbjct: 193 LALKPKNIDFAQAAGLPLAIETADEGL-VRTEFSAGKSILVLNGAGGVGSLVIQLAKHVY 251

Query: 198 SGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNF 257
               V+AT  ++ ++ V + GA+ A+DY+ ++IE  +  K+D V D IG  +     +  
Sbjct: 252 GASKVAATASTEKLELVRSLGADLAIDYTKENIE-DLPDKYDVVFDAIGMCDK---AVKV 307

Query: 258 LKRGGHYMTLHG 269
           +K GG  + L G
Sbjct: 308 IKEGGKVVALTG 319

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q8H0M1|QORH_SPIOL Quinone-oxidoreductase homolog, chloroplastic OS=Spinacia oleracea GN=QOR PE=1 SV=1

 Score =  115 bits (288), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 68/197 (34%), Positives = 109/197 (55%), Gaps = 7/197 (3%)

Query: 38  GGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDIS 97
           GG + L+    V VPD K +E+L++  A ++NP+D +++ G  R +     P I G D++
Sbjct: 16  GGTDALK-HVEVAVPDPKSDELLLKIEAATLNPIDWKIQKGVLRPLLPRKFPTIPGTDVA 74

Query: 98  GEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPF 157
           GEV   G++V     G +V   L   A  G  A+YAV  E+    +P  V+ A+ +A+P 
Sbjct: 75  GEVVQAGSAVNRFKTGDKVVAVLS-HATGGALAEYAVAKENLTVARPPEVSAAEGAALPV 133

Query: 158 AALTAWRALKCAARMS-----EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSID 212
           AALTA +AL   A +      E + +L+    G VG  AVQ +     HV+ATCG++++D
Sbjct: 134 AALTAHQALTQFANIKLDGSGERKNILITAASGGVGHYAVQLAKLGNTHVTATCGARNLD 193

Query: 213 RVLAAGAEQAVDYSSKD 229
            V   GA++ +DY + +
Sbjct: 194 FVKGLGADEVLDYKTPE 210

Spinacia oleracea (taxid: 3562)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|O97764|QOR_BOVIN Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2

 Score =  114 bits (286), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 122/239 (51%), Gaps = 12/239 (5%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           RA+ +  FGGPEVL+++ +V VP  K ++VL++ +A  +NP+DT +RSG      +PLLP
Sbjct: 9   RAIRVFEFGGPEVLKLQSDVAVPIPKDHQVLIKVQACGVNPVDTYIRSGTHN--IKPLLP 66

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTH 149
              G D++G + AVG SV +   G  VF       + G YA+YA+ ++  +   P  +  
Sbjct: 67  YTPGFDVAGIIEAVGESVSAFKKGDRVFTT---RTISGGYAEYALAADHTVYTLPEKLDF 123

Query: 150 ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK 209
              +AI     TA+RAL  +A +  G+ +LV G  G VG AA Q + A G  V  T  ++
Sbjct: 124 KQGAAIGIPYFTAYRALLHSACVKPGESVLVHGASGGVGIAACQIARAYGLKVLGTASTE 183

Query: 210 SIDR-VLAAGAEQAVDYSSKDIELAIKGK-----FDAVLDTIGAPETERLGLNFLKRGG 262
              + VL  GA +  ++   D    IK        D +++ +         LN L  GG
Sbjct: 184 EGQKIVLENGAHKVFNHKEADYIDKIKKSVGEKGVDVIIEMLANVNLSN-DLNLLSHGG 241

Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding (By similarity). Has minimal or no quinone reductase activity. Binds strongly to single-stranded DNA.

Bos taurus (taxid: 9913)

>sp|Q08257|QOR_HUMAN Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=1 SV=1

 Score =  114 bits (285), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 112/198 (56%), Gaps = 8/198 (4%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           RAV +  FGGPEVL++R ++ VP  K ++VL++  A  +NP++T +RSG Y R   +PLL
Sbjct: 9   RAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR---KPLL 65

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P   G D++G + AVG +  +   G  VF +   + + G YA+YA+ ++  +   P  + 
Sbjct: 66  PYTPGSDVAGVIEAVGDNASAFKKGDRVFTS---STISGGYAEYALAADHTVYKLPEKLD 122

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
               +AI     TA+RAL  +A +  G+ +LV G  G VG AA Q + A G  +  T G+
Sbjct: 123 FKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGT 182

Query: 209 KSIDR-VLAAGAEQAVDY 225
           +   + VL  GA +  ++
Sbjct: 183 EEGQKIVLQNGAHEVFNH 200

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species. Enhances the stability of mRNA coding for BCL2. NADPH binding interferes with mRNA binding.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

>sp|Q5R4S7|QOR_PONAB Quinone oxidoreductase OS=Pongo abelii GN=CRYZ PE=2 SV=1

 Score =  114 bits (284), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 128/245 (52%), Gaps = 14/245 (5%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           RAV +  FGGPEVL+++ ++ VP  K ++ L++  A  +NP++T +RSG Y R   +PLL
Sbjct: 9   RAVRVFEFGGPEVLKLQSDIAVPIPKDHQALIKVHACGVNPVETYIRSGTYSR---KPLL 65

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P   G D++G + AVG +  +   G  VF +   + + G YA+YA+ ++  +   P  + 
Sbjct: 66  PYTPGSDVAGVIEAVGGNASAFKKGDRVFTS---STISGGYAEYALAADHTVYKLPEKLD 122

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
               +AI     TA+RAL  +A +  G+ +LV G  G VG AA Q + A G  V  T G+
Sbjct: 123 FKQGAAIGIPYFTAYRALIHSAHVKAGESVLVHGASGGVGLAACQIARAYGLKVLGTAGT 182

Query: 209 KSIDR-VLAAGAEQA-----VDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGG 262
           +   + VL  GA +      V+Y  K  +   +   D +++ +      +  L+ L  GG
Sbjct: 183 EEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDVIIEMLANVNLNK-DLSLLSHGG 241

Query: 263 HYMTL 267
             + +
Sbjct: 242 QVIVV 246

Does not have alcohol dehydrogenase activity. Binds NADP and acts through a one-electron transfer process. Orthoquinones, such as 1,2-naphthoquinone or 9,10-phenanthrenequinone, are the best substrates (in vitro). May act in the detoxification of xenobiotics. Interacts with (AU)-rich elements (ARE) in the 3'-UTR of target mRNA species and enhances their stability. NADPH binding interferes with mRNA binding.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 6

EC: .

EC: 5

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	307
255554648	365	zinc binding dehydrogenase, putative [Ri	0.986	0.830	0.764	1e-127
225461572	361	PREDICTED: reticulon-4-interacting prote	0.918	0.781	0.791	1e-121
302142942	396	unnamed protein product [Vitis vinifera]	0.918	0.712	0.791	1e-121
224061278	342	predicted protein [Populus trichocarpa]	0.921	0.827	0.788	1e-118
357136468	364	PREDICTED: reticulon-4-interacting prote	0.902	0.760	0.750	1e-116
356544066	364	PREDICTED: reticulon-4-interacting prote	0.905	0.763	0.741	1e-115
15232485	366	GroES-like zinc-binding alcohol dehydrog	0.912	0.765	0.714	1e-113
21592930	366	zinc-binding dehydrogenase, putative [Ar	0.912	0.765	0.714	1e-113
356546840	364	PREDICTED: reticulon-4-interacting prote	0.905	0.763	0.737	1e-112
297830062	363	oxidoreductase [Arabidopsis lyrata subsp	0.912	0.771	0.721	1e-111

>gi|255554648|ref|XP_002518362.1| zinc binding dehydrogenase, putative [Ricinus communis] gi|223542457|gb|EEF43998.1| zinc binding dehydrogenase, putative [Ricinus communis]

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 234/306 (76%), Positives = 273/306 (89%), Gaps = 3/306 (0%)

Query: 1   MQILKAR--KSANDYLVSPLRFVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNE 58
           MQ L+A   K++++Y +  L  VRFLVT SCRAVVLPRFGGPEVLE+R +VEVP +KPNE
Sbjct: 1   MQFLRAHSLKTSSEYQILKLGSVRFLVT-SCRAVVLPRFGGPEVLELRSDVEVPQIKPNE 59

Query: 59  VLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFG 118
           VLVRTRAVS+NPLDTRMRSGYGRSIFEPLLPLILGRDISGEV A+G SV+SL+VGQEVFG
Sbjct: 60  VLVRTRAVSVNPLDTRMRSGYGRSIFEPLLPLILGRDISGEVTAIGTSVQSLSVGQEVFG 119

Query: 119 ALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRL 178
           ALHPTAVRGTY DYA+LSEDELT KP SV+H +ASAIPFAALTAWRALK  AR++EGQR+
Sbjct: 120 ALHPTAVRGTYTDYAILSEDELTAKPASVSHVEASAIPFAALTAWRALKSTARINEGQRV 179

Query: 179 LVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKF 238
           L++GGGGAVGFAA+Q +VA+GCHV+ATCGS SIDRVL AGAE+A+DY ++DIELAIKGKF
Sbjct: 180 LIVGGGGAVGFAAIQLAVAAGCHVTATCGSLSIDRVLKAGAERAIDYIAEDIELAIKGKF 239

Query: 239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQT 298
           DAVLDTIG PETER+G+NFLKRGG YMTL GE A++ D YG+A+GLPIAT +LLKK++Q 
Sbjct: 240 DAVLDTIGVPETERIGINFLKRGGQYMTLQGEAASVTDRYGIAVGLPIATAILLKKQIQY 299

Query: 299 WYSYGI 304
            YS+GI
Sbjct: 300 RYSHGI 305

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225461572|ref|XP_002285254.1| PREDICTED: reticulon-4-interacting protein 1, mitochondrial [Vitis vinifera]

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 224/283 (79%), Positives = 256/283 (90%), Gaps = 1/283 (0%)

Query: 22  RFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGR 81
           RF+VTT CRAVVLPRFGGP VLE+RP+  VPDLKP EVLVRTRAVSINPLDTRMRSGYGR
Sbjct: 20  RFIVTT-CRAVVLPRFGGPHVLELRPDAPVPDLKPTEVLVRTRAVSINPLDTRMRSGYGR 78

Query: 82  SIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELT 141
           SIF PLLPLILGRDISGEVAA GASVRSL+VGQEVFGALHPTAVRGTYADYA+LSEDELT
Sbjct: 79  SIFGPLLPLILGRDISGEVAATGASVRSLSVGQEVFGALHPTAVRGTYADYAILSEDELT 138

Query: 142 PKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH 201
            KPVS++H +ASAIPFAALTAWRALK  AR++EGQR+L++GGGGAVGFAA+Q  VA+GCH
Sbjct: 139 SKPVSISHVEASAIPFAALTAWRALKSTARIAEGQRILIVGGGGAVGFAAIQLCVATGCH 198

Query: 202 VSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRG 261
           VS TCGS+S+  +LAAGAEQAVDY+S+DIE A+KG FDAVLDTIG P+TER+G+N LKRG
Sbjct: 199 VSTTCGSQSLAWILAAGAEQAVDYTSEDIESALKGNFDAVLDTIGVPDTERVGINLLKRG 258

Query: 262 GHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGI 304
           GHYMTL GE A+L+D YGLA+GLP AT +LLKK++Q  +S+GI
Sbjct: 259 GHYMTLQGEAASLSDRYGLAVGLPAATAMLLKKQLQYRFSHGI 301

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142942|emb|CBI20237.3| unnamed protein product [Vitis vinifera]

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 224/283 (79%), Positives = 256/283 (90%), Gaps = 1/283 (0%)

Query: 22  RFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGR 81
           RF+VTT CRAVVLPRFGGP VLE+RP+  VPDLKP EVLVRTRAVSINPLDTRMRSGYGR
Sbjct: 55  RFIVTT-CRAVVLPRFGGPHVLELRPDAPVPDLKPTEVLVRTRAVSINPLDTRMRSGYGR 113

Query: 82  SIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELT 141
           SIF PLLPLILGRDISGEVAA GASVRSL+VGQEVFGALHPTAVRGTYADYA+LSEDELT
Sbjct: 114 SIFGPLLPLILGRDISGEVAATGASVRSLSVGQEVFGALHPTAVRGTYADYAILSEDELT 173

Query: 142 PKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH 201
            KPVS++H +ASAIPFAALTAWRALK  AR++EGQR+L++GGGGAVGFAA+Q  VA+GCH
Sbjct: 174 SKPVSISHVEASAIPFAALTAWRALKSTARIAEGQRILIVGGGGAVGFAAIQLCVATGCH 233

Query: 202 VSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRG 261
           VS TCGS+S+  +LAAGAEQAVDY+S+DIE A+KG FDAVLDTIG P+TER+G+N LKRG
Sbjct: 234 VSTTCGSQSLAWILAAGAEQAVDYTSEDIESALKGNFDAVLDTIGVPDTERVGINLLKRG 293

Query: 262 GHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGI 304
           GHYMTL GE A+L+D YGLA+GLP AT +LLKK++Q  +S+GI
Sbjct: 294 GHYMTLQGEAASLSDRYGLAVGLPAATAMLLKKQLQYRFSHGI 336

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061278|ref|XP_002300404.1| predicted protein [Populus trichocarpa] gi|222847662|gb|EEE85209.1| predicted protein [Populus trichocarpa]

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 224/284 (78%), Positives = 253/284 (89%), Gaps = 1/284 (0%)

Query: 21  VRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYG 80
           VRF + TSCRAVVLPRFGGPE+L++R +VEVP LKPNEVLVR RAVSINPLDTRMRSGYG
Sbjct: 1   VRF-IATSCRAVVLPRFGGPEMLQLRSDVEVPQLKPNEVLVRARAVSINPLDTRMRSGYG 59

Query: 81  RSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDEL 140
           RSIFEPLLPLILGRDISGEVAAVG SVRS +VG+EVFGALHPTAVRGTY DYAVLSEDEL
Sbjct: 60  RSIFEPLLPLILGRDISGEVAAVGNSVRSFSVGEEVFGALHPTAVRGTYTDYAVLSEDEL 119

Query: 141 TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC 200
            PKP S+TH +ASAIPFAALTAWRALK  AR++EGQR+LV+GGGGAVG AA+Q + A+ C
Sbjct: 120 APKPPSLTHVEASAIPFAALTAWRALKSTARITEGQRILVVGGGGAVGLAAIQLAAAARC 179

Query: 201 HVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKR 260
           HV+ TCG +SIDRVL AGAEQAVDY+++DIELAIKGKFDAVLDTIG PETER+G+ FLKR
Sbjct: 180 HVTTTCGGQSIDRVLEAGAEQAVDYTAEDIELAIKGKFDAVLDTIGVPETERIGIKFLKR 239

Query: 261 GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGI 304
           GGHYMTL GE A+L D YGL  GLP+AT +LLKK++Q  YS+GI
Sbjct: 240 GGHYMTLQGEAASLTDRYGLVAGLPMATAILLKKQIQYRYSHGI 283

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357136468|ref|XP_003569826.1| PREDICTED: reticulon-4-interacting protein 1, mitochondrial-like [Brachypodium distachyon]

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 208/277 (75%), Positives = 238/277 (85%)

Query: 28  SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPL 87
           S RAV++PRFGGPEVLE+R  V VPDLKP EVLVR RAVSINPLD RMRSGYGR IFEPL
Sbjct: 28  SSRAVLVPRFGGPEVLELRQGVPVPDLKPGEVLVRARAVSINPLDLRMRSGYGRCIFEPL 87

Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSV 147
           LPLILGRDISGEVAA G SV S  +GQEVFGALHPTA+RGT ADYA+LS+DELTPKP  +
Sbjct: 88  LPLILGRDISGEVAATGTSVSSFFIGQEVFGALHPTAMRGTCADYAILSQDELTPKPSML 147

Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG 207
           TH +ASAIPFAALTAWRAL   A +SEGQR+LV+GGGGAVG +AVQ +VA+GC VSATCG
Sbjct: 148 THVEASAIPFAALTAWRALHGTAGISEGQRVLVIGGGGAVGLSAVQLAVAAGCSVSATCG 207

Query: 208 SKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
           ++SI++VLAAGAE+A+DY+S+D E A+ GKFDAVLDTIG PETER+G+N L+RGGHYMTL
Sbjct: 208 AQSIEQVLAAGAEKAIDYTSEDTESAVTGKFDAVLDTIGVPETERIGINLLRRGGHYMTL 267

Query: 268 HGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGI 304
            GE AALAD YGL +GLP AT  LLKK+MQ   S+GI
Sbjct: 268 QGEAAALADRYGLYVGLPAATATLLKKQMQYRCSHGI 304

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544066|ref|XP_003540476.1| PREDICTED: reticulon-4-interacting protein 1, mitochondrial-like [Glycine max]

 Score =  419 bits (1076), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 206/278 (74%), Positives = 250/278 (89%)

Query: 27  TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEP 86
           + CRAV+LP FGGP VL++R +V VP LKP++VLVR RAVS+NPLDTRMR+GYGRSIFEP
Sbjct: 27  SDCRAVLLPSFGGPHVLQLRSHVPVPPLKPHDVLVRARAVSVNPLDTRMRAGYGRSIFEP 86

Query: 87  LLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVS 146
           LLPLILGRD+SGEV+AVG  VRS++VG++VFGALHPTAVRGTY+DYA+LSE+E+TPKP S
Sbjct: 87  LLPLILGRDVSGEVSAVGDKVRSVSVGEQVFGALHPTAVRGTYSDYAILSEEEVTPKPDS 146

Query: 147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC 206
           +TH +ASAIPFAALTAWRALK  AR+SEGQR+LV+GGGGAVG +AVQ +VA+GC V+ TC
Sbjct: 147 LTHVEASAIPFAALTAWRALKSTARISEGQRILVVGGGGAVGLSAVQLAVAAGCSVATTC 206

Query: 207 GSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMT 266
           GS+S+DR+LAAGA+QAVDY ++D+ELAIKGKFDAVLDTIG PETER+G+NFLKRGGHYMT
Sbjct: 207 GSQSVDRLLAAGADQAVDYVAEDVELAIKGKFDAVLDTIGVPETERMGINFLKRGGHYMT 266

Query: 267 LHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGI 304
           L GE A+L+D YGL +GLP AT VLLKK++   +S+GI
Sbjct: 267 LQGEAASLSDRYGLTIGLPAATAVLLKKQLLYRFSHGI 304

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15232485|ref|NP_188127.1| GroES-like zinc-binding alcohol dehydrogenase family protein [Arabidopsis thaliana] gi|8777492|dbj|BAA97072.1| oxidoreductase-like protein [Arabidopsis thaliana] gi|15810047|gb|AAL06950.1| AT3g15090/K15M2_24 [Arabidopsis thaliana] gi|22135769|gb|AAM91041.1| AT3g15090/K15M2_24 [Arabidopsis thaliana] gi|332642094|gb|AEE75615.1| GroES-like zinc-binding alcohol dehydrogenase family protein [Arabidopsis thaliana]

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 200/280 (71%), Positives = 248/280 (88%)

Query: 25  VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
           V T CRAV+LPRFGGPEV E+R NV VP+L PNEVLV+ +AVS+NPLD R+R+GYGRS+F
Sbjct: 28  VFTGCRAVILPRFGGPEVFELRENVPVPNLNPNEVLVKAKAVSVNPLDCRIRAGYGRSVF 87

Query: 85  EPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKP 144
           +P LP+I+GRD+SGEVAA+G SV+SL VGQEVFGALHPTA+RGTY DY +LSEDELT KP
Sbjct: 88  QPHLPIIVGRDVSGEVAAIGTSVKSLKVGQEVFGALHPTALRGTYTDYGILSEDELTEKP 147

Query: 145 VSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA 204
            S++H +ASAIPFAALTAWRALK  AR++EGQRLLV GGGGAVGF+A+Q +VASGCHV+A
Sbjct: 148 SSISHVEASAIPFAALTAWRALKSNARITEGQRLLVFGGGGAVGFSAIQLAVASGCHVTA 207

Query: 205 TCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHY 264
           +C  ++ DR+LAAGAEQAVDY+++DIELA+KGKFDAVLDTIG PETER+G+NFL++GG+Y
Sbjct: 208 SCVGQTKDRILAAGAEQAVDYTTEDIELAVKGKFDAVLDTIGGPETERIGINFLRKGGNY 267

Query: 265 MTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGI 304
           MTL GE A+L D YG  +GLP+AT++L+KK++Q  YS+GI
Sbjct: 268 MTLQGEAASLTDKYGFVVGLPLATSLLMKKKIQYQYSHGI 307

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21592930|gb|AAM64880.1| zinc-binding dehydrogenase, putative [Arabidopsis thaliana]

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 200/280 (71%), Positives = 248/280 (88%)

Query: 25  VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
           V T CRAV+LPRFGGPEV E+R NV VP+L PNEVLV+ +AVS+NPLD R+R+GYGRS+F
Sbjct: 28  VFTGCRAVILPRFGGPEVFELRENVPVPNLNPNEVLVKAKAVSVNPLDCRIRAGYGRSVF 87

Query: 85  EPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKP 144
           +P LP+I+GRD+SGEVAA+G SV+SL VGQEVFGALHPTA+RGTY DY +LSEDELT KP
Sbjct: 88  QPHLPIIVGRDVSGEVAAIGTSVKSLKVGQEVFGALHPTALRGTYTDYGILSEDELTEKP 147

Query: 145 VSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA 204
            S++H +ASAIPFAALTAWRALK  AR++EGQRLLV GGGGAVGF+A+Q +VASGCHV+A
Sbjct: 148 SSISHVEASAIPFAALTAWRALKSNARITEGQRLLVFGGGGAVGFSAIQLAVASGCHVTA 207

Query: 205 TCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHY 264
           +C  ++ DR+LAAGAEQAVDY+++DIELA+KGKFDAVLDTIG PETER+G+NFL++GG+Y
Sbjct: 208 SCVGQTKDRILAAGAEQAVDYTTEDIELAVKGKFDAVLDTIGGPETERIGINFLRKGGNY 267

Query: 265 MTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGI 304
           MTL GE A+L D YG  +GLP+AT++L+KK++Q  YS+GI
Sbjct: 268 MTLQGEAASLTDKYGFVVGLPLATSLLMKKKIQYQYSHGI 307

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546840|ref|XP_003541830.1| PREDICTED: reticulon-4-interacting protein 1 homolog, mitochondrial-like [Glycine max]

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 205/278 (73%), Positives = 247/278 (88%)

Query: 27  TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEP 86
           + CRAV+LP FGGP +L++R +V VP LK ++VLVR RAVS+NPLDTRMR+GYGRSIFE 
Sbjct: 27  SDCRAVLLPSFGGPHLLQLRSHVPVPPLKSHDVLVRARAVSVNPLDTRMRAGYGRSIFER 86

Query: 87  LLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVS 146
           LLP+ILGRD+SGEVAAVG  VR ++VG++VFGALHPTAVRGTYADYA+LSE+E+TPKP S
Sbjct: 87  LLPIILGRDVSGEVAAVGDKVRLVSVGEQVFGALHPTAVRGTYADYAILSEEEVTPKPDS 146

Query: 147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC 206
           +TH +ASAIPFAALTAWRALK  AR+SEGQR+LV+GGGGAVG +AVQF+VA+GC V  TC
Sbjct: 147 LTHVEASAIPFAALTAWRALKSTARISEGQRILVVGGGGAVGLSAVQFAVAAGCSVVTTC 206

Query: 207 GSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMT 266
           GS+S+DR+LAAGAEQAVDY ++D+ELAIKGKFDAVLDTIG PETER+G+NFLKRGGHYMT
Sbjct: 207 GSQSVDRLLAAGAEQAVDYIAEDVELAIKGKFDAVLDTIGMPETERMGINFLKRGGHYMT 266

Query: 267 LHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGI 304
           L GE A+L+D YGL +GLP AT VLLKK++   +S+GI
Sbjct: 267 LQGEAASLSDRYGLIIGLPAATAVLLKKQLLYRFSHGI 304

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297830062|ref|XP_002882913.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata] gi|297328753|gb|EFH59172.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 202/280 (72%), Positives = 246/280 (87%)

Query: 25  VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
           V T CRAV+LPRFGGPEV E+R NV VP+L PNEVLVR +AVS+NPLD R+R+GYGRS+F
Sbjct: 25  VFTGCRAVMLPRFGGPEVFELRENVPVPNLNPNEVLVRAKAVSVNPLDCRIRAGYGRSVF 84

Query: 85  EPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKP 144
           +P LP+I+GRDISGEVAA+G SV+SL VGQEVFGALHPTA+RGTY DY +LSEDELT KP
Sbjct: 85  QPHLPIIVGRDISGEVAAIGTSVKSLKVGQEVFGALHPTALRGTYTDYGILSEDELTEKP 144

Query: 145 VSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA 204
            SV+H  ASAIPFAALTA RALK  AR++EGQRLLV GGGGAVGF+A+Q +VASGCHV+A
Sbjct: 145 SSVSHVVASAIPFAALTACRALKSNARITEGQRLLVFGGGGAVGFSAIQLAVASGCHVTA 204

Query: 205 TCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHY 264
           +C  ++ DR+LAAGAEQAVDY+++DIELA+KGKFDAVLDTIG PETER+G+NFL++GG+Y
Sbjct: 205 SCVGQTKDRILAAGAEQAVDYTTEDIELAVKGKFDAVLDTIGGPETERIGINFLRKGGNY 264

Query: 265 MTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGI 304
           MTL GE A+L D YG  +GLP+AT++L+KK++Q  YS+GI
Sbjct: 265 MTLQGEAASLTDKYGFVVGLPLATSLLMKKKIQYQYSHGI 304

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	307
TAIR|locus:2086335	366	AT3G15090 [Arabidopsis thalian	0.912	0.765	0.671	2.6e-102
MGI|MGI:2178759	396	Rtn4ip1 "reticulon 4 interacti	0.885	0.686	0.344	2.1e-36
RGD|1563384	396	Rtn4ip1 "reticulon 4 interacti	0.885	0.686	0.347	2.1e-36
UNIPROTKB|Q0VC50	396	RTN4IP1 "Reticulon-4-interacti	0.885	0.686	0.344	4.4e-36
UNIPROTKB|F6V4D2	426	RTN4IP1 "Uncharacterized prote	0.885	0.638	0.341	9.2e-36
UNIPROTKB|F1RT47	396	LOC100627610 "Uncharacterized	0.885	0.686	0.344	1.2e-35
UNIPROTKB|I3LFW7	362	LOC100627610 "Uncharacterized	0.885	0.751	0.344	1.2e-35
UNIPROTKB|E2QRQ9	397	RTN4IP1 "Uncharacterized prote	0.885	0.685	0.340	8.3e-35
UNIPROTKB|Q8WWV3	396	RTN4IP1 "Reticulon-4-interacti	0.885	0.686	0.337	2.2e-34
ZFIN|ZDB-GENE-040426-1314	387	rtn4ip1 "reticulon 4 interacti	0.837	0.664	0.339	5.2e-33

TAIR|locus:2086335 AT3G15090 [Arabidopsis thaliana (taxid:3702)]

 Score = 1014 (362.0 bits), Expect = 2.6e-102, P = 2.6e-102
 Identities = 188/280 (67%), Positives = 234/280 (83%)

Query:    25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
             V T CRAV+LPRFGGPEV E+R NV VP+L PNEVLV+ +AVS+NPLD R+R+GYGRS+F
Sbjct:    28 VFTGCRAVILPRFGGPEVFELRENVPVPNLNPNEVLVKAKAVSVNPLDCRIRAGYGRSVF 87

Query:    85 EPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKP 144
             +P LP+I+GRD+SGEVAA+G SV+SL VGQEVFGALHPTA+RGTY DY +LSEDELT KP
Sbjct:    88 QPHLPIIVGRDVSGEVAAIGTSVKSLKVGQEVFGALHPTALRGTYTDYGILSEDELTEKP 147

Query:   145 VSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSA 204
              S++H +ASAIPFAALTAWRALK  AR++EGQR               Q +VASGCHV+A
Sbjct:   148 SSISHVEASAIPFAALTAWRALKSNARITEGQRLLVFGGGGAVGFSAIQLAVASGCHVTA 207

Query:   205 TCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHY 264
             +C  ++ DR+LAAGAEQAVDY+++DIELA+KGKFDAVLDTIG PETER+G+NFL++GG+Y
Sbjct:   208 SCVGQTKDRILAAGAEQAVDYTTEDIELAVKGKFDAVLDTIGGPETERIGINFLRKGGNY 267

Query:   265 MTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGI 304
             MTL GE A+L D YG  +GLP+AT++L+KK++Q  YS+GI
Sbjct:   268 MTLQGEAASLTDKYGFVVGLPLATSLLMKKKIQYQYSHGI 307

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

MGI|MGI:2178759 Rtn4ip1 "reticulon 4 interacting protein 1" [Mus musculus (taxid:10090)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 102/296 (34%), Positives = 151/296 (51%)

Query:    26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
             +T   A V+ ++G  EVL    N+ +P +  PNEV+++  A S+NP+D  MRSGYG +  
Sbjct:    40 STVMPAWVIDKYGKNEVLRFTQNMMLPIIHYPNEVIIKVHAASVNPIDVNMRSGYGATAL 99

Query:    85 ----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADY 132
                 +PL         PL LGRD+SG V   G  V+    G EV+ A+ P   +GT +++
Sbjct:   100 NMKRDPLHMKTKGEEFPLTLGRDVSGVVMECGLDVKYFQPGDEVWAAVPPWK-QGTLSEF 158

Query:   133 AVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRXXXXXXXXXXX 188
              V+S +E++ KP S+TH  A+++P+ ALTAW A+     +S+    G+R           
Sbjct:   159 VVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLSDKNCKGKRALILGASGGVG 218

Query:   189 XXXXQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGK--FDAVLDTIG 246
                 Q   A G HV+A C   + + V   GA++ +DY+   +E  +K    FD +LD +G
Sbjct:   219 TFAIQVMKAWGAHVTAVCSKDASELVRKLGADEVIDYTLGSVEEQLKSLKLFDFILDNVG 278

Query:   247 APETERLGLNFLKR--GGHYMTLHGETAALADHYGLALG-LPIATTVLLKKRMQTW 299
                TE   LNFLK+  G  Y+TL        D  G+A G L    TV  K     W
Sbjct:   279 G-STETWALNFLKKWSGATYVTLVTPFLLNMDRLGVADGMLQTGVTVGTKALKHLW 333

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

RGD|1563384 Rtn4ip1 "reticulon 4 interacting protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 103/296 (34%), Positives = 150/296 (50%)

Query:    26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
             +T   A V+ ++G  EVL    N+ +P +  PNEV+++  A S+NP+D  MRSGYG +  
Sbjct:    40 STVMPAWVIDKYGKNEVLRFTQNMMLPIIHYPNEVIIKVHAASVNPIDVNMRSGYGATAL 99

Query:    85 ----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADY 132
                 +PL         PL LGRD+SG V   G  VR    G EV+ A+ P   +GT +++
Sbjct:   100 NMKRDPLHMKTKGEEFPLTLGRDVSGVVMECGLDVRYFQPGDEVWAAVPPWK-QGTLSEF 158

Query:   133 AVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCA----ARMSEGQRXXXXXXXXXXX 188
              V+S +E++ KP S+TH  A+++P+ ALTAW A+       A+   G+R           
Sbjct:   159 VVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNAKNCMGKRALILGASGGVG 218

Query:   189 XXXXQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGK--FDAVLDTIG 246
                 Q   A G HV+A C   + + V   GA++ +DY+   +E  +K    FD +LD +G
Sbjct:   219 TFAIQVMKAWGAHVTAVCSKDASELVRKLGADEVIDYTMGSVEEQLKSLKLFDFILDNVG 278

Query:   247 APETERLGLNFLKR--GGHYMTLHGETAALADHYGLALG-LPIATTVLLKKRMQTW 299
                TE   LNFLK+  G  Y+TL        D  G+A G L    TV  K     W
Sbjct:   279 G-STETWALNFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGTKALKHLW 333

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|Q0VC50 RTN4IP1 "Reticulon-4-interacting protein 1, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
 Identities = 102/296 (34%), Positives = 149/296 (50%)

Query:    26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
             +T   A V+ ++G  EVL    N+ +P +  PNEV+++  A SINP+D  MRSGYG +  
Sbjct:    40 STVMPAWVIDKYGSNEVLRFTQNMMIPMIHYPNEVIIKVHAASINPIDVNMRSGYGATAL 99

Query:    85 ----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADY 132
                 +PL         PL LGRD+SG V   G  VR    G EV+ A+ P   +GT +++
Sbjct:   100 NMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVPPWK-QGTLSEF 158

Query:   133 AVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRXXXXXXXXXXX 188
              V+S +E++ KP S+TH  A+++P+ ALTAW A+     +++    G+R           
Sbjct:   159 VVVSGNEVSHKPRSLTHTQAASLPYVALTAWSAINKVGGLNDRNCTGKRVLILGASGGVG 218

Query:   189 XXXXQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGK--FDAVLDTIG 246
                 Q   A   HV+A C   + + V   GA+  +DY S ++E  +K    FD +LD +G
Sbjct:   219 TFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNVEAQLKSSKPFDFILDNVG 278

Query:   247 APETERLGLNFLKR--GGHYMTLHGETAALADHYGLALG-LPIATTVLLKKRMQTW 299
                TE   L FLK+  G  Y+TL        D  G+A G L    TV  K     W
Sbjct:   279 G-STETWALKFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKTLKHFW 333

GO:0005739 "mitochondrion" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F6V4D2 RTN4IP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
 Identities = 101/296 (34%), Positives = 150/296 (50%)

Query:    26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
             +T   A V+ ++G  EVL    N+ +P +  PNEV+++  A S+NP+D  MRSGYG +  
Sbjct:    70 STVMPAWVIDKYGKNEVLRFTQNMMIPVIHYPNEVIIKVHAASVNPIDVNMRSGYGATAL 129

Query:    85 ----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADY 132
                 +PL         PL LGRD+SG V   G  VR    G EV+ A+ P   +GT +++
Sbjct:   130 NMKRDPLHIKTKGEEFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVPPWK-QGTLSEF 188

Query:   133 AVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRXXXXXXXXXXX 188
              V++ +E++ KP S+TH  A+++P+ ALTAW A+     +++    G+R           
Sbjct:   189 VVVNGNEVSLKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVG 248

Query:   189 XXXXQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKG--KFDAVLDTIG 246
                 Q   A   HV+A C   + + V   GA+  +DY S ++E  +K    FD +LD +G
Sbjct:   249 TFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNVEEQLKSLKPFDFILDNVG 308

Query:   247 APETERLGLNFLKR--GGHYMTLHGETAALADHYGLALG-LPIATTVLLKKRMQTW 299
                TE   LNFLK+  G  Y+TL        D  G+A G L    TV  K     W
Sbjct:   309 G-STETWALNFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFW 363

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1RT47 LOC100627610 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 102/296 (34%), Positives = 150/296 (50%)

Query:    26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
             +T   A V+ ++G  EVL    N+ +P +  PNEV+++  A SINP+D  MRSGYG +  
Sbjct:    40 STVMPAWVIDKYGNNEVLRFTQNMMLPMIHYPNEVVIKVHAASINPIDVNMRSGYGATAL 99

Query:    85 ----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADY 132
                 +PL         PL LGRD+SG V   G  V+    G EV+ A+ P   +GT +++
Sbjct:   100 NMKRDPLHIRIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWK-QGTLSEF 158

Query:   133 AVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRXXXXXXXXXXX 188
              V+S +E++ KP S+TH  A+++P+ ALTAW A+     +++    G+R           
Sbjct:   159 VVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCRGKRVLILGASGGVG 218

Query:   189 XXXXQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKG--KFDAVLDTIG 246
                 Q   A   HV+A C   + + V   GA+  +DY S ++E  +K    FD +LD +G
Sbjct:   219 TFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNMEEQLKSFKPFDFILDNVG 278

Query:   247 APETERLGLNFLKR--GGHYMTLHGETAALADHYGLALG-LPIATTVLLKKRMQTW 299
                TE   LNFLK+  G  Y+TL        D  G+A G L    TV  K     W
Sbjct:   279 G-STETWALNFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKTLKHFW 333

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|I3LFW7 LOC100627610 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 102/296 (34%), Positives = 150/296 (50%)

Query:    26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
             +T   A V+ ++G  EVL    N+ +P +  PNEV+++  A SINP+D  MRSGYG +  
Sbjct:    40 STVMPAWVIDKYGNNEVLRFTQNMMLPMIHYPNEVVIKVHAASINPIDVNMRSGYGATAL 99

Query:    85 ----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADY 132
                 +PL         PL LGRD+SG V   G  V+    G EV+ A+ P   +GT +++
Sbjct:   100 NMKRDPLHIRIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWK-QGTLSEF 158

Query:   133 AVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRXXXXXXXXXXX 188
              V+S +E++ KP S+TH  A+++P+ ALTAW A+     +++    G+R           
Sbjct:   159 VVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCRGKRVLILGASGGVG 218

Query:   189 XXXXQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKG--KFDAVLDTIG 246
                 Q   A   HV+A C   + + V   GA+  +DY S ++E  +K    FD +LD +G
Sbjct:   219 TFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNMEEQLKSFKPFDFILDNVG 278

Query:   247 APETERLGLNFLKR--GGHYMTLHGETAALADHYGLALG-LPIATTVLLKKRMQTW 299
                TE   LNFLK+  G  Y+TL        D  G+A G L    TV  K     W
Sbjct:   279 G-STETWALNFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKTLKHFW 333

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|E2QRQ9 RTN4IP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
 Identities = 101/297 (34%), Positives = 151/297 (50%)

Query:    26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
             +T   A V+ ++G  EVL    N+ +P +  PNEV+++  A S+NP+D  MRSGYG +  
Sbjct:    40 STVMPAWVIDKYGKNEVLRFTQNMMIPVIHYPNEVIIKVHAASVNPIDVNMRSGYGATAL 99

Query:    85 ----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADY 132
                 +PL         PL LGRD+SG V   G  VR    G EV+ A+ P   +GT +++
Sbjct:   100 NMKRDPLHIKTKGEEFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVPPWK-QGTLSEF 158

Query:   133 AVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRXXXXXXXXXXX 188
              V++ +E++ KP S+TH  A+++P+ ALTAW A+     +++    G+R           
Sbjct:   159 VVVNGNEVSLKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVG 218

Query:   189 XXXXQFSV-ASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKG--KFDAVLDTI 245
                 Q  + A   HV+A C   + + V   GA+  +DY S ++E  +K    FD +LD +
Sbjct:   219 TFAIQQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGNVEEQLKSLKPFDFILDNV 278

Query:   246 GAPETERLGLNFLKR--GGHYMTLHGETAALADHYGLALG-LPIATTVLLKKRMQTW 299
             G   TE   LNFLK+  G  Y+TL        D  G+A G L    TV  K     W
Sbjct:   279 GG-STETWALNFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFW 334

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q8WWV3 RTN4IP1 "Reticulon-4-interacting protein 1, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
 Identities = 100/296 (33%), Positives = 148/296 (50%)

Query:    26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
             +T   A V+ ++G  EVL    N+ +P +  PNEV+V+  A S+NP+D  MRSGYG +  
Sbjct:    40 STVMPAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATAL 99

Query:    85 ----EPL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADY 132
                 +PL         PL LGRD+SG V   G  V+    G EV+ A+ P   +GT +++
Sbjct:   100 NMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWK-QGTLSEF 158

Query:   133 AVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRXXXXXXXXXXX 188
              V+S +E++ KP S+TH  A+++P+ ALTAW A+     +++    G+R           
Sbjct:   159 VVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVG 218

Query:   189 XXXXQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKG--KFDAVLDTIG 246
                 Q   A   HV+A C   + + V   GA+  +DY S  +E  +K    FD +LD +G
Sbjct:   219 TFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVG 278

Query:   247 APETERLGLNFLKR--GGHYMTLHGETAALADHYGLALG-LPIATTVLLKKRMQTW 299
                TE    +FLK+  G  Y+TL        D  G+A G L    TV  K     W
Sbjct:   279 G-STETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFW 333

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

ZFIN|ZDB-GENE-040426-1314 rtn4ip1 "reticulon 4 interacting protein 1" [Danio rerio (taxid:7955)]

 Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
 Identities = 96/283 (33%), Positives = 151/283 (53%)

Query:    31 AVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF----E 85
             A V+ ++G  +VL    N  +P +  PNEV+V+  A  +NP+D  MR GYG +      +
Sbjct:    31 AWVIDKYGKNDVLRFTKNAALPIIHYPNEVVVKVHAAGLNPIDISMRGGYGAATMAMKRD 90

Query:    86 PL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSE 137
             PL         PLILGRD+SGE+   G  V+    G +V+ A+ P   +G+ A++ V+S 
Sbjct:    91 PLNISQSGGEFPLILGRDVSGEIMECGLDVKYFKPGDQVWAAIPPWK-QGSLAEFVVVSG 149

Query:   138 DELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSV- 196
             +E++ KP S+ H +A++IP+ A TAW A+     +++                   F++ 
Sbjct:   150 NEVSHKPKSLRHDEAASIPYVAATAWSAIVNTGGLNKDNSAKKRVLILGGSGGVGTFAIQ 209

Query:   197 ---ASGCHVSATCGSKSIDRVLA-AGAEQAVDYSSKDIELAIKG--KFDAVLDTIGAPET 250
                A G HV+ TC S++ +R++   GA+  VDY++  +E  +K   KFD +LD+IG  ET
Sbjct:   210 MVKAWGAHVTVTC-SQNAERLVRDLGADDVVDYTAGPVEKQLKNLEKFDLILDSIGG-ET 267

Query:   251 ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGL-PIATTV 290
             E+  L+ LK   G  ++TL        D  GLA G+   A TV
Sbjct:   268 EKWALDLLKPWSGAKFVTLITPFLQNTDRLGLADGMMQSAVTV 310

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.1.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00027760001 SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (361 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	307
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	3e-79
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	4e-78
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	6e-69
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	7e-58
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	3e-57
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	7e-55
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	1e-52
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	8e-52
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	1e-50
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	2e-48
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	3e-45
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	3e-43
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	4e-42
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	2e-40
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	3e-39
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	7e-39
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	2e-38
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	4e-37
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	2e-35
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	1e-34
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	3e-31
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	8e-31
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	1e-30
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	7e-30
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	4e-29
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	3e-28
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	7e-28
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	2e-27
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	8e-26
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	8e-26
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	9e-26
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	4e-24
smart00829	287	smart00829, PKS_ER, Enoylreductase	1e-23
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	1e-22
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	3e-22
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	4e-22
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	1e-21
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	1e-20
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	2e-20
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	1e-18
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	2e-18
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	3e-18
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	7e-18
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	1e-17
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	2e-17
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	2e-17
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	6e-17
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	1e-16
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	2e-16
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	3e-16
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	9e-16
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	2e-15
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	8e-15
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	1e-14
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	2e-14
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	1e-13
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	1e-13
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	6e-13
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	1e-12
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	2e-12
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	2e-12
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	5e-12
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	9e-12
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	1e-11
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	1e-10
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	6e-10
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	9e-10
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	2e-09
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	3e-09
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	8e-09
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	1e-08
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	3e-08
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	4e-08
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	4e-08
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	6e-08
cd05281	341	cd05281, TDH, Threonine dehydrogenase	1e-07
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	2e-07
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	3e-07
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	6e-07
cd08288	324	cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu	1e-06
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	2e-06
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	2e-06
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	1e-05
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	3e-05
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	1e-04
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	1e-04
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	2e-04
cd08295	338	cd08295, double_bond_reductase_like, Arabidopsis a	4e-04
cd08293	345	cd08293, PTGR2, Prostaglandin reductase	4e-04
pfam13602	129	pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenas	6e-04
COG2145	265	COG2145, ThiM, Hydroxyethylthiazole kinase, sugar	7e-04
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	8e-04
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	0.001
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	0.001
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	0.002
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	0.002
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	0.002

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score =  244 bits (624), Expect = 3e-79
 Identities = 113/301 (37%), Positives = 176/301 (58%), Gaps = 26/301 (8%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSIF---- 84
           +A  +  +GG + L +  N  +P + KPN+VL++  A S+NP+D  MRSGYGR++     
Sbjct: 2   KAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKR 61

Query: 85  --------EPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLS 136
                       PL LGRD SG V  +G+ V+S  +G EV+GA+ P   +GT+A+Y V+ 
Sbjct: 62  KPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPP-WSQGTHAEYVVVP 120

Query: 137 EDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRLLVLGGGGAVGFAAV 192
           E+E++ KP +++H +A+++P+A LTAW AL     ++     G+R+L+LGG G VG  A+
Sbjct: 121 ENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAI 180

Query: 193 QFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK--GKFDAVLDTIGAPET 250
           Q   A G HV+ TC + +I  V + GA+  +DY+++D E  +   GKFD +LDT+G  +T
Sbjct: 181 QLLKAWGAHVTTTCSTDAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVILDTVG-GDT 239

Query: 251 ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ-----TWYSYGIG 305
           E+  L  LK+GG Y+TL        D  GL  G+  +   LLKK ++     + Y +G  
Sbjct: 240 EKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFF 299

Query: 306 C 306
            
Sbjct: 300 S 300

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  239 bits (613), Expect = 4e-78
 Identities = 98/239 (41%), Positives = 138/239 (57%), Gaps = 4/239 (1%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +AV +  +GGPEVLE+   V  P+  P EVLV+  A  +NP+D ++R G  ++ F   LP
Sbjct: 2   KAVRIHEYGGPEVLELAD-VPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLP 60

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTH 149
           LI G D++G V AVG  V    VG EVFG    T   G YA+Y V+  DEL  KP +++ 
Sbjct: 61  LIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPFTR-GGAYAEYVVVPADELALKPANLSF 119

Query: 150 ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK 209
            +A+A+P A LTAW+AL     +  GQ +L+ G  G VG  AVQ + A G  V AT  + 
Sbjct: 120 EEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA 179

Query: 210 SIDRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
           + D + + GA++ +DY+  D E A   G  DAVLDT+G     R  L  +K GG  +++
Sbjct: 180 NADFLRSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGGETLARS-LALVKPGGRLVSI 237

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  216 bits (553), Expect = 6e-69
 Identities = 93/240 (38%), Positives = 135/240 (56%), Gaps = 5/240 (2%)

Query: 32  VVLPRFGGPEVLEVR-PNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPL 90
           VV  R+G PEVL +    V +P  KP EVLV+  A S+NP+D ++R G  + +     P 
Sbjct: 1   VVYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPP 60

Query: 91  ILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHA 150
           I G D +GEV AVG+ V    VG EVFG L P    G  A+Y V  E  L  KP  V+  
Sbjct: 61  IPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPKG-GGALAEYVVAPESGLAKKPEGVSFE 119

Query: 151 DASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS 210
           +A+A+P A LTA +AL+ A ++  GQR+L+ G  G VG  AVQ + A G HV+  C +++
Sbjct: 120 EAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCSTRN 179

Query: 211 IDRVLAAGAEQAVDYSSKDIELAIKG--KFDAVLDTIGAPETERLG-LNFLKRGGHYMTL 267
            + V + GA++ +DY+++D      G  K+D + D +G            LK GG Y+++
Sbjct: 180 AELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSV 239

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  188 bits (480), Expect = 7e-58
 Identities = 87/225 (38%), Positives = 122/225 (54%), Gaps = 14/225 (6%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A+VL  FGGPEV E+R  V  P   P +VLVR  A  +NPLDT++R G       P LP
Sbjct: 2   KALVLESFGGPEVFELR-EVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAA--ARPPLP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR---GTYADYAVLSEDELTPKPVS 146
            ILG D++G V AVG  V    VG EV+G      +    G+ A+YAV+    L  KP +
Sbjct: 59  AILGCDVAGVVEAVGEGVTRFRVGDEVYGC--AGGLGGLQGSLAEYAVVDARLLALKPAN 116

Query: 147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC 206
           ++  +A+A+P   +TAW  L   A +  GQ +L+ GG G VG  AVQ + A+G  V AT 
Sbjct: 117 LSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATA 176

Query: 207 GSKSIDRVLAAGAEQAVDYSSKDIELAIK----GK-FDAVLDTIG 246
            S+      + GA+  + Y  + +   +     G+ FD V DT+G
Sbjct: 177 SSEKAAFARSLGAD-PIIYYRETVVEYVAEHTGGRGFDVVFDTVG 220

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  186 bits (475), Expect = 3e-57
 Identities = 91/243 (37%), Positives = 128/243 (52%), Gaps = 11/243 (4%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +AVV+  FGGPEVL+V   V  P+  P EVLVR +A  +NP+D  +R G    +    LP
Sbjct: 2   KAVVVEEFGGPEVLKVVE-VPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRP--LP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTH 149
            I G + +G V AVG+ V    VG  V  AL      G YA+Y V+  D L P P  ++ 
Sbjct: 59  FIPGSEAAGVVVAVGSGVTGFKVGDRVA-ALGGVGRDGGYAEYVVVPADWLVPLPDGLSF 117

Query: 150 ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGS 208
            +A+A+P A LTAW AL   A +  G+ +LV G  G VG AA+Q + A G   V+    S
Sbjct: 118 EEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSS 177

Query: 209 KSIDRVLAAGAEQAVDYSSKDI-----ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGH 263
           + ++ +   GA+  ++Y  +D      EL      D VLDT+G  +T    L  L  GG 
Sbjct: 178 EKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGG-DTFAASLAALAPGGR 236

Query: 264 YMT 266
            ++
Sbjct: 237 LVS 239

Length = 326

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score =  181 bits (461), Expect = 7e-55
 Identities = 82/258 (31%), Positives = 123/258 (47%), Gaps = 26/258 (10%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A VL   GG  ++ V  +V VP   P+EVLV+ +AV++NP+D + +       F P  P
Sbjct: 2   KAAVLTGPGGGLLVVV--DVPVPKPGPDEVLVKVKAVALNPVDWKHQDYG----FIPSYP 55

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR----GTYADYAVLSEDELTPKPV 145
            ILG D +G V  VG+ V    VG  V G +H         G + +Y V   D     P 
Sbjct: 56  AILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPD 115

Query: 146 SVTHADASAIPFAALTAWRAL----------KCAARMSEGQRLLVLGGGGAVGFAAVQFS 195
           +++  +A+ +P   +TA  AL             +  S+G+ +L+ GG  +VG  A+Q +
Sbjct: 116 NISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLA 175

Query: 196 VASGCHVSATCGSKSIDRVLAAGAEQAVDYSS----KDIELAIKGKFDAVLDTIGAPETE 251
             +G  V  T   K+ D V + GA+   DY      +DI  A  GK    LD I  PE+ 
Sbjct: 176 KLAGYKVITTASPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPESA 235

Query: 252 RLGLNFLKR--GGHYMTL 267
           +L    L R  GG  ++L
Sbjct: 236 QLCAEALGRSGGGKLVSL 253

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  173 bits (440), Expect = 1e-52
 Identities = 74/236 (31%), Positives = 108/236 (45%), Gaps = 27/236 (11%)

Query: 58  EVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVF 117
           EVLVR  A  +   D  +R G       P LPLILG + +G V  VG  V  + VG  V 
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGYP--PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVV 58

Query: 118 GALHP-------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFA 158
              +                      + G +A+Y V+  D L P P  ++  +A+ +P  
Sbjct: 59  VLPNLGCGTCELCRELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEP 118

Query: 159 ALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAA 217
             TA+ AL+ A  +  G  +LVLG GG VG  A Q + A+G  V  T  S   ++     
Sbjct: 119 LATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKEL 177

Query: 218 GAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHG 269
           GA+  +DY  +D+E  ++    G  D V+D +G PET    L  L+ GG  + + G
Sbjct: 178 GADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGG 233

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score =  172 bits (439), Expect = 8e-52
 Identities = 87/241 (36%), Positives = 123/241 (51%), Gaps = 13/241 (5%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           RA+    FG P+VL +  ++ VP   P EVLVR  A  +NP+DT +R+G Y      P +
Sbjct: 2   RAIRYHEFGAPDVLRLG-DLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYV 60

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-GTYADYAVLSEDELTPKPVSV 147
           P   G D +G V AVG  V  L VG  V+        R GT A+Y V+  D+L P P  V
Sbjct: 61  P---GSDGAGVVEAVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGV 117

Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG 207
           +    +A+   ALTA+RAL   A    G+ +LV GG GAVG AAVQ +  +G  V AT  
Sbjct: 118 SFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATAS 177

Query: 208 S-KSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRG 261
           S +  + V  AGA+   +Y ++D+   I         D +++ +      +  L+ L  G
Sbjct: 178 SAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKD-LDVLAPG 236

Query: 262 G 262
           G
Sbjct: 237 G 237

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score =  170 bits (432), Expect = 1e-50
 Identities = 92/264 (34%), Positives = 129/264 (48%), Gaps = 37/264 (14%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +AVV+   GGPEVLE   ++  P+  P+EVLVR +A ++N LD  +R G      +  LP
Sbjct: 2   KAVVIRGHGGPEVLEYG-DLPEPEPGPDEVLVRVKAAALNHLDLWVRRG--MPGIKLPLP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHP-------------------------TA 124
            ILG D +G V AVG  V ++  GQ V   ++P                           
Sbjct: 59  HILGSDGAGVVEAVGPGVTNVKPGQRV--VIYPGISCGRCEYCLAGRENLCAQYGILGEH 116

Query: 125 VRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGG 184
           V G YA+Y  +    L P P +++  +A+A P   LTAW  L   AR+  G+ +LV G G
Sbjct: 117 VDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAG 176

Query: 185 GAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDI-----ELAIKGKF 238
             VG AA+Q +   G  V AT GS+  ++R    GA+  +DY  +D      EL  K   
Sbjct: 177 SGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGV 236

Query: 239 DAVLDTIGAPETERLGLNFLKRGG 262
           D V++ +GA  T    L  L RGG
Sbjct: 237 DVVVEHVGA-ATWEKSLKSLARGG 259

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score =  163 bits (416), Expect = 2e-48
 Identities = 83/244 (34%), Positives = 118/244 (48%), Gaps = 22/244 (9%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           +A+V+   GGPEVLE+   V  P   P EVL+R  A  +N  D   R G Y      P  
Sbjct: 2   KAIVIKEPGGPEVLELGE-VPKPAPGPGEVLIRVAAAGVNRADLLQRQGLY------PPP 54

Query: 89  P---LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPV 145
           P    ILG +++G V AVG  V    VG  V   L      G YA+Y V+   +L P P 
Sbjct: 55  PGASDILGLEVAGVVVAVGPGVTGWKVGDRVCALLAG----GGYAEYVVVPAGQLLPVPE 110

Query: 146 SVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT 205
            ++  +A+A+P    TAW+ L     +  G+ +L+ GG   VG AA+Q + A G  V AT
Sbjct: 111 GLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIAT 170

Query: 206 CGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKF-----DAVLDTIGAPETERLGLNFLK 259
            GS+  ++   A GA+ A++Y ++D    +K        D +LD +G     R  L  L 
Sbjct: 171 AGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARN-LRALA 229

Query: 260 RGGH 263
             G 
Sbjct: 230 PDGR 233

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  155 bits (394), Expect = 3e-45
 Identities = 83/241 (34%), Positives = 125/241 (51%), Gaps = 13/241 (5%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
            +A VLP+ G    L +   +E+P     EVLV+  A  +NP+D +    +G   +    
Sbjct: 1   MKAWVLPKPGAALQLTLEE-IEIPGPGAGEVLVKVHAAGLNPVDWK-VIAWGPPAWSY-- 56

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-GTYADYAVLSEDELTPKPVSV 147
           P + G D +G V AVGA V    VG  V  A H +  R G++A+Y V+    + P P S+
Sbjct: 57  PHVPGVDGAGVVVAVGAKVTGWKVGDRV--AYHASLARGGSFAEYTVVDARAVLPLPDSL 114

Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG 207
           +  +A+A+P A LTA++AL    R+  G+ +L+ GG G VG  AVQ +  +G  V  TC 
Sbjct: 115 SFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTCS 174

Query: 208 SKSIDRVLAAGAEQAVDYSSKDIELAIKG-----KFDAVLDTIGAPETERLGLNFLKRGG 262
            ++ + V + GA+  +DY+ +D+   IK        DAVLDT+G      L    L   G
Sbjct: 175 KRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAAL-APTLAFNG 233

Query: 263 H 263
           H
Sbjct: 234 H 234

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  150 bits (381), Expect = 3e-43
 Identities = 79/232 (34%), Positives = 113/232 (48%), Gaps = 10/232 (4%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           RAV   +FGGPEVL +   + VP     EVL+R  A+ +N  D   R G    I  P LP
Sbjct: 2   RAVRFHQFGGPEVLRIE-ELPVPAPGAGEVLIRVEAIGLNRADAMFRRG--AYIEPPPLP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFG-ALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
             LG + +G V AVGA V    VG  V           GTYA+YA++    +   P  ++
Sbjct: 59  ARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLS 118

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC-G 207
             +A+A+    LTA+ AL   A +  G  +L+     +VG AA+Q + A+G  V AT   
Sbjct: 119 FVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRT 178

Query: 208 SKSIDRVLAAGAEQAVDYSSKDIELAIK----GK-FDAVLDTIGAPETERLG 254
           S+  D +LA GA   +    +D+   +     GK  D V D +G P+  +L 
Sbjct: 179 SEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLA 230

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score =  147 bits (374), Expect = 4e-42
 Identities = 75/230 (32%), Positives = 106/230 (46%), Gaps = 15/230 (6%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           +AVV    GGPE L +      P   P EV +R  A  +N  D  M  G Y     +P L
Sbjct: 2   KAVVCKELGGPEDLVLEEVPPEPGA-PGEVRIRVEAAGVNFPDLLMIQGKYQ---VKPPL 57

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P + G +++G V AVG  V    VG  V         +G +A+  V+    + P P  ++
Sbjct: 58  PFVPGSEVAGVVEAVGEGVTGFKVGDRVVAL----TGQGGFAEEVVVPAAAVFPLPDGLS 113

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
             +A+A+P    TA+ AL   AR+  G+ +LVLG  G VG AAVQ + A G  V A   S
Sbjct: 114 FEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASS 173

Query: 209 -KSIDRVLAAGAEQAVDYSSKDIELAIKGKF-----DAVLDTIGAPETER 252
            + +    A GA+  +DY   D+   +K        D V D +G    E 
Sbjct: 174 EEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEA 223

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score =  142 bits (362), Expect = 2e-40
 Identities = 79/239 (33%), Positives = 114/239 (47%), Gaps = 16/239 (6%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +AV + + GGPEVLE   +V VP+  P EVLVR  A+ +N +DT  RSG    ++   LP
Sbjct: 1   KAVRIHKTGGPEVLEYE-DVPVPEPGPGEVLVRNTAIGVNFIDTYFRSG----LYPLPLP 55

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTH 149
            +LG + +G V AVG  V    VG  V  A       G YA+Y V+    L   P  ++ 
Sbjct: 56  FVLGVEGAGVVEAVGPGVTGFKVGDRVAYA----GPPGAYAEYRVVPASRLVKLPDGISD 111

Query: 150 ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK 209
             A+A+    LTA   L+    +  G  +LV    G VG    Q++ A G  V  T  S+
Sbjct: 112 ETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSE 171

Query: 210 S-IDRVLAAGAEQAVDYSSKDI-----ELAIKGKFDAVLDTIGAPETERLGLNFLKRGG 262
              +   AAGA+  ++Y  +D      E+      D V D +G  +T    L+ L+  G
Sbjct: 172 EKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGK-DTFEGSLDSLRPRG 229

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  140 bits (355), Expect = 3e-39
 Identities = 74/240 (30%), Positives = 105/240 (43%), Gaps = 13/240 (5%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           RAVVL  FGG + L+V     +P+    EV VR  A  +N  D   R G   S   P  P
Sbjct: 1   RAVVLTGFGGLDKLKVEKE-ALPEPSSGEVRVRVEACGLNFADLMARQGLYDS--APKPP 57

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTH 149
            + G + +G V AVG  V+   VG  V G        G YA+   +  D++ P P  ++ 
Sbjct: 58  FVPGFECAGTVEAVGEGVKDFKVGDRVMG----LTRFGGYAEVVNVPADQVFPLPDGMSF 113

Query: 150 ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQF-SVASGCHVSATCGS 208
            +A+A P   LTA+ AL     +  GQ +LV    G VG AA Q         V  T  +
Sbjct: 114 EEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTASA 173

Query: 209 KSIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHY 264
              + +   G    +DY ++D    +K       D VLD +G  +T +   + LK  G  
Sbjct: 174 SKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGEDTRK-SYDLLKPMGRL 232

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  139 bits (352), Expect = 7e-39
 Identities = 83/268 (30%), Positives = 123/268 (45%), Gaps = 12/268 (4%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           R VV+ R GGPEVL+V    ++P+    EV+V+  A  ++  D +MR G      +P LP
Sbjct: 2   REVVVTRRGGPEVLKVV-EADLPEPAAGEVVVKVEASGVSFADVQMRRG--LYPDQPPLP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTH 149
              G D+ G V A+G+ V    VG  V  AL      G  A+Y  L    L P P  V  
Sbjct: 59  FTPGYDLVGRVDALGSGVTGFEVGDRV-AALTRV---GGNAEYINLDAKYLVPVPEGVDA 114

Query: 150 ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK 209
           A+A  +    +TA++ L  AA++  GQR+L+ G  G VG A ++ ++ +G  V  T   +
Sbjct: 115 AEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTASER 174

Query: 210 SIDRVLAAGAEQAVDYSSKDIELA--IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
           +   +   GA   +DY +KD   A    G  D V D +G    E      L  GG  +  
Sbjct: 175 NHAALRELGAT-PIDYRTKDWLPAMLTPGGVDVVFDGVGGESYEE-SYAALAPGGT-LVC 231

Query: 268 HGETAALADHYGLALGLPIATTVLLKKR 295
           +G  ++L         L      L K +
Sbjct: 232 YGGNSSLLQGRRSLAALGSLLARLAKLK 259

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  138 bits (350), Expect = 2e-38
 Identities = 80/259 (30%), Positives = 115/259 (44%), Gaps = 31/259 (11%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           +A  L   GG + L++     VP+  P EVLVR  AVS+N  D  + +G Y         
Sbjct: 2   KAWRLSGGGGLDNLKLV-EEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYP---PPVKD 57

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTY-----------------AD 131
           PLI   D +GEV AVG  V    VG  V     P  + G                   A+
Sbjct: 58  PLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAE 117

Query: 132 YAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAA 191
           Y VL E+ L   P  ++  +A+ +P A LTAW AL     +  G  +LV G GG V   A
Sbjct: 118 YVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGG-VSLFA 176

Query: 192 VQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSK-DIELAIK----GK-FDAVLDT 244
           +QF+ A+G  V AT  S   ++R  A GA+  ++Y +  D    +     G+  D V++ 
Sbjct: 177 LQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEV 236

Query: 245 IGAPETERLGLNFLKRGGH 263
            G     +  +  +  GG 
Sbjct: 237 GGPGTLAQ-SIKAVAPGGV 254

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score =  135 bits (341), Expect = 4e-37
 Identities = 71/244 (29%), Positives = 120/244 (49%), Gaps = 31/244 (12%)

Query: 52  PDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS-L 110
              K NE++V+  A ++NP+D ++ + Y       +    LGRD SG +  VG++V S  
Sbjct: 24  NCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFK--VKEKGLGRDYSGVIVKVGSNVASEW 81

Query: 111 TVGQEVFGA-LHPTAVRGTYADYAVL----SEDELTPKPVSVTHADASAIPFAALTAWRA 165
            VG EV G   HP   +GT + Y ++     +  +T KP +++  +A+A P    TA++ 
Sbjct: 82  KVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQI 141

Query: 166 L-KCAARMSEGQRLLVLGGGGAVGFAAVQ-----FSVASGCHVSATCGSKSIDRVLAAGA 219
           L     ++    ++LVLGG  +VG  A+Q     +++ +   V  TC S+S +     GA
Sbjct: 142 LEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGT---VVGTCSSRSAELNKKLGA 198

Query: 220 EQAVDYSSKDIELAIK---------GKFDAVLDTIGA----PETERLGLNFLKRGGHYMT 266
           +  +DY +      +K         GKFD +LD +G     P    + L    + GHY+T
Sbjct: 199 DHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSI-LKPKSKNGHYVT 257

Query: 267 LHGE 270
           + G+
Sbjct: 258 IVGD 261

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score =  129 bits (327), Expect = 2e-35
 Identities = 73/247 (29%), Positives = 111/247 (44%), Gaps = 20/247 (8%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A+ +   GGPEVL +   V +P  K  EVL+R  A  +N  D   R+G       P  P
Sbjct: 2   KAIEITEPGGPEVLVLVE-VPLPVPKAGEVLIRVAAAGVNRPDLLQRAG-----KYPPPP 55

Query: 90  ---LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVS 146
               ILG +++GEV AVG  V    VG  V   +      G YA+Y  +   ++ P P  
Sbjct: 56  GASDILGLEVAGEVVAVGEGVSRWKVGDRVCALV----AGGGYAEYVAVPAGQVLPVPEG 111

Query: 147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC 206
           ++  +A+A+P    T W  L     +  G+ +L+ GG   +G  A+Q + A G  V  T 
Sbjct: 112 LSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTA 171

Query: 207 GSK-SIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKR 260
           GS        A GA+ A++Y  +D    +K        D +LD +G     R  +  L  
Sbjct: 172 GSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNR-NIKALAL 230

Query: 261 GGHYMTL 267
            G  + +
Sbjct: 231 DGRIVQI 237

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  128 bits (323), Expect = 1e-34
 Identities = 77/272 (28%), Positives = 109/272 (40%), Gaps = 37/272 (13%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPL- 87
           RAV+L   GG + L  R +V VP   P EVL+R  A  +N  D   R G Y   +     
Sbjct: 2   RAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATD 61

Query: 88  ---------------LPLILGRDISGEVAAVGASVRSLTVGQEV---FGALHPTAVR--- 126
                           P I G DI G V AVG  V +  +G+ V        P       
Sbjct: 62  STGAGEAGWWGGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD 121

Query: 127 ---------GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQR 177
                    G +A+Y V+  +   P    ++  + +  P +  TA   L+  A +  G+ 
Sbjct: 122 IDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENMLE-RAGVGAGET 180

Query: 178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAI--- 234
           +LV G  G VG A VQ +   G  V A  G+   + V A GA+  +   +  +  A    
Sbjct: 181 VLVTGASGGVGSALVQLAKRRGAIVIAVAGAAKEEAVRALGADTVILRDAPLLADAKALG 240

Query: 235 KGKFDAVLDTIGAPETERLGLNFLKRGGHYMT 266
               D V D +G P    L L  L+ GG Y+T
Sbjct: 241 GEPVDVVADVVGGPLFPDL-LRLLRPGGRYVT 271

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score =  118 bits (298), Expect = 3e-31
 Identities = 75/239 (31%), Positives = 125/239 (52%), Gaps = 14/239 (5%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A+V+ + GGPEVL++R  + +P+ KP  VL+R +A  +N  +   R G+  S+     P
Sbjct: 2   KAIVIEQPGGPEVLKLR-EIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSV---KFP 57

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVF---GALHPTAVRGTYADYAVLSEDELTPKPVS 146
            +LG +  GEV    A   + T GQ V    G +  T   G+YA+Y ++  +++      
Sbjct: 58  RVLGIEAVGEVEE--APGGTFTPGQRVATAMGGMGRT-FDGSYAEYTLVPNEQVYAIDSD 114

Query: 147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC 206
           ++ A+ +A+P    TAW +L  +  +  G  LL+ GG  +VG AA++ + A G  V+AT 
Sbjct: 115 LSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATT 174

Query: 207 GSKS-IDRVLAAGAEQA-VDYSSKDIEL-AIKGKFDAVLDTIGAPETERLGLNFLKRGG 262
            S      +   GA++  +D  +   +L A  G FD VL+ +G   T +  L  L+ GG
Sbjct: 175 RSPERAALLKELGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTA-TLKDSLRHLRPGG 232

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  118 bits (297), Expect = 8e-31
 Identities = 82/278 (29%), Positives = 120/278 (43%), Gaps = 36/278 (12%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A VL +FG P  +E    V VP+  P EVL++  A  +   D  +  G       P LP
Sbjct: 5   KAAVLKKFGQPLEIE---EVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWP---VPKLP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTA------------------------V 125
           LI G +I G V  VG  V  L VG  V       +                         
Sbjct: 59  LIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTT 118

Query: 126 RGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGG 185
            G YA+Y V+    +   P  +  A+A+ +  A +T +RALK  A +  G+ + V+G GG
Sbjct: 119 DGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALK-KANVKPGKWVAVVGAGG 177

Query: 186 AVGFAAVQFSVASGCHVSA-TCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDT 244
            +G  AVQ++ A G  V A T   + ++     GA+  ++ S  D   A+K   DA++DT
Sbjct: 178 -LGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAIIDT 236

Query: 245 IGAPETERLGLNFLKRGGHYMT--LHGETAALADHYGL 280
           +G    E   L  L+RGG  +   L G          L
Sbjct: 237 VGPATLEPS-LKALRRGGTLVLVGLPGGGPIPLLPAFL 273

Length = 339

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score =  117 bits (295), Expect = 1e-30
 Identities = 71/188 (37%), Positives = 104/188 (55%), Gaps = 15/188 (7%)

Query: 48  NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107
            +  P     ++LVR  AVS+NP+DT++R+G       P  P ILG D SG V AVG+ V
Sbjct: 22  ELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPV---PGQPKILGWDASGVVEAVGSEV 78

Query: 108 RSLTVGQEVFGALHPTAVR-GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL 166
               VG EV+ A   T  R G+ A+Y ++ E  +  KP S++ A+A+A+P  +LTAW AL
Sbjct: 79  TLFKVGDEVYYAGDIT--RPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEAL 136

Query: 167 -----KCAARMSEGQRLLVLGGGGAVGFAAVQFS-VASGCHVSATCGSK--SIDRVLAAG 218
                      +EG+ LL++GG G VG  A+Q +   +G  V AT  S+  SI  V   G
Sbjct: 137 FDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIAT-ASRPESIAWVKELG 195

Query: 219 AEQAVDYS 226
           A+  +++ 
Sbjct: 196 ADHVINHH 203

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score =  114 bits (287), Expect = 7e-30
 Identities = 64/217 (29%), Positives = 97/217 (44%), Gaps = 21/217 (9%)

Query: 57  NEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEV 116
           +EV V  +A  +N  D  +  G       P     LG + SG V  VG+ V  L VG  V
Sbjct: 1   DEVEVEVKAAGLNFRDVLVALG-----LLPGDETPLGLECSGIVTRVGSGVTGLKVGDRV 55

Query: 117 FGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQ 176
            G        G +A +  +    +   P S++  +A+ +P A LTA+ AL   AR+ +G+
Sbjct: 56  MGLAP-----GAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGE 110

Query: 177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVD--YSSKDIEL-- 232
            +L+    G VG AA+Q +   G  V AT GS+   R         VD  +SS+D+    
Sbjct: 111 SVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEE-KREFLRELGGPVDHIFSSRDLSFAD 169

Query: 233 ----AIKGK-FDAVLDTIGAPETERLGLNFLKRGGHY 264
               A  G+  D VL+++ + E  R     L   G +
Sbjct: 170 GILRATGGRGVDVVLNSL-SGELLRASWRCLAPFGRF 205

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score =  113 bits (284), Expect = 4e-29
 Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 35/268 (13%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A+V  + G  E L+V  +V+ P   P EVL+R +   +NP+D  + +       +P+ P
Sbjct: 2   KALVFEKSG-IENLKVE-DVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK---VKPM-P 55

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVF-----------------------GALHPTAVR 126
            I G + +G V  VG  V+ +  G  V                        G +      
Sbjct: 56  HIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSN 115

Query: 127 GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGA 186
           G YA+Y V+ E  L   P S++   A+++P AALTA+ ALK  A +  G+ ++V G  G 
Sbjct: 116 GGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALK-TAGLGPGETVVVFGASGN 174

Query: 187 VGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA-IKGKFDAVLDTI 245
            G  AVQ +   G  V A      +      GA++ VDY   + ++  I    D V++++
Sbjct: 175 TGIFAVQLAKMMGAEVIAVSRKDWLKE---FGADEVVDYDEVEEKVKEITKMADVVINSL 231

Query: 246 GAPETERLGLNFLKRGGHYMTLHGETAA 273
           G+   + L L+ L RGG  +T    T  
Sbjct: 232 GSSFWD-LSLSVLGRGGRLVTFGTLTGG 258

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  110 bits (278), Expect = 3e-28
 Identities = 70/257 (27%), Positives = 104/257 (40%), Gaps = 32/257 (12%)

Query: 36  RFGGPEV-LEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGR 94
           RF      L V   V VP+  P EVLV+ +A  +   D  +  G   ++ +   PL LG 
Sbjct: 5   RFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKL--PLTLGH 62

Query: 95  DISGEVAAVGASVRSLTVGQEV--FGALHPTAVR---------------------GTYAD 131
           +I+G V  VGA V +  VG  V     +   A                       G +A+
Sbjct: 63  EIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAE 122

Query: 132 YAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAA 191
           Y V+    L P P  V  A A+    A LT + A+  A  +  G+ +LV+G GG +G  A
Sbjct: 123 YIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGG-LGLNA 181

Query: 192 VQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVD----YSSKDIELAIKGKFDAVLDTIG 246
           VQ + A G  V A    +   +     GA++ ++             + G FD + D +G
Sbjct: 182 VQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFDVIFDFVG 241

Query: 247 APETERLGLNFLKRGGH 263
              T       +K GG 
Sbjct: 242 TQPTFEDAQKAVKPGGR 258

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  110 bits (276), Expect = 7e-28
 Identities = 71/257 (27%), Positives = 105/257 (40%), Gaps = 32/257 (12%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A +L +   P  +E    V  P+  P EVL++ +A  +   D     G+         P
Sbjct: 2   KAAILHKPNKPLQIE---EVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRG---KYP 55

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFG-----------------------ALHPTAVR 126
           LILG +I G V  VG  V     G  V                         A +   V 
Sbjct: 56  LILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVD 115

Query: 127 GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGA 186
           G +A+Y  + E  L   P +V+   A+       TA  ALK  A + +G  +LV G GG 
Sbjct: 116 GGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALK-RAGVKKGDTVLVTGAGGG 174

Query: 187 VGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTI 245
           VG  A+Q + A G  V A   S   +  +   GA+  +D S    ++   G  D V++ +
Sbjct: 175 VGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSKFSEDVKKLGGADVVIELV 234

Query: 246 GAPETERLGLNFLKRGG 262
           G+P  E   L  L +GG
Sbjct: 235 GSPTIEE-SLRSLNKGG 250

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score =  108 bits (272), Expect = 2e-27
 Identities = 87/268 (32%), Positives = 117/268 (43%), Gaps = 26/268 (9%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKP--NEVLVRTRAVSINPLDTRMRSGYGRSIFEPL 87
           RA+ L  FG PEVL      +VPD  P   +V +   A  ++ +DT++RSG+G   F P 
Sbjct: 2   RAIRLHEFGPPEVLVPE---DVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPE 58

Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSV 147
           LP + G +++G V AVG  V    +G+ V          G YA+ AV   D L P P  +
Sbjct: 59  LPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTGRAG--GGYAELAVADVDSLHPVPDGL 116

Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHV-SATC 206
               A A+     TA   L   A ++ G  +LV    G +G   VQ + A+G  V  A  
Sbjct: 117 DLEAAVAVVHDGRTALGLLD-LATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAG 175

Query: 207 GSKSIDRVLAAGAEQAVDYSSKDI-----ELAIKGKFDAVLDTIGAPETERLGLNFLKRG 261
           G      V A GA+ AVDY+  D      E    G    VLD +G     R  L  L  G
Sbjct: 176 GPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGA-IGRAALALLAPG 234

Query: 262 GHYMTLHGETAALADHYGLALGLPIATT 289
           G ++T           YG A G   A  
Sbjct: 235 GRFLT-----------YGWASGEWTALD 251

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score =  104 bits (261), Expect = 8e-26
 Identities = 72/230 (31%), Positives = 104/230 (45%), Gaps = 24/230 (10%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGY-----GRSIF 84
           RAV L  FGG +VL++      P  K N+VL++  A  +N  DT  R G      G S  
Sbjct: 3   RAVTLKGFGGVDVLKIG-ESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSS-- 59

Query: 85  EPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKP 144
                 ILG +++G V  VG+ V+    G  V   L      G YA+YAV  +  +   P
Sbjct: 60  -----EILGLEVAGYVEDVGSDVKRFKEGDRVMALLPG----GGYAEYAVAHKGHVMHIP 110

Query: 145 VSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VS 203
              T  +A+AIP A LTAW+ LK    + +GQ +L+  G   VG AA Q +   G   + 
Sbjct: 111 QGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATII 170

Query: 204 ATCGSKSIDRVLAAGAEQAVDY------SSKDIELAIKGKFDAVLDTIGA 247
            T   + +D      A   + Y      + K  +L  +   + VLD +G 
Sbjct: 171 TTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGG 220

Length = 334

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score =  103 bits (260), Expect = 8e-26
 Identities = 80/264 (30%), Positives = 116/264 (43%), Gaps = 29/264 (10%)

Query: 32  VVLPRFGGPE--VLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           VV  +FG P   VLE+   + +P   P EVLVR  A  INP D    SG YG     P L
Sbjct: 1   VVYTQFGEPLPLVLELVS-LPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSR---PPL 56

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P + G +  G V  VG+ V  L VGQ V     P    GT+ +Y V   D+L P P S++
Sbjct: 57  PAVPGNEGVGVVVEVGSGVSGLLVGQRVL----PLGGEGTWQEYVVAPADDLIPVPDSIS 112

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA-TCG 207
              A+ +    LTAW  L    ++  G  ++      AVG   +Q +   G         
Sbjct: 113 DEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRR 172

Query: 208 SKSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGG 262
            + ++ + A GA++ +D S +D+   +K           LD +G     RL  + L+ GG
Sbjct: 173 DEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARS-LRPGG 231

Query: 263 HYMTLHGETAALADHYGLALGLPI 286
             +           +YGL  G P+
Sbjct: 232 TLV-----------NYGLLSGEPV 244

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score =  103 bits (259), Expect = 9e-26
 Identities = 69/224 (30%), Positives = 103/224 (45%), Gaps = 12/224 (5%)

Query: 50  EVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS 109
           EV    P EV ++ RA S+N  D     G   ++  P  P   G + SG V AVG  V  
Sbjct: 1   EVAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTM--PPYPFTPGFEASGVVRAVGPHVTR 58

Query: 110 LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCA 169
           L VG EV      +   G +A    + ED++  KP S++  +A A+P   LT   A    
Sbjct: 59  LAVGDEVIAGTGESM--GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-R 115

Query: 170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAA-GAEQAVDYSSK 228
           A +++G+ +L+    G  G  AVQ +   G  + AT  S      L   G    ++Y  +
Sbjct: 116 AGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLKQLGVPHVINYVEE 175

Query: 229 DIELAIK----GK-FDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
           D E  I     G+  D V++T+ + E  + GLN L  GG Y+ +
Sbjct: 176 DFEEEIMRLTGGRGVDVVINTL-SGEAIQKGLNCLAPGGRYVEI 218

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =   99 bits (250), Expect = 4e-24
 Identities = 73/267 (27%), Positives = 112/267 (41%), Gaps = 38/267 (14%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A  L  +G P  LE   +V VP+  P +VLVR     +   D  +  G    I    LP
Sbjct: 2   KAARLYEYGKPLRLE---DVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGT--------------------- 128
             LG + +G V  VG+ V  L  G  V   +HP    GT                     
Sbjct: 59  FTLGHENAGWVEEVGSGVDGLKEGDPV--VVHPPWGCGTCRYCRRGEENYCENARFPGIG 116

Query: 129 ----YADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAAR-MSEGQRLLVLGG 183
               +A+Y ++    L   P  +   +A+ +  A LTA+ A+K A   +  G  ++V+G 
Sbjct: 117 TDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGV 176

Query: 184 GGAVGFAAVQFSVA-SGCHVSAT-CGSKSIDRVLAAGAEQAVDYSSKDIELAIK----GK 237
           GG +G  AVQ   A +   V A     +++      GA+  ++ S   +E   +      
Sbjct: 177 GG-LGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDDVVEEVRELTGGRG 235

Query: 238 FDAVLDTIGAPETERLGLNFLKRGGHY 264
            DAV+D +G+ ET  L    L +GG Y
Sbjct: 236 ADAVIDFVGSDETLALAAKLLAKGGRY 262

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 97.5 bits (244), Expect = 1e-23
 Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 5/118 (4%)

Query: 92  LGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHAD 151
           LG + +G V  VG  V  L VG  V G        G +A   V     + P P   +  +
Sbjct: 26  LGGECAGVVTRVGPGVTGLAVGDRVMGL-----APGAFATRVVTDARLVVPIPDGWSFEE 80

Query: 152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK 209
           A+ +P   LTA+ AL   AR+  G+ +L+    G VG AA+Q +   G  V AT GS 
Sbjct: 81  AATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLARHLGAEVFATAGSP 138

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 95.7 bits (239), Expect = 1e-22
 Identities = 75/264 (28%), Positives = 114/264 (43%), Gaps = 35/264 (13%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
            +A V+  FG         +V VP+  P EVLV+  A  +   D     G      +P L
Sbjct: 1   MKAAVVEEFGEKPYEVK--DVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPV--KPKL 56

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEV-----FGA---------LHPT----------A 124
           PLI G + +G V AVG  V  L VG  V     + A            T           
Sbjct: 57  PLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYT 116

Query: 125 VRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGG 184
           V GT+A+YA+     +TP P  ++   A+ +  A +T ++ALK  A +  G  +++ G G
Sbjct: 117 VDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALK-KAGLKPGDWVVISGAG 175

Query: 185 GAVGFAAVQFSVASGCHVSAT-CGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKF----- 238
           G +G   VQ++ A G  V A   G + ++     GA+  VD+   D   A+K        
Sbjct: 176 GGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGA 235

Query: 239 DAVLDTIGAPETERLGLNFLKRGG 262
            AV+ T  +       L++L+ GG
Sbjct: 236 HAVVVTAVSAAAYEQALDYLRPGG 259

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 94.2 bits (235), Expect = 3e-22
 Identities = 66/215 (30%), Positives = 92/215 (42%), Gaps = 36/215 (16%)

Query: 49  VEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLLPLILGRDISGEVAAVGASV 107
           V VP   P EVLV+ R V IN  D    +G Y   +     P   G +  GEV AVG  V
Sbjct: 23  VPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGV---KPPFDCGFEGVGEVVAVGEGV 79

Query: 108 RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPF--AALTAWRA 165
               VG  V      T   G +A+Y V+      P P          +P   + LTA  A
Sbjct: 80  TDFKVGDAV-----ATMSFGAFAEYQVVPARHAVPVP----ELKPEVLPLLVSGLTASIA 130

Query: 166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-------KSI--DRVLA 216
           L+    M  G+ +LV    G  G  AVQ +  +GCHV  TC S       KS+  DR   
Sbjct: 131 LEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRP-- 188

Query: 217 AGAEQAVDYSSKDIELAIKGKF----DAVLDTIGA 247
                 ++Y ++D+   +K ++    D V +++G 
Sbjct: 189 ------INYKTEDLGEVLKKEYPKGVDVVYESVGG 217

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score = 94.4 bits (235), Expect = 4e-22
 Identities = 61/187 (32%), Positives = 99/187 (52%), Gaps = 15/187 (8%)

Query: 49  VEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108
           +  P     ++LV  +A+S+NP+DT++R+   R   E   P ILG D +G V AVG  V 
Sbjct: 22  LPKPKPGGRDLLVEVKAISVNPVDTKVRA---RMAPEAGQPKILGWDAAGVVVAVGDEVT 78

Query: 109 SLTVGQEVF--GALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA- 165
               G EV+  G +      G+ A++ ++ E  +  KP S++ A+A+A+P  ++TAW   
Sbjct: 79  LFKPGDEVWYAGDI---DRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELL 135

Query: 166 ---LKCAARMSEGQR-LLVLGGGGAVGFAAVQFSVA-SGCHVSATCG-SKSIDRVLAAGA 219
              L     ++  +R LL++GG G VG   +Q +   +G  V AT    +S + VL  GA
Sbjct: 136 FDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGA 195

Query: 220 EQAVDYS 226
              +D+S
Sbjct: 196 HHVIDHS 202

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score = 92.8 bits (231), Expect = 1e-21
 Identities = 74/258 (28%), Positives = 105/258 (40%), Gaps = 33/258 (12%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A V+   GGP  LE    V VP+  P EVL++  A  +   D     G          P
Sbjct: 1   KAAVVHAAGGP--LEPE-EVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDW---GGSKYP 54

Query: 90  LILGRDISGEVAAVGASVRSLTVGQ---------------------EVFGA---LHPTAV 125
           L+ G +I GEV  VGA V    VG                      E             
Sbjct: 55  LVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTT 114

Query: 126 RGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGG 185
           +G YA+Y V   +     P  +  A A+ +  A +T + AL+ A     G+R+ VLG GG
Sbjct: 115 QGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRDAGPRP-GERVAVLGIGG 173

Query: 186 AVGFAAVQFSVASGCHVSA-TCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDT 244
            +G  AVQ++ A G    A T      +     GA++ VD  ++  E A  G  D +L T
Sbjct: 174 -LGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAELDEQAAAGGADVILVT 232

Query: 245 IGAPETERLGLNFLKRGG 262
           + +       L  L+RGG
Sbjct: 233 VVSGAAAEAALGGLRRGG 250

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score = 90.4 bits (225), Expect = 1e-20
 Identities = 68/267 (25%), Positives = 108/267 (40%), Gaps = 48/267 (17%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A+VL    GP  L    ++  P+  P EVLV+ +A  I   D     G G        P
Sbjct: 2   KALVLT---GPGDLRYE-DIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAYHP----P 53

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEV---------------------------FGALHP 122
           L+LG + SG V  VG+ V  L VG  V                            G+   
Sbjct: 54  LVLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRD 113

Query: 123 TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLG 182
               G +A+Y  +    L   P  V + +A+ I  AA  A  A++  A ++ G  ++V+G
Sbjct: 114 ----GAFAEYVSVPARNLIKIPDHVDYEEAAMIEPAA-VALHAVR-LAGITLGDTVVVIG 167

Query: 183 GGGAVGFAAVQFSVASGCH-VSATC-GSKSIDRVLAAGAEQAVDYSSKDIEL---AIKGK 237
            G  +G  A+Q+    G   V A     + +      GA+  ++   +D+E      +G+
Sbjct: 168 AG-TIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEEDVEKVRELTEGR 226

Query: 238 -FDAVLDTIGAPETERLGLNFLKRGGH 263
             D V++  G+P T    L   + GG 
Sbjct: 227 GADLVIEAAGSPATIEQALALARPGGK 253

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 89.4 bits (222), Expect = 2e-20
 Identities = 71/232 (30%), Positives = 108/232 (46%), Gaps = 16/232 (6%)

Query: 38  GGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLLPLILGRDI 96
           GGPEVL+        D   NEV V  +A+ IN +DT +RSG Y      P LP  LG + 
Sbjct: 11  GGPEVLQA-VEFTPADPAENEVQVENKAIGINYIDTYIRSGLYP----PPSLPSGLGTEA 65

Query: 97  SGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIP 156
           +G V+ VG+ V+ + VG  V  A       G Y+    +  D+    P +++   A+A  
Sbjct: 66  AGVVSKVGSGVKHIKVGDRVVYAQSAL---GAYSSVHNVPADKAAILPDAISFEQAAASF 122

Query: 157 FAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVL 215
              LT +  L+    +   ++ L     G VG  A Q++ A G  +  T GS +   R  
Sbjct: 123 LKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAK 182

Query: 216 AAGAEQAVDYSSKDI-----ELAIKGKFDAVLDTIGAPETERLGLNFLKRGG 262
            AGA Q ++Y  ++I     E+    K   V D++G  +T    L+ L+R G
Sbjct: 183 KAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGK-DTWEASLDCLQRRG 233

Length = 327

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score = 84.1 bits (209), Expect = 1e-18
 Identities = 64/266 (24%), Positives = 105/266 (39%), Gaps = 43/266 (16%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A+V     GP  LEV   V VP+  P+EVL++  A  I   D  +  G   +      P
Sbjct: 2   KALVYE---GPGELEVE-EVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAAP----P 53

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEV------------------------FGALHPTAV 125
           L+ G + +G V AVG+ V    VG  V                          A+  T  
Sbjct: 54  LVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVT-R 112

Query: 126 RGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGG 185
            G +A+Y V+   ++   P +++  +A+     +           +   G  +LV  G G
Sbjct: 113 NGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLDLLGIKP--GDSVLVF-GAG 169

Query: 186 AVGFAAVQFSVASGCH---VSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGK---FD 239
            +G    Q    +G     V+     K ++     GA + VD S +D E   +     FD
Sbjct: 170 PIGLLLAQLLKLNGASRVTVAEPNEEK-LELAKKLGATETVDPSREDPEAQKEDNPYGFD 228

Query: 240 AVLDTIGAPETERLGLNFLKRGGHYM 265
            V++  G P+T    + + +RGG  +
Sbjct: 229 VVIEATGVPKTLEQAIEYARRGGTVL 254

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score = 83.9 bits (208), Expect = 2e-18
 Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 31/256 (12%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +AV+LP F     +E    V  P    +EV+++     +   D     G+   +     P
Sbjct: 2   KAVILPGFKQGYRIE---EVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRM---KYP 55

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHP-----------------------TAVR 126
           +ILG ++ G V  VG +V+    G  V   L+                          + 
Sbjct: 56  VILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELD 115

Query: 127 GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGA 186
           G +A+YA +    L   P +V+   A  +P      +R L+  A + +G+ +LV G GG 
Sbjct: 116 GFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLR-RAGVKKGETVLVTGAGGG 174

Query: 187 VGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIG 246
           VG  A+Q + A G  V A   S+S  ++++  A+  +  S    E+   G  D V++T+G
Sbjct: 175 VGIHAIQVAKALGAKVIAVTSSESKAKIVSKYADYVIVGSKFSEEVKKIGGADIVIETVG 234

Query: 247 APETERLGLNFLKRGG 262
            P  E   L  L  GG
Sbjct: 235 TPTLEE-SLRSLNMGG 249

Length = 334

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 83.2 bits (206), Expect = 3e-18
 Identities = 66/178 (37%), Positives = 82/178 (46%), Gaps = 17/178 (9%)

Query: 30  RAVVLPRFGGPE-VLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPL 87
           RA V  +FG P  VLE+   V  P     EVLVRT    I+  D     G YG   ++P 
Sbjct: 2   RAAVHTQFGDPADVLEIG-EVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYG---YKPE 57

Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSV 147
           LP I G +  G V AVG  V+ L VGQ V  A     V GT+A+Y V   D L P P  +
Sbjct: 58  LPAIGGSEAVGVVDAVGEGVKGLQVGQRVAVA----PVHGTWAEYFVAPADGLVPLPDGI 113

Query: 148 ---THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHV 202
                A   A+P +AL     L     +  GQ L+    GGAVG      + A G +V
Sbjct: 114 SDEVAAQLIAMPLSALMLLDFLG----VKPGQWLIQNAAGGAVGKLVAMLAAARGINV 167

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 82.3 bits (204), Expect = 7e-18
 Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 6/177 (3%)

Query: 29  CRAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLD-TRMRSGYG-RSIFE 85
            +A+V    G P EVL++      P   PNEVLV+  A  INP D  +++  Y  +    
Sbjct: 1   AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTT 60

Query: 86  PLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPV 145
           P  P + G +  GEV  VG+ V+SL  G  V          GT+  +AV+  D+L   P 
Sbjct: 61  PEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLRPG---LGTWRTHAVVPADDLIKVPN 117

Query: 146 SVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHV 202
            V    A+ +     TA+R L+   ++  G  ++  G   AVG A +Q +   G   
Sbjct: 118 DVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKT 174

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score = 81.9 bits (203), Expect = 1e-17
 Identities = 74/268 (27%), Positives = 105/268 (39%), Gaps = 46/268 (17%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           RA V   FG P  LE+R  V  P+  P+ V+V   A  +   D     G+   +    LP
Sbjct: 2   RAAVYEEFGEP--LEIR-EVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDV---TLP 55

Query: 90  LILGRDISGEVAAVGASVRSLTVG---------------------------QEVFGALHP 122
            + G + +G V  VG  V    VG                           Q   G  HP
Sbjct: 56  HVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHP 115

Query: 123 TAVRGTYADY-AVLSEDE-LTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLV 180
               G++A+Y AV   D  L   P  V    A+ +     TA+RAL   AR+  G+ + V
Sbjct: 116 ----GSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAV 171

Query: 181 LGGGGAVGFAAVQFSVASGCHVSAT-CGSKSIDRVLAAGAEQAVDYSSKD-----IELAI 234
            G GG VG +AV  + A G  V A       ++     GA   V+ S  +     +    
Sbjct: 172 HGCGG-VGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLT 230

Query: 235 KGKFDAVLDTIGAPETERLGLNFLKRGG 262
            G     +D +G PET R  +  L++ G
Sbjct: 231 GGGAHVSVDALGIPETCRNSVASLRKRG 258

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score = 81.5 bits (202), Expect = 2e-17
 Identities = 63/258 (24%), Positives = 100/258 (38%), Gaps = 45/258 (17%)

Query: 48  NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGY----GRSIFE-----PLLPLILGRDISG 98
            ++ P     EVLV+  A  +   D  +  G     G            LPL+LG +I G
Sbjct: 17  EIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVG 76

Query: 99  EVAAVGASVRSLTVGQEVFGALHP-------------------------TAVRGTYADYA 133
           EV AVG     + VG +V   ++P                             G YA+Y 
Sbjct: 77  EVVAVGPDAADVKVGDKV--LVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYV 134

Query: 134 VLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQ 193
           ++        P  +  A A+ +  + LTA+ A+K    +   + ++++G GG +G  A+ 
Sbjct: 135 IVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGG-LGLMALA 193

Query: 194 FSVASGCHVSATCGSKS---IDRVLAAGAEQAVDYSS----KDIELAIKGKFDAVLDTIG 246
              A G   +          ++   AAGA+  V+ S     K I  A  G  DAV+D + 
Sbjct: 194 LLKALG-PANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAKRIIKAAGGGVDAVIDFVN 252

Query: 247 APETERLGLNFLKRGGHY 264
              T  L  + L +GG  
Sbjct: 253 NSATASLAFDILAKGGKL 270

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score = 80.7 bits (200), Expect = 2e-17
 Identities = 76/310 (24%), Positives = 120/310 (38%), Gaps = 71/310 (22%)

Query: 36  RFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRM-RSGYGRSIFEPLLPLILGR 94
              GP  + +   V VP+  P EVLV+ RA  I   D +  R G+     +   P ILG 
Sbjct: 5   VLHGPNDVRLE-EVPVPEPGPGEVLVKVRACGICGTDVKKIRGGH----TDLKPPRILGH 59

Query: 95  DISGEVAAVGASVRSLTVGQEVFGALH------PTAVRGTY-----------------AD 131
           +I+GE+  VG  V    VG  VF A H         +RG                   A+
Sbjct: 60  EIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAE 119

Query: 132 YAV-----LSEDELTPKPVSVTHADASAI-PFA-ALTAWRALKCAARMSEGQRLLVLGGG 184
           Y       +    +   P +V+  +A+ + P A  + A R     A +  G  +LV+ G 
Sbjct: 120 YVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCINAQR----KAGIKPGDTVLVI-GA 174

Query: 185 GAVGFAAVQFSVASGCHVSATC--GSKSIDRVLAAGAEQAVDYSSKDIELAIK----GK- 237
           G +G      + ASG             ++     GA+  +D + +D+   ++    G+ 
Sbjct: 175 GPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELTDGRG 234

Query: 238 FDAVLDTIGAPETERLGLNFLKRGG---------------------HY--MTLHGETAAL 274
            D V+   G+PE +   L  +++GG                     HY  +T+ G  AA 
Sbjct: 235 ADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAAS 294

Query: 275 ADHYGLALGL 284
            + Y  AL L
Sbjct: 295 PEDYKEALEL 304

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score = 79.9 bits (198), Expect = 6e-17
 Identities = 70/289 (24%), Positives = 101/289 (34%), Gaps = 70/289 (24%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           RA VL   G P  +E    VE+ D  P EVLVR  A  +   D  + +G         LP
Sbjct: 2   RAAVLHEVGKPLEIE---EVELDDPGPGEVLVRIAAAGLCHSDLHVVTGD----LPAPLP 54

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEV-----------------------------FGAL 120
            +LG + +G V  VG  V  +  G  V                              G L
Sbjct: 55  AVLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQL 114

Query: 121 HPTAVR--------------GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL 166
                R              GT+A+Y V+ E  +      +    A+ +     T   A+
Sbjct: 115 PDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAV 174

Query: 167 KCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSIDRV-------LAAG 218
              AR+  G  + V+G GG VG  A+Q +  +G   + A      +D V          G
Sbjct: 175 VNTARVRPGDTVAVIGCGG-VGLNAIQGARIAGASRIIA------VDPVPEKLELARRFG 227

Query: 219 AEQAVDYSSKDI-----ELAIKGKFDAVLDTIGAPETERLGLNFLKRGG 262
           A   V+ S  D      +L      D   + +G   T R  L   ++GG
Sbjct: 228 ATHTVNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGG 276

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 78.6 bits (194), Expect = 1e-16
 Identities = 63/206 (30%), Positives = 89/206 (43%), Gaps = 27/206 (13%)

Query: 50  EVPDLKP--NEVLVRTRAVSINPLDTR---MRSGYGRSIFEPLLPLILGRDISGEVAAVG 104
           EVPD +P  +E LVR  A+S+N  + +    R   G          + G D +G V    
Sbjct: 18  EVPDPQPAPHEALVRVAAISLNRGELKFAAERPD-GA---------VPGWDAAGVVERAA 67

Query: 105 ASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164
           A      VG  V G        G +A+   +    L   P  V+ A A+ +P A +TA R
Sbjct: 68  ADGSGPAVGARVVGLGAM----GAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALR 123

Query: 165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS--KSIDRVLAAGAEQA 222
           AL+    +  G+R+LV G  G VG  AVQ +  +G HV A  GS  ++        AE  
Sbjct: 124 ALRRGGPLL-GRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVV 182

Query: 223 VDYSSKDIELAIKGKFDAVLDTIGAP 248
           V  S            D V+D++G P
Sbjct: 183 VGGS-----ELSGAPVDLVVDSVGGP 203

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 78.6 bits (194), Expect = 2e-16
 Identities = 64/229 (27%), Positives = 96/229 (41%), Gaps = 46/229 (20%)

Query: 36  RFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSIN----------PLDT-RMRSGYGRSIF 84
           R+G P       +V VP+L P EVLV   A  +N          P+ T   R   GR   
Sbjct: 22  RYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRD-- 79

Query: 85  EPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR------------------ 126
           EP    I G D SG V AVG  V++  VG EV   +H +                     
Sbjct: 80  EPYH--IGGSDASGIVWAVGEGVKNWKVGDEV--VVHCSVWDGNDPERAGGDPMFDPSQR 135

Query: 127 --------GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL--KCAARMSEGQ 176
                   G++A +A++   +L PKP  ++  +A+A      TA+R L       +  G 
Sbjct: 136 IWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGD 195

Query: 177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVD 224
            +L+ G  G +G  A+Q + A+G +  A   S+   +   A GAE  ++
Sbjct: 196 NVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVIN 244

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 77.6 bits (192), Expect = 3e-16
 Identities = 72/278 (25%), Positives = 107/278 (38%), Gaps = 40/278 (14%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A+V+    G   L +R  + + DL   +VL+R    S+N  D    +G G        P
Sbjct: 2   KALVVEEQDGGVSLFLR-TLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVT--RNYP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEV------FGALHPTAVRGTYADYAVLSEDELTPK 143
              G D +G V +          G EV       G        G +A+Y  +  D + P 
Sbjct: 59  HTPGIDAAGTVVSSD--DPRFREGDEVLVTGYDLGMNTD----GGFAEYVRVPADWVVPL 112

Query: 144 PVSVTHADASAIPFAALTAWRALKCAARMSE-GQR-----LLVLGGGGAVGFAAVQFSVA 197
           P  ++  +A  +  A  TA  AL    R+ + GQ      +LV G  G VG  AV     
Sbjct: 113 PEGLSLREAMILGTAGFTA--AL-SVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAK 169

Query: 198 SGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELA---IKGKFDAVLDTIGAPETERL 253
            G  V A  G +   D + + GA + +D      E     +K ++   +DT+G       
Sbjct: 170 LGYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGDVLA-- 227

Query: 254 GLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVL 291
             N LK         G  A+     G A G  + TTVL
Sbjct: 228 --NLLK----QTKYGGVVAS----CGNAAGPELTTTVL 255

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score = 76.1 bits (188), Expect = 9e-16
 Identities = 66/282 (23%), Positives = 103/282 (36%), Gaps = 76/282 (26%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSI-----------NPLDTRMRSG 78
           +A+V      P  LEV  ++  P     EVLVR + V I           NP  +     
Sbjct: 2   KALVC---EKPGRLEVV-DIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFAS----- 52

Query: 79  YGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQ------------------------ 114
                     P ILG ++SGEV  VG  V  L VG                         
Sbjct: 53  ---------YPRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCC 103

Query: 115 ---EVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAI-PFA--ALTAWRALKC 168
              +V G +H     G +A+Y V+  D L   P  ++   A+ + P A  A    R    
Sbjct: 104 ENLQVLG-VH---RDGGFAEYIVVPADAL-LVPEGLSLDQAALVEPLAIGAHAVRR---- 154

Query: 169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSS 227
            A ++ G  +LV+ G G +G   +Q + A G  V         ++     GA+  ++   
Sbjct: 155 -AGVTAGDTVLVV-GAGPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGD 212

Query: 228 KDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHY 264
           +D+   ++        D V+D  G P +    +  +  GG  
Sbjct: 213 EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRV 254

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score = 75.2 bits (186), Expect = 2e-15
 Identities = 59/233 (25%), Positives = 90/233 (38%), Gaps = 36/233 (15%)

Query: 49  VEVPDLKPNEVLVRTRAVSINP-LDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107
           V +P+LK  EVLVRT  +S++P +   M      S      P+ LG  + G    VG  V
Sbjct: 25  VPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYS-----PPVQLGEPMRG--GGVGEVV 77

Query: 108 RS----LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFA----- 158
            S      VG  V G L        + +YAV+       K   +  +    +        
Sbjct: 78  ESRSPDFKVGDLVSGFLG-------WQEYAVVDGASGLRK---LDPSLGLPLSAYLGVLG 127

Query: 159 --ALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVL 215
              LTA+  L    +   G+ ++V    GAVG    Q +   G  V    GS      ++
Sbjct: 128 MTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLV 187

Query: 216 -AAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGH 263
              G + A++Y + D+  A+K       D   D +G    +   L  L +GG 
Sbjct: 188 EELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVGGEILD-AALTLLNKGGR 239

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score = 73.8 bits (182), Expect = 8e-15
 Identities = 70/296 (23%), Positives = 96/296 (32%), Gaps = 81/296 (27%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
            RA V    G P  +E    V++   +  EVLVR  A  +   D    SG      E   
Sbjct: 3   TRAAVAREAGKPLEIE---EVDLDPPRAGEVLVRITATGVCHTDAHTLSG---DDPEGF- 55

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHP----------------TAVR------ 126
           P +LG + +G V AVG  V S+  G  V     P                 A+R      
Sbjct: 56  PAVLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKG 115

Query: 127 ----------------------GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164
                                  T+A+Y V+ E  L           A  +     T   
Sbjct: 116 TMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIG 175

Query: 165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAA------- 217
           A+   A++  G  + V G GG VG AA+Q + A+G             R++A        
Sbjct: 176 AVVNTAKVEPGDTVAVFGLGG-VGLAAIQGAKAAGA-----------GRIIAVDINPEKL 223

Query: 218 ------GAEQAVDYSSKD-----IELAIKGKFDAVLDTIGAPETERLGLNFLKRGG 262
                 GA   V+    D     I     G  D   + +G  E  R  L    RGG
Sbjct: 224 ELAKKFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGG 279

Length = 366

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 73.0 bits (180), Expect = 1e-14
 Identities = 77/265 (29%), Positives = 102/265 (38%), Gaps = 48/265 (18%)

Query: 30  RAVVLPRFGGPEVLEVRP----NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFE 85
           +A+VL +   P  +E  P     V VP+  P EVL++  A  +   D  +  G    +  
Sbjct: 2   KAMVLEK---PGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEG---DLPP 55

Query: 86  PLLPLILGRDISGEVAAVGASVRSLTVGQEVFGA--LHPT-------------------- 123
           P LPLI G +I G V AVG  V   +VG  V G   L  T                    
Sbjct: 56  PKLPLIPGHEIVGRVEAVGPGVTRFSVGDRV-GVPWLGSTCGECRYCRSGRENLCDNARF 114

Query: 124 ---AVRGTYADYAVLSEDELTPKPVSVTHADASAIPF--AALTAWRALKCAARMSEGQRL 178
               V G YA+Y V  E    P P    + D  A P   A +  +RALK  A +  GQRL
Sbjct: 115 TGYTVDGGYAEYMVADERFAYPIPE--DYDDEEAAPLLCAGIIGYRALK-LAGLKPGQRL 171

Query: 179 LVLGGGGAVGFAAVQFSVASGCHVSA-TCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGK 237
             L G GA    A+Q +   G  V A T   +  +     GA+ A D             
Sbjct: 172 -GLYGFGASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGDSDDL-----PPEP 225

Query: 238 FDAVLDTIGAPETERLGLNFLKRGG 262
            DA +            L  +K+GG
Sbjct: 226 LDAAIIFAPVGALVPAALRAVKKGG 250

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score = 72.3 bits (178), Expect = 2e-14
 Identities = 47/193 (24%), Positives = 73/193 (37%), Gaps = 17/193 (8%)

Query: 49  VEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108
           V+VP+    +VL+RT  +S++P   R R     S   P+    LG  + G   A   +  
Sbjct: 32  VDVPEPGEGQVLLRTLYLSLDP-YMRGRMSDAPSYAPPVE---LGEVMVGGTVAKVVASN 87

Query: 109 S--LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADA--SAIPFAALTAWR 164
                 G  V G          + +YA+   + L     S     A    +    LTA+ 
Sbjct: 88  HPGFQPGDIVVGVS-------GWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYF 140

Query: 165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAA--GAEQA 222
            L    +   G+ ++V    GAVG    Q +   GC V    G       L    G +  
Sbjct: 141 GLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAG 200

Query: 223 VDYSSKDIELAIK 235
           +DY ++D   A+K
Sbjct: 201 IDYKAEDFAQALK 213

Length = 340

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 69.8 bits (172), Expect = 1e-13
 Identities = 65/253 (25%), Positives = 105/253 (41%), Gaps = 39/253 (15%)

Query: 48  NVEVPDLKPNEVLVRTRAVSINPLDTRM-RSGYGRSIFEPLLPLILGRDISGEVAAVGAS 106
             E   L P++V ++     +   D    R+ +G + +    PL+ G +I G V AVG+ 
Sbjct: 16  TFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKY----PLVPGHEIVGIVVAVGSK 71

Query: 107 VRSLTVGQEV-FGALH-----------------PTAV-------------RGTYADYAVL 135
           V    VG  V  G                    P  V             +G YAD+ V+
Sbjct: 72  VTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVV 131

Query: 136 SEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFS 195
            E  +   P  +  A A+ +  A +T +  LK    +  G+R+ V+G GG +G  AV+F+
Sbjct: 132 DERFVFKIPEGLDSAAAAPLLCAGITVYSPLK-RNGVGPGKRVGVVGIGG-LGHLAVKFA 189

Query: 196 VASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLG 254
            A G  V+A   S S  +  L  GA++ +     +      G  D ++DT+ A       
Sbjct: 190 KALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKKAAGSLDLIIDTVSASHDLDPY 249

Query: 255 LNFLKRGGHYMTL 267
           L+ LK GG  + +
Sbjct: 250 LSLLKPGGTLVLV 262

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score = 69.9 bits (172), Expect = 1e-13
 Identities = 51/213 (23%), Positives = 78/213 (36%), Gaps = 42/213 (19%)

Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEV------FGALHPTAVRGTY------------ 129
            P+ LG + SG V  VG+ V    VG  V               RG Y            
Sbjct: 64  APVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLG 123

Query: 130 ------ADYAVLSEDELTPKPVSVTHADASAI-PFAALTAWRALKCAARMSEGQRLLVLG 182
                 A+Y V+    +   P +V   +A+ + P A   AW A++ +     G   LVL 
Sbjct: 124 GGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLA--VAWHAVRRSG-FKPGDTALVL- 179

Query: 183 GGGAVGFAAVQFSVASGCH---VSATCGSKSIDRVLA--AGAEQAVDYSSKDIELAIK-- 235
           G G +G   +    A+G     VS    ++   R LA   GA   +D +  D+   ++  
Sbjct: 180 GAGPIGLLTILALKAAGASKIIVSEPSEAR---RELAEELGATIVLDPTEVDVVAEVRKL 236

Query: 236 ---GKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
              G  D   D  G   T    ++ L+  G  +
Sbjct: 237 TGGGGVDVSFDCAGVQATLDTAIDALRPRGTAV 269

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score = 68.2 bits (167), Expect = 6e-13
 Identities = 82/290 (28%), Positives = 122/290 (42%), Gaps = 67/290 (23%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A VL     P  +E    + VP  K  E+L+R  A  +   D  +  G     F P  P
Sbjct: 2   KAAVLKGPNPPLTIE---EIPVPRPKEGEILIRVAACGVCHSDLHVLKG--ELPFPP--P 54

Query: 90  LILGRDISGEVAAVGASVRS---LTVGQEVFGA--------------------------- 119
            +LG +ISGEV  VG +V +   L+VG  V G+                           
Sbjct: 55  FVLGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNR 114

Query: 120 --------------LHPTAVR----GTYADYAVLSEDELTPKPVSVTHADASAIPFAALT 161
                         L    V     G  A+YAV+    L P P S+ + +++ +  A  T
Sbjct: 115 LKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFT 174

Query: 162 AWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAA---- 217
           A+ ALK AA +  G+ + V+G GG VG +A+Q + A G   S        D  LA     
Sbjct: 175 AYGALKHAADVRPGETVAVIGVGG-VGSSAIQLAKAFG--ASPIIAVDVRDEKLAKAKEL 231

Query: 218 GAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGG 262
           GA   V+ + +D   AI+        D V++ +G PET +L L+ ++ GG
Sbjct: 232 GATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGG 281

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 62.7 bits (153), Expect = 1e-12
 Identities = 32/110 (29%), Positives = 40/110 (36%), Gaps = 26/110 (23%)

Query: 56  PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQE 115
           P EVLVR +A  I   D  +  G         LPLILG + +G V  VG  V  L VG  
Sbjct: 1   PGEVLVRVKAAGICGSDLHIYRGE---PPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDR 57

Query: 116 VF-----------------------GALHPTAVRGTYADYAVLSEDELTP 142
           V                        G      + G +A+Y V+    L P
Sbjct: 58  VVVYPLIPCGKCAACREGRENLCPNGKFLGVHLDGGFAEYVVVPARNLVP 107

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 66.7 bits (163), Expect = 2e-12
 Identities = 50/191 (26%), Positives = 74/191 (38%), Gaps = 46/191 (24%)

Query: 49  VEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPL--------------ILGR 94
           V VP+L P EVLV   A  +N       +    ++ EP+                 I+G 
Sbjct: 30  VPVPELGPGEVLVAVMAAGVN------YNNVWAALGEPVSTFAFLRKYGKLDLPFHIIGS 83

Query: 95  DISGEVAAVGASVRSLTVGQEV-FGALHPTAVR-----------------------GTYA 130
           D SG V  VG  V    VG EV    L                             G++A
Sbjct: 84  DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRDGDPMLSSEQRIWGYETNFGSFA 143

Query: 131 DYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL--KCAARMSEGQRLLVLGGGGAVG 188
           ++A++ + +L PKP  +T  +A+       TA+R L     A +  G  +L+ G  G +G
Sbjct: 144 EFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPAAVKPGDNVLIWGAAGGLG 203

Query: 189 FAAVQFSVASG 199
             A Q + A G
Sbjct: 204 SYATQLARAGG 214

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 66.1 bits (162), Expect = 2e-12
 Identities = 76/259 (29%), Positives = 110/259 (42%), Gaps = 31/259 (11%)

Query: 30  RAVVLPRFGGP-EVLEVR-PNVEVPDLKPNEVLVRTRAVSINPLD-TRMRSGYGRSIFEP 86
           +A++L  +G P EV E+  P  EVP+  P EVL++  A  INP D   ++  YG      
Sbjct: 2   KALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYG---STK 58

Query: 87  LLPLILGRDISGEVAAVGAS-VRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPV 145
            LP+  G + SG V A G   +    +G+ V          GTYA+YAV    +  P P 
Sbjct: 59  ALPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFL---AGSYGTYAEYAVADAQQCLPLPD 115

Query: 146 SVTHADASAIPFA-ALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA 204
            V+    ++  F   LTA   L+  AR    + ++      A+G   V+   A G  V  
Sbjct: 116 GVSFEQGAS-SFVNPLTALGMLE-TAREEGAKAVVHTAAASALGRMLVRLCKADGIKVIN 173

Query: 205 TCGSKS-IDRVLAAGAEQAVDYSSKD-----IELAIKGK----FDAVLDTIGAPETERLG 254
               K  +D +   GAE  ++ S  D      EL  K      FDAV    G   T ++ 
Sbjct: 174 IVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAV----GGGLTGQI- 228

Query: 255 LNFLKRGGH---YMTLHGE 270
           L  +  G     Y  L G+
Sbjct: 229 LLAMPYGSTLYVYGYLSGK 247

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 65.0 bits (159), Expect = 5e-12
 Identities = 65/249 (26%), Positives = 100/249 (40%), Gaps = 37/249 (14%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +AV +   GGP  L  R   +VP   P EVL++  A  +   D  ++ G    +  P +P
Sbjct: 2   KAVQVTEPGGPLELVER---DVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALH-----------------------PTAVR 126
              G ++ G + AVG  V    VG  V    H                           R
Sbjct: 59  ---GHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTR 115

Query: 127 -GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL-KCAARMSEGQRLLVLGGG 184
            G YA+Y +   + L   P  +  A+A+ +  A +T + AL    A+   G  + V G G
Sbjct: 116 DGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRNSGAK--PGDLVAVQGIG 173

Query: 185 GAVGFAAVQFSVASGCHVSA-TCGSKSIDRVLAAGAEQAVDYSSKDIELAIK--GKFDAV 241
           G +G  AVQ++   G    A + GS   D     GA   +D S +D+  A++  G    +
Sbjct: 174 G-LGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQELGGAKLI 232

Query: 242 LDTIGAPET 250
           L T    + 
Sbjct: 233 LATAPNAKA 241

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score = 64.4 bits (158), Expect = 9e-12
 Identities = 80/303 (26%), Positives = 106/303 (34%), Gaps = 89/303 (29%)

Query: 27  TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEP 86
               A V+   GGP VLE   +VE+ D +P+EVLVR  A  I   D  +R G        
Sbjct: 1   MKTTAAVVREPGGPFVLE---DVELDDPRPDEVLVRIVATGICHTDLVVRDG----GLPT 53

Query: 87  LLPLILGRDISGEVAAVGASVRSLTVGQEV-----------------------FGAL--- 120
            LP +LG + +G V AVG++V  L  G  V                       F  L   
Sbjct: 54  PLPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFS 113

Query: 121 -------------HPTAVRGTY------ADYAVLSEDELTPKPVSVTHADASAIPFAAL- 160
                          T V G +      A YAV+ E  +          D      A L 
Sbjct: 114 GRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVD-----KDVPLELLAPLG 168

Query: 161 --------TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI 211
                        LK       G  + V  G GAVG AAV  +  +GC  + A      +
Sbjct: 169 CGIQTGAGAVLNVLKPRP----GSSIAVF-GAGAVGLAAVMAAKIAGCTTIIA------V 217

Query: 212 DRV-----LAA--GAEQAVDYSSKDIELAIKGKF----DAVLDTIGAPETERLGLNFLKR 260
           D V     LA   GA   ++   +D+  AI+       D  LDT G P      ++ L  
Sbjct: 218 DIVDSRLELAKELGATHVINPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAP 277

Query: 261 GGH 263
            G 
Sbjct: 278 RGT 280

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score = 63.9 bits (156), Expect = 1e-11
 Identities = 64/272 (23%), Positives = 98/272 (36%), Gaps = 47/272 (17%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A V+  + G   + +      P   P +VL+R  A  I   D  +  G     F P   
Sbjct: 2   KAAVV--YVGGGDVRLE-EPPPPIPGPGDVLIRVTATGICGSDLHIYRG--GEPFVPPGD 56

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEV----------------------------FGALH 121
           +ILG +  GEV  VG  VR   VG  V                              A  
Sbjct: 57  IILGHEFVGEVVEVGV-VRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGL 115

Query: 122 PTAVRGTYADYAVLSEDELTPKPV-SVTHADASAIPFAALTAWRALKCAARMSEGQRLLV 180
              + G +A+Y  +  D    K    +    A+     A TA+      A +  G  ++V
Sbjct: 116 GGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLA-TAYHGHAERAAVRPGGTVVV 174

Query: 181 LGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRV-LAA---GAEQAVDYSSKDIELAIK- 235
           +G G  +G  A+  +   G  V      +S +R+ LA    GA+  V+ S  D    I  
Sbjct: 175 VGAG-PIGLLAIALAKLLGASV-VIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILE 232

Query: 236 ----GKFDAVLDTIGAPETERLGLNFLKRGGH 263
                  D V++ +G+P      L  L+ GG 
Sbjct: 233 LTGGRGADVVIEAVGSPPALDQALEALRPGGT 264

Length = 350

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score = 61.2 bits (149), Expect = 1e-10
 Identities = 60/265 (22%), Positives = 94/265 (35%), Gaps = 49/265 (18%)

Query: 35  PRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRM-RSGYGRSIFEPLLPLILG 93
             F G   +E+R    VP   P EVL+R +A  +   D      G+    ++ ++P   G
Sbjct: 4   AVFPGDRTVELRE-FPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIP---G 59

Query: 94  RDISGEVAAVGASVRSLTVGQEV----------------------------FGALHPTAV 125
            + +G V AVG  V    VG  V                            +G       
Sbjct: 60  HEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRD--- 116

Query: 126 RGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGG 185
            G +A+Y ++ E  L P P  ++ AD + +     TA+ AL+     S    +LV+ G G
Sbjct: 117 -GGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHALRRVGV-SGRDTVLVV-GAG 173

Query: 186 AVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDY-------SSKDIELAIKGK- 237
            VG  A+  + A G       G       L        D+         ++I     G  
Sbjct: 174 PVGLGALMLARALGAEDVI--GVDPSPERLELAKALGADFVINSGQDDVQEIRELTSGAG 231

Query: 238 FDAVLDTIGAPETERLGLNFLKRGG 262
            D  ++  G     RL L  ++  G
Sbjct: 232 ADVAIECSGNTAARRLALEAVRPWG 256

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score = 59.0 bits (144), Expect = 6e-10
 Identities = 67/277 (24%), Positives = 98/277 (35%), Gaps = 57/277 (20%)

Query: 31  AVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLD----TRMRSGYGRSIFEP 86
           A VL    GP  L +     +P+  P EVLVR RAV I   D       R G     F  
Sbjct: 1   AAVLH---GPGDLRLE-ERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIG----DFVV 52

Query: 87  LLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHP------------------------ 122
             P++LG + +G V AVG+ V  L VG  V  A+ P                        
Sbjct: 53  KEPMVLGHESAGTVVAVGSGVTHLKVGDRV--AIEPGVPCRTCEFCKSGRYNLCPDMRFA 110

Query: 123 -TA-VRGTYADYAVLSEDELTPKPVSVTHADASAI-PFA-ALTAWRALKCAARMSEGQRL 178
            T  V GT   Y     D     P +V+  + + + P +  + A R     A +  G  +
Sbjct: 111 ATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGVHACR----RAGVRPGDTV 166

Query: 179 LVLGGGGAVGFAAVQFSVASGCHVSATCG--------SKSI--DRVLAAGAEQAVDYSSK 228
           LV  G G +G      + A G                +K +     +    E   + + K
Sbjct: 167 LVF-GAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEK 225

Query: 229 DIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
             EL      D V++  GA    +  +   + GG  +
Sbjct: 226 IAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVV 262

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 58.5 bits (142), Expect = 9e-10
 Identities = 65/257 (25%), Positives = 99/257 (38%), Gaps = 52/257 (20%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG--------YGR 81
           RA V     GP V+   P+   P+  P +VLV+  A  I   D    +          G 
Sbjct: 2   RAAVFR--DGPLVVRDVPD---PEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGP 56

Query: 82  SIFEPLLPLILGRDISGEVAAVGASVRS-LTVGQEV--------------FGALHPTAVR 126
           S+ +    ++LG +  GEV   G      L VG  V                 L P A  
Sbjct: 57  SLMDLGADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAP- 115

Query: 127 GTYADYAVLSEDELTPKPVSVTHADASAI-PFAALTAWRALKCAARMSEGQRLLVLGGGG 185
           G YA+Y +LSE  L   P  ++  DA+   P A      A++  AR++ G+  LV+ G G
Sbjct: 116 GGYAEYMLLSEALLLRVPDGLSMEDAALTEPLA--VGLHAVR-RARLTPGEVALVI-GCG 171

Query: 186 AVGFA--------------AVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIE 231
            +G A              A  FS      ++   G+   D V+   A+      + ++ 
Sbjct: 172 PIGLAVIAALKARGVGPIVASDFS-PERRALALAMGA---DIVVDPAADSPFAAWAAELA 227

Query: 232 LAIKGKFDAVLDTIGAP 248
            A   K   + + +GAP
Sbjct: 228 RAGGPKPAVIFECVGAP 244

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 57.6 bits (140), Expect = 2e-09
 Identities = 77/278 (27%), Positives = 112/278 (40%), Gaps = 41/278 (14%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A+V+ +  G    +V   +++ DL   +VL++    S+N  D    +G G  +     P
Sbjct: 1   KALVVEKEDGKVSAQVE-TLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRS--YP 57

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEV------FGALHPTAVRGTYADYAVLSEDELTPK 143
           +I G D +G V  V +       G EV       G  H     G Y+ YA +  D L P 
Sbjct: 58  MIPGIDAAGTV--VSSEDPRFREGDEVIVTGYGLGVSHD----GGYSQYARVPADWLVPL 111

Query: 144 PVSVTHADASAIPFAALTAWRALKCAARMSE-GQR-----LLVLGGGGAVGFAAVQFSVA 197
           P  ++  +A A+  A  TA  AL     +   G       +LV G  G VG  AV     
Sbjct: 112 PEGLSLREAMALGTAGFTA--AL-SVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSK 168

Query: 198 SGCHVSATCGSKSI-DRVLAAGAEQAV---DYSSKDIELAIKGKFDAVLDTIGAPETERL 253
            G  V A+ G     D +   GA + +   D S     L  K ++   +DT+G      +
Sbjct: 169 LGYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLE-KERWAGAVDTVGGHTLANV 227

Query: 254 GLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVL 291
            L  LK GG          A     GLA G  + TTVL
Sbjct: 228 -LAQLKYGG--------AVAA---CGLAGGPDLPTTVL 253

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score = 56.9 bits (138), Expect = 3e-09
 Identities = 73/284 (25%), Positives = 104/284 (36%), Gaps = 54/284 (19%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
            RA VL   G P  LE+R  V +PDL+P  VLVR R   +   D    +  GR    P L
Sbjct: 1   ARAAVLTGPGKP--LEIR-EVPLPDLEPGAVLVRVRLAGVCGSDVHTVA--GRRPRVP-L 54

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQE-------VFG------------ALHPT------ 123
           P+ILG +  G V A+G  V +   G+         +                PT      
Sbjct: 55  PIILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRK 114

Query: 124 -----------AVRGTYADYAVLSED-ELTPKPVSVTHADASAIPFAALTAWRALKCAAR 171
                       + G YA++  L     +   P +V    A+    A  T   AL  A  
Sbjct: 115 KYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGP 174

Query: 172 MSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKS-IDRVLAAGAEQAVDYSSKD 229
           +  G  ++V G G  +G  AV  +  +G   V    GS   ++     GA+  +D     
Sbjct: 175 VGAGDTVVVQGAGP-LGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELP 233

Query: 230 IELAIK--------GKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
                            D V++  G P     GL  L+RGG Y+
Sbjct: 234 DPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYV 277

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 55.0 bits (133), Expect = 8e-09
 Identities = 49/178 (27%), Positives = 68/178 (38%), Gaps = 14/178 (7%)

Query: 87  LLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVS 146
            LPL  G    G V  VG+ V     G  VF         G +A+  V+  + L P P  
Sbjct: 19  PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-------GPHAERVVVPANLLVPLPDG 71

Query: 147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSAT 205
           +    A+    AA TA   ++  A    G+R+ V+ G G VG  A Q + A+G   V   
Sbjct: 72  LPPERAALTALAA-TALNGVRD-AEPRLGERVAVV-GLGLVGLLAAQLAKAAGAREVVGV 128

Query: 206 CGSKSIDRVLAAGAEQAVDYSSKDIELAI-KGKFDAVLDTIGAPETERLGLNFLKRGG 262
                  R   A A    D  + D    I     D V++  G+P      L  L+  G
Sbjct: 129 --DPDAARRELAEALGPADPVAADTADEIGGRGADVVIEASGSPSALETALRLLRDRG 184

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 54.9 bits (132), Expect = 1e-08
 Identities = 63/254 (24%), Positives = 98/254 (38%), Gaps = 44/254 (17%)

Query: 49  VEVPDLKPNEVLVRTRAVSINPLDTRMRS--GYGRSIFEPLLPLILGRDISGEVAAVGAS 106
           V VP+  P EVL++  A SI   D  + +   + +S  +P  P ++G +++GEV  +G  
Sbjct: 16  VPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKP--PQVVGHEVAGEVVGIGPG 73

Query: 107 VRSLTVGQEVFGALHPTAVR-----------------------GTYADYAVLSEDELTPK 143
           V  + VG  V    H    +                       G +A+YAV+    +   
Sbjct: 74  VEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKN 133

Query: 144 PVSVTHADASAI-PF--AALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC 200
           P S+    A+   P   A  T        A    G+ +LV  G G +G  A+  + ASG 
Sbjct: 134 PKSIPPEYATIQEPLGNAVHTV------LAGPISGKSVLVT-GAGPIGLMAIAVAKASGA 186

Query: 201 HVSATCGSKSIDRVLA--AGAEQAVDYSSKDI-----ELAIKGKFDAVLDTIGAPETERL 253
           +             LA   GA   V+   +D+     +L      D  L+  GAP+    
Sbjct: 187 YPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMSGAPKALEQ 246

Query: 254 GLNFLKRGGHYMTL 267
           GL  +  GG    L
Sbjct: 247 GLQAVTPGGRVSLL 260

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 53.7 bits (130), Expect = 3e-08
 Identities = 65/253 (25%), Positives = 103/253 (40%), Gaps = 52/253 (20%)

Query: 49  VEVPDLKPNEVLVRTRAVSINPLDTRMRS--GYGRSIFEPLLPLILGRDISGEVAAVGAS 106
           V VP+  PN+VL++ +  +I   D  + +   + +       P+++G +  GEV  VG+ 
Sbjct: 18  VPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPV--PMVVGHEFVGEVVEVGSE 75

Query: 107 VRSLTVGQEVFGALHPTAVR-----------------------GTYADYAVLSEDELTPK 143
           V    VG  V G  H                            G +A+Y V+    +   
Sbjct: 76  VTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKI 135

Query: 144 PVSVTHADASAI--PF--AALTAWRALKCAARMSEGQRLLVLGGG--GAVGFAAVQFSVA 197
           P  +   D +AI  PF  A  TA       +    G+ +L+ G G  G +  A  +   A
Sbjct: 136 PDDIP-DDLAAIFDPFGNAVHTAL------SFDLVGEDVLITGAGPIGIMAAAVAKHVGA 188

Query: 198 SGCHVSATCGSKSIDRV-LAA--GAEQAVDYSSKDI-----ELAIKGKFDAVLDTIGAPE 249
              HV  T    +  R+ LA   GA +AV+ + +D+     EL +   FD  L+  GAP 
Sbjct: 189 R--HVVIT--DVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGFDVGLEMSGAPS 244

Query: 250 TERLGLNFLKRGG 262
             R  L+ +  GG
Sbjct: 245 AFRQMLDNMNHGG 257

Length = 341

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score = 53.5 bits (129), Expect = 4e-08
 Identities = 70/292 (23%), Positives = 102/292 (34%), Gaps = 60/292 (20%)

Query: 30  RAVVLPRFGGPEVL-EVRP----NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
           RA VL   G P    + RP     VE+    P EVLV+  A  +   D  + +G      
Sbjct: 2   RAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVING---DRP 58

Query: 85  EPLLPLILGRDISGEVAAVGASVRSLTVGQEVF--------------------------- 117
            PL P+ LG + +G V  VG  V  L VG  V                            
Sbjct: 59  RPL-PMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAA 117

Query: 118 ---GALHPTAVR--------------GTYADYAVLSEDELTPKPVSVTHADASAIPFAAL 160
              G L     R                +A+YAV+S   +      V    A+    A L
Sbjct: 118 NGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVL 177

Query: 161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH--VSATCGSKSIDRVLAAG 218
           T   A+   A +  GQ + V+G GG VG +A+  +VA+G    V+       +      G
Sbjct: 178 TGVGAVVNTAGVRPGQSVAVVGLGG-VGLSALLGAVAAGASQVVAVDLNEDKLALARELG 236

Query: 219 AEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMT 266
           A   V+    +    ++    G  D   +  G+           +RGG  +T
Sbjct: 237 ATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVT 288

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score = 53.6 bits (129), Expect = 4e-08
 Identities = 65/289 (22%), Positives = 102/289 (35%), Gaps = 66/289 (22%)

Query: 29  CRAVVLPRFGGP---EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFE 85
           C+A VL   G P   E +EV P       K  EV ++  A  +   D  +  G       
Sbjct: 1   CKAAVLWEKGKPLSIEEIEVAPP------KAGEVRIKVVATGVCHTDLHVIDG----KLP 50

Query: 86  PLLPLILGRDISGEVAAVGASVRSLTVGQEV---FGA------------------LHPTA 124
             LP+ILG + +G V ++G  V +L  G +V   FG                      T 
Sbjct: 51  TPLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTN 110

Query: 125 VRG-----------------------TYADYAVLSEDELTPKPVSVTHADASAIPFAALT 161
            RG                       T+A+Y V+SE  L              I     T
Sbjct: 111 GRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFST 170

Query: 162 AWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH--VSATCGSKSIDRVLAAGA 219
            + A    A+++ G    V G GG VG + +    A+G    ++        ++    GA
Sbjct: 171 GYGAAVNTAKVTPGSTCAVFGLGG-VGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGA 229

Query: 220 EQAVD--YSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGG 262
            + ++     K I   +     G  D   + IG+ +T +  L+  + GG
Sbjct: 230 TECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG 278

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 53.0 bits (128), Expect = 6e-08
 Identities = 69/261 (26%), Positives = 104/261 (39%), Gaps = 65/261 (24%)

Query: 49  VEVPDLKPNEVLVRTRAVSINPLD-----------TRMRSGYGRSIFEPLLPLILGRDIS 97
              P+  P EV VR  A  I   D            R+R            P++LG ++S
Sbjct: 14  RPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLRE-----------PMVLGHEVS 62

Query: 98  GEVAAVGASVRSLTVGQEVFGALHPTA------------------------------VRG 127
           G V AVG  V  L  GQ V  A++P+                               V+G
Sbjct: 63  GVVEAVGPGVTGLAPGQRV--AVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQG 120

Query: 128 TYADYAVLSEDELTPKPVSVTHADAS-AIPFAALTAWRALKCAARMSEGQRLLVLGGG-- 184
            + +Y V+   +  P P  ++   A+ A P A   A  A+  A  +  G+R+LV G G  
Sbjct: 121 GFREYLVVDASQCVPLPDGLSLRRAALAEPLA--VALHAVNRAGDL-AGKRVLVTGAGPI 177

Query: 185 GAVGFAAVQFSVASGCHVSAT-CGSKSIDRVLAAGAEQAVDYSSKDIEL--AIKGKFDAV 241
           GA+  AA + + A+   + AT      +    A GA++ V+ +   +    A KG FD V
Sbjct: 178 GALVVAAARRAGAA--EIVATDLADAPLAVARAMGADETVNLARDPLAAYAADKGDFDVV 235

Query: 242 LDTIGAPETERLGLNFLKRGG 262
            +  GAP      L  ++ GG
Sbjct: 236 FEASGAPAALASALRVVRPGG 256

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score = 52.2 bits (126), Expect = 1e-07
 Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 4/70 (5%)

Query: 49  VEVPDLKPNEVLVRTRAVSINPLDTRMR--SGYGRSIFEPLLPLILGRDISGEVAAVGAS 106
           V VP   P EVL++  A SI   D  +     + +S  +P  PLI G + +GEV  VG  
Sbjct: 18  VPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKP--PLIFGHEFAGEVVEVGEG 75

Query: 107 VRSLTVGQEV 116
           V  + VG  V
Sbjct: 76  VTRVKVGDYV 85

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 58/228 (25%), Positives = 91/228 (39%), Gaps = 22/228 (9%)

Query: 48  NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107
           N+ + DL   +VL+R    S+N  D       G+ +     P I G D++G V       
Sbjct: 19  NLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKR--YPFIPGIDLAGTVVESNDP- 75

Query: 108 RSLTVGQEV------FGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALT 161
                G EV       G  H     G Y++YA +  + + P P  +T  +A  +  A  T
Sbjct: 76  -RFKPGDEVIVTSYDLGVSH----HGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFT 130

Query: 162 AW---RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAA 217
           A      L+      E   +LV G  G VG  AV      G  V A+ G     D +   
Sbjct: 131 AALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKL 190

Query: 218 GAEQAV---DYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGG 262
           GA++ +   +   + I+   K ++   +D +G      L L+ L+ GG
Sbjct: 191 GAKEVIPREELQEESIKPLEKQRWAGAVDPVGGKTLAYL-LSTLQYGG 237

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 48.1 bits (115), Expect = 3e-07
 Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 7/84 (8%)

Query: 186 AVGFAAVQFSVASG-CHVSATCGSKS-IDRVLAAGAEQAVDYSSKDI-----ELAIKGKF 238
            VG AAVQ + A G   V A   S+  ++     GA+  ++Y  +D      EL      
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDEDFVERVRELTGGRGV 60

Query: 239 DAVLDTIGAPETERLGLNFLKRGG 262
           D V+D +GAP T    L  L+ GG
Sbjct: 61  DVVIDCVGAPATLEQALELLRPGG 84

Length = 131

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score = 49.6 bits (119), Expect = 6e-07
 Identities = 67/278 (24%), Positives = 103/278 (37%), Gaps = 62/278 (22%)

Query: 30  RAVVL--PRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPL 87
           +A+V   P  G  E+ EV      P+  P EVL++  A  I   D  +  G         
Sbjct: 2   KALVKTGPGPGNVELREV----PEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDP---VE 54

Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEV----------------------------FGA 119
            P++LG + SG +  VG  V    VG  V                             G 
Sbjct: 55  TPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIG- 113

Query: 120 LHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALT-----AWRALKCAARMSE 174
              T   G +A+Y ++ E+ L   P      +  ++  AALT     A  A+   + +  
Sbjct: 114 ---TQADGGFAEYVLVPEESLHELP------ENLSLEAAALTEPLAVAVHAVAERSGIRP 164

Query: 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAA---GAEQAVDYSSKDI- 230
           G  ++V  G G +G  A Q +   G  V      K   R+  A   GA+ AV+   +D+ 
Sbjct: 165 GDTVVVF-GPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGAD-AVNGGEEDLA 222

Query: 231 ----ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHY 264
               E+      D V++  GA       L  L++GG  
Sbjct: 223 ELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRI 260

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases

 Score = 49.1 bits (118), Expect = 1e-06
 Identities = 63/233 (27%), Positives = 94/233 (40%), Gaps = 29/233 (12%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A+VL +  G    E+R  ++  DL   +V V     ++N  D    +G G  +     P
Sbjct: 2   KALVLEKDDGGTSAELRE-LDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRT--FP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVF------GALHPTAVRGTYADYAVLSEDELTPK 143
           L+ G D++G V    +S      G  V       G  H     G YA  A +  D L P 
Sbjct: 59  LVPGIDLAGTVVE--SSSPRFKPGDRVVLTGWGVGERHW----GGYAQRARVKADWLVPL 112

Query: 144 PVSVTHADASAIPFAALTAW---RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC 200
           P  ++   A AI  A  TA     AL+          +LV G  G VG  AV      G 
Sbjct: 113 PEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY 172

Query: 201 HVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGK------FDAVLDTIG 246
            V A+ G     D + + GA + +D +    EL+  G+      +   +DT+G
Sbjct: 173 EVVASTGRPEEADYLRSLGASEIIDRA----ELSEPGRPLQKERWAGAVDTVG 221

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 58/249 (23%), Positives = 85/249 (34%), Gaps = 37/249 (14%)

Query: 36  RFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRD 95
              G   L V  ++  P+  P E LVR     I   D  +  GY         P + G +
Sbjct: 5   VLDGGLDLRVE-DLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP------FPGVPGHE 57

Query: 96  ISGEVAAVGAS--VRSLTVGQEVFGALH-PTAVRGTY------------------ADYAV 134
             G V     +  V    VG+            RG Y                  A+Y  
Sbjct: 58  FVGIVEEGPEAELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLT 117

Query: 135 LSEDELTPKPVSVTHADASAI-PFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQ 193
           L  + L   P  V    A    P AA  A   L+    ++ G ++ VL G G +G    Q
Sbjct: 118 LPLENLHVVPDLVPDEQAVFAEPLAA--ALEILE-QVPITPGDKVAVL-GDGKLGLLIAQ 173

Query: 194 FSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERL 253
               +G  V      +  ++ LA      V+    D   +  G FD V++  G+P    L
Sbjct: 174 VLALTGPDV--VLVGRHSEK-LALARRLGVETVLPDEAESEGGGFDVVVEATGSPSGLEL 230

Query: 254 GLNFLK-RG 261
            L  ++ RG
Sbjct: 231 ALRLVRPRG 239

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score = 48.3 bits (115), Expect = 2e-06
 Identities = 64/266 (24%), Positives = 97/266 (36%), Gaps = 51/266 (19%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           R V+    G P  LE    + VPD  P EV+V  +A  +   D   R G     F    P
Sbjct: 3   RGVIARSKGAPVELE---TIVVPDPGPGEVIVDIQACGVCHTDLHYREGGINDEF----P 55

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEV-------------------------FGA----- 119
            +LG + +G V AVG  V  +  G  V                           A     
Sbjct: 56  FLLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMT 115

Query: 120 ------LHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMS 173
                 L P    G +A+  ++   + T    +   A A  +    +    A      + 
Sbjct: 116 LTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVK 175

Query: 174 EGQRLLVLGGGGAVGFAAVQFSVASGCH--VSATCGSKSIDRVLAAGAEQAVDYSSKDIE 231
            G  + V+G GG VG AA+  +  +G    ++     + ++     GA   V+ S  D  
Sbjct: 176 RGDSVAVIGCGG-VGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPV 234

Query: 232 LAIK---GKF--DAVLDTIGAPETER 252
            AI+   G F  D V+D +G PET +
Sbjct: 235 EAIRALTGGFGADVVIDAVGRPETYK 260

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 63/268 (23%), Positives = 91/268 (33%), Gaps = 58/268 (21%)

Query: 39  GPEVLEVRPNVEVPDLKPNE---VLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRD 95
           GP  + +    EVPD K       +VR  A SI   D  +  G    +      +ILG +
Sbjct: 8   GPGKIGLE---EVPDPKIQGPHDAIVRVTATSICGSDLHIYRG---GVPGAKHGMILGHE 61

Query: 96  ISGEVAAVGASVRSLTVGQEV------------------------------FGA----LH 121
             GEV  VG+ V+ L  G  V                               G       
Sbjct: 62  FVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQ 121

Query: 122 PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVL 181
              VR  YAD        L   P  +   DA  +     T +   +  A +  G  + V+
Sbjct: 122 AEYVRVPYADMN------LAKIPDGLPDEDALMLSDILPTGFHGAEL-AGIKPGSTVAVI 174

Query: 182 GGGGAVGFAAVQFSVASGCHVSATCGSKS--IDRVLAAGAEQAVDYSSKDIELAIK---- 235
            G G VG  AV  +   G        S    +D    AGA   ++  + DI   I     
Sbjct: 175 -GAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILELTG 233

Query: 236 GK-FDAVLDTIGAPETERLGLNFLKRGG 262
           G+  D V++ +G  ET    +  ++ GG
Sbjct: 234 GRGVDCVIEAVGFEETFEQAVKVVRPGG 261

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 44.8 bits (106), Expect = 3e-05
 Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 11/81 (13%)

Query: 43  LEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRM----RSGYGRSIFEPLL---PLILGRD 95
           L V  +V VP+LKP+E+L+R +A  I   D  +    + GY   I  P L   P+++G +
Sbjct: 39  LRVE-DVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGY---ILYPGLTEFPVVIGHE 94

Query: 96  ISGEVAAVGASVRSLTVGQEV 116
            SG V   G +V++   G  V
Sbjct: 95  FSGVVEKTGKNVKNFEKGDPV 115

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 56/231 (24%), Positives = 80/231 (34%), Gaps = 36/231 (15%)

Query: 49  VEVPDLKPNEVLVRTRAVSINPLDTRMRSGY-GRSIF-EPLLPLILGRDISGEVAAVGAS 106
              P   P +VLVR     +   D  + +   GR  F  P  P   G +  G V A+G  
Sbjct: 12  HPRPTPGPGQVLVRVEGCGVCGSD--LPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPG 69

Query: 107 VRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL 166
           VR L VG  V G        G +A+Y +   D   P P     +      F        L
Sbjct: 70  VRGLAVGDRVAG-----LSGGAFAEYDLADADHAVPLP-----SLLDGQAFPG----EPL 115

Query: 167 KCA------ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAA--- 217
            CA        +  G+ + V+ G G +G   +Q + A+G               LA    
Sbjct: 116 GCALNVFRRGWIRAGKTVAVI-GAGFIGLLFLQLAAAAGARRVI--AIDRRPARLALARE 172

Query: 218 -GAEQAVDYSSKDI-----ELAIKGKFDAVLDTIGAPETERLGLNFLKRGG 262
            GA + V   S+ I     EL      D V++ +G      L    +   G
Sbjct: 173 LGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERG 223

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 11/89 (12%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGY-GRSIFEPL 87
           +AVV   +GGP  + V  +V  P ++ P + +VR    +I   D  M   Y GR+  EP 
Sbjct: 2   KAVV---YGGPGNVAVE-DVPDPKIEHPTDAIVRITTTAICGSDLHM---YRGRTGAEP- 53

Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEV 116
             L+LG +  GEV  VG++V SL VG  V
Sbjct: 54  -GLVLGHEAMGEVEEVGSAVESLKVGDRV 81

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 7/89 (7%)

Query: 28  SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPL 87
            C+A V    G P V+E    +EV   K NEV ++  A S+   D     G+  ++F   
Sbjct: 2   KCKAAVAWEAGKPLVIE---EIEVAPPKANEVRIKMLATSVCHTDILAIEGFKATLF--- 55

Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEV 116
            P+ILG + +G V +VG  V +L  G +V
Sbjct: 56  -PVILGHEGAGIVESVGEGVTNLKPGDKV 83

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

 Score = 41.2 bits (97), Expect = 4e-04
 Identities = 48/199 (24%), Positives = 80/199 (40%), Gaps = 35/199 (17%)

Query: 30  RAVVLPRF--GGPEV--LEVRPN---VEVPDLKPNEVLVRTRAVSINP-LDTRMRSGYGR 81
           + V+L  +  G P+   LE+R     ++VP     +VLV+   +S +P +  RM+     
Sbjct: 4   KQVILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS 63

Query: 82  SIFEPLLPLILGRDISG-EVAAVGASVR-SLTVGQEVFGALHPTAVRGTYADYAVLSEDE 139
               P  P   G  I+G  VA V  S      VG  V+G          + +Y+++    
Sbjct: 64  LYLPPFKP---GEVITGYGVAKVVDSGNPDFKVGDLVWGFTG-------WEEYSLI---- 109

Query: 140 LTPKPVSVTHADASAIPF---------AALTAWRALKCAARMSEGQRLLVLGGGGAVGFA 190
             P+   +   D + +P            LTA+       +  +G+ + V    GAVG  
Sbjct: 110 --PRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQL 167

Query: 191 AVQFSVASGCHVSATCGSK 209
             Q +   GC+V  + GS 
Sbjct: 168 VGQLAKLKGCYVVGSAGSD 186

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338

>gnl|CDD|176253 cd08293, PTGR2, Prostaglandin reductase

 Score = 41.2 bits (97), Expect = 4e-04
 Identities = 53/216 (24%), Positives = 86/216 (39%), Gaps = 24/216 (11%)

Query: 49  VEVPDLKPN-EVLVRTRAVSINP-LDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS 106
             +PD     +VLVRT  +S++P +  RM    G     P   L    D  G      + 
Sbjct: 28  CTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPW-QLSQVLDGGGVGVVEESK 86

Query: 107 VRSLTVGQEVFGALHPTAVRGTYADYAVLSEDEL---TPKPV--SVTHADASAIPFAALT 161
            +   VG  V      T+    +  YAVL    L    P+ V   +++    A+    LT
Sbjct: 87  HQKFAVGDIV------TSFNWPWQTYAVLDGSSLEKVDPQLVDGHLSYF-LGAVGLPGLT 139

Query: 162 AWRALKCAARMSEG--QRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSIDRVLAA- 217
           A   ++    ++ G  Q ++V G  GA G  A Q     GC  V   CGS    ++L + 
Sbjct: 140 ALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSE 199

Query: 218 -GAEQAVDYSSKDIELAIK----GKFDAVLDTIGAP 248
            G + A++Y + ++   ++       D   D +G  
Sbjct: 200 LGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGE 235

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 345

>gnl|CDD|222256 pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenase

 Score = 38.9 bits (91), Expect = 6e-04
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)

Query: 218 GAEQAVDYSSKDIELAIKGK-FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALAD 276
           GA++ +DY+++D E A  G+  D VLDT+G     R  L  LK GG  +++ G    L+ 
Sbjct: 2   GADEVIDYTTEDFEEATAGEGVDVVLDTVGGETLLRALLA-LKPGGRLVSIGGPDLLLSV 60

Query: 277 H 277
            
Sbjct: 61  A 61

Length = 129

>gnl|CDD|225056 COG2145, ThiM, Hydroxyethylthiazole kinase, sugar kinase family [Coenzyme metabolism]

 Score = 39.9 bits (94), Expect = 7e-04
 Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 102 AVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALT 161
            VGA+        E+   + P A+RG  ++ A L+ +    K V      A AI  A   
Sbjct: 94  GVGATKFRTKFALELLAEVKPAAIRGNASEIAALAGEAGGGKGVDAGDGAADAIEAAKKA 153

Query: 162 AWRALKCAARM-------SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
           A +       +       S+G R++V+  G  +    +     +GC + A   +
Sbjct: 154 A-QKYGTVVVVTGEVDYISDGTRVVVIHNGSPL-LGKI---TGTGCLLGAVVAA 202

Length = 265

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 40.0 bits (94), Expect = 8e-04
 Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 8/94 (8%)

Query: 177 RLLVLGGGGAVGFAAVQFSVASGCHVS-ATCGSKSIDRVLAAGAEQ-AVD-YSSKDIELA 233
           ++L++GG   +G A V+  +A+G  V+    G    D  L  G E    D      +E  
Sbjct: 2   KILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKPD--LPEGVEHIVGDRNDRDALEEL 59

Query: 234 IKGK-FDAVLDTIG--APETERLGLNFLKRGGHY 264
           + G+ FD V+DTI     + ER    F  R   Y
Sbjct: 60  LGGEDFDVVVDTIAYTPRQVERALDAFKGRVKQY 93

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score = 39.9 bits (94), Expect = 0.001
 Identities = 66/281 (23%), Positives = 104/281 (37%), Gaps = 70/281 (24%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLK---PNEVLVRTRAVSINPLDTRMRSGYGRSIFEP 86
           +AVV   F GP  + V    EVP  +   P + +V+  A +I   D  +  G+  S    
Sbjct: 2   KAVV---FKGPGDVRV---EEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPS---- 51

Query: 87  LLPLILGRDISGEVAAVGASVRSLTVGQEV---------------------------FGA 119
               +LG +  GEV  VG  VR+L VG  V                           FG 
Sbjct: 52  TPGFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGY 111

Query: 120 LHPTAVRGTYADY-AV-LSEDELTPKPVSVTHADASAIPFAAL--TAWRALKCAARMSEG 175
                + G  A+Y  V  ++  L   P  ++  D +A+    +  T +   K  A++  G
Sbjct: 112 AGSPNLDGAQAEYVRVPFADGTLLKLPDGLS--DEAALLLGDILPTGYFGAK-RAQVRPG 168

Query: 176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS---IDRV---LAAGAEQ-AVDYSSK 228
             + V+G G  VG  AV          +   G+     +D V   L   A   A   + +
Sbjct: 169 DTVAVIGCG-PVGLCAVL--------SAQVLGAARVFAVDPVPERLERAAALGAEPINFE 219

Query: 229 DIELAIKGK-------FDAVLDTIGAPETERLGLNFLKRGG 262
           D E   + +        D VL+ +G      L  + ++ GG
Sbjct: 220 DAEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGG 260

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 64/262 (24%), Positives = 95/262 (36%), Gaps = 64/262 (24%)

Query: 48  NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP----LILGRDISGEVAAV 103
              +P   PN+ +VR  AV+    D          ++         +ILG +  G V  V
Sbjct: 16  EKPIPVCGPNDAIVRPTAVAPCTSDVHT-------VWGGAPGERHGMILGHEAVGVVEEV 68

Query: 104 GASVRSLTVGQEVF-GALHP-------------------------TAVRGTYADYAVLSE 137
           G+ V+    G  V   A+ P                             G +A+Y  +++
Sbjct: 69  GSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVND 128

Query: 138 DE--LTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFS 195
            +  L P P  +T   A  +P    T +   +  A +  G  + V  G G VG  AV   
Sbjct: 129 ADANLAPLPDGLTDEQAVMLPDMMSTGFHGAE-LANIKLGDTVAVF-GIGPVGLMAV--- 183

Query: 196 VASGCHVSATCGSKSI-------DRVLAA---GAEQAVDYSSKDIELAIK----GK-FDA 240
             +G  +    G+  I       +RV  A   GA   VDY + D+   I     GK  DA
Sbjct: 184 --AGARL---RGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLTGGKGVDA 238

Query: 241 VLDTIGAPETERLGLNFLKRGG 262
           V+   G  +T    L  LK GG
Sbjct: 239 VIIAGGGQDTFEQALKVLKPGG 260

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 11/88 (12%)

Query: 39  GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTR----MRSGYGRSIFEPLLPLILGR 94
           G   L+++P  ++P L P++V VR +AV I   D      MR       F    P+++G 
Sbjct: 25  GVNTLKIQP-FKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCAD----FVVKEPMVIGH 79

Query: 95  DISGEVAAVGASVRSLTVGQEVFGALHP 122
           + +G +  VG+ V+ L VG  V  AL P
Sbjct: 80  ECAGIIEEVGSEVKHLVVGDRV--ALEP 105

Length = 364

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 54/222 (24%), Positives = 81/222 (36%), Gaps = 67/222 (30%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A VL   G P  +E    +E+ D K  EVLV+  A  +   D  + +G    +  P  P
Sbjct: 3   KAAVLWGPGQPWEVE---EIELDDPKAGEVLVKLVASGLCHSDEHLVTG---DLPMPRYP 56

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVF-----------------------GA------- 119
           ++ G + +G V  VG  V  +  G  V                        GA       
Sbjct: 57  ILGGHEGAGVVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDLGAALLTGSQ 116

Query: 120 --------------LHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPF--AAL--- 160
                         +    + GT+++Y V+ E        SV   D   IP   A L   
Sbjct: 117 ISDGTYRFHADGQDVGQMCLLGTFSEYTVVPEA-------SVVKIDDD-IPLDKACLVGC 168

Query: 161 ---TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASG 199
              T W +    A +  G  ++V+G GG VG  AVQ +  +G
Sbjct: 169 GVPTGWGSAVNIADVRPGDTVVVMGIGG-VGINAVQGAAVAG 209

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 7/88 (7%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           C+A VL     P  +E    +EV   K +EV ++  A  I   D  + SG          
Sbjct: 8   CKAAVLWEPKKPFSIE---EIEVAPPKAHEVRIKIVATGICRSDDHVVSG----KLVTPF 60

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEV 116
           P+ILG + +G V +VG  V ++  G +V
Sbjct: 61  PVILGHEAAGIVESVGEGVTTVKPGDKV 88

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	307
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	99.98
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	99.98
COG2130	340	Putative NADP-dependent oxidoreductases [General f	99.98
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	99.98
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	99.98
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	99.98
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	99.98
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	99.98
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	99.97
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	99.97
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	99.97
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	99.97
PRK13771	334	putative alcohol dehydrogenase; Provisional	99.97
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	99.97
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	99.97
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	99.97
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	99.97
cd08252	336	AL_MDR Arginate lyase and other MDR family members	99.97
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	99.97
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	99.97
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	99.97
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	99.97
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	99.97
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.97
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.97
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.97
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	99.97
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	99.97
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	99.97
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	99.97
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	99.97
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	99.97
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	99.97
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	99.97
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	99.97
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	99.97
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	99.97
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	99.97
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	99.97
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	99.97
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.97
PLN02702	364	L-idonate 5-dehydrogenase	99.96
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	99.96
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	99.96
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	99.96
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.96
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.96
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	99.95
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.95
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.94
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.94
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.89
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.85
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.74
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.42
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.0
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	98.6
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	98.34
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.21
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.19
PRK08324	681	short chain dehydrogenase; Validated	98.18
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	98.04
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	97.99
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.92
PLN02494	477	adenosylhomocysteinase	97.89
PRK12742	237	oxidoreductase; Provisional	97.84
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	97.83
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.82
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.76
PRK05993	277	short chain dehydrogenase; Provisional	97.74
PRK08339	263	short chain dehydrogenase; Provisional	97.74
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	97.73
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	97.72
PRK05693	274	short chain dehydrogenase; Provisional	97.72
PLN03209	576	translocon at the inner envelope of chloroplast su	97.71
PRK05872	296	short chain dehydrogenase; Provisional	97.71
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	97.71
PRK07985	294	oxidoreductase; Provisional	97.7
PRK06128	300	oxidoreductase; Provisional	97.7
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	97.69
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.69
PRK08265	261	short chain dehydrogenase; Provisional	97.66
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	97.66
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	97.65
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	97.65
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.65
PRK06182	273	short chain dehydrogenase; Validated	97.64
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.58
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.58
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.57
PRK06398	258	aldose dehydrogenase; Validated	97.56
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.55
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	97.55
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	97.55
PRK07109	334	short chain dehydrogenase; Provisional	97.52
KOG0725	270	consensus Reductases with broad range of substrate	97.52
PRK07062	265	short chain dehydrogenase; Provisional	97.52
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	97.51
PRK07063	260	short chain dehydrogenase; Provisional	97.49
PRK08589	272	short chain dehydrogenase; Validated	97.49
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.49
PRK06139	330	short chain dehydrogenase; Provisional	97.47
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	97.47
PRK07576	264	short chain dehydrogenase; Provisional	97.47
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.46
PRK06179	270	short chain dehydrogenase; Provisional	97.45
PRK06484	520	short chain dehydrogenase; Validated	97.45
PRK07832	272	short chain dehydrogenase; Provisional	97.44
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	97.43
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	97.43
PRK07831	262	short chain dehydrogenase; Provisional	97.42
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.42
PRK07825	273	short chain dehydrogenase; Provisional	97.41
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	97.4
PRK06483	236	dihydromonapterin reductase; Provisional	97.4
PRK07814	263	short chain dehydrogenase; Provisional	97.4
PRK08340	259	glucose-1-dehydrogenase; Provisional	97.4
PRK07806	248	short chain dehydrogenase; Provisional	97.38
PRK07523	255	gluconate 5-dehydrogenase; Provisional	97.37
PRK06484	520	short chain dehydrogenase; Validated	97.36
PRK06500	249	short chain dehydrogenase; Provisional	97.35
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.33
PRK12939	250	short chain dehydrogenase; Provisional	97.33
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	97.31
PRK07856	252	short chain dehydrogenase; Provisional	97.31
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	97.31
PRK08085	254	gluconate 5-dehydrogenase; Provisional	97.3
PRK07578	199	short chain dehydrogenase; Provisional	97.3
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	97.29
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	97.29
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	97.28
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.28
PRK05717	255	oxidoreductase; Validated	97.27
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.27
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	97.26
PRK06523	260	short chain dehydrogenase; Provisional	97.25
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	97.25
PRK07904	253	short chain dehydrogenase; Provisional	97.25
PRK05866	293	short chain dehydrogenase; Provisional	97.24
PRK07326	237	short chain dehydrogenase; Provisional	97.23
PRK05876	275	short chain dehydrogenase; Provisional	97.22
PLN02253	280	xanthoxin dehydrogenase	97.21
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.21
PRK07577	234	short chain dehydrogenase; Provisional	97.21
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	97.2
PRK09072	263	short chain dehydrogenase; Provisional	97.19
PRK09242	257	tropinone reductase; Provisional	97.18
PRK07677	252	short chain dehydrogenase; Provisional	97.18
PRK07478	254	short chain dehydrogenase; Provisional	97.17
PRK05884	223	short chain dehydrogenase; Provisional	97.17
PRK12747	252	short chain dehydrogenase; Provisional	97.16
PRK07791	286	short chain dehydrogenase; Provisional	97.16
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	97.16
PRK06701	290	short chain dehydrogenase; Provisional	97.15
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.15
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	97.14
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	97.14
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	97.13
PRK06114	254	short chain dehydrogenase; Provisional	97.13
PRK12743	256	oxidoreductase; Provisional	97.13
PRK08277	278	D-mannonate oxidoreductase; Provisional	97.13
PRK08267	260	short chain dehydrogenase; Provisional	97.12
PRK10538	248	malonic semialdehyde reductase; Provisional	97.12
PRK07060	245	short chain dehydrogenase; Provisional	97.12
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.11
PRK08628	258	short chain dehydrogenase; Provisional	97.1
PRK06180	277	short chain dehydrogenase; Provisional	97.09
PRK06841	255	short chain dehydrogenase; Provisional	97.09
PRK12828	239	short chain dehydrogenase; Provisional	97.08
PRK12938	246	acetyacetyl-CoA reductase; Provisional	97.08
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.07
PRK08643	256	acetoin reductase; Validated	97.07
PRK08263	275	short chain dehydrogenase; Provisional	97.06
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.04
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	97.04
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	97.01
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	97.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.0
PRK07890	258	short chain dehydrogenase; Provisional	96.99
PRK09291	257	short chain dehydrogenase; Provisional	96.99
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	96.98
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	96.98
PRK06172	253	short chain dehydrogenase; Provisional	96.97
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.97
PRK12937	245	short chain dehydrogenase; Provisional	96.97
PRK06949	258	short chain dehydrogenase; Provisional	96.97
PRK06124	256	gluconate 5-dehydrogenase; Provisional	96.96
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.96
PRK08936	261	glucose-1-dehydrogenase; Provisional	96.95
PRK07454	241	short chain dehydrogenase; Provisional	96.93
PRK08303	305	short chain dehydrogenase; Provisional	96.93
PRK07023	243	short chain dehydrogenase; Provisional	96.93
PRK05867	253	short chain dehydrogenase; Provisional	96.92
PRK07067	257	sorbitol dehydrogenase; Provisional	96.92
PRK06125	259	short chain dehydrogenase; Provisional	96.92
PRK06196	315	oxidoreductase; Provisional	96.91
PRK06198	260	short chain dehydrogenase; Provisional	96.91
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	96.9
PRK12829	264	short chain dehydrogenase; Provisional	96.9
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	96.89
PRK08278	273	short chain dehydrogenase; Provisional	96.89
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	96.89
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	96.87
PRK06181	263	short chain dehydrogenase; Provisional	96.87
PRK08862	227	short chain dehydrogenase; Provisional	96.84
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	96.84
PRK05855	582	short chain dehydrogenase; Validated	96.82
PRK07097	265	gluconate 5-dehydrogenase; Provisional	96.82
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	96.82
PRK06101	240	short chain dehydrogenase; Provisional	96.81
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	96.8
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	96.8
PRK08177	225	short chain dehydrogenase; Provisional	96.8
PRK06138	252	short chain dehydrogenase; Provisional	96.79
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.79
PRK12367	245	short chain dehydrogenase; Provisional	96.79
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	96.78
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	96.76
PRK07024	257	short chain dehydrogenase; Provisional	96.76
PRK07035	252	short chain dehydrogenase; Provisional	96.75
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.71
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.7
PRK05875	276	short chain dehydrogenase; Provisional	96.68
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.68
PRK06914	280	short chain dehydrogenase; Provisional	96.66
PRK06194	287	hypothetical protein; Provisional	96.66
PRK05650	270	short chain dehydrogenase; Provisional	96.66
PRK09186	256	flagellin modification protein A; Provisional	96.65
COG2910	211	Putative NADH-flavin reductase [General function p	96.63
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.61
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.61
PRK12744	257	short chain dehydrogenase; Provisional	96.6
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.59
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	96.58
PRK05599	246	hypothetical protein; Provisional	96.58
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	96.57
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.56
PRK08703	239	short chain dehydrogenase; Provisional	96.56
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.56
PRK07074	257	short chain dehydrogenase; Provisional	96.55
PLN02780	320	ketoreductase/ oxidoreductase	96.55
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	96.55
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.53
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	96.52
PRK08017	256	oxidoreductase; Provisional	96.51
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	96.51
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.51
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.51
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.47
PRK06482	276	short chain dehydrogenase; Provisional	96.46
CHL00194	317	ycf39 Ycf39; Provisional	96.41
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	96.4
PRK08213	259	gluconate 5-dehydrogenase; Provisional	96.4
PRK08264	238	short chain dehydrogenase; Validated	96.4
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	96.4
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	96.39
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	96.38
PRK06123	248	short chain dehydrogenase; Provisional	96.38
PRK06057	255	short chain dehydrogenase; Provisional	96.38
PRK12935	247	acetoacetyl-CoA reductase; Provisional	96.37
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	96.34
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	96.32
PRK07775	274	short chain dehydrogenase; Provisional	96.31
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	96.31
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.27
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.25
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.24
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.24
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	96.23
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.22
TIGR02415	254	23BDH acetoin reductases. One member of this famil	96.21
PRK06940	275	short chain dehydrogenase; Provisional	96.18
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	96.16
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.14
PRK12824	245	acetoacetyl-CoA reductase; Provisional	96.13
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.12
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.1
PRK12827	249	short chain dehydrogenase; Provisional	96.1
PRK09134	258	short chain dehydrogenase; Provisional	96.1
PRK07201	657	short chain dehydrogenase; Provisional	96.09
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	96.08
PRK07069	251	short chain dehydrogenase; Validated	96.08
PRK09135	249	pteridine reductase; Provisional	96.05
PRK07102	243	short chain dehydrogenase; Provisional	96.03
PRK12746	254	short chain dehydrogenase; Provisional	96.03
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	96.03
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	96.03
PRK07041	230	short chain dehydrogenase; Provisional	95.98
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	95.97
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.97
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	95.95
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	95.94
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	95.94
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	95.88
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.85
PRK08251	248	short chain dehydrogenase; Provisional	95.85
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	95.81
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.8
PRK08219	227	short chain dehydrogenase; Provisional	95.78
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	95.78
PRK05854	313	short chain dehydrogenase; Provisional	95.78
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	95.73
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.73
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	95.72
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	95.68
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	95.68
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	95.65
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	95.65
PRK06947	248	glucose-1-dehydrogenase; Provisional	95.63
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.63
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	95.63
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	95.62
PRK06924	251	short chain dehydrogenase; Provisional	95.62
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.56
PRK07774	250	short chain dehydrogenase; Provisional	95.54
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	95.53
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.53
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.52
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.52
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	95.42
PRK13243	333	glyoxylate reductase; Reviewed	95.42
PRK08226	263	short chain dehydrogenase; Provisional	95.41
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	95.37
TIGR00438	188	rrmJ cell division protein FtsJ.	95.36
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.34
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.33
PRK06197	306	short chain dehydrogenase; Provisional	95.31
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.24
PRK07453	322	protochlorophyllide oxidoreductase; Validated	95.21
PRK06720	169	hypothetical protein; Provisional	95.11
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	95.08
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.07
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.06
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	95.04
PRK09009	235	C factor cell-cell signaling protein; Provisional	95.03
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.02
COG0743	385	Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomeras	95.0
TIGR01532	325	E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas	94.94
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	94.92
PLN03075	296	nicotianamine synthase; Provisional	94.9
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	94.8
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	94.79
PRK11207	197	tellurite resistance protein TehB; Provisional	94.78
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	94.77
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	94.62
PLN02928	347	oxidoreductase family protein	94.62
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	94.59
PRK07402	196	precorrin-6B methylase; Provisional	94.58
PLN02256	304	arogenate dehydrogenase	94.55
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.52
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	94.52
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	94.51
PRK07574	385	formate dehydrogenase; Provisional	94.49
PRK12548	289	shikimate 5-dehydrogenase; Provisional	94.49
PRK06953	222	short chain dehydrogenase; Provisional	94.46
PRK14967	223	putative methyltransferase; Provisional	94.37
PRK01581	374	speE spermidine synthase; Validated	94.37
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	94.35
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	94.3
PRK15116	268	sulfur acceptor protein CsdL; Provisional	94.29
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.29
PLN02244	340	tocopherol O-methyltransferase	94.27
PLN00016	378	RNA-binding protein; Provisional	94.27
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.26
PLN02696	454	1-deoxy-D-xylulose-5-phosphate reductoisomerase	94.24
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	94.23
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	94.23
PRK00811	283	spermidine synthase; Provisional	94.22
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	94.22
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	94.22
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	94.21
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.19
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	94.19
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	94.17
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	94.17
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	94.16
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.15
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	94.13
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	94.13
COG4122	219	Predicted O-methyltransferase [General function pr	94.12
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.1
PLN00203	519	glutamyl-tRNA reductase	94.1
PLN02695	370	GDP-D-mannose-3',5'-epimerase	94.07
KOG1208	314	consensus Dehydrogenases with different specificit	94.07
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	94.04
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	94.04
PRK08317	241	hypothetical protein; Provisional	93.99
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	93.98
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	93.93
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	93.92
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	93.91
PRK05562	223	precorrin-2 dehydrogenase; Provisional	93.88
PRK04148	134	hypothetical protein; Provisional	93.86
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	93.85
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	93.84
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	93.81
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	93.79
PRK08300	302	acetaldehyde dehydrogenase; Validated	93.77
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.76
PLN02896	353	cinnamyl-alcohol dehydrogenase	93.72
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.7
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	93.7
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	93.7
COG1028	251	FabG Dehydrogenases with different specificities (	93.69
PLN02214	342	cinnamoyl-CoA reductase	93.65
PRK04457	262	spermidine synthase; Provisional	93.65
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.64
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	93.64
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	93.58
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	93.51
PRK08655	437	prephenate dehydrogenase; Provisional	93.49
TIGR01327	525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	93.48
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	93.48
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	93.47
PLN03139	386	formate dehydrogenase; Provisional	93.47
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.45
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	93.44
PLN02476	278	O-methyltransferase	93.38
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	93.37
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	93.37
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	93.36
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.34
PLN02366	308	spermidine synthase	93.3
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.29
PLN02166	436	dTDP-glucose 4,6-dehydratase	93.21
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	93.18
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	93.13

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=4.5e-48  Score=341.63  Aligned_cols=270  Identities=31%  Similarity=0.445  Sum_probs=239.4

Q ss_pred             ccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecC
Q 021831           26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (307)
Q Consensus        26 ~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~  105 (307)
                      +.+|||+++++++.+  +++. +.+.|+|+++||+|+|.++|+|++|++.++|.   +....+|+++|||++|+|+++|+
T Consensus         1 ~~~mkA~~~~~~~~p--l~i~-e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~---~~~~~~P~ipGHEivG~V~~vG~   74 (339)
T COG1064           1 MMTMKAAVLKKFGQP--LEIE-EVPVPEPGPGEVLIKVEACGVCHTDLHVAKGD---WPVPKLPLIPGHEIVGTVVEVGE   74 (339)
T ss_pred             CcceEEEEEccCCCC--ceEE-eccCCCCCCCeEEEEEEEEeecchhhhhhcCC---CCCCCCCccCCcceEEEEEEecC
Confidence            468999999999888  8888 99999999999999999999999999999995   34456999999999999999999


Q ss_pred             CCCCCCCCCEEEE-ecC-----------------------CCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHH
Q 021831          106 SVRSLTVGQEVFG-ALH-----------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALT  161 (307)
Q Consensus       106 ~v~~~~~Gd~V~~-~~~-----------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~t  161 (307)
                      +|+.|++||||.. +..                       .+..+|+|+||+++|+++++++|++++++++|.+.|++.|
T Consensus        75 ~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT  154 (339)
T COG1064          75 GVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGIT  154 (339)
T ss_pred             CCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeee
Confidence            9999999999976 322                       2347899999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCceEEeCCChhHHHHhcCCccE
Q 021831          162 AWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDA  240 (307)
Q Consensus       162 a~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~~dv  240 (307)
                      +|++++ ..+++||++|+|.|+ |++|.+++|+|+.+|++|++++++++ ++.++++|++++++.++++..+.+.+.||+
T Consensus       155 ~y~alk-~~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~~d~  232 (339)
T COG1064         155 TYRALK-KANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADA  232 (339)
T ss_pred             Eeeehh-hcCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhhCcE
Confidence            999998 699999999999996 79999999999999999999977765 577999999999998877777777666999


Q ss_pred             EEECCCChhhHHHHHhcccCCcEEEEeccCc-c------------cccccccceechhHHHHHHHHHHHhhhhcccc
Q 021831          241 VLDTIGAPETERLGLNFLKRGGHYMTLHGET-A------------ALADHYGLALGLPIATTVLLKKRMQTWYSYGI  304 (307)
Q Consensus       241 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  304 (307)
                      +||+++ ...++.+++.|+++|+++++|.+. .            ....+.|...+......++++++....+.+.|
T Consensus       233 ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~Ikp~i  308 (339)
T COG1064         233 IIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKIKPEI  308 (339)
T ss_pred             EEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCceeeE
Confidence            999999 669999999999999999999984 2            34566777778888877777777777666655

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=1.9e-43  Score=318.28  Aligned_cols=238  Identities=37%  Similarity=0.598  Sum_probs=215.9

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++++..+++++.++++ |.+.|.|+++||+|||.++|+|+.|....+|.  ......+|+++|.|++|+|+++|++|+
T Consensus         1 mka~~~~~~g~~~~l~~~-e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~--~~~~~~~P~i~G~d~aG~V~avG~~V~   77 (326)
T COG0604           1 MKAVVVEEFGGPEVLKVV-EVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGL--APPVRPLPFIPGSEAAGVVVAVGSGVT   77 (326)
T ss_pred             CeEEEEeccCCCceeEEE-ecCCCCCCCCeEEEEEEEeecChHHHHhccCC--CCCCCCCCCcccceeEEEEEEeCCCCC
Confidence            789999999998889999 99999999999999999999999999999985  223456899999999999999999999


Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHH
Q 021831          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG  188 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G  188 (307)
                      .|++||||+... ....+|+|+||+.+|.+.++++|+++++++||+++..++|||+++....++++|++|||+||+|++|
T Consensus        78 ~~~~GdrV~~~~-~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG  156 (326)
T COG0604          78 GFKVGDRVAALG-GVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVG  156 (326)
T ss_pred             CcCCCCEEEEcc-CCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHH
Confidence            999999999885 1113599999999999999999999999999999999999999999889999999999999999999


Q ss_pred             HHHHHHHHHcCCEE-EEEeCCccHHHHHHcCCceEEeCCChhHHHHhc----C-CccEEEECCCChhhHHHHHhcccCCc
Q 021831          189 FAAVQFSVASGCHV-SATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK----G-KFDAVLDTIGAPETERLGLNFLKRGG  262 (307)
Q Consensus       189 ~~~~~~a~~~G~~V-i~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~----~-~~dvvid~~g~~~~~~~~~~~l~~~G  262 (307)
                      ++++|+|+.+|+.+ +++.++++.+.++++|++++++|.++++.+.+.    + ++|+|||++|+. .+..++.+|+++|
T Consensus       157 ~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~-~~~~~l~~l~~~G  235 (326)
T COG0604         157 SAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGD-TFAASLAALAPGG  235 (326)
T ss_pred             HHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHH-HHHHHHHHhccCC
Confidence            99999999999754 444666666789999999999999988888775    3 799999999999 8888999999999


Q ss_pred             EEEEeccCc
Q 021831          263 HYMTLHGET  271 (307)
Q Consensus       263 ~~v~~g~~~  271 (307)
                      +++.+|...
T Consensus       236 ~lv~ig~~~  244 (326)
T COG0604         236 RLVSIGALS  244 (326)
T ss_pred             EEEEEecCC
Confidence            999999876

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.3e-42  Score=294.71  Aligned_cols=279  Identities=24%  Similarity=0.258  Sum_probs=234.8

Q ss_pred             ccccccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEE
Q 021831           22 RFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVA  101 (307)
Q Consensus        22 ~~~~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~  101 (307)
                      ...+|.+.++|.+..+++...+++. +++.|+|+++||+|+++++|||++|++.+.|.   +....+|.++|||++|+|+
T Consensus         3 ~~~~p~k~~g~~~~~~~G~l~p~~~-~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gd---wg~s~~PlV~GHEiaG~Vv   78 (360)
T KOG0023|consen    3 SMSIPEKQFGWAARDPSGVLSPEVF-SFPVREPGENDVLVKIEYCGVCHSDLHAWKGD---WGLSKYPLVPGHEIAGVVV   78 (360)
T ss_pred             cccCchhhEEEEEECCCCCCCccee-EcCCCCCCCCcEEEEEEEEeccchhHHHhhcc---CCcccCCccCCceeeEEEE
Confidence            3567899999999999887678888 89999999999999999999999999999984   4447899999999999999


Q ss_pred             EecCCCCCCCCCCEEEE-ecC------------------------------CCCCCCcceeEEEecCCceeeCCCCCChh
Q 021831          102 AVGASVRSLTVGQEVFG-ALH------------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHA  150 (307)
Q Consensus       102 ~~G~~v~~~~~Gd~V~~-~~~------------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~  150 (307)
                      ++|++|+.|++||||-. +..                              ++...|+|++|+++++..+++||++++.+
T Consensus        79 kvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~  158 (360)
T KOG0023|consen   79 KVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLA  158 (360)
T ss_pred             EECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChh
Confidence            99999999999999932 111                              11245679999999999999999999999


Q ss_pred             hhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc--cHHHHHHcCCceEEeCC-C
Q 021831          151 DASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK--SIDRVLAAGAEQAVDYS-S  227 (307)
Q Consensus       151 ~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~--~~~~~~~~g~~~v~~~~-~  227 (307)
                      +||.+.|++.|+|..|. ..++.||+++-|.|+ |++|.+++|+|+++|.+|+++.++.  +.+..+.+|++..++.. +
T Consensus       159 ~aAPlLCaGITvYspLk-~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d  236 (360)
T KOG0023|consen  159 SAAPLLCAGITVYSPLK-RSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTED  236 (360)
T ss_pred             hccchhhcceEEeehhH-HcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCC
Confidence            99999999999999997 788889999999997 5599999999999999999997764  45557889999999988 6


Q ss_pred             hhHHHHhcCCccEEEECCC--ChhhHHHHHhcccCCcEEEEeccCcc-----------cccccccceechhHHHHHHHHH
Q 021831          228 KDIELAIKGKFDAVLDTIG--APETERLGLNFLKRGGHYMTLHGETA-----------ALADHYGLALGLPIATTVLLKK  294 (307)
Q Consensus       228 ~~~~~~~~~~~dvvid~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~-----------~~~~~~~~~~~~~~~~~~~~~~  294 (307)
                      +++.+.+.+..|.++|++.  ....++.++.+|+++|++|++|.|..           ....+.|..+|+.....+++++
T Consensus       237 ~d~~~~~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~Ldf  316 (360)
T KOG0023|consen  237 PDIMKAIMKTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEALDF  316 (360)
T ss_pred             HHHHHHHHHhhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHHHHH
Confidence            7888877755666666665  55588999999999999999999974           3446667777777777777776


Q ss_pred             HHhhhhcccccc
Q 021831          295 RMQTWYSYGIGC  306 (307)
Q Consensus       295 ~~~~~~~~~i~~  306 (307)
                      +....+...|+.
T Consensus       317 ~a~~~ik~~IE~  328 (360)
T KOG0023|consen  317 VARGLIKSPIEL  328 (360)
T ss_pred             HHcCCCcCceEE
Confidence            666655555443

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=9.8e-40  Score=280.86  Aligned_cols=239  Identities=26%  Similarity=0.336  Sum_probs=206.7

Q ss_pred             ccceeEEEEcccCCCceeEEcCcccCCCC-CCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEec
Q 021831           26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG  104 (307)
Q Consensus        26 ~~~~ka~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G  104 (307)
                      ..+|+|+++.   .+..++++ +.+.|++ .|+||+|++.++|||++|++++.......+....|+++|||.+|+|+++|
T Consensus         2 ~~~~~A~vl~---g~~di~i~-~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG   77 (354)
T KOG0024|consen    2 AADNLALVLR---GKGDIRIE-QRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVG   77 (354)
T ss_pred             CcccceeEEE---ccCceeEe-eCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhc
Confidence            4678999999   45568999 9999976 99999999999999999999998765555556789999999999999999


Q ss_pred             CCCCCCCCCCEEEEecCC------------------------CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHH
Q 021831          105 ASVRSLTVGQEVFGALHP------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAAL  160 (307)
Q Consensus       105 ~~v~~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~  160 (307)
                      +.|+++++||||..-+..                        .-.+|++++|++.+++.++++|++++++++|.+. +++
T Consensus        78 ~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~e-PLs  156 (354)
T KOG0024|consen   78 DEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIE-PLS  156 (354)
T ss_pred             ccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhccccc-chh
Confidence            999999999999754321                        1267999999999999999999999999998887 689


Q ss_pred             HHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEE-eCCccHHHHHHcCCceEEeCCCh----hHHHHh
Q 021831          161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSAT-CGSKSIDRVLAAGAEQAVDYSSK----DIELAI  234 (307)
Q Consensus       161 ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~-~~~~~~~~~~~~g~~~v~~~~~~----~~~~~~  234 (307)
                      ++||+.+ ++++++|++|||+|| |++|+++...|+.+|| +|+.+ ....+++.++++|++.+.+....    ++.+.+
T Consensus       157 V~~HAcr-~~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v  234 (354)
T KOG0024|consen  157 VGVHACR-RAGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELV  234 (354)
T ss_pred             hhhhhhh-hcCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHH
Confidence            9999997 999999999999996 9999999999999999 77776 66677888999999988776653    333333


Q ss_pred             c-----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          235 K-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       235 ~-----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .     ..+|+.|||+|....++.++..++.+|+++++|...
T Consensus       235 ~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~  276 (354)
T KOG0024|consen  235 EKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGA  276 (354)
T ss_pred             HhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCC
Confidence            3     249999999999989999999999999999999543

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=8.2e-39  Score=265.68  Aligned_cols=239  Identities=29%  Similarity=0.413  Sum_probs=220.6

Q ss_pred             cccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEec
Q 021831           25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG  104 (307)
Q Consensus        25 ~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G  104 (307)
                      .|...|-++++++|+.+.++++ +.|.|+|.++|++|+..++|+|..|.....|.+.   +.+.|+++|.|++|+|+++|
T Consensus         5 ~p~~~k~i~v~e~Ggydvlk~e-d~pv~~papgel~iknka~GlNfid~y~RkGlY~---~~plPytpGmEaaGvVvAvG   80 (336)
T KOG1197|consen    5 SPPLLKCIVVTEFGGYDVLKLE-DRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD---PAPLPYTPGMEAAGVVVAVG   80 (336)
T ss_pred             CCchheEEEEeccCCcceEEEe-eecCCCCCCCceEEeehhcCccHHHHHHhccccC---CCCCCcCCCcccceEEEEec
Confidence            4566788999999999999999 9999999999999999999999999999999532   56889999999999999999


Q ss_pred             CCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCC
Q 021831          105 ASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGG  184 (307)
Q Consensus       105 ~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~  184 (307)
                      ++|+++++||||.....    -|.|+|+..+|...+.++|+.+++.+++++...++|||..+.+..++++|++||++.|.
T Consensus        81 ~gvtdrkvGDrVayl~~----~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAA  156 (336)
T KOG1197|consen   81 EGVTDRKVGDRVAYLNP----FGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAA  156 (336)
T ss_pred             CCccccccccEEEEecc----chhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEecc
Confidence            99999999999987753    39999999999999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcc
Q 021831          185 GAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFL  258 (307)
Q Consensus       185 g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l  258 (307)
                      |++|+++.|+++..|+.+|.++++ ++++.+++.|++|.++++.+|+...+.     .|+|+++|.+|.. .+...+.+|
T Consensus       157 GGVGlll~Ql~ra~~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~d-t~~~sl~~L  235 (336)
T KOG1197|consen  157 GGVGLLLCQLLRAVGAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKD-TFAKSLAAL  235 (336)
T ss_pred             ccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceeeeccccch-hhHHHHHHh
Confidence            999999999999999988888665 556779999999999999999887765     4899999999999 889999999


Q ss_pred             cCCcEEEEeccCcc
Q 021831          259 KRGGHYMTLHGETA  272 (307)
Q Consensus       259 ~~~G~~v~~g~~~~  272 (307)
                      ++.|.+|++|....
T Consensus       236 k~~G~mVSfG~asg  249 (336)
T KOG1197|consen  236 KPMGKMVSFGNASG  249 (336)
T ss_pred             ccCceEEEeccccC
Confidence            99999999998754

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=2.8e-38  Score=274.14  Aligned_cols=238  Identities=29%  Similarity=0.364  Sum_probs=213.4

Q ss_pred             cceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCC
Q 021831           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (307)
Q Consensus        27 ~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~  106 (307)
                      +++|+.+..+.+.|  |+++ +.++++|++|||+||+.++|+|++|....+|.    .+..+|.++|||++|+|+++|++
T Consensus         1 mk~~aAV~~~~~~P--l~i~-ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~----~p~~~P~vLGHEgAGiVe~VG~g   73 (366)
T COG1062           1 MKTRAAVAREAGKP--LEIE-EVDLDPPRAGEVLVRITATGVCHTDAHTLSGD----DPEGFPAVLGHEGAGIVEAVGEG   73 (366)
T ss_pred             CCceEeeeecCCCC--eEEE-EEecCCCCCCeEEEEEEEeeccccchhhhcCC----CCCCCceecccccccEEEEecCC
Confidence            35788888887777  9999 99999999999999999999999999999993    45569999999999999999999


Q ss_pred             CCCCCCCCEEEEecCCC--------------------------------------------CCCCcceeEEEecCCceee
Q 021831          107 VRSLTVGQEVFGALHPT--------------------------------------------AVRGTYADYAVLSEDELTP  142 (307)
Q Consensus       107 v~~~~~Gd~V~~~~~~~--------------------------------------------~~~g~~~~~~~~~~~~~~~  142 (307)
                      |+.+++||+|+....+.                                            ...++|++|..++..++++
T Consensus        74 Vt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vk  153 (366)
T COG1062          74 VTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVK  153 (366)
T ss_pred             ccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEE
Confidence            99999999998654311                                            1225899999999999999


Q ss_pred             CCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEE-eCCccHHHHHHcCCc
Q 021831          143 KPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSAT-CGSKSIDRVLAAGAE  220 (307)
Q Consensus       143 ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~-~~~~~~~~~~~~g~~  220 (307)
                      ++++.+++.++.+.+...|.+-+..+.+++++|++|.|+| .|++|++++|-|+..|+ +++++ .+.++++.+++||++
T Consensus       154 i~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~G-lGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT  232 (366)
T COG1062         154 IDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFG-LGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGAT  232 (366)
T ss_pred             CCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEe-ccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCc
Confidence            9999999999999999999999988899999999999999 69999999999999999 89998 556778889999999


Q ss_pred             eEEeCCCh-hHHHHhc----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          221 QAVDYSSK-DIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       221 ~v~~~~~~-~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      +++|..+. +..+.+.    +++|.+|||+|+...+++++.+..++|+.+.+|.+..
T Consensus       233 ~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~  289 (366)
T COG1062         233 HFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGA  289 (366)
T ss_pred             eeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCC
Confidence            99998876 4655554    4899999999999999999999999999999998754

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=1.6e-37  Score=286.19  Aligned_cols=237  Identities=27%  Similarity=0.350  Sum_probs=205.7

Q ss_pred             eeEEEEcccCC------CceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEE
Q 021831           29 CRAVVLPRFGG------PEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAA  102 (307)
Q Consensus        29 ~ka~~~~~~~~------~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~  102 (307)
                      |||+++.++|+      ++.++++ +.+.|.|+++||+|||.++|||++|++++.|..    +..+|.++|||++|+|++
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~-~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~----~~~~p~i~GhE~~G~V~~   75 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIE-EVELDPPGPGEVLVKIAAAGLCHSDLSVINGDR----PRPLPMALGHEAAGVVVE   75 (371)
T ss_pred             CcceEEEecccccccccCCCceEE-EeecCCCCCCeEEEEEEEEeeCccchHhhcCCC----CCCCCccCCccceeEEEE
Confidence            79999999876      4789999 999999999999999999999999999998842    235689999999999999


Q ss_pred             ecCCCCCCCCCCEEEEecCCC--------------------------------------------CCCCcceeEEEecCC
Q 021831          103 VGASVRSLTVGQEVFGALHPT--------------------------------------------AVRGTYADYAVLSED  138 (307)
Q Consensus       103 ~G~~v~~~~~Gd~V~~~~~~~--------------------------------------------~~~g~~~~~~~~~~~  138 (307)
                      +|++++++++||+|++.....                                            ..+|+|+||+.++.+
T Consensus        76 vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~  155 (371)
T cd08281          76 VGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRR  155 (371)
T ss_pred             eCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEeccc
Confidence            999999999999998642110                                            012789999999999


Q ss_pred             ceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHH
Q 021831          139 ELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLA  216 (307)
Q Consensus       139 ~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~  216 (307)
                      .++++|+++++++++.+.+++++||+++.....+++|++|||.|+ |++|++++|+|+.+|+ +|+++..+ ++.+.+++
T Consensus       156 ~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~  234 (371)
T cd08281         156 SVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALARE  234 (371)
T ss_pred             ceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH
Confidence            999999999999999999999999999877788999999999995 9999999999999999 68888554 55677899


Q ss_pred             cCCceEEeCCChhHHHHhc----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          217 AGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       217 ~g~~~v~~~~~~~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +|+++++++.+.++.+.+.    +++|++||++|....+..++++++++|+++.+|...
T Consensus       235 ~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~  293 (371)
T cd08281         235 LGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPD  293 (371)
T ss_pred             cCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCC
Confidence            9999999988766655443    479999999998778899999999999999999753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=2.3e-37  Score=283.96  Aligned_cols=236  Identities=25%  Similarity=0.341  Sum_probs=204.1

Q ss_pred             ceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCC
Q 021831           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (307)
Q Consensus        28 ~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v  107 (307)
                      +||++++++++.+  ++++ +.+.|.|+++||+|||.++|+|++|++.+.|..    ...+|.++|||++|+|+++|+++
T Consensus         1 ~mka~~~~~~~~~--~~~~-~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~----~~~~p~i~G~e~~G~V~~vG~~v   73 (358)
T TIGR03451         1 TVRGVIARSKGAP--VELE-TIVVPDPGPGEVIVDIQACGVCHTDLHYREGGI----NDEFPFLLGHEAAGVVEAVGEGV   73 (358)
T ss_pred             CcEEEEEccCCCC--CEEE-EEECCCCCCCeEEEEEEEEeecHHHHHHhcCCc----cccCCcccccceEEEEEEeCCCC
Confidence            6999999988766  7788 999999999999999999999999999988842    23578899999999999999999


Q ss_pred             CCCCCCCEEEEecCCC------------------------------------CCCCcceeEEEecCCceeeCCCCCChhh
Q 021831          108 RSLTVGQEVFGALHPT------------------------------------AVRGTYADYAVLSEDELTPKPVSVTHAD  151 (307)
Q Consensus       108 ~~~~~Gd~V~~~~~~~------------------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~  151 (307)
                      ++|++||+|+......                                    ..+|+|+||+.++.+.++++|+++++++
T Consensus        74 ~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~  153 (358)
T TIGR03451        74 TDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAA  153 (358)
T ss_pred             cccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhH
Confidence            9999999998632100                                    1248999999999999999999999999


Q ss_pred             hccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeC-CccHHHHHHcCCceEEeCCChh
Q 021831          152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCG-SKSIDRVLAAGAEQAVDYSSKD  229 (307)
Q Consensus       152 aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~  229 (307)
                      ++.+.+.+.++|+++.....+++|++|||+|+ |++|++++|+|+.+|+ +|+++.+ .++.+.++++|+++++++.+.+
T Consensus       154 aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~  232 (358)
T TIGR03451       154 AGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTD  232 (358)
T ss_pred             hhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcC
Confidence            99999899999998877788999999999985 9999999999999999 5888854 4556778999999999987766


Q ss_pred             HHHHhc-----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          230 IELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       230 ~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +.+.+.     .++|++||++|+...+..++.+++++|+++.+|.+.
T Consensus       233 ~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~  279 (358)
T TIGR03451       233 PVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPT  279 (358)
T ss_pred             HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCC
Confidence            555433     379999999998768899999999999999999764

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=4.3e-37  Score=259.70  Aligned_cols=246  Identities=26%  Similarity=0.384  Sum_probs=213.2

Q ss_pred             ccccccccceeEEEEcccCCC-ceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEE
Q 021831           20 FVRFLVTTSCRAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISG   98 (307)
Q Consensus        20 ~~~~~~~~~~ka~~~~~~~~~-~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G   98 (307)
                      ..++.|+...|+++++.+|+| +.+++. +.++|++..++|+|+.+++.|||+|+..++|.++  .+...|.+-|+|++|
T Consensus        11 ssa~q~~~~~kalvY~~hgdP~kVlql~-~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYp--vrP~~PAVgGnEGv~   87 (354)
T KOG0025|consen   11 SSASQMPARSKALVYSEHGDPAKVLQLK-NLELPAVPGSDVLVKMLAAPINPSDINQIQGVYP--VRPELPAVGGNEGVG   87 (354)
T ss_pred             ccccccccccceeeecccCCchhhheee-cccCCCCCCCceeeeeeecCCChHHhhhhccccC--CCCCCCcccCCcceE
Confidence            344557778999999999988 788998 9999988888899999999999999999999654  335678999999999


Q ss_pred             EEEEecCCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEE
Q 021831           99 EVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRL  178 (307)
Q Consensus        99 ~V~~~G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~V  178 (307)
                      +|+.+|+++++|++||+|+......   |+|++|.+.+.+.++++++.++++.||++..+..|||++|.+..++++||+|
T Consensus        88 eVv~vGs~vkgfk~Gd~VIp~~a~l---GtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~v  164 (354)
T KOG0025|consen   88 EVVAVGSNVKGFKPGDWVIPLSANL---GTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSV  164 (354)
T ss_pred             EEEEecCCcCccCCCCeEeecCCCC---ccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCee
Confidence            9999999999999999999887643   9999999999999999999999999999999999999999999999999999


Q ss_pred             EEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-c----HHHHHHcCCceEEeCCCh---hHHHHh--cCCccEEEECCCCh
Q 021831          179 LVLGGGGAVGFAAVQFSVASGCHVSATCGSK-S----IDRVLAAGAEQAVDYSSK---DIELAI--KGKFDAVLDTIGAP  248 (307)
Q Consensus       179 lI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~----~~~~~~~g~~~v~~~~~~---~~~~~~--~~~~dvvid~~g~~  248 (307)
                      +-+||++.+|++++|+|+++|.+-+.++|++ +    .+.++.+|+++|+...+.   ++....  ..++.+.|||+|+.
T Consensus       165 IQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGk  244 (354)
T KOG0025|consen  165 IQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGK  244 (354)
T ss_pred             eecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCch
Confidence            9999999999999999999999877776654 3    244788999999864331   111111  14689999999999


Q ss_pred             hhHHHHHhcccCCcEEEEeccCcc
Q 021831          249 ETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       249 ~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                       +.....+.|..||+++++|+-+.
T Consensus       245 -sa~~iar~L~~GgtmvTYGGMSk  267 (354)
T KOG0025|consen  245 -SATEIARYLERGGTMVTYGGMSK  267 (354)
T ss_pred             -hHHHHHHHHhcCceEEEecCccC
Confidence             77888999999999999997654

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=1.6e-36  Score=276.20  Aligned_cols=234  Identities=27%  Similarity=0.376  Sum_probs=199.8

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||+++++.   ++.++++ +.+.|+|+++||+|++.++++|++|++.+.+....  +...|.++|||++|+|+++|++++
T Consensus         1 mka~~~~~---~~~l~~~-~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~   74 (339)
T cd08239           1 MRGAVFPG---DRTVELR-EFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRA--PAYQGVIPGHEPAGVVVAVGPGVT   74 (339)
T ss_pred             CeEEEEec---CCceEEE-ecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCc--cCCCCceeccCceEEEEEECCCCc
Confidence            78999984   4568998 99999999999999999999999999988764221  223578999999999999999999


Q ss_pred             CCCCCCEEEEecC------------------------CCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHH
Q 021831          109 SLTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (307)
Q Consensus       109 ~~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (307)
                      .+++||+|+..+.                        +...+|+|+||+.++.++++++|+++++++++.+.+++.|||+
T Consensus        75 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~  154 (339)
T cd08239          75 HFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYH  154 (339)
T ss_pred             cCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHH
Confidence            9999999987542                        1123689999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHh----cC-C
Q 021831          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAI----KG-K  237 (307)
Q Consensus       165 ~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~-Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~----~~-~  237 (307)
                      ++. ...+++|++|||+|+ |++|++++|+|+.+|++ |+++.++ ++.+.++++|+++++++.+.+ .+.+    .+ +
T Consensus       155 ~l~-~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~-~~~~~~~~~~~~  231 (339)
T cd08239         155 ALR-RVGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDD-VQEIRELTSGAG  231 (339)
T ss_pred             HHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcch-HHHHHHHhCCCC
Confidence            996 678899999999985 99999999999999997 8888554 456678999999999887654 3322    23 7


Q ss_pred             ccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       238 ~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +|++||++|+...+..++++++++|+++.+|...
T Consensus       232 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  265 (339)
T cd08239         232 ADVAIECSGNTAARRLALEAVRPWGRLVLVGEGG  265 (339)
T ss_pred             CCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCC
Confidence            9999999999867788999999999999999754

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.7e-36  Score=280.28  Aligned_cols=241  Identities=22%  Similarity=0.271  Sum_probs=204.3

Q ss_pred             cccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEec
Q 021831           25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG  104 (307)
Q Consensus        25 ~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G  104 (307)
                      -|.+||++++..++++  +.++ +.+.|.|+++||+|||.++|+|++|++.+.|...  ....+|.++|||++|+|+++|
T Consensus         7 ~~~~mka~~~~~~~~~--~~~~-e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~--~~~~~p~i~GhE~~G~V~~vG   81 (381)
T PLN02740          7 KVITCKAAVAWGPGEP--LVME-EIRVDPPQKMEVRIKILYTSICHTDLSAWKGENE--AQRAYPRILGHEAAGIVESVG   81 (381)
T ss_pred             cceeeEEEEEecCCCC--cEEE-EeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCc--ccCCCCccccccceEEEEEeC
Confidence            3457999999976543  7777 8999999999999999999999999999988432  123568999999999999999


Q ss_pred             CCCCCCCCCCEEEEecCCC-----------------------------------------------CCCCcceeEEEecC
Q 021831          105 ASVRSLTVGQEVFGALHPT-----------------------------------------------AVRGTYADYAVLSE  137 (307)
Q Consensus       105 ~~v~~~~~Gd~V~~~~~~~-----------------------------------------------~~~g~~~~~~~~~~  137 (307)
                      ++++.|++||||++.....                                               ..+|+|+||+.++.
T Consensus        82 ~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~  161 (381)
T PLN02740         82 EGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDS  161 (381)
T ss_pred             CCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEeh
Confidence            9999999999998753110                                               01589999999999


Q ss_pred             CceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeC-CccHHHHH
Q 021831          138 DELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCG-SKSIDRVL  215 (307)
Q Consensus       138 ~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~-~~~~~~~~  215 (307)
                      +.++++|+++++++++.+.+++.|+|+++....++++|++|||+|+ |++|++++|+|+.+|+ +|+++.+ .++.+.++
T Consensus       162 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~  240 (381)
T PLN02740        162 ACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK  240 (381)
T ss_pred             HHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH
Confidence            9999999999999999999899999998876789999999999995 9999999999999999 6888854 45677789


Q ss_pred             HcCCceEEeCCCh--hHHHHhc----CCccEEEECCCChhhHHHHHhcccCC-cEEEEeccCc
Q 021831          216 AAGAEQAVDYSSK--DIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGET  271 (307)
Q Consensus       216 ~~g~~~v~~~~~~--~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~  271 (307)
                      ++|+++++++.+.  ++.+.+.    +++|++||++|+...+..++.+++++ |+++.+|...
T Consensus       241 ~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~  303 (381)
T PLN02740        241 EMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHP  303 (381)
T ss_pred             HcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCC
Confidence            9999999987653  3444332    37999999999877889999999996 9999999764

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=5.6e-36  Score=274.78  Aligned_cols=240  Identities=20%  Similarity=0.210  Sum_probs=197.7

Q ss_pred             ccccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEe
Q 021831           24 LVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAV  103 (307)
Q Consensus        24 ~~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~  103 (307)
                      .-|++++++.++..  ...++.. +.+.|.|+++||+|||.++|||++|++.+.|...   ...+|.++|||++|+|+++
T Consensus         8 ~~~~~~~~~~~~~~--~~~l~~~-~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~---~~~~p~i~GhE~~G~V~~v   81 (360)
T PLN02586          8 EHPQKAFGWAARDP--SGVLSPF-HFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWG---FTRYPIVPGHEIVGIVTKL   81 (360)
T ss_pred             hchhheeEEEecCC--CCCceEE-eecCCCCCCCeEEEEEEEecCChhhHhhhcCCcC---CCCCCccCCcceeEEEEEE
Confidence            34566777777654  3457777 8888899999999999999999999999887432   2356889999999999999


Q ss_pred             cCCCCCCCCCCEEEEecC-------------------------------CCCCCCcceeEEEecCCceeeCCCCCChhhh
Q 021831          104 GASVRSLTVGQEVFGALH-------------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADA  152 (307)
Q Consensus       104 G~~v~~~~~Gd~V~~~~~-------------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a  152 (307)
                      |++++.|++||+|+....                               +...+|+|+||+.++.+.++++|++++++++
T Consensus        82 G~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~a  161 (360)
T PLN02586         82 GKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAG  161 (360)
T ss_pred             CCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHh
Confidence            999999999999974211                               0112599999999999999999999999999


Q ss_pred             ccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-c-HHHHHHcCCceEEeCCChhH
Q 021831          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-S-IDRVLAAGAEQAVDYSSKDI  230 (307)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~-~~~~~~~g~~~v~~~~~~~~  230 (307)
                      +.+.+.+.|+|+++.....+++|++|||.|+ |++|++++|+|+.+|++|+++..++ + ...++++|+++++++.+.+.
T Consensus       162 a~l~~~~~ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~  240 (360)
T PLN02586        162 APLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEK  240 (360)
T ss_pred             hhhhcchHHHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHH
Confidence            9999999999999876667789999999885 9999999999999999988775443 3 34567899999988765432


Q ss_pred             HHHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          231 ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       231 ~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      .....+++|++||++|+...+..++++++++|+++.+|..
T Consensus       241 ~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~  280 (360)
T PLN02586        241 MKAAIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLP  280 (360)
T ss_pred             HHhhcCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCC
Confidence            2222357999999999876889999999999999999864

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-36  Score=274.33  Aligned_cols=235  Identities=20%  Similarity=0.265  Sum_probs=193.0

Q ss_pred             ccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecC
Q 021831           26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (307)
Q Consensus        26 ~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~  105 (307)
                      .-+||+.+++   +++.++++ +.+.| +.++||+|||.++|||++|++++.+.........+|.++|||++|+|+++  
T Consensus         2 ~~~~~~~~~~---~~~~~~~~-~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--   74 (343)
T PRK09880          2 QVKTQSCVVA---GKKDVAVT-EQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--   74 (343)
T ss_pred             cccceEEEEe---cCCceEEE-ecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--
Confidence            3468899998   55668888 88887 68999999999999999999987532111123457899999999999999  


Q ss_pred             CCCCCCCCCEEEEecCC----------------------------CCCCCcceeEEEecCCceeeCCCCCChhhhccccc
Q 021831          106 SVRSLTVGQEVFGALHP----------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPF  157 (307)
Q Consensus       106 ~v~~~~~Gd~V~~~~~~----------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~  157 (307)
                      ++++|++||+|+..+..                            ...+|+|+||+.++.+.++++|+++++++++ +..
T Consensus        75 ~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~  153 (343)
T PRK09880         75 DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAE  153 (343)
T ss_pred             cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhc
Confidence            78899999999864210                            0136999999999999999999999987655 445


Q ss_pred             hHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeC-CccHHHHHHcCCceEEeCCChhHHHHhc
Q 021831          158 AALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCG-SKSIDRVLAAGAEQAVDYSSKDIELAIK  235 (307)
Q Consensus       158 ~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~  235 (307)
                      ++.++|+++. .....+|++|+|+|+ |++|++++|+|+.+|+ +|+++.+ .++++.++++|+++++++.+.++.+...
T Consensus       154 ~~~~a~~al~-~~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~  231 (343)
T PRK09880        154 PLAVAIHAAH-QAGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKA  231 (343)
T ss_pred             HHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhc
Confidence            7889999986 455668999999995 9999999999999999 6887754 4567778999999999988766554433


Q ss_pred             --CCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          236 --GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       236 --~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                        +++|++||++|+...+..++++++++|+++.+|..
T Consensus       232 ~~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~  268 (343)
T PRK09880        232 EKGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMG  268 (343)
T ss_pred             cCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccC
Confidence              46999999999876889999999999999999964

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=1e-35  Score=273.90  Aligned_cols=235  Identities=26%  Similarity=0.339  Sum_probs=200.2

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++++..++.  .++++ +.+.|+|+++||+|||.++|+|++|++.+.|...   ...+|.++|||++|+|+++|++++
T Consensus         2 ~~a~~~~~~~~--~l~~~-~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~---~~~~p~i~GhE~~G~V~~vG~~v~   75 (368)
T TIGR02818         2 SRAAVAWAAGQ--PLKIE-EVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADP---EGVFPVILGHEGAGIVEAVGEGVT   75 (368)
T ss_pred             ceEEEEecCCC--CeEEE-EecCCCCCCCeEEEEEEEecccHHHHHHhcCCCC---CCCCCeeeccccEEEEEEECCCCc
Confidence            78999887654  48888 8999999999999999999999999999888432   235689999999999999999999


Q ss_pred             CCCCCCEEEEecCCC------------------------------------------C--CCCcceeEEEecCCceeeCC
Q 021831          109 SLTVGQEVFGALHPT------------------------------------------A--VRGTYADYAVLSEDELTPKP  144 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~~------------------------------------------~--~~g~~~~~~~~~~~~~~~ip  144 (307)
                      +|++||||+......                                          .  .+|+|+||+.+|.+.++++|
T Consensus        76 ~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP  155 (368)
T TIGR02818        76 SVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKIN  155 (368)
T ss_pred             cCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECC
Confidence            999999998753110                                          0  13699999999999999999


Q ss_pred             CCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeC-CccHHHHHHcCCceE
Q 021831          145 VSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCG-SKSIDRVLAAGAEQA  222 (307)
Q Consensus       145 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~-~~~~~~~~~~g~~~v  222 (307)
                      +++++++++.+.+++.++|+++.....+++|++|||+|+ |++|++++|+|+.+|+ +|+++.+ .++++.++++|++++
T Consensus       156 ~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~  234 (368)
T TIGR02818       156 PAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDC  234 (368)
T ss_pred             CCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeE
Confidence            999999999999999999999877889999999999985 9999999999999999 7988855 455677899999999


Q ss_pred             EeCCC--hhHHHHh----cCCccEEEECCCChhhHHHHHhcccCC-cEEEEeccC
Q 021831          223 VDYSS--KDIELAI----KGKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGE  270 (307)
Q Consensus       223 ~~~~~--~~~~~~~----~~~~dvvid~~g~~~~~~~~~~~l~~~-G~~v~~g~~  270 (307)
                      +++.+  .++.+.+    .+++|++||++|+...+..++++++++ |+++.+|.+
T Consensus       235 i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~  289 (368)
T TIGR02818       235 VNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVA  289 (368)
T ss_pred             EcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEecc
Confidence            98764  2333332    247999999999876889999999886 999999975

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=3e-35  Score=270.98  Aligned_cols=237  Identities=22%  Similarity=0.321  Sum_probs=202.2

Q ss_pred             ceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCC
Q 021831           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (307)
Q Consensus        28 ~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v  107 (307)
                      +||++++..++.+  ++++ +.+.|+|+++||+|||.++|+|++|++.+.|...   ...+|.++|||++|+|+++|+++
T Consensus         2 ~~ka~~~~~~~~~--~~l~-~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v   75 (369)
T cd08301           2 TCKAAVAWEAGKP--LVIE-EVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQ---TPLFPRILGHEAAGIVESVGEGV   75 (369)
T ss_pred             ccEEEEEecCCCC--cEEE-EeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCC---CCCCCcccccccceEEEEeCCCC
Confidence            7999999976544  8888 8999999999999999999999999999988432   34578999999999999999999


Q ss_pred             CCCCCCCEEEEecCCC---------------------------------------------CCCCcceeEEEecCCceee
Q 021831          108 RSLTVGQEVFGALHPT---------------------------------------------AVRGTYADYAVLSEDELTP  142 (307)
Q Consensus       108 ~~~~~Gd~V~~~~~~~---------------------------------------------~~~g~~~~~~~~~~~~~~~  142 (307)
                      ++|++||||+......                                             ...|+|+||+.++.+.+++
T Consensus        76 ~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~  155 (369)
T cd08301          76 TDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAK  155 (369)
T ss_pred             CccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEE
Confidence            9999999998753110                                             0237899999999999999


Q ss_pred             CCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCCc
Q 021831          143 KPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGAE  220 (307)
Q Consensus       143 ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~~  220 (307)
                      +|+++++++++.+.+.+.++|+++....++++|++|||+|+ |++|++++|+|+.+|+ +|+++.++ ++.+.++++|++
T Consensus       156 iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~  234 (369)
T cd08301         156 INPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVT  234 (369)
T ss_pred             CCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc
Confidence            99999999999999899999998877789999999999985 9999999999999999 79888654 556778999999


Q ss_pred             eEEeCCC--hhHHHHhc----CCccEEEECCCChhhHHHHHhcccCC-cEEEEeccCc
Q 021831          221 QAVDYSS--KDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGET  271 (307)
Q Consensus       221 ~v~~~~~--~~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~  271 (307)
                      .++++..  .++.+.+.    +++|++||++|+...+..++.+++++ |+++.+|...
T Consensus       235 ~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~  292 (369)
T cd08301         235 EFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPH  292 (369)
T ss_pred             eEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCC
Confidence            9988765  23433332    47999999999876889999999996 9999999764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=9.6e-35  Score=267.67  Aligned_cols=239  Identities=21%  Similarity=0.223  Sum_probs=195.7

Q ss_pred             ceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCC
Q 021831           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (307)
Q Consensus        28 ~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v  107 (307)
                      .+|++.+...+.+..++.. +.+.|.|+++||+|||.++|||++|++++.|...   ...+|.++|||++|+|+++|+++
T Consensus         4 ~~~a~~~~~~~~~~~l~~~-~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~---~~~~p~i~GhE~aG~Vv~vG~~v   79 (375)
T PLN02178          4 QNKAFGWAANDESGVLSPF-HFSRRENGENDVTVKILFCGVCHSDLHTIKNHWG---FSRYPIIPGHEIVGIATKVGKNV   79 (375)
T ss_pred             cceeEEEEEccCCCCceEE-eecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCC---CCCCCcccCceeeEEEEEECCCC
Confidence            4556666666666668887 8888899999999999999999999999988431   12468899999999999999999


Q ss_pred             CCCCCCCEEEEecC-------------------------------CCCCCCcceeEEEecCCceeeCCCCCChhhhcccc
Q 021831          108 RSLTVGQEVFGALH-------------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIP  156 (307)
Q Consensus       108 ~~~~~Gd~V~~~~~-------------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~  156 (307)
                      ++|++||+|+....                               +...+|+|+||+.++.+.++++|+++++++++.+.
T Consensus        80 ~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~  159 (375)
T PLN02178         80 TKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLL  159 (375)
T ss_pred             CccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhh
Confidence            99999999974211                               01126899999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHcC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-c-HHHHHHcCCceEEeCCChhHHHH
Q 021831          157 FAALTAWRALKCAAR-MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-S-IDRVLAAGAEQAVDYSSKDIELA  233 (307)
Q Consensus       157 ~~~~ta~~~l~~~~~-~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~-~~~~~~~g~~~v~~~~~~~~~~~  233 (307)
                      +.+.|+|+++..... .++|++|+|.|+ |++|++++|+|+.+|++|+++.+++ + .+.++++|+++++++.+.+....
T Consensus       160 ~~~~ta~~al~~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~  238 (375)
T PLN02178        160 CAGITVYSPMKYYGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKE  238 (375)
T ss_pred             ccchHHHHHHHHhCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHH
Confidence            999999998864433 368999999985 9999999999999999988886543 3 45678999999988765321112


Q ss_pred             hcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       234 ~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ..+++|++||++|+...+..++++++++|+++.+|.+.
T Consensus       239 ~~~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~  276 (375)
T PLN02178        239 AVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPE  276 (375)
T ss_pred             hhCCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCC
Confidence            22579999999998867899999999999999999653

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=3.3e-35  Score=270.58  Aligned_cols=236  Identities=25%  Similarity=0.361  Sum_probs=201.1

Q ss_pred             ceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCC
Q 021831           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (307)
Q Consensus        28 ~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v  107 (307)
                      +||++++...+.  .++++ +.+.|.|+++||+|||.++|+|++|++.+.|..+   ...+|.++|||++|+|+++|+++
T Consensus         2 ~~~a~~~~~~~~--~~~~~-~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~---~~~~p~v~G~E~~G~V~~vG~~v   75 (368)
T cd08300           2 TCKAAVAWEAGK--PLSIE-EVEVAPPKAGEVRIKILATGVCHTDAYTLSGADP---EGLFPVILGHEGAGIVESVGEGV   75 (368)
T ss_pred             cceEEEEecCCC--CcEEE-EeecCCCCCCEEEEEEEEEEechhhHHHhcCCCc---cCCCCceeccceeEEEEEeCCCC
Confidence            689999886654  47888 8999999999999999999999999999888432   23578999999999999999999


Q ss_pred             CCCCCCCEEEEecCCC--------------------------------------------CCCCcceeEEEecCCceeeC
Q 021831          108 RSLTVGQEVFGALHPT--------------------------------------------AVRGTYADYAVLSEDELTPK  143 (307)
Q Consensus       108 ~~~~~Gd~V~~~~~~~--------------------------------------------~~~g~~~~~~~~~~~~~~~i  143 (307)
                      ++|++||+|++.....                                            ...|+|+||+.++.+.++++
T Consensus        76 ~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i  155 (368)
T cd08300          76 TSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKI  155 (368)
T ss_pred             ccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeC
Confidence            9999999998752110                                            01368999999999999999


Q ss_pred             CCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCCce
Q 021831          144 PVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGAEQ  221 (307)
Q Consensus       144 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~~~  221 (307)
                      |+++++++++.+.+++.++|+++.....+++|++|||+|+ |++|++++|+|+.+|+ +|+++.++ ++.+.++++|+++
T Consensus       156 P~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~  234 (368)
T cd08300         156 NPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATD  234 (368)
T ss_pred             CCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCE
Confidence            9999999999999999999998876788999999999985 9999999999999999 78888654 4566788999999


Q ss_pred             EEeCCCh--hHHHHhc----CCccEEEECCCChhhHHHHHhcccCC-cEEEEeccC
Q 021831          222 AVDYSSK--DIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGE  270 (307)
Q Consensus       222 v~~~~~~--~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~-G~~v~~g~~  270 (307)
                      ++++.+.  ++.+.+.    +++|+|||++|+...+..++++++++ |+++.+|..
T Consensus       235 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~  290 (368)
T cd08300         235 CVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVA  290 (368)
T ss_pred             EEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccC
Confidence            9988753  3444332    47999999999876889999999987 999999975

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.4e-35  Score=253.60  Aligned_cols=240  Identities=25%  Similarity=0.370  Sum_probs=213.6

Q ss_pred             ccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecC
Q 021831           26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (307)
Q Consensus        26 ~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~  105 (307)
                      +.+|||.+..+++.|  |.++ |..+++|+..||+||+.++++|++|...++|..   ....+|.++|||++|+|+.+|.
T Consensus         5 vI~CKAAV~w~a~~P--L~IE-ei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~---~~~~fP~IlGHEaaGIVESvGe   78 (375)
T KOG0022|consen    5 VITCKAAVAWEAGKP--LVIE-EIEVAPPKAHEVRIKILATGVCHTDAYVWSGKD---PEGLFPVILGHEAAGIVESVGE   78 (375)
T ss_pred             ceEEeEeeeccCCCC--eeEE-EEEeCCCCCceEEEEEEEEeeccccceeecCCC---ccccCceEecccceeEEEEecC
Confidence            468999999988887  8888 999999999999999999999999999999942   4567899999999999999999


Q ss_pred             CCCCCCCCCEEEEecCCC---------------------------------------------CCCCcceeEEEecCCce
Q 021831          106 SVRSLTVGQEVFGALHPT---------------------------------------------AVRGTYADYAVLSEDEL  140 (307)
Q Consensus       106 ~v~~~~~Gd~V~~~~~~~---------------------------------------------~~~g~~~~~~~~~~~~~  140 (307)
                      +|+++++||+|+....+.                                             ....+|+||.+++..++
T Consensus        79 gV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v  158 (375)
T KOG0022|consen   79 GVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISV  158 (375)
T ss_pred             CccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeeccee
Confidence            999999999998654321                                             12358999999999999


Q ss_pred             eeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEE-eCCccHHHHHHcC
Q 021831          141 TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSAT-CGSKSIDRVLAAG  218 (307)
Q Consensus       141 ~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~-~~~~~~~~~~~~g  218 (307)
                      ++|++..+.+.++.+.+...|+|-+.-+.+++++|+++.|+| .|.+|+++++-||..|| ++|++ .++++.+.++++|
T Consensus       159 ~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfG-LG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fG  237 (375)
T KOG0022|consen  159 AKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFG-LGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFG  237 (375)
T ss_pred             EecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEe-cchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcC
Confidence            999999999999999999999999988899999999999999 69999999999999999 99999 6677788999999


Q ss_pred             CceEEeCCCh--hHHHHhc----CCccEEEECCCChhhHHHHHhcccCC-cEEEEeccCcc
Q 021831          219 AEQAVDYSSK--DIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGETA  272 (307)
Q Consensus       219 ~~~v~~~~~~--~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~  272 (307)
                      +.+.+|..+.  ...+.+.    +++|..|||+|+...+.+++.+...| |+-+.+|....
T Consensus       238 aTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~  298 (375)
T KOG0022|consen  238 ATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAA  298 (375)
T ss_pred             cceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCC
Confidence            9999998732  2333333    69999999999999999999999998 99999997753

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=4.1e-35  Score=268.70  Aligned_cols=236  Identities=24%  Similarity=0.294  Sum_probs=187.2

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||+++++..+ ++ ++++ +.|.|+|+++||+|||.++|||++|++.+.|.........+|.++|||++|+|+++|++ +
T Consensus         1 mka~~~~~~~-~~-l~~~-~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~   76 (355)
T cd08230           1 MKAIAVKPGK-PG-VRVV-DIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-S   76 (355)
T ss_pred             CceeEecCCC-CC-CeEE-eCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-C
Confidence            6889988533 33 8898 99999999999999999999999999999985432222346889999999999999999 9


Q ss_pred             CCCCCCEEEEecCCC--------------------------CCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHH
Q 021831          109 SLTVGQEVFGALHPT--------------------------AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTA  162 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~~--------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta  162 (307)
                      .|++||||+......                          ..+|+|+||+.++.+.++++|++++  +++.+..++.++
T Consensus        77 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~--~~a~~~~p~~~~  154 (355)
T cd08230          77 GLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA--DVGVLLEPLSVV  154 (355)
T ss_pred             CCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC--cceeecchHHHH
Confidence            999999998653210                          1358999999999999999999998  344444566655


Q ss_pred             HHHHHH------HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC----CccHHHHHHcCCceEEeCCChhHHH
Q 021831          163 WRALKC------AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG----SKSIDRVLAAGAEQAVDYSSKDIEL  232 (307)
Q Consensus       163 ~~~l~~------~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~----~~~~~~~~~~g~~~v~~~~~~~~~~  232 (307)
                      ++++..      ....++|++|+|+|+ |++|++++|+|+.+|++|+++.+    .++.+.++++|++. +++.++++.+
T Consensus       155 ~~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~~~~~~  232 (355)
T cd08230         155 EKAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATY-VNSSKTPVAE  232 (355)
T ss_pred             HHHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE-ecCCccchhh
Confidence            554432      123578999999995 99999999999999999988875    34566789999987 4555544433


Q ss_pred             H-hcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          233 A-IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       233 ~-~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      . ..+++|+|||++|....+..++++++++|+++++|....
T Consensus       233 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~  273 (355)
T cd08230         233 VKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGG  273 (355)
T ss_pred             hhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCC
Confidence            1 125799999999987688999999999999999997543

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=1e-34  Score=268.09  Aligned_cols=235  Identities=21%  Similarity=0.314  Sum_probs=199.4

Q ss_pred             cceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCC
Q 021831           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (307)
Q Consensus        27 ~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~  106 (307)
                      ..||++++..++  +.++++ +.+.|.|+++||+|||.++|+|++|++.+.|.      ..+|.++|||++|+|+++|++
T Consensus        11 ~~mka~~~~~~~--~~~~~~-e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~------~~~p~i~GhE~~G~V~~vG~~   81 (378)
T PLN02827         11 ITCRAAVAWGAG--EALVME-EVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ------ALFPRIFGHEASGIVESIGEG   81 (378)
T ss_pred             ceeEEEEEecCC--CCceEE-EeecCCCCCCEEEEEEEEEecChhHHHHhcCC------CCCCeeecccceEEEEEcCCC
Confidence            469999998644  348888 89999999999999999999999999988772      145789999999999999999


Q ss_pred             CCCCCCCCEEEEecCCC--------------------------------------------CCCCcceeEEEecCCceee
Q 021831          107 VRSLTVGQEVFGALHPT--------------------------------------------AVRGTYADYAVLSEDELTP  142 (307)
Q Consensus       107 v~~~~~Gd~V~~~~~~~--------------------------------------------~~~g~~~~~~~~~~~~~~~  142 (307)
                      +++|++||+|+......                                            ..+|+|+||+.++.+.+++
T Consensus        82 v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~  161 (378)
T PLN02827         82 VTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK  161 (378)
T ss_pred             CcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEE
Confidence            99999999998764210                                            0138999999999999999


Q ss_pred             CCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEe-CCccHHHHHHcCCc
Q 021831          143 KPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATC-GSKSIDRVLAAGAE  220 (307)
Q Consensus       143 ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~-~~~~~~~~~~~g~~  220 (307)
                      +|+++++++++.+.+.+.++|+++....++++|++|||+|+ |++|++++|+|+.+|+ +|+++. +.++.+.++++|++
T Consensus       162 iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~  240 (378)
T PLN02827        162 VDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVT  240 (378)
T ss_pred             CCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCc
Confidence            99999999999888888899987766788999999999995 9999999999999999 577775 44566778999999


Q ss_pred             eEEeCCC--hhHHHHhc----CCccEEEECCCChhhHHHHHhcccCC-cEEEEeccCc
Q 021831          221 QAVDYSS--KDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGET  271 (307)
Q Consensus       221 ~v~~~~~--~~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~  271 (307)
                      +++++.+  .++.+.+.    +++|++||++|....+..+++.++++ |+++.+|.+.
T Consensus       241 ~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~  298 (378)
T PLN02827        241 DFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPK  298 (378)
T ss_pred             EEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcC
Confidence            9998765  24444332    47999999999876789999999998 9999999764

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=5.7e-34  Score=261.27  Aligned_cols=238  Identities=21%  Similarity=0.242  Sum_probs=197.6

Q ss_pred             cceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCC
Q 021831           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (307)
Q Consensus        27 ~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~  106 (307)
                      +.+++++++.+++.  ++++ +.+.|+|+++||+|||.++++|++|+..+.|...   ...+|.++|||++|+|+++|++
T Consensus         8 ~~~~~~~~~~~~~~--~~~~-~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~---~~~~p~i~G~E~~G~Vv~vG~~   81 (357)
T PLN02514          8 KKTTGWAARDPSGH--LSPY-TYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLG---MSNYPMVPGHEVVGEVVEVGSD   81 (357)
T ss_pred             ceEEEEEEecCCCC--ceEE-eecCCCCCCCcEEEEEEEeccChHHHHhhcCCcC---cCCCCccCCceeeEEEEEECCC
Confidence            34899999988755  7888 8899999999999999999999999998887432   2246889999999999999999


Q ss_pred             CCCCCCCCEEEEecC-------------------------------CCCCCCcceeEEEecCCceeeCCCCCChhhhccc
Q 021831          107 VRSLTVGQEVFGALH-------------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAI  155 (307)
Q Consensus       107 v~~~~~Gd~V~~~~~-------------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~  155 (307)
                      +++|++||+|+....                               +...+|+|+||+.++.+.++++|+++++++++.+
T Consensus        82 v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l  161 (357)
T PLN02514         82 VSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPL  161 (357)
T ss_pred             cccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhh
Confidence            999999999974210                               0113599999999999999999999999999999


Q ss_pred             cchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cH-HHHHHcCCceEEeCCChhHHHH
Q 021831          156 PFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SI-DRVLAAGAEQAVDYSSKDIELA  233 (307)
Q Consensus       156 ~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~-~~~~~~g~~~v~~~~~~~~~~~  233 (307)
                      .+++.|||+++......++|++|+|+| +|++|++++|+|+.+|++++++++.+ +. ..++++|++++++..+.+....
T Consensus       162 ~~~~~ta~~al~~~~~~~~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~  240 (357)
T PLN02514        162 LCAGVTVYSPLSHFGLKQSGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQE  240 (357)
T ss_pred             hhhHHHHHHHHHHcccCCCCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHH
Confidence            999999999987666668999999997 59999999999999999888876554 33 3356799988877654332222


Q ss_pred             hcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       234 ~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ...++|++||++|....+..++++++++|+++.+|...
T Consensus       241 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~  278 (357)
T PLN02514        241 AADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVIN  278 (357)
T ss_pred             hcCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCC
Confidence            23579999999998668899999999999999999753

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=3.7e-34  Score=259.70  Aligned_cols=228  Identities=25%  Similarity=0.256  Sum_probs=194.7

Q ss_pred             EEEcccCCC--ceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCCC
Q 021831           32 VVLPRFGGP--EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS  109 (307)
Q Consensus        32 ~~~~~~~~~--~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~  109 (307)
                      +.+..++.+  ..++++ +.|.|.|+++||+|||.++|+|++|++...|..+   ....|.++|||++|+|+++|+++++
T Consensus         2 ~~~~~~g~~~~~~l~~~-~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~   77 (329)
T TIGR02822         2 WEVERPGPIEDGPLRFV-ERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLP---VHRPRVTPGHEVVGEVAGRGADAGG   77 (329)
T ss_pred             eeeecCCcCCCCCceEE-eCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCC---CCCCCccCCcceEEEEEEECCCCcc
Confidence            566666655  578999 9999999999999999999999999999988432   1234789999999999999999999


Q ss_pred             CCCCCEEEEecC------------------------CCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHH
Q 021831          110 LTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (307)
Q Consensus       110 ~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (307)
                      +++||+|+....                        +...+|+|+||+.++.+.++++|+++++++++.+.+++.|||++
T Consensus        78 ~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~  157 (329)
T TIGR02822        78 FAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRA  157 (329)
T ss_pred             cCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHH
Confidence            999999974211                        01235899999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEEC
Q 021831          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDT  244 (307)
Q Consensus       166 l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~  244 (307)
                      +. ..++++|++|||+|+ |++|++++|+|+.+|++|+++.+ .++.+.++++|+++++++.+..     .+++|+++++
T Consensus       158 ~~-~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~-----~~~~d~~i~~  230 (329)
T TIGR02822       158 LL-RASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDTP-----PEPLDAAILF  230 (329)
T ss_pred             HH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceeccccccC-----cccceEEEEC
Confidence            96 688999999999996 99999999999999999888865 4566779999999998754321     1468999999


Q ss_pred             CCChhhHHHHHhcccCCcEEEEeccC
Q 021831          245 IGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       245 ~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      .+....+..++++++++|+++.+|..
T Consensus       231 ~~~~~~~~~~~~~l~~~G~~v~~G~~  256 (329)
T TIGR02822       231 APAGGLVPPALEALDRGGVLAVAGIH  256 (329)
T ss_pred             CCcHHHHHHHHHhhCCCcEEEEEecc
Confidence            88777899999999999999999974

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=2.3e-34  Score=264.75  Aligned_cols=236  Identities=23%  Similarity=0.337  Sum_probs=200.0

Q ss_pred             ceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCC
Q 021831           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (307)
Q Consensus        28 ~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v  107 (307)
                      .||++++...+.+  ++++ +.+.|.|+++||+|||.++++|++|++.+.|..    +..+|.++|||++|+|+++|+++
T Consensus         2 ~~ka~~~~~~~~~--~~~~-~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~----~~~~p~i~G~e~~G~V~~vG~~v   74 (365)
T cd08277           2 KCKAAVAWEAGKP--LVIE-EIEVAPPKANEVRIKMLATSVCHTDILAIEGFK----ATLFPVILGHEGAGIVESVGEGV   74 (365)
T ss_pred             ccEEEEEccCCCC--cEEE-EEECCCCCCCEEEEEEEEEeechhhHHHhcCCC----CCCCCeecccceeEEEEeeCCCC
Confidence            5889999876543  7888 899999999999999999999999999998843    24578899999999999999999


Q ss_pred             CCCCCCCEEEEecCCC-------------------------------------------CCCCcceeEEEecCCceeeCC
Q 021831          108 RSLTVGQEVFGALHPT-------------------------------------------AVRGTYADYAVLSEDELTPKP  144 (307)
Q Consensus       108 ~~~~~Gd~V~~~~~~~-------------------------------------------~~~g~~~~~~~~~~~~~~~ip  144 (307)
                      +++++||+|++.....                                           ...|+|+||+.++.+.++++|
T Consensus        75 ~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP  154 (365)
T cd08277          75 TNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKID  154 (365)
T ss_pred             ccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECC
Confidence            9999999998752100                                           014789999999999999999


Q ss_pred             CCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCCceE
Q 021831          145 VSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGAEQA  222 (307)
Q Consensus       145 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v  222 (307)
                      +++++++++.+.+++.+||+++.....+++|++|||+| .|++|++++++|+.+|+ +|+++.+. ++.+.++++|++++
T Consensus       155 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~  233 (365)
T cd08277         155 PAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDF  233 (365)
T ss_pred             CCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcE
Confidence            99999999999999999999887788899999999998 59999999999999999 78888654 45677889999999


Q ss_pred             EeCCCh--hHHHHhc----CCccEEEECCCChhhHHHHHhcccCC-cEEEEeccCc
Q 021831          223 VDYSSK--DIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGET  271 (307)
Q Consensus       223 ~~~~~~--~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~  271 (307)
                      ++..+.  ++.+.+.    +++|++||++|+...+..++++++++ |+++.+|...
T Consensus       234 i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  289 (365)
T cd08277         234 INPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPP  289 (365)
T ss_pred             eccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCC
Confidence            887652  2233222    47999999999876889999999885 9999999753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=2.9e-34  Score=259.82  Aligned_cols=233  Identities=28%  Similarity=0.353  Sum_probs=197.5

Q ss_pred             eeEEEEcccCCC---ceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecC
Q 021831           29 CRAVVLPRFGGP---EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (307)
Q Consensus        29 ~ka~~~~~~~~~---~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~  105 (307)
                      ||+++++.++.+   +.++++ +.+.|.|+++||+|++.++++|++|++...|....  ...+|.++|||++|+|+++|+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~-~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~--~~~~p~v~G~e~~G~V~~vG~   77 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLP-EPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGS--TKALPVPPGFEGSGTVVAAGG   77 (324)
T ss_pred             CeEEEEeecCCCccccEEEec-ccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC--CCCCCcCCCcceEEEEEEECC
Confidence            689999988766   678998 89999999999999999999999999998885321  235688999999999999999


Q ss_pred             CCCC-CCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEE-cC
Q 021831          106 SVRS-LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVL-GG  183 (307)
Q Consensus       106 ~v~~-~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~-Ga  183 (307)
                      ++++ |++||+|++....   +|+|++|+.++.+.++++|+++++.+++.++..++|||..+. .... ++++++|+ ++
T Consensus        78 ~v~~~~~vGd~V~~~~~~---~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~-~~~~-~~~~vlv~~~g  152 (324)
T cd08291          78 GPLAQSLIGKRVAFLAGS---YGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLE-TARE-EGAKAVVHTAA  152 (324)
T ss_pred             CccccCCCCCEEEecCCC---CCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHHH-hhcc-CCCcEEEEccC
Confidence            9996 9999999886431   499999999999999999999999999988888999986553 5555 45566665 77


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhc
Q 021831          184 GGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNF  257 (307)
Q Consensus       184 ~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~  257 (307)
                      +|++|++++|+|+.+|++|++++++ ++.+.++++|+++++++...++.+.+.     .++|++||++|+. .....+.+
T Consensus       153 ~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~-~~~~~~~~  231 (324)
T cd08291         153 ASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGG-LTGQILLA  231 (324)
T ss_pred             ccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcH-HHHHHHHh
Confidence            8999999999999999999888654 456678899999999988766655443     3799999999988 66778999


Q ss_pred             ccCCcEEEEeccC
Q 021831          258 LKRGGHYMTLHGE  270 (307)
Q Consensus       258 l~~~G~~v~~g~~  270 (307)
                      ++++|+++.+|..
T Consensus       232 l~~~G~~v~~g~~  244 (324)
T cd08291         232 MPYGSTLYVYGYL  244 (324)
T ss_pred             hCCCCEEEEEEec
Confidence            9999999999864

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=2.8e-34  Score=265.95  Aligned_cols=233  Identities=21%  Similarity=0.252  Sum_probs=186.4

Q ss_pred             ceeEEEEcccCCCceeEEcCcccCCCCC-------CCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEE
Q 021831           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLK-------PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEV  100 (307)
Q Consensus        28 ~~ka~~~~~~~~~~~~~~~~~~~~p~~~-------~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V  100 (307)
                      -||++++..++   .++++ +.+.|+|+       ++||+|||.++|||++|++++.|..    ...+|.++|||++|+|
T Consensus         2 ~mka~v~~~~~---~~~~~-e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~----~~~~p~i~GhE~~G~V   73 (393)
T TIGR02819         2 GNRGVVYLGPG---KVEVQ-DIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRT----TAPTGLVLGHEITGEV   73 (393)
T ss_pred             CceEEEEecCC---ceeEE-eccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCC----CCCCCccccceeEEEE
Confidence            48999998544   58888 89888774       6899999999999999999998842    2356899999999999


Q ss_pred             EEecCCCCCCCCCCEEEEecCC-----------------------------C----CCCCcceeEEEecCC--ceeeCCC
Q 021831          101 AAVGASVRSLTVGQEVFGALHP-----------------------------T----AVRGTYADYAVLSED--ELTPKPV  145 (307)
Q Consensus       101 ~~~G~~v~~~~~Gd~V~~~~~~-----------------------------~----~~~g~~~~~~~~~~~--~~~~ip~  145 (307)
                      +++|++|++|++||||...+..                             .    ..+|+|+||+.++..  .++++|+
T Consensus        74 ~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~  153 (393)
T TIGR02819        74 IEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPD  153 (393)
T ss_pred             EEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCC
Confidence            9999999999999999763210                             0    135999999999964  6999999


Q ss_pred             CCCh----hhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eC-CccHHHHHHcCC
Q 021831          146 SVTH----ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CG-SKSIDRVLAAGA  219 (307)
Q Consensus       146 ~~~~----~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~-~~-~~~~~~~~~~g~  219 (307)
                      +++.    .+++.+..++.++|+++. ..++++|++|||.| .|++|++++|+|+.+|++++.+ .. .++.+.++++|+
T Consensus       154 ~~~~~~~~~~~a~l~~~~~ta~~a~~-~~~~~~g~~VlV~G-~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga  231 (393)
T TIGR02819       154 RDQALEKIRDLTMLSDIFPTGYHGAV-TAGVGPGSTVYIAG-AGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGC  231 (393)
T ss_pred             cccccccccceeeeccHHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCC
Confidence            8653    345677778999999986 67899999999977 5999999999999999965444 33 346677899999


Q ss_pred             ceEEeCCChhHHHHhc-----CCccEEEECCCCh--------------hhHHHHHhcccCCcEEEEeccC
Q 021831          220 EQAVDYSSKDIELAIK-----GKFDAVLDTIGAP--------------ETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       220 ~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~--------------~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      +.+......++.+.+.     .++|++||++|.+              ..+..++++++++|+++.+|.+
T Consensus       232 ~~v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~  301 (393)
T TIGR02819       232 ETVDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLY  301 (393)
T ss_pred             eEEecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeec
Confidence            7543333333333222     3799999999986              3789999999999999999986

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=5.7e-34  Score=256.17  Aligned_cols=228  Identities=20%  Similarity=0.247  Sum_probs=177.7

Q ss_pred             ceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecC-hhhHHHHhCCCccccCCCCCcccccceEEEEEEecCC
Q 021831           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSIN-PLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (307)
Q Consensus        28 ~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~-~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~  106 (307)
                      +||++++.   .++.++++ +.+.|+|+++||+|||.++||| ++|++++.|.........+|.++|||++|+|+++|++
T Consensus         1 ~~ka~~~~---~~~~l~~~-e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~   76 (308)
T TIGR01202         1 KTQAIVLS---GPNQIELR-EVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPD   76 (308)
T ss_pred             CceEEEEe---CCCeEEEE-EecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCC
Confidence            47899998   45568998 9999999999999999999995 7999988885432221357999999999999999999


Q ss_pred             CCCCCCCCEEEEecCC-----CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEE
Q 021831          107 VRSLTVGQEVFGALHP-----TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVL  181 (307)
Q Consensus       107 v~~~~~Gd~V~~~~~~-----~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~  181 (307)
                      + +|++||||+.....     ...+|+|+||+.++.+.++++|++++++. +.+. +..+||+++.. . ..++++++|+
T Consensus        77 v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~  151 (308)
T TIGR01202        77 T-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIV  151 (308)
T ss_pred             C-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEE
Confidence            8 59999999864211     01259999999999999999999999865 4443 57899999864 3 3468999999


Q ss_pred             cCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhHHHHHhcccCC
Q 021831          182 GGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRG  261 (307)
Q Consensus       182 Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~  261 (307)
                      | .|++|++++|+|+.+|++++.+.+... ++++..+..+++++.+.     ...++|++|||+|+...+..++++++++
T Consensus       152 G-~G~vG~~a~q~ak~~G~~~v~~~~~~~-~rl~~a~~~~~i~~~~~-----~~~g~Dvvid~~G~~~~~~~~~~~l~~~  224 (308)
T TIGR01202       152 G-HGTLGRLLARLTKAAGGSPPAVWETNP-RRRDGATGYEVLDPEKD-----PRRDYRAIYDASGDPSLIDTLVRRLAKG  224 (308)
T ss_pred             C-CCHHHHHHHHHHHHcCCceEEEeCCCH-HHHHhhhhccccChhhc-----cCCCCCEEEECCCCHHHHHHHHHhhhcC
Confidence            8 599999999999999997554443322 22222233345554321     1247999999999986789999999999


Q ss_pred             cEEEEeccCc
Q 021831          262 GHYMTLHGET  271 (307)
Q Consensus       262 G~~v~~g~~~  271 (307)
                      |+++++|...
T Consensus       225 G~iv~~G~~~  234 (308)
T TIGR01202       225 GEIVLAGFYT  234 (308)
T ss_pred             cEEEEEeecC
Confidence            9999999753

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=6.6e-34  Score=259.48  Aligned_cols=222  Identities=22%  Similarity=0.301  Sum_probs=184.2

Q ss_pred             CceeEEcCcccCCCCC-CCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCCCCCCCCEEEE
Q 021831           40 PEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFG  118 (307)
Q Consensus        40 ~~~~~~~~~~~~p~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~  118 (307)
                      ++.+++. +.+.|+|. ++||+|||.++|||+.|...............+|.++|||++|+|+++|+++++|++||+|++
T Consensus        20 ~~~~~~~-~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~   98 (345)
T cd08293          20 AENFRVE-ECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTS   98 (345)
T ss_pred             ccceEEE-eccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEe
Confidence            4788998 89999875 999999999999999986533321111112346789999999999999999999999999987


Q ss_pred             ecCCCCCCCcceeEEEecCCceeeCCCCCChhh----hccccchHHHHHHHHHHHcCCCCC--CEEEEEcCCchHHHHHH
Q 021831          119 ALHPTAVRGTYADYAVLSEDELTPKPVSVTHAD----ASAIPFAALTAWRALKCAARMSEG--QRLLVLGGGGAVGFAAV  192 (307)
Q Consensus       119 ~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~----aa~~~~~~~ta~~~l~~~~~~~~g--~~VlI~Ga~g~~G~~~~  192 (307)
                      +.      +.|+||++++.+.++++|+++++.+    ++.++.++.|||+++.+..++++|  ++|||+|++|++|++++
T Consensus        99 ~~------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~ai  172 (345)
T cd08293          99 FN------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAG  172 (345)
T ss_pred             cC------CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHH
Confidence            52      5799999999999999999864332    455677899999999878888877  99999999999999999


Q ss_pred             HHHHHcCC-EEEEEeCCcc-HHHHHH-cCCceEEeCCChhHHHHhc----CCccEEEECCCChhhHHHHHhcccCCcEEE
Q 021831          193 QFSVASGC-HVSATCGSKS-IDRVLA-AGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYM  265 (307)
Q Consensus       193 ~~a~~~G~-~Vi~~~~~~~-~~~~~~-~g~~~v~~~~~~~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v  265 (307)
                      |+|+.+|+ +|++++++++ .+.+++ +|+++++++.+.++.+.+.    +++|++||++|+. ....++++|+++|+++
T Consensus       173 qlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~~-~~~~~~~~l~~~G~iv  251 (345)
T cd08293         173 QIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGE-ISDTVISQMNENSHII  251 (345)
T ss_pred             HHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCcH-HHHHHHHHhccCCEEE
Confidence            99999999 8999976644 455655 9999999988776665543    4799999999998 6799999999999999


Q ss_pred             Eecc
Q 021831          266 TLHG  269 (307)
Q Consensus       266 ~~g~  269 (307)
                      .+|.
T Consensus       252 ~~G~  255 (345)
T cd08293         252 LCGQ  255 (345)
T ss_pred             EEee
Confidence            9984

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=1.3e-33  Score=255.07  Aligned_cols=233  Identities=30%  Similarity=0.404  Sum_probs=202.4

Q ss_pred             eeEEEEcccCCC-ceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCC
Q 021831           29 CRAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (307)
Q Consensus        29 ~ka~~~~~~~~~-~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v  107 (307)
                      ||+++++.++.+ +.+++. +.+.|.+.++||+|+|.++++|++|+..+.|....  ....|.++|||++|+|+++|+++
T Consensus         1 m~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~--~~~~p~~~G~e~~G~V~~~G~~v   77 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIG-EVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGY--KPELPAIGGSEAVGVVDAVGEGV   77 (324)
T ss_pred             CeeEEEccCCChhHeEEEe-ecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC--CCCCCCCCCcceEEEEEEeCCCC
Confidence            689999877665 468888 99999999999999999999999999988874321  22457899999999999999999


Q ss_pred             CCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchH
Q 021831          108 RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV  187 (307)
Q Consensus       108 ~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~  187 (307)
                      +++++||+|++...    .|+|++|+.++.+.++++|+++++++++.++..+.++|+++. ...+++|++|||+|++|.+
T Consensus        78 ~~~~~Gd~V~~~~~----~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~-~~~~~~g~~vlI~g~~g~i  152 (324)
T cd08292          78 KGLQVGQRVAVAPV----HGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLD-FLGVKPGQWLIQNAAGGAV  152 (324)
T ss_pred             CCCCCCCEEEeccC----CCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHH-hhCCCCCCEEEEcccccHH
Confidence            99999999998752    399999999999999999999999999999888999999985 6889999999999999999


Q ss_pred             HHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCC
Q 021831          188 GFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRG  261 (307)
Q Consensus       188 G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~  261 (307)
                      |++++++|+.+|++++.+++++ +...++++|.++++++.+.++.+.+.     .++|++||++|+. ....++++++++
T Consensus       153 g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~  231 (324)
T cd08292         153 GKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGK-LAGELLSLLGEG  231 (324)
T ss_pred             HHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCCh-hHHHHHHhhcCC
Confidence            9999999999999988886654 45556778999999887766655443     3799999999997 778999999999


Q ss_pred             cEEEEeccC
Q 021831          262 GHYMTLHGE  270 (307)
Q Consensus       262 G~~v~~g~~  270 (307)
                      |+++.+|..
T Consensus       232 g~~v~~g~~  240 (324)
T cd08292         232 GTLVSFGSM  240 (324)
T ss_pred             cEEEEEecC
Confidence            999999864

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=1e-33  Score=257.99  Aligned_cols=228  Identities=19%  Similarity=0.193  Sum_probs=179.6

Q ss_pred             ceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccc-cCCCCCcccccceEEEEEEecCC
Q 021831           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSI-FEPLLPLILGRDISGEVAAVGAS  106 (307)
Q Consensus        28 ~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~~~~p~~~G~e~~G~V~~~G~~  106 (307)
                      ..++++++   .+++++++ +.+.|+ +++||+|||.++|||++|++++.|...+. ....+|.++|||++|+|+++|.+
T Consensus         2 ~~~~~~~~---~~~~~~~~-~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~   76 (341)
T cd08237           2 INQVYRLV---RPKFFEVT-YEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG   76 (341)
T ss_pred             cccceEEe---ccceEEEe-ecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC
Confidence            35678887   45578998 899984 99999999999999999999999853221 12357999999999999998764


Q ss_pred             CCCCCCCCEEEEecCC--------------------CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHH
Q 021831          107 VRSLTVGQEVFGALHP--------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL  166 (307)
Q Consensus       107 v~~~~~Gd~V~~~~~~--------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l  166 (307)
                        .|++||||+.....                    ...+|+|+||+++|.+.++++|+++++++++.+ .++.++|+++
T Consensus        77 --~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~-~~~~~a~~a~  153 (341)
T cd08237          77 --TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFT-ELVSVGVHAI  153 (341)
T ss_pred             --ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhh-chHHHHHHHH
Confidence              79999999875321                    123599999999999999999999999887755 4888899988


Q ss_pred             HHH--cCCCCCCEEEEEcCCchHHHHHHHHHHH-cCC-EEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhcCCccEE
Q 021831          167 KCA--ARMSEGQRLLVLGGGGAVGFAAVQFSVA-SGC-HVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAV  241 (307)
Q Consensus       167 ~~~--~~~~~g~~VlI~Ga~g~~G~~~~~~a~~-~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvv  241 (307)
                      ...  ..+++|++|||.|+ |++|++++|+++. +|+ +|+++.++ ++++.+++.+.++.++    ++.+.  .++|+|
T Consensus       154 ~~~~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~----~~~~~--~g~d~v  226 (341)
T cd08237         154 SRFEQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID----DIPED--LAVDHA  226 (341)
T ss_pred             HHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh----hhhhc--cCCcEE
Confidence            643  35688999999995 9999999999986 664 88887554 4556677666543321    22221  269999


Q ss_pred             EECCCC---hhhHHHHHhcccCCcEEEEeccC
Q 021831          242 LDTIGA---PETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       242 id~~g~---~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ||++|+   ...+..++++++++|+++.+|..
T Consensus       227 iD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~  258 (341)
T cd08237         227 FECVGGRGSQSAINQIIDYIRPQGTIGLMGVS  258 (341)
T ss_pred             EECCCCCccHHHHHHHHHhCcCCcEEEEEeec
Confidence            999994   45789999999999999999964

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=4.8e-33  Score=251.95  Aligned_cols=224  Identities=21%  Similarity=0.321  Sum_probs=190.9

Q ss_pred             ceeEEEEccc--CCC--ceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEe
Q 021831           28 SCRAVVLPRF--GGP--EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAV  103 (307)
Q Consensus        28 ~~ka~~~~~~--~~~--~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~  103 (307)
                      +||+|++..+  +++  +.++++ +.+.|+|+++||+|||.+++||+.|.....+      ....|.++|+|++|+|++ 
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~-~~~~p~~~~~evlVkv~a~~in~~~~~~~~~------~~~~p~v~G~e~~G~V~~-   73 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELV-EEELPPLKDGEVLCEALFLSVDPYMRPYSKR------LNEGDTMIGTQVAKVIES-   73 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEE-ecCCCCCCCCcEEEEEEEEecCHHHhccccc------CCCCCcEecceEEEEEec-
Confidence            5899999983  444  789999 9999999999999999999999987652111      124588999999999985 


Q ss_pred             cCCCCCCCCCCEEEEecCCCCCCCcceeEEEecCC---ceeeCCCCCCh-----hhhccccchHHHHHHHHHHHcCCCCC
Q 021831          104 GASVRSLTVGQEVFGALHPTAVRGTYADYAVLSED---ELTPKPVSVTH-----ADASAIPFAALTAWRALKCAARMSEG  175 (307)
Q Consensus       104 G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~---~~~~ip~~~~~-----~~aa~~~~~~~ta~~~l~~~~~~~~g  175 (307)
                        .+++|++||+|++.       ++|++|+.++.+   .++++|+++++     ...+.++.+++|||+++....++++|
T Consensus        74 --~~~~~~~Gd~V~~~-------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g  144 (329)
T cd08294          74 --KNSKFPVGTIVVAS-------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAG  144 (329)
T ss_pred             --CCCCCCCCCEEEee-------CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCC
Confidence              45679999999875       679999999999   99999999882     33346778999999999878899999


Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc----CCccEEEECCCChhh
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPET  250 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~----~~~dvvid~~g~~~~  250 (307)
                      ++|||+|++|++|++++|+|+.+|++|++++++ ++.+.++++|+++++++.+.++.+.+.    +++|++||++|+. .
T Consensus       145 ~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g~~-~  223 (329)
T cd08294         145 ETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNVGGE-F  223 (329)
T ss_pred             CEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCCCCcEEEEECCCHH-H
Confidence            999999999999999999999999999988765 456778889999999998777665543    4799999999996 8


Q ss_pred             HHHHHhcccCCcEEEEecc
Q 021831          251 ERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~  269 (307)
                      +..++++++++|+++.+|.
T Consensus       224 ~~~~~~~l~~~G~iv~~g~  242 (329)
T cd08294         224 SSTVLSHMNDFGRVAVCGS  242 (329)
T ss_pred             HHHHHHhhccCCEEEEEcc
Confidence            8999999999999999985

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=8.3e-33  Score=251.18  Aligned_cols=235  Identities=28%  Similarity=0.429  Sum_probs=201.7

Q ss_pred             eEEEEccc---CCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCC
Q 021831           30 RAVVLPRF---GGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (307)
Q Consensus        30 ka~~~~~~---~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~  106 (307)
                      |||++..+   ++++.++.. +.|.|+|+++||+|+|.++++|++|+....|...   ...+|.++|+|++|+|+++|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~---~~~~~~~~g~e~~G~V~~vG~~   76 (336)
T TIGR02817         1 KAVGYKKPLPITDPDALVDI-DLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAP---EAGQPKILGWDAAGVVVAVGDE   76 (336)
T ss_pred             CceeeccccCCCCcccceec-ccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCC---CCCCCcccceeeEEEEEEeCCC
Confidence            57888887   777889998 8999999999999999999999999998887422   2346788999999999999999


Q ss_pred             CCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCC-----CCEEEEE
Q 021831          107 VRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE-----GQRLLVL  181 (307)
Q Consensus       107 v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----g~~VlI~  181 (307)
                      ++.|++||+|++.... ...|+|++|+.++.+.++++|+++++++++.+++++.|||+++....++++     |++|||+
T Consensus        77 v~~~~~Gd~V~~~~~~-~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~  155 (336)
T TIGR02817        77 VTLFKPGDEVWYAGDI-DRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLII  155 (336)
T ss_pred             CCCCCCCCEEEEcCCC-CCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEE
Confidence            9999999999886411 123899999999999999999999999999999999999999977888877     9999999


Q ss_pred             cCCchHHHHHHHHHHHc-CCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhc----CCccEEEECCCChhhHHHHH
Q 021831          182 GGGGAVGFAAVQFSVAS-GCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGL  255 (307)
Q Consensus       182 Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~----~~~dvvid~~g~~~~~~~~~  255 (307)
                      |++|.+|++++|+|+.+ |++|+++++++ +.+.++++|+++++++.. ++.+.+.    +++|+++|++++......++
T Consensus       156 ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~  234 (336)
T TIGR02817       156 GGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSK-PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIV  234 (336)
T ss_pred             cCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCC-CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHH
Confidence            99999999999999998 99999996654 556688899999998654 3433332    47999999987655889999


Q ss_pred             hcccCCcEEEEeccC
Q 021831          256 NFLKRGGHYMTLHGE  270 (307)
Q Consensus       256 ~~l~~~G~~v~~g~~  270 (307)
                      ++++++|+++.++..
T Consensus       235 ~~l~~~G~~v~~~~~  249 (336)
T TIGR02817       235 ELLAPQGRFALIDDP  249 (336)
T ss_pred             HHhccCCEEEEEccc
Confidence            999999999998754

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=1.3e-32  Score=251.77  Aligned_cols=236  Identities=23%  Similarity=0.301  Sum_probs=196.7

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccc--------cCCCCCcccccceEEEE
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSI--------FEPLLPLILGRDISGEV  100 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~--------~~~~~p~~~G~e~~G~V  100 (307)
                      ||++++..+   +.++++ +.+.|+|+++||+||+.++++|++|+....+.....        ....+|.++|||++|+|
T Consensus         1 mka~~~~~~---~~l~~~-~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V   76 (351)
T cd08233           1 MKAARYHGR---KDIRVE-EVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVV   76 (351)
T ss_pred             CceEEEecC---CceEEE-eccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEE
Confidence            789999854   458888 899999999999999999999999998765421100        11236889999999999


Q ss_pred             EEecCCCCCCCCCCEEEEecCC-----------------------C-CCCCcceeEEEecCCceeeCCCCCChhhhcccc
Q 021831          101 AAVGASVRSLTVGQEVFGALHP-----------------------T-AVRGTYADYAVLSEDELTPKPVSVTHADASAIP  156 (307)
Q Consensus       101 ~~~G~~v~~~~~Gd~V~~~~~~-----------------------~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~  156 (307)
                      +++|++++++++||+|++....                       . ..+|+|++|+.++.+.++++|+++++++++.+ 
T Consensus        77 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-  155 (351)
T cd08233          77 VEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV-  155 (351)
T ss_pred             EEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-
Confidence            9999999999999999874221                       0 11589999999999999999999999988766 


Q ss_pred             chHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHh
Q 021831          157 FAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAI  234 (307)
Q Consensus       157 ~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~  234 (307)
                      .++.+||+++ ...++++|++|+|+|+ |.+|++++|+|+.+|+ +|+++.++ ++.+.++++|++.++++.+.++.+.+
T Consensus       156 ~~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~l  233 (351)
T cd08233         156 EPLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAEV  233 (351)
T ss_pred             cHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCccCHHHHH
Confidence            6788999999 5888999999999985 9999999999999999 78888554 45566788999999998876665554


Q ss_pred             c-----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          235 K-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       235 ~-----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .     +++|++||++|....+..++++++++|+++.+|...
T Consensus       234 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  275 (351)
T cd08233         234 RKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWE  275 (351)
T ss_pred             HHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCC
Confidence            3     359999999997668899999999999999999754

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-33  Score=252.70  Aligned_cols=232  Identities=24%  Similarity=0.371  Sum_probs=189.0

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCC-CCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v  107 (307)
                      ||+++++.++   .+++. +.+.|+| .++||+|||.++++|++|+..+.+..    ...+|.++|||++|+|+++|+++
T Consensus         1 Mka~~~~~~~---~~~~~-~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~----~~~~p~i~G~e~~G~V~~vG~~v   72 (347)
T PRK10309          1 MKSVVNDTDG---IVRVA-ESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG----AHYYPITLGHEFSGYVEAVGSGV   72 (347)
T ss_pred             CceEEEeCCC---ceEEE-ECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC----CCCCCcccccceEEEEEEeCCCC
Confidence            6899998643   58888 8999987 58999999999999999997543211    11357899999999999999999


Q ss_pred             CCCCCCCEEEEecCC-----------------------CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHH
Q 021831          108 RSLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (307)
Q Consensus       108 ~~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (307)
                      ++|++||+|++....                       ...+|+|+||+.++.+.++++|+++++++++.+. ++.++|+
T Consensus        73 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~  151 (347)
T PRK10309         73 DDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLH  151 (347)
T ss_pred             CCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHH
Confidence            999999999875321                       1125999999999999999999999999988764 4566788


Q ss_pred             HHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCC-ccHHHHHHcCCceEEeCCChhHH---HHhc-CCc
Q 021831          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGS-KSIDRVLAAGAEQAVDYSSKDIE---LAIK-GKF  238 (307)
Q Consensus       165 ~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~-Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~---~~~~-~~~  238 (307)
                      ++. ...+++|++|||+| .|++|++++|+|+.+|++ |+++.++ ++.+.++++|+++++++.+.+..   +... .++
T Consensus       152 ~~~-~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~  229 (347)
T PRK10309        152 AFH-LAQGCEGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLRELRF  229 (347)
T ss_pred             HHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCCCC
Confidence            764 67889999999998 599999999999999996 6777544 45667889999999987654422   2222 368


Q ss_pred             c-EEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          239 D-AVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       239 d-vvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      | ++|||+|+...+..++++++++|+++.+|...
T Consensus       230 d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~  263 (347)
T PRK10309        230 DQLILETAGVPQTVELAIEIAGPRAQLALVGTLH  263 (347)
T ss_pred             CeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCC
Confidence            8 99999999778899999999999999999653

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.2e-32  Score=249.80  Aligned_cols=240  Identities=31%  Similarity=0.431  Sum_probs=200.5

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCcc-----------------ccCCCCCcc
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRS-----------------IFEPLLPLI   91 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-----------------~~~~~~p~~   91 (307)
                      ||++.+..++.++.+.+.++.+.|.|.+++|+|||.++++|++|+.+..|....                 .....+|.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~   80 (350)
T cd08274           1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI   80 (350)
T ss_pred             CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence            688888877766677777345777889999999999999999999988774321                 012456889


Q ss_pred             cccceEEEEEEecCCCCCCCCCCEEEEecC---------------CCCCCCcceeEEEecCCceeeCCCCCChhhhcccc
Q 021831           92 LGRDISGEVAAVGASVRSLTVGQEVFGALH---------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIP  156 (307)
Q Consensus        92 ~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~---------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~  156 (307)
                      +|||++|+|+++|+++++|++||+|++.+.               ....+|+|++|+.++.+.++++|+++++.+++.+.
T Consensus        81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~  160 (350)
T cd08274          81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFP  160 (350)
T ss_pred             cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhcc
Confidence            999999999999999999999999988531               11235899999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHH--Hh
Q 021831          157 FAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL--AI  234 (307)
Q Consensus       157 ~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~--~~  234 (307)
                      +++.++|+++ ....+++|++|||+|++|.+|++++++|+.+|++++.++++++.+.++++|++.+.+.....+.+  ..
T Consensus       161 ~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  239 (350)
T cd08274         161 CSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAAKEEAVRALGADTVILRDAPLLADAKAL  239 (350)
T ss_pred             cHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCchhhHHHHhcCCeEEEeCCCccHHHHHhh
Confidence            9999999998 57889999999999998999999999999999999888776666778889987766655443332  11


Q ss_pred             c-CCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          235 K-GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       235 ~-~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      . .++|++||++|+. ....++++++++|+++.+|..
T Consensus       240 ~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~  275 (350)
T cd08274         240 GGEPVDVVADVVGGP-LFPDLLRLLRPGGRYVTAGAI  275 (350)
T ss_pred             CCCCCcEEEecCCHH-HHHHHHHHhccCCEEEEeccc
Confidence            1 4799999999987 889999999999999999854

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=1.3e-32  Score=249.15  Aligned_cols=215  Identities=21%  Similarity=0.323  Sum_probs=182.2

Q ss_pred             CCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCCCCCCCCEEE
Q 021831           38 GGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVF  117 (307)
Q Consensus        38 ~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~  117 (307)
                      ..++.+++. +.+.|+|++|||+|||.++++|+.|+.   |.+.   ....|.++|.|++|+|++.|+   +|++||+|+
T Consensus        14 ~~~~~l~~~-~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~---~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~   83 (325)
T TIGR02825        14 PTDSDFELK-TVELPPLNNGEVLLEALFLSVDPYMRV---AAKR---LKEGDTMMGQQVARVVESKNV---ALPKGTIVL   83 (325)
T ss_pred             CCCCceEEE-eccCCCCCCCcEEEEEEEEecCHHHhc---ccCc---CCCCCcEecceEEEEEEeCCC---CCCCCCEEE
Confidence            345789999 899999999999999999999997553   4221   123477999999999999774   599999998


Q ss_pred             EecCCCCCCCcceeEEEecCCceeeC----CCCCChhhh-ccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHH
Q 021831          118 GALHPTAVRGTYADYAVLSEDELTPK----PVSVTHADA-SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAV  192 (307)
Q Consensus       118 ~~~~~~~~~g~~~~~~~~~~~~~~~i----p~~~~~~~a-a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~  192 (307)
                      +.       ++|++|+.++.+.+.++    |++++++++ +++++++.|||+++....++++|++|||+|++|++|++++
T Consensus        84 ~~-------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~ai  156 (325)
T TIGR02825        84 AS-------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVG  156 (325)
T ss_pred             Ee-------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHH
Confidence            75       56999999998887777    899999987 6788999999999877899999999999999999999999


Q ss_pred             HHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCCh-hHHHHhc----CCccEEEECCCChhhHHHHHhcccCCcEEEE
Q 021831          193 QFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSK-DIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMT  266 (307)
Q Consensus       193 ~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~-~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~  266 (307)
                      |+|+.+|++|++++++ ++.+.++++|+++++++.+. ++.+.+.    +++|++||++|+. ....++++++++|+++.
T Consensus       157 qlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~-~~~~~~~~l~~~G~iv~  235 (325)
T TIGR02825       157 QIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGE-FSNTVIGQMKKFGRIAI  235 (325)
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHH-HHHHHHHHhCcCcEEEE
Confidence            9999999999988665 45677889999999998763 4443332    4799999999987 77999999999999999


Q ss_pred             eccC
Q 021831          267 LHGE  270 (307)
Q Consensus       267 ~g~~  270 (307)
                      +|..
T Consensus       236 ~G~~  239 (325)
T TIGR02825       236 CGAI  239 (325)
T ss_pred             ecch
Confidence            9853

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-32  Score=249.03  Aligned_cols=234  Identities=20%  Similarity=0.319  Sum_probs=190.8

Q ss_pred             cceeEEEEccc--CC--CceeEEcCc--ccCC-CCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCccccc--ceE
Q 021831           27 TSCRAVVLPRF--GG--PEVLEVRPN--VEVP-DLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGR--DIS   97 (307)
Q Consensus        27 ~~~ka~~~~~~--~~--~~~~~~~~~--~~~p-~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~--e~~   97 (307)
                      .++|+|.+.++  +.  +++|++.+.  .+.| ++++|||||||.++++|+.|...+.++..   ....|+++|+  |++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~---~~~~p~~~G~~~~~~   83 (348)
T PLN03154          7 VENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD---SYLPPFVPGQRIEGF   83 (348)
T ss_pred             ccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC---CCCCCcCCCCeeEee
Confidence            34688888654  22  367888832  3555 45799999999999999998875544221   1235788998  889


Q ss_pred             EEEEEecCCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCc--e--eeCCCCCChh-hhccccchHHHHHHHHHHHcCC
Q 021831           98 GEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDE--L--TPKPVSVTHA-DASAIPFAALTAWRALKCAARM  172 (307)
Q Consensus        98 G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~--~--~~ip~~~~~~-~aa~~~~~~~ta~~~l~~~~~~  172 (307)
                      |+|..+|+++++|++||+|+++       ++|+||..++.+.  +  +++|+++++. +++.++++++|||+++.....+
T Consensus        84 G~v~~vg~~v~~~~~Gd~V~~~-------~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~  156 (348)
T PLN03154         84 GVSKVVDSDDPNFKPGDLISGI-------TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSP  156 (348)
T ss_pred             EEEEEEecCCCCCCCCCEEEec-------CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCC
Confidence            9999999999999999999875       7899999999753  5  4459999986 6888899999999999878899


Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHH-HcCCceEEeCCCh-hHHHHhc----CCccEEEECC
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVL-AAGAEQAVDYSSK-DIELAIK----GKFDAVLDTI  245 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~-~~g~~~v~~~~~~-~~~~~~~----~~~dvvid~~  245 (307)
                      ++|++|||+|++|++|++++|+|+.+|++|+++++++ +.+.++ ++|+++++++.+. ++.+.+.    +++|++||++
T Consensus       157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~v  236 (348)
T PLN03154        157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNV  236 (348)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECC
Confidence            9999999999999999999999999999999886654 455566 7999999998753 5554433    4799999999


Q ss_pred             CChhhHHHHHhcccCCcEEEEeccCc
Q 021831          246 GAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       246 g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      |+. .+..++++++++|+++++|...
T Consensus       237 G~~-~~~~~~~~l~~~G~iv~~G~~~  261 (348)
T PLN03154        237 GGD-MLDAALLNMKIHGRIAVCGMVS  261 (348)
T ss_pred             CHH-HHHHHHHHhccCCEEEEECccc
Confidence            987 8899999999999999999654

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=1.4e-32  Score=250.26  Aligned_cols=230  Identities=23%  Similarity=0.315  Sum_probs=189.4

Q ss_pred             eeEEEEcccCCCceeEEcCcccC----CCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccce--EEEEEE
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEV----PDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDI--SGEVAA  102 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~----p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~--~G~V~~  102 (307)
                      +|+|....+ .++.|++. +.++    |+|+++||||||.+++||+.|+....|....  ....|+++|+++  .|++..
T Consensus         8 ~~~~~~~~~-~~~~~~~~-~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~--~~~~p~~~g~~~~g~~~~~~   83 (338)
T cd08295           8 LKAYVTGFP-KESDLELR-TTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS--LYLPPFKPGEVITGYGVAKV   83 (338)
T ss_pred             EecCCCCCC-CccceEEE-EecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCcc--ccCCCcCCCCeEeccEEEEE
Confidence            455553222 24679998 8877    8899999999999999999999998884321  124577889755  456666


Q ss_pred             ecCCCCCCCCCCEEEEecCCCCCCCcceeEEEecC-CceeeCC-CCCChh-hhccccchHHHHHHHHHHHcCCCCCCEEE
Q 021831          103 VGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSE-DELTPKP-VSVTHA-DASAIPFAALTAWRALKCAARMSEGQRLL  179 (307)
Q Consensus       103 ~G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~-~~~~~ip-~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~Vl  179 (307)
                      +|+++++|++||+|+++       |+|+||++++. ..++++| +++++. +++.+++++.|||+++.+..++++|++||
T Consensus        84 v~~~v~~~~vGd~V~~~-------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~Vl  156 (338)
T cd08295          84 VDSGNPDFKVGDLVWGF-------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVF  156 (338)
T ss_pred             EecCCCCCCCCCEEEec-------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEE
Confidence            88989999999999865       78999999999 7999995 678876 78889999999999998788999999999


Q ss_pred             EEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHH-cCCceEEeCCC-hhHHHHhc----CCccEEEECCCChhhHH
Q 021831          180 VLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLA-AGAEQAVDYSS-KDIELAIK----GKFDAVLDTIGAPETER  252 (307)
Q Consensus       180 I~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~-~g~~~v~~~~~-~~~~~~~~----~~~dvvid~~g~~~~~~  252 (307)
                      |+|++|++|++++|+|+.+|++|++++++ ++.+.+++ +|+++++++.. .++.+.+.    +++|++||++|+. .+.
T Consensus       157 I~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~-~~~  235 (338)
T cd08295         157 VSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGK-MLD  235 (338)
T ss_pred             EecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHH-HHH
Confidence            99999999999999999999999988665 44566777 99999999764 35554433    4799999999986 889


Q ss_pred             HHHhcccCCcEEEEeccC
Q 021831          253 LGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       253 ~~~~~l~~~G~~v~~g~~  270 (307)
                      .++++++++|+++.+|..
T Consensus       236 ~~~~~l~~~G~iv~~G~~  253 (338)
T cd08295         236 AVLLNMNLHGRIAACGMI  253 (338)
T ss_pred             HHHHHhccCcEEEEeccc
Confidence            999999999999999854

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=1.9e-32  Score=250.54  Aligned_cols=232  Identities=23%  Similarity=0.328  Sum_probs=192.1

Q ss_pred             EEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCCCCC
Q 021831           32 VVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLT  111 (307)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~  111 (307)
                      +++++++.+  ++++ +.|.|.|+++||+|||.++|+|++|++.+.+..  .....+|.++|||++|+|+++|++++.+ 
T Consensus         2 ~~~~~~g~~--~~~~-~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~--~~~~~~p~i~GhE~~G~V~~vG~~v~~~-   75 (349)
T TIGR03201         2 WMMTEPGKP--MVKT-RVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGV--RTNHALPLALGHEISGRVIQAGAGAASW-   75 (349)
T ss_pred             ceEecCCCC--ceEE-eccCCCCCCCeEEEEEEEEeecccchHHHcCCC--CccCCCCeeccccceEEEEEeCCCcCCC-
Confidence            456655543  7888 899999999999999999999999999874421  1123568899999999999999999887 


Q ss_pred             CCCEEEEecC-----------------------CCCCCCcceeEEEecCCceeeCCC------CCChhhhccccchHHHH
Q 021831          112 VGQEVFGALH-----------------------PTAVRGTYADYAVLSEDELTPKPV------SVTHADASAIPFAALTA  162 (307)
Q Consensus       112 ~Gd~V~~~~~-----------------------~~~~~g~~~~~~~~~~~~~~~ip~------~~~~~~aa~~~~~~~ta  162 (307)
                      +||+|+....                       +...+|+|+||+.++.+.++++|+      ++++++++.+..++.++
T Consensus        76 ~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta  155 (349)
T TIGR03201        76 IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTP  155 (349)
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHH
Confidence            9999986321                       111359999999999999999999      89999999998999999


Q ss_pred             HHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CccHHHHHHcCCceEEeCCCh---hHHHHhc---
Q 021831          163 WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSIDRVLAAGAEQAVDYSSK---DIELAIK---  235 (307)
Q Consensus       163 ~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~---~~~~~~~---  235 (307)
                      |+++. ...+++|++|+|+|+ |++|++++++|+.+|++|+++.+ .++.+.++++|+++++++.+.   ++.+.+.   
T Consensus       156 ~~a~~-~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t  233 (349)
T TIGR03201       156 YQAAV-QAGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFA  233 (349)
T ss_pred             HHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhc
Confidence            99987 578899999999998 99999999999999999888855 456677899999999987653   3433332   


Q ss_pred             --CCcc----EEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          236 --GKFD----AVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       236 --~~~d----vvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                        .++|    ++|||+|+......++++++++|+++.+|.+.
T Consensus       234 ~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~  275 (349)
T TIGR03201       234 KARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTM  275 (349)
T ss_pred             ccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCC
Confidence              2565    89999999877888999999999999999764

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=4.7e-32  Score=248.92  Aligned_cols=234  Identities=30%  Similarity=0.447  Sum_probs=196.9

Q ss_pred             eEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCCC
Q 021831           30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS  109 (307)
Q Consensus        30 ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~  109 (307)
                      |+++++.+++  .++++ +.+.|.|+++||+|+|.++++|++|+....|....   ..+|.++|||++|+|+++|++++.
T Consensus         2 ka~~~~~~~~--~l~~~-~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~   75 (361)
T cd08231           2 RAAVLTGPGK--PLEIR-EVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR---VPLPIILGHEGVGRVVALGGGVTT   75 (361)
T ss_pred             eEEEEcCCCC--CCEEE-eccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC---CCCCcccccCCceEEEEeCCCccc
Confidence            7889997663  58888 89999999999999999999999999998884321   457889999999999999999986


Q ss_pred             ------CCCCCEEEEecCC------------------------------CCCCCcceeEEEecCC-ceeeCCCCCChhhh
Q 021831          110 ------LTVGQEVFGALHP------------------------------TAVRGTYADYAVLSED-ELTPKPVSVTHADA  152 (307)
Q Consensus       110 ------~~~Gd~V~~~~~~------------------------------~~~~g~~~~~~~~~~~-~~~~ip~~~~~~~a  152 (307)
                            |++||+|+.....                              ....|+|++|+.++.+ .++++|+++++.++
T Consensus        76 ~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~a  155 (361)
T cd08231          76 DVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVA  155 (361)
T ss_pred             cccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHH
Confidence                  9999999886321                              0125899999999986 79999999999999


Q ss_pred             ccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCc-cHHHHHHcCCceEEeCCChhH
Q 021831          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSK-SIDRVLAAGAEQAVDYSSKDI  230 (307)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~  230 (307)
                      +.++++++|||+++......++|++|||+| +|.+|++++++|+.+|+ +|+++.+++ +...++++|+++++++...+.
T Consensus       156 a~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~  234 (361)
T cd08231         156 APANCALATVLAALDRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPD  234 (361)
T ss_pred             HHhcCHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCccccc
Confidence            988899999999998666677999999998 59999999999999999 898886554 456678899998888765332


Q ss_pred             H---HHhc-----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          231 E---LAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       231 ~---~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      .   +.+.     .++|++||++|+...+..++++++++|+++.+|..
T Consensus       235 ~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  282 (361)
T cd08231         235 PQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSV  282 (361)
T ss_pred             HHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCC
Confidence            1   2221     37999999999866788999999999999999865

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=2.5e-32  Score=251.12  Aligned_cols=236  Identities=28%  Similarity=0.388  Sum_probs=200.5

Q ss_pred             cceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCC
Q 021831           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (307)
Q Consensus        27 ~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~  106 (307)
                      ++|||+++..++.+  ++++ +.+.|.+.++||+||+.++++|++|+....|..    +..+|.++|||++|+|+++|++
T Consensus         1 ~~~~a~~~~~~~~~--~~~~-~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~----~~~~p~v~G~e~~G~V~~vG~~   73 (365)
T cd08278           1 MKTTAAVVREPGGP--FVLE-DVELDDPRPDEVLVRIVATGICHTDLVVRDGGL----PTPLPAVLGHEGAGVVEAVGSA   73 (365)
T ss_pred             CccEEeeeccCCCc--ceEE-EeecCCCCCCeEEEEEEEeecCcccHHHhcCCC----CCCCCcccccceeEEEEEeCCC
Confidence            47899999976544  7777 888899999999999999999999999988843    2346789999999999999999


Q ss_pred             CCCCCCCCEEEEecCC---------------------------------------------CCCCCcceeEEEecCCcee
Q 021831          107 VRSLTVGQEVFGALHP---------------------------------------------TAVRGTYADYAVLSEDELT  141 (307)
Q Consensus       107 v~~~~~Gd~V~~~~~~---------------------------------------------~~~~g~~~~~~~~~~~~~~  141 (307)
                      +.++++||+|++....                                             ....|+|++|+.++.++++
T Consensus        74 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~  153 (365)
T cd08278          74 VTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVV  153 (365)
T ss_pred             cccCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEE
Confidence            9999999999853110                                             0013889999999999999


Q ss_pred             eCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCC
Q 021831          142 PKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGA  219 (307)
Q Consensus       142 ~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~  219 (307)
                      ++|+++++++++.+.+++.+||+++.....+++|++|||+| .|.+|++++++|+.+|+ +++++.++ ++.+.++++|+
T Consensus       154 ~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g-~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~  232 (365)
T cd08278         154 KVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFG-AGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGA  232 (365)
T ss_pred             ECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCC
Confidence            99999999999999999999999987788899999999997 59999999999999999 57777554 44566788999


Q ss_pred             ceEEeCCChhHHHHhc----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          220 EQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       220 ~~v~~~~~~~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ++++++...++.+.+.    +++|+++|++|....+..++++++++|+++.+|..
T Consensus       233 ~~~i~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~  287 (365)
T cd08278         233 THVINPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAP  287 (365)
T ss_pred             cEEecCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcC
Confidence            9999887655544332    47999999999866889999999999999999965

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=2.8e-32  Score=248.33  Aligned_cols=237  Identities=29%  Similarity=0.388  Sum_probs=202.3

Q ss_pred             eeEEEEcccCCC-ceeEEcCcccCCCCCC-CeEEEEEeeeecChhhHHHHhCCCccccC--CCCCcccccceEEEEEEec
Q 021831           29 CRAVVLPRFGGP-EVLEVRPNVEVPDLKP-NEVLVRTRAVSINPLDTRMRSGYGRSIFE--PLLPLILGRDISGEVAAVG  104 (307)
Q Consensus        29 ~ka~~~~~~~~~-~~~~~~~~~~~p~~~~-~eVlV~v~~~~i~~~D~~~~~g~~~~~~~--~~~p~~~G~e~~G~V~~~G  104 (307)
                      ||+|.++.++.+ +.+.++ +.+.|+|.+ ++|+||+.++|+|++|+....|..+....  ...|.++|||++|+|+++|
T Consensus         1 ~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG   79 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLE-SYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVG   79 (341)
T ss_pred             CceEEEccCCCchhheEEe-ecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeC
Confidence            799999988765 468888 889988887 99999999999999999988884321111  1257789999999999999


Q ss_pred             CCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCC
Q 021831          105 ASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGG  184 (307)
Q Consensus       105 ~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~  184 (307)
                      ++++.+++||+|++...   ..|+|++|+.++.+.++++|+++++++++.+++.+.++|+++.....+++|++|||+|++
T Consensus        80 ~~v~~~~~Gd~V~~~~~---~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~  156 (341)
T cd08290          80 SGVKSLKPGDWVIPLRP---GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGAN  156 (341)
T ss_pred             CCCCCCCCCCEEEecCC---CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccch
Confidence            99999999999988753   138999999999999999999999999999999999999999877889999999999999


Q ss_pred             chHHHHHHHHHHHcCCEEEEEeCCc-----cHHHHHHcCCceEEeCCCh---hHHHHhc----CCccEEEECCCChhhHH
Q 021831          185 GAVGFAAVQFSVASGCHVSATCGSK-----SIDRVLAAGAEQAVDYSSK---DIELAIK----GKFDAVLDTIGAPETER  252 (307)
Q Consensus       185 g~~G~~~~~~a~~~G~~Vi~~~~~~-----~~~~~~~~g~~~v~~~~~~---~~~~~~~----~~~dvvid~~g~~~~~~  252 (307)
                      |.+|++++++|+.+|++++++++++     +.+.++++|+++++++...   ++.+.+.    +++|++||++|+. ...
T Consensus       157 g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~-~~~  235 (341)
T cd08290         157 SAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGK-SAT  235 (341)
T ss_pred             hHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCcH-hHH
Confidence            9999999999999999998887653     3566788999999987764   4444433    2699999999998 677


Q ss_pred             HHHhcccCCcEEEEeccC
Q 021831          253 LGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       253 ~~~~~l~~~G~~v~~g~~  270 (307)
                      .++++++++|+++.+|..
T Consensus       236 ~~~~~l~~~G~~v~~g~~  253 (341)
T cd08290         236 ELARLLSPGGTMVTYGGM  253 (341)
T ss_pred             HHHHHhCCCCEEEEEecc
Confidence            889999999999999853

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=2.6e-32  Score=248.60  Aligned_cols=237  Identities=34%  Similarity=0.515  Sum_probs=205.1

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||+++++.++ +..++++ +.+.|.|+++||+|++.++++|++|+....+..    ....|.++|||++|+|+.+|++++
T Consensus         1 m~a~~~~~~~-~~~~~~~-~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~   74 (339)
T cd08249           1 QKAAVLTGPG-GGLLVVV-DVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF----IPSYPAILGCDFAGTVVEVGSGVT   74 (339)
T ss_pred             CceEEeccCC-CCccccc-CCCCCCCCCCEEEEEEEEEEcCchheeeeeccc----ccCCCceeeeeeeEEEEEeCCCcC
Confidence            7899999887 7789999 999999999999999999999999998765521    123567899999999999999999


Q ss_pred             CCCCCCEEEEecCC----CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCC----------CC
Q 021831          109 SLTVGQEVFGALHP----TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARM----------SE  174 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~----~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~----------~~  174 (307)
                      .+++||+|+++...    ...+|+|++|+.++.+.++++|+++++.+++.+++++.++|+++.....+          ++
T Consensus        75 ~~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~  154 (339)
T cd08249          75 RFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASK  154 (339)
T ss_pred             cCCCCCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCC
Confidence            99999999987531    11248999999999999999999999999999999999999998766544          78


Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhc----CCccEEEECCCChhh
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPET  250 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~----~~~dvvid~~g~~~~  250 (307)
                      +++|+|+|++|.+|++++++++.+|++|+.++++++.+.++++|+++++++...++.+.+.    +++|++||++|+...
T Consensus       155 ~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~~~~  234 (339)
T cd08249         155 GKPVLIWGGSSSVGTLAIQLAKLAGYKVITTASPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPES  234 (339)
T ss_pred             CCEEEEEcChhHHHHHHHHHHHHcCCeEEEEECcccHHHHHhcCCCEEEECCCchHHHHHHHhcCCCeeEEEEeeccchH
Confidence            9999999999999999999999999999888776777778899999999987766555443    479999999998448


Q ss_pred             HHHHHhcccC--CcEEEEeccCc
Q 021831          251 ERLGLNFLKR--GGHYMTLHGET  271 (307)
Q Consensus       251 ~~~~~~~l~~--~G~~v~~g~~~  271 (307)
                      +..+++++++  +|+++.+|...
T Consensus       235 ~~~~~~~l~~~~~g~~v~~g~~~  257 (339)
T cd08249         235 AQLCAEALGRSGGGKLVSLLPVP  257 (339)
T ss_pred             HHHHHHHHhccCCCEEEEecCCC
Confidence            8999999999  99999998654

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=3.9e-32  Score=247.27  Aligned_cols=238  Identities=29%  Similarity=0.419  Sum_probs=201.2

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||+++++.++++  +.+. +.+.|++.+++|+|++.++++|++|+....|.........+|.++|+|++|+|+++|++++
T Consensus         1 ~ka~~~~~~~~~--~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~   77 (340)
T cd05284           1 MKAARLYEYGKP--LRLE-DVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVD   77 (340)
T ss_pred             CeeeEeccCCCC--ceEE-eCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCC
Confidence            689999977643  7777 7888899999999999999999999998888544323456688999999999999999999


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHH
Q 021831          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (307)
                      .+++||+|++....                       ...+|+|++|+.++.+.++++|+++++++++.++..+.|||++
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~  157 (340)
T cd05284          78 GLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHA  157 (340)
T ss_pred             cCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHH
Confidence            99999999876421                       0125899999999999999999999999999999999999999


Q ss_pred             HHHH-cCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc-----CC
Q 021831          166 LKCA-ARMSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK-----GK  237 (307)
Q Consensus       166 l~~~-~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~  237 (307)
                      +... ..+++|++|||+|+ +.+|++++++|+.+| ++|+++.++ ++.+.++++|.++++++... +.+.+.     .+
T Consensus       158 l~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~i~~~~~~~~  235 (340)
T cd05284         158 VKKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDD-VVEEVRELTGGRG  235 (340)
T ss_pred             HHHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCcc-HHHHHHHHhCCCC
Confidence            9765 46889999999995 669999999999999 788888654 45566788999999988765 444432     36


Q ss_pred             ccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       238 ~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +|+++|++|+......++++|+++|+++.+|...
T Consensus       236 ~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~  269 (340)
T cd05284         236 ADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGG  269 (340)
T ss_pred             CCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCC
Confidence            9999999998658899999999999999998543

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=6.1e-32  Score=252.16  Aligned_cols=239  Identities=21%  Similarity=0.292  Sum_probs=184.7

Q ss_pred             cceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHH-hCCCccc---cCCCCCcccccceEEEEEE
Q 021831           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMR-SGYGRSI---FEPLLPLILGRDISGEVAA  102 (307)
Q Consensus        27 ~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~-~g~~~~~---~~~~~p~~~G~e~~G~V~~  102 (307)
                      ++||+++++.+   ..++++ +.|.|.|+++||+|||.++|||++|++.+ .|.....   ....+|.++|||++|+|++
T Consensus         1 m~~~a~~~~~~---~~l~~~-e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~   76 (410)
T cd08238           1 MKTKAWRMYGK---GDLRLE-KFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILK   76 (410)
T ss_pred             CCcEEEEEEcC---CceEEE-ecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEE
Confidence            46899999854   458998 99999999999999999999999999976 4531111   0124688999999999999


Q ss_pred             ecCCCC-CCCCCCEEEEecC------------CCCCCCcceeEEEecCC----ceeeCCCCCChhhhccc-cch-HHHHH
Q 021831          103 VGASVR-SLTVGQEVFGALH------------PTAVRGTYADYAVLSED----ELTPKPVSVTHADASAI-PFA-ALTAW  163 (307)
Q Consensus       103 ~G~~v~-~~~~Gd~V~~~~~------------~~~~~g~~~~~~~~~~~----~~~~ip~~~~~~~aa~~-~~~-~~ta~  163 (307)
                      +|++++ .|++||||+..+.            +...+|+|+||+.++.+    .++++|+++++++++.+ +.. ..+++
T Consensus        77 vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~  156 (410)
T cd08238          77 VGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAY  156 (410)
T ss_pred             eCCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHh
Confidence            999998 5999999987532            11236999999999986    68999999999988765 211 12233


Q ss_pred             HHH--------HHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC---EEEEEeCC-ccHHHHHHc--------CCc-eE
Q 021831          164 RAL--------KCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC---HVSATCGS-KSIDRVLAA--------GAE-QA  222 (307)
Q Consensus       164 ~~l--------~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~---~Vi~~~~~-~~~~~~~~~--------g~~-~v  222 (307)
                      .++        ....++++|++|+|+|++|++|++++|+|+.+|+   +|+++..+ ++.+.++++        |++ ++
T Consensus       157 ~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~  236 (410)
T cd08238         157 TANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLY  236 (410)
T ss_pred             hhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEE
Confidence            332        2356789999999999889999999999999864   78888554 456677776        665 56


Q ss_pred             EeCCC-hhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCCcEEEEecc
Q 021831          223 VDYSS-KDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       223 ~~~~~-~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      +++.. .++.+.+.     .++|++||++|....+..++++++++|+++.+++
T Consensus       237 i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g  289 (410)
T cd08238         237 VNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAG  289 (410)
T ss_pred             ECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEc
Confidence            77654 34444332     3799999999987789999999999998887754

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=8.2e-32  Score=244.72  Aligned_cols=235  Identities=26%  Similarity=0.365  Sum_probs=200.8

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++++..++.  .++++ +.+.|++.++||+|++.++++|++|+..+.|..+   ....|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~--~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~v~~vG~~v~   74 (333)
T cd08296           1 YKAVQVTEPGG--PLELV-ERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMP---GLSYPRVPGHEVVGRIDAVGEGVS   74 (333)
T ss_pred             CeEEEEccCCC--CceEE-eccCCCCCCCEEEEEEEEEecchHHHHHHhCCCC---CCCCCcccCcceeEEEEEECCCCc
Confidence            78999997643  48888 8999999999999999999999999998888432   134578999999999999999999


Q ss_pred             CCCCCCEEEEecC------------------------CCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHH
Q 021831          109 SLTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (307)
Q Consensus       109 ~~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (307)
                      ++++||+|++...                        ....+|++++|+.++.+.++++|+++++.+++.+.+.+.++|+
T Consensus        75 ~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~  154 (333)
T cd08296          75 RWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFN  154 (333)
T ss_pred             cCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHH
Confidence            9999999986310                        0112489999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc--CCccEE
Q 021831          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK--GKFDAV  241 (307)
Q Consensus       165 ~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~--~~~dvv  241 (307)
                      ++.. ..+++|++|||+| +|.+|++++++|+.+|++|+.+.++ ++.+.++++|+++++++...++.+.+.  +++|++
T Consensus       155 ~~~~-~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~d~v  232 (333)
T cd08296         155 ALRN-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQELGGAKLI  232 (333)
T ss_pred             HHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhcCCCCEE
Confidence            9874 4899999999999 7999999999999999998888665 456778899999999887766555443  479999


Q ss_pred             EECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          242 LDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       242 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ||++|....+..++++++++|+++.+|...
T Consensus       233 i~~~g~~~~~~~~~~~l~~~G~~v~~g~~~  262 (333)
T cd08296         233 LATAPNAKAISALVGGLAPRGKLLILGAAG  262 (333)
T ss_pred             EECCCchHHHHHHHHHcccCCEEEEEecCC
Confidence            999986668899999999999999999653

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=1.3e-31  Score=241.95  Aligned_cols=238  Identities=33%  Similarity=0.487  Sum_probs=202.7

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++++++++.+..+++. +.+.|.+.++||+|++.++++|++|+....|.....+....|.++|||++|+|+++|++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~   79 (324)
T cd08244           1 MRAIRLHEFGPPEVLVPE-DVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVD   79 (324)
T ss_pred             CeEEEEcCCCCccceEEe-ccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCC
Confidence            689999887777788887 7777778999999999999999999998888533222345678899999999999999999


Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHH
Q 021831          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG  188 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G  188 (307)
                      .+++||+|++...  ...|+|++|+.++.+.++++|+++++.+++.+++.+.++|.. .....++++++|+|+|++|.+|
T Consensus        80 ~~~~Gd~V~~~~~--~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~-~~~~~~~~~~~vlI~g~~~~~g  156 (324)
T cd08244          80 PAWLGRRVVAHTG--RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGL-LDLATLTPGDVVLVTAAAGGLG  156 (324)
T ss_pred             CCCCCCEEEEccC--CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHH-HHhcCCCCCCEEEEEcCCchHH
Confidence            9999999998761  123999999999999999999999999999999999999644 4578899999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCCc
Q 021831          189 FAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGG  262 (307)
Q Consensus       189 ~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G  262 (307)
                      ++++++|+.+|++|+++++. ++.+.++++|+++++++.+.++.+.+.     .++|+++|++|+. ....++++++++|
T Consensus       157 ~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~g  235 (324)
T cd08244         157 SLLVQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGA-IGRAALALLAPGG  235 (324)
T ss_pred             HHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChH-hHHHHHHHhccCc
Confidence            99999999999999888654 445667889998888887666544432     3699999999998 6788999999999


Q ss_pred             EEEEeccCc
Q 021831          263 HYMTLHGET  271 (307)
Q Consensus       263 ~~v~~g~~~  271 (307)
                      +++.+|...
T Consensus       236 ~~v~~g~~~  244 (324)
T cd08244         236 RFLTYGWAS  244 (324)
T ss_pred             EEEEEecCC
Confidence            999998653

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=5.1e-32  Score=246.96  Aligned_cols=235  Identities=25%  Similarity=0.353  Sum_probs=181.0

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCc-ccccceEEEEEEecCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPL-ILGRDISGEVAAVGASV  107 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~-~~G~e~~G~V~~~G~~v  107 (307)
                      |++++++..+..  .+++ +.+.|.+.++||+|||.++|||+||+++++|....   ...|. ++|||++|+|+++| .+
T Consensus         1 m~a~~~~~~~~~--~~~~-~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~---~~~~~~i~GHE~~G~V~evG-~~   73 (350)
T COG1063           1 MKAAVVYVGGGD--VRLE-EPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPF---VPPGDIILGHEFVGEVVEVG-VV   73 (350)
T ss_pred             CceeEEEecCCc--cccc-cCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCC---CCCCCcccCccceEEEEEec-cc
Confidence            566666654433  3355 66666788999999999999999999999984322   23333 89999999999999 77


Q ss_pred             CCCCCCCEEEEecCCC----------------------------CCCCcceeEEEecCCceee-CCCCCChhhhccccch
Q 021831          108 RSLTVGQEVFGALHPT----------------------------AVRGTYADYAVLSEDELTP-KPVSVTHADASAIPFA  158 (307)
Q Consensus       108 ~~~~~Gd~V~~~~~~~----------------------------~~~g~~~~~~~~~~~~~~~-ip~~~~~~~aa~~~~~  158 (307)
                      +.+++||||+..+..+                            ..+|+|+||+.+|.+..++ +|+++ ..+.+++..+
T Consensus        74 ~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~ep  152 (350)
T COG1063          74 RGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEP  152 (350)
T ss_pred             cCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcCh
Confidence            8899999998653210                            1469999999999765555 58888 5666666668


Q ss_pred             HHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeC-CccHHHHHH-cCCceEEeCCChhHHHHhc
Q 021831          159 ALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCG-SKSIDRVLA-AGAEQAVDYSSKDIELAIK  235 (307)
Q Consensus       159 ~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~-~~~~~~~~~-~g~~~v~~~~~~~~~~~~~  235 (307)
                      +.++|++.......+++++|+|+|+ |++|++++++++.+|+ +|+++.. .++++.+++ .+++.+.+...++....+.
T Consensus       153 la~~~~~~a~~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~  231 (350)
T COG1063         153 LATAYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEIL  231 (350)
T ss_pred             hhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHH
Confidence            9999888555666667779999995 9999999999999998 7777744 566777887 6666666655433332221


Q ss_pred             ----C-CccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          236 ----G-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       236 ----~-~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                          + ++|++|||+|....+.+++.+++++|+++.+|.+..
T Consensus       232 ~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~  273 (350)
T COG1063         232 ELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGG  273 (350)
T ss_pred             HHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCC
Confidence                3 799999999998889999999999999999997744

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=2e-31  Score=243.49  Aligned_cols=240  Identities=43%  Similarity=0.785  Sum_probs=204.3

Q ss_pred             eeEEEEcccCCCc-eeEEcCcccCCCCC-CCeEEEEEeeeecChhhHHHHhCCCcc------------ccCCCCCccccc
Q 021831           29 CRAVVLPRFGGPE-VLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRS------------IFEPLLPLILGR   94 (307)
Q Consensus        29 ~ka~~~~~~~~~~-~~~~~~~~~~p~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~~------------~~~~~~p~~~G~   94 (307)
                      ||+++++++++++ .++++ +.+.|.|. ++||+|++.++++|++|+.+..|...+            +.....|.++||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~   79 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLE-NARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGR   79 (350)
T ss_pred             CceEEecccCCCcceeeec-ccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecc
Confidence            7889998877653 47788 89999994 999999999999999999988874210            012356889999


Q ss_pred             ceEEEEEEecCCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCC
Q 021831           95 DISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE  174 (307)
Q Consensus        95 e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~  174 (307)
                      |++|+|+++|++++++++||+|++....+ ..|+|++|+.++.+.++++|+++++.+++.+++.+.++|+++.....+.+
T Consensus        80 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~-~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~  158 (350)
T cd08248          80 DCSGVVVDIGSGVKSFEIGDEVWGAVPPW-SQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNP  158 (350)
T ss_pred             eeEEEEEecCCCcccCCCCCEEEEecCCC-CCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCC
Confidence            99999999999999999999999875321 24999999999999999999999999999999999999999876777654


Q ss_pred             ----CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhc--CCccEEEECCCCh
Q 021831          175 ----GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK--GKFDAVLDTIGAP  248 (307)
Q Consensus       175 ----g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~--~~~dvvid~~g~~  248 (307)
                          |++|+|+|++|.+|++++++++.+|++|+++.++++...++++|.+++++....++.+.+.  +++|++||++|+.
T Consensus       159 ~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~vd~vi~~~g~~  238 (350)
T cd08248         159 KNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCSTDAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVILDTVGGD  238 (350)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCcchHHHHHHhCCceEEECCChhHHHHHHhcCCCCEEEECCChH
Confidence                9999999999999999999999999999888776666677889998888877655555444  4799999999988


Q ss_pred             hhHHHHHhcccCCcEEEEeccCc
Q 021831          249 ETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       249 ~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                       ....++++++++|+++.+|...
T Consensus       239 -~~~~~~~~l~~~G~~v~~g~~~  260 (350)
T cd08248         239 -TEKWALKLLKKGGTYVTLVSPL  260 (350)
T ss_pred             -HHHHHHHHhccCCEEEEecCCc
Confidence             8899999999999999998653

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=7e-32  Score=244.31  Aligned_cols=236  Identities=30%  Similarity=0.452  Sum_probs=205.5

Q ss_pred             ceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCC
Q 021831           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (307)
Q Consensus        28 ~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v  107 (307)
                      +||++++.++|.+..++++ +.+.|.|+++||+|++.++|+|++|+....|..+   ...+|.++|||++|+|+.+|+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~---~~~~~~~~g~e~~G~v~~vG~~v   76 (327)
T PRK10754          1 MAKRIEFHKHGGPEVLQAV-EFTPADPAENEVQVENKAIGINYIDTYIRSGLYP---PPSLPSGLGTEAAGVVSKVGSGV   76 (327)
T ss_pred             CceEEEEeccCChhHeEEe-eccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCC---CCCCCCccCcceEEEEEEeCCCC
Confidence            4899999999988999999 8999999999999999999999999998877432   23457789999999999999999


Q ss_pred             CCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchH
Q 021831          108 RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV  187 (307)
Q Consensus       108 ~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~  187 (307)
                      +.+++||+|+....   ..|+|++|+.++.+.++++|+++++++++.+++.+.++|+++.....+++|++|+|+|++|.+
T Consensus        77 ~~~~~Gd~V~~~~~---~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~i  153 (327)
T PRK10754         77 KHIKVGDRVVYAQS---ALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGV  153 (327)
T ss_pred             CCCCCCCEEEECCC---CCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHH
Confidence            99999999986532   238999999999999999999999999999888999999998877889999999999999999


Q ss_pred             HHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCC
Q 021831          188 GFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRG  261 (307)
Q Consensus       188 G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~  261 (307)
                      |++++++++.+|++++++++.+ +...++++|++++++....++.+.+.     .++|++||++|+. ....++++++++
T Consensus       154 g~~~~~lak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~  232 (327)
T PRK10754        154 GLIACQWAKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKD-TWEASLDCLQRR  232 (327)
T ss_pred             HHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHH-HHHHHHHHhccC
Confidence            9999999999999998886654 45567889998898877665554433     3799999999986 788899999999


Q ss_pred             cEEEEeccCc
Q 021831          262 GHYMTLHGET  271 (307)
Q Consensus       262 G~~v~~g~~~  271 (307)
                      |+++.+|...
T Consensus       233 g~~v~~g~~~  242 (327)
T PRK10754        233 GLMVSFGNAS  242 (327)
T ss_pred             CEEEEEccCC
Confidence            9999998653

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=1.6e-31  Score=246.42  Aligned_cols=234  Identities=23%  Similarity=0.312  Sum_probs=196.3

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||+.++...+.  .++++ +.|.|.|.++||+||+.++|+|++|++...|..    ...+|.++|||++|+|+++|++++
T Consensus         8 ~~a~~~~~~~~--~~~l~-~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~----~~~~p~v~G~e~~G~V~~vG~~v~   80 (373)
T cd08299           8 CKAAVLWEPKK--PFSIE-EIEVAPPKAHEVRIKIVATGICRSDDHVVSGKL----VTPFPVILGHEAAGIVESVGEGVT   80 (373)
T ss_pred             eEEEEEecCCC--CcEEE-EeecCCCCCCEEEEEEEEEEcCcccHHHhcCCC----CCCCCccccccceEEEEEeCCCCc
Confidence            88888886544  37888 899999999999999999999999999998843    235688999999999999999999


Q ss_pred             CCCCCCEEEEecCC--------------------------------------------CCCCCcceeEEEecCCceeeCC
Q 021831          109 SLTVGQEVFGALHP--------------------------------------------TAVRGTYADYAVLSEDELTPKP  144 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~--------------------------------------------~~~~g~~~~~~~~~~~~~~~ip  144 (307)
                      .+++||+|+.....                                            +...|+|+||+.++.+.++++|
T Consensus        81 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP  160 (373)
T cd08299          81 TVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKID  160 (373)
T ss_pred             cCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCC
Confidence            99999999875210                                            0024899999999999999999


Q ss_pred             CCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCCceE
Q 021831          145 VSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGAEQA  222 (307)
Q Consensus       145 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v  222 (307)
                      +++++++++.+.+++.++|+++....++++|++|+|+| .|++|++++++++.+|+ +|+++.++ ++.+.++++|++++
T Consensus       161 ~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~  239 (373)
T cd08299         161 AAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATEC  239 (373)
T ss_pred             CCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceE
Confidence            99999999999999999999887788999999999997 59999999999999999 79888654 55677889999999


Q ss_pred             EeCCChh--HHHHhc----CCccEEEECCCChhhHHHHHhcc-cCCcEEEEeccC
Q 021831          223 VDYSSKD--IELAIK----GKFDAVLDTIGAPETERLGLNFL-KRGGHYMTLHGE  270 (307)
Q Consensus       223 ~~~~~~~--~~~~~~----~~~dvvid~~g~~~~~~~~~~~l-~~~G~~v~~g~~  270 (307)
                      ++..+.+  +.+.+.    +++|++||++|+...+..++..+ +++|+++.+|..
T Consensus       240 i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~  294 (373)
T cd08299         240 INPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVP  294 (373)
T ss_pred             ecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccC
Confidence            8876432  333222    47999999999865777767655 579999999965

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-31  Score=239.75  Aligned_cols=235  Identities=31%  Similarity=0.441  Sum_probs=202.0

Q ss_pred             ceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCC
Q 021831           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (307)
Q Consensus        28 ~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v  107 (307)
                      +|||+++..++....++++ +.+.|.+.++||+|+|.++++|+.|+....|....  ....|.++|||++|+|+++|+++
T Consensus         1 ~m~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~~v   77 (334)
T PTZ00354          1 MMRAVTLKGFGGVDVLKIG-ESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPP--PPGSSEILGLEVAGYVEDVGSDV   77 (334)
T ss_pred             CcEEEEEEecCCCcceEEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCcccceeeEEEEEEeCCCC
Confidence            6999999988877778888 77778899999999999999999999988874321  23346789999999999999999


Q ss_pred             CCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchH
Q 021831          108 RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV  187 (307)
Q Consensus       108 ~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~  187 (307)
                      +++++||+|+++..    +|+|++|+.++.+.++++|+++++.+++.+..++.+||+++.....+++|++|+|+|++|.+
T Consensus        78 ~~~~~Gd~V~~~~~----~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~  153 (334)
T PTZ00354         78 KRFKEGDRVMALLP----GGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGV  153 (334)
T ss_pred             CCCCCCCEEEEecC----CCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchH
Confidence            99999999998742    38999999999999999999999999999999999999999877899999999999999999


Q ss_pred             HHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChh-HHHHhc-----CCccEEEECCCChhhHHHHHhcccC
Q 021831          188 GFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKD-IELAIK-----GKFDAVLDTIGAPETERLGLNFLKR  260 (307)
Q Consensus       188 G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~-~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~  260 (307)
                      |++++++|+.+|++++.+.++ ++.+.+.++|.++++++...+ +.+.+.     .++|++||++|+. .+..+++++++
T Consensus       154 g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~  232 (334)
T PTZ00354        154 GTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGS-YLSETAEVLAV  232 (334)
T ss_pred             HHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchH-HHHHHHHHhcc
Confidence            999999999999987666544 456667889998898876644 444332     3799999999876 88899999999


Q ss_pred             CcEEEEeccC
Q 021831          261 GGHYMTLHGE  270 (307)
Q Consensus       261 ~G~~v~~g~~  270 (307)
                      +|+++.+|..
T Consensus       233 ~g~~i~~~~~  242 (334)
T PTZ00354        233 DGKWIVYGFM  242 (334)
T ss_pred             CCeEEEEecC
Confidence            9999999854

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=4.3e-31  Score=239.24  Aligned_cols=232  Identities=29%  Similarity=0.434  Sum_probs=201.3

Q ss_pred             ceeEEEEcccCC--CceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecC
Q 021831           28 SCRAVVLPRFGG--PEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (307)
Q Consensus        28 ~~ka~~~~~~~~--~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~  105 (307)
                      .||+|.+..++.  ++.++++ +.+.|.+.++|++|++.++|+|++|+....|....  ...+|.++|||++|+|+.+|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~--~~~~p~~~g~e~~G~v~~vG~   77 (329)
T cd08250           1 SFRKLVVHRLSPNFREATSIV-DVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDP--GVKPPFDCGFEGVGEVVAVGE   77 (329)
T ss_pred             CceEEEeccCCCCcccCceEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCC--CCCCCcccCceeEEEEEEECC
Confidence            489999999877  6788888 88999999999999999999999999988874321  135788999999999999999


Q ss_pred             CCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCc
Q 021831          106 SVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGG  185 (307)
Q Consensus       106 ~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g  185 (307)
                      +++.+++||+|++...     |+|++|+.++.+.++++|++  +.+++.+..++.+||+++.....+++|++|+|+|++|
T Consensus        78 ~v~~~~~Gd~V~~~~~-----g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g  150 (329)
T cd08250          78 GVTDFKVGDAVATMSF-----GAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAG  150 (329)
T ss_pred             CCCCCCCCCEEEEecC-----cceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCcc
Confidence            9999999999998865     99999999999999999997  3467788889999999998778899999999999999


Q ss_pred             hHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc----CCccEEEECCCChhhHHHHHhcccC
Q 021831          186 AVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKR  260 (307)
Q Consensus       186 ~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~  260 (307)
                      .+|++++++++.+|++|++++++ ++.+.++++|.+++++....++.+.+.    +++|++||++|+. .+..+++++++
T Consensus       151 ~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~~-~~~~~~~~l~~  229 (329)
T cd08250         151 GTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGE-MFDTCVDNLAL  229 (329)
T ss_pred             HHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcHH-HHHHHHHHhcc
Confidence            99999999999999999888665 445667889998888877655444332    4799999999986 88999999999


Q ss_pred             CcEEEEeccC
Q 021831          261 GGHYMTLHGE  270 (307)
Q Consensus       261 ~G~~v~~g~~  270 (307)
                      +|+++.+|..
T Consensus       230 ~g~~v~~g~~  239 (329)
T cd08250         230 KGRLIVIGFI  239 (329)
T ss_pred             CCeEEEEecc
Confidence            9999999865

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=2.4e-31  Score=247.05  Aligned_cols=245  Identities=29%  Similarity=0.391  Sum_probs=199.8

Q ss_pred             cccceeEEEEc--ccCCC-ceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCcccc-------CCCCCccccc
Q 021831           25 VTTSCRAVVLP--RFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF-------EPLLPLILGR   94 (307)
Q Consensus        25 ~~~~~ka~~~~--~~~~~-~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~-------~~~~p~~~G~   94 (307)
                      +|.+||++++.  ..+++ ..+++. +.+.|.++++||+|++.++++|++|++...|......       ....+.++||
T Consensus         9 ~~~~~~a~~~~~~~~g~~~~~~~~~-~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~   87 (393)
T cd08246           9 VPEKMYAFAIRPERYGDPAQAIQLE-DVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGS   87 (393)
T ss_pred             CchhhhheeeecccCCCcccceEEe-ecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCcccccc
Confidence            78999999885  33444 357888 8899999999999999999999999988776311000       0112358899


Q ss_pred             ceEEEEEEecCCCCCCCCCCEEEEecCCC------------------------CCCCcceeEEEecCCceeeCCCCCChh
Q 021831           95 DISGEVAAVGASVRSLTVGQEVFGALHPT------------------------AVRGTYADYAVLSEDELTPKPVSVTHA  150 (307)
Q Consensus        95 e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~  150 (307)
                      |++|+|+++|++++.+++||+|++.+...                        ..+|+|++|+.++...++++|++++++
T Consensus        88 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~  167 (393)
T cd08246          88 DASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWE  167 (393)
T ss_pred             ceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHH
Confidence            99999999999999999999998864210                        124899999999999999999999999


Q ss_pred             hhccccchHHHHHHHHHHH--cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCC
Q 021831          151 DASAIPFAALTAWRALKCA--ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSS  227 (307)
Q Consensus       151 ~aa~~~~~~~ta~~~l~~~--~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~  227 (307)
                      +++.+..++.+||+++...  ..+++|++|+|+|++|.+|++++++|+.+|+++++++++ ++.+.++++|+++++++..
T Consensus       168 ~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~G~~~~i~~~~  247 (393)
T cd08246         168 EAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVINRRD  247 (393)
T ss_pred             HHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence            9999999999999998654  678999999999988999999999999999988777654 4566788899999888643


Q ss_pred             h----------------------hHHHHhc-----C-CccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          228 K----------------------DIELAIK-----G-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       228 ~----------------------~~~~~~~-----~-~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .                      .+.+.+.     . ++|++||++|+. .+..++++++++|+++.+|...
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~  318 (393)
T cd08246         248 FDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRA-TFPTSVFVCDRGGMVVICAGTT  318 (393)
T ss_pred             cccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchH-hHHHHHHHhccCCEEEEEcccC
Confidence            2                      1222222     2 799999999986 7899999999999999998653

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=3.8e-31  Score=242.01  Aligned_cols=234  Identities=25%  Similarity=0.332  Sum_probs=197.0

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++++..++   .++++ +.+.|.+.++||+|||.++++|++|++.+.|...   ....|.++|||++|+|+++|++++
T Consensus         1 mka~~~~~~~---~~~l~-~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~---~~~~~~~~G~e~~G~V~~vG~~v~   73 (351)
T cd08285           1 MKAFAMLGIG---KVGWI-EKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAP---GERHGMILGHEAVGVVEEVGSEVK   73 (351)
T ss_pred             CceEEEccCC---ccEEE-ECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCC---CCCCCcccCcceEEEEEEecCCcC
Confidence            7899998654   36777 8888889999999999999999999998877432   235688999999999999999999


Q ss_pred             CCCCCCEEEEecCC--------------------------CCCCCcceeEEEecCC--ceeeCCCCCChhhhccccchHH
Q 021831          109 SLTVGQEVFGALHP--------------------------TAVRGTYADYAVLSED--ELTPKPVSVTHADASAIPFAAL  160 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~--------------------------~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~  160 (307)
                      ++++||+|++....                          ...+|+|++|+.++.+  .++++|+++++++++.++..+.
T Consensus        74 ~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~  153 (351)
T cd08285          74 DFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMS  153 (351)
T ss_pred             ccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchh
Confidence            99999999874310                          1135899999999974  8999999999999999988999


Q ss_pred             HHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc---
Q 021831          161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK---  235 (307)
Q Consensus       161 ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~---  235 (307)
                      ++|+++ ....+++|++|||+| +|.+|++++|+|+.+|+ .++++.++ ++.+.++++|+++++++...++.+.+.   
T Consensus       154 ta~~~~-~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~  231 (351)
T cd08285         154 TGFHGA-ELANIKLGDTVAVFG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLT  231 (351)
T ss_pred             hHHHHH-HccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHHHHHHh
Confidence            999996 478899999999997 59999999999999999 57777554 455668899999999887665544332   


Q ss_pred             --CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          236 --GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       236 --~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                        .++|++||++|+...+..++++++++|+++.+|...
T Consensus       232 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  269 (351)
T cd08285         232 GGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYG  269 (351)
T ss_pred             CCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccC
Confidence              379999999998768899999999999999998654

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=5.4e-31  Score=244.98  Aligned_cols=246  Identities=29%  Similarity=0.397  Sum_probs=200.7

Q ss_pred             ccccceeEEEEcc--cCCC-ceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccc-------cCCCCC-ccc
Q 021831           24 LVTTSCRAVVLPR--FGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSI-------FEPLLP-LIL   92 (307)
Q Consensus        24 ~~~~~~ka~~~~~--~~~~-~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-------~~~~~p-~~~   92 (307)
                      .+|++||+|++..  .+++ +.+++. +.+.|.|.++||+|++.++++|.+|.....+.....       .....| .++
T Consensus         3 ~~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~   81 (398)
T TIGR01751         3 VVPETMYAFAIREERDGDPRQAIQLE-VVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHII   81 (398)
T ss_pred             ccchhhhheEEecccCCCcccceEEe-ecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceec
Confidence            5688999999965  6655 679998 899999999999999999999999988765532110       011223 379


Q ss_pred             ccceEEEEEEecCCCCCCCCCCEEEEecCCC------------------------CCCCcceeEEEecCCceeeCCCCCC
Q 021831           93 GRDISGEVAAVGASVRSLTVGQEVFGALHPT------------------------AVRGTYADYAVLSEDELTPKPVSVT  148 (307)
Q Consensus        93 G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~------------------------~~~g~~~~~~~~~~~~~~~ip~~~~  148 (307)
                      |||++|+|+++|++++.+++||+|++.+...                        ...|+|++|+.++.+.++++|++++
T Consensus        82 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~  161 (398)
T TIGR01751        82 GSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLT  161 (398)
T ss_pred             ccceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCC
Confidence            9999999999999999999999998864210                        1258999999999999999999999


Q ss_pred             hhhhccccchHHHHHHHHHH--HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeC
Q 021831          149 HADASAIPFAALTAWRALKC--AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDY  225 (307)
Q Consensus       149 ~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~  225 (307)
                      +++++.+...+.+||+++..  ...+++|++|+|+|++|.+|++++++++.+|+++++++++ ++...++++|+++++++
T Consensus       162 ~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g~~~~v~~  241 (398)
T TIGR01751       162 WEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRELGAEAVIDR  241 (398)
T ss_pred             HHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCCEEecC
Confidence            99999999999999999864  4678999999999999999999999999999988777544 45566888999999886


Q ss_pred             CChh----------------------HHHHhc-----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          226 SSKD----------------------IELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       226 ~~~~----------------------~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ...+                      +.+.+.     +++|++|||+|.. .+..++++++++|+++.+|...
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~  313 (398)
T TIGR01751       242 NDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRA-TFPTSVFVCRRGGMVVICGGTT  313 (398)
T ss_pred             CCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHhhccCCEEEEEcccc
Confidence            5321                      222221     3699999999976 7889999999999999999753

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=8.1e-31  Score=238.76  Aligned_cols=238  Identities=32%  Similarity=0.452  Sum_probs=201.6

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++++..++ +..++++ +.+.|.|.++|++|++.++++|++|+.+..|....  ....|.++|+|++|+|+++|++++
T Consensus         1 m~a~~~~~~~-~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~V~~vG~~~~   76 (341)
T cd08297           1 MKAAVVEEFG-EKPYEVK-DVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPV--KPKLPLIGGHEGAGVVVAVGPGVS   76 (341)
T ss_pred             CceEEeeccC-CCCceEE-EeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCc--CCCCCccCCcccceEEEEeCCCCC
Confidence            7899998776 5678888 89999999999999999999999999988874321  134567899999999999999999


Q ss_pred             CCCCCCEEEEecC------------------------CCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHH
Q 021831          109 SLTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (307)
Q Consensus       109 ~~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (307)
                      .+++||+|+....                        +....|+|++|+.++.+.++++|+++++.+++.+...+.|||+
T Consensus        77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~  156 (341)
T cd08297          77 GLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYK  156 (341)
T ss_pred             CCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHH
Confidence            9999999987520                        0012489999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc-----CCc
Q 021831          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK-----GKF  238 (307)
Q Consensus       165 ~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~  238 (307)
                      ++.. ..++++++|||+|+++.+|++++++|+.+|++|+++.++ ++.+.++++|+++++++...++.+.+.     +++
T Consensus       157 ~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~v  235 (341)
T cd08297         157 ALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGA  235 (341)
T ss_pred             HHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcCCCC
Confidence            9874 588999999999998889999999999999999998665 445667889999999887755544333     479


Q ss_pred             cEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       239 dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      |+++|+.+....+..++++++++|+++.+|...
T Consensus       236 d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~  268 (341)
T cd08297         236 HAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPP  268 (341)
T ss_pred             CEEEEcCCchHHHHHHHHHhhcCCEEEEecCCC
Confidence            999998877668899999999999999998653

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=6.2e-31  Score=241.90  Aligned_cols=234  Identities=25%  Similarity=0.380  Sum_probs=197.5

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      +|++++.+.+.+  ++++ +.+.|.+.+++|+|++.++++|++|++...|..    ...+|.++|||++|+|+++|++++
T Consensus         1 ~~a~~~~~~~~~--~~~~-~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~----~~~~~~i~g~e~~G~V~~vG~~v~   73 (365)
T cd05279           1 CKAAVLWEKGKP--LSIE-EIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKL----PTPLPVILGHEGAGIVESIGPGVT   73 (365)
T ss_pred             CceeEEecCCCC--cEEE-EeecCCCCCCeEEEEEEEeeecchhHHHhcCCC----CCCCCcccccceeEEEEEeCCCcc
Confidence            467888865544  7888 899999999999999999999999999888842    245678999999999999999999


Q ss_pred             CCCCCCEEEEecCCC--------------------------------------------CCCCcceeEEEecCCceeeCC
Q 021831          109 SLTVGQEVFGALHPT--------------------------------------------AVRGTYADYAVLSEDELTPKP  144 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~~--------------------------------------------~~~g~~~~~~~~~~~~~~~ip  144 (307)
                      .+++||+|++.....                                            ...|+|++|+.++.+.++++|
T Consensus        74 ~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP  153 (365)
T cd05279          74 TLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKID  153 (365)
T ss_pred             cCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECC
Confidence            999999998763200                                            013689999999999999999


Q ss_pred             CCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEe-CCccHHHHHHcCCceE
Q 021831          145 VSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATC-GSKSIDRVLAAGAEQA  222 (307)
Q Consensus       145 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~-Vi~~~-~~~~~~~~~~~g~~~v  222 (307)
                      +++++++++.+..++.++|+++.....+++|++|||+| .|++|++++++|+.+|++ |+++. +.++.+.++++|++++
T Consensus       154 ~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~  232 (365)
T cd05279         154 PDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATEC  232 (365)
T ss_pred             CCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCee
Confidence            99999999999999999999987788999999999997 599999999999999995 66665 4455667889999999


Q ss_pred             EeCCCh--hHHHHhc----CCccEEEECCCChhhHHHHHhccc-CCcEEEEeccC
Q 021831          223 VDYSSK--DIELAIK----GKFDAVLDTIGAPETERLGLNFLK-RGGHYMTLHGE  270 (307)
Q Consensus       223 ~~~~~~--~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~-~~G~~v~~g~~  270 (307)
                      ++..+.  ++.+.+.    +++|++||++|....+..++++++ ++|+++.+|..
T Consensus       233 v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~  287 (365)
T cd05279         233 INPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVP  287 (365)
T ss_pred             cccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecC
Confidence            887665  4443332    479999999997668899999999 99999999864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=9e-31  Score=238.26  Aligned_cols=233  Identities=18%  Similarity=0.269  Sum_probs=192.1

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++++..   ++.++++ +.+.|.|.++|++||+.++++|++|+..+.|...   ...+|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~---~~~~~~~-~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~   73 (339)
T PRK10083          1 MKSIVIEK---PNSLAIE-ERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNP---FAKYPRVIGHEFFGVIDAVGEGVD   73 (339)
T ss_pred             CeEEEEec---CCeeEEE-eccCCCCCCCeEEEEEEEEEEcccchHHHcCCCC---cCCCCcccccceEEEEEEECCCCc
Confidence            68899985   4468888 8999999999999999999999999998887432   124688999999999999999999


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHH
Q 021831          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (307)
                      .+++||+|+.....                       ...+|+|++|+.++.+.++++|+++++.+++ +..++.++|++
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~  152 (339)
T PRK10083         74 AARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANV  152 (339)
T ss_pred             cCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHH
Confidence            99999999843110                       1124899999999999999999999988876 44677888865


Q ss_pred             HHHHcCCCCCCEEEEEcCCchHHHHHHHHHHH-cCCE-EEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc--C-Ccc
Q 021831          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVA-SGCH-VSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK--G-KFD  239 (307)
Q Consensus       166 l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~-~G~~-Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~--~-~~d  239 (307)
                      . ...++++|++|+|+| .|.+|++++|+|+. +|++ ++++.++ ++.+.++++|+++++++.+.++.+.+.  + ++|
T Consensus       153 ~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~g~~~d  230 (339)
T PRK10083        153 T-GRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEEKGIKPT  230 (339)
T ss_pred             H-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhcCCCCCC
Confidence            4 578899999999999 69999999999996 6995 6666443 455668899999999887766666554  2 457


Q ss_pred             EEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          240 AVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       240 vvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ++||++|+...+..++++++++|+++.+|...
T Consensus       231 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  262 (339)
T PRK10083        231 LIIDAACHPSILEEAVTLASPAARIVLMGFSS  262 (339)
T ss_pred             EEEECCCCHHHHHHHHHHhhcCCEEEEEccCC
Confidence            99999997668899999999999999999653

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=6.2e-31  Score=239.92  Aligned_cols=233  Identities=25%  Similarity=0.335  Sum_probs=196.5

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCC-CCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v  107 (307)
                      ||++.+..++   .+.+. +.+.|.| .++||+||+.++++|++|+....|....   ...|.++|+|++|+|+++|+++
T Consensus         1 ~ka~~~~~~~---~~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v   73 (347)
T cd05278           1 MKALVYLGPG---KIGLE-EVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG---AKHGMILGHEFVGEVVEVGSDV   73 (347)
T ss_pred             CceEEEecCC---ceEEE-EcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC---CCCCceeccceEEEEEEECCCc
Confidence            6889998543   47888 8888888 8999999999999999999988885422   4557899999999999999999


Q ss_pred             CCCCCCCEEEEecCCC--------------------------CCCCcceeEEEecCC--ceeeCCCCCChhhhccccchH
Q 021831          108 RSLTVGQEVFGALHPT--------------------------AVRGTYADYAVLSED--ELTPKPVSVTHADASAIPFAA  159 (307)
Q Consensus       108 ~~~~~Gd~V~~~~~~~--------------------------~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~  159 (307)
                      +++++||+|++.+...                          ..+|+|++|+.++.+  .++++|+++++++++.++.++
T Consensus        74 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~  153 (347)
T cd05278          74 KRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDIL  153 (347)
T ss_pred             cccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchh
Confidence            9999999998732110                          125899999999987  899999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc--
Q 021831          160 LTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK--  235 (307)
Q Consensus       160 ~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~--  235 (307)
                      .+||+++ ...++++|++|||.| .|.+|++++|+|+.+|+ +++++.++ ++.+.++++|+++++++.+.++.+.+.  
T Consensus       154 ~ta~~~~-~~~~~~~~~~VlI~g-~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~~~  231 (347)
T cd05278         154 PTGFHGA-ELAGIKPGSTVAVIG-AGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILEL  231 (347)
T ss_pred             hheeehh-hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchHHHHHHHH
Confidence            9999998 578899999999977 59999999999999997 78887444 345567889999999887766555433  


Q ss_pred             ---CCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          236 ---GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       236 ---~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                         +++|++||++|+...+..++++|+++|+++.+|..
T Consensus       232 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~  269 (347)
T cd05278         232 TGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVY  269 (347)
T ss_pred             cCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCC
Confidence               47999999999855889999999999999999844

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=8.6e-31  Score=236.98  Aligned_cols=230  Identities=32%  Similarity=0.492  Sum_probs=194.4

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||+++++.++ .+.++++ +.+.|+++++||+|++.++++|++|+....+.    ....+|.++|||++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~-~~~~~~~-~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~~~~g~e~~G~v~~vG~~v~   74 (325)
T cd08264           1 MKALVFEKSG-IENLKVE-DVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV----KVKPMPHIPGAEFAGVVEEVGDHVK   74 (325)
T ss_pred             CeeEEeccCC-CCceEEE-eccCCCCCCCeEEEEEEEEEechHHHHHHhCC----CCCCCCeecccceeEEEEEECCCCC
Confidence            6899998766 6678888 77888899999999999999999999887652    1123577899999999999999999


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHH
Q 021831          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (307)
                      ++++||+|+.....                       ....|+|++|+.++.+.++++|+++++++++.++.++.+||++
T Consensus        75 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~  154 (325)
T cd08264          75 GVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHA  154 (325)
T ss_pred             CCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHH
Confidence            99999999875210                       0124899999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCCh--hHHHHhcCCccEEEE
Q 021831          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK--DIELAIKGKFDAVLD  243 (307)
Q Consensus       166 l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~~~~~~dvvid  243 (307)
                      +. ...+++|++|+|+|++|.+|++++++|+.+|++|+++.+   .+.++++|++++++..+.  .+.... +++|+++|
T Consensus       155 l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~---~~~~~~~g~~~~~~~~~~~~~l~~~~-~~~d~vl~  229 (325)
T cd08264         155 LK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR---KDWLKEFGADEVVDYDEVEEKVKEIT-KMADVVIN  229 (325)
T ss_pred             HH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH---HHHHHHhCCCeeecchHHHHHHHHHh-CCCCEEEE
Confidence            86 488999999999999899999999999999999888763   255678998888876541  122222 67999999


Q ss_pred             CCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          244 TIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       244 ~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ++|+. .+..++++|+++|+++.+|..
T Consensus       230 ~~g~~-~~~~~~~~l~~~g~~v~~g~~  255 (325)
T cd08264         230 SLGSS-FWDLSLSVLGRGGRLVTFGTL  255 (325)
T ss_pred             CCCHH-HHHHHHHhhccCCEEEEEecC
Confidence            99986 889999999999999999864

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=1.3e-30  Score=235.48  Aligned_cols=236  Identities=24%  Similarity=0.296  Sum_probs=196.5

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||+++++.+++++.++++ +.+.|.+.++||+|++.++++|++|+....|..+.  ....|.++|||++|+|+++  +++
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~--~~~   75 (325)
T cd05280           1 FKALVVEEQDGGVSLFLR-TLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGV--TRNYPHTPGIDAAGTVVSS--DDP   75 (325)
T ss_pred             CceEEEcccCCCCcceEE-eCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCC--CCCCCCccCcccEEEEEEe--CCC
Confidence            789999988776679998 89999999999999999999999999998885321  2335778999999999998  466


Q ss_pred             CCCCCCEEEEecCC--CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCC--C-CCCEEEEEcC
Q 021831          109 SLTVGQEVFGALHP--TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARM--S-EGQRLLVLGG  183 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~--~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~--~-~g~~VlI~Ga  183 (307)
                      .+++||+|++....  ...+|+|++|+.++.+.++++|+++++.+++.+++.+.++|+++......  + .+++|+|+|+
T Consensus        76 ~~~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~  155 (325)
T cd05280          76 RFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGA  155 (325)
T ss_pred             CCCCCCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECC
Confidence            89999999886411  11248999999999999999999999999999999999999998655433  5 4679999999


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChh--HHHHhc-CCccEEEECCCChhhHHHHHhccc
Q 021831          184 GGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKD--IELAIK-GKFDAVLDTIGAPETERLGLNFLK  259 (307)
Q Consensus       184 ~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~--~~~~~~-~~~dvvid~~g~~~~~~~~~~~l~  259 (307)
                      +|.+|++++++|+.+|++|++++++ ++.+.++++|++++++..+..  ...... +++|++||++|+. .+..++++++
T Consensus       156 ~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~  234 (325)
T cd05280         156 TGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGD-VLANLLKQTK  234 (325)
T ss_pred             ccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEcchhHHHHHHHHhcCCCccEEEECCchH-HHHHHHHhhc
Confidence            9999999999999999998888655 456668889999988866432  122222 4799999999997 8999999999


Q ss_pred             CCcEEEEeccC
Q 021831          260 RGGHYMTLHGE  270 (307)
Q Consensus       260 ~~G~~v~~g~~  270 (307)
                      ++|+++.+|..
T Consensus       235 ~~g~~v~~g~~  245 (325)
T cd05280         235 YGGVVASCGNA  245 (325)
T ss_pred             CCCEEEEEecC
Confidence            99999999864

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.3e-31  Score=241.59  Aligned_cols=235  Identities=31%  Similarity=0.484  Sum_probs=199.9

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||+|++..++.+  ++++ +.++|.+.++||+|++.++++|++|+.+..|..    +..+|.++|||++|+|+.+|++++
T Consensus         1 ~~a~~~~~~~~~--~~~~-~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~----~~~~p~~~g~e~~G~v~~vG~~~~   73 (367)
T cd08263           1 MKAAVLKGPNPP--LTIE-EIPVPRPKEGEILIRVAACGVCHSDLHVLKGEL----PFPPPFVLGHEISGEVVEVGPNVE   73 (367)
T ss_pred             CeeEEEecCCCC--cEEE-EeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCC----CCCCCcccccccceEEEEeCCCCC
Confidence            689999977643  7777 889999999999999999999999999888743    235678999999999999999998


Q ss_pred             C---CCCCCEEEEecCC---------------------------------------------CCCCCcceeEEEecCCce
Q 021831          109 S---LTVGQEVFGALHP---------------------------------------------TAVRGTYADYAVLSEDEL  140 (307)
Q Consensus       109 ~---~~~Gd~V~~~~~~---------------------------------------------~~~~g~~~~~~~~~~~~~  140 (307)
                      +   +++||+|++....                                             ....|.|++|+.++.+.+
T Consensus        74 ~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  153 (367)
T cd08263          74 NPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATAL  153 (367)
T ss_pred             CCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhE
Confidence            8   9999999883210                                             012589999999999999


Q ss_pred             eeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCC-ccHHHHHHcC
Q 021831          141 TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGS-KSIDRVLAAG  218 (307)
Q Consensus       141 ~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~-Vi~~~~~-~~~~~~~~~g  218 (307)
                      +++|+++++.+++.++.++++||+++.....++++++|||+| +|.+|++++++|+.+|++ ++++.++ ++.+.++++|
T Consensus       154 ~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g  232 (367)
T cd08263         154 APLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELG  232 (367)
T ss_pred             EECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhC
Confidence            999999999999999999999999998778889999999996 699999999999999996 8877554 4456678899


Q ss_pred             CceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          219 AEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       219 ~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .+++++++..++.+.+.     .++|++||++++......++++++++|+++.+|...
T Consensus       233 ~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~  290 (367)
T cd08263         233 ATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAP  290 (367)
T ss_pred             CceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCC
Confidence            99999987766554432     369999999998657788999999999999998653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=1.1e-30  Score=236.33  Aligned_cols=235  Identities=25%  Similarity=0.312  Sum_probs=193.9

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||||++..++++..+.++ +.+.|.|.++||+|++.++++|++|.....+..  .....+|.++|||++|+|++.|  ++
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~--~~~~~~~~~~g~e~~G~V~~~~--~~   75 (326)
T cd08289           1 FQALVVEKDEDDVSVSVK-NLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGG--KIVKRYPFIPGIDLAGTVVESN--DP   75 (326)
T ss_pred             CeeEEEeccCCcceeEEE-EccCCCCCCCeEEEEEEEEecChHHhhhhcCCc--cccCCCCcCcccceeEEEEEcC--CC
Confidence            789999988777778888 899999999999999999999999987654311  1123458899999999999854  57


Q ss_pred             CCCCCCEEEEecC--CCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcC---CCCCCEEEEEcC
Q 021831          109 SLTVGQEVFGALH--PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAAR---MSEGQRLLVLGG  183 (307)
Q Consensus       109 ~~~~Gd~V~~~~~--~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~---~~~g~~VlI~Ga  183 (307)
                      .+++||+|++...  +...+|+|++|+.++.+.++++|+++++++++.+++.+.+||+++.....   ..++++|||+|+
T Consensus        76 ~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~  155 (326)
T cd08289          76 RFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGA  155 (326)
T ss_pred             CCCCCCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcC
Confidence            7999999988752  11235999999999999999999999999999999999999988764332   345789999999


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHh---c-CCccEEEECCCChhhHHHHHhcc
Q 021831          184 GGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAI---K-GKFDAVLDTIGAPETERLGLNFL  258 (307)
Q Consensus       184 ~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~---~-~~~dvvid~~g~~~~~~~~~~~l  258 (307)
                      +|.+|++++++|+.+|++|++++++ ++.+.++++|++++++..+.. .+.+   . +++|++||++|+. .+..+++++
T Consensus       156 ~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l  233 (326)
T cd08289         156 TGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREELQ-EESIKPLEKQRWAGAVDPVGGK-TLAYLLSTL  233 (326)
T ss_pred             CchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhHH-HHHHHhhccCCcCEEEECCcHH-HHHHHHHHh
Confidence            9999999999999999999988654 456678889998888876532 2222   2 4799999999986 889999999


Q ss_pred             cCCcEEEEeccC
Q 021831          259 KRGGHYMTLHGE  270 (307)
Q Consensus       259 ~~~G~~v~~g~~  270 (307)
                      +++|+++.+|..
T Consensus       234 ~~~G~~i~~g~~  245 (326)
T cd08289         234 QYGGSVAVSGLT  245 (326)
T ss_pred             hcCCEEEEEeec
Confidence            999999999965

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.4e-30  Score=238.21  Aligned_cols=236  Identities=21%  Similarity=0.273  Sum_probs=192.2

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccc------cCCCCCcccccceEEEEEE
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSI------FEPLLPLILGRDISGEVAA  102 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~------~~~~~p~~~G~e~~G~V~~  102 (307)
                      ||+++++.+   .+++++ +.+.|++.+++|+|++.++++|+.|+....|....+      ....+|.++|||++|+|++
T Consensus         1 mka~~~~~~---~~~~~~-~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~   76 (350)
T cd08256           1 MRAVVCHGP---QDYRLE-EVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVE   76 (350)
T ss_pred             CeeEEEecC---CceEEE-ECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEE
Confidence            689999854   458888 899999999999999999999999999888742111      0114677899999999999


Q ss_pred             ecCCCC--CCCCCCEEEEecCC-----------------------C--CCCCcceeEEEecCC-ceeeCCCCCChhhhcc
Q 021831          103 VGASVR--SLTVGQEVFGALHP-----------------------T--AVRGTYADYAVLSED-ELTPKPVSVTHADASA  154 (307)
Q Consensus       103 ~G~~v~--~~~~Gd~V~~~~~~-----------------------~--~~~g~~~~~~~~~~~-~~~~ip~~~~~~~aa~  154 (307)
                      +|++++  ++++||+|++....                       .  ...|+|++|+.++.+ .++++|+++++.+++.
T Consensus        77 vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~  156 (350)
T cd08256          77 LGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAIL  156 (350)
T ss_pred             eCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhh
Confidence            999999  89999999872110                       0  125899999999988 5789999999999988


Q ss_pred             ccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCC-ccHHHHHHcCCceEEeCCChhHHH
Q 021831          155 IPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGS-KSIDRVLAAGAEQAVDYSSKDIEL  232 (307)
Q Consensus       155 ~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~-Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~  232 (307)
                      + .++.++|+++ ...++++|++|+|.| .|.+|++++++|+.+|++ ++++.++ ++.+.++++|+++++++...++.+
T Consensus       157 ~-~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  233 (350)
T cd08256         157 I-EPLACALHAV-DRANIKFDDVVVLAG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVDVVE  233 (350)
T ss_pred             h-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcCHHH
Confidence            8 8999999998 588999999999955 699999999999999985 5555544 345567889999998877655444


Q ss_pred             Hhc-----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          233 AIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       233 ~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .+.     .++|++||++|+...+..++++++++|+++.+|...
T Consensus       234 ~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  277 (350)
T cd08256         234 KIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFG  277 (350)
T ss_pred             HHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCC
Confidence            332     269999999997557888999999999999998643

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=1.8e-30  Score=234.61  Aligned_cols=235  Identities=26%  Similarity=0.332  Sum_probs=196.5

Q ss_pred             eEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCCC
Q 021831           30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS  109 (307)
Q Consensus        30 ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~  109 (307)
                      ||++++..+.+.+++++ +.|.|.+.++||+|++.++++|++|+....|...  .....|.++|||++|+|+.  ++++.
T Consensus         1 ~a~~~~~~~~~~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~g~e~~G~V~~--~~~~~   75 (323)
T TIGR02823         1 KALVVEKEDGKVSAQVE-TLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGG--VVRSYPMIPGIDAAGTVVS--SEDPR   75 (323)
T ss_pred             CeEEEccCCCCcceeEe-ecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCC--CCCCCCccceeeeEEEEEe--cCCCC
Confidence            68889988888889999 9999999999999999999999999998888532  1234588899999999988  56778


Q ss_pred             CCCCCEEEEecCC--CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHc--CCCCCC-EEEEEcCC
Q 021831          110 LTVGQEVFGALHP--TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAA--RMSEGQ-RLLVLGGG  184 (307)
Q Consensus       110 ~~~Gd~V~~~~~~--~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~--~~~~g~-~VlI~Ga~  184 (307)
                      |++||+|++....  ...+|.|++|+.++.+.++++|+++++.+++.++..+.++|+++....  .+.+|+ +|+|+|++
T Consensus        76 ~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~  155 (323)
T TIGR02823        76 FREGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGAT  155 (323)
T ss_pred             CCCCCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCC
Confidence            9999999887411  112489999999999999999999999999999999999998875433  378898 99999999


Q ss_pred             chHHHHHHHHHHHcCCEEEEEeC-CccHHHHHHcCCceEEeCCChhH-HHHhc-CCccEEEECCCChhhHHHHHhcccCC
Q 021831          185 GAVGFAAVQFSVASGCHVSATCG-SKSIDRVLAAGAEQAVDYSSKDI-ELAIK-GKFDAVLDTIGAPETERLGLNFLKRG  261 (307)
Q Consensus       185 g~~G~~~~~~a~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~-~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~  261 (307)
                      |.+|++++++|+.+|++++.+++ .++.+.++++|++++++..+.+. ..... +++|+++|++|+. .+..++++++++
T Consensus       156 g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~  234 (323)
T TIGR02823       156 GGVGSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEKERWAGAVDTVGGH-TLANVLAQLKYG  234 (323)
T ss_pred             cHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEccccHHHHHHHhcCCCceEEEECccHH-HHHHHHHHhCCC
Confidence            99999999999999998887754 44556688899988888765432 11222 4699999999987 789999999999


Q ss_pred             cEEEEeccC
Q 021831          262 GHYMTLHGE  270 (307)
Q Consensus       262 G~~v~~g~~  270 (307)
                      |+++.+|..
T Consensus       235 G~~v~~g~~  243 (323)
T TIGR02823       235 GAVAACGLA  243 (323)
T ss_pred             CEEEEEccc
Confidence            999999864

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=1.1e-30  Score=238.76  Aligned_cols=239  Identities=27%  Similarity=0.375  Sum_probs=199.4

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccc---------cCCCCCcccccceEEE
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSI---------FEPLLPLILGRDISGE   99 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~---------~~~~~p~~~G~e~~G~   99 (307)
                      ||++.+..++.+  ++++ +.+.|++.++||+|++.++++|++|+....|..+..         ....+|.++|||++|+
T Consensus         1 ~~a~~~~~~~~~--~~~~-~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~   77 (350)
T cd08240           1 MKAAAVVEPGKP--LEEV-EIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGE   77 (350)
T ss_pred             CeeEEeccCCCC--ceEE-ecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEE
Confidence            789999876654  7888 899999999999999999999999999888743210         0224567899999999


Q ss_pred             EEEecCCCCCCCCCCEEEEecCCC-----------------------CCCCcceeEEEecCCceeeCCCCCChhhhcccc
Q 021831          100 VAAVGASVRSLTVGQEVFGALHPT-----------------------AVRGTYADYAVLSEDELTPKPVSVTHADASAIP  156 (307)
Q Consensus       100 V~~~G~~v~~~~~Gd~V~~~~~~~-----------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~  156 (307)
                      |+++|++++++++||+|+++....                       ...|+|++|+.++.+.++++|+++++.+++.+.
T Consensus        78 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~  157 (350)
T cd08240          78 VVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLA  157 (350)
T ss_pred             EEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhh
Confidence            999999999999999998863210                       024899999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHh
Q 021831          157 FAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAI  234 (307)
Q Consensus       157 ~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~  234 (307)
                      +.+.+||+++.....++++++|+|+| +|.+|++++++|+.+|+ +|+++.++ ++...++++|.+.+++..+.++.+.+
T Consensus       158 ~~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  236 (350)
T cd08240         158 CSGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAKRI  236 (350)
T ss_pred             chhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCCccHHHHH
Confidence            99999999998777777899999997 69999999999999999 67777554 45566788999888887765544333


Q ss_pred             c----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          235 K----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       235 ~----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .    +++|++||++|....+..++++|+++|+++.+|...
T Consensus       237 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~  277 (350)
T cd08240         237 IKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFG  277 (350)
T ss_pred             HHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCC
Confidence            2    479999999997668899999999999999998653

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=99.98  E-value=2.2e-30  Score=236.28  Aligned_cols=236  Identities=29%  Similarity=0.421  Sum_probs=200.5

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||+|++..++.+  +.+. +.+.|.+.+++|+|++.++++|++|+....|...   ...+|.++|+|++|+|+++|+++.
T Consensus         1 m~a~~~~~~~~~--~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~---~~~~~~~~g~e~~G~V~~~G~~~~   74 (345)
T cd08260           1 MRAAVYEEFGEP--LEIR-EVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDP---DVTLPHVPGHEFAGVVVEVGEDVS   74 (345)
T ss_pred             CeeEEEecCCCC--cEEE-EccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCC---CCCCCeeeccceeEEEEEECCCCc
Confidence            799999877755  7777 8888999999999999999999999998888532   235578999999999999999999


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEEecCC--ceeeCCCCCChhhhccccchHHHHH
Q 021831          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSED--ELTPKPVSVTHADASAIPFAALTAW  163 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~ta~  163 (307)
                      .+++||+|++....                       ...+|+|++|+.++..  .++++|+++++++++.+..++.+||
T Consensus        75 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~  154 (345)
T cd08260          75 RWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAF  154 (345)
T ss_pred             cCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHH
Confidence            99999999861100                       1125899999999974  8999999999999999999999999


Q ss_pred             HHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCC-hhHHHHhc----CC
Q 021831          164 RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSS-KDIELAIK----GK  237 (307)
Q Consensus       164 ~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~-~~~~~~~~----~~  237 (307)
                      +++.....+.++++|+|+| .|.+|++++++|+.+|++|+++.++ ++.+.++++|+++++++.+ .++.+.+.    ++
T Consensus       155 ~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~  233 (345)
T cd08260         155 RALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGGG  233 (345)
T ss_pred             HHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHHHhCCC
Confidence            9987788899999999999 6999999999999999999888554 5566788899999998876 55544433    37


Q ss_pred             ccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       238 ~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +|++||++|+...+..++++++++|+++.+|...
T Consensus       234 ~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~  267 (345)
T cd08260         234 AHVSVDALGIPETCRNSVASLRKRGRHVQVGLTL  267 (345)
T ss_pred             CCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcC
Confidence            9999999997558889999999999999998653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=99.98  E-value=1.5e-30  Score=239.14  Aligned_cols=234  Identities=28%  Similarity=0.395  Sum_probs=199.3

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||+|+++.++.+  ++++ +.+.|++.++||+|++.++++|++|+....|..    ...+|.++|+|++|+|+++|++++
T Consensus         1 m~a~~~~~~~~~--~~~~-~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~----~~~~~~~~g~e~~G~V~~vG~~v~   73 (363)
T cd08279           1 MRAAVLHEVGKP--LEIE-EVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDL----PAPLPAVLGHEGAGVVEEVGPGVT   73 (363)
T ss_pred             CeEEEEecCCCC--ceEE-EeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCC----CCCCCccccccceEEEEEeCCCcc
Confidence            789999987654  7788 888999999999999999999999999888843    235677899999999999999999


Q ss_pred             CCCCCCEEEEecCCC-------------------------------------------CCCCcceeEEEecCCceeeCCC
Q 021831          109 SLTVGQEVFGALHPT-------------------------------------------AVRGTYADYAVLSEDELTPKPV  145 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~~-------------------------------------------~~~g~~~~~~~~~~~~~~~ip~  145 (307)
                      .+++||+|++.....                                           ...|+|++|+.++.+.++++|+
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~  153 (363)
T cd08279          74 GVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDD  153 (363)
T ss_pred             ccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCC
Confidence            999999998842100                                           1248999999999999999999


Q ss_pred             CCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCc-cHHHHHHcCCceEE
Q 021831          146 SVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSK-SIDRVLAAGAEQAV  223 (307)
Q Consensus       146 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~-Vi~~~~~~-~~~~~~~~g~~~v~  223 (307)
                      ++++++++.+++.+.+||+.+.....+++|++|||+| .|.+|++++++++..|++ |+.+.+++ +.+.++++|+++++
T Consensus       154 ~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv  232 (363)
T cd08279         154 DIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTV  232 (363)
T ss_pred             CCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEe
Confidence            9999999999999999999987788899999999996 599999999999999995 88886554 45567889999999


Q ss_pred             eCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          224 DYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       224 ~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      +....++.+.+.     +++|+++|++++...+..++++++++|+++.+|..
T Consensus       233 ~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~  284 (363)
T cd08279         233 NASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMG  284 (363)
T ss_pred             CCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecC
Confidence            887655544432     46999999999766889999999999999999854

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=99.98  E-value=1.9e-30  Score=221.55  Aligned_cols=230  Identities=24%  Similarity=0.347  Sum_probs=191.7

Q ss_pred             eEEEEccc--CC--CceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEE--e
Q 021831           30 RAVVLPRF--GG--PEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAA--V  103 (307)
Q Consensus        30 ka~~~~~~--~~--~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~--~  103 (307)
                      +.|++.++  |.  +++|+++ +.++|+|+++|||||++|.+++|.    ++|.+.....-..|+-+|-..+|-++.  +
T Consensus        10 ~~~~la~rP~g~p~~d~F~le-e~~vp~p~~GqvLl~~~ylS~DPy----mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv   84 (340)
T COG2130          10 RRIVLASRPEGAPVPDDFRLE-EVDVPEPGEGQVLLRTLYLSLDPY----MRGRMSDAPSYAPPVELGEVMVGGTVAKVV   84 (340)
T ss_pred             heeeeccCCCCCCCCCCceeE-eccCCCCCcCceEEEEEEeccCHH----HeecccCCcccCCCcCCCceeECCeeEEEE
Confidence            56666644  32  3679999 999999999999999999999994    445443333445677788777764443  2


Q ss_pred             cCCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCCh--hhhccccchHHHHHHHHHHHcCCCCCCEEEEE
Q 021831          104 GASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTH--ADASAIPFAALTAWRALKCAARMSEGQRLLVL  181 (307)
Q Consensus       104 G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~--~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~  181 (307)
                      -|+..+|++||.|.+.       .+|++|..++.+.+.++.+..-+  .....+.++..|||.+|.+..+.++|++|+|.
T Consensus        85 ~S~~~~f~~GD~V~~~-------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVS  157 (340)
T COG2130          85 ASNHPGFQPGDIVVGV-------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVS  157 (340)
T ss_pred             ecCCCCCCCCCEEEec-------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEE
Confidence            3678889999999887       78999999999999999865322  23456678999999999999999999999999


Q ss_pred             cCCchHHHHHHHHHHHcCCEEEEEeCCccH-HHHHH-cCCceEEeCCChhHHHHhc----CCccEEEECCCChhhHHHHH
Q 021831          182 GGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLA-AGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGL  255 (307)
Q Consensus       182 Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~~~-~g~~~v~~~~~~~~~~~~~----~~~dvvid~~g~~~~~~~~~  255 (307)
                      +|+|++|..+.|+||..|++|++++.++++ +++.+ +|++.++||..+++.+.+.    .++|+.||++|+. .++..+
T Consensus       158 aAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfeNVGg~-v~DAv~  236 (340)
T COG2130         158 AAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGE-VLDAVL  236 (340)
T ss_pred             ecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEEcCCch-HHHHHH
Confidence            999999999999999999999999877665 55665 9999999999999888876    5899999999999 999999


Q ss_pred             hcccCCcEEEEeccCcc
Q 021831          256 NFLKRGGHYMTLHGETA  272 (307)
Q Consensus       256 ~~l~~~G~~v~~g~~~~  272 (307)
                      ..|+..+|++.||..+.
T Consensus       237 ~~ln~~aRi~~CG~IS~  253 (340)
T COG2130         237 PLLNLFARIPVCGAISQ  253 (340)
T ss_pred             Hhhccccceeeeeehhh
Confidence            99999999999997654

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=99.98  E-value=2.7e-30  Score=235.77  Aligned_cols=234  Identities=21%  Similarity=0.298  Sum_probs=196.3

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCC-CCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v  107 (307)
                      ||++++..++   .++++ +.+.|+| .++||+|++.++++|++|+.++.|....   ..+|.++|||++|+|+++|+++
T Consensus         1 m~a~~~~~~~---~~~~~-~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~v   73 (345)
T cd08286           1 MKALVYHGPG---KISWE-DRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT---VTPGRILGHEGVGVVEEVGSAV   73 (345)
T ss_pred             CceEEEecCC---ceeEE-ecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCC---CCCCceecccceEEEEEeccCc
Confidence            6889998544   48888 8999886 7999999999999999999999885432   2447899999999999999999


Q ss_pred             CCCCCCCEEEEecCC------------------------CCCCCcceeEEEecCC--ceeeCCCCCChhhhccccchHHH
Q 021831          108 RSLTVGQEVFGALHP------------------------TAVRGTYADYAVLSED--ELTPKPVSVTHADASAIPFAALT  161 (307)
Q Consensus       108 ~~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~t  161 (307)
                      +.+++||+|+.....                        ...+|+|++|+.++.+  .++++|++++..+++.+...+++
T Consensus        74 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~t  153 (345)
T cd08286          74 TNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPT  153 (345)
T ss_pred             cccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHH
Confidence            999999999875321                        1124899999999987  89999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc----
Q 021831          162 AWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK----  235 (307)
Q Consensus       162 a~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~----  235 (307)
                      ||+++.....+++|++|||.|+ |.+|++++|+++.+| .+|+++.++ ++...++++|+++++++...++.+.+.    
T Consensus       154 a~~~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~  232 (345)
T cd08286         154 GYECGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELTD  232 (345)
T ss_pred             HHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHHHHHhC
Confidence            9998766788999999999885 999999999999999 688887444 345667889999999887655444332    


Q ss_pred             -CCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          236 -GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       236 -~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                       .++|++||++|+...+..++++|+++|+++.+|..
T Consensus       233 ~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~  268 (345)
T cd08286         233 GRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVH  268 (345)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHhccCCcEEEEeccc
Confidence             37999999999866888899999999999999854

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=99.98  E-value=2.1e-30  Score=235.68  Aligned_cols=233  Identities=24%  Similarity=0.291  Sum_probs=193.4

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++++++++...+  ++ +.+.|.+.++||+|+|.++++|++|+....|...    ...|.++|||++|+|+++|++++
T Consensus         1 mka~~~~~~~~~~~--~~-~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~~G~~v~   73 (338)
T PRK09422          1 MKAAVVNKDHTGDV--VV-EKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFG----DKTGRILGHEGIGIVKEVGPGVT   73 (338)
T ss_pred             CeEEEecCCCCCce--EE-EecCCCCCCCeEEEEEEEEeechhHHHHHcCCCC----CCCCccCCcccceEEEEECCCCc
Confidence            78999997665422  66 8889999999999999999999999998887431    23467899999999999999999


Q ss_pred             CCCCCCEEEEecC------------------------CCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHH
Q 021831          109 SLTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (307)
Q Consensus       109 ~~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (307)
                      .|++||+|++.+.                        +...+|+|++|+.++.+.++++|+++++.+++.++..+.|||+
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~  153 (338)
T PRK09422         74 SLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYK  153 (338)
T ss_pred             cCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHH
Confidence            9999999986210                        0112589999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEeCC-ccHHHHHHcCCceEEeCCC-hhHHHHhc---CCc
Q 021831          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVA-SGCHVSATCGS-KSIDRVLAAGAEQAVDYSS-KDIELAIK---GKF  238 (307)
Q Consensus       165 ~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~-~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~-~~~~~~~~---~~~  238 (307)
                      ++ ....+++|++|||+| .|++|++++++|+. +|++|+++.++ ++.+.++++|.+.++++.. .++.+.+.   +++
T Consensus       154 ~~-~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~~~  231 (338)
T PRK09422        154 AI-KVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTGGA  231 (338)
T ss_pred             HH-HhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHHhcCCC
Confidence            98 578899999999999 59999999999998 59999988654 5567788999999988754 34433332   568


Q ss_pred             cEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       239 dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      |++|++.++...+..++++++++|+++.+|..
T Consensus       232 d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~  263 (338)
T PRK09422        232 HAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLP  263 (338)
T ss_pred             cEEEEeCCCHHHHHHHHHhccCCCEEEEEeeC
Confidence            95555555555899999999999999999865

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.98  E-value=2.7e-30  Score=231.38  Aligned_cols=223  Identities=30%  Similarity=0.427  Sum_probs=191.5

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||+|+++..+ +.+++++ +.+.|.+.++||+|++.++++|+.|+....+.       ..|.++|||++|+|+++|++++
T Consensus         1 ~~~~~~~~~~-~~~~~~~-~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~-------~~~~~~g~e~~G~v~~~G~~v~   71 (305)
T cd08270           1 MRALVVDPDA-PLRLRLG-EVPDPQPAPHEALVRVAAISLNRGELKFAAER-------PDGAVPGWDAAGVVERAAADGS   71 (305)
T ss_pred             CeEEEEccCC-CceeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHhhccC-------CCCCcccceeEEEEEEeCCCCC
Confidence            6899998765 7789998 88999999999999999999999999876531       2256899999999999999999


Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHH
Q 021831          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG  188 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G  188 (307)
                      .|++||+|+++..    +|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++...... +|++|+|+|++|.+|
T Consensus        72 ~~~~Gd~V~~~~~----~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g  146 (305)
T cd08270          72 GPAVGARVVGLGA----MGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVG  146 (305)
T ss_pred             CCCCCCEEEEecC----CcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHH
Confidence            9999999998752    39999999999999999999999999999999999999998766555 599999999999999


Q ss_pred             HHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEe
Q 021831          189 FAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       189 ~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~  267 (307)
                      ++++++++..|++|+.++++ ++.+.++++|++.+++... ++   ..+++|+++|++|+. .+..++++++++|+++.+
T Consensus       147 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~---~~~~~d~vl~~~g~~-~~~~~~~~l~~~G~~v~~  221 (305)
T cd08270         147 RFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVVVGGS-EL---SGAPVDLVVDSVGGP-QLARALELLAPGGTVVSV  221 (305)
T ss_pred             HHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEeccc-cc---cCCCceEEEECCCcH-HHHHHHHHhcCCCEEEEE
Confidence            99999999999999888664 4456678899876654322 11   114799999999988 789999999999999999


Q ss_pred             ccC
Q 021831          268 HGE  270 (307)
Q Consensus       268 g~~  270 (307)
                      |..
T Consensus       222 g~~  224 (305)
T cd08270         222 GSS  224 (305)
T ss_pred             ecc
Confidence            864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=99.98  E-value=7e-30  Score=229.44  Aligned_cols=235  Identities=24%  Similarity=0.382  Sum_probs=196.0

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||+|+++.. .+..++++ +.+.|++.++||+|++.++++|++|+....|..   .....|.++|+|++|+|+.+|++++
T Consensus         1 ~~~~~~~~~-~~~~~~~~-~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~---~~~~~p~~~G~e~~G~V~~vG~~v~   75 (306)
T cd08258           1 MKALVKTGP-GPGNVELR-EVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDY---DPVETPVVLGHEFSGTIVEVGPDVE   75 (306)
T ss_pred             CeeEEEecC-CCCceEEe-ecCCCCCCCCeEEEEEEEEEechhhHHHHcCCC---CcCCCCeeeccceEEEEEEECCCcC
Confidence            578888764 34678998 899999999999999999999999999888743   1234577899999999999999999


Q ss_pred             CCCCCCEEEEecCCC------------------------CCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHH
Q 021831          109 SLTVGQEVFGALHPT------------------------AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~~------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (307)
                      .+++||+|++.....                        ..+|+|++|+.++.+.++++|+++++.+++ +..++.++|+
T Consensus        76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~  154 (306)
T cd08258          76 GWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVH  154 (306)
T ss_pred             cCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHH
Confidence            999999998865210                        124899999999999999999999999887 6678889999


Q ss_pred             HHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-Cc--cHHHHHHcCCceEEeCCChhHHHHhc-----C
Q 021831          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SK--SIDRVLAAGAEQAVDYSSKDIELAIK-----G  236 (307)
Q Consensus       165 ~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~--~~~~~~~~g~~~v~~~~~~~~~~~~~-----~  236 (307)
                      ++.....+++|++|||.| +|.+|++++++|+.+|++|+.+.. ++  +...++++|++++ ++...++.+.+.     +
T Consensus       155 ~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~~~  232 (306)
T cd08258         155 AVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELVNEITDGD  232 (306)
T ss_pred             HHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcCCC
Confidence            988788999999999977 699999999999999999887733 22  3455788999888 776666555443     3


Q ss_pred             CccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          237 KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       237 ~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ++|++||++|+...+...+++|+++|+++.+|...
T Consensus       233 ~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  267 (306)
T cd08258         233 GADVVIECSGAVPALEQALELLRKGGRIVQVGIFG  267 (306)
T ss_pred             CCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccC
Confidence            79999999987668889999999999999999864

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=99.98  E-value=3e-30  Score=232.83  Aligned_cols=227  Identities=30%  Similarity=0.450  Sum_probs=196.2

Q ss_pred             cccCCCc--eeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCCCCCC
Q 021831           35 PRFGGPE--VLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTV  112 (307)
Q Consensus        35 ~~~~~~~--~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~  112 (307)
                      ++++.+.  .++++ +.+.|.+.+++|+|++.++++|+.|+..+.|....  ....|.++|||++|+|+++|++++.+++
T Consensus         4 ~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~   80 (323)
T cd05282           4 TQFGEPLPLVLELV-SLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGS--RPPLPAVPGNEGVGVVVEVGSGVSGLLV   80 (323)
T ss_pred             CcCCCCccceEEeE-eCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCC--CCCCCCcCCcceEEEEEEeCCCCCCCCC
Confidence            4445544  78888 78888899999999999999999999988774322  1245778999999999999999999999


Q ss_pred             CCEEEEec-CCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHH
Q 021831          113 GQEVFGAL-HPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAA  191 (307)
Q Consensus       113 Gd~V~~~~-~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~  191 (307)
                      ||+|++.. .     |+|++|+.++.+.++++|+++++.+++.+++.++++|+++.....+++|++|||+|++|.+|+++
T Consensus        81 Gd~V~~~~~~-----g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~  155 (323)
T cd05282          81 GQRVLPLGGE-----GTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRML  155 (323)
T ss_pred             CCEEEEeCCC-----CcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHH
Confidence            99999986 4     89999999999999999999999999999999999999988788889999999999999999999


Q ss_pred             HHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCCcEEE
Q 021831          192 VQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYM  265 (307)
Q Consensus       192 ~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v  265 (307)
                      +++|+.+|+++++++++ ++.+.++++|.++++++.+.++.+.+.     .++|++||++|+. ....++++++++|+++
T Consensus       156 ~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v  234 (323)
T cd05282         156 IQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGE-SATRLARSLRPGGTLV  234 (323)
T ss_pred             HHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCH-HHHHHHHhhCCCCEEE
Confidence            99999999999888655 455667889999999887655554443     3799999999998 5678899999999999


Q ss_pred             EeccC
Q 021831          266 TLHGE  270 (307)
Q Consensus       266 ~~g~~  270 (307)
                      .+|..
T Consensus       235 ~~g~~  239 (323)
T cd05282         235 NYGLL  239 (323)
T ss_pred             EEccC
Confidence            99854

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=99.97  E-value=5.5e-30  Score=230.45  Aligned_cols=234  Identities=30%  Similarity=0.479  Sum_probs=198.3

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++++...+....+++. +.+.|.+.++||+|++.++++|++|+....|...   ....|.++|||++|+|+++|+  .
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~vG~--~   74 (320)
T cd08243           1 MKAIVIEQPGGPEVLKLR-EIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSP---SVKFPRVLGIEAVGEVEEAPG--G   74 (320)
T ss_pred             CeEEEEcCCCCccceEEe-ecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC---CCCCCccccceeEEEEEEecC--C
Confidence            688999877766778887 7777889999999999999999999998887432   234578899999999999995  5


Q ss_pred             CCCCCCEEEEecCC--CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCch
Q 021831          109 SLTVGQEVFGALHP--TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGA  186 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~--~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~  186 (307)
                      .+++||+|++....  ...+|+|++|+.++.+.++++|+++++.+++.++.++.+||+++.....+++|++|||+|++|.
T Consensus        75 ~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~  154 (320)
T cd08243          75 TFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSS  154 (320)
T ss_pred             CCCCCCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCCh
Confidence            79999999987532  1235899999999999999999999999999999999999999987888999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHh---cCCccEEEECCCChhhHHHHHhcccCCc
Q 021831          187 VGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAI---KGKFDAVLDTIGAPETERLGLNFLKRGG  262 (307)
Q Consensus       187 ~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~---~~~~dvvid~~g~~~~~~~~~~~l~~~G  262 (307)
                      +|++++++|+.+|++|+++++++ +.+.++++|++++++. ..++.+.+   .+++|+++|++|+. .+..++++++++|
T Consensus       155 ~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~i~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~g  232 (320)
T cd08243         155 VGLAALKLAKALGATVTATTRSPERAALLKELGADEVVID-DGAIAEQLRAAPGGFDKVLELVGTA-TLKDSLRHLRPGG  232 (320)
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEec-CccHHHHHHHhCCCceEEEECCChH-HHHHHHHHhccCC
Confidence            99999999999999999886554 4566788999888754 33333332   24799999999986 8899999999999


Q ss_pred             EEEEeccC
Q 021831          263 HYMTLHGE  270 (307)
Q Consensus       263 ~~v~~g~~  270 (307)
                      +++.+|..
T Consensus       233 ~~v~~g~~  240 (320)
T cd08243         233 IVCMTGLL  240 (320)
T ss_pred             EEEEEccC
Confidence            99999863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=99.97  E-value=5.7e-30  Score=232.44  Aligned_cols=237  Identities=28%  Similarity=0.383  Sum_probs=200.9

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++.+..++.+. +.+. +.+.|.+.+++|+|++.++++|+.|.....|...  ....+|.++|+|++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~--~~~~~~~~~g~~~~G~v~~~G~~v~   76 (338)
T cd08254           1 MKAWRFHKGSKGL-LVLE-EVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVP--TLTKLPLTLGHEIAGTVVEVGAGVT   76 (338)
T ss_pred             CeeEEEecCCCCc-eEEe-ccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCc--ccCCCCEeccccccEEEEEECCCCc
Confidence            7899999887765 7777 8888899999999999999999999999888543  2245577899999999999999999


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHH
Q 021831          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (307)
                      .+++||+|++....                       ...+|+|++|+.++.+.++++|+++++.+++.+..++.+||++
T Consensus        77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~  156 (338)
T cd08254          77 NFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHA  156 (338)
T ss_pred             cCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHH
Confidence            99999999872110                       1124899999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHh---c-CCccE
Q 021831          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAI---K-GKFDA  240 (307)
Q Consensus       166 l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~---~-~~~dv  240 (307)
                      +.....++++++|||.| +|.+|++++++|+.+|++|++++++ ++.+.++++|.+++++..+..+.+.+   . +++|+
T Consensus       157 l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~D~  235 (338)
T cd08254         157 VVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFDV  235 (338)
T ss_pred             HHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHHHHhcCCCceE
Confidence            98788899999999986 5899999999999999998888654 44566788999888887765443322   2 47999


Q ss_pred             EEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          241 VLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       241 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ++|++|....+..++++|+++|+++.+|..
T Consensus       236 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  265 (338)
T cd08254         236 IFDFVGTQPTFEDAQKAVKPGGRIVVVGLG  265 (338)
T ss_pred             EEECCCCHHHHHHHHHHhhcCCEEEEECCC
Confidence            999999776889999999999999999854

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.97  E-value=5e-30  Score=233.37  Aligned_cols=234  Identities=26%  Similarity=0.327  Sum_probs=198.1

Q ss_pred             eEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCCC
Q 021831           30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS  109 (307)
Q Consensus        30 ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~  109 (307)
                      |+|+.+..+  ..+++. +.+.|+|.++||+|++.++++|++|+....|..   ....+|.++|||++|+|+++|+++++
T Consensus         1 ~~~~~~~~~--~~~~~~-~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~---~~~~~p~~~g~e~~G~V~~vG~~v~~   74 (337)
T cd05283           1 KGYAARDAS--GKLEPF-TFERRPLGPDDVDIKITYCGVCHSDLHTLRNEW---GPTKYPLVPGHEIVGIVVAVGSKVTK   74 (337)
T ss_pred             CceEEecCC--CCceEE-eccCCCCCCCeEEEEEEEecccchHHHHhcCCc---CCCCCCcccCcceeeEEEEECCCCcc
Confidence            567888765  558888 999999999999999999999999999988853   22356889999999999999999999


Q ss_pred             CCCCCEEEEec-C------------------------------CCCCCCcceeEEEecCCceeeCCCCCChhhhccccch
Q 021831          110 LTVGQEVFGAL-H------------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFA  158 (307)
Q Consensus       110 ~~~Gd~V~~~~-~------------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~  158 (307)
                      +++||+|+..+ .                              ....+|+|++|+.++.+.++++|+++++.+++.+.+.
T Consensus        75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~  154 (337)
T cd05283          75 FKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCA  154 (337)
T ss_pred             cCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhH
Confidence            99999997321 0                              0123589999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhcCC
Q 021831          159 ALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIKGK  237 (307)
Q Consensus       159 ~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~  237 (307)
                      +.+||+++.. ..+++|++++|.| .|.+|++++++++.+|++++.+.++ ++.+.++++|++++++....++.....++
T Consensus       155 ~~ta~~~~~~-~~~~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~  232 (337)
T cd05283         155 GITVYSPLKR-NGVGPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKKAAGS  232 (337)
T ss_pred             HHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhhhhccCC
Confidence            9999999864 4689999999977 6999999999999999998888665 45666788999999887765544444467


Q ss_pred             ccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       238 ~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +|++||++|+......++++++++|+++.+|...
T Consensus       233 ~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~  266 (337)
T cd05283         233 LDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPE  266 (337)
T ss_pred             ceEEEECCCCcchHHHHHHHhcCCCEEEEEeccC
Confidence            9999999998855899999999999999999653

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=99.97  E-value=2.7e-30  Score=233.29  Aligned_cols=237  Identities=36%  Similarity=0.537  Sum_probs=190.9

Q ss_pred             cceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCcccc-CCCCCcccccceEEEEEE---
Q 021831           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF-EPLLPLILGRDISGEVAA---  102 (307)
Q Consensus        27 ~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~-~~~~p~~~G~e~~G~V~~---  102 (307)
                      +.++.+.+..+.+..+..+.++.+.|.|.+++++|++.++++|+.|+.+..|+..+.+ ...+|.+.++++.|++..   
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~   82 (347)
T KOG1198|consen    3 KKIRRVSLVSPPGGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVES   82 (347)
T ss_pred             cccceEEEeccCCCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEec
Confidence            3455556665555555666658999999999999999999999999999999654332 124665566666655333   


Q ss_pred             ec-CCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHc------CCCCC
Q 021831          103 VG-ASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAA------RMSEG  175 (307)
Q Consensus       103 ~G-~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~------~~~~g  175 (307)
                      .| ..+..+..||.+....    .+|+|+||.++|...++++|+++++.++++++.++.|||.++....      ++++|
T Consensus        83 ~g~~~~~~~~~g~~~~~~~----~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g  158 (347)
T KOG1198|consen   83 VGDDVVGGWVHGDAVVAFL----SSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKG  158 (347)
T ss_pred             cccccccceEeeeEEeecc----CCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCC
Confidence            33 2233455555544443    3699999999999999999999999999999999999999999888      89999


Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhc----CCccEEEECCCChhh
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPET  250 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~----~~~dvvid~~g~~~~  250 (307)
                      ++|||+||+|++|++++|+|+..| ++|+++++.++.+.++++|+++++||+++++.+.+.    ++||+||||+|+. .
T Consensus       159 ~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg~~-~  237 (347)
T KOG1198|consen  159 KSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLDCVGGS-T  237 (347)
T ss_pred             CeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEECCCCC-c
Confidence            999999999999999999999999 477888888999999999999999999998888776    3899999999997 6


Q ss_pred             HHHHHhcccCCcEEEEec
Q 021831          251 ERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g  268 (307)
                      ......++..+|+...++
T Consensus       238 ~~~~~~~l~~~g~~~~i~  255 (347)
T KOG1198|consen  238 LTKSLSCLLKGGGGAYIG  255 (347)
T ss_pred             cccchhhhccCCceEEEE
Confidence            677777888777533333

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=99.97  E-value=2.7e-30  Score=234.56  Aligned_cols=231  Identities=28%  Similarity=0.434  Sum_probs=194.6

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||+++++++++  .++++ +.+.|.+.++|++|++.++++|++|+....|..+   ...+|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~~~--~~~~~-~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~---~~~~~~~~g~e~~G~v~~~g~~~~   74 (334)
T PRK13771          1 MKAVILPGFKQ--GYRIE-EVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYP---RMKYPVILGHEVVGTVEEVGENVK   74 (334)
T ss_pred             CeeEEEcCCCC--CcEEE-eCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCC---CCCCCeeccccceEEEEEeCCCCc
Confidence            68999987765  38888 8889999999999999999999999998887432   235578899999999999999998


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHH
Q 021831          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (307)
                      .+++||+|++....                       ...+|+|++|+.++.+.++++|+++++.+++.+.+.+.++|++
T Consensus        75 ~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~  154 (334)
T PRK13771         75 GFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRG  154 (334)
T ss_pred             cCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHH
Confidence            89999999986411                       0125899999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc--CCccEEE
Q 021831          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK--GKFDAVL  242 (307)
Q Consensus       166 l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~--~~~dvvi  242 (307)
                      +... .++++++|+|+|++|.+|++++++++.+|+++++++++ ++.+.++++ ++++++..  ++.+.+.  +++|+++
T Consensus       155 ~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~v~~~~~~d~~l  230 (334)
T PRK13771        155 LRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKY-ADYVIVGS--KFSEEVKKIGGADIVI  230 (334)
T ss_pred             HHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHhcCch--hHHHHHHhcCCCcEEE
Confidence            8755 88999999999999999999999999999999888654 445556666 66666654  3333322  4799999


Q ss_pred             ECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          243 DTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       243 d~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      |++|+. ....++++++++|+++.+|..
T Consensus       231 d~~g~~-~~~~~~~~l~~~G~~v~~g~~  257 (334)
T PRK13771        231 ETVGTP-TLEESLRSLNMGGKIIQIGNV  257 (334)
T ss_pred             EcCChH-HHHHHHHHHhcCCEEEEEecc
Confidence            999987 788999999999999999964

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=99.97  E-value=5.2e-30  Score=233.57  Aligned_cols=236  Identities=25%  Similarity=0.329  Sum_probs=191.2

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||+|++.+++  +.+++. +.+.|.|+++||+||+.++++|++|+.++.+.........+|.++|||++|+|+++|++++
T Consensus         1 ~~~~~~~~~~--~~~~~~-~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~   77 (341)
T PRK05396          1 MKALVKLKAE--PGLWLT-DVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVT   77 (341)
T ss_pred             CceEEEecCC--CceEEE-ECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCC
Confidence            6899998765  458888 8999999999999999999999999998766321111234677899999999999999999


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHH
Q 021831          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (307)
                      ++++||+|++....                       ...+|+|++|+.++.+.++++|+++++.+++.+ .++.++++.
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~  156 (341)
T PRK05396         78 GFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHT  156 (341)
T ss_pred             cCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHH
Confidence            99999999876211                       113589999999999999999999999888744 566666665


Q ss_pred             HHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc-----CCc
Q 021831          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK-----GKF  238 (307)
Q Consensus       166 l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~  238 (307)
                      ...  ...+|++|+|.| .|.+|++++++|+.+|+ +|+++.++ ++.+.++++|++++++++..++.+.+.     +++
T Consensus       157 ~~~--~~~~g~~vlV~~-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  233 (341)
T PRK05396        157 ALS--FDLVGEDVLITG-AGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGF  233 (341)
T ss_pred             HHc--CCCCCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCCC
Confidence            532  346899999987 59999999999999999 67777544 445668889999999887766555443     479


Q ss_pred             cEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       239 dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      |++|||.|....+..++++++++|+++.+|...
T Consensus       234 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  266 (341)
T PRK05396        234 DVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPP  266 (341)
T ss_pred             CEEEECCCCHHHHHHHHHHHhcCCEEEEEecCC
Confidence            999999998768899999999999999998653

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=99.97  E-value=6.5e-30  Score=233.02  Aligned_cols=232  Identities=25%  Similarity=0.389  Sum_probs=192.9

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCC-CCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v  107 (307)
                      ||+|+++.+   ..++++ +.++|+|. ++||+|++.++++|++|+....|..    ....|.++|+|++|+|+++|+++
T Consensus         1 ~~a~~~~~~---~~~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~----~~~~~~~~g~e~~G~V~~vG~~v   72 (344)
T cd08284           1 MKAVVFKGP---GDVRVE-EVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHI----PSTPGFVLGHEFVGEVVEVGPEV   72 (344)
T ss_pred             CeeEEEecC---CCceEE-eccCCCCCCCCeEEEEEEEeeccccchhhhcCCC----CCCCCcccccceEEEEEeeCCCc
Confidence            688999853   468888 89999885 9999999999999999999887743    23457789999999999999999


Q ss_pred             CCCCCCCEEEEecCCC---------------------------CCCCcceeEEEecCC--ceeeCCCCCChhhhccccch
Q 021831          108 RSLTVGQEVFGALHPT---------------------------AVRGTYADYAVLSED--ELTPKPVSVTHADASAIPFA  158 (307)
Q Consensus       108 ~~~~~Gd~V~~~~~~~---------------------------~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~  158 (307)
                      +.+++||+|++....+                           ..+|+|++|+.++.+  .++++|+++++++++.++.+
T Consensus        73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~  152 (344)
T cd08284          73 RTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDI  152 (344)
T ss_pred             cccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCc
Confidence            9999999999864211                           125899999999964  99999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc-
Q 021831          159 ALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK-  235 (307)
Q Consensus       159 ~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~-  235 (307)
                      +.+||+++. ...+++|++|||+| +|.+|++++++|+.+|+ +|+++.+. ++...++++|+. .++....++.+.+. 
T Consensus       153 ~~ta~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~l~~  229 (344)
T cd08284         153 LPTGYFGAK-RAQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFEDAEPVERVRE  229 (344)
T ss_pred             hHHHHhhhH-hcCCccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCCcCHHHHHHH
Confidence            999999996 57889999999997 69999999999999997 88888544 345557788875 45655544444332 


Q ss_pred             ----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          236 ----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       236 ----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                          +++|++||++|+...+..++++++++|+++.+|...
T Consensus       230 ~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~  269 (344)
T cd08284         230 ATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHT  269 (344)
T ss_pred             HhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCC
Confidence                479999999998668899999999999999999654

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=99.97  E-value=6.4e-30  Score=236.85  Aligned_cols=234  Identities=22%  Similarity=0.299  Sum_probs=194.4

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCC-CCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v  107 (307)
                      ||++++..   ++.++++ +.+.|.|. +++|+|++.++++|++|+..+.|....   ..+|.++|||++|+|+++|+++
T Consensus         1 m~a~~~~~---~~~~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v   73 (386)
T cd08283           1 MKALVWHG---KGDVRVE-EVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG---MKKGDILGHEFMGVVEEVGPEV   73 (386)
T ss_pred             CeeEEEec---CCCceEE-eCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC---CCCCccccccceEEEEEeCCCC
Confidence            78999883   4568888 88889884 999999999999999999999885432   3468899999999999999999


Q ss_pred             CCCCCCCEEEEecCCC-------------------------------------------CCCCcceeEEEecCC--ceee
Q 021831          108 RSLTVGQEVFGALHPT-------------------------------------------AVRGTYADYAVLSED--ELTP  142 (307)
Q Consensus       108 ~~~~~Gd~V~~~~~~~-------------------------------------------~~~g~~~~~~~~~~~--~~~~  142 (307)
                      +++++||+|++.+...                                           ..+|+|++|+.++.+  .+++
T Consensus        74 ~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~  153 (386)
T cd08283          74 RNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFK  153 (386)
T ss_pred             CCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEE
Confidence            9999999998854100                                           125899999999987  8999


Q ss_pred             CCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCCc
Q 021831          143 KPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGAE  220 (307)
Q Consensus       143 ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~~  220 (307)
                      +|+++++++++.++..+++||+++ ....+++|++|||+| +|.+|++++++|+.+|+ +++++.++ ++.+.+++++..
T Consensus       154 lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g-~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~  231 (386)
T cd08283         154 IPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWG-CGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGA  231 (386)
T ss_pred             CCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCc
Confidence            999999999999999999999999 688999999999997 59999999999999998 68888554 455667777444


Q ss_pred             eEEeCCCh-hHHHHhc-----CCccEEEECCCCh---------------------hhHHHHHhcccCCcEEEEeccCc
Q 021831          221 QAVDYSSK-DIELAIK-----GKFDAVLDTIGAP---------------------ETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       221 ~v~~~~~~-~~~~~~~-----~~~dvvid~~g~~---------------------~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .++++... ++.+.+.     +++|++||++|+.                     ..+..++++++++|+++.+|...
T Consensus       232 ~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~  309 (386)
T cd08283         232 ETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYG  309 (386)
T ss_pred             EEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCC
Confidence            67776655 3554443     2799999999753                     36788999999999999998653

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=1.2e-29  Score=229.99  Aligned_cols=237  Identities=32%  Similarity=0.442  Sum_probs=202.3

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||||++++.+..+.++++ +.+.|.++++|++|++.++++|++|+....|....  ....|.++|||++|+|+++|++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~G~~~~   77 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLV-EEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPP--PVKDPLIPLSDGAGEVVAVGEGVT   77 (336)
T ss_pred             CeEEEEeccCCCcceEEE-eccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCC--CCCCCcccccceeEEEEEeCCCCc
Confidence            799999988767788988 88888899999999999999999999988774322  223678899999999999999999


Q ss_pred             CCCCCCEEEEecC-----------------CCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcC
Q 021831          109 SLTVGQEVFGALH-----------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAAR  171 (307)
Q Consensus       109 ~~~~Gd~V~~~~~-----------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~  171 (307)
                      ++++||+|++...                 ....+|+|++|+.++.+.++++|+++++.+++.+..++.+||+++.....
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~  157 (336)
T cd08276          78 RFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGP  157 (336)
T ss_pred             CCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcC
Confidence            9999999998652                 11125889999999999999999999999999999999999999887788


Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCC-hhHHHHhc-----CCccEEEEC
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSS-KDIELAIK-----GKFDAVLDT  244 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~-~~~~~~~~-----~~~dvvid~  244 (307)
                      +++|++|+|+| +|++|++++++++.+|++|+.+.+++ +.+.+.++|.+++++... .++.+.+.     .++|++||+
T Consensus       158 ~~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~  236 (336)
T cd08276         158 LKPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEV  236 (336)
T ss_pred             CCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEEC
Confidence            99999999996 69999999999999999998886654 456677789999988766 44544433     379999999


Q ss_pred             CCChhhHHHHHhcccCCcEEEEeccC
Q 021831          245 IGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       245 ~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ++.. .+..++++++++|+++.+|..
T Consensus       237 ~~~~-~~~~~~~~l~~~G~~v~~g~~  261 (336)
T cd08276         237 GGPG-TLAQSIKAVAPGGVISLIGFL  261 (336)
T ss_pred             CChH-HHHHHHHhhcCCCEEEEEccC
Confidence            9876 788999999999999999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=1e-29  Score=230.22  Aligned_cols=234  Identities=32%  Similarity=0.520  Sum_probs=201.7

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      .|+|.+.+.+.+.+++++ +.+.|.|.++||+|++.++++|++|+.+..|.....  ..+|.++|||++|+|+.+|+++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~vG~~v~   77 (331)
T cd08273           1 NREVVVTRRGGPEVLKVV-EADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQ--PPLPFTPGYDLVGRVDALGSGVT   77 (331)
T ss_pred             CeeEEEccCCCcccEEEe-ccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCC--CCCCcccccceEEEEEEeCCCCc
Confidence            478999998888899999 889999999999999999999999999888754322  24688999999999999999999


Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHH
Q 021831          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG  188 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G  188 (307)
                      .+++||+|.+...    +|+|++|+.++.+.++++|+++++.+++.++.++.++|+++.....+++|++|+|+|++|.+|
T Consensus        78 ~~~~Gd~V~~~~~----~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig  153 (331)
T cd08273          78 GFEVGDRVAALTR----VGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVG  153 (331)
T ss_pred             cCCCCCEEEEeCC----CcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHH
Confidence            9999999998753    389999999999999999999999999999999999999998778899999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHH-hc-CCccEEEECCCChhhHHHHHhcccCCcEEEE
Q 021831          189 FAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA-IK-GKFDAVLDTIGAPETERLGLNFLKRGGHYMT  266 (307)
Q Consensus       189 ~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~-~~-~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~  266 (307)
                      ++++++++.+|++|+.+++.++...++++|+.. ++....++.+. .. +++|+++|++|+. ....++++++++|+++.
T Consensus       154 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~  231 (331)
T cd08273         154 QALLELALLAGAEVYGTASERNHAALRELGATP-IDYRTKDWLPAMLTPGGVDVVFDGVGGE-SYEESYAALAPGGTLVC  231 (331)
T ss_pred             HHHHHHHHHcCCEEEEEeCHHHHHHHHHcCCeE-EcCCCcchhhhhccCCCceEEEECCchH-HHHHHHHHhcCCCEEEE
Confidence            999999999999999887744556677888654 44443333321 22 5799999999998 58899999999999999


Q ss_pred             eccCc
Q 021831          267 LHGET  271 (307)
Q Consensus       267 ~g~~~  271 (307)
                      +|...
T Consensus       232 ~g~~~  236 (331)
T cd08273         232 YGGNS  236 (331)
T ss_pred             EccCC
Confidence            99764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=1.1e-29  Score=229.95  Aligned_cols=232  Identities=30%  Similarity=0.449  Sum_probs=197.2

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++++..+  ++.+.++ +.+.|.+.+++|+|++.++++|++|+....|..+   ....|.++|||++|+|+++|++++
T Consensus         1 m~a~~~~~~--~~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~---~~~~~~~~g~e~~G~v~~~G~~v~   74 (332)
T cd08259           1 MKAAILHKP--NKPLQIE-EVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFP---RGKYPLILGHEIVGTVEEVGEGVE   74 (332)
T ss_pred             CeEEEEecC--CCceEEE-EccCCCCCCCeEEEEEEEEecchhhhHHhcCCCC---CCCCCeeccccceEEEEEECCCCc
Confidence            689999863  3468888 8899999999999999999999999999888432   234578999999999999999999


Q ss_pred             CCCCCCEEEEecCCC-----------------------CCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHH
Q 021831          109 SLTVGQEVFGALHPT-----------------------AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~~-----------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (307)
                      .+++||+|++.....                       ...|+|++|+.++.+.++++|+++++++++.++.++.+||++
T Consensus        75 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~  154 (332)
T cd08259          75 RFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHA  154 (332)
T ss_pred             cCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHH
Confidence            999999999875210                       124899999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc--CCccEEE
Q 021831          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK--GKFDAVL  242 (307)
Q Consensus       166 l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~--~~~dvvi  242 (307)
                      +.. ..+++++++||+|++|.+|++++++++..|++|++++++ ++.+.+.+++.+++++...  +.+.+.  .++|+++
T Consensus       155 l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~v~  231 (332)
T cd08259         155 LKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSK--FSEDVKKLGGADVVI  231 (332)
T ss_pred             HHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEEecHH--HHHHHHhccCCCEEE
Confidence            976 889999999999999999999999999999999888665 4455577788887776543  434333  3799999


Q ss_pred             ECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          243 DTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       243 d~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      |++|.. ....++++++++|+++.+|..
T Consensus       232 ~~~g~~-~~~~~~~~~~~~g~~v~~g~~  258 (332)
T cd08259         232 ELVGSP-TIEESLRSLNKGGRLVLIGNV  258 (332)
T ss_pred             ECCChH-HHHHHHHHhhcCCEEEEEcCC
Confidence            999988 688899999999999999864

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=99.97  E-value=1.7e-29  Score=229.41  Aligned_cols=236  Identities=31%  Similarity=0.424  Sum_probs=200.5

Q ss_pred             eeEEEEcccCCCc---eeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecC
Q 021831           29 CRAVVLPRFGGPE---VLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (307)
Q Consensus        29 ~ka~~~~~~~~~~---~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~  105 (307)
                      ||+++++.++++.   .++++ +.+.|.+.+++|+|++.++++|++|+....|..+   ....|.++|||++|+|+++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~~G~   76 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDI-ELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAP---VPGQPKILGWDASGVVEAVGS   76 (336)
T ss_pred             CceEEecCCCCCCcccceeEc-cCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCC---CCCCCcccccceEEEEEEcCC
Confidence            5789999887765   47777 8888889999999999999999999998777432   234567899999999999999


Q ss_pred             CCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCC-----CCEEEE
Q 021831          106 SVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE-----GQRLLV  180 (307)
Q Consensus       106 ~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----g~~VlI  180 (307)
                      ++..+++||+|++.... ..+|+|++|+.++.+.++++|+++++.+++.+++.+.++|+++.....+.+     |++|+|
T Consensus        77 ~v~~~~~Gd~V~~~~~~-~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV  155 (336)
T cd08252          77 EVTLFKVGDEVYYAGDI-TRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLI  155 (336)
T ss_pred             CCCCCCCCCEEEEcCCC-CCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEE
Confidence            99999999999876321 124899999999999999999999999999999999999999877788877     999999


Q ss_pred             EcCCchHHHHHHHHHHHcC-CEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHh---c-CCccEEEECCCChhhHHHH
Q 021831          181 LGGGGAVGFAAVQFSVASG-CHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAI---K-GKFDAVLDTIGAPETERLG  254 (307)
Q Consensus       181 ~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~---~-~~~dvvid~~g~~~~~~~~  254 (307)
                      +|+.|.+|++++++++.+| ++|+++++. ++...++++|.+++++... ++.+.+   . +++|++||++|+...+..+
T Consensus       156 ~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~  234 (336)
T cd08252         156 IGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQ-DLAEQLEALGIEPVDYIFCLTDTDQHWDAM  234 (336)
T ss_pred             EcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCcEEEeCCc-cHHHHHHhhCCCCCCEEEEccCcHHHHHHH
Confidence            9988999999999999999 899988654 5566788899998988764 333322   2 4799999999976588999


Q ss_pred             HhcccCCcEEEEeccC
Q 021831          255 LNFLKRGGHYMTLHGE  270 (307)
Q Consensus       255 ~~~l~~~G~~v~~g~~  270 (307)
                      +++++++|+++.+|..
T Consensus       235 ~~~l~~~g~~v~~g~~  250 (336)
T cd08252         235 AELIAPQGHICLIVDP  250 (336)
T ss_pred             HHHhcCCCEEEEecCC
Confidence            9999999999999865

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=1.6e-29  Score=227.66  Aligned_cols=237  Identities=38%  Similarity=0.622  Sum_probs=203.4

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++++..++.++.++++ +.+.|.+.+++|+|++.++++|++|+.+..|...  .....|.++|||++|+|+.+|++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~v~~~G~~~~   77 (326)
T cd08272           1 MKALVLESFGGPEVFELR-EVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAA--ARPPLPAILGCDVAGVVEAVGEGVT   77 (326)
T ss_pred             CeEEEEccCCCchheEEe-ecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCC--CCCCCCcccccceeEEEEEeCCCCC
Confidence            789999988887788888 7788888999999999999999999998877432  1223477899999999999999999


Q ss_pred             CCCCCCEEEEecCCCC-CCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchH
Q 021831          109 SLTVGQEVFGALHPTA-VRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV  187 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~~~-~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~  187 (307)
                      ++++||+|+++..... ..|+|++|+.++.+.++++|+++++.+++.++..+.++|+++.....+++|++++|+|+++.+
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~  157 (326)
T cd08272          78 RFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGV  157 (326)
T ss_pred             CCCCCCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcH
Confidence            9999999998752111 248999999999999999999999999999999999999998778899999999999999999


Q ss_pred             HHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCCc
Q 021831          188 GFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGG  262 (307)
Q Consensus       188 G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G  262 (307)
                      |++++++++.+|++|+.+++.++.+.++++|.+.+++.... +...+.     .++|+++|++|+. ....++.+++++|
T Consensus       158 g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g  235 (326)
T cd08272         158 GHVAVQLAKAAGARVYATASSEKAAFARSLGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTVGGE-TLDASFEAVALYG  235 (326)
T ss_pred             HHHHHHHHHHcCCEEEEEechHHHHHHHHcCCCEEEecchh-HHHHHHHhcCCCCCcEEEECCChH-HHHHHHHHhccCC
Confidence            99999999999999988866655666788999888887655 444333     3699999999987 7888999999999


Q ss_pred             EEEEeccC
Q 021831          263 HYMTLHGE  270 (307)
Q Consensus       263 ~~v~~g~~  270 (307)
                      +++.+|..
T Consensus       236 ~~v~~~~~  243 (326)
T cd08272         236 RVVSILGG  243 (326)
T ss_pred             EEEEEecC
Confidence            99998854

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=1.3e-29  Score=230.57  Aligned_cols=231  Identities=26%  Similarity=0.386  Sum_probs=194.0

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||+|.++.+   +.+.+. +.++|.+.++|++|+|.++++|+.|+....|....   ..+|.++|+|++|+|+.+|++++
T Consensus         1 ~~a~~~~~~---~~~~~~-~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~---~~~~~~~g~e~~G~V~~~G~~v~   73 (337)
T cd08261           1 MKALVCEKP---GRLEVV-DIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPF---ASYPRILGHELSGEVVEVGEGVA   73 (337)
T ss_pred             CeEEEEeCC---CceEEE-ECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCc---CCCCcccccccEEEEEEeCCCCC
Confidence            688999854   468888 88999999999999999999999999988874322   24477899999999999999999


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHH
Q 021831          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (307)
                      .+++||+|++....                       ....|+|++|+.++.+ ++++|+++++++++.+ ..+.+++++
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~  151 (337)
T cd08261          74 GLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHA  151 (337)
T ss_pred             CCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHH
Confidence            99999999873210                       1124899999999999 9999999999998876 577888888


Q ss_pred             HHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc-----CCcc
Q 021831          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFD  239 (307)
Q Consensus       166 l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~d  239 (307)
                      + ....+++|++|||+| +|.+|++++++|+.+|++|+++.++ ++...++++|+++++++...++.+.+.     .++|
T Consensus       152 ~-~~~~l~~g~~vLI~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd  229 (337)
T cd08261         152 V-RRAGVTAGDTVLVVG-AGPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGAD  229 (337)
T ss_pred             H-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCCCC
Confidence            8 588999999999997 5899999999999999999988554 445667889999999988766555443     3699


Q ss_pred             EEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          240 AVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       240 vvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ++||++|+...+..++++|+++|+++.+|..
T Consensus       230 ~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~  260 (337)
T cd08261         230 VVIDATGNPASMEEAVELVAHGGRVVLVGLS  260 (337)
T ss_pred             EEEECCCCHHHHHHHHHHHhcCCEEEEEcCC
Confidence            9999998866889999999999999999854

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=1.1e-29  Score=231.28  Aligned_cols=234  Identities=26%  Similarity=0.319  Sum_probs=190.5

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCcc--------ccCCCCCcccccceEEEE
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRS--------IFEPLLPLILGRDISGEV  100 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~--------~~~~~~p~~~G~e~~G~V  100 (307)
                      ||++++...    .++++ +.+.|++.++||+|++.++++|++|+....|....        .....+|.++|+|++|+|
T Consensus         1 m~a~~~~~~----~~~~~-~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V   75 (341)
T cd08262           1 MRAAVFRDG----PLVVR-DVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEV   75 (341)
T ss_pred             CceEEEeCC----ceEEE-ecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEE
Confidence            688998743    58888 89999999999999999999999999988872110        012235788999999999


Q ss_pred             EEecCCCCC-CCCCCEEEEecCCC-------------CCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHH
Q 021831          101 AAVGASVRS-LTVGQEVFGALHPT-------------AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL  166 (307)
Q Consensus       101 ~~~G~~v~~-~~~Gd~V~~~~~~~-------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l  166 (307)
                      +++|+++++ +++||+|++.+...             ..+|+|++|+.++.+.++++|+++++++++ ++.++++||+++
T Consensus        76 ~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~  154 (341)
T cd08262          76 VDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV  154 (341)
T ss_pred             EEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHH
Confidence            999999987 99999999873211             024899999999999999999999998877 567888999986


Q ss_pred             HHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeC-CccHHHHHHcCCceEEeCCChhH----H---HHhc-C
Q 021831          167 KCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCG-SKSIDRVLAAGAEQAVDYSSKDI----E---LAIK-G  236 (307)
Q Consensus       167 ~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~-Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~----~---~~~~-~  236 (307)
                       ...++++|++|||+| .|.+|++++|+|+.+|++ ++++.. .++...++++|+++++++...+.    .   .... +
T Consensus       155 -~~~~~~~g~~VlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~  232 (341)
T cd08262         155 -RRARLTPGEVALVIG-CGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGP  232 (341)
T ss_pred             -HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCCC
Confidence             588999999999998 599999999999999996 555543 44456678899988998765422    1   1112 4


Q ss_pred             CccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          237 KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       237 ~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ++|++||++|+...+..++++++++|+++.+|..
T Consensus       233 ~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~  266 (341)
T cd08262         233 KPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVC  266 (341)
T ss_pred             CCCEEEECCCCHHHHHHHHHHhccCCEEEEECCC
Confidence            6999999999855788899999999999999865

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=99.97  E-value=1.6e-29  Score=230.37  Aligned_cols=232  Identities=27%  Similarity=0.427  Sum_probs=194.8

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||+|.+++++   .+.++ +.+.|++.+++|+|++.++++|+.|+.+..|...   +...|.++|+|++|+|+++|++++
T Consensus         1 ~~~~~~~~~~---~~~~~-~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~---~~~~~~~~g~~~~G~V~~~G~~v~   73 (343)
T cd08235           1 MKAAVLHGPN---DVRLE-EVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT---DLKPPRILGHEIAGEIVEVGDGVT   73 (343)
T ss_pred             CeEEEEecCC---ceEEE-EccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc---cCCCCcccccceEEEEEeeCCCCC
Confidence            6889998654   57888 8888889999999999999999999998887432   233467899999999999999999


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEEecCCc-----eeeCCCCCChhhhccccchHH
Q 021831          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDE-----LTPKPVSVTHADASAIPFAAL  160 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~-----~~~ip~~~~~~~aa~~~~~~~  160 (307)
                      .+++||+|++..+.                       ...+|.|++|+.++.+.     ++++|+++++.+++.+ .++.
T Consensus        74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~  152 (343)
T cd08235          74 GFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLA  152 (343)
T ss_pred             CCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHH
Confidence            99999999986320                       01358999999999988     9999999999998776 7889


Q ss_pred             HHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc---
Q 021831          161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK---  235 (307)
Q Consensus       161 ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~-Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~---  235 (307)
                      +||+++. ...+++|++|+|+| +|.+|++++++|+..|++ |+++.++ ++.+.+.++|.++++++.+.++.+.+.   
T Consensus       153 ~a~~~l~-~~~~~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~  230 (343)
T cd08235         153 CCINAQR-KAGIKPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELT  230 (343)
T ss_pred             HHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHHHHHHHHh
Confidence            9999996 45899999999997 599999999999999998 8877554 445667788999999888766655433   


Q ss_pred             --CCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          236 --GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       236 --~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                        .++|++||++++...+..++++++++|+++.+|..
T Consensus       231 ~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~  267 (343)
T cd08235         231 DGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGL  267 (343)
T ss_pred             CCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEecc
Confidence              36999999999776888999999999999999864

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=99.97  E-value=2.3e-29  Score=225.92  Aligned_cols=234  Identities=34%  Similarity=0.526  Sum_probs=202.4

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++++.+++.+..+++. +.+.|.+.+++|+|++.++++|++|+....|...  ....+|.++|||++|+|+++|++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~v~~vg~~~~   77 (323)
T cd05276           1 MKAIVIKEPGGPEVLELG-EVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYP--PPPGASDILGLEVAGVVVAVGPGVT   77 (323)
T ss_pred             CeEEEEecCCCcccceEE-ecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCC--CCCCCCCcccceeEEEEEeeCCCCC
Confidence            799999988777788888 7777888999999999999999999998877432  2334678999999999999999999


Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHH
Q 021831          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG  188 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G  188 (307)
                      .+++||+|+++..    +|+|++|+.++.+.++++|+++++.+++.+..++.++|+++.....+.++++|+|+|++|.+|
T Consensus        78 ~~~~Gd~V~~~~~----~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig  153 (323)
T cd05276          78 GWKVGDRVCALLA----GGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVG  153 (323)
T ss_pred             CCCCCCEEEEecC----CCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHH
Confidence            9999999998743    389999999999999999999999999999999999999988778899999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCCc
Q 021831          189 FAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGG  262 (307)
Q Consensus       189 ~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G  262 (307)
                      ++++++++.+|++++.+.++ ++.+.++++|.+.+++....++.+.+.     +++|++||++|+. ....++++++++|
T Consensus       154 ~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~~~~~g  232 (323)
T cd05276         154 TAAIQLAKALGARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGD-YLARNLRALAPDG  232 (323)
T ss_pred             HHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchH-HHHHHHHhhccCC
Confidence            99999999999998888665 345557778888888877655444432     3799999999988 6788899999999


Q ss_pred             EEEEeccC
Q 021831          263 HYMTLHGE  270 (307)
Q Consensus       263 ~~v~~g~~  270 (307)
                      +++.+|..
T Consensus       233 ~~i~~~~~  240 (323)
T cd05276         233 RLVLIGLL  240 (323)
T ss_pred             EEEEEecC
Confidence            99999864

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=99.97  E-value=1.7e-29  Score=230.21  Aligned_cols=230  Identities=27%  Similarity=0.405  Sum_probs=193.5

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      |||++++..+   .+.++ +.+.|++.++||+|++.++++|++|+....|..    ....|.++|+|++|+|+.+|++++
T Consensus         1 ~~a~~~~~~~---~l~~~-~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~----~~~~~~~~g~~~~G~V~~~g~~v~   72 (343)
T cd08236           1 MKALVLTGPG---DLRYE-DIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG----AYHPPLVLGHEFSGTVEEVGSGVD   72 (343)
T ss_pred             CeeEEEecCC---ceeEE-ecCCCCCCCCeEEEEEEEEEECccchHhhcCCC----CCCCCcccCcceEEEEEEECCCCC
Confidence            6899998653   57887 888999999999999999999999999887732    234567899999999999999999


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHH
Q 021831          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (307)
                      .+++||+|++....                       ....|+|++|+.++.+.++++|+++++++++.+ ..++++|++
T Consensus        73 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~  151 (343)
T cd08236          73 DLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHA  151 (343)
T ss_pred             cCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHH
Confidence            99999999986211                       013589999999999999999999999998887 678899999


Q ss_pred             HHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhc-----CCc
Q 021831          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIK-----GKF  238 (307)
Q Consensus       166 l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~-Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~  238 (307)
                      +. ...++++++|+|+| +|.+|++++++|+.+|++ ++++++++ +.+.++++|.++++++.... .+.+.     .++
T Consensus       152 l~-~~~~~~~~~vlI~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~-~~~~~~~~~~~~~  228 (343)
T cd08236         152 VR-LAGITLGDTVVVIG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEED-VEKVRELTEGRGA  228 (343)
T ss_pred             HH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcccc-HHHHHHHhCCCCC
Confidence            86 78899999999997 599999999999999996 88886554 45567888998898877544 33222     369


Q ss_pred             cEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       239 dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      |++|||+|....+..++++|+++|+++.+|..
T Consensus       229 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~  260 (343)
T cd08236         229 DLVIEAAGSPATIEQALALARPGGKVVLVGIP  260 (343)
T ss_pred             CEEEECCCCHHHHHHHHHHhhcCCEEEEEccc
Confidence            99999998766889999999999999999854

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.97  E-value=2.9e-29  Score=224.19  Aligned_cols=240  Identities=41%  Similarity=0.683  Sum_probs=203.4

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++++..++....+.++ +.+.|.++++||+|++.++++|++|+..+.|..........|..+|||++|+|+.+|+++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~   79 (309)
T cd05289           1 MKAVRIHEYGGPEVLELA-DVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVT   79 (309)
T ss_pred             CceEEEcccCCccceeec-ccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCC
Confidence            688999887776677887 7777888999999999999999999998887543222345588899999999999999999


Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHH
Q 021831          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG  188 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G  188 (307)
                      ++++||+|+++... ...|.|++|+.++.+.++++|+++++.+++.+.+.+.++|+++.....+.+|++|+|+|++|.+|
T Consensus        80 ~~~~G~~V~~~~~~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g  158 (309)
T cd05289          80 GFKVGDEVFGMTPF-TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVG  158 (309)
T ss_pred             CCCCCCEEEEccCC-CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHH
Confidence            99999999988611 11289999999999999999999999999999999999999998777799999999999889999


Q ss_pred             HHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhc-CCccEEEECCCChhhHHHHHhcccCCcEEEEe
Q 021831          189 FAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPETERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       189 ~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~  267 (307)
                      ++++++++..|++|+.+.++++...++++|.+++++....++.+... +++|+++|++|+. ....++++++++|+++.+
T Consensus       159 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~  237 (309)
T cd05289         159 SFAVQLAKARGARVIATASAANADFLRSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGGE-TLARSLALVKPGGRLVSI  237 (309)
T ss_pred             HHHHHHHHHcCCEEEEEecchhHHHHHHcCCCEEEeCCCCchhhccCCCCceEEEECCchH-HHHHHHHHHhcCcEEEEE
Confidence            99999999999999888765566667888988888877655443122 4799999999998 889999999999999999


Q ss_pred             ccCc
Q 021831          268 HGET  271 (307)
Q Consensus       268 g~~~  271 (307)
                      |...
T Consensus       238 g~~~  241 (309)
T cd05289         238 AGPP  241 (309)
T ss_pred             cCCC
Confidence            8643

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.97  E-value=4e-29  Score=228.66  Aligned_cols=237  Identities=30%  Similarity=0.514  Sum_probs=193.4

Q ss_pred             eEEEEcccCCCceeEEcCcccCCC-CCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           30 RAVVLPRFGGPEVLEVRPNVEVPD-LKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        30 ka~~~~~~~~~~~~~~~~~~~~p~-~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      |+|++..++.+..++.. +.+.|. +.+++|+|++.++++|++|+....+..  ......|.++|+|++|+|+++|++++
T Consensus         2 ~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~--~~~~~~~~~~g~e~~G~V~~vG~~v~   78 (352)
T cd08247           2 KALTFKNNTSPLTITTI-KLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYT--FHFKVKEKGLGRDYSGVIVKVGSNVA   78 (352)
T ss_pred             ceEEEecCCCcceeecc-CCCCCCCCCCCeEEEEEEEEecChHhHHHhcccc--cccccCCCccCceeEEEEEEeCcccc
Confidence            67899988877666666 555553 489999999999999999998776522  11122477899999999999999998


Q ss_pred             -CCCCCCEEEEecCCC-CCCCcceeEEEecCC----ceeeCCCCCChhhhccccchHHHHHHHHHHHc-CCCCCCEEEEE
Q 021831          109 -SLTVGQEVFGALHPT-AVRGTYADYAVLSED----ELTPKPVSVTHADASAIPFAALTAWRALKCAA-RMSEGQRLLVL  181 (307)
Q Consensus       109 -~~~~Gd~V~~~~~~~-~~~g~~~~~~~~~~~----~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~-~~~~g~~VlI~  181 (307)
                       .|++||+|++..... ...|+|++|+.++.+    .++++|+++++.+++.++..+.+||+++.... .+++|++|+|+
T Consensus        79 ~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~  158 (352)
T cd08247          79 SEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVL  158 (352)
T ss_pred             cCCCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEE
Confidence             899999999875321 124899999999987    78999999999999999999999999998777 79999999999


Q ss_pred             cCCchHHHHHHHHHHHc-CC-EEEEEeCCccHHHHHHcCCceEEeCCChh---H-HH---Hhc--CCccEEEECCCChhh
Q 021831          182 GGGGAVGFAAVQFSVAS-GC-HVSATCGSKSIDRVLAAGAEQAVDYSSKD---I-EL---AIK--GKFDAVLDTIGAPET  250 (307)
Q Consensus       182 Ga~g~~G~~~~~~a~~~-G~-~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~---~-~~---~~~--~~~dvvid~~g~~~~  250 (307)
                      |+++.+|++++++|+.+ +. .++++.+.++.+.++++|++++++....+   + .+   ...  +++|++|||+|+...
T Consensus       159 ga~~~vg~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~  238 (352)
T cd08247         159 GGSTSVGRFAIQLAKNHYNIGTVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDL  238 (352)
T ss_pred             CCCchHHHHHHHHHHhcCCcceEEEEeChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHH
Confidence            99999999999999987 55 67777766666677889999998876544   2 22   222  479999999998557


Q ss_pred             HHHHHhccc---CCcEEEEecc
Q 021831          251 ERLGLNFLK---RGGHYMTLHG  269 (307)
Q Consensus       251 ~~~~~~~l~---~~G~~v~~g~  269 (307)
                      ...++++++   ++|+++.+++
T Consensus       239 ~~~~~~~l~~~~~~G~~v~~~~  260 (352)
T cd08247         239 FPHINSILKPKSKNGHYVTIVG  260 (352)
T ss_pred             HHHHHHHhCccCCCCEEEEEeC
Confidence            888999999   9999998753

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.97  E-value=4.4e-29  Score=223.72  Aligned_cols=231  Identities=34%  Similarity=0.507  Sum_probs=200.0

Q ss_pred             eEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCCC
Q 021831           30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS  109 (307)
Q Consensus        30 ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~  109 (307)
                      |+|.+..++.+..+.+. +.+.+.+.++|++|+|.++++|++|+....|...    ..+|.++|||++|+|+.+|+++++
T Consensus         1 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~----~~~~~~~g~e~~G~v~~~g~~~~~   75 (320)
T cd05286           1 KAVRIHKTGGPEVLEYE-DVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYP----LPLPFVLGVEGAGVVEAVGPGVTG   75 (320)
T ss_pred             CeEEEecCCCccceEEe-ecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCC----CCCCccCCcceeEEEEEECCCCCC
Confidence            56777777777778887 7777778899999999999999999998887432    245778999999999999999999


Q ss_pred             CCCCCEEEEec-CCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHH
Q 021831          110 LTVGQEVFGAL-HPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG  188 (307)
Q Consensus       110 ~~~Gd~V~~~~-~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G  188 (307)
                      +++||+|+++. .     |+|++|+.++.+.++++|++++..+++.+.....++|+.+.....+++|++|+|+|++|.+|
T Consensus        76 ~~~G~~V~~~~~~-----g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g  150 (320)
T cd05286          76 FKVGDRVAYAGPP-----GAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVG  150 (320)
T ss_pred             CCCCCEEEEecCC-----CceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHH
Confidence            99999999875 4     89999999999999999999999999999999999999998788999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCCc
Q 021831          189 FAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGG  262 (307)
Q Consensus       189 ~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G  262 (307)
                      ++++++++.+|++|++++++ ++.+.++++|.+++++....++.+.+.     .++|+++||+++. ....++++++++|
T Consensus       151 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~g  229 (320)
T cd05286         151 LLLTQWAKALGATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKD-TFEGSLDSLRPRG  229 (320)
T ss_pred             HHHHHHHHHcCCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcH-hHHHHHHhhccCc
Confidence            99999999999999888655 445667889998888877655544432     3799999999986 8889999999999


Q ss_pred             EEEEeccCc
Q 021831          263 HYMTLHGET  271 (307)
Q Consensus       263 ~~v~~g~~~  271 (307)
                      +++.+|...
T Consensus       230 ~~v~~g~~~  238 (320)
T cd05286         230 TLVSFGNAS  238 (320)
T ss_pred             EEEEEecCC
Confidence            999998643

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=5.2e-29  Score=224.59  Aligned_cols=236  Identities=34%  Similarity=0.514  Sum_probs=201.5

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++++..+++...++++ +.+.|.+.+++|+|++.++++|++|+....+....   ...|.++|||++|+|+.+|++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~---~~~~~~~g~e~~G~v~~~G~~~~   76 (325)
T cd08271           1 MKAWVLPKPGAALQLTLE-EIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPA---WSYPHVPGVDGAGVVVAVGAKVT   76 (325)
T ss_pred             CeeEEEccCCCcceeEEe-ccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC---CCCCcccccceEEEEEEeCCCCC
Confidence            799999977754579999 89999999999999999999999999887764211   12367899999999999999999


Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHH
Q 021831          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG  188 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G  188 (307)
                      ++++||+|++..... .+|+|++|+.++.+.++++|+++++.+++.+.+.+.++++++.....+++|++|+|+|+++.+|
T Consensus        77 ~~~~Gd~V~~~~~~~-~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig  155 (325)
T cd08271          77 GWKVGDRVAYHASLA-RGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVG  155 (325)
T ss_pred             cCCCCCEEEeccCCC-CCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHH
Confidence            999999999875211 2389999999999999999999999999999999999999998788999999999999989999


Q ss_pred             HHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCCcE
Q 021831          189 FAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGH  263 (307)
Q Consensus       189 ~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G~  263 (307)
                      ++++++++..|++++.+.+.++.+.+.++|.+.+++....++.+.+.     .++|+++|++++. ....++++++++|+
T Consensus       156 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~G~  234 (325)
T cd08271         156 SFAVQLAKRAGLRVITTCSKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGE-TAAALAPTLAFNGH  234 (325)
T ss_pred             HHHHHHHHHcCCEEEEEEcHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcH-hHHHHHHhhccCCE
Confidence            99999999999998887755556667888998888877655444333     3699999999987 56778999999999


Q ss_pred             EEEeccC
Q 021831          264 YMTLHGE  270 (307)
Q Consensus       264 ~v~~g~~  270 (307)
                      ++.+|..
T Consensus       235 ~v~~~~~  241 (325)
T cd08271         235 LVCIQGR  241 (325)
T ss_pred             EEEEcCC
Confidence            9998754

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=99.97  E-value=3.5e-29  Score=225.01  Aligned_cols=238  Identities=36%  Similarity=0.535  Sum_probs=203.9

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++++...+.+..+.+. +.+.|.+.+++|+|++.++++|++|+....|....  ....|.++|||++|+|+++|++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~   77 (325)
T cd08253           1 MRAIRYHEFGAPDVLRLG-DLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPG--LPPLPYVPGSDGAGVVEAVGEGVD   77 (325)
T ss_pred             CceEEEcccCCcccceee-ecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCC--CCCCCeecccceEEEEEeeCCCCC
Confidence            688888877766778888 89999999999999999999999999988774322  235688999999999999999999


Q ss_pred             CCCCCCEEEEecCCC-CCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchH
Q 021831          109 SLTVGQEVFGALHPT-AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV  187 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~  187 (307)
                      +|++||+|++..... ...|++++|+.++.+.++++|+++++.+++.+..++.++|+.+.....+++|++++|+|+++.+
T Consensus        78 ~~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~  157 (325)
T cd08253          78 GLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAV  157 (325)
T ss_pred             CCCCCCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchH
Confidence            999999999876211 1248999999999999999999999999999999999999999877899999999999999999


Q ss_pred             HHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCC
Q 021831          188 GFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRG  261 (307)
Q Consensus       188 G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~  261 (307)
                      |++++++++.+|++|+++.+.+ +.+.+.++|.+++++....++.+.+.     +++|+++|+.|+. .....+++++++
T Consensus       158 g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~  236 (325)
T cd08253         158 GHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANV-NLAKDLDVLAPG  236 (325)
T ss_pred             HHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchH-HHHHHHHhhCCC
Confidence            9999999999999999887654 45557778988888877655544332     3799999999987 678888999999


Q ss_pred             cEEEEeccC
Q 021831          262 GHYMTLHGE  270 (307)
Q Consensus       262 G~~v~~g~~  270 (307)
                      |+++.+|..
T Consensus       237 g~~v~~~~~  245 (325)
T cd08253         237 GRIVVYGSG  245 (325)
T ss_pred             CEEEEEeec
Confidence            999999864

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=99.97  E-value=4.1e-29  Score=226.20  Aligned_cols=232  Identities=26%  Similarity=0.331  Sum_probs=191.9

Q ss_pred             eeEEEEcccC----CCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEec
Q 021831           29 CRAVVLPRFG----GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG  104 (307)
Q Consensus        29 ~ka~~~~~~~----~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G  104 (307)
                      .|+|++...+    .++.++++ +.+.|.+.+++|+||+.++++|+.|.....+......+...+.++|+|++|+|+++|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G   80 (329)
T cd05288           2 NRQVVLAKRPEGPPPPDDFELV-EVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESR   80 (329)
T ss_pred             CcEEEEeccCCCCCCccceeEE-eccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecC
Confidence            5788887665    56789999 899999999999999999999998877666532111122235678999999999999


Q ss_pred             CCCCCCCCCCEEEEecCCCCCCCcceeEEEecC-CceeeCCCCCC--hhhhcc-ccchHHHHHHHHHHHcCCCCCCEEEE
Q 021831          105 ASVRSLTVGQEVFGALHPTAVRGTYADYAVLSE-DELTPKPVSVT--HADASA-IPFAALTAWRALKCAARMSEGQRLLV  180 (307)
Q Consensus       105 ~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~-~~~~~ip~~~~--~~~aa~-~~~~~~ta~~~l~~~~~~~~g~~VlI  180 (307)
                      ++  ++++||+|++.       ++|++|+.++. +.++++|++++  +.+++. +++++.++|+++.....+.+|++|||
T Consensus        81 ~~--~~~~Gd~V~~~-------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI  151 (329)
T cd05288          81 SP--DFKVGDLVSGF-------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVV  151 (329)
T ss_pred             CC--CCCCCCEEecc-------cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEE
Confidence            64  79999999875       68999999999 99999999985  445555 88899999999987788899999999


Q ss_pred             EcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHH-cCCceEEeCCChhHHHHhc----CCccEEEECCCChhhHHHH
Q 021831          181 LGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLA-AGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLG  254 (307)
Q Consensus       181 ~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~-~g~~~v~~~~~~~~~~~~~----~~~dvvid~~g~~~~~~~~  254 (307)
                      +|++|.+|++++++++.+|++|++++++. +.+.+++ +|+++++++.+.++.+.+.    +++|++||++|+. .+..+
T Consensus       152 ~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~d~vi~~~g~~-~~~~~  230 (329)
T cd05288         152 SAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVGGE-ILDAA  230 (329)
T ss_pred             ecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhccCCceEEEEcchHH-HHHHH
Confidence            99999999999999999999998886654 4566666 8999999887765544433    4799999999986 88999


Q ss_pred             HhcccCCcEEEEeccCc
Q 021831          255 LNFLKRGGHYMTLHGET  271 (307)
Q Consensus       255 ~~~l~~~G~~v~~g~~~  271 (307)
                      +++++++|+++.+|...
T Consensus       231 ~~~l~~~G~~v~~g~~~  247 (329)
T cd05288         231 LTLLNKGGRIALCGAIS  247 (329)
T ss_pred             HHhcCCCceEEEEeecc
Confidence            99999999999998553

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=99.97  E-value=3.4e-29  Score=228.39  Aligned_cols=232  Identities=25%  Similarity=0.303  Sum_probs=187.2

Q ss_pred             EEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCCCCC
Q 021831           32 VVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLT  111 (307)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~  111 (307)
                      +.+++.   ..++++ +.+.|.+.++||+|+|.++++|+.|++.+.+..........|.++|+|++|+|+++|+++++++
T Consensus         2 ~~~~~~---~~~~~~-~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~   77 (343)
T cd05285           2 AVLHGP---GDLRLE-ERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLK   77 (343)
T ss_pred             ceEecC---CceeEE-ECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCC
Confidence            445533   468888 8899999999999999999999999987643211111123577899999999999999999999


Q ss_pred             CCCEEEEecC------------------------CCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHH
Q 021831          112 VGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK  167 (307)
Q Consensus       112 ~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~  167 (307)
                      +||+|++.+.                        .....|+|++|+.++.+.++++|+++++.+++.+ .++.+||+++ 
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-  155 (343)
T cd05285          78 VGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-  155 (343)
T ss_pred             CCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-
Confidence            9999986210                        0012589999999999999999999999998776 5788999987 


Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCC-ccHHHHHHcCCceEEeCCChhH---HHHhc-----CC
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGS-KSIDRVLAAGAEQAVDYSSKDI---ELAIK-----GK  237 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~-Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~---~~~~~-----~~  237 (307)
                      ....+++|++|||.| .|.+|++++++|+.+|++ |+.+.++ ++...++++|++++++++..++   .+.+.     ++
T Consensus       156 ~~~~~~~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~  234 (343)
T cd05285         156 RRAGVRPGDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKG  234 (343)
T ss_pred             HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCC
Confidence            688999999999987 589999999999999997 7777554 4556678899999998876553   33222     36


Q ss_pred             ccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       238 ~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      +|++|||+|+...+..++++++++|+++.+|..
T Consensus       235 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~  267 (343)
T cd05285         235 PDVVIECTGAESCIQTAIYATRPGGTVVLVGMG  267 (343)
T ss_pred             CCEEEECCCCHHHHHHHHHHhhcCCEEEEEccC
Confidence            999999999865788899999999999999854

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=99.97  E-value=4.5e-29  Score=226.48  Aligned_cols=232  Identities=27%  Similarity=0.404  Sum_probs=193.0

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++++.+++   .+++. +.+.|++.++||+||+.++++|+.|+....|...    ..+|.++|+|++|+|+.+|++++
T Consensus         1 ~~a~~~~~~~---~~~~~-~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~----~~~p~~~g~~~~G~v~~vG~~v~   72 (334)
T cd08234           1 MKALVYEGPG---ELEVE-EVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFG----AAPPLVPGHEFAGVVVAVGSKVT   72 (334)
T ss_pred             CeeEEecCCC---ceEEE-eccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCC----CCCCcccccceEEEEEEeCCCCC
Confidence            6899998655   58888 8899999999999999999999999998888432    23678999999999999999999


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHH
Q 021831          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (307)
                      ++++||+|++....                       ...+|+|++|+.++.+.++++|+++++.+++.. ..+.+++++
T Consensus        73 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~  151 (334)
T cd08234          73 GFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHG  151 (334)
T ss_pred             CCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHH
Confidence            99999999872210                       013589999999999999999999999988766 678899998


Q ss_pred             HHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCC-ccHHHHHHcCCceEEeCCChhHHHH--hc-CCccE
Q 021831          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGS-KSIDRVLAAGAEQAVDYSSKDIELA--IK-GKFDA  240 (307)
Q Consensus       166 l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~-Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~--~~-~~~dv  240 (307)
                      + ...++++|++|||+| .|.+|++++++|+.+|++ |+++.++ ++.+.++++|.++++++...++...  .. +++|+
T Consensus       152 l-~~~~~~~g~~vlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~vd~  229 (334)
T cd08234         152 L-DLLGIKPGDSVLVFG-AGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNPYGFDV  229 (334)
T ss_pred             H-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHHHHhcCCCCcE
Confidence            8 688999999999997 599999999999999996 7777554 4456678889888888766543322  12 47999


Q ss_pred             EEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          241 VLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       241 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +||++|.......++++|+++|+++.+|...
T Consensus       230 v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~  260 (334)
T cd08234         230 VIEATGVPKTLEQAIEYARRGGTVLVFGVYA  260 (334)
T ss_pred             EEECCCChHHHHHHHHHHhcCCEEEEEecCC
Confidence            9999987668889999999999999998643

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=99.97  E-value=7.2e-29  Score=229.01  Aligned_cols=231  Identities=26%  Similarity=0.323  Sum_probs=189.5

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCC-CCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v  107 (307)
                      ||+|++..+   ..++++ +.++|.+ .++||+|++.++++|++|++...|...    ...|.++|||++|+|+++|+++
T Consensus         1 m~~~~~~~~---~~~~~~-~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~----~~~p~~~g~e~~G~V~~vG~~v   72 (375)
T cd08282           1 MKAVVYGGP---GNVAVE-DVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG----AEPGLVLGHEAMGEVEEVGSAV   72 (375)
T ss_pred             CceEEEecC---CceeEE-eCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC----CCCCceeccccEEEEEEeCCCC
Confidence            578888744   468888 8999985 799999999999999999999888432    3458899999999999999999


Q ss_pred             CCCCCCCEEEEecCC---------------------------------CCCCCcceeEEEecCC--ceeeCCCCCChh--
Q 021831          108 RSLTVGQEVFGALHP---------------------------------TAVRGTYADYAVLSED--ELTPKPVSVTHA--  150 (307)
Q Consensus       108 ~~~~~Gd~V~~~~~~---------------------------------~~~~g~~~~~~~~~~~--~~~~ip~~~~~~--  150 (307)
                      +.+++||+|++....                                 ...+|+|++|+.++.+  .++++|+++++.  
T Consensus        73 ~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~  152 (375)
T cd08282          73 ESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEK  152 (375)
T ss_pred             CcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhh
Confidence            999999999873210                                 0124889999999975  899999999998  


Q ss_pred             -hhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCCceEEeCCC
Q 021831          151 -DASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGAEQAVDYSS  227 (307)
Q Consensus       151 -~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~~~  227 (307)
                       +++.+..+++++|+++ ....+++|++|+|.| .|.+|++++++++.+|+ +|+++.+. ++.+.++++|+. .+++.+
T Consensus       153 ~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~~  229 (375)
T cd08282         153 DDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFG-AGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-PIDFSD  229 (375)
T ss_pred             hheeeecchHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-EeccCc
Confidence             5677888899999998 588999999999987 59999999999999998 78887544 445667889984 566665


Q ss_pred             hhHHHHhc----CCccEEEECCCChh-----------hHHHHHhcccCCcEEEEeccC
Q 021831          228 KDIELAIK----GKFDAVLDTIGAPE-----------TERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       228 ~~~~~~~~----~~~dvvid~~g~~~-----------~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      .++.+.+.    +++|++|||+|+..           .+..++++++++|+++.+|..
T Consensus       230 ~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~  287 (375)
T cd08282         230 GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVY  287 (375)
T ss_pred             ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEecc
Confidence            55544333    36999999999762           488999999999999988864

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=8.4e-29  Score=224.47  Aligned_cols=239  Identities=38%  Similarity=0.579  Sum_probs=201.4

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++++...+.+..+++. +.+.|.+.+++|+|++.++++|++|+..+.|...  ....+|.++|||++|+|+.+|++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~g~e~~G~v~~~G~~~~   77 (342)
T cd08266           1 MKAVVIRGHGGPEVLEYG-DLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPG--IKLPLPHILGSDGAGVVEAVGPGVT   77 (342)
T ss_pred             CeEEEEecCCCccceeEe-ecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCC--CCCCCCeecccceEEEEEEeCCCCC
Confidence            689999877777788888 7788888999999999999999999998888432  1234578899999999999999999


Q ss_pred             CCCCCCEEEEecCCC-----------------------CCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHH
Q 021831          109 SLTVGQEVFGALHPT-----------------------AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~~-----------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (307)
                      .+++||+|++.....                       ...|+|++|+.++.+.++++|+++++.+++.++.++.++|++
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~  157 (342)
T cd08266          78 NVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHM  157 (342)
T ss_pred             CCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHH
Confidence            999999998863211                       135889999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhc-----CCcc
Q 021831          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIK-----GKFD  239 (307)
Q Consensus       166 l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~d  239 (307)
                      +.....++++++++|+|+++.+|++++++++.+|++++.+.+++ +.+.+...+.+.+++....++.+.+.     +++|
T Consensus       158 l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  237 (342)
T cd08266         158 LVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGVD  237 (342)
T ss_pred             HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCCCc
Confidence            87788899999999999989999999999999999988886654 44556777877777766554443332     3799


Q ss_pred             EEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          240 AVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       240 vvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +++|+.|.. .+..++++++++|+++.+|...
T Consensus       238 ~~i~~~g~~-~~~~~~~~l~~~G~~v~~~~~~  268 (342)
T cd08266         238 VVVEHVGAA-TWEKSLKSLARGGRLVTCGATT  268 (342)
T ss_pred             EEEECCcHH-HHHHHHHHhhcCCEEEEEecCC
Confidence            999999987 7889999999999999998654

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=99.97  E-value=9.7e-29  Score=223.29  Aligned_cols=236  Identities=25%  Similarity=0.318  Sum_probs=193.6

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++++..+|+++.++++ +.+.|.|+++||+|++.++++|++|.....|...  ....+|.++|||++|+|++  ++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~g~e~~G~V~~--~~~~   75 (324)
T cd08288           1 FKALVLEKDDGGTSAELR-ELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGG--IVRTFPLVPGIDLAGTVVE--SSSP   75 (324)
T ss_pred             CeeEEEeccCCCcceEEE-ECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCcc--ccCCCCCccccceEEEEEe--CCCC
Confidence            789999988877789999 8999999999999999999999999998877431  1123577899999999998  7778


Q ss_pred             CCCCCCEEEEecCC--CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHH--HcCCC-CCCEEEEEcC
Q 021831          109 SLTVGQEVFGALHP--TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKC--AARMS-EGQRLLVLGG  183 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~--~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~-~g~~VlI~Ga  183 (307)
                      ++++||+|+++...  ...+|+|++|+.++.+.++++|+++++++++.++..++++++++..  ..... +|++|+|+|+
T Consensus        76 ~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga  155 (324)
T cd08288          76 RFKPGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGA  155 (324)
T ss_pred             CCCCCCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECC
Confidence            89999999886311  0124899999999999999999999999999999999999877641  23444 6789999999


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEeC-CccHHHHHHcCCceEEeCCChhHH-HHhc-CCccEEEECCCChhhHHHHHhcccC
Q 021831          184 GGAVGFAAVQFSVASGCHVSATCG-SKSIDRVLAAGAEQAVDYSSKDIE-LAIK-GKFDAVLDTIGAPETERLGLNFLKR  260 (307)
Q Consensus       184 ~g~~G~~~~~~a~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~-~~~~-~~~dvvid~~g~~~~~~~~~~~l~~  260 (307)
                      +|.+|++++++|+.+|++|+++++ .++.+.++++|+++++++.+.... ..+. +++|.+||++++. ....++..++.
T Consensus       156 ~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~  234 (324)
T cd08288         156 AGGVGSVAVALLARLGYEVVASTGRPEEADYLRSLGASEIIDRAELSEPGRPLQKERWAGAVDTVGGH-TLANVLAQTRY  234 (324)
T ss_pred             CcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhHhhhhhccCcccEEEECCcHH-HHHHHHHHhcC
Confidence            999999999999999999888855 455666888999999987653321 1122 4689999999985 67788889999


Q ss_pred             CcEEEEeccC
Q 021831          261 GGHYMTLHGE  270 (307)
Q Consensus       261 ~G~~v~~g~~  270 (307)
                      +|+++.+|..
T Consensus       235 ~g~~~~~G~~  244 (324)
T cd08288         235 GGAVAACGLA  244 (324)
T ss_pred             CCEEEEEEec
Confidence            9999999864

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=99.97  E-value=1.3e-28  Score=223.14  Aligned_cols=230  Identities=30%  Similarity=0.357  Sum_probs=194.2

Q ss_pred             eeEEEEcccCCC--ceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCC
Q 021831           29 CRAVVLPRFGGP--EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (307)
Q Consensus        29 ~ka~~~~~~~~~--~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~  106 (307)
                      ||++++.+.+.+  +.+++. +.+.|.+.++||+||+.++++|++|+....|..+   ....|.++|||++|+|+++|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~---~~~~~~~~g~e~~G~V~~vG~~   76 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLT-EVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLP---PPKLPLIPGHEIVGRVEAVGPG   76 (329)
T ss_pred             CeEEEEecCCCCCCCCceEE-eccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCC---CCCCCccccccccEEEEEECCC
Confidence            688999877642  457777 7777889999999999999999999998888432   2345789999999999999999


Q ss_pred             CCCCCCCCEEEEecC------------------------CCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHH
Q 021831          107 VRSLTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTA  162 (307)
Q Consensus       107 v~~~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta  162 (307)
                      ++++++||+|+....                        ....+|+|++|+.++.+.++++|+++++.+++.+.+++.+|
T Consensus        77 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta  156 (329)
T cd08298          77 VTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIG  156 (329)
T ss_pred             CCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHH
Confidence            999999999976311                        01125899999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhcCCccEE
Q 021831          163 WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAV  241 (307)
Q Consensus       163 ~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvv  241 (307)
                      |+++ ..++++++++|+|+| .|.+|++++++++..|++|+++++++ +.+.++++|++++++....     ..+++|++
T Consensus       157 ~~~~-~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~~vD~v  229 (329)
T cd08298         157 YRAL-KLAGLKPGQRLGLYG-FGASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGDSDDL-----PPEPLDAA  229 (329)
T ss_pred             HHHH-HhhCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHHhCCcEEeccCcc-----CCCcccEE
Confidence            9999 689999999999997 69999999999999999999886654 4566788999888776542     12469999


Q ss_pred             EECCCChhhHHHHHhcccCCcEEEEecc
Q 021831          242 LDTIGAPETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       242 id~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      +++.+....+..++++++++|+++.+|.
T Consensus       230 i~~~~~~~~~~~~~~~l~~~G~~v~~g~  257 (329)
T cd08298         230 IIFAPVGALVPAALRAVKKGGRVVLAGI  257 (329)
T ss_pred             EEcCCcHHHHHHHHHHhhcCCEEEEEcC
Confidence            9997766688999999999999999885

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=1.1e-28  Score=222.73  Aligned_cols=222  Identities=24%  Similarity=0.337  Sum_probs=183.7

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++++..+   ..++++ +.+.|+++++||+|++.++++|++|+....|..      ..|.++|||++|+|+++|++  
T Consensus         1 ~~a~~~~~~---~~~~~~-~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~------~~~~~~G~e~~G~Vv~~G~~--   68 (319)
T cd08242           1 MKALVLDGG---LDLRVE-DLPKPEPPPGEALVRVLLAGICNTDLEIYKGYY------PFPGVPGHEFVGIVEEGPEA--   68 (319)
T ss_pred             CeeEEEeCC---CcEEEE-ECCCCCCCCCeEEEEEEEEEEccccHHHHcCCC------CCCCccCceEEEEEEEeCCC--
Confidence            689999853   368999 999999999999999999999999999988843      25778999999999999998  


Q ss_pred             CCCCCCEEEEecCC------------------------CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHH
Q 021831          109 SLTVGQEVFGALHP------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (307)
                       +++||+|......                        ...+|+|++|+.++.+.++++|++++.++++.+ .+..++|.
T Consensus        69 -~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~  146 (319)
T cd08242          69 -ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALE  146 (319)
T ss_pred             -CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHH
Confidence             6799999743211                        012589999999999999999999998888764 45556676


Q ss_pred             HHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEE
Q 021831          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLD  243 (307)
Q Consensus       165 ~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid  243 (307)
                      ++ ...++++|++|||+| +|.+|++++|+|+.+|++|+++++ .++.+.++++|++.++++...    .-.+++|++||
T Consensus       147 ~~-~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~d~vid  220 (319)
T cd08242         147 IL-EQVPITPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPDEAE----SEGGGFDVVVE  220 (319)
T ss_pred             HH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEeCcccc----ccCCCCCEEEE
Confidence            66 478899999999997 699999999999999999888865 455677888999888776532    11147999999


Q ss_pred             CCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          244 TIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       244 ~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ++|+...+..++++++++|+++..+..
T Consensus       221 ~~g~~~~~~~~~~~l~~~g~~v~~~~~  247 (319)
T cd08242         221 ATGSPSGLELALRLVRPRGTVVLKSTY  247 (319)
T ss_pred             CCCChHHHHHHHHHhhcCCEEEEEccc
Confidence            999866889999999999999987653

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=99.97  E-value=1.7e-28  Score=223.78  Aligned_cols=233  Identities=23%  Similarity=0.285  Sum_probs=189.1

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCC-CCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v  107 (307)
                      ||++.++.+   +++++. +.++|.| +++||+||+.++++|++|+....|...    ...|.++|||++|+|+++|+++
T Consensus         1 m~~~~~~~~---~~~~~~-~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v   72 (345)
T cd08287           1 MRATVIHGP---GDIRVE-EVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP----TRAPAPIGHEFVGVVEEVGSEV   72 (345)
T ss_pred             CceeEEecC---CceeEE-eCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC----CCCCcccccceEEEEEEeCCCC
Confidence            688999843   458888 8899986 899999999999999999998887432    2347899999999999999999


Q ss_pred             CCCCCCCEEEEecCC-----------------------CCCCCcceeEEEecCC--ceeeCCCCCChhhhc-----cccc
Q 021831          108 RSLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSED--ELTPKPVSVTHADAS-----AIPF  157 (307)
Q Consensus       108 ~~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa-----~~~~  157 (307)
                      ..+++||+|++....                       ...+|+|++|+.++.+  .++++|+++++..+.     .+..
T Consensus        73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~  152 (345)
T cd08287          73 TSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSD  152 (345)
T ss_pred             CccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhc
Confidence            999999999872110                       0134899999999974  899999999872221     1225


Q ss_pred             hHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhc
Q 021831          158 AALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIK  235 (307)
Q Consensus       158 ~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~-Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~  235 (307)
                      .+.+||+++. ...+++|++|+|.| +|.+|++++++|+.+|++ ++++.+.+ +.+.++++|+++++++...++.+.+.
T Consensus       153 ~~~~a~~~~~-~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~i~  230 (345)
T cd08287         153 VMGTGHHAAV-SAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVR  230 (345)
T ss_pred             HHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHHHHH
Confidence            6788999885 78899999999977 699999999999999995 66665544 45567889999999988766555443


Q ss_pred             -----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          236 -----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       236 -----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                           .++|+++|++|+...+..++++++++|+++.+|.+.
T Consensus       231 ~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~  271 (345)
T cd08287         231 ELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPH  271 (345)
T ss_pred             HhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccC
Confidence                 369999999998768899999999999999998654

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05281 TDH Threonine dehydrogenase

Probab=99.97  E-value=1.7e-28  Score=223.57  Aligned_cols=234  Identities=27%  Similarity=0.368  Sum_probs=187.8

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++.++..++  .+++. +.+.|.|.++|++||+.++++|++|+.++.+..........|.++|+|++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~--~~~~~-~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~   77 (341)
T cd05281           1 MKAIVKTKAGP--GAELV-EVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVT   77 (341)
T ss_pred             CcceEEecCCC--ceEEE-eCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCC
Confidence            68899997654  58888 8888999999999999999999999987654210011223567899999999999999999


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHH
Q 021831          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (307)
                      .+++||+|+++...                       ....|+|++|+.++.+.++++|++++++. +++..++.++++.
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~-a~~~~~~~~a~~~  156 (341)
T cd05281          78 RVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEI-ASIQEPLGNAVHT  156 (341)
T ss_pred             CCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHH-hhhhhHHHHHHHH
Confidence            99999999885210                       01248999999999999999999999854 4666778888887


Q ss_pred             HHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc-----CCc
Q 021831          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK-----GKF  238 (307)
Q Consensus       166 l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~  238 (307)
                      +.  ...++|++|||.| .|.+|++++++++.+|+ +|+++.++ ++.+.++++|.++++++...++. .+.     +++
T Consensus       157 ~~--~~~~~g~~vlV~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~v  232 (341)
T cd05281         157 VL--AGDVSGKSVLITG-CGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREEDVV-EVKSVTDGTGV  232 (341)
T ss_pred             HH--hcCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcccccHH-HHHHHcCCCCC
Confidence            64  4557899999987 59999999999999999 78888444 34556788999988887665554 322     479


Q ss_pred             cEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       239 dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      |++||++|+......++++|+++|+++.+|..
T Consensus       233 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~  264 (341)
T cd05281         233 DVVLEMSGNPKAIEQGLKALTPGGRVSILGLP  264 (341)
T ss_pred             CEEEECCCCHHHHHHHHHHhccCCEEEEEccC
Confidence            99999999876889999999999999999854

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=1.8e-28  Score=220.44  Aligned_cols=237  Identities=39%  Similarity=0.647  Sum_probs=193.2

Q ss_pred             EEcccCCCcee--EEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCCCC
Q 021831           33 VLPRFGGPEVL--EVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSL  110 (307)
Q Consensus        33 ~~~~~~~~~~~--~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~  110 (307)
                      +++.+++++++  ++. +.+.|+|.++||+|++.++++|++|+....|..........|..+|||++|+|+++|++++++
T Consensus         2 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~   80 (319)
T cd08267           2 VYTRYGSPEVLLLLEV-EVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRF   80 (319)
T ss_pred             eeCCCCChhhhhhccc-cCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCC
Confidence            34556666665  777 888899999999999999999999999887743221123456789999999999999999999


Q ss_pred             CCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHH
Q 021831          111 TVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFA  190 (307)
Q Consensus       111 ~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~  190 (307)
                      ++||+|++.... ...|+|++|+.++.+.++++|+++++.+++.+..++.+||+++.....+++|++|+|+|++|.+|++
T Consensus        81 ~~Gd~V~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~  159 (319)
T cd08267          81 KVGDEVFGRLPP-KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTF  159 (319)
T ss_pred             CCCCEEEEeccC-CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHH
Confidence            999999987521 1238999999999999999999999999999999999999999877779999999999999999999


Q ss_pred             HHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHh-c-CCccEEEECCCCh-hhHHHHHhcccCCcEEEEe
Q 021831          191 AVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAI-K-GKFDAVLDTIGAP-ETERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       191 ~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-~-~~~dvvid~~g~~-~~~~~~~~~l~~~G~~v~~  267 (307)
                      ++++++.+|++|++++++++.+.++++|.+++++....++.... . +++|+++||+|+. ......+..++++|+++.+
T Consensus       160 ~~~la~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~  239 (319)
T cd08267         160 AVQIAKALGAHVTGVCSTRNAELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSV  239 (319)
T ss_pred             HHHHHHHcCCEEEEEeCHHHHHHHHHcCCCEeecCCCCCcchhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEe
Confidence            99999999999998876666666888998888877654443111 1 4799999999953 2333444459999999999


Q ss_pred             ccCc
Q 021831          268 HGET  271 (307)
Q Consensus       268 g~~~  271 (307)
                      |...
T Consensus       240 g~~~  243 (319)
T cd08267         240 GGGP  243 (319)
T ss_pred             cccc
Confidence            8653

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=99.97  E-value=2.3e-28  Score=222.38  Aligned_cols=228  Identities=27%  Similarity=0.375  Sum_probs=184.7

Q ss_pred             CCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHh-CCCccccCCCCCcccccceEEEEEEecCCCCCCCCCCEEE
Q 021831           39 GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRS-GYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVF  117 (307)
Q Consensus        39 ~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~-g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~  117 (307)
                      +.+.++++ +.++|.++++||+|++.++++|++|+.... |.... .....|.++|+|++|+|+++|+++++|++||+|+
T Consensus         5 ~~~~~~~~-~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~-~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~   82 (339)
T cd08232           5 AAGDLRVE-ERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGT-VRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVA   82 (339)
T ss_pred             cCCceEEE-EcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCc-ccccCCeecCccceEEEEeeCCCCCcCCCCCEEE
Confidence            34578999 889999999999999999999999998764 32111 1234577899999999999999999999999998


Q ss_pred             EecCC----------------------------CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHH
Q 021831          118 GALHP----------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCA  169 (307)
Q Consensus       118 ~~~~~----------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~  169 (307)
                      +....                            ...+|+|++|+.++.+.++++|+++++++++. ..+++++|+++...
T Consensus        83 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~  161 (339)
T cd08232          83 VNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRA  161 (339)
T ss_pred             EccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhc
Confidence            73110                            01358999999999999999999999988875 57888999998755


Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhc--CCccEEEECC
Q 021831          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIK--GKFDAVLDTI  245 (307)
Q Consensus       170 ~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~--~~~dvvid~~  245 (307)
                      ..+ +|++|||.| .|.+|++++++|+.+|+ +++++.+++ +.+.++++|.++++++...++.....  +++|++||+.
T Consensus       162 ~~~-~~~~VLI~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~vd~vld~~  239 (339)
T cd08232         162 GDL-AGKRVLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYAADKGDFDVVFEAS  239 (339)
T ss_pred             CCC-CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhhhhhhccCCCccEEEECC
Confidence            556 899999987 58999999999999999 788886554 34567888999999877654333222  3699999999


Q ss_pred             CChhhHHHHHhcccCCcEEEEeccCc
Q 021831          246 GAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       246 g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      |+...+..++++|+++|+++.+|...
T Consensus       240 g~~~~~~~~~~~L~~~G~~v~~g~~~  265 (339)
T cd08232         240 GAPAALASALRVVRPGGTVVQVGMLG  265 (339)
T ss_pred             CCHHHHHHHHHHHhcCCEEEEEecCC
Confidence            97657899999999999999998543

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=2.5e-28  Score=226.10  Aligned_cols=237  Identities=22%  Similarity=0.262  Sum_probs=186.8

Q ss_pred             cceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCcc----ccCCCCCcccccceEEEEEE
Q 021831           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRS----IFEPLLPLILGRDISGEVAA  102 (307)
Q Consensus        27 ~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~----~~~~~~p~~~G~e~~G~V~~  102 (307)
                      +.+...++..  .  .++++ +.+.|+++++||+|++.++++|++|++...+....    .....+|.++|||++|+|++
T Consensus        27 ~~~~~~~~~~--~--~~~~~-~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~  101 (384)
T cd08265          27 TNLGSKVWRY--P--ELRVE-DVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEK  101 (384)
T ss_pred             ccceeEEEeC--C--CEEEE-ECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEE
Confidence            3444555552  1  48888 99999999999999999999999999987642110    01134678999999999999


Q ss_pred             ecCCCCCCCCCCEEEEecCC-----------------------CCCCCcceeEEEecCCceeeCCCCC-------Chhhh
Q 021831          103 VGASVRSLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSV-------THADA  152 (307)
Q Consensus       103 ~G~~v~~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~-------~~~~a  152 (307)
                      +|++++.|++||+|++.+..                       ...+|+|++|+.++.+.++++|+++       +.. +
T Consensus       102 vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~  180 (384)
T cd08265         102 TGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-A  180 (384)
T ss_pred             ECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-H
Confidence            99999999999999862110                       1125899999999999999999863       444 5


Q ss_pred             ccccchHHHHHHHHHHH-cCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCc-cHHHHHHcCCceEEeCCCh-
Q 021831          153 SAIPFAALTAWRALKCA-ARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSK-SIDRVLAAGAEQAVDYSSK-  228 (307)
Q Consensus       153 a~~~~~~~ta~~~l~~~-~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~-  228 (307)
                      +.+..++.+||+++... .++++|++|||+| .|.+|++++++|+.+|+ +|+++.+.+ +.+.++++|+++++++.+. 
T Consensus       181 a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~  259 (384)
T cd08265         181 GALVEPTSVAYNGLFIRGGGFRPGAYVVVYG-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMR  259 (384)
T ss_pred             hhhhhHHHHHHHHHHhhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccc
Confidence            66667889999998655 6899999999996 59999999999999999 788886544 4556788999998887633 


Q ss_pred             --hHHHHhc-----CCccEEEECCCCh-hhHHHHHhcccCCcEEEEeccC
Q 021831          229 --DIELAIK-----GKFDAVLDTIGAP-ETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       229 --~~~~~~~-----~~~dvvid~~g~~-~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                        ++.+.+.     .++|+|+|++|+. ..+..++++|+++|+++.+|..
T Consensus       260 ~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~  309 (384)
T cd08265         260 DCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRA  309 (384)
T ss_pred             cccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCC
Confidence              4444332     3799999999973 3678899999999999999854

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=4.1e-28  Score=218.56  Aligned_cols=238  Identities=32%  Similarity=0.466  Sum_probs=202.2

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++.+++.+.++.++++ +.+.|.+.+++++|++.++++|+.|.....|.....  ..+|.++|||++|+|+.+|++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~~G~~~~   77 (328)
T cd08268           1 MRAVRFHQFGGPEVLRIE-ELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP--PPLPARLGYEAAGVVEAVGAGVT   77 (328)
T ss_pred             CeEEEEeccCCcceeEEe-ecCCCCCCCCeEEEEEEEEecChHHhheeccccCCC--CCCCCCCCcceEEEEEeeCCCCC
Confidence            688999987777788888 888888999999999999999999998877743222  24477899999999999999999


Q ss_pred             CCCCCCEEEEecC-CCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchH
Q 021831          109 SLTVGQEVFGALH-PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV  187 (307)
Q Consensus       109 ~~~~Gd~V~~~~~-~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~  187 (307)
                      ++++||+|+++.. .....|.+++|+.++.+.++++|+++++.+++.+..++.++|+++.....+.++++++|+|+++.+
T Consensus        78 ~~~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~  157 (328)
T cd08268          78 GFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSV  157 (328)
T ss_pred             cCCCCCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHH
Confidence            9999999988743 222348999999999999999999999999999999999999999878889999999999999999


Q ss_pred             HHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCC
Q 021831          188 GFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRG  261 (307)
Q Consensus       188 G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~  261 (307)
                      |++++++++..|++++.++++ ++.+.+.++|.+.+++....++.+.+.     .++|+++|++|+. ....++.+++++
T Consensus       158 g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~  236 (328)
T cd08268         158 GLAAIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGP-QFAKLADALAPG  236 (328)
T ss_pred             HHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchH-hHHHHHHhhccC
Confidence            999999999999998888655 345557778888888877655444332     3699999999996 788899999999


Q ss_pred             cEEEEeccC
Q 021831          262 GHYMTLHGE  270 (307)
Q Consensus       262 G~~v~~g~~  270 (307)
                      |+++.+|..
T Consensus       237 g~~v~~g~~  245 (328)
T cd08268         237 GTLVVYGAL  245 (328)
T ss_pred             CEEEEEEeC
Confidence            999999854

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=99.97  E-value=3.2e-28  Score=218.60  Aligned_cols=220  Identities=24%  Similarity=0.318  Sum_probs=183.4

Q ss_pred             CceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHH-hCCCccccCCCCCcccccceEEEEEEecCCCCCCCCCCEEEE
Q 021831           40 PEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMR-SGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFG  118 (307)
Q Consensus        40 ~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~-~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~  118 (307)
                      +++++++ +.+.|++.++||+|++.++++|++|+..+ .|.... .....|.++|+|++|+|+.+|++++++++||+|++
T Consensus         4 ~~~~~~~-~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~-~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~   81 (312)
T cd08269           4 PGRFEVE-EHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWF-VYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG   81 (312)
T ss_pred             CCeeEEE-ECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCc-ccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE
Confidence            3568888 89999999999999999999999999987 663211 11224778999999999999999999999999998


Q ss_pred             ecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHc
Q 021831          119 ALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS  198 (307)
Q Consensus       119 ~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~  198 (307)
                      +..     |+|++|+.++.+.++++|+++  ..++....++.++|+++. ..++++|++|+|+| +|.+|++++++|+.+
T Consensus        82 ~~~-----g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~la~~~  152 (312)
T cd08269          82 LSG-----GAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIG-AGFIGLLFLQLAAAA  152 (312)
T ss_pred             ecC-----CcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHc
Confidence            865     999999999999999999998  233332367889999987 88899999999997 689999999999999


Q ss_pred             CCE-EEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          199 GCH-VSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       199 G~~-Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      |++ |+++.+.+ +...++++|++++++....++.+.+.     .++|++|||.|.......++++|+++|+++.+|..
T Consensus       153 g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~  231 (312)
T cd08269         153 GARRVIAIDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYH  231 (312)
T ss_pred             CCcEEEEECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccC
Confidence            998 88886654 44567889998888876655544432     37999999998776889999999999999999864

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.97  E-value=6.4e-28  Score=217.02  Aligned_cols=234  Identities=30%  Similarity=0.477  Sum_probs=199.6

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++.+..++.+..+.++ +.+.+.+.+++++|++.++++|++|+....+...  .+..+|.++|||++|+|+.+|+++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~v~~vg~~~~   77 (325)
T TIGR02824         1 MKAIEITEPGGPEVLVLV-EVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYP--PPPGASDILGLEVAGEVVAVGEGVS   77 (325)
T ss_pred             CceEEEccCCCcccceEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC--CCCCCCCCccceeEEEEEEeCCCCC
Confidence            688998877777778887 6666778899999999999999999988776432  1233578899999999999999999


Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHH
Q 021831          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG  188 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G  188 (307)
                      ++++||+|++...    +|+|++|+.++.+.++++|+++++.+++.+..++.++|+.+.....+++|++++|+|++|++|
T Consensus        78 ~~~~Gd~V~~~~~----~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g  153 (325)
T TIGR02824        78 RWKVGDRVCALVA----GGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIG  153 (325)
T ss_pred             CCCCCCEEEEccC----CCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHH
Confidence            9999999998742    389999999999999999999999999999999999999987788999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCCc
Q 021831          189 FAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGG  262 (307)
Q Consensus       189 ~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G  262 (307)
                      ++++++++.+|++|+++.+++ +.+.++++|.+.+++....++.+.+.     +++|+++|++|+. ....++.+++++|
T Consensus       154 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~g  232 (325)
T TIGR02824       154 TTAIQLAKAFGARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGS-YLNRNIKALALDG  232 (325)
T ss_pred             HHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchH-HHHHHHHhhccCc
Confidence            999999999999998886654 44557788888888776655544432     3699999999987 7888999999999


Q ss_pred             EEEEeccC
Q 021831          263 HYMTLHGE  270 (307)
Q Consensus       263 ~~v~~g~~  270 (307)
                      +++.+|..
T Consensus       233 ~~v~~g~~  240 (325)
T TIGR02824       233 RIVQIGFQ  240 (325)
T ss_pred             EEEEEecC
Confidence            99999864

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PLN02702 L-idonate 5-dehydrogenase

Probab=99.96  E-value=4.7e-28  Score=222.70  Aligned_cols=235  Identities=23%  Similarity=0.302  Sum_probs=184.0

Q ss_pred             ceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCC
Q 021831           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (307)
Q Consensus        28 ~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v  107 (307)
                      .|++|...    ++.++++ +.+.|.|.++||+||+.++++|++|+.+..|.........+|.++|||++|+|+++|+++
T Consensus        18 ~~~~~~~~----~~~l~~~-~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   92 (364)
T PLN02702         18 NMAAWLVG----VNTLKIQ-PFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEV   92 (364)
T ss_pred             cceEEEec----CCceEEE-eccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCC
Confidence            35555553    3457888 788888999999999999999999999887632211122357889999999999999999


Q ss_pred             CCCCCCCEEEEecCC------------------------CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHH
Q 021831          108 RSLTVGQEVFGALHP------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAW  163 (307)
Q Consensus       108 ~~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~  163 (307)
                      ++|++||+|++....                        ...+|+|++|+.++.+.++++|+++++.+++.. .++.++|
T Consensus        93 ~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~  171 (364)
T PLN02702         93 KHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGV  171 (364)
T ss_pred             CCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHH
Confidence            999999999863210                        012589999999999999999999999888753 3455688


Q ss_pred             HHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCC-ccHHHHHHcCCceEEeCC--ChhHHHHh-----
Q 021831          164 RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGS-KSIDRVLAAGAEQAVDYS--SKDIELAI-----  234 (307)
Q Consensus       164 ~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~-Vi~~~~~-~~~~~~~~~g~~~v~~~~--~~~~~~~~-----  234 (307)
                      +++ ...++.+|++|+|+| .|++|++++++++.+|++ ++++..+ ++.+.++++|+++++++.  ..++.+.+     
T Consensus       172 ~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  249 (364)
T PLN02702        172 HAC-RRANIGPETNVLVMG-AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQK  249 (364)
T ss_pred             HHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhh
Confidence            887 578899999999997 599999999999999995 5555433 345567889998887653  23343322     


Q ss_pred             --cCCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          235 --KGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       235 --~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                        .+++|++||++|+...+..++++++++|+++.+|..
T Consensus       250 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  287 (364)
T PLN02702        250 AMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMG  287 (364)
T ss_pred             hcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccC
Confidence              147999999999766889999999999999999853

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=99.96  E-value=4.1e-28  Score=219.92  Aligned_cols=233  Identities=31%  Similarity=0.395  Sum_probs=194.8

Q ss_pred             eEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCCC
Q 021831           30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS  109 (307)
Q Consensus        30 ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~  109 (307)
                      |++++++.|.  .+++. +.+.|.+.+++++|++.++++|++|+....|...   ...+|.++|||++|+|+++|+++++
T Consensus         1 ~~~~~~~~~~--~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~v~~~g~~~~~   74 (330)
T cd08245           1 KAAVVHAAGG--PLEPE-EVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWG---GSKYPLVPGHEIVGEVVEVGAGVEG   74 (330)
T ss_pred             CeEEEecCCC--CceEE-eccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCC---CCCCCcccCccceEEEEEECCCCcc
Confidence            6788887654  48888 8899989999999999999999999998887432   2346788999999999999999999


Q ss_pred             CCCCCEEEEecC------------------------CCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHH
Q 021831          110 LTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (307)
Q Consensus       110 ~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (307)
                      +++||+|+....                        .....|+|++|+.++.+.++++|+++++.+++.+...+.+||++
T Consensus        75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~  154 (330)
T cd08245          75 RKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSA  154 (330)
T ss_pred             cccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHH
Confidence            999999974211                        01125899999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhcCCccEEEEC
Q 021831          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDT  244 (307)
Q Consensus       166 l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~  244 (307)
                      +.. ..++++++|||+|+ |.+|++++++|+.+|++|+++.+++ +.+.++++|++.+++....+......+++|++||+
T Consensus       155 l~~-~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~vi~~  232 (330)
T cd08245         155 LRD-AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAELDEQAAAGGADVILVT  232 (330)
T ss_pred             HHh-hCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHhccCCCCEEEEC
Confidence            864 78899999999975 7799999999999999998886654 45667888988888766544333223579999999


Q ss_pred             CCChhhHHHHHhcccCCcEEEEeccC
Q 021831          245 IGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       245 ~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      +++......++++++++|+++.+|..
T Consensus       233 ~~~~~~~~~~~~~l~~~G~~i~~~~~  258 (330)
T cd08245         233 VVSGAAAEAALGGLRRGGRIVLVGLP  258 (330)
T ss_pred             CCcHHHHHHHHHhcccCCEEEEECCC
Confidence            88766889999999999999999865

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=99.96  E-value=5.5e-28  Score=220.17  Aligned_cols=224  Identities=26%  Similarity=0.354  Sum_probs=180.5

Q ss_pred             eeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCCCCCCCCEEEEecC
Q 021831           42 VLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALH  121 (307)
Q Consensus        42 ~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~  121 (307)
                      .++++ +.+.|.|.++||+|++.++++|++|+.++.+.........+|.++|+|++|+|+++|++++++++||+|++..+
T Consensus        10 ~~~l~-~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~   88 (340)
T TIGR00692        10 GAELT-EVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETH   88 (340)
T ss_pred             CcEEE-ECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECCc
Confidence            37777 88899999999999999999999999876652111112245678999999999999999999999999987311


Q ss_pred             C-----------------------CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEE
Q 021831          122 P-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRL  178 (307)
Q Consensus       122 ~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~V  178 (307)
                      .                       ....|+|++|+.++.+.++++|+++++.++ +++.++.++++++  ....++|++|
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~~~~g~~v  165 (340)
T TIGR00692        89 IVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAGPISGKSV  165 (340)
T ss_pred             CCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--HccCCCCCEE
Confidence            0                       013489999999999999999999998654 5667888898876  4457799999


Q ss_pred             EEEcCCchHHHHHHHHHHHcCCE-EEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhH
Q 021831          179 LVLGGGGAVGFAAVQFSVASGCH-VSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETE  251 (307)
Q Consensus       179 lI~Ga~g~~G~~~~~~a~~~G~~-Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~  251 (307)
                      +|.| +|.+|++++++++.+|++ |+++.++ ++.+.++++|.++++++...++.+.+.     +++|++||++|+...+
T Consensus       166 lI~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld~~g~~~~~  244 (340)
T TIGR00692       166 LVTG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMSGAPKAL  244 (340)
T ss_pred             EEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEECCCCHHHH
Confidence            9977 599999999999999996 7777443 345567889998888877655554432     4799999999976688


Q ss_pred             HHHHhcccCCcEEEEeccC
Q 021831          252 RLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       252 ~~~~~~l~~~G~~v~~g~~  270 (307)
                      ..++++|+++|+++.+|..
T Consensus       245 ~~~~~~l~~~g~~v~~g~~  263 (340)
T TIGR00692       245 EQGLQAVTPGGRVSLLGLP  263 (340)
T ss_pred             HHHHHhhcCCCEEEEEccC
Confidence            9999999999999999864

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=1.6e-27  Score=215.96  Aligned_cols=234  Identities=32%  Similarity=0.484  Sum_probs=195.8

Q ss_pred             eEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCCC
Q 021831           30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS  109 (307)
Q Consensus        30 ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~  109 (307)
                      |++.+.+++....+.+. +.+.|.|.+++|+|++.++++|++|+....|....  ....|.++|||++|+|+.+|+++++
T Consensus         1 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~   77 (337)
T cd08275           1 RAVVLTGFGGLDKLKVE-KEALPEPSSGEVRVRVEACGLNFADLMARQGLYDS--APKPPFVPGFECAGTVEAVGEGVKD   77 (337)
T ss_pred             CeEEEcCCCCccceEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC--CCCCCCCCcceeEEEEEEECCCCcC
Confidence            46777766666678888 77778889999999999999999999988874322  2245778999999999999999999


Q ss_pred             CCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHH
Q 021831          110 LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGF  189 (307)
Q Consensus       110 ~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~  189 (307)
                      +++||+|+++..    +|.|++|+.++.+.++++|+++++.+++.+.+++.++|+++.....+++|++|+|+|++|.+|+
T Consensus        78 ~~~G~~V~~~~~----~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~  153 (337)
T cd08275          78 FKVGDRVMGLTR----FGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGL  153 (337)
T ss_pred             CCCCCEEEEecC----CCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHH
Confidence            999999998753    3899999999999999999999999999999999999999887889999999999999999999


Q ss_pred             HHHHHHHHc-CCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhc----CCccEEEECCCChhhHHHHHhcccCCcEE
Q 021831          190 AAVQFSVAS-GCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHY  264 (307)
Q Consensus       190 ~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~G~~  264 (307)
                      +++++++.+ +..++...+.++.+.++.+|.+.+++....++.+.+.    +++|+++|++|+. ....++++++++|++
T Consensus       154 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~-~~~~~~~~l~~~g~~  232 (337)
T cd08275         154 AAGQLCKTVPNVTVVGTASASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGE-DTRKSYDLLKPMGRL  232 (337)
T ss_pred             HHHHHHHHccCcEEEEeCCHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhCCCceEEEECCcHH-HHHHHHHhhccCcEE
Confidence            999999998 4344333333355667788988888877655544432    4799999999987 788899999999999


Q ss_pred             EEeccCc
Q 021831          265 MTLHGET  271 (307)
Q Consensus       265 v~~g~~~  271 (307)
                      +.+|...
T Consensus       233 v~~g~~~  239 (337)
T cd08275         233 VVYGAAN  239 (337)
T ss_pred             EEEeecC
Confidence            9998653

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=1.2e-27  Score=209.92  Aligned_cols=212  Identities=35%  Similarity=0.569  Sum_probs=181.1

Q ss_pred             eEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCCCCCCCCEEEEecCC---------------
Q 021831           58 EVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHP---------------  122 (307)
Q Consensus        58 eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~---------------  122 (307)
                      ||+|+|.++++|+.|+....|...  ....+|.++|||++|+|+++|++++.|++||+|++....               
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~   78 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYP--PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGG   78 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCC--cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCC
Confidence            689999999999999999888532  134567889999999999999999999999999987632               


Q ss_pred             ----CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHc
Q 021831          123 ----TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS  198 (307)
Q Consensus       123 ----~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~  198 (307)
                          ....|.|++|+.++.+.++++|+++++.+++.++.++.+||+++.....+++|++|||+|+++ +|++++++++..
T Consensus        79 ~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~  157 (271)
T cd05188          79 GILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAA  157 (271)
T ss_pred             CEeccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHc
Confidence                123589999999999999999999999999999999999999998777779999999999866 999999999999


Q ss_pred             CCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHh----cCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          199 GCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAI----KGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       199 G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~----~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      |.+|+++.++ ++.+.++++|.+++++....++.+.+    .+++|++||++++......++++++++|+++.+|....
T Consensus       158 g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~  236 (271)
T cd05188         158 GARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSG  236 (271)
T ss_pred             CCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCC
Confidence            9999988665 45566788898888887765554443    25799999999994488999999999999999997643

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.96  E-value=4.8e-27  Score=210.96  Aligned_cols=232  Identities=34%  Similarity=0.526  Sum_probs=197.7

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCC-CCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v  107 (307)
                      |+++++..++.+..+++. +.+ |.+. +++++|++.++++|++|+....|....  ....|.++|||++|+|+.+|+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~   76 (323)
T cd08241           1 MKAVVCKELGGPEDLVLE-EVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQV--KPPLPFVPGSEVAGVVEAVGEGV   76 (323)
T ss_pred             CeEEEEecCCCcceeEEe-cCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCC--CCCCCCcccceeEEEEEEeCCCC
Confidence            688999877777778887 676 6666 499999999999999999988774321  12346689999999999999999


Q ss_pred             CCCCCCCEEEEec-CCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCch
Q 021831          108 RSLTVGQEVFGAL-HPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGA  186 (307)
Q Consensus       108 ~~~~~Gd~V~~~~-~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~  186 (307)
                      +.+++||+|+++. .     |++++|+.++.+.++++|++++..+++.+..++.+||+.+.....+++|++|+|+|++|.
T Consensus        77 ~~~~~G~~V~~~~~~-----~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~  151 (323)
T cd08241          77 TGFKVGDRVVALTGQ-----GGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGG  151 (323)
T ss_pred             CCCCCCCEEEEecCC-----ceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCch
Confidence            9999999999986 4     899999999999999999999999988888999999999887888999999999999899


Q ss_pred             HHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccC
Q 021831          187 VGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKR  260 (307)
Q Consensus       187 ~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~  260 (307)
                      +|++++++++..|++|+.+.++ ++.+.++++|.+.+++....++.+.+.     .++|+++|++|+. ....+++++++
T Consensus       152 ~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~-~~~~~~~~~~~  230 (323)
T cd08241         152 VGLAAVQLAKALGARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGD-VFEASLRSLAW  230 (323)
T ss_pred             HHHHHHHHHHHhCCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHH-HHHHHHHhhcc
Confidence            9999999999999998888665 445667788888888877655544433     3799999999986 78889999999


Q ss_pred             CcEEEEeccC
Q 021831          261 GGHYMTLHGE  270 (307)
Q Consensus       261 ~G~~v~~g~~  270 (307)
                      +|+++.+|..
T Consensus       231 ~g~~v~~~~~  240 (323)
T cd08241         231 GGRLLVIGFA  240 (323)
T ss_pred             CCEEEEEccC
Confidence            9999999854

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08251 polyketide_synthase polyketide synthase

Probab=99.96  E-value=5.4e-27  Score=209.06  Aligned_cols=214  Identities=30%  Similarity=0.455  Sum_probs=185.5

Q ss_pred             CCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCCCCCCCCEEEEecCCCCCCCcce
Q 021831           51 VPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYA  130 (307)
Q Consensus        51 ~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~g~~~  130 (307)
                      .|.+.+++++|++.++++|+.|+....|....  ...+|.++|+|++|+|+++|++++++++||+|++...  ..+|+|+
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~--~~~g~~~   77 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPT--MPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG--ESMGGHA   77 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCC--CCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC--CCCccee
Confidence            46788999999999999999999988875322  2356889999999999999999999999999988742  1248999


Q ss_pred             eEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-c
Q 021831          131 DYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-K  209 (307)
Q Consensus       131 ~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~  209 (307)
                      +|+.++.+.++++|+++++.+++.++..+.++|++++ ...+++|++|+|+++++.+|++++++++.+|++++++.+. +
T Consensus        78 ~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~  156 (303)
T cd08251          78 TLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-RAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDD  156 (303)
T ss_pred             eEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHH-hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHH
Confidence            9999999999999999999999999999999999985 7899999999999999999999999999999999888665 4


Q ss_pred             cHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          210 SIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       210 ~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      +.+.++++|.+++++....++.+.+.     .++|+++|++++. ....++++++++|+++.+|..
T Consensus       157 ~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~~~~  221 (303)
T cd08251         157 KLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGE-AIQKGLNCLAPGGRYVEIAMT  221 (303)
T ss_pred             HHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHHhccCcEEEEEecc
Confidence            55667889999999887665554433     3799999999876 788899999999999998754

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=99.95  E-value=1.2e-26  Score=205.96  Aligned_cols=178  Identities=28%  Similarity=0.361  Sum_probs=147.8

Q ss_pred             ccccceEEEEEEecCCCC------CCCCCCEEEEecCCC------------------------------CCCCcceeEEE
Q 021831           91 ILGRDISGEVAAVGASVR------SLTVGQEVFGALHPT------------------------------AVRGTYADYAV  134 (307)
Q Consensus        91 ~~G~e~~G~V~~~G~~v~------~~~~Gd~V~~~~~~~------------------------------~~~g~~~~~~~  134 (307)
                      ++|||++|+|+++|++|+      ++++||||+..+...                              ..+|+|+||+.
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~   80 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH   80 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence            479999999999999999      899999997642110                              13599999999


Q ss_pred             ecCC-ceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeC-CccH
Q 021831          135 LSED-ELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCG-SKSI  211 (307)
Q Consensus       135 ~~~~-~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~-Vi~~~~-~~~~  211 (307)
                      ++.+ .++++|+++++++++.+.+.+.|+|++++ .....+|++|||+|+ |++|++++|+|+.+|++ |+++.. .++.
T Consensus        81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~  158 (280)
T TIGR03366        81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALE-AAGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRR  158 (280)
T ss_pred             ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHH-hccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence            9997 69999999999999999889999999986 455669999999996 99999999999999995 877743 4556


Q ss_pred             HHHHHcCCceEEeCCChh-HHHHh-c-CCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          212 DRVLAAGAEQAVDYSSKD-IELAI-K-GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       212 ~~~~~~g~~~v~~~~~~~-~~~~~-~-~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      +.++++|++++++..... ....+ . .++|++||++|....+..++++++++|+++.+|..
T Consensus       159 ~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~  220 (280)
T TIGR03366       159 ELALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSV  220 (280)
T ss_pred             HHHHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccC
Confidence            778999999988865421 11112 2 37999999999887889999999999999999964

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.95  E-value=2.4e-26  Score=203.08  Aligned_cols=204  Identities=28%  Similarity=0.370  Sum_probs=179.0

Q ss_pred             CeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCCCCCCCCEEEEecCCCCCCCcceeEEEec
Q 021831           57 NEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLS  136 (307)
Q Consensus        57 ~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~  136 (307)
                      +||+|++.++++|++|+....|..     ...|.++|||++|+|+++|+++..+++||+|+++..     |+|++|+.++
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~-----~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~-----g~~~~~~~~~   70 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLL-----PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLAP-----GAFATHVRVD   70 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCC-----CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEec-----CcccceEEec
Confidence            589999999999999999888742     245778999999999999999999999999999865     8999999999


Q ss_pred             CCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHH
Q 021831          137 EDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVL  215 (307)
Q Consensus       137 ~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~  215 (307)
                      .+.++++|+++++.+++.+..++.++|+++.+...+++|++|+|+|++|.+|++++++++.+|++++.+.+.. +.+.++
T Consensus        71 ~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~  150 (293)
T cd05195          71 ARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLR  150 (293)
T ss_pred             hhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            9999999999999999999999999999988788999999999999899999999999999999998887654 455567


Q ss_pred             HcC--CceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          216 AAG--AEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       216 ~~g--~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ..+  ++++++....++.+.+.     .++|+++|++|+. .+..++++++++|+++.+|...
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~  212 (293)
T cd05195         151 ELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGE-LLRASWRCLAPFGRFVEIGKRD  212 (293)
T ss_pred             HhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCch-HHHHHHHhcccCceEEEeeccc
Confidence            777  67788876655544433     3799999999998 8899999999999999998654

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>smart00829 PKS_ER Enoylreductase

Probab=99.94  E-value=2.8e-25  Score=196.16  Aligned_cols=198  Identities=28%  Similarity=0.412  Sum_probs=174.0

Q ss_pred             EEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCce
Q 021831           61 VRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDEL  140 (307)
Q Consensus        61 V~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~  140 (307)
                      ||+.++++|++|+....|..      ..|.++|||++|+|+++|++++.+++||+|+++..     |+|++|+.++.+.+
T Consensus         2 i~v~~~~i~~~d~~~~~g~~------~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~-----g~~~~~~~~~~~~~   70 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLL------PGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAP-----GSFATYVRTDARLV   70 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCC------CCCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEcC-----CceeeEEEccHHHe
Confidence            78999999999999888732      13578999999999999999999999999999875     99999999999999


Q ss_pred             eeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCC
Q 021831          141 TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGA  219 (307)
Q Consensus       141 ~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~  219 (307)
                      +++|+++++.+++.+.+++.++|+++.....+++|++|+|+|+.|.+|++++++++.+|++|++++++ ++.+.++++|.
T Consensus        71 ~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~  150 (288)
T smart00829       71 VPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLRELGI  150 (288)
T ss_pred             EECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC
Confidence            99999999999999999999999998778899999999999999999999999999999999888754 45566788898


Q ss_pred             --ceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          220 --EQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       220 --~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                        ++++++...++.+.+.     +++|+++|++|+. ....++++++++|+++.+|..
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~  207 (288)
T smart00829      151 PDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGE-FLDASLRCLAPGGRFVEIGKR  207 (288)
T ss_pred             ChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHH-HHHHHHHhccCCcEEEEEcCc
Confidence              7788877655554433     3699999999975 788899999999999999865

Enoylreductase in Polyketide synthases.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.94  E-value=4.7e-24  Score=181.86  Aligned_cols=263  Identities=20%  Similarity=0.233  Sum_probs=191.4

Q ss_pred             ceeEEEEccc--CCC--ceeEEcC-cccC-CCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccc----cceE
Q 021831           28 SCRAVVLPRF--GGP--EVLEVRP-NVEV-PDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILG----RDIS   97 (307)
Q Consensus        28 ~~ka~~~~~~--~~~--~~~~~~~-~~~~-p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G----~e~~   97 (307)
                      +.|+|++...  |-|  +.+.+.+ +.++ .++++++|+||.+|-+.+|.....++-..+..  -..|+.+|    ..++
T Consensus         3 ~nkqvvLk~y~~g~P~~~d~~~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~--y~~~~~~G~pi~g~GV   80 (343)
T KOG1196|consen    3 TNKQVILKNYVTGFPTESDFEFTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSD--YAPPYEPGKPIDGFGV   80 (343)
T ss_pred             cccEEEEeccCCCCCccccceeeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCccc--ccCcccCCcEecCCce
Confidence            3455666542  222  3444441 2333 35788999999999999998776554421110  11233333    2678


Q ss_pred             EEEEEecCCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCc--eeeCCCC--CChhh-hccccchHHHHHHHHHHHcCC
Q 021831           98 GEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDE--LTPKPVS--VTHAD-ASAIPFAALTAWRALKCAARM  172 (307)
Q Consensus        98 G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~--~~~ip~~--~~~~~-aa~~~~~~~ta~~~l~~~~~~  172 (307)
                      |+|++  |+.+++++||.|++.       -+|.||.+++.+.  ..+++..  .++-. ...+.++.+|||-++.+.+..
T Consensus        81 ~kVi~--S~~~~~~~GD~v~g~-------~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~p  151 (343)
T KOG1196|consen   81 AKVID--SGHPNYKKGDLVWGI-------VGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSP  151 (343)
T ss_pred             EEEEe--cCCCCCCcCceEEEe-------ccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCC
Confidence            99998  566789999999998       5799999998753  4555543  33222 345677899999999999999


Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HHH-HHcCCceEEeCCCh-hHHHHhc----CCccEEEECC
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV-LAAGAEQAVDYSSK-DIELAIK----GKFDAVLDTI  245 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~-~~~g~~~v~~~~~~-~~~~~~~----~~~dvvid~~  245 (307)
                      ++|++|+|.||+|++|+++.|+|+.+||+|++.+.++++ ..+ .++|.+..+||.++ ++.+.++    .++|+.||++
T Consensus       152 k~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNV  231 (343)
T KOG1196|consen  152 KKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENV  231 (343)
T ss_pred             CCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEecc
Confidence            999999999999999999999999999999999887664 444 56899999999987 6776665    5899999999


Q ss_pred             CChhhHHHHHhcccCCcEEEEeccCcc-----------------cccccccceechhHHHHHHHHHHHhhhhcc
Q 021831          246 GAPETERLGLNFLKRGGHYMTLHGETA-----------------ALADHYGLALGLPIATTVLLKKRMQTWYSY  302 (307)
Q Consensus       246 g~~~~~~~~~~~l~~~G~~v~~g~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (307)
                      |+. ..+..+..|+..|+++.||..+.                 ++....++.+..........-..+..|+++
T Consensus       232 GG~-~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ike  304 (343)
T KOG1196|consen  232 GGK-MLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKE  304 (343)
T ss_pred             CcH-HHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhc
Confidence            999 88999999999999999997763                 444555555555444443333334455554

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.89  E-value=3.8e-22  Score=176.40  Aligned_cols=176  Identities=26%  Similarity=0.330  Sum_probs=148.7

Q ss_pred             ccCCCCCcccccceEEEEEEecCCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHH
Q 021831           83 IFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTA  162 (307)
Q Consensus        83 ~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta  162 (307)
                      ..+.++|.++|||++|+|+++|++++++++||+|++.       +.|++|+.++.+.++++|+++++.+++.+ .++.+|
T Consensus        15 ~~~~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta   86 (277)
T cd08255          15 TEKLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATA   86 (277)
T ss_pred             CccCcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHH
Confidence            3455688999999999999999999999999999886       56899999999999999999999998888 789999


Q ss_pred             HHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCc-cHHHHHHcC-CceEEeCCChhHHHHhcCCcc
Q 021831          163 WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSK-SIDRVLAAG-AEQAVDYSSKDIELAIKGKFD  239 (307)
Q Consensus       163 ~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~-Vi~~~~~~-~~~~~~~~g-~~~v~~~~~~~~~~~~~~~~d  239 (307)
                      |+++. ..++++|++++|+| .|.+|++++++|+.+|++ |+++.+++ +...++++| ++++++......   -..++|
T Consensus        87 ~~~~~-~~~~~~g~~vlI~g-~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~d  161 (277)
T cd08255          87 LNGVR-DAEPRLGERVAVVG-LGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTADEI---GGRGAD  161 (277)
T ss_pred             HHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccchhhh---cCCCCC
Confidence            99986 78899999999997 599999999999999997 98886554 455678888 555554432111   114799


Q ss_pred             EEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          240 AVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       240 vvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ++||+++.......++++++++|+++.+|...
T Consensus       162 ~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~  193 (277)
T cd08255         162 VVIEASGSPSALETALRLLRDRGRVVLVGWYG  193 (277)
T ss_pred             EEEEccCChHHHHHHHHHhcCCcEEEEEeccC
Confidence            99999987668889999999999999998653

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.85  E-value=4.6e-21  Score=186.16  Aligned_cols=252  Identities=22%  Similarity=0.267  Sum_probs=206.8

Q ss_pred             CCCceeEEcCcccCC---CCCCCeEEEEEeeeecChhhHHHHhCCCcccc----CCCCCcccccceEEEEEEecCCCCCC
Q 021831           38 GGPEVLEVRPNVEVP---DLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF----EPLLPLILGRDISGEVAAVGASVRSL  110 (307)
Q Consensus        38 ~~~~~~~~~~~~~~p---~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~----~~~~p~~~G~e~~G~V~~~G~~v~~~  110 (307)
                      |+...++|. +.+..   +..++.=+..|-|+.||..|+....|...+.-    ......++|-|++|+          .
T Consensus      1424 GDlsSlrWi-es~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d 1492 (2376)
T KOG1202|consen 1424 GDLSSLRWI-ESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------D 1492 (2376)
T ss_pred             ccccceeee-ecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------c
Confidence            455677777 66543   34566778899999999999999998642211    123446889999888          5


Q ss_pred             CCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHH
Q 021831          111 TVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFA  190 (307)
Q Consensus       111 ~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~  190 (307)
                      +.|.||+++.+    --++++.+.++.++++.+|+++.+++|++.++.|.|+||++..+..+++|+++||++++|++|++
T Consensus      1493 ~~GrRvM~mvp----AksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQA 1568 (2376)
T KOG1202|consen 1493 ASGRRVMGMVP----AKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQA 1568 (2376)
T ss_pred             CCCcEEEEeee----hhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHH
Confidence            67999999875    36788999999999999999999999999999999999999989999999999999999999999


Q ss_pred             HHHHHHHcCCEEEEEeCCcc-HHHHHH----cCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccC
Q 021831          191 AVQFSVASGCHVSATCGSKS-IDRVLA----AGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKR  260 (307)
Q Consensus       191 ~~~~a~~~G~~Vi~~~~~~~-~~~~~~----~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~  260 (307)
                      ++.+|..+|++|+.++.+++ ++++.+    +...++-|.++.+|...+.     .|+|+|+|+.... .+...++||+.
T Consensus      1569 AIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeE-kLQASiRCLa~ 1647 (2376)
T KOG1202|consen 1569 AIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEE-KLQASIRCLAL 1647 (2376)
T ss_pred             HHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHH-HHHHHHHHHHh
Confidence            99999999999999977655 444432    4456778888888887765     4899999999988 88999999999


Q ss_pred             CcEEEEeccCcc------------cccccccceechhHHHHHHHHHHHhhhhccccc
Q 021831          261 GGHYMTLHGETA------------ALADHYGLALGLPIATTVLLKKRMQTWYSYGIG  305 (307)
Q Consensus       261 ~G~~v~~g~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  305 (307)
                      .|+|..+|....            +....+|+...+....-..+.+......+.|||
T Consensus      1648 ~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIk 1704 (2376)
T KOG1202|consen 1648 HGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIK 1704 (2376)
T ss_pred             cCeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhc
Confidence            999999997754            556778888888877777777777766666665

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.74  E-value=1.5e-17  Score=126.42  Aligned_cols=86  Identities=37%  Similarity=0.573  Sum_probs=72.2

Q ss_pred             CCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCCCCCCCCEEEEecC--------------
Q 021831           56 PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALH--------------  121 (307)
Q Consensus        56 ~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~--------------  121 (307)
                      |+||+|||.++|||++|++++.|.  .......|.++|||++|+|+++|+++++|++||+|+....              
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~--~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~   78 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGG--PPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRP   78 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTS--SSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhc--cccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcc
Confidence            689999999999999999999984  2345788999999999999999999999999999987432              


Q ss_pred             ---------CCCCCCcceeEEEecCCceeeC
Q 021831          122 ---------PTAVRGTYADYAVLSEDELTPK  143 (307)
Q Consensus       122 ---------~~~~~g~~~~~~~~~~~~~~~i  143 (307)
                               ....+|+|+||+.++.++++|+
T Consensus        79 ~~c~~~~~~g~~~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   79 NLCPNPEVLGLGLDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             GGTTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred             ccCCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence                     1236799999999999999875

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.42  E-value=2.1e-12  Score=101.06  Aligned_cols=109  Identities=28%  Similarity=0.373  Sum_probs=88.0

Q ss_pred             hHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhc----C-CccEEEECCCChhhHHHHHhccc
Q 021831          186 AVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIK----G-KFDAVLDTIGAPETERLGLNFLK  259 (307)
Q Consensus       186 ~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~----~-~~dvvid~~g~~~~~~~~~~~l~  259 (307)
                      ++|++++|+|+.+|++|+++.+++ +++.++++|+++++++++.++.+.+.    + ++|+||||+|....++.++++++
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~   80 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLLR   80 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHEE
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHhc
Confidence            589999999999999999997765 56779999999999999987777765    3 79999999997779999999999


Q ss_pred             CCcEEEEeccCc-c-----------cccccccceechhHHHHHHHHH
Q 021831          260 RGGHYMTLHGET-A-----------ALADHYGLALGLPIATTVLLKK  294 (307)
Q Consensus       260 ~~G~~v~~g~~~-~-----------~~~~~~~~~~~~~~~~~~~~~~  294 (307)
                      ++|+++.+|... .           ......+...+......+.++.
T Consensus        81 ~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~  127 (130)
T PF00107_consen   81 PGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQL  127 (130)
T ss_dssp             EEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHH
T ss_pred             cCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHH
Confidence            999999999987 2           3345555555554444444443

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.00  E-value=9.2e-09  Score=97.39  Aligned_cols=205  Identities=21%  Similarity=0.224  Sum_probs=122.8

Q ss_pred             CeEEEEEeee-ecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecC----CCCCCCCCCEEEEecCCCCCCCcce-
Q 021831           57 NEVLVRTRAV-SINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA----SVRSLTVGQEVFGALHPTAVRGTYA-  130 (307)
Q Consensus        57 ~eVlV~v~~~-~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~----~v~~~~~Gd~V~~~~~~~~~~g~~~-  130 (307)
                      .+|+||--+. +.+.+|-.+..-.. ... .. .-+..   +-+|.++..    .+..++.|+.++++.++.....-.+ 
T Consensus        31 ~~V~VE~gAG~~a~fsD~~Y~~aGA-~I~-~~-~~v~~---~diilkV~~P~~~e~~~l~~g~~li~~l~p~~~~~l~~~  104 (509)
T PRK09424         31 FEVVVESGAGQLASFDDAAYREAGA-EIV-DG-AAVWQ---SDIILKVNAPSDDEIALLREGATLVSFIWPAQNPELLEK  104 (509)
T ss_pred             CEEEEeCCCCcCCCCCHHHHHHCCC-EEe-cC-ccccc---CCEEEEeCCCCHHHHHhcCCCCEEEEEeCcccCHHHHHH
Confidence            5788887754 34556766554211 111 11 11232   345554433    2346899999999887533211111 


Q ss_pred             ----eEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHc--------------CCCCCCEEEEEcCCchHHHHHH
Q 021831          131 ----DYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAA--------------RMSEGQRLLVLGGGGAVGFAAV  192 (307)
Q Consensus       131 ----~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~--------------~~~~g~~VlI~Ga~g~~G~~~~  192 (307)
                          ....+.-+.+-++.+.-++.  +...++-...|.++...+              ...++++|+|+|+ |++|++++
T Consensus       105 l~~~~it~ia~e~vpr~sraq~~d--~lssma~IAGy~Av~~aa~~~~~~~~g~~taaG~~pg~kVlViGa-G~iGL~Ai  181 (509)
T PRK09424        105 LAARGVTVLAMDAVPRISRAQSLD--ALSSMANIAGYRAVIEAAHEFGRFFTGQITAAGKVPPAKVLVIGA-GVAGLAAI  181 (509)
T ss_pred             HHHcCCEEEEeecccccccCCCcc--cccchhhhhHHHHHHHHHHHhcccCCCceeccCCcCCCEEEEECC-cHHHHHHH
Confidence                11122223333333322211  222233444555543221              2368999999995 99999999


Q ss_pred             HHHHHcCCEEEEEe-CCccHHHHHHcCCceE-EeCCCh-------------hHHH----Hhc---CCccEEEECCCChh-
Q 021831          193 QFSVASGCHVSATC-GSKSIDRVLAAGAEQA-VDYSSK-------------DIEL----AIK---GKFDAVLDTIGAPE-  249 (307)
Q Consensus       193 ~~a~~~G~~Vi~~~-~~~~~~~~~~~g~~~v-~~~~~~-------------~~~~----~~~---~~~dvvid~~g~~~-  249 (307)
                      +.|+.+|++|+++. +.++++.++++|++++ ++..+.             ++.+    .+.   +++|+||+|+|.+. 
T Consensus       182 ~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~~~~~~gaDVVIetag~pg~  261 (509)
T PRK09424        182 GAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALFAEQAKEVDIIITTALIPGK  261 (509)
T ss_pred             HHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHHHHhccCCCCEEEECCCCCcc
Confidence            99999999988884 4566788999999854 544321             1111    111   46999999999642 


Q ss_pred             ----h-HHHHHhcccCCcEEEEeccC
Q 021831          250 ----T-ERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       250 ----~-~~~~~~~l~~~G~~v~~g~~  270 (307)
                          . ...+++.+++||+++++|.+
T Consensus       262 ~aP~lit~~~v~~mkpGgvIVdvg~~  287 (509)
T PRK09424        262 PAPKLITAEMVASMKPGSVIVDLAAE  287 (509)
T ss_pred             cCcchHHHHHHHhcCCCCEEEEEccC
Confidence                4 48999999999999999975

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=98.60  E-value=6.1e-07  Score=83.10  Aligned_cols=101  Identities=22%  Similarity=0.177  Sum_probs=77.9

Q ss_pred             HHHHHHHHcC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCccHHHHHHcCCceEEeCCChhHHHHhcCCcc
Q 021831          162 AWRALKCAAR-MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC-GSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFD  239 (307)
Q Consensus       162 a~~~l~~~~~-~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d  239 (307)
                      .|.++.+..+ .-+|++|+|.|+ |.+|+.+++.++.+|++|+++. +..+...++.+|++.+ +     ..+.+ .++|
T Consensus       188 ~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-~-----~~e~v-~~aD  259 (413)
T cd00401         188 LIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-T-----MEEAV-KEGD  259 (413)
T ss_pred             hHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-c-----HHHHH-cCCC
Confidence            3455443434 368999999995 9999999999999999988874 4455677888888433 2     12333 4689


Q ss_pred             EEEECCCChhhHHHH-HhcccCCcEEEEeccC
Q 021831          240 AVLDTIGAPETERLG-LNFLKRGGHYMTLHGE  270 (307)
Q Consensus       240 vvid~~g~~~~~~~~-~~~l~~~G~~v~~g~~  270 (307)
                      +||+|+|....+... +.+++++|+++.+|..
T Consensus       260 VVI~atG~~~~i~~~~l~~mk~GgilvnvG~~  291 (413)
T cd00401         260 IFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF  291 (413)
T ss_pred             EEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC
Confidence            999999998777776 9999999999999965

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=98.34  E-value=1.7e-05  Score=67.38  Aligned_cols=133  Identities=20%  Similarity=0.315  Sum_probs=90.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHcCC----ceEEeCCChh-HHHHhc------CCccE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAAGA----EQAVDYSSKD-IELAIK------GKFDA  240 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~g~----~~v~~~~~~~-~~~~~~------~~~dv  240 (307)
                      .++.++|.||++++|.++++.....|++|+.+.|..+ ++. +.+++.    ...+|.++.. ....+.      +.+|+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi   84 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI   84 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence            3578999999999999999999999999999977654 443 566772    3455666542 222222      67999


Q ss_pred             EEECCCChh----------h---------------HHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHHHHH
Q 021831          241 VLDTIGAPE----------T---------------ERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTVLLK  293 (307)
Q Consensus       241 vid~~g~~~----------~---------------~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  293 (307)
                      ++|+.|...          -               ....+..|  +..|++|.+|..........+.-++....+...+.
T Consensus        85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~~fs  164 (246)
T COG4221          85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFS  164 (246)
T ss_pred             EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHHHHHHH
Confidence            999998520          0               12233333  35689999999988777766666666666655555


Q ss_pred             HHHh-hhhcccccc
Q 021831          294 KRMQ-TWYSYGIGC  306 (307)
Q Consensus       294 ~~~~-~~~~~~i~~  306 (307)
                      ..+. ....++|++
T Consensus       165 ~~LR~e~~g~~IRV  178 (246)
T COG4221         165 LGLRQELAGTGIRV  178 (246)
T ss_pred             HHHHHHhcCCCeeE
Confidence            5543 445666664

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.21  E-value=1.1e-05  Score=76.57  Aligned_cols=98  Identities=24%  Similarity=0.371  Sum_probs=72.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCccHHHHHHcCCceE-EeCCC-------------hhHHHH----
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC-GSKSIDRVLAAGAEQA-VDYSS-------------KDIELA----  233 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~-~~~~~~~~~~~g~~~v-~~~~~-------------~~~~~~----  233 (307)
                      .++++|+|+|+ |.+|+++++.++.+|++|++.. +.++++.++++|.+.+ ++..+             .++.+.    
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~  240 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL  240 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence            46799999995 9999999999999999988874 4456677888988653 22211             111110    


Q ss_pred             hc---CCccEEEECC---CChh---hHHHHHhcccCCcEEEEeccCc
Q 021831          234 IK---GKFDAVLDTI---GAPE---TERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       234 ~~---~~~dvvid~~---g~~~---~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +.   .++|++|+|+   |.+.   .....++.|++|+.+|+++...
T Consensus       241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~  287 (511)
T TIGR00561       241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQ  287 (511)
T ss_pred             HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCC
Confidence            11   4799999999   6543   4577799999999999998554

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.19  E-value=4.2e-05  Score=71.18  Aligned_cols=104  Identities=18%  Similarity=0.144  Sum_probs=75.6

Q ss_pred             HHHHHHHHHHcCCC-CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhcCC
Q 021831          160 LTAWRALKCAARMS-EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIKGK  237 (307)
Q Consensus       160 ~ta~~~l~~~~~~~-~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~  237 (307)
                      ...|+++.+..++. .|++|+|.|. |.+|+.+++.++.+|++|+++.... +...+...|+. +.     ++.+.+ .+
T Consensus       196 ~s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~-v~-----~l~eal-~~  267 (425)
T PRK05476        196 ESLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFR-VM-----TMEEAA-EL  267 (425)
T ss_pred             hhhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCE-ec-----CHHHHH-hC
Confidence            34566665443544 8999999994 9999999999999999988875443 33334445654 22     123333 46


Q ss_pred             ccEEEECCCChhhHH-HHHhcccCCcEEEEeccCc
Q 021831          238 FDAVLDTIGAPETER-LGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       238 ~dvvid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~  271 (307)
                      +|+||+++|....+. ..+..+++|+.++.+|...
T Consensus       268 aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d  302 (425)
T PRK05476        268 GDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD  302 (425)
T ss_pred             CCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence            999999999886665 5788999999999999754

>PRK08324 short chain dehydrogenase; Validated

Probab=98.18  E-value=2.1e-05  Score=78.45  Aligned_cols=169  Identities=21%  Similarity=0.230  Sum_probs=95.4

Q ss_pred             CcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe
Q 021831          127 GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC  206 (307)
Q Consensus       127 g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~  206 (307)
                      .++++|..++...++.+ +.++.+++.....+          .....+|+++||+|++|++|+.+++.+...|++|+.+.
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~  453 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLAD  453 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEe
Confidence            34566766676666666 55555555321100          11223689999999999999999999999999998887


Q ss_pred             CCccH-HH-HHHcCC-----ceEEeCCChh-HHHHhc------CCccEEEECCCCh------------------------
Q 021831          207 GSKSI-DR-VLAAGA-----EQAVDYSSKD-IELAIK------GKFDAVLDTIGAP------------------------  248 (307)
Q Consensus       207 ~~~~~-~~-~~~~g~-----~~v~~~~~~~-~~~~~~------~~~dvvid~~g~~------------------------  248 (307)
                      ++... +. ...++.     ....|..+.+ ..+.+.      +++|++|++.|..                        
T Consensus       454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~  533 (681)
T PRK08324        454 LDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGH  533 (681)
T ss_pred             CCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHH
Confidence            65432 22 233332     1223444432 222121      5799999999831                        


Q ss_pred             -hhHHHHHhcccC---CcEEEEeccCcccccccccceechhHHHHHHHHHHHh-hhhcccccc
Q 021831          249 -ETERLGLNFLKR---GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       249 -~~~~~~~~~l~~---~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                       .....++..+++   +|+++.++.............++....+...+-..+. .+..+||++
T Consensus       534 ~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrv  596 (681)
T PRK08324        534 FLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGIRV  596 (681)
T ss_pred             HHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHHHHHHHHHHHHHHhcccCeEE
Confidence             123344556655   6899999876443222222223333333333333332 334456654

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=98.04  E-value=0.00034  Score=62.23  Aligned_cols=167  Identities=12%  Similarity=0.105  Sum_probs=107.2

Q ss_pred             EEEEEecCCCCCCCCCCEEEEecCCCC---------CCC--------------cceeEEEecCCceeeCCCCCChhhhcc
Q 021831           98 GEVAAVGASVRSLTVGQEVFGALHPTA---------VRG--------------TYADYAVLSEDELTPKPVSVTHADASA  154 (307)
Q Consensus        98 G~V~~~G~~v~~~~~Gd~V~~~~~~~~---------~~g--------------~~~~~~~~~~~~~~~ip~~~~~~~aa~  154 (307)
                      ++|++  |.+.++.+|+||+++.++..         ..+              .|-+|..+..+..+.-   -....-+.
T Consensus        39 A~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~~---~~e~~~~L  113 (314)
T PF11017_consen   39 ATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYDP---EREDWQML  113 (314)
T ss_pred             EEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccCc---chhHHHHH
Confidence            55555  88899999999999865321         112              2333444433332211   11122233


Q ss_pred             ccchHHHHHHHHHHHcC--CCCCCEEEEEcCCchHHHHHHHHHH-HcCC-EEEEEeCCccHHHHHHcCC-ceEEeCCChh
Q 021831          155 IPFAALTAWRALKCAAR--MSEGQRLLVLGGGGAVGFAAVQFSV-ASGC-HVSATCGSKSIDRVLAAGA-EQAVDYSSKD  229 (307)
Q Consensus       155 ~~~~~~ta~~~l~~~~~--~~~g~~VlI~Ga~g~~G~~~~~~a~-~~G~-~Vi~~~~~~~~~~~~~~g~-~~v~~~~~~~  229 (307)
                      +...+.|.|-.-+-...  .-..+.|+|.+|++.+++..+..++ ..+. +++++++..+..+.+.+|. +.|+.|++-+
T Consensus       114 lrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N~~Fve~lg~Yd~V~~Yd~i~  193 (314)
T PF11017_consen  114 LRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARNVAFVESLGCYDEVLTYDDID  193 (314)
T ss_pred             HHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcchhhhhccCCceEEeehhhhh
Confidence            33345666644332221  2345788999999999999998888 5554 9999999999999999996 6788775422


Q ss_pred             HHHHhcCCccEEEECCCChhhHHHHHhcccCC-cEEEEeccCc
Q 021831          230 IELAIKGKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGET  271 (307)
Q Consensus       230 ~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~  271 (307)
                        ..-...--+++|..|+......+...++.. -..+.+|...
T Consensus       194 --~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th  234 (314)
T PF11017_consen  194 --SLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH  234 (314)
T ss_pred             --hccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence              111145679999999987777777777654 3466666543

>TIGR00936 ahcY adenosylhomocysteinase

Probab=97.99  E-value=0.00011  Score=68.15  Aligned_cols=102  Identities=17%  Similarity=0.116  Sum_probs=74.0

Q ss_pred             HHHHHHHHcC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CccHHHHHHcCCceEEeCCChhHHHHhcCCcc
Q 021831          162 AWRALKCAAR-MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSIDRVLAAGAEQAVDYSSKDIELAIKGKFD  239 (307)
Q Consensus       162 a~~~l~~~~~-~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d  239 (307)
                      .|.++.+..+ ...|++|+|.| .|.+|+.+++.++.+|++|+++.. ..+...+...|+. +.+     ..+.+ .+.|
T Consensus       181 ~~~~i~r~t~~~l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----leeal-~~aD  252 (406)
T TIGR00936       181 TIDGILRATNLLIAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFR-VMT-----MEEAA-KIGD  252 (406)
T ss_pred             HHHHHHHhcCCCCCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCE-eCC-----HHHHH-hcCC
Confidence            4444443333 36899999999 599999999999999999988743 3333445556653 321     22222 4589


Q ss_pred             EEEECCCChhhHHH-HHhcccCCcEEEEeccCc
Q 021831          240 AVLDTIGAPETERL-GLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       240 vvid~~g~~~~~~~-~~~~l~~~G~~v~~g~~~  271 (307)
                      ++|+++|+...+.. .+..+++++.++.+|...
T Consensus       253 VVItaTG~~~vI~~~~~~~mK~GailiN~G~~~  285 (406)
T TIGR00936       253 IFITATGNKDVIRGEHFENMKDGAIVANIGHFD  285 (406)
T ss_pred             EEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence            99999999866764 888999999999998753

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.92  E-value=0.00027  Score=63.18  Aligned_cols=94  Identities=21%  Similarity=0.318  Sum_probs=71.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhHH
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETER  252 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~~  252 (307)
                      .+.+|+|+|. |.+|+.+++.++.+|++|++..++. +...++++|...+ ..  .++.+.+ .++|+||++++......
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~-~~--~~l~~~l-~~aDiVI~t~p~~~i~~  225 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPF-HL--SELAEEV-GKIDIIFNTIPALVLTK  225 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeee-cH--HHHHHHh-CCCCEEEECCChhhhhH
Confidence            5899999995 9999999999999999988886653 4455677776533 21  2333333 46999999998764446


Q ss_pred             HHHhcccCCcEEEEeccCcc
Q 021831          253 LGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       253 ~~~~~l~~~G~~v~~g~~~~  272 (307)
                      ..+..+++++.++.++..+.
T Consensus       226 ~~l~~~~~g~vIIDla~~pg  245 (296)
T PRK08306        226 EVLSKMPPEALIIDLASKPG  245 (296)
T ss_pred             HHHHcCCCCcEEEEEccCCC
Confidence            67788999999999987653

>PLN02494 adenosylhomocysteinase

Probab=97.89  E-value=0.00016  Score=67.77  Aligned_cols=100  Identities=18%  Similarity=0.131  Sum_probs=74.2

Q ss_pred             HHHHHHHcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhcCCccE
Q 021831          163 WRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIKGKFDA  240 (307)
Q Consensus       163 ~~~l~~~~~~-~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dv  240 (307)
                      +.++.+..++ -.|++|+|.| .|.+|+.+++.++.+|++|+++.... +...+...|+..+      ++.+.+ ...|+
T Consensus       241 ~d~i~r~t~i~LaGKtVvViG-yG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv------~leEal-~~ADV  312 (477)
T PLN02494        241 PDGLMRATDVMIAGKVAVICG-YGDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVL------TLEDVV-SEADI  312 (477)
T ss_pred             HHHHHHhcCCccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeec------cHHHHH-hhCCE
Confidence            4444434343 5799999999 59999999999999999988875543 3344566666422      122322 45899


Q ss_pred             EEECCCChhhH-HHHHhcccCCcEEEEeccC
Q 021831          241 VLDTIGAPETE-RLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       241 vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~  270 (307)
                      +|+++|+...+ ...+..|++++.++.+|..
T Consensus       313 VI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~  343 (477)
T PLN02494        313 FVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF  343 (477)
T ss_pred             EEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence            99999987543 7799999999999999985

>PRK12742 oxidoreductase; Provisional

Probab=97.84  E-value=0.00072  Score=57.94  Aligned_cols=133  Identities=19%  Similarity=0.288  Sum_probs=76.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc--cHHH-HHHcCCceE-EeCCCh-hHHHHhc--CCccEEEECCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK--SIDR-VLAAGAEQA-VDYSSK-DIELAIK--GKFDAVLDTIG  246 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~--~~~~-~~~~g~~~v-~~~~~~-~~~~~~~--~~~dvvid~~g  246 (307)
                      .++++||+|++|++|..+++.+...|++|+.+.+..  +.+. ..+.+...+ .|..+. .+.+.+.  +++|++|++.|
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag   84 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG   84 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence            478999999999999999999999999987764432  2222 234454322 333332 2333332  56899999987


Q ss_pred             Chh-------------------------hHHHHHhcccCCcEEEEeccCccc-ccccccceechhHHHHHHHHHHH-hhh
Q 021831          247 APE-------------------------TERLGLNFLKRGGHYMTLHGETAA-LADHYGLALGLPIATTVLLKKRM-QTW  299 (307)
Q Consensus       247 ~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~  299 (307)
                      ...                         ....++..++.+|+++.++..... ........++........+-+.+ ..+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~  164 (237)
T PRK12742         85 IAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDF  164 (237)
T ss_pred             CCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCCCCcchHHhHHHHHHHHHHHHHHH
Confidence            420                         012344456678999998875442 12222223333444443333333 333


Q ss_pred             hcccccc
Q 021831          300 YSYGIGC  306 (307)
Q Consensus       300 ~~~~i~~  306 (307)
                      ..+||++
T Consensus       165 ~~~gi~v  171 (237)
T PRK12742        165 GPRGITI  171 (237)
T ss_pred             hhhCeEE
Confidence            4556664

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.83  E-value=0.00068  Score=59.79  Aligned_cols=133  Identities=18%  Similarity=0.282  Sum_probs=78.3

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCccH----HH-HHHcCCceE--EeCCChh----HHHHhc---CC
Q 021831          174 EGQRLLVLGGGG--AVGFAAVQFSVASGCHVSATCGSKSI----DR-VLAAGAEQA--VDYSSKD----IELAIK---GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g--~~G~~~~~~a~~~G~~Vi~~~~~~~~----~~-~~~~g~~~v--~~~~~~~----~~~~~~---~~  237 (307)
                      .+.++||+|+++  ++|.++++.+...|++|+...++++.    +. .++.|....  .|..+.+    +.+.+.   +.
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK   85 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            478999999986  99999999998999999887654321    11 233453322  2444332    222221   67


Q ss_pred             ccEEEECCCChh--------------h---------------HHHHHhcccCCcEEEEeccCcccccccccceechhHHH
Q 021831          238 FDAVLDTIGAPE--------------T---------------ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIAT  288 (307)
Q Consensus       238 ~dvvid~~g~~~--------------~---------------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  288 (307)
                      +|++|++.|...              .               ...++..|+.+|++|.++.............++....+
T Consensus        86 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaA  165 (271)
T PRK06505         86 LDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPNYNVMGVAKAA  165 (271)
T ss_pred             CCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCccchhhhhHHH
Confidence            999999987420              0               12344556667999988765443222222233444444


Q ss_pred             HHHHHHHHh-hhhcccccc
Q 021831          289 TVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       289 ~~~~~~~~~-~~~~~~i~~  306 (307)
                      ...+-+.+. .+..+||++
T Consensus       166 l~~l~r~la~el~~~gIrV  184 (271)
T PRK06505        166 LEASVRYLAADYGPQGIRV  184 (271)
T ss_pred             HHHHHHHHHHHHhhcCeEE
Confidence            444444444 556667775

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.82  E-value=0.00019  Score=62.48  Aligned_cols=134  Identities=13%  Similarity=0.236  Sum_probs=84.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHcC----Cc-eE--EeCCChhHHHHh----c---C
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAAG----AE-QA--VDYSSKDIELAI----K---G  236 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~g----~~-~v--~~~~~~~~~~~~----~---~  236 (307)
                      ..+.++||+||++++|...+..+...|..++.+.|+++ +.. ++++.    .. ++  .|.++.+-.+.+    .   .
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~   83 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG   83 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence            45789999999999999999999999999999988765 222 23332    21 23  344443322222    2   2


Q ss_pred             CccEEEECCCChh---------------------hH----HHHHhcc--cCCcEEEEeccCcccccccccceechhHHHH
Q 021831          237 KFDAVLDTIGAPE---------------------TE----RLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATT  289 (307)
Q Consensus       237 ~~dvvid~~g~~~---------------------~~----~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  289 (307)
                      .+|+.||++|-..                     +.    ...+..|  +..|+++.++......+......++....+.
T Consensus        84 ~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~v  163 (265)
T COG0300          84 PIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFV  163 (265)
T ss_pred             cccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHHH
Confidence            6999999988310                     00    1222222  2359999999887766666666666666655


Q ss_pred             HHHHHHHh-hhhcccccc
Q 021831          290 VLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       290 ~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+...+. .....||+|
T Consensus       164 ~~fSeaL~~EL~~~gV~V  181 (265)
T COG0300         164 LSFSEALREELKGTGVKV  181 (265)
T ss_pred             HHHHHHHHHHhcCCCeEE
Confidence            55555544 334446665

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.76  E-value=0.00075  Score=57.86  Aligned_cols=99  Identities=22%  Similarity=0.398  Sum_probs=65.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HHH-HH---cCCceEE--eCCChh-HHHHh---c---CCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV-LA---AGAEQAV--DYSSKD-IELAI---K---GKFD  239 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~-~~---~g~~~v~--~~~~~~-~~~~~---~---~~~d  239 (307)
                      .+++++|.|++|.+|..+++.+...|++|+.+.++++. ..+ ++   .+..+.+  |..+.+ ..+.+   .   +++|
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   83 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID   83 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999999999999999876542 222 22   2222333  333322 22111   1   4689


Q ss_pred             EEEECCCChh-----------------------hHHHHHhcccCCcEEEEeccCcc
Q 021831          240 AVLDTIGAPE-----------------------TERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       240 vvid~~g~~~-----------------------~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      .++.+.|...                       ....++.+++++|+++.++....
T Consensus        84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~  139 (238)
T PRK05786         84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSG  139 (238)
T ss_pred             EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchh
Confidence            9999987521                       13445556677899999987643

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.74  E-value=0.00064  Score=60.03  Aligned_cols=133  Identities=18%  Similarity=0.264  Sum_probs=76.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCceE-EeCCChh-H---HHHh-c---CCccEEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQA-VDYSSKD-I---ELAI-K---GKFDAVLD  243 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~~v-~~~~~~~-~---~~~~-~---~~~dvvid  243 (307)
                      .+.++||+||+|++|...++.+...|++|+.+.++.+ .+.+...+...+ .|..+.+ .   .+.+ .   +.+|++|+
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~   82 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN   82 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence            4678999999999999999998889999999877543 333444444322 3444432 1   2222 1   46899999


Q ss_pred             CCCChh-------------------------hHHHHHhcccC--CcEEEEeccCcccccccccceechhHHHHHHHHHHH
Q 021831          244 TIGAPE-------------------------TERLGLNFLKR--GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM  296 (307)
Q Consensus       244 ~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (307)
                      +.|...                         ....++..++.  .|++|.++.............++....+...+-..+
T Consensus        83 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l  162 (277)
T PRK05993         83 NGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTL  162 (277)
T ss_pred             CCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHHHHHHHH
Confidence            976310                         02345555543  479999987544322222222333333333333333


Q ss_pred             h-hhhcccccc
Q 021831          297 Q-TWYSYGIGC  306 (307)
Q Consensus       297 ~-~~~~~~i~~  306 (307)
                      . .+..+||++
T Consensus       163 ~~el~~~gi~v  173 (277)
T PRK05993        163 RMELQGSGIHV  173 (277)
T ss_pred             HHHhhhhCCEE
Confidence            2 334556654

>PRK08339 short chain dehydrogenase; Provisional

Probab=97.74  E-value=0.0008  Score=58.98  Aligned_cols=133  Identities=13%  Similarity=0.154  Sum_probs=78.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHc----CCc---eEEeCCChh-HHH---Hhc--CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAA----GAE---QAVDYSSKD-IEL---AIK--GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~----g~~---~v~~~~~~~-~~~---~~~--~~~  238 (307)
                      .|.++||.|+++++|++.++.+...|++|+.+.++.+ .+. ..++    +.+   ...|..+.+ ...   .+.  +++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i   86 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP   86 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence            4789999999999999999999999999988876543 221 1111    221   123444332 211   121  578


Q ss_pred             cEEEECCCChh-------------------------hHHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHH
Q 021831          239 DAVLDTIGAPE-------------------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVL  291 (307)
Q Consensus       239 dvvid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  291 (307)
                      |++|++.|...                         ....++..|+  ..|++|.++.............++....+...
T Consensus        87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asKaal~~  166 (263)
T PRK08339         87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAG  166 (263)
T ss_pred             cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHHHHHHH
Confidence            99999987420                         1234555553  34899999876543332222223334444444


Q ss_pred             HHHHHh-hhhcccccc
Q 021831          292 LKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       292 ~~~~~~-~~~~~~i~~  306 (307)
                      +-+.+. .+.++||++
T Consensus       167 l~~~la~el~~~gIrV  182 (263)
T PRK08339        167 LVRTLAKELGPKGITV  182 (263)
T ss_pred             HHHHHHHHhcccCeEE
Confidence            444444 556678875

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.73  E-value=0.0011  Score=57.95  Aligned_cols=133  Identities=19%  Similarity=0.184  Sum_probs=76.3

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCccH----HH-HHHcCCceEE--eCCCh-h---HHHHhc---CC
Q 021831          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKSI----DR-VLAAGAEQAV--DYSSK-D---IELAIK---GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~--g~~G~~~~~~a~~~G~~Vi~~~~~~~~----~~-~~~~g~~~v~--~~~~~-~---~~~~~~---~~  237 (307)
                      .|.++||+||+  +++|.++++.+...|++|+.+.+.++.    +. .++++....+  |..+. +   +.+.+.   +.
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   88 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR   88 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence            47899999987  489999999988899998887665331    11 2233332232  33332 2   222221   57


Q ss_pred             ccEEEECCCChh--------------h---------------HHHHHhcccCCcEEEEeccCcccccccccceechhHHH
Q 021831          238 FDAVLDTIGAPE--------------T---------------ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIAT  288 (307)
Q Consensus       238 ~dvvid~~g~~~--------------~---------------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  288 (307)
                      +|++|++.|...              .               ...++..|+.+|+++.++.............++....+
T Consensus        89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~~~~~Y~asKaa  168 (258)
T PRK07533         89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVENYNLMGPVKAA  168 (258)
T ss_pred             CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCccchhhHHHHHH
Confidence            899999987310              0               13456667778999888765432222222223344444


Q ss_pred             HHHHHHHHh-hhhcccccc
Q 021831          289 TVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       289 ~~~~~~~~~-~~~~~~i~~  306 (307)
                      ...+-+.+. .+..+||++
T Consensus       169 l~~l~~~la~el~~~gI~V  187 (258)
T PRK07533        169 LESSVRYLAAELGPKGIRV  187 (258)
T ss_pred             HHHHHHHHHHHhhhcCcEE
Confidence            444444433 445567765

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.72  E-value=0.0011  Score=58.64  Aligned_cols=133  Identities=17%  Similarity=0.236  Sum_probs=79.2

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCcc----HHH-HHHcCCceE--EeCCChh----HHHHhc---CC
Q 021831          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKS----IDR-VLAAGAEQA--VDYSSKD----IELAIK---GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~--g~~G~~~~~~a~~~G~~Vi~~~~~~~----~~~-~~~~g~~~v--~~~~~~~----~~~~~~---~~  237 (307)
                      .|.++||+||+  +++|+++++.+...|++|+...++++    .+. ..+++....  .|..+.+    +.+.+.   ++
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~   83 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK   83 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            37899999986  79999999988889999988766532    111 233443222  3444432    222221   67


Q ss_pred             ccEEEECCCChh-----------------------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHHH
Q 021831          238 FDAVLDTIGAPE-----------------------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIAT  288 (307)
Q Consensus       238 ~dvvid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  288 (307)
                      +|++|++.|...                             ....++..|+.+|+++.++.............++....+
T Consensus        84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa  163 (274)
T PRK08415         84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPHYNVMGVAKAA  163 (274)
T ss_pred             CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCcchhhhhHHHH
Confidence            999999988410                             013455667778999998865443222222223444444


Q ss_pred             HHHHHHHHh-hhhcccccc
Q 021831          289 TVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       289 ~~~~~~~~~-~~~~~~i~~  306 (307)
                      ...+-+.+. .+..+||++
T Consensus       164 l~~l~~~la~el~~~gIrV  182 (274)
T PRK08415        164 LESSVRYLAVDLGKKGIRV  182 (274)
T ss_pred             HHHHHHHHHHHhhhcCeEE
Confidence            444444444 445667765

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.72  E-value=0.00097  Score=58.67  Aligned_cols=72  Identities=22%  Similarity=0.329  Sum_probs=49.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCceE-EeCCChh-HHHHhc------CCccEEEECCC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQA-VDYSSKD-IELAIK------GKFDAVLDTIG  246 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~~v-~~~~~~~-~~~~~~------~~~dvvid~~g  246 (307)
                      .++||+||+|++|...++.+...|++|+.+.++.+ .+.+...+...+ .|..+.+ +.+.+.      +++|++|++.|
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag   81 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAG   81 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            47999999999999999999999999998876543 333444444322 4555432 222221      57999999998


Q ss_pred             C
Q 021831          247 A  247 (307)
Q Consensus       247 ~  247 (307)
                      .
T Consensus        82 ~   82 (274)
T PRK05693         82 Y   82 (274)
T ss_pred             C
Confidence            3

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.71  E-value=0.00091  Score=64.42  Aligned_cols=103  Identities=20%  Similarity=0.209  Sum_probs=66.1

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHH--------cCC-----ceE--EeCCChhHH
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLA--------AGA-----EQA--VDYSSKDIE  231 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~--------~g~-----~~v--~~~~~~~~~  231 (307)
                      ..+.+.|.++||.||+|.+|..+++.+...|++|+++.+.... .. +..        .|.     ..+  .|..+.+..
T Consensus        74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI  153 (576)
T PLN03209         74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQI  153 (576)
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHH
Confidence            4566789999999999999999999998899999988776432 22 111        121     112  344443322


Q ss_pred             HHhcCCccEEEECCCChh---------------hHHHHHhcccC--CcEEEEeccCc
Q 021831          232 LAIKGKFDAVLDTIGAPE---------------TERLGLNFLKR--GGHYMTLHGET  271 (307)
Q Consensus       232 ~~~~~~~dvvid~~g~~~---------------~~~~~~~~l~~--~G~~v~~g~~~  271 (307)
                      ....+++|+||++.|...               ....+++.+..  .|+||.++...
T Consensus       154 ~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig  210 (576)
T PLN03209        154 GPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG  210 (576)
T ss_pred             HHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence            223367999999987531               12233444432  37999988754

>PRK05872 short chain dehydrogenase; Provisional

Probab=97.71  E-value=0.00079  Score=60.12  Aligned_cols=74  Identities=16%  Similarity=0.254  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHcCC--c-eE--EeCCChh-HH---HHhc---CCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAAGA--E-QA--VDYSSKD-IE---LAIK---GKFD  239 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~g~--~-~v--~~~~~~~-~~---~~~~---~~~d  239 (307)
                      .|.++||+|++|++|+.+++.+...|++|+.+.++.+ .+. .++++.  . ..  .|..+.+ ..   +.+.   +++|
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   87 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID   87 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4789999999999999999999999999988876543 222 344442  1 11  3444432 22   2221   5799


Q ss_pred             EEEECCCC
Q 021831          240 AVLDTIGA  247 (307)
Q Consensus       240 vvid~~g~  247 (307)
                      ++|++.|.
T Consensus        88 ~vI~nAG~   95 (296)
T PRK05872         88 VVVANAGI   95 (296)
T ss_pred             EEEECCCc
Confidence            99999985

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=97.71  E-value=0.00064  Score=59.28  Aligned_cols=143  Identities=19%  Similarity=0.192  Sum_probs=86.3

Q ss_pred             CCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCch
Q 021831          107 VRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGA  186 (307)
Q Consensus       107 v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~  186 (307)
                      ++.+++||+++..+       .|.++.. +...++++++++.+..+.... ... ....+..  ...++++||-+|. |.
T Consensus        64 ~~p~~~g~~~~i~p-------~~~~~~~-~~~~~i~i~p~~afgtg~h~t-t~~-~l~~l~~--~~~~~~~VLDiGc-Gs  130 (250)
T PRK00517         64 FHPIRIGDRLWIVP-------SWEDPPD-PDEINIELDPGMAFGTGTHPT-TRL-CLEALEK--LVLPGKTVLDVGC-GS  130 (250)
T ss_pred             CCCEEEcCCEEEEC-------CCcCCCC-CCeEEEEECCCCccCCCCCHH-HHH-HHHHHHh--hcCCCCEEEEeCC-cH
Confidence            44577899887663       4666644 667789999988776544221 111 2222221  2468999999994 54


Q ss_pred             HHHHHHHHHHHcCC-EEEEEeCCcc-HHHH----HHcCCceEEeCCChhHHHHhcCCccEEEECCCCh---hhHHHHHhc
Q 021831          187 VGFAAVQFSVASGC-HVSATCGSKS-IDRV----LAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAP---ETERLGLNF  257 (307)
Q Consensus       187 ~G~~~~~~a~~~G~-~Vi~~~~~~~-~~~~----~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~---~~~~~~~~~  257 (307)
                       |.+++.+++ .|+ +|+++..+.. .+.+    +..+....+.....+      ..||+|+.+....   ..+..+.+.
T Consensus       131 -G~l~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~~~------~~fD~Vvani~~~~~~~l~~~~~~~  202 (250)
T PRK00517        131 -GILAIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQGD------LKADVIVANILANPLLELAPDLARL  202 (250)
T ss_pred             -HHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEccCC------CCcCEEEEcCcHHHHHHHHHHHHHh
Confidence             877776554 577 6888855443 3333    223331111111110      1599998776543   245678889


Q ss_pred             ccCCcEEEEeccC
Q 021831          258 LKRGGHYMTLHGE  270 (307)
Q Consensus       258 l~~~G~~v~~g~~  270 (307)
                      |++||.++..|..
T Consensus       203 LkpgG~lilsgi~  215 (250)
T PRK00517        203 LKPGGRLILSGIL  215 (250)
T ss_pred             cCCCcEEEEEECc
Confidence            9999999997653

>PRK07985 oxidoreductase; Provisional

Probab=97.70  E-value=0.00075  Score=60.25  Aligned_cols=133  Identities=18%  Similarity=0.187  Sum_probs=77.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc---HHHH----HHcCCc---eEEeCCChh-HHH---Hhc---C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS---IDRV----LAAGAE---QAVDYSSKD-IEL---AIK---G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~---~~~~----~~~g~~---~v~~~~~~~-~~~---~~~---~  236 (307)
                      .+.++||+||++++|.++++.+...|++|+...+..+   .+.+    ++.+..   ...|..+.+ ...   .+.   +
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  127 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG  127 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4679999999999999999999999999887754322   2222    223322   123444332 211   111   5


Q ss_pred             CccEEEECCCChh--------------------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHHHHH
Q 021831          237 KFDAVLDTIGAPE--------------------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       237 ~~dvvid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      ++|+++++.|...                          .+..++..++.+|++|.++.............++....+..
T Consensus       128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~~~Y~asKaal~  207 (294)
T PRK07985        128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAIL  207 (294)
T ss_pred             CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCcchhHHHHHHHH
Confidence            7899999887310                          11344455667899999887654333322233444444444


Q ss_pred             HHHHHHh-hhhcccccc
Q 021831          291 LLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~-~~~~~~i~~  306 (307)
                      .+-+.+. .+..+||++
T Consensus       208 ~l~~~la~el~~~gIrv  224 (294)
T PRK07985        208 NYSRGLAKQVAEKGIRV  224 (294)
T ss_pred             HHHHHHHHHHhHhCcEE
Confidence            4444443 334567765

>PRK06128 oxidoreductase; Provisional

Probab=97.70  E-value=0.00077  Score=60.28  Aligned_cols=133  Identities=16%  Similarity=0.197  Sum_probs=76.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc---HH----HHHHcCCce-E--EeCCChh-HHH---Hhc---C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS---ID----RVLAAGAEQ-A--VDYSSKD-IEL---AIK---G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~---~~----~~~~~g~~~-v--~~~~~~~-~~~---~~~---~  236 (307)
                      .|.++||.|+++++|..++..+...|++|+.+.+..+   .+    .++..+... .  .|..+.+ ..+   .+.   +
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  133 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG  133 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence            4689999999999999999999889999887654322   11    123334321 2  2333322 211   111   5


Q ss_pred             CccEEEECCCCh---h-----------------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHHHHH
Q 021831          237 KFDAVLDTIGAP---E-----------------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       237 ~~dvvid~~g~~---~-----------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      ++|++|++.|..   .                       ....++..++++|++|.++.............++....+..
T Consensus       134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~asK~a~~  213 (300)
T PRK06128        134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTLLDYASTKAAIV  213 (300)
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCchhHHHHHHHHH
Confidence            799999998741   0                       12344555677899999887654322222223334444444


Q ss_pred             HHHHHHh-hhhcccccc
Q 021831          291 LLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~-~~~~~~i~~  306 (307)
                      .+-+.+. .+..+||++
T Consensus       214 ~~~~~la~el~~~gI~v  230 (300)
T PRK06128        214 AFTKALAKQVAEKGIRV  230 (300)
T ss_pred             HHHHHHHHHhhhcCcEE
Confidence            4433333 444567765

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.69  E-value=0.00097  Score=58.03  Aligned_cols=133  Identities=19%  Similarity=0.216  Sum_probs=78.6

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCccHH-HHHHcCCc--eE--EeCCChh----HHHHhc---CCcc
Q 021831          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKSID-RVLAAGAE--QA--VDYSSKD----IELAIK---GKFD  239 (307)
Q Consensus       174 ~g~~VlI~Ga~--g~~G~~~~~~a~~~G~~Vi~~~~~~~~~-~~~~~g~~--~v--~~~~~~~----~~~~~~---~~~d  239 (307)
                      .|.+++|.||+  +++|.+.++.+...|++|+...++++.. .++++...  +.  .|..+.+    +.+.+.   +.+|
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD   85 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKID   85 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            47899999998  7999999999988999998886654322 23332211  12  2333321    222222   5799


Q ss_pred             EEEECCCChh-----------------------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHHHHH
Q 021831          240 AVLDTIGAPE-----------------------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       240 vvid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      ++|++.|...                             ....++..++.+|+++.++.............++....+..
T Consensus        86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~asKaal~  165 (252)
T PRK06079         86 GIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPNYNVMGIAKAALE  165 (252)
T ss_pred             EEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCcchhhHHHHHHHH
Confidence            9999987320                             01334556667899988886554332222223444445554


Q ss_pred             HHHHHHh-hhhcccccc
Q 021831          291 LLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~-~~~~~~i~~  306 (307)
                      .+-+.+. .+..+||++
T Consensus       166 ~l~~~la~el~~~gI~v  182 (252)
T PRK06079        166 SSVRYLARDLGKKGIRV  182 (252)
T ss_pred             HHHHHHHHHhhhcCcEE
Confidence            4444444 445667775

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.69  E-value=0.0011  Score=62.93  Aligned_cols=99  Identities=21%  Similarity=0.269  Sum_probs=64.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHH----HHHcCCc-eEEeCCChhHH----HHhc---CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR----VLAAGAE-QAVDYSSKDIE----LAIK---GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~----~~~~g~~-~v~~~~~~~~~----~~~~---~~~dvv  241 (307)
                      +|.++||+|++|++|...++.+...|++|+.+.++...+.    ..+++.. ...|..+.+-.    +.+.   +++|++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v  288 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV  288 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            5789999999999999999999999999998866433222    2334432 23455553322    2221   468999


Q ss_pred             EECCCCh----------hhHHHH---------------Hh--cccCCcEEEEeccCcc
Q 021831          242 LDTIGAP----------ETERLG---------------LN--FLKRGGHYMTLHGETA  272 (307)
Q Consensus       242 id~~g~~----------~~~~~~---------------~~--~l~~~G~~v~~g~~~~  272 (307)
                      |++.|..          ..+...               +.  .++++|++|.++....
T Consensus       289 i~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~  346 (450)
T PRK08261        289 VHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISG  346 (450)
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhh
Confidence            9998832          122211               12  4567799999986543

>PRK08265 short chain dehydrogenase; Provisional

Probab=97.66  E-value=0.0011  Score=57.84  Aligned_cols=133  Identities=20%  Similarity=0.232  Sum_probs=76.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHcCCc-eE--EeCCChh-HHHHhc------CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAAGAE-QA--VDYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~g~~-~v--~~~~~~~-~~~~~~------~~~dvv  241 (307)
                      .+.++||.|+++++|...++.+...|++|+.+.++.+ .+. .++++.. ..  .|..+.+ ..+.+.      +.+|++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   84 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL   84 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4679999999999999999999999999998876543 222 3444422 12  3444332 222221      578999


Q ss_pred             EECCCChh------------------------hHHHHHhcc-cCCcEEEEeccCcccccccccceechhHHHHHHHHHHH
Q 021831          242 LDTIGAPE------------------------TERLGLNFL-KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM  296 (307)
Q Consensus       242 id~~g~~~------------------------~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (307)
                      |++.|...                        ....++..+ +++|++|.++.............++........+-+.+
T Consensus        85 v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~~~~~l  164 (261)
T PRK08265         85 VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSM  164 (261)
T ss_pred             EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHHHHHHHHH
Confidence            99987410                        112333444 66799999987644322222222333333333333333


Q ss_pred             h-hhhcccccc
Q 021831          297 Q-TWYSYGIGC  306 (307)
Q Consensus       297 ~-~~~~~~i~~  306 (307)
                      . .+..+||++
T Consensus       165 a~e~~~~gi~v  175 (261)
T PRK08265        165 AMDLAPDGIRV  175 (261)
T ss_pred             HHHhcccCEEE
Confidence            2 334556664

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.66  E-value=0.0013  Score=57.37  Aligned_cols=132  Identities=19%  Similarity=0.310  Sum_probs=75.1

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCCccH---HH-HHHcCCc---eEEeCCChh-H---HHHhc---CC
Q 021831          174 EGQRLLVLGG--GGAVGFAAVQFSVASGCHVSATCGSKSI---DR-VLAAGAE---QAVDYSSKD-I---ELAIK---GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga--~g~~G~~~~~~a~~~G~~Vi~~~~~~~~---~~-~~~~g~~---~v~~~~~~~-~---~~~~~---~~  237 (307)
                      .+.+++|.|+  ++++|.++++.+...|++|+.+.++++.   +. ..+++..   ...|..+.+ .   .+.+.   ++
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999998  7999999999888899999888654321   22 2333321   123333322 2   22221   57


Q ss_pred             ccEEEECCCChh-----------------------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHHH
Q 021831          238 FDAVLDTIGAPE-----------------------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIAT  288 (307)
Q Consensus       238 ~dvvid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  288 (307)
                      +|++|++.|...                             ....++..|+++|+++.++.........+. .++....+
T Consensus        86 iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~~~~~~-~Y~asKaa  164 (256)
T PRK07889         86 LDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVAWPAYD-WMGVAKAA  164 (256)
T ss_pred             CcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccccCCccc-hhHHHHHH
Confidence            999999887420                             012455667778998887643211111111 12344444


Q ss_pred             HHHHHHHHh-hhhcccccc
Q 021831          289 TVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       289 ~~~~~~~~~-~~~~~~i~~  306 (307)
                      ...+-+.+. .+..+||++
T Consensus       165 l~~l~~~la~el~~~gIrv  183 (256)
T PRK07889        165 LESTNRYLARDLGPRGIRV  183 (256)
T ss_pred             HHHHHHHHHHHhhhcCeEE
Confidence            444444443 455677775

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.65  E-value=0.001  Score=58.53  Aligned_cols=118  Identities=14%  Similarity=0.282  Sum_probs=74.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHH----HHHcCCce-E----EeCCChh-HHHHh----c--C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDR----VLAAGAEQ-A----VDYSSKD-IELAI----K--G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~----~~~~g~~~-v----~~~~~~~-~~~~~----~--~  236 (307)
                      .|..|+|+||++++|.+++.-.-..|++++.+.+. ++++.    +++.+... +    .|.++.+ ....+    .  +
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg   90 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG   90 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence            47899999999999999888777889977776554 44433    34444433 2    2333332 22111    1  7


Q ss_pred             CccEEEECCCChh-------------------------hHHHHHhcccC-C-cEEEEeccCcccccccccceechhHHHH
Q 021831          237 KFDAVLDTIGAPE-------------------------TERLGLNFLKR-G-GHYMTLHGETAALADHYGLALGLPIATT  289 (307)
Q Consensus       237 ~~dvvid~~g~~~-------------------------~~~~~~~~l~~-~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~  289 (307)
                      ++|+.+|+.|-..                         ....++..|++ + |+|+.++...+....+....+.....++
T Consensus        91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~ASK~Al  170 (282)
T KOG1205|consen   91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSASKHAL  170 (282)
T ss_pred             CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccchHHHHH
Confidence            8999999988421                         11456666754 3 9999999988766555553333333333


Q ss_pred             HH
Q 021831          290 VL  291 (307)
Q Consensus       290 ~~  291 (307)
                      .-
T Consensus       171 ~~  172 (282)
T KOG1205|consen  171 EG  172 (282)
T ss_pred             HH
Confidence            33

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.65  E-value=0.0019  Score=56.46  Aligned_cols=133  Identities=22%  Similarity=0.235  Sum_probs=78.6

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCccH-HHH----HHcCCceE--EeCCChh-H---HHHhc---CC
Q 021831          174 EGQRLLVLGGGG--AVGFAAVQFSVASGCHVSATCGSKSI-DRV----LAAGAEQA--VDYSSKD-I---ELAIK---GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g--~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~----~~~g~~~v--~~~~~~~-~---~~~~~---~~  237 (307)
                      .|..+||.||++  ++|.+.++.+...|++|+...++++. +.+    .+.+....  .|..+.+ .   .+.+.   +.
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS   86 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            478899999986  89999988888889998877654321 112    22343322  3444432 2   22221   57


Q ss_pred             ccEEEECCCChh--------------hH---------------HHHHhcccCCcEEEEeccCcccccccccceechhHHH
Q 021831          238 FDAVLDTIGAPE--------------TE---------------RLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIAT  288 (307)
Q Consensus       238 ~dvvid~~g~~~--------------~~---------------~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  288 (307)
                      +|+++++.|...              .+               ..++..++.+|++|.++.............++....+
T Consensus        87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa  166 (260)
T PRK06603         87 FDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVMGVAKAA  166 (260)
T ss_pred             ccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCcccchhhHHHH
Confidence            999999887310              01               2234456678999998876543322233334455555


Q ss_pred             HHHHHHHHh-hhhcccccc
Q 021831          289 TVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       289 ~~~~~~~~~-~~~~~~i~~  306 (307)
                      ...+-+.+. .+..+||++
T Consensus       167 l~~l~~~la~el~~~gIrV  185 (260)
T PRK06603        167 LEASVKYLANDMGENNIRV  185 (260)
T ss_pred             HHHHHHHHHHHhhhcCeEE
Confidence            555555544 456678875

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.65  E-value=0.0011  Score=57.59  Aligned_cols=133  Identities=13%  Similarity=0.193  Sum_probs=76.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH---HHHHHcCCc---eEEeCCChh-HHHHhc------CCccE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAGAE---QAVDYSSKD-IELAIK------GKFDA  240 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~---~~~~~~g~~---~v~~~~~~~-~~~~~~------~~~dv  240 (307)
                      .|.++||.|+++++|.+.++.+...|++|+.+.+....   ..+++.+.+   ...|..+.+ ..+.+.      +++|+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~   86 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI   86 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47899999999999999999999999999887654322   223344432   123444432 222221      57999


Q ss_pred             EEECCCCh----------hh---------------HHHHHhccc-C--CcEEEEeccCcccccccccceechhHHHHHHH
Q 021831          241 VLDTIGAP----------ET---------------ERLGLNFLK-R--GGHYMTLHGETAALADHYGLALGLPIATTVLL  292 (307)
Q Consensus       241 vid~~g~~----------~~---------------~~~~~~~l~-~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  292 (307)
                      ++++.|..          ..               ...++..+. .  +|++|.++.............++........+
T Consensus        87 lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a~~~l  166 (251)
T PRK12481         87 LINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGL  166 (251)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHHHHHH
Confidence            99998741          01               123333442 2  58999988764432222222344444444444


Q ss_pred             HHHH-hhhhcccccc
Q 021831          293 KKRM-QTWYSYGIGC  306 (307)
Q Consensus       293 ~~~~-~~~~~~~i~~  306 (307)
                      -+.+ ..+..+||++
T Consensus       167 ~~~la~e~~~~girv  181 (251)
T PRK12481        167 TRALATELSQYNINV  181 (251)
T ss_pred             HHHHHHHHhhcCeEE
Confidence            4333 3445667765

>PRK06182 short chain dehydrogenase; Validated

Probab=97.64  E-value=0.0012  Score=58.14  Aligned_cols=74  Identities=20%  Similarity=0.378  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCc-eEEeCCChh-HHHHhc------CCccEEEEC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAE-QAVDYSSKD-IELAIK------GKFDAVLDT  244 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~-~v~~~~~~~-~~~~~~------~~~dvvid~  244 (307)
                      .+.+++|+|++|.+|...++.+...|++|+++.+..+ .+.+...+.. ...|..+.+ +...+.      +++|++|++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~   81 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNN   81 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            3678999999999999999999889999998877543 2223333432 223554432 222222      579999999


Q ss_pred             CCC
Q 021831          245 IGA  247 (307)
Q Consensus       245 ~g~  247 (307)
                      .|.
T Consensus        82 ag~   84 (273)
T PRK06182         82 AGY   84 (273)
T ss_pred             CCc
Confidence            874

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.58  E-value=0.0012  Score=62.15  Aligned_cols=92  Identities=17%  Similarity=0.131  Sum_probs=68.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhh
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET  250 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~  250 (307)
                      .-.|++|+|+| .|.+|..+++.++.+|++|++...... ...+...|+..+      ++.+.+ ...|+|+.++|....
T Consensus       251 ~LaGKtVgVIG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~------~leell-~~ADIVI~atGt~~i  322 (476)
T PTZ00075        251 MIAGKTVVVCG-YGDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVV------TLEDVV-ETADIFVTATGNKDI  322 (476)
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceec------cHHHHH-hcCCEEEECCCcccc
Confidence            34799999999 599999999999999999888744332 223344565321      233333 468999999998755


Q ss_pred             HH-HHHhcccCCcEEEEeccCc
Q 021831          251 ER-LGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       251 ~~-~~~~~l~~~G~~v~~g~~~  271 (307)
                      +. ..+..|++++.++.+|-..
T Consensus       323 I~~e~~~~MKpGAiLINvGr~d  344 (476)
T PTZ00075        323 ITLEHMRRMKNNAIVGNIGHFD  344 (476)
T ss_pred             cCHHHHhccCCCcEEEEcCCCc
Confidence            64 7899999999999998763

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.58  E-value=0.00077  Score=62.20  Aligned_cols=96  Identities=21%  Similarity=0.302  Sum_probs=64.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHH-HHcCCceEEeCCC-hhHHHHhcCCccEEEECCC---C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRV-LAAGAEQAVDYSS-KDIELAIKGKFDAVLDTIG---A  247 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~-~~~g~~~v~~~~~-~~~~~~~~~~~dvvid~~g---~  247 (307)
                      ++.+|+|+|+ |.+|+.+++.++.+|++|+++.++. +.+.+ ..++......... .++.+.+ ..+|++|++++   .
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l-~~aDvVI~a~~~~g~  243 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAV-KRADLLIGAVLIPGA  243 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHH-ccCCEEEEccccCCC
Confidence            3456999995 9999999999999999988876543 33333 3445432222332 2333333 56999999983   2


Q ss_pred             --hh-hHHHHHhcccCCcEEEEeccCc
Q 021831          248 --PE-TERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       248 --~~-~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                        +. .....+..+++++.++.++...
T Consensus       244 ~~p~lit~~~l~~mk~g~vIvDva~d~  270 (370)
T TIGR00518       244 KAPKLVSNSLVAQMKPGAVIVDVAIDQ  270 (370)
T ss_pred             CCCcCcCHHHHhcCCCCCEEEEEecCC
Confidence              11 1366778899999999988554

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.57  E-value=0.00053  Score=57.31  Aligned_cols=99  Identities=21%  Similarity=0.268  Sum_probs=72.6

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-----HHHHHHcCCceEEeCCChhHHHHh-cCCccEE
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-----IDRVLAAGAEQAVDYSSKDIELAI-KGKFDAV  241 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-----~~~~~~~g~~~v~~~~~~~~~~~~-~~~~dvv  241 (307)
                      +...+++|++||-+|  ++.|..++-+++.-| +|+++-+.+.     ++.++.+|...|.....+-+..-. .+.||.+
T Consensus        66 ~~L~~~~g~~VLEIG--tGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G~~~~aPyD~I  142 (209)
T COG2518          66 QLLELKPGDRVLEIG--TGSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKGWPEEAPYDRI  142 (209)
T ss_pred             HHhCCCCCCeEEEEC--CCchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcccCCCCCCCcCEE
Confidence            478999999999999  567999999999888 8888866554     234677887544322221111111 1579999


Q ss_pred             EECCCChhhHHHHHhcccCCcEEEEecc
Q 021831          242 LDTIGAPETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       242 id~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      +-+.+....-..+++.|++||+++..-+
T Consensus       143 ~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG  170 (209)
T COG2518         143 IVTAAAPEVPEALLDQLKPGGRLVIPVG  170 (209)
T ss_pred             EEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence            9888887566889999999999987766

>PRK06398 aldose dehydrogenase; Validated

Probab=97.56  E-value=0.0015  Score=56.94  Aligned_cols=128  Identities=16%  Similarity=0.221  Sum_probs=74.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCc-eEEeCCChh-HHHHhc------CCccEEEECC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE-QAVDYSSKD-IELAIK------GKFDAVLDTI  245 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~-~v~~~~~~~-~~~~~~------~~~dvvid~~  245 (307)
                      .|.++||+|+++++|..++..+...|++|+.+.+++....    ... ...|..+++ ..+.+.      +.+|++|++.
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~A   80 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN----DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNA   80 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC----ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            4689999999999999999999999999998876543211    111 122444432 222221      5799999988


Q ss_pred             CChh-------------------------hHHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHHHHHHHHhh
Q 021831          246 GAPE-------------------------TERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQT  298 (307)
Q Consensus       246 g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (307)
                      |...                         ....++..+  +..|++|.++.............++....+...+-+.+..
T Consensus        81 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~~~~~la~  160 (258)
T PRK06398         81 GIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAV  160 (258)
T ss_pred             CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHHHHHHHHHHHH
Confidence            7410                         112344444  3468999998765433333333444445555555444443


Q ss_pred             hhccccc
Q 021831          299 WYSYGIG  305 (307)
Q Consensus       299 ~~~~~i~  305 (307)
                      ...++|+
T Consensus       161 e~~~~i~  167 (258)
T PRK06398        161 DYAPTIR  167 (258)
T ss_pred             HhCCCCE
Confidence            3333344

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.55  E-value=0.00013  Score=71.23  Aligned_cols=78  Identities=32%  Similarity=0.478  Sum_probs=56.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC----------------------ccHHHHHHcCCceEEeCCC-
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS----------------------KSIDRVLAAGAEQAVDYSS-  227 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~----------------------~~~~~~~~~g~~~v~~~~~-  227 (307)
                      ..++|++|+|+|+ |+.|+++++.++..|++|+++...                      .+.+.++++|++..++... 
T Consensus       133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~  211 (564)
T PRK12771        133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG  211 (564)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence            3578999999995 999999999999999988777432                      1234467889876665432 


Q ss_pred             hhH-HHHhcCCccEEEECCCChh
Q 021831          228 KDI-ELAIKGKFDAVLDTIGAPE  249 (307)
Q Consensus       228 ~~~-~~~~~~~~dvvid~~g~~~  249 (307)
                      .+. .+....++|+||+++|...
T Consensus       212 ~~~~~~~~~~~~D~Vi~AtG~~~  234 (564)
T PRK12771        212 EDITLEQLEGEFDAVFVAIGAQL  234 (564)
T ss_pred             CcCCHHHHHhhCCEEEEeeCCCC
Confidence            221 2223356999999999763

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=97.55  E-value=0.0023  Score=55.87  Aligned_cols=133  Identities=22%  Similarity=0.251  Sum_probs=77.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHH-HHcCCc-eE--EeCCChh-HHHHhc------CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRV-LAAGAE-QA--VDYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~-~~~g~~-~v--~~~~~~~-~~~~~~------~~~dvv  241 (307)
                      .+.++||+|+++++|..+++.+...|++|+.+.++.+ .+.+ ..++.. ..  .|..+.+ ....+.      +.+|++
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   84 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF   84 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4789999999999999999999999999988876543 2222 233321 12  2333322 222111      578999


Q ss_pred             EECCCChh---h---------------------------HHHHHhcc-cCCcEEEEeccCcccccccccceechhHHHHH
Q 021831          242 LDTIGAPE---T---------------------------ERLGLNFL-KRGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       242 id~~g~~~---~---------------------------~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      |++.|...   .                           ...++..+ +.+|++|.++.............++....+..
T Consensus        85 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  164 (263)
T PRK06200         85 VGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGGPLYTASKHAVV  164 (263)
T ss_pred             EECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCCchhHHHHHHHH
Confidence            99987310   0                           12233334 35688998887554333333334555555555


Q ss_pred             HHHHHHhhhhcccccc
Q 021831          291 LLKKRMQTWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~~~~~~~i~~  306 (307)
                      .+-+.+.....++|++
T Consensus       165 ~~~~~la~el~~~Irv  180 (263)
T PRK06200        165 GLVRQLAYELAPKIRV  180 (263)
T ss_pred             HHHHHHHHHHhcCcEE
Confidence            5555554443344553

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.55  E-value=0.0031  Score=55.04  Aligned_cols=133  Identities=19%  Similarity=0.213  Sum_probs=78.1

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCcc----HHH-HHHc-CCc-e--EEeCCChh----HHHHhc---
Q 021831          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKS----IDR-VLAA-GAE-Q--AVDYSSKD----IELAIK---  235 (307)
Q Consensus       174 ~g~~VlI~Ga~--g~~G~~~~~~a~~~G~~Vi~~~~~~~----~~~-~~~~-g~~-~--v~~~~~~~----~~~~~~---  235 (307)
                      .|.+++|.||+  +++|.++++.+...|++|+.+.+..+    .+. ..++ +.. .  ..|..+.+    +.+.+.   
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            47899999986  79999999988889999988755321    122 2233 211 1  23444332    222222   


Q ss_pred             CCccEEEECCCChh-----------------------------hHHHHHhcccCCcEEEEeccCcccccccccceechhH
Q 021831          236 GKFDAVLDTIGAPE-----------------------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPI  286 (307)
Q Consensus       236 ~~~dvvid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  286 (307)
                      +++|++|++.|...                             ....++..++++|++|.++.............++...
T Consensus        86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  165 (257)
T PRK08594         86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNYNVMGVAK  165 (257)
T ss_pred             CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCCCchhHHHH
Confidence            67999999876310                             0123455667789999988765433322223344555


Q ss_pred             HHHHHHHHHHh-hhhcccccc
Q 021831          287 ATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       287 ~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      .+...+-+.+. .+..+||++
T Consensus       166 aal~~l~~~la~el~~~gIrv  186 (257)
T PRK08594        166 ASLEASVKYLANDLGKDGIRV  186 (257)
T ss_pred             HHHHHHHHHHHHHhhhcCCEE
Confidence            55555544444 445667775

>PRK07109 short chain dehydrogenase; Provisional

Probab=97.52  E-value=0.0023  Score=58.28  Aligned_cols=99  Identities=18%  Similarity=0.282  Sum_probs=64.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCce---EEeCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAEQ---AVDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~~---v~~~~~~~-~~~~~~------~~~  238 (307)
                      .+.+++|+||+|++|..+++.+...|++|+.+.++++ .+.    +++.|.+.   ..|..+.+ ..+.+.      +++
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i   86 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI   86 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            4678999999999999999999889999988877543 221    23344432   23444432 222211      579


Q ss_pred             cEEEECCCChh-------------------------hHHHHHhcccC--CcEEEEeccCcc
Q 021831          239 DAVLDTIGAPE-------------------------TERLGLNFLKR--GGHYMTLHGETA  272 (307)
Q Consensus       239 dvvid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~  272 (307)
                      |++|++.|...                         ....++..+.+  .|++|.++....
T Consensus        87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~  147 (334)
T PRK07109         87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALA  147 (334)
T ss_pred             CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhh
Confidence            99999988420                         11234555543  589999987654

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=97.52  E-value=0.0031  Score=55.61  Aligned_cols=133  Identities=23%  Similarity=0.285  Sum_probs=82.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HHH---HHcCCc------eEEeCCChh-HHHHh-------
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRV---LAAGAE------QAVDYSSKD-IELAI-------  234 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~~---~~~g~~------~v~~~~~~~-~~~~~-------  234 (307)
                      .|..+||+|++.++|.+.+..+..+|++|+.+.++.+.  ..+   ...+..      .+.|..+.+ ..+.+       
T Consensus         7 ~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~   86 (270)
T KOG0725|consen    7 AGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKF   86 (270)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHh
Confidence            57889999999999999999999999999998776543  212   222221      223343322 22111       


Q ss_pred             cCCccEEEECCCChhh-----------H----------------HHHHhccc--CCcEEEEeccCccccccccc-ceech
Q 021831          235 KGKFDAVLDTIGAPET-----------E----------------RLGLNFLK--RGGHYMTLHGETAALADHYG-LALGL  284 (307)
Q Consensus       235 ~~~~dvvid~~g~~~~-----------~----------------~~~~~~l~--~~G~~v~~g~~~~~~~~~~~-~~~~~  284 (307)
                      .++.|+.+++.|....           +                ..+...+.  .+|.++.+............ ..++.
T Consensus        87 ~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~~Y~~  166 (270)
T KOG0725|consen   87 FGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGVAYGV  166 (270)
T ss_pred             CCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcccchh
Confidence            1679999999885310           0                12222333  47888888876554333332 55566


Q ss_pred             hHHHHHHHHHH-Hhhhhcccccc
Q 021831          285 PIATTVLLKKR-MQTWYSYGIGC  306 (307)
Q Consensus       285 ~~~~~~~~~~~-~~~~~~~~i~~  306 (307)
                      ...+.+.+-+. ...|.+|||++
T Consensus       167 sK~al~~ltr~lA~El~~~gIRv  189 (270)
T KOG0725|consen  167 SKAALLQLTRSLAKELAKHGIRV  189 (270)
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEE
Confidence            66666555555 55888889986

>PRK07062 short chain dehydrogenase; Provisional

Probab=97.52  E-value=0.0034  Score=54.80  Aligned_cols=133  Identities=20%  Similarity=0.296  Sum_probs=76.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHc--CCc---eEEeCCChh-H---HHHhc---C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAA--GAE---QAVDYSSKD-I---ELAIK---G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~--g~~---~v~~~~~~~-~---~~~~~---~  236 (307)
                      .|.++||.|+++++|...++.+...|++|+.+.++.+ .+.    +.+.  +..   ...|..+.+ .   .+.+.   +
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999999999999998876543 221    1221  111   122444432 2   22221   5


Q ss_pred             CccEEEECCCChh----------h---------------HHHHHhccc--CCcEEEEeccCcccccccccceechhHHHH
Q 021831          237 KFDAVLDTIGAPE----------T---------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATT  289 (307)
Q Consensus       237 ~~dvvid~~g~~~----------~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  289 (307)
                      .+|++|++.|...          .               ...++..++  ..|+++.++.............++....+.
T Consensus        87 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~asKaal  166 (265)
T PRK07062         87 GVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGL  166 (265)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHHHHHH
Confidence            7899999988410          0               122333343  358999988765433322333334444444


Q ss_pred             HHHHHHHh-hhhcccccc
Q 021831          290 VLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       290 ~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+.+.+. .+..+||++
T Consensus       167 ~~~~~~la~e~~~~gi~v  184 (265)
T PRK07062        167 LNLVKSLATELAPKGVRV  184 (265)
T ss_pred             HHHHHHHHHHhhhcCeEE
Confidence            44444333 344556664

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=97.51  E-value=5e-05  Score=58.75  Aligned_cols=50  Identities=32%  Similarity=0.583  Sum_probs=37.6

Q ss_pred             cCCceEEeCCChhHHHHhcCCccEEEECCC--ChhhHHHHHhcccCCcEEEEecc
Q 021831          217 AGAEQAVDYSSKDIELAIKGKFDAVLDTIG--APETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       217 ~g~~~v~~~~~~~~~~~~~~~~dvvid~~g--~~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      +|+++++||+..++  .-.++||+|||++|  +...+..+.++| ++|+++.++.
T Consensus         1 LGAd~vidy~~~~~--~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~   52 (127)
T PF13602_consen    1 LGADEVIDYRDTDF--AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG   52 (127)
T ss_dssp             CT-SEEEETTCSHH--HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S
T ss_pred             CCcCEEecCCCccc--cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC
Confidence            68999999998777  21268999999999  664557777888 9999999995

>PRK07063 short chain dehydrogenase; Provisional

Probab=97.49  E-value=0.0024  Score=55.61  Aligned_cols=133  Identities=17%  Similarity=0.206  Sum_probs=76.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHc-----CCc-eE--EeCCChh-HHHHhc------C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAA-----GAE-QA--VDYSSKD-IELAIK------G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~-----g~~-~v--~~~~~~~-~~~~~~------~  236 (307)
                      .+.++||.|+++++|..+++.+...|++|+.+.+..+. +. ..++     +.. ..  .|..+.+ ..+.+.      +
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   85 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG   85 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999999888765432 21 2221     221 12  2333322 222221      5


Q ss_pred             CccEEEECCCChh-------------------------hHHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHH
Q 021831          237 KFDAVLDTIGAPE-------------------------TERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATT  289 (307)
Q Consensus       237 ~~dvvid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  289 (307)
                      .+|++|++.|...                         ....++..+  +..|++|.++.............++....+.
T Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~  165 (260)
T PRK07063         86 PLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGL  165 (260)
T ss_pred             CCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHHHHH
Confidence            7999999988410                         012333334  2358999988764432222222334444444


Q ss_pred             HHHHHHHh-hhhcccccc
Q 021831          290 VLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       290 ~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+-+.+. .+.++||++
T Consensus       166 ~~~~~~la~el~~~gIrv  183 (260)
T PRK07063        166 LGLTRALGIEYAARNVRV  183 (260)
T ss_pred             HHHHHHHHHHhCccCeEE
Confidence            44444443 445567765

>PRK08589 short chain dehydrogenase; Validated

Probab=97.49  E-value=0.0028  Score=55.72  Aligned_cols=133  Identities=20%  Similarity=0.313  Sum_probs=77.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHH-H---HHcCCc---eEEeCCChh-HH---HHhc---CCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR-V---LAAGAE---QAVDYSSKD-IE---LAIK---GKFD  239 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~-~---~~~g~~---~v~~~~~~~-~~---~~~~---~~~d  239 (307)
                      .+.++||.|+++++|...++.+...|++|+.+.++++.+. +   ++.+..   ...|..+.+ ..   +.+.   +++|
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id   84 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVD   84 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcC
Confidence            4789999999999999999988889999999877643222 2   222321   223444432 22   2221   5789


Q ss_pred             EEEECCCChh-----------hH---------------HHHHhcc-cCCcEEEEeccCcccccccccceechhHHHHHHH
Q 021831          240 AVLDTIGAPE-----------TE---------------RLGLNFL-KRGGHYMTLHGETAALADHYGLALGLPIATTVLL  292 (307)
Q Consensus       240 vvid~~g~~~-----------~~---------------~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  292 (307)
                      ++|++.|...           .+               ..++..+ +.+|+++.++.............++....+...+
T Consensus        85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l  164 (272)
T PRK08589         85 VLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADLYRSGYNAAKGAVINF  164 (272)
T ss_pred             EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCCCCchHHHHHHHHHHH
Confidence            9999987420           01               1233444 4568999998765433333333344444444444


Q ss_pred             HHHHh-hhhcccccc
Q 021831          293 KKRMQ-TWYSYGIGC  306 (307)
Q Consensus       293 ~~~~~-~~~~~~i~~  306 (307)
                      -+.+. .+..+||++
T Consensus       165 ~~~la~e~~~~gI~v  179 (272)
T PRK08589        165 TKSIAIEYGRDGIRA  179 (272)
T ss_pred             HHHHHHHhhhcCeEE
Confidence            44443 334556764

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.49  E-value=0.0017  Score=58.51  Aligned_cols=146  Identities=16%  Similarity=0.156  Sum_probs=89.2

Q ss_pred             ceeeCCCCCChhhhccccchHHHHHHHHHHHcC---CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCcc--HH
Q 021831          139 ELTPKPVSVTHADASAIPFAALTAWRALKCAAR---MSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS--ID  212 (307)
Q Consensus       139 ~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~---~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~--~~  212 (307)
                      ..+++|+.+..+.++... +...++.++.....   --++++|+|+|+ |.+|+.+++.++..|+ +|+.+.++.+  ..
T Consensus       140 ~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~  217 (311)
T cd05213         140 KAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEE  217 (311)
T ss_pred             HHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence            456778887776666553 45556666542222   147899999995 9999999999998887 6666666543  34


Q ss_pred             HHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhh---HHHHHhccc-CCcEEEEeccCcccccc---cccceechh
Q 021831          213 RVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET---ERLGLNFLK-RGGHYMTLHGETAALAD---HYGLALGLP  285 (307)
Q Consensus       213 ~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~---~~~~~~~l~-~~G~~v~~g~~~~~~~~---~~~~~~~~~  285 (307)
                      .++++|.. +.+.  .++.+.+ ..+|+||.+++.+..   ...++.... ++=.++.++.|....+.   ..++.+...
T Consensus       218 la~~~g~~-~~~~--~~~~~~l-~~aDvVi~at~~~~~~~~~~~~~~~~~~~~~~viDlavPrdi~~~v~~l~~v~l~~v  293 (311)
T cd05213         218 LAKELGGN-AVPL--DELLELL-NEADVVISATGAPHYAKIVERAMKKRSGKPRLIVDLAVPRDIEPEVGELEGVRLYTI  293 (311)
T ss_pred             HHHHcCCe-EEeH--HHHHHHH-hcCCEEEECCCCCchHHHHHHHHhhCCCCCeEEEEeCCCCCCchhhccCCCcEEEEH
Confidence            56777763 3332  2333333 458999999998744   222222221 22356788887653332   234545444


Q ss_pred             HHHHH
Q 021831          286 IATTV  290 (307)
Q Consensus       286 ~~~~~  290 (307)
                      ..-..
T Consensus       294 Ddl~~  298 (311)
T cd05213         294 DDLEE  298 (311)
T ss_pred             HHhHH
Confidence            44333

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK06139 short chain dehydrogenase; Provisional

Probab=97.47  E-value=0.0029  Score=57.48  Aligned_cols=74  Identities=19%  Similarity=0.393  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HH----HHHHcCCce---EEeCCChh-HHH---Hhc---CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-ID----RVLAAGAEQ---AVDYSSKD-IEL---AIK---GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~----~~~~~g~~~---v~~~~~~~-~~~---~~~---~~~  238 (307)
                      .+.++||+||++++|.+.++.+...|++|+.+.++++ .+    .+++.+.+.   ..|.++.+ ..+   .+.   +++
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI   85 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            4689999999999999999999999999988877543 22    123445432   23444432 222   111   579


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|++.|.
T Consensus        86 D~lVnnAG~   94 (330)
T PRK06139         86 DVWVNNVGV   94 (330)
T ss_pred             CEEEECCCc
Confidence            999999883

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.47  E-value=0.0044  Score=54.32  Aligned_cols=133  Identities=23%  Similarity=0.286  Sum_probs=76.7

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCccH-HHHHH----cCCceE--EeCCChh-HH---HHhc---CC
Q 021831          174 EGQRLLVLGGGG--AVGFAAVQFSVASGCHVSATCGSKSI-DRVLA----AGAEQA--VDYSSKD-IE---LAIK---GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g--~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~~~----~g~~~v--~~~~~~~-~~---~~~~---~~  237 (307)
                      .|.++||+||++  ++|.++++.+...|++|+...++++. +.+++    .+....  .|..+.+ ..   +.+.   +.
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   84 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK   84 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence            478999999975  89999988888899998877655321 22222    222222  2443322 22   2221   57


Q ss_pred             ccEEEECCCCh---------------hh---------------HHHHHhcccCCcEEEEeccCcccccccccceechhHH
Q 021831          238 FDAVLDTIGAP---------------ET---------------ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIA  287 (307)
Q Consensus       238 ~dvvid~~g~~---------------~~---------------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  287 (307)
                      +|++|++.|..               +.               ...+...++.+|+++.++.............++....
T Consensus        85 iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~asKa  164 (262)
T PRK07984         85 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKA  164 (262)
T ss_pred             CCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcchhHHHHH
Confidence            89999998731               00               0223344567799988887554332222233444455


Q ss_pred             HHHHHHHHHh-hhhcccccc
Q 021831          288 TTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       288 ~~~~~~~~~~-~~~~~~i~~  306 (307)
                      +...+-+.+. .+..+||++
T Consensus       165 al~~l~~~la~el~~~gIrV  184 (262)
T PRK07984        165 SLEANVRYMANAMGPEGVRV  184 (262)
T ss_pred             HHHHHHHHHHHHhcccCcEE
Confidence            5555555544 445667775

>PRK07576 short chain dehydrogenase; Provisional

Probab=97.47  E-value=0.0023  Score=56.06  Aligned_cols=73  Identities=23%  Similarity=0.406  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eE--EeCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QA--VDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v--~~~~~~~-~~~~~~------~~~  238 (307)
                      ++.++||.||+|++|...++.+...|++|+.+.++.+. ..    +.+.+.. ..  .|.++.+ ....+.      +++
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i   87 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI   87 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999998999999998765432 11    2222322 22  3444332 222111      468


Q ss_pred             cEEEECCC
Q 021831          239 DAVLDTIG  246 (307)
Q Consensus       239 dvvid~~g  246 (307)
                      |++|.+.|
T Consensus        88 D~vi~~ag   95 (264)
T PRK07576         88 DVLVSGAA   95 (264)
T ss_pred             CEEEECCC
Confidence            99999876

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.46  E-value=0.0023  Score=55.19  Aligned_cols=74  Identities=27%  Similarity=0.395  Sum_probs=48.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHcC--C-ceEE--eCCCh-hHHHHhc------CCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAG--A-EQAV--DYSSK-DIELAIK------GKFD  239 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~g--~-~~v~--~~~~~-~~~~~~~------~~~d  239 (307)
                      .+.++||+||+|.+|..+++.+...|++|+.+.++... .. ...+.  . ...+  |..+. ++...+.      +.+|
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   83 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD   83 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            46799999999999999999998899999988776532 22 22222  1 1122  33332 2222211      4789


Q ss_pred             EEEECCCC
Q 021831          240 AVLDTIGA  247 (307)
Q Consensus       240 vvid~~g~  247 (307)
                      ++|.+.|.
T Consensus        84 ~vi~~ag~   91 (251)
T PRK07231         84 ILVNNAGT   91 (251)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK06179 short chain dehydrogenase; Provisional

Probab=97.45  E-value=0.0028  Score=55.49  Aligned_cols=72  Identities=21%  Similarity=0.367  Sum_probs=47.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCc-eEEeCCCh-hHHHHhc------CCccEEEECCC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE-QAVDYSSK-DIELAIK------GKFDAVLDTIG  246 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~-~v~~~~~~-~~~~~~~------~~~dvvid~~g  246 (307)
                      +.+++|+|++|.+|..+++.+...|++|+++.++...... ..+.. ...|..+. ++.+.+.      +.+|++|++.|
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag   82 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-IPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAG   82 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence            5689999999999999999888899999988775332111 11221 22344443 2222222      57899999998


Q ss_pred             C
Q 021831          247 A  247 (307)
Q Consensus       247 ~  247 (307)
                      .
T Consensus        83 ~   83 (270)
T PRK06179         83 V   83 (270)
T ss_pred             C
Confidence            4

>PRK06484 short chain dehydrogenase; Validated

Probab=97.45  E-value=0.0029  Score=61.10  Aligned_cols=133  Identities=21%  Similarity=0.318  Sum_probs=81.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHcCCc---eEEeCCChh-HHH---Hhc---CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAAGAE---QAVDYSSKD-IEL---AIK---GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~g~~---~v~~~~~~~-~~~---~~~---~~~dvv  241 (307)
                      .|.++||+||++++|+..++.+...|++|+.+.++.+ .+. .++.+..   ...|..+.+ ..+   .+.   +.+|++
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  347 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL  347 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999999999999998876543 232 2334432   223444432 222   221   579999


Q ss_pred             EECCCChh-----------h---------------HHHHHhcccCCcEEEEeccCcccccccccceechhHHHHHHHHHH
Q 021831          242 LDTIGAPE-----------T---------------ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKR  295 (307)
Q Consensus       242 id~~g~~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (307)
                      |++.|...           .               ...++..++.+|++|.++.............++........+-+.
T Consensus       348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~  427 (520)
T PRK06484        348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRS  427 (520)
T ss_pred             EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCCchhHHHHHHHHHHHHH
Confidence            99987420           0               134445566779999998765543333333444445555544444


Q ss_pred             Hh-hhhcccccc
Q 021831          296 MQ-TWYSYGIGC  306 (307)
Q Consensus       296 ~~-~~~~~~i~~  306 (307)
                      +. .+..+||++
T Consensus       428 la~e~~~~gI~v  439 (520)
T PRK06484        428 LACEWAPAGIRV  439 (520)
T ss_pred             HHHHhhhhCeEE
Confidence            43 344556664

>PRK07832 short chain dehydrogenase; Provisional

Probab=97.44  E-value=0.0048  Score=54.23  Aligned_cols=71  Identities=27%  Similarity=0.337  Sum_probs=46.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc----eEEeCCChhH----HHHhc---CCccE
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE----QAVDYSSKDI----ELAIK---GKFDA  240 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~----~v~~~~~~~~----~~~~~---~~~dv  240 (307)
                      +++|+||+|++|..+++.+...|++|+.+.++.+. +.    ++..+..    ...|.++.+.    .+.+.   +++|+
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV   81 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            68999999999999999998999998887665432 11    2223332    1245544322    12221   56899


Q ss_pred             EEECCCC
Q 021831          241 VLDTIGA  247 (307)
Q Consensus       241 vid~~g~  247 (307)
                      +|++.|.
T Consensus        82 lv~~ag~   88 (272)
T PRK07832         82 VMNIAGI   88 (272)
T ss_pred             EEECCCC
Confidence            9999974

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=97.43  E-value=0.0039  Score=54.44  Aligned_cols=133  Identities=17%  Similarity=0.153  Sum_probs=77.7

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCcc----HHHHHHc----CCceE--EeCCChh----HHHHhc--
Q 021831          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKS----IDRVLAA----GAEQA--VDYSSKD----IELAIK--  235 (307)
Q Consensus       174 ~g~~VlI~Ga~--g~~G~~~~~~a~~~G~~Vi~~~~~~~----~~~~~~~----g~~~v--~~~~~~~----~~~~~~--  235 (307)
                      .|.+++|.||+  +++|.+.++.+...|++|+...++.+    .+.+.++    +....  .|.++.+    +.+.+.  
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            47899999985  79999999988889999877643221    1222221    21112  3443322    222221  


Q ss_pred             -CCccEEEECCCChh------h-----------------------HHHHHhcccCCcEEEEeccCcccccccccceechh
Q 021831          236 -GKFDAVLDTIGAPE------T-----------------------ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLP  285 (307)
Q Consensus       236 -~~~dvvid~~g~~~------~-----------------------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  285 (307)
                       +++|++|++.|...      .                       ...++..|+.+|+++.++.............++..
T Consensus        85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~as  164 (258)
T PRK07370         85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPNYNVMGVA  164 (258)
T ss_pred             cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCcccchhhHH
Confidence             57999999987320      0                       13455667778999998876543333333334555


Q ss_pred             HHHHHHHHHHHh-hhhcccccc
Q 021831          286 IATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       286 ~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+...+-+.+. .+..+||++
T Consensus       165 Kaal~~l~~~la~el~~~gI~V  186 (258)
T PRK07370        165 KAALEASVRYLAAELGPKNIRV  186 (258)
T ss_pred             HHHHHHHHHHHHHHhCcCCeEE
Confidence            555555555444 445667765

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.43  E-value=0.0041  Score=54.85  Aligned_cols=133  Identities=21%  Similarity=0.242  Sum_probs=76.7

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCceE--EeCCChh----HHHHhc---CC
Q 021831          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAEQA--VDYSSKD----IELAIK---GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~--g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~~v--~~~~~~~----~~~~~~---~~  237 (307)
                      .|.++||.|++  +++|++.++.+...|++|+.+.++++ .+.    .++++....  .|..+.+    +.+.+.   +.
T Consensus         9 ~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   88 (272)
T PRK08159          9 AGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGK   88 (272)
T ss_pred             cCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            57899999986  79999999999899999887755432 121    233443222  3333322    222222   57


Q ss_pred             ccEEEECCCChh--------------h---------------HHHHHhcccCCcEEEEeccCcccccccccceechhHHH
Q 021831          238 FDAVLDTIGAPE--------------T---------------ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIAT  288 (307)
Q Consensus       238 ~dvvid~~g~~~--------------~---------------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  288 (307)
                      +|++|++.|...              .               ...++..++.+|+++.++.............++....+
T Consensus        89 iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~~~~Y~asKaa  168 (272)
T PRK08159         89 LDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPHYNVMGVAKAA  168 (272)
T ss_pred             CcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCcchhhhhHHHH
Confidence            899999987320              0               12345566678999988865432222222223344444


Q ss_pred             HHHHHHHH-hhhhcccccc
Q 021831          289 TVLLKKRM-QTWYSYGIGC  306 (307)
Q Consensus       289 ~~~~~~~~-~~~~~~~i~~  306 (307)
                      ...+-+.+ ..+..+||++
T Consensus       169 l~~l~~~la~el~~~gIrV  187 (272)
T PRK08159        169 LEASVKYLAVDLGPKNIRV  187 (272)
T ss_pred             HHHHHHHHHHHhcccCeEE
Confidence            44444443 3455667775

>PRK07831 short chain dehydrogenase; Provisional

Probab=97.42  E-value=0.0054  Score=53.51  Aligned_cols=134  Identities=19%  Similarity=0.291  Sum_probs=75.6

Q ss_pred             CCCCEEEEEcCCc-hHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHH-cCCceE----EeCCChh-HHHHhc-----
Q 021831          173 SEGQRLLVLGGGG-AVGFAAVQFSVASGCHVSATCGSKS-IDR----VLA-AGAEQA----VDYSSKD-IELAIK-----  235 (307)
Q Consensus       173 ~~g~~VlI~Ga~g-~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~-~g~~~v----~~~~~~~-~~~~~~-----  235 (307)
                      ..+.++||+|++| ++|.++++.+...|++|+.+.+..+ .+.    +++ ++...+    .|..+.+ ..+.+.     
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4578999999985 8999999999999999888765443 222    112 343222    2444332 222111     


Q ss_pred             -CCccEEEECCCChh----------hH---------------HHHHhccc--C-CcEEEEeccCcccccccccceechhH
Q 021831          236 -GKFDAVLDTIGAPE----------TE---------------RLGLNFLK--R-GGHYMTLHGETAALADHYGLALGLPI  286 (307)
Q Consensus       236 -~~~dvvid~~g~~~----------~~---------------~~~~~~l~--~-~G~~v~~g~~~~~~~~~~~~~~~~~~  286 (307)
                       +++|++|++.|...          .+               ..++..+.  . .|+++.++.............++...
T Consensus        95 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK  174 (262)
T PRK07831         95 LGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAK  174 (262)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHHH
Confidence             57899999998420          11               12233332  2 68888877654322222233344444


Q ss_pred             HHHHHHHHHHh-hhhcccccc
Q 021831          287 ATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       287 ~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      .+...+-+.+. .+..+||++
T Consensus       175 aal~~~~~~la~e~~~~gI~v  195 (262)
T PRK07831        175 AGVMALTRCSALEAAEYGVRI  195 (262)
T ss_pred             HHHHHHHHHHHHHhCccCeEE
Confidence            44554544444 345567765

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.42  E-value=0.0033  Score=52.16  Aligned_cols=134  Identities=13%  Similarity=0.175  Sum_probs=82.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCC---ceEEeCCChh----HHHHhc---CCccEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGA---EQAVDYSSKD----IELAIK---GKFDAVL  242 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~---~~v~~~~~~~----~~~~~~---~~~dvvi  242 (307)
                      -|.+|||.|+++++|+..++-..+.|-+||...|++. ++.++..-.   ..+.|..+.+    +.+.+.   ...++++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli   83 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI   83 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence            3789999999999999999999999999998876653 444444332   3455555544    444443   3679999


Q ss_pred             ECCCChh---------hH------------------HHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHHHHH
Q 021831          243 DTIGAPE---------TE------------------RLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTVLLK  293 (307)
Q Consensus       243 d~~g~~~---------~~------------------~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  293 (307)
                      |+.|-..         +.                  ...+..+  +|.+.+|.++..-...+...-..++...++...+.
T Consensus        84 NNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAaiHsyt  163 (245)
T COG3967          84 NNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYT  163 (245)
T ss_pred             ecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHHHHHHH
Confidence            9988421         11                  1222333  35799998886654334334444555555555555


Q ss_pred             HHHhhhhcc-ccccC
Q 021831          294 KRMQTWYSY-GIGCL  307 (307)
Q Consensus       294 ~~~~~~~~~-~i~~~  307 (307)
                      ..+...... +|+||
T Consensus       164 ~aLR~Qlk~t~veVI  178 (245)
T COG3967         164 LALREQLKDTSVEVI  178 (245)
T ss_pred             HHHHHHhhhcceEEE
Confidence            554432222 56554

>PRK07825 short chain dehydrogenase; Provisional

Probab=97.41  E-value=0.0062  Score=53.48  Aligned_cols=73  Identities=19%  Similarity=0.356  Sum_probs=48.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHcCCceE--EeCCChh-HH---HHhc---CCccEEEE
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGAEQA--VDYSSKD-IE---LAIK---GKFDAVLD  243 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~g~~~v--~~~~~~~-~~---~~~~---~~~dvvid  243 (307)
                      +.++||+||+|++|...++.+...|++|+...++.+. .. .+.++...+  .|.++.+ +.   +.+.   ++.|++|+
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN   84 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            6789999999999999999888889998888765432 22 333442222  3444432 22   1221   57899999


Q ss_pred             CCCC
Q 021831          244 TIGA  247 (307)
Q Consensus       244 ~~g~  247 (307)
                      +.|.
T Consensus        85 ~ag~   88 (273)
T PRK07825         85 NAGV   88 (273)
T ss_pred             CCCc
Confidence            9874

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.40  E-value=0.0052  Score=53.73  Aligned_cols=133  Identities=19%  Similarity=0.266  Sum_probs=77.6

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCceE--EeCCChh-HH---HHhc---CC
Q 021831          174 EGQRLLVLGG--GGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAEQA--VDYSSKD-IE---LAIK---GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga--~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~~v--~~~~~~~-~~---~~~~---~~  237 (307)
                      .+.++||.||  ++++|++.++.+...|++|+.+.+.++ .+.    ..+++....  .|..+.+ ..   +.+.   ++
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG   84 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence            4789999996  579999999888889999887643221 122    233343222  3444322 22   2221   67


Q ss_pred             ccEEEECCCChh---------------h---------------HHHHHhcccCCcEEEEeccCcccccccccceechhHH
Q 021831          238 FDAVLDTIGAPE---------------T---------------ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIA  287 (307)
Q Consensus       238 ~dvvid~~g~~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  287 (307)
                      +|++|++.|...               .               ...++..|+.+|+++.++.............++....
T Consensus        85 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~~~~Y~asKa  164 (260)
T PRK06997         85 LDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNYNTMGLAKA  164 (260)
T ss_pred             CcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCCcchHHHHHH
Confidence            999999986410               0               1244556667799999886554333222333445555


Q ss_pred             HHHHHHHHHh-hhhcccccc
Q 021831          288 TTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       288 ~~~~~~~~~~-~~~~~~i~~  306 (307)
                      +...+-+.+. .+..+||++
T Consensus       165 al~~l~~~la~el~~~gIrV  184 (260)
T PRK06997        165 SLEASVRYLAVSLGPKGIRA  184 (260)
T ss_pred             HHHHHHHHHHHHhcccCeEE
Confidence            5555555544 445667775

>PRK06483 dihydromonapterin reductase; Provisional

Probab=97.40  E-value=0.0058  Score=52.37  Aligned_cols=132  Identities=15%  Similarity=0.162  Sum_probs=76.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HHHHHcCCce-EEeCCCh-hH---HHHhc---CCccEEEEC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ-AVDYSSK-DI---ELAIK---GKFDAVLDT  244 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~~~~~g~~~-v~~~~~~-~~---~~~~~---~~~dvvid~  244 (307)
                      +.++||.|+++++|..+++.+...|++|+.+.++...  +.++..+... ..|..+. +.   .+.+.   +++|++|++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~   81 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN   81 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence            4689999999999999999988899999988765432  2334445321 1233332 22   22221   469999999


Q ss_pred             CCCh----------hhH---------------HHHHhcccC----CcEEEEeccCcccccccccceechhHHHHHHHHHH
Q 021831          245 IGAP----------ETE---------------RLGLNFLKR----GGHYMTLHGETAALADHYGLALGLPIATTVLLKKR  295 (307)
Q Consensus       245 ~g~~----------~~~---------------~~~~~~l~~----~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (307)
                      .|..          +.+               ..++..|+.    .|+++.++.............++........+-+.
T Consensus        82 ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~l~~~  161 (236)
T PRK06483         82 ASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTLS  161 (236)
T ss_pred             CccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHHHHHHHH
Confidence            8741          011               123344433    47888887654433333333455555555555555


Q ss_pred             Hhhhhcccccc
Q 021831          296 MQTWYSYGIGC  306 (307)
Q Consensus       296 ~~~~~~~~i~~  306 (307)
                      +.....++|++
T Consensus       162 ~a~e~~~~irv  172 (236)
T PRK06483        162 FAAKLAPEVKV  172 (236)
T ss_pred             HHHHHCCCcEE
Confidence            54444444553

>PRK07814 short chain dehydrogenase; Provisional

Probab=97.40  E-value=0.0054  Score=53.58  Aligned_cols=74  Identities=24%  Similarity=0.381  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-H---HHcCCc-eE--EeCCChhHHH-Hhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-V---LAAGAE-QA--VDYSSKDIEL-AIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~---~~~g~~-~v--~~~~~~~~~~-~~~------~~~  238 (307)
                      ++.++||.|++|.+|...++.+...|++|+.+.++.+. +. .   +..+.. ++  .|.++.+... .+.      +++
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   88 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL   88 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999888775432 21 1   222221 22  3444433221 111      579


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|++.|.
T Consensus        89 d~vi~~Ag~   97 (263)
T PRK07814         89 DIVVNNVGG   97 (263)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=97.40  E-value=0.0052  Score=53.53  Aligned_cols=130  Identities=23%  Similarity=0.257  Sum_probs=73.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCceEE--eCCCh-hHHHHhc------CCccEEE
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAEQAV--DYSSK-DIELAIK------GKFDAVL  242 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~~v~--~~~~~-~~~~~~~------~~~dvvi  242 (307)
                      ++||+|+++++|...++.+...|++|+.+.+++.. +.    +++.+..+.+  |..+. +..+.+.      +++|++|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            68999999999999999988899999888765432 11    2222322222  33332 2222221      5799999


Q ss_pred             ECCCChh------------h---------------HHHHHhc-c--cCCcEEEEeccCcccccccccceechhHHHHHHH
Q 021831          243 DTIGAPE------------T---------------ERLGLNF-L--KRGGHYMTLHGETAALADHYGLALGLPIATTVLL  292 (307)
Q Consensus       243 d~~g~~~------------~---------------~~~~~~~-l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  292 (307)
                      ++.|...            .               ...++.. +  +..|++|.++.............++....+...+
T Consensus        82 ~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~~  161 (259)
T PRK08340         82 WNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQL  161 (259)
T ss_pred             ECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHHH
Confidence            9987410            0               0112222 2  2468999988765432222222333344444444


Q ss_pred             HHHHh-hhhcccccc
Q 021831          293 KKRMQ-TWYSYGIGC  306 (307)
Q Consensus       293 ~~~~~-~~~~~~i~~  306 (307)
                      -+.+. .+..+||++
T Consensus       162 ~~~la~e~~~~gI~v  176 (259)
T PRK08340        162 AKGVSRTYGGKGIRA  176 (259)
T ss_pred             HHHHHHHhCCCCEEE
Confidence            44443 445567765

>PRK07806 short chain dehydrogenase; Provisional

Probab=97.38  E-value=0.0077  Score=51.93  Aligned_cols=97  Identities=21%  Similarity=0.392  Sum_probs=61.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--HHH----HHHcCCc-eE--EeCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDR----VLAAGAE-QA--VDYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--~~~----~~~~g~~-~v--~~~~~~~-~~~~~~------~~  237 (307)
                      .+.++||+|++|.+|...+..+...|.+|+.+.++..  .+.    ++..+.. ..  .|..+.+ ....+.      ++
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG   84 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            4679999999999999999988889999988766432  211    2222322 12  2444432 221111      46


Q ss_pred             ccEEEECCCCh-------------------hhHHHHHhcccCCcEEEEeccC
Q 021831          238 FDAVLDTIGAP-------------------ETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       238 ~dvvid~~g~~-------------------~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      +|++|.+.|..                   ..+..+...+..+|+++.++..
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~  136 (248)
T PRK07806         85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSH  136 (248)
T ss_pred             CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCc
Confidence            89999887642                   1234455555667899988763

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=97.37  E-value=0.005  Score=53.43  Aligned_cols=74  Identities=24%  Similarity=0.412  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eE--EeCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QA--VDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v--~~~~~~~-~~~~~~------~~~  238 (307)
                      .+.++||+|++|.+|..+++.+...|++|+.+.++... +.    ++..|.. ..  .|..+.. ..+.+.      +.+
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   88 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI   88 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            47899999999999999999988889999888765432 11    2222322 12  2444332 222111      578


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|.+.|.
T Consensus        89 d~li~~ag~   97 (255)
T PRK07523         89 DILVNNAGM   97 (255)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK06484 short chain dehydrogenase; Validated

Probab=97.36  E-value=0.0048  Score=59.57  Aligned_cols=133  Identities=22%  Similarity=0.335  Sum_probs=78.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HH-HHHHcCCc---eEEeCCChh-HHH---Hhc---CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-ID-RVLAAGAE---QAVDYSSKD-IEL---AIK---GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~-~~~~~g~~---~v~~~~~~~-~~~---~~~---~~~dvv  241 (307)
                      .+.++||+|+++++|.+.++.+...|++|+.+.++.. .. ..++++..   ...|.++.+ ..+   .+.   +++|++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL   83 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            5789999999999999999999999999998866533 22 23445432   223444432 222   221   579999


Q ss_pred             EECCCCh--h-------------------------hHHHHHhccc---CCcEEEEeccCcccccccccceechhHHHHHH
Q 021831          242 LDTIGAP--E-------------------------TERLGLNFLK---RGGHYMTLHGETAALADHYGLALGLPIATTVL  291 (307)
Q Consensus       242 id~~g~~--~-------------------------~~~~~~~~l~---~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  291 (307)
                      |++.|..  .                         ....++..|.   .+|+++.++.............++........
T Consensus        84 i~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal~~  163 (520)
T PRK06484         84 VNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVIS  163 (520)
T ss_pred             EECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHHHH
Confidence            9998741  0                         1233445552   23599998876553333333334444444444


Q ss_pred             HHHHHh-hhhcccccc
Q 021831          292 LKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       292 ~~~~~~-~~~~~~i~~  306 (307)
                      +-+.+. .+..++|++
T Consensus       164 l~~~la~e~~~~~i~v  179 (520)
T PRK06484        164 LTRSLACEWAAKGIRV  179 (520)
T ss_pred             HHHHHHHHhhhhCeEE
Confidence            444433 334556664

>PRK06500 short chain dehydrogenase; Provisional

Probab=97.35  E-value=0.0047  Score=53.24  Aligned_cols=74  Identities=23%  Similarity=0.359  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HHHHHcCCc-eE--EeCCChh-H---HHHhc---CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE-QA--VDYSSKD-I---ELAIK---GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~~~~~g~~-~v--~~~~~~~-~---~~~~~---~~~dvv  241 (307)
                      ++.+++|.||+|.+|...++.+...|++|+.+.++...  ...++++.. ..  .|..+.+ .   .+.+.   +++|++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            46799999999999999999999999999888765432  223444432 12  2333321 1   12221   578999


Q ss_pred             EECCCC
Q 021831          242 LDTIGA  247 (307)
Q Consensus       242 id~~g~  247 (307)
                      |++.|.
T Consensus        85 i~~ag~   90 (249)
T PRK06500         85 FINAGV   90 (249)
T ss_pred             EECCCC
Confidence            999874

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.33  E-value=0.0011  Score=52.14  Aligned_cols=94  Identities=19%  Similarity=0.250  Sum_probs=59.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCccH--HHHHHcCCc--eEEeCCChhHHHHhcCCccEEEECCCCh
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGAE--QAVDYSSKDIELAIKGKFDAVLDTIGAP  248 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~~--~~~~~~g~~--~v~~~~~~~~~~~~~~~~dvvid~~g~~  248 (307)
                      .+.+++|+|+ |+.|.+++..+..+|+ +++.+.|+.++  +.++.++..  .+..+.+  +.+.+ ..+|+||+|++..
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~--~~~~~-~~~DivI~aT~~~   86 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED--LEEAL-QEADIVINATPSG   86 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG--HCHHH-HTESEEEE-SSTT
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH--HHHHH-hhCCeEEEecCCC
Confidence            5899999996 9999999999999999 57777776543  334555332  2344432  22222 4599999999875


Q ss_pred             hhHHHHHhcccCC----cEEEEeccCcc
Q 021831          249 ETERLGLNFLKRG----GHYMTLHGETA  272 (307)
Q Consensus       249 ~~~~~~~~~l~~~----G~~v~~g~~~~  272 (307)
                      .. ...-..+...    +.++.++.|..
T Consensus        87 ~~-~i~~~~~~~~~~~~~~v~Dla~Pr~  113 (135)
T PF01488_consen   87 MP-IITEEMLKKASKKLRLVIDLAVPRD  113 (135)
T ss_dssp             ST-SSTHHHHTTTCHHCSEEEES-SS-S
T ss_pred             Cc-ccCHHHHHHHHhhhhceeccccCCC
Confidence            22 1111223333    68999998865

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK12939 short chain dehydrogenase; Provisional

Probab=97.33  E-value=0.0064  Score=52.35  Aligned_cols=74  Identities=24%  Similarity=0.345  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H-H---HHHcCCc-eE--EeCCChhH-HHHh---c---CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-R---VLAAGAE-QA--VDYSSKDI-ELAI---K---GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~-~---~~~~g~~-~v--~~~~~~~~-~~~~---~---~~~  238 (307)
                      .+.+++|+|++|.+|+..+..+...|++|+.+.+..+. . .   ++..+.. .+  .|..+.+. ...+   .   +++
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   85 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL   85 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999888665432 1 1   2222322 22  24443322 1111   1   579


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|.+.|.
T Consensus        86 d~vi~~ag~   94 (250)
T PRK12939         86 DGLVNNAGI   94 (250)
T ss_pred             CEEEECCCC
Confidence            999999885

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=97.31  E-value=0.0044  Score=53.95  Aligned_cols=133  Identities=16%  Similarity=0.208  Sum_probs=75.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHH----HHcCCc-eE--EeCCChh-H---HHHhc---CCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRV----LAAGAE-QA--VDYSSKD-I---ELAIK---GKFD  239 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~----~~~g~~-~v--~~~~~~~-~---~~~~~---~~~d  239 (307)
                      .+.++||.||++++|...++.+...|++|+.+.++++.+.+    .+.+.. ..  .|..+.+ .   .+.+.   +++|
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id   93 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKID   93 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999888766443222    223322 22  2333322 1   11111   5789


Q ss_pred             EEEECCCChh----------h---------------HHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHHH
Q 021831          240 AVLDTIGAPE----------T---------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLL  292 (307)
Q Consensus       240 vvid~~g~~~----------~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  292 (307)
                      ++|.+.|...          .               ...++..++  ..|+++.++.............++....+...+
T Consensus        94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  173 (258)
T PRK06935         94 ILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGL  173 (258)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHHHHHHH
Confidence            9999987410          1               122334443  258899888764432222222333333333333


Q ss_pred             HHH-Hhhhhcccccc
Q 021831          293 KKR-MQTWYSYGIGC  306 (307)
Q Consensus       293 ~~~-~~~~~~~~i~~  306 (307)
                      -+. ...+..+||++
T Consensus       174 ~~~la~e~~~~gi~v  188 (258)
T PRK06935        174 TKAFANELAAYNIQV  188 (258)
T ss_pred             HHHHHHHhhhhCeEE
Confidence            333 33445566664

>PRK07856 short chain dehydrogenase; Provisional

Probab=97.31  E-value=0.0041  Score=53.88  Aligned_cols=71  Identities=21%  Similarity=0.390  Sum_probs=47.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCC-c--eEEeCCCh-hHHHHhc------CCccEEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGA-E--QAVDYSSK-DIELAIK------GKFDAVLD  243 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~-~--~v~~~~~~-~~~~~~~------~~~dvvid  243 (307)
                      .+.++||+|++|++|...++.+...|++|+.+.+....   ...+. .  ...|..+. +..+.+.      +.+|++|.
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   81 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE---TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVN   81 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh---hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            47899999999999999999998899999888765432   11121 1  12233332 2222221      56899999


Q ss_pred             CCCC
Q 021831          244 TIGA  247 (307)
Q Consensus       244 ~~g~  247 (307)
                      +.|.
T Consensus        82 ~ag~   85 (252)
T PRK07856         82 NAGG   85 (252)
T ss_pred             CCCC
Confidence            9874

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=97.31  E-value=0.007  Score=52.18  Aligned_cols=133  Identities=19%  Similarity=0.250  Sum_probs=75.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH---HHHHHcCCc-eE--EeCCChh-HH---HHhc---CCccE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAGAE-QA--VDYSSKD-IE---LAIK---GKFDA  240 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~---~~~~~~g~~-~v--~~~~~~~-~~---~~~~---~~~dv  240 (307)
                      .|.++||+|++|.+|...++.+...|++|+.+.++...   +.+.+.+.. ..  .|.++.+ +.   +.+.   +++|+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   83 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47899999999999999999999999999988765422   223333422 22  2333322 22   2221   57999


Q ss_pred             EEECCCChh----------h---------------HHHHHhcc-cC--CcEEEEeccCcccccccccceechhHHHHHHH
Q 021831          241 VLDTIGAPE----------T---------------ERLGLNFL-KR--GGHYMTLHGETAALADHYGLALGLPIATTVLL  292 (307)
Q Consensus       241 vid~~g~~~----------~---------------~~~~~~~l-~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  292 (307)
                      +|++.|...          .               ...++..+ +.  .|+++.++.............+.....+...+
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~  163 (248)
T TIGR01832        84 LVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHGVAGL  163 (248)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHHHHHH
Confidence            999987410          1               12233333 22  47898888654322222222334444444444


Q ss_pred             HHHHh-hhhcccccc
Q 021831          293 KKRMQ-TWYSYGIGC  306 (307)
Q Consensus       293 ~~~~~-~~~~~~i~~  306 (307)
                      -..+. .+..+||++
T Consensus       164 ~~~la~e~~~~gi~v  178 (248)
T TIGR01832       164 TKLLANEWAAKGINV  178 (248)
T ss_pred             HHHHHHHhCccCcEE
Confidence            44433 334567764

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=97.30  E-value=0.0078  Score=52.19  Aligned_cols=74  Identities=19%  Similarity=0.362  Sum_probs=48.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eE--EeCCChh-HHH---Hhc---CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QA--VDYSSKD-IEL---AIK---GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v--~~~~~~~-~~~---~~~---~~~  238 (307)
                      .+.++||+||++++|..+++.+...|++|+.+.++.+. ..    ++..+.. ..  .|..+.+ +.+   .+.   +++
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   87 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI   87 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            47789999999999999999998899999988765432 11    2222322 12  2333322 221   111   578


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|.+.|.
T Consensus        88 d~vi~~ag~   96 (254)
T PRK08085         88 DVLINNAGI   96 (254)
T ss_pred             CEEEECCCc
Confidence            999999874

>PRK07578 short chain dehydrogenase; Provisional

Probab=97.30  E-value=0.0065  Score=50.65  Aligned_cols=120  Identities=23%  Similarity=0.273  Sum_probs=70.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChh-HHHHhc--CCccEEEECCCCh-----
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD-IELAIK--GKFDAVLDTIGAP-----  248 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~--~~~dvvid~~g~~-----  248 (307)
                      ++||.|+++++|...+..+... .+|+.+.++..         ....|..+.+ ..+.+.  +++|++|++.|..     
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~---------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~   71 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG---------DVQVDITDPASIRALFEKVGKVDAVVSAAGKVHFAPL   71 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC---------ceEecCCChHHHHHHHHhcCCCCEEEECCCCCCCCch
Confidence            6899999999999888877666 88888876542         1223444332 222222  5789999988741     


Q ss_pred             -----h---------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHHHHHHHHHHHhhhhcccccc
Q 021831          249 -----E---------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIGC  306 (307)
Q Consensus       249 -----~---------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  306 (307)
                           .               ....+...++++|.++.++.............++....+...+-+.+....++||++
T Consensus        72 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~gi~v  149 (199)
T PRK07578         72 AEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGGASAATVNGALEGFVKAAALELPRGIRI  149 (199)
T ss_pred             hhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHccCCeEE
Confidence                 0               123334456678999998865543333333334444444444444443322667764

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=97.29  E-value=0.0068  Score=52.89  Aligned_cols=73  Identities=32%  Similarity=0.426  Sum_probs=48.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHH-cCCc-eE--EeCCChh-HHHHhc------CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLA-AGAE-QA--VDYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~-~g~~-~v--~~~~~~~-~~~~~~------~~~dvv  241 (307)
                      .+.+++|.||+|++|..+++.+...|++|+.+.++.+ .+.+.+ .+.. ..  .|..+.+ ..+.+.      +.+|++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   83 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL   83 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4789999999999999999999999999998876543 222322 2321 11  2443322 222121      578999


Q ss_pred             EECCC
Q 021831          242 LDTIG  246 (307)
Q Consensus       242 id~~g  246 (307)
                      |++.|
T Consensus        84 i~~Ag   88 (262)
T TIGR03325        84 IPNAG   88 (262)
T ss_pred             EECCC
Confidence            99987

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=97.29  E-value=0.0099  Score=51.59  Aligned_cols=133  Identities=15%  Similarity=0.209  Sum_probs=75.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH---HHHHHcCCc-eE--EeCCCh-hHH---HHhc---CCccE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAGAE-QA--VDYSSK-DIE---LAIK---GKFDA  240 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~---~~~~~~g~~-~v--~~~~~~-~~~---~~~~---~~~dv  240 (307)
                      .|.++||.|+++++|.++++.+...|++|+.+.+.+..   +.+++.+.. ..  .|..+. +..   +.+.   +++|+
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~   88 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI   88 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            47899999999999999999999999999877544322   223333422 22  233332 222   2221   57899


Q ss_pred             EEECCCChh----------h---------------HHHHHhccc---CCcEEEEeccCcccccccccceechhHHHHHHH
Q 021831          241 VLDTIGAPE----------T---------------ERLGLNFLK---RGGHYMTLHGETAALADHYGLALGLPIATTVLL  292 (307)
Q Consensus       241 vid~~g~~~----------~---------------~~~~~~~l~---~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  292 (307)
                      +|++.|...          .               ...++..+.   ++|+++.++.............++....+...+
T Consensus        89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~  168 (253)
T PRK08993         89 LVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGV  168 (253)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHHHHHHH
Confidence            999987410          0               123334442   358899888765433222222344444444444


Q ss_pred             HHHHh-hhhcccccc
Q 021831          293 KKRMQ-TWYSYGIGC  306 (307)
Q Consensus       293 ~~~~~-~~~~~~i~~  306 (307)
                      -+.+. .+.++||++
T Consensus       169 ~~~la~e~~~~gi~v  183 (253)
T PRK08993        169 TRLMANEWAKHNINV  183 (253)
T ss_pred             HHHHHHHhhhhCeEE
Confidence            44433 445567764

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=97.28  E-value=0.0017  Score=57.27  Aligned_cols=99  Identities=20%  Similarity=0.327  Sum_probs=64.4

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCcc-HHHHHH----cCCceEEeCCChhHHHH-h-cCCcc
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKS-IDRVLA----AGAEQAVDYSSKDIELA-I-KGKFD  239 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~~~~~~-~~~~~~----~g~~~v~~~~~~~~~~~-~-~~~~d  239 (307)
                      ...+++|++||.+|. |. |..+.++++..|.  +|+++..++. .+.+++    .+...+ .....++.+. . .+.||
T Consensus        72 ~~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~d~~~l~~~~~~fD  148 (272)
T PRK11873         72 LAELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRLGEIEALPVADNSVD  148 (272)
T ss_pred             hccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEEcchhhCCCCCCcee
Confidence            457889999999994 55 8888888887775  6888865543 344433    343322 1111222221 1 14799


Q ss_pred             EEEECC------CChhhHHHHHhcccCCcEEEEeccC
Q 021831          240 AVLDTI------GAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       240 vvid~~------g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      +|+...      .....+..+.+.|+|||+++..+..
T Consensus       149 ~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~  185 (272)
T PRK11873        149 VIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVV  185 (272)
T ss_pred             EEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEee
Confidence            998653      2234788999999999999987643

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.28  E-value=0.0033  Score=51.66  Aligned_cols=92  Identities=23%  Similarity=0.307  Sum_probs=63.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCC--Ch-hHHHHhcCCccEEEECCCC----hhh
Q 021831          178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYS--SK-DIELAIKGKFDAVLDTIGA----PET  250 (307)
Q Consensus       178 VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~--~~-~~~~~~~~~~dvvid~~g~----~~~  250 (307)
                      |+|.||+|.+|..+++.+...|.+|++++|+...... ..+. +++..+  +. .+.+.+ .++|.||.+.|.    ...
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-~~~~-~~~~~d~~d~~~~~~al-~~~d~vi~~~~~~~~~~~~   77 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-SPGV-EIIQGDLFDPDSVKAAL-KGADAVIHAAGPPPKDVDA   77 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-CTTE-EEEESCTTCHHHHHHHH-TTSSEEEECCHSTTTHHHH
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-cccc-ccceeeehhhhhhhhhh-hhcchhhhhhhhhcccccc
Confidence            7899999999999999999999999999887653222 2333 343333  33 233433 579999999984    224


Q ss_pred             HHHHHhcccCCc--EEEEeccCcc
Q 021831          251 ERLGLNFLKRGG--HYMTLHGETA  272 (307)
Q Consensus       251 ~~~~~~~l~~~G--~~v~~g~~~~  272 (307)
                      ....++.++..|  +++.++....
T Consensus        78 ~~~~~~a~~~~~~~~~v~~s~~~~  101 (183)
T PF13460_consen   78 AKNIIEAAKKAGVKRVVYLSSAGV  101 (183)
T ss_dssp             HHHHHHHHHHTTSSEEEEEEETTG
T ss_pred             cccccccccccccccceeeecccc
Confidence            555566554443  8888776543

...

>PRK05717 oxidoreductase; Validated

Probab=97.27  E-value=0.011  Score=51.34  Aligned_cols=74  Identities=20%  Similarity=0.322  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-H-HHHHHcCCc-e--EEeCCChh-HH---HHhc---CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-I-DRVLAAGAE-Q--AVDYSSKD-IE---LAIK---GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~-~~~~~~g~~-~--v~~~~~~~-~~---~~~~---~~~dvv  241 (307)
                      .|.+++|+|++|.+|..++..+...|++|+.+.++.. . +..+.++.. .  ..|..+.+ ..   +.+.   +++|++
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   88 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL   88 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4789999999999999999999889999988865433 2 223344422 1  23333322 21   2221   568999


Q ss_pred             EECCCC
Q 021831          242 LDTIGA  247 (307)
Q Consensus       242 id~~g~  247 (307)
                      |.+.|.
T Consensus        89 i~~ag~   94 (255)
T PRK05717         89 VCNAAI   94 (255)
T ss_pred             EECCCc
Confidence            999874

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.27  E-value=0.0045  Score=55.05  Aligned_cols=94  Identities=22%  Similarity=0.275  Sum_probs=67.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhHH
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETER  252 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~~  252 (307)
                      .|++++|+|. |.+|..++..++.+|++|+...++.+ ...+.+.+...+ ..  .++.+.+ .++|+||++++....-.
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~-~~--~~l~~~l-~~aDiVint~P~~ii~~  224 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEMGLIPF-PL--NKLEEKV-AEIDIVINTIPALVLTA  224 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeee-cH--HHHHHHh-ccCCEEEECCChHHhCH
Confidence            4789999995 99999999999999999888876643 333445554322 11  2233332 56999999998662234


Q ss_pred             HHHhcccCCcEEEEeccCcc
Q 021831          253 LGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       253 ~~~~~l~~~G~~v~~g~~~~  272 (307)
                      ..+..++++..++.++..+.
T Consensus       225 ~~l~~~k~~aliIDlas~Pg  244 (287)
T TIGR02853       225 DVLSKLPKHAVIIDLASKPG  244 (287)
T ss_pred             HHHhcCCCCeEEEEeCcCCC
Confidence            56778899999999987543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=97.26  E-value=0.012  Score=51.25  Aligned_cols=131  Identities=18%  Similarity=0.264  Sum_probs=75.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHH----HHHcCCc---eEEeCCCh-hHHHHhc------CCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR----VLAAGAE---QAVDYSSK-DIELAIK------GKFD  239 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~----~~~~g~~---~v~~~~~~-~~~~~~~------~~~d  239 (307)
                      .+.++||.|++|.+|...++.+...|++|+.+.+.+....    +...+.+   ...|..+. +..+.+.      +++|
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   86 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence            3688999999999999999999889999988876543222    2223332   12344442 2222121      5799


Q ss_pred             EEEECCCChh--------------------------hHHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHH
Q 021831          240 AVLDTIGAPE--------------------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVL  291 (307)
Q Consensus       240 vvid~~g~~~--------------------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  291 (307)
                      ++|++.|...                          ....++..+.  ..|+++.++......  .....++....+...
T Consensus        87 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~Y~~sK~a~~~  164 (260)
T PRK12823         87 VLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG--INRVPYSAAKGGVNA  164 (260)
T ss_pred             EEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC--CCCCccHHHHHHHHH
Confidence            9999987310                          0123444453  347899988764321  112233444444444


Q ss_pred             HHHHHh-hhhcccccc
Q 021831          292 LKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       292 ~~~~~~-~~~~~~i~~  306 (307)
                      +-+.+. .+..++|++
T Consensus       165 ~~~~la~e~~~~gi~v  180 (260)
T PRK12823        165 LTASLAFEYAEHGIRV  180 (260)
T ss_pred             HHHHHHHHhcccCcEE
Confidence            444433 344557764

>PRK06523 short chain dehydrogenase; Provisional

Probab=97.25  E-value=0.0026  Score=55.35  Aligned_cols=71  Identities=31%  Similarity=0.448  Sum_probs=47.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCc-eEEeCCChhHH----HHhc---CCccEEEECC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE-QAVDYSSKDIE----LAIK---GKFDAVLDTI  245 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~-~v~~~~~~~~~----~~~~---~~~dvvid~~  245 (307)
                      +|.++||.|++|++|...++.+...|++|+.+.+......  ..... ...|..+.+..    +.+.   +++|++|++.
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~a   85 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDL--PEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVL   85 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc--CCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            4789999999999999999999889999998877643221  00111 12234433211    1121   5789999998


Q ss_pred             C
Q 021831          246 G  246 (307)
Q Consensus       246 g  246 (307)
                      |
T Consensus        86 g   86 (260)
T PRK06523         86 G   86 (260)
T ss_pred             c
Confidence            7

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=97.25  E-value=0.0035  Score=54.80  Aligned_cols=72  Identities=24%  Similarity=0.400  Sum_probs=46.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCc-eEEeCCChh-HHH---Hhc---CCccEEEECC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE-QAVDYSSKD-IEL---AIK---GKFDAVLDTI  245 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~-~v~~~~~~~-~~~---~~~---~~~dvvid~~  245 (307)
                      .+.++||.|++|++|.++++.+...|++|+.+.+......  ..... ...|..+.. ..+   .+.   +++|++|++.
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~A   85 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ--HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNA   85 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc--cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            4678999999999999999999999999988865432211  11111 123443332 222   111   5789999998


Q ss_pred             CC
Q 021831          246 GA  247 (307)
Q Consensus       246 g~  247 (307)
                      |.
T Consensus        86 g~   87 (266)
T PRK06171         86 GI   87 (266)
T ss_pred             cc
Confidence            73

>PRK07904 short chain dehydrogenase; Provisional

Probab=97.25  E-value=0.01  Score=51.68  Aligned_cols=135  Identities=19%  Similarity=0.192  Sum_probs=74.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCccH--HH----HHHcCC--ceE--EeCCChh-H---HHHhc-
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI--DR----VLAAGA--EQA--VDYSSKD-I---ELAIK-  235 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~~~~--~~----~~~~g~--~~v--~~~~~~~-~---~~~~~-  235 (307)
                      +..+.++||+||+|++|...++-+...| ++|+.+.++...  +.    +++.+.  .++  .|..+.+ .   .+.+. 
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~   84 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA   84 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence            3467899999999999999988776665 899888765432  21    233332  122  3333322 1   22221 


Q ss_pred             -CCccEEEECCCChhh-------------------------HHHHHhccc--CCcEEEEeccCcccccccccceechhHH
Q 021831          236 -GKFDAVLDTIGAPET-------------------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIA  287 (307)
Q Consensus       236 -~~~dvvid~~g~~~~-------------------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~  287 (307)
                       +++|++|++.|....                         ...++..+.  ..|+++.++.............++....
T Consensus        85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKa  164 (253)
T PRK07904         85 GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKA  164 (253)
T ss_pred             cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHH
Confidence             479999988765210                         012344554  3589999887654222222233344444


Q ss_pred             HHHHHHHHHh-hhhcccccc
Q 021831          288 TTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       288 ~~~~~~~~~~-~~~~~~i~~  306 (307)
                      +...+-..+. ....++|++
T Consensus       165 a~~~~~~~l~~el~~~~i~v  184 (253)
T PRK07904        165 GLDGFYLGLGEALREYGVRV  184 (253)
T ss_pred             HHHHHHHHHHHHHhhcCCEE
Confidence            4443333333 334456654

>PRK05866 short chain dehydrogenase; Provisional

Probab=97.24  E-value=0.0069  Score=54.03  Aligned_cols=74  Identities=27%  Similarity=0.483  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eE--EeCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QA--VDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v--~~~~~~~-~~~~~~------~~~  238 (307)
                      .+.+++|+||+|++|...++.+...|++|+.+.++.+. +.    +.+.+.. +.  .|..+.+ +.+.+.      +++
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  118 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV  118 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            35789999999999999999988899999998776432 21    2222322 22  2333322 222221      578


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|++.|.
T Consensus       119 d~li~~AG~  127 (293)
T PRK05866        119 DILINNAGR  127 (293)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK07326 short chain dehydrogenase; Provisional

Probab=97.23  E-value=0.011  Score=50.55  Aligned_cols=74  Identities=23%  Similarity=0.438  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H-HHHHcC---CceEE--eCCCh-hHHHHhc------CCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAG---AEQAV--DYSSK-DIELAIK------GKFD  239 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~-~~~~~g---~~~v~--~~~~~-~~~~~~~------~~~d  239 (307)
                      .+.+++|+||+|.+|..+++.+...|++|+++.+.... . ..+++.   ..+.+  |..+. ++.+.+.      +++|
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD   84 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            46889999999999999999888889999988765432 2 223332   12222  33332 2222221      4789


Q ss_pred             EEEECCCC
Q 021831          240 AVLDTIGA  247 (307)
Q Consensus       240 vvid~~g~  247 (307)
                      ++|++.|.
T Consensus        85 ~vi~~ag~   92 (237)
T PRK07326         85 VLIANAGV   92 (237)
T ss_pred             EEEECCCC
Confidence            99998764

>PRK05876 short chain dehydrogenase; Provisional

Probab=97.22  E-value=0.0083  Score=52.95  Aligned_cols=74  Identities=20%  Similarity=0.342  Sum_probs=48.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc-e--EEeCCChh-HHH---Hhc---CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE-Q--AVDYSSKD-IEL---AIK---GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~-~--v~~~~~~~-~~~---~~~---~~~  238 (307)
                      .|.++||+|++|++|...++.+...|++|+.+.++.. .+.    ++..+.. .  ..|..+.+ +.+   .+.   +.+
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV   84 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4788999999999999999999999999888765532 221    2223432 1  12333322 222   111   578


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|++.|.
T Consensus        85 d~li~nAg~   93 (275)
T PRK05876         85 DVVFSNAGI   93 (275)
T ss_pred             CEEEECCCc
Confidence            999999873

>PLN02253 xanthoxin dehydrogenase

Probab=97.21  E-value=0.013  Score=51.65  Aligned_cols=133  Identities=17%  Similarity=0.216  Sum_probs=74.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HHHHHcCC---ce--EEeCCChh-HHHHhc------CCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGA---EQ--AVDYSSKD-IELAIK------GKFD  239 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~~~~~g~---~~--v~~~~~~~-~~~~~~------~~~d  239 (307)
                      .+.++||.|++|.+|.+.++.+...|++|+.+.+.++.  +...+++.   ..  ..|..+.+ ..+.+.      +++|
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id   96 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD   96 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            36899999999999999999888899999888665432  12233321   11  23444432 222221      5799


Q ss_pred             EEEECCCChh---------------------------hHHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHH
Q 021831          240 AVLDTIGAPE---------------------------TERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       240 vvid~~g~~~---------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      ++|++.|...                           .+..++..+  +..|+++.++.............++....+..
T Consensus        97 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~  176 (280)
T PLN02253         97 IMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVL  176 (280)
T ss_pred             EEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHHHHHH
Confidence            9999987420                           001233333  24588888876544322222223444444444


Q ss_pred             HHHHHHh-hhhcccccc
Q 021831          291 LLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~-~~~~~~i~~  306 (307)
                      .+-+.+. .+..++|++
T Consensus       177 ~~~~~la~e~~~~gi~v  193 (280)
T PLN02253        177 GLTRSVAAELGKHGIRV  193 (280)
T ss_pred             HHHHHHHHHhhhcCeEE
Confidence            4444433 334456654

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.21  E-value=0.013  Score=50.40  Aligned_cols=74  Identities=19%  Similarity=0.399  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc---eEEeCCCh-hHHH---Hhc---CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE---QAVDYSSK-DIEL---AIK---GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~---~v~~~~~~-~~~~---~~~---~~~  238 (307)
                      ++.++||.|++|.+|+.+++.+...|++|+.+.++... ..    .+..+..   ...|..+. ...+   .+.   +++
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999998888765432 11    2233432   12333332 2222   111   468


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|++.|.
T Consensus        84 d~vi~~ag~   92 (253)
T PRK08217         84 NGLINNAGI   92 (253)
T ss_pred             CEEEECCCc
Confidence            999999873

>PRK07577 short chain dehydrogenase; Provisional

Probab=97.21  E-value=0.0074  Score=51.49  Aligned_cols=70  Identities=21%  Similarity=0.271  Sum_probs=47.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChh-HHHHhc-----CCccEEEECCCC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD-IELAIK-----GKFDAVLDTIGA  247 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~-----~~~dvvid~~g~  247 (307)
                      +.++||.|++|.+|...++.+...|.+|+.+.+......   .......|..+.. +.+.+.     .+.|++|.+.|.
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag~   78 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDF---PGELFACDLADIEQTAATLAQINEIHPVDAIVNNVGI   78 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccccc---CceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCCC
Confidence            578999999999999999999999999999877543311   0111223444432 222221     368999999874

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=97.20  E-value=0.011  Score=53.18  Aligned_cols=32  Identities=22%  Similarity=0.410  Sum_probs=29.1

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEE
Q 021831          174 EGQRLLVLGG--GGAVGFAAVQFSVASGCHVSAT  205 (307)
Q Consensus       174 ~g~~VlI~Ga--~g~~G~~~~~~a~~~G~~Vi~~  205 (307)
                      .|.++||+|+  ++++|.++++.+...|++|+..
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~~   41 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILVG   41 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEE
Confidence            5889999999  7999999999999999998873

>PRK09072 short chain dehydrogenase; Provisional

Probab=97.19  E-value=0.0075  Score=52.60  Aligned_cols=74  Identities=19%  Similarity=0.350  Sum_probs=47.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHH-HHc--C-CceEE--eCCChh-HH---HHhc--CCccE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRV-LAA--G-AEQAV--DYSSKD-IE---LAIK--GKFDA  240 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~-~~~--g-~~~v~--~~~~~~-~~---~~~~--~~~dv  240 (307)
                      ++.++||+||+|.+|...+..+...|++|+.+.++.+ .+.+ .++  + ..+.+  |..+.+ ..   +.+.  +.+|+
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~   83 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV   83 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence            4678999999999999999988889999998877643 2222 221  1 11222  333322 11   1111  57899


Q ss_pred             EEECCCC
Q 021831          241 VLDTIGA  247 (307)
Q Consensus       241 vid~~g~  247 (307)
                      +|.+.|.
T Consensus        84 lv~~ag~   90 (263)
T PRK09072         84 LINNAGV   90 (263)
T ss_pred             EEECCCC
Confidence            9999875

>PRK09242 tropinone reductase; Provisional

Probab=97.18  E-value=0.016  Score=50.25  Aligned_cols=74  Identities=16%  Similarity=0.252  Sum_probs=48.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HH---Hc--CCc-eE--EeCCChh-HH---HHhc---C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VL---AA--GAE-QA--VDYSSKD-IE---LAIK---G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~---~~--g~~-~v--~~~~~~~-~~---~~~~---~  236 (307)
                      .|.++||.|++|++|...++.+...|++|+.+.++.+. +. ..   ..  +.+ ..  .|..+.+ ..   +.+.   +
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   87 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD   87 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999888765432 11 11   22  221 11  2333322 21   2221   5


Q ss_pred             CccEEEECCCC
Q 021831          237 KFDAVLDTIGA  247 (307)
Q Consensus       237 ~~dvvid~~g~  247 (307)
                      ++|++|.+.|.
T Consensus        88 ~id~li~~ag~   98 (257)
T PRK09242         88 GLHILVNNAGG   98 (257)
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>PRK07677 short chain dehydrogenase; Provisional

Probab=97.18  E-value=0.011  Score=51.22  Aligned_cols=132  Identities=16%  Similarity=0.232  Sum_probs=75.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCC-ceEE--eCCChh-HHH---Hhc---CCcc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGA-EQAV--DYSSKD-IEL---AIK---GKFD  239 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~-~~v~--~~~~~~-~~~---~~~---~~~d  239 (307)
                      |.++||.|+++++|...++.+...|++|+.+.++.. ...    +++.+. ...+  |.++++ +.+   .+.   +++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            468999999999999999999999999988876543 221    222222 2223  333332 222   111   5789


Q ss_pred             EEEECCCChh-------------------------hHHHHHhcc-c--CCcEEEEeccCcccccccccceechhHHHHHH
Q 021831          240 AVLDTIGAPE-------------------------TERLGLNFL-K--RGGHYMTLHGETAALADHYGLALGLPIATTVL  291 (307)
Q Consensus       240 vvid~~g~~~-------------------------~~~~~~~~l-~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  291 (307)
                      ++|++.|...                         ....++..+ +  ..|+++.++.............++........
T Consensus        81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~  160 (252)
T PRK07677         81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLA  160 (252)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHHH
Confidence            9999987410                         012222222 2  25899998876543333333334555555555


Q ss_pred             HHHHHhhhh--cccccc
Q 021831          292 LKKRMQTWY--SYGIGC  306 (307)
Q Consensus       292 ~~~~~~~~~--~~~i~~  306 (307)
                      +-+.+...+  ++||++
T Consensus       161 ~~~~la~e~~~~~gi~v  177 (252)
T PRK07677        161 MTRTLAVEWGRKYGIRV  177 (252)
T ss_pred             HHHHHHHHhCcccCeEE
Confidence            555544332  357764

>PRK07478 short chain dehydrogenase; Provisional

Probab=97.17  E-value=0.011  Score=51.16  Aligned_cols=74  Identities=22%  Similarity=0.394  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc-eEE--eCCChh-H---HHHhc---CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE-QAV--DYSSKD-I---ELAIK---GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~-~v~--~~~~~~-~---~~~~~---~~~  238 (307)
                      .+.++||.|+++++|...++.+...|++|+.+.++.+ .+.    +++.+.+ ..+  |..+.+ .   .+.+.   +++
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL   84 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            4679999999999999999999899999998876543 221    2233322 122  333332 1   12111   579


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|++.|.
T Consensus        85 d~li~~ag~   93 (254)
T PRK07478         85 DIAFNNAGT   93 (254)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK05884 short chain dehydrogenase; Provisional

Probab=97.17  E-value=0.013  Score=49.86  Aligned_cols=126  Identities=17%  Similarity=0.192  Sum_probs=75.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHcCCce-EEeCCChh-HHHHhc---CCccEEEECCCC--
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAAGAEQ-AVDYSSKD-IELAIK---GKFDAVLDTIGA--  247 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~g~~~-v~~~~~~~-~~~~~~---~~~dvvid~~g~--  247 (307)
                      +++|.|+++++|...++.+...|++|+.+.+..+ .+. .++++... ..|..+.+ +.+...   +.+|++|++.|.  
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~~   81 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPSW   81 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCccc
Confidence            5899999999999999999889999988866543 222 23344322 23444432 222222   368999998652  


Q ss_pred             ----h---------hhH---------------HHHHhcccCCcEEEEeccCcccccccccceechhHHHHHHHHHHHh-h
Q 021831          248 ----P---------ETE---------------RLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ-T  298 (307)
Q Consensus       248 ----~---------~~~---------------~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  298 (307)
                          .         +.+               ..++..|+.+|++|.++....    .....++....+...+-+.+. .
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~----~~~~~Y~asKaal~~~~~~la~e  157 (223)
T PRK05884         82 DAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP----PAGSAEAAIKAALSNWTAGQAAV  157 (223)
T ss_pred             cCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC----CCccccHHHHHHHHHHHHHHHHH
Confidence                0         011               233344567799999886542    122344555555555555544 4


Q ss_pred             hhcccccc
Q 021831          299 WYSYGIGC  306 (307)
Q Consensus       299 ~~~~~i~~  306 (307)
                      +..+||++
T Consensus       158 ~~~~gI~v  165 (223)
T PRK05884        158 FGTRGITI  165 (223)
T ss_pred             hhhcCeEE
Confidence            45667765

>PRK12747 short chain dehydrogenase; Provisional

Probab=97.16  E-value=0.014  Score=50.49  Aligned_cols=133  Identities=15%  Similarity=0.235  Sum_probs=76.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CC-ccHHH----HHHcCCc-eE--EeCCCh-h---HHHHhc-----
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC-GS-KSIDR----VLAAGAE-QA--VDYSSK-D---IELAIK-----  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~-~~-~~~~~----~~~~g~~-~v--~~~~~~-~---~~~~~~-----  235 (307)
                      .+.++||+|+++++|.++++.+...|++|+... +. ++.+.    +...+.. ..  .|..+. +   +.+.+.     
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            468999999999999999999999999987763 32 22211    2222322 11  222221 1   111111     


Q ss_pred             --C--CccEEEECCCChh----------h---------------HHHHHhcccCCcEEEEeccCcccccccccceechhH
Q 021831          236 --G--KFDAVLDTIGAPE----------T---------------ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPI  286 (307)
Q Consensus       236 --~--~~dvvid~~g~~~----------~---------------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  286 (307)
                        +  ++|++|++.|...          .               ...++..++..|++|.++.............++...
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  162 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTK  162 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCCchhHHHHH
Confidence              2  6899999987310          0               123555666779999999776543333333344444


Q ss_pred             HHHHHHHHHH-hhhhcccccc
Q 021831          287 ATTVLLKKRM-QTWYSYGIGC  306 (307)
Q Consensus       287 ~~~~~~~~~~-~~~~~~~i~~  306 (307)
                      .+...+-+.+ ..+..+||++
T Consensus       163 aa~~~~~~~la~e~~~~girv  183 (252)
T PRK12747        163 GAINTMTFTLAKQLGARGITV  183 (252)
T ss_pred             HHHHHHHHHHHHHHhHcCCEE
Confidence            4444444443 3445667765

>PRK07791 short chain dehydrogenase; Provisional

Probab=97.16  E-value=0.0091  Score=53.02  Aligned_cols=133  Identities=20%  Similarity=0.215  Sum_probs=75.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc----------cHHH----HHHcCCc-eE--EeCCChh-H---HH
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK----------SIDR----VLAAGAE-QA--VDYSSKD-I---EL  232 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~----------~~~~----~~~~g~~-~v--~~~~~~~-~---~~  232 (307)
                      .+.++||.|+++++|.+.++.+...|++|+.+.+..          +.+.    +++.+.. ..  .|..+.+ .   .+
T Consensus         5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~   84 (286)
T PRK07791          5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVD   84 (286)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence            578999999999999999998888999888775432          1111    2222322 12  2333322 2   22


Q ss_pred             Hhc---CCccEEEECCCChh----------h---------------HHHHHhcccC--------CcEEEEeccCcccccc
Q 021831          233 AIK---GKFDAVLDTIGAPE----------T---------------ERLGLNFLKR--------GGHYMTLHGETAALAD  276 (307)
Q Consensus       233 ~~~---~~~dvvid~~g~~~----------~---------------~~~~~~~l~~--------~G~~v~~g~~~~~~~~  276 (307)
                      .+.   +.+|++|++.|...          .               ...++..|..        .|++|.++........
T Consensus        85 ~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~  164 (286)
T PRK07791         85 AAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGS  164 (286)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCC
Confidence            221   67899999987420          0               1222233321        3789988875543333


Q ss_pred             cccceechhHHHHHHHHHHHh-hhhcccccc
Q 021831          277 HYGLALGLPIATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      .....++....+...+-+.+. .+..+||++
T Consensus       165 ~~~~~Y~asKaal~~l~~~la~el~~~gIrV  195 (286)
T PRK07791        165 VGQGNYSAAKAGIAALTLVAAAELGRYGVTV  195 (286)
T ss_pred             CCchhhHHHHHHHHHHHHHHHHHHHHhCeEE
Confidence            333344445555555544443 445567764

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.16  E-value=0.016  Score=50.35  Aligned_cols=74  Identities=19%  Similarity=0.317  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HH---HHHcCCce-E--EeCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ-A--VDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~---~~~~g~~~-v--~~~~~~~-~~~~~~------~~~  238 (307)
                      .+.++||+|++|.+|..+++.+...|++|+.+.++.+.  +.   ++..+... .  .|.++.+ +.+.+.      +++
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   85 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV   85 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999888765431  11   23334331 1  2333332 222111      468


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|.+.|.
T Consensus        86 d~vi~~ag~   94 (262)
T PRK13394         86 DILVSNAGI   94 (262)
T ss_pred             CEEEECCcc
Confidence            999999874

>PRK06701 short chain dehydrogenase; Provisional

Probab=97.15  E-value=0.014  Score=52.04  Aligned_cols=99  Identities=19%  Similarity=0.301  Sum_probs=61.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--HHH----HHHcCCce-E--EeCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDR----VLAAGAEQ-A--VDYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--~~~----~~~~g~~~-v--~~~~~~~-~~~~~~------~~  237 (307)
                      .+.++||.||+|.+|..++..+...|++|+.+.+...  .+.    ++..+... +  .|..+.+ ..+.+.      ++
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~  124 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGR  124 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999988889999988865432  111    22223221 2  2333322 212111      57


Q ss_pred             ccEEEECCCChh--------------------------hHHHHHhcccCCcEEEEeccCcc
Q 021831          238 FDAVLDTIGAPE--------------------------TERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       238 ~dvvid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      +|++|.+.|...                          ....+...++++|++|.++....
T Consensus       125 iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~  185 (290)
T PRK06701        125 LDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITG  185 (290)
T ss_pred             CCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence            899999887410                          01233445567789999887544

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.15  E-value=0.016  Score=49.94  Aligned_cols=98  Identities=19%  Similarity=0.299  Sum_probs=61.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--HH----HHHHcCCc-eE--EeCCChh-HHHHhc------CCc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--ID----RVLAAGAE-QA--VDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--~~----~~~~~g~~-~v--~~~~~~~-~~~~~~------~~~  238 (307)
                      +.++||.||+|.+|...++.+...|++++...+...  ..    .+++.+.. ..  .|.++.+ ....+.      +++
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   85 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVA   85 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence            679999999999999999888889998877654322  11    12333322 12  2333322 111111      578


Q ss_pred             cEEEECCCCh----------h---------------hHHHHHhcccCCcEEEEeccCcc
Q 021831          239 DAVLDTIGAP----------E---------------TERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       239 dvvid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      |++|.+.|..          .               ....+++.++..|+++.++....
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~  144 (252)
T PRK06077         86 DILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG  144 (252)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence            9999999831          0               12345556677899999987654

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=97.14  E-value=0.014  Score=50.39  Aligned_cols=70  Identities=19%  Similarity=0.318  Sum_probs=47.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCc-eE--EeCCCh-hHHHHhc------CCccEEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE-QA--VDYSSK-DIELAIK------GKFDAVLD  243 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~-~v--~~~~~~-~~~~~~~------~~~dvvid  243 (307)
                      .+.++||.|++|.+|...++.+...|++|+.+.+..    ....+.. ..  .|..+. .+.+.+.      +.+|++|.
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVN   82 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch----hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            468899999999999999999888999999887654    1222211 11  233332 2222221      46899999


Q ss_pred             CCCC
Q 021831          244 TIGA  247 (307)
Q Consensus       244 ~~g~  247 (307)
                      +.|.
T Consensus        83 ~ag~   86 (252)
T PRK08220         83 AAGI   86 (252)
T ss_pred             CCCc
Confidence            9875

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=97.14  E-value=0.018  Score=50.20  Aligned_cols=133  Identities=17%  Similarity=0.170  Sum_probs=74.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--HHH-H---H-HcCCc-eE--EeCCChh-H---HHHhc---C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDR-V---L-AAGAE-QA--VDYSSKD-I---ELAIK---G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--~~~-~---~-~~g~~-~v--~~~~~~~-~---~~~~~---~  236 (307)
                      .+.++||.||++++|.+++..+...|++|+.+.+...  .+. .   + ..+.. ..  .|.++.+ .   .+.+.   +
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   86 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999999899999887754322  111 1   1 12321 22  2444332 2   12221   5


Q ss_pred             CccEEEECCCCh----------------hh---------------HHHHHhccc--CCcEEEEeccCcccccccccceec
Q 021831          237 KFDAVLDTIGAP----------------ET---------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALG  283 (307)
Q Consensus       237 ~~dvvid~~g~~----------------~~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~  283 (307)
                      .+|++|++.|..                ..               ...++..+.  ..|+++.++.............++
T Consensus        87 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  166 (260)
T PRK08416         87 RVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHG  166 (260)
T ss_pred             CccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCcccch
Confidence            789999988521                00               112333343  358999988764422222222334


Q ss_pred             hhHHHHHHHHHHHh-hhhcccccc
Q 021831          284 LPIATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       284 ~~~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ....+...+-+.+. .+..+||++
T Consensus       167 asK~a~~~~~~~la~el~~~gi~v  190 (260)
T PRK08416        167 TSKAAVETMVKYAATELGEKNIRV  190 (260)
T ss_pred             hhHHHHHHHHHHHHHHhhhhCeEE
Confidence            44444444444433 445567765

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.13  E-value=0.015  Score=50.92  Aligned_cols=133  Identities=18%  Similarity=0.207  Sum_probs=74.7

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHH----HcCCceE--EeCCChh-H---HHHhc---CC
Q 021831          174 EGQRLLVLGG--GGAVGFAAVQFSVASGCHVSATCGSKS-IDRVL----AAGAEQA--VDYSSKD-I---ELAIK---GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga--~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~----~~g~~~v--~~~~~~~-~---~~~~~---~~  237 (307)
                      .|.++||.||  ++++|.+.++.+...|++|+...+.++ .+.++    +.+....  .|..+.+ .   .+.+.   ++
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG   84 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4789999996  579999999998889999887754332 22222    2232222  2333322 2   22221   57


Q ss_pred             ccEEEECCCChh---------------hH---------------HHHHhcc-cCCcEEEEeccCcccccccccceechhH
Q 021831          238 FDAVLDTIGAPE---------------TE---------------RLGLNFL-KRGGHYMTLHGETAALADHYGLALGLPI  286 (307)
Q Consensus       238 ~dvvid~~g~~~---------------~~---------------~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~  286 (307)
                      +|++|++.|...               .+               ..++..+ +.+|+++.++.............++...
T Consensus        85 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~~~~Y~asK  164 (261)
T PRK08690         85 LDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVMGMAK  164 (261)
T ss_pred             CcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCCcccchhHH
Confidence            999999987420               01               1122233 2348888887665433222333344455


Q ss_pred             HHHHHHHHHHh-hhhcccccc
Q 021831          287 ATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       287 ~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      .+...+-+.+. .+..+||++
T Consensus       165 aal~~l~~~la~e~~~~gIrV  185 (261)
T PRK08690        165 ASLEAGIRFTAACLGKEGIRC  185 (261)
T ss_pred             HHHHHHHHHHHHHhhhcCeEE
Confidence            55544444443 456677775

>PRK06114 short chain dehydrogenase; Provisional

Probab=97.13  E-value=0.015  Score=50.41  Aligned_cols=74  Identities=22%  Similarity=0.304  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--HH-H---HHHcCCc-eE--EeCCChh-HHH---Hhc---CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--ID-R---VLAAGAE-QA--VDYSSKD-IEL---AIK---GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--~~-~---~~~~g~~-~v--~~~~~~~-~~~---~~~---~~  237 (307)
                      .+.++||.|+++++|..+++.+...|++|+.+.++..  .+ .   ++..+.. ..  .|..+.+ ..+   .+.   +.
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   86 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA   86 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4779999999999999999999999999988866432  11 1   2233322 12  2333322 222   111   57


Q ss_pred             ccEEEECCCC
Q 021831          238 FDAVLDTIGA  247 (307)
Q Consensus       238 ~dvvid~~g~  247 (307)
                      +|++|++.|.
T Consensus        87 id~li~~ag~   96 (254)
T PRK06114         87 LTLAVNAAGI   96 (254)
T ss_pred             CCEEEECCCC
Confidence            8999999884

>PRK12743 oxidoreductase; Provisional

Probab=97.13  E-value=0.013  Score=50.97  Aligned_cols=73  Identities=21%  Similarity=0.284  Sum_probs=47.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-cc-HH----HHHHcCCc-eE--EeCCChh-H---HHHhc---CCc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KS-ID----RVLAAGAE-QA--VDYSSKD-I---ELAIK---GKF  238 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~-~~----~~~~~g~~-~v--~~~~~~~-~---~~~~~---~~~  238 (307)
                      +.++||.||++.+|+.+++.+...|++|+.+.+. .+ .+    .++..+.. +.  .|.++.. .   .+.+.   +++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999877443 22 11    12334432 22  3344322 1   22221   578


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|.+.|.
T Consensus        82 d~li~~ag~   90 (256)
T PRK12743         82 DVLVNNAGA   90 (256)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=97.13  E-value=0.013  Score=51.52  Aligned_cols=73  Identities=30%  Similarity=0.457  Sum_probs=47.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-H---HHcCCc-eE--EeCCChh-HHH---Hhc---CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-V---LAAGAE-QA--VDYSSKD-IEL---AIK---GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~---~~~g~~-~v--~~~~~~~-~~~---~~~---~~~  238 (307)
                      .+.+++|.|++|++|+..++.+...|++|+.+.++.+ .+. .   +..+.. ..  .|..+.+ ...   .+.   +++
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC   88 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999899999988876543 211 2   222322 12  2333322 221   111   579


Q ss_pred             cEEEECCC
Q 021831          239 DAVLDTIG  246 (307)
Q Consensus       239 dvvid~~g  246 (307)
                      |++|++.|
T Consensus        89 d~li~~ag   96 (278)
T PRK08277         89 DILINGAG   96 (278)
T ss_pred             CEEEECCC
Confidence            99999987

>PRK08267 short chain dehydrogenase; Provisional

Probab=97.12  E-value=0.012  Score=51.17  Aligned_cols=72  Identities=19%  Similarity=0.379  Sum_probs=47.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHH-HHcC-C-c--eEEeCCChh-HHHH---h----cCCccEE
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRV-LAAG-A-E--QAVDYSSKD-IELA---I----KGKFDAV  241 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~-~~~g-~-~--~v~~~~~~~-~~~~---~----~~~~dvv  241 (307)
                      .++||+||+|.+|...++.+...|++|+.+.++.+ .+.+ ...+ . .  ...|..+.+ ..+.   +    .+++|++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            47999999999999999988889999998876543 2222 2222 1 1  223444432 2221   1    2468999


Q ss_pred             EECCCC
Q 021831          242 LDTIGA  247 (307)
Q Consensus       242 id~~g~  247 (307)
                      |.+.|.
T Consensus        82 i~~ag~   87 (260)
T PRK08267         82 FNNAGI   87 (260)
T ss_pred             EECCCC
Confidence            999885

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=97.12  E-value=0.012  Score=50.78  Aligned_cols=71  Identities=20%  Similarity=0.297  Sum_probs=46.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHH-HHcCCc-eE--EeCCCh-hHHH---Hhc---CCccEEEEC
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRV-LAAGAE-QA--VDYSSK-DIEL---AIK---GKFDAVLDT  244 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~-~~~g~~-~v--~~~~~~-~~~~---~~~---~~~dvvid~  244 (307)
                      +++|.|++|.+|...++.+...|++|+.+.++.. ...+ ..++.. ..  .|..+. +..+   .+.   +++|++|.+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~   81 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN   81 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            6899999999999999999999999998877543 2222 223322 12  233332 2222   111   479999998


Q ss_pred             CCC
Q 021831          245 IGA  247 (307)
Q Consensus       245 ~g~  247 (307)
                      .|.
T Consensus        82 ag~   84 (248)
T PRK10538         82 AGL   84 (248)
T ss_pred             CCc
Confidence            874

>PRK07060 short chain dehydrogenase; Provisional

Probab=97.12  E-value=0.012  Score=50.43  Aligned_cols=74  Identities=27%  Similarity=0.467  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHcCCce-EEeCCChh-HHHHhc--CCccEEEECCCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAAGAEQ-AVDYSSKD-IELAIK--GKFDAVLDTIGA  247 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~g~~~-v~~~~~~~-~~~~~~--~~~dvvid~~g~  247 (307)
                      .+.+++|+|++|.+|..+++.+...|++|+.+.++.+ ... .+..+... ..|.++.+ ..+...  +++|++|++.|.
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~   87 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGI   87 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence            4689999999999999999999999999988877543 222 23334332 23444433 222222  468999999874

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.11  E-value=0.0014  Score=62.21  Aligned_cols=125  Identities=18%  Similarity=0.087  Sum_probs=74.0

Q ss_pred             HcCCCCCCEEE----EEcCCchHHHHHHHHHHHcCCEEEEEeCCccHH-HHHHcCCc-eEEeCCChhHHHHhcCCccEEE
Q 021831          169 AARMSEGQRLL----VLGGGGAVGFAAVQFSVASGCHVSATCGSKSID-RVLAAGAE-QAVDYSSKDIELAIKGKFDAVL  242 (307)
Q Consensus       169 ~~~~~~g~~Vl----I~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~-~~~~~g~~-~v~~~~~~~~~~~~~~~~dvvi  242 (307)
                      ..++++|+.+|    |+||+|++|.+++++++..|++|+++.+..... ..+..+.+ .+++.+...+.+.+..      
T Consensus        28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~------  101 (450)
T PRK08261         28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWGDRFGALVFDATGITDPADLKA------  101 (450)
T ss_pred             ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCcCCcccEEEEECCCCCCHHHHHH------
Confidence            45678999998    999899999999999999999999886543311 11222222 3444443222222210      


Q ss_pred             ECCCChhhHHHHHhcccCCcEEEEeccCcccccccccceechhHHHHHHHHHHHhhhhcccccc
Q 021831          243 DTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIGC  306 (307)
Q Consensus       243 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  306 (307)
                          ........++.|.++|+++.++.......   ............-+.+.+.....++|++
T Consensus       102 ----~~~~~~~~l~~l~~~griv~i~s~~~~~~---~~~~~~akaal~gl~rsla~E~~~gi~v  158 (450)
T PRK08261        102 ----LYEFFHPVLRSLAPCGRVVVLGRPPEAAA---DPAAAAAQRALEGFTRSLGKELRRGATA  158 (450)
T ss_pred             ----HHHHHHHHHHhccCCCEEEEEccccccCC---chHHHHHHHHHHHHHHHHHHHhhcCCEE
Confidence                01245667888899999999998654211   1112333334444444444333556654

>PRK08628 short chain dehydrogenase; Provisional

Probab=97.10  E-value=0.013  Score=50.85  Aligned_cols=74  Identities=19%  Similarity=0.260  Sum_probs=48.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH---HHHcCCc-eE--EeCCChh-HHHHhc------CCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR---VLAAGAE-QA--VDYSSKD-IELAIK------GKFD  239 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~---~~~~g~~-~v--~~~~~~~-~~~~~~------~~~d  239 (307)
                      .|.++||+||+|.+|..+++.+...|++|+.+.++... ..   +++.+.. +.  .|..+.. ....+.      +++|
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   85 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID   85 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            46799999999999999999888899988888665432 22   2223322 12  2333322 222121      5789


Q ss_pred             EEEECCCC
Q 021831          240 AVLDTIGA  247 (307)
Q Consensus       240 vvid~~g~  247 (307)
                      ++|.+.|.
T Consensus        86 ~vi~~ag~   93 (258)
T PRK08628         86 GLVNNAGV   93 (258)
T ss_pred             EEEECCcc
Confidence            99999983

>PRK06180 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.014  Score=51.40  Aligned_cols=74  Identities=23%  Similarity=0.289  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHc-CC-ce--EEeCCChh-HHHHhc------CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAA-GA-EQ--AVDYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~-g~-~~--v~~~~~~~-~~~~~~------~~~dvv  241 (307)
                      .+.++||+|++|.+|...++.+...|++|+++.++.. ...+.+. +. ..  ..|..+.+ ..+.+.      +++|++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            3578999999999999999998889999999877543 2233322 21 11  22444332 222221      468999


Q ss_pred             EECCCC
Q 021831          242 LDTIGA  247 (307)
Q Consensus       242 id~~g~  247 (307)
                      |++.|.
T Consensus        83 v~~ag~   88 (277)
T PRK06180         83 VNNAGY   88 (277)
T ss_pred             EECCCc
Confidence            999885

>PRK06841 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.015  Score=50.41  Aligned_cols=74  Identities=23%  Similarity=0.388  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHH-HHHcCCc----eEEeCCChh-HHH---Hhc---CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR-VLAAGAE----QAVDYSSKD-IEL---AIK---GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~-~~~~g~~----~v~~~~~~~-~~~---~~~---~~~dvv  241 (307)
                      .+.++||.||+|.+|..+++.+...|++|+.+.++.+... ..+....    ...|..+.. +..   .+.   +++|++
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~v   93 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDIL   93 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4789999999999999999999889999998877654322 2222111    123333322 211   111   478999


Q ss_pred             EECCCC
Q 021831          242 LDTIGA  247 (307)
Q Consensus       242 id~~g~  247 (307)
                      |.+.|.
T Consensus        94 i~~ag~   99 (255)
T PRK06841         94 VNSAGV   99 (255)
T ss_pred             EECCCC
Confidence            999874

>PRK12828 short chain dehydrogenase; Provisional

Probab=97.08  E-value=0.02  Score=48.79  Aligned_cols=74  Identities=23%  Similarity=0.375  Sum_probs=48.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HH---HHHcCCce-EEeCCCh-hHH---HHhc---CCccE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ-AVDYSSK-DIE---LAIK---GKFDA  240 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~---~~~~g~~~-v~~~~~~-~~~---~~~~---~~~dv  240 (307)
                      ++.++||+|++|.+|..+++.+...|++|+.+.++...  +.   +...+... ..|..+. ++.   +.+.   +++|+
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            37899999999999999999988889999988775432  21   22223221 1333332 222   1111   57899


Q ss_pred             EEECCCC
Q 021831          241 VLDTIGA  247 (307)
Q Consensus       241 vid~~g~  247 (307)
                      +|++.|.
T Consensus        86 vi~~ag~   92 (239)
T PRK12828         86 LVNIAGA   92 (239)
T ss_pred             EEECCcc
Confidence            9998874

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=97.08  E-value=0.016  Score=49.93  Aligned_cols=74  Identities=26%  Similarity=0.365  Sum_probs=47.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc---HHH---HHHcCCceE---EeCCCh-hHHHHh---c---CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS---IDR---VLAAGAEQA---VDYSSK-DIELAI---K---GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~---~~~---~~~~g~~~v---~~~~~~-~~~~~~---~---~~  237 (307)
                      .+.++||+|++|.+|..+++.+...|++|+...+...   .+.   ++..+....   .|..+. +..+.+   .   ++
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            3678999999999999999999999998877643221   111   223343322   233332 222211   1   57


Q ss_pred             ccEEEECCCC
Q 021831          238 FDAVLDTIGA  247 (307)
Q Consensus       238 ~dvvid~~g~  247 (307)
                      .|++|++.|.
T Consensus        82 id~li~~ag~   91 (246)
T PRK12938         82 IDVLVNNAGI   91 (246)
T ss_pred             CCEEEECCCC
Confidence            9999999885

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.07  E-value=0.0085  Score=50.09  Aligned_cols=133  Identities=16%  Similarity=0.265  Sum_probs=78.5

Q ss_pred             CCEEEEEcC-CchHHHHHHHHHHHcCCEEEEEeCCcc-HHHH-HHcCC-ceEEeCCChhHH----HHhc----CCccEEE
Q 021831          175 GQRLLVLGG-GGAVGFAAVQFSVASGCHVSATCGSKS-IDRV-LAAGA-EQAVDYSSKDIE----LAIK----GKFDAVL  242 (307)
Q Consensus       175 g~~VlI~Ga-~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~-~~~g~-~~v~~~~~~~~~----~~~~----~~~dvvi  242 (307)
                      ...|||.|. .|++|.+.+.-..+.|++|+++.+..+ ...+ ..+|. ..-+|.+.++-.    ..+.    |+.|+.+
T Consensus         7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~   86 (289)
T KOG1209|consen    7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLY   86 (289)
T ss_pred             CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEEE
Confidence            457888876 599999988888889999999987654 3333 35663 233455443322    1221    6889999


Q ss_pred             ECCCChh----------hH--------------HH--HHhcccCCcEEEEeccCcccccccccceechhHHHHHHHHHHH
Q 021831          243 DTIGAPE----------TE--------------RL--GLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM  296 (307)
Q Consensus       243 d~~g~~~----------~~--------------~~--~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (307)
                      |..|-+=          .+              ..  ...+++..|++|.+|......+..-+..+....+++......+
T Consensus        87 NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAAihay~~tL  166 (289)
T KOG1209|consen   87 NNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAAIHAYARTL  166 (289)
T ss_pred             cCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhhhhHHHHHHHHhhhhc
Confidence            9888420          11              11  1234577899999998655433333333333333333333333


Q ss_pred             h-hhhccccccC
Q 021831          297 Q-TWYSYGIGCL  307 (307)
Q Consensus       297 ~-~~~~~~i~~~  307 (307)
                      - ...+.||++|
T Consensus       167 rlEl~PFgv~Vi  178 (289)
T KOG1209|consen  167 RLELKPFGVRVI  178 (289)
T ss_pred             EEeeeccccEEE
Confidence            2 3445576654

>PRK08643 acetoin reductase; Validated

Probab=97.07  E-value=0.021  Score=49.42  Aligned_cols=73  Identities=25%  Similarity=0.400  Sum_probs=47.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eE--EeCCChh-HHH---Hhc---CCcc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QA--VDYSSKD-IEL---AIK---GKFD  239 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v--~~~~~~~-~~~---~~~---~~~d  239 (307)
                      +.++||+|++|.+|...++.+...|++|+.+.++... +.    +...+.. ..  .|..+.+ ..+   .+.   +++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5689999999999999999999999999888765432 12    2222322 12  2333332 212   111   5789


Q ss_pred             EEEECCCC
Q 021831          240 AVLDTIGA  247 (307)
Q Consensus       240 vvid~~g~  247 (307)
                      ++|.+.|.
T Consensus        82 ~vi~~ag~   89 (256)
T PRK08643         82 VVVNNAGV   89 (256)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK08263 short chain dehydrogenase; Provisional

Probab=97.06  E-value=0.011  Score=51.89  Aligned_cols=132  Identities=17%  Similarity=0.206  Sum_probs=73.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HHH-HHcCC-ceE--EeCCCh-hHHHHhc------CCccEEE
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV-LAAGA-EQA--VDYSSK-DIELAIK------GKFDAVL  242 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~-~~~g~-~~v--~~~~~~-~~~~~~~------~~~dvvi  242 (307)
                      +.++||.||+|.+|..+++.+...|.+|+.+.++.+. ..+ ..++. ...  .|.++. ++.+.+.      +++|++|
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV   82 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4689999999999999999888889999888765432 222 22222 122  233332 2222221      5789999


Q ss_pred             ECCCChh-------------------------hHHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHHHHHH
Q 021831          243 DTIGAPE-------------------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKR  295 (307)
Q Consensus       243 d~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (307)
                      .+.|...                         ....++..++  ..|++|.++.............++....+...+-+.
T Consensus        83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~~  162 (275)
T PRK08263         83 NNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEA  162 (275)
T ss_pred             ECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHHHHHHH
Confidence            9988521                         1233333343  357899988754433222222333444443333333


Q ss_pred             Hhh-hhcccccc
Q 021831          296 MQT-WYSYGIGC  306 (307)
Q Consensus       296 ~~~-~~~~~i~~  306 (307)
                      +.. ...+||++
T Consensus       163 la~e~~~~gi~v  174 (275)
T PRK08263        163 LAQEVAEFGIKV  174 (275)
T ss_pred             HHHHhhhhCcEE
Confidence            332 23446654

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.04  E-value=0.011  Score=52.59  Aligned_cols=95  Identities=17%  Similarity=0.152  Sum_probs=57.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCcc-HHHH----HHcCCceEEeCCChhHHHHhcCCccEEEECC
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDRV----LAAGAEQAVDYSSKDIELAIKGKFDAVLDTI  245 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~-~~~~----~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~  245 (307)
                      .+++++||-.|. |. |..++.+++ .|+ +|+++..+.. .+.+    ...+....+.....+......++||+|+...
T Consensus       157 ~~~g~~VLDvGc-Gs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~~~~~~~~~fDlVvan~  233 (288)
T TIGR00406       157 DLKDKNVIDVGC-GS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIYLEQPIEGKADVIVANI  233 (288)
T ss_pred             cCCCCEEEEeCC-Ch-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecccccccCCCceEEEEec
Confidence            457899999993 44 887777665 576 8998855433 3332    2233221111111111122235799998865


Q ss_pred             CCh---hhHHHHHhcccCCcEEEEecc
Q 021831          246 GAP---ETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       246 g~~---~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      ...   ..+..+.+.|+|||.++..|.
T Consensus       234 ~~~~l~~ll~~~~~~LkpgG~li~sgi  260 (288)
T TIGR00406       234 LAEVIKELYPQFSRLVKPGGWLILSGI  260 (288)
T ss_pred             CHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            433   355677899999999998765

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.04  E-value=0.012  Score=50.81  Aligned_cols=74  Identities=22%  Similarity=0.361  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc---eEEeCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE---QAVDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~---~v~~~~~~~-~~~~~~------~~~  238 (307)
                      .+.++||+|++|.+|..+++.+...|.+|+.+.+.... +.    ++..+..   ...|..+.+ ..+.+.      +++
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV   82 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            36799999999999999999988899999988765432 21    2222322   122333332 222221      478


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|.+.|.
T Consensus        83 d~vi~~a~~   91 (258)
T PRK12429         83 DILVNNAGI   91 (258)
T ss_pred             CEEEECCCC
Confidence            999998873

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=97.01  E-value=0.0073  Score=53.06  Aligned_cols=110  Identities=20%  Similarity=0.228  Sum_probs=75.2

Q ss_pred             HHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-----HHHHHcCCceEEeCCChhHHHHh
Q 021831          160 LTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQAVDYSSKDIELAI  234 (307)
Q Consensus       160 ~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-----~~~~~~g~~~v~~~~~~~~~~~~  234 (307)
                      ..+...+....+++||++||=+|  .+-|.+++-+|+..|++|++++-++++     +.+++.|...-+...-.++.. +
T Consensus        58 ~~k~~~~~~kl~L~~G~~lLDiG--CGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd-~  134 (283)
T COG2230          58 RAKLDLILEKLGLKPGMTLLDIG--CGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRD-F  134 (283)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEeC--CChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccc-c
Confidence            44555666788999999999999  568999999999999999999877663     234566654111111112211 1


Q ss_pred             cCCccEEE-----ECCCC---hhhHHHHHhcccCCcEEEEeccCcc
Q 021831          235 KGKFDAVL-----DTIGA---PETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       235 ~~~~dvvi-----d~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      .+.||-|+     +.+|.   ...+..+..+|+++|++++..-...
T Consensus       135 ~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~~  180 (283)
T COG2230         135 EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITGP  180 (283)
T ss_pred             ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecCC
Confidence            13477664     34565   3467888999999999988775443

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.00  E-value=0.023  Score=49.98  Aligned_cols=115  Identities=17%  Similarity=0.238  Sum_probs=68.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCcc-H---HHHHHcCC--ceEEeCCCh-h---HHHHhc---CCc
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKS-I---DRVLAAGA--EQAVDYSSK-D---IELAIK---GKF  238 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~-~~~~~-~---~~~~~~g~--~~v~~~~~~-~---~~~~~~---~~~  238 (307)
                      -.|+.|||+||++++|.+.++=...+|++++.. .+.+. .   +..++.|.  ..+.|.++. +   ....++   |.+
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V  115 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDV  115 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence            469999999999999988776666779976655 33332 2   22444452  233444442 2   222232   689


Q ss_pred             cEEEECCCCh----------hhHH----------------HHHhcc-cCCcEEEEeccCcccccccccceechhHH
Q 021831          239 DAVLDTIGAP----------ETER----------------LGLNFL-KRGGHYMTLHGETAALADHYGLALGLPIA  287 (307)
Q Consensus       239 dvvid~~g~~----------~~~~----------------~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  287 (307)
                      |+++|++|--          +.++                .+-..+ ++.|++|++....+...-.....+++...
T Consensus       116 ~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK~  191 (300)
T KOG1201|consen  116 DILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASKF  191 (300)
T ss_pred             eEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhHH
Confidence            9999999841          1111                111223 37899999998766444444444444333

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.00  E-value=0.018  Score=49.93  Aligned_cols=74  Identities=20%  Similarity=0.373  Sum_probs=48.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--HHHHHHcCCc-eEEeCCChh-HHHHhc------CCccEEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDRVLAAGAE-QAVDYSSKD-IELAIK------GKFDAVLD  243 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--~~~~~~~g~~-~v~~~~~~~-~~~~~~------~~~dvvid  243 (307)
                      .+.+++|.|++|++|...++.+...|++|+.+.+...  .+.+...+.. ...|..+.. ..+.+.      +++|++|.
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~   85 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN   85 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4689999999999999999999899999887754322  2223333322 123444432 222111      57899999


Q ss_pred             CCCC
Q 021831          244 TIGA  247 (307)
Q Consensus       244 ~~g~  247 (307)
                      +.|.
T Consensus        86 ~ag~   89 (255)
T PRK06463         86 NAGI   89 (255)
T ss_pred             CCCc
Confidence            9874

>PRK07890 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.015  Score=50.33  Aligned_cols=74  Identities=20%  Similarity=0.303  Sum_probs=48.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HHH-H---HcCCc---eEEeCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV-L---AAGAE---QAVDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~-~---~~g~~---~v~~~~~~~-~~~~~~------~~~  238 (307)
                      .+.+++|.||+|.+|..+++.+...|++|+.+.++... +.+ .   ..+..   ...|.++.+ +...+.      +.+
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV   83 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence            46889999999999999999999999999888765432 111 1   22321   223443332 222111      578


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|.+.|.
T Consensus        84 d~vi~~ag~   92 (258)
T PRK07890         84 DALVNNAFR   92 (258)
T ss_pred             cEEEECCcc
Confidence            999999874

>PRK09291 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.014  Score=50.48  Aligned_cols=73  Identities=19%  Similarity=0.267  Sum_probs=49.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HHH----HHcCCc---eEEeCCCh-hHHHHhcCCccEEEECC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV----LAAGAE---QAVDYSSK-DIELAIKGKFDAVLDTI  245 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~----~~~g~~---~v~~~~~~-~~~~~~~~~~dvvid~~  245 (307)
                      +.++||+|++|.+|..+++.+...|++|+++.+.... ..+    ...+..   ...|..+. ++.....+++|++|++.
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a   81 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA   81 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence            4589999999999999999999999999988775432 111    222321   12344443 33333335899999998


Q ss_pred             CC
Q 021831          246 GA  247 (307)
Q Consensus       246 g~  247 (307)
                      |.
T Consensus        82 g~   83 (257)
T PRK09291         82 GI   83 (257)
T ss_pred             Cc
Confidence            73

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=96.98  E-value=0.0025  Score=53.89  Aligned_cols=99  Identities=22%  Similarity=0.323  Sum_probs=64.7

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCccH-----HHHHHcCCceE--EeCCChhHHHHhcCCc
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-----DRVLAAGAEQA--VDYSSKDIELAIKGKF  238 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~~~~~~~-----~~~~~~g~~~v--~~~~~~~~~~~~~~~~  238 (307)
                      +..++++|++||-+|  ++.|..++-+++..|-  +|+++-..+..     +.+.+++.+.+  +..+... ...-.+.|
T Consensus        66 ~~L~l~pg~~VLeIG--tGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~-g~~~~apf  142 (209)
T PF01135_consen   66 EALDLKPGDRVLEIG--TGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSE-GWPEEAPF  142 (209)
T ss_dssp             HHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGG-TTGGG-SE
T ss_pred             HHHhcCCCCEEEEec--CCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhh-ccccCCCc
Confidence            477899999999999  5678888888888775  67877655442     33556676533  2222111 11112579


Q ss_pred             cEEEECCCChhhHHHHHhcccCCcEEEEecc
Q 021831          239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       239 dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      |.|+-+.+-...-...++.|++||++|..=.
T Consensus       143 D~I~v~~a~~~ip~~l~~qL~~gGrLV~pi~  173 (209)
T PF01135_consen  143 DRIIVTAAVPEIPEALLEQLKPGGRLVAPIG  173 (209)
T ss_dssp             EEEEESSBBSS--HHHHHTEEEEEEEEEEES
T ss_pred             CEEEEeeccchHHHHHHHhcCCCcEEEEEEc
Confidence            9999988877566789999999999998544

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=96.98  E-value=0.0049  Score=57.15  Aligned_cols=108  Identities=19%  Similarity=0.175  Sum_probs=70.5

Q ss_pred             hHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCceEEeCCChhHHHHhcC
Q 021831          158 AALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKG  236 (307)
Q Consensus       158 ~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~  236 (307)
                      +....+..+.....+++|++||-+|.  +.|..+..+++..|++|+++..+++ .+.+++......++....++.+ +.+
T Consensus       151 Aq~~k~~~l~~~l~l~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~~~-l~~  227 (383)
T PRK11705        151 AQEAKLDLICRKLQLKPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQDYRD-LNG  227 (383)
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECchhh-cCC
Confidence            44455555656778899999999993  5788888999888999999966554 3444432211111111122222 235


Q ss_pred             CccEEEEC-----CCC---hhhHHHHHhcccCCcEEEEec
Q 021831          237 KFDAVLDT-----IGA---PETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       237 ~~dvvid~-----~g~---~~~~~~~~~~l~~~G~~v~~g  268 (307)
                      .||.|+..     +|.   ...+..+.+.|+|||.++...
T Consensus       228 ~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        228 QFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             CCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            79988753     343   236788888999999998753

>PRK06172 short chain dehydrogenase; Provisional

Probab=96.97  E-value=0.022  Score=49.27  Aligned_cols=74  Identities=22%  Similarity=0.323  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H----HHHHcCCc-eE--EeCCChh-HHH---Hhc---CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAE-QA--VDYSSKD-IEL---AIK---GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~----~~~~~g~~-~v--~~~~~~~-~~~---~~~---~~~  238 (307)
                      .+.+++|.|++|.+|..+++.+...|++|+.+.++.+. .    .+.+.+.. ..  .|..+.+ ..+   .+.   +++
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   85 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL   85 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999888899999988776432 1    12233322 22  2333322 222   121   578


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|.+.|.
T Consensus        86 d~li~~ag~   94 (253)
T PRK06172         86 DYAFNNAGI   94 (253)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.97  E-value=0.019  Score=51.57  Aligned_cols=74  Identities=26%  Similarity=0.307  Sum_probs=47.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc--cHH-H---HHHcCCce-EE--eCCChh-HHH---Hh--cCCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK--SID-R---VLAAGAEQ-AV--DYSSKD-IEL---AI--KGKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~--~~~-~---~~~~g~~~-v~--~~~~~~-~~~---~~--~~~~  238 (307)
                      .|.++||+|+++++|...++.+...|++|+...+..  ..+ .   ++..+... .+  |..+.+ ..+   .+  .+++
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i   90 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL   90 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence            478999999999999999998888999988875432  111 1   22334322 12  333321 111   11  1578


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|++.|.
T Consensus        91 D~li~nAG~   99 (306)
T PRK07792         91 DIVVNNAGI   99 (306)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK12937 short chain dehydrogenase; Provisional

Probab=96.97  E-value=0.029  Score=48.15  Aligned_cols=99  Identities=22%  Similarity=0.348  Sum_probs=61.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--HH----HHHHcCCc-eEE--eCCCh-hHHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--ID----RVLAAGAE-QAV--DYSSK-DIELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--~~----~~~~~g~~-~v~--~~~~~-~~~~~~~------~~  237 (307)
                      ++.++||+|++|.+|...++.+...|++++.+.++..  .+    .+...+.. +.+  |.++. +..+.+.      ++
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR   83 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999998877654322  11    12223321 222  33332 2222221      57


Q ss_pred             ccEEEECCCChh-------------------------hHHHHHhcccCCcEEEEeccCcc
Q 021831          238 FDAVLDTIGAPE-------------------------TERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       238 ~dvvid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      +|++|.+.|...                         ....+++.++.+|+++.++....
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~  143 (245)
T PRK12937         84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVI  143 (245)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccc
Confidence            899999987410                         02344455567789999986543

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.97  E-value=0.023  Score=49.18  Aligned_cols=74  Identities=26%  Similarity=0.381  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HHH----HHcC-CceEE--eCCCh-hHHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV----LAAG-AEQAV--DYSSK-DIELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~----~~~g-~~~v~--~~~~~-~~~~~~~------~~~  238 (307)
                      .+.+++|+|++|.+|..++..+...|++|+.+.++.+. +.+    +..+ ..+++  |..+. ++.+.+.      +.+
T Consensus         8 ~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (258)
T PRK06949          8 EGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTI   87 (258)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            57899999999999999999999999999988765432 222    1112 12222  33332 2222221      578


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|++.|.
T Consensus        88 d~li~~ag~   96 (258)
T PRK06949         88 DILVNNSGV   96 (258)
T ss_pred             CEEEECCCC
Confidence            999999884

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=96.96  E-value=0.024  Score=49.07  Aligned_cols=74  Identities=27%  Similarity=0.507  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eE--EeCCChh-HHH---Hhc---CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QA--VDYSSKD-IEL---AIK---GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v--~~~~~~~-~~~---~~~---~~~  238 (307)
                      .|.+++|.|+++.+|..+++.+...|++|+.+.++.+. ..    +++.+.. ..  .|..+.. +..   .+.   +++
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   89 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL   89 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            58899999999999999999888899999998775432 11    2233321 12  2333322 222   221   578


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|.+.|.
T Consensus        90 d~vi~~ag~   98 (256)
T PRK06124         90 DILVNNVGA   98 (256)
T ss_pred             CEEEECCCC
Confidence            999999884

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.96  E-value=0.0018  Score=57.09  Aligned_cols=102  Identities=27%  Similarity=0.369  Sum_probs=60.6

Q ss_pred             HHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H----HHHHcCCceEEeCCChhHHHHhcCC
Q 021831          163 WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQAVDYSSKDIELAIKGK  237 (307)
Q Consensus       163 ~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~----~~~~~g~~~v~~~~~~~~~~~~~~~  237 (307)
                      +..+.+.+++++|++||-+|  .+.|..+..+++..|++|.+++.++++ +    .+++.|....+.....++.+ +...
T Consensus        51 ~~~~~~~~~l~~G~~vLDiG--cGwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~~~-~~~~  127 (273)
T PF02353_consen   51 LDLLCEKLGLKPGDRVLDIG--CGWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDYRD-LPGK  127 (273)
T ss_dssp             HHHHHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-GGG----S
T ss_pred             HHHHHHHhCCCCCCEEEEeC--CCccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeeccc-cCCC
Confidence            34455678899999999999  458999999999999999999877653 2    24455642111111112221 2237


Q ss_pred             ccEEEE-----CCCCh---hhHHHHHhcccCCcEEEEe
Q 021831          238 FDAVLD-----TIGAP---ETERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       238 ~dvvid-----~~g~~---~~~~~~~~~l~~~G~~v~~  267 (307)
                      ||.|+.     .+|..   ..+..+.+.|+|||++++-
T Consensus       128 fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq  165 (273)
T PF02353_consen  128 FDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ  165 (273)
T ss_dssp             -SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred             CCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence            998755     45532   3578888999999999743

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=96.95  E-value=0.023  Score=49.44  Aligned_cols=133  Identities=15%  Similarity=0.222  Sum_probs=74.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--HHH----HHHcCCc---eEEeCCChh-HHH---Hhc---CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDR----VLAAGAE---QAVDYSSKD-IEL---AIK---GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--~~~----~~~~g~~---~v~~~~~~~-~~~---~~~---~~  237 (307)
                      .+.++||+||++.+|..+++.+...|++++.+.++..  ...    ++..+..   ...|.++.. ..+   .+.   ++
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   85 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT   85 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999998877755332  111    2223322   123444432 211   111   57


Q ss_pred             ccEEEECCCChh----------hH---------------HHHHhccc---CCcEEEEeccCcccccccccceechhHHHH
Q 021831          238 FDAVLDTIGAPE----------TE---------------RLGLNFLK---RGGHYMTLHGETAALADHYGLALGLPIATT  289 (307)
Q Consensus       238 ~dvvid~~g~~~----------~~---------------~~~~~~l~---~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  289 (307)
                      +|++|.+.|...          .+               ..++..+.   ..|+++.++.............++....+.
T Consensus        86 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~  165 (261)
T PRK08936         86 LDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGV  165 (261)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHHHHH
Confidence            899999988410          00               12333343   258999888754433322333344444444


Q ss_pred             HHHHHHHh-hhhcccccc
Q 021831          290 VLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       290 ~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+-+.+. .+..+||++
T Consensus       166 ~~~~~~la~e~~~~gi~v  183 (261)
T PRK08936        166 KLMTETLAMEYAPKGIRV  183 (261)
T ss_pred             HHHHHHHHHHHhhcCeEE
Confidence            44444443 334456654

>PRK07454 short chain dehydrogenase; Provisional

Probab=96.93  E-value=0.028  Score=48.19  Aligned_cols=75  Identities=21%  Similarity=0.352  Sum_probs=48.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HHH----HHcCCc-eE--EeCCChh-HHHHhc------CC
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV----LAAGAE-QA--VDYSSKD-IELAIK------GK  237 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~----~~~g~~-~v--~~~~~~~-~~~~~~------~~  237 (307)
                      ..+.+++|.|++|.+|..++..+...|++|+.+.++.+. ..+    ++.+.. .+  .|.++.+ ....+.      ++
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC   83 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            346789999999999999999999999999998776432 221    222222 12  2333322 212121      46


Q ss_pred             ccEEEECCCC
Q 021831          238 FDAVLDTIGA  247 (307)
Q Consensus       238 ~dvvid~~g~  247 (307)
                      .|++|++.|.
T Consensus        84 id~lv~~ag~   93 (241)
T PRK07454         84 PDVLINNAGM   93 (241)
T ss_pred             CCEEEECCCc
Confidence            8999999884

>PRK08303 short chain dehydrogenase; Provisional

Probab=96.93  E-value=0.027  Score=50.57  Aligned_cols=35  Identities=29%  Similarity=0.222  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~  208 (307)
                      .|.++||+|+++++|+++++.+...|++|+.+.++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~   41 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS   41 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence            47899999999999999999999999999888664

>PRK07023 short chain dehydrogenase; Provisional

Probab=96.93  E-value=0.012  Score=50.64  Aligned_cols=71  Identities=20%  Similarity=0.220  Sum_probs=45.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCc---eEEeCCChh-HHHH----h----c--CCccEEE
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE---QAVDYSSKD-IELA----I----K--GKFDAVL  242 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~---~v~~~~~~~-~~~~----~----~--~~~dvvi  242 (307)
                      ++||.|++|.+|..+++.+...|++|+.+.++.........+.+   ...|..+.+ +...    .    .  ++.|++|
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v   82 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLI   82 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEE
Confidence            69999999999999999988899999888766543332333322   123433322 2221    1    1  2578898


Q ss_pred             ECCCC
Q 021831          243 DTIGA  247 (307)
Q Consensus       243 d~~g~  247 (307)
                      .+.|.
T Consensus        83 ~~ag~   87 (243)
T PRK07023         83 NNAGT   87 (243)
T ss_pred             EcCcc
Confidence            88764

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.92  E-value=0.019  Score=49.75  Aligned_cols=74  Identities=19%  Similarity=0.367  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc---eEEeCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE---QAVDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~---~v~~~~~~~-~~~~~~------~~~  238 (307)
                      .|.++||+|+++++|..+++.+...|++|+.+.++.+ .+.    ++..+..   ...|..+.+ ..+.+.      +++
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4789999999999999999999999999988866543 222    1222322   123444332 222111      579


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|++.|.
T Consensus        88 d~lv~~ag~   96 (253)
T PRK05867         88 DIAVCNAGI   96 (253)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=96.92  E-value=0.025  Score=49.09  Aligned_cols=74  Identities=22%  Similarity=0.315  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHcCCc-eEE--eCCCh-hHHHHhc------CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGAE-QAV--DYSSK-DIELAIK------GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~g~~-~v~--~~~~~-~~~~~~~------~~~dvv  241 (307)
                      .+.++||+|++|.+|..+++.+...|++|+.+.++.+. +. ...++.. ..+  |..+. +....+.      +.+|++
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   84 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL   84 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            36789999999999999999999999999988765432 22 2233321 122  33332 2222221      578999


Q ss_pred             EECCCC
Q 021831          242 LDTIGA  247 (307)
Q Consensus       242 id~~g~  247 (307)
                      |.+.|.
T Consensus        85 i~~ag~   90 (257)
T PRK07067         85 FNNAAL   90 (257)
T ss_pred             EECCCc
Confidence            998873

>PRK06125 short chain dehydrogenase; Provisional

Probab=96.92  E-value=0.029  Score=48.80  Aligned_cols=74  Identities=30%  Similarity=0.522  Sum_probs=48.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHc-CCc-eE--EeCCCh-hHHHHhc--CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAA-GAE-QA--VDYSSK-DIELAIK--GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~-g~~-~v--~~~~~~-~~~~~~~--~~~dvv  241 (307)
                      .+.++||.|+++++|...++.+...|++|+.+.++.+ .+.    +.+. +.. +.  .|..+. +..+.+.  +.+|++
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l   85 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL   85 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence            4789999999999999999988889999988876543 221    1111 221 22  233332 2222222  579999


Q ss_pred             EECCCC
Q 021831          242 LDTIGA  247 (307)
Q Consensus       242 id~~g~  247 (307)
                      |++.|.
T Consensus        86 v~~ag~   91 (259)
T PRK06125         86 VNNAGA   91 (259)
T ss_pred             EECCCC
Confidence            999874

>PRK06196 oxidoreductase; Provisional

Probab=96.91  E-value=0.015  Score=52.29  Aligned_cols=74  Identities=15%  Similarity=0.345  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHcCCceE--EeCCChh-H---HHHhc---CCccEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGAEQA--VDYSSKD-I---ELAIK---GKFDAVL  242 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~g~~~v--~~~~~~~-~---~~~~~---~~~dvvi  242 (307)
                      .+.++||+||+|++|..++..+...|++|+.+.++.+. +. ..++..-..  .|..+.+ .   .+.+.   +++|++|
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li  104 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI  104 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            46899999999999999999888899999988776432 21 222221122  3444332 2   22221   5789999


Q ss_pred             ECCCC
Q 021831          243 DTIGA  247 (307)
Q Consensus       243 d~~g~  247 (307)
                      ++.|.
T Consensus       105 ~nAg~  109 (315)
T PRK06196        105 NNAGV  109 (315)
T ss_pred             ECCCC
Confidence            99873

>PRK06198 short chain dehydrogenase; Provisional

Probab=96.91  E-value=0.027  Score=48.88  Aligned_cols=74  Identities=23%  Similarity=0.353  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCcc-HH----HHHHcCCc---eEEeCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKS-ID----RVLAAGAE---QAVDYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~-Vi~~~~~~~-~~----~~~~~g~~---~v~~~~~~~-~~~~~~------~~  237 (307)
                      .+.+++|.|++|.+|..+++.+...|++ |+.+.+... ..    .+++.+..   ...|..+.+ +.+.+.      ++
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR   84 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5688999999999999999999999997 888766532 22    12233432   223444432 222221      57


Q ss_pred             ccEEEECCCC
Q 021831          238 FDAVLDTIGA  247 (307)
Q Consensus       238 ~dvvid~~g~  247 (307)
                      +|++|++.|.
T Consensus        85 id~li~~ag~   94 (260)
T PRK06198         85 LDALVNAAGL   94 (260)
T ss_pred             CCEEEECCCc
Confidence            9999999884

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.90  E-value=0.032  Score=49.41  Aligned_cols=137  Identities=17%  Similarity=0.162  Sum_probs=81.7

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHH--HHHcCC----ceEEeCCC--------hhHHHHhc
Q 021831          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR--VLAAGA----EQAVDYSS--------KDIELAIK  235 (307)
Q Consensus       170 ~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~--~~~~g~----~~v~~~~~--------~~~~~~~~  235 (307)
                      ...++..+++|.|+++++|++.+.-++..|+.|..+.++.++..  .+.++.    ..|..++.        +...+.+.
T Consensus        28 ~~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~  107 (331)
T KOG1210|consen   28 VKPKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELR  107 (331)
T ss_pred             cccCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhh
Confidence            34456689999999999999999999999999999988765322  233332    11111111        11222222


Q ss_pred             ---CCccEEEECCCChh-------------------------hHHHHHhccc---CCcEEEEeccCccc-ccccccceec
Q 021831          236 ---GKFDAVLDTIGAPE-------------------------TERLGLNFLK---RGGHYMTLHGETAA-LADHYGLALG  283 (307)
Q Consensus       236 ---~~~dvvid~~g~~~-------------------------~~~~~~~~l~---~~G~~v~~g~~~~~-~~~~~~~~~~  283 (307)
                         +.+|.+|.|.|...                         ...+++..++   +-|++++++..... ....++....
T Consensus       108 ~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~  187 (331)
T KOG1210|consen  108 DLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSP  187 (331)
T ss_pred             hccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCccccccccc
Confidence               46899999998620                         1133444443   34699999977542 2222333334


Q ss_pred             hhHHHHHHHHHHHhhhhcccccc
Q 021831          284 LPIATTVLLKKRMQTWYSYGIGC  306 (307)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~i~~  306 (307)
                      +..+-..+........+.++|++
T Consensus       188 sK~alrgLa~~l~qE~i~~~v~V  210 (331)
T KOG1210|consen  188 SKFALRGLAEALRQELIKYGVHV  210 (331)
T ss_pred             HHHHHHHHHHHHHHHHhhcceEE
Confidence            44444444444455556666654

>PRK12829 short chain dehydrogenase; Provisional

Probab=96.90  E-value=0.027  Score=48.87  Aligned_cols=76  Identities=21%  Similarity=0.335  Sum_probs=50.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HHH-HHcCCc----eEEeCCChh-HHHHhc------CCcc
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV-LAAGAE----QAVDYSSKD-IELAIK------GKFD  239 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~-~~~g~~----~v~~~~~~~-~~~~~~------~~~d  239 (307)
                      -++.++||.||+|.+|..+++.+...|++|+.+.++.+. +.+ .+....    ...|..++. +.+.+.      +++|
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   88 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD   88 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            467899999999999999999999999999888775432 222 222211    223444332 211111      5799


Q ss_pred             EEEECCCCh
Q 021831          240 AVLDTIGAP  248 (307)
Q Consensus       240 vvid~~g~~  248 (307)
                      +||.+.|..
T Consensus        89 ~vi~~ag~~   97 (264)
T PRK12829         89 VLVNNAGIA   97 (264)
T ss_pred             EEEECCCCC
Confidence            999998753

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=96.89  E-value=0.019  Score=46.17  Aligned_cols=117  Identities=20%  Similarity=0.243  Sum_probs=68.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC---ccHHH----HHHcCCc-eEE--eCCCh-hHHH---Hhc---CC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS---KSIDR----VLAAGAE-QAV--DYSSK-DIEL---AIK---GK  237 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~---~~~~~----~~~~g~~-~v~--~~~~~-~~~~---~~~---~~  237 (307)
                      +++||+||++++|+..++.+...|+ +|+.+.++   ++...    ++..+.. .++  |..+. +..+   .+.   +.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            3789999999999999888888888 56666666   22221    2334432 222  22322 2222   222   58


Q ss_pred             ccEEEECCCChh----------h---------------HHHHHhcccCCcEEEEeccCcccccccccceechhHHHHHHH
Q 021831          238 FDAVLDTIGAPE----------T---------------ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLL  292 (307)
Q Consensus       238 ~dvvid~~g~~~----------~---------------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  292 (307)
                      +|++|.+.|...          .               ...+..  +.+|+++.++.............+.....+...+
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~g~iv~~sS~~~~~~~~~~~~Y~askaal~~~  158 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP--QGGGKIVNISSIAGVRGSPGMSAYSASKAALRGL  158 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH--HTTEEEEEEEEGGGTSSSTTBHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehhee--ccccceEEecchhhccCCCCChhHHHHHHHHHHH
Confidence            999999988521          0               012222  5789999999876654444444444444444444


Q ss_pred             HH
Q 021831          293 KK  294 (307)
Q Consensus       293 ~~  294 (307)
                      -.
T Consensus       159 ~~  160 (167)
T PF00106_consen  159 TQ  160 (167)
T ss_dssp             HH
T ss_pred             HH
Confidence            33

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08278 short chain dehydrogenase; Provisional

Probab=96.89  E-value=0.03  Score=49.26  Aligned_cols=36  Identities=17%  Similarity=0.402  Sum_probs=31.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK  209 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~  209 (307)
                      .+.++||+||+|.+|...++.+...|++|+.+.++.
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~   40 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTA   40 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeccc
Confidence            467899999999999999999888999998887643

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=96.89  E-value=0.032  Score=48.33  Aligned_cols=133  Identities=17%  Similarity=0.218  Sum_probs=75.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc-e--EEeCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE-Q--AVDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~-~--v~~~~~~~-~~~~~~------~~~  238 (307)
                      .+.++||.|+++.+|...+..+...|++++.+.+..+ .+.    ++..+.+ +  ..|.++.+ ..+.+.      +++
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   89 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV   89 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999988899999888866543 221    2222322 2  23444432 222111      578


Q ss_pred             cEEEECCCCh---------hh---------------HHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHHH
Q 021831          239 DAVLDTIGAP---------ET---------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLL  292 (307)
Q Consensus       239 dvvid~~g~~---------~~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  292 (307)
                      |++|.+.|..         ..               ...++..+.  ..|+++.++.............++....+...+
T Consensus        90 d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  169 (255)
T PRK06113         90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHL  169 (255)
T ss_pred             CEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHHHHHHH
Confidence            9999998741         01               122233332  347999998765433332223344444444444


Q ss_pred             HHHHhh-hhcccccc
Q 021831          293 KKRMQT-WYSYGIGC  306 (307)
Q Consensus       293 ~~~~~~-~~~~~i~~  306 (307)
                      -+.+.. +...+|++
T Consensus       170 ~~~la~~~~~~~i~v  184 (255)
T PRK06113        170 VRNMAFDLGEKNIRV  184 (255)
T ss_pred             HHHHHHHhhhhCeEE
Confidence            444432 23445653

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=96.87  E-value=0.032  Score=46.71  Aligned_cols=96  Identities=24%  Similarity=0.357  Sum_probs=64.1

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCcc-HHH----HHHcC-Cce--EEeCCChhHHHHhcCCc
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKS-IDR----VLAAG-AEQ--AVDYSSKDIELAIKGKF  238 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G--~~Vi~~~~~~~-~~~----~~~~g-~~~--v~~~~~~~~~~~~~~~~  238 (307)
                      ...+.++++||-.|+ |. |..++.+++..+  .+|+++..+.+ .+.    ++.++ .+.  ++..+..++.....+.|
T Consensus        35 ~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~~~  112 (198)
T PRK00377         35 KLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINEKF  112 (198)
T ss_pred             HcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCCCC
Confidence            567889999999995 54 999999988764  48999865443 332    44566 232  22222223323333579


Q ss_pred             cEEEECCCC---hhhHHHHHhcccCCcEEEE
Q 021831          239 DAVLDTIGA---PETERLGLNFLKRGGHYMT  266 (307)
Q Consensus       239 dvvid~~g~---~~~~~~~~~~l~~~G~~v~  266 (307)
                      |.||...+.   ...+..+.+.|+++|+++.
T Consensus       113 D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~  143 (198)
T PRK00377        113 DRIFIGGGSEKLKEIISASWEIIKKGGRIVI  143 (198)
T ss_pred             CEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence            999986553   3367788889999999986

>PRK06181 short chain dehydrogenase; Provisional

Probab=96.87  E-value=0.015  Score=50.56  Aligned_cols=73  Identities=19%  Similarity=0.336  Sum_probs=47.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eE--EeCCChh-HHHHhc------CCcc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QA--VDYSSKD-IELAIK------GKFD  239 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v--~~~~~~~-~~~~~~------~~~d  239 (307)
                      +.++||.|++|.+|..+++.+...|++|+.+.++... +.    +...+.. .+  .|..+.+ +.+.+.      +++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            3579999999999999999998999999988776432 11    2233332 12  2333322 222221      4789


Q ss_pred             EEEECCCC
Q 021831          240 AVLDTIGA  247 (307)
Q Consensus       240 vvid~~g~  247 (307)
                      ++|.+.|.
T Consensus        81 ~vi~~ag~   88 (263)
T PRK06181         81 ILVNNAGI   88 (263)
T ss_pred             EEEECCCc
Confidence            99999874

>PRK08862 short chain dehydrogenase; Provisional

Probab=96.84  E-value=0.033  Score=47.70  Aligned_cols=73  Identities=15%  Similarity=0.130  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eE--EeCCCh-hHH---HHhc---C-C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QA--VDYSSK-DIE---LAIK---G-K  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v--~~~~~~-~~~---~~~~---~-~  237 (307)
                      .|.+++|.|+++++|.+.+.-+...|++|+.+.++.+. +.    +++.+.+ ..  .|..+. +..   +.+.   + .
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA   83 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            47899999999999999988888899999888665432 21    2233432 12  233332 222   2221   5 7


Q ss_pred             ccEEEECCC
Q 021831          238 FDAVLDTIG  246 (307)
Q Consensus       238 ~dvvid~~g  246 (307)
                      +|++|++.|
T Consensus        84 iD~li~nag   92 (227)
T PRK08862         84 PDVLVNNWT   92 (227)
T ss_pred             CCEEEECCc
Confidence            999999986

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=96.84  E-value=0.031  Score=48.49  Aligned_cols=132  Identities=17%  Similarity=0.228  Sum_probs=72.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-H---HH-cCC--ceEE--eCCChh-HH---HHhc---CC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-V---LA-AGA--EQAV--DYSSKD-IE---LAIK---GK  237 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~---~~-~g~--~~v~--~~~~~~-~~---~~~~---~~  237 (307)
                      +.++||.|++|.+|...+..+...|++|+.+.++.. .+. .   +. .+.  .+.+  |.++.+ ..   +.+.   ++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999889999988876543 211 1   11 221  1222  333322 11   1221   57


Q ss_pred             ccEEEECCCChh----------h---------------HHHHHhccc-C--CcEEEEeccCcccccccccceechhHHHH
Q 021831          238 FDAVLDTIGAPE----------T---------------ERLGLNFLK-R--GGHYMTLHGETAALADHYGLALGLPIATT  289 (307)
Q Consensus       238 ~dvvid~~g~~~----------~---------------~~~~~~~l~-~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  289 (307)
                      +|++|++.|...          .               ...++..+. .  .|+++.++.............++....+.
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~  161 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGG  161 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHHH
Confidence            899999987310          0               123444442 2  47999887754322222223344444444


Q ss_pred             HHHHHHHh-hhhcccccc
Q 021831          290 VLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       290 ~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+-+.+. ...++||++
T Consensus       162 ~~l~~~la~e~~~~gi~v  179 (259)
T PRK12384        162 VGLTQSLALDLAEYGITV  179 (259)
T ss_pred             HHHHHHHHHHHHHcCcEE
Confidence            44433333 224566664

>PRK05855 short chain dehydrogenase; Validated

Probab=96.82  E-value=0.02  Score=55.70  Aligned_cols=133  Identities=26%  Similarity=0.314  Sum_probs=75.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eE--EeCCChh-H---HHHhc---CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QA--VDYSSKD-I---ELAIK---GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v--~~~~~~~-~---~~~~~---~~~  238 (307)
                      .+.++||+||+|++|...++.+...|++|+.+.++... +.    +++.|.. ..  .|.++.+ .   .+.+.   +.+
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  393 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP  393 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            46789999999999999999888899999888776432 21    2233432 12  3444432 1   12221   578


Q ss_pred             cEEEECCCChh----------hH---------------HHHHhccc---CCcEEEEeccCcccccccccceechhHHHHH
Q 021831          239 DAVLDTIGAPE----------TE---------------RLGLNFLK---RGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       239 dvvid~~g~~~----------~~---------------~~~~~~l~---~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      |++|++.|...          .+               ..++..+.   .+|++|.++.............++....+..
T Consensus       394 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~  473 (582)
T PRK05855        394 DIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVL  473 (582)
T ss_pred             cEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHHHHH
Confidence            99999988520          01               12222232   2589999987655333333333444444444


Q ss_pred             HHHHHHh-hhhcccccc
Q 021831          291 LLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~-~~~~~~i~~  306 (307)
                      .+...+. .+..+||++
T Consensus       474 ~~~~~l~~e~~~~gi~v  490 (582)
T PRK05855        474 MLSECLRAELAAAGIGV  490 (582)
T ss_pred             HHHHHHHHHhcccCcEE
Confidence            4444433 334557764

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=96.82  E-value=0.042  Score=47.95  Aligned_cols=74  Identities=22%  Similarity=0.395  Sum_probs=48.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eE--EeCCChh-H---HHHhc---CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QA--VDYSSKD-I---ELAIK---GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v--~~~~~~~-~---~~~~~---~~~  238 (307)
                      .+.+++|.|+++.+|..++..+...|++|+.+.++.+. +.    ++..+.. ..  .|.++.. .   .+.+.   +++
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI   88 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            56789999999999999998888899998888655432 11    2233432 12  3333322 1   11111   568


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|.+.|.
T Consensus        89 d~li~~ag~   97 (265)
T PRK07097         89 DILVNNAGI   97 (265)
T ss_pred             CEEEECCCC
Confidence            999999874

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=96.82  E-value=0.055  Score=47.95  Aligned_cols=135  Identities=11%  Similarity=0.144  Sum_probs=85.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHH---cCC--ceEEeCCChh-HHHHhc--------C
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLA---AGA--EQAVDYSSKD-IELAIK--------G  236 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~---~g~--~~v~~~~~~~-~~~~~~--------~  236 (307)
                      .-++..|+|+|..+++|...+.-+...|.+|++.+-.++ .+.++.   .+.  +-.+|.+.++ ..+...        .
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~  105 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED  105 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence            345677999999999999999999999999999864332 222221   121  2234555433 222221        3


Q ss_pred             CccEEEECCCCh--------------------------hhHHHHHhccc-CCcEEEEeccCcccccccccceechhHHHH
Q 021831          237 KFDAVLDTIGAP--------------------------ETERLGLNFLK-RGGHYMTLHGETAALADHYGLALGLPIATT  289 (307)
Q Consensus       237 ~~dvvid~~g~~--------------------------~~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  289 (307)
                      +.-.++|++|..                          ......+.+++ ..||+|.++...++......-.++....+.
T Consensus       106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p~~g~Y~~SK~aV  185 (322)
T KOG1610|consen  106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALPALGPYCVSKFAV  185 (322)
T ss_pred             cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCcccccchhhHHHH
Confidence            677888988831                          11234455565 469999999988866665555556666666


Q ss_pred             HHHHHHHh-hhhcccccc
Q 021831          290 VLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       290 ~~~~~~~~-~~~~~~i~~  306 (307)
                      +.+...+- ...+.||+|
T Consensus       186 eaf~D~lR~EL~~fGV~V  203 (322)
T KOG1610|consen  186 EAFSDSLRRELRPFGVKV  203 (322)
T ss_pred             HHHHHHHHHHHHhcCcEE
Confidence            66666655 445668775

>PRK06101 short chain dehydrogenase; Provisional

Probab=96.81  E-value=0.04  Score=47.33  Aligned_cols=131  Identities=18%  Similarity=0.122  Sum_probs=70.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HHHHHcC-Cc--eEEeCCChh-HHHHhc---CCccEEEECCCC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAG-AE--QAVDYSSKD-IELAIK---GKFDAVLDTIGA  247 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~~~~g-~~--~v~~~~~~~-~~~~~~---~~~dvvid~~g~  247 (307)
                      .+++|.||+|++|...+..+...|++|+.+.++.+. +.+...+ ..  ...|.++.+ ..+.+.   ...|.++.+.|.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~   81 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGD   81 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCcc
Confidence            468999999999999888888889999988775432 2232222 11  223444432 222222   246777766653


Q ss_pred             hh-------------------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHHHHHHHHHHHh-hhhc
Q 021831          248 PE-------------------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ-TWYS  301 (307)
Q Consensus       248 ~~-------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  301 (307)
                      ..                         ....+...++++++++.++.............++........+...+. .+..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~  161 (240)
T PRK06101         82 CEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRP  161 (240)
T ss_pred             cccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCCchhhHHHHHHHHHHHHHHHHHHh
Confidence            10                         012233345567888888765433222222223333344433333332 3345


Q ss_pred             ccccc
Q 021831          302 YGIGC  306 (307)
Q Consensus       302 ~~i~~  306 (307)
                      +||++
T Consensus       162 ~gi~v  166 (240)
T PRK06101        162 KGIEV  166 (240)
T ss_pred             cCceE
Confidence            56654

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=96.80  E-value=0.035  Score=47.54  Aligned_cols=74  Identities=18%  Similarity=0.345  Sum_probs=47.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHH-HHHcCCc-eE--EeCCCh-hHHHH---hc---CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDR-VLAAGAE-QA--VDYSSK-DIELA---IK---GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~-~~~~g~~-~v--~~~~~~-~~~~~---~~---~~~dvv  241 (307)
                      ++.++||.|++|.+|+.+++.+...|+.|+...+.. +.+. ...++.. .+  .|..+. +..+.   +.   +++|++
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL   84 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            467999999999999999999988999887765543 2222 2333321 22  233332 22221   11   578999


Q ss_pred             EECCCC
Q 021831          242 LDTIGA  247 (307)
Q Consensus       242 id~~g~  247 (307)
                      |.+.|.
T Consensus        85 i~~ag~   90 (245)
T PRK12936         85 VNNAGI   90 (245)
T ss_pred             EECCCC
Confidence            999884

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.80  E-value=0.034  Score=48.33  Aligned_cols=133  Identities=13%  Similarity=0.110  Sum_probs=73.5

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCC------------ccH-H---HHHHcCCce-E--EeCCCh-hHH
Q 021831          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGS------------KSI-D---RVLAAGAEQ-A--VDYSSK-DIE  231 (307)
Q Consensus       174 ~g~~VlI~Ga~--g~~G~~~~~~a~~~G~~Vi~~~~~------------~~~-~---~~~~~g~~~-v--~~~~~~-~~~  231 (307)
                      .|.++||.|++  +++|...+..+...|++|+.+.+.            ++. +   .+++.|... .  .|.++. +..
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~   84 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPK   84 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            47899999997  489999999999999998876321            011 1   123334321 2  233332 222


Q ss_pred             HHh---c---CCccEEEECCCChh-------------------------hHHHHHhccc--CCcEEEEeccCcccccccc
Q 021831          232 LAI---K---GKFDAVLDTIGAPE-------------------------TERLGLNFLK--RGGHYMTLHGETAALADHY  278 (307)
Q Consensus       232 ~~~---~---~~~dvvid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~  278 (307)
                      +.+   .   +..|++|.+.|...                         ....++..++  .+|++|.++..........
T Consensus        85 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  164 (256)
T PRK12859         85 ELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMVG  164 (256)
T ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCCCC
Confidence            211   1   46899999987410                         0123344553  3689999988765433333


Q ss_pred             cceechhHHHHHHHHHHHh-hhhcccccc
Q 021831          279 GLALGLPIATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ...++....+...+-+.+. .+..++|++
T Consensus       165 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v  193 (256)
T PRK12859        165 ELAYAATKGAIDALTSSLAAEVAHLGITV  193 (256)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhhhCeEE
Confidence            3333444444444433333 334556654

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.80  E-value=0.048  Score=46.30  Aligned_cols=72  Identities=18%  Similarity=0.301  Sum_probs=47.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCceE--EeCCChh----HHHHhc-CCccEEEECCCC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQA--VDYSSKD----IELAIK-GKFDAVLDTIGA  247 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~~v--~~~~~~~----~~~~~~-~~~dvvid~~g~  247 (307)
                      .+++|.|++|++|...++.+...|++|+++.++.. ...+++++...+  .|.++.+    +.+.+. +++|++|.+.|.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~   81 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGI   81 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcc
Confidence            47999999999999999888889999999876543 333444332222  3333322    222222 469999998764

>PRK06138 short chain dehydrogenase; Provisional

Probab=96.79  E-value=0.027  Score=48.49  Aligned_cols=74  Identities=23%  Similarity=0.403  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H-HHHHc--CCc-eEE--eCCChh-HHHHhc------CCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAA--GAE-QAV--DYSSKD-IELAIK------GKFD  239 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~-~~~~~--g~~-~v~--~~~~~~-~~~~~~------~~~d  239 (307)
                      .+.+++|.|++|.+|...++.+...|++|+.+.++... . ...++  +.. ..+  |..+.+ ..+.+.      +++|
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   83 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD   83 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46799999999999999999888889999988766432 1 12222  221 222  333322 222111      5799


Q ss_pred             EEEECCCC
Q 021831          240 AVLDTIGA  247 (307)
Q Consensus       240 vvid~~g~  247 (307)
                      ++|.+.|.
T Consensus        84 ~vi~~ag~   91 (252)
T PRK06138         84 VLVNNAGF   91 (252)
T ss_pred             EEEECCCC
Confidence            99999884

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.79  E-value=0.02  Score=46.73  Aligned_cols=99  Identities=17%  Similarity=0.240  Sum_probs=67.3

Q ss_pred             ccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHH
Q 021831          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (307)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (307)
                      ...++...++...++....--.|.+|+|+|++..+|..++..+..+|++|+.+.+..                  +++.+
T Consensus        22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~------------------~~l~~   83 (168)
T cd01080          22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT------------------KNLKE   83 (168)
T ss_pred             CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc------------------hhHHH
Confidence            444555555555555444445799999999733469999999999999877665542                  12222


Q ss_pred             HhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       233 ~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      .+ ..+|+||.+++.+..+..  ..++++-.++.++.+..
T Consensus        84 ~l-~~aDiVIsat~~~~ii~~--~~~~~~~viIDla~prd  120 (168)
T cd01080          84 HT-KQADIVIVAVGKPGLVKG--DMVKPGAVVIDVGINRV  120 (168)
T ss_pred             HH-hhCCEEEEcCCCCceecH--HHccCCeEEEEccCCCc
Confidence            22 459999999999743222  35677888899998874

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK12367 short chain dehydrogenase; Provisional

Probab=96.79  E-value=0.009  Score=51.86  Aligned_cols=74  Identities=19%  Similarity=0.191  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHH-HHHcCCc--eEEeCCChhHHHHhcCCccEEEECCCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR-VLAAGAE--QAVDYSSKDIELAIKGKFDAVLDTIGA  247 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~-~~~~g~~--~v~~~~~~~~~~~~~~~~dvvid~~g~  247 (307)
                      .|.+++|.||+|++|...++.+...|++|+.+.+...... ....+..  ...|..+.+-.+...+++|++|++.|.
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~   89 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGI   89 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence            3689999999999999999999899999998876542111 1111111  223444433222233679999999874

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.78  E-value=0.034  Score=47.88  Aligned_cols=74  Identities=19%  Similarity=0.335  Sum_probs=46.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCccH--H---HHHHcCCc-eE--EeCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKSI--D---RVLAAGAE-QA--VDYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~-~~~~~~--~---~~~~~g~~-~v--~~~~~~~-~~~~~~------~~  237 (307)
                      ++.++||.||+|.+|+.++..+...|++|+.. .+....  +   ..+..+.. ..  .|.++.+ ....+.      ++
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999999999988764 443322  1   12233332 22  2333322 222111      46


Q ss_pred             ccEEEECCCC
Q 021831          238 FDAVLDTIGA  247 (307)
Q Consensus       238 ~dvvid~~g~  247 (307)
                      +|++|++.|.
T Consensus        83 id~vi~~ag~   92 (250)
T PRK08063         83 LDVFVNNAAS   92 (250)
T ss_pred             CCEEEECCCC
Confidence            8999999874

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=96.76  E-value=0.031  Score=55.87  Aligned_cols=108  Identities=21%  Similarity=0.279  Sum_probs=62.5

Q ss_pred             ceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 021831          129 YADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (307)
Q Consensus       129 ~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~  208 (307)
                      ..+|.-++....+.+ +.++.+++-....+          ....-.+.++||+|++|++|..+++.+...|++|+.+.++
T Consensus       379 ~~~~~~~~~~~~f~~-eyw~~e~~kl~~~~----------~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~  447 (676)
T TIGR02632       379 VSEYVSLPEQEAFDI-EYWPLEEAKLRRMP----------KEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLN  447 (676)
T ss_pred             ccceecCchhhccch-hhhhhhHHhhccCC----------CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence            345555565555555 55544444221110          0011247899999999999999999988899999988765


Q ss_pred             cc-HHHH-HH----cCCc--e--EEeCCChh-HHHHhc------CCccEEEECCCC
Q 021831          209 KS-IDRV-LA----AGAE--Q--AVDYSSKD-IELAIK------GKFDAVLDTIGA  247 (307)
Q Consensus       209 ~~-~~~~-~~----~g~~--~--v~~~~~~~-~~~~~~------~~~dvvid~~g~  247 (307)
                      .. .+.+ .+    .+..  .  ..|.++.+ +.+.+.      +++|++|++.|.
T Consensus       448 ~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~  503 (676)
T TIGR02632       448 LEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGI  503 (676)
T ss_pred             HHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence            43 2221 11    2221  1  22333322 222221      579999999884

>PRK07024 short chain dehydrogenase; Provisional

Probab=96.76  E-value=0.038  Score=47.99  Aligned_cols=73  Identities=15%  Similarity=0.228  Sum_probs=46.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHcCC---ceE--EeCCChh-HHHHhc------CCccE
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAAGA---EQA--VDYSSKD-IELAIK------GKFDA  240 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~g~---~~v--~~~~~~~-~~~~~~------~~~dv  240 (307)
                      +.++||+|++|++|...++.+...|++|+.+.+..+ ... ..++..   ...  .|.++.+ +.+.+.      +.+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            468999999999999999999889999988876543 222 222211   112  2333322 222111      46899


Q ss_pred             EEECCCC
Q 021831          241 VLDTIGA  247 (307)
Q Consensus       241 vid~~g~  247 (307)
                      +|++.|.
T Consensus        82 lv~~ag~   88 (257)
T PRK07024         82 VIANAGI   88 (257)
T ss_pred             EEECCCc
Confidence            9999873

>PRK07035 short chain dehydrogenase; Provisional

Probab=96.75  E-value=0.033  Score=48.09  Aligned_cols=74  Identities=24%  Similarity=0.452  Sum_probs=47.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc-eEE--eCCChh-HHH---Hhc---CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE-QAV--DYSSKD-IEL---AIK---GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~-~v~--~~~~~~-~~~---~~~---~~~  238 (307)
                      .+.++||.|++|.+|...++.+...|++|+.+.+..+ .+.    +.+.+.. +.+  |..+.+ ...   .+.   +.+
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   86 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL   86 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3678999999999999999999999999998876533 222    2222321 222  333322 221   111   568


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|++.|.
T Consensus        87 d~li~~ag~   95 (252)
T PRK07035         87 DILVNNAAA   95 (252)
T ss_pred             CEEEECCCc
Confidence            999998873

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.71  E-value=0.011  Score=48.61  Aligned_cols=90  Identities=19%  Similarity=0.170  Sum_probs=63.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHH-HHHcCCceEEeCCChhHHHHhcCCccEEEECCCChh--
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR-VLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE--  249 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~--  249 (307)
                      -.|.+|.|+| .|.+|+.+++.++.+|++|++..+..+... ....+..    +.  ++.+.+ ...|+|+.+++...  
T Consensus        34 l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~----~~--~l~ell-~~aDiv~~~~plt~~T  105 (178)
T PF02826_consen   34 LRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVE----YV--SLDELL-AQADIVSLHLPLTPET  105 (178)
T ss_dssp             STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEE----ES--SHHHHH-HH-SEEEE-SSSSTTT
T ss_pred             cCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhcccccce----ee--ehhhhc-chhhhhhhhhcccccc
Confidence            3589999999 699999999999999999999988776544 4455532    11  222322 23799999887421  


Q ss_pred             ---hHHHHHhcccCCcEEEEeccC
Q 021831          250 ---TERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       250 ---~~~~~~~~l~~~G~~v~~g~~  270 (307)
                         .-...+..|+++..+|-++-.
T Consensus       106 ~~li~~~~l~~mk~ga~lvN~aRG  129 (178)
T PF02826_consen  106 RGLINAEFLAKMKPGAVLVNVARG  129 (178)
T ss_dssp             TTSBSHHHHHTSTTTEEEEESSSG
T ss_pred             ceeeeeeeeeccccceEEEeccch
Confidence               225678889999999988854

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.70  E-value=0.015  Score=49.41  Aligned_cols=99  Identities=17%  Similarity=0.216  Sum_probs=64.1

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCccH-H----HHHHcCCce--EEeCCChhHHHHhcCCc
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI-D----RVLAAGAEQ--AVDYSSKDIELAIKGKF  238 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G--~~Vi~~~~~~~~-~----~~~~~g~~~--v~~~~~~~~~~~~~~~~  238 (307)
                      ...++++|++||-+|  ++.|..+..+++..+  .+|+++..+++. +    .+++.+...  ++..+...... -.+.|
T Consensus        70 ~~l~~~~g~~VLdIG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~~-~~~~f  146 (212)
T PRK13942         70 ELLDLKEGMKVLEIG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGYE-ENAPY  146 (212)
T ss_pred             HHcCCCCcCEEEEEC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC-cCCCc
Confidence            466789999999999  457888888888765  489988655442 2    234445432  22222111000 11579


Q ss_pred             cEEEECCCChhhHHHHHhcccCCcEEEEecc
Q 021831          239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       239 dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      |+|+-..........+.+.|++||+++..-+
T Consensus       147 D~I~~~~~~~~~~~~l~~~LkpgG~lvi~~~  177 (212)
T PRK13942        147 DRIYVTAAGPDIPKPLIEQLKDGGIMVIPVG  177 (212)
T ss_pred             CEEEECCCcccchHHHHHhhCCCcEEEEEEc
Confidence            9987765555466778889999999887543

>PRK05875 short chain dehydrogenase; Provisional

Probab=96.68  E-value=0.061  Score=47.15  Aligned_cols=36  Identities=28%  Similarity=0.383  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK  209 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~  209 (307)
                      .+.++||.|++|.+|..+++.+...|++|+.+.++.
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~   41 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNP   41 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCH
Confidence            368999999999999999999999999999887654

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.68  E-value=0.048  Score=46.47  Aligned_cols=70  Identities=20%  Similarity=0.296  Sum_probs=45.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChh-HHHHhc--CCccEEEECCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD-IELAIK--GKFDAVLDTIG  246 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~--~~~dvvid~~g  246 (307)
                      .+.+++|.|+++.+|...+..+...|++|+.+.+......   .+....+..+-.+ +.+...  +++|++|++.|
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag   76 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL---SGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAG   76 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc---CCcEEEEECChHHHHHHHHHhhCCCCEEEECCC
Confidence            4678999999999999999988888999988866533211   0111122222112 222222  57899999987

>PRK06914 short chain dehydrogenase; Provisional

Probab=96.66  E-value=0.037  Score=48.67  Aligned_cols=73  Identities=18%  Similarity=0.264  Sum_probs=47.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCC---ceE--EeCCChh-HHH--Hh-c--CCc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGA---EQA--VDYSSKD-IEL--AI-K--GKF  238 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~---~~v--~~~~~~~-~~~--~~-~--~~~  238 (307)
                      +.++||+||+|.+|...+..+...|++|+++.++.+. ..    ....+.   .++  .|..+.. +..  .+ .  +++
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i   82 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI   82 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence            5689999999999999999988899999988765432 11    122221   122  2444432 222  11 1  578


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|.+.|.
T Consensus        83 d~vv~~ag~   91 (280)
T PRK06914         83 DLLVNNAGY   91 (280)
T ss_pred             eEEEECCcc
Confidence            999999874

>PRK06194 hypothetical protein; Provisional

Probab=96.66  E-value=0.052  Score=47.91  Aligned_cols=73  Identities=26%  Similarity=0.419  Sum_probs=47.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HH---HcCCc-eEE--eCCCh-hHHHHhc------CCcc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VL---AAGAE-QAV--DYSSK-DIELAIK------GKFD  239 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~---~~g~~-~v~--~~~~~-~~~~~~~------~~~d  239 (307)
                      +.++||+||+|.+|...++.+...|++|+.+.+..+ .+. ..   ..+.. .++  |..+. ++.+.+.      +++|
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id   85 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVH   85 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            678999999999999999988889999988866532 221 22   22322 122  33332 2222221      4689


Q ss_pred             EEEECCCC
Q 021831          240 AVLDTIGA  247 (307)
Q Consensus       240 vvid~~g~  247 (307)
                      ++|++.|.
T Consensus        86 ~vi~~Ag~   93 (287)
T PRK06194         86 LLFNNAGV   93 (287)
T ss_pred             EEEECCCC
Confidence            99999885

>PRK05650 short chain dehydrogenase; Provisional

Probab=96.66  E-value=0.048  Score=47.72  Aligned_cols=71  Identities=15%  Similarity=0.260  Sum_probs=46.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eEE--eCCCh-hHHHHhc------CCccEE
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QAV--DYSSK-DIELAIK------GKFDAV  241 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v~--~~~~~-~~~~~~~------~~~dvv  241 (307)
                      ++||+|++|++|+..++.+...|++|+.+.++... +.    ++..+.+ ..+  |..+. ++.+.+.      +++|++
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l   81 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI   81 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            68999999999999998888899999888765432 21    2223322 122  33332 2222221      479999


Q ss_pred             EECCCC
Q 021831          242 LDTIGA  247 (307)
Q Consensus       242 id~~g~  247 (307)
                      |.+.|.
T Consensus        82 I~~ag~   87 (270)
T PRK05650         82 VNNAGV   87 (270)
T ss_pred             EECCCC
Confidence            999884

>PRK09186 flagellin modification protein A; Provisional

Probab=96.65  E-value=0.044  Score=47.38  Aligned_cols=73  Identities=23%  Similarity=0.389  Sum_probs=48.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHc----CCc--e--EEeCCChh-HHHHhc------C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAA----GAE--Q--AVDYSSKD-IELAIK------G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~----g~~--~--v~~~~~~~-~~~~~~------~  236 (307)
                      .+.++||.|++|.+|...+..+...|++|+.+.++.+. +. ..++    +..  .  ..|..+.+ +.+.+.      +
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999888765432 21 2222    221  1  22444432 222222      4


Q ss_pred             CccEEEECCC
Q 021831          237 KFDAVLDTIG  246 (307)
Q Consensus       237 ~~dvvid~~g  246 (307)
                      ++|++|++.+
T Consensus        83 ~id~vi~~A~   92 (256)
T PRK09186         83 KIDGAVNCAY   92 (256)
T ss_pred             CccEEEECCc
Confidence            6899999985

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=96.63  E-value=0.013  Score=47.96  Aligned_cols=93  Identities=17%  Similarity=0.210  Sum_probs=62.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHH--HhcCCccEEEECCCChh-----
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL--AIKGKFDAVLDTIGAPE-----  249 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~--~~~~~~dvvid~~g~~~-----  249 (307)
                      +|.|+||+|.+|....+=|+.+|-.|++++++..+..++  ....++..+-.+...  ..-.++|+||++.|...     
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~~~   79 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDNDE   79 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--ccceeecccccChhhhHhhhcCCceEEEeccCCCCChhH
Confidence            688999999999999999999999999999887654332  111122222112222  22257999999987541     


Q ss_pred             ----hHHHHHhcccCC--cEEEEeccCc
Q 021831          250 ----TERLGLNFLKRG--GHYMTLHGET  271 (307)
Q Consensus       250 ----~~~~~~~~l~~~--G~~v~~g~~~  271 (307)
                          ....++..|+.-  -|++.+|+..
T Consensus        80 ~~~k~~~~li~~l~~agv~RllVVGGAG  107 (211)
T COG2910          80 LHSKSIEALIEALKGAGVPRLLVVGGAG  107 (211)
T ss_pred             HHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence                233466666653  4888888764

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.61  E-value=0.054  Score=46.35  Aligned_cols=73  Identities=25%  Similarity=0.386  Sum_probs=47.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eEE--eCCCh-hHHHHhc------CCcc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QAV--DYSSK-DIELAIK------GKFD  239 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v~--~~~~~-~~~~~~~------~~~d  239 (307)
                      +.+++|.|++|.+|...+..+...|++|+.+.++... +.    ++..+.. .++  |..+. ++.+.+.      +++|
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   86 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSID   86 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCcc
Confidence            5789999999999999999888899999988775432 11    2222321 122  23232 2222222      4789


Q ss_pred             EEEECCCC
Q 021831          240 AVLDTIGA  247 (307)
Q Consensus       240 vvid~~g~  247 (307)
                      ++|.+.|.
T Consensus        87 ~vi~~ag~   94 (239)
T PRK07666         87 ILINNAGI   94 (239)
T ss_pred             EEEEcCcc
Confidence            99999874

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.61  E-value=0.063  Score=45.82  Aligned_cols=74  Identities=26%  Similarity=0.396  Sum_probs=48.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eE--EeCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QA--VDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v--~~~~~~~-~~~~~~------~~~  238 (307)
                      ++.++||+|++|.+|...++.+...|.+|+.+.++... ..    ++..+.. ..  .|..+.. +...+.      +++
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL   83 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            35789999999999999999998899998888776432 11    2233332 12  2333322 222121      468


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |.+|.+.|.
T Consensus        84 d~vi~~ag~   92 (246)
T PRK05653         84 DILVNNAGI   92 (246)
T ss_pred             CEEEECCCc
Confidence            999999865

>PRK12744 short chain dehydrogenase; Provisional

Probab=96.60  E-value=0.077  Score=46.03  Aligned_cols=33  Identities=24%  Similarity=0.340  Sum_probs=28.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC  206 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~  206 (307)
                      .+.++||.|++|++|...++.+...|++|+.+.
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~   39 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIH   39 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEe
Confidence            467899999999999999999998999866664

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.59  E-value=0.008  Score=45.00  Aligned_cols=90  Identities=20%  Similarity=0.230  Sum_probs=57.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHH-HcCCEEEEEeCCcc-HHHHH----HcCC-c--eEEeCCChhHHHHhcCCccEEEEC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSV-ASGCHVSATCGSKS-IDRVL----AAGA-E--QAVDYSSKDIELAIKGKFDAVLDT  244 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~-~~G~~Vi~~~~~~~-~~~~~----~~g~-~--~v~~~~~~~~~~~~~~~~dvvid~  244 (307)
                      ||.+||-+|  .+.|..+..+++ ..+++|+++..+.. .+.++    +.+. +  .++..+. .......++||+|+..
T Consensus         1 p~~~vLDlG--cG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~-~~~~~~~~~~D~v~~~   77 (112)
T PF12847_consen    1 PGGRVLDLG--CGTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDA-EFDPDFLEPFDLVICS   77 (112)
T ss_dssp             TTCEEEEET--TTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCC-HGGTTTSSCEEEEEEC
T ss_pred             CCCEEEEEc--CcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECcc-ccCcccCCCCCEEEEC
Confidence            688999999  456888888988 57889999965543 33322    2232 2  2233222 1111122579999987


Q ss_pred             C-CCh---------hhHHHHHhcccCCcEEEE
Q 021831          245 I-GAP---------ETERLGLNFLKRGGHYMT  266 (307)
Q Consensus       245 ~-g~~---------~~~~~~~~~l~~~G~~v~  266 (307)
                      . ...         ..+..+.+.|+|||+++.
T Consensus        78 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi  109 (112)
T PF12847_consen   78 GFTLHFLLPLDERRRVLERIRRLLKPGGRLVI  109 (112)
T ss_dssp             SGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             CCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence            7 221         136788899999999986

...

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=96.58  E-value=0.056  Score=46.54  Aligned_cols=38  Identities=21%  Similarity=0.287  Sum_probs=33.1

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK  209 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~  209 (307)
                      ..++.+++|.|++|.+|...++.+...|++|+.+.+..
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~   46 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTE   46 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCH
Confidence            45788999999999999999988888899999887654

>PRK05599 hypothetical protein; Provisional

Probab=96.58  E-value=0.076  Score=45.89  Aligned_cols=129  Identities=12%  Similarity=0.130  Sum_probs=72.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc--eEE--eCCChh----HHHHhc---CCccE
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE--QAV--DYSSKD----IELAIK---GKFDA  240 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~--~v~--~~~~~~----~~~~~~---~~~dv  240 (307)
                      +++|.|+++++|.+.+.... .|.+|+.+.++.+ .+.    +++.+..  ..+  |..+.+    +.+.+.   +++|+
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   80 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL   80 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence            68999999999999887766 4999988876543 221    2333422  222  333322    222222   57999


Q ss_pred             EEECCCChhh--------------H-----------HHHHhccc-C--CcEEEEeccCcccccccccceechhHHHHHHH
Q 021831          241 VLDTIGAPET--------------E-----------RLGLNFLK-R--GGHYMTLHGETAALADHYGLALGLPIATTVLL  292 (307)
Q Consensus       241 vid~~g~~~~--------------~-----------~~~~~~l~-~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  292 (307)
                      +|++.|....              .           ..++..|. .  +|+++.++.............++....+...+
T Consensus        81 lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~  160 (246)
T PRK05599         81 AVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLDAF  160 (246)
T ss_pred             EEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHHHH
Confidence            9998874200              0           12223342 2  58999988765543333333444555555444


Q ss_pred             HHHHh-hhhcccccc
Q 021831          293 KKRMQ-TWYSYGIGC  306 (307)
Q Consensus       293 ~~~~~-~~~~~~i~~  306 (307)
                      -..+. .+..+||++
T Consensus       161 ~~~la~el~~~~I~v  175 (246)
T PRK05599        161 CQGLADSLHGSHVRL  175 (246)
T ss_pred             HHHHHHHhcCCCceE
Confidence            44443 445667765

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.57  E-value=0.028  Score=50.75  Aligned_cols=97  Identities=25%  Similarity=0.338  Sum_probs=66.0

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCcc-H----HHHHHcCCceEEeCCChhHHHHhc--CCc
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKS-I----DRVLAAGAEQAVDYSSKDIELAIK--GKF  238 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~~~~~~-~----~~~~~~g~~~v~~~~~~~~~~~~~--~~~  238 (307)
                      +...++++++||.+|+ | .|..++.+++..+.  +|+++..+++ .    +.++..|.+.+.... .+..+...  +.|
T Consensus        74 ~~L~i~~g~~VLDIG~-G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~-gD~~~~~~~~~~f  150 (322)
T PRK13943         74 EWVGLDKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC-GDGYYGVPEFAPY  150 (322)
T ss_pred             HhcCCCCCCEEEEEeC-C-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-CChhhcccccCCc
Confidence            3567889999999994 4 69999999988764  6888855543 2    224456665433222 22222222  469


Q ss_pred             cEEEECCCChhhHHHHHhcccCCcEEEEe
Q 021831          239 DAVLDTIGAPETERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       239 dvvid~~g~~~~~~~~~~~l~~~G~~v~~  267 (307)
                      |+|+.+.+.......+.+.|+++|+++..
T Consensus       151 D~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        151 DVIFVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             cEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence            99999988765566788899999998773

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.56  E-value=0.1  Score=44.59  Aligned_cols=74  Identities=30%  Similarity=0.431  Sum_probs=46.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--HHH----HHHcCCc-eEE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDR----VLAAGAE-QAV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--~~~----~~~~g~~-~v~--~~~~~~-~~~~~~------~~  237 (307)
                      .+.++||.|++|.+|...+..+...|++|+.+.+...  ...    ++..+.. ..+  |..+.+ +.+.+.      ++
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999999999999999999999999877755432  111    2222322 222  333332 222111      46


Q ss_pred             ccEEEECCCC
Q 021831          238 FDAVLDTIGA  247 (307)
Q Consensus       238 ~dvvid~~g~  247 (307)
                      +|.+|.+.|.
T Consensus        84 id~vi~~ag~   93 (248)
T PRK05557         84 VDILVNNAGI   93 (248)
T ss_pred             CCEEEECCCc
Confidence            8999999874

>PRK08703 short chain dehydrogenase; Provisional

Probab=96.56  E-value=0.065  Score=45.87  Aligned_cols=37  Identities=19%  Similarity=0.281  Sum_probs=32.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~  210 (307)
                      ++.+++|.|++|++|...++.+...|++|+.+.++..
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~   41 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQK   41 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChH
Confidence            4679999999999999999999889999988877653

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.56  E-value=0.013  Score=55.06  Aligned_cols=168  Identities=18%  Similarity=0.222  Sum_probs=97.8

Q ss_pred             ccccceEEEEEEecCCCCCCCCCCEEE-EecC------------CCCCCCcceeEEEecCCceeeCCCCCChhhhccccc
Q 021831           91 ILGRDISGEVAAVGASVRSLTVGQEVF-GALH------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPF  157 (307)
Q Consensus        91 ~~G~e~~G~V~~~G~~v~~~~~Gd~V~-~~~~------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~  157 (307)
                      .-|+|+++-+.+++++++..-.|+.=+ +.+.            +...++.|++.        +++|+.+..+.. ....
T Consensus        91 ~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a--------~~~~k~v~~~t~-i~~~  161 (423)
T PRK00045         91 HEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKA--------FSVAKRVRTETG-IGAG  161 (423)
T ss_pred             cCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHH--------HHHHhhHhhhcC-CCCC
Confidence            459999999999999987766666332 1110            00112333333        334443332222 2222


Q ss_pred             hHHHHHHHHHHHcC---CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCccH--HHHHHcCCceEEeCCChhHH
Q 021831          158 AALTAWRALKCAAR---MSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGAEQAVDYSSKDIE  231 (307)
Q Consensus       158 ~~~ta~~~l~~~~~---~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~  231 (307)
                      +...++.++.....   -.++++|+|+|+ |.+|+++++.++..|+ +|+...++.+.  ..+.++|.+ +++.  .++.
T Consensus       162 ~~Sv~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~--~~~~  237 (423)
T PRK00045        162 AVSVASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL--DELP  237 (423)
T ss_pred             CcCHHHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH--HHHH
Confidence            34455555542222   257899999995 9999999999999998 77777665432  346677753 3332  2333


Q ss_pred             HHhcCCccEEEECCCChhhHH---HHHhccc----CCcEEEEeccCcc
Q 021831          232 LAIKGKFDAVLDTIGAPETER---LGLNFLK----RGGHYMTLHGETA  272 (307)
Q Consensus       232 ~~~~~~~dvvid~~g~~~~~~---~~~~~l~----~~G~~v~~g~~~~  272 (307)
                      +.+ .++|+||+|+|.+..+-   .+-..++    ..-.++.++.|..
T Consensus       238 ~~l-~~aDvVI~aT~s~~~~i~~~~l~~~~~~~~~~~~vviDla~Prd  284 (423)
T PRK00045        238 EAL-AEADIVISSTGAPHPIIGKGMVERALKARRHRPLLLVDLAVPRD  284 (423)
T ss_pred             HHh-ccCCEEEECCCCCCcEEcHHHHHHHHhhccCCCeEEEEeCCCCC
Confidence            333 46999999999753321   1112221    2236888888765

>PRK07074 short chain dehydrogenase; Provisional

Probab=96.55  E-value=0.086  Score=45.64  Aligned_cols=73  Identities=25%  Similarity=0.267  Sum_probs=47.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H-HHHHcC--CceE--EeCCChh-HHHHhc------CCccEE
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAG--AEQA--VDYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~-~~~~~g--~~~v--~~~~~~~-~~~~~~------~~~dvv  241 (307)
                      +.++||+|++|.+|...+..+...|++|+.+.++... + ....+.  .-+.  .|..+.+ +...+.      +++|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4689999999999999998888889999888765432 2 223221  1122  2333322 222221      468999


Q ss_pred             EECCCC
Q 021831          242 LDTIGA  247 (307)
Q Consensus       242 id~~g~  247 (307)
                      |.+.|.
T Consensus        82 i~~ag~   87 (257)
T PRK07074         82 VANAGA   87 (257)
T ss_pred             EECCCC
Confidence            999874

>PLN02780 ketoreductase/ oxidoreductase

Probab=96.55  E-value=0.044  Score=49.59  Aligned_cols=37  Identities=16%  Similarity=0.138  Sum_probs=32.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~  210 (307)
                      .|.+++|+||++++|.+.+..+...|++|+.+.++.+
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~   88 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPD   88 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHH
Confidence            5899999999999999988888888999998877643

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=96.55  E-value=0.052  Score=48.01  Aligned_cols=132  Identities=15%  Similarity=0.193  Sum_probs=86.5

Q ss_pred             CCCCEEEEEcCCchHHHH-HHHHHHHcCCEEEEEeCCccH-HH-----HHHcCC---ceEEeCCChh-----HHHHhcC-
Q 021831          173 SEGQRLLVLGGGGAVGFA-AVQFSVASGCHVSATCGSKSI-DR-----VLAAGA---EQAVDYSSKD-----IELAIKG-  236 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~-~~~~a~~~G~~Vi~~~~~~~~-~~-----~~~~g~---~~v~~~~~~~-----~~~~~~~-  236 (307)
                      +-|+|.+|.||+.++|.+ +-++|+ +|.+|+.+.|++++ +.     .+..+.   ..++|+..++     +.+.+.+ 
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~  125 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAK-RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGL  125 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCC
Confidence            457999999999999977 555665 89999999888653 22     233332   3567777665     2333333 


Q ss_pred             CccEEEECCCChh----hH-----------------------HH-HHhcc-cCCcEEEEeccCcccccccccceechhHH
Q 021831          237 KFDAVLDTIGAPE----TE-----------------------RL-GLNFL-KRGGHYMTLHGETAALADHYGLALGLPIA  287 (307)
Q Consensus       237 ~~dvvid~~g~~~----~~-----------------------~~-~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  287 (307)
                      .+-+.+|++|-..    .+                       .. +-..+ +..|.++.+|...+..+...-..+.....
T Consensus       126 ~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~  205 (312)
T KOG1014|consen  126 DVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKA  205 (312)
T ss_pred             ceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHH
Confidence            5678899988521    11                       11 11122 35699999998877666666666666777


Q ss_pred             HHHHHHHHHhhhhc-cccc
Q 021831          288 TTVLLKKRMQTWYS-YGIG  305 (307)
Q Consensus       288 ~~~~~~~~~~~~~~-~~i~  305 (307)
                      ..+.+..++...++ +||.
T Consensus       206 ~v~~~S~~L~~Ey~~~gI~  224 (312)
T KOG1014|consen  206 FVDFFSRCLQKEYESKGIF  224 (312)
T ss_pred             HHHHHHHHHHHHHHhcCeE
Confidence            77778888776544 4554

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.53  E-value=0.098  Score=45.03  Aligned_cols=33  Identities=27%  Similarity=0.359  Sum_probs=29.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG  207 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~  207 (307)
                      +.++||+||+|.+|..++..+...|++|+...+
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~   37 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYH   37 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcC
Confidence            578999999999999999988889999887644

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=96.52  E-value=0.067  Score=43.96  Aligned_cols=95  Identities=20%  Similarity=0.264  Sum_probs=66.2

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCcc-H----HHHHHcCCc--eEEeCCChhHHHHhcCCccE
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKS-I----DRVLAAGAE--QAVDYSSKDIELAIKGKFDA  240 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~~~-~----~~~~~~g~~--~v~~~~~~~~~~~~~~~~dv  240 (307)
                      ...+++|+.++=+|+  ++|...+++++..- .+|+++.+.++ .    +.+++||.+  .++..+.++....+ ..+|.
T Consensus        29 ~L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~-~~~da  105 (187)
T COG2242          29 KLRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDL-PSPDA  105 (187)
T ss_pred             hhCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCC-CCCCE
Confidence            557889999998885  46888888885443 49999976544 2    336788876  44444444433322 26998


Q ss_pred             EEECCCC--hhhHHHHHhcccCCcEEEE
Q 021831          241 VLDTIGA--PETERLGLNFLKRGGHYMT  266 (307)
Q Consensus       241 vid~~g~--~~~~~~~~~~l~~~G~~v~  266 (307)
                      +|=.-|.  ...++.++..|+++|++|.
T Consensus       106 iFIGGg~~i~~ile~~~~~l~~ggrlV~  133 (187)
T COG2242         106 IFIGGGGNIEEILEAAWERLKPGGRLVA  133 (187)
T ss_pred             EEECCCCCHHHHHHHHHHHcCcCCeEEE
Confidence            8865543  3467889999999999998

>PRK08017 oxidoreductase; Provisional

Probab=96.51  E-value=0.086  Score=45.51  Aligned_cols=72  Identities=17%  Similarity=0.332  Sum_probs=48.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCceE-EeCCChh-H---HHHhc----CCccEEEECC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQA-VDYSSKD-I---ELAIK----GKFDAVLDTI  245 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~~v-~~~~~~~-~---~~~~~----~~~dvvid~~  245 (307)
                      +++||+|++|.+|+.+++.+...|++|+++.++.+ .+.+++.+...+ .|..+.+ .   .+.+.    +.+|.++.+.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~a   82 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNA   82 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence            57999999999999999999999999988876543 344555555322 3444322 1   12221    4678999887


Q ss_pred             CC
Q 021831          246 GA  247 (307)
Q Consensus       246 g~  247 (307)
                      |.
T Consensus        83 g~   84 (256)
T PRK08017         83 GF   84 (256)
T ss_pred             CC
Confidence            73

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=96.51  E-value=0.07  Score=49.14  Aligned_cols=33  Identities=18%  Similarity=0.342  Sum_probs=27.3

Q ss_pred             CCCCEEEEEcCCchHHHH--HHHHHHHcCCEEEEEe
Q 021831          173 SEGQRLLVLGGGGAVGFA--AVQFSVASGCHVSATC  206 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~--~~~~a~~~G~~Vi~~~  206 (307)
                      ..|.++||+|+++++|++  .++.+ ..|++++++.
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~   73 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVF   73 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEe
Confidence            456899999999999999  56666 8899887775

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.51  E-value=0.022  Score=48.07  Aligned_cols=98  Identities=19%  Similarity=0.127  Sum_probs=63.6

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCccH-H----HHHHcCCc---eEEeCCChhHHHHhcCC
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI-D----RVLAAGAE---QAVDYSSKDIELAIKGK  237 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G--~~Vi~~~~~~~~-~----~~~~~g~~---~v~~~~~~~~~~~~~~~  237 (307)
                      +...++++++||-.|  .+.|..+..+++..+  .+|+++..+++. +    .+...+..   .++..+..+.... .+.
T Consensus        66 ~~l~~~~~~~VLDiG--~GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~~-~~~  142 (205)
T PRK13944         66 ELIEPRPGMKILEVG--TGSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLEK-HAP  142 (205)
T ss_pred             HhcCCCCCCEEEEEC--cCccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCcc-CCC
Confidence            456778999999998  456888888887764  589988665442 2    23345532   2333222111111 257


Q ss_pred             ccEEEECCCChhhHHHHHhcccCCcEEEEec
Q 021831          238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       238 ~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g  268 (307)
                      ||+|+-+.........+.+.|++||+++..-
T Consensus       143 fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~~  173 (205)
T PRK13944        143 FDAIIVTAAASTIPSALVRQLKDGGVLVIPV  173 (205)
T ss_pred             ccEEEEccCcchhhHHHHHhcCcCcEEEEEE
Confidence            9999877665545677889999999997743

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.51  E-value=0.06  Score=43.35  Aligned_cols=92  Identities=21%  Similarity=0.245  Sum_probs=59.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhh
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET  250 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~-~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~  250 (307)
                      +-.|.+++|.| -|.+|.-+++.++.+|++|+++ .++-+.-.+..-|+. +.     ++.+.+ ...|++|.++|....
T Consensus        20 ~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~-v~-----~~~~a~-~~adi~vtaTG~~~v   91 (162)
T PF00670_consen   20 MLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFE-VM-----TLEEAL-RDADIFVTATGNKDV   91 (162)
T ss_dssp             --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-E-EE------HHHHT-TT-SEEEE-SSSSSS
T ss_pred             eeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcE-ec-----CHHHHH-hhCCEEEECCCCccc
Confidence            45799999999 7999999999999999999888 445444444455654 32     233333 568999999998743


Q ss_pred             -HHHHHhcccCCcEEEEeccCc
Q 021831          251 -ERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       251 -~~~~~~~l~~~G~~v~~g~~~  271 (307)
                       -..-+..|+++-.+..+|...
T Consensus        92 i~~e~~~~mkdgail~n~Gh~d  113 (162)
T PF00670_consen   92 ITGEHFRQMKDGAILANAGHFD  113 (162)
T ss_dssp             B-HHHHHHS-TTEEEEESSSST
T ss_pred             cCHHHHHHhcCCeEEeccCcCc
Confidence             345677788888888777653

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.47  E-value=0.041  Score=48.69  Aligned_cols=98  Identities=19%  Similarity=0.304  Sum_probs=70.0

Q ss_pred             ccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHH
Q 021831          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (307)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (307)
                      ...++........++...---.|.+|+|+|.+..+|.-++.++...|++|+...+..                  .++.+
T Consensus       136 ~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t------------------~~l~~  197 (286)
T PRK14175        136 TFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS------------------KDMAS  197 (286)
T ss_pred             CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc------------------hhHHH
Confidence            345666666666665332223699999999866799999999999999888764321                  12222


Q ss_pred             HhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       233 ~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .+ ..+|+||.++|.+..+..  ..++++..+|.+|...
T Consensus       198 ~~-~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~  233 (286)
T PRK14175        198 YL-KDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP  233 (286)
T ss_pred             HH-hhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence            22 458999999998854443  4689999999999875

>PRK06482 short chain dehydrogenase; Provisional

Probab=96.46  E-value=0.093  Score=46.03  Aligned_cols=72  Identities=21%  Similarity=0.361  Sum_probs=46.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHH-cCCc-e--EEeCCChh-HHHHhc------CCccEEEE
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLA-AGAE-Q--AVDYSSKD-IELAIK------GKFDAVLD  243 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~-~g~~-~--v~~~~~~~-~~~~~~------~~~dvvid  243 (307)
                      .++||+|++|.+|...++.+...|.+|+++.++.+ .+.+++ .+.. .  ..|..+.+ ..+.+.      +++|++|.
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS   82 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            57999999999999999988888999998877643 222322 2221 1  23333322 222111      56899999


Q ss_pred             CCCC
Q 021831          244 TIGA  247 (307)
Q Consensus       244 ~~g~  247 (307)
                      +.|.
T Consensus        83 ~ag~   86 (276)
T PRK06482         83 NAGY   86 (276)
T ss_pred             CCCC
Confidence            9874

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.41  E-value=0.038  Score=49.79  Aligned_cols=93  Identities=18%  Similarity=0.208  Sum_probs=59.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HHHHHcCCceEE-eCCChh-HHHHhcCCccEEEECCCChh----
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAV-DYSSKD-IELAIKGKFDAVLDTIGAPE----  249 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~~~~g~~~v~-~~~~~~-~~~~~~~~~dvvid~~g~~~----  249 (307)
                      +|+|+||+|-+|..++..+...|.+|.+++++.+. ..+...+.+.+. |..+.+ +.+.+ .++|+||++++...    
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al-~g~d~Vi~~~~~~~~~~~   80 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSF-KGVTAIIDASTSRPSDLY   80 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHH-CCCCEEEECCCCCCCCcc
Confidence            69999999999999999998899999999876432 223344543221 333333 33333 56999999876321    


Q ss_pred             --------hHHHHHhcccCCc--EEEEeccC
Q 021831          250 --------TERLGLNFLKRGG--HYMTLHGE  270 (307)
Q Consensus       250 --------~~~~~~~~l~~~G--~~v~~g~~  270 (307)
                              ....+++.++..|  ++|.++..
T Consensus        81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~  111 (317)
T CHL00194         81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSIL  111 (317)
T ss_pred             chhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence                    1123444444433  88888764

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=96.40  E-value=0.072  Score=45.49  Aligned_cols=32  Identities=41%  Similarity=0.622  Sum_probs=28.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCG  207 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~  207 (307)
                      .++||+|++|.+|...++.+...|++++++.+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r   32 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCG   32 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence            36899999999999999999999999988866

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=96.40  E-value=0.095  Score=45.45  Aligned_cols=74  Identities=23%  Similarity=0.347  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HHH----HHcCCc-eE--EeCCChh-HH---HHhc---CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV----LAAGAE-QA--VDYSSKD-IE---LAIK---GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~----~~~g~~-~v--~~~~~~~-~~---~~~~---~~~  238 (307)
                      .+.++||.|++|.+|..+++.+...|++|+.+.++... +.+    ...+.. ..  .|..+.+ +.   +.+.   +++
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i   90 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV   90 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999998899999888765432 221    222222 12  2444332 21   1111   478


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|.+.|.
T Consensus        91 d~vi~~ag~   99 (259)
T PRK08213         91 DILVNNAGA   99 (259)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK08264 short chain dehydrogenase; Validated

Probab=96.40  E-value=0.1  Score=44.53  Aligned_cols=72  Identities=21%  Similarity=0.312  Sum_probs=48.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCccHHHHHHcCCc-eE--EeCCCh-hHHHHhc--CCccEEEECCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSIDRVLAAGAE-QA--VDYSSK-DIELAIK--GKFDAVLDTIG  246 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~g~~-~v--~~~~~~-~~~~~~~--~~~dvvid~~g  246 (307)
                      .+.+++|+||+|.+|..+++.+...|+ +|+.+.++.+..  .+.+.. .+  .|..+. ++.+.+.  +.+|++|.+.|
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag   82 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESV--TDLGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAG   82 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhh--hhcCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            467899999999999999999999999 888887654322  112221 22  233332 2233222  46899999988


Q ss_pred             C
Q 021831          247 A  247 (307)
Q Consensus       247 ~  247 (307)
                      .
T Consensus        83 ~   83 (238)
T PRK08264         83 I   83 (238)
T ss_pred             c
Confidence            6

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=96.40  E-value=0.066  Score=41.48  Aligned_cols=89  Identities=17%  Similarity=0.213  Sum_probs=62.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCccH----HHHHHcCCceEEeCCChh---HHHHh--------------
Q 021831          178 LLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI----DRVLAAGAEQAVDYSSKD---IELAI--------------  234 (307)
Q Consensus       178 VlI~Ga~g~~G~~~~~~a~~~G--~~Vi~~~~~~~~----~~~~~~g~~~v~~~~~~~---~~~~~--------------  234 (307)
                      |.|.|++|.+|..+.++.+.+.  ++|++.+-..+.    ++++++....+.-.++..   +....              
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~   80 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE   80 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence            6799999999999999999887  688888544442    346788887777665432   22211              


Q ss_pred             ------c-CCccEEEECCCChhhHHHHHhcccCCcEEEE
Q 021831          235 ------K-GKFDAVLDTIGAPETERLGLNFLKRGGHYMT  266 (307)
Q Consensus       235 ------~-~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~  266 (307)
                            . ..+|+|+++.-+...+...+..++.|=++.+
T Consensus        81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL  119 (129)
T PF02670_consen   81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL  119 (129)
T ss_dssp             HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred             HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence                  1 4799999998887788888888887766554

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=96.39  E-value=0.024  Score=48.74  Aligned_cols=121  Identities=18%  Similarity=0.234  Sum_probs=76.4

Q ss_pred             chHHHHHHHHHHHcCCEEEEEeCCccH-----HH-HHHcCCceEEeCCC--hh-HHH---Hh---c-CCccEEEECCCCh
Q 021831          185 GAVGFAAVQFSVASGCHVSATCGSKSI-----DR-VLAAGAEQAVDYSS--KD-IEL---AI---K-GKFDAVLDTIGAP  248 (307)
Q Consensus       185 g~~G~~~~~~a~~~G~~Vi~~~~~~~~-----~~-~~~~g~~~v~~~~~--~~-~~~---~~---~-~~~dvvid~~g~~  248 (307)
                      +++|.++++.+.+.|++|+.+.++.+.     +. .++.+.. ++..+-  ++ ...   .+   . +++|+++++.|..
T Consensus         6 ~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~   84 (241)
T PF13561_consen    6 SGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGIS   84 (241)
T ss_dssp             SHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESC
T ss_pred             CChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcchHHHHHHHHHHHhhcCCCeEEEEeccccc
Confidence            899999999999999999999776543     22 3344543 554332  22 211   11   1 5789999876532


Q ss_pred             hh-----------------------------HHHHHhcccCCcEEEEeccCcccccccccceechhHHHHHHHHHHHh-h
Q 021831          249 ET-----------------------------ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ-T  298 (307)
Q Consensus       249 ~~-----------------------------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  298 (307)
                      ..                             ...+...++++|.++.++.............++.....+..+-+.+. .
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~lA~e  164 (241)
T PF13561_consen   85 PPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEGLTRSLAKE  164 (241)
T ss_dssp             TGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHHHHHHHHHH
Confidence            11                             24566678889999999876543333333345555555555555544 6


Q ss_pred             hhc-ccccc
Q 021831          299 WYS-YGIGC  306 (307)
Q Consensus       299 ~~~-~~i~~  306 (307)
                      +.+ +||++
T Consensus       165 l~~~~gIrV  173 (241)
T PF13561_consen  165 LAPKKGIRV  173 (241)
T ss_dssp             HGGHGTEEE
T ss_pred             hccccCeee
Confidence            677 79886

...

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=96.38  E-value=0.053  Score=48.14  Aligned_cols=147  Identities=18%  Similarity=0.198  Sum_probs=83.7

Q ss_pred             CCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHH--HHHHHHcCCCCCCEEEEEcCCc
Q 021831          108 RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAW--RALKCAARMSEGQRLLVLGGGG  185 (307)
Q Consensus       108 ~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~--~~l~~~~~~~~g~~VlI~Ga~g  185 (307)
                      ..++.|++.+..+       .|.++-.-.....+++.+++-|-    +.....|++  .++..  ..++|.+||=.|  .
T Consensus       107 ~P~rig~~f~I~P-------sw~~~~~~~~~~~i~lDPGlAFG----TG~HpTT~lcL~~Le~--~~~~g~~vlDvG--c  171 (300)
T COG2264         107 HPVRIGERFVIVP-------SWREYPEPSDELNIELDPGLAFG----TGTHPTTSLCLEALEK--LLKKGKTVLDVG--C  171 (300)
T ss_pred             CcEEeeeeEEECC-------CCccCCCCCCceEEEEccccccC----CCCChhHHHHHHHHHH--hhcCCCEEEEec--C
Confidence            4467788876663       35554322234567777776442    222222222  22322  345899999998  4


Q ss_pred             hHHHHHHHHHHHcCC-EEEEEe-CCccH----HHHHHcCCceEEeCCChhHHHHhc-CCccEEEECCCCh---hhHHHHH
Q 021831          186 AVGFAAVQFSVASGC-HVSATC-GSKSI----DRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAP---ETERLGL  255 (307)
Q Consensus       186 ~~G~~~~~~a~~~G~-~Vi~~~-~~~~~----~~~~~~g~~~v~~~~~~~~~~~~~-~~~dvvid~~g~~---~~~~~~~  255 (307)
                      +.|.+++..++. |+ +|+++. ++...    +.++..+................. +.||+|+-+.=..   .....+.
T Consensus       172 GSGILaIAa~kL-GA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~  250 (300)
T COG2264         172 GSGILAIAAAKL-GAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGFLLLEVPENGPFDVIVANILAEVLVELAPDIK  250 (300)
T ss_pred             ChhHHHHHHHHc-CCceEEEecCCHHHHHHHHHHHHHcCCchhhhcccccchhhcccCcccEEEehhhHHHHHHHHHHHH
Confidence            567777766554 88 788884 33332    234444443211111111222222 5899999876322   2457788


Q ss_pred             hcccCCcEEEEeccC
Q 021831          256 NFLKRGGHYMTLHGE  270 (307)
Q Consensus       256 ~~l~~~G~~v~~g~~  270 (307)
                      ..++|+|.+|+-|-.
T Consensus       251 ~~lkpgg~lIlSGIl  265 (300)
T COG2264         251 RLLKPGGRLILSGIL  265 (300)
T ss_pred             HHcCCCceEEEEeeh
Confidence            899999999998843

>PRK06123 short chain dehydrogenase; Provisional

Probab=96.38  E-value=0.13  Score=44.11  Aligned_cols=132  Identities=17%  Similarity=0.282  Sum_probs=72.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCcc-HH----HHHHcCCc-eE--EeCCCh-hHHHHhc------CCc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATC-GSKS-ID----RVLAAGAE-QA--VDYSSK-DIELAIK------GKF  238 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~-~~~~-~~----~~~~~g~~-~v--~~~~~~-~~~~~~~------~~~  238 (307)
                      +.++||.|++|.+|..+++.....|++|+... +... ..    .++..+.. ..  .|.++. .+.+.+.      +.+
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            45799999999999999988888899876654 3322 11    12333432 12  233332 2222221      578


Q ss_pred             cEEEECCCChh--------------------------hHHHHHhcccC-----CcEEEEeccCccccccccc-ceechhH
Q 021831          239 DAVLDTIGAPE--------------------------TERLGLNFLKR-----GGHYMTLHGETAALADHYG-LALGLPI  286 (307)
Q Consensus       239 dvvid~~g~~~--------------------------~~~~~~~~l~~-----~G~~v~~g~~~~~~~~~~~-~~~~~~~  286 (307)
                      |++|.+.|...                          .+..++..+..     .|+++.++........... ..++...
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASK  161 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHHH
Confidence            99999987421                          01223333321     4788888876543222221 2355555


Q ss_pred             HHHHHHHHHHhh-hhcccccc
Q 021831          287 ATTVLLKKRMQT-WYSYGIGC  306 (307)
Q Consensus       287 ~~~~~~~~~~~~-~~~~~i~~  306 (307)
                      .+.+.+-+.+.. +.+++|++
T Consensus       162 aa~~~~~~~la~~~~~~~i~v  182 (248)
T PRK06123        162 GAIDTMTIGLAKEVAAEGIRV  182 (248)
T ss_pred             HHHHHHHHHHHHHhcccCeEE
Confidence            555555444433 34456664

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.38  E-value=0.028  Score=48.75  Aligned_cols=74  Identities=20%  Similarity=0.348  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHcCCc-eEEeCCChh-HHHHhc------CCccEEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGAE-QAVDYSSKD-IELAIK------GKFDAVLD  243 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~g~~-~v~~~~~~~-~~~~~~------~~~dvvid  243 (307)
                      .|.+|||+||+|.+|...++.+...|++|+.+.+++.. +. ..+++.. ...|..+.+ +.+.+.      +++|++|.
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   85 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN   85 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            47899999999999999999999999999888765442 22 3344332 233544432 222121      47899999


Q ss_pred             CCCC
Q 021831          244 TIGA  247 (307)
Q Consensus       244 ~~g~  247 (307)
                      +.|.
T Consensus        86 ~ag~   89 (255)
T PRK06057         86 NAGI   89 (255)
T ss_pred             CCCc
Confidence            9874

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=96.37  E-value=0.14  Score=43.96  Aligned_cols=34  Identities=24%  Similarity=0.351  Sum_probs=29.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG  207 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~  207 (307)
                      .+.+++|.|++|.+|...+..+...|++|+...+
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~   38 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYN   38 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcC
Confidence            3789999999999999999988889998876643

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.34  E-value=0.07  Score=47.81  Aligned_cols=33  Identities=15%  Similarity=0.305  Sum_probs=29.1

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEe
Q 021831          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATC  206 (307)
Q Consensus       174 ~g~~VlI~Ga~--g~~G~~~~~~a~~~G~~Vi~~~  206 (307)
                      .|+++||+|++  +++|.+.+..+...|++|+...
T Consensus         7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~   41 (299)
T PRK06300          7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGT   41 (299)
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEe
Confidence            57899999985  8999999999999999988753

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=96.32  E-value=0.086  Score=43.91  Aligned_cols=98  Identities=21%  Similarity=0.136  Sum_probs=58.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHc----CCc-eEEeCCC-hhHHHHhcCCccEEEECC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAA----GAE-QAVDYSS-KDIELAIKGKFDAVLDTI  245 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~----g~~-~v~~~~~-~~~~~~~~~~~dvvid~~  245 (307)
                      .+.+++|+|++|.+|..++..+...|++|+.+.++.++ +. ...+    +.. ...+..+ +++.+.+ .++|+||.++
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~diVi~at  105 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAI-KGADVVFAAG  105 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHH-hcCCEEEECC
Confidence            57899999999999999888888889988887665432 11 2222    222 1122222 2233333 5689999998


Q ss_pred             CChhh-HHHHHhcccCCcEEEEeccCcc
Q 021831          246 GAPET-ERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       246 g~~~~-~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      +.... ........+++-.++.+..++.
T Consensus       106 ~~g~~~~~~~~~~~~~~~vv~D~~~~~~  133 (194)
T cd01078         106 AAGVELLEKLAWAPKPLAVAADVNAVPP  133 (194)
T ss_pred             CCCceechhhhcccCceeEEEEccCCCC
Confidence            76631 1111223334335677666653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK07775 short chain dehydrogenase; Provisional

Probab=96.31  E-value=0.12  Score=45.31  Aligned_cols=74  Identities=22%  Similarity=0.342  Sum_probs=47.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc-eEE--eCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE-QAV--DYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~-~v~--~~~~~~-~~~~~~------~~~  238 (307)
                      +..+++|+||+|.+|...++.+...|++|+.+.++.. ...    ....+.. +.+  |..+.. ....+.      ++.
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI   88 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            3468999999999999999988889999888866432 111    2223332 122  333322 221111      478


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|.+.|.
T Consensus        89 d~vi~~Ag~   97 (274)
T PRK07775         89 EVLVSGAGD   97 (274)
T ss_pred             CEEEECCCc
Confidence            999999875

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=96.31  E-value=0.096  Score=45.00  Aligned_cols=74  Identities=26%  Similarity=0.474  Sum_probs=48.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCC-ceEE--eCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGA-EQAV--DYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~-~~v~--~~~~~~-~~~~~~------~~~  238 (307)
                      ++.++||.||+|.+|..+++.+...|++|+.+.++... ..    +++.+. ..++  |..+.+ ..+.+.      +++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            46889999999999999999999999999888665432 11    222232 2222  333322 222221      468


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|.+.|.
T Consensus        82 d~vi~~ag~   90 (250)
T TIGR03206        82 DVLVNNAGW   90 (250)
T ss_pred             CEEEECCCC
Confidence            999999873

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.27  E-value=0.038  Score=46.48  Aligned_cols=90  Identities=12%  Similarity=0.124  Sum_probs=53.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHH--HHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhH
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSID--RVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE  251 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~--~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~  251 (307)
                      .|.+|||+|+ |.+|...++.+...|++|+++......+  .+...+.- .+...  .+.+..-.++|+||-++++. ..
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i-~~~~~--~~~~~~l~~adlViaaT~d~-el   83 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKI-RWKQK--EFEPSDIVDAFLVIAATNDP-RV   83 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCE-EEEec--CCChhhcCCceEEEEcCCCH-HH
Confidence            4789999996 9999999988888999888876543222  22222211 11111  11121125689999999998 44


Q ss_pred             HHHHhcccCCcEEEEec
Q 021831          252 RLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       252 ~~~~~~l~~~G~~v~~g  268 (307)
                      +..+......+.++.+.
T Consensus        84 N~~i~~~a~~~~lvn~~  100 (202)
T PRK06718         84 NEQVKEDLPENALFNVI  100 (202)
T ss_pred             HHHHHHHHHhCCcEEEC
Confidence            44444333334444443

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.25  E-value=0.14  Score=48.10  Aligned_cols=168  Identities=16%  Similarity=0.198  Sum_probs=98.5

Q ss_pred             ccccceEEEEEEecCCCCCCCCCCEEEE-ec------------CCCCCCCcceeEEEecCCce--eeC-CCCCChhhhcc
Q 021831           91 ILGRDISGEVAAVGASVRSLTVGQEVFG-AL------------HPTAVRGTYADYAVLSEDEL--TPK-PVSVTHADASA  154 (307)
Q Consensus        91 ~~G~e~~G~V~~~G~~v~~~~~Gd~V~~-~~------------~~~~~~g~~~~~~~~~~~~~--~~i-p~~~~~~~aa~  154 (307)
                      .-|.|+++-+.+++++++..-.|+.=+. .+            .+...++.|++++.++...-  ..+ +..++...   
T Consensus        89 ~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k~vr~~t~i~~~~vSv~~---  165 (417)
T TIGR01035        89 LTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGKRVRTETDISAGAVSISS---  165 (417)
T ss_pred             cCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhcCCCCCCcCHHH---
Confidence            4588999999999999877666664321 00            01123467778777765211  113 22222111   


Q ss_pred             ccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCccH--HHHHHcCCceEEeCCChhHH
Q 021831          155 IPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGAEQAVDYSSKDIE  231 (307)
Q Consensus       155 ~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~  231 (307)
                            .|...........++++|+|+|+ |.+|..+++.++..|+ +|+...++.+.  ..++.++.. .+..  .+..
T Consensus       166 ------~Av~la~~~~~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~--~~l~  235 (417)
T TIGR01035       166 ------AAVELAERIFGSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF--EDLE  235 (417)
T ss_pred             ------HHHHHHHHHhCCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH--HHHH
Confidence                  11111222334457899999995 9999999999999995 78777665432  345666653 2222  2333


Q ss_pred             HHhcCCccEEEECCCChhhH---HHHHhcccC--C-cEEEEeccCcc
Q 021831          232 LAIKGKFDAVLDTIGAPETE---RLGLNFLKR--G-GHYMTLHGETA  272 (307)
Q Consensus       232 ~~~~~~~dvvid~~g~~~~~---~~~~~~l~~--~-G~~v~~g~~~~  272 (307)
                      +.+ .++|+||+|++.+..+   ..+-..+..  . -.++.++.|..
T Consensus       236 ~~l-~~aDvVi~aT~s~~~ii~~e~l~~~~~~~~~~~~viDla~Prd  281 (417)
T TIGR01035       236 EYL-AEADIVISSTGAPHPIVSKEDVERALRERTRPLFIIDIAVPRD  281 (417)
T ss_pred             HHH-hhCCEEEECCCCCCceEcHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence            333 4699999999876432   112222221  1 26788888765

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.24  E-value=0.04  Score=44.38  Aligned_cols=125  Identities=10%  Similarity=-0.003  Sum_probs=68.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhHHH
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERL  253 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~~~  253 (307)
                      .|.+|+|.|+ |.+|..-++.+...|++|.++... ....+.+++... +..  ..+.+.--.++|+||-++++. ..+.
T Consensus        12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp~-~~~~l~~l~~i~-~~~--~~~~~~dl~~a~lViaaT~d~-e~N~   85 (157)
T PRK06719         12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSPE-ICKEMKELPYIT-WKQ--KTFSNDDIKDAHLIYAATNQH-AVNM   85 (157)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCc-cCHHHHhccCcE-EEe--cccChhcCCCceEEEECCCCH-HHHH
Confidence            4789999996 999999888888899988877432 222333443211 111  122221125699999999988 4454


Q ss_pred             HHhcc-cCCcEEEEeccCcc-----------cccccccceechhHHHHHHHHHHHhhhhcccc
Q 021831          254 GLNFL-KRGGHYMTLHGETA-----------ALADHYGLALGLPIATTVLLKKRMQTWYSYGI  304 (307)
Q Consensus       254 ~~~~l-~~~G~~v~~g~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  304 (307)
                      .+... +.++-+..+..+..           ......-.+.|..+.....++..++...++.+
T Consensus        86 ~i~~~a~~~~~vn~~d~~~~~~f~~pa~v~~~~l~iaisT~G~sP~la~~lr~~ie~~l~~~~  148 (157)
T PRK06719         86 MVKQAAHDFQWVNVVSDGTESSFHTPGVIRNDEYVVTISTSGKDPSFTKRLKQELTSILPKLI  148 (157)
T ss_pred             HHHHHHHHCCcEEECCCCCcCcEEeeeEEEECCeEEEEECCCcChHHHHHHHHHHHHHhhHHH
Confidence            44434 33333332222221           11111111234455666666666665555443

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.24  E-value=0.038  Score=46.90  Aligned_cols=100  Identities=18%  Similarity=0.223  Sum_probs=63.0

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCcc-HH----HHHHcCCce--EEeCCChhHHHHhcCCc
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKS-ID----RVLAAGAEQ--AVDYSSKDIELAIKGKF  238 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~~~~~~-~~----~~~~~g~~~--v~~~~~~~~~~~~~~~~  238 (307)
                      +...++++++||-+|  ++.|..++.+++..+.  +|+++...++ .+    .+++.+.+.  ++..+..+... ....|
T Consensus        71 ~~l~~~~~~~VLDiG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~~-~~~~f  147 (215)
T TIGR00080        71 ELLELKPGMKVLEIG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGWE-PLAPY  147 (215)
T ss_pred             HHhCCCCcCEEEEEC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCCc-ccCCC
Confidence            466789999999998  4578888888887653  6888855443 22    244555432  22222111100 11479


Q ss_pred             cEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       239 dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      |+|+-..........+.+.|++||+++..-+.
T Consensus       148 D~Ii~~~~~~~~~~~~~~~L~~gG~lv~~~~~  179 (215)
T TIGR00080       148 DRIYVTAAGPKIPEALIDQLKEGGILVMPVGE  179 (215)
T ss_pred             CEEEEcCCcccccHHHHHhcCcCcEEEEEEcC
Confidence            98886554444556788999999998775543

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=96.23  E-value=0.031  Score=52.18  Aligned_cols=74  Identities=16%  Similarity=0.194  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHcCC-ceE--EeCCChhHHHHhcCCccEEEECCCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGA-EQA--VDYSSKDIELAIKGKFDAVLDTIGA  247 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~g~-~~v--~~~~~~~~~~~~~~~~dvvid~~g~  247 (307)
                      .|.+++|.||+|++|.+.++.+...|++|+.+.+..+. .. ....+. ...  .|.++.+-.....+++|++|++.|.
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi  255 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI  255 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence            47899999999999999999888899999988765432 11 111111 112  3444433222223679999998874

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.22  E-value=0.12  Score=39.08  Aligned_cols=98  Identities=16%  Similarity=0.087  Sum_probs=62.6

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCcc-HHH----HHHcCCc--eEEeCCChhHHHHhcCCccE
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKS-IDR----VLAAGAE--QAVDYSSKDIELAIKGKFDA  240 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~~~-~~~----~~~~g~~--~v~~~~~~~~~~~~~~~~dv  240 (307)
                      ...+.++++|+-+|. | .|..+..+++..+ .+|+++..++. .+.    ++.++..  .++..+.........+.||+
T Consensus        14 ~~~~~~~~~vldlG~-G-~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   91 (124)
T TIGR02469        14 KLRLRPGDVLWDIGA-G-SGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPDR   91 (124)
T ss_pred             HcCCCCCCEEEEeCC-C-CCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCCE
Confidence            456677889999994 4 4999999998875 58888865543 222    3344433  22222211111122257999


Q ss_pred             EEECCCC---hhhHHHHHhcccCCcEEEEec
Q 021831          241 VLDTIGA---PETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       241 vid~~g~---~~~~~~~~~~l~~~G~~v~~g  268 (307)
                      |+...+.   ...+..+.+.|+++|+++...
T Consensus        92 v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~  122 (124)
T TIGR02469        92 VFIGGSGGLLQEILEAIWRRLRPGGRIVLNA  122 (124)
T ss_pred             EEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence            9976543   236788999999999998753

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>TIGR02415 23BDH acetoin reductases

Probab=96.21  E-value=0.16  Score=43.76  Aligned_cols=71  Identities=28%  Similarity=0.397  Sum_probs=46.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H-H---HHHcCCc-eE--EeCCChh-HHHHhc------CCccEE
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-R---VLAAGAE-QA--VDYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~-~---~~~~g~~-~v--~~~~~~~-~~~~~~------~~~dvv  241 (307)
                      +++|.|++|.+|...++.+...|++|+.+.++.+. . .   ++..+.. ..  .|..+.+ ..+.+.      +..|++
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v   81 (254)
T TIGR02415         2 VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVM   81 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            68999999999999999999999999888765432 1 1   2233322 12  2333332 222111      468999


Q ss_pred             EECCCC
Q 021831          242 LDTIGA  247 (307)
Q Consensus       242 id~~g~  247 (307)
                      |.+.|.
T Consensus        82 i~~ag~   87 (254)
T TIGR02415        82 VNNAGV   87 (254)
T ss_pred             EECCCc
Confidence            999874

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06940 short chain dehydrogenase; Provisional

Probab=96.18  E-value=0.14  Score=45.16  Aligned_cols=95  Identities=19%  Similarity=0.304  Sum_probs=56.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc-eE--EeCCChh-HH---HHhc--CCccE
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE-QA--VDYSSKD-IE---LAIK--GKFDA  240 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~-~v--~~~~~~~-~~---~~~~--~~~dv  240 (307)
                      +..++|.|+ |++|..+++.+. .|++|+.+.+... .+.    ++..+.+ ..  .|..+.+ ..   +.+.  +++|+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~   79 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG   79 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence            357899997 799999988875 7999998876533 221    2222322 12  3444432 22   2222  57999


Q ss_pred             EEECCCChh---h---------------HHHHHhcccCCcEEEEeccCc
Q 021831          241 VLDTIGAPE---T---------------ERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       241 vid~~g~~~---~---------------~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +|++.|...   .               +..++..++.+|+++.++...
T Consensus        80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~  128 (275)
T PRK06940         80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS  128 (275)
T ss_pred             EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence            999988421   1               233445556677777766543

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=96.16  E-value=0.14  Score=43.99  Aligned_cols=74  Identities=27%  Similarity=0.346  Sum_probs=48.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H-H---HHHcCCc-eEE--eCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-R---VLAAGAE-QAV--DYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~-~---~~~~g~~-~v~--~~~~~~-~~~~~~------~~~  238 (307)
                      .+.++||+||+|.+|...+..+...|++|+++.++... . .   +...+.. .++  |..+.+ +.+.+.      +.+
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   84 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL   84 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            46789999999999999999888889999998776331 1 1   2222321 222  333322 222121      478


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|.+.|.
T Consensus        85 d~vi~~ag~   93 (251)
T PRK12826         85 DILVANAGI   93 (251)
T ss_pred             CEEEECCCC
Confidence            999999864

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.14  E-value=0.11  Score=44.39  Aligned_cols=73  Identities=26%  Similarity=0.451  Sum_probs=45.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCccH-HH----HHHcCCc-eEE--eCCChh-HHHHhc------CCc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKSI-DR----VLAAGAE-QAV--DYSSKD-IELAIK------GKF  238 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~-~~~~~~-~~----~~~~g~~-~v~--~~~~~~-~~~~~~------~~~  238 (307)
                      +.++||.|++|.+|...+..+...|++|+.+ .++.+. ..    +...+.. .++  |..+.+ +.+.+.      +++
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI   84 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            5689999999999999998888889998887 655332 11    1222221 222  333322 222111      479


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|.+.|.
T Consensus        85 d~vi~~ag~   93 (247)
T PRK05565         85 DILVNNAGI   93 (247)
T ss_pred             CEEEECCCc
Confidence            999998874

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=96.13  E-value=0.15  Score=43.51  Aligned_cols=34  Identities=29%  Similarity=0.239  Sum_probs=29.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK  209 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~  209 (307)
                      .++||.|++|.+|..+++.+...|++|+.+.++.
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~   36 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSG   36 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCc
Confidence            4799999999999999998888899999987653

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.12  E-value=0.047  Score=46.08  Aligned_cols=90  Identities=18%  Similarity=0.237  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--HHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhH
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE  251 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~  251 (307)
                      .|.+|||+|+ |.+|..-++.+...|++|+++.....  ...+.+.+.-..+. .+..  .....++|+||-++++...-
T Consensus         8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~-~~~~--~~dl~~~~lVi~at~d~~ln   83 (205)
T TIGR01470         8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLA-RCFD--ADILEGAFLVIAATDDEELN   83 (205)
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEe-CCCC--HHHhCCcEEEEECCCCHHHH
Confidence            4789999995 99999999999999999988865433  22333334222221 1111  11125699999999997443


Q ss_pred             HHHHhcccCCcEEEEe
Q 021831          252 RLGLNFLKRGGHYMTL  267 (307)
Q Consensus       252 ~~~~~~l~~~G~~v~~  267 (307)
                      ..+....+..|..+.+
T Consensus        84 ~~i~~~a~~~~ilvn~   99 (205)
T TIGR01470        84 RRVAHAARARGVPVNV   99 (205)
T ss_pred             HHHHHHHHHcCCEEEE
Confidence            4444444555655543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.10  E-value=0.18  Score=47.28  Aligned_cols=120  Identities=11%  Similarity=0.021  Sum_probs=70.1

Q ss_pred             HHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCccH--HHHHHcCCceEEeCCChhHHHHhcCCccE
Q 021831          164 RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDA  240 (307)
Q Consensus       164 ~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~~~~~~dv  240 (307)
                      ........--.+.+++|+|+ |.+|.+++..+...|+ +++.+.++.+.  ..+.+++...+..+  +++.+.+ ..+|+
T Consensus       170 ~la~~~~~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~--~~l~~~l-~~aDi  245 (414)
T PRK13940        170 TLAKRQLDNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL--SELPQLI-KKADI  245 (414)
T ss_pred             HHHHHHhcCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH--HHHHHHh-ccCCE
Confidence            33333333346789999995 9999999999999998 66666666432  33455542223222  1222222 46999


Q ss_pred             EEECCCChhhHHHHHhcccC-CcEEEEeccCccccc---ccccceechhHHH
Q 021831          241 VLDTIGAPETERLGLNFLKR-GGHYMTLHGETAALA---DHYGLALGLPIAT  288 (307)
Q Consensus       241 vid~~g~~~~~~~~~~~l~~-~G~~v~~g~~~~~~~---~~~~~~~~~~~~~  288 (307)
                      ||+|++.+..+-. ...++. .=.+++++.|....+   ...++.+......
T Consensus       246 VI~aT~a~~~vi~-~~~~~~~~~~~iDLavPRdidp~v~~l~~v~l~~iDdl  296 (414)
T PRK13940        246 IIAAVNVLEYIVT-CKYVGDKPRVFIDISIPQALDPKLGELEQNVYYCVDDI  296 (414)
T ss_pred             EEECcCCCCeeEC-HHHhCCCCeEEEEeCCCCCCCccccCcCCeEEEeHHHH
Confidence            9999998743211 111221 125799999976333   3345555444443

>PRK12827 short chain dehydrogenase; Provisional

Probab=96.10  E-value=0.19  Score=43.08  Aligned_cols=34  Identities=29%  Similarity=0.402  Sum_probs=29.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG  207 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~  207 (307)
                      .+.++||.||+|.+|+..+..+...|++|+.+.+
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~   38 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDI   38 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcC
Confidence            3578999999999999999988889999887643

>PRK09134 short chain dehydrogenase; Provisional

Probab=96.10  E-value=0.24  Score=42.93  Aligned_cols=74  Identities=18%  Similarity=0.240  Sum_probs=46.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc--cHHH-H---HHcCCc-eE--EeCCChh-HHHHh---c---CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK--SIDR-V---LAAGAE-QA--VDYSSKD-IELAI---K---GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~--~~~~-~---~~~g~~-~v--~~~~~~~-~~~~~---~---~~  237 (307)
                      .+.++||.||+|.+|..+++.+...|++|+.+.+..  ..+. .   +..+.. +.  .|.++.+ ..+.+   .   ++
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   87 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP   87 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            467899999999999999998888999887765432  2221 1   222332 12  2444322 22211   1   56


Q ss_pred             ccEEEECCCC
Q 021831          238 FDAVLDTIGA  247 (307)
Q Consensus       238 ~dvvid~~g~  247 (307)
                      +|++|.+.|.
T Consensus        88 iD~vi~~ag~   97 (258)
T PRK09134         88 ITLLVNNASL   97 (258)
T ss_pred             CCEEEECCcC
Confidence            8999999874

>PRK07201 short chain dehydrogenase; Provisional

Probab=96.09  E-value=0.096  Score=52.07  Aligned_cols=73  Identities=22%  Similarity=0.407  Sum_probs=48.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eE--EeCCChh-HHHHhc------CCcc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QA--VDYSSKD-IELAIK------GKFD  239 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v--~~~~~~~-~~~~~~------~~~d  239 (307)
                      |.+++|.||+|++|..++..+...|++|+.+.++... +.    +...+.. .+  .|..+.+ ..+.+.      +++|
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id  450 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVD  450 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            6789999999999999999888889999998775432 11    1222322 12  2444332 222221      5799


Q ss_pred             EEEECCCC
Q 021831          240 AVLDTIGA  247 (307)
Q Consensus       240 vvid~~g~  247 (307)
                      ++|++.|.
T Consensus       451 ~li~~Ag~  458 (657)
T PRK07201        451 YLVNNAGR  458 (657)
T ss_pred             EEEECCCC
Confidence            99999884

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.08  E-value=0.1  Score=42.36  Aligned_cols=130  Identities=16%  Similarity=0.160  Sum_probs=80.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCc----eEEeCCChhHHHH---hc--CCccEEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAE----QAVDYSSKDIELA---IK--GKFDAVLD  243 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~----~v~~~~~~~~~~~---~~--~~~dvvid  243 (307)
                      .|..|++.|+.-++|...++-+...|++|+++.+.+. +..+-++-..    -+.|.+.  |...   +.  ...|..++
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~--wea~~~~l~~v~pidgLVN   83 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSA--WEALFKLLVPVFPIDGLVN   83 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccH--HHHHHHhhcccCchhhhhc
Confidence            5788999999999999999999999999999988754 3444333322    1223322  2221   11  23455555


Q ss_pred             CCCChh----------h-------------------HHHHHhcccCCcEEEEeccCcccccccccceechhHHHHHHHHH
Q 021831          244 TIGAPE----------T-------------------ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKK  294 (307)
Q Consensus       244 ~~g~~~----------~-------------------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (307)
                      ..|-..          .                   ...++....+ |-++-++.....+.-.....++....+++++.+
T Consensus        84 NAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~-GaIVNvSSqas~R~~~nHtvYcatKaALDmlTk  162 (245)
T KOG1207|consen   84 NAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIK-GAIVNVSSQASIRPLDNHTVYCATKAALDMLTK  162 (245)
T ss_pred             cchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCC-ceEEEecchhcccccCCceEEeecHHHHHHHHH
Confidence            544210          0                   0112222223 558888776655555556667888899999999


Q ss_pred             HHh-hhhcccccc
Q 021831          295 RMQ-TWYSYGIGC  306 (307)
Q Consensus       295 ~~~-~~~~~~i~~  306 (307)
                      ++. ...++.|++
T Consensus       163 ~lAlELGp~kIRV  175 (245)
T KOG1207|consen  163 CLALELGPQKIRV  175 (245)
T ss_pred             HHHHhhCcceeEe
Confidence            987 456777764

>PRK07069 short chain dehydrogenase; Validated

Probab=96.08  E-value=0.16  Score=43.67  Aligned_cols=32  Identities=25%  Similarity=0.303  Sum_probs=28.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~  208 (307)
                      +++|.|++|.+|...++.+...|++|+.+.++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~   32 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDIN   32 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence            37999999999999999988899999888765

>PRK09135 pteridine reductase; Provisional

Probab=96.05  E-value=0.24  Score=42.37  Aligned_cols=35  Identities=23%  Similarity=0.313  Sum_probs=31.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~  208 (307)
                      .+.++||+|++|.+|..+++.+...|++|+.+.++
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~   39 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHR   39 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence            45789999999999999999888899999998765

>PRK07102 short chain dehydrogenase; Provisional

Probab=96.03  E-value=0.25  Score=42.37  Aligned_cols=35  Identities=14%  Similarity=0.305  Sum_probs=30.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~  210 (307)
                      .+++|.||+|.+|...++.+...|++|+.+.+...
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~   36 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVE   36 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence            47999999999999999999889999998876543

>PRK12746 short chain dehydrogenase; Provisional

Probab=96.03  E-value=0.29  Score=42.20  Aligned_cols=35  Identities=23%  Similarity=0.282  Sum_probs=29.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGS  208 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~-~~~  208 (307)
                      .+.+++|.|++|.+|...++.+...|++|+.. .++
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~   40 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRN   40 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC
Confidence            35789999999999999999988889988765 444

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=96.03  E-value=0.15  Score=43.65  Aligned_cols=72  Identities=22%  Similarity=0.319  Sum_probs=45.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCccH-H-H---HHHcCCc-eE--EeCCChh-HHH---Hhc---CCcc
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKSI-D-R---VLAAGAE-QA--VDYSSKD-IEL---AIK---GKFD  239 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~-~~~~~~-~-~---~~~~g~~-~v--~~~~~~~-~~~---~~~---~~~d  239 (307)
                      .++||+|++|.+|...++.+...|++|+.+ .++.+. . .   ++..+.. +.  .|..+.+ ..+   .+.   +++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            379999999999999999888899998765 333221 1 1   2233321 22  3444332 222   221   5789


Q ss_pred             EEEECCCC
Q 021831          240 AVLDTIGA  247 (307)
Q Consensus       240 vvid~~g~  247 (307)
                      ++|.+.|.
T Consensus        82 ~vi~~ag~   89 (247)
T PRK09730         82 ALVNNAGI   89 (247)
T ss_pred             EEEECCCC
Confidence            99999885

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=96.03  E-value=0.081  Score=45.56  Aligned_cols=101  Identities=22%  Similarity=0.236  Sum_probs=73.0

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEE-eCCccHHH----HHHcCCceEEeCCChhHHHHhc-CCcc
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSAT-CGSKSIDR----VLAAGAEQAVDYSSKDIELAIK-GKFD  239 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~-~~~~~~~~----~~~~g~~~v~~~~~~~~~~~~~-~~~d  239 (307)
                      ...++.||++|+=.|  .+.|-+++-+|+..|-  +|++. .+.+..+.    +++++....+.....|..+.+. ..||
T Consensus        88 ~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~~~~~~~~vD  165 (256)
T COG2519          88 ARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDVREGIDEEDVD  165 (256)
T ss_pred             HHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEeccccccccccccC
Confidence            367899999999887  4578888899987775  88888 55555433    4556665534444345444443 3799


Q ss_pred             EEEECCCCh-hhHHHHHhcccCCcEEEEeccC
Q 021831          240 AVLDTIGAP-ETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       240 vvid~~g~~-~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      .+|==.+.+ ..++++.+.|++||.++.+...
T Consensus       166 av~LDmp~PW~~le~~~~~Lkpgg~~~~y~P~  197 (256)
T COG2519         166 AVFLDLPDPWNVLEHVSDALKPGGVVVVYSPT  197 (256)
T ss_pred             EEEEcCCChHHHHHHHHHHhCCCcEEEEEcCC
Confidence            887766664 6889999999999999998764

>PRK07041 short chain dehydrogenase; Provisional

Probab=95.98  E-value=0.12  Score=43.80  Aligned_cols=69  Identities=28%  Similarity=0.425  Sum_probs=44.5

Q ss_pred             EEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHc--CC-ceEE--eCCCh-hHHHHhc--CCccEEEECCCC
Q 021831          179 LVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAA--GA-EQAV--DYSSK-DIELAIK--GKFDAVLDTIGA  247 (307)
Q Consensus       179 lI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~--g~-~~v~--~~~~~-~~~~~~~--~~~dvvid~~g~  247 (307)
                      ||+||+|.+|...++.+...|++|+.+.++... .. ...+  +. .+++  |..+. ++.+.+.  +++|++|++.|.
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~   79 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAAD   79 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence            589999999999999888899999888775332 22 2222  22 2222  33333 2333222  568999999874

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=95.97  E-value=0.038  Score=42.34  Aligned_cols=90  Identities=20%  Similarity=0.247  Sum_probs=56.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCcc---HHHHHHcC----C-ceEEeCCChhHHHHhcCCccEEEECCCC
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKS---IDRVLAAG----A-EQAVDYSSKDIELAIKGKFDAVLDTIGA  247 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~~~---~~~~~~~g----~-~~v~~~~~~~~~~~~~~~~dvvid~~g~  247 (307)
                      +|.|+||+|.+|...++++..+- ++++.+.+++.   +.......    . +..+..  .+... + ..+|+||.|++.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~-~-~~~Dvvf~a~~~   76 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--ADPEE-L-SDVDVVFLALPH   76 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TSGHH-H-TTESEEEE-SCH
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cchhH-h-hcCCEEEecCch
Confidence            58999999999999999988764 46666543332   22222221    1 111211  11111 1 569999999999


Q ss_pred             hhhHHHHHhcccCCcEEEEeccC
Q 021831          248 PETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       248 ~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ......+-.+++.|=++|..+..
T Consensus        77 ~~~~~~~~~~~~~g~~ViD~s~~   99 (121)
T PF01118_consen   77 GASKELAPKLLKAGIKVIDLSGD   99 (121)
T ss_dssp             HHHHHHHHHHHHTTSEEEESSST
T ss_pred             hHHHHHHHHHhhCCcEEEeCCHH
Confidence            86666666667788889998875

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.97  E-value=0.29  Score=41.71  Aligned_cols=73  Identities=29%  Similarity=0.397  Sum_probs=46.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HH----HHHcCCc-eE--EeCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR----VLAAGAE-QA--VDYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~----~~~~g~~-~v--~~~~~~~-~~~~~~------~~  237 (307)
                      +..++||.||+|.+|..+++.+...|.+|+.+.+....  +.    ....+.. +.  .|..+.+ +.+.+.      ++
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   84 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence            35689999999999999999999999988776554331  11    2222322 22  2333322 222221      47


Q ss_pred             ccEEEECCC
Q 021831          238 FDAVLDTIG  246 (307)
Q Consensus       238 ~dvvid~~g  246 (307)
                      +|++|.+.|
T Consensus        85 id~vi~~ag   93 (249)
T PRK12825         85 IDILVNNAG   93 (249)
T ss_pred             CCEEEECCc
Confidence            899999987

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=95.95  E-value=0.09  Score=45.57  Aligned_cols=98  Identities=17%  Similarity=0.179  Sum_probs=61.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHH-HHHc--CCc-eEEeCCC--hhHHHHhcCCccEEEECCCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR-VLAA--GAE-QAVDYSS--KDIELAIKGKFDAVLDTIGA  247 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~-~~~~--g~~-~v~~~~~--~~~~~~~~~~~dvvid~~g~  247 (307)
                      .+.+|||+||+|.+|..+++.+...|.+|+++.+..+... ....  +.. ...|..+  .++.+.+..++|+||.+.|.
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~   95 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGF   95 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCC
Confidence            4679999999999999999988888999998877643221 1111  122 1134433  23444442479999998774


Q ss_pred             hh-------------hHHHHHhcccC--CcEEEEeccCc
Q 021831          248 PE-------------TERLGLNFLKR--GGHYMTLHGET  271 (307)
Q Consensus       248 ~~-------------~~~~~~~~l~~--~G~~v~~g~~~  271 (307)
                      ..             ....+++.+..  .+++|.++...
T Consensus        96 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~  134 (251)
T PLN00141         96 RRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSIL  134 (251)
T ss_pred             CcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcccc
Confidence            21             12344444443  36898888653

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=95.94  E-value=0.055  Score=49.89  Aligned_cols=95  Identities=21%  Similarity=0.224  Sum_probs=65.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCcc-HHHHHHcC--C--ceEEeCCCh-hHHHHhcCCccEEEECCCCh
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKS-IDRVLAAG--A--EQAVDYSSK-DIELAIKGKFDAVLDTIGAP  248 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~~~-~~~~~~~g--~--~~v~~~~~~-~~~~~~~~~~dvvid~~g~~  248 (307)
                      .+|||+|+ |.+|+.+++.+.+.| .+|+..+++.+ .+.+....  .  ...+|-.+. ...+.+ .++|+||++.+..
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li-~~~d~VIn~~p~~   79 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALI-KDFDLVINAAPPF   79 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHH-hcCCEEEEeCCch
Confidence            47999996 999999999988888 69999988844 44444332  1  244555444 333444 5579999999987


Q ss_pred             hhHHHHHhcccCCcEEEEeccCcc
Q 021831          249 ETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       249 ~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      .....+-.|++.|=.+++......
T Consensus        80 ~~~~i~ka~i~~gv~yvDts~~~~  103 (389)
T COG1748          80 VDLTILKACIKTGVDYVDTSYYEE  103 (389)
T ss_pred             hhHHHHHHHHHhCCCEEEcccCCc
Confidence            555444456677777777775543

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=95.94  E-value=0.02  Score=50.98  Aligned_cols=146  Identities=19%  Similarity=0.232  Sum_probs=78.0

Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHH
Q 021831          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG  188 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G  188 (307)
                      .+++|++.+..       ..|.++-.-+...++.+.+++.|-..---  +.......+...  .++|++||=.|  .+.|
T Consensus       107 P~~vg~~~~I~-------P~w~~~~~~~~~~~I~idPg~AFGTG~H~--TT~lcl~~l~~~--~~~g~~vLDvG--~GSG  173 (295)
T PF06325_consen  107 PIRVGDRLVIV-------PSWEEYPEPPDEIVIEIDPGMAFGTGHHP--TTRLCLELLEKY--VKPGKRVLDVG--CGSG  173 (295)
T ss_dssp             -EEECTTEEEE-------ETT----SSTTSEEEEESTTSSS-SSHCH--HHHHHHHHHHHH--SSTTSEEEEES---TTS
T ss_pred             cEEECCcEEEE-------CCCcccCCCCCcEEEEECCCCcccCCCCH--HHHHHHHHHHHh--ccCCCEEEEeC--CcHH
Confidence            46678877666       34666622234556777777654332111  111112233322  56889999998  4567


Q ss_pred             HHHHHHHHHcCC-EEEEEeCC-ccHH----HHHHcCCceEEe-CCChhHHHHhcCCccEEEECCCChh---hHHHHHhcc
Q 021831          189 FAAVQFSVASGC-HVSATCGS-KSID----RVLAAGAEQAVD-YSSKDIELAIKGKFDAVLDTIGAPE---TERLGLNFL  258 (307)
Q Consensus       189 ~~~~~~a~~~G~-~Vi~~~~~-~~~~----~~~~~g~~~v~~-~~~~~~~~~~~~~~dvvid~~g~~~---~~~~~~~~l  258 (307)
                      .+++..++ +|+ +|+++.-. ...+    .++..+....+. ....+   ...++||+|+-+.-...   .+..+.+++
T Consensus       174 ILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~---~~~~~~dlvvANI~~~vL~~l~~~~~~~l  249 (295)
T PF06325_consen  174 ILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSED---LVEGKFDLVVANILADVLLELAPDIASLL  249 (295)
T ss_dssp             HHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSC---TCCS-EEEEEEES-HHHHHHHHHHCHHHE
T ss_pred             HHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEecc---cccccCCEEEECCCHHHHHHHHHHHHHhh
Confidence            77766665 488 78888543 3222    234444322221 11111   11267999998876542   445667789


Q ss_pred             cCCcEEEEeccCc
Q 021831          259 KRGGHYMTLHGET  271 (307)
Q Consensus       259 ~~~G~~v~~g~~~  271 (307)
                      +++|.+|+-|-..
T Consensus       250 ~~~G~lIlSGIl~  262 (295)
T PF06325_consen  250 KPGGYLILSGILE  262 (295)
T ss_dssp             EEEEEEEEEEEEG
T ss_pred             CCCCEEEEccccH
Confidence            9999999977643

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=95.88  E-value=0.071  Score=44.11  Aligned_cols=73  Identities=21%  Similarity=0.264  Sum_probs=49.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-cc-HHHHHHcCC--ceE---EeCCChh-----HHHHhc--CCccE
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KS-IDRVLAAGA--EQA---VDYSSKD-----IELAIK--GKFDA  240 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~-~~~~~~~g~--~~v---~~~~~~~-----~~~~~~--~~~dv  240 (307)
                      ....+|.|+++++|.+..+.....|++|.+.... .. .+.++.++.  +|.   .|.+++.     +.+..+  +.+++
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv   93 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV   93 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence            3457899999999999999999999999887433 32 334566654  222   2333322     222222  67999


Q ss_pred             EEECCCC
Q 021831          241 VLDTIGA  247 (307)
Q Consensus       241 vid~~g~  247 (307)
                      +++|.|-
T Consensus        94 lVncAGI  100 (256)
T KOG1200|consen   94 LVNCAGI  100 (256)
T ss_pred             EEEcCcc
Confidence            9999995

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.85  E-value=0.11  Score=46.20  Aligned_cols=78  Identities=14%  Similarity=0.299  Sum_probs=55.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhHH
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETER  252 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~~  252 (307)
                      -.|.+++|+|+++.+|...+.++...|++|+..-+ +..                 ++.+.+ ..+|++|+++|.+..+.
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~-~t~-----------------~L~~~~-~~aDIvI~AtG~~~~v~  217 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHS-RTQ-----------------NLPELV-KQADIIVGAVGKPELIK  217 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeC-Cch-----------------hHHHHh-ccCCEEEEccCCCCcCC
Confidence            47899999997556999999999999996655433 211                 122222 35899999998764322


Q ss_pred             HHHhcccCCcEEEEeccCc
Q 021831          253 LGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       253 ~~~~~l~~~G~~v~~g~~~  271 (307)
                        ...++++-.++.+|.-+
T Consensus       218 --~~~lk~gavViDvg~n~  234 (283)
T PRK14192        218 --KDWIKQGAVVVDAGFHP  234 (283)
T ss_pred             --HHHcCCCCEEEEEEEee
Confidence              35689999999988543

>PRK08251 short chain dehydrogenase; Provisional

Probab=95.85  E-value=0.31  Score=41.78  Aligned_cols=35  Identities=17%  Similarity=0.289  Sum_probs=30.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK  209 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~  209 (307)
                      +.++||+|++|++|...++.+...|++|+.+.+..
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~   36 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRT   36 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence            46899999999999999888888899988886654

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=95.81  E-value=0.2  Score=43.78  Aligned_cols=32  Identities=16%  Similarity=0.136  Sum_probs=28.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCG  207 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~  207 (307)
                      .+++|.||++++|+..++.+...|++|+.+.+
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~   33 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYH   33 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcC
Confidence            36899999999999999999999999988754

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.80  E-value=0.096  Score=46.31  Aligned_cols=96  Identities=16%  Similarity=0.282  Sum_probs=68.4

Q ss_pred             cccchHHHHHHHHHHHcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHH
Q 021831          154 AIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (307)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~-~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (307)
                      ..++........++ ..++ -.|.+|+|+|.+..+|.-.+.++...|+.|+...+.                  ..++.+
T Consensus       137 ~~PcTp~aii~lL~-~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~------------------t~~l~~  197 (285)
T PRK14189        137 FRPCTPYGVMKMLE-SIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSK------------------TRDLAA  197 (285)
T ss_pred             CcCCCHHHHHHHHH-HcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCC------------------CCCHHH
Confidence            45666666666665 3333 379999999988888999999999999988864211                  112222


Q ss_pred             HhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       233 ~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .+ ...|+||-++|.+..+..  ..+++|..+|.+|-..
T Consensus       198 ~~-~~ADIVV~avG~~~~i~~--~~ik~gavVIDVGin~  233 (285)
T PRK14189        198 HT-RQADIVVAAVGKRNVLTA--DMVKPGATVIDVGMNR  233 (285)
T ss_pred             Hh-hhCCEEEEcCCCcCccCH--HHcCCCCEEEEccccc
Confidence            22 348999999998754443  7899999999999653

>PRK08219 short chain dehydrogenase; Provisional

Probab=95.78  E-value=0.23  Score=41.86  Aligned_cols=71  Identities=15%  Similarity=0.255  Sum_probs=45.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HHHH-HcCCceEE--eCCCh-hHHHHhc--CCccEEEECCCC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVL-AAGAEQAV--DYSSK-DIELAIK--GKFDAVLDTIGA  247 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~~-~~g~~~v~--~~~~~-~~~~~~~--~~~dvvid~~g~  247 (307)
                      .++||.|++|.+|..++..+... .+|+++.++... ..+. .....+++  |..+. ++.+.+.  ++.|.+|.+.|.
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~   81 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV   81 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence            57999999999999988877766 889888776432 2222 22112233  33332 2333333  369999999874

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=95.78  E-value=0.041  Score=47.09  Aligned_cols=69  Identities=29%  Similarity=0.359  Sum_probs=50.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH---HHHHHcCCceE-EeCCChhHHHHhcCCccEEEECCC
Q 021831          178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAGAEQA-VDYSSKDIELAIKGKFDAVLDTIG  246 (307)
Q Consensus       178 VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~---~~~~~~g~~~v-~~~~~~~~~~~~~~~~dvvid~~g  246 (307)
                      |+|.||+|.+|..+++.+...+.+|.+++|..+.   ..++..|+..+ .|+++.+.......++|.||.+++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~   73 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTP   73 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecC
Confidence            7899999999999999999988899999887653   33566787533 123333322322368999999988

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK05854 short chain dehydrogenase; Provisional

Probab=95.78  E-value=0.064  Score=48.29  Aligned_cols=74  Identities=20%  Similarity=0.352  Sum_probs=48.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H-HHH---Hc--CCc-eE--EeCCChh----HHHHhc---C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVL---AA--GAE-QA--VDYSSKD----IELAIK---G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~-~~~---~~--g~~-~v--~~~~~~~----~~~~~~---~  236 (307)
                      .|.+++|+||++++|..+++.+...|++|+.+.++.+. + ...   +.  +.. +.  .|..+.+    +.+.+.   +
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~   92 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR   92 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            47899999999999999999888899999988776432 1 121   21  111 12  3444322    222222   5


Q ss_pred             CccEEEECCCC
Q 021831          237 KFDAVLDTIGA  247 (307)
Q Consensus       237 ~~dvvid~~g~  247 (307)
                      .+|++|++.|.
T Consensus        93 ~iD~li~nAG~  103 (313)
T PRK05854         93 PIHLLINNAGV  103 (313)
T ss_pred             CccEEEECCcc
Confidence            68999999874

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=95.73  E-value=0.12  Score=47.46  Aligned_cols=124  Identities=14%  Similarity=0.114  Sum_probs=82.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCccH----HHHHHcCCceEEeCCChh---H----------------
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSI----DRVLAAGAEQAVDYSSKD---I----------------  230 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~~~----~~~~~~g~~~v~~~~~~~---~----------------  230 (307)
                      .+|.|.|++|.+|..++.+.+.+  .++|++++-..+.    ++.++++...+.-.++..   +                
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~   81 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE   81 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence            47999999999999999988765  5688888633332    346778877665544321   1                


Q ss_pred             --HHHhc-CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc--------cccccccceechhHHHHHHHHHHHhhh
Q 021831          231 --ELAIK-GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA--------ALADHYGLALGLPIATTVLLKKRMQTW  299 (307)
Q Consensus       231 --~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (307)
                        .+.+. ..+|+|+++.++...+...+.+++.|=++.+.-....        ......+..+-...+....+..++...
T Consensus        82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLANKEslV~aG~~i~~~a~~~g~~i~PVDSEh~ai~q~l~~~  161 (385)
T PRK05447         82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALANKESLVCAGELVMDAAKKSGAQILPVDSEHSAIFQCLPGE  161 (385)
T ss_pred             HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEeCHHHHHhhHHHHHHHHHHcCCeEEEECHHHHHHHHHhcCC
Confidence              11111 3589999999987777888889988877777444322        112233455566667777777776643

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.73  E-value=0.43  Score=41.10  Aligned_cols=72  Identities=21%  Similarity=0.288  Sum_probs=46.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH---HH---HHHcCCc-eE--EeCCChh-H---HHHhc---CCcc
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DR---VLAAGAE-QA--VDYSSKD-I---ELAIK---GKFD  239 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~---~~---~~~~g~~-~v--~~~~~~~-~---~~~~~---~~~d  239 (307)
                      .++||.|++|.+|..++..+...|++|+.+.+....   ..   ++..+.. .+  .|.++.+ .   .+.+.   +.+|
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID   82 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999998999999888654321   11   2222321 22  3444322 2   22221   5789


Q ss_pred             EEEECCCC
Q 021831          240 AVLDTIGA  247 (307)
Q Consensus       240 vvid~~g~  247 (307)
                      ++|.+.|.
T Consensus        83 ~vi~~ag~   90 (256)
T PRK12745         83 CLVNNAGV   90 (256)
T ss_pred             EEEECCcc
Confidence            99999874

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=95.72  E-value=0.34  Score=41.62  Aligned_cols=73  Identities=25%  Similarity=0.363  Sum_probs=46.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHH----HHcCCc-eE--EeCCChh-HHH---Hhc---CCcc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRV----LAAGAE-QA--VDYSSKD-IEL---AIK---GKFD  239 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~----~~~g~~-~v--~~~~~~~-~~~---~~~---~~~d  239 (307)
                      +.++||.|++|.+|..++..+...|.+|+.+.++.+ .+.+    ...+.. ..  .|..+.+ +..   .+.   ++.|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            357999999999999999998889999999877543 2222    122322 11  2444332 222   111   4689


Q ss_pred             EEEECCCC
Q 021831          240 AVLDTIGA  247 (307)
Q Consensus       240 vvid~~g~  247 (307)
                      ++|.+.+.
T Consensus        81 ~vi~~a~~   88 (255)
T TIGR01963        81 ILVNNAGI   88 (255)
T ss_pred             EEEECCCC
Confidence            99988764

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=95.68  E-value=0.13  Score=42.66  Aligned_cols=97  Identities=26%  Similarity=0.383  Sum_probs=60.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCcc-HH----HHHHcCCceEEeCCChhHHHHh-cCCccEEEE
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKS-ID----RVLAAGAEQAVDYSSKDIELAI-KGKFDAVLD  243 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~~~-~~----~~~~~g~~~v~~~~~~~~~~~~-~~~~dvvid  243 (307)
                      .++++.+||-+|.  +.|..+..+++.. +++|+++..+++ .+    .++..+.+. +.....+..+.. .+.||+|+-
T Consensus        42 ~l~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~d~~~~~~~~~fDlV~~  118 (187)
T PRK00107         42 YLPGGERVLDVGS--GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHGRAEEFGQEEKFDVVTS  118 (187)
T ss_pred             hcCCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEeccHhhCCCCCCccEEEE
Confidence            3456899999984  4677777777644 569999966543 22    234555543 222222222211 247999987


Q ss_pred             CCCC--hhhHHHHHhcccCCcEEEEeccC
Q 021831          244 TIGA--PETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       244 ~~g~--~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ....  ...+..+.+.|++||+++.+-+.
T Consensus       119 ~~~~~~~~~l~~~~~~LkpGG~lv~~~~~  147 (187)
T PRK00107        119 RAVASLSDLVELCLPLLKPGGRFLALKGR  147 (187)
T ss_pred             ccccCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence            5432  24667788999999999988543

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.68  E-value=0.3  Score=42.24  Aligned_cols=35  Identities=26%  Similarity=0.212  Sum_probs=29.4

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCC
Q 021831          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGS  208 (307)
Q Consensus       174 ~g~~VlI~Ga~--g~~G~~~~~~a~~~G~~Vi~~~~~  208 (307)
                      .+.++||.||+  |++|...+..+...|++|+.+.++
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~   40 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS   40 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence            35789999997  489999988888889999888654

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=95.65  E-value=0.35  Score=38.86  Aligned_cols=115  Identities=26%  Similarity=0.271  Sum_probs=70.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHH-------Hh----c-CCccEEEE
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL-------AI----K-GKFDAVLD  243 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~-------~~----~-~~~dvvid  243 (307)
                      .+|+|.|+-|.+|.+++++.+..+.-|..+.-.++.+    .....+++.+. +|.+       ..    . +++|.||.
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~----Ad~sI~V~~~~-swtEQe~~v~~~vg~sL~gekvDav~C   78 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ----ADSSILVDGNK-SWTEQEQSVLEQVGSSLQGEKVDAVFC   78 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc----ccceEEecCCc-chhHHHHHHHHHHHHhhcccccceEEE
Confidence            5799999999999999999999998887774443322    12223333332 2222       11    1 48999999


Q ss_pred             CCCChh--------------------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHHHHHHHHHH
Q 021831          244 TIGAPE--------------------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKR  295 (307)
Q Consensus       244 ~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (307)
                      -.|+..                          +...+...|++||-+-+.|.-......+.-+-++.-..+..-+..-
T Consensus        79 VAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPgMIGYGMAKaAVHqLt~S  156 (236)
T KOG4022|consen   79 VAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPGMIGYGMAKAAVHQLTSS  156 (236)
T ss_pred             eeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCcccchhHHHHHHHHHHHH
Confidence            777510                          1245667899999999988765533333333344444444433333

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=95.65  E-value=0.09  Score=48.81  Aligned_cols=91  Identities=23%  Similarity=0.298  Sum_probs=57.1

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCccH-HHH-HH-cCC---ceEEeCCChhHHHHhcCCccEEEECCCChh
Q 021831          178 LLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-DRV-LA-AGA---EQAVDYSSKDIELAIKGKFDAVLDTIGAPE  249 (307)
Q Consensus       178 VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~~~~~~~-~~~-~~-~g~---~~v~~~~~~~~~~~~~~~~dvvid~~g~~~  249 (307)
                      |+|+|+ |.+|..+++.+...+-  +|++..++.+. +.+ .+ .+.   ...+|..+.+-...+..+.|+||+|+|...
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~   79 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFF   79 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGG
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccch
Confidence            789998 9999999999887764  77777776554 332 22 221   233444443323333366799999999875


Q ss_pred             hHHHHHhcccCCcEEEEecc
Q 021831          250 TERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~g~  269 (307)
                      ....+-.|++.|-++++.+.
T Consensus        80 ~~~v~~~~i~~g~~yvD~~~   99 (386)
T PF03435_consen   80 GEPVARACIEAGVHYVDTSY   99 (386)
T ss_dssp             HHHHHHHHHHHT-EEEESS-
T ss_pred             hHHHHHHHHHhCCCeeccch
Confidence            66667778889999999544

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=95.63  E-value=0.34  Score=41.56  Aligned_cols=31  Identities=23%  Similarity=0.388  Sum_probs=27.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEe
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATC  206 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~  206 (307)
                      .++||.|++|++|..+++.+...|++|+.+.
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~   33 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINY   33 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEe
Confidence            4799999999999999999988999887664

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.63  E-value=0.024  Score=42.21  Aligned_cols=89  Identities=20%  Similarity=0.303  Sum_probs=57.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhHHH
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERL  253 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~~~  253 (307)
                      .|.+|||+|+ |.+|..-++.+...|++|+++....  ...+  +.-....   ..+. ....++|+||-++++...-..
T Consensus         6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~--~~~~--~~i~~~~---~~~~-~~l~~~~lV~~at~d~~~n~~   76 (103)
T PF13241_consen    6 KGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI--EFSE--GLIQLIR---REFE-EDLDGADLVFAATDDPELNEA   76 (103)
T ss_dssp             TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE--HHHH--TSCEEEE---SS-G-GGCTTESEEEE-SS-HHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch--hhhh--hHHHHHh---hhHH-HHHhhheEEEecCCCHHHHHH
Confidence            4789999995 9999999999999999999987765  1112  2111111   1232 222579999999999855555


Q ss_pred             HHhcccCCcEEEEeccCc
Q 021831          254 GLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       254 ~~~~l~~~G~~v~~g~~~  271 (307)
                      +....+..|.++.+...+
T Consensus        77 i~~~a~~~~i~vn~~D~p   94 (103)
T PF13241_consen   77 IYADARARGILVNVVDDP   94 (103)
T ss_dssp             HHHHHHHTTSEEEETT-C
T ss_pred             HHHHHhhCCEEEEECCCc
Confidence            555566678887776544

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=95.63  E-value=0.072  Score=48.53  Aligned_cols=91  Identities=15%  Similarity=0.214  Sum_probs=57.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC---EEEEEeCCccHHH-HHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhH
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGC---HVSATCGSKSIDR-VLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE  251 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~---~Vi~~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~  251 (307)
                      .+|+|.||+|.+|+..++++..++.   ++..+.+.+.... +.-.+.+..+. +...  ..+ .++|+||.|+|...+.
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~-d~~~--~~~-~~vDvVf~A~g~g~s~   77 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVE-DLTT--FDF-SGVDIALFSAGGSVSK   77 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEe-eCCH--HHH-cCCCEEEECCChHHHH
Confidence            4799999999999999999988654   4555554432211 11112222222 1111  112 4699999999988666


Q ss_pred             HHHHhcccCCcEEEEeccC
Q 021831          252 RLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       252 ~~~~~~l~~~G~~v~~g~~  270 (307)
                      ..+-+.+..|-++|+.+..
T Consensus        78 ~~~~~~~~~G~~VIDlS~~   96 (334)
T PRK14874         78 KYAPKAAAAGAVVIDNSSA   96 (334)
T ss_pred             HHHHHHHhCCCEEEECCch
Confidence            6666666777778877754

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=95.62  E-value=0.39  Score=40.77  Aligned_cols=70  Identities=23%  Similarity=0.360  Sum_probs=45.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc--cH----HHHHHcCCc---eEEeCCChh-HHHHhc------CCccEE
Q 021831          178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGSK--SI----DRVLAAGAE---QAVDYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       178 VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~--~~----~~~~~~g~~---~v~~~~~~~-~~~~~~------~~~dvv  241 (307)
                      +||.|++|.+|..+++.+...|++|+.+.++.  +.    ..++..+.+   ...|..+.. +.+.+.      +++|.+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999988899998886643  21    112333422   222433332 222111      468999


Q ss_pred             EECCCC
Q 021831          242 LDTIGA  247 (307)
Q Consensus       242 id~~g~  247 (307)
                      |.+.|.
T Consensus        81 i~~ag~   86 (239)
T TIGR01830        81 VNNAGI   86 (239)
T ss_pred             EECCCC
Confidence            998885

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06924 short chain dehydrogenase; Provisional

Probab=95.62  E-value=0.19  Score=43.19  Aligned_cols=34  Identities=18%  Similarity=0.311  Sum_probs=30.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK  209 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~  209 (307)
                      +++||+|++|.+|...++.+...|++|+.+.+..
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~   35 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTE   35 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCc
Confidence            4799999999999999999888899999887654

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.56  E-value=0.17  Score=45.06  Aligned_cols=97  Identities=19%  Similarity=0.281  Sum_probs=68.8

Q ss_pred             ccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHH
Q 021831          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (307)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (307)
                      ...++........++...---.|.+|.|+|.++.+|.-.+.++...|+.|++..+...                  +..+
T Consensus       137 ~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~------------------~l~e  198 (301)
T PRK14194        137 VLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST------------------DAKA  198 (301)
T ss_pred             CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC------------------CHHH
Confidence            3456666666666664332246999999998779999999999999998888633221                  2222


Q ss_pred             HhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       233 ~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      .. ...|+||-++|.+..+...  .+++|..+|.+|--
T Consensus       199 ~~-~~ADIVIsavg~~~~v~~~--~ik~GaiVIDvgin  233 (301)
T PRK14194        199 LC-RQADIVVAAVGRPRLIDAD--WLKPGAVVIDVGIN  233 (301)
T ss_pred             HH-hcCCEEEEecCChhcccHh--hccCCcEEEEeccc
Confidence            22 3489999999988555543  38999999999843

>PRK07774 short chain dehydrogenase; Provisional

Probab=95.54  E-value=0.11  Score=44.72  Aligned_cols=74  Identities=23%  Similarity=0.287  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HH---HcCCc-e--EEeCCChh-HHH---Hhc---CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VL---AAGAE-Q--AVDYSSKD-IEL---AIK---GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~---~~g~~-~--v~~~~~~~-~~~---~~~---~~~  238 (307)
                      .+.++||+|++|.+|...++.+...|++|+.+.+.... .. ..   ..+.. +  ..|..+.. ...   .+.   +++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI   84 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            46789999999999999999998899999998776432 11 12   22221 2  23333322 111   111   468


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|.+.|.
T Consensus        85 d~vi~~ag~   93 (250)
T PRK07774         85 DYLVNNAAI   93 (250)
T ss_pred             CEEEECCCC
Confidence            999999884

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=95.53  E-value=0.11  Score=44.71  Aligned_cols=100  Identities=21%  Similarity=0.286  Sum_probs=67.2

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCcc-HHH----HHHcCCceEEeCCChhHHHHhc---CCcc
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDR----VLAAGAEQAVDYSSKDIELAIK---GKFD  239 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~-~~~----~~~~g~~~v~~~~~~~~~~~~~---~~~d  239 (307)
                      .....+|++||=++  +++|-.+..+++..|- +|+++.-+.. +..    +.+.+... +.+-..+. +.+.   ..||
T Consensus        46 ~~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~dA-e~LPf~D~sFD  121 (238)
T COG2226          46 LLGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGDA-ENLPFPDNSFD  121 (238)
T ss_pred             hhCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEech-hhCCCCCCccC
Confidence            44556899999887  6789999999998875 8999876654 333    33444332 22222221 2222   4799


Q ss_pred             EEEECCCC------hhhHHHHHhcccCCcEEEEeccCcc
Q 021831          240 AVLDTIGA------PETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       240 vvid~~g~------~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      +|.-+.|-      ..++..+.+.|+|||+++.+-....
T Consensus       122 ~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p  160 (238)
T COG2226         122 AVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKP  160 (238)
T ss_pred             EEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCC
Confidence            99887774      2377889999999998887775543

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.53  E-value=0.18  Score=40.66  Aligned_cols=97  Identities=19%  Similarity=0.322  Sum_probs=59.1

Q ss_pred             ccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CccHHHHHHcCCceEEeCCChhHH
Q 021831          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSIDRVLAAGAEQAVDYSSKDIE  231 (307)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~  231 (307)
                      ...++.....+..++...---.|.+++|.|.+..+|.-.+.++...|+.|...-. +++                   +.
T Consensus        14 ~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~-------------------l~   74 (160)
T PF02882_consen   14 GFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKN-------------------LQ   74 (160)
T ss_dssp             SS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSS-------------------HH
T ss_pred             CCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCc-------------------cc
Confidence            4455555556666654332347999999999889999999999999998877522 222                   22


Q ss_pred             HHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       232 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +.+ ...|+||.++|.+..+.  ...++++..+|.+|...
T Consensus        75 ~~~-~~ADIVVsa~G~~~~i~--~~~ik~gavVIDvG~~~  111 (160)
T PF02882_consen   75 EIT-RRADIVVSAVGKPNLIK--ADWIKPGAVVIDVGINY  111 (160)
T ss_dssp             HHH-TTSSEEEE-SSSTT-B---GGGS-TTEEEEE--CEE
T ss_pred             cee-eeccEEeeeeccccccc--cccccCCcEEEecCCcc
Confidence            222 34899999999874433  34788998999888643

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.52  E-value=0.19  Score=44.73  Aligned_cols=97  Identities=18%  Similarity=0.296  Sum_probs=70.0

Q ss_pred             ccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCccHHHHHHcCCceEEeCCChhHH
Q 021831          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKSIDRVLAAGAEQAVDYSSKDIE  231 (307)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~-~~~~~~~~~~~~g~~~v~~~~~~~~~  231 (307)
                      ...++.....+..++...---.|.+|+|+|-++.+|.-.+.++...|+.|++. .++.+                   +.
T Consensus       136 ~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~-------------------l~  196 (296)
T PRK14188        136 ALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD-------------------LP  196 (296)
T ss_pred             CCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC-------------------HH
Confidence            34566666666666643222479999999988999999999999999988876 33331                   12


Q ss_pred             HHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       232 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +.. ...|+||-++|.+..+...  .+++|..+|.+|...
T Consensus       197 e~~-~~ADIVIsavg~~~~v~~~--~lk~GavVIDvGin~  233 (296)
T PRK14188        197 AVC-RRADILVAAVGRPEMVKGD--WIKPGATVIDVGINR  233 (296)
T ss_pred             HHH-hcCCEEEEecCChhhcchh--eecCCCEEEEcCCcc
Confidence            222 3489999999998655543  389999999999643

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.52  E-value=0.028  Score=43.40  Aligned_cols=89  Identities=19%  Similarity=0.201  Sum_probs=50.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHH-cCCEEEEE-eCCcc----HHHHHHcCCc--eEEeCCChhHHHHhcCCccEEEECCCCh
Q 021831          177 RLLVLGGGGAVGFAAVQFSVA-SGCHVSAT-CGSKS----IDRVLAAGAE--QAVDYSSKDIELAIKGKFDAVLDTIGAP  248 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~-~G~~Vi~~-~~~~~----~~~~~~~g~~--~v~~~~~~~~~~~~~~~~dvvid~~g~~  248 (307)
                      +|.|+|++|.+|...++.+.. .+.++.+. .+..+    ++.-.-.+..  .+..+  .++.+.+ ..+|++||++.-.
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~--~~l~~~~-~~~DVvIDfT~p~   78 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT--DDLEELL-EEADVVIDFTNPD   78 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEB--S-HHHHT-TH-SEEEEES-HH
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccc--hhHHHhc-ccCCEEEEcCChH
Confidence            689999889999999999987 66777766 44331    1111222211  11111  2343433 3399999999444


Q ss_pred             hhHHHHHhcccCCcEEEEecc
Q 021831          249 ETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       249 ~~~~~~~~~l~~~G~~v~~g~  269 (307)
                       .....++.....|.-+.+|-
T Consensus        79 -~~~~~~~~~~~~g~~~ViGT   98 (124)
T PF01113_consen   79 -AVYDNLEYALKHGVPLVIGT   98 (124)
T ss_dssp             -HHHHHHHHHHHHT-EEEEE-
T ss_pred             -HhHHHHHHHHhCCCCEEEEC
Confidence             55555555555577776665

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=95.42  E-value=0.47  Score=40.41  Aligned_cols=31  Identities=26%  Similarity=0.335  Sum_probs=27.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 021831          178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (307)
Q Consensus       178 VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~  208 (307)
                      +||+|++|.+|...++.+...|++|+.+.+.
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~   31 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHS   31 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence            5899999999999999999999998887654

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.42  E-value=0.17  Score=46.14  Aligned_cols=89  Identities=17%  Similarity=0.199  Sum_probs=60.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhH--
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE--  251 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~--  251 (307)
                      .|.+|.|+| .|.+|..+++.++..|++|++..+..+.......+..    +  .++.+.+ ...|+|+-+++.....  
T Consensus       149 ~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~----~--~~l~ell-~~aDiV~l~lP~t~~T~~  220 (333)
T PRK13243        149 YGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKPEAEKELGAE----Y--RPLEELL-RESDFVSLHVPLTKETYH  220 (333)
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCChhhHHHcCCE----e--cCHHHHH-hhCCEEEEeCCCChHHhh
Confidence            578999999 6999999999999999999888665443333344432    1  1233322 3478888888754211  


Q ss_pred             ---HHHHhcccCCcEEEEeccC
Q 021831          252 ---RLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       252 ---~~~~~~l~~~G~~v~~g~~  270 (307)
                         ...+..|+++..+|.++-.
T Consensus       221 ~i~~~~~~~mk~ga~lIN~aRg  242 (333)
T PRK13243        221 MINEERLKLMKPTAILVNTARG  242 (333)
T ss_pred             ccCHHHHhcCCCCeEEEECcCc
Confidence               3456777888887777743

>PRK08226 short chain dehydrogenase; Provisional

Probab=95.41  E-value=0.11  Score=45.11  Aligned_cols=74  Identities=22%  Similarity=0.350  Sum_probs=48.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHH----HHHcCCc-eE--EeCCChh-HHHHhc------CCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR----VLAAGAE-QA--VDYSSKD-IELAIK------GKFD  239 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~----~~~~g~~-~v--~~~~~~~-~~~~~~------~~~d  239 (307)
                      .+.+++|+|++|.+|...++.+...|++|+.+.++.+...    +...+.. ..  .|..+.. ..+.+.      +..|
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   84 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID   84 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999999999999999999899999988877654221    2222322 12  2333322 222111      5789


Q ss_pred             EEEECCCC
Q 021831          240 AVLDTIGA  247 (307)
Q Consensus       240 vvid~~g~  247 (307)
                      ++|.+.|.
T Consensus        85 ~vi~~ag~   92 (263)
T PRK08226         85 ILVNNAGV   92 (263)
T ss_pred             EEEECCCc
Confidence            99999883

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.37  E-value=0.086  Score=42.65  Aligned_cols=76  Identities=26%  Similarity=0.389  Sum_probs=56.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe--CCccHHHHHHcCCceEEeCCC----hhHHHHhc------CCccE
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC--GSKSIDRVLAAGAEQAVDYSS----KDIELAIK------GKFDA  240 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~--~~~~~~~~~~~g~~~v~~~~~----~~~~~~~~------~~~dv  240 (307)
                      .+|-.-||.|+.+++|.++++.+...|+.|+...  .++..+.++++|-..++...+    .+....+.      +..|+
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~   86 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA   86 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence            3466679999999999999999999999887764  455567899999887775443    23332222      57899


Q ss_pred             EEECCCCh
Q 021831          241 VLDTIGAP  248 (307)
Q Consensus       241 vid~~g~~  248 (307)
                      .+||.|..
T Consensus        87 ~vncagia   94 (260)
T KOG1199|consen   87 LVNCAGIA   94 (260)
T ss_pred             eeecccee
Confidence            99999963

>TIGR00438 rrmJ cell division protein FtsJ

Probab=95.36  E-value=0.29  Score=40.45  Aligned_cols=96  Identities=17%  Similarity=0.142  Sum_probs=55.7

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHc-C-CEEEEEeCCccHHHHHHcCCceE-EeCCChhHHH----Hhc-CCccE
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVAS-G-CHVSATCGSKSIDRVLAAGAEQA-VDYSSKDIEL----AIK-GKFDA  240 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~-G-~~Vi~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~----~~~-~~~dv  240 (307)
                      ...+++|++||.+|+ |+ |..+..+++.. + .+|+++..++..   ...+...+ .+..+....+    ... +++|+
T Consensus        27 ~~~i~~g~~VLDiG~-Gt-G~~~~~l~~~~~~~~~v~~vDis~~~---~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D~  101 (188)
T TIGR00438        27 FKLIKPGDTVLDLGA-AP-GGWSQVAVEQVGGKGRVIAVDLQPMK---PIENVDFIRGDFTDEEVLNKIRERVGDDKVDV  101 (188)
T ss_pred             hcccCCCCEEEEecC-CC-CHHHHHHHHHhCCCceEEEEeccccc---cCCCceEEEeeCCChhHHHHHHHHhCCCCccE
Confidence            446689999999994 43 44444555443 3 478888555432   11233211 2332222211    122 47999


Q ss_pred             EEE-CC----CC------------hhhHHHHHhcccCCcEEEEecc
Q 021831          241 VLD-TI----GA------------PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       241 vid-~~----g~------------~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      |+. ..    |.            ...+..+.++|++||+++....
T Consensus       102 V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~~  147 (188)
T TIGR00438       102 VMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKVF  147 (188)
T ss_pred             EEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence            995 22    22            2366778999999999998653

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.34  E-value=0.39  Score=44.72  Aligned_cols=107  Identities=17%  Similarity=0.189  Sum_probs=67.6

Q ss_pred             HHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCccH--HHHHHcCCceEEeCCChhHHHHhcCCc
Q 021831          162 AWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKF  238 (307)
Q Consensus       162 a~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~~~~~~  238 (307)
                      |....+....--.+.++||+|+ |-+|..++..+...|. +|+...|..+.  +.++++|...+ ..+  +....+ ..+
T Consensus       165 Av~lA~~~~~~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l~--el~~~l-~~~  239 (414)
T COG0373         165 AVELAKRIFGSLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-ALE--ELLEAL-AEA  239 (414)
T ss_pred             HHHHHHHHhcccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cHH--HHHHhh-hhC
Confidence            4444443444336889999996 9999999999999998 55555665443  44788885422 221  222222 459


Q ss_pred             cEEEECCCChhhH---HHHHhcccC-Cc-EEEEeccCccc
Q 021831          239 DAVLDTIGAPETE---RLGLNFLKR-GG-HYMTLHGETAA  273 (307)
Q Consensus       239 dvvid~~g~~~~~---~~~~~~l~~-~G-~~v~~g~~~~~  273 (307)
                      |+||.+++.+..+   ...-..++. .. -+++++.|+..
T Consensus       240 DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiavPRdi  279 (414)
T COG0373         240 DVVISSTSAPHPIITREMVERALKIRKRLLIVDIAVPRDV  279 (414)
T ss_pred             CEEEEecCCCccccCHHHHHHHHhcccCeEEEEecCCCCC
Confidence            9999999976322   222333332 23 57899999763

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.33  E-value=0.22  Score=44.04  Aligned_cols=96  Identities=20%  Similarity=0.347  Sum_probs=67.3

Q ss_pred             ccccchHHHHHHHHHHHcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHH
Q 021831          153 SAIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIE  231 (307)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~-~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~  231 (307)
                      ...++........++ ..++ -.|.+|+|+|.+..+|.-.+.++...||.|...- +..                 .++.
T Consensus       135 ~~~PcTp~avi~lL~-~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~h-s~t-----------------~~l~  195 (285)
T PRK14191        135 GFVPATPMGVMRLLK-HYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCH-ILT-----------------KDLS  195 (285)
T ss_pred             CCCCCcHHHHHHHHH-HhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEe-CCc-----------------HHHH
Confidence            345666666666665 3343 3699999999877999999999999999887652 111                 1122


Q ss_pred             HHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       232 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      +.+ ..+|+|+-++|.+..+.  -..+++|..++.+|-.
T Consensus       196 ~~~-~~ADIvV~AvG~p~~i~--~~~vk~GavVIDvGi~  231 (285)
T PRK14191        196 FYT-QNADIVCVGVGKPDLIK--ASMVKKGAVVVDIGIN  231 (285)
T ss_pred             HHH-HhCCEEEEecCCCCcCC--HHHcCCCcEEEEeecc
Confidence            222 34899999999884433  3467999999999963

>PRK06197 short chain dehydrogenase; Provisional

Probab=95.31  E-value=0.11  Score=46.45  Aligned_cols=36  Identities=22%  Similarity=0.379  Sum_probs=31.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK  209 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~  209 (307)
                      .|.++||.||+|++|..+++.+...|++|+.+.+..
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~   50 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNL   50 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence            578999999999999999998888899998887654

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.24  E-value=0.23  Score=43.90  Aligned_cols=94  Identities=17%  Similarity=0.235  Sum_probs=67.7

Q ss_pred             cccchHHHHHHHHHHHcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHH
Q 021831          154 AIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (307)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~-~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (307)
                      ..++.....+..++ ..++ -.|.+++|+|-+..+|.-.+.++...||.|+..-+.                  ..++.+
T Consensus       138 ~~PcTp~av~~ll~-~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~------------------T~~l~~  198 (285)
T PRK10792        138 LRPCTPRGIMTLLE-RYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRF------------------TKNLRH  198 (285)
T ss_pred             CCCCCHHHHHHHHH-HcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECC------------------CCCHHH
Confidence            45666666666665 3333 369999999987779999999999999988776332                  112222


Q ss_pred             HhcCCccEEEECCCChhhHHHHHhcccCCcEEEEecc
Q 021831          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       233 ~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      .+ ..+|++|.++|.+..+..  ..++++-.+|.+|-
T Consensus       199 ~~-~~ADIvi~avG~p~~v~~--~~vk~gavVIDvGi  232 (285)
T PRK10792        199 HV-RNADLLVVAVGKPGFIPG--EWIKPGAIVIDVGI  232 (285)
T ss_pred             HH-hhCCEEEEcCCCcccccH--HHcCCCcEEEEccc
Confidence            22 358999999998854333  77899999999994

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=95.21  E-value=0.13  Score=46.29  Aligned_cols=73  Identities=18%  Similarity=0.307  Sum_probs=47.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H-HHHHcC---Cc-eE--EeCCChh-H---HHHhc---CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAG---AE-QA--VDYSSKD-I---ELAIK---GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~-~~~~~g---~~-~v--~~~~~~~-~---~~~~~---~~~  238 (307)
                      .+.+++|+||+|++|..+++.+...|++|+.+.++... + ...++.   .. ..  .|..+.+ .   .+.+.   +++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   84 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL   84 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            46789999999999999999888889999988765432 2 223321   11 12  2444322 1   12221   368


Q ss_pred             cEEEECCC
Q 021831          239 DAVLDTIG  246 (307)
Q Consensus       239 dvvid~~g  246 (307)
                      |++|++.|
T Consensus        85 D~li~nAg   92 (322)
T PRK07453         85 DALVCNAA   92 (322)
T ss_pred             cEEEECCc
Confidence            99999987

>PRK06720 hypothetical protein; Provisional

Probab=95.11  E-value=0.21  Score=40.77  Aligned_cols=75  Identities=23%  Similarity=0.312  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HH----HHHHcCCc-eEE--eCCCh-hHHHHh---c---CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-ID----RVLAAGAE-QAV--DYSSK-DIELAI---K---GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~----~~~~~g~~-~v~--~~~~~-~~~~~~---~---~~~  238 (307)
                      .+..++|.||++++|...+..+...|++|+.+.++.. .+    .+.+.+.. ..+  |.++. ++.+.+   .   +++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i   94 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI   94 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999888888999988865533 11    12223432 222  33222 222211   1   578


Q ss_pred             cEEEECCCCh
Q 021831          239 DAVLDTIGAP  248 (307)
Q Consensus       239 dvvid~~g~~  248 (307)
                      |++|++.|..
T Consensus        95 DilVnnAG~~  104 (169)
T PRK06720         95 DMLFQNAGLY  104 (169)
T ss_pred             CEEEECCCcC
Confidence            9999998853

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=95.08  E-value=0.15  Score=47.55  Aligned_cols=100  Identities=22%  Similarity=0.271  Sum_probs=62.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-------HHH-HHc-CCc-eEEeCCChh-HHHHhcC---
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-------DRV-LAA-GAE-QAVDYSSKD-IELAIKG---  236 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-------~~~-~~~-g~~-~v~~~~~~~-~~~~~~~---  236 (307)
                      +-..+.+|||.||+|.+|..+++.+...|.+|+++.++...       ... ... +.. ...|..+.+ +...+.+   
T Consensus        56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~  135 (390)
T PLN02657         56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGD  135 (390)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCC
Confidence            34567899999999999999999998899999998775421       111 111 222 223444433 4343433   


Q ss_pred             CccEEEECCCChh------------hHHHHHhcccCC--cEEEEeccC
Q 021831          237 KFDAVLDTIGAPE------------TERLGLNFLKRG--GHYMTLHGE  270 (307)
Q Consensus       237 ~~dvvid~~g~~~------------~~~~~~~~l~~~--G~~v~~g~~  270 (307)
                      ++|+||+|.+...            ....+++.++..  +++|.++..
T Consensus       136 ~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~  183 (390)
T PLN02657        136 PVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI  183 (390)
T ss_pred             CCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence            6999999986420            112334444332  578888764

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.07  E-value=0.43  Score=37.61  Aligned_cols=96  Identities=18%  Similarity=0.203  Sum_probs=66.0

Q ss_pred             ccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHh
Q 021831          155 IPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAI  234 (307)
Q Consensus       155 ~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~  234 (307)
                      .++........++...---.|.+|+|+|.+..+|.-.+.++...|+.|....+...                  ++.+.+
T Consensus         8 ~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~------------------~l~~~v   69 (140)
T cd05212           8 VSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI------------------QLQSKV   69 (140)
T ss_pred             cccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc------------------CHHHHH
Confidence            44444444445543322237999999999999999999999999998887743211                  112222


Q ss_pred             cCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          235 KGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       235 ~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                       ...|+|+-++|....+.  -..+++|-.++.+|-..
T Consensus        70 -~~ADIVvsAtg~~~~i~--~~~ikpGa~Vidvg~~~  103 (140)
T cd05212          70 -HDADVVVVGSPKPEKVP--TEWIKPGATVINCSPTK  103 (140)
T ss_pred             -hhCCEEEEecCCCCccC--HHHcCCCCEEEEcCCCc
Confidence             34899999999874333  45689999999888654

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.06  E-value=0.56  Score=40.19  Aligned_cols=93  Identities=13%  Similarity=0.203  Sum_probs=58.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCE---EEEEeCC----cc---------HHHHHHcCCceEEeCCChhHHHHhcC
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCH---VSATCGS----KS---------IDRVLAAGAEQAVDYSSKDIELAIKG  236 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~---Vi~~~~~----~~---------~~~~~~~g~~~v~~~~~~~~~~~~~~  236 (307)
                      -.+.+++|+|+ |..|..++..+...|++   ++.+.+.    .+         ..+++.++... .+   .++.+.+ .
T Consensus        23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~---~~l~~~l-~   96 (226)
T cd05311          23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG---GTLKEAL-K   96 (226)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc---CCHHHHH-h
Confidence            35789999996 99999999988888985   6666554    22         11233333211 11   1344444 3


Q ss_pred             CccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          237 KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       237 ~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ++|++|++++....-...++.|+++..++.+..|.
T Consensus        97 ~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~lsnP~  131 (226)
T cd05311          97 GADVFIGVSRPGVVKKEMIKKMAKDPIVFALANPV  131 (226)
T ss_pred             cCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeCCCC
Confidence            49999999973312245667777777666666553

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=95.04  E-value=0.18  Score=42.60  Aligned_cols=98  Identities=24%  Similarity=0.265  Sum_probs=58.7

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCceEEeCCChhHHHHh--cCCccE
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAEQAVDYSSKDIELAI--KGKFDA  240 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~~v~~~~~~~~~~~~--~~~~dv  240 (307)
                      ...+++++++||-+|.  +.|..+..+++.. .+|+++..+.+. +.    +...+...+ +....+..+..  .+.||+
T Consensus        72 ~~l~~~~~~~VLeiG~--GsG~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v-~~~~~d~~~~~~~~~~fD~  147 (212)
T PRK00312         72 ELLELKPGDRVLEIGT--GSGYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNV-SVRHGDGWKGWPAYAPFDR  147 (212)
T ss_pred             HhcCCCCCCEEEEECC--CccHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCce-EEEECCcccCCCcCCCcCE
Confidence            3667889999999984  4566666666553 488888554432 22    334444321 11111111111  146998


Q ss_pred             EEECCCChhhHHHHHhcccCCcEEEEecc
Q 021831          241 VLDTIGAPETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       241 vid~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      |+....-......+...|++||+++..-.
T Consensus       148 I~~~~~~~~~~~~l~~~L~~gG~lv~~~~  176 (212)
T PRK00312        148 ILVTAAAPEIPRALLEQLKEGGILVAPVG  176 (212)
T ss_pred             EEEccCchhhhHHHHHhcCCCcEEEEEEc
Confidence            88765544456778889999999876554

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=95.03  E-value=0.44  Score=40.50  Aligned_cols=71  Identities=21%  Similarity=0.336  Sum_probs=41.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCccHHHHHHcCCc-eEEeCCChhHHHHhc---CCccEEEECCCCh
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSIDRVLAAGAE-QAVDYSSKDIELAIK---GKFDAVLDTIGAP  248 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G--~~Vi~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~---~~~dvvid~~g~~  248 (307)
                      +++|.||+|++|...++.+...|  ..++...+..... ...-... ...|.++.+..+.+.   +++|++|++.|..
T Consensus         2 ~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~~   78 (235)
T PRK09009          2 NILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD-FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGML   78 (235)
T ss_pred             EEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc-cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCccc
Confidence            68999999999999888776654  5665554433221 1000110 123444333222222   5799999999853

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.02  E-value=0.081  Score=50.79  Aligned_cols=73  Identities=19%  Similarity=0.239  Sum_probs=50.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCCh
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAP  248 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~  248 (307)
                      .+.+|++|+|+| .|..|++++++++..|++|++..... +...+++.|... +....  ..+.+ ..+|+||.+.|-+
T Consensus         8 ~~~~~~~v~V~G-~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~-~~~~~--~~~~l-~~~D~VV~SpGi~   81 (488)
T PRK03369          8 PLLPGAPVLVAG-AGVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVAT-VSTSD--AVQQI-ADYALVVTSPGFR   81 (488)
T ss_pred             cccCCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEE-EcCcc--hHhHh-hcCCEEEECCCCC
Confidence            355789999999 59999999999999999998875432 233356667643 32221  11222 3589999999875

>COG0743 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid metabolism]

Probab=95.00  E-value=0.29  Score=44.37  Aligned_cols=130  Identities=17%  Similarity=0.141  Sum_probs=90.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCccHH----HHHHcCCceEEeCCChhH---H---------------
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSID----RVLAAGAEQAVDYSSKDI---E---------------  231 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~~~~~~~~----~~~~~g~~~v~~~~~~~~---~---------------  231 (307)
                      .++.|.|++|.+|..+.++.+.++-  +|++.+-..+.+    +.++++...+...++...   .               
T Consensus         2 k~i~iLGSTGSIG~qtLdVi~~~p~~f~vval~ag~n~~~l~~q~~~f~P~~v~~~d~~~~~~l~~~~~~~~v~~G~~~l   81 (385)
T COG0743           2 KKLTILGSTGSIGTQTLDVIRRNPDKFEVVALAAGKNVELLAEQIREFKPKYVVIADESAAKELEDLLPGTEVLVGEEGL   81 (385)
T ss_pred             ceEEEEecCCchhHHHHHHHHhCCCcEEEEEEecCCcHHHHHHHHHHhCCceEEecChHHHHHHHhhccCceEEecHHHH
Confidence            4789999999999999999999876  588886666643    356788777654443221   1               


Q ss_pred             -HHhc-CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc--------ccccccccceechhHHHHHHHHHHHhhhhc
Q 021831          232 -LAIK-GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET--------AALADHYGLALGLPIATTVLLKKRMQTWYS  301 (307)
Q Consensus       232 -~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (307)
                       +... ...|+|+++.-+...+...+..++.|-++.+.-.-+        .+.....|..+-+..+....+-.++....+
T Consensus        82 ~e~a~~~~~d~Vm~AivG~aGL~pTlaAi~aGK~iaLANKEsLV~aG~l~~~~~k~~g~~llPVDSEH~AifQ~L~~~~~  161 (385)
T COG0743          82 CELAAEDDADVVMNAIVGAAGLLPTLAAIKAGKTIALANKESLVTAGELVMDAAKESGAQLLPVDSEHNAIFQCLQGETQ  161 (385)
T ss_pred             HHHHhcCCCCEEeehhhhhcccHHHHHHHHcCCceeecchhhhhcccHHHHHHHHHcCCEEeccCchhHHHHHHcCcccc
Confidence             1111 468999999776656677777777776665544332        244455677788888888888888888888


Q ss_pred             cccc
Q 021831          302 YGIG  305 (307)
Q Consensus       302 ~~i~  305 (307)
                      ++|+
T Consensus       162 ~~v~  165 (385)
T COG0743         162 KGVK  165 (385)
T ss_pred             Ccce
Confidence            8776

>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase

Probab=94.94  E-value=0.14  Score=46.32  Aligned_cols=95  Identities=20%  Similarity=0.188  Sum_probs=62.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC----CEEEEEeCCcc---HHHHHHcCC--------------------ceEEeCCChh
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASG----CHVSATCGSKS---IDRVLAAGA--------------------EQAVDYSSKD  229 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G----~~Vi~~~~~~~---~~~~~~~g~--------------------~~v~~~~~~~  229 (307)
                      +|.|+|. |.+|..+.+.+...+    ++|..+..-..   ..++.+.+-                    ..+.-....+
T Consensus         1 ~IaInGf-GrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~   79 (325)
T TIGR01532         1 RVAINGF-GRIGRNVLRALYESGERLGIEVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT   79 (325)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence            4789996 999999999988754    67777744222   223333221                    0111111111


Q ss_pred             HHHHh-c-CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          230 IELAI-K-GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       230 ~~~~~-~-~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      ..+.. . .++|+||+|+|.......+...++.|++.|.++.|..
T Consensus        80 p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP~~  124 (325)
T TIGR01532        80 PEALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHPGA  124 (325)
T ss_pred             hhhccccccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCCCc
Confidence            11111 1 3799999999998788889999999999999998854

Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=94.92  E-value=0.12  Score=45.68  Aligned_cols=91  Identities=15%  Similarity=0.193  Sum_probs=58.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCc-eEEeCCChh-HHHHhc-----CC-ccEEEECCCCh
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE-QAVDYSSKD-IELAIK-----GK-FDAVLDTIGAP  248 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~-~v~~~~~~~-~~~~~~-----~~-~dvvid~~g~~  248 (307)
                      +|||+||+|.+|..+++.+...|.+|.+++++.+...  ..+.. ...|+.+.+ +.+.+.     .+ +|.++-+.+..
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~--~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~   78 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA--GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPI   78 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc--CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCC
Confidence            4899999999999999999888999999987654221  12222 124555543 444442     45 89998776642


Q ss_pred             ----hhHHHHHhcccCCc--EEEEecc
Q 021831          249 ----ETERLGLNFLKRGG--HYMTLHG  269 (307)
Q Consensus       249 ----~~~~~~~~~l~~~G--~~v~~g~  269 (307)
                          .....++..++..|  ++|.++.
T Consensus        79 ~~~~~~~~~~i~aa~~~gv~~~V~~Ss  105 (285)
T TIGR03649        79 PDLAPPMIKFIDFARSKGVRRFVLLSA  105 (285)
T ss_pred             CChhHHHHHHHHHHHHcCCCEEEEeec
Confidence                12334444444433  7887764

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN03075 nicotianamine synthase; Provisional

Probab=94.90  E-value=0.2  Score=44.61  Aligned_cols=95  Identities=8%  Similarity=0.057  Sum_probs=60.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCc-cHHHHHH-----cCCceEEeCCChhHHHHh--cCCccEEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSK-SIDRVLA-----AGAEQAVDYSSKDIELAI--KGKFDAVLD  243 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~-~~~~~~~-----~g~~~v~~~~~~~~~~~~--~~~~dvvid  243 (307)
                      +.++|+-+| +|+.++.++.+++.+  +.+++++..+. ..+.+++     .+...-+.....+..+..  .++||+||-
T Consensus       123 ~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l~~FDlVF~  201 (296)
T PLN03075        123 VPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESLKEYDVVFL  201 (296)
T ss_pred             CCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhcccccCCcCEEEE
Confidence            789999999 699999888888654  34788885544 3333332     232222222222222222  257999988


Q ss_pred             CC------CC-hhhHHHHHhcccCCcEEEEecc
Q 021831          244 TI------GA-PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       244 ~~------g~-~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      .+      .. ...+..+.+.|+|||.++.-..
T Consensus       202 ~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~~  234 (296)
T PLN03075        202 AALVGMDKEEKVKVIEHLGKHMAPGALLMLRSA  234 (296)
T ss_pred             ecccccccccHHHHHHHHHHhcCCCcEEEEecc
Confidence            75      22 2467889999999999988653

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=94.80  E-value=0.38  Score=41.36  Aligned_cols=96  Identities=20%  Similarity=0.226  Sum_probs=54.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCc----c--------------------HHHHHHcCCceEEe-CC--
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSK----S--------------------IDRVLAAGAEQAVD-YS--  226 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~----~--------------------~~~~~~~g~~~v~~-~~--  226 (307)
                      ..+|+|.| .|++|..+++.+-+.|. +++.+....    +                    .+.++++..+.-+. +.  
T Consensus        11 ~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~~   89 (231)
T cd00755          11 NAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEEF   89 (231)
T ss_pred             CCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeeee
Confidence            46899999 59999999999999998 555543211    0                    01122333221111 11  


Q ss_pred             --ChhHHHHhcCCccEEEECCCChhhHHHHHhcccCCc-EEEEeccCc
Q 021831          227 --SKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGG-HYMTLHGET  271 (307)
Q Consensus       227 --~~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G-~~v~~g~~~  271 (307)
                        .+...+.+...+|+||||..+...-..+.......+ .+|..++..
T Consensus        90 i~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip~I~s~g~g  137 (231)
T cd00755          90 LTPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKRKIPVISSMGAG  137 (231)
T ss_pred             cCHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEEeCCc
Confidence              122333333579999999988744444444444333 455555443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=94.79  E-value=0.11  Score=49.68  Aligned_cols=74  Identities=23%  Similarity=0.319  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc----------------------cHHHHHHcCCceEEeCCCh-h-
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK----------------------SIDRVLAAGAEQAVDYSSK-D-  229 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~----------------------~~~~~~~~g~~~v~~~~~~-~-  229 (307)
                      .+++|+|+|+ |+.|+.++..++..|.+|+......                      ..+.++++|.+..++.... + 
T Consensus       140 ~~~~V~IIG~-GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  218 (467)
T TIGR01318       140 TGKRVAVIGA-GPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRDI  218 (467)
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCcc
Confidence            5789999995 9999999999999999877664322                      1234677887654443211 1 


Q ss_pred             HHHHhcCCccEEEECCCCh
Q 021831          230 IELAIKGKFDAVLDTIGAP  248 (307)
Q Consensus       230 ~~~~~~~~~dvvid~~g~~  248 (307)
                      ..+....++|.||.++|..
T Consensus       219 ~~~~~~~~~D~vilAtGa~  237 (467)
T TIGR01318       219 SLDDLLEDYDAVFLGVGTY  237 (467)
T ss_pred             CHHHHHhcCCEEEEEeCCC
Confidence            1111224699999999975

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=94.78  E-value=0.39  Score=40.12  Aligned_cols=96  Identities=20%  Similarity=0.226  Sum_probs=57.2

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCceEEeCCChhHHHH-hcCCccEEE
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAEQAVDYSSKDIELA-IKGKFDAVL  242 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~~v~~~~~~~~~~~-~~~~~dvvi  242 (307)
                      .....++.+||-.|.  +.|..+..+++. |.+|+++..+.. .+.    ....+...+ +....++.+. ..+.||+|+
T Consensus        25 ~l~~~~~~~vLDiGc--G~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~d~~~~~~~~~fD~I~  100 (197)
T PRK11207         25 AVKVVKPGKTLDLGC--GNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNL-HTAVVDLNNLTFDGEYDFIL  100 (197)
T ss_pred             hcccCCCCcEEEECC--CCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEecChhhCCcCCCcCEEE
Confidence            344556789999983  458888888765 889999966543 222    223332211 1111122211 124699998


Q ss_pred             ECCCC--------hhhHHHHHhcccCCcEEEEec
Q 021831          243 DTIGA--------PETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       243 d~~g~--------~~~~~~~~~~l~~~G~~v~~g  268 (307)
                      .+..-        ...+..+.+.|+|||.++.+.
T Consensus       101 ~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~  134 (197)
T PRK11207        101 STVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA  134 (197)
T ss_pred             EecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            76431        235678888999999965443

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=94.77  E-value=0.071  Score=43.41  Aligned_cols=95  Identities=17%  Similarity=0.184  Sum_probs=60.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCC-----------------Ch----hHHH
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYS-----------------SK----DIEL  232 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~-----------------~~----~~~~  232 (307)
                      ..+|+|.| +|.+|+.|+++++.+|++|+..... ++.+..+..+...+....                 ..    .+.+
T Consensus        20 p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~   98 (168)
T PF01262_consen   20 PAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE   98 (168)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred             CeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence            47899999 5999999999999999998888554 344556666665443310                 01    1222


Q ss_pred             HhcCCccEEEECC---CCh---hhHHHHHhcccCCcEEEEeccCc
Q 021831          233 AIKGKFDAVLDTI---GAP---ETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       233 ~~~~~~dvvid~~---g~~---~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .+ ..+|++|.+.   +..   -.....++.|+++..++++.-..
T Consensus        99 ~i-~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~  142 (168)
T PF01262_consen   99 FI-APADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQ  142 (168)
T ss_dssp             HH-HH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGG
T ss_pred             HH-hhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecC
Confidence            22 3579998642   111   12356678899999999987543

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=94.62  E-value=0.18  Score=44.65  Aligned_cols=93  Identities=15%  Similarity=0.204  Sum_probs=57.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCccH--HHHHHcCCce----EEeCCChhHHHHhcCCccEEEECC
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGAEQ----AVDYSSKDIELAIKGKFDAVLDTI  245 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~~--~~~~~~g~~~----v~~~~~~~~~~~~~~~~dvvid~~  245 (307)
                      .+|++++|.|| |+.+.+++..+...|+ +++.+.|+.++  +.++.++...    ..+..+  +.. . ..+|++||++
T Consensus       124 ~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~--~~~-~-~~~dliINaT  198 (283)
T COG0169         124 VTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALAD--LEG-L-EEADLLINAT  198 (283)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccc--ccc-c-cccCEEEECC
Confidence            45899999996 9999999999999997 78777775432  2234444221    111111  110 0 1489999998


Q ss_pred             CChhh------HHHHHhcccCCcEEEEeccCc
Q 021831          246 GAPET------ERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       246 g~~~~------~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +..-.      .-. ..++++.-.+..+-..+
T Consensus       199 p~Gm~~~~~~~~~~-~~~l~~~~~v~D~vY~P  229 (283)
T COG0169         199 PVGMAGPEGDSPVP-AELLPKGAIVYDVVYNP  229 (283)
T ss_pred             CCCCCCCCCCCCCc-HHhcCcCCEEEEeccCC
Confidence            64211      111 45677777776666443

>PLN02928 oxidoreductase family protein

Probab=94.62  E-value=0.28  Score=44.93  Aligned_cols=95  Identities=21%  Similarity=0.185  Sum_probs=59.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcC----C-ceEEe--CCChhHHHHhcCCccEEEECCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAG----A-EQAVD--YSSKDIELAIKGKFDAVLDTIG  246 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g----~-~~v~~--~~~~~~~~~~~~~~dvvid~~g  246 (307)
                      .|.++.|+| .|.+|+.+++.++.+|++|++..++........++    . ....+  ....++.+.+ ...|+|+.+++
T Consensus       158 ~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell-~~aDiVvl~lP  235 (347)
T PLN02928        158 FGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFA-GEADIVVLCCT  235 (347)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHH-hhCCEEEECCC
Confidence            478999999 69999999999999999999986653222111110    0 00000  0112333333 34799998887


Q ss_pred             Chhh-----HHHHHhcccCCcEEEEeccC
Q 021831          247 APET-----ERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       247 ~~~~-----~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ....     -...+..|+++..+|-+|-.
T Consensus       236 lt~~T~~li~~~~l~~Mk~ga~lINvaRG  264 (347)
T PLN02928        236 LTKETAGIVNDEFLSSMKKGALLVNIARG  264 (347)
T ss_pred             CChHhhcccCHHHHhcCCCCeEEEECCCc
Confidence            4321     14566788888888888743

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=94.59  E-value=0.18  Score=46.10  Aligned_cols=93  Identities=15%  Similarity=0.144  Sum_probs=58.6

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCccH--HHHHHcC-Cce--EEeCCChhHHHHhcCCccEEEECCCChh
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI--DRVLAAG-AEQ--AVDYSSKDIELAIKGKFDAVLDTIGAPE  249 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~~~~--~~~~~~g-~~~--v~~~~~~~~~~~~~~~~dvvid~~g~~~  249 (307)
                      -+|+|.||+|.+|...++.+..+ +++++.+.+.+..  ...+..+ ...  ...+.+.+..  ...++|+||.|++...
T Consensus         3 ~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP~~~   80 (343)
T PRK00436          3 IKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE--ILAGADVVFLALPHGV   80 (343)
T ss_pred             eEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHH--HhcCCCEEEECCCcHH
Confidence            37999999999999888888766 5688777653221  1122211 110  0111111111  1245999999999986


Q ss_pred             hHHHHHhcccCCcEEEEeccC
Q 021831          250 TERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ..+.+..+++.|=++|+.++.
T Consensus        81 ~~~~v~~a~~aG~~VID~S~~  101 (343)
T PRK00436         81 SMDLAPQLLEAGVKVIDLSAD  101 (343)
T ss_pred             HHHHHHHHHhCCCEEEECCcc
Confidence            767777777777678888865

>PRK07402 precorrin-6B methylase; Provisional

Probab=94.58  E-value=1  Score=37.38  Aligned_cols=101  Identities=15%  Similarity=0.165  Sum_probs=59.6

Q ss_pred             HHHcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCcc-HHH----HHHcCCc--eEEeCCChhHHHHhcCCc
Q 021831          167 KCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKS-IDR----VLAAGAE--QAVDYSSKDIELAIKGKF  238 (307)
Q Consensus       167 ~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~~~-~~~----~~~~g~~--~v~~~~~~~~~~~~~~~~  238 (307)
                      .....++++++||=.|+  +.|..+..+++.. +.+|+++..+.+ .+.    +++++..  .++..+..+....+...+
T Consensus        33 ~~~l~~~~~~~VLDiG~--G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~  110 (196)
T PRK07402         33 ISQLRLEPDSVLWDIGA--GTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLAPAP  110 (196)
T ss_pred             HHhcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCCCCC
Confidence            34557788999988884  4566777777654 469999865543 222    3345543  233332222122222334


Q ss_pred             cE-EEECCCC-hhhHHHHHhcccCCcEEEEecc
Q 021831          239 DA-VLDTIGA-PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       239 dv-vid~~g~-~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      |. +++.... ...+..+.+.|++||+++....
T Consensus       111 d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~~  143 (196)
T PRK07402        111 DRVCIEGGRPIKEILQAVWQYLKPGGRLVATAS  143 (196)
T ss_pred             CEEEEECCcCHHHHHHHHHHhcCCCeEEEEEee
Confidence            44 4543322 2467888889999999988753

>PLN02256 arogenate dehydrogenase

Probab=94.55  E-value=0.7  Score=41.47  Aligned_cols=92  Identities=22%  Similarity=0.167  Sum_probs=60.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhh
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET  250 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~  250 (307)
                      .--.+.+|.|+| .|.+|...+..++..|.+|++..++.....+..+|...   ..  +..+.+....|+||-|+... .
T Consensus        32 ~~~~~~kI~IIG-~G~mG~slA~~L~~~G~~V~~~d~~~~~~~a~~~gv~~---~~--~~~e~~~~~aDvVilavp~~-~  104 (304)
T PLN02256         32 EKSRKLKIGIVG-FGNFGQFLAKTFVKQGHTVLATSRSDYSDIAAELGVSF---FR--DPDDFCEEHPDVVLLCTSIL-S  104 (304)
T ss_pred             ccCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECccHHHHHHHcCCee---eC--CHHHHhhCCCCEEEEecCHH-H
Confidence            334567899999 59999998888888888888887665444456666532   11  22222223589999998865 3


Q ss_pred             HHHHH-----hcccCCcEEEEecc
Q 021831          251 ERLGL-----NFLKRGGHYMTLHG  269 (307)
Q Consensus       251 ~~~~~-----~~l~~~G~~v~~g~  269 (307)
                      +...+     ..++++..++.++.
T Consensus       105 ~~~vl~~l~~~~l~~~~iviDv~S  128 (304)
T PLN02256        105 TEAVLRSLPLQRLKRSTLFVDVLS  128 (304)
T ss_pred             HHHHHHhhhhhccCCCCEEEecCC
Confidence            33332     23557777788776

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.52  E-value=0.4  Score=42.42  Aligned_cols=97  Identities=20%  Similarity=0.257  Sum_probs=68.4

Q ss_pred             cccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHH
Q 021831          154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA  233 (307)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  233 (307)
                      ..++........++...---.|.+|.|+|-++.+|.-.+.++...|+.|+.. .++.                 .+..+.
T Consensus       137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~-~s~t-----------------~~l~~~  198 (284)
T PRK14179        137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLT-HSRT-----------------RNLAEV  198 (284)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEE-CCCC-----------------CCHHHH
Confidence            4566666666666533222479999999999999999999999999988765 2111                 112222


Q ss_pred             hcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       234 ~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      . ...|+||-++|.+..+...  .+++|..+|.+|--.
T Consensus       199 ~-~~ADIVI~avg~~~~v~~~--~ik~GavVIDvgin~  233 (284)
T PRK14179        199 A-RKADILVVAIGRGHFVTKE--FVKEGAVVIDVGMNR  233 (284)
T ss_pred             H-hhCCEEEEecCccccCCHH--HccCCcEEEEeccee
Confidence            2 3489999999998555543  489999999998653

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=94.52  E-value=0.12  Score=51.42  Aligned_cols=73  Identities=16%  Similarity=0.301  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc----------------------cHHHHHHcCCceEEeCCC---h
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK----------------------SIDRVLAAGAEQAVDYSS---K  228 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~----------------------~~~~~~~~g~~~v~~~~~---~  228 (307)
                      .+++|+|+|+ |+.|+.++..++..|.+|+...+..                      +.+.++++|.+..++...   .
T Consensus       309 ~~kkVaIIG~-GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  387 (639)
T PRK12809        309 RSEKVAVIGA-GPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI  387 (639)
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence            4899999995 9999999999999999887764333                      123456778765555432   1


Q ss_pred             hHHHHhcCCccEEEECCCCh
Q 021831          229 DIELAIKGKFDAVLDTIGAP  248 (307)
Q Consensus       229 ~~~~~~~~~~dvvid~~g~~  248 (307)
                      .+.+ +..+||.||.++|..
T Consensus       388 ~~~~-l~~~~DaV~latGa~  406 (639)
T PRK12809        388 TFSD-LTSEYDAVFIGVGTY  406 (639)
T ss_pred             CHHH-HHhcCCEEEEeCCCC
Confidence            2322 335799999999974

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=94.51  E-value=0.24  Score=45.39  Aligned_cols=93  Identities=13%  Similarity=0.150  Sum_probs=57.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEE-eCCcc--HHHHHHcC---CceEEeCCChhHHHHhcCCccEEEECCCChh
Q 021831          177 RLLVLGGGGAVGFAAVQFSVAS-GCHVSAT-CGSKS--IDRVLAAG---AEQAVDYSSKDIELAIKGKFDAVLDTIGAPE  249 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~-~~~~~--~~~~~~~g---~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~  249 (307)
                      +|.|.||+|.+|...++++..+ +.+++.+ .+.+.  +.....+.   ..........+..+.. .++|+||-|++...
T Consensus         2 kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~DvVf~alP~~~   80 (346)
T TIGR01850         2 KVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPIDEEEIA-EDADVVFLALPHGV   80 (346)
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCccccccCCceeecCCHHHhh-cCCCEEEECCCchH
Confidence            6899999999999999998876 5677755 33221  11222222   1001111211222222 36999999999986


Q ss_pred             hHHHHHhcccCCcEEEEeccC
Q 021831          250 TERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      +.+.+..++..|-++|+.++.
T Consensus        81 s~~~~~~~~~~G~~VIDlS~~  101 (346)
T TIGR01850        81 SAELAPELLAAGVKVIDLSAD  101 (346)
T ss_pred             HHHHHHHHHhCCCEEEeCChh
Confidence            666666666777788888865

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK07574 formate dehydrogenase; Provisional

Probab=94.49  E-value=0.44  Score=44.19  Aligned_cols=90  Identities=16%  Similarity=0.125  Sum_probs=59.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhH-
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE-  251 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~-  251 (307)
                      .|.+|.|+| .|.+|+.+++.++.+|++|++..+.. .......++...   +  .++.+.+ ...|+|+.+++..... 
T Consensus       191 ~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~---~--~~l~ell-~~aDvV~l~lPlt~~T~  263 (385)
T PRK07574        191 EGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTY---H--VSFDSLV-SVCDVVTIHCPLHPETE  263 (385)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCcee---c--CCHHHHh-hcCCEEEEcCCCCHHHH
Confidence            478999999 59999999999999999999887654 223233444321   1  1233332 4478888887754222 


Q ss_pred             ----HHHHhcccCCcEEEEeccC
Q 021831          252 ----RLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       252 ----~~~~~~l~~~G~~v~~g~~  270 (307)
                          ...+..|+++..+|.++-.
T Consensus       264 ~li~~~~l~~mk~ga~lIN~aRG  286 (385)
T PRK07574        264 HLFDADVLSRMKRGSYLVNTARG  286 (385)
T ss_pred             HHhCHHHHhcCCCCcEEEECCCC
Confidence                3456677788777777643

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=94.49  E-value=0.29  Score=43.56  Aligned_cols=96  Identities=11%  Similarity=0.140  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCc----cH-HHHHHcC---Cc---eEEeCCCh-hHHHHhcCCccE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSK----SI-DRVLAAG---AE---QAVDYSSK-DIELAIKGKFDA  240 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~-Vi~~~~~~----~~-~~~~~~g---~~---~v~~~~~~-~~~~~~~~~~dv  240 (307)
                      .+.+++|+|+ |+.|.+++..+...|++ |+...++.    +. +.++++.   ..   ...+..+. ++.+.+ ..+|+
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~-~~~Di  202 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEI-ASSDI  202 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhh-ccCCE
Confidence            5789999997 89999998888889994 77777653    22 2223331   11   11233221 122222 45799


Q ss_pred             EEECCCChh-----hHHH-HHhcccCCcEEEEeccCc
Q 021831          241 VLDTIGAPE-----TERL-GLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       241 vid~~g~~~-----~~~~-~~~~l~~~G~~v~~g~~~  271 (307)
                      +|+|+.-..     .... ....+.++..++++-..+
T Consensus       203 lINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P  239 (289)
T PRK12548        203 LVNATLVGMKPNDGETNIKDTSVFRKDLVVADTVYNP  239 (289)
T ss_pred             EEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecCCC
Confidence            999985320     0001 124567777777776443

>PRK06953 short chain dehydrogenase; Provisional

Probab=94.46  E-value=0.24  Score=41.88  Aligned_cols=72  Identities=25%  Similarity=0.350  Sum_probs=47.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCc-eEEeCCChh-HHH---Hhc-CCccEEEECCCC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAE-QAVDYSSKD-IEL---AIK-GKFDAVLDTIGA  247 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~-~v~~~~~~~-~~~---~~~-~~~dvvid~~g~  247 (307)
                      .+++|+|++|.+|...++.+...|++|+.+.+... .+.+...+.. ...|.++.+ +.+   .+. +++|++|.+.|.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~   80 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV   80 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence            47899999999999999888888999988876533 2334434432 233444432 222   222 368999998775

>PRK14967 putative methyltransferase; Provisional

Probab=94.37  E-value=0.52  Score=40.16  Aligned_cols=95  Identities=26%  Similarity=0.339  Sum_probs=58.8

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCcc-HHH----HHHcCCc-eEEeCCChhHHHHhc-CCccE
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDR----VLAAGAE-QAVDYSSKDIELAIK-GKFDA  240 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~-~~~----~~~~g~~-~v~~~~~~~~~~~~~-~~~dv  240 (307)
                      ...++++++||-.|. |. |..+..+++. ++ +++++..+.. .+.    ++..+.. .+++   .++.+.+. +.||+
T Consensus        31 ~~~~~~~~~vLDlGc-G~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~---~d~~~~~~~~~fD~  104 (223)
T PRK14967         31 AEGLGPGRRVLDLCT-GS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR---GDWARAVEFRPFDV  104 (223)
T ss_pred             hcccCCCCeEEEecC-CH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE---CchhhhccCCCeeE
Confidence            345678999999994 44 8888888775 66 8888855543 322    2333432 2222   23333233 57999


Q ss_pred             EEECCCC---------------------------hhhHHHHHhcccCCcEEEEecc
Q 021831          241 VLDTIGA---------------------------PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       241 vid~~g~---------------------------~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      |+...+-                           ...+..+.+.|++||+++.+-.
T Consensus       105 Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~~  160 (223)
T PRK14967        105 VVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQS  160 (223)
T ss_pred             EEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence            9875320                           0124567889999999997644

>PRK01581 speE spermidine synthase; Validated

Probab=94.37  E-value=0.58  Score=42.88  Aligned_cols=95  Identities=17%  Similarity=0.211  Sum_probs=57.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEe-CCccHHHHHHc--------C-C-c---eEEeCCChhHHHHhcCC
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATC-GSKSIDRVLAA--------G-A-E---QAVDYSSKDIELAIKGK  237 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~-~~~~~~~~~~~--------g-~-~---~v~~~~~~~~~~~~~~~  237 (307)
                      ....+||++|  |+.|.++..+++..+. +|.++- +.+-.+.++++        + . +   .++..+...+.....+.
T Consensus       149 ~~PkrVLIIG--gGdG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~~~~~  226 (374)
T PRK01581        149 IDPKRVLILG--GGDGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSSPSSL  226 (374)
T ss_pred             CCCCEEEEEC--CCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHhcCCC
Confidence            3457999999  4567777777776554 777774 33334555531        0 0 1   22222222333333357


Q ss_pred             ccEEEECCCC-----------hhhHHHHHhcccCCcEEEEecc
Q 021831          238 FDAVLDTIGA-----------PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       238 ~dvvid~~g~-----------~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      ||+||--...           .+.+..+.+.|+++|.++.-..
T Consensus       227 YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs~  269 (374)
T PRK01581        227 YDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQSN  269 (374)
T ss_pred             ccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence            9988765433           2245788889999999988654

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=94.35  E-value=0.38  Score=42.86  Aligned_cols=35  Identities=17%  Similarity=0.289  Sum_probs=27.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSK  209 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~  209 (307)
                      .+.+++|+|+ |+.+.+++..+..+|+ +++...|+.
T Consensus       123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~  158 (288)
T PRK12749        123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRD  158 (288)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            5679999996 7778887777777898 777777763

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=94.30  E-value=0.18  Score=44.71  Aligned_cols=73  Identities=19%  Similarity=0.133  Sum_probs=45.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCccH--HHHHHcCCc-eEEeCCC-hhHHHHhcCCccEEEECCCCh
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGAE-QAVDYSS-KDIELAIKGKFDAVLDTIGAP  248 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~~--~~~~~~g~~-~v~~~~~-~~~~~~~~~~~dvvid~~g~~  248 (307)
                      .+.+++|+|+ |+.+.+++..+..+|+ +++.+.|+.++  ..++.++.. .+..... .++.. ....+|+||+|++..
T Consensus       124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~-~~~~~DiVInaTp~g  201 (282)
T TIGR01809       124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLA-IEKAAEVLVSTVPAD  201 (282)
T ss_pred             CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhh-cccCCCEEEECCCCC
Confidence            5789999995 9999999998999998 67777766432  223444321 1111111 11111 124699999998754

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=94.29  E-value=0.66  Score=40.78  Aligned_cols=98  Identities=15%  Similarity=0.209  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCc-------c-----------------HHHHHHcCCc-eEEeC--
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSK-------S-----------------IDRVLAAGAE-QAVDY--  225 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~-------~-----------------~~~~~~~g~~-~v~~~--  225 (307)
                      .+.+|+|.| .|++|..++..+-..|. +++.+....       +                 .+.+.++..+ .+...  
T Consensus        29 ~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~  107 (268)
T PRK15116         29 ADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDD  107 (268)
T ss_pred             cCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEec
Confidence            467899999 59999999999999997 655543211       0                 0112223322 12111  


Q ss_pred             --CChhHHHHhcCCccEEEECCCChhhHHHHHhccc-CCcEEEEeccCcc
Q 021831          226 --SSKDIELAIKGKFDAVLDTIGAPETERLGLNFLK-RGGHYMTLHGETA  272 (307)
Q Consensus       226 --~~~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~~  272 (307)
                        +.+...+.+..++|+||||......-..+....+ .+=.++.+|+...
T Consensus       108 ~i~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGag~  157 (268)
T PRK15116        108 FITPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGG  157 (268)
T ss_pred             ccChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCccc
Confidence              1122333333579999999998534333444443 3445666665543

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.29  E-value=0.41  Score=43.11  Aligned_cols=89  Identities=15%  Similarity=0.184  Sum_probs=58.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhH--
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE--  251 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~--  251 (307)
                      .|.+|.|+| .|.+|..+++.++.+|++|++..+..+..    .+.....  ...++.+.+ ...|+|+.+++.....  
T Consensus       135 ~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~----~~~~~~~--~~~~l~e~l-~~aDvvv~~lPlt~~T~~  206 (312)
T PRK15469        135 EDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSW----PGVQSFA--GREELSAFL-SQTRVLINLLPNTPETVG  206 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCC----CCceeec--ccccHHHHH-hcCCEEEECCCCCHHHHH
Confidence            578999999 69999999999999999999886543211    1222111  112333333 4478888888754322  


Q ss_pred             ---HHHHhcccCCcEEEEeccC
Q 021831          252 ---RLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       252 ---~~~~~~l~~~G~~v~~g~~  270 (307)
                         ...+..|+++..+|-+|-.
T Consensus       207 li~~~~l~~mk~ga~lIN~aRG  228 (312)
T PRK15469        207 IINQQLLEQLPDGAYLLNLARG  228 (312)
T ss_pred             HhHHHHHhcCCCCcEEEECCCc
Confidence               3456678888888877744

>PLN02244 tocopherol O-methyltransferase

Probab=94.27  E-value=0.3  Score=44.62  Aligned_cols=94  Identities=18%  Similarity=0.228  Sum_probs=58.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCceEEeCCChhHHHH-hc-CCccEEEECC
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAEQAVDYSSKDIELA-IK-GKFDAVLDTI  245 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~~v~~~~~~~~~~~-~~-~~~dvvid~~  245 (307)
                      +++++||=+|  .+.|..+..+++..|++|+++..++. .+.    .++.+...-+.....+..+. .. +.||+|+..-
T Consensus       117 ~~~~~VLDiG--CG~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~~~~~~~FD~V~s~~  194 (340)
T PLN02244        117 KRPKRIVDVG--CGIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQPFEDGQFDLVWSME  194 (340)
T ss_pred             CCCCeEEEec--CCCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccCCCCCCCccEEEECC
Confidence            6889999998  45677888888888999999966544 222    23333321111111111111 11 4799998643


Q ss_pred             C-----C-hhhHHHHHhcccCCcEEEEec
Q 021831          246 G-----A-PETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       246 g-----~-~~~~~~~~~~l~~~G~~v~~g  268 (307)
                      .     + ...+..+.+.|+|||+++...
T Consensus       195 ~~~h~~d~~~~l~e~~rvLkpGG~lvi~~  223 (340)
T PLN02244        195 SGEHMPDKRKFVQELARVAAPGGRIIIVT  223 (340)
T ss_pred             chhccCCHHHHHHHHHHHcCCCcEEEEEE
Confidence            3     2 236678899999999998864

>PLN00016 RNA-binding protein; Provisional

Probab=94.27  E-value=0.39  Score=44.41  Aligned_cols=96  Identities=21%  Similarity=0.319  Sum_probs=61.6

Q ss_pred             CCCEEEEE----cCCchHHHHHHHHHHHcCCEEEEEeCCccH-H-----------HHHHcCCceEEeCCChhHHHHhc-C
Q 021831          174 EGQRLLVL----GGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-----------RVLAAGAEQAVDYSSKDIELAIK-G  236 (307)
Q Consensus       174 ~g~~VlI~----Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~-----------~~~~~g~~~v~~~~~~~~~~~~~-~  236 (307)
                      ...+|||+    ||+|-+|..++..+...|.+|+++++.... .           .+...+.. .+..+..++...+. .
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~-~v~~D~~d~~~~~~~~  129 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVK-TVWGDPADVKSKVAGA  129 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCce-EEEecHHHHHhhhccC
Confidence            34689999    999999999999998889999999876432 1           11122333 22233333333333 4


Q ss_pred             CccEEEECCCCh-hhHHHHHhcccCC--cEEEEeccC
Q 021831          237 KFDAVLDTIGAP-ETERLGLNFLKRG--GHYMTLHGE  270 (307)
Q Consensus       237 ~~dvvid~~g~~-~~~~~~~~~l~~~--G~~v~~g~~  270 (307)
                      ++|+||++.+.. .....+++.++..  .++|.++..
T Consensus       130 ~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~  166 (378)
T PLN00016        130 GFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA  166 (378)
T ss_pred             CccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence            799999998753 2344555555433  378887754

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.26  E-value=0.59  Score=41.37  Aligned_cols=95  Identities=16%  Similarity=0.196  Sum_probs=67.7

Q ss_pred             ccccchHHHHHHHHHHHcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCccHHHHHHcCCceEEeCCChhH
Q 021831          153 SAIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC-GSKSIDRVLAAGAEQAVDYSSKDI  230 (307)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~-~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~-~~~~~~~~~~~g~~~v~~~~~~~~  230 (307)
                      ...++.....+..++ ..++ -.|.+++|+|-+..+|.-.+.++...||.|...- ..++                   +
T Consensus       142 ~~~PcTp~av~~ll~-~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~-------------------l  201 (287)
T PRK14176        142 GLVPCTPHGVIRALE-EYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDD-------------------L  201 (287)
T ss_pred             CCCCCcHHHHHHHHH-HcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCC-------------------H
Confidence            345666666666665 3344 3799999999888899999999999999886653 2221                   2


Q ss_pred             HHHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          231 ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       231 ~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      .+.. ..+|++|.++|.+..+  --..+++|..+|.+|.-
T Consensus       202 ~~~~-~~ADIvv~AvG~p~~i--~~~~vk~gavVIDvGin  238 (287)
T PRK14176        202 KKYT-LDADILVVATGVKHLI--KADMVKEGAVIFDVGIT  238 (287)
T ss_pred             HHHH-hhCCEEEEccCCcccc--CHHHcCCCcEEEEeccc
Confidence            2211 3489999999988544  24578999999999974

>PLN02696 1-deoxy-D-xylulose-5-phosphate reductoisomerase

Probab=94.24  E-value=0.62  Score=43.78  Aligned_cols=124  Identities=15%  Similarity=0.138  Sum_probs=81.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCccH----HHHHHcCCceEEeCCCh---------------------
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSI----DRVLAAGAEQAVDYSSK---------------------  228 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~~~----~~~~~~g~~~v~~~~~~---------------------  228 (307)
                      .+|.|.|++|.+|.-+.++.+.+  .++|++..-..+.    ++++++....+.-.++.                     
T Consensus        58 KkI~ILGSTGSIGtqtLdVI~~~pd~f~vvaLaag~Ni~lL~~q~~~f~p~~v~v~d~~~~~~l~~~l~~~~~~~~vl~G  137 (454)
T PLN02696         58 KPISLLGSTGSIGTQTLDIVAENPDKFKVVALAAGSNVTLLADQVRKFKPKLVAVRNESLVDELKEALADLDDKPEIIPG  137 (454)
T ss_pred             cEEEEecCCcHhhHHHHHHHHhCccccEEEEEECCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhcCCCCCcEEEEC
Confidence            58999999999999999998865  4578887554443    33566777666554432                     


Q ss_pred             --hHHHHhc-CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc--------cccccccceechhHHHHHHHHHHHh
Q 021831          229 --DIELAIK-GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA--------ALADHYGLALGLPIATTVLLKKRMQ  297 (307)
Q Consensus       229 --~~~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~  297 (307)
                        .+.+.+. ..+|+|+++..+...+...+..++.|=++.+.-....        .....++...-+..+....+-.++.
T Consensus       138 ~egl~~la~~~evDiVV~AIvG~aGL~pTl~AIkaGK~VALANKESLV~aG~lI~~~ak~~~~~IlPVDSEHsAIfQ~L~  217 (454)
T PLN02696        138 EEGIVEVARHPEAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAKKHGVKILPADSEHSAIFQCIQ  217 (454)
T ss_pred             HHHHHHHHcCCCCCEEEEeCccccchHHHHHHHHCCCcEEEecHHHHHhhHHHHHHHHHHcCCeEeecchhhHHHHHHcc
Confidence              1122222 3689999999886677777888888877666543321        2233456666666777777766666


Q ss_pred             hh
Q 021831          298 TW  299 (307)
Q Consensus       298 ~~  299 (307)
                      +.
T Consensus       218 g~  219 (454)
T PLN02696        218 GL  219 (454)
T ss_pred             CC
Confidence            43

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=94.23  E-value=0.27  Score=43.27  Aligned_cols=94  Identities=18%  Similarity=0.193  Sum_probs=58.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HHHHHc---CCceEEeCCChhHHHHhcCCccEEEECCC
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAA---GAEQAVDYSSKDIELAIKGKFDAVLDTIG  246 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~~~~~---g~~~v~~~~~~~~~~~~~~~~dvvid~~g  246 (307)
                      ...+.+++|+|+ |++|.+++..+...|++|+...++.+.  +.++.+   +......     ..+.....+|+||+|++
T Consensus       114 ~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~-----~~~~~~~~~DivInatp  187 (270)
T TIGR00507       114 LRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFS-----MDELPLHRVDLIINATS  187 (270)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEec-----hhhhcccCccEEEECCC
Confidence            345789999996 899999998888889988777665432  223333   2212221     11111246899999998


Q ss_pred             Chh--hH---HHHHhcccCCcEEEEeccCc
Q 021831          247 APE--TE---RLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       247 ~~~--~~---~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ...  ..   ......++++..++.+...+
T Consensus       188 ~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p  217 (270)
T TIGR00507       188 AGMSGNIDEPPVPAEKLKEGMVVYDMVYNP  217 (270)
T ss_pred             CCCCCCCCCCCCCHHHcCCCCEEEEeccCC
Confidence            631  11   11234577888888886543

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=94.23  E-value=0.12  Score=47.96  Aligned_cols=92  Identities=13%  Similarity=0.172  Sum_probs=57.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCccHHH-HHHcCC----ceEEeCCChhHHHHhcCCccEEEECCCChh
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSIDR-VLAAGA----EQAVDYSSKDIELAIKGKFDAVLDTIGAPE  249 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~~~~~~-~~~~g~----~~v~~~~~~~~~~~~~~~~dvvid~~g~~~  249 (307)
                      .+|.|.||+|.+|+..++++..+ ..++..+.+.+.... +.....    ....+..+.+. ..+ .+.|+||-++++. 
T Consensus        39 ~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~-~~~-~~~DvVf~Alp~~-  115 (381)
T PLN02968         39 KRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKD-ADF-SDVDAVFCCLPHG-  115 (381)
T ss_pred             cEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCH-HHh-cCCCEEEEcCCHH-
Confidence            58999999999999999999888 568777765432211 111111    01111111111 112 4699999999997 


Q ss_pred             hHHHHHhcccCCcEEEEeccC
Q 021831          250 TERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ........+..+-++|+.+..
T Consensus       116 ~s~~i~~~~~~g~~VIDlSs~  136 (381)
T PLN02968        116 TTQEIIKALPKDLKIVDLSAD  136 (381)
T ss_pred             HHHHHHHHHhCCCEEEEcCch
Confidence            445555556767778888865

>PRK00811 spermidine synthase; Provisional

Probab=94.22  E-value=0.34  Score=43.00  Aligned_cols=95  Identities=15%  Similarity=0.186  Sum_probs=57.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEe-CCccHHHHHHc----C--C--c---eEEeCCChhHHHHhcCCcc
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATC-GSKSIDRVLAA----G--A--E---QAVDYSSKDIELAIKGKFD  239 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~-~~~~~~~~~~~----g--~--~---~v~~~~~~~~~~~~~~~~d  239 (307)
                      ...++||++|+  +.|..+..+++..+. +|.++- +.+-.+.+++.    +  .  +   .++..+...+.....+.||
T Consensus        75 ~~p~~VL~iG~--G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yD  152 (283)
T PRK00811         75 PNPKRVLIIGG--GDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAETENSFD  152 (283)
T ss_pred             CCCCEEEEEec--CchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHHHhhCCCccc
Confidence            35679999994  457778888877665 777774 33333333321    1  1  1   2333333334333235799


Q ss_pred             EEEECCCC----------hhhHHHHHhcccCCcEEEEecc
Q 021831          240 AVLDTIGA----------PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       240 vvid~~g~----------~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      +||--...          .+.+..+.+.|+++|.++.-..
T Consensus       153 vIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~~  192 (283)
T PRK00811        153 VIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQSG  192 (283)
T ss_pred             EEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeCC
Confidence            98864322          2235678899999999987543

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=94.22  E-value=0.3  Score=43.81  Aligned_cols=91  Identities=16%  Similarity=0.108  Sum_probs=59.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChh--
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE--  249 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~--  249 (307)
                      ..+|.|+| .|.+|...+..++..|.  +|++..++. +.+.+++.|......   .+..+.+ ...|+||.|++...  
T Consensus         6 ~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~---~~~~~~~-~~aDvViiavp~~~~~   80 (307)
T PRK07502          6 FDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT---TSAAEAV-KGADLVILCVPVGASG   80 (307)
T ss_pred             CcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec---CCHHHHh-cCCCEEEECCCHHHHH
Confidence            36899999 59999999998888885  677776554 345566666432211   1222222 46899999998752  


Q ss_pred             -hHHHHHhcccCCcEEEEeccC
Q 021831          250 -TERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       250 -~~~~~~~~l~~~G~~v~~g~~  270 (307)
                       .+......++++..++.+|..
T Consensus        81 ~v~~~l~~~l~~~~iv~dvgs~  102 (307)
T PRK07502         81 AVAAEIAPHLKPGAIVTDVGSV  102 (307)
T ss_pred             HHHHHHHhhCCCCCEEEeCccc
Confidence             233344566778878777764

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=94.22  E-value=1  Score=38.67  Aligned_cols=98  Identities=20%  Similarity=0.210  Sum_probs=59.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-------ccH-----------------HHHHHcCCceEEeC---
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-------KSI-----------------DRVLAAGAEQAVDY---  225 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-------~~~-----------------~~~~~~g~~~v~~~---  225 (307)
                      +.++|+|.|. |++|.++++.+-+.|+ ++..+.-.       .++                 ++.+......-++.   
T Consensus        29 ~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~  107 (263)
T COG1179          29 KQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND  107 (263)
T ss_pred             hhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh
Confidence            3578999995 9999999999999998 55544211       111                 11112222211111   


Q ss_pred             --CChhHHHHhcCCccEEEECCCChhh-HHHHHhcccCCcEEEEeccCcc
Q 021831          226 --SSKDIELAIKGKFDAVLDTIGAPET-ERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       226 --~~~~~~~~~~~~~dvvid~~g~~~~-~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                        +.+...+.+..+||.||||.-+-.. ...+..|.+.+=.+|+.++...
T Consensus       108 f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag~  157 (263)
T COG1179         108 FITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAGG  157 (263)
T ss_pred             hhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccccC
Confidence              1223333344689999999987533 3344446666668888887655

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=94.21  E-value=0.36  Score=42.75  Aligned_cols=96  Identities=18%  Similarity=0.265  Sum_probs=58.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCccH-H-HHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChh
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-D-RVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE  249 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~~-~-~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~  249 (307)
                      ..+.+++|+|+ |++|.+++..+..+|+ +|+...++.+. + .+++++....+.. ..+..+. ...+|+||+|++...
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~~~~-~~~~DivInaTp~g~  197 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLELQEE-LADFDLIINATSAGM  197 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cccchhc-cccCCEEEECCcCCC
Confidence            35778999995 9999999999999995 88888776442 2 2333332110111 1111111 146999999987541


Q ss_pred             h-----HHHHHhcccCCcEEEEeccCc
Q 021831          250 T-----ERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       250 ~-----~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .     .......++++..++++-..+
T Consensus       198 ~~~~~~~~~~~~~l~~~~~v~DivY~P  224 (278)
T PRK00258        198 SGELPLPPLPLSLLRPGTIVYDMIYGP  224 (278)
T ss_pred             CCCCCCCCCCHHHcCCCCEEEEeecCC
Confidence            1     012235677788887776543

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.19  E-value=0.57  Score=41.33  Aligned_cols=98  Identities=13%  Similarity=0.169  Sum_probs=67.9

Q ss_pred             ccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHH
Q 021831          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (307)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (307)
                      ...++.....+..++...---.|.+|+|+|-+..+|.-.+.+....|+.|....+..                  .++.+
T Consensus       130 ~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t------------------~~L~~  191 (279)
T PRK14178        130 GFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKT------------------ENLKA  191 (279)
T ss_pred             CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecCh------------------hHHHH
Confidence            345666666666665332223699999999888999999999999999887764321                  12233


Q ss_pred             HhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       233 ~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .+ ..+|++|.++|.+..+.  -..+++|..+|.+|-..
T Consensus       192 ~~-~~ADIvI~Avgk~~lv~--~~~vk~GavVIDVgi~~  227 (279)
T PRK14178        192 EL-RQADILVSAAGKAGFIT--PDMVKPGATVIDVGINQ  227 (279)
T ss_pred             HH-hhCCEEEECCCcccccC--HHHcCCCcEEEEeeccc
Confidence            22 35899999999663333  23479999999999653

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=94.19  E-value=0.37  Score=38.20  Aligned_cols=94  Identities=20%  Similarity=0.231  Sum_probs=58.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCcc-H-HHHHHcCCce-EEeCCChhHHHHhcCCccEEEECCCCh
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKS-I-DRVLAAGAEQ-AVDYSSKDIELAIKGKFDAVLDTIGAP  248 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~~~-~-~~~~~~g~~~-v~~~~~~~~~~~~~~~~dvvid~~g~~  248 (307)
                      ..+.+++|+|+ |.+|...++.+...| .+|+...++.+ . ...++++... ....  .+..+. .+++|+||.+++..
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~Dvvi~~~~~~   92 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAY--LDLEEL-LAEADLIINTTPVG   92 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceee--cchhhc-cccCCEEEeCcCCC
Confidence            45789999995 999999998888886 46777665533 2 2244444321 0111  122222 25699999999876


Q ss_pred             hh----HHHHHhcccCCcEEEEeccC
Q 021831          249 ET----ERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       249 ~~----~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ..    .......++++..++.++..
T Consensus        93 ~~~~~~~~~~~~~~~~~~~v~D~~~~  118 (155)
T cd01065          93 MKPGDELPLPPSLLKPGGVVYDVVYN  118 (155)
T ss_pred             CCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence            32    11222446778888887654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=94.17  E-value=0.22  Score=44.80  Aligned_cols=72  Identities=28%  Similarity=0.312  Sum_probs=46.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHH---H-cCC---ceEE--eCCCh-hHHHHhcCCccEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVL---A-AGA---EQAV--DYSSK-DIELAIKGKFDAVL  242 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~---~-~g~---~~v~--~~~~~-~~~~~~~~~~dvvi  242 (307)
                      .|.+|||+||+|-+|...++.+...|.+|+++.++.. .....   . .+.   -..+  |..+. .+.+.+ .++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~~d~vi   82 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAI-EGCDAVF   82 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHH-hCCCEEE
Confidence            4789999999999999999988888999988766543 22211   1 111   1222  22222 233333 4689999


Q ss_pred             ECCC
Q 021831          243 DTIG  246 (307)
Q Consensus       243 d~~g  246 (307)
                      .+.+
T Consensus        83 h~A~   86 (322)
T PLN02986         83 HTAS   86 (322)
T ss_pred             EeCC
Confidence            9886

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=94.17  E-value=0.46  Score=43.02  Aligned_cols=87  Identities=13%  Similarity=0.111  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHH-HcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhh--
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSV-ASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET--  250 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~-~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~--  250 (307)
                      .|.++.|+| .|.+|+.+++.++ .+|++|+...+..........+...+      ++.+.+ ...|+|.-+++....  
T Consensus       144 ~gktvGIiG-~G~IG~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~~~~~------~l~ell-~~sDvv~lh~plt~~T~  215 (323)
T PRK15409        144 HHKTLGIVG-MGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYC------DLDTLL-QESDFVCIILPLTDETH  215 (323)
T ss_pred             CCCEEEEEc-ccHHHHHHHHHHHhcCCCEEEEECCCCchhhHHhcCcEec------CHHHHH-HhCCEEEEeCCCChHHh
Confidence            578999999 6999999999998 89999987765433332333443211      222222 336777776654311  


Q ss_pred             ---HHHHHhcccCCcEEEEec
Q 021831          251 ---ERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       251 ---~~~~~~~l~~~G~~v~~g  268 (307)
                         -...+..|+++..+|-++
T Consensus       216 ~li~~~~l~~mk~ga~lIN~a  236 (323)
T PRK15409        216 HLFGAEQFAKMKSSAIFINAG  236 (323)
T ss_pred             hccCHHHHhcCCCCeEEEECC
Confidence               133556667776666665

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=94.16  E-value=0.45  Score=40.75  Aligned_cols=90  Identities=28%  Similarity=0.436  Sum_probs=59.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHH----HcCCceEEeCCChhHHHHhc--CCccEEEE--
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVL----AAGAEQAVDYSSKDIELAIK--GKFDAVLD--  243 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~----~~g~~~v~~~~~~~~~~~~~--~~~dvvid--  243 (307)
                      -+|-+||=.|.+|  |+++.-+|+. |++|+++.-++ ..+.++    +-|..  ++|......+...  +.||+|++  
T Consensus        58 l~g~~vLDvGCGg--G~Lse~mAr~-Ga~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~~~~edl~~~~~~FDvV~cmE  132 (243)
T COG2227          58 LPGLRVLDVGCGG--GILSEPLARL-GASVTGIDASEKPIEVAKLHALESGVN--IDYRQATVEDLASAGGQFDVVTCME  132 (243)
T ss_pred             CCCCeEEEecCCc--cHhhHHHHHC-CCeeEEecCChHHHHHHHHhhhhcccc--ccchhhhHHHHHhcCCCccEEEEhh
Confidence            3788899998544  5666666654 89999995544 344333    33333  5566554444443  48999976  


Q ss_pred             ---CCCChh-hHHHHHhcccCCcEEEEe
Q 021831          244 ---TIGAPE-TERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       244 ---~~g~~~-~~~~~~~~l~~~G~~v~~  267 (307)
                         -+.++. .+..+.++++|+|.++.-
T Consensus       133 VlEHv~dp~~~~~~c~~lvkP~G~lf~S  160 (243)
T COG2227         133 VLEHVPDPESFLRACAKLVKPGGILFLS  160 (243)
T ss_pred             HHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence               466653 567788999999988764

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.15  E-value=0.61  Score=41.22  Aligned_cols=97  Identities=15%  Similarity=0.186  Sum_probs=69.6

Q ss_pred             ccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCccHHHHHHcCCceEEeCCChhHH
Q 021831          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC-GSKSIDRVLAAGAEQAVDYSSKDIE  231 (307)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~-~~~~~~~~~~~g~~~v~~~~~~~~~  231 (307)
                      ...++.....+..++...---.|.+++|.|.+..+|.=.+.++...||.|+..- .+++                   +.
T Consensus       136 ~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~d-------------------l~  196 (282)
T PRK14180        136 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTD-------------------LK  196 (282)
T ss_pred             CcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCC-------------------HH
Confidence            345666666676776443334699999999999999999999999999886652 2222                   11


Q ss_pred             HHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       232 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +.. ...|++|-++|.+..+.  -..+++|..+|.+|-..
T Consensus       197 ~~~-k~ADIvIsAvGkp~~i~--~~~vk~gavVIDvGin~  233 (282)
T PRK14180        197 SHT-TKADILIVAVGKPNFIT--ADMVKEGAVVIDVGINH  233 (282)
T ss_pred             HHh-hhcCEEEEccCCcCcCC--HHHcCCCcEEEEecccc
Confidence            111 34899999999984433  36789999999999643

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=94.13  E-value=0.28  Score=44.13  Aligned_cols=73  Identities=19%  Similarity=0.298  Sum_probs=47.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCccH-H-HHHHcCC----ceE--EeCCChh----HHHHhc---CCc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI-D-RVLAAGA----EQA--VDYSSKD----IELAIK---GKF  238 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~~~~-~-~~~~~g~----~~v--~~~~~~~----~~~~~~---~~~  238 (307)
                      +.+++|.|+++++|...++.+...| ++|+.+.++.+. + ..+++..    .+.  .|.++.+    +.+.+.   +++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   82 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL   82 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            5689999999999999988888889 899888765432 1 2233321    112  3444332    222221   469


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|++.|.
T Consensus        83 D~lI~nAG~   91 (314)
T TIGR01289        83 DALVCNAAV   91 (314)
T ss_pred             CEEEECCCc
Confidence            999999874

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=94.13  E-value=0.22  Score=45.41  Aligned_cols=47  Identities=19%  Similarity=0.191  Sum_probs=37.5

Q ss_pred             HHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 021831          161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (307)
Q Consensus       161 ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~  208 (307)
                      |||.-++....+ ++.+|||+||+|-+|...+..+...|.+|+++.+.
T Consensus         2 ~~~~~~~~~~~~-~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~   48 (348)
T PRK15181          2 TAYEELRTKLVL-APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNF   48 (348)
T ss_pred             chhhhhhhcccc-cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence            566666544444 45789999999999999999999999999988653

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=94.12  E-value=0.74  Score=39.14  Aligned_cols=98  Identities=26%  Similarity=0.402  Sum_probs=65.0

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCC-ccHH----HHHHcCCceEEeCCC-hhHHHHh----cC
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGS-KSID----RVLAAGAEQAVDYSS-KDIELAI----KG  236 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G--~~Vi~~~~~-~~~~----~~~~~g~~~v~~~~~-~~~~~~~----~~  236 (307)
                      ........++|=+|  +.+|..++.+|..+.  .+++++-.+ ++.+    .+++.|.++.+..-. .+..+.+    .+
T Consensus        54 L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~~~~~  131 (219)
T COG4122          54 LARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSRLLDG  131 (219)
T ss_pred             HHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHhccCC
Confidence            45666788999998  678999999998776  378887544 3333    355677765322221 2222222    26


Q ss_pred             CccEEE-ECCCC--hhhHHHHHhcccCCcEEEEec
Q 021831          237 KFDAVL-DTIGA--PETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       237 ~~dvvi-d~~g~--~~~~~~~~~~l~~~G~~v~~g  268 (307)
                      .||+|| |+--.  +..++.++++|++||.+|.=-
T Consensus       132 ~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DN  166 (219)
T COG4122         132 SFDLVFIDADKADYPEYLERALPLLRPGGLIVADN  166 (219)
T ss_pred             CccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEee
Confidence            899775 55433  457889999999999987643

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.10  E-value=0.65  Score=41.05  Aligned_cols=96  Identities=14%  Similarity=0.217  Sum_probs=68.2

Q ss_pred             ccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCccHHHHHHcCCceEEeCCChhHH
Q 021831          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC-GSKSIDRVLAAGAEQAVDYSSKDIE  231 (307)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~-~~~~~~~~~~~g~~~v~~~~~~~~~  231 (307)
                      ...++.....+..++...---.|.+++|.|-+..+|.=.+.++...||.|+..- +.++                   +.
T Consensus       137 ~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~-------------------l~  197 (284)
T PRK14177        137 TYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQN-------------------LP  197 (284)
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC-------------------HH
Confidence            345666666666665333224799999999999999999999999999887652 2222                   22


Q ss_pred             HHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       232 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      +.. ...|++|-++|.+..+.  -..+++|..+|.+|--
T Consensus       198 ~~~-~~ADIvIsAvGk~~~i~--~~~ik~gavVIDvGin  233 (284)
T PRK14177        198 SIV-RQADIIVGAVGKPEFIK--ADWISEGAVLLDAGYN  233 (284)
T ss_pred             HHH-hhCCEEEEeCCCcCccC--HHHcCCCCEEEEecCc
Confidence            222 34899999999884433  5678999999999863

>PLN00203 glutamyl-tRNA reductase

Probab=94.10  E-value=1.5  Score=42.33  Aligned_cols=97  Identities=15%  Similarity=0.207  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCccH-H-HHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhh
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-D-RVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET  250 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~~-~-~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~  250 (307)
                      .+.+|+|+|+ |.+|.++++.+...|+ +|+...++.+. . ....++...+......+..+.+ ..+|+||.|++....
T Consensus       265 ~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~al-~~aDVVIsAT~s~~p  342 (519)
T PLN00203        265 ASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLACA-AEADVVFTSTSSETP  342 (519)
T ss_pred             CCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHHHH-hcCCEEEEccCCCCC
Confidence            3789999996 9999999999999998 67777666432 2 2344432111111112233322 569999999876432


Q ss_pred             --HHHHHhcccC----Cc---EEEEeccCcc
Q 021831          251 --ERLGLNFLKR----GG---HYMTLHGETA  272 (307)
Q Consensus       251 --~~~~~~~l~~----~G---~~v~~g~~~~  272 (307)
                        ....+..+.+    +|   .+|+++.|..
T Consensus       343 vI~~e~l~~~~~~~~~~~~~~~~IDLAvPRd  373 (519)
T PLN00203        343 LFLKEHVEALPPASDTVGGKRLFVDISVPRN  373 (519)
T ss_pred             eeCHHHHHHhhhcccccCCCeEEEEeCCCCC
Confidence              2233333321    12   5899999975

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=94.07  E-value=0.25  Score=45.60  Aligned_cols=74  Identities=22%  Similarity=0.162  Sum_probs=46.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHH-HHHcCCc-eEEeCCChhHHHHhcCCccEEEECCC
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR-VLAAGAE-QAVDYSSKDIELAIKGKFDAVLDTIG  246 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~-~~~~g~~-~v~~~~~~~~~~~~~~~~dvvid~~g  246 (307)
                      ..+.+|||+|++|-+|..++..+...|.+|+++.+...... ...+... +..|..+.+....+..++|+||.+++
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa   94 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAA   94 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence            35689999999999999999999999999999876432111 0011111 11233332222222246899999975

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.07  E-value=0.21  Score=45.06  Aligned_cols=97  Identities=23%  Similarity=0.355  Sum_probs=64.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHH--HHHH----cCCce----EEeCCCh----hHHHHhc---C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSID--RVLA----AGAEQ----AVDYSSK----DIELAIK---G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~--~~~~----~g~~~----v~~~~~~----~~~~~~~---~  236 (307)
                      .|.+++|+|+++++|..++.-+..+|++|+..+++.+..  ..+.    .....    ..|.++.    .+.+...   .
T Consensus        34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~  113 (314)
T KOG1208|consen   34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEG  113 (314)
T ss_pred             CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCC
Confidence            467999999999999999999999999999998876421  1222    22222    2333332    2333332   5


Q ss_pred             CccEEEECCCCh-----------------------hhHHHHHhcccCC--cEEEEeccC
Q 021831          237 KFDAVLDTIGAP-----------------------ETERLGLNFLKRG--GHYMTLHGE  270 (307)
Q Consensus       237 ~~dvvid~~g~~-----------------------~~~~~~~~~l~~~--G~~v~~g~~  270 (307)
                      ..|+.|+++|--                       -..+.++..|+..  +|+|.++..
T Consensus       114 ~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~  172 (314)
T KOG1208|consen  114 PLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSI  172 (314)
T ss_pred             CccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCc
Confidence            789999988841                       0124555666544  899998874

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=94.04  E-value=0.77  Score=37.84  Aligned_cols=95  Identities=15%  Similarity=0.218  Sum_probs=59.1

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCcc-HHHH----HHcCCc--eEEeCCChhHHHHhcCCccE
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKS-IDRV----LAAGAE--QAVDYSSKDIELAIKGKFDA  240 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~~~-~~~~----~~~g~~--~v~~~~~~~~~~~~~~~~dv  240 (307)
                      ...+.++++||=+|.  +.|..+..+++... .+|+++..+.+ .+.+    ...+..  .++..+   ......+.||+
T Consensus        26 ~l~~~~~~~vLDiG~--G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~d---~~~~~~~~~D~  100 (187)
T PRK08287         26 KLELHRAKHLIDVGA--GTGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPGE---APIELPGKADA  100 (187)
T ss_pred             hcCCCCCCEEEEECC--cCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEecC---chhhcCcCCCE
Confidence            456678899998883  45777778887653 58999865543 2332    334432  222222   11223357999


Q ss_pred             EEECCCC---hhhHHHHHhcccCCcEEEEec
Q 021831          241 VLDTIGA---PETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       241 vid~~g~---~~~~~~~~~~l~~~G~~v~~g  268 (307)
                      |+.....   ...+..+.+.|+++|+++...
T Consensus       101 v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~~  131 (187)
T PRK08287        101 IFIGGSGGNLTAIIDWSLAHLHPGGRLVLTF  131 (187)
T ss_pred             EEECCCccCHHHHHHHHHHhcCCCeEEEEEE
Confidence            9865321   235677889999999998743

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=94.04  E-value=0.48  Score=45.97  Aligned_cols=89  Identities=19%  Similarity=0.147  Sum_probs=62.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhh---
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET---  250 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~---  250 (307)
                      .|.+|.|+| .|.+|...++.++.+|++|++..+....+.....+...+      ++.+.+ ...|+|+.+++....   
T Consensus       139 ~gktvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~------~l~ell-~~aDiV~l~lP~t~~t~~  210 (526)
T PRK13581        139 YGKTLGIIG-LGRIGSEVAKRAKAFGMKVIAYDPYISPERAAQLGVELV------SLDELL-ARADFITLHTPLTPETRG  210 (526)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEE------cHHHHH-hhCCEEEEccCCChHhhc
Confidence            478999999 599999999999999999999876544344455555322      223322 347888888875421   


Q ss_pred             -H-HHHHhcccCCcEEEEeccC
Q 021831          251 -E-RLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       251 -~-~~~~~~l~~~G~~v~~g~~  270 (307)
                       + ...+..|+++..+|.++-.
T Consensus       211 li~~~~l~~mk~ga~lIN~aRG  232 (526)
T PRK13581        211 LIGAEELAKMKPGVRIINCARG  232 (526)
T ss_pred             CcCHHHHhcCCCCeEEEECCCC
Confidence             1 3466778888888887754

>PRK08317 hypothetical protein; Provisional

Probab=93.99  E-value=0.4  Score=40.74  Aligned_cols=98  Identities=21%  Similarity=0.239  Sum_probs=61.2

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCcc-HHHHHHc----CCc-eEEeCCChhHHHHhcCCcc
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKS-IDRVLAA----GAE-QAVDYSSKDIELAIKGKFD  239 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G--~~Vi~~~~~~~-~~~~~~~----g~~-~v~~~~~~~~~~~~~~~~d  239 (307)
                      ....+.++++||-+|. | .|..+..+++..+  .+++++..+.. .+.+++.    +.. .+...+.... ....+.||
T Consensus        13 ~~~~~~~~~~vLdiG~-G-~G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D   89 (241)
T PRK08317         13 ELLAVQPGDRVLDVGC-G-PGNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGL-PFPDGSFD   89 (241)
T ss_pred             HHcCCCCCCEEEEeCC-C-CCHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccC-CCCCCCce
Confidence            4667889999999994 4 4888889998773  58888865543 3444332    111 1111111111 01124699


Q ss_pred             EEEECC-----CC-hhhHHHHHhcccCCcEEEEec
Q 021831          240 AVLDTI-----GA-PETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       240 vvid~~-----g~-~~~~~~~~~~l~~~G~~v~~g  268 (307)
                      +|+...     .+ ...+..+.++|+++|.++...
T Consensus        90 ~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  124 (241)
T PRK08317         90 AVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD  124 (241)
T ss_pred             EEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence            887642     22 236788899999999998765

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=93.98  E-value=0.15  Score=44.27  Aligned_cols=101  Identities=21%  Similarity=0.272  Sum_probs=63.3

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEE-eCCccHHH----HHHcCCceEE---eCCC--hhHHHHhc
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSAT-CGSKSIDR----VLAAGAEQAV---DYSS--KDIELAIK  235 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~-~~~~~~~~----~~~~g~~~v~---~~~~--~~~~~~~~  235 (307)
                      ...+++||++|+=.|  .+.|.+...+++..|-  +|+.. .+.++.+.    .+..|....+   ..+-  .-+.+.+.
T Consensus        34 ~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~~~~~~  111 (247)
T PF08704_consen   34 MRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGFDEELE  111 (247)
T ss_dssp             HHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG--STT-T
T ss_pred             HHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceeccccccccc
Confidence            478999999999988  4568888888887763  88888 44444333    3455654222   2221  11212223


Q ss_pred             CCccEEEECCCCh-hhHHHHHhcc-cCCcEEEEeccC
Q 021831          236 GKFDAVLDTIGAP-ETERLGLNFL-KRGGHYMTLHGE  270 (307)
Q Consensus       236 ~~~dvvid~~g~~-~~~~~~~~~l-~~~G~~v~~g~~  270 (307)
                      ..+|.||==.+.+ ..+..+.+.| ++||+++.+...
T Consensus       112 ~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP~  148 (247)
T PF08704_consen  112 SDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSPC  148 (247)
T ss_dssp             TSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEESS
T ss_pred             CcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCC
Confidence            5689887777765 5899999999 899999998654

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=93.93  E-value=0.61  Score=40.58  Aligned_cols=93  Identities=23%  Similarity=0.274  Sum_probs=58.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHH----HHcCCc---eEEeCCChhHHHHhcCCccEEEEC
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRV----LAAGAE---QAVDYSSKDIELAIKGKFDAVLDT  244 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~----~~~g~~---~v~~~~~~~~~~~~~~~~dvvid~  244 (307)
                      .++.+||=.|  ++.|..+..+++. |.+|+++..+.+ .+.+    .+.|..   .++..+..++.....+.||+|+..
T Consensus        43 ~~~~~vLDiG--cG~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d~~~l~~~~~~~fD~V~~~  119 (255)
T PRK11036         43 PRPLRVLDAG--GGEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAAQDIAQHLETPVDLILFH  119 (255)
T ss_pred             CCCCEEEEeC--CCchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEcCHHHHhhhcCCCCCEEEeh
Confidence            4567888888  5678888888875 889999865543 3333    333432   233333233332233579999864


Q ss_pred             C-----CC-hhhHHHHHhcccCCcEEEEec
Q 021831          245 I-----GA-PETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       245 ~-----g~-~~~~~~~~~~l~~~G~~v~~g  268 (307)
                      .     .. ...+..+.+.|+|||.++.+-
T Consensus       120 ~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~  149 (255)
T PRK11036        120 AVLEWVADPKSVLQTLWSVLRPGGALSLMF  149 (255)
T ss_pred             hHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            3     22 235788899999999997653

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=93.92  E-value=0.45  Score=40.96  Aligned_cols=99  Identities=16%  Similarity=0.180  Sum_probs=61.4

Q ss_pred             HHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCcc-HHH----HHHcCCce---EEeCCChhHHHHh-
Q 021831          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKS-IDR----VLAAGAEQ---AVDYSSKDIELAI-  234 (307)
Q Consensus       166 l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G--~~Vi~~~~~~~-~~~----~~~~g~~~---v~~~~~~~~~~~~-  234 (307)
                      +....+..+.++||-+|  +.+|..++.+++..+  .+|+++..+++ .+.    +++.|..+   ++..+..+....+ 
T Consensus        60 L~~l~~~~~~~~vLEiG--t~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gda~~~L~~l~  137 (234)
T PLN02781         60 LSMLVKIMNAKNTLEIG--VFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSDALSALDQLL  137 (234)
T ss_pred             HHHHHHHhCCCEEEEec--CcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHH
Confidence            33455667788999998  467777777777653  48888855443 333    34556432   2333323332322 


Q ss_pred             ----cCCccEEEECCC---ChhhHHHHHhcccCCcEEEE
Q 021831          235 ----KGKFDAVLDTIG---APETERLGLNFLKRGGHYMT  266 (307)
Q Consensus       235 ----~~~~dvvid~~g---~~~~~~~~~~~l~~~G~~v~  266 (307)
                          .+.||+||--..   -...+..+++++++||.++.
T Consensus       138 ~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~  176 (234)
T PLN02781        138 NNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAF  176 (234)
T ss_pred             hCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence                247998875432   13467788999999998885

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=93.91  E-value=0.15  Score=46.57  Aligned_cols=89  Identities=18%  Similarity=0.215  Sum_probs=55.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCE---EEEEeCCccHHH-HHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhHH
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCH---VSATCGSKSIDR-VLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETER  252 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~---Vi~~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~~  252 (307)
                      +|+|.||+|.+|...++++..++..   +..+.+.+.... +...+.+.++...+   .+.+ .++|++|.|+|...+..
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~---~~~~-~~~D~v~~a~g~~~s~~   76 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFKGKELEVNEAK---IESF-EGIDIALFSAGGSVSKE   76 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeCCeeEEEEeCC---hHHh-cCCCEEEECCCHHHHHH
Confidence            4889999999999999999886553   333334332211 12223332222111   1122 46999999999986666


Q ss_pred             HHHhcccCCcEEEEecc
Q 021831          253 LGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       253 ~~~~~l~~~G~~v~~g~  269 (307)
                      .+-..++.|-++|+.+.
T Consensus        77 ~a~~~~~~G~~VID~ss   93 (339)
T TIGR01296        77 FAPKAAKCGAIVIDNTS   93 (339)
T ss_pred             HHHHHHHCCCEEEECCH
Confidence            66666677767777664

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=93.88  E-value=0.61  Score=39.77  Aligned_cols=90  Identities=12%  Similarity=0.103  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--HHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhH
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE  251 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~  251 (307)
                      .+.+|||+|| |.++.-=+..+...|++|.+++..-.  ...+...+.-.... .  .+.+..-.++++||-|+.+. ..
T Consensus        24 ~~~~VLVVGG-G~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~~~-r--~~~~~dl~g~~LViaATdD~-~v   98 (223)
T PRK05562         24 NKIKVLIIGG-GKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYGNLKLIK-G--NYDKEFIKDKHLIVIATDDE-KL   98 (223)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEEEe-C--CCChHHhCCCcEEEECCCCH-HH
Confidence            4789999996 99998878888889999888865533  22233333322222 1  11111125699999999998 44


Q ss_pred             HHHHhcc-cCCcEEEEec
Q 021831          252 RLGLNFL-KRGGHYMTLH  268 (307)
Q Consensus       252 ~~~~~~l-~~~G~~v~~g  268 (307)
                      +..+... +..+.++.+.
T Consensus        99 N~~I~~~a~~~~~lvn~v  116 (223)
T PRK05562         99 NNKIRKHCDRLYKLYIDC  116 (223)
T ss_pred             HHHHHHHHHHcCCeEEEc
Confidence            5444433 3445544443

>PRK04148 hypothetical protein; Provisional

Probab=93.86  E-value=0.48  Score=36.96  Aligned_cols=85  Identities=16%  Similarity=0.203  Sum_probs=52.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEe-CCChhHHHHhcCCccEEEECCCCh
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVD-YSSKDIELAIKGKFDAVLDTIGAP  248 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~-~~~~~~~~~~~~~~dvvid~~g~~  248 (307)
                      ...++.+++++| .| .|...+..+..+|..|+++..++ ..+.+++.+.+.+.+ .-++++.  +-+++|++...-...
T Consensus        13 ~~~~~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~--~y~~a~liysirpp~   88 (134)
T PRK04148         13 EKGKNKKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLE--IYKNAKLIYSIRPPR   88 (134)
T ss_pred             ccccCCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCHH--HHhcCCEEEEeCCCH
Confidence            334578999999 47 88766666668899999996554 455566666543322 1111211  124677887777776


Q ss_pred             hhHHHHHhccc
Q 021831          249 ETERLGLNFLK  259 (307)
Q Consensus       249 ~~~~~~~~~l~  259 (307)
                      +....++++-+
T Consensus        89 el~~~~~~la~   99 (134)
T PRK04148         89 DLQPFILELAK   99 (134)
T ss_pred             HHHHHHHHHHH
Confidence            55555554443

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=93.85  E-value=0.41  Score=43.07  Aligned_cols=74  Identities=20%  Similarity=0.226  Sum_probs=47.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH---HHHc-CC---ceEE--eCCChhHHHHhcCCccEEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR---VLAA-GA---EQAV--DYSSKDIELAIKGKFDAVLD  243 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~---~~~~-g~---~~v~--~~~~~~~~~~~~~~~dvvid  243 (307)
                      .+.++||+||+|.+|..++..+...|.+|+++.++.. ...   +... +.   .+.+  |..+.+..+....++|+||.
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   83 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH   83 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence            4689999999999999999999889999887754432 211   1111 11   1222  33333322222246899999


Q ss_pred             CCCC
Q 021831          244 TIGA  247 (307)
Q Consensus       244 ~~g~  247 (307)
                      +++.
T Consensus        84 ~A~~   87 (325)
T PLN02989         84 TASP   87 (325)
T ss_pred             eCCC
Confidence            9873

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=93.84  E-value=0.47  Score=42.94  Aligned_cols=89  Identities=18%  Similarity=0.138  Sum_probs=61.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhH--
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE--  251 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~--  251 (307)
                      .|.++-|+| .|.+|+++++.++..|++|+.-.+....+..++.++.++      ++.+.+ ...|++.-.++....-  
T Consensus       145 ~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~------~l~ell-~~sDii~l~~Plt~~T~h  216 (324)
T COG1052         145 RGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYV------DLDELL-AESDIISLHCPLTPETRH  216 (324)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCChHHHhhcCceec------cHHHHH-HhCCEEEEeCCCChHHhh
Confidence            489999999 699999999999999999999877765444445554433      122222 3478877766643221  


Q ss_pred             ---HHHHhcccCCcEEEEeccC
Q 021831          252 ---RLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       252 ---~~~~~~l~~~G~~v~~g~~  270 (307)
                         ...+..|++++.+|-++-.
T Consensus       217 Lin~~~l~~mk~ga~lVNtaRG  238 (324)
T COG1052         217 LINAEELAKMKPGAILVNTARG  238 (324)
T ss_pred             hcCHHHHHhCCCCeEEEECCCc
Confidence               3456778888888887744

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=93.81  E-value=0.3  Score=41.50  Aligned_cols=98  Identities=22%  Similarity=0.436  Sum_probs=60.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CccHHH---HHHcCC-ceE--E--eCCC-hhHHHHhc------CCc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSIDR---VLAAGA-EQA--V--DYSS-KDIELAIK------GKF  238 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~~~~---~~~~g~-~~v--~--~~~~-~~~~~~~~------~~~  238 (307)
                      |.++++.|+.|++|+.....+...|+++.++.. .++.+.   +++... ..+  +  |..+ .+......      +..
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~i   84 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTI   84 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCce
Confidence            889999999999999999999999998888844 444333   222221 111  1  1111 12222211      678


Q ss_pred             cEEEECCCCh-----------------hhHHHHHhcc-----cCCcEEEEeccCcc
Q 021831          239 DAVLDTIGAP-----------------ETERLGLNFL-----KRGGHYMTLHGETA  272 (307)
Q Consensus       239 dvvid~~g~~-----------------~~~~~~~~~l-----~~~G~~v~~g~~~~  272 (307)
                      |++||..|-.                 .....++..+     .+||.+|-++...+
T Consensus        85 DIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~G  140 (261)
T KOG4169|consen   85 DILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAG  140 (261)
T ss_pred             EEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccc
Confidence            9999988841                 0112344444     36789998886654

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=93.79  E-value=0.43  Score=36.37  Aligned_cols=92  Identities=18%  Similarity=0.221  Sum_probs=57.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCcc--HHHHHHcCC--ceE--EeCCChhHHHHhcCCccEEEECCCChh
Q 021831          177 RLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKS--IDRVLAAGA--EQA--VDYSSKDIELAIKGKFDAVLDTIGAPE  249 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~~~--~~~~~~~g~--~~v--~~~~~~~~~~~~~~~~dvvid~~g~~~  249 (307)
                      ++.|.|++|.+|...+...+.. ++++.++....+  .+.+...+.  .++  .++...++..   ...|+||-|++...
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~DvV~~~~~~~~   77 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELEPEDFEE---LAVDIVFLALPHGV   77 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccccccccccccCChhh---cCCCEEEEcCCcHH
Confidence            4789998899999888888774 778877733221  112222221  111  1222233331   36899999999885


Q ss_pred             hHHH---HHhcccCCcEEEEeccCc
Q 021831          250 TERL---GLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       250 ~~~~---~~~~l~~~G~~v~~g~~~  271 (307)
                      ....   +...+++|..++.+++.-
T Consensus        78 ~~~~~~~~~~~~~~g~~viD~s~~~  102 (122)
T smart00859       78 SKEIAPLLPKAAEAGVKVIDLSSAF  102 (122)
T ss_pred             HHHHHHHHHhhhcCCCEEEECCccc
Confidence            5442   445567889999999764

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=93.77  E-value=0.26  Score=43.99  Aligned_cols=88  Identities=17%  Similarity=0.283  Sum_probs=56.0

Q ss_pred             CEEEEEcCCchHHHH-HHHHHHHcCCEEEEEeCCcc----HHHHHHcCCceEEeCCChhHHHHhc----CCccEEEECCC
Q 021831          176 QRLLVLGGGGAVGFA-AVQFSVASGCHVSATCGSKS----IDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIG  246 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~-~~~~a~~~G~~Vi~~~~~~~----~~~~~~~g~~~v~~~~~~~~~~~~~----~~~dvvid~~g  246 (307)
                      -++.|+| +|.+|.. +..+.+..++++.++++.+.    +..++++|....+    .++.+.+.    ..+|+||++++
T Consensus         5 lrVAIIG-tG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~----~~ie~LL~~~~~~dIDiVf~AT~   79 (302)
T PRK08300          5 LKVAIIG-SGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA----EGIDGLLAMPEFDDIDIVFDATS   79 (302)
T ss_pred             CeEEEEc-CcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc----CCHHHHHhCcCCCCCCEEEECCC
Confidence            4689999 7999987 44555545678887764322    2446677754332    12333332    46999999999


Q ss_pred             ChhhHHHHHhcccCCcEEEEec
Q 021831          247 APETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       247 ~~~~~~~~~~~l~~~G~~v~~g  268 (307)
                      .......+..+++.|-++++..
T Consensus        80 a~~H~e~a~~a~eaGk~VID~s  101 (302)
T PRK08300         80 AGAHVRHAAKLREAGIRAIDLT  101 (302)
T ss_pred             HHHHHHHHHHHHHcCCeEEECC
Confidence            9866666666666655555544

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.76  E-value=0.7  Score=40.93  Aligned_cols=95  Identities=15%  Similarity=0.233  Sum_probs=67.2

Q ss_pred             cccchHHHHHHHHHHHcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCccHHHHHHcCCceEEeCCChhHH
Q 021831          154 AIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC-GSKSIDRVLAAGAEQAVDYSSKDIE  231 (307)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~-~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~-~~~~~~~~~~~g~~~v~~~~~~~~~  231 (307)
                      ..++........++ ..++ -.|.+++|+|.+..+|.=.+.++...++.|+..- +..+                   +.
T Consensus       134 ~~PcTp~avi~lL~-~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~-------------------l~  193 (287)
T PRK14173        134 LEPCTPAGVVRLLK-HYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQD-------------------LP  193 (287)
T ss_pred             CCCCCHHHHHHHHH-HcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCC-------------------HH
Confidence            45666666666665 3443 3699999999999999999999999999887552 2221                   22


Q ss_pred             HHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       232 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +.. ...|+||-++|.+..+  --..+++|..+|.+|-..
T Consensus       194 ~~~-~~ADIvIsAvGkp~~i--~~~~vk~GavVIDVGin~  230 (287)
T PRK14173        194 AVT-RRADVLVVAVGRPHLI--TPEMVRPGAVVVDVGINR  230 (287)
T ss_pred             HHH-hhCCEEEEecCCcCcc--CHHHcCCCCEEEEccCcc
Confidence            221 3489999999988443  246788999999988654

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=93.72  E-value=0.37  Score=44.02  Aligned_cols=74  Identities=20%  Similarity=0.215  Sum_probs=47.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHc--CC-ceEE--eCCChh-HHHHhcCCccEEEEC
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAA--GA-EQAV--DYSSKD-IELAIKGKFDAVLDT  244 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~--g~-~~v~--~~~~~~-~~~~~~~~~dvvid~  244 (307)
                      ..+.+|||+|++|-+|..+++.+...|.+|+++.+.... .. ...+  +. -.++  |..+.+ +.+.+ .++|.||.+
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~-~~~d~Vih~   86 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAV-KGCDGVFHV   86 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHH-cCCCEEEEC
Confidence            356799999999999999999999899999988665332 11 2221  11 1222  222322 32323 468999998


Q ss_pred             CCC
Q 021831          245 IGA  247 (307)
Q Consensus       245 ~g~  247 (307)
                      .+.
T Consensus        87 A~~   89 (353)
T PLN02896         87 AAS   89 (353)
T ss_pred             Ccc
Confidence            763

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.70  E-value=0.77  Score=40.63  Aligned_cols=96  Identities=18%  Similarity=0.272  Sum_probs=68.2

Q ss_pred             cccchHHHHHHHHHHHcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHH
Q 021831          154 AIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (307)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~-~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (307)
                      ..++........++. .++ -.|.+++|+|.+..+|.-.+.++...++.|+..-+ .                 ..++.+
T Consensus       137 ~~PcTp~av~~lL~~-~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs-~-----------------t~~l~~  197 (284)
T PRK14190        137 FLPCTPHGILELLKE-YNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHS-K-----------------TKNLAE  197 (284)
T ss_pred             CCCCCHHHHHHHHHH-cCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeC-C-----------------chhHHH
Confidence            456666666666653 333 47999999999999999999999999998876421 1                 112222


Q ss_pred             HhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       233 ~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .+ ...|+||-++|.+..+.  -..+++|..+|.+|-..
T Consensus       198 ~~-~~ADIvI~AvG~p~~i~--~~~ik~gavVIDvGi~~  233 (284)
T PRK14190        198 LT-KQADILIVAVGKPKLIT--ADMVKEGAVVIDVGVNR  233 (284)
T ss_pred             HH-HhCCEEEEecCCCCcCC--HHHcCCCCEEEEeeccc
Confidence            22 34899999999884322  45679999999999664

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=93.70  E-value=0.47  Score=40.24  Aligned_cols=94  Identities=17%  Similarity=0.117  Sum_probs=57.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHH-HHcCCc-----------------eEEeCCChhHHHH
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRV-LAAGAE-----------------QAVDYSSKDIELA  233 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~-~~~g~~-----------------~v~~~~~~~~~~~  233 (307)
                      .++.+||+.|  .+.|.-++-+|. +|..|+++.-+.. .+.+ .+.+..                 .++..+-.++...
T Consensus        33 ~~~~rvLd~G--CG~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  109 (213)
T TIGR03840        33 PAGARVFVPL--CGKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA  109 (213)
T ss_pred             CCCCeEEEeC--CCchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence            5778999999  457888888875 6999999965543 3332 222221                 0011110111111


Q ss_pred             hcCCccEEEECCCC--------hhhHHHHHhcccCCcEEEEecc
Q 021831          234 IKGKFDAVLDTIGA--------PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       234 ~~~~~dvvid~~g~--------~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      ..+.||.|+|+..-        ...+..+.++|+|||+++..+.
T Consensus       110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~  153 (213)
T TIGR03840       110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL  153 (213)
T ss_pred             cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence            12469999997531        2357789999999998666654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=93.70  E-value=0.46  Score=43.33  Aligned_cols=74  Identities=19%  Similarity=0.171  Sum_probs=48.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HHHHHc--C--Cc-eEEeCCCh-hHHHHhcC-CccEEEEC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAA--G--AE-QAVDYSSK-DIELAIKG-KFDAVLDT  244 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~~~~~--g--~~-~v~~~~~~-~~~~~~~~-~~dvvid~  244 (307)
                      .|.+|||.||+|.+|..+++.+...|.+|+++.+....  .....+  +  .. ...|..+. ++.+.+.+ ++|+||.+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~   82 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL   82 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence            46899999999999999999999999999888654331  111112  1  11 12233333 33343433 68999999


Q ss_pred             CCC
Q 021831          245 IGA  247 (307)
Q Consensus       245 ~g~  247 (307)
                      .+.
T Consensus        83 A~~   85 (349)
T TIGR02622        83 AAQ   85 (349)
T ss_pred             Ccc
Confidence            873

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=93.69  E-value=0.43  Score=40.99  Aligned_cols=131  Identities=21%  Similarity=0.298  Sum_probs=74.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc---HHHHHH-cC-----CceE--EeCCC-hh-HH---HHhc--
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS---IDRVLA-AG-----AEQA--VDYSS-KD-IE---LAIK--  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~---~~~~~~-~g-----~~~v--~~~~~-~~-~~---~~~~--  235 (307)
                      .+..+||.|+++++|++++..+...|++|+.+.+...   .+.+.+ ..     ....  .|.++ .. ..   +.+.  
T Consensus         4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~   83 (251)
T COG1028           4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE   83 (251)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence            4688999999999999998888899999877755432   122211 11     1111  34443 22 11   1111  


Q ss_pred             -CCccEEEECCCChh----h----------------------HHHHHhcccCCcEEEEeccCccccccccc-ceechhHH
Q 021831          236 -GKFDAVLDTIGAPE----T----------------------ERLGLNFLKRGGHYMTLHGETAALADHYG-LALGLPIA  287 (307)
Q Consensus       236 -~~~dvvid~~g~~~----~----------------------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~  287 (307)
                       ++.|+++++.|...    .                      ...+...+... +++.++..... ..... ..++....
T Consensus        84 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~Iv~isS~~~~-~~~~~~~~Y~~sK~  161 (251)
T COG1028          84 FGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ-RIVNISSVAGL-GGPPGQAAYAASKA  161 (251)
T ss_pred             cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC-eEEEECCchhc-CCCCCcchHHHHHH
Confidence             57999999988521    1                      02223333444 88888876554 33332 44555555


Q ss_pred             HHHHHHHHHhh-hhcccccc
Q 021831          288 TTVLLKKRMQT-WYSYGIGC  306 (307)
Q Consensus       288 ~~~~~~~~~~~-~~~~~i~~  306 (307)
                      +...+...+.. +..+||++
T Consensus       162 al~~~~~~l~~e~~~~gi~v  181 (251)
T COG1028         162 ALIGLTKALALELAPRGIRV  181 (251)
T ss_pred             HHHHHHHHHHHHHhhhCcEE
Confidence            55555555443 34556654

>PLN02214 cinnamoyl-CoA reductase

Probab=93.65  E-value=0.4  Score=43.65  Aligned_cols=73  Identities=21%  Similarity=0.265  Sum_probs=47.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH---HHHHHcC---C-ceEE--eCCChh-HHHHhcCCccEEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAG---A-EQAV--DYSSKD-IELAIKGKFDAVLD  243 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~---~~~~~~g---~-~~v~--~~~~~~-~~~~~~~~~dvvid  243 (307)
                      ++.+|||+||+|-+|...+..+...|.+|+++.+..+.   ..+..+.   . ..++  |..+.. +.+.+ .++|+||.
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~d~Vih   87 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAI-DGCDGVFH   87 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHH-hcCCEEEE
Confidence            56789999999999999999998999999988765432   1122221   1 1122  333322 33333 56999999


Q ss_pred             CCCC
Q 021831          244 TIGA  247 (307)
Q Consensus       244 ~~g~  247 (307)
                      +.+.
T Consensus        88 ~A~~   91 (342)
T PLN02214         88 TASP   91 (342)
T ss_pred             ecCC
Confidence            9864

>PRK04457 spermidine synthase; Provisional

Probab=93.65  E-value=0.93  Score=39.74  Aligned_cols=92  Identities=15%  Similarity=0.067  Sum_probs=57.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeC-CccHHHHHH-cCC----c--eEEeCCChhHHHHhcCCccEEE-
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCG-SKSIDRVLA-AGA----E--QAVDYSSKDIELAIKGKFDAVL-  242 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~-~~~~~~~~~-~g~----~--~v~~~~~~~~~~~~~~~~dvvi-  242 (307)
                      .++.+||++|.  +.|..+..+++... ++++++-- .+-.+.+++ ++.    .  .++..+..++.....+.||+|+ 
T Consensus        65 ~~~~~vL~IG~--G~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~Da~~~l~~~~~~yD~I~~  142 (262)
T PRK04457         65 PRPQHILQIGL--GGGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEADGAEYIAVHRHSTDVILV  142 (262)
T ss_pred             CCCCEEEEECC--CHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEECCHHHHHHhCCCCCCEEEE
Confidence            45678999994  35778888877764 58888844 444444443 221    1  3333333344443335799886 


Q ss_pred             ECCCC---------hhhHHHHHhcccCCcEEEE
Q 021831          243 DTIGA---------PETERLGLNFLKRGGHYMT  266 (307)
Q Consensus       243 d~~g~---------~~~~~~~~~~l~~~G~~v~  266 (307)
                      |...+         ...+..+.+.|+++|.++.
T Consensus       143 D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvi  175 (262)
T PRK04457        143 DGFDGEGIIDALCTQPFFDDCRNALSSDGIFVV  175 (262)
T ss_pred             eCCCCCCCccccCcHHHHHHHHHhcCCCcEEEE
Confidence            33211         3467888899999999987

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.64  E-value=0.91  Score=40.04  Aligned_cols=96  Identities=19%  Similarity=0.291  Sum_probs=68.1

Q ss_pred             cccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCccHHHHHHcCCceEEeCCChhHHH
Q 021831          154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC-GSKSIDRVLAAGAEQAVDYSSKDIEL  232 (307)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (307)
                      ..++.....+..++...---.|.+++|.|-+..+|.=.+.++...||.|+..- ++.                   ++.+
T Consensus       137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~-------------------~l~~  197 (278)
T PRK14172        137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTK-------------------NLKE  197 (278)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCC-------------------CHHH
Confidence            45666666666665332224799999999999999999999999999876652 222                   1222


Q ss_pred             HhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       233 ~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .. ...|++|-++|.+..+.  -..+++|..+|.+|--.
T Consensus       198 ~~-~~ADIvIsAvGkp~~i~--~~~ik~gavVIDvGin~  233 (278)
T PRK14172        198 VC-KKADILVVAIGRPKFID--EEYVKEGAIVIDVGTSS  233 (278)
T ss_pred             HH-hhCCEEEEcCCCcCccC--HHHcCCCcEEEEeeccc
Confidence            11 34899999999884433  35689999999998644

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=93.64  E-value=1  Score=40.18  Aligned_cols=210  Identities=20%  Similarity=0.184  Sum_probs=112.1

Q ss_pred             CCeEEEEEeeeecCh-hhHHHHhCCCccccCCCCCcccc-cceEEEEEEec-CCCCCCCCCCEEEEecCCCCCCCccee-
Q 021831           56 PNEVLVRTRAVSINP-LDTRMRSGYGRSIFEPLLPLILG-RDISGEVAAVG-ASVRSLTVGQEVFGALHPTAVRGTYAD-  131 (307)
Q Consensus        56 ~~eVlV~v~~~~i~~-~D~~~~~g~~~~~~~~~~p~~~G-~e~~G~V~~~G-~~v~~~~~Gd~V~~~~~~~~~~g~~~~-  131 (307)
                      -.||+|+.-+..-++ +|-.+..-. ..... +..-+.+ .|.+=.|.+-- +...-|+.|+..+.+.+.-.- ....+ 
T Consensus        30 GheVlVe~gAG~gsg~~D~~Y~~aG-A~Iv~-ta~~vw~~~dmvvKvKEP~~~EY~ylregqiLftyLHLA~~-~~lt~~  106 (371)
T COG0686          30 GHEVLVETGAGAGSGFDDDDYEAAG-AKIVA-TAAEVWAEADMVVKVKEPLPSEYPYLREGQILFTYLHLAAS-PELTEA  106 (371)
T ss_pred             CcEEEEecCCcCCCCCChHHHHHcC-CEEec-CHHHhhcccceEEEecCCChhhhhhhcCCcEEEEEeeecCC-hHHHHH
Confidence            358999988765544 333332221 11110 1111233 55554444421 233448899988887653210 00000 


Q ss_pred             ----EEEecCCceeeCCCC-----CChhhhccccchHHHHHHHHHHHc----------CCCCCCEEEEEcCCchHHHHHH
Q 021831          132 ----YAVLSEDELTPKPVS-----VTHADASAIPFAALTAWRALKCAA----------RMSEGQRLLVLGGGGAVGFAAV  192 (307)
Q Consensus       132 ----~~~~~~~~~~~ip~~-----~~~~~aa~~~~~~~ta~~~l~~~~----------~~~~g~~VlI~Ga~g~~G~~~~  192 (307)
                          -+..=+...+..|++     -++.+.+.-...-.-|++.-+...          .+. ..+|.|+|+ |.+|.-++
T Consensus       107 l~~~gvtaIayETV~~~~g~lPlLaPMSeVAGrla~q~Ga~~lek~~GG~GvllgGvpGV~-~~kv~iiGG-GvvgtnaA  184 (371)
T COG0686         107 LLKSGVTAIAYETVQLPDGNLPLLAPMSEVAGRLAAQAGAYYLEKTNGGKGVLLGGVPGVL-PAKVVVLGG-GVVGTNAA  184 (371)
T ss_pred             HHHcCcceEEEEEEEcCCCCCcccchHHHHhhhHHHHHHHHHHHhccCCceeEecCCCCCC-CccEEEECC-ccccchHH
Confidence                000000112223331     122333333334445555433222          223 346777785 99999999


Q ss_pred             HHHHHcCCEEEEEeC-CccHHHHHH-cCCc-eEEeCCChhHHHHhcCCccEEEECC--CCh----hhHHHHHhcccCCcE
Q 021831          193 QFSVASGCHVSATCG-SKSIDRVLA-AGAE-QAVDYSSKDIELAIKGKFDAVLDTI--GAP----ETERLGLNFLKRGGH  263 (307)
Q Consensus       193 ~~a~~~G~~Vi~~~~-~~~~~~~~~-~g~~-~v~~~~~~~~~~~~~~~~dvvid~~--g~~----~~~~~~~~~l~~~G~  263 (307)
                      .+|-.+|++|..... .++++.+.. ++.. +++..+...+.+.+ .+.|++|.++  ++.    -..++..+.|+||+.
T Consensus       185 kiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v-~~aDlvIgaVLIpgakaPkLvt~e~vk~MkpGsV  263 (371)
T COG0686         185 KIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAV-KKADLVIGAVLIPGAKAPKLVTREMVKQMKPGSV  263 (371)
T ss_pred             HHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHh-hhccEEEEEEEecCCCCceehhHHHHHhcCCCcE
Confidence            999999999888854 466666654 3333 44444444555554 4589999874  221    145778999999999


Q ss_pred             EEEeccCc
Q 021831          264 YMTLHGET  271 (307)
Q Consensus       264 ~v~~g~~~  271 (307)
                      +|++.-..
T Consensus       264 ivDVAiDq  271 (371)
T COG0686         264 IVDVAIDQ  271 (371)
T ss_pred             EEEEEEcC
Confidence            99887553

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=93.58  E-value=0.21  Score=39.58  Aligned_cols=91  Identities=19%  Similarity=0.250  Sum_probs=57.3

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceE-------EeCCCh-hHHHHhcCCccEEEECCCCh-
Q 021831          178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQA-------VDYSSK-DIELAIKGKFDAVLDTIGAP-  248 (307)
Q Consensus       178 VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v-------~~~~~~-~~~~~~~~~~dvvid~~g~~-  248 (307)
                      |+|.|+ |.+|.+.+..++..|.+|..+.+..+.+..++.|....       +..... .......+.+|+||-|+-.. 
T Consensus         1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa~~   79 (151)
T PF02558_consen    1 ILIIGA-GAIGSLYAARLAQAGHDVTLVSRSPRLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVKAYQ   79 (151)
T ss_dssp             EEEEST-SHHHHHHHHHHHHTTCEEEEEESHHHHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SSGGG
T ss_pred             CEEECc-CHHHHHHHHHHHHCCCceEEEEccccHHhhhheeEEEEecccceecccccccCcchhccCCCcEEEEEecccc
Confidence            689995 99999988888888999999988775555665553211       111110 00111125799999998765 


Q ss_pred             --hhHHHHHhcccCCcEEEEecc
Q 021831          249 --ETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       249 --~~~~~~~~~l~~~G~~v~~g~  269 (307)
                        ..+..+...+.++..++++..
T Consensus        80 ~~~~l~~l~~~~~~~t~iv~~qN  102 (151)
T PF02558_consen   80 LEQALQSLKPYLDPNTTIVSLQN  102 (151)
T ss_dssp             HHHHHHHHCTGEETTEEEEEESS
T ss_pred             hHHHHHHHhhccCCCcEEEEEeC
Confidence              234445556667777777764

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=93.51  E-value=0.21  Score=42.35  Aligned_cols=70  Identities=21%  Similarity=0.294  Sum_probs=48.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHH-H-HcCCc-eEEeCCChh-HHHHhc-CCccEEEECCCC
Q 021831          178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRV-L-AAGAE-QAVDYSSKD-IELAIK-GKFDAVLDTIGA  247 (307)
Q Consensus       178 VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~-~-~~g~~-~v~~~~~~~-~~~~~~-~~~dvvid~~g~  247 (307)
                      |||+||+|-+|..++..+...|..|+.+.+..+.... . ..... ...|..+.+ +.+.+. ..+|.||.+.+.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~   75 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAF   75 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeecc
Confidence            7999999999999999999999999888776554432 2 22221 223444433 333333 268999999886

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK08655 prephenate dehydrogenase; Provisional

Probab=93.49  E-value=0.74  Score=43.59  Aligned_cols=87  Identities=20%  Similarity=0.206  Sum_probs=53.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChh---hH
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE---TE  251 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~---~~  251 (307)
                      +|.|+||.|.+|.+.+..++..|.+|++..++...  +.+.++|.. .   . .+..+.+ ...|+||-|++...   .+
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~-~---~-~~~~e~~-~~aDvVIlavp~~~~~~vl   75 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVE-Y---A-NDNIDAA-KDADIVIISVPINVTEDVI   75 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCe-e---c-cCHHHHh-ccCCEEEEecCHHHHHHHH
Confidence            68999878999999999999999988887665433  334555642 1   1 1122222 34677777776541   22


Q ss_pred             HHHHhcccCCcEEEEecc
Q 021831          252 RLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       252 ~~~~~~l~~~G~~v~~g~  269 (307)
                      ..+...++++..++.++.
T Consensus        76 ~~l~~~l~~~~iViDvsS   93 (437)
T PRK08655         76 KEVAPHVKEGSLLMDVTS   93 (437)
T ss_pred             HHHHhhCCCCCEEEEccc
Confidence            333334455666666664

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase

Probab=93.48  E-value=0.73  Score=44.69  Aligned_cols=90  Identities=21%  Similarity=0.167  Sum_probs=60.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhH--
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE--  251 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~--  251 (307)
                      .|.+|.|+| .|.+|...++.++.+|++|++..+....+...+++...+     .++.+.+ ...|+|+-+++.....  
T Consensus       137 ~gktvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~-----~~l~ell-~~aDvV~l~lPlt~~T~~  209 (525)
T TIGR01327       137 YGKTLGVIG-LGRIGSIVAKRAKAFGMKVLAYDPYISPERAEQLGVELV-----DDLDELL-ARADFITVHTPLTPETRG  209 (525)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEc-----CCHHHHH-hhCCEEEEccCCChhhcc
Confidence            478999999 699999999999999999999876433344455554211     1233332 3478888887753211  


Q ss_pred             ---HHHHhcccCCcEEEEeccC
Q 021831          252 ---RLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       252 ---~~~~~~l~~~G~~v~~g~~  270 (307)
                         ...+..|+++..+|.++-.
T Consensus       210 li~~~~l~~mk~ga~lIN~aRG  231 (525)
T TIGR01327       210 LIGAEELAKMKKGVIIVNCARG  231 (525)
T ss_pred             CcCHHHHhcCCCCeEEEEcCCC
Confidence               3456677888877777744

This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=93.48  E-value=0.78  Score=38.14  Aligned_cols=114  Identities=12%  Similarity=0.137  Sum_probs=70.8

Q ss_pred             cccchHHHHHHHHHHHcCC----------CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEE
Q 021831          154 AIPFAALTAWRALKCAARM----------SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAV  223 (307)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~----------~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~  223 (307)
                      ..++........++. .++          -.|.+++|+|-+..+|.=.+.++...||.|+....+.-..+.+.-.-.+-.
T Consensus        32 ~~PCTp~avi~lL~~-~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~~~~~~~~hs~  110 (197)
T cd01079          32 ILPCTPLAIVKILEF-LGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFTRGESIRHEK  110 (197)
T ss_pred             ccCCCHHHHHHHHHH-hCCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCccccccccccccccc
Confidence            456666666666653 322          469999999999999999999999999998866322111100000000000


Q ss_pred             e--CC-ChhHHHHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          224 D--YS-SKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       224 ~--~~-~~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      .  .+ +.+..+. ....|+||-++|.+.. .---..+++|..+|.+|..
T Consensus       111 t~~~~~~~~l~~~-~~~ADIVIsAvG~~~~-~i~~d~ik~GavVIDVGi~  158 (197)
T cd01079         111 HHVTDEEAMTLDC-LSQSDVVITGVPSPNY-KVPTELLKDGAICINFASI  158 (197)
T ss_pred             ccccchhhHHHHH-hhhCCEEEEccCCCCC-ccCHHHcCCCcEEEEcCCC
Confidence            0  00 0112222 2569999999999843 1225678999999999965

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>TIGR00417 speE spermidine synthase

Probab=93.47  E-value=0.74  Score=40.54  Aligned_cols=95  Identities=13%  Similarity=0.077  Sum_probs=52.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCcc-HHHHHHc----C------CceEEeCCChhHHHHhcCCccE
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDRVLAA----G------AEQAVDYSSKDIELAIKGKFDA  240 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~-~~~~~~~----g------~~~v~~~~~~~~~~~~~~~~dv  240 (307)
                      +..++||++|+  +.|..+..+++.... ++.++.-+.+ .+.+++.    +      .-.+...+...+.+...+.||+
T Consensus        71 ~~p~~VL~iG~--G~G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~~~~yDv  148 (270)
T TIGR00417        71 PNPKHVLVIGG--GDGGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADTENTFDV  148 (270)
T ss_pred             CCCCEEEEEcC--CchHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhCCCCccE
Confidence            34569999995  335566666666544 6766644333 2333321    1      0112222222233333357998


Q ss_pred             EEECCC----------ChhhHHHHHhcccCCcEEEEecc
Q 021831          241 VLDTIG----------APETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       241 vid~~g----------~~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      ||-...          ..+.+..+.+.|+++|.++....
T Consensus       149 Ii~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~~  187 (270)
T TIGR00417       149 IIVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQSE  187 (270)
T ss_pred             EEEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcCC
Confidence            875332          12345678899999999998743

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>PLN03139 formate dehydrogenase; Provisional

Probab=93.47  E-value=0.82  Score=42.44  Aligned_cols=89  Identities=19%  Similarity=0.218  Sum_probs=58.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhH-
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE-  251 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~-  251 (307)
                      .|.+|.|+| .|.+|+..++.++.+|++|++..+.. ..+...+.|...+     .++.+.+ ...|+|+.+++..... 
T Consensus       198 ~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell-~~sDvV~l~lPlt~~T~  270 (386)
T PLN03139        198 EGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFE-----EDLDAML-PKCDVVVINTPLTEKTR  270 (386)
T ss_pred             CCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceec-----CCHHHHH-hhCCEEEEeCCCCHHHH
Confidence            578999999 69999999999999999998876543 2233334443211     1233333 3478888777753221 


Q ss_pred             ----HHHHhcccCCcEEEEecc
Q 021831          252 ----RLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       252 ----~~~~~~l~~~G~~v~~g~  269 (307)
                          ...+..|+++..+|.++-
T Consensus       271 ~li~~~~l~~mk~ga~lIN~aR  292 (386)
T PLN03139        271 GMFNKERIAKMKKGVLIVNNAR  292 (386)
T ss_pred             HHhCHHHHhhCCCCeEEEECCC
Confidence                245667777777777764

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.45  E-value=1  Score=39.88  Aligned_cols=96  Identities=20%  Similarity=0.278  Sum_probs=68.6

Q ss_pred             ccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCccHHHHHHcCCceEEeCCChhHH
Q 021831          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKSIDRVLAAGAEQAVDYSSKDIE  231 (307)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~-~~~~~~~~~~~~g~~~v~~~~~~~~~  231 (307)
                      ...++.....+..++...---.|.+|+|.|-+..+|.=.+.++...+|.|+.. ...++                   +.
T Consensus       135 ~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~n-------------------l~  195 (282)
T PRK14166        135 GFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKD-------------------LS  195 (282)
T ss_pred             CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC-------------------HH
Confidence            34566666667677643322479999999999999999999999889988754 22222                   22


Q ss_pred             HHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       232 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      +.. ..+|++|-++|.+..+.  -..+++|..+|.+|--
T Consensus       196 ~~~-~~ADIvIsAvGkp~~i~--~~~vk~GavVIDvGin  231 (282)
T PRK14166        196 LYT-RQADLIIVAAGCVNLLR--SDMVKEGVIVVDVGIN  231 (282)
T ss_pred             HHH-hhCCEEEEcCCCcCccC--HHHcCCCCEEEEeccc
Confidence            211 34899999999884433  3578999999999954

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=93.44  E-value=0.42  Score=43.21  Aligned_cols=74  Identities=15%  Similarity=0.075  Sum_probs=46.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCcc-HHH-HHHcCC--ceEE--eCCChhHHHHhcCCccEEEECC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKS-IDR-VLAAGA--EQAV--DYSSKDIELAIKGKFDAVLDTI  245 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G--~~Vi~~~~~~~-~~~-~~~~g~--~~v~--~~~~~~~~~~~~~~~dvvid~~  245 (307)
                      .|.+|||+||+|.+|...++.+...|  .+|++..+... ... ...+..  ..++  |..+.+.......++|+||.+.
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A   82 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA   82 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence            36789999999999999888877765  57887765432 221 222221  1222  4444332222235699999988


Q ss_pred             CC
Q 021831          246 GA  247 (307)
Q Consensus       246 g~  247 (307)
                      |.
T Consensus        83 g~   84 (324)
T TIGR03589        83 AL   84 (324)
T ss_pred             cc
Confidence            74

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02476 O-methyltransferase

Probab=93.38  E-value=0.79  Score=40.51  Aligned_cols=99  Identities=14%  Similarity=0.189  Sum_probs=62.4

Q ss_pred             HHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCc-cHHH----HHHcCCceEEe---CCChhHHHHh-
Q 021831          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSK-SIDR----VLAAGAEQAVD---YSSKDIELAI-  234 (307)
Q Consensus       166 l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G--~~Vi~~~~~~-~~~~----~~~~g~~~v~~---~~~~~~~~~~-  234 (307)
                      +.......+..+||=+|  +.+|..++.+++.++  .+|+++-.++ ..+.    .++.|..+.++   .+..+..+.+ 
T Consensus       110 L~~L~~~~~ak~VLEIG--T~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~GdA~e~L~~l~  187 (278)
T PLN02476        110 LAMLVQILGAERCIEVG--VYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGLAAESLKSMI  187 (278)
T ss_pred             HHHHHHhcCCCeEEEec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHH
Confidence            34455667789999999  567888888888663  4777774443 3333    45566543333   2322333322 


Q ss_pred             ----cCCccEEEECCCC---hhhHHHHHhcccCCcEEEE
Q 021831          235 ----KGKFDAVLDTIGA---PETERLGLNFLKRGGHYMT  266 (307)
Q Consensus       235 ----~~~~dvvid~~g~---~~~~~~~~~~l~~~G~~v~  266 (307)
                          .+.||+||--...   ...++.++++|++||.++.
T Consensus       188 ~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~  226 (278)
T PLN02476        188 QNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVM  226 (278)
T ss_pred             hcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence                1479987654432   2467888999999999875

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=93.37  E-value=0.14  Score=45.43  Aligned_cols=81  Identities=21%  Similarity=0.313  Sum_probs=47.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCCh-hHHHHhcC-CccEEEECCCChh-----
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK-DIELAIKG-KFDAVLDTIGAPE-----  249 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~-~~dvvid~~g~~~-----  249 (307)
                      +|||+|++|.+|.+..+.++..|..++++.+.+             +|..+. .+.+.+.. .+|+||+|.+-..     
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~-------------~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~~ce   68 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRSD-------------LDLTDPEAVAKLLEAFKPDVVINCAAYTNVDACE   68 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTTC-------------S-TTSHHHHHHHHHHH--SEEEE------HHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCchh-------------cCCCCHHHHHHHHHHhCCCeEeccceeecHHhhh
Confidence            799999999999999999999888888885551             122222 22222222 5899999986420     


Q ss_pred             ------------hHHHHHhc-ccCCcEEEEeccC
Q 021831          250 ------------TERLGLNF-LKRGGHYMTLHGE  270 (307)
Q Consensus       250 ------------~~~~~~~~-l~~~G~~v~~g~~  270 (307)
                                  ....+.+. ...+.+++.++..
T Consensus        69 ~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd  102 (286)
T PF04321_consen   69 KNPEEAYAINVDATKNLAEACKERGARLIHISTD  102 (286)
T ss_dssp             HSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEG
T ss_pred             hChhhhHHHhhHHHHHHHHHHHHcCCcEEEeecc
Confidence                        11233333 3467788888743

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=93.37  E-value=0.27  Score=45.84  Aligned_cols=72  Identities=22%  Similarity=0.429  Sum_probs=49.9

Q ss_pred             CCCEEEEEcC----------------CchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCC-hhHHHHhc-
Q 021831          174 EGQRLLVLGG----------------GGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSS-KDIELAIK-  235 (307)
Q Consensus       174 ~g~~VlI~Ga----------------~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~~-  235 (307)
                      .|.++||.||                +|.+|.+.++.+..+|++|+.+.+......  ..+. ..++..+ .++.+.+. 
T Consensus       187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~~--~~~~-~~~dv~~~~~~~~~v~~  263 (399)
T PRK05579        187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLPT--PAGV-KRIDVESAQEMLDAVLA  263 (399)
T ss_pred             CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccccC--CCCc-EEEccCCHHHHHHHHHH
Confidence            6899999998                677999999999999999998866543211  1122 3344444 34444443 


Q ss_pred             --CCccEEEECCCCh
Q 021831          236 --GKFDAVLDTIGAP  248 (307)
Q Consensus       236 --~~~dvvid~~g~~  248 (307)
                        +.+|++|.+.+-.
T Consensus       264 ~~~~~DilI~~Aav~  278 (399)
T PRK05579        264 ALPQADIFIMAAAVA  278 (399)
T ss_pred             hcCCCCEEEEccccc
Confidence              5799999998753

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=93.36  E-value=0.79  Score=40.71  Aligned_cols=93  Identities=16%  Similarity=0.130  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCccH--HHHHHcC----CceEEeCCChhHHHHhcCCccEEEECCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAG----AEQAVDYSSKDIELAIKGKFDAVLDTIG  246 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~~--~~~~~~g----~~~v~~~~~~~~~~~~~~~~dvvid~~g  246 (307)
                      .+.+|+|+|+ |+.|.+++..+...|+ +|+.+.+...+  ..++.++    ...+...  .+..+.+ ..+|+||+|+.
T Consensus       126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~--~~~~~~~-~~aDiVInaTp  201 (284)
T PRK12549        126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG--SDLAAAL-AAADGLVHATP  201 (284)
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec--cchHhhh-CCCCEEEECCc
Confidence            5689999995 9999999999999998 67776665432  2233332    1122222  1222222 45899999964


Q ss_pred             Ch--h--hHHHHHhcccCCcEEEEeccC
Q 021831          247 AP--E--TERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       247 ~~--~--~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ..  .  ....-...++++..++.+-.-
T Consensus       202 ~Gm~~~~~~~~~~~~l~~~~~v~DivY~  229 (284)
T PRK12549        202 TGMAKHPGLPLPAELLRPGLWVADIVYF  229 (284)
T ss_pred             CCCCCCCCCCCCHHHcCCCcEEEEeeeC
Confidence            21  0  001112346676666666543

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.34  E-value=0.91  Score=40.14  Aligned_cols=96  Identities=18%  Similarity=0.297  Sum_probs=67.9

Q ss_pred             cccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCccHHHHHHcCCceEEeCCChhHHH
Q 021831          154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (307)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~-~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (307)
                      ..++........++...---.|.+++|.|-+..+|.=.+.++...++.|+.. .+..                   ++.+
T Consensus       136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~-------------------~l~~  196 (284)
T PRK14170        136 FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTK-------------------DLPQ  196 (284)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCC-------------------CHHH
Confidence            4566666666666533222369999999999999999999999999988765 2222                   2222


Q ss_pred             HhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       233 ~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .+ ..+|++|-++|.+..+.  -..+++|..+|.+|-..
T Consensus       197 ~~-~~ADIvI~AvG~~~~i~--~~~vk~GavVIDvGin~  232 (284)
T PRK14170        197 VA-KEADILVVATGLAKFVK--KDYIKPGAIVIDVGMDR  232 (284)
T ss_pred             HH-hhCCEEEEecCCcCccC--HHHcCCCCEEEEccCcc
Confidence            22 34899999999884332  46788999999999654

>PLN02366 spermidine synthase

Probab=93.30  E-value=0.75  Score=41.37  Aligned_cols=95  Identities=17%  Similarity=0.129  Sum_probs=55.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEe-CCccHHHHHHc------CC----ceEEeCCChhHHHHh-cCCcc
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATC-GSKSIDRVLAA------GA----EQAVDYSSKDIELAI-KGKFD  239 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~-~~~~~~~~~~~------g~----~~v~~~~~~~~~~~~-~~~~d  239 (307)
                      ...++||++|+  +-|.++..+++.-+. +|..+- +.+-.+.+++.      +.    -.++..+...+.+.. .+.||
T Consensus        90 ~~pkrVLiIGg--G~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yD  167 (308)
T PLN02366         90 PNPKKVLVVGG--GDGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYD  167 (308)
T ss_pred             CCCCeEEEEcC--CccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCC
Confidence            45789999995  337777788877665 666653 33323333331      11    122222222344433 24799


Q ss_pred             EEEECCCC----------hhhHHHHHhcccCCcEEEEecc
Q 021831          240 AVLDTIGA----------PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       240 vvid~~g~----------~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      +||--...          .+.+..+.++|+++|.++.-+.
T Consensus       168 vIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~~  207 (308)
T PLN02366        168 AIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQAE  207 (308)
T ss_pred             EEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECcC
Confidence            88764432          2246788899999999987543

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.29  E-value=1.1  Score=39.50  Aligned_cols=96  Identities=14%  Similarity=0.204  Sum_probs=68.1

Q ss_pred             cccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCccHHHHHHcCCceEEeCCChhHHH
Q 021831          154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (307)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~-~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (307)
                      ..++........++...---.|.+++|+|-+..+|.=.+.++...|+.|+.. .+..+                   +.+
T Consensus       135 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~-------------------l~~  195 (282)
T PRK14169        135 VVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRN-------------------LKQ  195 (282)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCC-------------------HHH
Confidence            4566666666666533222479999999999999999999999999988765 22222                   222


Q ss_pred             HhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       233 ~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .. ..+|++|-++|.+..+.  -..+++|..+|.+|--.
T Consensus       196 ~~-~~ADIvI~AvG~p~~i~--~~~vk~GavVIDvGin~  231 (282)
T PRK14169        196 LT-KEADILVVAVGVPHFIG--ADAVKPGAVVIDVGISR  231 (282)
T ss_pred             HH-hhCCEEEEccCCcCccC--HHHcCCCcEEEEeeccc
Confidence            21 34899999999884432  45789999999999643

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=93.21  E-value=0.24  Score=46.85  Aligned_cols=71  Identities=18%  Similarity=0.186  Sum_probs=45.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--HHHHHH-cC--CceEEeCCChhHHHHhcCCccEEEECCC
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDRVLA-AG--AEQAVDYSSKDIELAIKGKFDAVLDTIG  246 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--~~~~~~-~g--~~~v~~~~~~~~~~~~~~~~dvvid~~g  246 (307)
                      +++.+|||+||+|-+|..++..+...|.+|+++.+...  ...... .+  ....++.+   ..+....++|+||.+.+
T Consensus       118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~D---i~~~~~~~~D~ViHlAa  193 (436)
T PLN02166        118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHD---VVEPILLEVDQIYHLAC  193 (436)
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECc---cccccccCCCEEEECce
Confidence            45689999999999999999999989999998865321  111111 11  11222222   11111246999999885

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=93.18  E-value=0.84  Score=40.52  Aligned_cols=72  Identities=22%  Similarity=0.236  Sum_probs=42.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCccH--HHHHHc----CCceEEeCCChhHHHHhcCCccEEEECCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAA----GAEQAVDYSSKDIELAIKGKFDAVLDTIG  246 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~~--~~~~~~----g~~~v~~~~~~~~~~~~~~~~dvvid~~g  246 (307)
                      .+.+++|+|+ |+.+.+++..+...|+ +++...++.++  ..++.+    +...+...+..++.+.+ ..+|+|||++.
T Consensus       126 ~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~-~~~divINaTp  203 (283)
T PRK14027        126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVI-AAADGVVNATP  203 (283)
T ss_pred             CCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHH-hhcCEEEEcCC
Confidence            4789999996 9999998888888998 66666665432  223332    21112111111111112 45899999986


Q ss_pred             C
Q 021831          247 A  247 (307)
Q Consensus       247 ~  247 (307)
                      .
T Consensus       204 ~  204 (283)
T PRK14027        204 M  204 (283)
T ss_pred             C
Confidence            3

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=93.13  E-value=0.25  Score=43.48  Aligned_cols=58  Identities=29%  Similarity=0.413  Sum_probs=41.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCCh-hHHHHhcC-CccEEEECCCC
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK-DIELAIKG-KFDAVLDTIGA  247 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~-~~dvvid~~g~  247 (307)
                      +|||.||+|.+|..+++.+...|.+|+++.+..             .|..+. .+.+.+.+ .+|+||++.+.
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~-------------~d~~~~~~~~~~~~~~~~d~vi~~a~~   60 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQ-------------LDLTDPEALERLLRAIRPDAVVNTAAY   60 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcc-------------cCCCCHHHHHHHHHhCCCCEEEECCcc
Confidence            489999999999999999998999998887641             222222 23333333 57888888763

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	307
2vn8_A	375	Crystal Structure Of Human Reticulon 4 Interacting		4e-35
3gaz_A	343	Crystal Structure Of An Alcohol Dehydrogenase Super		3e-22
3tqh_A	321	Structure Of The Quinone Oxidoreductase From Coxiel		2e-21
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		5e-21
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		3e-20
4dup_A	353	Crystal Structure Of A Quinone Oxidoreductase From		5e-18
1qor_A	327	Crystal Structure Of Escherichia Coli Quinone Oxido		8e-13
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		5e-12
3b6z_A	371	Lovastatin Polyketide Enoyl Reductase (Lovc) Comple		7e-12
3gms_A	340	Crystal Structure Of Putative Nadph:quinone Reducta		1e-11
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		2e-11
3gqv_A	371	Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant		2e-11
3goh_A	315	Crystal Structure Of Alcohol Dehydrogenase Superfam		1e-09
2c0c_A	362	Structure Of The Mgc45594 Gene Product Length = 362		2e-09
1iyz_A	302	Crystal Structures Of The Quinone Oxidoreductase Fr		2e-09
2x7h_A	370	Crystal Structure Of The Human Mgc45594 Gene Produc		2e-09
2wek_A	341	Crystal Structure Of The Human Mgc45594 Gene Produc		2e-09
3fbg_A	346	Crystal Structure Of A Putative Arginate Lyase From		2e-09
2cf2_D	295	Architecture Of Mammalian Fatty Acid Synthase Lengt		2e-09
2j8z_A	354	Crystal Structure Of Human P53 Inducible Oxidoreduc		4e-09
4dvj_A	363	Crystal Structure Of A Putative Zinc-Dependent Alco		6e-09
2oby_A	338	Crystal Structure Of Human P53 Inducible Oxidoreduc		8e-09
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		7e-08
1zsy_A	357	The Structure Of Human Mitochondrial 2-Enoyl Thioes		1e-07
2vcy_A	344	Crystal Structure Of 2-Enoyl Thioester Reductase Of		1e-07
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		3e-07
1iz0_A	302	Crystal Structures Of The Quinone Oxidoreductase Fr		5e-07
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		6e-07
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		2e-06
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		2e-06
1n9g_A	386	Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr		9e-06
1n9g_B	386	Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr		1e-05
4a0s_A	447	Structure Of The 2-Octenoyl-Coa Carboxylase Reducta		2e-05
1h0k_A	364	Enoyl Thioester Reductase 2 Length = 364		2e-05
1gu7_A	364	Enoyl Thioester Reductase From Candida Tropicalis L		3e-05
1pqw_A	198	Putative Enoyl Reductase Domain Of Polyketide Synth		4e-05
1gyr_A	364	Mutant Form Of Enoyl Thioester Reductase From Candi		4e-05
1pl7_A	356	Human Sorbitol Dehydrogenase (Apo) Length = 356		4e-05
1pl6_A	356	Human SdhNADHINHIBITOR COMPLEX Length = 356		9e-05
3hzz_A	467	2.4 Angstrom Crystal Structure Of Streptomyces Coll		1e-04
3krt_A	456	Crystal Structure Of Putative Crotonyl Coa Reductas		1e-04
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		3e-04
3qe3_A	355	Sheep Liver Sorbitol Dehydrogenase Length = 355		3e-04
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		5e-04
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		6e-04

>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein 1 In Complex With Nadph Length = 375

Iteration: 1
 Score =  144 bits (364), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 94/275 (34%), Positives = 142/275 (51%), Gaps = 23/275 (8%)
Query: 31  AVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF----E 85
           A V+ ++G  EVL    N+ +P +  PNEV+V+  A S+NP+D  MRSGYG +      +
Sbjct: 24  AWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRD 83
Query: 86  PL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSE 137
           PL         PL LGRD+SG V   G  V+    G EV+ A+ P   +GT +++ V+S 
Sbjct: 84  PLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWK-QGTLSEFVVVSG 142
Query: 138 DELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRXXXXXXXXXXXXXXXQ 193
           +E++ KP S+TH  A+++P+ ALTAW A+     +++    G+R               Q
Sbjct: 143 NEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQ 202
Query: 194 FSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKG--KFDAVLDTIGAPETE 251
              A   HV+A C   + + V   GA+  +DY S  +E  +K    FD +LD +G   TE
Sbjct: 203 VMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGG-STE 261
Query: 252 RLGLNFLKR--GGHYMTLHGETAALADHYGLALGL 284
               +FLK+  G  Y+TL        D  G+A G+
Sbjct: 262 TWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGM 296

>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily Protein From Novosphingobium Aromaticivorans Length = 343

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 120/253 (47%), Gaps = 15/253 (5%)
Query: 24  LVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSI 83
           L T +  A V+    GP VL     +  P   P +VLV+  A   NPLD ++R+G     
Sbjct: 3   LTTPTXIAAVVEEANGPFVLR---KLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHA 59
Query: 84  FEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTA-VRGTYADYAVLSEDELTP 142
            +PL P ILG D++G V AVG  V S  VG  VFG       ++GT+A +A +    L  
Sbjct: 60  QQPL-PAILGXDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLAS 118
Query: 143 KPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHV 202
           KP ++T   AS +P   +TAW  L   A++ +GQ                Q ++A G  V
Sbjct: 119 KPAALTXRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARV 178
Query: 203 SATCGSKSIDRVLAAGA------EQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLN 256
            AT     ++ V   GA       +  DY+++    A +G FD V DT+G P  +    +
Sbjct: 179 FATARGSDLEYVRDLGATPIDASREPEDYAAE--HTAGQG-FDLVYDTLGGPVLD-ASFS 234
Query: 257 FLKRGGHYMTLHG 269
            +KR GH ++  G
Sbjct: 235 AVKRFGHVVSCLG 247

>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella Burnetii Length = 321

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 110/223 (49%), Gaps = 12/223 (5%)
Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYG--RSIFEPL 87
           +A+   +FG P+VL++  +   P+ + N+ L++  A S+NP+D + R+G G      +  
Sbjct: 8   KAIQFDQFGPPKVLKL-VDTPTPEYRKNQXLIKVHAASLNPIDYKTRNGSGFVAKKLKNN 66
Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEVFGAL----HPTAVRGTYADYAVLSEDELTPK 143
           LP  LG D SGEV  +G+ V ++ +G +V G      HP      YA+Y   S D +  K
Sbjct: 67  LPSGLGYDFSGEVIELGSDVNNVNIGDKVXGIAGFPDHPCC----YAEYVCASPDTIIQK 122
Query: 144 PVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVS 203
              ++   A+++P A LTA +AL   A + +G                 Q +   G  V 
Sbjct: 123 LEKLSFLQAASLPTAGLTALQALN-QAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVI 181
Query: 204 ATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIG 246
            T   ++   + A GAEQ ++Y  +D  LAI    DAV+D +G
Sbjct: 182 TTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVG 224

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score = 98.2 bits (243), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 116/251 (46%), Gaps = 40/251 (15%)
Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           RAVV+   GGPEVLEV  ++ VP+  P EV VR +A ++N LD  +R G    +  P LP
Sbjct: 2   RAVVMRARGGPEVLEVA-DLPVPEPGPKEVRVRLKAAALNHLDVWVRKG----VASPKLP 56
Query: 90  L--ILGRDISGEVAAVGASVRSLTVGQEVFGALHP------------------------- 122
           L  +LG D SG V AVG  V     G EV   ++P                         
Sbjct: 57  LPHVLGADGSGVVDAVGPGVEGFAPGDEVV--INPGLSCGRCERCLAGEDNLCPRYQILG 114
Query: 123 TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXX 182
               GTYA+Y VL E  L PKP +++  +A+AIP   LTAW+ +     +  G       
Sbjct: 115 EHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMA 174
Query: 183 XXXXXXXXXXQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIK----GK 237
                     Q +   G  V AT GS+  + R  A GA++ V+Y+  D    ++    GK
Sbjct: 175 AGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGK 234
Query: 238 -FDAVLDTIGA 247
             D V+D  GA
Sbjct: 235 GADKVVDHTGA 245

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 8/198 (4%)
Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           RAV +  FGGPEVL++R ++ VP  K ++VL++  A  +NP++T +RSG Y R   +PLL
Sbjct: 31  RAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR---KPLL 87
Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P   G D++G + AVG +  +   G  VF +   + + G YA+YA+ ++  +   P  + 
Sbjct: 88  PYTPGSDVAGVIEAVGDNASAFKKGDRVFTS---STISGGYAEYALAADHTVYKLPEKLD 144
Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGS 208
               +AI     TA+RAL  +A +  G+                Q + A G  +  T G+
Sbjct: 145 FKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGT 204
Query: 209 KSIDR-VLAAGAEQAVDY 225
           +   + VL  GA +  ++
Sbjct: 205 EEGQKIVLQNGAHEVFNH 222

>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From Rhizobium Etli Cfn 42 Length = 353

Iteration: 1
 Score = 88.2 bits (217), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 112/256 (43%), Gaps = 26/256 (10%)
Query: 9   SANDYLVSPLRFVRFLVTTSCRAVVLPRFGGPEVLEV--RPNVEVPDLKPNEVLVRTRAV 66
           S  D     L F    +    R V L  FGGP+V  +  RP   +P     EVLVR  A+
Sbjct: 9   SGVDLGTENLYFQSXSLPQEXRFVDLKSFGGPDVXVIGKRP---LPVAGEGEVLVRAEAI 65
Query: 67  SINPLDTRMRSGYGRSIFEPLLPL--ILGRDISGEVAAVGASVRSLTVGQEVFGALHPTA 124
            +N  D   R G     + P      ILG ++SGE+  VG  V    VG +V G     A
Sbjct: 66  GVNRPDIAQRQGS----YPPPKDASPILGLELSGEIVGVGPGVSGYAVGDKVCG----LA 117
Query: 125 VRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXX 184
             G YA+Y +L   ++ P P       A+A+P    T W  L   A ++EG+        
Sbjct: 118 NGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQXAGLTEGESVLIHGGT 177
Query: 185 XXXXXXXXQFSVASGCHVSATCGS----KSIDRVLAAGAEQAVDYSSKDIELAIKGK--- 237
                   Q + A G  V AT GS    ++ +R+   GA++ ++Y S+D    IK +   
Sbjct: 178 SGIGTTAIQLARAFGAEVYATAGSTGKCEACERL---GAKRGINYRSEDFAAVIKAETGQ 234
Query: 238 -FDAVLDTIGAPETER 252
             D +LD IGA   ER
Sbjct: 235 GVDIILDXIGAAYFER 250

>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone Oxidoreductase Complexed With Nadph Length = 327

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 116/257 (45%), Gaps = 21/257 (8%)
Query: 36  RFGGPEVLEVRPNVEVPDLKP--NEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILG 93
           + GGPEVL+    VE     P  NE+ V  +A+ IN +DT +RSG       P LP  LG
Sbjct: 9   KHGGPEVLQA---VEFTPADPAENEIQVENKAIGINFIDTYIRSGL---YPPPSLPSGLG 62
Query: 94  RDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADAS 153
            + +G V+ VG+ V+ +  G  V   ++  +  G Y+    +  D+    P +++   A+
Sbjct: 63  TEAAGIVSKVGSGVKHIKAGDRV---VYAQSALGAYSSVHNIIADKAAILPAAISFEQAA 119
Query: 154 AIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGS-KSID 212
           A     LT +  L+    +   ++               Q++ A G  +  T G+ +   
Sbjct: 120 ASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQ 179
Query: 213 RVLAAGAEQAVDYSSKDI-----ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
             L AGA Q ++Y  +D+     E+    K   V D++G    ER  L+ L+R G  ++ 
Sbjct: 180 SALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWER-SLDCLQRRGLMVSF 238
Query: 268 HGETAALADHYGLALGL 284
              + A+    G+ LG+
Sbjct: 239 GNSSGAVT---GVNLGI 252

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 95/216 (43%), Gaps = 15/216 (6%)
Query: 38  GGPEVLE-VRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDI 96
           GGPEVLE V    E P   P  V+VR +A+ +N +DT  RSG   +   P LP  LG + 
Sbjct: 11  GGPEVLEYVDFEPEAPG--PQAVVVRNKAIGLNFIDTYYRSGLYPA---PFLPSGLGAEG 65
Query: 97  SGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIP 156
           +G V AVG  V    VG  V    + T   G Y++  VL E  L     SV+   A+A+ 
Sbjct: 66  AGVVEAVGDEVTRFKVGDRV---AYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALM 122
Query: 157 FAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGS-KSIDRVL 215
              LT    L+   ++  G+                Q++ A G  +  T  S +      
Sbjct: 123 LKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK 182
Query: 216 AAGAEQAVDYSSKDI-----ELAIKGKFDAVLDTIG 246
           A GA + +DYS +D+     EL    K   V D +G
Sbjct: 183 ALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVG 218

>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa Length = 371

Iteration: 1
 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 95/238 (39%), Gaps = 27/238 (11%)
Query: 52  PDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLT 111
           P L  ++V VR  AV+INP DT+MR  +            LG D +G V AVG+ V  + 
Sbjct: 32  PMLPRDQVYVRVEAVAINPSDTKMRGQFATPW------AFLGTDYAGTVVAVGSDVTHIQ 85
Query: 112 VGQEVFGALHP----TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK 167
           VG  V+GA +     T  +G ++ Y V         P  ++   A+A+P    TA  A+K
Sbjct: 86  VGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMK 145
Query: 168 C------------AARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVL 215
                            S+                  Q    SG    ATC   + D   
Sbjct: 146 LLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAK 205
Query: 216 AAGAEQAVDYSSKDIELAI----KGKFDAVLDTIGAPETERLGLNFLKR-GGHYMTLH 268
           + GAE+  DY + ++   I    K      LD I   E+       + R GGHY++L+
Sbjct: 206 SRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLN 263

>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From Bacillus Thuringiensis Length = 340

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 105/247 (42%), Gaps = 19/247 (7%)
Query: 30  RAVVLPRFGGP-EVLEVR-PNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEP 86
           + +   +FG P +VL+V   N+E   LK NEV VR     INP D    +G Y   I  P
Sbjct: 6   KLIQFHKFGNPKDVLQVEYKNIE--PLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLP 63
Query: 87  LLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVS 146
            +P   G +  G V  VGA V    +G+ V     P    GT+ +Y   S D + P P S
Sbjct: 64  NIP---GYEGVGIVENVGAFVSRELIGKRVL----PLRGEGTWQEYVKTSADFVVPIPDS 116
Query: 147 VTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFS-VASGCHVSAT 205
           +    A+ +    LTAW        +                    Q S + +   ++ T
Sbjct: 117 IDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVT 176
Query: 206 CGSKSIDRVLAAGAEQAVDYSSKDI-----ELAIKGKFDAVLDTIGAPETERLGLNFLKR 260
             +K  + +L  GA   +D S+  +     EL      DA +D+IG P+   L  + L+ 
Sbjct: 177 RNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFS-LRP 235
Query: 261 GGHYMTL 267
            GH++T+
Sbjct: 236 NGHFLTI 242

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 84/205 (40%), Gaps = 34/205 (16%)
Query: 51  VPDLKPNEVLVRTRAVSINPLDTR-MRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS 109
           VP+   ++++VRT AVS+N  D   + +G G  +  P +P     D SG V AVG SV  
Sbjct: 48  VPEAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAFPFVP---ASDXSGVVEAVGKSVTR 104
Query: 110 LTVGQ------------------------EVFGALHPTAVRGTYADYAVLSEDELTPKPV 145
              G                         E  G  HP    G  ++Y VL E      P 
Sbjct: 105 FRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHP----GVLSEYVVLPEGWFVAAPK 160
Query: 146 SVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSAT 205
           S+  A+AS +P A LTAW AL     +  G R               Q + A+G  V  T
Sbjct: 161 SLDAAEASTLPCAGLTAWFALVEKGHLRAGDR-VVVQGTGGVALFGLQIAKATGAEVIVT 219
Query: 206 CGSKS-IDRVLAAGAEQAVDYSSKD 229
             S+  +DR  A GA+  ++   +D
Sbjct: 220 SSSREKLDRAFALGADHGINRLEED 244

>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s With Bound Nadp Length = 371

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 94/238 (39%), Gaps = 27/238 (11%)
Query: 52  PDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLT 111
           P L  ++V VR  AV+INP DT MR  +            LG D +G V AVG+ V  + 
Sbjct: 32  PMLPRDQVYVRVEAVAINPSDTSMRGQFATPW------AFLGTDYAGTVVAVGSDVTHIQ 85
Query: 112 VGQEVFGALHP----TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK 167
           VG  V+GA +     T  +G ++ Y V         P  ++   A+A+P    TA  A+K
Sbjct: 86  VGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMK 145
Query: 168 C------------AARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVL 215
                            S+                  Q    SG    ATC   + D   
Sbjct: 146 LLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAK 205
Query: 216 AAGAEQAVDYSSKDIELAI----KGKFDAVLDTIGAPETERLGLNFLKR-GGHYMTLH 268
           + GAE+  DY + ++   I    K      LD I   E+       + R GGHY++L+
Sbjct: 206 SRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLN 263

>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily Protein (np_718042.1) From Shewanella Oneidensis At 1.55 A Resolution Length = 315

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 69/121 (57%), Gaps = 6/121 (4%)
Query: 48  NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107
           +V++P L  +++LV+ +A+ INP+D +       +     +P   G D +G +  VGA V
Sbjct: 21  SVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVP---GVDGAGVIVKVGAKV 77
Query: 108 RSLTVGQEVFGALHPTAVR-GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL 166
            S  +G+ V  A H +  R G++A++ VL+ D +   P +++   A+A+P   LTAW+A 
Sbjct: 78  DSKXLGRRV--AYHTSLKRHGSFAEFTVLNTDRVXTLPDNLSFERAAALPCPLLTAWQAF 135
Query: 167 K 167
           +
Sbjct: 136 E 136

>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 15/213 (7%)
Query: 41  EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEV 100
           E + +  +  VP     ++LVR R V +N  D    +G      +P  P  +G +  GEV
Sbjct: 38  EAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP--PFDIGFEGIGEV 95
Query: 101 AAVGASVRS-LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAA 159
            A+G S  +  TVGQ V   + P    G++A+Y V+     TP P      +   +  + 
Sbjct: 96  VALGLSASARYTVGQAV-AYMAP----GSFAEYTVVPASIATPVPS--VKPEYLTLLVSG 148
Query: 160 LTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVLAA-G 218
            TA+ +LK    +SEG++               Q S  + CHV  TC S      L + G
Sbjct: 149 TTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLG 208
Query: 219 AEQAVDYSSKDIELAIKGKF----DAVLDTIGA 247
            ++ ++Y ++ +   +K ++    D V +++G 
Sbjct: 209 CDRPINYKTEPVGTVLKQEYPEGVDVVYESVGG 241

>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From Thermus Thermophilus Hb8 And Its Complex With Nadph Length = 302

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 105/250 (42%), Gaps = 27/250 (10%)
Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
            +A VL R GGP  L   P    P+ +  EV++R  AV +N  D  MR G   +   P  
Sbjct: 1   MKAWVLKRLGGPLELVDLPE---PEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHP-- 55
Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P I G ++ G             V    + AL P   +G  A+   + +  L P P  ++
Sbjct: 56  PFIPGMEVVG------------VVEGRRYAALVP---QGGLAERVAVPKGALLPLPEGLS 100
Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHV-SATCG 207
             +A+A P + LTA+ ALK  A+   G++               Q + A G  V +A   
Sbjct: 101 PEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR 159
Query: 208 SKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
            + +   LA GAE+A  Y+         G  D VL+  G    E LGL  L  GG  + +
Sbjct: 160 PEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGKEVEESLGL--LAHGGRLVYI 217
Query: 268 ---HGETAAL 274
               GE A +
Sbjct: 218 GAAEGEVAPI 227

>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 15/213 (7%)
Query: 41  EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEV 100
           E + +  +  VP     ++LVR R V +N  D    +G      +P  P  +G +  GEV
Sbjct: 46  EAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP--PFDIGFEGIGEV 103
Query: 101 AAVGASVRS-LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAA 159
            A+G S  +  TVGQ V   + P    G++A+Y V+     TP P      +   +  + 
Sbjct: 104 VALGLSASARYTVGQAV-AYMAP----GSFAEYTVVPASIATPVPS--VKPEYLTLLVSG 156
Query: 160 LTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVLAA-G 218
            TA+ +LK    +SEG++               Q S  + CHV  TC S      L + G
Sbjct: 157 TTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLG 216
Query: 219 AEQAVDYSSKDIELAIKGKF----DAVLDTIGA 247
            ++ ++Y ++ +   +K ++    D V +++G 
Sbjct: 217 CDRPINYKTEPVGTVLKQEYPEGVDVVYESVGG 249

>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 15/213 (7%)
Query: 41  EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEV 100
           E + +  +  VP     ++LVR R V +N  D    +G      +P  P  +G +  GEV
Sbjct: 17  EAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP--PFDIGFEGIGEV 74
Query: 101 AAVGASVRS-LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAA 159
            A+G S  +  TVGQ V   + P    G++A+Y V+     TP P      +   +  + 
Sbjct: 75  VALGLSASARYTVGQAV-AYMAP----GSFAEYTVVPASIATPVPS--VKPEYLTLLVSG 127
Query: 160 LTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVLAA-G 218
            TA+ +LK    +SEG++               Q S  + CHV  TC S      L + G
Sbjct: 128 TTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLG 187
Query: 219 AEQAVDYSSKDIELAIKGKF----DAVLDTIGA 247
            ++ ++Y ++ +   +K ++    D V +++G 
Sbjct: 188 CDRPINYKTEPVGTVLKQEYPEGVDVVYESVGG 220

>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From Staphylococcus Haemolyticus Length = 346

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 66/120 (55%), Gaps = 8/120 (6%)
Query: 48  NVEVPDLKPNEVLVRTRAVSINPLDTRMR-SGYGRSIFEPLLPLILGRDISGEVAAVGAS 106
           N+++P+ K +E+LV+ +++S+NP+DT+ R     ++      P +LG D  G V +VG  
Sbjct: 24  NLDIPEPKVHEILVKIQSISVNPVDTKQRLMDVSKA------PRVLGFDAIGVVESVGNE 77
Query: 107 VRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL 166
           V     G  V+ +  P    G+ A+Y +++E  +   P +++   A ++P   +TA+  L
Sbjct: 78  VTMFNQGDIVYYSGSPDQ-NGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETL 136

>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase Length = 295

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 100/238 (42%), Gaps = 24/238 (10%)
Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
            +A VL R GGP  L   P    P+ +  EV++R  AV +N  D  MR G   +   P  
Sbjct: 1   MKAWVLKRLGGPLELVDLPE---PEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHP-- 55
Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P I G ++ G             V    + AL P   +G  A+   + +  L P P  ++
Sbjct: 56  PFIPGMEVVG------------VVEGRRYAALVP---QGGLAERVAVPKGALLPLPEGLS 100
Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHV-SATCG 207
             +A+A P + LTA+ ALK  A+   G++               Q + A G  V +A   
Sbjct: 101 PEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR 159
Query: 208 SKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
            + +   LA GAE+A  Y+         G  D VL+  G    E LGL  L  GG  +
Sbjct: 160 PEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGKEVEESLGL--LAHGGRLV 215

>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase ( Tp53i3,Pig3) Length = 354

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 93/235 (39%), Gaps = 12/235 (5%)
Query: 24  LVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSI 83
           L   S  AV   + GGPE L V+  V  P     EVL++  A ++N  D   R G  +  
Sbjct: 18  LYFQSMLAVHFDKPGGPENLYVK-EVAKPSPGEGEVLLKVAASALNRADLMQRQG--QYD 74
Query: 84  FEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPK 143
             P    ILG + SG VA +G   +      +   AL P    G  A Y  + E  L P 
Sbjct: 75  PPPGASNILGLEASGHVAELGPGCQGHWKIGDTAMALLPG---GGQAQYVTVPEGLLMPI 131
Query: 144 PVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVS 203
           P  +T   A+AIP A LTA++ L     +  G                 Q +  +G    
Sbjct: 132 PEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPL 191
Query: 204 ATCGS-KSIDRVLAAGAEQAVDYSSKDIELA----IKGK-FDAVLDTIGAPETER 252
            T GS K +      GA    +Y  +D   A     KG   + +LD IG    E+
Sbjct: 192 VTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEK 246

>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol Dehydrogenase Protein From Rhizobium Etli Cfn 42 Length = 363

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 8/122 (6%)
Query: 48  NVEVPDLKP--NEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA 105
           ++E+P   P  +++LV  +AVS+NP+D ++R        +     ++G D +G V+AVG 
Sbjct: 42  DIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWK---VIGYDAAGIVSAVGP 98
Query: 106 SVRSLTVGQEVFGALHPTAVR-GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164
            V     G EVF A   + +R GT A++ ++ E  +  KP ++  A+A+A+P  ++TAW 
Sbjct: 99  DVTLFRPGDEVFYA--GSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWE 156
Query: 165 AL 166
           A 
Sbjct: 157 AF 158

>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (Tp53i3,Pig3) Length = 338

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 91/228 (39%), Gaps = 12/228 (5%)
Query: 31  AVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPL 90
           AV   + GGPE L V+  V  P     EVL++  A ++N  D   R G  +    P    
Sbjct: 9   AVHFDKPGGPENLYVK-EVAKPSPGEGEVLLKVAASALNRADLMQRQG--QYDPPPGASN 65
Query: 91  ILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHA 150
           ILG + SG VA +G   +      +   AL P    G  A Y  + E  L P P  +T  
Sbjct: 66  ILGLEASGHVAELGPGCQGHWKIGDTAMALLPG---GGQAQYVTVPEGLLMPIPEGLTLT 122
Query: 151 DASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGS-K 209
            A+AIP A LTA++ L     +  G                 Q +  +G     T GS K
Sbjct: 123 QAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQK 182
Query: 210 SIDRVLAAGAEQAVDYSSKDIELA----IKGK-FDAVLDTIGAPETER 252
            +      GA    +Y  +D   A     KG   + +LD IG    E+
Sbjct: 183 KLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEK 230

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 14/250 (5%)
Query: 26  TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFE 85
           +   RAVVL  FGG   L +     +P+ +  E+ +R +A  +N +D  +R G   +   
Sbjct: 1   SMEMRAVVLAGFGGLNKLRLFRKA-MPEPQDGELKIRVKACGLNFIDLMVRQGNIDN--P 57
Query: 86  PLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPV 145
           P  PL+ G + SG V A+G SV+   +G  V   ++  A    +A+      + +   P 
Sbjct: 58  PKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYNA----WAEVVCTPVEFVYKIPD 113
Query: 146 SVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQF-SVASGCHVSA 204
            ++ ++A+A P   +TA+  L   A + EG                 Q  S      V  
Sbjct: 114 DMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFG 173
Query: 205 TCGS---KSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRG 261
           T  +   ++I   +    ++  DY  +   ++ +G  D VLD +    T + GL+ LK  
Sbjct: 174 TASTFKHEAIKDSVTHLFDRNADYVQEVKRISAEG-VDIVLDCLCGDNTGK-GLSLLKPL 231
Query: 262 GHYMTLHGET 271
           G Y+ L+G +
Sbjct: 232 GTYI-LYGSS 240

>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester Reductase (Cgi- 63) Length = 357

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 107/256 (41%), Gaps = 28/256 (10%)
Query: 30  RAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPL 87
           RA+V    G P +V+E++ N+E+  ++ ++V V+  A  INP D  M  G YG     P 
Sbjct: 28  RALVYGHHGDPAKVVELK-NLELAAVRGSDVRVKMLAAPINPSDINMIQGNYG---LLPE 83
Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSV 147
           LP + G +   +V AVG++V  L  G  V  A    A  GT+   AV SE+ L   P  +
Sbjct: 84  LPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPA---NAGLGTWRTEAVFSEEALIQVPSDI 140
Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCG 207
               A+ +     TA+R L    ++  G                 Q + A G        
Sbjct: 141 PLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVR 200
Query: 208 -----SKSIDRVLAAGAEQAVDYSSKDIEL---AIKGKFDAV------LDTIGAPETERL 253
                 K  DR+ + GAE  +     + EL    +K  F  +      L+ +G   +  L
Sbjct: 201 DRPDIQKLSDRLKSLGAEHVI----TEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTEL 256
Query: 254 GLNFLKRGGHYMTLHG 269
            L  L RGG  +T  G
Sbjct: 257 -LRQLARGGTMVTYGG 271

>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human Fas Ii Length = 344

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 107/256 (41%), Gaps = 28/256 (10%)
Query: 30  RAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPL 87
           RA+V    G P +V+E++ N+E+  ++ ++V V+  A  INP D  M  G YG     P 
Sbjct: 15  RALVYGHHGDPAKVVELK-NLELAAVRGSDVRVKMLAAPINPSDINMIQGNYG---LLPE 70
Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSV 147
           LP + G +   +V AVG++V  L  G  V  A    A  GT+   AV SE+ L   P  +
Sbjct: 71  LPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPA---NAGLGTWRTEAVFSEEALIQVPSDI 127
Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCG 207
               A+ +     TA+R L    ++  G                 Q + A G        
Sbjct: 128 PLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVR 187
Query: 208 -----SKSIDRVLAAGAEQAVDYSSKDIEL---AIKGKFDAV------LDTIGAPETERL 253
                 K  DR+ + GAE  +     + EL    +K  F  +      L+ +G   +  L
Sbjct: 188 DRPDIQKLSDRLKSLGAEHVI----TEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTEL 243
Query: 254 GLNFLKRGGHYMTLHG 269
            L  L RGG  +T  G
Sbjct: 244 -LRQLARGGTMVTYGG 258

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 106/254 (41%), Gaps = 14/254 (5%)
Query: 31  AVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPL 90
           A V+ + GGP+   V   V+V    P +V +R  A+ +N LDT  R+G    +     P+
Sbjct: 4   AAVIHKKGGPDNF-VWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPI 62
Query: 91  ILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDEL--TPKPVSVT 148
           ++G + +  V  VG  V   TVG+ V   L P    G Y+   +   ++L   PK + + 
Sbjct: 63  VVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPL---GAYSQERLYPAEKLIKVPKDLDLD 119
Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGS 208
               + +    +TA   L    ++  G                  ++   G  V  T  +
Sbjct: 120 DVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVST 179
Query: 209 KS-IDRVLAAGAEQAVDYSSKDIELAIK----GK-FDAVLDTIGAPETERLGLNFLKRGG 262
           +   +     G    ++YS++D    ++    GK  D V D+IG  +T +  L+ L+  G
Sbjct: 180 EEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGK-DTLQKSLDCLRPRG 238
Query: 263 HYMTLHGETAALAD 276
                +G  + +AD
Sbjct: 239 -MCAAYGHASGVAD 251

>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From Thermus Thermophilus Hb8 And Its Complex With Nadph Length = 302

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 101/250 (40%), Gaps = 29/250 (11%)
Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           +A VL R GGP  L   P    P+ +  EV++R  AV +N  D   R G Y   +  P +
Sbjct: 2   KAWVLKRLGGPLELVDLPE---PEAEEGEVVLRVEAVGLNFADHLXRLGAYLTRLHPPFI 58
Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P                      V    + AL P   +G  A+   + +  L P P  ++
Sbjct: 59  P---------------GXEVVGVVEGRRYAALVP---QGGLAERVAVPKGALLPLPEGLS 100
Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHV-SATCG 207
             +A+A P + LTA+ ALK  A+   G++               Q + A G  V +A   
Sbjct: 101 PEEAAAFPVSFLTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAXGLRVLAAASR 159
Query: 208 SKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
            + +   LA GAE+A  Y+         G  D VL+  G    E LGL  L  GG  + +
Sbjct: 160 PEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGKEVEESLGL--LAHGGRLVYI 217
Query: 268 ---HGETAAL 274
               GE A +
Sbjct: 218 GAAEGEVAPI 227

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 103/249 (41%), Gaps = 23/249 (9%)
Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           + +++   GG +V++   +  VP +   E+L++ +   +N +++  R G    I+    P
Sbjct: 10  KVILIDEIGGYDVIKYE-DYPVPSISEEELLIKNKYTGVNYIESYFRKG----IYPCEKP 64
Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTH 149
            +LGR+ SG V A G  V +  VG +V           T+A Y+ +S      K    T 
Sbjct: 65  YVLGREASGTVVAKGKGVTNFEVGDQV-----AYISNSTFAQYSKISSQGPVMKLPKGT- 118
Query: 150 ADASAIPFAA-----LTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSA 204
           +D     +AA     LTA      A  + +G                 Q     G H  A
Sbjct: 119 SDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIA 178
Query: 205 TCGSKSIDRVLAA-GAEQAVDYSSKDIELAI----KGK-FDAVLDTIGAPETERLGLNFL 258
              +    ++    GAE  ++ S +DI   +     GK  DA  D++G  +T  + L  L
Sbjct: 179 VASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGK-DTFEISLAAL 237
Query: 259 KRGGHYMTL 267
           KR G +++ 
Sbjct: 238 KRKGVFVSF 246

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 37/262 (14%)
Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A V+ +F  P  L+++  VE P +   EVLVR +A  +    T + + +G    +P LP
Sbjct: 2   KAAVVEQFKEP--LKIK-EVEKPTISYGEVLVRIKACGV--CHTDLHAAHGDWPVKPKLP 56
Query: 90  LILGRDISGEVAAVGASVRSLTVG---------------------QEVFGALHPTA---V 125
           LI G +  G V  VG  V  L VG                     QE        A   V
Sbjct: 57  LIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSV 116
Query: 126 RGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXX 185
            G YA+Y   + D +   P +++  +A+ I  A +T ++ALK     ++           
Sbjct: 117 DGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTG--AKPGEWVAIYGIG 174
Query: 186 XXXXXXXQFSVASGCHVSAT-CGSKSIDRVLAAGAEQAVDYSSKD----IELAIKGKFDA 240
                  Q++ A G +V A   G + ++     GA+  V+   +D    ++  + G   A
Sbjct: 175 GLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAA 234
Query: 241 VLDTIGAPETERLGLNFLKRGG 262
           V+  +  P  +    N ++RGG
Sbjct: 235 VVTAVSKPAFQS-AYNSIRRGG 255

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 29/162 (17%)
Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A V+ +F  P  L+++  VE P +   EVLVR +A  +    T + + +G    +P LP
Sbjct: 2   KAAVVEQFKEP--LKIK-EVEKPTISYGEVLVRIKACGV--CHTDLHAAHGDWPVKPKLP 56
Query: 90  LILGRDISGEVAAVGASVRSLTVG---------------------QEVFGALHPTA---V 125
           LI G +  G V  VG  V  L VG                     QE        A   V
Sbjct: 57  LIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSV 116
Query: 126 RGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK 167
            G YA+Y   + D +   P +++  +A+ I  A +T ++ALK
Sbjct: 117 DGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALK 158

>pdb|1N9G|A Chain A, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p Heterodimer From Candida Tropicalis Length = 386

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 29/178 (16%)
Query: 22  RFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPD--LKPNEVLVRTRAVSINPLDTRMRSGY 79
           +F    + +AV+  + G P+ +    + E+ D  L PNEV+V+T    INP D     G 
Sbjct: 19  QFRTMITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGV 78
Query: 80  ---------GRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-GTY 129
                    G    EP  P   G +   EV  VG++V SL  G  V     P+ V  GT+
Sbjct: 79  YPSKPAKTTGFGTAEPAAP--CGNEGLFEVIKVGSNVSSLEAGDWVI----PSHVNFGTW 132
Query: 130 ADYAVLSEDEL-----------TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQ 176
             +A+ ++D+              KP  +T    + I    LTA+  L    +++ G+
Sbjct: 133 RTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGK 190

>pdb|1N9G|B Chain B, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p Heterodimer From Candida Tropicalis Length = 386

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 29/178 (16%)
Query: 22  RFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPD--LKPNEVLVRTRAVSINPLDTRMRSGY 79
           +F    + +AV+  + G P+ +    + E+ D  L PNEV+V+T    +NP D     G 
Sbjct: 19  QFRTMITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGV 78
Query: 80  ---------GRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-GTY 129
                    G    EP  P   G +   EV  VG++V SL  G  V     P+ V  GT+
Sbjct: 79  YPSKPAKTTGFGTTEPAAP--CGNEGLFEVIKVGSNVSSLEAGDWVI----PSHVNFGTW 132
Query: 130 ADYAVLSEDEL-----------TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQ 176
             +A+ ++D+              KP  +T    + I    LTA+  L    +++ G+
Sbjct: 133 RTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGK 190

>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf In Complex With Nadp And 2-Octenoyl-Coa Length = 447

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 67/172 (38%), Gaps = 48/172 (27%)
Query: 48  NVEVPDLKPNEVLVRTRAVSIN----------PLDT-------RMRSGYGRSIFEPLLPL 90
            V +P+L P+EVLV   A SIN          P+ T         + G+     +P    
Sbjct: 54  EVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRHDQPYH-- 111
Query: 91  ILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR------------------------ 126
           +LG D SG V   G  VR    G  V   +HP  V                         
Sbjct: 112 VLGSDCSGVVVRTGIGVRRWKPGDHVI--VHPAHVDEQEPATHGDGMLGTEQRAWGFETN 169
Query: 127 -GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKC--AARMSEG 175
            G  A+Y V+   +L PKP  +T  +A+  P  A TA+R L     A+M +G
Sbjct: 170 FGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQG 221

>pdb|1H0K|A Chain A, Enoyl Thioester Reductase 2 Length = 364

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 28  SCRAVVLPRFGGPEVLEVRPNVEVPD--LKPNEVLVRTRAVSINPLDTRMRSGY------ 79
           + +AV+  + G P+ +    + E+ D  L PNEV+V+T    INP D     G       
Sbjct: 3   TAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPA 62
Query: 80  ---GRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-GTYADYAVL 135
              G    EP  P   G +   EV  VG++V SL  G  V     P+ V  GT+  +A+ 
Sbjct: 63  KTTGFGTAEPAAP--CGNEGLFEVIKVGSNVSSLEAGDWVI----PSHVNFGTWRTHALG 116
Query: 136 SEDEL-----------TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQ 176
           ++D+              KP  +T    + I    LTA+  L    +++ G+
Sbjct: 117 NDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGK 168

>pdb|1GU7|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis Length = 364

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 28  SCRAVVLPRFGGPEVLEVRPNVEVPD--LKPNEVLVRTRAVSINPLDTRMRSGY------ 79
           + +AV+  + G P+ +    + E+ D  L PNEV+V+T    +NP D     G       
Sbjct: 3   TAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPA 62
Query: 80  ---GRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-GTYADYAVL 135
              G    EP  P   G +   EV  VG++V SL  G  V     P+ V  GT+  +A+ 
Sbjct: 63  KTTGFGTTEPAAP--CGNEGLFEVIKVGSNVSSLEAGDWVI----PSHVNFGTWRTHALG 116
Query: 136 SEDEL-----------TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQ 176
           ++D+              KP  +T    + I    LTA+  L    +++ G+
Sbjct: 117 NDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGK 168

>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase Length = 198

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 8/145 (5%)
Query: 138 DELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVA 197
           D + P P ++   +A+    A LTAW +L    R+S G+R                 +  
Sbjct: 2   DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKM 61
Query: 198 SGCHVSATCGSKSIDRVLA------AGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE 251
            G  +  T GS +   +L+       G  ++VD++ + +EL      D VL+++     +
Sbjct: 62  IGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQ 121
Query: 252 RLGLNFLKRGGHYMTLHGETAALAD 276
           R G+  L  GG ++ L G+    AD
Sbjct: 122 R-GVQILAPGGRFIEL-GKKDVYAD 144

>pdb|1GYR|A Chain A, Mutant Form Of Enoyl Thioester Reductase From Candida Tropicalis Length = 364

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 28  SCRAVVLPRFGGPEVLEVRPNVEVPD--LKPNEVLVRTRAVSINPLDTRMRSGY------ 79
           + +AV+  + G P+ +    + E+ D  L PNEV+V+T    +NP D     G       
Sbjct: 3   TAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVNPSKPA 62
Query: 80  ---GRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-GTYADYAVL 135
              G    EP  P   G +   EV  VG++V SL  G  V     P+ V  GT+  +A+ 
Sbjct: 63  KTTGFGTTEPAAP--CGNEGLFEVIKVGSNVSSLEAGDWVI----PSHVNFGTWRTHALG 116
Query: 136 SEDEL-----------TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQ 176
           ++D+              KP  +T    + I    LTA+  L    +++ G+
Sbjct: 117 NDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGK 168

>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 48  NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGR-SIFEPLLPLILGRDISGEVAAVGAS 106
           N  +P+  PNEVL+R  +V I   D      YGR   F    P++LG + SG V  VG+S
Sbjct: 23  NYPIPEPGPNEVLLRMHSVGICGSDVHYWE-YGRIGNFIVKKPMVLGHEASGTVEKVGSS 81
Query: 107 VRSLTVGQEVFGALHPTAVR 126
           V+ L  G  V  A+ P A R
Sbjct: 82  VKHLKPGDRV--AIEPGAPR 99

>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 48  NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGR-SIFEPLLPLILGRDISGEVAAVGAS 106
           N  +P+  PNEVL+R  +V I   D      YGR   F    P +LG + SG V  VG+S
Sbjct: 23  NYPIPEPGPNEVLLRXHSVGICGSDVHYWE-YGRIGNFIVKKPXVLGHEASGTVEKVGSS 81
Query: 107 VRSLTVGQEVFGALHPTAVR 126
           V+ L  G  V  A+ P A R
Sbjct: 82  VKHLKPGDRV--AIEPGAPR 99

>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus Crotonyl Coa CarboxylaseREDUCTASE Length = 467

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 99/270 (36%), Gaps = 69/270 (25%)
Query: 20  FVRFLVTTSCRAVVLPR-----FGGPEVLEVRP-------NVEVPDLKPNEVLVRTRAVS 67
           F    +  S RA+ + +     F G E  +  P        V VP+L P E LV   A S
Sbjct: 40  FAALQLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDEVPVPELGPGEALVAVMASS 99
Query: 68  INPLDTRMRSGYGRSIFEP------------LLPL---------ILGRDISGEVAAVGAS 106
           +N       +    SIFEP            L PL         I+G D++G V   G  
Sbjct: 100 VN------YNSVWTSIFEPVSTFAFLERYGKLSPLTKRHDLPYHIIGSDLAGVVLRTGPG 153
Query: 107 VRSLTVGQEVFGALHPTAVR-------------------------GTYADYAVLSEDELT 141
           V +   G EV    H  +V                          G  A+ A++  ++L 
Sbjct: 154 VNAWQPGDEVVA--HCLSVELESPDGHDDTMLDPEQRIWGFETNFGGLAEIALVKTNQLM 211
Query: 142 PKPVSVTHADASAIPFAALTAWRAL--KCAARMSEGQRXXXXXXXXXXXXXXXQFSVASG 199
           PKP  +T  +A+A      TA+R L  +  A M +G                 QF++A G
Sbjct: 212 PKPKHLTWEEAAAPGLVNSTAYRQLVSRNGAAMKQGDNVLIWGASGGLGSYATQFALAGG 271
Query: 200 CH-VSATCGSKSIDRVLAAGAEQAVDYSSK 228
            + +      +  +   + GAE  +D +++
Sbjct: 272 ANPICVVSSPQKAEICRSMGAEAIIDRNAE 301

>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From Streptomyces Coelicolor A3(2) Length = 456

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 87/230 (37%), Gaps = 57/230 (24%)
Query: 48  NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPL-------------------- 87
           +V VP+L P E LV   A S+N       +    SIFEPL                    
Sbjct: 62  DVPVPELGPGEALVAVMASSVN------YNSVHTSIFEPLSTFGFLERYGRVSDLAKRHD 115
Query: 88  LPL-ILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-------------------- 126
           LP  ++G D++G V   G  V +   G EV    H  +V                     
Sbjct: 116 LPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVA--HCLSVELESSDGHNDTMLDPEQRIWG 173
Query: 127 -----GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL--KCAARMSEGQRXX 179
                G  A+ A++  ++L PKP  ++  +A+A      TA+R L  +  A M +G    
Sbjct: 174 FETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVL 233
Query: 180 XXXXXXXXXXXXXQFSVASGCH-VSATCGSKSIDRVLAAGAEQAVDYSSK 228
                        QF++A G + +      +  +   A GAE  +D +++
Sbjct: 234 IWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAE 283

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 29/164 (17%)
Query: 28  SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPL 87
           + +A V+  +G P  +E    V+VP   P +VLV+  A  +    T + +  G    +P 
Sbjct: 6   TMKAAVVHAYGAPLRIE---EVKVPLPGPGQVLVKIEASGV--CHTDLHAAEGDWPVKPP 60
Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTA----------------------- 124
           LP I G +  G VAAVG+ V  +  G  V      TA                       
Sbjct: 61  LPFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGY 120
Query: 125 -VRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK 167
            V G YA+Y +   + +   P +V  A+ + I  A +T ++ LK
Sbjct: 121 SVNGGYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVYKGLK 164

>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 48  NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGR-SIFEPLLPLILGRDISGEVAAVGAS 106
           N  +P+  PNEVL++  +V I   D      +GR   F    P++LG + SG V  VG+ 
Sbjct: 22  NYPIPEPGPNEVLLKMHSVGICGSDVHYWQ-HGRIGDFVVKKPMVLGHEASGTVVKVGSL 80
Query: 107 VRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTP 142
           VR L  G  V  A+ P A R T  ++  +    L+P
Sbjct: 81  VRHLQPGDRV--AIQPGAPRQT-DEFCKIGRYNLSP 113

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 39  GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMR--SGYGRSIFEPLLPLILGRDI 96
           G E++EV    +VP   P EVL++  A SI   D  +   + + +S  +P  P I+G ++
Sbjct: 16  GAELVEV----DVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKP--PQIMGHEV 69
Query: 97  SGEVAAVGASVRSLTVGQEV 116
           +GEV  VG  V  L VG  +
Sbjct: 70  AGEVVEVGPGVEDLQVGDYI 89

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 115/275 (41%), Gaps = 43/275 (15%)
Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGR-SIFEPL 87
           RA+ L   G P  LE   ++ +P  K ++VL++  A  +   D  MR G +G   I E L
Sbjct: 2   RAMRLVEIGKPLKLE---DIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDL 58
Query: 88  ---LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHP---------------------- 122
              LP+ LG +I+G +  VG  V   + G  V  A++P                      
Sbjct: 59  GVKLPVTLGHEIAGRIEEVGDEVVGYSKGDLV--AVNPWEGEGNCYYCRIGEEHLCDSPR 116
Query: 123 ---TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXX 179
                  G YA+Y ++   +   K   ++  +A+ +  + +T +RA++ A+ +   +   
Sbjct: 117 WLGINYDGAYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKAS-LDPSKTLV 175
Query: 180 XXXXXXXXXXXXXQF--SVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD----IELA 233
                        Q   +V+    +      ++++    AGA+  ++ SS+D    I   
Sbjct: 176 VIGAGGGLGTMAIQIAKAVSGATIIGVDVREEALEAAKRAGADYVINASSQDPVSEIRRI 235
Query: 234 IKGK-FDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
            +GK  DAV+D   + +T  +    L + G Y+ +
Sbjct: 236 TQGKGADAVIDLNNSEKTLSIYPYVLAKQGKYVMV 270

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	307
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	1e-86
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	4e-86
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	6e-70
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	3e-65
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	1e-64
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	1e-60
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	1e-60
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	2e-59
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	1e-57
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	2e-56
3gms_A	340	Putative NADPH:quinone reductase; structural genom	4e-56
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	7e-54
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	8e-54
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	2e-52
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	3e-51
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	3e-49
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	5e-49
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	6e-49
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	7e-48
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	8e-48
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	1e-47
4eye_A	342	Probable oxidoreductase; structural genomics, niai	3e-47
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	1e-46
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	4e-45
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	1e-43
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	2e-41
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	3e-40
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	7e-38
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	1e-30
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	4e-30
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	2e-29
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	2e-26
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	1e-25
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	9e-25
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	5e-24
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	2e-22
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	8e-21
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	1e-20
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	7e-19
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	8e-19
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	8e-19
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	1e-18
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	9e-18
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	5e-17
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	3e-15
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	1e-14
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	4e-14
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	6e-14
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	6e-14
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	3e-13
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	7e-13
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	1e-12
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	1e-12
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	2e-12
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	9e-12
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	1e-11
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	6e-11
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	3e-10
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	6e-10
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	1e-09
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	4e-09
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	4e-09
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	1e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-08
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	8e-08
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	5e-07
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	2e-06
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	2e-04
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	2e-04
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	9e-04

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score =  263 bits (674), Expect = 1e-86
 Identities = 98/291 (33%), Positives = 152/291 (52%), Gaps = 23/291 (7%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIFE--- 85
            A V+ ++G  EVL    N+ +P +  PNEV+V+  A S+NP+D  MRSGYG +      
Sbjct: 23  MAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKR 82

Query: 86  ---------PLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLS 136
                       PL LGRD+SG V   G  V+    G EV+ A+ P   +GT +++ V+S
Sbjct: 83  DPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWK-QGTLSEFVVVS 141

Query: 137 EDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRLLVLGGGGAVGFAAV 192
            +E++ KP S+TH  A+++P+ ALTAW A+     +++    G+R+L+LG  G VG  A+
Sbjct: 142 GNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAI 201

Query: 193 QFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK--GKFDAVLDTIGAPET 250
           Q   A   HV+A C   + + V   GA+  +DY S  +E  +K    FD +LD +G    
Sbjct: 202 QVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTE 261

Query: 251 ERLGLNFLKR--GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTW 299
                +FLK+  G  Y+TL        D  G+A G+      +  K ++ +
Sbjct: 262 TWA-PDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHF 311

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score =  260 bits (666), Expect = 4e-86
 Identities = 77/257 (29%), Positives = 129/257 (50%), Gaps = 5/257 (1%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYG--RSIFEPL 87
           +A+   +FG P+VL++  +   P+ + N++L++  A S+NP+D + R+G G      +  
Sbjct: 8   KAIQFDQFGPPKVLKLV-DTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNN 66

Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSV 147
           LP  LG D SGEV  +G+ V ++ +G +V G          YA+Y   S D +  K   +
Sbjct: 67  LPSGLGYDFSGEVIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKL 126

Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG 207
           +   A+++P A LTA +AL   A + +G  +L+  G G VG  A+Q +   G  V  T  
Sbjct: 127 SFLQAASLPTAGLTALQALN-QAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTAS 185

Query: 208 SKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
            ++   + A GAEQ ++Y  +D  LAI    DAV+D +G     +  ++ LK  G  +++
Sbjct: 186 KRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGGDVGIQS-IDCLKETGCIVSV 244

Query: 268 HGETAALADHYGLALGL 284
              TA            
Sbjct: 245 PTITAGRVIEVAKQKHR 261

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score =  219 bits (561), Expect = 6e-70
 Identities = 83/242 (34%), Positives = 119/242 (49%), Gaps = 9/242 (3%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
            A V+    GP VL     +  P   P +VLV+  A   NPLD ++R+G      +  LP
Sbjct: 9   IAAVVEEANGPFVLR---KLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAP-HAQQPLP 64

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALH-PTAVRGTYADYAVLSEDELTPKPVSVT 148
            ILG D++G V AVG  V S  VG  VFG       ++GT+A +A +    L  KP ++T
Sbjct: 65  AILGMDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALT 124

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
              AS +P   +TAW  L   A++ +GQ +L+ GGGG VG  A+Q ++A G  V AT   
Sbjct: 125 MRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATARG 184

Query: 209 KSIDRVLAAGAEQAVDYSSKD---IELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
             ++ V   GA         +    E      FD V DT+G P  +    + +KR GH +
Sbjct: 185 SDLEYVRDLGATPIDASREPEDYAAEHTAGQGFDLVYDTLGGPVLDA-SFSAVKRFGHVV 243

Query: 266 TL 267
           + 
Sbjct: 244 SC 245

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score =  208 bits (531), Expect = 3e-65
 Identities = 74/290 (25%), Positives = 111/290 (38%), Gaps = 30/290 (10%)

Query: 23  FLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRS 82
           F+      A+ +       V         P L  ++V VR  AV+INP DT MR  +   
Sbjct: 6   FIPPPQQTALTVNDHDEVTVWN---AAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF--- 59

Query: 83  IFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR----GTYADYAVLSED 138
                    LG D +G V AVG+ V  + VG  V+GA +    R    G ++ Y V    
Sbjct: 60  ---ATPWAFLGTDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGR 116

Query: 139 ELTPKPVSVTHADASAIPFAALTAWRALKC------------AARMSEGQRLLVLGGGGA 186
                P  ++   A+A+P    TA  A+K                 S+   +LV GG  A
Sbjct: 117 VWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTA 176

Query: 187 VGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVL 242
                +Q    SG    ATC   + D   + GAE+  DY + ++   I+          L
Sbjct: 177 TATVTMQMLRLSGYIPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYAL 236

Query: 243 DTIGAPETERLGLNFLKR-GGHYMTLHGETAALADHYGLALGLPIATTVL 291
           D I   E+       + R GGHY++L+      A    +     +  T+ 
Sbjct: 237 DCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIF 286

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score =  204 bits (522), Expect = 1e-64
 Identities = 53/241 (21%), Positives = 103/241 (42%), Gaps = 14/241 (5%)

Query: 30  RAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
               +  +      + +  +V++P L  +++LV+ +A+ INP+D +              
Sbjct: 3   EQHQVWAYQTKTHSVTLN-SVDIPALAADDILVQNQAIGINPVDWKFIKAN---PINWSN 58

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
             + G D +G +  VGA V S  +G+ V          G++A++ VL+ D +   P +++
Sbjct: 59  GHVPGVDGAGVIVKVGAKVDSKMLGRRVAYHTSLKR-HGSFAEFTVLNTDRVMTLPDNLS 117

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
              A+A+P   LTAW+A +    +++ + +L++G G  V     Q    +G  V     S
Sbjct: 118 FERAAALPCPLLTAWQAFE-KIPLTKQREVLIVGFGA-VNNLLTQMLNNAGYVVDLVSAS 175

Query: 209 KSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLH 268
            S       G        S+  +     K+ A+ D + +     L +  LK  GH + + 
Sbjct: 176 LSQALAAKRGVRHLYREPSQVTQ-----KYFAIFDAVNSQNAAAL-VPSLKANGHIICIQ 229

Query: 269 G 269
            
Sbjct: 230 D 230

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score =  195 bits (499), Expect = 1e-60
 Identities = 82/284 (28%), Positives = 133/284 (46%), Gaps = 29/284 (10%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           RAV +  FGGPEVL++R ++ VP  K ++VL++  A  +NP++T +RSG Y     +PLL
Sbjct: 31  RAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS---RKPLL 87

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P   G D++G + AVG +  +   G  VF +   +   G YA+YA+ ++  +   P  + 
Sbjct: 88  PYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTIS---GGYAEYALAADHTVYKLPEKLD 144

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
               +AI     TA+RAL  +A +  G+ +LV G  G VG AA Q + A G  +  T G+
Sbjct: 145 FKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGT 204

Query: 209 KS-IDRVLAAGAEQAVDYSSKDIELAIK----GK-FDAVLDTIGAPETERLGLNFLKRGG 262
           +     VL  GA +  ++   +    IK     K  D +++ +      +  L+ L  GG
Sbjct: 205 EEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSK-DLSLLSHGG 263

Query: 263 HYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ----TWYSY 302
             +             G    + I     + K       T +S 
Sbjct: 264 RVIV-----------VGSRGTIEINPRDTMAKESSIIGVTLFSS 296

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  195 bits (498), Expect = 1e-60
 Identities = 91/267 (34%), Positives = 126/267 (47%), Gaps = 35/267 (13%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           RAVV+   GGPEVLEV  ++ VP+  P EV VR +A ++N LD  +R G       +  L
Sbjct: 2   RAVVMRARGGPEVLEVA-DLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVAS---PKLPL 57

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPT-----------------------AV 125
           P +LG D SG V AVG  V     G EV      +                         
Sbjct: 58  PHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHR 117

Query: 126 RGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGG 185
            GTYA+Y VL E  L PKP +++  +A+AIP   LTAW+ +     +  G  +LV+  G 
Sbjct: 118 HGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGS 177

Query: 186 AVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIK----GK-FD 239
            V  AA+Q +   G  V AT GS+  + R  A GA++ V+Y+  D    ++    GK  D
Sbjct: 178 GVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGAD 237

Query: 240 AVLDTIGAPETERLGLNFLKRGGHYMT 266
            V+D  GA   E + +     GG    
Sbjct: 238 KVVDHTGALYFEGV-IKATANGGRIAI 263

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score =  192 bits (491), Expect = 2e-59
 Identities = 60/259 (23%), Positives = 112/259 (43%), Gaps = 22/259 (8%)

Query: 30  RAVVLPR---FGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEP 86
           +A+   +        + +   N+++P+ K +E+LV+ +++S+NP+DT+ R          
Sbjct: 4   KAIGFEQPFKLSDGNLFKTF-NLDIPEPKVHEILVKIQSISVNPVDTKQRLMDV-----S 57

Query: 87  LLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVS 146
             P +LG D  G V +VG  V     G  V+ +  P    G+ A+Y +++E  +   P +
Sbjct: 58  KAPRVLGFDAIGVVESVGNEVTMFNQGDIVYYSGSPDQ-NGSNAEYQLINERLVAKAPKN 116

Query: 147 VTHADASAIPFAALTAWRAL------KCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC 200
           ++   A ++P   +TA+  L            +EG+ LL++ G G VG  A Q + A G 
Sbjct: 117 ISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL 176

Query: 201 HVSATCGS-KSIDRVLAAGAEQAVDYSSKDIE----LAIKGKFDAVLDTIGAPETERLGL 255
            V  T    ++I+     GA+  +++    +       I+   D V  T          +
Sbjct: 177 RVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIEL-VDYVFCTFNTDMYYDDMI 235

Query: 256 NFLKRGGHYMTLHGETAAL 274
             +K  GH  T+       
Sbjct: 236 QLVKPRGHIATIVAFENDQ 254

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  188 bits (480), Expect = 1e-57
 Identities = 69/264 (26%), Positives = 105/264 (39%), Gaps = 34/264 (12%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           +         P  L++     VP+   ++++VRT AVS+N  D  +     G    +   
Sbjct: 29  QEWST-ETVAPHDLKLA-ERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMG---LDLAF 83

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPT--------------------AVRGT 128
           P +   D+SG V AVG SV     G  V     P                     A  G 
Sbjct: 84  PFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGV 143

Query: 129 YADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG 188
            ++Y VL E      P S+  A+AS +P A LTAW AL     +  G R++V G GG V 
Sbjct: 144 LSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGG-VA 202

Query: 189 FAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIK----GK-FDAVL 242
              +Q + A+G  V  T  S+  +DR  A GA+  ++   +D    +      +  D +L
Sbjct: 203 LFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHIL 262

Query: 243 DTIGAPETERLGLNFLKRGGHYMT 266
           +  G     +  L  +   G    
Sbjct: 263 EIAGGAGLGQS-LKAVAPDGRISV 285

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score =  185 bits (471), Expect = 2e-56
 Identities = 63/257 (24%), Positives = 110/257 (42%), Gaps = 18/257 (7%)

Query: 24  LVTTSCRAVVLPRFGG---PEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYG 80
           L   S +AV   +         L     +  P    +++LV  +AVS+NP+D ++R    
Sbjct: 18  LYFQSMKAVGYNKPAPITDDASLLDI-ELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTP 76

Query: 81  RSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDEL 140
               +     ++G D +G V+AVG  V     G EVF A       GT A++ ++ E  +
Sbjct: 77  P---DGTDWKVIGYDAAGIVSAVGPDVTLFRPGDEVFYAGSIIR-PGTNAEFHLVDERIV 132

Query: 141 TPKPVSVTHADASAIPFAALTAWRALKCAARMSE-----GQRLLVLGGGGAVGFAAVQFS 195
             KP ++  A+A+A+P  ++TAW A      +++        +L++GG G VG  AVQ +
Sbjct: 133 GRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIA 192

Query: 196 VA-SGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK---GKFDAVLDTIGAPET 250
              +   V AT    ++ + V + GA   +D+S            G    V  T    + 
Sbjct: 193 RQRTDLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAALGLGAPAFVFSTTHTDKH 252

Query: 251 ERLGLNFLKRGGHYMTL 267
                + +   G +  +
Sbjct: 253 AAEIADLIAPQGRFCLI 269

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score =  183 bits (468), Expect = 4e-56
 Identities = 74/281 (26%), Positives = 111/281 (39%), Gaps = 28/281 (9%)

Query: 26  TTSCRAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSI 83
           +   + +   +FG P +VL+V     +  LK NEV VR     INP D    +G Y    
Sbjct: 2   SLHGKLIQFHKFGNPKDVLQVE-YKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYA--- 57

Query: 84  FEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPK 143
               LP I G +  G V  VGA V    +G+ V          GT+ +Y   S D + P 
Sbjct: 58  HRIPLPNIPGYEGVGIVENVGAFVSRELIGKRVLPLRGE----GTWQEYVKTSADFVVPI 113

Query: 144 PVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVS 203
           P S+    A+ +    LTAW        +     LLV   G A+G    Q S      + 
Sbjct: 114 PDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLI 173

Query: 204 ATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIK----GK-FDAVLDTIGAPETERLGLNF 257
           A   +    + +L  GA   +D S+  +   +     G   DA +D+IG P+   L    
Sbjct: 174 AVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNEL-AFS 232

Query: 258 LKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQT 298
           L+  GH++T            GL  G+ +    ++ K    
Sbjct: 233 LRPNGHFLT-----------IGLLSGIQVNWAEIVTKAKVH 262

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  178 bits (454), Expect = 7e-54
 Identities = 72/287 (25%), Positives = 117/287 (40%), Gaps = 33/287 (11%)

Query: 25  VTTSCRAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRS 82
           +    RA+V    G P +V+E++ N+E+  ++ ++V V+  A  INP D  M  G YG  
Sbjct: 23  MPARVRALVYGHHGDPAKVVELK-NLELAAVRGSDVRVKMLAAPINPSDINMIQGNYG-- 79

Query: 83  IFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTP 142
              P LP + G +   +V AVG++V  L  G  V  A       GT+   AV SE+ L  
Sbjct: 80  -LLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGL---GTWRTEAVFSEEALIQ 135

Query: 143 KPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHV 202
            P  +    A+ +     TA+R L    ++  G  ++       VG A +Q + A G   
Sbjct: 136 VPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRT 195

Query: 203 SATCGS-----KSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETER 252
                      K  DR+ + GAE  +                  +    L+ +G   +  
Sbjct: 196 INVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTE 255

Query: 253 LGLNFLKRGGHYMTLHGETAALADHYGLALG--LPIATTVLLKKRMQ 297
           L L  L RGG  +T           YG      +  + ++L+ K ++
Sbjct: 256 L-LRQLARGGTMVT-----------YGGMAKQPVVASVSLLIFKDLK 290

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score =  178 bits (453), Expect = 8e-54
 Identities = 80/244 (32%), Positives = 116/244 (47%), Gaps = 15/244 (6%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           R V L  FGGP+V+ +     +P     EVLVR  A+ +N  D   R G Y         
Sbjct: 30  RFVDLKSFGGPDVMVIG-KRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYP---PPKDA 85

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
             ILG ++SGE+  VG  V    VG +V G  +     G YA+Y +L   ++ P P    
Sbjct: 86  SPILGLELSGEIVGVGPGVSGYAVGDKVCGLAN----GGAYAEYCLLPAGQILPFPKGYD 141

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
              A+A+P    T W  L   A ++EG+ +L+ GG   +G  A+Q + A G  V AT GS
Sbjct: 142 AVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGS 201

Query: 209 KS-IDRVLAAGAEQAVDYSSKDIELAIK---GK-FDAVLDTIGAPETERLGLNFLKRGGH 263
               +     GA++ ++Y S+D    IK   G+  D +LD IGA   ER  +  L + G 
Sbjct: 202 TGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAAYFER-NIASLAKDGC 260

Query: 264 YMTL 267
              +
Sbjct: 261 LSII 264

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score =  174 bits (443), Expect = 2e-52
 Identities = 68/278 (24%), Positives = 110/278 (39%), Gaps = 22/278 (7%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           RAVVL  FGG   L +     +P+ +  E+ +R +A  +N +D  +R G        P  
Sbjct: 5   RAVVLAGFGGLNKLRLF-RKAMPEPQDGELKIRVKACGLNFIDLMVRQGNID---NPPKT 60

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           PL+ G + SG V A+G SV+   +G  V   ++       +A+      + +   P  ++
Sbjct: 61  PLVPGFECSGIVEALGDSVKGYEIGDRVMAFVN----YNAWAEVVCTPVEFVYKIPDDMS 116

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
            ++A+A P   +TA+  L   A + EG  +LV   GG VG A  Q              S
Sbjct: 117 FSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTAS 176

Query: 209 KSIDRVLAAGAEQAVDYSSKDIELAIK---GK-FDAVLDTIGAPETERLGLNFLKRGGHY 264
                 +        D  + D    +K    +  D VLD +    T + GL+ LK  G Y
Sbjct: 177 TFKHEAIKDSVTHLFDR-NADYVQEVKRISAEGVDIVLDCLCGDNTGK-GLSLLKPLGTY 234

Query: 265 MT---LHGETAALADHYGLALGLPIATTV----LLKKR 295
           +     +  T      +  A        V    L ++ 
Sbjct: 235 ILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEEN 272

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score =  171 bits (436), Expect = 3e-51
 Identities = 72/242 (29%), Positives = 101/242 (41%), Gaps = 17/242 (7%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
            AV   + GGPE L V+  V  P     EVL++  A ++N  D   R G Y      P  
Sbjct: 24  LAVHFDKPGGPENLYVK-EVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDP---PPGA 79

Query: 89  PLILGRDISGEVAAVGASVRS-LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSV 147
             ILG + SG VA +G   +    +G      L      G  A Y  + E  L P P  +
Sbjct: 80  SNILGLEASGHVAELGPGCQGHWKIGDTAMALLP----GGGQAQYVTVPEGLLMPIPEGL 135

Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG 207
           T   A+AIP A LTA++ L     +  G  +L+  G   VG AA+Q +  +G     T G
Sbjct: 136 TLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAG 195

Query: 208 SKS-IDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRG 261
           S+  +      GA    +Y  +D   A          + +LD IG    E+  +N L   
Sbjct: 196 SQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEK-NVNCLALD 254

Query: 262 GH 263
           G 
Sbjct: 255 GR 256

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  168 bits (428), Expect = 3e-49
 Identities = 65/300 (21%), Positives = 101/300 (33%), Gaps = 64/300 (21%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFE---- 85
            A +  R   P       +V VP+L P E LV   A S+N            S F     
Sbjct: 44  FAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLER 103

Query: 86  -----------PLLPLILGRDISGEVAAVGASVRSLTVGQEV------------------ 116
                       L   ++G D++G V   G  V +   G EV                  
Sbjct: 104 YGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDT 163

Query: 117 -----FGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL--KCA 169
                          G  A+ A++  ++L PKP  ++  +A+A      TA+R L  +  
Sbjct: 164 MLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNG 223

Query: 170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSK 228
           A M +G  +L+ G  G +G  A QF++A G +      S    +   A GAE  +D +++
Sbjct: 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAE 283

Query: 229 DI----------------------ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMT 266
                                   EL      D V +  G        +   ++GG   T
Sbjct: 284 GYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGAS-VFVTRKGGTITT 342

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  168 bits (426), Expect = 5e-49
 Identities = 67/292 (22%), Positives = 96/292 (32%), Gaps = 65/292 (22%)

Query: 38  GGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFE------------ 85
              + L +   V +P+L P+EVLV   A SIN              F             
Sbjct: 45  DVRKSLRLG-EVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWA 103

Query: 86  ---PLLPLILGRDISGEVAAVGASVRSLTVGQEV-----------------------FGA 119
                   +LG D SG V   G  VR    G  V                         A
Sbjct: 104 TRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRA 163

Query: 120 LHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL--KCAARMSEGQR 177
                  G  A+Y V+   +L PKP  +T  +A+  P  A TA+R L     A+M +G  
Sbjct: 164 WGFETNFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDI 223

Query: 178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKD------- 229
           +L+ G  G +G  A+QF    G    A   S      V A G +  ++ +          
Sbjct: 224 VLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIAD 283

Query: 230 ---------------IELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMT 266
                          +      + D V +  G   T  L +   +RGG  +T
Sbjct: 284 DPRRVVETGRKLAKLVVEKAGREPDIVFEHTG-RVTFGLSVIVARRGGTVVT 334

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score =  165 bits (419), Expect = 6e-49
 Identities = 59/241 (24%), Positives = 105/241 (43%), Gaps = 13/241 (5%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
            A V+ + GGP+       V+V    P +V +R  A+ +N LDT  R+G    +     P
Sbjct: 3   MAAVIHKKGGPDNFVWE-EVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPP 61

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKP--VSV 147
           +++G + +  V  VG  V   TVG+ V   L P    G Y+   +   ++L   P  + +
Sbjct: 62  IVVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPL---GAYSQERLYPAEKLIKVPKDLDL 118

Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG 207
                + +    +TA   L    ++  G  +L+    G +G   V ++   G  V  T  
Sbjct: 119 DDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVS 178

Query: 208 SKS-IDRVLAAGAEQAVDYSSKDIELAIK----GK-FDAVLDTIGAPETERLGLNFLKRG 261
           ++   +     G    ++YS++D    ++    GK  D V D+IG  +T +  L+ L+  
Sbjct: 179 TEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGK-DTLQKSLDCLRPR 237

Query: 262 G 262
           G
Sbjct: 238 G 238

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score =  161 bits (411), Expect = 7e-48
 Identities = 74/242 (30%), Positives = 106/242 (43%), Gaps = 16/242 (6%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           + +     GGPEVLE   + E     P  V+VR +A+ +N +DT  RSG Y      P L
Sbjct: 3   KRIQFSTVGGPEVLEYV-DFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPA----PFL 57

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P  LG + +G V AVG  V    VG  V     P    G Y++  VL E  L     SV+
Sbjct: 58  PSGLGAEGAGVVEAVGDEVTRFKVGDRVAYGTGPL---GAYSEVHVLPEANLVKLADSVS 114

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
              A+A+    LT    L+   ++  G+ +L     G VG  A Q++ A G  +  T  S
Sbjct: 115 FEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSS 174

Query: 209 KS-IDRVLAAGAEQAVDYSSKDIELAIK----GK-FDAVLDTIGAPETERLGLNFLKRGG 262
                   A GA + +DYS +D+   +     GK    V D +G  +T    L+ +   G
Sbjct: 175 PEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQ-DTWLTSLDSVAPRG 233

Query: 263 HY 264
             
Sbjct: 234 LV 235

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  162 bits (412), Expect = 8e-48
 Identities = 50/270 (18%), Positives = 94/270 (34%), Gaps = 30/270 (11%)

Query: 30  RAVVLPRFGGPE------------VLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRS 77
           +A++L   G  +             LE    + VP   P++VL++    SINP D     
Sbjct: 12  KALLLVGDGYTKTPSGSALEAMEPYLEQG-RIAVPAPGPSQVLIKVNLASINPSDVAFIK 70

Query: 78  G-YGRSIFEPLLPLILGRDISGEVAAVGASVRS-LTVGQEVFGALHPTAVRGTYADYAVL 135
           G YG      +     G +  G + A G    +   VG+ V       +  G++A+YAV 
Sbjct: 71  GQYG---QPRVKGRPAGFEGVGTIVAGGDEPYAKSLVGKRVA-FATGLSNWGSWAEYAVA 126

Query: 136 SEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFS 195
                 P   +V   D +A+    LTA        +    +  ++  G   +    +  +
Sbjct: 127 EAAACIPLLDTVRDEDGAAMIVNPLTAIAMFD-IVKQEGEKAFVMTAGASQLCKLIIGLA 185

Query: 196 VASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPE 249
              G     T      I  +   GA   ++  + D E  ++      +    LD +  P 
Sbjct: 186 KEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTGPL 245

Query: 250 TERLGLNFLKRGGHYMT---LHGETAALAD 276
              +  N + +   ++    L  +   + +
Sbjct: 246 ASAI-FNAMPKRARWIIYGRLDPDATVIRE 274

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score =  161 bits (410), Expect = 1e-47
 Identities = 69/242 (28%), Positives = 109/242 (45%), Gaps = 16/242 (6%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
             +   + GGPEVL+        D   NE+ V  +A+ IN +DT +RSG Y      P L
Sbjct: 3   TRIEFHKHGGPEVLQAV-EFTPADPAENEIQVENKAIGINFIDTYIRSGLYPP----PSL 57

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P  LG + +G V+ VG+ V+ +  G  V  A       G Y+    +  D+    P +++
Sbjct: 58  PSGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSAL---GAYSSVHNIIADKAAILPAAIS 114

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
              A+A     LT +  L+    +   ++ L     G VG  A Q++ A G  +  T G+
Sbjct: 115 FEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGT 174

Query: 209 KS-IDRVLAAGAEQAVDYSSKDIELAIK----GK-FDAVLDTIGAPETERLGLNFLKRGG 262
                  L AGA Q ++Y  +D+   +K    GK    V D++G  +T    L+ L+R G
Sbjct: 175 AQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGR-DTWERSLDCLQRRG 233

Query: 263 HY 264
             
Sbjct: 234 LM 235

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score =  160 bits (408), Expect = 3e-47
 Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 17/230 (7%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           +A+      GPE L    +VE P   PN V+V  +A  +   D  M  G Y     +   
Sbjct: 23  KAIQAQSLSGPEGLVYT-DVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEY---QLKMEP 78

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P + G + +G V +       +  G  V          G YA+   ++   + P P  + 
Sbjct: 79  PFVPGIETAGVVRSAPE-GSGIKPGDRVMAFNFI----GGYAERVAVAPSNILPTPPQLD 133

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
            A+A A+     T + A     ++  G+ +LVLG  G +G AA+Q +   G  V A    
Sbjct: 134 DAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNR 193

Query: 209 KS-IDRVLAAGAEQAVDYSSKDIELAIK----GK-FDAVLDTIGAPETER 252
            +  + V + GA+  +    +    A++    G   D V+D IG P  + 
Sbjct: 194 TAATEFVKSVGADIVLPL-EEGWAKAVREATGGAGVDMVVDPIGGPAFDD 242

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score =  160 bits (406), Expect = 1e-46
 Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 18/244 (7%)

Query: 27  TSCRAVVLPRFG--GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
           +  + +V+ R      E + +  +  VP     ++LVR R V +N  D    +G  R   
Sbjct: 22  SMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAG--RYDP 79

Query: 85  EPLLPLILGRDISGEVAAVGASVRS-LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPK 143
               P  +G +  GEV A+G S  +  TVGQ V          G++A+Y V+     TP 
Sbjct: 80  SVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAP-----GSFAEYTVVPASIATPV 134

Query: 144 PVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVS 203
           P      +   +  +  TA+ +LK    +SEG+++LV    G  G  A+Q S  + CHV 
Sbjct: 135 PSVK--PEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVI 192

Query: 204 ATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIK---GK-FDAVLDTIGAPETERLGLNFL 258
            TC S      + + G ++ ++Y ++ +   +K    +  D V +++G    +   ++ L
Sbjct: 193 GTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDL-AVDAL 251

Query: 259 KRGG 262
              G
Sbjct: 252 ATKG 255

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  156 bits (395), Expect = 4e-45
 Identities = 58/273 (21%), Positives = 100/273 (36%), Gaps = 40/273 (14%)

Query: 30  RAVVLPRFGGP-EVLEVRPN-VEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YG------ 80
           +AV+  + G P +VL  +   ++  +L PNEV+V+T    +NP D     G Y       
Sbjct: 5   QAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKT 64

Query: 81  RSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDEL 140
                       G +   EV  VG++V SL  G  V  +       GT+  +A+ ++D+ 
Sbjct: 65  TGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNF---GTWRTHALGNDDDF 121

Query: 141 TP-----------KPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVL-GGGGAVG 188
                        KP  +T    + I    LTA+  L    +++ G+   +  GG  AVG
Sbjct: 122 IKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVG 181

Query: 189 FAAVQFSVASGCHVSATCGSKS-----IDRVLAAGAEQAVDYSS----------KDIELA 233
             A Q       +  +    +      +  +   GA Q +              K+    
Sbjct: 182 KYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQ 241

Query: 234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMT 266
             G+    L+ +G   +  +    L   G  +T
Sbjct: 242 SGGEAKLALNCVGGKSSTGI-ARKLNNNGLMLT 273

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score =  151 bits (384), Expect = 1e-43
 Identities = 61/249 (24%), Positives = 105/249 (42%), Gaps = 21/249 (8%)

Query: 25  VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
           +    + +++   GG +V++   +  VP +   E+L++ +   +N +++  R G    I+
Sbjct: 5   IPEQQKVILIDEIGGYDVIKYE-DYPVPSISEEELLIKNKYTGVNYIESYFRKG----IY 59

Query: 85  EPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYA-VLSEDELTPK 143
               P +LGR+ SG V A G  V +  VG +V           T+A Y+ + S+  +   
Sbjct: 60  PCEKPYVLGREASGTVVAKGKGVTNFEVGDQVA-----YISNSTFAQYSKISSQGPVMKL 114

Query: 144 PVSVTHADAS---AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC 200
           P   +  +     A     LTA      A  + +G  +L+    G VG    Q     G 
Sbjct: 115 PKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA 174

Query: 201 HVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIK----GK-FDAVLDTIGAPETERLG 254
           H  A   +   +      GAE  ++ S +DI   +     GK  DA  D++G  +T  + 
Sbjct: 175 HTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGK-DTFEIS 233

Query: 255 LNFLKRGGH 263
           L  LKR G 
Sbjct: 234 LAALKRKGV 242

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score =  144 bits (366), Expect = 2e-41
 Identities = 68/220 (30%), Positives = 98/220 (44%), Gaps = 24/220 (10%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           +A VL R GGP  L   P    P+ +  EV++R  AV +N  D  MR G Y         
Sbjct: 2   KAWVLKRLGGPLELVDLP---EPEAEEGEVVLRVEAVGLNFADHLMRLGAYL---TRLHP 55

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
           P I G ++ G V            G+     +     +G  A+   + +  L P P  ++
Sbjct: 56  PFIPGMEVVGVV-----------EGRRYAALVP----QGGLAERVAVPKGALLPLPEGLS 100

Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208
             +A+A P + LTA+ ALK  A+   G+++LV    GA+G AAVQ + A G  V A    
Sbjct: 101 PEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR 159

Query: 209 KS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGA 247
              +   LA GAE+A  Y+         G  D VL+  G 
Sbjct: 160 PEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGK 199

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  142 bits (360), Expect = 3e-40
 Identities = 67/272 (24%), Positives = 113/272 (41%), Gaps = 43/272 (15%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGY-----GRSIF 84
           RAV L   G P  L+    + VP  K  +VL++  A  +   D  MR G           
Sbjct: 2   RAVRLVEIGKPLSLQ---EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58

Query: 85  EPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHP---------------------- 122
              LP+ LG +I+G++  VG  V   + G  V  A++P                      
Sbjct: 59  GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLV--AVNPWQGEGNCYYCRIGEEHLCDSPR 116

Query: 123 ---TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLL 179
                  G YA+Y ++   +   K   +   +A+ +  + +T +RA++  A +   + LL
Sbjct: 117 WLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVR-KASLDPTKTLL 175

Query: 180 VLGGGGAVGFAAVQFSVA-SGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIK-- 235
           V+G GG +G  AVQ + A SG  +      +  ++    AGA+  ++ S +D    I+  
Sbjct: 176 VVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRI 235

Query: 236 ---GKFDAVLDTIGAPETERLGLNFLKRGGHY 264
                 DAV+D   + +T  +    L + G Y
Sbjct: 236 TESKGVDAVIDLNNSEKTLSVYPKALAKQGKY 267

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score =  137 bits (346), Expect = 7e-38
 Identities = 47/307 (15%), Positives = 89/307 (28%), Gaps = 43/307 (14%)

Query: 26  TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG------- 78
            ++ +     +  G   L +  +++ P   P+EVL+R  A  +NP D  +  G       
Sbjct: 3   HSALQLRSRIKSSGELELSLD-SIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTA 61

Query: 79  -------------------YGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGA 119
                                         + +G + +G V   G+S  +  +  +   A
Sbjct: 62  KASGTAERPIVTARVPEGAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAA 121

Query: 120 LHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLL 179
           +        Y+ Y  +  D+    P   T AD ++     LTA   ++   R+     L+
Sbjct: 122 IGG----AMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMVET-MRLEGHSALV 176

Query: 180 VLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDI-----ELA 233
                  +G    Q  +  G  +      +   D + A GA    + +S        E  
Sbjct: 177 HTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQDLTEAL 236

Query: 234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADH-----YGLALGLPIAT 288
           +        D  G  +     L  ++   +             H     YG     P   
Sbjct: 237 VSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTSPTEF 296

Query: 289 TVLLKKR 295
                  
Sbjct: 297 NRNFGMA 303

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  117 bits (295), Expect = 1e-30
 Identities = 63/306 (20%), Positives = 108/306 (35%), Gaps = 49/306 (16%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           +A  L  +  P  +E   +V+ P L+   +V+VR     +   D  +  G    + +P L
Sbjct: 17  KAARLHEYNKPLRIE---DVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKL 73

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPT-----------------------AV 125
           P  LG +  G +  V   V  L  G  V      T                        +
Sbjct: 74  PYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNI 133

Query: 126 RGTYADYAVLSEDELTPKPVSV---THADASAIPFAALTAWRALKCAAR-MSEGQRLLVL 181
            G +A++   S   +   P  +      + + +  A +TA+RA+K AAR +  G  + ++
Sbjct: 134 DGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIV 193

Query: 182 GGGGAVGFAAVQFSVASG-CHVSAT-CGSKSIDRVLAAGAEQAVDYSSKDIELAIK---- 235
           G GG +G  AVQ         V A     + +      GA+  VD + +D    +     
Sbjct: 194 GVGG-LGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVD-ARRDPVKQVMELTR 251

Query: 236 -GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKK 294
               +  +D +G+  T       L R G    + G        YG  L  P    +  + 
Sbjct: 252 GRGVNVAMDFVGSQATVDYTPYLLGRMGRL-IIVG--------YGGELRFPTIRVISSEV 302

Query: 295 RMQTWY 300
             +   
Sbjct: 303 SFEGSL 308

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  115 bits (290), Expect = 4e-30
 Identities = 57/307 (18%), Positives = 107/307 (34%), Gaps = 52/307 (16%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A +L +F  P  L +  +V +P+ +  EVL+R     +   D R+  G         LP
Sbjct: 5   KAALLKKFSEP--LSIE-DVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQ-GFRLP 60

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPT-----------------------AVR 126
           +ILG + +G +  VG  +  +  G  V                                 
Sbjct: 61  IILGHENAGTIVEVG-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTN 119

Query: 127 GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE--GQRLLVLGGG 184
           G +++Y ++       K  S++  +A+ +  A  T+  A++ A        + ++++ G 
Sbjct: 120 GGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGI 179

Query: 185 GAVGFAAVQFSVA--SGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIK-----G 236
           G +    +Q   A      +     SK   D  L  GA+   +   KD E  I       
Sbjct: 180 GGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSE--MKDAESLINKLTDGL 237

Query: 237 KFDAVLDTIGAPETERLGLNFLKRGGHYMT--LHGETAALADHYGLALGLPIATTVLLKK 294
                +D +G  ET       L + G  +   + G+           + L    T +  K
Sbjct: 238 GASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKR----------VSLEAFDTAVWNK 287

Query: 295 RMQTWYS 301
           ++     
Sbjct: 288 KLLGSNY 294

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  113 bits (286), Expect = 2e-29
 Identities = 59/277 (21%), Positives = 89/277 (32%), Gaps = 54/277 (19%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +AV     G   V+    ++  P   P E+L++  A  +   D  +           L P
Sbjct: 2   KAVQYTEIGSEPVVV---DIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGL-P 57

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEV---------------------------FGALHP 122
           L LG +  G VA +G  V    VG  V                            G   P
Sbjct: 58  LTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPP 117

Query: 123 -TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK-CAARMSEGQRLLV 180
                G+ A+Y ++           +    A+ +  A LT + A+      +  G   +V
Sbjct: 118 GLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVV 177

Query: 181 LGGGGAVGFAAVQFSVASGC-HVSATCGSKSIDR-------VLAAGAEQAVDYSSKDIEL 232
           +G GG +G   +Q   A     V A      +D            GA+ AV  S      
Sbjct: 178 IGVGG-LGHVGIQILRAVSAARVIA------VDLDDDRLALAREVGADAAVK-SGAGAAD 229

Query: 233 AIKGK-----FDAVLDTIGAPETERLGLNFLKRGGHY 264
           AI+         AV D +GA  T       +   GH 
Sbjct: 230 AIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHI 266

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  105 bits (265), Expect = 2e-26
 Identities = 67/270 (24%), Positives = 103/270 (38%), Gaps = 53/270 (19%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRS------- 82
           +A V+  FG P  L +   V VP   P +V V+  A           SG   +       
Sbjct: 4   KAAVVRAFGAP--LTID-EVPVPQPGPGQVQVKIEA-----------SGVCHTDLHAADG 49

Query: 83  --IFEPLLPLILGRDISGEVAAVGASVRSLTVGQEV------------------------ 116
               +P LP I G +  G V+AVG+ V  +  G  V                        
Sbjct: 50  DWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCE 109

Query: 117 FGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQ 176
                  +V G Y +Y V   + +   P  V   + + I  A +T ++ LK       GQ
Sbjct: 110 KQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLK-VTDTRPGQ 168

Query: 177 RLLVLGGGGAVGFAAVQFSVASGCHVSA-TCGSKSIDRVLAAGAEQAVDYSSKDIELAIK 235
            +++ G GG  G  AVQ++ A G  V+A       ++     GAE AV+    D    ++
Sbjct: 169 WVVISGIGGL-GHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQ 227

Query: 236 ---GKFDAVLDTIGAPETERLGLNFLKRGG 262
              G    VL T  +P+     +  ++RGG
Sbjct: 228 KEIGGAHGVLVTAVSPKAFSQAIGMVRRGG 257

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score =  105 bits (265), Expect = 1e-25
 Identities = 60/221 (27%), Positives = 85/221 (38%), Gaps = 26/221 (11%)

Query: 52  PDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPL--ILGRDISGEVAAVGASVRS 109
             L   EV +  RA  +N  D  +  G        + P    LG + +G V   G  V  
Sbjct: 234 APLGDGEVRIAMRAAGVNFRDALIALG--------MYPGVASLGSEGAGVVVETGPGVTG 285

Query: 110 LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCA 169
           L  G  V G      +   +   AV     +T  P   + A A+++P   LTA+ AL   
Sbjct: 286 LAPGDRVMGM-----IPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDL 340

Query: 170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD 229
           A +  G+ LLV    G VG AA+Q +   G  V AT       + +    E     SS+ 
Sbjct: 341 AGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDK-WQAVELSREHL--ASSRT 397

Query: 230 ------IELAIKGK-FDAVLDTIGAPETERLGLNFLKRGGH 263
                    A  G+  D VL+++   E     L  L RGG 
Sbjct: 398 CDFEQQFLGATGGRGVDVVLNSLAG-EFADASLRMLPRGGR 437

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  100 bits (252), Expect = 9e-25
 Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 45/304 (14%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
           +A V+ +F  P  L+++  VE P +   EVLVR +A  +   D     G +     +P L
Sbjct: 2   KAAVVEQFKEP--LKIK-EVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWP---VKPKL 55

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEV------------------------FGALHPTA 124
           PLI G +  G V  VG  V  L VG  V                               +
Sbjct: 56  PLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYS 115

Query: 125 VRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGG 184
           V G YA+Y   + D +   P +++  +A+ I  A +T ++ALK       G+ + + G G
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALK-VTGAKPGEWVAIYGIG 174

Query: 185 GAVGFAAVQFSVASGCHVSA-TCGSKSIDRVLAAGAEQAVDYSSKDIELAIK---GKFDA 240
           G +G  AVQ++ A G +V A   G + ++     GA+  V+   +D    +K   G   A
Sbjct: 175 G-LGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHA 233

Query: 241 VLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWY 300
            + T  +    +   N ++RGG    L G            + +PI  TVL   ++    
Sbjct: 234 AVVTAVSKPAFQSAYNSIRRGGA-CVLVGLPPE-------EMPIPIFDTVLNGIKIIGSI 285

Query: 301 SYGI 304
               
Sbjct: 286 VGTR 289

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score = 99.2 bits (248), Expect = 5e-24
 Identities = 54/269 (20%), Positives = 100/269 (37%), Gaps = 38/269 (14%)

Query: 25  VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDT-RMRSGYGRSI 83
           +  + + V+     G   LE + ++ VP  K NE+L+  +   +   D       +    
Sbjct: 2   IPETQKGVIFYESHGK--LEYK-DIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLP- 57

Query: 84  FEPLLPLILGRDISGEVAAVGASVRSLTVGQEV------------------------FGA 119
               LPL+ G + +G V  +G +V+   +G                              
Sbjct: 58  --VKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHAD 115

Query: 120 LHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLL 179
           L      G++  YA     +    P     A  + I  A +T ++ALK +A +  G  + 
Sbjct: 116 LSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALK-SANLMAGHWVA 174

Query: 180 VLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYS-SKDIELAIK-- 235
           + G  G +G  AVQ++ A G  V    G +   +   + G E  +D++  KDI  A+   
Sbjct: 175 ISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKA 234

Query: 236 --GKFDAVLDTIGAPETERLGLNFLKRGG 262
             G    V++   +         +++  G
Sbjct: 235 TDGGAHGVINVSVSEAAIEASTRYVRANG 263

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score = 95.0 bits (237), Expect = 2e-22
 Identities = 60/272 (22%), Positives = 100/272 (36%), Gaps = 51/272 (18%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +AV L        + VR NV +P+  P+++LV+  A  I   D  +  G   S      P
Sbjct: 25  KAVRLE---SVGNISVR-NVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPSTP----P 76

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHP-------------------------TA 124
           + LG +  G V   G++VR +  G  +     P                           
Sbjct: 77  VTLGHEFCGIVVEAGSAVRDIAPGARI--TGDPNISCGRCPQCQAGRVNLCRNLRAIGIH 134

Query: 125 VRGTYADYAVLSEDELTPKPVSVTHADASAI-PFAALTAWRALKCAARMSEGQRLLVLGG 183
             G +A+Y ++   +    P+++     +   P A       +   + +  G  + +L G
Sbjct: 135 RDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLA--CCLHGVD-LSGIKAGSTVAIL-G 190

Query: 184 GGAVGFAAVQFSVASGCH---VSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK----- 235
           GG +G   VQ +  +G     +S    +K        GA   VD S+ D+  AI      
Sbjct: 191 GGVIGLLTVQLARLAGATTVILSTRQATK-RRLAEEVGATATVDPSAGDVVEAIAGPVGL 249

Query: 236 --GKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
             G  D V++  G  ET +      K GG  +
Sbjct: 250 VPGGVDVVIECAGVAETVKQSTRLAKAGGTVV 281

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 91.9 bits (228), Expect = 8e-21
 Identities = 49/229 (21%), Positives = 87/229 (37%), Gaps = 25/229 (10%)

Query: 47   PNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP--LILGRDISGEVAAVG 104
            P          + L      S+N  D  + +G         L    I G+ ++ +     
Sbjct: 1550 PLHYALPASCQDRLCSVYYTSLNFRDVMLATG--------KLSPDSIPGKWLTRDCMLGM 1601

Query: 105  ASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164
                    G+ V G +    +    A   +L +      P + T  +A+++P    TA+ 
Sbjct: 1602 EFSGRDASGRRVMGMVPAEGL----ATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYY 1657

Query: 165  ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVD 224
            +L    RM  G+ +L+  G G VG AA+  +++ GC V  T GS      L A   Q  +
Sbjct: 1658 SLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDE 1717

Query: 225  ---YSSKD------IELAIKGK-FDAVLDTIGAPETERLGLNFLKRGGH 263
                +S+D      +     GK  D VL+++   + +   +  L + G 
Sbjct: 1718 TCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQA-SVRCLAQHGR 1765

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score = 90.4 bits (225), Expect = 1e-20
 Identities = 57/294 (19%), Positives = 97/294 (32%), Gaps = 55/294 (18%)

Query: 22  RFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGR 81
             ++     A+VL +F  P V +     E+ D+    +LV   +  +   D  M  G   
Sbjct: 11  HHMMGLKAHAMVLEKFNQPLVYK---EFEISDIPRGSILVEILSAGVCGSDVHMFRG--- 64

Query: 82  SIFEPLLPLILGRDISGEVAAVGASVRSLT-----VGQEVFGALHPT------------- 123
                 LP+ILG + +G V  V    R L       G  +      T             
Sbjct: 65  EDPRVPLPIILGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEP 124

Query: 124 -------------------AVRGTYADYAVLS-EDELTPKPVSVTHADASAIPFAALTAW 163
                               +RG Y+ + VL  E ++            +    +  TA+
Sbjct: 125 YLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAY 184

Query: 164 RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDRVLAAGAEQ 221
            A         G+ +++ G G  +G   V  + + G  +V    GS + +      GA+ 
Sbjct: 185 HAFDEYPESFAGKTVVIQGAGP-LGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADL 243

Query: 222 AV---DYSSKDIELAIKGK-----FDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
            +   + S ++   AI         D +L+  G       G   L+RGG Y   
Sbjct: 244 TLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVA 297

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score = 84.5 bits (210), Expect = 7e-19
 Identities = 60/275 (21%), Positives = 94/275 (34%), Gaps = 56/275 (20%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           RA+        E L +  +  VP+  P E+LVR  A SI   D  +      +      P
Sbjct: 2   RALAK--LAPEEGLTLV-DRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEV--------------------------FGALHPT 123
           L+ G + SG V AVG  VR   VG  V                             +   
Sbjct: 59  LVTGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRD 118

Query: 124 AVRGTYADYAVLSEDELTPKPVSVTHADASAI-PFA-ALTAWRALKCAARMSEGQRLLVL 181
              G +A+Y V+  +     P  +    A+ + PF  A+        A     G+ +L+ 
Sbjct: 119 ---GGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVY----AGSGVSGKSVLIT 171

Query: 182 GGGGAVGFAAVQFSVASGC-HVSATCGSKSIDRV-----LA-AGAEQAVDYSSKDIELAI 234
            G G +G  A     ASG   +  +      D        A   A++ V+   +D+   +
Sbjct: 172 -GAGPIGLMAAMVVRASGAGPILVS------DPNPYRLAFARPYADRLVNPLEEDLLEVV 224

Query: 235 K----GKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
           +       + +L+  G       GL  L  GG   
Sbjct: 225 RRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEAR 259

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score = 84.6 bits (210), Expect = 8e-19
 Identities = 55/271 (20%), Positives = 94/271 (34%), Gaps = 50/271 (18%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           ++VV        ++ V     +P++K  +EV V+  +  +   D       G   +    
Sbjct: 2   KSVVND---TDGIVRVA-ESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYY---- 53

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEV--------------------------FGALHP 122
           P+ LG + SG + AVG+ V  L  G  V                          F     
Sbjct: 54  PITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRR 113

Query: 123 TAVRGTYADYAVLSEDELTPKPVSVTHADASAI-PFAALTAWRALKCAARMSEGQRLLVL 181
               G +A+Y V+    +   P  +   D + I P        A    A+  E + ++++
Sbjct: 114 D---GGFAEYIVVKRKNVFALPTDMPIEDGAFIEPIT--VGLHAFHL-AQGCENKNVIII 167

Query: 182 GGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIK---- 235
            G G +G  A+Q +VA G   V+A   S   +    + GA Q  + S             
Sbjct: 168 -GAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRE 226

Query: 236 -GKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
                 +L+T G P+T  L +          
Sbjct: 227 LRFNQLILETAGVPQTVELAVEIAGPHAQLA 257

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score = 84.6 bits (210), Expect = 8e-19
 Identities = 57/273 (20%), Positives = 97/273 (35%), Gaps = 47/273 (17%)

Query: 30  RAVVLPRFGGPEV-LEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
            A++      P    E+   V+VP   P EVL++  A SI   D  +      +      
Sbjct: 6   VAIMKT---KPGYGAELV-EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKP 61

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEV--------------------------FGALHP 122
           P I+G +++GEV  +G  V  + VG  V                             +  
Sbjct: 62  PQIMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDT 121

Query: 123 TAVRGTYADYAVLSEDELTPKPVSVTHADASAI-PFAALTAWRALKCAARMSEGQRLLVL 181
               G +A+YAV+    +   P S+    A+   P     A   +        G+ +L+ 
Sbjct: 122 D---GVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLG--NAVDTVLAGPI--SGKSVLIT 174

Query: 182 GGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDRVLAAGAEQAVDYSSKDI-----ELAI 234
            G G +G   +  + ASG   V  +  S    +     GA+  ++   +D+     ++  
Sbjct: 175 -GAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITD 233

Query: 235 KGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
               D  L+  GAP+    GL  +   G    L
Sbjct: 234 GNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLL 266

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score = 83.8 bits (208), Expect = 1e-18
 Identities = 58/273 (21%), Positives = 99/273 (36%), Gaps = 47/273 (17%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
            + VL        L +     +P+ K +EVL++   V I   D         + F    P
Sbjct: 6   LSAVLY---KQNDLRLE-QRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDP 61

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTA------------------------- 124
           +++G + SG V  VG +V+ L  G  V  A+ P                           
Sbjct: 62  MVIGHEASGTVVKVGKNVKHLKKGDRV--AVEPGVPCRRCQFCKEGKYNLCPDLTFCATP 119

Query: 125 -VRGTYADYAVLSEDELTPKPVSVTHADASAI-PFAALTAWRALKCAARMSEGQRLLVLG 182
              G  A Y V + D     P +V+  + + + P +      A +  A +  G  +LV+ 
Sbjct: 120 PDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLS--VGVHACR-RAGVQLGTTVLVI- 175

Query: 183 GGGAVGFAAVQFSVASGCHVSAT-CGSKSIDRVLAAGA---------EQAVDYSSKDIEL 232
           G G +G  +V  + A G  V  T    + ++     GA         ++      + I  
Sbjct: 176 GAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRS 235

Query: 233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
           AI    +  +D  G  +   +G+N  + GG  M
Sbjct: 236 AIGDLPNVTIDCSGNEKCITIGINITRTGGTLM 268

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score = 81.5 bits (202), Expect = 9e-18
 Identities = 58/273 (21%), Positives = 102/273 (37%), Gaps = 48/273 (17%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
            ++V+    GP  L +  N  +P+  PNEVL+R  +V I   D           F    P
Sbjct: 9   LSLVVH---GPGDLRLE-NYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKP 64

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTA------------------------- 124
           ++LG + SG V  VG+SV+ L  G  V  A+ P A                         
Sbjct: 65  MVLGHEASGTVEKVGSSVKHLKPGDRV--AIEPGAPRENDEFCKMGRYNLSPSIFFCATP 122

Query: 125 -VRGTYADYAVLSEDELTPKPVSVTHADASAI-PFA-ALTAWRALKCAARMSEGQRLLVL 181
              G    +   +       P +VT  + + I P +  + A R       ++ G ++LV 
Sbjct: 123 PDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACR----RGGVTLGHKVLVC 178

Query: 182 GGGGAVGFAAVQFSVASGCH--VSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK---- 235
            G G +G   +  + A G    V     +  + +    GA+  +  S +  +   +    
Sbjct: 179 -GAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEG 237

Query: 236 ---GKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
               K +  ++  GA  + + G+   + GG  +
Sbjct: 238 QLGCKPEVTIECTGAEASIQAGIYATRSGGTLV 270

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score = 79.3 bits (196), Expect = 5e-17
 Identities = 46/276 (16%), Positives = 74/276 (26%), Gaps = 47/276 (17%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A+ + R  G +   V      P+ +  E LVRT  V +   D  + +G      E    
Sbjct: 2   KAIAVKR--GEDRPVVI-EKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDH 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEV----------------------------FGALH 121
           L+LG +  G V         L  G  V                            +    
Sbjct: 59  LVLGHEAVGVVVDPN--DTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERG 116

Query: 122 PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFA-ALTAWR--ALKCAARMSEGQRL 178
                G  +++    E  L   P S         P +    A        +A   +    
Sbjct: 117 IVGAHGYMSEFFTSPEKYLVRIPRSQAELGFLIEPISITEKALEHAYASRSAFDWDPSSA 176

Query: 179 LVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRV-------LAAGAEQAVDYSSKDIE 231
            VLG G ++G   +                   DR            A   VD     +E
Sbjct: 177 FVLGNG-SLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDAT-YVDSRQTPVE 234

Query: 232 --LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
               +  + D + +  G P+     +  L   G   
Sbjct: 235 DVPDVYEQMDFIYEATGFPKHAIQSVQALAPNGVGA 270

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score = 74.0 bits (182), Expect = 3e-15
 Identities = 42/280 (15%), Positives = 79/280 (28%), Gaps = 50/280 (17%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG--YGRSIFEPL 87
           +A+++        ++     ++      ++ +RT    I   D  + +G     ++ +  
Sbjct: 2   KAIIVKPPNAGVQVKDVDEKKLD--SYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGK 59

Query: 88  LPLILGRDISGEVAAVGASVRSLTVGQEV--------------------------FGALH 121
             L+LG +  G V            G  V                          FG   
Sbjct: 60  DFLVLGHEAIGVVEESYHGFS---QGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAG 116

Query: 122 PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFA-ALTAWRALKCAARMS------- 173
              + G   ++       L   P S+      A P A    +   +    +         
Sbjct: 117 IHKMDGFMREWWYDDPKYLVKIPKSIEDIGILAQPLADIEKSIEEILEVQKRVPVWTCDD 176

Query: 174 ---EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK-- 228
                +++LV+G G  +G          G  V      +  +       E   +Y +   
Sbjct: 177 GTLNCRKVLVVGTG-PIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSN 235

Query: 229 --DIELAIKGKFDAVLDTIGAP-ETERLGLNFLKRGGHYM 265
             D      GKFD ++D  GA        +  L R G   
Sbjct: 236 GYDKLKDSVGKFDVIIDATGADVNILGNVIPLLGRNGVLG 275

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score = 72.6 bits (179), Expect = 1e-14
 Identities = 61/299 (20%), Positives = 101/299 (33%), Gaps = 87/299 (29%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
             A V P  G    L+    +++   + +EVLV+  A  +   D  +R         PL 
Sbjct: 7   IIAAVTPCKGADFELQ---ALKIRQPQGDEVLVKVVATGMCHTDLIVRDQ---KYPVPL- 59

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEV-----------------------FGALHPTAV 125
           P +LG + SG + A+G +V  L VG  V                       F   + +  
Sbjct: 60  PAVLGHEGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGA 119

Query: 126 R----------------------GTYADYAVLSEDELTPKPVSVTHADASAIPFAAL--- 160
                                   ++A YA+  E        +         P   L   
Sbjct: 120 DSEGNHALCTHDQGVVNDHFFAQSSFATYALSRE-------NNTVKVTKDV-PIELLGPL 171

Query: 161 -----TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSIDRV 214
                T   A   A +++     +  G G  VG +A+  +   G   + A      +D V
Sbjct: 172 GCGIQTGAGACINALKVTPASSFVTWGAGA-VGLSALLAAKVCGASIIIA------VDIV 224

Query: 215 -----LAA--GAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGG 262
                LA   GA   ++  ++D   AIK    G  +  L++ G+PE  + G++ L   G
Sbjct: 225 ESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILG 283

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 70.8 bits (174), Expect = 4e-14
 Identities = 70/278 (25%), Positives = 113/278 (40%), Gaps = 34/278 (12%)

Query: 27  TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEP 86
           ++ +A V+ +        V+  + + DL   +VLVR    S+N  D       G+ +   
Sbjct: 2   SAFQAFVVNKTETEFTAGVQ-TISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKT- 59

Query: 87  LLPLILGRDISGEVAAVGASVRSLTVGQEVF------GALHPTAVRGTYADYAVLSEDEL 140
             P + G D++G V +  +       G EV       G  H     G Y++YA L  + L
Sbjct: 60  -YPFVPGIDLAGVVVS--SQHPRFREGDEVIATGYEIGVTHF----GGYSEYARLHGEWL 112

Query: 141 TPKPVSVTHADASAIPFAALTAW---RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVA 197
            P P  +T  +A AI  A  TA      L+      E   +LV G  G VG  AV     
Sbjct: 113 VPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAK 172

Query: 198 SGCHVSATCGSKS-IDRVLAAGAEQAVD---YSSKDIELAIKGKFDAVLDTIGAPETERL 253
            G  V A+ G  +  D +   GA++ +      ++ I    K ++ A +D +G      +
Sbjct: 173 RGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATV 232

Query: 254 GLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVL 291
            L+ ++ GG          A++   GL  G  + TTV 
Sbjct: 233 -LSRMRYGG--------AVAVS---GLTGGAEVPTTVH 258

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 70.4 bits (173), Expect = 6e-14
 Identities = 65/280 (23%), Positives = 110/280 (39%), Gaps = 34/280 (12%)

Query: 25  VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
           ++T  +A+   +      + V+  +   DL  + VL++     IN  D       G  + 
Sbjct: 1   MSTLFQALQAEKNADDVSVHVK-TISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVR 59

Query: 85  EPLLPLILGRDISGEVAAVGASVRSLTVGQEVF------GALHPTAVRGTYADYAVLSED 138
           E   PLILG D +G V +  ++      G EV       G        G  ++YA +  D
Sbjct: 60  E--YPLILGIDAAGTVVS--SNDPRFAEGDEVIATSYELGVSRD----GGLSEYASVPGD 111

Query: 139 ELTPKPVSVTHADASAIPFAALTA---WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFS 195
            L P P +++  +A     A  TA      L+      E   +LV G  G VG  AV   
Sbjct: 112 WLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSML 171

Query: 196 VASGCHVSATCGSKS-IDRVLAAGAEQAVD---YSSKDIELAIKGKFDAVLDTIGAPETE 251
              G  V A+ G++   D +   GA + +         ++   K ++   +D +G  +  
Sbjct: 172 NKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGGKQLA 231

Query: 252 RLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVL 291
            L L+ ++ GG        + A++   GL  G  +  TV 
Sbjct: 232 SL-LSKIQYGG--------SVAVS---GLTGGGEVPATVY 259

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 70.0 bits (172), Expect = 6e-14
 Identities = 70/275 (25%), Positives = 107/275 (38%), Gaps = 36/275 (13%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A++L +  G  +  V+ ++E   L   +V V     S+N  D    +G G+ I     P
Sbjct: 2   QALILEQQDGKTLASVQ-HLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRH--FP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVF------GALHPTAVRGTYADYAVLSEDELTPK 143
           +I G D +G V A  +       GQEV       G  H     G  A+ A +  D L   
Sbjct: 59  MIPGIDFAGTVHA--SEDPRFHAGQEVLLTGWGVGENHW----GGLAERARVKGDWLVAL 112

Query: 144 PVSVTHADASAIPFAALTAWRALKCAARMSEGQ-----RLLVLGGGGAVGFAAVQFSVAS 198
           P  ++  +A  I  A  TA   L   A    G       ++V G  G VG  AV      
Sbjct: 113 PAGLSSRNAMIIGTAGFTA--MLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKL 170

Query: 199 GCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAI-KGKFDAVLDTIGAPETERLGLN 256
           G  V+A  G +S    + + GA + +          + K  +   +DT+G     ++ L 
Sbjct: 171 GYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGDKVLAKV-LA 229

Query: 257 FLKRGGHYMTLHGETAALADHYGLALGLPIATTVL 291
            +  GG          A     GLA G  + TTV+
Sbjct: 230 QMNYGG--------CVAAC---GLAGGFALPTTVM 253

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198

 Score = 66.1 bits (162), Expect = 3e-13
 Identities = 24/69 (34%), Positives = 36/69 (52%)

Query: 140 LTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASG 199
           + P P ++   +A+    A LTAW +L    R+S G+R+L+    G VG AAV  +   G
Sbjct: 4   VVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIG 63

Query: 200 CHVSATCGS 208
             +  T GS
Sbjct: 64  ARIYTTAGS 72

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 67.2 bits (165), Expect = 7e-13
 Identities = 49/223 (21%), Positives = 81/223 (36%), Gaps = 42/223 (18%)

Query: 75  MRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEV------------------ 116
            ++  G S +    P++ G ++ GEV  VG+ V   TVG  V                  
Sbjct: 54  TKNDLGMSNY----PMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERD 109

Query: 117 -----------FGALHPTAVR--GTYADYAVLSEDELTPKPVSVTHADASAIPF--AALT 161
                      +  ++       G +A   V+ +  +   P  +    A+  P   A +T
Sbjct: 110 LEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAA--PLLCAGVT 167

Query: 162 AWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA--TCGSKSIDRVLAAGA 219
            +  L        G R  +LG GG VG   V+ + A G HV+   +   K  + +   GA
Sbjct: 168 VYSPLSHFGLKQPGLRGGILGLGG-VGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGA 226

Query: 220 EQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGG 262
           +  V  S +     +    D V+DT+         L+ LK  G
Sbjct: 227 DDYVIGSDQAKMSELADSLDYVIDTVPVHHALEPYLSLLKLDG 269

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score = 66.9 bits (164), Expect = 1e-12
 Identities = 53/224 (23%), Positives = 85/224 (37%), Gaps = 44/224 (19%)

Query: 75  MRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEV------------------ 116
           +RS +  +++    P + G +I G V AVG  V     G  V                  
Sbjct: 67  VRSEWAGTVY----PCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDG 122

Query: 117 -----------FGALHP---TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPF--AAL 160
                      + +  P       G Y+   V+ E  +           A A P   A +
Sbjct: 123 LENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVA-PLLCAGI 181

Query: 161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA--TCGSKSIDRVLAAG 218
           T +  L+   +   G+++ V+G GG +G   ++ + A G HV A  T  +K      A G
Sbjct: 182 TTYSPLR-HWQAGPGKKVGVVGIGG-LGHMGIKLAHAMGAHVVAFTTSEAKREA-AKALG 238

Query: 219 AEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGG 262
           A++ V+  + D   A    FD +L+T+ AP         LKR G
Sbjct: 239 ADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDG 282

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score = 66.5 bits (163), Expect = 1e-12
 Identities = 46/268 (17%), Positives = 83/268 (30%), Gaps = 51/268 (19%)

Query: 39  GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISG 98
                 +    +  +LK  EV V  R+  I   D                  +LG + +G
Sbjct: 23  SEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAG 82

Query: 99  EVAAVGASVRSLTVGQEV--------------------------FGALHPTAVRGTYADY 132
           EV AV  SV+S+ VG  V                          F +  P  V G    Y
Sbjct: 83  EVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPP--VPGLLRRY 140

Query: 133 AVLSEDELTPKPVSVTHADASAI-PFA-ALTAWRALKCAARMSEGQRLLVLGGGGAVGFA 190
                        ++++ + + + P + AL   +     A +  G  +L+  G G +G  
Sbjct: 141 VNHPAVWCHKIG-NMSYENGAMLEPLSVALAGLQ----RAGVRLGDPVLIC-GAGPIGLI 194

Query: 191 AVQFSVASGC-HVSAT------------CGSKSIDRVLAAGAEQAVDYSSKDIELAIKGK 237
            +  + A+G   +  T               + +          A + + K +E     +
Sbjct: 195 TMLCAKAAGACPLVITDIDEGRLKFAKEICPEVV--THKVERLSAEESAKKIVESFGGIE 252

Query: 238 FDAVLDTIGAPETERLGLNFLKRGGHYM 265
               L+  G   +    +  +K GG   
Sbjct: 253 PAVALECTGVESSIAAAIWAVKFGGKVF 280

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score = 66.1 bits (162), Expect = 2e-12
 Identities = 51/223 (22%), Positives = 94/223 (42%), Gaps = 42/223 (18%)

Query: 75  MRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEV------------------ 116
           +++ +G S++    PL+ G +I GEV  VG+ V+ + VG +V                  
Sbjct: 61  IKNDWGFSMY----PLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCAND 116

Query: 117 -----------FGALHP--TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPF--AALT 161
                      + +++   T   G Y+++ V +E  +   P ++     +  P   A +T
Sbjct: 117 LENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGA--PLLCAGIT 174

Query: 162 AWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA--TCGSKSIDRVLAAGA 219
            +  LK       G+ + ++G GG +G  AV+F+ A G  V+   T  SK  + +   GA
Sbjct: 175 VYSPLKYFGLDEPGKHIGIVGLGG-LGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGA 233

Query: 220 EQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGG 262
           +  +    ++   A  G  D ++DT+ A          LK  G
Sbjct: 234 DSFLVSRDQEQMQAAAGTLDGIIDTVSAVHPLLPLFGLLKSHG 276

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score = 64.3 bits (157), Expect = 9e-12
 Identities = 48/278 (17%), Positives = 87/278 (31%), Gaps = 56/278 (20%)

Query: 36  RFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRM----RSGYGRSIFEPLLPL 90
           +      + V   V  P + KP E++++ +A  I   D  M      GY         P+
Sbjct: 35  KVWRYPEVRVE-EVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPV 93

Query: 91  ILGRDISGEVAAVGASV------RSLTVGQEVFGALHP---------------------- 122
            LG + SG V   G         +   +G+ V                            
Sbjct: 94  TLGHEFSGVVVEAGPEAINRRTNKRFEIGEPV--CAEEMLWCGHCRPCAEGFPNHCENLN 151

Query: 123 ---TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPF--AALT-----AWRALKCA-AR 171
                V G +A+Y  +               +     F   +L      A+ A+      
Sbjct: 152 ELGFNVDGAFAEYVKVDAKYAWSLRELEGVYEGD-RLFLAGSLVEPTSVAYNAVIVRGGG 210

Query: 172 MSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDRVLAAGAEQAVDYSSKD 229
           +  G  +++L GGG +G AAV     +G   V  +  S+   +     GA+  +D + ++
Sbjct: 211 IRPGDNVVIL-GGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKEN 269

Query: 230 IELAIKGK-----FDAVLDTIGAPETERLGLNFLKRGG 262
              A+            L+  G P+     +  +    
Sbjct: 270 FVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRA 307

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333

 Score = 63.3 bits (155), Expect = 1e-11
 Identities = 47/200 (23%), Positives = 70/200 (35%), Gaps = 35/200 (17%)

Query: 49  VEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108
           VE+P LK  EVL+    +S++P    MR             L  G  + G+   V   V 
Sbjct: 31  VELPPLKNGEVLLEALFLSVDPY---MR---IA-----SKRLKEGAVMMGQ--QVARVVE 77

Query: 109 S----LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSV-THADASA------IPF 157
           S       G  V         +  +  + +     L             S       +P 
Sbjct: 78  SKNSAFPAGSIVLA-------QSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMP- 129

Query: 158 AALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLA 216
             LTA+  L     +  G+ +LV    GAVG    Q +   GC V    GS   I  +  
Sbjct: 130 -GLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ 188

Query: 217 AGAEQAVDY-SSKDIELAIK 235
            G + A +Y +   +E A+K
Sbjct: 189 IGFDAAFNYKTVNSLEEALK 208

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357

 Score = 61.5 bits (150), Expect = 6e-11
 Identities = 50/233 (21%), Positives = 84/233 (36%), Gaps = 37/233 (15%)

Query: 26  TTSCRAVVL---PRFGG---PEVLEVRPNVEVPD-LKPNEVLVRTRAVSINP-LDTRMRS 77
               + VVL   P   G    E   +   V +PD +   +V VRT  +S++P +  RM  
Sbjct: 6   AMIVQRVVLNSRPGKNGNPVAENFRME-EVYLPDNINEGQVQVRTLYLSVDPYMRCRMNE 64

Query: 78  GYGRSIFEPLLPLILGRDISGEVAAVGASVRS----LTVGQEVFGALHPTAVRGTYADYA 133
             G        P  L + + G    +G    S    LT G  V     P      +    
Sbjct: 65  DTGTDYIT---PWQLSQVVDGG--GIGIIEESKHTNLTKGDFVTSFYWP------WQTKV 113

Query: 134 VLSEDELTPKPVSVTHADASA------IPFAALTAWRALKCAARMSEGQR--LLVLGGGG 185
           +L  + L      +     S       +P   LT+   ++    ++ G    ++V G  G
Sbjct: 114 ILDGNSLEKVDPQLVDGHLSYFLGAIGMP--GLTSLIGIQEKGHITAGSNKTMVVSGAAG 171

Query: 186 AVGFAAVQFSVASGC-HVSATCGSKS-IDRVLA-AGAEQAVDYSSKDIELAIK 235
           A G  A Q     GC  V   CG+      + +  G + A++Y   ++   ++
Sbjct: 172 ACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLR 224

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345

 Score = 59.5 bits (145), Expect = 3e-10
 Identities = 47/235 (20%), Positives = 82/235 (34%), Gaps = 42/235 (17%)

Query: 26  TTSCRAVVLPRF--GGPE----VLEVRPNVEVPDLKPNEVLVRTRAVSINP-LDTRMR-- 76
           T + + V+L  +  G P                    N VLV+   +S +P +  RM   
Sbjct: 2   TATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMGKP 61

Query: 77  SGYGRSIFEPLLPLILGRDISGEV---AAVGASVRS----LTVGQEVFGALHPTAVRGTY 129
                ++ +   P        G+      V   + S       G  ++G          +
Sbjct: 62  DPSTAALAQAYTP--------GQPIQGYGVSRIIESGHPDYKKGDLLWG-------IVAW 106

Query: 130 ADYAVLSEDELTPKPVSVTHADASA------IPFAALTAWRALKCAARMSEGQRLLVLGG 183
            +Y+V++        +  T    S       +P   +TA+          EG+ + V   
Sbjct: 107 EEYSVITPMTHAHFKIQHTDVPLSYYTGLLGMP--GMTAYAGFYEVCSPKEGETVYVSAA 164

Query: 184 GGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLA-AGAEQAVDY-SSKDIELAIK 235
            GAVG    Q +   GC+V  + GSK  +D +    G + A +Y    D+  A+K
Sbjct: 165 SGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALK 219

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 58.4 bits (142), Expect = 6e-10
 Identities = 46/225 (20%), Positives = 82/225 (36%), Gaps = 51/225 (22%)

Query: 75  MRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEV------------------ 116
             S +   I+    P+I G +I+G +  VG  V+   +G  V                  
Sbjct: 49  AYSEWKEGIY----PMIPGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEH 104

Query: 117 -----------FGALHP----TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPF--AA 159
                      +  L          G Y++  V+ E+ +     +      +  P   A 
Sbjct: 105 QEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVA--PLLCAG 162

Query: 160 LTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA--TCGSKSIDRVLAA 217
           +T +  LK  +++++G ++ V G GG +G  AV+++VA G  VS       K  D  L+ 
Sbjct: 163 ITTYSPLK-FSKVTKGTKVGVAGFGG-LGSMAVKYAVAMGAEVSVFARNEHKKQD-ALSM 219

Query: 218 GAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGG 262
           G +     +        K + D ++ TI      +  L  L   G
Sbjct: 220 GVKHFY--TDPK---QCKEELDFIISTIPTHYDLKDYLKLLTYNG 259

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score = 57.6 bits (140), Expect = 1e-09
 Identities = 49/222 (22%), Positives = 77/222 (34%), Gaps = 65/222 (29%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           C+A V      P  LE    + V   K +EV ++  A  I   D+ +      S F    
Sbjct: 10  CKAAVAWEPHKPLSLE---TITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKF---- 62

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVF---------------------GALHPTAVRG 127
           P+ILG +  G V ++GA V  +  G +V                            A  G
Sbjct: 63  PVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTG 122

Query: 128 -----------------------TYADYAVLSEDELTPKPVSVTHADASAIPFAAL---- 160
                                  T+ +Y V+++       ++V   D  A   + L    
Sbjct: 123 LMADMTSRFTCRGKPIYNLMGTSTFTEYTVVAD-------IAVAKIDPKAPLESCLIGCG 175

Query: 161 --TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC 200
             T + A    A+++ G    V G GG VGF+A+    A+G 
Sbjct: 176 FATGYGAAVNTAKVTPGSTCAVFGLGG-VGFSAIVGCKAAGA 216

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score = 56.0 bits (136), Expect = 4e-09
 Identities = 45/216 (20%), Positives = 71/216 (32%), Gaps = 51/216 (23%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           C+A V    G P  +E    +EV   K +EV ++  A ++   D    SG   +  E   
Sbjct: 7   CKAAVAWEAGKPLSIE---EIEVAPPKAHEVRIKIIATAVCHTDAYTLSG---ADPEGCF 60

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHP----------------TAVR------ 126
           P+ILG   +G V +VG  V  L  G  V     P                  +R      
Sbjct: 61  PVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120

Query: 127 ----------------------GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164
                                  T+++Y V+++  +              +     T + 
Sbjct: 121 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYG 180

Query: 165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC 200
           A    A++  G    V G GG VG A +     +G 
Sbjct: 181 AAVNTAKLEPGSVCAVFGLGG-VGLAVIMGCKVAGA 215

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score = 56.1 bits (136), Expect = 4e-09
 Identities = 41/220 (18%), Positives = 72/220 (32%), Gaps = 56/220 (25%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           C+A +  + G P  +E    +EV   K  EV ++  A  + P D            + L 
Sbjct: 9   CKAAIAWKTGSPLCIE---EIEVSPPKACEVRIQVIATCVCPTDINATDPK----KKALF 61

Query: 89  PLILGRDISGEVAAVGASVRSLTVG-------------------------QEVFGALHPT 123
           P++LG + +G V +VG  V +   G                          ++    +PT
Sbjct: 62  PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPT 121

Query: 124 AVRG-----------------------TYADYAVLSEDELTPKPVSVTHADASAIPFAAL 160
             +                        +++ Y V+SE  L              I     
Sbjct: 122 IDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFS 181

Query: 161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC 200
           + + A    A+++ G    V G G  VG +A+     +G 
Sbjct: 182 SGYGAAINTAKVTPGSTCAVFGLGC-VGLSAIIGCKIAGA 220

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 54.5 bits (132), Expect = 1e-08
 Identities = 44/227 (19%), Positives = 73/227 (32%), Gaps = 48/227 (21%)

Query: 75  MRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS-LTVGQEV----------------- 116
               +G        PL++G +I G+V  +G    S L VGQ V                 
Sbjct: 53  AAGHWGNMKM----PLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKN 108

Query: 117 ------------FGALHP--TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPF--AAL 160
                       +   +      +G YA+Y  + E  + P P ++    A+  P     L
Sbjct: 109 DNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAA--PLLCGGL 166

Query: 161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA--TCGSKSIDRVLAAG 218
           T +  L        G+++ ++G GG +G      S A G           K  D  +  G
Sbjct: 167 TVYSPLV-RNGCGPGKKVGIVGLGG-IGSMGTLISKAMGAETYVISRSSRKRED-AMKMG 223

Query: 219 AEQAVDYS-SKDIELAIKGKFDAVLDTIGAPETERLG--LNFLKRGG 262
           A+  +      D        FD ++    +            +K GG
Sbjct: 224 ADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGG 270

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 54.1 bits (129), Expect = 3e-08
 Identities = 51/347 (14%), Positives = 83/347 (23%), Gaps = 149/347 (42%)

Query: 3   ILKARKSANDYLVSPLRFVR-------F------LVTTSCRAVV---------------- 33
           +LK++   N  LV  L  V+       F      L+TT  + V                 
Sbjct: 237 LLKSKPYENCLLV--LLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHH 294

Query: 34  LPRFGGPEVLEVRP---NVEVPDLKPNEVLVRTRAVSINPL----------DTRMRSGYG 80
                  EV  +     +    DL P E       ++ NP           D        
Sbjct: 295 SMTLTPDEVKSLLLKYLDCRPQDL-PRE------VLTTNPRRLSIIAESIRDGLATWDNW 347

Query: 81  RSI-FEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDE 139
           + +  + L  +I             +S+  L           P   R  +   +V     
Sbjct: 348 KHVNCDKLTTII------------ESSLNVLE----------PAEYRKMFDRLSVFPPSA 385

Query: 140 LTPKPVSVTHADASAIPFAALTA-WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS 198
                          IP   L+  W  +                        +    V +
Sbjct: 386 H--------------IPTILLSLIWFDVI----------------------KSDVMVVVN 409

Query: 199 GCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFL 258
             H        S    L     +    S   I L +K K +                   
Sbjct: 410 KLH------KYS----LVEKQPKESTISIPSIYLELKVKLE------------------- 440

Query: 259 KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIG 305
               +   LH    ++ DHY +         +      Q +YS+ IG
Sbjct: 441 ----NEYALH---RSIVDHYNIPKTFDSDDLIPPYLD-QYFYSH-IG 478

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score = 51.9 bits (125), Expect = 8e-08
 Identities = 39/216 (18%), Positives = 66/216 (30%), Gaps = 51/216 (23%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           C+A V      P V+E    +EV     NE+ ++  A  +   D            +   
Sbjct: 9   CKAAVAWEANKPLVIE---EIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKH---KDGF 62

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVF---------------------GALHPTAVRG 127
           P++LG + +G V +VG  V     G++V                                
Sbjct: 63  PVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPD 122

Query: 128 -----------------------TYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164
                                  T++ Y V+++  +     S        +     T + 
Sbjct: 123 VMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFG 182

Query: 165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC 200
           A    A++  G    V G G  VG AAV    ++G 
Sbjct: 183 AAVNTAKVEPGSTCAVFGLGA-VGLAAVMGCHSAGA 217

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score = 49.5 bits (119), Expect = 5e-07
 Identities = 52/289 (17%), Positives = 77/289 (26%), Gaps = 84/289 (29%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSI--------NPLDTRMRSGYGR 81
           +            +      E P   P + +VR  AV+                R     
Sbjct: 2   KGFA---MLSIGKVGWI-EKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNM-- 55

Query: 82  SIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEV------------------------- 116
                    ILG +  GEV  VG+ V+    G  V                         
Sbjct: 56  ---------ILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGM 106

Query: 117 FGALHPT---------AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK 167
                 +               AD        L   P  +    A  IP    T +   +
Sbjct: 107 LAGWKFSNVKDGVFGEFFHVNDADMN------LAHLPKEIPLEAAVMIPDMMTTGFHGAE 160

Query: 168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSIDRV-------LAAGA 219
             A +  G  + V+ G G VG  +V  +   G   + A      +          L  GA
Sbjct: 161 -LANIKLGDTVCVI-GIGPVGLMSVAGANHLGAGRIFA------VGSRKHCCDIALEYGA 212

Query: 220 EQAVDYSSKDIELAIK----GK-FDAVLDTIGAPETERLGLNFLKRGGH 263
              ++Y + DI   I     GK  D V+   G   T    +  +K G  
Sbjct: 213 TDIINYKNGDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSD 261

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 61/301 (20%), Positives = 103/301 (34%), Gaps = 90/301 (29%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           C+A VL     P  +E    VEV   K +EV ++  A  I   D  + SG   +      
Sbjct: 9   CKAAVLWEEKKPFSIE---EVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPL---- 61

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVF---------------------GALHPTAVRG 127
           P+I G + +G V ++G  V ++  G +V                           +  RG
Sbjct: 62  PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121

Query: 128 -----------------------TYADYAVLSEDELTPKPVSVTHADASAIPF--AAL-- 160
                                  T++ Y V+ E       +SV   DA++ P     L  
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDE-------ISVAKIDAAS-PLEKVCLIG 173

Query: 161 ----TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI----- 211
               T + +    A++++G    V G GG VG + +    A+G        ++ I     
Sbjct: 174 CGFSTGYGSAVKVAKVTQGSTCAVFGLGG-VGLSVIMGCKAAGA-------ARIIGVDIN 225

Query: 212 ----DRVLAAGAEQAVD--YSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG 261
                +    GA + V+     K I+  +     G  D   + IG  +T    L+  +  
Sbjct: 226 KDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEA 285

Query: 262 G 262
            
Sbjct: 286 Y 286

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 41.8 bits (98), Expect = 2e-04
 Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 13/92 (14%)

Query: 172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA----------TCGSKSIDRVLAAGAE- 220
           M    R+L++G  G +G    + S+  G               +  ++ ++   A+GA  
Sbjct: 1   MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANI 60

Query: 221 QAVDYSSKD-IELAIKGKFDAVLDTIGAPETE 251
                     +  A+K   D V+ T+G+ + E
Sbjct: 61  VHGSIDDHASLVEAVKN-VDVVISTVGSLQIE 91

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 41.5 bits (97), Expect = 2e-04
 Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 12/91 (13%)

Query: 172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHV---------SATCGSKSIDRVLAAGAE-Q 221
           M +  R+L++GG G +G   V  S++ G            S     + +      GA+  
Sbjct: 1   MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLI 60

Query: 222 AVDYSSKD-IELAIKGKFDAVLDTIGAPETE 251
                    +  A+K   D V+  +      
Sbjct: 61  EASLDDHQRLVDALKQ-VDVVISALAGGVLS 90

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 39.5 bits (92), Expect = 9e-04
 Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 8/83 (9%)

Query: 176 QRLLVLGGGGAVGFAAVQFSVASGCHVSA-----TCGSKSIDRVLAAGAEQ-AVDYSSKD 229
            ++L+ GG G +G   V+ S+  G          +  +  +D   + GA     +    +
Sbjct: 12  SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHE 71

Query: 230 -IELAIKGKFDAVLDTIGAPETE 251
            +   +K   D V+  +  P+  
Sbjct: 72  KLVELMKK-VDVVISALAFPQIL 93

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	307
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.95
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.78
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.64
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	98.5
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.46
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	98.35
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	98.34
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	98.3
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	98.27
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.26
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.26
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.26
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	98.25
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	98.22
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	98.21
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.2
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	98.18
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	98.16
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	98.1
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	98.08
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	98.08
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	98.08
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	98.02
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	98.02
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.02
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.01
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	98.01
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	98.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	98.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.99
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.99
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.97
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.96
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.96
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.95
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.95
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	97.94
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.93
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.93
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	97.92
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	97.92
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.92
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.92
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.91
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.91
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.91
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.91
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.9
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.9
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.9
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	97.89
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	97.88
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.88
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	97.87
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.87
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.87
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.86
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.86
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.86
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.86
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.86
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.85
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	97.85
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.85
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	97.84
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.84
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.83
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	97.83
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.83
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.82
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	97.82
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.82
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.82
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.82
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	97.82
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.81
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.81
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	97.81
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	97.81
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	97.81
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.81
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.8
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.79
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.79
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	97.79
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	97.79
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.79
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	97.78
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.78
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	97.78
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.78
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.78
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	97.78
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	97.78
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.77
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.77
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	97.77
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	97.77
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	97.77
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.76
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.76
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	97.76
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	97.76
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	97.76
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	97.76
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.76
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.75
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.75
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.75
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.75
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	97.75
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.74
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.74
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.74
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.74
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.73
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	97.73
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	97.73
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.73
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.73
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.72
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	97.72
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	97.72
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.71
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	97.7
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.7
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.7
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.7
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	97.7
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	97.69
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	97.69
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	97.69
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	97.68
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	97.68
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	97.68
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.68
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	97.68
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	97.66
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	97.66
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.66
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.66
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	97.66
1xhl_A	297	Short-chain dehydrogenase/reductase family member	97.66
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.65
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	97.65
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	97.64
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.64
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	97.63
1spx_A	278	Short-chain reductase family member (5L265); paral	97.63
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	97.63
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	97.63
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.63
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	97.62
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	97.62
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	97.62
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.61
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	97.61
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	97.61
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	97.6
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.6
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	97.59
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	97.59
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.58
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	97.58
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	97.58
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	97.58
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	97.58
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	97.57
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.57
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	97.57
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.56
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	97.56
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	97.56
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	97.56
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.55
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.55
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.55
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.53
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	97.53
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.52
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	97.52
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	97.52
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	97.52
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.51
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.51
1xq1_A	266	Putative tropinone reducatse; structural genomics,	97.5
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	97.5
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	97.49
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	97.49
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	97.49
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	97.48
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	97.48
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.47
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	97.46
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	97.46
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	97.45
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.45
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	97.44
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	97.44
1xkq_A	280	Short-chain reductase family member (5D234); parra	97.44
4e4y_A	244	Short chain dehydrogenase family protein; structur	97.43
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.43
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.41
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.4
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	97.37
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	97.37
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	97.35
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	97.34
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	97.33
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.33
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	97.32
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.32
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	97.28
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	97.28
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	97.27
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.26
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.25
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.24
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	97.23
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	97.22
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	97.22
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.22
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	97.21
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.2
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	97.19
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	97.19
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.15
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	97.14
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.11
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	97.11
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	97.11
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	97.09
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.09
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.07
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	97.05
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	97.04
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.02
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	97.01
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	97.0
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	96.97
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	96.95
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.91
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	96.9
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	96.89
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	96.79
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	96.73
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	96.71
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.69
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	96.66
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	96.65
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	96.65
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.61
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	96.61
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.6
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	96.59
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.59
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.59
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.58
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.58
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	96.55
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.51
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	96.49
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.49
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.47
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.46
1xq6_A	253	Unknown protein; structural genomics, protein stru	96.44
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	96.41
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.41
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.41
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	96.39
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.37
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	96.37
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	96.36
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	96.35
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.35
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	96.35
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	96.35
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	96.32
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.29
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	96.29
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	96.26
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	96.24
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	96.23
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	96.22
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	96.21
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	96.21
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	96.21
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.2
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	96.18
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.14
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.12
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.11
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.1
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	96.1
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	96.07
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	96.06
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	96.06
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	96.06
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	96.01
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.01
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	95.98
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	95.98
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	95.97
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	95.94
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	95.94
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	95.9
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	95.89
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.88
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	95.88
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.88
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	95.86
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	95.86
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	95.84
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	95.81
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	95.8
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	95.78
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	95.76
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	95.75
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	95.75
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	95.7
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	95.69
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	95.69
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	95.67
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	95.65
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	95.64
4f6c_A	427	AUSA reductase domain protein; thioester reductase	95.64
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	95.64
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	95.59
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	95.59
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	95.59
2b25_A	336	Hypothetical protein; structural genomics, methyl	95.56
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	95.55
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	95.55
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	95.51
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	95.5
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	95.5
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	95.5
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	95.49
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	95.47
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	95.45
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	95.45
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	95.44
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	95.41
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	95.36
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	95.36
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	95.36
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	95.36
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	95.34
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	95.34
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	95.33
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.33
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	95.29
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	95.28
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	95.25
1id1_A	153	Putative potassium channel protein; RCK domain, E.	95.21
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	95.2
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	95.18
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	95.17
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	95.17
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.16
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	95.16
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	95.15
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	95.15
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	95.14
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	95.12
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.05
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	95.05
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	95.04
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	95.04
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	95.04
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	95.03
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	95.0
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	95.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	94.99
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	94.98
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	94.96
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	94.96
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	94.95
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	94.91
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	94.9
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	94.88
3a06_A	376	1-deoxy-D-xylulose 5-phosphate reductoisomerase; M	94.87
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	94.85
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	94.84
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	94.84
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	94.82
3r3h_A	242	O-methyltransferase, SAM-dependent; structural gen	94.81
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	94.8
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	94.79
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	94.77
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	94.73
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	94.72
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	94.72
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	94.68
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	94.66
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	94.65
3f4k_A	257	Putative methyltransferase; structural genomics, P	94.64
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	94.63
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	94.61
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	94.61
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	94.59
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	94.59
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	94.59
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	94.59
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	94.58
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	94.58
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	94.57
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	94.56
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	94.55
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	94.53
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	94.52
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	94.5
3e8s_A	227	Putative SAM dependent methyltransferase; NP_74470	94.48
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	94.47
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	94.45
3ntv_A	232	MW1564 protein; rossmann fold, putative methyltran	94.45
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	94.42
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	94.42
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	94.41
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	94.39
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	94.37
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	94.33
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	94.32
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	94.3
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	94.29
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	94.28
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	94.26
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	94.24
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	94.2
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	94.18

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=4e-46  Score=335.75  Aligned_cols=243  Identities=30%  Similarity=0.487  Sum_probs=218.5

Q ss_pred             ccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCC--CccccCCCCCcccccceEEEEEEe
Q 021831           26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGY--GRSIFEPLLPLILGRDISGEVAAV  103 (307)
Q Consensus        26 ~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~--~~~~~~~~~p~~~G~e~~G~V~~~  103 (307)
                      |++||++++++++.++.++++ +.+.|+|++|||+|||.++|||++|++++.|.  ........+|.++|||++|+|+++
T Consensus         4 m~~Mka~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~v   82 (321)
T 3tqh_A            4 MKEMKAIQFDQFGPPKVLKLV-DTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIEL   82 (321)
T ss_dssp             -CEEEEEEESSSCSGGGEEEE-EEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEE
T ss_pred             cccceEEEEccCCCcceeEEE-ecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEe
Confidence            468999999999988899999 99999999999999999999999999999882  111124568999999999999999


Q ss_pred             cCCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcC
Q 021831          104 GASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGG  183 (307)
Q Consensus       104 G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga  183 (307)
                      |+++++|++||||++.......+|+|+||++++.+.++++|+++++++++.++++++|||+++ +.+++++|++|||+||
T Consensus        83 G~~v~~~~~GdrV~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga  161 (321)
T 3tqh_A           83 GSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAG  161 (321)
T ss_dssp             CTTCCSCCTTCEEEEECSTTTCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCEEEESST
T ss_pred             CCCCCCCCCCCEEEEccCCCCCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEcC
Confidence            999999999999998865434569999999999999999999999999999999999999999 5899999999999998


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChh-HHHHhcCCccEEEECCCChhhHHHHHhcccCCc
Q 021831          184 GGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD-IELAIKGKFDAVLDTIGAPETERLGLNFLKRGG  262 (307)
Q Consensus       184 ~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G  262 (307)
                      +|++|++++|+|+.+|++|++++++++.+.++++|+++++++++.+ +.+.+ .++|++|||+|+. ....++++++++|
T Consensus       162 ~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~-~g~D~v~d~~g~~-~~~~~~~~l~~~G  239 (321)
T 3tqh_A          162 AGGVGHLAIQLAKQKGTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAIS-TPVDAVIDLVGGD-VGIQSIDCLKETG  239 (321)
T ss_dssp             TSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHCC-SCEEEEEESSCHH-HHHHHGGGEEEEE
T ss_pred             CcHHHHHHHHHHHHcCCEEEEEeccchHHHHHHcCCCEEEeCCCcchhhhhc-cCCCEEEECCCcH-HHHHHHHhccCCC
Confidence            9999999999999999999999877777889999999999998877 66655 6799999999998 5599999999999


Q ss_pred             EEEEeccCcc
Q 021831          263 HYMTLHGETA  272 (307)
Q Consensus       263 ~~v~~g~~~~  272 (307)
                      +++.+|....
T Consensus       240 ~iv~~g~~~~  249 (321)
T 3tqh_A          240 CIVSVPTITA  249 (321)
T ss_dssp             EEEECCSTTH
T ss_pred             EEEEeCCCCc
Confidence            9999987653

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=4.7e-45  Score=334.11  Aligned_cols=256  Identities=26%  Similarity=0.368  Sum_probs=215.5

Q ss_pred             cccccCcccccccccccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCc
Q 021831           11 NDYLVSPLRFVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPL   90 (307)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~   90 (307)
                      .+.......+....||++||+++++++ +++.++++ +.+.|+|++|||+|||.++|||++|++++.|...  ....+|.
T Consensus        10 ~~~~~~~~~~~~~~m~~~mkA~~~~~~-~~~~l~~~-e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~P~   85 (363)
T 3uog_A           10 GVDLGTENLYFQSMMSKWMQEWSTETV-APHDLKLA-ERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMG--LDLAFPF   85 (363)
T ss_dssp             -------------CCCSEEEEEEBSCT-TTTCCEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTT--CCCCSSB
T ss_pred             cCCCCCceeEEeccCchhhEEEEEccC-CCCCcEEE-eeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC--CCCCCCc
Confidence            344445555566678999999999988 55779999 9999999999999999999999999999998532  1356899


Q ss_pred             ccccceEEEEEEecCCCCCCCCCCEEEEecC--------------------CCCCCCcceeEEEecCCceeeCCCCCChh
Q 021831           91 ILGRDISGEVAAVGASVRSLTVGQEVFGALH--------------------PTAVRGTYADYAVLSEDELTPKPVSVTHA  150 (307)
Q Consensus        91 ~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~--------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~  150 (307)
                      ++|||++|+|+++|++|++|++||||++.+.                    +...+|+|+||+.+|.+.++++|++++++
T Consensus        86 v~GhE~~G~V~~vG~~v~~~~vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~  165 (363)
T 3uog_A           86 VPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAA  165 (363)
T ss_dssp             CCCCEEEEEEEEECTTCCSCCTTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHH
T ss_pred             CcccceEEEEEEECCCCCCCCCCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHHeEECCCCCCHH
Confidence            9999999999999999999999999998721                    12246999999999999999999999999


Q ss_pred             hhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChh
Q 021831          151 DASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKD  229 (307)
Q Consensus       151 ~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~  229 (307)
                      +++.++++++|||+++.+.+++++|++|||+| +|++|++++|+|+.+|++|+++.++ ++.+.++++|++++++...++
T Consensus       166 ~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~  244 (363)
T 3uog_A          166 EASTLPCAGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEED  244 (363)
T ss_dssp             HHHTTTTHHHHHHHHHTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSC
T ss_pred             HHhhcccHHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCccc
Confidence            99999999999999997789999999999999 7999999999999999999999765 556778999999999965566


Q ss_pred             HHHHhc----C-CccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          230 IELAIK----G-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       230 ~~~~~~----~-~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      +.+.+.    + ++|+|||++|+. .+..++++++++|+++.+|....
T Consensus       245 ~~~~v~~~~~g~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~  291 (363)
T 3uog_A          245 WVERVYALTGDRGADHILEIAGGA-GLGQSLKAVAPDGRISVIGVLEG  291 (363)
T ss_dssp             HHHHHHHHHTTCCEEEEEEETTSS-CHHHHHHHEEEEEEEEEECCCSS
T ss_pred             HHHHHHHHhCCCCceEEEECCChH-HHHHHHHHhhcCCEEEEEecCCC
Confidence            665543    3 899999999976 89999999999999999997643

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=5.2e-45  Score=332.59  Aligned_cols=251  Identities=31%  Similarity=0.465  Sum_probs=220.0

Q ss_pred             cccCcccccccccccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCccc
Q 021831           13 YLVSPLRFVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLIL   92 (307)
Q Consensus        13 ~~~~~~~~~~~~~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~   92 (307)
                      ....++-|-...||++||++++++++.++.++++ +.+.|+|+++||+|||.++|||++|++++.|...  ....+|.++
T Consensus        13 ~~~~~~~~~~~~~p~~MkA~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~i~   89 (353)
T 4dup_A           13 LGTENLYFQSMSLPQEMRFVDLKSFGGPDVMVIG-KRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYP--PPKDASPIL   89 (353)
T ss_dssp             ----------CCCCSSEEEEEESSSSSGGGEEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSC--CCTTSCSSS
T ss_pred             CCcceeeeecCCCChheeEEEEccCCCccceEEE-eccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCC--CCCCCCCcc
Confidence            4456777778889999999999999988999999 9999999999999999999999999999998543  224578999


Q ss_pred             ccceEEEEEEecCCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCC
Q 021831           93 GRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARM  172 (307)
Q Consensus        93 G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~  172 (307)
                      |||++|+|+++|+++++|++||||++...    +|+|+||+.+|.+.++++|++++++++++++.++.|||+++.+.+++
T Consensus        90 G~E~~G~V~~vG~~v~~~~vGdrV~~~~~----~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~  165 (353)
T 4dup_A           90 GLELSGEIVGVGPGVSGYAVGDKVCGLAN----GGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGL  165 (353)
T ss_dssp             CCEEEEEEEEECTTCCSCCTTCEEEEECS----SCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCC
T ss_pred             ccccEEEEEEECCCCCCCCCCCEEEEecC----CCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCC
Confidence            99999999999999999999999998754    59999999999999999999999999999999999999999778999


Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc----CCccEEEECCCC
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGA  247 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~----~~~dvvid~~g~  247 (307)
                      ++|++|||+||+|++|++++|+++..|++|+++.++ ++.+.++++|+++++++++.++.+.+.    +++|++|||+|+
T Consensus       166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~  245 (353)
T 4dup_A          166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGA  245 (353)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCG
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCH
Confidence            999999999989999999999999999999999755 456778999999999998877666554    489999999999


Q ss_pred             hhhHHHHHhcccCCcEEEEeccCc
Q 021831          248 PETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       248 ~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      . .+..++++|+++|+++.+|...
T Consensus       246 ~-~~~~~~~~l~~~G~iv~~g~~~  268 (353)
T 4dup_A          246 A-YFERNIASLAKDGCLSIIAFLG  268 (353)
T ss_dssp             G-GHHHHHHTEEEEEEEEECCCTT
T ss_pred             H-HHHHHHHHhccCCEEEEEEecC
Confidence            8 8899999999999999999754

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=6.2e-45  Score=329.73  Aligned_cols=240  Identities=24%  Similarity=0.404  Sum_probs=216.2

Q ss_pred             cccccccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEE
Q 021831           21 VRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEV  100 (307)
Q Consensus        21 ~~~~~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V  100 (307)
                      |...+|++||++++++++.++.++++ +.+.|+|++|||+|||.++|||++|+++..|..    +..+|.++|||++|+|
T Consensus         1 M~~~~p~~mka~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~----~~~~P~i~G~e~~G~V   75 (334)
T 3qwb_A            1 MKCTIPEQQKVILIDEIGGYDVIKYE-DYPVPSISEEELLIKNKYTGVNYIESYFRKGIY----PCEKPYVLGREASGTV   75 (334)
T ss_dssp             ----CCSEEEEEEESSSSSGGGEEEE-EEECCCCCTTEEEEEEEEEECCTTHHHHHHTSS----CCCSSEECCSEEEEEE
T ss_pred             CCCCCchheEEEEEecCCCCceeEEE-eccCCCCCCCEEEEEEEEEecCHHHHHHHCCCC----CCCCCCccccceEEEE
Confidence            44568899999999999888889999 999999999999999999999999999999843    3457999999999999


Q ss_pred             EEecCCCCCCCCCCEEEEecCCCCCCCcceeEEEec-CCceeeCCCCCChhh---hccccchHHHHHHHHHHHcCCCCCC
Q 021831          101 AAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLS-EDELTPKPVSVTHAD---ASAIPFAALTAWRALKCAARMSEGQ  176 (307)
Q Consensus       101 ~~~G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~-~~~~~~ip~~~~~~~---aa~~~~~~~ta~~~l~~~~~~~~g~  176 (307)
                      +++|+++++|++||||++...     |+|+||+.++ .+.++++|+++++++   +++++..+.|||+++.+..++++|+
T Consensus        76 ~~vG~~v~~~~~GdrV~~~~~-----G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~  150 (334)
T 3qwb_A           76 VAKGKGVTNFEVGDQVAYISN-----STFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGD  150 (334)
T ss_dssp             EEECTTCCSCCTTCEEEEECS-----SCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTC
T ss_pred             EEECCCCCCCCCCCEEEEeeC-----CcceEEEEecCcceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCC
Confidence            999999999999999998865     9999999999 999999999999999   8888889999999998778999999


Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhh
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPET  250 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~  250 (307)
                      +|||+||+|++|++++|+++.+|++|+++.++ ++.+.++++|+++++++++.++.+.+.     .++|++||++|+. .
T Consensus       151 ~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~-~  229 (334)
T 3qwb_A          151 YVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKD-T  229 (334)
T ss_dssp             EEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCGGG-G
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCChH-H
Confidence            99999999999999999999999999999775 456778999999999998877666554     3799999999986 8


Q ss_pred             HHHHHhcccCCcEEEEeccCc
Q 021831          251 ERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +..++++|+++|+++.+|...
T Consensus       230 ~~~~~~~l~~~G~iv~~G~~~  250 (334)
T 3qwb_A          230 FEISLAALKRKGVFVSFGNAS  250 (334)
T ss_dssp             HHHHHHHEEEEEEEEECCCTT
T ss_pred             HHHHHHHhccCCEEEEEcCCC
Confidence            999999999999999999754

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=3.8e-44  Score=325.58  Aligned_cols=240  Identities=25%  Similarity=0.356  Sum_probs=211.7

Q ss_pred             ccccccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEE
Q 021831           22 RFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVA  101 (307)
Q Consensus        22 ~~~~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~  101 (307)
                      .+.+|++||+++++.++.++.++++ +.+.|+|++|||+|||.++|||++|++++.|...  ....+|.++|||++|+|+
T Consensus        15 ~~~~p~~MkA~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~v~G~E~~G~V~   91 (342)
T 4eye_A           15 QTQGPGSMKAIQAQSLSGPEGLVYT-DVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQ--LKMEPPFVPGIETAGVVR   91 (342)
T ss_dssp             ---CCCEEEEEEECSSSGGGGEEEE-EEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSS--SCCCSSBCCCSEEEEEEE
T ss_pred             cccCCcceEEEEEecCCCCceeEEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC--CCCCCCCccceeEEEEEE
Confidence            4457889999999999888899999 9999999999999999999999999999998532  234679999999999999


Q ss_pred             EecCCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEE
Q 021831          102 AVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVL  181 (307)
Q Consensus       102 ~~G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~  181 (307)
                      ++|++++ |++||||++...    +|+|+||+.++.+.++++|++++++++++++.++.|||+++.+.+++++|++|||+
T Consensus        92 ~vG~~v~-~~vGDrV~~~~~----~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~  166 (342)
T 4eye_A           92 SAPEGSG-IKPGDRVMAFNF----IGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVL  166 (342)
T ss_dssp             ECCTTSS-CCTTCEEEEECS----SCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEES
T ss_pred             EECCCCC-CCCCCEEEEecC----CCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEE
Confidence            9999999 999999998853    49999999999999999999999999999999999999999878999999999999


Q ss_pred             cCCchHHHHHHHHHHHcCCEEEEEeC-CccHHHHHHcCCceEEeCCChhHHHHhc----C-CccEEEECCCChhhHHHHH
Q 021831          182 GGGGAVGFAAVQFSVASGCHVSATCG-SKSIDRVLAAGAEQAVDYSSKDIELAIK----G-KFDAVLDTIGAPETERLGL  255 (307)
Q Consensus       182 Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~----~-~~dvvid~~g~~~~~~~~~  255 (307)
                      |++|++|++++|+++.+|++|+++.+ .++.+.++++|+++++++. .++.+.+.    + ++|++|||+|+. .+..++
T Consensus       167 Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~g~~-~~~~~~  244 (342)
T 4eye_A          167 GAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVDMVVDPIGGP-AFDDAV  244 (342)
T ss_dssp             STTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCEEEEEESCC---CHHHHH
T ss_pred             CCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCceEEEECCchh-HHHHHH
Confidence            99999999999999999999999976 4567778999999999988 66665544    3 799999999998 889999


Q ss_pred             hcccCCcEEEEeccCc
Q 021831          256 NFLKRGGHYMTLHGET  271 (307)
Q Consensus       256 ~~l~~~G~~v~~g~~~  271 (307)
                      ++++++|+++.+|...
T Consensus       245 ~~l~~~G~iv~~G~~~  260 (342)
T 4eye_A          245 RTLASEGRLLVVGFAA  260 (342)
T ss_dssp             HTEEEEEEEEEC----
T ss_pred             HhhcCCCEEEEEEccC
Confidence            9999999999999654

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=3.3e-44  Score=325.76  Aligned_cols=240  Identities=28%  Similarity=0.367  Sum_probs=214.8

Q ss_pred             cccceeEEEEcccCCC-ceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEe
Q 021831           25 VTTSCRAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAV  103 (307)
Q Consensus        25 ~~~~~ka~~~~~~~~~-~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~  103 (307)
                      |+++||++++++++.+ +.++++ +.+.|+|++|||+|||.++|||++|++++.|.+..  ...+|.++|||++|+|+++
T Consensus         1 M~~~mka~~~~~~g~p~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~i~G~E~~G~V~~v   77 (340)
T 3gms_A            1 MSLHGKLIQFHKFGNPKDVLQVE-YKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAH--RIPLPNIPGYEGVGIVENV   77 (340)
T ss_dssp             -CCEEEEEEESSCSCHHHHEEEE-EEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTT--TSCSSBCCCSCCEEEEEEE
T ss_pred             CCcccEEEEEecCCCchheEEEE-ecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCC--CCCCCCcCCcceEEEEEEe
Confidence            4568999999999887 679999 99999999999999999999999999999985322  3478999999999999999


Q ss_pred             cCCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcC
Q 021831          104 GASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGG  183 (307)
Q Consensus       104 G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga  183 (307)
                      |++|++|++||||++...    +|+|+||+.+|.+.++++|++++++++++++..++|+|+++.+.+++++|++|||+|+
T Consensus        78 G~~v~~~~vGdrV~~~~~----~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga  153 (340)
T 3gms_A           78 GAFVSRELIGKRVLPLRG----EGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNAC  153 (340)
T ss_dssp             CTTSCGGGTTCEEEECSS----SCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESST
T ss_pred             CCCCCCCCCCCEEEecCC----CccceeEEEcCHHHeEECCCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCC
Confidence            999999999999997643    5999999999999999999999999999999999999999988899999999999999


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEeC-CccHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhc
Q 021831          184 GGAVGFAAVQFSVASGCHVSATCG-SKSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNF  257 (307)
Q Consensus       184 ~g~~G~~~~~~a~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~  257 (307)
                      +|++|++++|+++.+|++|+++.+ .++.+.++++|+++++++.+.++.+.+.     .++|++|||+|+. ....++.+
T Consensus       154 ~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~-~~~~~~~~  232 (340)
T 3gms_A          154 GSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGP-DGNELAFS  232 (340)
T ss_dssp             TSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCHH-HHHHHHHT
T ss_pred             ccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCCh-hHHHHHHH
Confidence            889999999999999999999865 4567788999999999998877666554     3899999999998 55667799


Q ss_pred             ccCCcEEEEeccCcc
Q 021831          258 LKRGGHYMTLHGETA  272 (307)
Q Consensus       258 l~~~G~~v~~g~~~~  272 (307)
                      |+++|+++.+|....
T Consensus       233 l~~~G~iv~~G~~~~  247 (340)
T 3gms_A          233 LRPNGHFLTIGLLSG  247 (340)
T ss_dssp             EEEEEEEEECCCTTS
T ss_pred             hcCCCEEEEEeecCC
Confidence            999999999997653

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=2.5e-43  Score=320.31  Aligned_cols=240  Identities=36%  Similarity=0.570  Sum_probs=211.3

Q ss_pred             cccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEec
Q 021831           25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG  104 (307)
Q Consensus        25 ~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G  104 (307)
                      +|++||+++++.++.+  ++++ +.+.|+|++|||+|||.++|||++|++++.|... .....+|.++|||++|+|+++|
T Consensus         4 ~~~~mka~~~~~~~~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~~~P~v~G~E~~G~V~~vG   79 (343)
T 3gaz_A            4 TTPTMIAAVVEEANGP--FVLR-KLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAP-HAQQPLPAILGMDLAGTVVAVG   79 (343)
T ss_dssp             --CEEEEEEECSTTCC--EEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCG-GGCCCSSBCCCCEEEEEEEEEC
T ss_pred             CchhheEEEEecCCCc--eEEE-eccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCC-CCCCCCCcccCcceEEEEEEEC
Confidence            4678999999988766  8998 9999999999999999999999999999998532 1235689999999999999999


Q ss_pred             CCCCCCCCCCEEEEecCCCC-CCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcC
Q 021831          105 ASVRSLTVGQEVFGALHPTA-VRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGG  183 (307)
Q Consensus       105 ~~v~~~~~Gd~V~~~~~~~~-~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga  183 (307)
                      +++++|++||||+++..... .+|+|+||+.++.+.++++|+++++++++.++.+++|||+++.+.+++++|++|||+||
T Consensus        80 ~~v~~~~vGdrV~~~~~g~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga  159 (343)
T 3gaz_A           80 PEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGG  159 (343)
T ss_dssp             TTCCSCCTTCEEEEECCSSTTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETT
T ss_pred             CCCCCCCCCCEEEEEeCCCCCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecC
Confidence            99999999999998764322 46999999999999999999999999999999999999999977899999999999999


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcc
Q 021831          184 GGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFL  258 (307)
Q Consensus       184 ~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l  258 (307)
                      +|++|++++|+++..|++|+++.+.++.+.++++|++. ++ +..++.+.+.     .++|++|||+|+. .+..++.+|
T Consensus       160 ~g~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~lGa~~-i~-~~~~~~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~l  236 (343)
T 3gaz_A          160 GGGVGHVAIQIALARGARVFATARGSDLEYVRDLGATP-ID-ASREPEDYAAEHTAGQGFDLVYDTLGGP-VLDASFSAV  236 (343)
T ss_dssp             TSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTSEE-EE-TTSCHHHHHHHHHTTSCEEEEEESSCTH-HHHHHHHHE
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHHcCCCE-ec-cCCCHHHHHHHHhcCCCceEEEECCCcH-HHHHHHHHH
Confidence            99999999999999999999996566677889999998 77 5555555443     3799999999986 899999999


Q ss_pred             cCCcEEEEeccCc
Q 021831          259 KRGGHYMTLHGET  271 (307)
Q Consensus       259 ~~~G~~v~~g~~~  271 (307)
                      +++|+++.+|...
T Consensus       237 ~~~G~iv~~g~~~  249 (343)
T 3gaz_A          237 KRFGHVVSCLGWG  249 (343)
T ss_dssp             EEEEEEEESCCCS
T ss_pred             hcCCeEEEEcccC
Confidence            9999999999765

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=2.6e-43  Score=323.38  Aligned_cols=239  Identities=29%  Similarity=0.435  Sum_probs=208.8

Q ss_pred             ccccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEe
Q 021831           24 LVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAV  103 (307)
Q Consensus        24 ~~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~  103 (307)
                      .||++||+++++.+   +.++++++.+.|+|+++||+|||.+++||++|++++.|.      ...|.++|||++|+|+++
T Consensus         7 ~~p~~mkA~v~~~~---~~l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~------~~~p~v~G~e~~G~V~~v   77 (371)
T 3gqv_A            7 IPPPQQTALTVNDH---DEVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF------ATPWAFLGTDYAGTVVAV   77 (371)
T ss_dssp             CCCSCEEEEEECTT---SCEEEEEEECCCCCCTTSEEEEEEEEECCGGGGC-----------CCTTSCCCSEEEEEEEEE
T ss_pred             CCchhceeEEEcCC---CceEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC------CCCCccCccccEEEEEEe
Confidence            47889999999965   457776578899999999999999999999999988772      245899999999999999


Q ss_pred             cCCCCCCCCCCEEEEecCCC----CCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHH-cCC------
Q 021831          104 GASVRSLTVGQEVFGALHPT----AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCA-ARM------  172 (307)
Q Consensus       104 G~~v~~~~~Gd~V~~~~~~~----~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~-~~~------  172 (307)
                      |++|++|++||||++.+...    ..+|+|+||+.++.+.++++|+++++++++.+++++.|||+++.+. .++      
T Consensus        78 G~~v~~~~~GdrV~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~  157 (371)
T 3gqv_A           78 GSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSAD  157 (371)
T ss_dssp             CTTCCSCCTTCEEEEECCTTCTTCTTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCS
T ss_pred             CCCCCCCCCCCEEEEeccCCCCCCCCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccc
Confidence            99999999999999887432    2469999999999999999999999999999999999999999766 553      


Q ss_pred             -----CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhc----CCccEEEE
Q 021831          173 -----SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLD  243 (307)
Q Consensus       173 -----~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~----~~~dvvid  243 (307)
                           ++|++|||+|++|++|++++|+|+.+|++|+++++.++.+.++++|+++++++.+.++.+.+.    +++|++||
T Consensus       158 ~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d  237 (371)
T 3gqv_A          158 QPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALD  237 (371)
T ss_dssp             SCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEE
T ss_pred             cccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEE
Confidence                 899999999998999999999999999999999877788889999999999999888776654    46999999


Q ss_pred             CCCChhhHHHHHhcc-cCCcEEEEeccCc
Q 021831          244 TIGAPETERLGLNFL-KRGGHYMTLHGET  271 (307)
Q Consensus       244 ~~g~~~~~~~~~~~l-~~~G~~v~~g~~~  271 (307)
                      |+|+...+..++.+| +++|+++.+|...
T Consensus       238 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  266 (371)
T 3gqv_A          238 CITNVESTTFCFAAIGRAGGHYVSLNPFP  266 (371)
T ss_dssp             SSCSHHHHHHHHHHSCTTCEEEEESSCCC
T ss_pred             CCCchHHHHHHHHHhhcCCCEEEEEecCc
Confidence            999977899999999 5999999999543

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=2.5e-43  Score=324.33  Aligned_cols=242  Identities=22%  Similarity=0.312  Sum_probs=213.5

Q ss_pred             cccccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEE
Q 021831           23 FLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAA  102 (307)
Q Consensus        23 ~~~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~  102 (307)
                      +.+|++|||++++.++.+  ++++ +.+.|+|+++||+|||.++|||++|++++.|..   ....+|.++|||++|+|++
T Consensus         3 ~~~~~tmkA~v~~~~~~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~---~~~~~P~v~GhE~~G~V~~   76 (378)
T 3uko_A            3 QGQVITCKAAVAYEPNKP--LVIE-DVQVAPPQAGEVRIKILYTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVES   76 (378)
T ss_dssp             TTSCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEEECHHHHHHHTTCC---TTCCSSBCCCCEEEEEEEE
T ss_pred             cccceeeEEEEEecCCCc--cEEE-EecCCCCCCCeEEEEEEEeecCHHHHHHhcCCC---CCCCCCccCCccceEEEEE
Confidence            457889999999987765  8888 999999999999999999999999999999853   2356899999999999999


Q ss_pred             ecCCCCCCCCCCEEEEecCCC---------------------------------------------CCCCcceeEEEecC
Q 021831          103 VGASVRSLTVGQEVFGALHPT---------------------------------------------AVRGTYADYAVLSE  137 (307)
Q Consensus       103 ~G~~v~~~~~Gd~V~~~~~~~---------------------------------------------~~~g~~~~~~~~~~  137 (307)
                      +|++|++|++||||++.....                                             ...|+|+||+.++.
T Consensus        77 vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~  156 (378)
T 3uko_A           77 VGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHD  156 (378)
T ss_dssp             ECTTCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEG
T ss_pred             eCCCCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEech
Confidence            999999999999998764310                                             01269999999999


Q ss_pred             CceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEe-CCccHHHHH
Q 021831          138 DELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATC-GSKSIDRVL  215 (307)
Q Consensus       138 ~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~-~~~~~~~~~  215 (307)
                      +.++++|+++++++++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++. +.++++.++
T Consensus       157 ~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~  235 (378)
T 3uko_A          157 VSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK  235 (378)
T ss_dssp             GGEEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH
T ss_pred             hheEECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            9999999999999999999999999999877899999999999997 9999999999999999 899996 456678899


Q ss_pred             HcCCceEEeCC--ChhHHHHhc----CCccEEEECCCChhhHHHHHhcccCC-cEEEEeccCc
Q 021831          216 AAGAEQAVDYS--SKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGET  271 (307)
Q Consensus       216 ~~g~~~v~~~~--~~~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~  271 (307)
                      ++|+++++++.  +.++.+.+.    +++|+|||++|+...+..++++++++ |+++.+|...
T Consensus       236 ~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~  298 (378)
T 3uko_A          236 KFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA  298 (378)
T ss_dssp             TTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCC
T ss_pred             HcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccC
Confidence            99999999987  455655543    58999999999977899999999996 9999999754

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=1.4e-43  Score=324.23  Aligned_cols=249  Identities=25%  Similarity=0.334  Sum_probs=213.7

Q ss_pred             cccccccccccceeEEEEccc---CCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccc
Q 021831           17 PLRFVRFLVTTSCRAVVLPRF---GGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILG   93 (307)
Q Consensus        17 ~~~~~~~~~~~~~ka~~~~~~---~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G   93 (307)
                      ++.....++|++||+++++.+   +++..++++ +.+.|+|+++||+|||.++|||++|++++.|...   ...+|.++|
T Consensus        11 ~~~~~~~~~m~~MkA~~~~~~~~~~~~~~l~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~p~v~G   86 (363)
T 4dvj_A           11 VDLGTENLYFQSMKAVGYNKPAPITDDASLLDI-ELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPP---DGTDWKVIG   86 (363)
T ss_dssp             --------CCCEEEEEEBSSCCCTTSTTSSEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC-----CCSBCCC
T ss_pred             ccccchhhhhheeEEEEEeccCCCCCCceEEEe-ecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCC---CCCCCCccc
Confidence            344445567789999999988   567889999 9999999999999999999999999999998532   246789999


Q ss_pred             cceEEEEEEecCCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCC
Q 021831           94 RDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMS  173 (307)
Q Consensus        94 ~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~  173 (307)
                      ||++|+|+++|++|++|++||||++... ...+|+|+||+.++.+.++++|+++++++++.++++++|||+++.+..+++
T Consensus        87 ~E~~G~V~~vG~~v~~~~vGdrV~~~~~-~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~  165 (363)
T 4dvj_A           87 YDAAGIVSAVGPDVTLFRPGDEVFYAGS-IIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVN  165 (363)
T ss_dssp             CCEEEEEEEECTTCCSCCTTCEEEECCC-TTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTT
T ss_pred             ceeEEEEEEeCCCCCCCCCCCEEEEccC-CCCCccceEEEEeCHHHeeECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcC
Confidence            9999999999999999999999987642 234599999999999999999999999999999999999999998788888


Q ss_pred             -----CCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc----CCccEEE
Q 021831          174 -----EGQRLLVLGGGGAVGFAAVQFSVA-SGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVL  242 (307)
Q Consensus       174 -----~g~~VlI~Ga~g~~G~~~~~~a~~-~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~----~~~dvvi  242 (307)
                           +|++|||+||+|++|++++|+|+. .|++|+++.++ ++.+.++++|+++++++.+ ++.+.+.    +++|+||
T Consensus       166 ~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~-~~~~~v~~~~~~g~Dvvi  244 (363)
T 4dvj_A          166 KPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVIDHSK-PLAAEVAALGLGAPAFVF  244 (363)
T ss_dssp             SCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSEEECTTS-CHHHHHHTTCSCCEEEEE
T ss_pred             cCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCC-CHHHHHHHhcCCCceEEE
Confidence                 899999999999999999999998 58899999775 5567799999999999875 4555443    4899999


Q ss_pred             ECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          243 DTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       243 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ||+|+...+..++++|+++|+++.+|.+.
T Consensus       245 d~~g~~~~~~~~~~~l~~~G~iv~~g~~~  273 (363)
T 4dvj_A          245 STTHTDKHAAEIADLIAPQGRFCLIDDPS  273 (363)
T ss_dssp             ECSCHHHHHHHHHHHSCTTCEEEECSCCS
T ss_pred             ECCCchhhHHHHHHHhcCCCEEEEECCCC
Confidence            99998878899999999999999998654

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=2.5e-43  Score=323.99  Aligned_cols=246  Identities=37%  Similarity=0.611  Sum_probs=216.9

Q ss_pred             cccceeEEEEcccCCCceeEE-cCcccCCCC-CCCeEEEEEeeeecChhhHHHHhCCCccc------------cCCCCCc
Q 021831           25 VTTSCRAVVLPRFGGPEVLEV-RPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSI------------FEPLLPL   90 (307)
Q Consensus        25 ~~~~~ka~~~~~~~~~~~~~~-~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~------------~~~~~p~   90 (307)
                      ++++||+++++.++.+..+++ + +.+.|.| +++||+|||.++|||++|++++.|.....            ....+|.
T Consensus        18 ~~~~mka~~~~~~g~~~~l~~~~-~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~   96 (375)
T 2vn8_A           18 LYFQSMAWVIDKYGKNEVLRFTQ-NMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPL   96 (375)
T ss_dssp             CCCCEEEEEBSSCCSGGGCEEEE-EECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSB
T ss_pred             cCccceeEEeccCCCccceEEec-cccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCc
Confidence            567899999999988888999 7 8899985 99999999999999999999998853211            1123789


Q ss_pred             ccccceEEEEEEecCCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHc
Q 021831           91 ILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAA  170 (307)
Q Consensus        91 ~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~  170 (307)
                      ++|||++|+|+++|++|++|++||||++.... ..+|+|+||+.++.+.++++|++++++++++++.+++|||+++.+.+
T Consensus        97 v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~-~~~G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~  175 (375)
T 2vn8_A           97 TLGRDVSGVVMECGLDVKYFKPGDEVWAAVPP-WKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVG  175 (375)
T ss_dssp             CCCCEEEEEEEEECTTCCSCCTTCEEEEECCT-TSCCSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTT
T ss_pred             ccceeeeEEEEEeCCCCCCCCCCCEEEEecCC-CCCccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999987532 23599999999999999999999999999999999999999997678


Q ss_pred             C----CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhc--CCccEEEEC
Q 021831          171 R----MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK--GKFDAVLDT  244 (307)
Q Consensus       171 ~----~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~--~~~dvvid~  244 (307)
                      +    +++|++|||+||+|++|++++|+|+.+|++|+++.++++.+.++++|+++++++++.++.+.+.  +++|++|||
T Consensus       176 ~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~  255 (375)
T 2vn8_A          176 GLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDN  255 (375)
T ss_dssp             CCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEES
T ss_pred             ccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEEC
Confidence            8    8999999999999999999999999999999998877777889999999999998877776665  479999999


Q ss_pred             CCCh-hhHHHHHhcccCCcEEEEeccCcc
Q 021831          245 IGAP-ETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       245 ~g~~-~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      +|+. ..+..++++++++|+++.+|....
T Consensus       256 ~g~~~~~~~~~~~~l~~~G~iv~~g~~~~  284 (375)
T 2vn8_A          256 VGGSTETWAPDFLKKWSGATYVTLVTPFL  284 (375)
T ss_dssp             SCTTHHHHGGGGBCSSSCCEEEESCCSHH
T ss_pred             CCChhhhhHHHHHhhcCCcEEEEeCCCcc
Confidence            9998 466889999999999999997643

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.1e-43  Score=323.32  Aligned_cols=235  Identities=27%  Similarity=0.395  Sum_probs=204.8

Q ss_pred             cceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCC
Q 021831           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (307)
Q Consensus        27 ~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~  106 (307)
                      ++||+++++.++.++.++++ +.+.|+|+++||+|||.++|||++|++++.|...  ....+|.++|||++|+|+++|++
T Consensus         2 m~mka~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~v~G~e~~G~V~~vG~~   78 (349)
T 4a27_A            2 MEMRAVVLAGFGGLNKLRLF-RKAMPEPQDGELKIRVKACGLNFIDLMVRQGNID--NPPKTPLVPGFECSGIVEALGDS   78 (349)
T ss_dssp             CCEEEEEECSSSSGGGEEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSS--SCCCSSBCCCSEEEEEEEEECTT
T ss_pred             ceeEEEEEccCCCcceeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcC--CCCCCCccccceeEEEEEEeCCC
Confidence            57999999999988889999 9999999999999999999999999999998532  23568999999999999999999


Q ss_pred             CCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCch
Q 021831          107 VRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGA  186 (307)
Q Consensus       107 v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~  186 (307)
                      +++|++||||+++..    +|+|+||+.++.+.++++|+++++++++.++++++|||+++.+.+++++|++|||+|++|+
T Consensus        79 v~~~~~GdrV~~~~~----~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~  154 (349)
T 4a27_A           79 VKGYEIGDRVMAFVN----YNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGG  154 (349)
T ss_dssp             CCSCCTTCEEEEECS----SCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSH
T ss_pred             CCCCCCCCEEEEecC----CCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcH
Confidence            999999999998864    4999999999999999999999999999999999999999987899999999999999999


Q ss_pred             HHHHHHHHHHHcC-CEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhc----CCccEEEECCCChhhHHHHHhcccCC
Q 021831          187 VGFAAVQFSVASG-CHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG  261 (307)
Q Consensus       187 ~G~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~  261 (307)
                      +|++++|+|+.+| ++|+++.+.++.+.++ +|++++++ .+.++.+.+.    +++|+||||+|+. ....++++|+++
T Consensus       155 vG~~a~qla~~~g~~~V~~~~~~~~~~~~~-~ga~~~~~-~~~~~~~~~~~~~~~g~Dvv~d~~g~~-~~~~~~~~l~~~  231 (349)
T 4a27_A          155 VGQAVAQLCSTVPNVTVFGTASTFKHEAIK-DSVTHLFD-RNADYVQEVKRISAEGVDIVLDCLCGD-NTGKGLSLLKPL  231 (349)
T ss_dssp             HHHHHHHHHTTSTTCEEEEEECGGGHHHHG-GGSSEEEE-TTSCHHHHHHHHCTTCEEEEEEECC--------CTTEEEE
T ss_pred             HHHHHHHHHHHcCCcEEEEeCCHHHHHHHH-cCCcEEEc-CCccHHHHHHHhcCCCceEEEECCCch-hHHHHHHHhhcC
Confidence            9999999999986 5999988777777777 99999999 6666665554    5899999999998 568999999999


Q ss_pred             cEEEEeccCc
Q 021831          262 GHYMTLHGET  271 (307)
Q Consensus       262 G~~v~~g~~~  271 (307)
                      |+++.+|...
T Consensus       232 G~~v~~G~~~  241 (349)
T 4a27_A          232 GTYILYGSSN  241 (349)
T ss_dssp             EEEEEEC---
T ss_pred             CEEEEECCCc
Confidence            9999999753

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=8.3e-43  Score=316.48  Aligned_cols=238  Identities=28%  Similarity=0.383  Sum_probs=210.5

Q ss_pred             ceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCC
Q 021831           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (307)
Q Consensus        28 ~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v  107 (307)
                      +||+++++.++.+  ++++ +.+.|+|++|||+|||.++|||++|++++.|...  ....+|.++|||++|+|+++|+++
T Consensus         2 ~MkA~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~P~v~G~E~~G~V~~vG~~v   76 (340)
T 3s2e_A            2 MMKAAVVRAFGAP--LTID-EVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWP--VKPTLPFIPGHEGVGYVSAVGSGV   76 (340)
T ss_dssp             EEEEEEBCSTTSC--CEEE-EEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSS--SCCCSSBCCCSEEEEEEEEECSSC
T ss_pred             ceEEEEEecCCCC--CEEE-EccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCC--CCCCCCcccCCcceEEEEEECCCC
Confidence            4999999987765  8888 9999999999999999999999999999999532  124689999999999999999999


Q ss_pred             CCCCCCCEEEEec------------------------CCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHH
Q 021831          108 RSLTVGQEVFGAL------------------------HPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAW  163 (307)
Q Consensus       108 ~~~~~Gd~V~~~~------------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~  163 (307)
                      ++|++||||....                        .+...+|+|+||+.++.+.++++|+++++++++.+++++.|||
T Consensus        77 ~~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~  156 (340)
T 3s2e_A           77 SRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVY  156 (340)
T ss_dssp             CSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHH
T ss_pred             CcCCCCCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHHH
Confidence            9999999995321                        1123469999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc---CCcc
Q 021831          164 RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK---GKFD  239 (307)
Q Consensus       164 ~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~---~~~d  239 (307)
                      ++++ ..++++|++|||+|+ |++|++++|+|+.+|++|+++.++ ++.+.++++|+++++++.+.++.+.+.   +++|
T Consensus       157 ~~l~-~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d  234 (340)
T 3s2e_A          157 KGLK-VTDTRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAH  234 (340)
T ss_dssp             HHHH-TTTCCTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEE
T ss_pred             HHHH-HcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCC
Confidence            9995 789999999999996 999999999999999999999654 556779999999999998877666554   5899


Q ss_pred             EEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          240 AVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       240 vvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      ++||++|+...+..++++|+++|+++.+|....
T Consensus       235 ~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~  267 (340)
T 3s2e_A          235 GVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPG  267 (340)
T ss_dssp             EEEESSCCHHHHHHHHHHEEEEEEEEECSCCSS
T ss_pred             EEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCC
Confidence            999999988799999999999999999997653

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=8.2e-44  Score=319.81  Aligned_cols=231  Identities=23%  Similarity=0.346  Sum_probs=200.7

Q ss_pred             ccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecC
Q 021831           26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (307)
Q Consensus        26 ~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~  105 (307)
                      |++||+++++.  .++.++++ +.+.|+|+++||+|||.++|||++|++++.|...   ...+|.++|||++|+|+++|+
T Consensus         2 M~tMka~~~~~--~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~   75 (315)
T 3goh_A            2 MEQHQVWAYQT--KTHSVTLN-SVDIPALAADDILVQNQAIGINPVDWKFIKANPI---NWSNGHVPGVDGAGVIVKVGA   75 (315)
T ss_dssp             CCEEEEEEEET--TTTEEEEE-EEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTT---CCCTTCCCCSEEEEEEEEECT
T ss_pred             CcceEEEEEeC--CCCeeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCC---cCCCCCEeeeeeEEEEEEeCC
Confidence            45799999996  56779999 9999999999999999999999999999998532   246899999999999999999


Q ss_pred             CCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCc
Q 021831          106 SVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGG  185 (307)
Q Consensus       106 ~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g  185 (307)
                      ++++|++||||++... ...+|+|+||++++.+.++++|++++++++++++.+++|||+++ +.+++++|++|||+|+ |
T Consensus        76 ~v~~~~vGdrV~~~~~-~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G  152 (315)
T 3goh_A           76 KVDSKMLGRRVAYHTS-LKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAF-EKIPLTKQREVLIVGF-G  152 (315)
T ss_dssp             TSCGGGTTCEEEEECC-TTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECC-S
T ss_pred             CCCCCCCCCEEEEeCC-CCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEECC-C
Confidence            9999999999998763 22359999999999999999999999999999999999999999 6899999999999998 9


Q ss_pred             hHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhHHHHHhcccCCcEEE
Q 021831          186 AVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYM  265 (307)
Q Consensus       186 ~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v  265 (307)
                      ++|++++|+|+.+|++|+++++.++.+.++++|++++++    + .+.+.+++|++|||+|+. ....++++|+++|+++
T Consensus       153 ~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~----d-~~~v~~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v  226 (315)
T 3goh_A          153 AVNNLLTQMLNNAGYVVDLVSASLSQALAAKRGVRHLYR----E-PSQVTQKYFAIFDAVNSQ-NAAALVPSLKANGHII  226 (315)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECSSCCHHHHHHHTEEEEES----S-GGGCCSCEEEEECC--------TTGGGEEEEEEEE
T ss_pred             HHHHHHHHHHHHcCCEEEEEEChhhHHHHHHcCCCEEEc----C-HHHhCCCccEEEECCCch-hHHHHHHHhcCCCEEE
Confidence            999999999999999999999667788899999999984    2 333345899999999998 5688999999999999


Q ss_pred             EeccCc
Q 021831          266 TLHGET  271 (307)
Q Consensus       266 ~~g~~~  271 (307)
                      .+|...
T Consensus       227 ~~g~~~  232 (315)
T 3goh_A          227 CIQDRI  232 (315)
T ss_dssp             EECCC-
T ss_pred             EEeCCC
Confidence            998654

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=1.9e-43  Score=318.80  Aligned_cols=236  Identities=30%  Similarity=0.418  Sum_probs=214.6

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++++++++.++.++++ +.+.|+|++|||+|||.++|||++|++++.|....   ..+|.++|||++|+|+++|++++
T Consensus         2 MkA~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~e~~G~V~~vG~~v~   77 (325)
T 3jyn_A            2 AKRIQFSTVGGPEVLEYV-DFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPA---PFLPSGLGAEGAGVVEAVGDEVT   77 (325)
T ss_dssp             EEEEEBSSCSSGGGCEEE-EECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC---SSSSBCCCCCEEEEEEEECTTCC
T ss_pred             cEEEEEecCCCcceeEEe-ecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC---CCCCCCCCceeEEEEEEECCCCC
Confidence            899999999999999999 99999999999999999999999999999985322   46799999999999999999999


Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHH
Q 021831          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG  188 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G  188 (307)
                      +|++||||++...   .+|+|+||+.++.+.++++|+++++++++.++..++|+|+++.+.+++++|++|||+||+|++|
T Consensus        78 ~~~~GdrV~~~~~---~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG  154 (325)
T 3jyn_A           78 RFKVGDRVAYGTG---PLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVG  154 (325)
T ss_dssp             SCCTTCEEEESSS---SSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHH
T ss_pred             CCCCCCEEEEecC---CCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHH
Confidence            9999999987652   2499999999999999999999999999999999999999998888999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCCc
Q 021831          189 FAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGG  262 (307)
Q Consensus       189 ~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G  262 (307)
                      ++++|+++.+|++|+++.++ ++.+.++++|+++++++++.++.+.+.     .++|++||++|+. .+..++++++++|
T Consensus       155 ~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G  233 (325)
T 3jyn_A          155 SLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQD-TWLTSLDSVAPRG  233 (325)
T ss_dssp             HHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCGG-GHHHHHTTEEEEE
T ss_pred             HHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCChH-HHHHHHHHhcCCC
Confidence            99999999999999999765 456778999999999998877766554     3799999999996 8999999999999


Q ss_pred             EEEEeccCcc
Q 021831          263 HYMTLHGETA  272 (307)
Q Consensus       263 ~~v~~g~~~~  272 (307)
                      +++.+|....
T Consensus       234 ~iv~~g~~~~  243 (325)
T 3jyn_A          234 LVVSFGNASG  243 (325)
T ss_dssp             EEEECCCTTC
T ss_pred             EEEEEecCCC
Confidence            9999997643

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=2.7e-43  Score=320.39  Aligned_cols=237  Identities=26%  Similarity=0.375  Sum_probs=211.5

Q ss_pred             cceeEEEEcccC---CCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEe
Q 021831           27 TSCRAVVLPRFG---GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAV  103 (307)
Q Consensus        27 ~~~ka~~~~~~~---~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~  103 (307)
                      ++||+++++++|   +++.++++ +.+.|+|++|||+|||.+++||++|++++.|.     ...+|.++|||++|+|+++
T Consensus         1 m~MkA~~~~~~G~~~~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~-----~~~~p~i~G~e~~G~V~~v   74 (346)
T 3fbg_A            1 MSLKAIGFEQPFKLSDGNLFKTF-NLDIPEPKVHEILVKIQSISVNPVDTKQRLMD-----VSKAPRVLGFDAIGVVESV   74 (346)
T ss_dssp             -CEEEEEBSSCCCGGGCCCCEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHTTSC-----CSSSCBCCCCCEEEEEEEE
T ss_pred             CCcEEEEEEeccccCCCceeEec-cccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC-----CCCCCcCcCCccEEEEEEe
Confidence            469999999987   67889999 99999999999999999999999999998883     3567999999999999999


Q ss_pred             cCCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCC------CCCE
Q 021831          104 GASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMS------EGQR  177 (307)
Q Consensus       104 G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~------~g~~  177 (307)
                      |++|++|++||||++... ...+|+|+||+.++.+.++++|+++++++++.++++++|||+++.+..+++      +|++
T Consensus        75 G~~v~~~~~GdrV~~~~~-~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~  153 (346)
T 3fbg_A           75 GNEVTMFNQGDIVYYSGS-PDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKT  153 (346)
T ss_dssp             CTTCCSCCTTCEEEECCC-TTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCE
T ss_pred             CCCCCcCCCCCEEEEcCC-CCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCE
Confidence            999999999999987642 223599999999999999999999999999999999999999998788888      9999


Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc----CCccEEEECCCChhhHH
Q 021831          178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETER  252 (307)
Q Consensus       178 VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~----~~~dvvid~~g~~~~~~  252 (307)
                      |||+||+|++|++++|+|+.+|++|+++.++ ++.+.++++|+++++++.+ ++.+.+.    +++|++|||+|+...+.
T Consensus       154 VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~~~~~~g~Dvv~d~~g~~~~~~  232 (346)
T 3fbg_A          154 LLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKE-SLLNQFKTQGIELVDYVFCTFNTDMYYD  232 (346)
T ss_dssp             EEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTS-CHHHHHHHHTCCCEEEEEESSCHHHHHH
T ss_pred             EEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCc-cHHHHHHHhCCCCccEEEECCCchHHHH
Confidence            9999889999999999999999999999764 5567789999999999875 4444433    47999999999986789


Q ss_pred             HHHhcccCCcEEEEeccCc
Q 021831          253 LGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       253 ~~~~~l~~~G~~v~~g~~~  271 (307)
                      .++++|+++|+++.+|...
T Consensus       233 ~~~~~l~~~G~iv~~~~~~  251 (346)
T 3fbg_A          233 DMIQLVKPRGHIATIVAFE  251 (346)
T ss_dssp             HHHHHEEEEEEEEESSCCS
T ss_pred             HHHHHhccCCEEEEECCCC
Confidence            9999999999999998654

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=3.6e-43  Score=320.93  Aligned_cols=249  Identities=27%  Similarity=0.367  Sum_probs=209.8

Q ss_pred             ccCcccccccccccceeEEEEcccCCC-ceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCccc
Q 021831           14 LVSPLRFVRFLVTTSCRAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLIL   92 (307)
Q Consensus        14 ~~~~~~~~~~~~~~~~ka~~~~~~~~~-~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~   92 (307)
                      |..|..++. .||.+||++++.+++.+ +.++++ +.+.|+|+++||+|||.++|||++|++.+.|....  ...+|.++
T Consensus        13 ~~~~~~~~~-~m~~~mka~~~~~~g~~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~P~v~   88 (357)
T 1zsy_A           13 LGTENLYFQ-SMPARVRALVYGHHGDPAKVVELK-NLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGL--LPELPAVG   88 (357)
T ss_dssp             TTCSCCCCC-CCCCCEEEEEESSSSCHHHHEEEE-EECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC--CCCSSEEC
T ss_pred             cchhhhhhh-hCchhhEEEEEecCCCccceEEEe-eccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCC--CCCCCccc
Confidence            334444443 67889999999988775 348888 89999999999999999999999999999984321  23578999


Q ss_pred             ccceEEEEEEecCCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCC
Q 021831           93 GRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARM  172 (307)
Q Consensus        93 G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~  172 (307)
                      |||++|+|+++|++|++|++||||++...   .+|+|+||+.++.+.++++|++++++++++++++++|||+++...+++
T Consensus        89 G~E~~G~V~~vG~~v~~~~vGdrV~~~~~---~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~  165 (357)
T 1zsy_A           89 GNEGVAQVVAVGSNVTGLKPGDWVIPANA---GLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQL  165 (357)
T ss_dssp             CSCCEEEEEEECTTCCSCCTTCEEEESSS---CSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSHHHHHHHHHHHSSCC
T ss_pred             cceEEEEEEEeCCCCCCCCCCCEEEEcCC---CCccceeEEecCHHHcEECCCCCCHHHHhhhcccHHHHHHHHHHHhcc
Confidence            99999999999999999999999988653   249999999999999999999999999999998999999999877899


Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-----cHHHHHHcCCceEEeCCCh---hHHHHhcC--CccEEE
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-----SIDRVLAAGAEQAVDYSSK---DIELAIKG--KFDAVL  242 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-----~~~~~~~~g~~~v~~~~~~---~~~~~~~~--~~dvvi  242 (307)
                      ++|++|||+|++|++|++++|+|+.+|++++++++++     +.+.++++|+++++++.+.   .+.+...+  ++|+||
T Consensus       166 ~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvvi  245 (357)
T 1zsy_A          166 QPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLAL  245 (357)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSEEE
T ss_pred             CCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceEEE
Confidence            9999999999999999999999999999888886543     2456889999999986432   12111122  599999


Q ss_pred             ECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          243 DTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       243 d~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ||+|+. ....++++++++|+++.+|..
T Consensus       246 d~~g~~-~~~~~~~~l~~~G~iv~~G~~  272 (357)
T 1zsy_A          246 NCVGGK-SSTELLRQLARGGTMVTYGGM  272 (357)
T ss_dssp             ESSCHH-HHHHHHTTSCTTCEEEECCCC
T ss_pred             ECCCcH-HHHHHHHhhCCCCEEEEEecC
Confidence            999988 556789999999999999854

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=7.2e-43  Score=320.32  Aligned_cols=242  Identities=24%  Similarity=0.386  Sum_probs=209.0

Q ss_pred             cccccccccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEE
Q 021831           19 RFVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISG   98 (307)
Q Consensus        19 ~~~~~~~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G   98 (307)
                      +.++-.+|++||+++++.+   +.++++ +.+.|+|++|||+|||.++|||++|++++.|.    .+..+|.++|||++|
T Consensus        14 ~~~~~~~p~~mkA~v~~~~---~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~----~~~~~p~v~G~e~~G   85 (370)
T 4ej6_A           14 GTENLYFQSMMKAVRLESV---GNISVR-NVGIPEPGPDDLLVKVEACGICGTDRHLLHGE----FPSTPPVTLGHEFCG   85 (370)
T ss_dssp             -------CCEEEEEEEEET---TEEEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHTTS----SCCCSSEECCCSEEE
T ss_pred             cccccccchheEEEEEecC---CceEEE-EccCCCCCCCeEEEEEEEEeecHHHHHHHcCC----CCCCCCeecCcceEE
Confidence            3445567889999999965   468999 99999999999999999999999999999984    245779999999999


Q ss_pred             EEEEecCCCCCCCCCCEEEEecC-----------------------CCCCCCcceeEEEecCCceeeCCCCCChhhhccc
Q 021831           99 EVAAVGASVRSLTVGQEVFGALH-----------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAI  155 (307)
Q Consensus        99 ~V~~~G~~v~~~~~Gd~V~~~~~-----------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~  155 (307)
                      +|+++|++|++|++||||++.+.                       +...+|+|+||+.++.+.++++|+++++++++ +
T Consensus        86 ~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa-l  164 (370)
T 4ej6_A           86 IVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA-F  164 (370)
T ss_dssp             EEEEECTTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-G
T ss_pred             EEEEECCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhhEEECCCCCCHHHHh-h
Confidence            99999999999999999987432                       12346999999999999999999999999998 6


Q ss_pred             cchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHH
Q 021831          156 PFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELA  233 (307)
Q Consensus       156 ~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~  233 (307)
                      ..++.++|+++ +.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.++ ++.+.++++|++++++++..++.+.
T Consensus       165 ~~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~  242 (370)
T 4ej6_A          165 CEPLACCLHGV-DLSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEA  242 (370)
T ss_dssp             HHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHH
T ss_pred             hhHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHH
Confidence            66899999999 5899999999999997 9999999999999999 88888554 5567789999999999988877665


Q ss_pred             hc-------CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          234 IK-------GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       234 ~~-------~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +.       +++|+|||++|+...+..++++|+++|+++.+|...
T Consensus       243 i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~  287 (370)
T 4ej6_A          243 IAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLP  287 (370)
T ss_dssp             HHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCC
T ss_pred             HHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccC
Confidence            53       389999999998778999999999999999999754

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=1.2e-42  Score=317.80  Aligned_cols=239  Identities=18%  Similarity=0.254  Sum_probs=210.0

Q ss_pred             cccceeEEEEcccCCCceeEEcCc--ccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEE
Q 021831           25 VTTSCRAVVLPRFGGPEVLEVRPN--VEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAA  102 (307)
Q Consensus        25 ~~~~~ka~~~~~~~~~~~~~~~~~--~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~  102 (307)
                      +|++||+++++.++.+  ++++ +  .+.|+|+++||+|||.++|||++|++++.|...   ...+|.++|||++|+|++
T Consensus         3 ~p~~mka~~~~~~~~~--l~~~-~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~p~v~GhE~~G~V~~   76 (360)
T 1piw_A            3 YPEKFEGIAIQSHEDW--KNPK-KTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWG---NMKMPLVVGHEIVGKVVK   76 (360)
T ss_dssp             TTTCEEEEEECCSSST--TSCE-EEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTS---CCCSSEECCCCEEEEEEE
T ss_pred             CChheEEEEEecCCCC--eeEE-eccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCC---CCCCCcccCcCceEEEEE
Confidence            6778999999987644  6667 7  888999999999999999999999999998432   235799999999999999


Q ss_pred             ecCCCC-CCCCCCEEEEec-------------------------C------CCCCCCcceeEEEecCCceeeCCCCCChh
Q 021831          103 VGASVR-SLTVGQEVFGAL-------------------------H------PTAVRGTYADYAVLSEDELTPKPVSVTHA  150 (307)
Q Consensus       103 ~G~~v~-~~~~Gd~V~~~~-------------------------~------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~  150 (307)
                      +|++|+ +|++||||+...                         .      +...+|+|+||+.++.+.++++|++++++
T Consensus        77 vG~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~  156 (360)
T 1piw_A           77 LGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSH  156 (360)
T ss_dssp             ECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSCHH
T ss_pred             eCCCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCCHH
Confidence            999999 999999995421                         0      11246999999999999999999999999


Q ss_pred             hhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CccHHHHHHcCCceEEeCCCh-
Q 021831          151 DASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSIDRVLAAGAEQAVDYSSK-  228 (307)
Q Consensus       151 ~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~-  228 (307)
                      +++.++.++.|||+++.. +++++|++|||+|+ |++|++++|+|+.+|++|+++.+ .++.+.++++|+++++++.+. 
T Consensus       157 ~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~  234 (360)
T 1piw_A          157 LAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEG  234 (360)
T ss_dssp             HHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTS
T ss_pred             HhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCch
Confidence            999999999999999974 89999999999998 99999999999999999999975 566788899999999998877 


Q ss_pred             hHHHHhcCCccEEEECCCC--hhhHHHHHhcccCCcEEEEeccCc
Q 021831          229 DIELAIKGKFDAVLDTIGA--PETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       229 ~~~~~~~~~~dvvid~~g~--~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ++.+.+.+++|+|||++|+  ...+..++++|+++|+++.+|...
T Consensus       235 ~~~~~~~~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~  279 (360)
T 1piw_A          235 DWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPE  279 (360)
T ss_dssp             CHHHHSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCC
T ss_pred             HHHHHhhcCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCC
Confidence            7777766789999999998  558889999999999999999754

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=8.3e-43  Score=318.16  Aligned_cols=245  Identities=30%  Similarity=0.375  Sum_probs=212.1

Q ss_pred             cccccccccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEE
Q 021831           19 RFVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISG   98 (307)
Q Consensus        19 ~~~~~~~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G   98 (307)
                      +.....+|++||+++++.++.++.++++ +.+.|+|+++||+|||.++|||++|++++.|.+..  ...+|.++|||++|
T Consensus        13 ~~~~~~~~~~Mka~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~p~v~G~E~~G   89 (354)
T 2j8z_A           13 LGTENLYFQSMLAVHFDKPGGPENLYVK-EVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDP--PPGASNILGLEASG   89 (354)
T ss_dssp             --------CEEEEEEESSCSSGGGEEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC--CTTSCSSSCSEEEE
T ss_pred             ccccccchhheeEEEEccCCCccceEEe-ecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCC--CCCCCcccceeeEE
Confidence            3344557888999999998888889999 99999999999999999999999999999985322  23578999999999


Q ss_pred             EEEEecCCC-CCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCE
Q 021831           99 EVAAVGASV-RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQR  177 (307)
Q Consensus        99 ~V~~~G~~v-~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~  177 (307)
                      +|+++|++| ++|++||||++...    +|+|+||+.++.+.++++|++++++++++++.+++|||+++.+.+++++|++
T Consensus        90 ~V~~vG~~v~~~~~vGdrV~~~~~----~G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~  165 (354)
T 2j8z_A           90 HVAELGPGCQGHWKIGDTAMALLP----GGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDY  165 (354)
T ss_dssp             EEEEECSCC--CCCTTCEEEEECS----SCCSBSEEEEEGGGEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCE
T ss_pred             EEEEECCCcCCCCCCCCEEEEecC----CCcceeEEEeCHHHcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCE
Confidence            999999999 99999999998753    4999999999999999999999999999999999999999977889999999


Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhH
Q 021831          178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETE  251 (307)
Q Consensus       178 VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~  251 (307)
                      |||+||+|++|++++++++..|++|+++.++ ++.+.++++|++.++++++.++.+.+.     +++|++|||+|+. .+
T Consensus       166 vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~~-~~  244 (354)
T 2j8z_A          166 VLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGS-YW  244 (354)
T ss_dssp             EEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCGG-GH
T ss_pred             EEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCCch-HH
Confidence            9999999999999999999999999998765 445667889999999988776655543     3799999999998 88


Q ss_pred             HHHHhcccCCcEEEEeccCc
Q 021831          252 RLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       252 ~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ..++++|+++|+++.+|...
T Consensus       245 ~~~~~~l~~~G~iv~~G~~~  264 (354)
T 2j8z_A          245 EKNVNCLALDGRWVLYGLMG  264 (354)
T ss_dssp             HHHHHHEEEEEEEEECCCTT
T ss_pred             HHHHHhccCCCEEEEEeccC
Confidence            99999999999999999754

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=1e-42  Score=316.92  Aligned_cols=234  Identities=20%  Similarity=0.280  Sum_probs=204.4

Q ss_pred             cccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEec
Q 021831           25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG  104 (307)
Q Consensus        25 ~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G  104 (307)
                      |+++||++++.+++.  .++++ +.+.|+|+++||+|||.++|||++|++++.|...   ...+|.++|||++|+|+++|
T Consensus         1 M~m~mka~~~~~~~~--~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~p~i~G~E~~G~V~~vG   74 (348)
T 3two_A            1 MRVQSKGFAIFSKDE--HFKPH-DFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWK---EGIYPMIPGHEIAGIIKEVG   74 (348)
T ss_dssp             CCEEEEEEEBCSTTS--CCEEE-EEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSS---CCCSSBCCCCCEEEEEEEEC
T ss_pred             CceEEEEEEEccCCC--CCeEE-EeeCCCCCCCeEEEEEEEeeecccchhhhcCCCC---CCCCCeecCcceeEEEEEEC
Confidence            456899999997654  48888 9999999999999999999999999999998532   24679999999999999999


Q ss_pred             CCCCCCCCCCEEEEecC-----------------------CCC----------CCCcceeEEEecCCceeeCCCCCChhh
Q 021831          105 ASVRSLTVGQEVFGALH-----------------------PTA----------VRGTYADYAVLSEDELTPKPVSVTHAD  151 (307)
Q Consensus       105 ~~v~~~~~Gd~V~~~~~-----------------------~~~----------~~g~~~~~~~~~~~~~~~ip~~~~~~~  151 (307)
                      ++|++|++||||+....                       ...          .+|+|+||+.++.+.++++|+++++++
T Consensus        75 ~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~  154 (348)
T 3two_A           75 KGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEK  154 (348)
T ss_dssp             TTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHH
T ss_pred             CCCCCCCCCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHH
Confidence            99999999999976321                       011          129999999999999999999999999


Q ss_pred             hccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCccHHHHHHcCCceEEeCCChhH
Q 021831          152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC-GSKSIDRVLAAGAEQAVDYSSKDI  230 (307)
Q Consensus       152 aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~-~~~~~~~~~~~g~~~v~~~~~~~~  230 (307)
                      ++.+++++.|||+++. ..++++|++|||+|+ |++|++++|+|+.+|++|+++. +.++.+.++++|+++++ .+.+. 
T Consensus       155 aa~l~~~~~ta~~~l~-~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~-~~~~~-  230 (348)
T 3two_A          155 VAPLLCAGITTYSPLK-FSKVTKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFY-TDPKQ-  230 (348)
T ss_dssp             HGGGGTHHHHHHHHHH-HTTCCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEE-SSGGG-
T ss_pred             hhhhhhhHHHHHHHHH-hcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeec-CCHHH-
Confidence            9999999999999997 569999999999996 9999999999999999999986 45677889999999998 33222 


Q ss_pred             HHHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          231 ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       231 ~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                         +..++|+|||++|+...+..++++|+++|+++.+|.+.
T Consensus       231 ---~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~  268 (348)
T 3two_A          231 ---CKEELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPP  268 (348)
T ss_dssp             ---CCSCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCC
T ss_pred             ---HhcCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCC
Confidence               22389999999999878999999999999999999776

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=2.5e-42  Score=317.10  Aligned_cols=240  Identities=23%  Similarity=0.294  Sum_probs=209.0

Q ss_pred             cccccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEE
Q 021831           23 FLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAA  102 (307)
Q Consensus        23 ~~~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~  102 (307)
                      .+.|++||++++..++.+  ++++ +.+.|+|+++||+|||.++|||++|++++.|...    ..+|.++|||++|+|++
T Consensus         4 ~~~p~~mka~~~~~~g~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~----~~~P~v~GhE~~G~V~~   76 (373)
T 1p0f_A            4 AGKDITCKAAVAWEPHKP--LSLE-TITVAPPKAHEVRIKILASGICGSDSSVLKEIIP----SKFPVILGHEAVGVVES   76 (373)
T ss_dssp             TTSCEEEEEEEBSSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC----CCSSBCCCCCEEEEEEE
T ss_pred             cCCcceeEEEEEEcCCCC--eeEE-EeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC----CCCCcccCcCceEEEEE
Confidence            346778999999987644  7888 8999999999999999999999999999998432    45799999999999999


Q ss_pred             ecCCCCCCCCCCEEEEecCC--------------------------C------------------CCCCcceeEEEecCC
Q 021831          103 VGASVRSLTVGQEVFGALHP--------------------------T------------------AVRGTYADYAVLSED  138 (307)
Q Consensus       103 ~G~~v~~~~~Gd~V~~~~~~--------------------------~------------------~~~g~~~~~~~~~~~  138 (307)
                      +|++|++|++||||++....                          .                  ..+|+|+||++++.+
T Consensus        77 vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~  156 (373)
T 1p0f_A           77 IGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADI  156 (373)
T ss_dssp             ECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETT
T ss_pred             ECCCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchh
Confidence            99999999999999876421                          0                  024899999999999


Q ss_pred             ceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeC-CccHHHHHH
Q 021831          139 ELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCG-SKSIDRVLA  216 (307)
Q Consensus       139 ~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~-~~~~~~~~~  216 (307)
                      .++++|++++++ ++.++.++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.+ .++.+.+++
T Consensus       157 ~~~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~  234 (373)
T 1p0f_A          157 AVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE  234 (373)
T ss_dssp             SEEEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred             hEEECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence            999999999999 99999999999999877889999999999995 9999999999999999 8999864 566788999


Q ss_pred             cCCceEEeCCC--hhHHHHhc----CCccEEEECCCChhhHHHHHhcccCC-cEEEEeccCc
Q 021831          217 AGAEQAVDYSS--KDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGET  271 (307)
Q Consensus       217 ~g~~~v~~~~~--~~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~  271 (307)
                      +|+++++++.+  .++.+.+.    +++|+|||++|+...+..++++++++ |+++.+|...
T Consensus       235 lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~  296 (373)
T 1p0f_A          235 LGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLAS  296 (373)
T ss_dssp             TTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCC
T ss_pred             cCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCC
Confidence            99999999874  34555443    48999999999976889999999999 9999999654

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.3e-42  Score=314.77  Aligned_cols=239  Identities=31%  Similarity=0.513  Sum_probs=212.0

Q ss_pred             cccceeEEEEcccCCCceeEE-cCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEe
Q 021831           25 VTTSCRAVVLPRFGGPEVLEV-RPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAV  103 (307)
Q Consensus        25 ~~~~~ka~~~~~~~~~~~~~~-~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~  103 (307)
                      +|.+||++++++++.++.+++ + +.+.|+|+++||+|||.++|||++|++++.|.+..  ...+|.++|||++|+|+++
T Consensus        26 ~~~~Mka~~~~~~g~~~~l~~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~P~v~G~E~~G~V~~v  102 (351)
T 1yb5_A           26 GQKLMRAVRVFEFGGPEVLKLRS-DIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR--KPLLPYTPGSDVAGVIEAV  102 (351)
T ss_dssp             --CEEEEEEESSCSSGGGEEEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSC--CCCSSBCCCSCEEEEEEEE
T ss_pred             CcceEEEEEEccCCCcceeEEee-ecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCCcCCceeEEEEEEE
Confidence            456799999999888888998 7 89999999999999999999999999999884321  2457899999999999999


Q ss_pred             cCCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcC
Q 021831          104 GASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGG  183 (307)
Q Consensus       104 G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga  183 (307)
                      |+++++|++||||++...   .+|+|+||+.++.+.++++|++++++++++++.++.|||+++.+.+++++|++|||+|+
T Consensus       103 G~~v~~~~vGdrV~~~~~---~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga  179 (351)
T 1yb5_A          103 GDNASAFKKGDRVFTSST---ISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGA  179 (351)
T ss_dssp             CTTCTTCCTTCEEEESCC---SSCSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETC
T ss_pred             CCCCCCCCCCCEEEEeCC---CCCcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECC
Confidence            999999999999988642   24999999999999999999999999999999999999999987889999999999999


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhc
Q 021831          184 GGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNF  257 (307)
Q Consensus       184 ~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~  257 (307)
                      +|++|++++|+++..|++|+++.+++ +.+.++++|+++++++++.++.+.+.     +++|++||++|+. .+..++++
T Consensus       180 sggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G~~-~~~~~~~~  258 (351)
T 1yb5_A          180 SGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANV-NLSKDLSL  258 (351)
T ss_dssp             SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCHHH-HHHHHHHH
T ss_pred             CChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEECCChH-HHHHHHHh
Confidence            99999999999999999999987654 45678899999999998776655543     3799999999987 78899999


Q ss_pred             ccCCcEEEEeccC
Q 021831          258 LKRGGHYMTLHGE  270 (307)
Q Consensus       258 l~~~G~~v~~g~~  270 (307)
                      ++++|+++.+|..
T Consensus       259 l~~~G~iv~~g~~  271 (351)
T 1yb5_A          259 LSHGGRVIVVGSR  271 (351)
T ss_dssp             EEEEEEEEECCCC
T ss_pred             ccCCCEEEEEecC
Confidence            9999999999965

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=7.7e-42  Score=310.73  Aligned_cols=237  Identities=24%  Similarity=0.310  Sum_probs=207.7

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++++++++++  ++++ +.+.|+|++|||+|||.++|||++|++++.|.... .+..+|.++|||++|+|+++|++|+
T Consensus         1 MkA~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~p~i~G~e~~G~V~~vG~~v~   76 (345)
T 3jv7_A            1 MKAVQYTEIGSE--PVVV-DIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQ-YAYGLPLTLGHEGVGTVAELGEGVT   76 (345)
T ss_dssp             CEEEEECSTTSC--CEEE-ECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTT-CCSCSSEECCSEEEEEEEEECTTCC
T ss_pred             CeEEEEcCCCCc--eEEE-EecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCc-cCCCCCcccCcccEEEEEEECCCCC
Confidence            899999988765  8888 99999999999999999999999999999985432 2357899999999999999999999


Q ss_pred             CCCCCCEEEEecC----------------------------CCCCCCcceeEEEec-CCceeeCCCCCChhhhccccchH
Q 021831          109 SLTVGQEVFGALH----------------------------PTAVRGTYADYAVLS-EDELTPKPVSVTHADASAIPFAA  159 (307)
Q Consensus       109 ~~~~Gd~V~~~~~----------------------------~~~~~g~~~~~~~~~-~~~~~~ip~~~~~~~aa~~~~~~  159 (307)
                      +|++||||++...                            +...+|+|+||+.++ .+.++++|+ +++++++.++.++
T Consensus        77 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~  155 (345)
T 3jv7_A           77 GFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAG  155 (345)
T ss_dssp             SCCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGTTT
T ss_pred             CCCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhhhH
Confidence            9999999988532                            122469999999999 899999999 9999999999999


Q ss_pred             HHHHHHHHH-HcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc-
Q 021831          160 LTAWRALKC-AARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK-  235 (307)
Q Consensus       160 ~ta~~~l~~-~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~-  235 (307)
                      .|||+++.. ...+++|++|||+|+ |++|++++|+|+.+ |++|+++.++ ++.+.++++|+++++++++ ++.+.+. 
T Consensus       156 ~ta~~~l~~~~~~~~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~~v~~  233 (345)
T 3jv7_A          156 LTPYHAISRVLPLLGPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA-GAADAIRE  233 (345)
T ss_dssp             HHHHHHHHTTGGGCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECST-THHHHHHH
T ss_pred             HHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC-cHHHHHHH
Confidence            999999986 458999999999997 99999999999999 5699999554 5667899999999999876 5544443 


Q ss_pred             ---C-CccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          236 ---G-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       236 ---~-~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                         + ++|+|||++|+...+..++++|+++|+++.+|....
T Consensus       234 ~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~  274 (345)
T 3jv7_A          234 LTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAG  274 (345)
T ss_dssp             HHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTT
T ss_pred             HhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCC
Confidence               3 899999999998789999999999999999997653

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=4.5e-42  Score=315.76  Aligned_cols=240  Identities=23%  Similarity=0.337  Sum_probs=208.9

Q ss_pred             cccccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEE
Q 021831           23 FLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAA  102 (307)
Q Consensus        23 ~~~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~  102 (307)
                      .+.|++||++++..++.+  ++++ +.+.|+|+++||+|||.++|||++|++++.|.    ....+|.++|||++|+|++
T Consensus         3 ~~~p~~mka~~~~~~g~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~----~~~~~P~v~GhE~~G~V~~   75 (376)
T 1e3i_A            3 QGKVIKCKAAIAWKTGSP--LCIE-EIEVSPPKACEVRIQVIATCVCPTDINATDPK----KKALFPVVLGHECAGIVES   75 (376)
T ss_dssp             TTSCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHTTCTT----SCCCSSBCCCCEEEEEEEE
T ss_pred             CCCChheeEEEEecCCCC--eEEE-EeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC----CCCCCCcccCccccEEEEE
Confidence            345778999999987644  7888 89999999999999999999999999998884    2246799999999999999


Q ss_pred             ecCCCCCCCCCCEEEEecCC------------------------------C------------------CCCCcceeEEE
Q 021831          103 VGASVRSLTVGQEVFGALHP------------------------------T------------------AVRGTYADYAV  134 (307)
Q Consensus       103 ~G~~v~~~~~Gd~V~~~~~~------------------------------~------------------~~~g~~~~~~~  134 (307)
                      +|++|++|++||||++....                              .                  ..+|+|+||+.
T Consensus        76 vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~  155 (376)
T 1e3i_A           76 VGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTV  155 (376)
T ss_dssp             ECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEE
T ss_pred             ECCCCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEE
Confidence            99999999999999875310                              0                  01389999999


Q ss_pred             ecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeC-CccHH
Q 021831          135 LSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCG-SKSID  212 (307)
Q Consensus       135 ~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~-~~~~~  212 (307)
                      ++.+.++++|+++++++++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++.+ .++.+
T Consensus       156 v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~  234 (376)
T 1e3i_A          156 VSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFP  234 (376)
T ss_dssp             EEGGGEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH
T ss_pred             eccccEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            9999999999999999999999999999999877889999999999995 9999999999999999 8999864 55677


Q ss_pred             HHHHcCCceEEeCCC--hhHHHHhc----CCccEEEECCCChhhHHHHHhcccCC-cEEEEeccC
Q 021831          213 RVLAAGAEQAVDYSS--KDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGE  270 (307)
Q Consensus       213 ~~~~~g~~~v~~~~~--~~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~-G~~v~~g~~  270 (307)
                      .++++|+++++++++  .++.+.+.    +++|+|||++|+...+..++++++++ |+++.+|..
T Consensus       235 ~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~  299 (376)
T 1e3i_A          235 KAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAK  299 (376)
T ss_dssp             HHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCS
T ss_pred             HHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCC
Confidence            899999999999874  44555443    58999999999976889999999999 999999974

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.3e-42  Score=313.42  Aligned_cols=240  Identities=22%  Similarity=0.298  Sum_probs=202.8

Q ss_pred             cccceeEEEEcccCCCceeEEcCcccCCC-CCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEe
Q 021831           25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPD-LKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAV  103 (307)
Q Consensus        25 ~~~~~ka~~~~~~~~~~~~~~~~~~~~p~-~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~  103 (307)
                      .|++||+++++.++.+  ++++ +.|.|+ |++|||+|||.++|||++|++++.|.........+|.++|||++|+|+++
T Consensus        12 ~~~~mka~~~~~~g~~--l~~~-~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~v   88 (359)
T 1h2b_A           12 GVERLKAARLHEYNKP--LRIE-DVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEV   88 (359)
T ss_dssp             -----CEEEESSTTSC--CEEE-CCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEE
T ss_pred             ChhhceEEEEecCCCC--cEEE-EccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEE
Confidence            4678999999987643  7888 899999 99999999999999999999999984321012367999999999999999


Q ss_pred             cCCCCCCCCCCEEEEecCC-----------------------CCCCCcceeEEEecCCceeeCCCCCChhhhc---cccc
Q 021831          104 GASVRSLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADAS---AIPF  157 (307)
Q Consensus       104 G~~v~~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa---~~~~  157 (307)
                      |++|++|++||||++....                       ...+|+|+||+.+|.+.++++|+++++++++   .+.+
T Consensus        89 G~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l~~  168 (359)
T 1h2b_A           89 AEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLAD  168 (359)
T ss_dssp             CTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCHHHHHHTGGGGT
T ss_pred             CCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHhEEECCCCCCHHHHhhccchhh
Confidence            9999999999999876421                       1146999999999999999999999999998   7888


Q ss_pred             hHHHHHHHHHHH-cCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHh
Q 021831          158 AALTAWRALKCA-ARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAI  234 (307)
Q Consensus       158 ~~~ta~~~l~~~-~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~  234 (307)
                      +++|||+++... .++++|++|||+|+ |++|++++|+|+.+ |++|+++.++ ++.+.++++|+++++|+++. +.+.+
T Consensus       169 ~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~-~~~~v  246 (359)
T 1h2b_A          169 AGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRD-PVKQV  246 (359)
T ss_dssp             HHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSC-HHHHH
T ss_pred             hHHHHHHHHHhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCEEEeccch-HHHHH
Confidence            899999999865 89999999999998 99999999999999 9999999765 55677899999999999876 44433


Q ss_pred             c----C-CccEEEECCCChh--hHHHHHhcccCCcEEEEeccCc
Q 021831          235 K----G-KFDAVLDTIGAPE--TERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       235 ~----~-~~dvvid~~g~~~--~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .    + ++|+|||++|+..  .+..++++  ++|+++.+|...
T Consensus       247 ~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~  288 (359)
T 1h2b_A          247 MELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGG  288 (359)
T ss_dssp             HHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSS
T ss_pred             HHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCC
Confidence            2    3 7999999999986  77888887  999999999754

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=5.7e-42  Score=314.75  Aligned_cols=240  Identities=23%  Similarity=0.322  Sum_probs=208.9

Q ss_pred             cccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEec
Q 021831           25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG  104 (307)
Q Consensus        25 ~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G  104 (307)
                      +|++||++++.+++.+  ++++ +.+.|+|+++||+|||.++|||++|++++.|...   ...+|.++|||++|+|+++|
T Consensus         3 ~p~~mkA~~~~~~~~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~P~v~GhE~~G~V~~vG   76 (373)
T 2fzw_A            3 EVIKCKAAVAWEAGKP--LSIE-EIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP---EGCFPVILGHLGAGIVESVG   76 (373)
T ss_dssp             CCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCT---TCCSSBCCCCEEEEEEEEEC
T ss_pred             CccceEEEEEecCCCC--cEEE-EeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCC---CCCCCccccccccEEEEEEC
Confidence            4678999999987644  7888 8999999999999999999999999999998432   23579999999999999999


Q ss_pred             CCCCCCCCCCEEEEecCC--------------------------C------------------CCCCcceeEEEecCCce
Q 021831          105 ASVRSLTVGQEVFGALHP--------------------------T------------------AVRGTYADYAVLSEDEL  140 (307)
Q Consensus       105 ~~v~~~~~Gd~V~~~~~~--------------------------~------------------~~~g~~~~~~~~~~~~~  140 (307)
                      ++|++|++||||++....                          .                  ..+|+|+||++++.+.+
T Consensus        77 ~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~  156 (373)
T 2fzw_A           77 EGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISV  156 (373)
T ss_dssp             TTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred             CCCCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhhe
Confidence            999999999999876321                          0                  02489999999999999


Q ss_pred             eeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeC-CccHHHHHHcC
Q 021831          141 TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCG-SKSIDRVLAAG  218 (307)
Q Consensus       141 ~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~-~~~~~~~~~~g  218 (307)
                      +++|+++++++++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++.+ .++.+.++++|
T Consensus       157 ~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lG  235 (373)
T 2fzw_A          157 AKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFG  235 (373)
T ss_dssp             EECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHT
T ss_pred             EECCCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcC
Confidence            9999999999999999999999999877889999999999995 9999999999999999 8999864 55677889999


Q ss_pred             CceEEeCCC--hhHHHHhc----CCccEEEECCCChhhHHHHHhcccCC-cEEEEeccCc
Q 021831          219 AEQAVDYSS--KDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGET  271 (307)
Q Consensus       219 ~~~v~~~~~--~~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~  271 (307)
                      +++++++++  .++.+.+.    +++|+|||++|+...+..++++++++ |+++.+|...
T Consensus       236 a~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~  295 (373)
T 2fzw_A          236 ATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAA  295 (373)
T ss_dssp             CSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCC
T ss_pred             CceEeccccccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCC
Confidence            999999874  34554443    48999999999976889999999999 9999999654

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.6e-42  Score=315.85  Aligned_cols=238  Identities=23%  Similarity=0.300  Sum_probs=208.3

Q ss_pred             ccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecC
Q 021831           26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (307)
Q Consensus        26 ~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~  105 (307)
                      +++||++++++++.+  ++++ +.+.|+|+++||+|||.++|||++|++++.|..    +..+|.++|||++|+|+++|+
T Consensus         4 ~~~mka~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~----~~~~P~v~GhE~~G~V~~vG~   76 (371)
T 1f8f_A            4 LKDIIAAVTPCKGAD--FELQ-ALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKY----PVPLPAVLGHEGSGIIEAIGP   76 (371)
T ss_dssp             CEEEEEEEBCSTTCC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHTTSS----CCCSSBCCCCEEEEEEEEECT
T ss_pred             cccceEEEEcCCCCC--eEEE-EecCCCCCCCEEEEEEEEeecCchhHHHHcCCC----CCCCCcccCcccceEEEEeCC
Confidence            346999999987654  7888 899999999999999999999999999999842    245799999999999999999


Q ss_pred             CCCCCCCCCEEEEec------------------------C---------------C------CCCCCcceeEEEecCCce
Q 021831          106 SVRSLTVGQEVFGAL------------------------H---------------P------TAVRGTYADYAVLSEDEL  140 (307)
Q Consensus       106 ~v~~~~~Gd~V~~~~------------------------~---------------~------~~~~g~~~~~~~~~~~~~  140 (307)
                      +|++|++||||++.+                        .               +      ...+|+|+||+.++.+.+
T Consensus        77 ~v~~~~~GdrV~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~  156 (371)
T 1f8f_A           77 NVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNT  156 (371)
T ss_dssp             TCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGE
T ss_pred             CCCCCCCCCEEEecCCCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhhe
Confidence            999999999998742                        0               0      012489999999999999


Q ss_pred             eeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcC
Q 021831          141 TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAG  218 (307)
Q Consensus       141 ~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g  218 (307)
                      +++|+++++++++.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.++ ++.+.++++|
T Consensus       157 ~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lG  235 (371)
T 1f8f_A          157 VKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLG  235 (371)
T ss_dssp             EEECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHT
T ss_pred             EECCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcC
Confidence            9999999999999999999999999977889999999999995 9999999999999999 78888654 5567789999


Q ss_pred             CceEEeCCChhHHHHhc----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          219 AEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       219 ~~~v~~~~~~~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +++++++.+.++.+.+.    +++|+|||++|+...+..++++|+++|+++.+|...
T Consensus       236 a~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~  292 (371)
T 1f8f_A          236 ATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQ  292 (371)
T ss_dssp             CSEEEETTTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCS
T ss_pred             CCEEecCCccCHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCC
Confidence            99999998777655543    479999999999768899999999999999999764

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=1.8e-42  Score=315.44  Aligned_cols=241  Identities=20%  Similarity=0.272  Sum_probs=209.2

Q ss_pred             ccccceeEEEEc--cc-CCCceeEEcCcc---------cCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcc
Q 021831           24 LVTTSCRAVVLP--RF-GGPEVLEVRPNV---------EVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLI   91 (307)
Q Consensus        24 ~~~~~~ka~~~~--~~-~~~~~~~~~~~~---------~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~   91 (307)
                      .||.+||+++++  ++ +.++.++++ +.         +.|+|++|||+|||.++|||++|++++.|...  ....+|.+
T Consensus         6 ~~p~~mka~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~--~~~~~p~v   82 (349)
T 3pi7_A            6 TIPSEMKALLLVGDGYTKTPSGSALE-AMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYG--QPRVKGRP   82 (349)
T ss_dssp             CCCSEEEEEEECSCBSCSSCCCSCCC-CSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSS--SCBCTTSB
T ss_pred             CCchhheEEEEEccccCCCcccceEE-EeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCC--CCCCCCCC
Confidence            478899999999  66 456778888 88         99999999999999999999999999998532  23468999


Q ss_pred             cccceEEEEEEecCCC-CCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHc
Q 021831           92 LGRDISGEVAAVGASV-RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAA  170 (307)
Q Consensus        92 ~G~e~~G~V~~~G~~v-~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~  170 (307)
                      +|||++|+|+++|++| ++|++||||++... ...+|+|+||+.++.+.++++|+++++++++.+++.++|||++++ .+
T Consensus        83 ~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~g-~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~-~~  160 (349)
T 3pi7_A           83 AGFEGVGTIVAGGDEPYAKSLVGKRVAFATG-LSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMFD-IV  160 (349)
T ss_dssp             CCSEEEEEEEEECSSHHHHHHTTCEEEEECT-TSSCCSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHHHH-HH
T ss_pred             ccceEEEEEEEECCCccCCCCCCCEEEEecc-CCCCccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHHHHH-HH
Confidence            9999999999999999 99999999998752 234599999999999999999999999999999999999997765 55


Q ss_pred             CCCCC-CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CccHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEE
Q 021831          171 RMSEG-QRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLD  243 (307)
Q Consensus       171 ~~~~g-~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid  243 (307)
                      + ++| ++|||+||+|++|++++|+|+.+|++|+++.+ .++.+.++++|+++++++++.++.+.+.     .++|++||
T Consensus       161 ~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid  239 (349)
T 3pi7_A          161 K-QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLD  239 (349)
T ss_dssp             H-HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEE
T ss_pred             h-hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEE
Confidence            5 666 79999999999999999999999999999975 4567788999999999998877776654     37999999


Q ss_pred             CCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          244 TIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       244 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      |+|+. ....++++++++|+++.+|...
T Consensus       240 ~~g~~-~~~~~~~~l~~~G~iv~~G~~~  266 (349)
T 3pi7_A          240 AVTGP-LASAIFNAMPKRARWIIYGRLD  266 (349)
T ss_dssp             SSCHH-HHHHHHHHSCTTCEEEECCCSC
T ss_pred             CCCCh-hHHHHHhhhcCCCEEEEEeccC
Confidence            99998 6688999999999999999643

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=9.9e-42  Score=313.27  Aligned_cols=239  Identities=22%  Similarity=0.297  Sum_probs=208.4

Q ss_pred             cccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHH-HHhCCCccccCCCCCcccccceEEEEEEe
Q 021831           25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTR-MRSGYGRSIFEPLLPLILGRDISGEVAAV  103 (307)
Q Consensus        25 ~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~-~~~g~~~~~~~~~~p~~~G~e~~G~V~~~  103 (307)
                      .|++||++++.+++.+  ++++ +.+.|+|+++||+|||.++|||++|++ ++.|...    ..+|.++|||++|+|+++
T Consensus         5 ~~~~mka~~~~~~~~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~----~~~P~v~GhE~~G~V~~v   77 (374)
T 1cdo_A            5 KVIKCKAAVAWEANKP--LVIE-EIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK----DGFPVVLGHEGAGIVESV   77 (374)
T ss_dssp             SCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT----TSCSEECCCCEEEEEEEE
T ss_pred             CcceeEEEEEecCCCC--eEEE-EeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC----CCCCcccCccceEEEEEE
Confidence            4568999999987654  7888 899999999999999999999999999 8888432    467999999999999999


Q ss_pred             cCCCCCCCCCCEEEEecCC--------------------------C------------------CCCCcceeEEEecCCc
Q 021831          104 GASVRSLTVGQEVFGALHP--------------------------T------------------AVRGTYADYAVLSEDE  139 (307)
Q Consensus       104 G~~v~~~~~Gd~V~~~~~~--------------------------~------------------~~~g~~~~~~~~~~~~  139 (307)
                      |++|++|++||||++....                          .                  ..+|+|+||+.+|.+.
T Consensus        78 G~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~  157 (374)
T 1cdo_A           78 GPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIA  157 (374)
T ss_dssp             CTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGG
T ss_pred             CCCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhh
Confidence            9999999999999876321                          0                  0148999999999999


Q ss_pred             eeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeC-CccHHHHHHc
Q 021831          140 LTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCG-SKSIDRVLAA  217 (307)
Q Consensus       140 ~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~-~~~~~~~~~~  217 (307)
                      ++++|+++++++++.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.+ .++.+.++++
T Consensus       158 ~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l  236 (374)
T 1cdo_A          158 VAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF  236 (374)
T ss_dssp             EEECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT
T ss_pred             eEECCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh
Confidence            99999999999999999999999999877889999999999995 9999999999999999 8999864 5567789999


Q ss_pred             CCceEEeCCC--hhHHHHhc----CCccEEEECCCChhhHHHHHhcccCC-cEEEEeccCc
Q 021831          218 GAEQAVDYSS--KDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGET  271 (307)
Q Consensus       218 g~~~v~~~~~--~~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~  271 (307)
                      |+++++++++  .++.+.+.    +++|++||++|+...+..++++++++ |+++.+|...
T Consensus       237 Ga~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~  297 (374)
T 1cdo_A          237 GATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTD  297 (374)
T ss_dssp             TCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCS
T ss_pred             CCceEEeccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCC
Confidence            9999998874  34554443    58999999999876889999999999 9999999764

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=1e-41  Score=313.18  Aligned_cols=238  Identities=23%  Similarity=0.327  Sum_probs=207.4

Q ss_pred             ccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecC
Q 021831           26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (307)
Q Consensus        26 ~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~  105 (307)
                      |++||+++++.++.+  ++++ +.+.|+|+++||+|||.++|||++|++++.|...    ..+|.++|||++|+|+++|+
T Consensus         6 ~~~mkA~~~~~~g~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~----~~~P~v~GhE~~G~V~~vG~   78 (374)
T 2jhf_A            6 VIKCKAAVLWEEKKP--FSIE-EVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV----TPLPVIAGHEAAGIVESIGE   78 (374)
T ss_dssp             CEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSC----CCSSBCCCCSEEEEEEEECT
T ss_pred             ceeEEEEEEecCCCc--eEEE-EccCCCCCCCeEEEEEeEEeechhhHHHHcCCCC----CCCCcccCcCceEEEEEECC
Confidence            567999999987654  7888 8999999999999999999999999999998432    23799999999999999999


Q ss_pred             CCCCCCCCCEEEEecCC--------------------------C------------------CCCCcceeEEEecCCcee
Q 021831          106 SVRSLTVGQEVFGALHP--------------------------T------------------AVRGTYADYAVLSEDELT  141 (307)
Q Consensus       106 ~v~~~~~Gd~V~~~~~~--------------------------~------------------~~~g~~~~~~~~~~~~~~  141 (307)
                      +|++|++||||++....                          .                  ..+|+|+||+.++.+.++
T Consensus        79 ~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~  158 (374)
T 2jhf_A           79 GVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVA  158 (374)
T ss_dssp             TCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEE
T ss_pred             CCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHeE
Confidence            99999999999876320                          0                  024899999999999999


Q ss_pred             eCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeC-CccHHHHHHcCC
Q 021831          142 PKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCG-SKSIDRVLAAGA  219 (307)
Q Consensus       142 ~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~-~~~~~~~~~~g~  219 (307)
                      ++|+++++++++.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.+ .++.+.++++|+
T Consensus       159 ~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa  237 (374)
T 2jhf_A          159 KIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA  237 (374)
T ss_dssp             ECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC
T ss_pred             ECCCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC
Confidence            999999999999999999999999877889999999999995 9999999999999999 8999864 556778899999


Q ss_pred             ceEEeCCC--hhHHHHhc----CCccEEEECCCChhhHHHHHhcccCC-cEEEEeccCc
Q 021831          220 EQAVDYSS--KDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGET  271 (307)
Q Consensus       220 ~~v~~~~~--~~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~  271 (307)
                      ++++++++  .++.+.+.    +++|+|||++|+...+..++++++++ |+++.+|...
T Consensus       238 ~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~  296 (374)
T 2jhf_A          238 TECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPP  296 (374)
T ss_dssp             SEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCC
T ss_pred             ceEecccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCC
Confidence            99999874  34554443    47999999999976889999999999 9999999654

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.2e-41  Score=306.08  Aligned_cols=241  Identities=22%  Similarity=0.333  Sum_probs=209.2

Q ss_pred             cccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEec
Q 021831           25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG  104 (307)
Q Consensus        25 ~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G  104 (307)
                      ||++||+++++.++.+  ++++ +.+.|+|+++||+|||.++|||++|++++.|...  ....+|.++|||++|+|+++|
T Consensus         2 ~p~~mka~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~v~G~E~~G~V~~vG   76 (347)
T 2hcy_A            2 IPETQKGVIFYESHGK--LEYK-DIPVPKPKANELLINVKYSGVCHTDLHAWHGDWP--LPVKLPLVGGHEGAGVVVGMG   76 (347)
T ss_dssp             CCSEEEEEEESSTTCC--CEEE-EEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSS--SCCCSSEECCCEEEEEEEEEC
T ss_pred             CCcccEEEEEeCCCCC--CEEE-EeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCC--CCCCCCcccCccceEEEEEEC
Confidence            6788999999987744  8888 8999999999999999999999999999998432  124679999999999999999


Q ss_pred             CCCCCCCCCCEEEEecC------------------------CCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHH
Q 021831          105 ASVRSLTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAAL  160 (307)
Q Consensus       105 ~~v~~~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~  160 (307)
                      ++|++|++||||+....                        +...+|+|+||+.++.+.++++|+++++++++.++.++.
T Consensus        77 ~~v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~  156 (347)
T 2hcy_A           77 ENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGI  156 (347)
T ss_dssp             TTCCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHHH
T ss_pred             CCCCCCcCCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEeccccEEECCCCCCHHHHHHHhhhHH
Confidence            99999999999986321                        112469999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCC-ChhHHHHhc---
Q 021831          161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYS-SKDIELAIK---  235 (307)
Q Consensus       161 ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~-~~~~~~~~~---  235 (307)
                      |||+++. ..++++|++|||+|++|++|++++++++..|++|+++.++ ++.+.++++|+++++|+. ..++.+.+.   
T Consensus       157 ta~~~l~-~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~  235 (347)
T 2hcy_A          157 TVYKALK-SANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKAT  235 (347)
T ss_dssp             HHHHHHH-TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHH
T ss_pred             HHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHh
Confidence            9999997 4589999999999999999999999999999999998754 455678889999999977 345544433   


Q ss_pred             -CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          236 -GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       236 -~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                       +++|++||++|....+..++++|+++|+++.+|...
T Consensus       236 ~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~  272 (347)
T 2hcy_A          236 DGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPA  272 (347)
T ss_dssp             TSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCT
T ss_pred             CCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCC
Confidence             479999999998668999999999999999999765

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=3.9e-42  Score=314.76  Aligned_cols=242  Identities=18%  Similarity=0.154  Sum_probs=202.6

Q ss_pred             cccccccceeEEEEcccCCCceeEEcCcccCC--------CCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCccc
Q 021831           21 VRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVP--------DLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLIL   92 (307)
Q Consensus        21 ~~~~~~~~~ka~~~~~~~~~~~~~~~~~~~~p--------~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~   92 (307)
                      |..+++++||+++++.   ++.++++ +.+.|        +|+++||+|||.++|||++|++++.+.........+|.++
T Consensus         1 m~~~~~~~mka~~~~~---~~~l~~~-~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~   76 (363)
T 3m6i_A            1 MASSASKTNIGVFTNP---QHDLWIS-EASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVL   76 (363)
T ss_dssp             ----CCSCCEEEEECT---TCCEEEE-ECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEEC
T ss_pred             CCCCCcccceeEEEeC---CCcEEEE-EecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCccc
Confidence            4556889999999994   5568999 99999        9999999999999999999999887432222335679999


Q ss_pred             ccceEEEEEEecCCCCCCCCCCEEEEecCC------------------------CCCCCcceeEEEecCCceeeCCCCCC
Q 021831           93 GRDISGEVAAVGASVRSLTVGQEVFGALHP------------------------TAVRGTYADYAVLSEDELTPKPVSVT  148 (307)
Q Consensus        93 G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~  148 (307)
                      |||++|+|+++|++|++|++||||++.+..                        ...+|+|+||+.+|.+.++++|+ ++
T Consensus        77 G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~-~s  155 (363)
T 3m6i_A           77 GHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-MS  155 (363)
T ss_dssp             CCEEEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTT-CC
T ss_pred             CcceEEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCC-CC
Confidence            999999999999999999999999875311                        12569999999999999999999 99


Q ss_pred             hhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeC-CccHHHHHHcCCceEEeCC
Q 021831          149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCG-SKSIDRVLAAGAEQAVDYS  226 (307)
Q Consensus       149 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~-Vi~~~~-~~~~~~~~~~g~~~v~~~~  226 (307)
                      +++++.+ .++.|||+++ +.+++++|++|||+|+ |++|++++|+|+.+|++ |+++.. .++++.++++ +++++++.
T Consensus       156 ~~~aa~~-~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~  231 (363)
T 3m6i_A          156 YENGAML-EPLSVALAGL-QRAGVRLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHK  231 (363)
T ss_dssp             HHHHHHH-HHHHHHHHHH-HHHTCCTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEE
T ss_pred             HHHHHhh-hHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhccccc
Confidence            9999987 4889999999 5899999999999997 99999999999999996 888854 4566778888 66665543


Q ss_pred             -----ChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          227 -----SKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       227 -----~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                           ..++.+.+.     .++|+|||++|+...+..++++|+++|+++.+|...
T Consensus       232 ~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~  286 (363)
T 3m6i_A          232 VERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGK  286 (363)
T ss_dssp             CCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCC
T ss_pred             ccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCC
Confidence                 245555543     389999999999878899999999999999999754

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=2.4e-41  Score=307.76  Aligned_cols=264  Identities=21%  Similarity=0.250  Sum_probs=219.8

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      |||++++.. .+..++++ |.|+|+|+||||||||.++|||++|+++++|.    ....+|.++|||++|+|+++|++|+
T Consensus         1 MKA~v~~~~-~~~~~~l~-e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~----~~~~~p~i~GhE~aG~V~~vG~~V~   74 (348)
T 4eez_A            1 MKAAVVRHN-PDGYADLV-EKELRAIKPNEALLDMEYCGVCHTDLHVAAGD----FGNKAGTVLGHEGIGIVKEIGADVS   74 (348)
T ss_dssp             CEEEEECSS-CCSSEEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHTTT----TCCCTTCBCCSEEEEEEEEECTTCC
T ss_pred             CeEEEEEcC-CCCcEEEE-EeECCCCCCCEEEEEEEEEEECHHHHHHhcCC----CCCCCCcccceeEEEEEEEECceee
Confidence            899998743 33568888 99999999999999999999999999999984    3456899999999999999999999


Q ss_pred             CCCCCCEEEEecC------------------------CCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHH
Q 021831          109 SLTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (307)
Q Consensus       109 ~~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (307)
                      +|++||||+....                        ....+|+|+||+.++.+.++++|++++++++++++.+++|+|+
T Consensus        75 ~~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~  154 (348)
T 4eez_A           75 SLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYK  154 (348)
T ss_dssp             SCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHH
T ss_pred             ecccCCeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEe
Confidence            9999999976432                        1235699999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhc-----CC
Q 021831          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIK-----GK  237 (307)
Q Consensus       165 ~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~  237 (307)
                      +++ ...+++|++|||+|+ |++|++++++++.. |++|+++.+++ +.+.++++|+++++|+++.++.+.+.     .+
T Consensus       155 ~l~-~~~~~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g  232 (348)
T 4eez_A          155 AIK-VSGVKPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLG  232 (348)
T ss_dssp             HHH-HHTCCTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSC
T ss_pred             eec-ccCCCCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCC
Confidence            996 788999999999996 88999999999876 56999997654 56778999999999999888776654     37


Q ss_pred             ccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc-----------cccccccceechhHHHHHHHHHHHhhhh
Q 021831          238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA-----------ALADHYGLALGLPIATTVLLKKRMQTWY  300 (307)
Q Consensus       238 ~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (307)
                      +|.++|++++...+..++.+++++|+++.+|.+..           +.....+...+.......+++....+.+
T Consensus       233 ~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~~~l~~~g~i  306 (348)
T 4eez_A          233 VQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGKV  306 (348)
T ss_dssp             EEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEEEECHHHHHHSCCEEEECCSCCHHHHHHHHHHHHTTSC
T ss_pred             ceEEEEeccCcchhheeheeecCCceEEEEeccCCCCccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHcCCC
Confidence            99999999999899999999999999999998754           2233344444455555555555544443

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.9e-41  Score=309.50  Aligned_cols=237  Identities=23%  Similarity=0.268  Sum_probs=206.1

Q ss_pred             cceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCC
Q 021831           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (307)
Q Consensus        27 ~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~  106 (307)
                      ++||++.+..++  +.++++ +.|.|+|+++||+|||.++|||++|++++.|...   ...+|.++|||++|+|+++|++
T Consensus        21 ~~~~a~~~~~~~--~~l~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~P~v~GhE~~G~V~~vG~~   94 (369)
T 1uuf_A           21 LKIKAVGAYSAK--QPLEPM-DITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWA---GTVYPCVPGHEIVGRVVAVGDQ   94 (369)
T ss_dssp             --CEEEEBSSTT--SCCEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTS---CCCSSBCCCCCEEEEEEEECTT
T ss_pred             ceEEEEEEcCCC--CCcEEE-EecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCC---CCCCCeecccCceEEEEEECCC
Confidence            469999987543  458888 9999999999999999999999999999988432   2357999999999999999999


Q ss_pred             CCCCCCCCEEEEecC--------------------------------CCCCCCcceeEEEecCCceeeCCCC-CChhhhc
Q 021831          107 VRSLTVGQEVFGALH--------------------------------PTAVRGTYADYAVLSEDELTPKPVS-VTHADAS  153 (307)
Q Consensus       107 v~~~~~Gd~V~~~~~--------------------------------~~~~~g~~~~~~~~~~~~~~~ip~~-~~~~~aa  153 (307)
                      |++|++||||++.+.                                +...+|+|+||+.+|.+.++++|++ +++++++
T Consensus        95 V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa  174 (369)
T 1uuf_A           95 VEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVA  174 (369)
T ss_dssp             CCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHG
T ss_pred             CCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHhh
Confidence            999999999986321                                1124599999999999999999999 9999999


Q ss_pred             cccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CccHHHHHHcCCceEEeCCChhHHH
Q 021831          154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSIDRVLAAGAEQAVDYSSKDIEL  232 (307)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~  232 (307)
                      .++.++.|||+++. ..++++|++|||+|+ |++|++++|+|+.+|++|+++.+ .++.+.++++|+++++++.+.++.+
T Consensus       175 ~l~~~~~tA~~al~-~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~  252 (369)
T 1uuf_A          175 PLLCAGITTYSPLR-HWQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMA  252 (369)
T ss_dssp             GGGTHHHHHHHHHH-HTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHH
T ss_pred             hhhhhHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHH
Confidence            99999999999998 468999999999997 89999999999999999998865 5567788999999999998877666


Q ss_pred             HhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       233 ~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .+.+++|+|||++|+...+..++++++++|+++.+|...
T Consensus       253 ~~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~  291 (369)
T 1uuf_A          253 AHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPA  291 (369)
T ss_dssp             TTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-
T ss_pred             HhhcCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCC
Confidence            655789999999998767899999999999999999764

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=5.2e-41  Score=304.54  Aligned_cols=237  Identities=29%  Similarity=0.393  Sum_probs=206.5

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||+++++.++.+  ++++ +.+.|+|+++||+|||.++|||++|++.+.|...  ....+|.++|||++|+|+++|++|+
T Consensus         1 Mka~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~v~GhE~~G~V~~vG~~v~   75 (339)
T 1rjw_A            1 MKAAVVEQFKEP--LKIK-EVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWP--VKPKLPLIPGHEGVGIVEEVGPGVT   75 (339)
T ss_dssp             CEEEEBSSTTSC--CEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSS--SCCCSSBCCCSCEEEEEEEECTTCC
T ss_pred             CeEEEEcCCCCC--cEEE-EeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCC--cCCCCCeeccccceEEEEEECCCCC
Confidence            799999987744  7888 8999999999999999999999999999998432  1245799999999999999999999


Q ss_pred             CCCCCCEEEEecC------------------------CCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHH
Q 021831          109 SLTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (307)
Q Consensus       109 ~~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (307)
                      +|++||||+....                        +...+|+|+||+.++.+.++++|+++++++++.++.++.|||+
T Consensus        76 ~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~  155 (339)
T 1rjw_A           76 HLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYK  155 (339)
T ss_dssp             SCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHH
T ss_pred             cCCCCCEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHH
Confidence            9999999986321                        1124699999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc---CCccE
Q 021831          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK---GKFDA  240 (307)
Q Consensus       165 ~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~---~~~dv  240 (307)
                      ++.. .++++|++|||+|+ |++|++++|+++.+|++|+++.++ ++.+.++++|+++++++.+.++.+.+.   +++|+
T Consensus       156 ~l~~-~~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~  233 (339)
T 1rjw_A          156 ALKV-TGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHA  233 (339)
T ss_dssp             HHHH-HTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEE
T ss_pred             HHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCE
Confidence            9974 48999999999998 889999999999999999999755 456778899999999988766555443   68999


Q ss_pred             EEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          241 VLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       241 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      +||++|....+..++++++++|+++.+|....
T Consensus       234 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  265 (339)
T 1rjw_A          234 AVVTAVSKPAFQSAYNSIRRGGACVLVGLPPE  265 (339)
T ss_dssp             EEESSCCHHHHHHHHHHEEEEEEEEECCCCSS
T ss_pred             EEECCCCHHHHHHHHHHhhcCCEEEEecccCC
Confidence            99999996689999999999999999997653

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=8e-42  Score=310.96  Aligned_cols=239  Identities=25%  Similarity=0.332  Sum_probs=206.1

Q ss_pred             cccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhC-CCccccCCCCCcccccceEEEEEEe
Q 021831           25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLLPLILGRDISGEVAAV  103 (307)
Q Consensus        25 ~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g-~~~~~~~~~~p~~~G~e~~G~V~~~  103 (307)
                      ||++||+++++.++.  .++++ +.+.|+|+++||+|||.++|||++|++++.| .... ....+|.++|||++|+|+++
T Consensus         1 ~m~~mka~~~~~~g~--~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~~~~~p~v~G~E~~G~V~~v   76 (348)
T 2d8a_A            1 MSEKMVAIMKTKPGY--GAELV-EVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQ-SRIKPPQIMGHEVAGEVVEI   76 (348)
T ss_dssp             --CEEEEEEECSSSS--SCEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHH-HHCCSSEECCCEEEEEEEEE
T ss_pred             CCCcceEEEEECCCC--CEEEE-ECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCc-ccCCCCCccCccceEEEEEE
Confidence            467899999998764  68888 9999999999999999999999999999988 2210 12467899999999999999


Q ss_pred             cCCCCCCCCCCEEEEecCC-----------------------CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHH
Q 021831          104 GASVRSLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAAL  160 (307)
Q Consensus       104 G~~v~~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~  160 (307)
                      |++|++|++||||++....                       ...+|+|+||+++|.+.++++|+++++++++.+. ++.
T Consensus        77 G~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~-~~~  155 (348)
T 2d8a_A           77 GPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQE-PLG  155 (348)
T ss_dssp             CTTCCSCCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHH-HHH
T ss_pred             CCCCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHHeEECCCCCCHHHHHhhh-HHH
Confidence            9999999999999876321                       1246999999999999999999999999998875 888


Q ss_pred             HHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc---
Q 021831          161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK---  235 (307)
Q Consensus       161 ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~---  235 (307)
                      |||+++ ...++ +|++|||+|+ |++|++++|+|+.+|+ +|+++.++ ++.+.++++|++++++++++++.+.+.   
T Consensus       156 ta~~~l-~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~  232 (348)
T 2d8a_A          156 NAVDTV-LAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDIT  232 (348)
T ss_dssp             HHHHHH-TTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHT
T ss_pred             HHHHHH-HhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHc
Confidence            999999 47888 9999999998 9999999999999999 99998765 456778899999999998777665543   


Q ss_pred             -C-CccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          236 -G-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       236 -~-~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                       + ++|+|||++|....+..++++++++|+++.+|...
T Consensus       233 ~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~  270 (348)
T 2d8a_A          233 DGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYP  270 (348)
T ss_dssp             TTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCS
T ss_pred             CCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCC
Confidence             2 79999999999668899999999999999999754

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=6.6e-42  Score=313.31  Aligned_cols=239  Identities=25%  Similarity=0.334  Sum_probs=204.8

Q ss_pred             ccceeEEEEcccCCC-ceeEEcCcccCCCCC--CCeEEEEEeeeecChhhHHHHhCCCccccCCCCC---------cccc
Q 021831           26 TTSCRAVVLPRFGGP-EVLEVRPNVEVPDLK--PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP---------LILG   93 (307)
Q Consensus        26 ~~~~ka~~~~~~~~~-~~~~~~~~~~~p~~~--~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p---------~~~G   93 (307)
                      |++||++++++++.+ +.++++ +.+.|+|.  +|||+|||.++|||++|++++.|....  ...+|         .++|
T Consensus         1 ~~~mka~~~~~~g~~~~~l~~~-~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~P~~~~~~~p~~i~G   77 (364)
T 1gu7_A            1 MITAQAVLYTQHGEPKDVLFTQ-SFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPS--KPAKTTGFGTTEPAAPCG   77 (364)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEE-EEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSC--CCCCBSTTCCSSCBEECC
T ss_pred             CceEEEEEeccCCCchheeEEe-eccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCC--CCCCCccccccCcccccC
Confidence            467999999988765 458888 88888877  999999999999999999999985321  12345         8999


Q ss_pred             cceEEEEEEecCCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCC-----------CCChhhhccccchHHHH
Q 021831           94 RDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPV-----------SVTHADASAIPFAALTA  162 (307)
Q Consensus        94 ~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~-----------~~~~~~aa~~~~~~~ta  162 (307)
                      ||++|+|+++|++|++|++||||++...   .+|+|+||++++.+.++++|+           +++++++++++++++||
T Consensus        78 ~E~~G~V~~vG~~v~~~~vGdrV~~~~~---~~G~~aey~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta  154 (364)
T 1gu7_A           78 NEGLFEVIKVGSNVSSLEAGDWVIPSHV---NFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTA  154 (364)
T ss_dssp             SCCEEEEEEECTTCCSCCTTCEEEESSS---CCCCSBSEEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHH
T ss_pred             ceeEEEEEEeCCCCCcCCCCCEEEecCC---CCCcchheEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHH
Confidence            9999999999999999999999988642   249999999999999999998           89999999999999999


Q ss_pred             HHHHHHHcCCCCC-CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-c----HHHHHHcCCceEEeCCC---hhHHHH
Q 021831          163 WRALKCAARMSEG-QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-S----IDRVLAAGAEQAVDYSS---KDIELA  233 (307)
Q Consensus       163 ~~~l~~~~~~~~g-~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~----~~~~~~~g~~~v~~~~~---~~~~~~  233 (307)
                      |+++....++++| ++|||+|++|++|++++|+|+.+|+++++++++. +    .+.++++|+++++++++   .++.+.
T Consensus       155 ~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~  234 (364)
T 1gu7_A          155 YLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPT  234 (364)
T ss_dssp             HHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHH
T ss_pred             HHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHH
Confidence            9999866789999 9999999999999999999999999998887543 3    45678999999999864   444433


Q ss_pred             h------c-CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          234 I------K-GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       234 ~------~-~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +      . +++|+||||+|+... ..++++++++|+++.+|...
T Consensus       235 i~~~t~~~~~g~Dvvid~~G~~~~-~~~~~~l~~~G~~v~~g~~~  278 (364)
T 1gu7_A          235 IKEWIKQSGGEAKLALNCVGGKSS-TGIARKLNNNGLMLTYGGMS  278 (364)
T ss_dssp             HHHHHHHHTCCEEEEEESSCHHHH-HHHHHTSCTTCEEEECCCCS
T ss_pred             HHHHhhccCCCceEEEECCCchhH-HHHHHHhccCCEEEEecCCC
Confidence            3      2 479999999999844 48899999999999999754

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=9.4e-42  Score=308.69  Aligned_cols=238  Identities=24%  Similarity=0.396  Sum_probs=207.0

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++++++++.++.++++ +.+.|+|+++||+|||.++|||++|++++.|.+.......+|.++|||++|+|+++|++|+
T Consensus         2 Mka~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~   80 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWE-EVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVT   80 (333)
T ss_dssp             CEEEEESSCSSGGGEEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCC
T ss_pred             cEEEEEcccCCcceeEEE-eccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCC
Confidence            899999998888889999 9999999999999999999999999999988431010035789999999999999999999


Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhh--hccccchHHHHHHHHHHHcCCCCCCEEEEEcCCch
Q 021831          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHAD--ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGA  186 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~--aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~  186 (307)
                      +|++||||+....   .+|+|+||+.++.+.++++|+++++++  +++++.+++|||+++.+..++++|++|||+|++|+
T Consensus        81 ~~~~GdrV~~~~~---~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~gg  157 (333)
T 1wly_A           81 DFTVGERVCTCLP---PLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGG  157 (333)
T ss_dssp             SCCTTCEEEECSS---SCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTST
T ss_pred             CCCCCCEEEEecC---CCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccH
Confidence            9999999976541   139999999999999999999999999  89999999999999987889999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccC
Q 021831          187 VGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKR  260 (307)
Q Consensus       187 ~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~  260 (307)
                      +|++++++++..|++|+++.+++ +.+.++++|+++++++++.++.+.+.     .++|++||++|+. .+..+++++++
T Consensus       158 iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~  236 (333)
T 1wly_A          158 MGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKD-TLQKSLDCLRP  236 (333)
T ss_dssp             THHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSCTT-THHHHHHTEEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCcHH-HHHHHHHhhcc
Confidence            99999999999999999997765 55668889999999988766555443     3799999999995 88999999999


Q ss_pred             CcEEEEeccCc
Q 021831          261 GGHYMTLHGET  271 (307)
Q Consensus       261 ~G~~v~~g~~~  271 (307)
                      +|+++.+|...
T Consensus       237 ~G~iv~~g~~~  247 (333)
T 1wly_A          237 RGMCAAYGHAS  247 (333)
T ss_dssp             EEEEEECCCTT
T ss_pred             CCEEEEEecCC
Confidence            99999999654

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.4e-41  Score=308.27  Aligned_cols=240  Identities=23%  Similarity=0.307  Sum_probs=201.0

Q ss_pred             cccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEec
Q 021831           25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG  104 (307)
Q Consensus        25 ~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G  104 (307)
                      |+++||+++++.+   +.++++ +.+.|+|+++||+|||.++|||++|++++.+.........+|.++|||++|+|+++|
T Consensus         1 m~~~mka~~~~~~---~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG   76 (352)
T 1e3j_A            1 MASDNLSAVLYKQ---NDLRLE-QRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVG   76 (352)
T ss_dssp             ---CCEEEEEEET---TEEEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEEC
T ss_pred             CcccCEEEEEEcC---CcEEEE-EecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeC
Confidence            4567999999964   468888 899999999999999999999999999887421111123579999999999999999


Q ss_pred             CCCCCCCCCCEEEEecCC------------------------CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHH
Q 021831          105 ASVRSLTVGQEVFGALHP------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAAL  160 (307)
Q Consensus       105 ~~v~~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~  160 (307)
                      ++|++|++||||++.+..                        ...+|+|+||+.++.+.++++|+++++++++.+ .++.
T Consensus        77 ~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~  155 (352)
T 1e3j_A           77 KNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALL-EPLS  155 (352)
T ss_dssp             TTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTH-HHHH
T ss_pred             CCCCCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhh-chHH
Confidence            999999999999875311                        013699999999999999999999999998866 5888


Q ss_pred             HHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCC-hhHHHHh----
Q 021831          161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSS-KDIELAI----  234 (307)
Q Consensus       161 ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~-~~~~~~~----  234 (307)
                      +||+++ ..+++++|++|||+|+ |++|++++|+|+.+|++|+++.++ ++.+.++++|+++++++++ .++.+.+    
T Consensus       156 ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~  233 (352)
T 1e3j_A          156 VGVHAC-RRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERI  233 (352)
T ss_dssp             HHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHH
T ss_pred             HHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHh
Confidence            999999 4889999999999996 999999999999999998888654 4567789999999999874 4433322    


Q ss_pred             c----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          235 K----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       235 ~----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .    +++|++||++|+...+..++++|+++|+++.+|...
T Consensus       234 ~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~  274 (352)
T 1e3j_A          234 RSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGS  274 (352)
T ss_dssp             HHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCS
T ss_pred             ccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCC
Confidence            1    379999999999867899999999999999999653

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=9.4e-42  Score=310.97  Aligned_cols=233  Identities=23%  Similarity=0.298  Sum_probs=205.4

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHH-HHhCCCccccCCCCCcccccceEEEEEEecCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTR-MRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~-~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v  107 (307)
                      ||++++++++   .++++ +.+.|+|+++||+|||.++|||++|++ ++.|..    ...+|.++|||++|+|+++|++|
T Consensus         1 MkA~~~~~~~---~~~~~-e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~----~~~~p~v~G~E~~G~V~~vG~~v   72 (352)
T 3fpc_A            1 MKGFAMLSIG---KVGWI-EKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAI----GERHNMILGHEAVGEVVEVGSEV   72 (352)
T ss_dssp             CEEEEEEETT---EEEEE-ECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTT----CCCSSEECCCEEEEEEEEECTTC
T ss_pred             CeEEEEccCC---CceEE-eCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCC----CCCCCcccCCcceEEEEEECCCC
Confidence            8999999665   47888 999999999999999999999999999 567742    34679999999999999999999


Q ss_pred             CCCCCCCEEEEecC--------------------------CCCCCCcceeEEEecCC--ceeeCCCCCChhhhccccchH
Q 021831          108 RSLTVGQEVFGALH--------------------------PTAVRGTYADYAVLSED--ELTPKPVSVTHADASAIPFAA  159 (307)
Q Consensus       108 ~~~~~Gd~V~~~~~--------------------------~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~  159 (307)
                      ++|++||||++.+.                          ....+|+|+||+.++.+  .++++|+++++++++.++.++
T Consensus        73 ~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~  152 (352)
T 3fpc_A           73 KDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMM  152 (352)
T ss_dssp             CSCCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHH
T ss_pred             CcCCCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchh
Confidence            99999999986421                          11256999999999976  899999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhc--
Q 021831          160 LTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIK--  235 (307)
Q Consensus       160 ~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~--  235 (307)
                      .|||+++ +..++++|++|||+|+ |++|++++|+|+.+|+ +|+++.+++ +.+.++++|+++++++++.++.+.+.  
T Consensus       153 ~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~  230 (352)
T 3fpc_A          153 TTGFHGA-ELANIKLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKA  230 (352)
T ss_dssp             HHHHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHH
T ss_pred             HHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHH
Confidence            9999999 4899999999999995 9999999999999999 899986654 56779999999999998877766654  


Q ss_pred             --C-CccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          236 --G-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       236 --~-~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                        + ++|+|||++|+...+..++++|+++|+++.+|...
T Consensus       231 t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~  269 (352)
T 3fpc_A          231 TDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLG  269 (352)
T ss_dssp             TTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCC
T ss_pred             cCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccC
Confidence              3 79999999999768999999999999999999764

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=8.6e-42  Score=321.36  Aligned_cols=255  Identities=25%  Similarity=0.366  Sum_probs=212.1

Q ss_pred             CcccccccccccceeEEEEcccC-------------CCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCC--
Q 021831           16 SPLRFVRFLVTTSCRAVVLPRFG-------------GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYG--   80 (307)
Q Consensus        16 ~~~~~~~~~~~~~~ka~~~~~~~-------------~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~--   80 (307)
                      .|-.++...+|++||++++..++             ..+.++++ +.+.|+|+++||+|||.++|||++|++...+..  
T Consensus        18 ~~~~~~~~~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~-e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~   96 (456)
T 3krt_A           18 TPADIAALPLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLD-DVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLS   96 (456)
T ss_dssp             CHHHHHHSCCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSC
T ss_pred             ChhhhccCCCCcceEEEEEeccccccccccccccCCCCCCcEEE-EccCCCCCCCeEEEEEEEEEecchhhhhhhcCccc
Confidence            44455566789999999999762             23678998 999999999999999999999999987654311  


Q ss_pred             -----------cc-ccCCCCC-cccccceEEEEEEecCCCCCCCCCCEEEEecCC----------------------C-C
Q 021831           81 -----------RS-IFEPLLP-LILGRDISGEVAAVGASVRSLTVGQEVFGALHP----------------------T-A  124 (307)
Q Consensus        81 -----------~~-~~~~~~p-~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~----------------------~-~  124 (307)
                                 .. .....+| .++|||++|+|+++|++|++|++||+|++.+..                      . .
T Consensus        97 ~~~~~~~~g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~  176 (456)
T 3krt_A           97 TFGFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFET  176 (456)
T ss_dssp             SHHHHHHHHTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTS
T ss_pred             chhhhhhccccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCCcccccccccccccccCccccccccCC
Confidence                       00 0113467 699999999999999999999999999985421                      0 1


Q ss_pred             CCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHH--cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEE
Q 021831          125 VRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCA--ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHV  202 (307)
Q Consensus       125 ~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~V  202 (307)
                      .+|+|+||++++.++++++|+++++++++.++.++.|||+++...  +++++|++|||+|++|++|++++|+|+.+|++|
T Consensus       177 ~~G~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~v  256 (456)
T 3krt_A          177 NFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANP  256 (456)
T ss_dssp             SSCSSBSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred             CCCcccceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeE
Confidence            249999999999999999999999999999999999999998644  789999999999999999999999999999998


Q ss_pred             EEEeCC-ccHHHHHHcCCceEEeCCChhH-----------------HHHhc-----CCccEEEECCCChhhHHHHHhccc
Q 021831          203 SATCGS-KSIDRVLAAGAEQAVDYSSKDI-----------------ELAIK-----GKFDAVLDTIGAPETERLGLNFLK  259 (307)
Q Consensus       203 i~~~~~-~~~~~~~~~g~~~v~~~~~~~~-----------------~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~  259 (307)
                      ++++++ ++.+.++++|+++++++...++                 .+.+.     .++|+|||++|+. .+..++.+++
T Consensus       257 i~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~-~~~~~~~~l~  335 (456)
T 3krt_A          257 ICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRE-TFGASVFVTR  335 (456)
T ss_dssp             EEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHH-HHHHHHHHEE
T ss_pred             EEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCch-hHHHHHHHhh
Confidence            888654 4567789999999999876432                 13322     3899999999995 8999999999


Q ss_pred             CCcEEEEeccCcc
Q 021831          260 RGGHYMTLHGETA  272 (307)
Q Consensus       260 ~~G~~v~~g~~~~  272 (307)
                      ++|+++.+|....
T Consensus       336 ~~G~iv~~G~~~~  348 (456)
T 3krt_A          336 KGGTITTCASTSG  348 (456)
T ss_dssp             EEEEEEESCCTTC
T ss_pred             CCcEEEEEecCCC
Confidence            9999999997643

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=3.8e-41  Score=305.94  Aligned_cols=239  Identities=37%  Similarity=0.537  Sum_probs=208.8

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||+++++.++.++.++++ +.+.|+|+++||+|||.++|||++|++++.|...  ....+|.++|||++|+|+++|++|+
T Consensus         1 Mka~~~~~~g~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~v~G~E~~G~V~~vG~~v~   77 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVA-DLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVAS--PKLPLPHVLGADGSGVVDAVGPGVE   77 (343)
T ss_dssp             CEEEEECSSSSGGGEEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSS--TTCCSSEECCSEEEEEEEEECSSCC
T ss_pred             CeEEEEecCCCCceEEEE-ecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCC--CCCCCCcccccceEEEEEEECCCCC
Confidence            799999998877779998 9999999999999999999999999999998432  1136799999999999999999999


Q ss_pred             CCCCCCEEEEecC---C--------------------CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHH
Q 021831          109 SLTVGQEVFGALH---P--------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (307)
Q Consensus       109 ~~~~Gd~V~~~~~---~--------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (307)
                      +|++||||+..+.   .                    ...+|+|+||+.++.+.++++|+++++++++.++.++.|||++
T Consensus        78 ~~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~a  157 (343)
T 2eih_A           78 GFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQM  157 (343)
T ss_dssp             SCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHH
T ss_pred             CCCCCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHH
Confidence            9999999984221   0                    2236999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc-----CCcc
Q 021831          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFD  239 (307)
Q Consensus       166 l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~d  239 (307)
                      +....++++|++|||+|++|++|++++|+++.+|++|+++.++ ++.+.++++|+++++++++.++.+.+.     +++|
T Consensus       158 l~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d  237 (343)
T 2eih_A          158 VVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGAD  237 (343)
T ss_dssp             HTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEE
T ss_pred             HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCce
Confidence            9866789999999999999999999999999999999998765 455668889999999988766555443     3799


Q ss_pred             EEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          240 AVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       240 vvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ++||++|.. .+..++++++++|+++.+|...
T Consensus       238 ~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~  268 (343)
T 2eih_A          238 KVVDHTGAL-YFEGVIKATANGGRIAIAGASS  268 (343)
T ss_dssp             EEEESSCSS-SHHHHHHHEEEEEEEEESSCCC
T ss_pred             EEEECCCHH-HHHHHHHhhccCCEEEEEecCC
Confidence            999999954 8899999999999999999754

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=8.1e-41  Score=305.33  Aligned_cols=239  Identities=22%  Similarity=0.266  Sum_probs=205.0

Q ss_pred             cccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEec
Q 021831           25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG  104 (307)
Q Consensus        25 ~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G  104 (307)
                      ++++|+++.+..  .++.++++ +.+.|+|++|||+|||.++|||++|++.+.|...   ...+|.++|||++|+|+++|
T Consensus         6 ~~m~~~a~~~~~--~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~P~v~GhE~~G~V~~vG   79 (357)
T 2cf5_A            6 AERKTTGWAARD--PSGILSPY-TYTLRETGPEDVNIRIICCGICHTDLHQTKNDLG---MSNYPMVPGHEVVGEVVEVG   79 (357)
T ss_dssp             CCCEEEEEEECS--TTCCEEEE-EEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTT---CCCSSBCCCCEEEEEEEEEC
T ss_pred             CcceeEEEEEcc--CCCCcEEE-EecCCCCCCCEEEEEEEEEeecchhhhhhcCCCC---CCCCCeecCcceeEEEEEEC
Confidence            456788888774  44668998 9999999999999999999999999999988432   24579999999999999999


Q ss_pred             CCCCCCCCCCEEEEecC-------------------------------CCCCCCcceeEEEecCCceeeCCCCCChhhhc
Q 021831          105 ASVRSLTVGQEVFGALH-------------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADAS  153 (307)
Q Consensus       105 ~~v~~~~~Gd~V~~~~~-------------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa  153 (307)
                      ++|++|++||||+..+.                               +...+|+|+||+++|.+.++++|+++++++++
T Consensus        80 ~~v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa  159 (357)
T 2cf5_A           80 SDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAA  159 (357)
T ss_dssp             SSCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHT
T ss_pred             CCCCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhh
Confidence            99999999999975320                               01146999999999999999999999999999


Q ss_pred             cccchHHHHHHHHHHHcCCC-CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHH-HcCCceEEeCCChhH
Q 021831          154 AIPFAALTAWRALKCAARMS-EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVL-AAGAEQAVDYSSKDI  230 (307)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~-~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~-~~g~~~v~~~~~~~~  230 (307)
                      .+++++.|||+++. ..+++ +|++|||+|+ |++|++++|+|+.+|++|+++.+++ +.+.++ ++|+++++++.+.+.
T Consensus       160 ~l~~~~~ta~~~l~-~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~  237 (357)
T 2cf5_A          160 PLLCAGVTVYSPLS-HFGLKQPGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAK  237 (357)
T ss_dssp             GGGTHHHHHHHHHH-HTSTTSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHH
T ss_pred             hhhhhHHHHHHHHH-hcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHH
Confidence            99999999999997 56788 9999999995 9999999999999999999987654 456666 899999999887554


Q ss_pred             HHHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          231 ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       231 ~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ...+.+++|+|||++|+...+..++++++++|+++.+|...
T Consensus       238 ~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~  278 (357)
T 2cf5_A          238 MSELADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVIN  278 (357)
T ss_dssp             HHHSTTTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCS
T ss_pred             HHHhcCCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCC
Confidence            44444689999999998767899999999999999999754

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.8e-41  Score=304.80  Aligned_cols=235  Identities=28%  Similarity=0.442  Sum_probs=208.5

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||+++++.++.++.++++ +.+.|+|+++||+|||.++|||++|++++.|..   ....+|.++|||++|+|+++|++++
T Consensus         2 Mka~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~---~~~~~p~v~G~E~~G~V~~vG~~v~   77 (327)
T 1qor_A            2 ATRIEFHKHGGPEVLQAV-EFTPADPAENEIQVENKAIGINFIDTYIRSGLY---PPPSLPSGLGTEAAGIVSKVGSGVK   77 (327)
T ss_dssp             CEEEEBSSCCSGGGCEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSS---CCSSSSBCCCSCEEEEEEEECTTCC
T ss_pred             cEEEEEcCCCChhheEEe-ccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCC---CCCCCCCCCCceeEEEEEEECCCCC
Confidence            899999998888889999 999999999999999999999999999999843   2235789999999999999999999


Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHH
Q 021831          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG  188 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G  188 (307)
                      +|++|||| +.+.  ..+|+|+||+.++.+.++++|++++++++++++.+++|||+++.+..++++|++|||+||+|++|
T Consensus        78 ~~~~GdrV-~~~g--~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG  154 (327)
T 1qor_A           78 HIKAGDRV-VYAQ--SALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVG  154 (327)
T ss_dssp             SCCTTCEE-EESC--CSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHH
T ss_pred             CCCCCCEE-EECC--CCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHH
Confidence            99999999 4431  12499999999999999999999999999999999999999998788999999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCCc
Q 021831          189 FAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGG  262 (307)
Q Consensus       189 ~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G  262 (307)
                      ++++|+++..|++|+++.+++ +.+.++++|+++++++++.++.+.+.     +++|++||++|.. .+..++++++++|
T Consensus       155 ~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g~~-~~~~~~~~l~~~G  233 (327)
T 1qor_A          155 LIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRD-TWERSLDCLQRRG  233 (327)
T ss_dssp             HHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSCGG-GHHHHHHTEEEEE
T ss_pred             HHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCchH-HHHHHHHHhcCCC
Confidence            999999999999999997654 45667889999999988766655443     3799999999954 8999999999999


Q ss_pred             EEEEeccCc
Q 021831          263 HYMTLHGET  271 (307)
Q Consensus       263 ~~v~~g~~~  271 (307)
                      +++.+|...
T Consensus       234 ~iv~~g~~~  242 (327)
T 1qor_A          234 LMVSFGNSS  242 (327)
T ss_dssp             EEEECCCTT
T ss_pred             EEEEEecCC
Confidence            999999754

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8.6e-41  Score=307.61  Aligned_cols=242  Identities=23%  Similarity=0.338  Sum_probs=205.8

Q ss_pred             ccccccccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEE
Q 021831           20 FVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGE   99 (307)
Q Consensus        20 ~~~~~~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~   99 (307)
                      +.++.|..+||++++++++  +.++++ +.+.|+|+++||+|||.++|||++|++++.|...   ...+|.++|||++|+
T Consensus         9 ~~~~~~~~~mka~~~~~~g--~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~---~~~~P~v~GhE~~G~   82 (380)
T 1vj0_A            9 HHHHMMGLKAHAMVLEKFN--QPLVYK-EFEISDIPRGSILVEILSAGVCGSDVHMFRGEDP---RVPLPIILGHEGAGR   82 (380)
T ss_dssp             -----CCEEEEEEEBCSTT--SCCEEE-EEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCT---TCCSSBCCCCEEEEE
T ss_pred             hhhhHhhhheEEEEEecCC--CCeEEE-EccCCCCCCCEEEEEEeEEeecccchHHhcCCCC---CCCCCcccCcCcEEE
Confidence            4455677799999999876  368888 8999999999999999999999999999998432   245789999999999


Q ss_pred             EEEecCCCC------CCCCCCEEEEecC------------------------CC--------CCCCcceeEEEe-cCCce
Q 021831          100 VAAVGASVR------SLTVGQEVFGALH------------------------PT--------AVRGTYADYAVL-SEDEL  140 (307)
Q Consensus       100 V~~~G~~v~------~~~~Gd~V~~~~~------------------------~~--------~~~g~~~~~~~~-~~~~~  140 (307)
                      |+++| +|+      +|++||||++.+.                        +.        ..+|+|+||+++ |.+.+
T Consensus        83 V~~vG-~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~  161 (380)
T 1vj0_A           83 VVEVN-GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDV  161 (380)
T ss_dssp             EEEES-SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCE
T ss_pred             EEEeC-CccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceE
Confidence            99999 999      9999999987521                        10        236999999999 99999


Q ss_pred             eeCCCCCChh-hhccccchHHHHHHHHHHHcC-CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHH
Q 021831          141 TPKPVSVTHA-DASAIPFAALTAWRALKCAAR-MSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLA  216 (307)
Q Consensus       141 ~~ip~~~~~~-~aa~~~~~~~ta~~~l~~~~~-~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~  216 (307)
                      +++|++++++ +++.+. ++.|||++++ ..+ +++|++|||+| +|++|++++|+|+.+|+ +|+++.++ ++.+.+++
T Consensus       162 ~~iP~~l~~~~~Aa~~~-~~~ta~~al~-~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~  238 (380)
T 1vj0_A          162 LKVSEKDDLDVLAMAMC-SGATAYHAFD-EYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE  238 (380)
T ss_dssp             EEECTTSCHHHHHHHTT-HHHHHHHHHH-TCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH
T ss_pred             EECCCCCChHHhHhhhc-HHHHHHHHHH-hcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH
Confidence            9999999999 666665 9999999995 678 99999999999 79999999999999995 99999755 55677899


Q ss_pred             cCCceEEeCC---ChhHHHHhc----C-CccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          217 AGAEQAVDYS---SKDIELAIK----G-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       217 ~g~~~v~~~~---~~~~~~~~~----~-~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +|+++++++.   +.++.+.+.    + ++|+|||++|+...+..++++|+++|+++.+|...
T Consensus       239 lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~  301 (380)
T 1vj0_A          239 IGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAV  301 (380)
T ss_dssp             TTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCS
T ss_pred             cCCcEEEeccccCcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCC
Confidence            9999999987   666655443    3 79999999998768999999999999999999765

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=7.2e-42  Score=308.26  Aligned_cols=238  Identities=23%  Similarity=0.276  Sum_probs=206.3

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++++++++.++.++++ +.+.|+|++|||+|||.++|||++|++++.|...  ....+|.++|||++|+|+++|  ++
T Consensus         1 MkA~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~v~G~E~~G~V~~~G--v~   75 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQ-HLEESQLPAGDVTVDVHWSSLNYKDALAITGKGK--IIRHFPMIPGIDFAGTVHASE--DP   75 (324)
T ss_dssp             CEEEEEEESSSSEEEEEE-ECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTT--CCCSSSBCCCSEEEEEEEEES--ST
T ss_pred             CceEEEecCCCCceeeEe-ecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCC--CCCCCCccccceeEEEEEEeC--CC
Confidence            899999999988889999 9999999999999999999999999999998532  225789999999999999998  57


Q ss_pred             CCCCCCEEEEecC--CCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHH--HcCCCCCC-EEEEEcC
Q 021831          109 SLTVGQEVFGALH--PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKC--AARMSEGQ-RLLVLGG  183 (307)
Q Consensus       109 ~~~~Gd~V~~~~~--~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~-~VlI~Ga  183 (307)
                      +|++||||++...  +...+|+|+||+.+|.+.++++|+++++++++.++..+.|||+++..  ..++++++ +|||+|+
T Consensus        76 ~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga  155 (324)
T 3nx4_A           76 RFHAGQEVLLTGWGVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGA  155 (324)
T ss_dssp             TCCTTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESST
T ss_pred             CCCCCCEEEEcccccCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECC
Confidence            8999999997642  22346999999999999999999999999999999999999998863  35566643 4999999


Q ss_pred             CchHHHHHHHHHHHcCCEEEEEeC-CccHHHHHHcCCceEEeCCChhHHHHhc-CCccEEEECCCChhhHHHHHhcccCC
Q 021831          184 GGAVGFAAVQFSVASGCHVSATCG-SKSIDRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPETERLGLNFLKRG  261 (307)
Q Consensus       184 ~g~~G~~~~~~a~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~  261 (307)
                      +|++|++++|+|+.+|++|+++++ .++.+.++++|+++++++.+.+....+. +++|++||++|+. .+..++++++++
T Consensus       156 ~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~  234 (324)
T 3nx4_A          156 SGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGDK-VLAKVLAQMNYG  234 (324)
T ss_dssp             TSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSCHH-HHHHHHHTEEEE
T ss_pred             CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCCcH-HHHHHHHHHhcC
Confidence            999999999999999999999965 5667889999999999987654322222 5899999999998 899999999999


Q ss_pred             cEEEEeccCcc
Q 021831          262 GHYMTLHGETA  272 (307)
Q Consensus       262 G~~v~~g~~~~  272 (307)
                      |+++.+|....
T Consensus       235 G~iv~~G~~~~  245 (324)
T 3nx4_A          235 GCVAACGLAGG  245 (324)
T ss_dssp             EEEEECCCTTC
T ss_pred             CEEEEEecCCC
Confidence            99999997643

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=4.9e-41  Score=306.69  Aligned_cols=237  Identities=23%  Similarity=0.293  Sum_probs=202.3

Q ss_pred             cceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCC
Q 021831           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (307)
Q Consensus        27 ~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~  106 (307)
                      ++||+++++.+   +.++++ +.+.|+|+++||+|||.++|||++|++++.|.........+|.++|||++|+|+++|++
T Consensus         6 ~~mka~~~~~~---~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~   81 (356)
T 1pl8_A            6 PNNLSLVVHGP---GDLRLE-NYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSS   81 (356)
T ss_dssp             CCCEEEEEEET---TEEEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTT
T ss_pred             cCceEEEEecC---CcEEEE-EccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCC
Confidence            45999999964   468898 89999999999999999999999999988742111112357899999999999999999


Q ss_pred             CCCCCCCCEEEEecCC------------------------CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHH
Q 021831          107 VRSLTVGQEVFGALHP------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTA  162 (307)
Q Consensus       107 v~~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta  162 (307)
                      |++|++||||++.+..                        ...+|+|+||+.+|.+.++++|+++++++++.+ .++.+|
T Consensus        82 V~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~-~~~~ta  160 (356)
T 1pl8_A           82 VKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALI-EPLSVG  160 (356)
T ss_dssp             CCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHH-HHHHHH
T ss_pred             CCCCCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhh-chHHHH
Confidence            9999999999875310                        123699999999999999999999999998865 588899


Q ss_pred             HHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCCceEEeCC---ChhHHHHhc--
Q 021831          163 WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGAEQAVDYS---SKDIELAIK--  235 (307)
Q Consensus       163 ~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~~---~~~~~~~~~--  235 (307)
                      |+++ +..++++|++|||+|+ |++|++++|+|+.+|+ +|+++.++ ++.+.++++|++++++++   ..++.+.+.  
T Consensus       161 ~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~  238 (356)
T 1pl8_A          161 IHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQ  238 (356)
T ss_dssp             HHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHH
T ss_pred             HHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHH
Confidence            9999 4889999999999996 9999999999999999 89998755 456778999999999987   355554443  


Q ss_pred             --CCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          236 --GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       236 --~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                        +++|+|||++|+...+..++++|+++|+++.+|..
T Consensus       239 ~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~  275 (356)
T 1pl8_A          239 LGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLG  275 (356)
T ss_dssp             HTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCC
T ss_pred             hCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecC
Confidence              47999999999986789999999999999999964

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=1.5e-41  Score=319.09  Aligned_cols=250  Identities=28%  Similarity=0.342  Sum_probs=206.9

Q ss_pred             ccccccccceeEEEEcccC-----------CCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHh-----------
Q 021831           20 FVRFLVTTSCRAVVLPRFG-----------GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRS-----------   77 (307)
Q Consensus        20 ~~~~~~~~~~ka~~~~~~~-----------~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~-----------   77 (307)
                      .+...+|++||++++..++           .++.++++ +.+.|+|+++||+|||.++|||++|++...           
T Consensus        16 ~~~~~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~-e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~   94 (447)
T 4a0s_A           16 IEAAPVPDTYLALHLRAEDADMFKGVADKDVRKSLRLG-EVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLK   94 (447)
T ss_dssp             HHHSCCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHH
T ss_pred             hhccCCChhheeeeeeccccccccccccCCCCCCceEE-eccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhh
Confidence            3445689999999999887           12478999 999999999999999999999999985432           


Q ss_pred             --CCCccc-cCCCCC-cccccceEEEEEEecCCCCCCCCCCEEEEecCCC-----------------------CCCCcce
Q 021831           78 --GYGRSI-FEPLLP-LILGRDISGEVAAVGASVRSLTVGQEVFGALHPT-----------------------AVRGTYA  130 (307)
Q Consensus        78 --g~~~~~-~~~~~p-~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~-----------------------~~~g~~~  130 (307)
                        +....+ ....+| .++|||++|+|+++|++|++|++||||++.+...                       ..+|+|+
T Consensus        95 ~~~~~g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G~~a  174 (447)
T 4a0s_A           95 QNARQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLA  174 (447)
T ss_dssp             HHHTTCGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSCSSB
T ss_pred             hhcccCccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCCCCcee
Confidence              111111 123456 6999999999999999999999999999864210                       1159999


Q ss_pred             eEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHH--HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 021831          131 DYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKC--AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (307)
Q Consensus       131 ~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~  208 (307)
                      ||++++.+.++++|+++++++++.++.+++|||+++..  .+++++|++|||+|++|++|++++|+++.+|++|+++.++
T Consensus       175 ey~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~  254 (447)
T 4a0s_A          175 EYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSS  254 (447)
T ss_dssp             SEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             eeeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence            99999999999999999999999999999999999863  3889999999999999999999999999999998888654


Q ss_pred             -ccHHHHHHcCCceEEeCCChhH------------------HHHhc----CCccEEEECCCChhhHHHHHhcccCCcEEE
Q 021831          209 -KSIDRVLAAGAEQAVDYSSKDI------------------ELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYM  265 (307)
Q Consensus       209 -~~~~~~~~~g~~~v~~~~~~~~------------------~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v  265 (307)
                       ++.+.++++|+++++++.+.++                  .+.+.    +++|++||++|+. .+..++.+++++|+++
T Consensus       255 ~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~-~~~~~~~~l~~~G~iv  333 (447)
T 4a0s_A          255 AQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRV-TFGLSVIVARRGGTVV  333 (447)
T ss_dssp             HHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHH-HHHHHHHHSCTTCEEE
T ss_pred             HHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCch-HHHHHHHHHhcCCEEE
Confidence             4567789999999998654321                  22222    4799999999997 8899999999999999


Q ss_pred             EeccCc
Q 021831          266 TLHGET  271 (307)
Q Consensus       266 ~~g~~~  271 (307)
                      .+|...
T Consensus       334 ~~G~~~  339 (447)
T 4a0s_A          334 TCGSSS  339 (447)
T ss_dssp             ESCCTT
T ss_pred             EEecCC
Confidence            999654

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=4e-41  Score=307.93  Aligned_cols=238  Identities=26%  Similarity=0.411  Sum_probs=209.6

Q ss_pred             cccccceeEEEEcccCCC--ceeEE-cCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEE
Q 021831           23 FLVTTSCRAVVLPRFGGP--EVLEV-RPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGE   99 (307)
Q Consensus        23 ~~~~~~~ka~~~~~~~~~--~~~~~-~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~   99 (307)
                      ..++.+||++++++++.+  +.+++ + +.+.|+|++|||+|||.++|||++|++++.|...  ....+|.++|||++|+
T Consensus        18 ~~~~~~MkA~~~~~~g~~~~~~l~~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~--~~~~~P~i~G~E~~G~   94 (362)
T 2c0c_A           18 LYFQSMMQKLVVTRLSPNFREAVTLSR-DCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYD--PSVKPPFDIGFEGIGE   94 (362)
T ss_dssp             HHHCCEEEEEEECSCCSSHHHHEEEEE-EEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTC--TTCCSCEECCSEEEEE
T ss_pred             ccchhhceEEEEeecCCCccceeEEEe-ecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCC--CCCCCCCCCCceeEEE
Confidence            346788999999988754  56888 8 9999999999999999999999999999998432  1246799999999999


Q ss_pred             EEEecCCCC-CCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEE
Q 021831          100 VAAVGASVR-SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRL  178 (307)
Q Consensus       100 V~~~G~~v~-~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~V  178 (307)
                      |+++|++|+ +|++||||++...     |+|+||++++.+.++++|+. + .++++++.+++|||+++.+.+++++|++|
T Consensus        95 V~~vG~~V~~~~~vGdrV~~~~~-----G~~aey~~v~~~~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~V  167 (362)
T 2c0c_A           95 VVALGLSASARYTVGQAVAYMAP-----GSFAEYTVVPASIATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKV  167 (362)
T ss_dssp             EEEECTTGGGTCCTTCEEEEECS-----CCSBSEEEEEGGGCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEE
T ss_pred             EEEECCCccCCCCCCCEEEEccC-----CcceeEEEEcHHHeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEE
Confidence            999999999 9999999998764     99999999999999999996 4 46677888999999999878899999999


Q ss_pred             EEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhc----CCccEEEECCCChhhHHH
Q 021831          179 LVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERL  253 (307)
Q Consensus       179 lI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~----~~~dvvid~~g~~~~~~~  253 (307)
                      ||+||+|++|++++|+++.+|++|+++.+++ +.+.++++|+++++++++.++.+.+.    +++|++|||+|+. .+..
T Consensus       168 lV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~-~~~~  246 (362)
T 2c0c_A          168 LVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGA-MFDL  246 (362)
T ss_dssp             EETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECSCTH-HHHH
T ss_pred             EEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECCCHH-HHHH
Confidence            9999999999999999999999999997764 56778899999999988776655543    4799999999986 8899


Q ss_pred             HHhcccCCcEEEEeccCc
Q 021831          254 GLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       254 ~~~~l~~~G~~v~~g~~~  271 (307)
                      ++++++++|+++.+|...
T Consensus       247 ~~~~l~~~G~iv~~g~~~  264 (362)
T 2c0c_A          247 AVDALATKGRLIVIGFIS  264 (362)
T ss_dssp             HHHHEEEEEEEEECCCGG
T ss_pred             HHHHHhcCCEEEEEeCCC
Confidence            999999999999999753

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=5.3e-41  Score=305.07  Aligned_cols=237  Identities=22%  Similarity=0.310  Sum_probs=201.5

Q ss_pred             cceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCC
Q 021831           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (307)
Q Consensus        27 ~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~  106 (307)
                      .+||++++++++.  .++++ +.+.|+|+++||+|||.++|||++|++++.|.... ....+|.++|||++|+|+++|++
T Consensus         2 ~~mka~~~~~~g~--~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~p~i~G~E~~G~V~~vG~~   77 (344)
T 2h6e_A            2 VKSKAALLKKFSE--PLSIE-DVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAK-QGFRLPIILGHENAGTIVEVGEL   77 (344)
T ss_dssp             EEEEBCEECSCCC--------EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCC-TTCCSSEECCCCEEEEEEEECTT
T ss_pred             ceeEEEEEecCCC--CCeEE-EeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcc-cCCCCCccccccceEEEEEECCC
Confidence            5799999998764  38888 89999999999999999999999999999984321 12367999999999999999999


Q ss_pred             CCCCCCCCEEEEecCC-----------------------CCCCCcceeEEEec-CCceeeCCCCCChhhhccccchHHHH
Q 021831          107 VRSLTVGQEVFGALHP-----------------------TAVRGTYADYAVLS-EDELTPKPVSVTHADASAIPFAALTA  162 (307)
Q Consensus       107 v~~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~-~~~~~~ip~~~~~~~aa~~~~~~~ta  162 (307)
                       ++|++||||++....                       ...+|+|+||+.+| .+.++++ +++++++++.+++++.||
T Consensus        78 -~~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta  155 (344)
T 2h6e_A           78 -AKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTS  155 (344)
T ss_dssp             -CCCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHH
T ss_pred             -CCCCCCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHH
Confidence             999999999775321                       02469999999999 9999999 999999999999999999


Q ss_pred             HHHHHHH----cCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCC-ccHHHHHHcCCceEEeCCC-hhHHHHh
Q 021831          163 WRALKCA----ARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGS-KSIDRVLAAGAEQAVDYSS-KDIELAI  234 (307)
Q Consensus       163 ~~~l~~~----~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~-~~~~~~~  234 (307)
                      |+++...    .++ +|++|||+|+ |++|++++|+|+.+  |++|+++.++ ++.+.++++|+++++++.+ .++.+.+
T Consensus       156 ~~al~~~~~~~~~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~  233 (344)
T 2h6e_A          156 MGAIRQALPFISKF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKL  233 (344)
T ss_dssp             HHHHHHHHHHHTTC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHH
T ss_pred             HHHHHhhhhcccCC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHh
Confidence            9999854    288 9999999998 99999999999999  9999999754 5567789999999998876 5555555


Q ss_pred             c-C-CccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          235 K-G-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       235 ~-~-~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      . + ++|+|||++|+...+..++++++++|+++.+|.+.
T Consensus       234 ~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~  272 (344)
T 2h6e_A          234 TDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEG  272 (344)
T ss_dssp             HTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCS
T ss_pred             hcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCC
Confidence            4 3 79999999999878899999999999999999764

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=2.1e-40  Score=301.32  Aligned_cols=233  Identities=22%  Similarity=0.296  Sum_probs=199.2

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCC-CCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPD-LKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~-~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v  107 (307)
                      |||++++.+|   .++++ |.|+|+ +++|||||||.++|||++|++.+.|.    ....+|+++|||++|+|+++|++|
T Consensus         1 MkAvv~~~~g---~l~v~-e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~----~~~~~P~i~G~E~~G~V~~vG~~V   72 (346)
T 4a2c_A            1 MKSVVNDTDG---IVRVA-ESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKN----GAHYYPITLGHEFSGYIDAVGSGV   72 (346)
T ss_dssp             CEEEEECSSS---CEEEE-ECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSS----CSSSSSBCCCCEEEEEEEEECTTC
T ss_pred             CCEEEEecCC---CEEEE-EEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCC----CCCCCCccccEEEEEEEEEECCCc
Confidence            8999999655   58999 999998 57999999999999999999998884    345689999999999999999999


Q ss_pred             CCCCCCCEEEEecC-----------------------CCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHH
Q 021831          108 RSLTVGQEVFGALH-----------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (307)
Q Consensus       108 ~~~~~Gd~V~~~~~-----------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (307)
                      +++++||+|++...                       +...+|+|+||+++|.+.++++|+++++++++++. ++.++++
T Consensus        73 ~~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~-~~~~~~~  151 (346)
T 4a2c_A           73 DDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE-PITVGLH  151 (346)
T ss_dssp             CSCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHH-HHHHHHH
T ss_pred             ccccCCCeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchheEEECCCCCCHHHHHhch-HHHHHHH
Confidence            99999999987542                       12356999999999999999999999999998764 4444454


Q ss_pred             HHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeC-CccHHHHHHcCCceEEeCCChhHHHHhc-----CC
Q 021831          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCG-SKSIDRVLAAGAEQAVDYSSKDIELAIK-----GK  237 (307)
Q Consensus       165 ~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~-Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~  237 (307)
                      ++ ...++++|++|||+|+ |++|++++|+|+.+|++ ++++.. .++.+.++++|+++++++++.++.+...     ++
T Consensus       152 ~~-~~~~~~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g  229 (346)
T 4a2c_A          152 AF-HLAQGCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRF  229 (346)
T ss_dssp             HH-HHTTCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCS
T ss_pred             HH-HHhccCCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCC
Confidence            44 5889999999999996 99999999999999995 455544 4556789999999999999876655443     47


Q ss_pred             ccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       238 ~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      +|+|||++|....++.++++++++|+++.+|....
T Consensus       230 ~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~  264 (346)
T 4a2c_A          230 NQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQ  264 (346)
T ss_dssp             SEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSS
T ss_pred             cccccccccccchhhhhhheecCCeEEEEEeccCC
Confidence            99999999998889999999999999999997654

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=2.7e-40  Score=302.82  Aligned_cols=238  Identities=21%  Similarity=0.259  Sum_probs=201.8

Q ss_pred             ccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecC
Q 021831           26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (307)
Q Consensus        26 ~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~  105 (307)
                      +++|+++..  ++.++.++++ +.+.|+|++|||+|||.++|||++|++++.|...   ...+|.++|||++|+|+++|+
T Consensus        14 ~mk~~~~~~--~~~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~P~v~GhE~~G~V~~vG~   87 (366)
T 1yqd_A           14 PVKAFGWAA--RDQSGHLSPF-NFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWG---FSMYPLVPGHEIVGEVTEVGS   87 (366)
T ss_dssp             SEEEEEEEE--CSTTCCEEEE-EEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSS---CCCSSBCCCCCEEEEEEEECT
T ss_pred             CeeEEEEEE--cCCCCCcEEE-EccCCCCCCCeEEEEEEEEeechhhHHHHcCCCC---CCCCCEecccceEEEEEEECC
Confidence            344555554  4556779998 9999999999999999999999999999988432   245789999999999999999


Q ss_pred             CCCCCCCCCEEEEecC-------------------------------CCCCCCcceeEEEecCCceeeCCCCCChhhhcc
Q 021831          106 SVRSLTVGQEVFGALH-------------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASA  154 (307)
Q Consensus       106 ~v~~~~~Gd~V~~~~~-------------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~  154 (307)
                      +|++|++||||+..+.                               +...+|+|+||+.+|.+.++++|+++++++++.
T Consensus        88 ~V~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~  167 (366)
T 1yqd_A           88 KVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAP  167 (366)
T ss_dssp             TCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGG
T ss_pred             CCCcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHhhh
Confidence            9999999999975211                               011469999999999999999999999999999


Q ss_pred             ccchHHHHHHHHHHHcCCC-CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHH-HcCCceEEeCCChhHH
Q 021831          155 IPFAALTAWRALKCAARMS-EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVL-AAGAEQAVDYSSKDIE  231 (307)
Q Consensus       155 ~~~~~~ta~~~l~~~~~~~-~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~-~~g~~~v~~~~~~~~~  231 (307)
                      +++++.|||+++. ...++ +|++|||+|+ |++|++++|+|+.+|++|+++.++ ++.+.++ ++|+++++++.+.+..
T Consensus       168 l~~~~~ta~~al~-~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~  245 (366)
T 1yqd_A          168 LLCAGITVYSPLK-YFGLDEPGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQM  245 (366)
T ss_dssp             GGTHHHHHHHHHH-HTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHH
T ss_pred             hhhhHHHHHHHHH-hcCcCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHH
Confidence            9999999999997 56777 9999999996 999999999999999999998755 4555655 8999999998876544


Q ss_pred             HHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       232 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ..+.+++|+|||++|+...+..++++|+++|+++.+|...
T Consensus       246 ~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~  285 (366)
T 1yqd_A          246 QAAAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPE  285 (366)
T ss_dssp             HHTTTCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCS
T ss_pred             HHhhCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCC
Confidence            4444689999999998756789999999999999999764

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.9e-40  Score=299.51  Aligned_cols=239  Identities=24%  Similarity=0.295  Sum_probs=202.3

Q ss_pred             cceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCC
Q 021831           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (307)
Q Consensus        27 ~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~  106 (307)
                      ++||+++++.++.+..++++ +.+.|+|+++||+|||.++|||++|++++.|...  ....+|.++|||++|+|++.  +
T Consensus         2 ~~mka~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~v~G~E~~G~V~~~--~   76 (328)
T 1xa0_A            2 SAFQAFVVNKTETEFTAGVQ-TISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGK--IVKTYPFVPGIDLAGVVVSS--Q   76 (328)
T ss_dssp             CEEEEEEEEEETTEEEEEEE-EEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGS--SCCSSSBCCCSEEEEEEEEC--C
T ss_pred             CcceEEEEecCCCcceeEEE-eccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCC--CCCCCCcccCcceEEEEEec--C
Confidence            57999999988876678998 9999999999999999999999999999888421  12357899999999999995  5


Q ss_pred             CCCCCCCCEEEEecC--CCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHH--HcCCCCCC-EEEEE
Q 021831          107 VRSLTVGQEVFGALH--PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKC--AARMSEGQ-RLLVL  181 (307)
Q Consensus       107 v~~~~~Gd~V~~~~~--~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~-~VlI~  181 (307)
                      +++|++||||++...  +...+|+|+||+.+|.+.++++|+++++++++.+++++.|+|.++..  ..++++|+ +|||+
T Consensus        77 v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~  156 (328)
T 1xa0_A           77 HPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVT  156 (328)
T ss_dssp             SSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEES
T ss_pred             CCCCCCCCEEEEccccCCCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEe
Confidence            788999999988642  12245999999999999999999999999999999999999988753  46788997 99999


Q ss_pred             cCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChh--HHHHhc-CCccEEEECCCChhhHHHHHhc
Q 021831          182 GGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKD--IELAIK-GKFDAVLDTIGAPETERLGLNF  257 (307)
Q Consensus       182 Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~--~~~~~~-~~~dvvid~~g~~~~~~~~~~~  257 (307)
                      |++|++|++++|+|+.+|++|++++++ ++.+.++++|+++++++++.+  ....+. +++|++||++|+. .+..++++
T Consensus       157 Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~  235 (328)
T 1xa0_A          157 GATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGR-TLATVLSR  235 (328)
T ss_dssp             STTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTTT-THHHHHHT
T ss_pred             cCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcHH-HHHHHHHh
Confidence            999999999999999999999998765 567889999999999987643  112222 4799999999996 88999999


Q ss_pred             ccCCcEEEEeccCc
Q 021831          258 LKRGGHYMTLHGET  271 (307)
Q Consensus       258 l~~~G~~v~~g~~~  271 (307)
                      ++++|+++.+|...
T Consensus       236 l~~~G~~v~~G~~~  249 (328)
T 1xa0_A          236 MRYGGAVAVSGLTG  249 (328)
T ss_dssp             EEEEEEEEECSCCS
T ss_pred             hccCCEEEEEeecC
Confidence            99999999999654

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=8.2e-41  Score=303.71  Aligned_cols=236  Identities=24%  Similarity=0.284  Sum_probs=203.7

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++++++++.+  ++++ +.+.|+|+++||+|||.++|||++|++++.|.........+|.++|||++|+|+++|++|+
T Consensus         1 Mka~~~~~~g~~--l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~   77 (343)
T 2dq4_A            1 MRALAKLAPEEG--LTLV-DRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVR   77 (343)
T ss_dssp             CEEEEECSSSSS--CEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCC
T ss_pred             CeEEEEeCCCCc--EEEE-eccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCC
Confidence            799999987754  8888 9999999999999999999999999999998432100246789999999999999999999


Q ss_pred             CCCCCCEEEEecC-----------------------CCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHH
Q 021831          109 SLTVGQEVFGALH-----------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (307)
Q Consensus       109 ~~~~Gd~V~~~~~-----------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (307)
                      +|++||||++...                       +...+|+|+||++++.+.++++|+++++++++.+ .++.+||++
T Consensus        78 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta~~~  156 (343)
T 2dq4_A           78 RPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAIL-EPFGNAVHT  156 (343)
T ss_dssp             SSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTH-HHHHHHHHH
T ss_pred             cCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHHeEECCCCCCHHHHHhh-hHHHHHHHH
Confidence            9999999988531                       1124699999999999999999999999999887 578899999


Q ss_pred             HHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhc----CCcc
Q 021831          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIK----GKFD  239 (307)
Q Consensus       166 l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~----~~~d  239 (307)
                      +.+..++ +|++|||+|+ |++|++++|+|+.+|+ +|+++.+++ +.+.++++ +++++++.++++.+.+.    +++|
T Consensus       157 l~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~~~g~D  233 (343)
T 2dq4_A          157 VYAGSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVTGSGVE  233 (343)
T ss_dssp             HHSTTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHHSSCEE
T ss_pred             HHHhCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhcCCCCC
Confidence            9657888 9999999998 9999999999999999 999997654 45667888 99999988766665543    4799


Q ss_pred             EEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          240 AVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       240 vvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +|||++|+...+..++++|+++|+++.+|...
T Consensus       234 ~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~  265 (343)
T 2dq4_A          234 VLLEFSGNEAAIHQGLMALIPGGEARILGIPS  265 (343)
T ss_dssp             EEEECSCCHHHHHHHHHHEEEEEEEEECCCCS
T ss_pred             EEEECCCCHHHHHHHHHHHhcCCEEEEEecCC
Confidence            99999999668899999999999999999754

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=5.7e-41  Score=303.16  Aligned_cols=240  Identities=23%  Similarity=0.288  Sum_probs=204.2

Q ss_pred             cccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEec
Q 021831           25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG  104 (307)
Q Consensus        25 ~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G  104 (307)
                      ||++||++++++++.+..++++ +.+.|+|+++||+|||.++|||++|++++.|...  ....+|.++|||++|+|+++ 
T Consensus         1 m~~~mka~~~~~~g~~~~l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~i~G~E~~G~V~~~-   76 (330)
T 1tt7_A            1 MSTLFQALQAEKNADDVSVHVK-TISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGN--IVREYPLILGIDAAGTVVSS-   76 (330)
T ss_dssp             -CCEEEEEEECCGGGSCCCEEE-EEESSSSCSSSEEEEECCEEECHHHHHHTSTTCT--TCSSCSEECCSEEEEEEEEC-
T ss_pred             CCCcceEEEEecCCCCcceeEe-ecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCC--CcCCCCccccceEEEEEEEc-
Confidence            5788999999988766678999 9999999999999999999999999999988432  12357899999999999996 


Q ss_pred             CCCCCCCCCCEEEEecC--CCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHH--HcCCCCCC-EEE
Q 021831          105 ASVRSLTVGQEVFGALH--PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKC--AARMSEGQ-RLL  179 (307)
Q Consensus       105 ~~v~~~~~Gd~V~~~~~--~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~g~-~Vl  179 (307)
                       ++++|++||||++...  +...+|+|+||+.++.+.++++|+++++++++.+++++.|+|.++..  ..++++|+ +||
T Consensus        77 -~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~Vl  155 (330)
T 1tt7_A           77 -NDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVL  155 (330)
T ss_dssp             -SSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEE
T ss_pred             -CCCCCCCCCEEEEcccccCCCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEE
Confidence             5688999999988642  12245999999999999999999999999999999999999988753  46788997 999


Q ss_pred             EEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHH---Hhc-CCccEEEECCCChhhHHHH
Q 021831          180 VLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIEL---AIK-GKFDAVLDTIGAPETERLG  254 (307)
Q Consensus       180 I~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~---~~~-~~~dvvid~~g~~~~~~~~  254 (307)
                      |+|++|++|++++|+|+.+|++|++++++ ++.+.++++|+++++++++.+ .+   .+. +++|++|||+|+. .+..+
T Consensus       156 V~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~-~~~~~~~~~~~~d~vid~~g~~-~~~~~  233 (330)
T 1tt7_A          156 VTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVY-DGTLKALSKQQWQGAVDPVGGK-QLASL  233 (330)
T ss_dssp             EESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHC-SSCCCSSCCCCEEEEEESCCTH-HHHHH
T ss_pred             EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCch-HHHHHHhhcCCccEEEECCcHH-HHHHH
Confidence            99999999999999999999999998765 567788999999999865322 11   111 4799999999996 89999


Q ss_pred             HhcccCCcEEEEeccCc
Q 021831          255 LNFLKRGGHYMTLHGET  271 (307)
Q Consensus       255 ~~~l~~~G~~v~~g~~~  271 (307)
                      +++++++|+++.+|...
T Consensus       234 ~~~l~~~G~iv~~G~~~  250 (330)
T 1tt7_A          234 LSKIQYGGSVAVSGLTG  250 (330)
T ss_dssp             HTTEEEEEEEEECCCSS
T ss_pred             HHhhcCCCEEEEEecCC
Confidence            99999999999999754

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=5.2e-40  Score=304.74  Aligned_cols=229  Identities=20%  Similarity=0.270  Sum_probs=195.2

Q ss_pred             eeEEcCcccCCC-CCCCeEEEEEeeeecChhhHHHHhCCCccc----cCCCCCcccccceEEEEEEecCCC------CCC
Q 021831           42 VLEVRPNVEVPD-LKPNEVLVRTRAVSINPLDTRMRSGYGRSI----FEPLLPLILGRDISGEVAAVGASV------RSL  110 (307)
Q Consensus        42 ~~~~~~~~~~p~-~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~----~~~~~p~~~G~e~~G~V~~~G~~v------~~~  110 (307)
                      .++++ +.+.|+ |+++||+|||.++|||++|++++.|.....    ....+|.++|||++|+|+++|++|      ++|
T Consensus        41 ~l~~~-~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~  119 (404)
T 3ip1_A           41 EVRVE-EVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRF  119 (404)
T ss_dssp             EEEEE-EECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEECTTCEETTTTEEC
T ss_pred             ceEEE-EcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEECCCccccccCCCC
Confidence            78999 999999 999999999999999999999998742211    124689999999999999999999      899


Q ss_pred             CCCCEEEEecC-----------------------CCCCCCcceeEEEecCCceeeCCCCCC------hhhhccccchHHH
Q 021831          111 TVGQEVFGALH-----------------------PTAVRGTYADYAVLSEDELTPKPVSVT------HADASAIPFAALT  161 (307)
Q Consensus       111 ~~Gd~V~~~~~-----------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~------~~~aa~~~~~~~t  161 (307)
                      ++||||++...                       +...+|+|+||+.++.+.++++|++++      +.++++++.++.|
T Consensus       120 ~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~t  199 (404)
T 3ip1_A          120 EIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFNVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSV  199 (404)
T ss_dssp             CTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHH
T ss_pred             CCCCEEEECCccCCCCCHHHHCcCcccCccccccCCCCCCCCcceEEechHHeEeccccccccccccchhHHhhhhHHHH
Confidence            99999997532                       123469999999999999999999875      4568888889999


Q ss_pred             HHHHHHHH-cCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeC-CccHHHHHHcCCceEEeCCChhHHHHhc---
Q 021831          162 AWRALKCA-ARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCG-SKSIDRVLAAGAEQAVDYSSKDIELAIK---  235 (307)
Q Consensus       162 a~~~l~~~-~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~---  235 (307)
                      ||+++... +++++|++|||+|+ |++|++++|+|+.+|+ +|+++.+ .++.+.++++|+++++++.+.++.+.+.   
T Consensus       200 a~~al~~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t  278 (404)
T 3ip1_A          200 AYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYT  278 (404)
T ss_dssp             HHHHHTTTSCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHT
T ss_pred             HHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHh
Confidence            99998644 48999999999997 9999999999999999 8999864 4567789999999999998877766654   


Q ss_pred             -C-CccEEEECCCCh-hhHHHHHhcc----cCCcEEEEeccCcc
Q 021831          236 -G-KFDAVLDTIGAP-ETERLGLNFL----KRGGHYMTLHGETA  272 (307)
Q Consensus       236 -~-~~dvvid~~g~~-~~~~~~~~~l----~~~G~~v~~g~~~~  272 (307)
                       + ++|+|||++|+. ..+..+.++|    +++|+++.+|....
T Consensus       279 ~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~  322 (404)
T 3ip1_A          279 NGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADA  322 (404)
T ss_dssp             TTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCS
T ss_pred             CCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCC
Confidence             3 799999999998 3556666777    99999999997653

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=2.7e-39  Score=292.86  Aligned_cols=230  Identities=20%  Similarity=0.270  Sum_probs=201.8

Q ss_pred             cceeEEEEcc--cC--CCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccc----eEE
Q 021831           27 TSCRAVVLPR--FG--GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRD----ISG   98 (307)
Q Consensus        27 ~~~ka~~~~~--~~--~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e----~~G   98 (307)
                      ++||+|+++.  +|  .++.++++ +.+.|+|++|||+|||.+++||++|+..+.+..    ....|.++|||    ++|
T Consensus         6 ~~mka~v~~~~~~g~~~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~----~~~~p~~~G~e~g~~~~G   80 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDTFSFV-ETPLGEPAEGQILVKNEYLSLDPAMRGWMNDAR----SYIPPVGIGEVMRALGVG   80 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTSEEEE-EEECCCCCTTCEEEEEEEEECCTHHHHHHSCSC----CSSCCCCTTSBCCCEEEE
T ss_pred             ccccEEEEEecCCCCCCCCceEEE-eccCCCCCCCEEEEEEEEEEeCHHHHhhhhccc----ccCCCCCCCcccCCceEE
Confidence            5699999986  23  46789999 999999999999999999999999999887732    22456777777    799


Q ss_pred             EEEEecCCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhh--ccccchHHHHHHHHHHHcCCCCCC
Q 021831           99 EVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADA--SAIPFAALTAWRALKCAARMSEGQ  176 (307)
Q Consensus        99 ~V~~~G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a--a~~~~~~~ta~~~l~~~~~~~~g~  176 (307)
                      +|++  +++++|++||||++.       |+|+||+.+|.+.++++|+++++.++  +.++.+++|||+++.+.+++++|+
T Consensus        81 ~V~~--~~v~~~~vGdrV~~~-------G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~  151 (336)
T 4b7c_A           81 KVLV--SKHPGFQAGDYVNGA-------LGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGE  151 (336)
T ss_dssp             EEEE--ECSTTCCTTCEEEEE-------CCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTC
T ss_pred             EEEe--cCCCCCCCCCEEecc-------CCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCC
Confidence            9999  458899999999875       99999999999999999999987776  788899999999997789999999


Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHH-HHcCCceEEeCCChhHHHHhc----CCccEEEECCCChhh
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRV-LAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPET  250 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~-~~~g~~~v~~~~~~~~~~~~~----~~~dvvid~~g~~~~  250 (307)
                      +|||+|++|++|++++|+++..|++|+++.+++ +.+.+ +++|+++++++++.++.+.+.    +++|++||++|+. .
T Consensus       152 ~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~  230 (336)
T 4b7c_A          152 TVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGGE-I  230 (336)
T ss_dssp             EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSCHH-H
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCCcc-h
Confidence            999999999999999999999999999997654 55667 899999999998877666554    4799999999986 8


Q ss_pred             HHHHHhcccCCcEEEEeccCc
Q 021831          251 ERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +..++++++++|+++.+|...
T Consensus       231 ~~~~~~~l~~~G~iv~~G~~~  251 (336)
T 4b7c_A          231 LDTVLTRIAFKARIVLCGAIS  251 (336)
T ss_dssp             HHHHHTTEEEEEEEEECCCGG
T ss_pred             HHHHHHHHhhCCEEEEEeecc
Confidence            999999999999999998654

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=3.9e-39  Score=293.11  Aligned_cols=238  Identities=26%  Similarity=0.397  Sum_probs=205.0

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCcc-----ccCCCCCcccccceEEEEEEe
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRS-----IFEPLLPLILGRDISGEVAAV  103 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-----~~~~~~p~~~G~e~~G~V~~~  103 (307)
                      ||+++++.++.+  ++++ +.|.|+|+++||+|||.++|||++|++++.|....     .....+|.++|||++|+|+++
T Consensus         1 Mka~~~~~~g~~--l~~~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   77 (347)
T 1jvb_A            1 MRAVRLVEIGKP--LSLQ-EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEV   77 (347)
T ss_dssp             CEEEEECSTTSC--CEEE-ECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEE
T ss_pred             CeEEEEecCCCC--eEEE-EeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEE
Confidence            799999987644  7888 89999999999999999999999999998884221     012367999999999999999


Q ss_pred             cCCCCCCCCCCEEEEecCC-----------------------CCCCCcceeEEEecC-CceeeCCCCCChhhhccccchH
Q 021831          104 GASVRSLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSE-DELTPKPVSVTHADASAIPFAA  159 (307)
Q Consensus       104 G~~v~~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~-~~~~~ip~~~~~~~aa~~~~~~  159 (307)
                      |++|++|++||||++....                       ...+|+|+||+.+|. +.++++ +++++++++.+++++
T Consensus        78 G~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~  156 (347)
T 1jvb_A           78 GDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSG  156 (347)
T ss_dssp             CTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHH
T ss_pred             CCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccceEEe-CCCCHHHcccchhhH
Confidence            9999999999999765311                       124699999999999 999999 999999999999999


Q ss_pred             HHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHh---
Q 021831          160 LTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAI---  234 (307)
Q Consensus       160 ~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~---  234 (307)
                      .|||+++. ..++++|++|||+|++|++|++++|+++.+ |++|+++.++ ++.+.++++|+++++++.+.++.+.+   
T Consensus       157 ~ta~~~l~-~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  235 (347)
T 1jvb_A          157 ITTYRAVR-KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRI  235 (347)
T ss_dssp             HHHHHHHH-HTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHH
T ss_pred             HHHHHHHH-hcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCEEecCCCccHHHHHHHH
Confidence            99999997 589999999999999779999999999999 9999988755 45667888999999998876653332   


Q ss_pred             c--CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          235 K--GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       235 ~--~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .  +++|++||++|+...+..++++++++|+++.+|...
T Consensus       236 ~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~  274 (347)
T 1jvb_A          236 TESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFG  274 (347)
T ss_dssp             TTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSC
T ss_pred             hcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCC
Confidence            2  479999999999878899999999999999999765

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=6.2e-40  Score=299.52  Aligned_cols=230  Identities=20%  Similarity=0.209  Sum_probs=197.9

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCC---CcccccceEEEEEEecC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL---PLILGRDISGEVAAVGA  105 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~---p~~~G~e~~G~V~~~G~  105 (307)
                      ||++++++++.  .++++ +.+.|+|+++||+|||.++|||++|++++.|....   ..+   |.++|||++| |+++|+
T Consensus         1 MkA~~~~~~~~--~l~~~-~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~~~~p~v~G~E~~G-V~~vG~   73 (357)
T 2b5w_A            1 MKAIAVKRGED--RPVVI-EKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGG---FPEGEDHLVLGHEAVG-VVVDPN   73 (357)
T ss_dssp             CEEEEEETTCS--SCEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTT---SCTTCSEEECCSEEEE-EEEECT
T ss_pred             CeEEEEeCCCC--ceEEE-ECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCC---CCCCCCCcccCceeEE-EEEECC
Confidence            79999997664  38888 89999999999999999999999999999985321   345   8999999999 999999


Q ss_pred             CCCCCCCCCEEEEecCCC----------------------------CCCCcceeEEEecCCceeeCCCCCChhhhccccc
Q 021831          106 SVRSLTVGQEVFGALHPT----------------------------AVRGTYADYAVLSEDELTPKPVSVTHADASAIPF  157 (307)
Q Consensus       106 ~v~~~~~Gd~V~~~~~~~----------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~  157 (307)
                      + ++|++||||++.+...                            ..+|+|+||+.++.+.++++|++++ ++ ++++.
T Consensus        74 ~-~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~~-aal~~  150 (357)
T 2b5w_A           74 D-TELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-EL-GFLIE  150 (357)
T ss_dssp             T-SSCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-TT-GGGHH
T ss_pred             C-CCCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-hh-hhhhc
Confidence            9 9999999998863211                            2369999999999999999999999 54 55777


Q ss_pred             hHHHHHHHHHHHcCCCCC------CEEEEEcCCchHHHHH-HHHH-HHcCCE-EEEEeCCc----cHHHHHHcCCceEEe
Q 021831          158 AALTAWRALKCAARMSEG------QRLLVLGGGGAVGFAA-VQFS-VASGCH-VSATCGSK----SIDRVLAAGAEQAVD  224 (307)
Q Consensus       158 ~~~ta~~~l~~~~~~~~g------~~VlI~Ga~g~~G~~~-~~~a-~~~G~~-Vi~~~~~~----~~~~~~~~g~~~v~~  224 (307)
                      +++|||++++ ..++++|      ++|||+|+ |++|+++ +|+| +.+|++ |+++.+++    +.+.++++|++++ +
T Consensus       151 ~~~ta~~al~-~~~~~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~  227 (357)
T 2b5w_A          151 PISITEKALE-HAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV-D  227 (357)
T ss_dssp             HHHHHHHHHH-HHHHTTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE-E
T ss_pred             hHHHHHHHHH-hcCCCCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc-C
Confidence            9999999994 7889999      99999998 9999999 9999 999996 99997765    5678999999999 9


Q ss_pred             CCChhHHH--HhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          225 YSSKDIEL--AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       225 ~~~~~~~~--~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ++++++.+  .+.+++|+|||++|+...+..++++++++|+++.+|...
T Consensus       228 ~~~~~~~~i~~~~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~  276 (357)
T 2b5w_A          228 SRQTPVEDVPDVYEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPS  276 (357)
T ss_dssp             TTTSCGGGHHHHSCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCC
T ss_pred             CCccCHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCC
Confidence            87655433  113489999999999768899999999999999999765

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=2.8e-39  Score=299.30  Aligned_cols=232  Identities=20%  Similarity=0.238  Sum_probs=200.0

Q ss_pred             ceeEEEEcccCCCceeEEcCcccCCCC-CC-----CeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEE
Q 021831           28 SCRAVVLPRFGGPEVLEVRPNVEVPDL-KP-----NEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVA  101 (307)
Q Consensus        28 ~~ka~~~~~~~~~~~~~~~~~~~~p~~-~~-----~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~  101 (307)
                      +||+++++.+   ..++++ +.+.|+| ++     +||+|||.++|||++|++++.|.    ....+|.++|||++|+|+
T Consensus         2 ~MkA~~~~~~---~~l~~~-~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~----~~~~~p~v~GhE~~G~V~   73 (398)
T 2dph_A            2 GNKSVVYHGT---RDLRVE-TVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGR----FIVPKGHVLGHEITGEVV   73 (398)
T ss_dssp             CEEEEEEEET---TEEEEE-EECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTS----SCCCTTCBCCCCEEEEEE
T ss_pred             ccEEEEEEcC---CCEEEE-EccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCC----CCCCCCcccCCceEEEEE
Confidence            5999999964   468888 8999987 68     99999999999999999999984    234678999999999999


Q ss_pred             EecCCCCCCCCCCEEEEecCC----------------------------------CCCCCcceeEEEecCC--ceeeCCC
Q 021831          102 AVGASVRSLTVGQEVFGALHP----------------------------------TAVRGTYADYAVLSED--ELTPKPV  145 (307)
Q Consensus       102 ~~G~~v~~~~~Gd~V~~~~~~----------------------------------~~~~g~~~~~~~~~~~--~~~~ip~  145 (307)
                      ++|++|++|++||||++.+..                                  ...+|+|+||++++.+  .++++|+
T Consensus        74 ~vG~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~~iP~  153 (398)
T 2dph_A           74 EKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGD  153 (398)
T ss_dssp             EECTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCEECSS
T ss_pred             EECCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeEEECCC
Confidence            999999999999999864210                                  0135999999999987  8999999


Q ss_pred             CCChhh----hccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCC
Q 021831          146 SVTHAD----ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGA  219 (307)
Q Consensus       146 ~~~~~~----aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~  219 (307)
                      ++++++    ++.++.++.|||++++ .+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.++ ++.+.++++|+
T Consensus       154 ~~~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa  231 (398)
T 2dph_A          154 KEQAMEKIKDLTLISDILPTGFHGCV-SAGVKPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGF  231 (398)
T ss_dssp             HHHHHHTHHHHTTTTTHHHHHHHHHH-HTTCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTC
T ss_pred             CCChhhhcchhhhhcCHHHHHHHHHH-HcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC
Confidence            999988    8888899999999994 889999999999996 9999999999999999 99999755 55677899999


Q ss_pred             ceEEeCCChhH-HHHhc----C-CccEEEECCCChh--------------hHHHHHhcccCCcEEEEeccC
Q 021831          220 EQAVDYSSKDI-ELAIK----G-KFDAVLDTIGAPE--------------TERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       220 ~~v~~~~~~~~-~~~~~----~-~~dvvid~~g~~~--------------~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      + ++++.+.++ .+.+.    + ++|+|||++|+..              .+..++++|+++|+++.+|..
T Consensus       232 ~-~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~  301 (398)
T 2dph_A          232 E-TIDLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIY  301 (398)
T ss_dssp             E-EEETTSSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCC
T ss_pred             c-EEcCCCcchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEeccc
Confidence            5 888877654 44433    3 7999999999763              688999999999999999976

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=1.2e-38  Score=291.03  Aligned_cols=237  Identities=21%  Similarity=0.292  Sum_probs=202.5

Q ss_pred             ccccceeEEEE-ccc---CCC--ceeEEcCcccCCCC-CCCeEEEEEeeeecChhhHHHHhCCC--ccccCCCCCccccc
Q 021831           24 LVTTSCRAVVL-PRF---GGP--EVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYG--RSIFEPLLPLILGR   94 (307)
Q Consensus        24 ~~~~~~ka~~~-~~~---~~~--~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~--~~~~~~~~p~~~G~   94 (307)
                      .+|++||++++ +.+   |.+  +.++++ +.+.|+| +++||+|||.++|||++|++.+.+..  ....+..+|.++||
T Consensus         4 ~~~~~mka~v~~~~~~~~g~p~~~~l~~~-~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~   82 (357)
T 2zb4_A            4 AAAMIVQRVVLNSRPGKNGNPVAENFRME-EVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDG   82 (357)
T ss_dssp             --CCEEEEEEECCCCCTTSCCCGGGEEEE-EEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEE
T ss_pred             cccccceEEEEeccCCCCCCCCcCceEEE-eecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccccc
Confidence            45788999999 565   555  789999 9999999 99999999999999999998777521  11113457889999


Q ss_pred             ceEEEEEEecCCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCC-----ChhhhccccchHHHHHHHHHHH
Q 021831           95 DISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSV-----THADASAIPFAALTAWRALKCA  169 (307)
Q Consensus        95 e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~-----~~~~aa~~~~~~~ta~~~l~~~  169 (307)
                      |++|+|++  ++|++|++||||++..      |+|+||++++.+.++++|+++     +++ +++++.+++|||+++.+.
T Consensus        83 E~~G~V~~--~~v~~~~vGdrV~~~~------G~~aey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~  153 (357)
T 2zb4_A           83 GGIGIIEE--SKHTNLTKGDFVTSFY------WPWQTKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEK  153 (357)
T ss_dssp             EEEEEEEE--ECSTTCCTTCEEEEEE------EESBSEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHH
T ss_pred             cEEEEEEe--cCCCCCCCCCEEEecC------CCcEEEEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHh
Confidence            99999999  8899999999998863      899999999999999999998     554 677888999999999778


Q ss_pred             cCCCCC--CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCc-cHHHHHH-cCCceEEeCCChhHHHHhc----CCccE
Q 021831          170 ARMSEG--QRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSK-SIDRVLA-AGAEQAVDYSSKDIELAIK----GKFDA  240 (307)
Q Consensus       170 ~~~~~g--~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~-~~~~~~~-~g~~~v~~~~~~~~~~~~~----~~~dv  240 (307)
                      +++++|  ++|||+|++|++|++++|+++..|+ +|+++.+++ +.+.+++ +|+++++++++.++.+.+.    +++|+
T Consensus       154 ~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~d~  233 (357)
T 2zb4_A          154 GHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDV  233 (357)
T ss_dssp             SCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTTCEEE
T ss_pred             cCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCCCCCE
Confidence            999999  9999999999999999999999999 999997764 4556665 9999999988766655543    37999


Q ss_pred             EEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          241 VLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       241 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +||++|+. .+..++++++++|+++.+|...
T Consensus       234 vi~~~G~~-~~~~~~~~l~~~G~iv~~G~~~  263 (357)
T 2zb4_A          234 YFDNVGGN-ISDTVISQMNENSHIILCGQIS  263 (357)
T ss_dssp             EEESCCHH-HHHHHHHTEEEEEEEEECCCGG
T ss_pred             EEECCCHH-HHHHHHHHhccCcEEEEECCcc
Confidence            99999985 8899999999999999999753

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8.7e-39  Score=296.00  Aligned_cols=232  Identities=22%  Similarity=0.282  Sum_probs=197.7

Q ss_pred             ceeEEEEcccCCCceeEEcCcccCCCCC-CCe------EEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEE
Q 021831           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLK-PNE------VLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEV  100 (307)
Q Consensus        28 ~~ka~~~~~~~~~~~~~~~~~~~~p~~~-~~e------VlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V  100 (307)
                      +||+++++.+   ..++++ +.+.|+|. ++|      |+|||.++|||++|++++.|..    ...+|.++|||++|+|
T Consensus         2 ~Mka~~~~~~---~~l~~~-~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~----~~~~p~v~GhE~~G~V   73 (398)
T 1kol_A            2 GNRGVVYLGS---GKVEVQ-KIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRT----TAQVGLVLGHEITGEV   73 (398)
T ss_dssp             CEEEEEEEET---TEEEEE-EECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCS----CCCTTCBCCCCEEEEE
T ss_pred             ccEEEEEecC---CceEEE-EecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCC----CCCCCcccCcccEEEE
Confidence            5999999965   368888 99999987 888      9999999999999999999842    2357899999999999


Q ss_pred             EEecCCCCCCCCCCEEEEecC-----------------------------CC----CCCCcceeEEEecCC--ceeeCCC
Q 021831          101 AAVGASVRSLTVGQEVFGALH-----------------------------PT----AVRGTYADYAVLSED--ELTPKPV  145 (307)
Q Consensus       101 ~~~G~~v~~~~~Gd~V~~~~~-----------------------------~~----~~~g~~~~~~~~~~~--~~~~ip~  145 (307)
                      +++|++|++|++||||+....                             +.    ..+|+|+||++++.+  .++++|+
T Consensus        74 ~~vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~  153 (398)
T 1kol_A           74 IEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPD  153 (398)
T ss_dssp             EEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSC
T ss_pred             EEECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEEECCC
Confidence            999999999999999985310                             00    235999999999986  8999999


Q ss_pred             CCChhh----hccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCC
Q 021831          146 SVTHAD----ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGA  219 (307)
Q Consensus       146 ~~~~~~----aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~  219 (307)
                      ++++++    ++.++.++.|||++++ .+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.++ ++.+.++++|+
T Consensus       154 ~~~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa  231 (398)
T 1kol_A          154 RDKAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGF  231 (398)
T ss_dssp             HHHHHHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC
T ss_pred             CcchhhhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCC
Confidence            999887    7888889999999997 789999999999995 9999999999999999 78888654 55677999999


Q ss_pred             ceEEeCCChh-HHHHhc----C-CccEEEECCCChh---------------hHHHHHhcccCCcEEEEeccC
Q 021831          220 EQAVDYSSKD-IELAIK----G-KFDAVLDTIGAPE---------------TERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       220 ~~v~~~~~~~-~~~~~~----~-~~dvvid~~g~~~---------------~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      + ++++++.+ +.+.+.    + ++|+|||++|+..               .+..++++++++|+++.+|..
T Consensus       232 ~-~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~  302 (398)
T 1kol_A          232 E-IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLY  302 (398)
T ss_dssp             E-EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCC
T ss_pred             c-EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccc
Confidence            7 78877543 444443    3 7999999999862               688999999999999999965

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=1.6e-39  Score=298.97  Aligned_cols=236  Identities=21%  Similarity=0.257  Sum_probs=201.8

Q ss_pred             ccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCc------------cc----------
Q 021831           26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGR------------SI----------   83 (307)
Q Consensus        26 ~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~------------~~----------   83 (307)
                      +++||+++...  .+..++++ +.+.|+|+++||+|||.+++||++|++++.|...            +.          
T Consensus         5 ~~~mka~v~~~--~~~~l~~~-~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~   81 (379)
T 3iup_A            5 ALQLRSRIKSS--GELELSLD-SIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAM   81 (379)
T ss_dssp             EEEEEEEECTT--SEEEEEEE-EEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHH
T ss_pred             hhhHHHHHhcC--CCCceEEE-eccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCccccc
Confidence            45799998863  34579999 9999999999999999999999999999988421            00          


Q ss_pred             ----cCCCCCcccccceEEEEEEecCCC-CCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccch
Q 021831           84 ----FEPLLPLILGRDISGEVAAVGASV-RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFA  158 (307)
Q Consensus        84 ----~~~~~p~~~G~e~~G~V~~~G~~v-~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~  158 (307)
                          ....+|.++|||++|+|+++|++| ++|++||||++...     |+|+||++++.+.++++|+++++++++++++.
T Consensus        82 ~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~~-----G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~  156 (379)
T 3iup_A           82 RSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIGG-----AMYSQYRCIPADQCLVLPEGATPADGASSFVN  156 (379)
T ss_dssp             HHHGGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECCS-----CCSBSEEEEEGGGEEECCTTCCHHHHTTSSHH
T ss_pred             cccccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecCC-----CcceeEEEeCHHHeEECCCCCCHHHHHhhhhh
Confidence                123578999999999999999999 89999999998765     99999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCCCEEEEEc-CCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCChhHHHHhc-
Q 021831          159 ALTAWRALKCAARMSEGQRLLVLG-GGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSKDIELAIK-  235 (307)
Q Consensus       159 ~~ta~~~l~~~~~~~~g~~VlI~G-a~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~-  235 (307)
                      .+|||++++. .. ++|++|||+| |+|++|++++|+|+.+|++|+++.++ ++.+.++++|+++++++++.++.+.+. 
T Consensus       157 ~~ta~~~~~~-~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~v~~  234 (379)
T 3iup_A          157 PLTALGMVET-MR-LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVHVCNAASPTFMQDLTE  234 (379)
T ss_dssp             HHHHHHHHHH-HH-HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTCSCEEETTSTTHHHHHHH
T ss_pred             HHHHHHHHHH-hc-cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCcEEEeCCChHHHHHHHH
Confidence            9999988864 44 8999999996 78999999999999999999999654 556778999999999999888776654 


Q ss_pred             ----CCccEEEECCCChhhHHHHHhccc-----CC-----------cEEEEeccCc
Q 021831          236 ----GKFDAVLDTIGAPETERLGLNFLK-----RG-----------GHYMTLHGET  271 (307)
Q Consensus       236 ----~~~dvvid~~g~~~~~~~~~~~l~-----~~-----------G~~v~~g~~~  271 (307)
                          .++|+||||+|+......++++++     ++           |+++.+|...
T Consensus       235 ~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~  290 (379)
T 3iup_A          235 ALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLD  290 (379)
T ss_dssp             HHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSE
T ss_pred             HhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCC
Confidence                379999999999767788888885     44           6666666543

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=8.5e-38  Score=279.03  Aligned_cols=219  Identities=32%  Similarity=0.458  Sum_probs=191.6

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||++++++++.+..  ++ +.+.|+|+++||+|||.++|||++|++++.|....  ...+|.++|||++|+|+       
T Consensus         1 Mka~~~~~~g~~~~--l~-~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~i~G~e~~G~V~-------   68 (302)
T 1iz0_A            1 MKAWVLKRLGGPLE--LV-DLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLT--RLHPPFIPGMEVVGVVE-------   68 (302)
T ss_dssp             CEEEEECSTTSCEE--EE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCCEEEEEET-------
T ss_pred             CeEEEEcCCCCchh--eE-ECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCCcccceEEEEEE-------
Confidence            79999998877643  45 78889999999999999999999999999984322  23579999999999998       


Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHH
Q 021831          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG  188 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G  188 (307)
                          ||||++...    +|+|+||+.++.+.++++|++++++++++++.+++|||+++.... +++|++|||+|++|++|
T Consensus        69 ----GdrV~~~~~----~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG  139 (302)
T 1iz0_A           69 ----GRRYAALVP----QGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALG  139 (302)
T ss_dssp             ----TEEEEEECS----SCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHH
T ss_pred             ----CcEEEEecC----CcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHH
Confidence                999998753    599999999999999999999999999999999999999998677 99999999999999999


Q ss_pred             HHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCC-hhHHHHhcCCccEEEECCCChhhHHHHHhcccCCcEEEE
Q 021831          189 FAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSS-KDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMT  266 (307)
Q Consensus       189 ~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~-~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~  266 (307)
                      ++++|+++.+|++|+++.++ ++.+.++++|+++++++++ .++.+.+ +++|++|| +|+. .+..++++++++|+++.
T Consensus       140 ~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~-~~~d~vid-~g~~-~~~~~~~~l~~~G~~v~  216 (302)
T 1iz0_A          140 TAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAW-GGLDLVLE-VRGK-EVEESLGLLAHGGRLVY  216 (302)
T ss_dssp             HHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHT-TSEEEEEE-CSCT-THHHHHTTEEEEEEEEE
T ss_pred             HHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHh-cCceEEEE-CCHH-HHHHHHHhhccCCEEEE
Confidence            99999999999999999764 5567788999999999887 6776666 68999999 9985 89999999999999999


Q ss_pred             eccCc
Q 021831          267 LHGET  271 (307)
Q Consensus       267 ~g~~~  271 (307)
                      +|...
T Consensus       217 ~g~~~  221 (302)
T 1iz0_A          217 IGAAE  221 (302)
T ss_dssp             C----
T ss_pred             EeCCC
Confidence            99754

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=9.6e-39  Score=317.60  Aligned_cols=230  Identities=27%  Similarity=0.339  Sum_probs=207.3

Q ss_pred             ceeEEEEcccCCCceeEEcCcccC--CCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecC
Q 021831           28 SCRAVVLPRFGGPEVLEVRPNVEV--PDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (307)
Q Consensus        28 ~~ka~~~~~~~~~~~~~~~~~~~~--p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~  105 (307)
                      ....+.+..+|.++.+++. +.+.  |+|++|||+|||.++|||++|+++..|.+      ..|.++|||++|+|+++|+
T Consensus       209 ~~~~l~~~~~G~~~~L~~~-~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~------~~~~~lG~E~aG~V~~vG~  281 (795)
T 3slk_A          209 TGWRLEATRPGSLDGLALV-DEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMY------PGVASLGSEGAGVVVETGP  281 (795)
T ss_dssp             SSCCEEESSTTSSTTEEEC-CCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCC------SSCCCSCCCEEEEEEEECS
T ss_pred             ceEEEecCCCCCccceEEE-eCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCC------CCCccccceeEEEEEEeCC
Confidence            4566788888999999999 7664  57899999999999999999999998843      2355799999999999999


Q ss_pred             CCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCc
Q 021831          106 SVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGG  185 (307)
Q Consensus       106 ~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g  185 (307)
                      +|++|++||||++...     |+|+||++++.+.++++|+++++++++.++++++|||+++.+.+++++|++|||+|++|
T Consensus       282 ~V~~~~vGDrV~~~~~-----G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaG  356 (795)
T 3slk_A          282 GVTGLAPGDRVMGMIP-----KAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAG  356 (795)
T ss_dssp             SCCSSCTTCEEEECCS-----SCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTB
T ss_pred             CCCcCCCCCEEEEEec-----CCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCC
Confidence            9999999999999866     99999999999999999999999999999999999999998789999999999999999


Q ss_pred             hHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccC
Q 021831          186 AVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKR  260 (307)
Q Consensus       186 ~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~  260 (307)
                      ++|++++|+|+.+|++|++++++++.+.++ +|+++++++.+.++.+.+.     .++|+|||++|+. .+..++++|++
T Consensus       357 gvG~~aiqlAk~~Ga~V~~t~~~~k~~~l~-lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~gg~-~~~~~l~~l~~  434 (795)
T 3slk_A          357 GVGMAAIQLARHLGAEVYATASEDKWQAVE-LSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGE-FADASLRMLPR  434 (795)
T ss_dssp             HHHHHHHHHHHHTTCCEEEECCGGGGGGSC-SCGGGEECSSSSTHHHHHHHHSCSSCCSEEEECCCTT-TTHHHHTSCTT
T ss_pred             HHHHHHHHHHHHcCCEEEEEeChHHhhhhh-cChhheeecCChhHHHHHHHHcCCCCeEEEEECCCcH-HHHHHHHHhcC
Confidence            999999999999999999998776555555 9999999999888877664     3899999999987 88999999999


Q ss_pred             CcEEEEeccCc
Q 021831          261 GGHYMTLHGET  271 (307)
Q Consensus       261 ~G~~v~~g~~~  271 (307)
                      +|+++.+|...
T Consensus       435 ~Gr~v~iG~~~  445 (795)
T 3slk_A          435 GGRFLELGKTD  445 (795)
T ss_dssp             CEEEEECCSTT
T ss_pred             CCEEEEecccc
Confidence            99999999764

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=5.1e-37  Score=281.10  Aligned_cols=229  Identities=18%  Similarity=0.199  Sum_probs=191.7

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCC-CeEEEEEeeeecChhhHHHHhC--CCccccCCCC---CcccccceEEEEEE
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKP-NEVLVRTRAVSINPLDTRMRSG--YGRSIFEPLL---PLILGRDISGEVAA  102 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~-~eVlV~v~~~~i~~~D~~~~~g--~~~~~~~~~~---p~~~G~e~~G~V~~  102 (307)
                      ||+++++.++.+  ++++ +.+.|+|++ +||+|||.++|||++|++++.|  ...   ...+   |.++|||++|+|++
T Consensus         1 MkA~~~~~~g~~--l~~~-~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~---~~~~~~~p~v~G~E~~G~V~~   74 (366)
T 2cdc_A            1 MKAIIVKPPNAG--VQVK-DVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLS---TLPKGKDFLVLGHEAIGVVEE   74 (366)
T ss_dssp             CEEEEECTTSCC--CEEE-ECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC----------CCSCEECCSEEEEEECS
T ss_pred             CeEEEEeCCCCc--eEEE-ECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCC---CCCcCCCCCcCCcceEEEEEe
Confidence            799999987753  8888 899999999 9999999999999999999988  322   1345   89999999999999


Q ss_pred             ecCCCCCCCCCCEEEEecC-------------------------CCC-CCCcceeEEEecCCceeeCCCCCChhhhcccc
Q 021831          103 VGASVRSLTVGQEVFGALH-------------------------PTA-VRGTYADYAVLSEDELTPKPVSVTHADASAIP  156 (307)
Q Consensus       103 ~G~~v~~~~~Gd~V~~~~~-------------------------~~~-~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~  156 (307)
                        ++ ++|++||||++...                         +.. .+|+|+||++++.+.++++|++++ ++++ ++
T Consensus        75 --~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~Aa-l~  149 (366)
T 2cdc_A           75 --SY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGI-LA  149 (366)
T ss_dssp             --CC-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-TTGG-GH
T ss_pred             --CC-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-hhhh-hc
Confidence              77 89999999987531                         111 359999999999999999999999 7765 66


Q ss_pred             chHHHHHHHHH--H--HcCCC--C-------CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc----cHHHHHHcCC
Q 021831          157 FAALTAWRALK--C--AARMS--E-------GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK----SIDRVLAAGA  219 (307)
Q Consensus       157 ~~~~ta~~~l~--~--~~~~~--~-------g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~----~~~~~~~~g~  219 (307)
                      .++.|||+++.  .  ..+++  +       |++|||+|+ |++|++++|+++.+|++|+++.+++    +.+.++++|+
T Consensus       150 ~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga  228 (366)
T 2cdc_A          150 QPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKT  228 (366)
T ss_dssp             HHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTC
T ss_pred             CcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCC
Confidence            79999999997  5  77888  8       999999998 9999999999999999999997764    5567889999


Q ss_pred             ceEEeCCChhHHHHh---cCCccEEEECCCChhhH-HHHHhcccCCcEEEEeccCcc
Q 021831          220 EQAVDYSSKDIELAI---KGKFDAVLDTIGAPETE-RLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       220 ~~v~~~~~~~~~~~~---~~~~dvvid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      +++ + .+ ++.+.+   .+++|++||++|+...+ ..++++|+++|+++.+|....
T Consensus       229 ~~v-~-~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~  282 (366)
T 2cdc_A          229 NYY-N-SS-NGYDKLKDSVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTS  282 (366)
T ss_dssp             EEE-E-CT-TCSHHHHHHHCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCS
T ss_pred             cee-c-hH-HHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCC
Confidence            988 7 54 433322   26899999999997677 899999999999999997643

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=7.6e-36  Score=269.91  Aligned_cols=228  Identities=21%  Similarity=0.291  Sum_probs=193.7

Q ss_pred             ccceeEEEEccc--CC--CceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEE
Q 021831           26 TTSCRAVVLPRF--GG--PEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVA  101 (307)
Q Consensus        26 ~~~~ka~~~~~~--~~--~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~  101 (307)
                      +++||+|+++++  |.  ++.++++ +.+.|+|++|||+|||.++|||+.|..+ .+      +...|.++|||++|+|+
T Consensus         5 ~~~mka~~~~~~~~g~~~~~~l~~~-e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~~------~~~~p~~~g~e~~G~Vv   76 (333)
T 1v3u_A            5 MVKAKSWTLKKHFQGKPTQSDFELK-TVELPPLKNGEVLLEALFLSVDPYMRIA-SK------RLKEGAVMMGQQVARVV   76 (333)
T ss_dssp             CCEEEEEEECC-----CCGGGEEEE-EEECCCCCTTCEEEEEEEEECCTHHHHH-TT------TCCTTSBCCCCEEEEEE
T ss_pred             cccccEEEEeecCCCCCCccceEEE-eCCCCCCCCCEEEEEEEEeccCHHHccc-cC------cCCCCcccccceEEEEE
Confidence            456999999985  43  3779999 9999999999999999999999998732 11      23567889999999999


Q ss_pred             EecCCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCC----CChhh-hccccchHHHHHHHHHHHcCCCCCC
Q 021831          102 AVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVS----VTHAD-ASAIPFAALTAWRALKCAARMSEGQ  176 (307)
Q Consensus       102 ~~G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~----~~~~~-aa~~~~~~~ta~~~l~~~~~~~~g~  176 (307)
                      +.  ++++|++||||++.       |+|+||+.++.+.++++|++    +++++ +++++.+++|||+++.+..++++|+
T Consensus        77 ~~--~v~~~~vGdrV~~~-------g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~  147 (333)
T 1v3u_A           77 ES--KNSAFPAGSIVLAQ-------SGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGE  147 (333)
T ss_dssp             EE--SCTTSCTTCEEEEC-------CCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSC
T ss_pred             ec--CCCCCCCCCEEEec-------CceEEEEEechHHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCC
Confidence            95  67899999999875       89999999999999999997    88887 4888899999999997788999999


Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCC-hhHHHHhc----CCccEEEECCCChhh
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSS-KDIELAIK----GKFDAVLDTIGAPET  250 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~-~~~~~~~~----~~~dvvid~~g~~~~  250 (307)
                      +|||+|++|++|++++++++..|++|+++.++ ++.+.++++|+++++|+++ .++.+.+.    +++|++||++|+. .
T Consensus       148 ~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~  226 (333)
T 1v3u_A          148 TVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGE-F  226 (333)
T ss_dssp             EEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCHH-H
T ss_pred             EEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCChH-H
Confidence            99999999999999999999999999998765 4456678899999999887 56555443    4799999999987 7


Q ss_pred             HHHHHhcccCCcEEEEeccCc
Q 021831          251 ERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +..++++++++|+++.+|...
T Consensus       227 ~~~~~~~l~~~G~~v~~g~~~  247 (333)
T 1v3u_A          227 LNTVLSQMKDFGKIAICGAIS  247 (333)
T ss_dssp             HHHHHTTEEEEEEEEECCCCC
T ss_pred             HHHHHHHHhcCCEEEEEeccc
Confidence            899999999999999999653

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=8.9e-36  Score=270.69  Aligned_cols=237  Identities=21%  Similarity=0.297  Sum_probs=193.3

Q ss_pred             cccceeEEEEccc--CCCc--eeEEcC-cccCCC-CCCCeEEEEEeeeecChhhHHHHhCCCcccc-CCCCCcccccceE
Q 021831           25 VTTSCRAVVLPRF--GGPE--VLEVRP-NVEVPD-LKPNEVLVRTRAVSINPLDTRMRSGYGRSIF-EPLLPLILGRDIS   97 (307)
Q Consensus        25 ~~~~~ka~~~~~~--~~~~--~~~~~~-~~~~p~-~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~-~~~~p~~~G~e~~   97 (307)
                      ||.+||+++++..  +.++  .+++++ +.+.|. |++|||+|||.++|+++.|. ...|...... ...+|+++|||++
T Consensus         1 m~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~   79 (345)
T 2j3h_A            1 MTATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQ   79 (345)
T ss_dssp             CEEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCE
T ss_pred             CCccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeee
Confidence            5678999999987  6665  688762 566775 89999999999999988875 4455321100 1246889999999


Q ss_pred             EEEEE--ecCCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCc--eeeCCC---CCChhhhccccchHHHHHHHHHHHc
Q 021831           98 GEVAA--VGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDE--LTPKPV---SVTHADASAIPFAALTAWRALKCAA  170 (307)
Q Consensus        98 G~V~~--~G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~--~~~ip~---~~~~~~aa~~~~~~~ta~~~l~~~~  170 (307)
                      |++++  +|+++++|++||||++.       |+|+||+.++.+.  ++++|+   +++++ +++++.+++|||+++.+.+
T Consensus        80 G~~~~GvV~~~v~~~~vGdrV~~~-------g~~aey~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~  151 (345)
T 2j3h_A           80 GYGVSRIIESGHPDYKKGDLLWGI-------VAWEEYSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVC  151 (345)
T ss_dssp             EEEEEEEEEECSTTCCTTCEEEEE-------EESBSEEEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTS
T ss_pred             cceEEEEEecCCCCCCCCCEEEee-------cCceeEEEecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHh
Confidence            99999  99999999999999876       8999999999876  999996   35555 6778889999999997788


Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHH-HcCCceEEeCCCh-hHHHHhc----CCccEEEE
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVL-AAGAEQAVDYSSK-DIELAIK----GKFDAVLD  243 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~-~~g~~~v~~~~~~-~~~~~~~----~~~dvvid  243 (307)
                      ++++|++|||+|++|++|++++|+++..|++|+++.+++ +.+.++ ++|+++++|+.+. ++.+.+.    +++|++||
T Consensus       152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~  231 (345)
T 2j3h_A          152 SPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFE  231 (345)
T ss_dssp             CCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEE
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEE
Confidence            999999999999999999999999999999999987654 456676 7999999998753 4443332    47999999


Q ss_pred             CCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          244 TIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       244 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ++|+. .+..++++++++|+++.+|...
T Consensus       232 ~~g~~-~~~~~~~~l~~~G~~v~~G~~~  258 (345)
T 2j3h_A          232 NVGGK-MLDAVLVNMNMHGRIAVCGMIS  258 (345)
T ss_dssp             SSCHH-HHHHHHTTEEEEEEEEECCCGG
T ss_pred             CCCHH-HHHHHHHHHhcCCEEEEEcccc
Confidence            99986 8899999999999999998653

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.95  E-value=5.7e-27  Score=255.05  Aligned_cols=223  Identities=21%  Similarity=0.259  Sum_probs=187.8

Q ss_pred             EEEcccCCCceeEEcCcccCCC-CC--CCeEEEEEeeeecChhhHHHHhCCCcccc----CCCCCcccccceEEEEEEec
Q 021831           32 VVLPRFGGPEVLEVRPNVEVPD-LK--PNEVLVRTRAVSINPLDTRMRSGYGRSIF----EPLLPLILGRDISGEVAAVG  104 (307)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~~p~-~~--~~eVlV~v~~~~i~~~D~~~~~g~~~~~~----~~~~p~~~G~e~~G~V~~~G  104 (307)
                      +....+|..+.+.+. +.+... +.  ++||+|+|.++|+|+.|+.+..|......    ....|.++|+|++|+|    
T Consensus      1533 l~~~~~g~l~sl~~~-~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V---- 1607 (2512)
T 2vz8_A         1533 VNVLSRGDLSSIRWV-CSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRD---- 1607 (2512)
T ss_dssp             EEESSTTCTTSEEEE-ECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEE----
T ss_pred             EEccCCCCcCceEEE-ecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEE----
Confidence            445556666778887 555433 33  78999999999999999999998543211    1234678999999987    


Q ss_pred             CCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCC
Q 021831          105 ASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGG  184 (307)
Q Consensus       105 ~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~  184 (307)
                            .+||+|+++..    +|+|++|++++.+.++++|++++++++++++++++|||+++...+++++|++|||+||+
T Consensus      1608 ------~vGdrV~g~~~----~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaa 1677 (2512)
T 2vz8_A         1608 ------ASGRRVMGMVP----AEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGS 1677 (2512)
T ss_dssp             ------TTSCCEEEECS----SCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTT
T ss_pred             ------ccCCEEEEeec----CCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCC
Confidence                  37999998864    49999999999999999999999999999999999999999878899999999999999


Q ss_pred             chHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHH----cCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHH
Q 021831          185 GAVGFAAVQFSVASGCHVSATCGSK-SIDRVLA----AGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLG  254 (307)
Q Consensus       185 g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~----~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~  254 (307)
                      |++|++++|+|+.+|++|+++++++ +.+.+++    +|+++++++++.++.+.+.     .++|+|||++++. .+..+
T Consensus      1678 GgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~g~~-~l~~~ 1756 (2512)
T 2vz8_A         1678 GGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEE-KLQAS 1756 (2512)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCCEEEEEECCCHH-HHHHH
T ss_pred             hHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCCceEEEECCCch-HHHHH
Confidence            9999999999999999999997654 4556664    7889999998888776654     3799999999865 89999


Q ss_pred             HhcccCCcEEEEeccC
Q 021831          255 LNFLKRGGHYMTLHGE  270 (307)
Q Consensus       255 ~~~l~~~G~~v~~g~~  270 (307)
                      +++++++|+++.+|..
T Consensus      1757 l~~L~~~Gr~V~iG~~ 1772 (2512)
T 2vz8_A         1757 VRCLAQHGRFLEIGKF 1772 (2512)
T ss_dssp             HTTEEEEEEEEECCCH
T ss_pred             HHhcCCCcEEEEeecc
Confidence            9999999999999964

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.78  E-value=7.4e-19  Score=146.64  Aligned_cols=133  Identities=29%  Similarity=0.456  Sum_probs=105.0

Q ss_pred             CceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHH
Q 021831          138 DELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLA  216 (307)
Q Consensus       138 ~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~  216 (307)
                      +.++++|+++++++++.++.++.|||+++.+..++++|++|||+|++|++|++++++++..|++|+++.++++ .+.+++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~   81 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR   81 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            4678999999999999999999999999987789999999999999999999999999999999999876654 456778


Q ss_pred             cCCceEEeCCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          217 AGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       217 ~g~~~v~~~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +|+++++++++.++.+.+.     +++|++||++|.. .+..++++|+++|+++.+|...
T Consensus        82 ~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~  140 (198)
T 1pqw_A           82 LGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGE-AIQRGVQILAPGGRFIELGKKD  140 (198)
T ss_dssp             TCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCTH-HHHHHHHTEEEEEEEEECSCGG
T ss_pred             cCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCchH-HHHHHHHHhccCCEEEEEcCCC
Confidence            8998888887766544432     3699999999876 8899999999999999999754

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.64  E-value=2e-10  Score=105.84  Aligned_cols=174  Identities=16%  Similarity=0.145  Sum_probs=120.0

Q ss_pred             cccccceEEEEEEecCCCCCCCCCCEEEEec-----CCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHH
Q 021831           90 LILGRDISGEVAAVGASVRSLTVGQEVFGAL-----HPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (307)
Q Consensus        90 ~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~-----~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (307)
                      ...|++.++.|..+|++++.+.+|+.++.-.     ......|++.+|+......++.+|+.++...++. ..+..++|.
T Consensus        75 ~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~-~~~~s~a~~  153 (404)
T 1gpj_A           75 VKRGSEAVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGTLDEALKIVFRRAINLGKRAREETRIS-EGAVSIGSA  153 (404)
T ss_dssp             EEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHSSTT-CSCCSHHHH
T ss_pred             eecCchHhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCCchHHHHHHHHHHhhhhccCcchhhhc-CCCccHHHH
Confidence            4579999999999999999999999863100     0000126677887777777888888877666554 335556777


Q ss_pred             HHHHHc---CCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCccH--HHHHHcCCceEEeCCChhHHHHhcCCc
Q 021831          165 ALKCAA---RMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKF  238 (307)
Q Consensus       165 ~l~~~~---~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~~~~~~  238 (307)
                      ++....   .-.+|++|+|+|+ |.+|.++++.++..|+ +|+++.++.+.  +.++++|++ ++++  .++.+.+ .++
T Consensus       154 av~~a~~~~~~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~--~~l~~~l-~~a  228 (404)
T 1gpj_A          154 AVELAERELGSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRF--DELVDHL-ARS  228 (404)
T ss_dssp             HHHHHHHHHSCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCG--GGHHHHH-HTC
T ss_pred             HHHHHHHHhccccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-eecH--HhHHHHh-cCC
Confidence            664222   1247999999996 9999999999999999 89888776543  456778875 3333  2444443 469


Q ss_pred             cEEEECCCChhhHH--HHHhc--c--cCCcEEEEecc
Q 021831          239 DAVLDTIGAPETER--LGLNF--L--KRGGHYMTLHG  269 (307)
Q Consensus       239 dvvid~~g~~~~~~--~~~~~--l--~~~G~~v~~g~  269 (307)
                      |+||+++|....+.  ..+..  +  +++|.++.++.
T Consensus       229 DvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdi  265 (404)
T 1gpj_A          229 DVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDI  265 (404)
T ss_dssp             SEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEEC
T ss_pred             CEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEc
Confidence            99999998753321  34444  3  55666666654

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=98.50  E-value=1e-06  Score=76.44  Aligned_cols=133  Identities=19%  Similarity=0.239  Sum_probs=92.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HH-HHHHcCCceE---EeCCChh-HH---HHhc---CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-ID-RVLAAGAEQA---VDYSSKD-IE---LAIK---GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~-~~~~~g~~~v---~~~~~~~-~~---~~~~---~~~dvv  241 (307)
                      .|+.+||+||++++|++.++.+...|++|+.+.++++ .+ .+++++....   .|.++.+ ..   +.+.   +++|++
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL  107 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVL  107 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5889999999999999999999999999998877654 22 3556664322   2444432 22   2221   789999


Q ss_pred             EECCCChh-------------------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHHHHHHHHHHH
Q 021831          242 LDTIGAPE-------------------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM  296 (307)
Q Consensus       242 id~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (307)
                      +++.|...                         ....++..|+++|.+|.++.............++....+...+.+.+
T Consensus       108 VNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~~~Y~asKaav~~ltr~l  187 (273)
T 4fgs_A          108 FVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNW  187 (273)
T ss_dssp             EECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCchHHHHHHHHHHHHHHHH
Confidence            99998510                         12567778889999999998766555555555666666666565554


Q ss_pred             h-hhhcccccc
Q 021831          297 Q-TWYSYGIGC  306 (307)
Q Consensus       297 ~-~~~~~~i~~  306 (307)
                      . .+.++||+|
T Consensus       188 A~Ela~~gIrV  198 (273)
T 4fgs_A          188 ILDLKDRGIRI  198 (273)
T ss_dssp             HHHTTTSCEEE
T ss_pred             HHHhcccCeEE
Confidence            4 667888886

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.46  E-value=4.2e-07  Score=82.34  Aligned_cols=95  Identities=18%  Similarity=0.264  Sum_probs=72.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCce--EEeCCChhHHHHhcCCccEEEECCCChhh-
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQ--AVDYSSKDIELAIKGKFDAVLDTIGAPET-  250 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~--v~~~~~~~~~~~~~~~~dvvid~~g~~~~-  250 (307)
                      +++|+|+|+ |++|+++++.++.+|++|+++.++. +.+.+++++...  +++.+..++.+.+ .++|+||||++.... 
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~DvVI~~~~~~~~~  244 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAV-AEADLLIGAVLVPGRR  244 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHH-HTCSEEEECCCCTTSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHH-cCCCEEEECCCcCCCC
Confidence            489999997 9999999999999999988886654 445566655433  4444444555544 369999999987532 


Q ss_pred             -----HHHHHhcccCCcEEEEeccCc
Q 021831          251 -----ERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       251 -----~~~~~~~l~~~G~~v~~g~~~  271 (307)
                           ....+..++++|+++.++...
T Consensus       245 ~~~li~~~~~~~~~~g~~ivdv~~~~  270 (361)
T 1pjc_A          245 APILVPASLVEQMRTGSVIVDVAVDQ  270 (361)
T ss_dssp             CCCCBCHHHHTTSCTTCEEEETTCTT
T ss_pred             CCeecCHHHHhhCCCCCEEEEEecCC
Confidence                 566788999999999998653

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=98.35  E-value=5.5e-06  Score=71.14  Aligned_cols=133  Identities=20%  Similarity=0.268  Sum_probs=88.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-----HHHHHcCCceE---EeCCChh-HHH---Hhc---CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQA---VDYSSKD-IEL---AIK---GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-----~~~~~~g~~~v---~~~~~~~-~~~---~~~---~~~  238 (307)
                      .|+.+||+||++++|++.++.+...|++|+...++++.     +.+++.|.+..   .|.++++ ..+   .+.   ++.
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV   87 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            58999999999999999999999999999988665432     22344454322   2333432 222   221   689


Q ss_pred             cEEEECCCChh-------------------------hHHHHHhcc---cCCcEEEEeccCcccccccccceechhHHHHH
Q 021831          239 DAVLDTIGAPE-------------------------TERLGLNFL---KRGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       239 dvvid~~g~~~-------------------------~~~~~~~~l---~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      |+++++.|...                         ....++..|   +.+|++|.++.............++.......
T Consensus        88 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~  167 (255)
T 4g81_D           88 DILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIK  167 (255)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHHHHHH
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHHHHHH
Confidence            99999998410                         124455556   25699999998776555555555666666666


Q ss_pred             HHHHHHh-hhhcccccc
Q 021831          291 LLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~-~~~~~~i~~  306 (307)
                      .+.+.+. .+.++||+|
T Consensus       168 ~ltr~lA~ela~~gIrV  184 (255)
T 4g81_D          168 MLTCSMAAEWAQFNIQT  184 (255)
T ss_dssp             HHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHhcccCeEE
Confidence            5655554 667888986

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=98.34  E-value=5.4e-06  Score=71.15  Aligned_cols=133  Identities=16%  Similarity=0.220  Sum_probs=88.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HH----HHHHcCCceE---EeCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-ID----RVLAAGAEQA---VDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~----~~~~~g~~~v---~~~~~~~-~~~~~~------~~~  238 (307)
                      +|+.+||+||++++|.+.++.+...|++|+.+.++++ .+    .+++.|.+..   .|.++++ ..+.+.      ++.
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   85 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI   85 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4889999999999999999998899999988876543 22    2345565422   2444432 222121      789


Q ss_pred             cEEEECCCCh---h-----------------------hHHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHH
Q 021831          239 DAVLDTIGAP---E-----------------------TERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       239 dvvid~~g~~---~-----------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      |+++++.|..   .                       ....++..|  +.+|++|.++.............+........
T Consensus        86 DiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asKaal~  165 (254)
T 4fn4_A           86 DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLI  165 (254)
T ss_dssp             CEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHHHHHH
T ss_pred             CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHHHHHH
Confidence            9999998831   0                       014555555  34799999998776555555555666666666


Q ss_pred             HHHHHHh-hhhcccccc
Q 021831          291 LLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~-~~~~~~i~~  306 (307)
                      .+.+.+. .+.++||+|
T Consensus       166 ~ltr~lA~ela~~gIrV  182 (254)
T 4fn4_A          166 GLTRSIAAHYGDQGIRA  182 (254)
T ss_dssp             HHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHhhhhCeEE
Confidence            5555554 667888886

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=98.30  E-value=4.6e-06  Score=71.00  Aligned_cols=134  Identities=17%  Similarity=0.260  Sum_probs=88.8

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCC---ceEEeCCChh-HHHHhc--CCccEEEECC
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGA---EQAVDYSSKD-IELAIK--GKFDAVLDTI  245 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~---~~v~~~~~~~-~~~~~~--~~~dvvid~~  245 (307)
                      +-.|+++||+||++++|++.++.+...|++|+...++++... ...+.   ....|.++++ ..+.+.  ++.|+++++.
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~-~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNA   86 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVH-APRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNA   86 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTT-SCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHh-hhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECC
Confidence            446999999999999999999999999999998866543211 11111   1223444433 222222  7899999999


Q ss_pred             CChh-----------------------hHHHHHhccc-CCcEEEEeccCcccccccccceechhHHHHHHHHHHHh-hhh
Q 021831          246 GAPE-----------------------TERLGLNFLK-RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ-TWY  300 (307)
Q Consensus       246 g~~~-----------------------~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  300 (307)
                      |...                       ....++..|+ .+|++|.++.............+.........+.+.+. .+.
T Consensus        87 Gi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela  166 (242)
T 4b79_A           87 GISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYA  166 (242)
T ss_dssp             CCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence            8421                       1134455554 58999999987665555555556666666666666655 667


Q ss_pred             cccccc
Q 021831          301 SYGIGC  306 (307)
Q Consensus       301 ~~~i~~  306 (307)
                      ++||+|
T Consensus       167 ~~gIrV  172 (242)
T 4b79_A          167 AERIRV  172 (242)
T ss_dssp             GGTEEE
T ss_pred             hcCeEE
Confidence            888986

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=98.27  E-value=2.4e-05  Score=67.17  Aligned_cols=133  Identities=14%  Similarity=0.176  Sum_probs=85.5

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCC--ceE--EeCCChh-HHHHhc------
Q 021831          174 EGQRLLVLGGGG--AVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGA--EQA--VDYSSKD-IELAIK------  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g--~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~--~~v--~~~~~~~-~~~~~~------  235 (307)
                      .|+++||+||+|  ++|++.++.+...|++|+.+.++++ .+.    +++.+.  ...  .|.++++ ..+.+.      
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV   84 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            488999999865  8999999999999999998877643 222    233442  222  2444432 222121      


Q ss_pred             CCccEEEECCCCh--------------hh---------------HHHHHhcccCCcEEEEeccCcccccccccceechhH
Q 021831          236 GKFDAVLDTIGAP--------------ET---------------ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPI  286 (307)
Q Consensus       236 ~~~dvvid~~g~~--------------~~---------------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  286 (307)
                      +++|+++++.|..              +.               ...+...++.+|++|.++.............++...
T Consensus        85 G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~~~Y~asK  164 (256)
T 4fs3_A           85 GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAK  164 (256)
T ss_dssp             CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTTHHHHHHH
T ss_pred             CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccchhhHHHH
Confidence            7899999998731              00               123445677899999999876654444444455555


Q ss_pred             HHHHHHHHHHh-hhhcccccc
Q 021831          287 ATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       287 ~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      .+...+.+.+. .+.++||+|
T Consensus       165 aal~~ltr~lA~Ela~~gIrV  185 (256)
T 4fs3_A          165 ASLEANVKYLALDLGPDNIRV  185 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHHHHhCccCeEE
Confidence            55555555544 667888986

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.26  E-value=3.7e-06  Score=78.75  Aligned_cols=158  Identities=19%  Similarity=0.165  Sum_probs=103.1

Q ss_pred             CCcccccceEEEEEEecCCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHH
Q 021831           88 LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK  167 (307)
Q Consensus        88 ~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~  167 (307)
                      +|.++ +++.|+|+++|.+|+++.      ...    ..|.+......-.+.+.+   ..    .-.+.....++|+++.
T Consensus       204 ~p~~~-~~i~GvveetgtGVd~l~------a~~----~~Gilv~~~~~vn~sVae---~~----~r~l~~~~~s~~~g~~  265 (494)
T 3ce6_A          204 WTKIA-ESVKGVTEETTTGVLRLY------QFA----AAGDLAFPAINVNDSVTK---SK----FDNKYGTRHSLIDGIN  265 (494)
T ss_dssp             HHHHH-HHCCCEEECSHHHHHHHH------HHH----HTTCCCSCEEECTTSHHH---HT----THHHHHHHHHHHHHHH
T ss_pred             chhhh-cCeEEEEEEeCCChhHHH------HHH----HcCCEEEecCCccHHHHH---HH----HhhhhhhhhhhhHHHH
Confidence            45556 899999999999887651      000    012222211111111111   00    0011223455667665


Q ss_pred             HHcC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECC
Q 021831          168 CAAR-MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTI  245 (307)
Q Consensus       168 ~~~~-~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~  245 (307)
                      .... ..+|++|+|+|. |.+|+.+++.++.+|++|+++.++. +...++++|++ +.     ++.+.+ .++|+||+++
T Consensus       266 r~~~~~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~-~~-----~l~e~l-~~aDvVi~at  337 (494)
T 3ce6_A          266 RGTDALIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFD-VV-----TVEEAI-GDADIVVTAT  337 (494)
T ss_dssp             HHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-EC-----CHHHHG-GGCSEEEECS
T ss_pred             hccCCCCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCE-Ee-----cHHHHH-hCCCEEEECC
Confidence            3332 678999999995 9999999999999999999886654 34567788875 32     233333 4699999999


Q ss_pred             CChhhHH-HHHhcccCCcEEEEeccCc
Q 021831          246 GAPETER-LGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       246 g~~~~~~-~~~~~l~~~G~~v~~g~~~  271 (307)
                      |+...+. ..+..|+++|+++.+|...
T Consensus       338 gt~~~i~~~~l~~mk~ggilvnvG~~~  364 (494)
T 3ce6_A          338 GNKDIIMLEHIKAMKDHAILGNIGHFD  364 (494)
T ss_dssp             SSSCSBCHHHHHHSCTTCEEEECSSSG
T ss_pred             CCHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence            9875555 7889999999999999753

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.26  E-value=2.6e-06  Score=77.28  Aligned_cols=96  Identities=18%  Similarity=0.303  Sum_probs=68.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHH-cCCceEEeCCC-hhHHHHhcCCccEEEECCCChhh
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLA-AGAEQAVDYSS-KDIELAIKGKFDAVLDTIGAPET  250 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~-~g~~~v~~~~~-~~~~~~~~~~~dvvid~~g~~~~  250 (307)
                      ++++|+|+|+ |.+|+.+++.++.+|++|++..++. +.+.+++ +|.....+... .++.+.+ .++|+||++++....
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~-~~~DvVi~~~g~~~~  242 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSV-QHADLLIGAVLVPGA  242 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHH-HHCSEEEECCC----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHH-hCCCEEEECCCCCcc
Confidence            4689999997 9999999999999999999886654 3444544 67653333332 3444443 469999999997631


Q ss_pred             ------HHHHHhcccCCcEEEEeccCc
Q 021831          251 ------ERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       251 ------~~~~~~~l~~~G~~v~~g~~~  271 (307)
                            ...++..|+++|.++.++...
T Consensus       243 ~~~~li~~~~l~~mk~gg~iV~v~~~~  269 (369)
T 2eez_A          243 KAPKLVTRDMLSLMKEGAVIVDVAVDQ  269 (369)
T ss_dssp             ---CCSCHHHHTTSCTTCEEEECC---
T ss_pred             ccchhHHHHHHHhhcCCCEEEEEecCC
Confidence                  567889999999999998653

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.26  E-value=2.3e-06  Score=77.94  Aligned_cols=94  Identities=18%  Similarity=0.250  Sum_probs=70.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHH-cCCceEEe-CCChhHHHHhcCCccEEEECCCChhh
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLA-AGAEQAVD-YSSKDIELAIKGKFDAVLDTIGAPET  250 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~-~g~~~v~~-~~~~~~~~~~~~~~dvvid~~g~~~~  250 (307)
                      +|++|+|+|+ |.+|+.+++.++.+|++|++..++.+ .+.+++ +|.....+ ....++.+.+ .++|+||+|++.+..
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l-~~aDvVi~~~~~p~~  244 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAV-KRADLVIGAVLVPGA  244 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHH-HHCSEEEECCCCTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHH-cCCCEEEECCCcCCC
Confidence            5899999996 99999999999999999988866543 445554 67653232 2333444443 458999999986632


Q ss_pred             ------HHHHHhcccCCcEEEEecc
Q 021831          251 ------ERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       251 ------~~~~~~~l~~~G~~v~~g~  269 (307)
                            ....+..|+++|.++.++.
T Consensus       245 ~t~~li~~~~l~~mk~g~~iV~va~  269 (377)
T 2vhw_A          245 KAPKLVSNSLVAHMKPGAVLVDIAI  269 (377)
T ss_dssp             CCCCCBCHHHHTTSCTTCEEEEGGG
T ss_pred             CCcceecHHHHhcCCCCcEEEEEec
Confidence                  5778899999999999984

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=98.25  E-value=1.2e-05  Score=68.62  Aligned_cols=133  Identities=19%  Similarity=0.231  Sum_probs=88.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH---HHHHHcCCceE---EeCCChhHHHH-hc-CCccEEEECC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAGAEQA---VDYSSKDIELA-IK-GKFDAVLDTI  245 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~---~~~~~~g~~~v---~~~~~~~~~~~-~~-~~~dvvid~~  245 (307)
                      .|+.+||+||++++|++.++.+...|++|+...+....   +.+++.|.+..   .|.+++...+. .. +++|+++++.
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNA   87 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNA   87 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECC
Confidence            48999999999999999999999999999888765432   33555665422   23333322222 12 5799999999


Q ss_pred             CChh-------------------------hHHHHHhcc-c--CCcEEEEeccCcccccccccceechhHHHHHHHHHHHh
Q 021831          246 GAPE-------------------------TERLGLNFL-K--RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ  297 (307)
Q Consensus       246 g~~~-------------------------~~~~~~~~l-~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (307)
                      |...                         ....++..| +  .+|++|.++.............+.........+.+.+.
T Consensus        88 Gi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav~~ltr~lA  167 (247)
T 4hp8_A           88 GIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLA  167 (247)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHHHHHHHHHH
Confidence            8410                         113445544 2  46999999987665554455555556666555555554


Q ss_pred             -hhhcccccc
Q 021831          298 -TWYSYGIGC  306 (307)
Q Consensus       298 -~~~~~~i~~  306 (307)
                       .+.++||+|
T Consensus       168 ~Ela~~gIrV  177 (247)
T 4hp8_A          168 NEWAAKGINV  177 (247)
T ss_dssp             HHHGGGTEEE
T ss_pred             HHHhhcCeEE
Confidence             678889986

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=98.22  E-value=2.2e-05  Score=67.01  Aligned_cols=132  Identities=14%  Similarity=0.107  Sum_probs=88.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HHHHHcCCc-eE--EeCCChh-HHHHhc------CCccEEEE
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAE-QA--VDYSSKD-IELAIK------GKFDAVLD  243 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~~~~g~~-~v--~~~~~~~-~~~~~~------~~~dvvid  243 (307)
                      +++|||+||++++|++.++.+...|++|+.+.++++. ..+.+.+.. ..  .|.++++ ..+.+.      +++|++++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN   81 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN   81 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            3689999999999999999999999999988765442 333333322 22  2344432 222111      78999999


Q ss_pred             CCCChh----------h---------------HHHHHhcc-cCCcEEEEeccCcccccccccceechhHHHHHHHHHHHh
Q 021831          244 TIGAPE----------T---------------ERLGLNFL-KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ  297 (307)
Q Consensus       244 ~~g~~~----------~---------------~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (307)
                      +.|...          .               ...++..| +.+|++|.++.............+.........+.+.+.
T Consensus        82 NAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~~~Y~asKaal~~ltk~lA  161 (247)
T 3ged_A           82 NACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALA  161 (247)
T ss_dssp             CCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            987410          0               12344444 467999999987766566666667777777777777777


Q ss_pred             hhhcccccc
Q 021831          298 TWYSYGIGC  306 (307)
Q Consensus       298 ~~~~~~i~~  306 (307)
                      ....++|+|
T Consensus       162 ~ela~~IrV  170 (247)
T 3ged_A          162 MSLGPDVLV  170 (247)
T ss_dssp             HHHTTTSEE
T ss_pred             HHHCCCCEE
Confidence            655668875

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=98.21  E-value=1.5e-05  Score=67.69  Aligned_cols=100  Identities=16%  Similarity=0.091  Sum_probs=69.9

Q ss_pred             HHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHH----HcCC-c--eEEeCCChhHHHHh-
Q 021831          164 RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVL----AAGA-E--QAVDYSSKDIELAI-  234 (307)
Q Consensus       164 ~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~----~~g~-~--~v~~~~~~~~~~~~-  234 (307)
                      +.+ ....++++++||..|+ | .|..+..+++. +.+|+++..++ ..+.++    ..+. .  .+...   ++.+.. 
T Consensus        82 ~~~-~~~~~~~~~~vldiG~-G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~---d~~~~~~  154 (248)
T 2yvl_A           82 YIA-LKLNLNKEKRVLEFGT-G-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNV---DFKDAEV  154 (248)
T ss_dssp             HHH-HHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECS---CTTTSCC
T ss_pred             HHH-HhcCCCCCCEEEEeCC-C-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEc---Chhhccc
Confidence            444 4678889999999994 5 69999999988 78999986543 333333    3343 1  22222   222222 


Q ss_pred             c-CCccEEEECCCCh-hhHHHHHhcccCCcEEEEeccC
Q 021831          235 K-GKFDAVLDTIGAP-ETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       235 ~-~~~dvvid~~g~~-~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      . ++||+|+...+.. ..+..+.+.|+++|+++.....
T Consensus       155 ~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~  192 (248)
T 2yvl_A          155 PEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLPT  192 (248)
T ss_dssp             CTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred             CCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            2 4799999988876 6889999999999999987653

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.20  E-value=5.4e-06  Score=75.61  Aligned_cols=95  Identities=25%  Similarity=0.287  Sum_probs=69.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceE-EeCCC-----------------------h
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQA-VDYSS-----------------------K  228 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v-~~~~~-----------------------~  228 (307)
                      ++++|+|+|+ |.+|+.+++.++.+|++|++..+. ++.+.++++|++.+ ++..+                       .
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            6899999995 999999999999999998887554 55667778888654 12211                       0


Q ss_pred             hHHHHhcCCccEEEECC---CChh--h-HHHHHhcccCCcEEEEeccC
Q 021831          229 DIELAIKGKFDAVLDTI---GAPE--T-ERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       229 ~~~~~~~~~~dvvid~~---g~~~--~-~~~~~~~l~~~G~~v~~g~~  270 (307)
                      .+.+.+ .++|+||+++   |...  . ....++.|++++.++.++.+
T Consensus       250 ~l~~~~-~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~  296 (384)
T 1l7d_A          250 AVLKEL-VKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVE  296 (384)
T ss_dssp             HHHHHH-TTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGG
T ss_pred             HHHHHh-CCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecC
Confidence            122222 5799999999   5321  2 26788999999999999843

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=98.18  E-value=4.8e-05  Score=65.43  Aligned_cols=133  Identities=13%  Similarity=0.162  Sum_probs=88.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH---HHHcCCc-eE--EeCCChh-HHHHhc------CCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR---VLAAGAE-QA--VDYSSKD-IELAIK------GKFD  239 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~---~~~~g~~-~v--~~~~~~~-~~~~~~------~~~d  239 (307)
                      .|+.+||+||++++|++.++.+...|++|+...+.++ .+.   +.+.+.. ..  .|.++++ ..+.+.      ++.|
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iD   85 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLD   85 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            5889999999999999999998899999988866543 222   3333432 22  3444432 222221      7899


Q ss_pred             EEEECCCCh---------h---------------hHHHHHhccc-CCcEEEEeccCcccccccccceechhHHHHHHHHH
Q 021831          240 AVLDTIGAP---------E---------------TERLGLNFLK-RGGHYMTLHGETAALADHYGLALGLPIATTVLLKK  294 (307)
Q Consensus       240 vvid~~g~~---------~---------------~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (307)
                      +++++.|..         +               ....++..|+ .+|++|.++.............++....+...+.+
T Consensus        86 iLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr  165 (258)
T 4gkb_A           86 GLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNTSGYCASKGAQLALTR  165 (258)
T ss_dssp             EEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSSCHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCCchHHHHHHHHHHHHHH
Confidence            999999841         0               1134455553 57999999988765555555556666666666666


Q ss_pred             HHh-hhhcccccc
Q 021831          295 RMQ-TWYSYGIGC  306 (307)
Q Consensus       295 ~~~-~~~~~~i~~  306 (307)
                      .+. .+.++||+|
T Consensus       166 ~lA~ela~~gIrV  178 (258)
T 4gkb_A          166 EWAVALREHGVRV  178 (258)
T ss_dssp             HHHHHHGGGTCEE
T ss_pred             HHHHHhcccCeEE
Confidence            555 667888986

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=98.16  E-value=1.9e-05  Score=67.76  Aligned_cols=133  Identities=22%  Similarity=0.258  Sum_probs=83.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHcCCc-eEE--eCCChh-HHH---Hhc---CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGAE-QAV--DYSSKD-IEL---AIK---GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~g~~-~v~--~~~~~~-~~~---~~~---~~~dvv  241 (307)
                      .|+++||+||++++|.+.++.+...|++|+.+.++.+. +. .++++.. ..+  |.++.+ ..+   .+.   +++|++
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   86 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLL   86 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            57899999999999999999999999999998776432 22 3344432 222  334332 221   111   689999


Q ss_pred             EECCCChh-------------------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHHHHHHHHHHH
Q 021831          242 LDTIGAPE-------------------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM  296 (307)
Q Consensus       242 id~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (307)
                      |++.|...                         ....++..++++|++|.++.............++....+...+-+.+
T Consensus        87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~l  166 (255)
T 4eso_A           87 HINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVL  166 (255)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTBHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCchHHHHHHHHHHHHHHHH
Confidence            99987420                         12445566777899999987665443333334444444444444444


Q ss_pred             h-hhhcccccc
Q 021831          297 Q-TWYSYGIGC  306 (307)
Q Consensus       297 ~-~~~~~~i~~  306 (307)
                      . .+.++||++
T Consensus       167 a~e~~~~gi~v  177 (255)
T 4eso_A          167 AAELLPRGIRV  177 (255)
T ss_dssp             HHHTGGGTCEE
T ss_pred             HHHHhhhCcEE
Confidence            4 455667775

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=98.10  E-value=8.4e-05  Score=65.10  Aligned_cols=133  Identities=20%  Similarity=0.236  Sum_probs=82.2

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCceEE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGG--AVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAEQAV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g--~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~~v~--~~~~~~-~~~~~~------~~  237 (307)
                      .|.++||+||+|  ++|.+.++.+...|++|+.+.++++. +.    ..+.+....+  |.++.+ ..+.+.      ++
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS  108 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            478999999986  99999999998999999988776532 21    2334443333  344432 222221      68


Q ss_pred             ccEEEECCCChh-----------------------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHHH
Q 021831          238 FDAVLDTIGAPE-----------------------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIAT  288 (307)
Q Consensus       238 ~dvvid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  288 (307)
                      +|++|++.|...                             ....++..++.+|++|.++.............++....+
T Consensus       109 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~~~~Y~asKaa  188 (296)
T 3k31_A          109 LDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHYNVMGVCKAA  188 (296)
T ss_dssp             CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTTHHHHHHHH
T ss_pred             CCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCCchhhHHHHHH
Confidence            999999998421                             113455566778999999876553333333334444444


Q ss_pred             HHHHHHHHh-hhhcccccc
Q 021831          289 TVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       289 ~~~~~~~~~-~~~~~~i~~  306 (307)
                      ...+-+.+. .+..+||++
T Consensus       189 l~~l~~~la~e~~~~gIrv  207 (296)
T 3k31_A          189 LEASVKYLAVDLGKQQIRV  207 (296)
T ss_dssp             HHHHHHHHHHHHHTTTEEE
T ss_pred             HHHHHHHHHHHHhhcCcEE
Confidence            444444443 455667765

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=98.08  E-value=1.9e-05  Score=68.02  Aligned_cols=131  Identities=18%  Similarity=0.201  Sum_probs=81.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChh-H---HHHhc---CCccEEEECCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD-I---ELAIK---GKFDAVLDTIG  246 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~-~---~~~~~---~~~dvvid~~g  246 (307)
                      .|+++||+||++++|++.++.+...|++|+.+.+++.....+.+  ....|.++.+ .   .+.+.   +++|+++++.|
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~--~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG   87 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGLPEEL--FVEADLTTKEGCAIVAEATRQRLGGVDVIVHMLG   87 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTSCTTT--EEECCTTSHHHHHHHHHHHHHHTSSCSEEEECCC
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCCCcEE--EEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            58999999999999999999999999999998776542211111  1223444432 1   22221   68999999887


Q ss_pred             Chh---------------------------hHHHHHhcc--cCCcEEEEeccCccccccccc-ceechhHHHHHHHHHH-
Q 021831          247 APE---------------------------TERLGLNFL--KRGGHYMTLHGETAALADHYG-LALGLPIATTVLLKKR-  295 (307)
Q Consensus       247 ~~~---------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~-  295 (307)
                      ...                           ....++..|  +.+|++|.++..........+ ..++....+...+-+. 
T Consensus        88 ~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~asKaal~~lt~~l  167 (261)
T 4h15_A           88 GSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAALSTYSKAM  167 (261)
T ss_dssp             CCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHHHHHHHHHHHHH
Confidence            310                           013445555  346999999876654443332 3334444444444444 


Q ss_pred             Hhhhhcccccc
Q 021831          296 MQTWYSYGIGC  306 (307)
Q Consensus       296 ~~~~~~~~i~~  306 (307)
                      ...+.++||+|
T Consensus       168 A~Ela~~gIrV  178 (261)
T 4h15_A          168 SKEVSPKGVRV  178 (261)
T ss_dssp             HHHHGGGTEEE
T ss_pred             HHHhhhhCeEE
Confidence            44667888886

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=98.08  E-value=8e-05  Score=65.08  Aligned_cols=133  Identities=15%  Similarity=0.259  Sum_probs=82.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HH----HHHcCCc-eEE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR----VLAAGAE-QAV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~----~~~~g~~-~v~--~~~~~~-~~~~~~------~~  237 (307)
                      .|+++||+||++++|.+.++.+...|++|+.+.+....  +.    .++.+.. ..+  |.++.+ ..+.+.      ++
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  125 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS  125 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999888765432  11    2333433 222  444432 222121      58


Q ss_pred             ccEEEECCCChh--------------------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHHHHHH
Q 021831          238 FDAVLDTIGAPE--------------------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVL  291 (307)
Q Consensus       238 ~dvvid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  291 (307)
                      +|++|++.|...                          ....++..++.+|++|.++.............++....+...
T Consensus       126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  205 (291)
T 3ijr_A          126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVA  205 (291)
T ss_dssp             CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCChhHHHHHHHHHH
Confidence            999999977310                          124556667788999999876554333333334444444444


Q ss_pred             HHHHHh-hhhcccccc
Q 021831          292 LKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       292 ~~~~~~-~~~~~~i~~  306 (307)
                      +-+.+. .+..+||++
T Consensus       206 l~~~la~e~~~~gi~v  221 (291)
T 3ijr_A          206 FTRSLSQSLVQKGIRV  221 (291)
T ss_dssp             HHHHHHHHHGGGTCEE
T ss_pred             HHHHHHHHHhhcCEEE
Confidence            444443 445667765

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=98.08  E-value=7.5e-05  Score=65.33  Aligned_cols=133  Identities=21%  Similarity=0.263  Sum_probs=82.6

Q ss_pred             CCCEEEEEcCCch--HHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCceEE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGA--VGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAEQAV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~--~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~~v~--~~~~~~-~~~~~~------~~  237 (307)
                      .|+++||+||+|.  +|.+.++.+...|++|+.+.+.++. +.    ..+.+....+  |.++.+ ..+.+.      ++
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  109 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGK  109 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            5789999999855  9999999999999999888776432 11    2233433333  344432 222221      58


Q ss_pred             ccEEEECCCChh-----------------------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHHH
Q 021831          238 FDAVLDTIGAPE-----------------------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIAT  288 (307)
Q Consensus       238 ~dvvid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  288 (307)
                      +|++|++.|...                             ....++..++++|++|.++.............++....+
T Consensus       110 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa  189 (293)
T 3grk_A          110 LDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNYNVMGVAKAA  189 (293)
T ss_dssp             CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTTTHHHHHHHH
T ss_pred             CCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCchHHHHHHHHH
Confidence            999999988431                             123455566778999999876554333333334444445


Q ss_pred             HHHHHHHHh-hhhcccccc
Q 021831          289 TVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       289 ~~~~~~~~~-~~~~~~i~~  306 (307)
                      ...+-+.+. .+..+||++
T Consensus       190 ~~~l~~~la~e~~~~gI~v  208 (293)
T 3grk_A          190 LEASVKYLAVDLGPQNIRV  208 (293)
T ss_dssp             HHHHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHHHhHhCCEE
Confidence            554444444 455667775

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=98.02  E-value=0.00013  Score=63.84  Aligned_cols=133  Identities=17%  Similarity=0.206  Sum_probs=83.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc---HHH----HHHcCCceE---EeCCChh-HH---HHhc---C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS---IDR----VLAAGAEQA---VDYSSKD-IE---LAIK---G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~---~~~----~~~~g~~~v---~~~~~~~-~~---~~~~---~  236 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.+..+   .+.    +++.+....   .|.++.+ ..   +.+.   +
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999988865422   111    233444322   2333332 22   2221   6


Q ss_pred             CccEEEECCCChh--------------------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHHHHH
Q 021831          237 KFDAVLDTIGAPE--------------------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       237 ~~dvvid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      ++|++|++.|...                          ....++..++++|++|.++.............++....+..
T Consensus       128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~  207 (294)
T 3r3s_A          128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAIL  207 (294)
T ss_dssp             CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCCchHHHHHHHHHH
Confidence            8999999988410                          12455667778899999998765443333334444555555


Q ss_pred             HHHHHHh-hhhcccccc
Q 021831          291 LLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~-~~~~~~i~~  306 (307)
                      .+-+.+. .+..+||++
T Consensus       208 ~l~~~la~e~~~~gI~v  224 (294)
T 3r3s_A          208 NYSRGLAKQVAEKGIRV  224 (294)
T ss_dssp             HHHHHHHHHHGGGTCEE
T ss_pred             HHHHHHHHHHhhcCeEE
Confidence            5554444 445667765

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=98.02  E-value=5.2e-05  Score=64.59  Aligned_cols=133  Identities=16%  Similarity=0.208  Sum_probs=81.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HHHHHcCCceE---EeCCChh-HHHHhc------CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQA---VDYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~~~~~g~~~v---~~~~~~~-~~~~~~------~~~dvv  241 (307)
                      .|+++||+||++++|.+.++.+...|++|+.+.++.+.  +...+++....   .|.++.+ ..+.+.      +++|++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   84 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL   84 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            47899999999999999999999999999988766432  22344554322   2333332 222221      689999


Q ss_pred             EECCCCh----------hh---------------HHHHHhccc---CCcEEEEeccCcccccccccceechhHHHHHHHH
Q 021831          242 LDTIGAP----------ET---------------ERLGLNFLK---RGGHYMTLHGETAALADHYGLALGLPIATTVLLK  293 (307)
Q Consensus       242 id~~g~~----------~~---------------~~~~~~~l~---~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  293 (307)
                      |++.|..          +.               ...++..|+   ..|++|.++.............++....+...+-
T Consensus        85 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~  164 (247)
T 3rwb_A           85 VNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFT  164 (247)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHHHHHHH
Confidence            9999841          00               123333343   2689999988655433333334444444444444


Q ss_pred             HHHh-hhhcccccc
Q 021831          294 KRMQ-TWYSYGIGC  306 (307)
Q Consensus       294 ~~~~-~~~~~~i~~  306 (307)
                      +.+. .+.++||++
T Consensus       165 ~~la~e~~~~gi~v  178 (247)
T 3rwb_A          165 RALATELGKYNITA  178 (247)
T ss_dssp             HHHHHHHGGGTEEE
T ss_pred             HHHHHHhhhcCeEE
Confidence            4443 555667775

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.02  E-value=1.3e-05  Score=73.49  Aligned_cols=95  Identities=23%  Similarity=0.301  Sum_probs=68.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEE-eCC-------------Ch--------hH
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAV-DYS-------------SK--------DI  230 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~-~~~-------------~~--------~~  230 (307)
                      ++++|+|+|+ |.+|+.++++++.+|++|++..++ ++.+.++++|++.+. +..             ..        .+
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  249 (401)
T 1x13_A          171 PPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF  249 (401)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence            5899999995 999999999999999998888554 555667888876441 110             11        12


Q ss_pred             HHHhcCCccEEEECCCCh-----hhH-HHHHhcccCCcEEEEeccC
Q 021831          231 ELAIKGKFDAVLDTIGAP-----ETE-RLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       231 ~~~~~~~~dvvid~~g~~-----~~~-~~~~~~l~~~G~~v~~g~~  270 (307)
                      .+.+ .++|+||++++.+     ..+ ...++.|++++.++.++.+
T Consensus       250 ~e~~-~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~  294 (401)
T 1x13_A          250 AAQA-KEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQ  294 (401)
T ss_dssp             HHHH-HHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGG
T ss_pred             HHHh-CCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCC
Confidence            2222 4689999995321     122 5788899999999999954

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.01  E-value=7.6e-06  Score=63.81  Aligned_cols=106  Identities=14%  Similarity=0.124  Sum_probs=71.1

Q ss_pred             HHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HHHHHcCCceEEeCCChhHHHHhcCCc
Q 021831          161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKF  238 (307)
Q Consensus       161 ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~~~~~~  238 (307)
                      .++.+++ ......+++|+|+|+ |.+|...++.++..|++|+...++.+.  ..+++++.. +....  ++.+.+ .++
T Consensus         8 v~~~a~~-~~~~~~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~-~~~~~--~~~~~~-~~~   81 (144)
T 3oj0_A            8 IPSIVYD-IVRKNGGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYE-YVLIN--DIDSLI-KNN   81 (144)
T ss_dssp             HHHHHHH-HHHHHCCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCE-EEECS--CHHHHH-HTC
T ss_pred             HHHHHHH-HHHhccCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCc-eEeec--CHHHHh-cCC
Confidence            4455554 222234899999995 999999999988899996655555432  335667743 22332  233333 359


Q ss_pred             cEEEECCCChhhHHHHHhcccCCcEEEEeccCccc
Q 021831          239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAA  273 (307)
Q Consensus       239 dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~  273 (307)
                      |+||++++....... ...+++++.++.++.|...
T Consensus        82 Divi~at~~~~~~~~-~~~l~~g~~vid~~~p~~~  115 (144)
T 3oj0_A           82 DVIITATSSKTPIVE-ERSLMPGKLFIDLGNPPNI  115 (144)
T ss_dssp             SEEEECSCCSSCSBC-GGGCCTTCEEEECCSSCSB
T ss_pred             CEEEEeCCCCCcEee-HHHcCCCCEEEEccCCccC
Confidence            999999997633222 3678999999999987653

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=98.01  E-value=0.00011  Score=63.55  Aligned_cols=133  Identities=18%  Similarity=0.295  Sum_probs=81.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HH-HHHHcCCc---eEEeCCChh-HHHHhc------CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-ID-RVLAAGAE---QAVDYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~-~~~~~g~~---~v~~~~~~~-~~~~~~------~~~dvv  241 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.+++. .+ ..++++..   ...|.++.+ ..+.+.      +++|++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   89 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV   89 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4789999999999999999999999999998876543 33 24455532   223444432 222221      589999


Q ss_pred             EECCCCh-h--------------------------hHHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHHHH
Q 021831          242 LDTIGAP-E--------------------------TERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTVLL  292 (307)
Q Consensus       242 id~~g~~-~--------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  292 (307)
                      |++.|.. .                          ....++..|  +.+|++|.++.............++....+...+
T Consensus        90 v~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l  169 (271)
T 3tzq_B           90 DNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETL  169 (271)
T ss_dssp             EECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHHHHHHHHHH
Confidence            9998742 0                          012333444  3468999998765543333333444444444444


Q ss_pred             HHHHh-hhhcccccc
Q 021831          293 KKRMQ-TWYSYGIGC  306 (307)
Q Consensus       293 ~~~~~-~~~~~~i~~  306 (307)
                      -+.+. .+..+||++
T Consensus       170 ~~~la~e~~~~gi~v  184 (271)
T 3tzq_B          170 TRYVATQYGRHGVRC  184 (271)
T ss_dssp             HHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHhhcCEEE
Confidence            44433 455667765

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=98.00  E-value=0.00012  Score=62.91  Aligned_cols=133  Identities=16%  Similarity=0.185  Sum_probs=80.4

Q ss_pred             CCCEEEEEcCCch--HHHHHHHHHHHcCCEEEEEeCCccH-HHH----HHcCC--ceE--EeCCChh-HHHHhc------
Q 021831          174 EGQRLLVLGGGGA--VGFAAVQFSVASGCHVSATCGSKSI-DRV----LAAGA--EQA--VDYSSKD-IELAIK------  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~--~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~----~~~g~--~~v--~~~~~~~-~~~~~~------  235 (307)
                      .|.++||+||+|.  +|.+.++.+...|++|+.+.+.++. +.+    .+.+.  ...  .|.++.+ ..+.+.      
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV   85 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            4789999999954  9999999998999999988766432 222    22332  122  2444432 222221      


Q ss_pred             CCccEEEECCCChh-----------------------------hHHHHHhcccCCcEEEEeccCcccccccccceechhH
Q 021831          236 GKFDAVLDTIGAPE-----------------------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPI  286 (307)
Q Consensus       236 ~~~dvvid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  286 (307)
                      +++|++|++.|...                             ....++..++++|++|.++.............++...
T Consensus        86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  165 (266)
T 3oig_A           86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNYNVMGVAK  165 (266)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTHHHHHHH
T ss_pred             CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCcchhHHHH
Confidence            57999999987421                             1234556677789999999765543333333344444


Q ss_pred             HHHHHHHHHHh-hhhcccccc
Q 021831          287 ATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       287 ~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      .+...+-+.+. .+..+||++
T Consensus       166 aa~~~~~~~la~e~~~~gi~v  186 (266)
T 3oig_A          166 ASLDASVKYLAADLGKENIRV  186 (266)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHHHHHhhcCcEE
Confidence            44444444443 445557765

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=98.00  E-value=0.0001  Score=64.02  Aligned_cols=133  Identities=19%  Similarity=0.237  Sum_probs=79.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HH----HHHcCCc-eEE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR----VLAAGAE-QAV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~----~~~~g~~-~v~--~~~~~~-~~~~~~------~~  237 (307)
                      .|.++||+||+|++|.++++.+...|++|+.+.++...  +.    +++.+.. ..+  |.++.+ ..+.+.      ++
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  107 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK  107 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999988765432  11    2334433 222  333322 222111      57


Q ss_pred             ccEEEECCCChh-------------------------hHHHHHhcccCCcEEEEeccCcccccccc-cceechhHHHHHH
Q 021831          238 FDAVLDTIGAPE-------------------------TERLGLNFLKRGGHYMTLHGETAALADHY-GLALGLPIATTVL  291 (307)
Q Consensus       238 ~dvvid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~  291 (307)
                      +|++|++.|...                         ....++..|+.+|++|.++.......... ...++....+...
T Consensus       108 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~  187 (283)
T 1g0o_A          108 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIET  187 (283)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHHHHHH
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCCCCcchHHHHHHHHH
Confidence            999999988420                         11345556667899999987554322211 2223333333333


Q ss_pred             HHHHHh-hhhcccccc
Q 021831          292 LKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       292 ~~~~~~-~~~~~~i~~  306 (307)
                      +-+.+. .+..+||++
T Consensus       188 ~~~~la~e~~~~gi~v  203 (283)
T 1g0o_A          188 FARCMAIDMADKKITV  203 (283)
T ss_dssp             HHHHHHHHHGGGTCEE
T ss_pred             HHHHHHHHhcccCeEE
Confidence            333333 445667765

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.99  E-value=0.00013  Score=63.00  Aligned_cols=133  Identities=18%  Similarity=0.213  Sum_probs=81.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-c-HH----HHHHcCCc-eEE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-S-ID----RVLAAGAE-QAV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~-~~----~~~~~g~~-~v~--~~~~~~-~~~~~~------~~  237 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.+.. + .+    .+++.+.. ..+  |.++.+ ..+.+.      ++
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   96 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGH   96 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999998875432 2 11    13344443 222  333332 222221      58


Q ss_pred             ccEEEECCCCh----------h---------------hHHHHHhcccCCcEEEEeccCc-ccccccccceechhHHHHHH
Q 021831          238 FDAVLDTIGAP----------E---------------TERLGLNFLKRGGHYMTLHGET-AALADHYGLALGLPIATTVL  291 (307)
Q Consensus       238 ~dvvid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~  291 (307)
                      +|++|++.|..          +               ....++..++++|++|.++... ..........++....+...
T Consensus        97 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~  176 (270)
T 3is3_A           97 LDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDS  176 (270)
T ss_dssp             CCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTTCHHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCCCchhHHHHHHHHH
Confidence            99999998841          0               1245666777899999999865 22222223334444444444


Q ss_pred             HHHHHh-hhhcccccc
Q 021831          292 LKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       292 ~~~~~~-~~~~~~i~~  306 (307)
                      +-+.+. .+..+||++
T Consensus       177 ~~~~la~e~~~~gi~v  192 (270)
T 3is3_A          177 FVRIFSKDCGDKKITV  192 (270)
T ss_dssp             HHHHHHHHHGGGTCEE
T ss_pred             HHHHHHHHhcccCeEE
Confidence            444443 445667775

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=97.99  E-value=0.00012  Score=62.91  Aligned_cols=135  Identities=19%  Similarity=0.248  Sum_probs=81.7

Q ss_pred             CCCCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCccH-HHH----HHcCCceEE--eCCChh-HHHHhc------
Q 021831          172 MSEGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKSI-DRV----LAAGAEQAV--DYSSKD-IELAIK------  235 (307)
Q Consensus       172 ~~~g~~VlI~Ga~--g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~----~~~g~~~v~--~~~~~~-~~~~~~------  235 (307)
                      ...+.++||+||+  +++|...++.+...|++|+.+.+.++. +.+    .+.+....+  |.++.+ ..+.+.      
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   90 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW   90 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3568999999998  999999999999999999988766432 222    333433333  344432 222221      


Q ss_pred             CCccEEEECCCChh------------------------------hHHHHHhcccCCcEEEEeccCcccccccccceechh
Q 021831          236 GKFDAVLDTIGAPE------------------------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLP  285 (307)
Q Consensus       236 ~~~dvvid~~g~~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  285 (307)
                      +++|++|++.|...                              ....++..++++|++|.++.............++..
T Consensus        91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  170 (271)
T 3ek2_A           91 DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYNTMGLA  170 (271)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHH
T ss_pred             CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCCccchhHH
Confidence            57999999987421                              113445566678999999876553333333333444


Q ss_pred             HHHHHHHHHHHh-hhhcccccc
Q 021831          286 IATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       286 ~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+...+-+.+. .+..+||++
T Consensus       171 Kaa~~~~~~~la~e~~~~gi~v  192 (271)
T 3ek2_A          171 KAALEASVRYLAVSLGAKGVRV  192 (271)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEE
T ss_pred             HHHHHHHHHHHHHHHHhcCcEE
Confidence            444444444433 444567765

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.97  E-value=7.3e-05  Score=64.46  Aligned_cols=133  Identities=17%  Similarity=0.201  Sum_probs=77.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H-HHHHcCCce-EE--eCCChh-HHHHhc------CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAGAEQ-AV--DYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~-~~~~~g~~~-v~--~~~~~~-~~~~~~------~~~dvv  241 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.++.+. + ..++++... .+  |.++.+ ..+.+.      +++|++
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDIL  105 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999888765432 2 244555432 22  333332 222221      589999


Q ss_pred             EECCCChh----------h---------------HHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHHHHHH
Q 021831          242 LDTIGAPE----------T---------------ERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKK  294 (307)
Q Consensus       242 id~~g~~~----------~---------------~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (307)
                      |++.|...          .               ...++..+  +..|++|.++.............++....+...+-+
T Consensus       106 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~  185 (266)
T 3grp_A          106 VNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSK  185 (266)
T ss_dssp             EECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHHHHHHHHHH
Confidence            99998521          0               23334444  356899999876553333222333333444443444


Q ss_pred             HHh-hhhcccccc
Q 021831          295 RMQ-TWYSYGIGC  306 (307)
Q Consensus       295 ~~~-~~~~~~i~~  306 (307)
                      .+. .+..+||++
T Consensus       186 ~la~e~~~~gI~v  198 (266)
T 3grp_A          186 ALAQEIASRNITV  198 (266)
T ss_dssp             HHHHHHGGGTEEE
T ss_pred             HHHHHhhhhCcEE
Confidence            433 455667765

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.96  E-value=3.8e-05  Score=66.86  Aligned_cols=133  Identities=23%  Similarity=0.280  Sum_probs=79.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHH---cC-Cc-eEE--eCCChh-HHH---Hhc---CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLA---AG-AE-QAV--DYSSKD-IEL---AIK---GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~---~g-~~-~v~--~~~~~~-~~~---~~~---~~  237 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.++.+. +. ..+   .+ .. ..+  |.++.+ ..+   .+.   ++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  111 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR  111 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999998776432 21 222   12 11 222  444432 222   221   68


Q ss_pred             ccEEEECCCChh--------------------------hHHHHHhcccC----CcEEEEeccCcccccccccceechhHH
Q 021831          238 FDAVLDTIGAPE--------------------------TERLGLNFLKR----GGHYMTLHGETAALADHYGLALGLPIA  287 (307)
Q Consensus       238 ~dvvid~~g~~~--------------------------~~~~~~~~l~~----~G~~v~~g~~~~~~~~~~~~~~~~~~~  287 (307)
                      +|++|++.|...                          ....++..+..    +|++|.++.............++....
T Consensus       112 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKa  191 (281)
T 4dry_A          112 LDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKH  191 (281)
T ss_dssp             CSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHHHHH
Confidence            999999987420                          02334444432    689999987665443333344444444


Q ss_pred             HHHHHHHHHh-hhhcccccc
Q 021831          288 TTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       288 ~~~~~~~~~~-~~~~~~i~~  306 (307)
                      +...+-+.+. .+..+||++
T Consensus       192 a~~~l~~~la~e~~~~gI~v  211 (281)
T 4dry_A          192 AITGLTKSTALDGRMHDIAC  211 (281)
T ss_dssp             HHHHHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHHHhcccCeEE
Confidence            4444444443 455667765

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.96  E-value=0.0001  Score=63.53  Aligned_cols=133  Identities=17%  Similarity=0.193  Sum_probs=80.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-Ccc-HHH----HHHcCCc-eE--EeCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKS-IDR----VLAAGAE-QA--VDYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~-~~~----~~~~g~~-~v--~~~~~~~-~~~~~~------~~  237 (307)
                      .|.++||+||++++|.+.++.+...|++|+...+ ..+ .+.    ++..+.. ..  .|.++.+ ..+.+.      ++
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  105 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG  105 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999988888999888743 332 221    2334433 22  2444432 222221      68


Q ss_pred             ccEEEECCCCh----------h---------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHHHHHHH
Q 021831          238 FDAVLDTIGAP----------E---------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLL  292 (307)
Q Consensus       238 ~dvvid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  292 (307)
                      +|++|++.|..          +               ....++..++.+|++|.++.............++....+...+
T Consensus       106 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l  185 (267)
T 3u5t_A          106 VDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSYGIYAAAKAGVEAM  185 (267)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCchHHHHHHHHHHHH
Confidence            99999999841          0               1235566677789999998765433333333344444444444


Q ss_pred             HHHHh-hhhcccccc
Q 021831          293 KKRMQ-TWYSYGIGC  306 (307)
Q Consensus       293 ~~~~~-~~~~~~i~~  306 (307)
                      -+.+. .+..+||++
T Consensus       186 ~~~la~e~~~~gI~v  200 (267)
T 3u5t_A          186 THVLSKELRGRDITV  200 (267)
T ss_dssp             HHHHHHHTTTSCCEE
T ss_pred             HHHHHHHhhhhCCEE
Confidence            44444 445567765

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.95  E-value=0.00021  Score=61.73  Aligned_cols=133  Identities=24%  Similarity=0.274  Sum_probs=80.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-c-HHH----HHHcCCce-EE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-S-IDR----VLAAGAEQ-AV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~-~~~----~~~~g~~~-v~--~~~~~~-~~~~~~------~~  237 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.+.. + .+.    +++.+... .+  |.++.+ ..+.+.      ++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  109 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG  109 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999998885433 2 211    23344432 22  333332 222221      58


Q ss_pred             ccEEEECCCCh----------h---------------hHHHHHhcccCCcEEEEeccCccccc-ccccceechhHHHHHH
Q 021831          238 FDAVLDTIGAP----------E---------------TERLGLNFLKRGGHYMTLHGETAALA-DHYGLALGLPIATTVL  291 (307)
Q Consensus       238 ~dvvid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~  291 (307)
                      +|++|++.|..          +               ....++..|+.+|++|.++....... ......++....+...
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~  189 (271)
T 3v2g_A          110 LDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAALAG  189 (271)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTTCHHHHHHHHHHHH
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCCchHHHHHHHHHHH
Confidence            99999998841          0               12445667778999999987543222 2222234444444444


Q ss_pred             HHHHHh-hhhcccccc
Q 021831          292 LKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       292 ~~~~~~-~~~~~~i~~  306 (307)
                      +-+.+. .+..+||++
T Consensus       190 l~~~la~e~~~~gIrv  205 (271)
T 3v2g_A          190 LTKGLARDLGPRGITV  205 (271)
T ss_dssp             HHHHHHHHHGGGTCEE
T ss_pred             HHHHHHHHhhhhCeEE
Confidence            444433 445667765

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.95  E-value=7.4e-05  Score=64.87  Aligned_cols=133  Identities=23%  Similarity=0.318  Sum_probs=81.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H-HHHHcCCc-eEE--eCCChh-HHHHhc------CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAGAE-QAV--DYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~-~~~~~g~~-~v~--~~~~~~-~~~~~~------~~~dvv  241 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.++.+. + ...+++.. ..+  |.++.+ ..+.+.      +++|++
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  107 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL  107 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47899999999999999999998999999998776432 2 23444432 222  444432 222111      689999


Q ss_pred             EECCCCh----------hh---------------HHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHHHHHH
Q 021831          242 LDTIGAP----------ET---------------ERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKK  294 (307)
Q Consensus       242 id~~g~~----------~~---------------~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (307)
                      |++.|..          +.               ...++..+  +.+|++|.++.............++....+...+-+
T Consensus       108 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~  187 (277)
T 3gvc_A          108 VANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSR  187 (277)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHHHHHHHHH
Confidence            9998841          00               13344444  457999999876554333333334444444444444


Q ss_pred             HHh-hhhcccccc
Q 021831          295 RMQ-TWYSYGIGC  306 (307)
Q Consensus       295 ~~~-~~~~~~i~~  306 (307)
                      .+. .+..+||++
T Consensus       188 ~la~e~~~~gI~v  200 (277)
T 3gvc_A          188 ITAAELRSSGIRS  200 (277)
T ss_dssp             HHHHHHGGGTEEE
T ss_pred             HHHHHhcccCeEE
Confidence            433 445667765

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=97.94  E-value=3.2e-05  Score=66.09  Aligned_cols=129  Identities=21%  Similarity=0.256  Sum_probs=79.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCCh-hHH---HHhc---CCccEEEECCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK-DIE---LAIK---GKFDAVLDTIG  246 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~-~~~---~~~~---~~~dvvid~~g  246 (307)
                      -+.++||+||+|++|.+.++.+...|++|+.+.++......    ....++..+. +..   +.+.   +++|++|++.|
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~----~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag   96 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD----HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAG   96 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS----EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc----cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            46899999999999999999999999999998776542211    1112233332 222   2221   57899999988


Q ss_pred             Ch-------h-------------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHHHHHHHHHHHhhhh
Q 021831          247 AP-------E-------------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWY  300 (307)
Q Consensus       247 ~~-------~-------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (307)
                      ..       .                   ....++..++++|++|.++.............++....+...+-+.+...+
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~  176 (251)
T 3orf_A           97 GWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASEN  176 (251)
T ss_dssp             CCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHTSTT
T ss_pred             cCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCCchhHHHHHHHHHHHHHHHHHh
Confidence            31       0                   123455566678999999876554333333344444555555555544433


Q ss_pred             ---cccccc
Q 021831          301 ---SYGIGC  306 (307)
Q Consensus       301 ---~~~i~~  306 (307)
                         .++|++
T Consensus       177 ~~~~~gi~v  185 (251)
T 3orf_A          177 GGLPAGSTS  185 (251)
T ss_dssp             SSSCTTCEE
T ss_pred             cccCCCcEE
Confidence               467764

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.93  E-value=0.00013  Score=62.30  Aligned_cols=133  Identities=19%  Similarity=0.237  Sum_probs=77.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHH---HcCCce-EE--eCCChh-HHHHhc------CCccE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVL---AAGAEQ-AV--DYSSKD-IELAIK------GKFDA  240 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~---~~g~~~-v~--~~~~~~-~~~~~~------~~~dv  240 (307)
                      .+.++||+||+|++|...++.+...|++|+.+.++.+.....   +.+... .+  |.++.+ +.+.+.      +++|+
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI   82 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            367899999999999999999999999999887765432222   224322 22  333332 222222      58999


Q ss_pred             EEECCCCh----------h---------------hHHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHHHH
Q 021831          241 VLDTIGAP----------E---------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLLK  293 (307)
Q Consensus       241 vid~~g~~----------~---------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  293 (307)
                      +|++.|..          .               ....++..++  ..|++|.++.............++........+-
T Consensus        83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~  162 (255)
T 2q2v_A           83 LVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLT  162 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHHHHHHH
Confidence            99998831          0               1223444443  3589999987654322222222333333333333


Q ss_pred             HHH-hhhhcccccc
Q 021831          294 KRM-QTWYSYGIGC  306 (307)
Q Consensus       294 ~~~-~~~~~~~i~~  306 (307)
                      +.+ ..+..+||++
T Consensus       163 ~~la~e~~~~gi~v  176 (255)
T 2q2v_A          163 KVVGLETATSNVTC  176 (255)
T ss_dssp             HHHHHHTTTSSEEE
T ss_pred             HHHHHHhcccCcEE
Confidence            333 3444567764

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.93  E-value=0.00016  Score=62.11  Aligned_cols=133  Identities=14%  Similarity=0.134  Sum_probs=81.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HHHHHcCCceE-EeCCChh-HHHHhc------CCccEEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQA-VDYSSKD-IELAIK------GKFDAVLD  243 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~~~~~g~~~v-~~~~~~~-~~~~~~------~~~dvvid  243 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.++...  +.+.+.+...+ .|.++.+ ..+.+.      +++|++|+
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~  105 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVH  105 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            46889999999999999999998999999998776543  33445554322 2444432 222221      57999999


Q ss_pred             CCCCh---------h---------------hHHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHHHHHHHh
Q 021831          244 TIGAP---------E---------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ  297 (307)
Q Consensus       244 ~~g~~---------~---------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (307)
                      +.|..         +               ....++..|+  ..|++|.++.............++....+...+-+.+.
T Consensus       106 nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la  185 (260)
T 3gem_A          106 NASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFA  185 (260)
T ss_dssp             CCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHHHHHHHHHHHHHH
Confidence            98841         0               1123334443  34899999876554443334445555555555555555


Q ss_pred             hhhcccccc
Q 021831          298 TWYSYGIGC  306 (307)
Q Consensus       298 ~~~~~~i~~  306 (307)
                      ....++|++
T Consensus       186 ~e~~~~Irv  194 (260)
T 3gem_A          186 ARFAPLVKV  194 (260)
T ss_dssp             HHHTTTCEE
T ss_pred             HHHCCCCEE
Confidence            444345654

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=97.92  E-value=4.3e-05  Score=63.92  Aligned_cols=113  Identities=19%  Similarity=0.229  Sum_probs=72.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChh-HHHHhc--CCccEEEECCCChh-
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD-IELAIK--GKFDAVLDTIGAPE-  249 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~--~~~dvvid~~g~~~-  249 (307)
                      .+.++||+||++++|.+.++.+...|++|+.+.+...            .|.++.+ ..+.+.  +++|++|++.|... 
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~------------~D~~~~~~v~~~~~~~g~id~lv~nAg~~~~   72 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG------------LDISDEKSVYHYFETIGAFDHLIVTAGSYAP   72 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT------------CCTTCHHHHHHHHHHHCSEEEEEECCCCCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc------------cCCCCHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence            4678999999999999999998888999998876643            2333322 222222  67999999988420 


Q ss_pred             -------------------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHHHHHHHHHHHhh
Q 021831          250 -------------------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQT  298 (307)
Q Consensus       250 -------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (307)
                                               ....++..++++|+++.++.............++....+...+-+.+..
T Consensus        73 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~la~  146 (223)
T 3uce_A           73 AGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANTYVKAAINAAIEATTKVLAK  146 (223)
T ss_dssp             CSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCchHHHHHHHHHHHHHHHHHH
Confidence                                     1234556677789999998765543333333334444444444444443

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=97.92  E-value=0.00025  Score=61.70  Aligned_cols=133  Identities=18%  Similarity=0.257  Sum_probs=80.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--------H----HHHHHcCCc-eEE--eCCChh-HHH---Hh
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--------I----DRVLAAGAE-QAV--DYSSKD-IEL---AI  234 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--------~----~~~~~~g~~-~v~--~~~~~~-~~~---~~  234 (307)
                      .+.++||+||++++|.+.++.+...|++|+.+.++.+        .    ..++..+.. ..+  |.++.+ ..+   .+
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   87 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT   87 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            4789999999999999999999999999999876543        1    123334432 222  444432 222   22


Q ss_pred             c---CCccEEEECCCCh----------h---------------hHHHHHhccc--CCcEEEEeccCcccccc-cccceec
Q 021831          235 K---GKFDAVLDTIGAP----------E---------------TERLGLNFLK--RGGHYMTLHGETAALAD-HYGLALG  283 (307)
Q Consensus       235 ~---~~~dvvid~~g~~----------~---------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~-~~~~~~~  283 (307)
                      .   +++|++|++.|..          +               ....++..|+  .+|++|.++........ .....++
T Consensus        88 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~  167 (285)
T 3sc4_A           88 VEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYM  167 (285)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSCSHHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCCCchHH
Confidence            1   5899999998841          0               1133444554  46899999876543332 2223344


Q ss_pred             hhHHHHHHHHHHHh-hhhcccccc
Q 021831          284 LPIATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       284 ~~~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ....+...+-+.+. .+..+||++
T Consensus       168 asKaal~~~~~~la~e~~~~gI~v  191 (285)
T 3sc4_A          168 MAKYGMTLCALGIAEELRDAGIAS  191 (285)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTCEE
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEE
Confidence            44444444444443 455667765

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.92  E-value=0.00014  Score=62.31  Aligned_cols=133  Identities=20%  Similarity=0.246  Sum_probs=80.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HHHHHcCCc-eEE--eCCChh-HHHHhc------CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE-QAV--DYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~~~~~g~~-~v~--~~~~~~-~~~~~~------~~~dvv  241 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.++.+.  +...+++.. ..+  |.++.+ ..+.+.      +++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   86 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL   86 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47899999999999999999998999999988765432  223444432 222  444432 222221      589999


Q ss_pred             EECCCCh----------hh---------------HHHHHhccc---CCcEEEEeccCcccccccccceechhHHHHHHHH
Q 021831          242 LDTIGAP----------ET---------------ERLGLNFLK---RGGHYMTLHGETAALADHYGLALGLPIATTVLLK  293 (307)
Q Consensus       242 id~~g~~----------~~---------------~~~~~~~l~---~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  293 (307)
                      |++.|..          +.               ...++..+.   .+|++|.++.............++....+...+-
T Consensus        87 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~  166 (259)
T 4e6p_A           87 VNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLT  166 (259)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHHHHHHHH
Confidence            9998841          11               122333332   2789999987655433333333444444444444


Q ss_pred             HHHh-hhhcccccc
Q 021831          294 KRMQ-TWYSYGIGC  306 (307)
Q Consensus       294 ~~~~-~~~~~~i~~  306 (307)
                      +.+. .+.++||++
T Consensus       167 ~~la~e~~~~gi~v  180 (259)
T 4e6p_A          167 QSAGLDLIKHRINV  180 (259)
T ss_dssp             HHHHHHHGGGTEEE
T ss_pred             HHHHHHhhhcCCEE
Confidence            4443 445667765

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.92  E-value=0.00012  Score=63.03  Aligned_cols=132  Identities=13%  Similarity=0.195  Sum_probs=80.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCce-E--EeCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAEQ-A--VDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~~-v--~~~~~~~-~~~~~~------~~~  238 (307)
                      .+.++||+||++++|.+.++.+...|++|+.+.++.+. +.    ++..+... .  .|.++.+ ..+.+.      +++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            46789999999999999999999999999988776432 22    23334322 1  2444432 222221      689


Q ss_pred             cEEEECCCCh----------hh---------------HHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHHH
Q 021831          239 DAVLDTIGAP----------ET---------------ERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTVL  291 (307)
Q Consensus       239 dvvid~~g~~----------~~---------------~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  291 (307)
                      |++|++.|..          +.               ...++..|  +.+|++|.++.............++....+...
T Consensus        83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~  162 (264)
T 3tfo_A           83 DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRA  162 (264)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHHHH
Confidence            9999998841          01               12334444  357999999987654443344445555555555


Q ss_pred             HHHHHhhhhcccccc
Q 021831          292 LKKRMQTWYSYGIGC  306 (307)
Q Consensus       292 ~~~~~~~~~~~~i~~  306 (307)
                      +-+.+.... +||++
T Consensus       163 l~~~la~e~-~gIrv  176 (264)
T 3tfo_A          163 ISDGLRQES-TNIRV  176 (264)
T ss_dssp             HHHHHHHHC-SSEEE
T ss_pred             HHHHHHHhC-CCCEE
Confidence            555554443 37765

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.91  E-value=8e-05  Score=64.45  Aligned_cols=133  Identities=18%  Similarity=0.252  Sum_probs=80.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H-HHHHcCCc-eEE--eCCChh-HHHHhc------CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAGAE-QAV--DYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~-~~~~~g~~-~v~--~~~~~~-~~~~~~------~~~dvv  241 (307)
                      .+.++||+||++++|.+.++.+...|++|+.+.++.+. + ...+++.. ..+  |.++.+ ..+.+.      +++|++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  106 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVL  106 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57889999999999999999999999999988776432 2 23444422 222  444432 222221      589999


Q ss_pred             EECCCChh--------------------------hHHHHHhcccC----CcEEEEeccCcccccccccceechhHHHHHH
Q 021831          242 LDTIGAPE--------------------------TERLGLNFLKR----GGHYMTLHGETAALADHYGLALGLPIATTVL  291 (307)
Q Consensus       242 id~~g~~~--------------------------~~~~~~~~l~~----~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  291 (307)
                      |++.|...                          ....++..+..    +|++|.++.............++....+...
T Consensus       107 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~  186 (272)
T 4dyv_A          107 FNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITG  186 (272)
T ss_dssp             EECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHHHHHHHH
T ss_pred             EECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHHHHHHHH
Confidence            99988410                          02334444532    6899999877654443333344444444444


Q ss_pred             HHHHHh-hhhcccccc
Q 021831          292 LKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       292 ~~~~~~-~~~~~~i~~  306 (307)
                      +-+.+. .+..++|++
T Consensus       187 l~~~la~e~~~~gI~v  202 (272)
T 4dyv_A          187 LTKSTSLDGRVHDIAC  202 (272)
T ss_dssp             HHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHhCccCEEE
Confidence            444443 445667765

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.91  E-value=0.00013  Score=61.92  Aligned_cols=135  Identities=15%  Similarity=0.168  Sum_probs=78.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHcCCce-E--EeCCChh-HHHHhc--CCccEEEE
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAAGAEQ-A--VDYSSKD-IELAIK--GKFDAVLD  243 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~g~~~-v--~~~~~~~-~~~~~~--~~~dvvid  243 (307)
                      -.+++++||+||+|++|...++.+...|++|+.+.++.+ .+. .+++.... +  .|.++.+ ..+.+.  +++|++|+
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~   90 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVC   90 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEE
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence            357899999999999999999999999999999877643 222 33443322 2  2333322 222232  47999999


Q ss_pred             CCCChh-------------------------hHHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHHHHHHHH
Q 021831          244 TIGAPE-------------------------TERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM  296 (307)
Q Consensus       244 ~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (307)
                      +.|...                         ....++..+  +..|++|.++.............++....+...+-+.+
T Consensus        91 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l  170 (249)
T 3f9i_A           91 NAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSL  170 (249)
T ss_dssp             CCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHHHHHHHHHHHH
Confidence            988421                         012233333  45689999997655433333333344444444444433


Q ss_pred             h-hhhcccccc
Q 021831          297 Q-TWYSYGIGC  306 (307)
Q Consensus       297 ~-~~~~~~i~~  306 (307)
                      . .+..+||++
T Consensus       171 a~e~~~~gi~v  181 (249)
T 3f9i_A          171 SYEVATRGITV  181 (249)
T ss_dssp             HHHHGGGTEEE
T ss_pred             HHHHHHcCcEE
Confidence            3 344556664

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.91  E-value=0.0002  Score=61.84  Aligned_cols=133  Identities=14%  Similarity=0.153  Sum_probs=77.8

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCcc----HHHHH-HcCCceEE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKS----IDRVL-AAGAEQAV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~--g~~G~~~~~~a~~~G~~Vi~~~~~~~----~~~~~-~~g~~~v~--~~~~~~-~~~~~~------~~  237 (307)
                      .|.++||+||+  |++|.++++.+...|++|+.+.++.+    .+.+. ..+....+  |.++.+ ..+.+.      ++
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   84 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999998  99999999999999999999877653    12222 23422233  444432 222111      57


Q ss_pred             ccEEEECCCChh-----------------------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHHH
Q 021831          238 FDAVLDTIGAPE-----------------------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIAT  288 (307)
Q Consensus       238 ~dvvid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  288 (307)
                      +|++|++.|...                             ....++..|+++|++|.++.............++....+
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  164 (275)
T 2pd4_A           85 LDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAA  164 (275)
T ss_dssp             EEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHHHHH
T ss_pred             CCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCCchhhHHHHHH
Confidence            999999987421                             013344555557999999875443222222223333444


Q ss_pred             HHHHHHHHh-hhhcccccc
Q 021831          289 TVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       289 ~~~~~~~~~-~~~~~~i~~  306 (307)
                      ...+-+.+. .+..+||++
T Consensus       165 ~~~~~~~la~e~~~~gi~v  183 (275)
T 2pd4_A          165 LESAVRYLAVDLGKHHIRV  183 (275)
T ss_dssp             HHHHHHHHHHHHHTTTCEE
T ss_pred             HHHHHHHHHHHhhhcCeEE
Confidence            444443333 344557765

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.91  E-value=0.00018  Score=62.29  Aligned_cols=133  Identities=23%  Similarity=0.271  Sum_probs=81.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H-HHHHcCCc-eE--EeCCChh-HHHHhc------CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAGAE-QA--VDYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~-~~~~~g~~-~v--~~~~~~~-~~~~~~------~~~dvv  241 (307)
                      .+.++||+||++++|.+.++.+...|++|+.+.++.+. + ...+++.. ..  .|.++.+ ..+.+.      +++|++
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  105 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVL  105 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47899999999999999999999999999988766432 2 23444433 22  2444432 222221      589999


Q ss_pred             EECCCCh----------hh---------------HHHHHhcccC--CcEEEEeccCcccccccccceechhHHHHHHHHH
Q 021831          242 LDTIGAP----------ET---------------ERLGLNFLKR--GGHYMTLHGETAALADHYGLALGLPIATTVLLKK  294 (307)
Q Consensus       242 id~~g~~----------~~---------------~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (307)
                      |++.|..          +.               ...++..++.  +|++|.++.............++....+...+-+
T Consensus       106 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~  185 (277)
T 4dqx_A          106 VNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTR  185 (277)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH
T ss_pred             EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHHHHHHHHHH
Confidence            9998831          01               1244455543  5899999876554333333344444444444444


Q ss_pred             HHh-hhhcccccc
Q 021831          295 RMQ-TWYSYGIGC  306 (307)
Q Consensus       295 ~~~-~~~~~~i~~  306 (307)
                      .+. .+..+||++
T Consensus       186 ~la~e~~~~gi~v  198 (277)
T 4dqx_A          186 AMAMDHAKEGIRV  198 (277)
T ss_dssp             HHHHHHGGGTEEE
T ss_pred             HHHHHhhhcCeEE
Confidence            443 445667765

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.90  E-value=0.00015  Score=62.26  Aligned_cols=133  Identities=14%  Similarity=0.162  Sum_probs=79.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eEE--eCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QAV--DYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v~--~~~~~~-~~~~~~------~~~  238 (307)
                      .|.++||+|+++++|.+.++.+...|++|+.+.++.+. +.    +++.+.. ..+  |.++.+ ..+.+.      +++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   89 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRV   89 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999999999999988776432 21    2333432 222  444432 222221      589


Q ss_pred             cEEEECCCCh-----------hh---------------HHHHHhcc-cCCcEEEEeccCcccccccccceechhHHHHHH
Q 021831          239 DAVLDTIGAP-----------ET---------------ERLGLNFL-KRGGHYMTLHGETAALADHYGLALGLPIATTVL  291 (307)
Q Consensus       239 dvvid~~g~~-----------~~---------------~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  291 (307)
                      |++|++.|..           +.               ...++..+ +.+|++|.++.............++....+...
T Consensus        90 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  169 (264)
T 3ucx_A           90 DVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLA  169 (264)
T ss_dssp             SEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCTTCHHHHHHHHHHHH
T ss_pred             cEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCCccHHHHHHHHHHHH
Confidence            9999998642           00               12223333 346999999986554333333334444444444


Q ss_pred             HHHHHh-hhhcccccc
Q 021831          292 LKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       292 ~~~~~~-~~~~~~i~~  306 (307)
                      +-+.+. .+.++||++
T Consensus       170 ~~~~la~e~~~~gi~v  185 (264)
T 3ucx_A          170 MSQTLATELGEKGIRV  185 (264)
T ss_dssp             HHHHHHHHHHTTTCEE
T ss_pred             HHHHHHHHhCccCeEE
Confidence            444443 445667765

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.90  E-value=6.5e-05  Score=64.03  Aligned_cols=133  Identities=23%  Similarity=0.289  Sum_probs=80.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHcCCc---eEEeCCChh-HHHHhc------CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGAE---QAVDYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~g~~---~v~~~~~~~-~~~~~~------~~~dvv  241 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.++++. +. .+.++..   ...|.++.+ ..+.+.      +++|++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   87 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDIL   87 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47899999999999999999999999999998776542 22 2333321   223444432 222221      689999


Q ss_pred             EECCCCh----------hh---------------HHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHHHHHH
Q 021831          242 LDTIGAP----------ET---------------ERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKK  294 (307)
Q Consensus       242 id~~g~~----------~~---------------~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (307)
                      |++.|..          +.               ...++..|  +..|++|.++.............++....+...+-+
T Consensus        88 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~  167 (248)
T 3op4_A           88 VNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTK  167 (248)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHHHHH
Confidence            9998841          11               12333334  356899999876543333333334444444444444


Q ss_pred             HHh-hhhcccccc
Q 021831          295 RMQ-TWYSYGIGC  306 (307)
Q Consensus       295 ~~~-~~~~~~i~~  306 (307)
                      .+. .+.++||++
T Consensus       168 ~la~e~~~~gi~v  180 (248)
T 3op4_A          168 SMAREVASRGVTV  180 (248)
T ss_dssp             HHHHHHGGGTEEE
T ss_pred             HHHHHHHHhCeEE
Confidence            443 445667765

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=97.89  E-value=0.00015  Score=62.47  Aligned_cols=131  Identities=14%  Similarity=0.115  Sum_probs=78.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCC--ceE--EeCCChh-HHHHhc------CCccEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGA--EQA--VDYSSKD-IELAIK------GKFDAVL  242 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~--~~v--~~~~~~~-~~~~~~------~~~dvvi  242 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.++.+  .+++...  ...  .|.++.+ ..+.+.      +++|++|
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   92 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVE--RLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIV   92 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHH--HHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH--HHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence            4689999999999999999999999999998877543  2333221  122  2444432 222221      6899999


Q ss_pred             ECCCCh----------hh---------------HHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHHHHHHH
Q 021831          243 DTIGAP----------ET---------------ERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKR  295 (307)
Q Consensus       243 d~~g~~----------~~---------------~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (307)
                      ++.|..          +.               ...++..+  +..|++|.++.............++....+...+-+.
T Consensus        93 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~a~~~~~~~  172 (266)
T 3p19_A           93 NNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISEN  172 (266)
T ss_dssp             ECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHHHHHHHHHH
Confidence            998841          01               12234444  2569999999765543333333344444444444444


Q ss_pred             Hh-hhhcccccc
Q 021831          296 MQ-TWYSYGIGC  306 (307)
Q Consensus       296 ~~-~~~~~~i~~  306 (307)
                      +. .+..+||++
T Consensus       173 la~e~~~~gi~v  184 (266)
T 3p19_A          173 VREEVAASNVRV  184 (266)
T ss_dssp             HHHHHGGGTCEE
T ss_pred             HHHHhcccCcEE
Confidence            33 455667765

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=97.88  E-value=0.00014  Score=62.13  Aligned_cols=133  Identities=15%  Similarity=0.194  Sum_probs=77.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HHHHHcCCc-eE--EeCCChh-HHHHhc------CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE-QA--VDYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~~~~~g~~-~v--~~~~~~~-~~~~~~------~~~dvv  241 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.++...  +...+++.. ..  .|.++.+ ..+.+.      +++|++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   85 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL   85 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47899999999999999999999999999988765432  223344322 22  2344432 222221      589999


Q ss_pred             EECCCCh--------------hh---------------HHHHHhccc--------CCcEEEEeccCcccccccccceech
Q 021831          242 LDTIGAP--------------ET---------------ERLGLNFLK--------RGGHYMTLHGETAALADHYGLALGL  284 (307)
Q Consensus       242 id~~g~~--------------~~---------------~~~~~~~l~--------~~G~~v~~g~~~~~~~~~~~~~~~~  284 (307)
                      |++.|..              +.               ...++..|.        .+|++|.++.............++.
T Consensus        86 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  165 (257)
T 3tpc_A           86 VNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAA  165 (257)
T ss_dssp             EECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             EECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCcchHH
Confidence            9998842              11               123344443        4689999988765433333334444


Q ss_pred             hHHHHHHHHHHHh-hhhcccccc
Q 021831          285 PIATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       285 ~~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ...+...+-+.+. .+.++||++
T Consensus       166 sKaa~~~~~~~la~e~~~~gi~v  188 (257)
T 3tpc_A          166 SKGGVAALTLPAARELARFGIRV  188 (257)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHHHHHHHHHcCeEE
Confidence            4444444444433 455667765

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.88  E-value=9.9e-05  Score=63.44  Aligned_cols=133  Identities=14%  Similarity=0.184  Sum_probs=78.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHH-------HHHcCCc-eE--EeCCChh-HHHHhc------
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDR-------VLAAGAE-QA--VDYSSKD-IELAIK------  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~-------~~~~g~~-~v--~~~~~~~-~~~~~~------  235 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.+.. +.+.       ++..+.. ..  .|.++.+ ..+.+.      
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   89 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF   89 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            478999999999999999999999999999886542 2111       1222332 12  2444432 222221      


Q ss_pred             CCccEEEECCCCh----------h---------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHHHHH
Q 021831          236 GKFDAVLDTIGAP----------E---------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       236 ~~~dvvid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      +++|++|++.|..          +               ....++..|+++|++|.++.............++....+..
T Consensus        90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  169 (262)
T 3ksu_A           90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYSTYAGNKAPVE  169 (262)
T ss_dssp             CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCCCC-----CHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCCchhHHHHHHHH
Confidence            6899999999831          0               12344556677899999988755333333334445555555


Q ss_pred             HHHHHHh-hhhcccccc
Q 021831          291 LLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~-~~~~~~i~~  306 (307)
                      .+-+.+. .+..+||++
T Consensus       170 ~l~~~la~e~~~~gi~v  186 (262)
T 3ksu_A          170 HYTRAASKELMKQQISV  186 (262)
T ss_dssp             HHHHHHHHHTTTTTCEE
T ss_pred             HHHHHHHHHHHHcCcEE
Confidence            5555444 445667765

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=97.87  E-value=0.0002  Score=61.72  Aligned_cols=131  Identities=18%  Similarity=0.288  Sum_probs=80.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceE--EeCCChh-HHHHhc------CCccEEE
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQA--VDYSSKD-IELAIK------GKFDAVL  242 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v--~~~~~~~-~~~~~~------~~~dvvi  242 (307)
                      -..|+++||+||++++|.+.++.+...|++|+.+.+.....    .+....  .|.++.+ ..+.+.      +++|++|
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv   86 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD----VNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILV   86 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C----TTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc----cCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            35689999999999999999999999999999887654322    111122  3444432 222221      6899999


Q ss_pred             ECCCCh----------hh---------------HHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHHHHHHH
Q 021831          243 DTIGAP----------ET---------------ERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKR  295 (307)
Q Consensus       243 d~~g~~----------~~---------------~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (307)
                      ++.|..          +.               ...++..|  +..|++|.++.............++....+...+-+.
T Consensus        87 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~  166 (269)
T 3vtz_A           87 NNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRS  166 (269)
T ss_dssp             ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHH
T ss_pred             ECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHHHHHHHHHHH
Confidence            998841          01               12333334  3468999998766544444444455555555555555


Q ss_pred             Hhhhhcccccc
Q 021831          296 MQTWYSYGIGC  306 (307)
Q Consensus       296 ~~~~~~~~i~~  306 (307)
                      +.....++|++
T Consensus       167 la~e~~~~i~v  177 (269)
T 3vtz_A          167 VAIDYAPKIRC  177 (269)
T ss_dssp             HHHHHTTTEEE
T ss_pred             HHHHhcCCCEE
Confidence            55444446664

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.87  E-value=0.00029  Score=60.30  Aligned_cols=133  Identities=17%  Similarity=0.251  Sum_probs=76.6

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCccH----HHH-HHcCCceEE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKSI----DRV-LAAGAEQAV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~--g~~G~~~~~~a~~~G~~Vi~~~~~~~~----~~~-~~~g~~~v~--~~~~~~-~~~~~~------~~  237 (307)
                      .+.++||+||+  |++|.+.++.+...|++|+.+.++.+.    +.+ .+.+....+  |.++.+ +.+.+.      ++
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46889999998  999999999888889999988776531    122 223432333  444432 222221      57


Q ss_pred             ccEEEECCCChhh-----------------------------HHHHHhcccCCcEEEEeccCcccccccccceechhHHH
Q 021831          238 FDAVLDTIGAPET-----------------------------ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIAT  288 (307)
Q Consensus       238 ~dvvid~~g~~~~-----------------------------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  288 (307)
                      +|++|++.|....                             ...++..++++|++|.++.............++....+
T Consensus        87 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  166 (261)
T 2wyu_A           87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKAA  166 (261)
T ss_dssp             EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCCchHHHHHHHH
Confidence            9999999884210                             12333444457899999875443222222223333333


Q ss_pred             HHHHHHHHh-hhhcccccc
Q 021831          289 TVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       289 ~~~~~~~~~-~~~~~~i~~  306 (307)
                      ...+-+.+. .+..+||++
T Consensus       167 ~~~~~~~la~e~~~~gi~v  185 (261)
T 2wyu_A          167 LEASVRYLAYELGPKGVRV  185 (261)
T ss_dssp             HHHHHHHHHHHHGGGTCEE
T ss_pred             HHHHHHHHHHHHhhhCcEE
Confidence            433333333 445567765

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.87  E-value=0.00026  Score=60.62  Aligned_cols=133  Identities=18%  Similarity=0.259  Sum_probs=78.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CccH-H----HHHHcCCc-eEE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSI-D----RVLAAGAE-QAV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~~-~----~~~~~g~~-~v~--~~~~~~-~~~~~~------~~  237 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.+ ..+. +    .+++.+.. ..+  |.++.+ ..+.+.      ++
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE   86 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            4789999999999999999999999999988844 3321 1    12333432 222  344432 222221      58


Q ss_pred             ccEEEECCCCh-----------h---------------hHHHHHhcccCCcEEEEeccCccc-ccccccceechhHHHHH
Q 021831          238 FDAVLDTIGAP-----------E---------------TERLGLNFLKRGGHYMTLHGETAA-LADHYGLALGLPIATTV  290 (307)
Q Consensus       238 ~dvvid~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~  290 (307)
                      +|++|++.|..           +               ....++..++++|++|.++..... ........++....+..
T Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~  166 (259)
T 3edm_A           87 IHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGAVM  166 (259)
T ss_dssp             EEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCCcHHHHHHHHHHH
Confidence            99999998742           0               123455566678999999876443 22222333444555555


Q ss_pred             HHHHHHhhhhcccccc
Q 021831          291 LLKKRMQTWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~~~~~~~i~~  306 (307)
                      .+-+.+.....++|++
T Consensus       167 ~l~~~la~e~~~~I~v  182 (259)
T 3edm_A          167 TFTRGLAKEVGPKIRV  182 (259)
T ss_dssp             HHHHHHHHHHTTTCEE
T ss_pred             HHHHHHHHHHCCCCEE
Confidence            5555544433333554

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.86  E-value=0.00026  Score=60.72  Aligned_cols=133  Identities=20%  Similarity=0.188  Sum_probs=78.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eE--EeCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QA--VDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v--~~~~~~~-~~~~~~------~~~  238 (307)
                      .+.++||+||+|++|...++.+...|++|+.+.++... +.    +.+.+.. .+  .|.++.+ ..+.+.      +.+
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i  107 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRC  107 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            57899999999999999999988899999988776432 21    2333432 22  2344332 222111      579


Q ss_pred             cEEEECCCCh-----------hh---------------HHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHH
Q 021831          239 DAVLDTIGAP-----------ET---------------ERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       239 dvvid~~g~~-----------~~---------------~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      |++|++.|..           ..               ...++..+  +..|++|.++.............++....+..
T Consensus       108 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  187 (262)
T 3rkr_A          108 DVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLN  187 (262)
T ss_dssp             SEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHHHHHHH
T ss_pred             CEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHHHHHHH
Confidence            9999998851           00               12333333  35799999998765433333333444444444


Q ss_pred             HHHHHHh-hhhcccccc
Q 021831          291 LLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~-~~~~~~i~~  306 (307)
                      .+-+.+. .+..+||++
T Consensus       188 ~l~~~la~e~~~~gi~v  204 (262)
T 3rkr_A          188 GLMTSAAEELRQHQVRV  204 (262)
T ss_dssp             HHHHHHHHHHGGGTCEE
T ss_pred             HHHHHHHHHhhhcCcEE
Confidence            4433333 444567764

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.86  E-value=0.00034  Score=59.58  Aligned_cols=133  Identities=14%  Similarity=0.176  Sum_probs=75.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHc--C--CceEE--eCCChh-HHHHhc------
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAA--G--AEQAV--DYSSKD-IELAIK------  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~--g--~~~v~--~~~~~~-~~~~~~------  235 (307)
                      .+.++||+||++++|.+.++.+...|++|+.+.++.+. +.    +.+.  +  ....+  |.++.+ ..+.+.      
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY   85 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence            47899999999999999999988899999988776432 22    2222  2  22222  444432 222221      


Q ss_pred             CCccEEEECCCCh---------h---------------hHHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHH
Q 021831          236 GKFDAVLDTIGAP---------E---------------TERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATT  289 (307)
Q Consensus       236 ~~~dvvid~~g~~---------~---------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  289 (307)
                      +++|++|++.|..         +               ....++..|  +..|++|.++.............++....+.
T Consensus        86 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  165 (250)
T 3nyw_A           86 GAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFAL  165 (250)
T ss_dssp             CCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHHHHHHH
Confidence            6899999999851         0               112333333  3569999998876543222233344444444


Q ss_pred             HHHHHHHh-hhhcccccc
Q 021831          290 VLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       290 ~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+-+.+. .+..+||++
T Consensus       166 ~~l~~~la~e~~~~gi~v  183 (250)
T 3nyw_A          166 LGLAESLYRELAPLGIRV  183 (250)
T ss_dssp             HHHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHhhhcCcEE
Confidence            44444433 445667765

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.86  E-value=0.00027  Score=63.39  Aligned_cols=133  Identities=16%  Similarity=0.239  Sum_probs=79.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--------H----HHHHHcCCc-eE--EeCCChh-HHHHhc--
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--------I----DRVLAAGAE-QA--VDYSSKD-IELAIK--  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--------~----~~~~~~g~~-~v--~~~~~~~-~~~~~~--  235 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.++.+        .    +.+++.+.. ..  .|.++.+ ..+.+.  
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~  123 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKA  123 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            4789999999999999999999999999998876543        1    123344432 12  2444432 222221  


Q ss_pred             ----CCccEEEECCCCh----------h---------------hHHHHHhccc--CCcEEEEeccCccccc--cccccee
Q 021831          236 ----GKFDAVLDTIGAP----------E---------------TERLGLNFLK--RGGHYMTLHGETAALA--DHYGLAL  282 (307)
Q Consensus       236 ----~~~dvvid~~g~~----------~---------------~~~~~~~~l~--~~G~~v~~g~~~~~~~--~~~~~~~  282 (307)
                          +++|++|++.|..          .               ....++..|+  .+|++|.++.......  ......+
T Consensus       124 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~~~~~Y  203 (346)
T 3kvo_A          124 IKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAY  203 (346)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTSSSHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCCCchHH
Confidence                6899999999841          0               1133444444  3589999998654322  1222234


Q ss_pred             chhHHHHHHHHHHHhhhhcccccc
Q 021831          283 GLPIATTVLLKKRMQTWYSYGIGC  306 (307)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~i~~  306 (307)
                      +....+...+-+.+.....++|++
T Consensus       204 ~aSKaal~~l~~~la~e~~~gIrv  227 (346)
T 3kvo_A          204 TIAKYGMSMYVLGMAEEFKGEIAV  227 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTCEE
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcEE
Confidence            444444444444444333367764

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.86  E-value=0.00027  Score=60.26  Aligned_cols=133  Identities=16%  Similarity=0.164  Sum_probs=80.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc-eE--EeCCChh-HHHHhc-----CCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE-QA--VDYSSKD-IELAIK-----GKFD  239 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~-~v--~~~~~~~-~~~~~~-----~~~d  239 (307)
                      .+.++||+||++++|.+.++.+...|++|+.+.++.. .+.    +++.+.. ..  .|.++.+ ..+.+.     +++|
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id   85 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLE   85 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCce
Confidence            4789999999999999999999999999999877543 222    2333432 22  2344432 222111     5799


Q ss_pred             EEEECCCChh-------------------------hHHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHHH
Q 021831          240 AVLDTIGAPE-------------------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLL  292 (307)
Q Consensus       240 vvid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  292 (307)
                      ++|++.|...                         ....++..|+  .+|++|.++.............++....+...+
T Consensus        86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l  165 (252)
T 3h7a_A           86 VTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAV  165 (252)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHHHHHHHH
Confidence            9999998410                         0123344443  468999998765543333333444444444444


Q ss_pred             HHHHh-hhhcccccc
Q 021831          293 KKRMQ-TWYSYGIGC  306 (307)
Q Consensus       293 ~~~~~-~~~~~~i~~  306 (307)
                      -+.+. .+..+||++
T Consensus       166 ~~~la~e~~~~gi~v  180 (252)
T 3h7a_A          166 AQSMARELMPKNIHV  180 (252)
T ss_dssp             HHHHHHHHGGGTEEE
T ss_pred             HHHHHHHhhhcCCEE
Confidence            44444 445567765

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.86  E-value=0.0003  Score=59.64  Aligned_cols=132  Identities=17%  Similarity=0.252  Sum_probs=76.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHcCCce-EEeCCChh-HHHHhc------CCccEEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGAEQ-AVDYSSKD-IELAIK------GKFDAVLD  243 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~g~~~-v~~~~~~~-~~~~~~------~~~dvvid  243 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.++.+. +. ..+++... ..|.++.+ +.+.+.      +++|++|+
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn   83 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46789999999999999999999999999988776432 22 33345321 12444432 222221      57999999


Q ss_pred             CCCCh----------hh---------------HHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHHHHHH-
Q 021831          244 TIGAP----------ET---------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKR-  295 (307)
Q Consensus       244 ~~g~~----------~~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-  295 (307)
                      +.|..          +.               ...++..|+  ..|++|.++... .........++........+-+. 
T Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a~~~~~~~l  162 (245)
T 1uls_A           84 YAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAGVVGLTRTL  162 (245)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHHHHHHHHHH
Confidence            98831          00               123344443  358999998765 22222222233333333333333 


Q ss_pred             Hhhhhcccccc
Q 021831          296 MQTWYSYGIGC  306 (307)
Q Consensus       296 ~~~~~~~~i~~  306 (307)
                      ...+..+||++
T Consensus       163 a~e~~~~gi~v  173 (245)
T 1uls_A          163 ALELGRWGIRV  173 (245)
T ss_dssp             HHHHGGGTEEE
T ss_pred             HHHHhHhCeEE
Confidence            33445567764

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.85  E-value=0.00026  Score=60.15  Aligned_cols=133  Identities=17%  Similarity=0.287  Sum_probs=77.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc-eEE--eCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE-QAV--DYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~-~v~--~~~~~~-~~~~~~------~~~  238 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.++.+ .+.    +++.+.. ..+  |.++.+ ..+.+.      +++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   85 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL   85 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999998877543 222    2223432 222  444432 222221      589


Q ss_pred             cEEEECCCCh----------h---------------hHHHHHhcc-cCCcEEEEeccCcccccccccceechhHHHHHHH
Q 021831          239 DAVLDTIGAP----------E---------------TERLGLNFL-KRGGHYMTLHGETAALADHYGLALGLPIATTVLL  292 (307)
Q Consensus       239 dvvid~~g~~----------~---------------~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  292 (307)
                      |++|++.|..          .               ....++..+ +.+|++|.++.............++....+...+
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  165 (247)
T 2jah_A           86 DILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAF  165 (247)
T ss_dssp             SEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCCCCCCcHHHHHHHHHHHH
Confidence            9999998731          0               112333444 3359999998765433322222333333333434


Q ss_pred             HHHH-hhhhcccccc
Q 021831          293 KKRM-QTWYSYGIGC  306 (307)
Q Consensus       293 ~~~~-~~~~~~~i~~  306 (307)
                      -+.+ ..+..+||++
T Consensus       166 ~~~la~e~~~~gi~v  180 (247)
T 2jah_A          166 SETLRQEVTERGVRV  180 (247)
T ss_dssp             HHHHHHHHGGGTCEE
T ss_pred             HHHHHHHhcccCcEE
Confidence            3333 3445667765

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=97.85  E-value=0.0002  Score=62.02  Aligned_cols=133  Identities=20%  Similarity=0.256  Sum_probs=79.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H----HHHHcCC---c-eE--EeCCChh-HHHHhc------
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGA---E-QA--VDYSSKD-IELAIK------  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~----~~~~~g~---~-~v--~~~~~~~-~~~~~~------  235 (307)
                      .+.++||+||++++|.+.++.+...|++|+.+.++.+. +    .+++.+.   . ..  .|.++.+ ..+.+.      
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH   89 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999999988766432 1    1233332   1 12  2444432 222221      


Q ss_pred             CCccEEEECCCCh-----------h---------------hHHHHHhcc--cCCcEEEEeccCcccccccccceechhHH
Q 021831          236 GKFDAVLDTIGAP-----------E---------------TERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIA  287 (307)
Q Consensus       236 ~~~dvvid~~g~~-----------~---------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  287 (307)
                      +++|++|++.|..           +               ....++..+  +.+|++|.++.............++....
T Consensus        90 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  169 (281)
T 3svt_A           90 GRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKS  169 (281)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhHHHHHH
Confidence            5899999999850           0               112344444  34689999987654333333333444444


Q ss_pred             HHHHHHHHHh-hhhcccccc
Q 021831          288 TTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       288 ~~~~~~~~~~-~~~~~~i~~  306 (307)
                      +...+-+.+. .+..+||++
T Consensus       170 a~~~l~~~la~e~~~~gi~v  189 (281)
T 3svt_A          170 AVDHLMQLAADELGASWVRV  189 (281)
T ss_dssp             HHHHHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHHHhhhcCeEE
Confidence            4444444433 445667765

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.85  E-value=0.00049  Score=58.68  Aligned_cols=132  Identities=17%  Similarity=0.212  Sum_probs=76.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHH-HHHcCCceEE--eCCChh-HHHHhc------CCccEEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR-VLAAGAEQAV--DYSSKD-IELAIK------GKFDAVLD  243 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~-~~~~g~~~v~--~~~~~~-~~~~~~------~~~dvvid  243 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.+..+.+. .+++.. ..+  |.++.+ +.+.+.      +++|++|+
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~   83 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLVN   83 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4688999999999999999999999999998876644322 334432 333  333332 222221      57999999


Q ss_pred             CCCChh----------h---------------HHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHHHHHHH
Q 021831          244 TIGAPE----------T---------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM  296 (307)
Q Consensus       244 ~~g~~~----------~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (307)
                      +.|...          .               ...++..|+  ..|++|.++.............++........+-+.+
T Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l  163 (256)
T 2d1y_A           84 NAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSL  163 (256)
T ss_dssp             CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHHHHHHHHHHH
Confidence            987410          0               122344443  3589999987654322222223333333333333333


Q ss_pred             h-hhhcccccc
Q 021831          297 Q-TWYSYGIGC  306 (307)
Q Consensus       297 ~-~~~~~~i~~  306 (307)
                      . .+..++|++
T Consensus       164 a~e~~~~gi~v  174 (256)
T 2d1y_A          164 ALDLAPLRIRV  174 (256)
T ss_dssp             HHHHGGGTEEE
T ss_pred             HHHHhhcCeEE
Confidence            3 444556664

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=97.84  E-value=0.00022  Score=60.21  Aligned_cols=72  Identities=21%  Similarity=0.271  Sum_probs=49.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCce-EEeCCChhHHHH---hc---CCccEEEECCCC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQ-AVDYSSKDIELA---IK---GKFDAVLDTIGA  247 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~---~~---~~~dvvid~~g~  247 (307)
                      +.++||+||+|++|.+.++.+...|++|+.+.++.+. ..++++... ..|.++.+..+.   +.   +++|++|++.|.
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv~~Ag~   80 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE-AAQSLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAAAV   80 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH-HHHHHTCEEEECCTTTSCHHHHHHHHHHHHTSCCEEEECCCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHhhCcEEEecCCchHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence            5789999999999999999999999999998776543 334445321 123333222222   11   579999999874

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.84  E-value=0.00024  Score=60.40  Aligned_cols=133  Identities=17%  Similarity=0.147  Sum_probs=77.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cH-H-HHHHcCCc-eE--EeCCChh-HHHHhc------CCccE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SI-D-RVLAAGAE-QA--VDYSSKD-IELAIK------GKFDA  240 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~-~-~~~~~g~~-~v--~~~~~~~-~~~~~~------~~~dv  240 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.+.. +. + .+++.+.. ..  .|.++.+ ..+.+.      +++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   85 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            478999999999999999999999999999887765 32 2 23444532 22  2444432 222221      68999


Q ss_pred             EEECCCCh----------hh---------------HHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHHHH
Q 021831          241 VLDTIGAP----------ET---------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLLK  293 (307)
Q Consensus       241 vid~~g~~----------~~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  293 (307)
                      +|++.|..          +.               ...++..++  ..|++|.++.............++........+-
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~  165 (249)
T 2ew8_A           86 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFT  165 (249)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHHHHHHHHH
Confidence            99998841          00               123333343  3689999987654332222223333333333333


Q ss_pred             HHHh-hhhcccccc
Q 021831          294 KRMQ-TWYSYGIGC  306 (307)
Q Consensus       294 ~~~~-~~~~~~i~~  306 (307)
                      +.+. .+..+||++
T Consensus       166 ~~la~e~~~~gi~v  179 (249)
T 2ew8_A          166 RALASDLGKDGITV  179 (249)
T ss_dssp             HHHHHHHGGGTEEE
T ss_pred             HHHHHHHHhcCcEE
Confidence            3333 444567764

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.83  E-value=0.00037  Score=60.25  Aligned_cols=133  Identities=18%  Similarity=0.263  Sum_probs=79.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHH-HH---HcCCc-eE--EeCCChh-HH---HHhc--CCccE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR-VL---AAGAE-QA--VDYSSKD-IE---LAIK--GKFDA  240 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~-~~---~~g~~-~v--~~~~~~~-~~---~~~~--~~~dv  240 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.+.++.+. ++   +.+.. ..  .|.++.+ ..   +.+.  +++|+
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~  109 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDV  109 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcE
Confidence            4789999999999999999999999999988876654322 22   22322 22  2333332 11   1111  58999


Q ss_pred             EEECCCChh----------h---------------HHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHHHHH
Q 021831          241 VLDTIGAPE----------T---------------ERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTVLLK  293 (307)
Q Consensus       241 vid~~g~~~----------~---------------~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  293 (307)
                      +|++.|...          .               ...++..|  +..|++|.++.............++....+...+-
T Consensus       110 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~  189 (273)
T 3uf0_A          110 LVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLT  189 (273)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHHHHHHHHH
Confidence            999988420          0               12233333  34689999987655433333334444444444444


Q ss_pred             HHHh-hhhcccccc
Q 021831          294 KRMQ-TWYSYGIGC  306 (307)
Q Consensus       294 ~~~~-~~~~~~i~~  306 (307)
                      +.+. .+..+||++
T Consensus       190 ~~la~e~~~~gI~v  203 (273)
T 3uf0_A          190 RALASEWAGRGVGV  203 (273)
T ss_dssp             HHHHHHHGGGTEEE
T ss_pred             HHHHHHHhhcCcEE
Confidence            4443 445667765

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=97.83  E-value=0.0003  Score=60.93  Aligned_cols=133  Identities=17%  Similarity=0.202  Sum_probs=80.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-------------cHH----HHHHcCCce-E--EeCCChh-HHH
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-------------SID----RVLAAGAEQ-A--VDYSSKD-IEL  232 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-------------~~~----~~~~~g~~~-v--~~~~~~~-~~~  232 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.+++             +.+    .+++.+... .  .|.++.+ ..+
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   88 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            478999999999999999999999999999887642             111    123344332 2  2444432 222


Q ss_pred             Hhc------CCccEEEECCCChh----------h---------------HHHHHhcc--cCCcEEEEeccCccccccccc
Q 021831          233 AIK------GKFDAVLDTIGAPE----------T---------------ERLGLNFL--KRGGHYMTLHGETAALADHYG  279 (307)
Q Consensus       233 ~~~------~~~dvvid~~g~~~----------~---------------~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~  279 (307)
                      .+.      +++|++|++.|...          .               ...++..|  +..|++|.++...........
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  168 (281)
T 3s55_A           89 FVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQ  168 (281)
T ss_dssp             HHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCTTC
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCCCC
Confidence            221      68999999988410          1               12233333  356999999976554333333


Q ss_pred             ceechhHHHHHHHHHHHh-hhhcccccc
Q 021831          280 LALGLPIATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ..++....+...+-+.+. .+..+||++
T Consensus       169 ~~Y~asK~a~~~~~~~la~e~~~~gi~v  196 (281)
T 3s55_A          169 ASYVSSKWGVIGLTKCAAHDLVGYGITV  196 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEE
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEE
Confidence            344444444444444444 445667775

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.83  E-value=0.00018  Score=61.46  Aligned_cols=133  Identities=17%  Similarity=0.235  Sum_probs=80.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eEE--eCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QAV--DYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v~--~~~~~~-~~~~~~------~~~  238 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.++.+. +.    +++.+.. ..+  |.++.+ ..+.+.      +++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   90 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKI   90 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999888889999988776432 21    2333432 222  334432 222221      589


Q ss_pred             cEEEECCCChh---------h---------------HHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHHH
Q 021831          239 DAVLDTIGAPE---------T---------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLL  292 (307)
Q Consensus       239 dvvid~~g~~~---------~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  292 (307)
                      |++|++.|...         .               ...++..|+  .+|++|.++.............++....+...+
T Consensus        91 d~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  170 (256)
T 3gaf_A           91 TVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHL  170 (256)
T ss_dssp             CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHHHHHHHHH
Confidence            99999988420         1               123334443  468999998765543333333444444444444


Q ss_pred             HHHHh-hhhcccccc
Q 021831          293 KKRMQ-TWYSYGIGC  306 (307)
Q Consensus       293 ~~~~~-~~~~~~i~~  306 (307)
                      -+.+. .+.++||++
T Consensus       171 ~~~la~e~~~~gi~v  185 (256)
T 3gaf_A          171 TRNIAFDVGPMGIRV  185 (256)
T ss_dssp             HHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHhhhCcEE
Confidence            44444 445567765

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.82  E-value=0.00022  Score=61.59  Aligned_cols=133  Identities=20%  Similarity=0.249  Sum_probs=79.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCceE---EeCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAEQA---VDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~~v---~~~~~~~-~~~~~~------~~~  238 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.++.+. +.    +++.+....   .|.++.+ ..+.+.      +++
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  104 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDV  104 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            47899999999999999999999999999888765432 11    233343322   2333332 222221      579


Q ss_pred             cEEEECCCCh----------hh---------------HHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHH
Q 021831          239 DAVLDTIGAP----------ET---------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVL  291 (307)
Q Consensus       239 dvvid~~g~~----------~~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  291 (307)
                      |++|++.|..          +.               ...++..+.  ..|++|.++.............++....+...
T Consensus       105 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~~~  184 (271)
T 4ibo_A          105 DILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKM  184 (271)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHHHHHHH
Confidence            9999998841          11               123344442  45899999876554333333334444444444


Q ss_pred             HHHHHh-hhhcccccc
Q 021831          292 LKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       292 ~~~~~~-~~~~~~i~~  306 (307)
                      +-+.+. .+..+||++
T Consensus       185 l~~~la~e~~~~gI~v  200 (271)
T 4ibo_A          185 LTRAMAAEWAQYGIQA  200 (271)
T ss_dssp             HHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHhhhCeEE
Confidence            444443 455667765

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.82  E-value=0.00018  Score=61.24  Aligned_cols=131  Identities=18%  Similarity=0.215  Sum_probs=77.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEE-eCCChhHHHHhc--CCccEEEECCCChh
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAV-DYSSKDIELAIK--GKFDAVLDTIGAPE  249 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~--~~~dvvid~~g~~~  249 (307)
                      -.|.++||+||+|++|.+.++.+...|++|+.+.++.  +.+++++....+ |. ..+......  .++|++|++.|...
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~D~-~~~~~~~~~~~~~iD~lv~~Ag~~~   93 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE--ELLKRSGHRYVVCDL-RKDLDLLFEKVKEVDILVLNAGGPK   93 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHTCSEEEECCT-TTCHHHHHHHSCCCSEEEECCCCCC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH--HHHHhhCCeEEEeeH-HHHHHHHHHHhcCCCEEEECCCCCC
Confidence            4588999999999999999999989999999887765  334444532222 22 123332222  37999999987310


Q ss_pred             ----------h---------------HHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHHHHHHH-hhhhc
Q 021831          250 ----------T---------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM-QTWYS  301 (307)
Q Consensus       250 ----------~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  301 (307)
                                .               ...++..++  ..|++|.++.............++....+...+-+.+ ..+..
T Consensus        94 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~  173 (249)
T 1o5i_A           94 AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAP  173 (249)
T ss_dssp             CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHHHHHHHHHHHHHHHHhhh
Confidence                      0               123344443  3489999987654332222222333333333333333 34455


Q ss_pred             ccccc
Q 021831          302 YGIGC  306 (307)
Q Consensus       302 ~~i~~  306 (307)
                      +||++
T Consensus       174 ~gi~v  178 (249)
T 1o5i_A          174 YGITV  178 (249)
T ss_dssp             GTEEE
T ss_pred             cCeEE
Confidence            67764

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.82  E-value=0.00019  Score=61.70  Aligned_cols=133  Identities=19%  Similarity=0.219  Sum_probs=80.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcC--Cc-eE--EeCCChhH-HHHhc--CCccE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAG--AE-QA--VDYSSKDI-ELAIK--GKFDA  240 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g--~~-~v--~~~~~~~~-~~~~~--~~~dv  240 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.++.+. +.    +++.+  .. ..  .|.++.+. .+.+.  +++|+
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~   88 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDI   88 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence            47899999999999999999998999999998776432 11    22222  21 11  23444332 22222  58999


Q ss_pred             EEECCCCh----------hh---------------HHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHHHHH
Q 021831          241 VLDTIGAP----------ET---------------ERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTVLLK  293 (307)
Q Consensus       241 vid~~g~~----------~~---------------~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  293 (307)
                      +|++.|..          +.               ...++..+  +.+|++|.++.............++....+...+-
T Consensus        89 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~  168 (267)
T 3t4x_A           89 LINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLS  168 (267)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHHHHHHHHHHH
Confidence            99998841          11               23334444  34689999987665444333344444455555444


Q ss_pred             HHHh-hhhcccccc
Q 021831          294 KRMQ-TWYSYGIGC  306 (307)
Q Consensus       294 ~~~~-~~~~~~i~~  306 (307)
                      +.+. .+..+||++
T Consensus       169 ~~la~e~~~~gi~v  182 (267)
T 3t4x_A          169 RSLAELTTGTNVTV  182 (267)
T ss_dssp             HHHHHHTTTSEEEE
T ss_pred             HHHHHHhCCCCeEE
Confidence            4444 445667765

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.82  E-value=0.00034  Score=59.56  Aligned_cols=133  Identities=15%  Similarity=0.140  Sum_probs=79.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHc-C-CceE--EeC--CCh-hHHHHhc------
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAA-G-AEQA--VDY--SSK-DIELAIK------  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~-g-~~~v--~~~--~~~-~~~~~~~------  235 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.++.+. +.    +.+. + ....  .|.  .+. +..+.+.      
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   90 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNY   90 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhC
Confidence            57899999999999999999998999999988776432 21    1121 2 1122  233  222 2222211      


Q ss_pred             CCccEEEECCCCh-----------h---------------hHHHHHhcc--cCCcEEEEeccCcccccccccceechhHH
Q 021831          236 GKFDAVLDTIGAP-----------E---------------TERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIA  287 (307)
Q Consensus       236 ~~~dvvid~~g~~-----------~---------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  287 (307)
                      +++|++|++.|..           +               ....++..|  +.+|++|.++.............++....
T Consensus        91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  170 (252)
T 3f1l_A           91 PRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKF  170 (252)
T ss_dssp             SCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhHHHHH
Confidence            5799999998841           0               012344444  35689999987655433333344555555


Q ss_pred             HHHHHHHHHhhhhcccccc
Q 021831          288 TTVLLKKRMQTWYSYGIGC  306 (307)
Q Consensus       288 ~~~~~~~~~~~~~~~~i~~  306 (307)
                      +...+-+.+.....++|++
T Consensus       171 a~~~l~~~la~e~~~~irv  189 (252)
T 3f1l_A          171 ATEGMMQVLADEYQQRLRV  189 (252)
T ss_dssp             HHHHHHHHHHHHTTTTCEE
T ss_pred             HHHHHHHHHHHHhcCCcEE
Confidence            5555555555443333543

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.82  E-value=0.00021  Score=62.72  Aligned_cols=133  Identities=19%  Similarity=0.237  Sum_probs=78.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eE--EeCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QA--VDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v--~~~~~~~-~~~~~~------~~~  238 (307)
                      .|.++||+||+|++|.+.++.+...|++|+.+.++... +.    ++..+.. ..  .|.++.+ ..+.+.      +++
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  109 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGV  109 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            57899999999999999999999999999998776432 22    2233432 22  2444432 222221      589


Q ss_pred             cEEEECCCCh----------h---------------hHHHHHhcccC---CcEEEEeccCcccccccccceechhHHHHH
Q 021831          239 DAVLDTIGAP----------E---------------TERLGLNFLKR---GGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       239 dvvid~~g~~----------~---------------~~~~~~~~l~~---~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      |++|++.|..          +               ....++..+..   +|++|.++.............++....+..
T Consensus       110 d~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  189 (301)
T 3tjr_A          110 DVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVV  189 (301)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHHHHH
Confidence            9999998831          0               11233333432   689999987655433333333444444444


Q ss_pred             HHHHHHh-hhhcccccc
Q 021831          291 LLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~-~~~~~~i~~  306 (307)
                      .+-+.+. .+..+||++
T Consensus       190 ~~~~~la~e~~~~gi~v  206 (301)
T 3tjr_A          190 GLAETLAREVKPNGIGV  206 (301)
T ss_dssp             HHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHhcccCcEE
Confidence            4444433 344556664

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=97.82  E-value=0.00024  Score=60.67  Aligned_cols=132  Identities=17%  Similarity=0.173  Sum_probs=77.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCc-eE--EeCCChh-HHHHhc-----CCccEEEEC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE-QA--VDYSSKD-IELAIK-----GKFDAVLDT  244 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~-~v--~~~~~~~-~~~~~~-----~~~dvvid~  244 (307)
                      .+.++||+||++++|.+.++.+...|++|+.+.+.. .+...+++.. ..  .|.++.+ ..+.+.     +++|++|++
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~n   86 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRG-EDVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVNC   86 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC-HHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCch-HHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEEC
Confidence            468899999999999999998888999999887743 3334445532 22  2334332 222111     589999999


Q ss_pred             CCChh--------------h---------------HHHHHhcc----------cCCcEEEEeccCcccccccccceechh
Q 021831          245 IGAPE--------------T---------------ERLGLNFL----------KRGGHYMTLHGETAALADHYGLALGLP  285 (307)
Q Consensus       245 ~g~~~--------------~---------------~~~~~~~l----------~~~G~~v~~g~~~~~~~~~~~~~~~~~  285 (307)
                      .|...              .               ...++..+          +.+|++|.++.............++..
T Consensus        87 Ag~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  166 (257)
T 3tl3_A           87 AGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSAS  166 (257)
T ss_dssp             GGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHHHHHHHHH
T ss_pred             CCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCCCccHHHH
Confidence            98420              0               12233334          346899999887654333333334444


Q ss_pred             HHHHHHHHHHHh-hhhcccccc
Q 021831          286 IATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       286 ~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+...+-+.+. .+..+||++
T Consensus       167 Kaa~~~~~~~la~e~~~~gI~v  188 (257)
T 3tl3_A          167 KGGVVGMTLPIARDLASHRIRV  188 (257)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHHHHHhcccCcEE
Confidence            444444444443 455667765

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.81  E-value=0.00019  Score=61.97  Aligned_cols=133  Identities=17%  Similarity=0.252  Sum_probs=79.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H----HHHHcCCc-e--EEeCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAE-Q--AVDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~----~~~~~g~~-~--v~~~~~~~-~~~~~~------~~~  238 (307)
                      .+.++||+||++++|.+.++.+...|++|+.+.+.... +    .+++.+.. .  ..|.++.+ ..+.+.      +++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGAL  106 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999998999999998776432 1    12333322 2  23444432 222221      589


Q ss_pred             cEEEECCCCh----------hh---------------HHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHHH
Q 021831          239 DAVLDTIGAP----------ET---------------ERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTVL  291 (307)
Q Consensus       239 dvvid~~g~~----------~~---------------~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  291 (307)
                      |++|++.|..          +.               ...++..+  +.+|++|.++.............++....+...
T Consensus       107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  186 (270)
T 3ftp_A          107 NVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAG  186 (270)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHHHHHHH
Confidence            9999998831          00               12333333  467999999876543333333334444444444


Q ss_pred             HHHHHh-hhhcccccc
Q 021831          292 LKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       292 ~~~~~~-~~~~~~i~~  306 (307)
                      +-+.+. .+..+||++
T Consensus       187 l~~~la~e~~~~gI~v  202 (270)
T 3ftp_A          187 MTRALAREIGSRGITV  202 (270)
T ss_dssp             HHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHhhhCeEE
Confidence            444433 445667765

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.81  E-value=0.00026  Score=60.80  Aligned_cols=133  Identities=17%  Similarity=0.166  Sum_probs=80.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHH-cCCc--eE--EeCCChh-HH---HHhc---C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLA-AGAE--QA--VDYSSKD-IE---LAIK---G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~-~g~~--~v--~~~~~~~-~~---~~~~---~  236 (307)
                      .+.++||+||++++|.+.++.+...|++|+.+.++.+. +.    +.+ .+..  ..  .|.++.+ ..   +.+.   +
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG   86 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999988776432 21    222 3322  22  2444432 22   2221   6


Q ss_pred             CccEEEECCCCh----------h---------------hHHHHHhccc--CCcEEEEeccCcccccccccceechhHHHH
Q 021831          237 KFDAVLDTIGAP----------E---------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATT  289 (307)
Q Consensus       237 ~~dvvid~~g~~----------~---------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  289 (307)
                      ++|++|++.|..          +               ....++..+.  .+|++|.++.............++....+.
T Consensus        87 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  166 (265)
T 3lf2_A           87 CASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGV  166 (265)
T ss_dssp             SCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHHHHHHH
Confidence            899999999841          0               1133444453  368999998765543333334444444555


Q ss_pred             HHHHHHHh-hhhcccccc
Q 021831          290 VLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       290 ~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+-+.+. .+.++||++
T Consensus       167 ~~l~~~la~e~~~~gi~v  184 (265)
T 3lf2_A          167 KNLVRSMAFEFAPKGVRV  184 (265)
T ss_dssp             HHHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHhcccCeEE
Confidence            54444444 455667775

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=97.81  E-value=0.00034  Score=59.97  Aligned_cols=133  Identities=22%  Similarity=0.268  Sum_probs=77.2

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCccH-HH---H-HHcCCceEE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKSI-DR---V-LAAGAEQAV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~--g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~---~-~~~g~~~v~--~~~~~~-~~~~~~------~~  237 (307)
                      .+.++||+||+  |++|.+.++.+...|++|+.+.++.+. +.   + ...+....+  |.++.+ ..+.+.      ++
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   87 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46889999998  999999999998999999988765421 11   2 222332333  444432 222221      47


Q ss_pred             ccEEEECCCChh------------h------------------HHHHHhcccCCcEEEEeccCcccccccccceechhHH
Q 021831          238 FDAVLDTIGAPE------------T------------------ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIA  287 (307)
Q Consensus       238 ~dvvid~~g~~~------------~------------------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  287 (307)
                      +|++|++.|...            .                  ...++..++++|++|.++.............++....
T Consensus        88 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  167 (265)
T 1qsg_A           88 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKA  167 (265)
T ss_dssp             EEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHHHH
T ss_pred             CCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCCchHHHHHHH
Confidence            999999987421            0                  1234445555799999987544322222222333344


Q ss_pred             HHHHHHHHHh-hhhcccccc
Q 021831          288 TTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       288 ~~~~~~~~~~-~~~~~~i~~  306 (307)
                      +...+-+.+. .+..+||++
T Consensus       168 a~~~~~~~la~e~~~~gi~v  187 (265)
T 1qsg_A          168 SLEANVRYMANAMGPEGVRV  187 (265)
T ss_dssp             HHHHHHHHHHHHHTTTTEEE
T ss_pred             HHHHHHHHHHHHhhhcCeEE
Confidence            4444433333 444557764

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=97.81  E-value=0.00019  Score=58.77  Aligned_cols=60  Identities=25%  Similarity=0.422  Sum_probs=43.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChh-HHHHhc--CCccEEEECCC
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD-IELAIK--GKFDAVLDTIG  246 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~--~~~dvvid~~g  246 (307)
                      ++||+||+|.+|...++.+. .|++|+.+.+...         ....|..+.+ +.+.+.  +++|++|++.|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~---------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG---------DVTVDITNIDSIKKMYEQVGKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS---------SEECCTTCHHHHHHHHHHHCCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc---------ceeeecCCHHHHHHHHHHhCCCCEEEECCC
Confidence            79999999999999998888 8999999877653         1223444432 222222  46899999987

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=97.81  E-value=0.0002  Score=61.62  Aligned_cols=132  Identities=17%  Similarity=0.236  Sum_probs=76.7

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeCCccH--HH-HHHcCCc-eE--EeCCChh-HHHHhc------C--
Q 021831          174 EGQRLLVLGG--GGAVGFAAVQFSVASGCHVSATCGSKSI--DR-VLAAGAE-QA--VDYSSKD-IELAIK------G--  236 (307)
Q Consensus       174 ~g~~VlI~Ga--~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~-~~~~g~~-~v--~~~~~~~-~~~~~~------~--  236 (307)
                      .+.++||+|+  ++++|.+.++.+...|++|+.+.++.+.  +. .++++.. ..  .|.++.+ ..+.+.      +  
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4789999998  8999999999999999999988776532  22 2333321 12  3444432 222221      4  


Q ss_pred             -CccEEEECCCChh------------------------------hHHHHHhcccCCcEEEEeccCcccccccccceechh
Q 021831          237 -KFDAVLDTIGAPE------------------------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLP  285 (307)
Q Consensus       237 -~~dvvid~~g~~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~  285 (307)
                       ++|++|++.|...                              ....++..++++|++|.++..... .......++..
T Consensus        86 ~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~-~~~~~~~Y~as  164 (269)
T 2h7i_A           86 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR-AMPAYNWMTVA  164 (269)
T ss_dssp             CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS-CCTTTHHHHHH
T ss_pred             CCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccc-ccCchHHHHHH
Confidence             7999999987421                              123445556667999999865431 11111112233


Q ss_pred             HHHHHHHHHHH-hhhhcccccc
Q 021831          286 IATTVLLKKRM-QTWYSYGIGC  306 (307)
Q Consensus       286 ~~~~~~~~~~~-~~~~~~~i~~  306 (307)
                      ..+...+-+.+ ..+..+||++
T Consensus       165 Kaa~~~l~~~la~e~~~~gi~v  186 (269)
T 2h7i_A          165 KSALESVNRFVAREAGKYGVRS  186 (269)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEE
T ss_pred             HHHHHHHHHHHHHHhcccCcEE
Confidence            33333333333 3445567765

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.81  E-value=0.00024  Score=60.87  Aligned_cols=133  Identities=17%  Similarity=0.204  Sum_probs=79.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCccH-HH----HHHcCCc-eEE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKSI-DR----VLAAGAE-QAV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~-~~~~~~-~~----~~~~g~~-~v~--~~~~~~-~~~~~~------~~  237 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+ .++... +.    +++.+.. ..+  |.++.+ ..+.+.      ++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999998886 554332 11    2233432 222  334432 222221      67


Q ss_pred             ccEEEECCCCh----------h---------------hHHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHH
Q 021831          238 FDAVLDTIGAP----------E---------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       238 ~dvvid~~g~~----------~---------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      +|++|++.|..          +               ....++..|+  .+|++|.++.............++....+..
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  162 (258)
T 3oid_A           83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALE  162 (258)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHHHH
Confidence            99999999731          0               0123344443  3689999987655433333334444444444


Q ss_pred             HHHHHHh-hhhcccccc
Q 021831          291 LLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~-~~~~~~i~~  306 (307)
                      .+-+.+. .+..+||++
T Consensus       163 ~l~~~la~e~~~~gi~v  179 (258)
T 3oid_A          163 ALTRYLAVELSPKQIIV  179 (258)
T ss_dssp             HHHHHHHHHTGGGTEEE
T ss_pred             HHHHHHHHHHhhcCcEE
Confidence            4444444 445567765

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.80  E-value=0.00042  Score=59.93  Aligned_cols=133  Identities=17%  Similarity=0.149  Sum_probs=78.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc-eEE--eCCChh-HHHHh---c--CCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE-QAV--DYSSKD-IELAI---K--GKFD  239 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~-~v~--~~~~~~-~~~~~---~--~~~d  239 (307)
                      .|+++||+||++++|.+.++.+...|++|+.+.++.. .+.    +++.+.. ..+  |.++.+ ..+.+   .  +++|
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD  111 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVD  111 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence            4789999999999999999999999999998876543 221    2333432 222  333322 22211   1  5899


Q ss_pred             EEEECCCCh----------h---------------hHHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHHHH
Q 021831          240 AVLDTIGAP----------E---------------TERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTVLL  292 (307)
Q Consensus       240 vvid~~g~~----------~---------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  292 (307)
                      ++|++.|..          +               ....++..|  +.+|++|.++.............++....+...+
T Consensus       112 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l  191 (275)
T 4imr_A          112 ILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHNL  191 (275)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHHHHHHHHH
Confidence            999999841          0               112333444  3569999998765543222222244444444444


Q ss_pred             HHHHh-hhhcccccc
Q 021831          293 KKRMQ-TWYSYGIGC  306 (307)
Q Consensus       293 ~~~~~-~~~~~~i~~  306 (307)
                      -+.+. .+..+||++
T Consensus       192 ~~~la~e~~~~gI~v  206 (275)
T 4imr_A          192 IQSQARDFAGDNVLL  206 (275)
T ss_dssp             HHHHHHHHGGGTEEE
T ss_pred             HHHHHHHhcccCcEE
Confidence            44433 445667765

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.79  E-value=4.6e-05  Score=68.82  Aligned_cols=96  Identities=27%  Similarity=0.326  Sum_probs=69.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEe---------CC-----------ChhHHH
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVD---------YS-----------SKDIEL  232 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~---------~~-----------~~~~~~  232 (307)
                      ++.+|+|+|+ |.+|+.+++.++.+|++|++..++ ++.+.++++|++.+..         +.           ..++.+
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            6799999995 999999999999999999888554 5567788888753310         00           011222


Q ss_pred             HhcCCccEEEECCCChh------hHHHHHhcccCCcEEEEeccCc
Q 021831          233 AIKGKFDAVLDTIGAPE------TERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       233 ~~~~~~dvvid~~g~~~------~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .+ .++|+||.++..+.      .....++.|++++.+|.++.+.
T Consensus       262 ~l-~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~  305 (381)
T 3p2y_A          262 AI-TKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGET  305 (381)
T ss_dssp             HH-TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGG
T ss_pred             HH-hcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCC
Confidence            22 67999999963321      2367889999999999998554

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.79  E-value=8.2e-05  Score=67.71  Aligned_cols=95  Identities=27%  Similarity=0.323  Sum_probs=68.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEe-------------CCC-----------h
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVD-------------YSS-----------K  228 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~-------------~~~-----------~  228 (307)
                      ++.+|+|+|+ |.+|+.+++.++.+|++|++..+. .+.+.++++|.+.+..             +..           .
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            5799999995 999999999999999999888554 4566778888753211             110           1


Q ss_pred             hHHHHhcCCccEEEECCCChh------hHHHHHhcccCCcEEEEeccC
Q 021831          229 DIELAIKGKFDAVLDTIGAPE------TERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       229 ~~~~~~~~~~dvvid~~g~~~------~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ++.+.+ .+.|+||.++..+.      .-...++.|++|..+|.++..
T Consensus       268 ~l~e~l-~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d  314 (405)
T 4dio_A          268 LVAEHI-AKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVE  314 (405)
T ss_dssp             HHHHHH-HTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGG
T ss_pred             HHHHHh-cCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCC
Confidence            222222 46999999964321      236788999999999999853

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=97.79  E-value=0.0004  Score=59.98  Aligned_cols=133  Identities=20%  Similarity=0.257  Sum_probs=78.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--------HHH----HHHcCCc-e--EEeCCChh-HH---HHh
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--------IDR----VLAAGAE-Q--AVDYSSKD-IE---LAI  234 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--------~~~----~~~~g~~-~--v~~~~~~~-~~---~~~  234 (307)
                      .|+++||+||++++|.+.++.+...|++|+.+.++..        .+.    ++..+.. .  ..|.++.+ ..   +.+
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   84 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT   84 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            4789999999999999999999899999998876542        111    2233432 1  22444432 22   222


Q ss_pred             c---CCccEEEECCCCh----------h---------------hHHHHHhcc--cCCcEEEEeccCccccc--cccccee
Q 021831          235 K---GKFDAVLDTIGAP----------E---------------TERLGLNFL--KRGGHYMTLHGETAALA--DHYGLAL  282 (307)
Q Consensus       235 ~---~~~dvvid~~g~~----------~---------------~~~~~~~~l--~~~G~~v~~g~~~~~~~--~~~~~~~  282 (307)
                      .   +++|++|++.|..          +               ....++..|  +.+|++|.++.......  ......+
T Consensus        85 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y  164 (274)
T 3e03_A           85 VDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGY  164 (274)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHHCHHH
T ss_pred             HHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCCCchH
Confidence            1   6899999999841          0               113344444  34689999987654332  1222234


Q ss_pred             chhHHHHHHHHHHHh-hhhcccccc
Q 021831          283 GLPIATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       283 ~~~~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      +....+...+-+.+. .+..+||++
T Consensus       165 ~asKaal~~l~~~la~e~~~~gI~v  189 (274)
T 3e03_A          165 TLAKMGMSLVTLGLAAEFGPQGVAI  189 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCEEE
Confidence            444444444444443 455667765

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=97.79  E-value=0.00073  Score=58.59  Aligned_cols=133  Identities=20%  Similarity=0.234  Sum_probs=77.0

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCccH----HHHH-HcCCceEE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKSI----DRVL-AAGAEQAV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~--g~~G~~~~~~a~~~G~~Vi~~~~~~~~----~~~~-~~g~~~v~--~~~~~~-~~~~~~------~~  237 (307)
                      .|.++||+||+  |++|.++++.+...|++|+.+.++.+.    +.+. ..+....+  |.++.+ ..+.+.      ++
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS   99 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            47899999998  899999999988899999988776531    1122 23322233  444432 222221      57


Q ss_pred             ccEEEECCCChh-----------------------------hHHHHHhccc-CCcEEEEeccCcccccccccceechhHH
Q 021831          238 FDAVLDTIGAPE-----------------------------TERLGLNFLK-RGGHYMTLHGETAALADHYGLALGLPIA  287 (307)
Q Consensus       238 ~dvvid~~g~~~-----------------------------~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~~~~~~  287 (307)
                      +|++|++.|...                             ....++..+. .+|++|.++.............++....
T Consensus       100 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  179 (285)
T 2p91_A          100 LDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMGIAKA  179 (285)
T ss_dssp             CCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTTTHHHHHHH
T ss_pred             CCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCccHHHHHHH
Confidence            999999987421                             0123344444 5699999987544322222222333444


Q ss_pred             HHHHHHHHHh-hhhcccccc
Q 021831          288 TTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       288 ~~~~~~~~~~-~~~~~~i~~  306 (307)
                      +...+-+.+. .+..+||++
T Consensus       180 a~~~~~~~la~e~~~~gi~v  199 (285)
T 2p91_A          180 ALESTVRYLAYDIAKHGHRI  199 (285)
T ss_dssp             HHHHHHHHHHHHHHTTTCEE
T ss_pred             HHHHHHHHHHHHhcccCcEE
Confidence            4444443333 344557765

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.79  E-value=0.00036  Score=59.62  Aligned_cols=133  Identities=17%  Similarity=0.260  Sum_probs=79.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHc---CCc-eE--EeCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAA---GAE-QA--VDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~---g~~-~v--~~~~~~~-~~~~~~------~~~  238 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.++.+. +. ..++   +.. ..  .|.++.+ ..+.+.      +++
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   84 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI   84 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999988776432 22 2222   222 22  2444432 222221      589


Q ss_pred             cEEEECCCCh----------hh---------------HHHHHhcc-c--CCcEEEEeccCcccccccccceechhHHHHH
Q 021831          239 DAVLDTIGAP----------ET---------------ERLGLNFL-K--RGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       239 dvvid~~g~~----------~~---------------~~~~~~~l-~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      |++|++.|..          +.               ...++..| +  .+|++|.++.............++....+..
T Consensus        85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  164 (257)
T 3imf_A           85 DILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVL  164 (257)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHHHHHH
Confidence            9999999831          00               12333333 2  3689999987655433333333444455555


Q ss_pred             HHHHHHhh-hh-cccccc
Q 021831          291 LLKKRMQT-WY-SYGIGC  306 (307)
Q Consensus       291 ~~~~~~~~-~~-~~~i~~  306 (307)
                      .+-+.+.. +. ++||++
T Consensus       165 ~l~~~la~e~~~~~gIrv  182 (257)
T 3imf_A          165 AMTKTLAVEWGRKYGIRV  182 (257)
T ss_dssp             HHHHHHHHHHHHHHCCEE
T ss_pred             HHHHHHHHHhccccCeEE
Confidence            55554443 33 457765

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=97.78  E-value=0.00028  Score=61.00  Aligned_cols=133  Identities=19%  Similarity=0.228  Sum_probs=79.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-------------c-cHHH----HHHcCCc-eE--EeCCChh-HH
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-------------K-SIDR----VLAAGAE-QA--VDYSSKD-IE  231 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-------------~-~~~~----~~~~g~~-~v--~~~~~~~-~~  231 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.+.             . +.+.    +...+.. ..  .|.++.+ ..
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR   89 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            47899999999999999999999999999988652             1 1111    2233332 22  2444432 22


Q ss_pred             HHhc------CCccEEEECCCChh-------------------------hHHHHHhccc---CCcEEEEeccCccccccc
Q 021831          232 LAIK------GKFDAVLDTIGAPE-------------------------TERLGLNFLK---RGGHYMTLHGETAALADH  277 (307)
Q Consensus       232 ~~~~------~~~dvvid~~g~~~-------------------------~~~~~~~~l~---~~G~~v~~g~~~~~~~~~  277 (307)
                      +.+.      +++|++|++.|...                         ....++..+.   .+|++|.++.........
T Consensus        90 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  169 (277)
T 3tsc_A           90 KVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQP  169 (277)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCS
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCCC
Confidence            2221      67999999988410                         1123333343   268999999866544433


Q ss_pred             ccceechhHHHHHHHHHHHh-hhhcccccc
Q 021831          278 YGLALGLPIATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ....++....+...+-+.+. .+..+||++
T Consensus       170 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v  199 (277)
T 3tsc_A          170 FMIHYTASKHAVTGLARAFAAELGKHSIRV  199 (277)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhCccCeEE
Confidence            33444455555555544444 445667765

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.78  E-value=0.00022  Score=61.82  Aligned_cols=99  Identities=20%  Similarity=0.298  Sum_probs=64.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC------------cc-HHH----HHHcCCc-eE--EeCCChh-HHH
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS------------KS-IDR----VLAAGAE-QA--VDYSSKD-IEL  232 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~------------~~-~~~----~~~~g~~-~v--~~~~~~~-~~~  232 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.+.            .+ .+.    ++..+.. ..  .|.++.+ ..+
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   88 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR   88 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            47899999999999999999999999999988654            11 111    2233432 22  2444432 222


Q ss_pred             Hhc------CCccEEEECCCCh--------h---------------hHHHHHhcccCCcEEEEeccCcc
Q 021831          233 AIK------GKFDAVLDTIGAP--------E---------------TERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       233 ~~~------~~~dvvid~~g~~--------~---------------~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      .+.      +++|++|++.|..        +               ....++..++.+|++|.++....
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  157 (287)
T 3pxx_A           89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAG  157 (287)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHH
T ss_pred             HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchh
Confidence            221      5899999998841        0               12445566778899999987543

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=97.78  E-value=0.0002  Score=61.97  Aligned_cols=133  Identities=17%  Similarity=0.338  Sum_probs=80.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HHHH----HcCCc-eEE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVL----AAGAE-QAV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~~~----~~g~~-~v~--~~~~~~-~~~~~~------~~  237 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.++...  +...    ..+.. ..+  |.++.+ ..+.+.      ++
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~  105 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGR  105 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999988776432  1122    22432 222  444432 222221      68


Q ss_pred             ccEEEECCCCh----------hh---------------HHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHH
Q 021831          238 FDAVLDTIGAP----------ET---------------ERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       238 ~dvvid~~g~~----------~~---------------~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      +|++|++.|..          +.               ...++..+  +.+|++|.++.............++....+..
T Consensus       106 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  185 (277)
T 4fc7_A          106 IDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVD  185 (277)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHHHHHH
Confidence            99999999831          00               12233333  34799999987655433333334444444444


Q ss_pred             HHHHHHh-hhhcccccc
Q 021831          291 LLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~-~~~~~~i~~  306 (307)
                      .+-+.+. .+..+||++
T Consensus       186 ~l~~~la~e~~~~gi~v  202 (277)
T 4fc7_A          186 AMTRHLAVEWGPQNIRV  202 (277)
T ss_dssp             HHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHhhhcCeEE
Confidence            4444443 455667765

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.78  E-value=0.00045  Score=58.26  Aligned_cols=74  Identities=28%  Similarity=0.437  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHcCCceEE--eCCChh-HHHHhc--CCccEEEECCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAAGAEQAV--DYSSKD-IELAIK--GKFDAVLDTIG  246 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~g~~~v~--~~~~~~-~~~~~~--~~~dvvid~~g  246 (307)
                      ++.++||+||+|.+|...++.+...|++|+.+.++.+ .+. ..++....++  |..+.+ +.+.+.  +++|++|++.|
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag   85 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCc
Confidence            4789999999999999999999999999998877643 222 2333222333  333332 333333  46899999988


Q ss_pred             C
Q 021831          247 A  247 (307)
Q Consensus       247 ~  247 (307)
                      .
T Consensus        86 ~   86 (244)
T 3d3w_A           86 V   86 (244)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.78  E-value=0.00023  Score=61.67  Aligned_cols=133  Identities=17%  Similarity=0.226  Sum_probs=79.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-------------c-cHHH----HHHcCCce-E--EeCCChh-HH
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-------------K-SIDR----VLAAGAEQ-A--VDYSSKD-IE  231 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-------------~-~~~~----~~~~g~~~-v--~~~~~~~-~~  231 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.+.             . +.+.    ++..+... .  .|.++.+ ..
T Consensus        14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   93 (280)
T 3pgx_A           14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALR   93 (280)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            57899999999999999999999999999988652             1 1111    22334321 2  2444432 22


Q ss_pred             HHhc------CCccEEEECCCCh----------hh---------------HHHHHhccc---CCcEEEEeccCccccccc
Q 021831          232 LAIK------GKFDAVLDTIGAP----------ET---------------ERLGLNFLK---RGGHYMTLHGETAALADH  277 (307)
Q Consensus       232 ~~~~------~~~dvvid~~g~~----------~~---------------~~~~~~~l~---~~G~~v~~g~~~~~~~~~  277 (307)
                      +.+.      +++|++|++.|..          +.               ...++..|.   .+|++|.++.........
T Consensus        94 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  173 (280)
T 3pgx_A           94 ELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATP  173 (280)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCT
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCCC
Confidence            2221      6899999998841          01               123344442   278999998765543333


Q ss_pred             ccceechhHHHHHHHHHHHh-hhhcccccc
Q 021831          278 YGLALGLPIATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ....++....+...+-+.+. .+..+||++
T Consensus       174 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v  203 (280)
T 3pgx_A          174 GNGHYSASKHGLTALTNTLAIELGEYGIRV  203 (280)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence            33344444444444444443 445567765

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=97.78  E-value=0.00026  Score=61.38  Aligned_cols=133  Identities=21%  Similarity=0.191  Sum_probs=81.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHcCCc-eEE--eCCChh-HH---HHhc---CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGAE-QAV--DYSSKD-IE---LAIK---GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~g~~-~v~--~~~~~~-~~---~~~~---~~~dvv  241 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.++.+. +. ..+.+.. ..+  |.++.+ ..   +.+.   +++|++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   83 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL   83 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            47899999999999999999999999999998776432 22 3344432 222  333322 22   2221   689999


Q ss_pred             EECCCChh------------------------------hHHHHHhcc-cCCcEEEEeccCcccccccccceechhHHHHH
Q 021831          242 LDTIGAPE------------------------------TERLGLNFL-KRGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       242 id~~g~~~------------------------------~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      |++.|...                              ....++..+ +.+|++|.++.............++....+..
T Consensus        84 vnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  163 (281)
T 3zv4_A           84 IPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTATKHAVV  163 (281)
T ss_dssp             ECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSSCHHHHHHHHHHH
T ss_pred             EECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCCCchhHHHHHHHH
Confidence            99988410                              012333333 35799999987665444444444555555555


Q ss_pred             HHHHHHhhhhcccccc
Q 021831          291 LLKKRMQTWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~~~~~~~i~~  306 (307)
                      .+-+.+.....++|++
T Consensus       164 ~l~~~la~e~~~~Irv  179 (281)
T 3zv4_A          164 GLVRQMAFELAPHVRV  179 (281)
T ss_dssp             HHHHHHHHHHTTTSEE
T ss_pred             HHHHHHHHHhcCCCEE
Confidence            5555555443333654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=97.78  E-value=0.00029  Score=60.97  Aligned_cols=133  Identities=21%  Similarity=0.264  Sum_probs=78.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHcCCc-eEE--eCCChh-HHHHhc------CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAAGAE-QAV--DYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~g~~-~v~--~~~~~~-~~~~~~------~~~dvv  241 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.++.+ .+. ..+++.. ..+  |.++.+ +.+.+.      +++|++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   83 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL   83 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            4678999999999999999999999999999877643 232 3444432 222  333332 222221      589999


Q ss_pred             EECCCChh----------h---------------HHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHHHHH
Q 021831          242 LDTIGAPE----------T---------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLLKK  294 (307)
Q Consensus       242 id~~g~~~----------~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (307)
                      |++.|...          .               ...++..++  ..|++|.++.............++........+-+
T Consensus        84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  163 (281)
T 3m1a_A           84 VNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSE  163 (281)
T ss_dssp             EECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHH
T ss_pred             EECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHHHHHHHH
Confidence            99988420          0               234444443  46899999876553332222233333333333333


Q ss_pred             HHh-hhhcccccc
Q 021831          295 RMQ-TWYSYGIGC  306 (307)
Q Consensus       295 ~~~-~~~~~~i~~  306 (307)
                      .+. .+..+||++
T Consensus       164 ~la~e~~~~gi~v  176 (281)
T 3m1a_A          164 GLADEVAPFGIKV  176 (281)
T ss_dssp             HHHHHHGGGTEEE
T ss_pred             HHHHHhhccCcEE
Confidence            333 344557664

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.77  E-value=0.00024  Score=59.97  Aligned_cols=132  Identities=17%  Similarity=0.182  Sum_probs=78.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHcCCc-eE--EeCCChh-HHHHhc------CCccEEE
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGAE-QA--VDYSSKD-IELAIK------GKFDAVL  242 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~g~~-~v--~~~~~~~-~~~~~~------~~~dvvi  242 (307)
                      +.++||+||++++|.+.++.+...|++|+.+.++.+. +. ..+++.. ..  .|.++.+ ..+.+.      +++|++|
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv   82 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL   82 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence            5789999999999999999988999999998776432 22 2333221 12  2344432 222221      5799999


Q ss_pred             ECCCChh----------h---------------HHHHHhcc-cCCcEEEEeccCcccccccccceechhHHHHHHHHHHH
Q 021831          243 DTIGAPE----------T---------------ERLGLNFL-KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM  296 (307)
Q Consensus       243 d~~g~~~----------~---------------~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (307)
                      ++.|...          .               ...++..+ +.+|++|.++.............++....+...+-+.+
T Consensus        83 nnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~l  162 (235)
T 3l6e_A           83 HCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKANESLYCASKWGMRGFLESL  162 (235)
T ss_dssp             EECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSSHHHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCCCcHHHHHHHHHHHHHHHH
Confidence            9988420          0               13344444 45679998887554333333333444444444444444


Q ss_pred             h-hhhcccccc
Q 021831          297 Q-TWYSYGIGC  306 (307)
Q Consensus       297 ~-~~~~~~i~~  306 (307)
                      . .+..+||++
T Consensus       163 a~e~~~~gi~v  173 (235)
T 3l6e_A          163 RAELKDSPLRL  173 (235)
T ss_dssp             HHHTTTSSEEE
T ss_pred             HHHhhccCCEE
Confidence            3 445567765

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.77  E-value=0.00026  Score=61.53  Aligned_cols=133  Identities=20%  Similarity=0.262  Sum_probs=78.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHc---CCc-eEE--eCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAA---GAE-QAV--DYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~---g~~-~v~--~~~~~~-~~~~~~------~~~  238 (307)
                      .+.++||+||++++|.+.++.+...|++|+.+.++.+. +. ..++   +.. ..+  |.++.+ ..+.+.      +++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL  106 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999999988776432 22 2222   322 222  344432 222221      689


Q ss_pred             cEEEECCCChh--------------------------hHHHHHhcc--cCCcEEEEeccCcccc--cccccceechhHHH
Q 021831          239 DAVLDTIGAPE--------------------------TERLGLNFL--KRGGHYMTLHGETAAL--ADHYGLALGLPIAT  288 (307)
Q Consensus       239 dvvid~~g~~~--------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~~  288 (307)
                      |++|++.|...                          ....++..|  +.+|++|.++......  .......++....+
T Consensus       107 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~asKaa  186 (283)
T 3v8b_A          107 DIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAA  186 (283)
T ss_dssp             CEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHHHHHHH
Confidence            99999988410                          012334444  3468999998765432  22222334444444


Q ss_pred             HHHHHHHHh-hhhcccccc
Q 021831          289 TVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       289 ~~~~~~~~~-~~~~~~i~~  306 (307)
                      ...+-+.+. .+..+||++
T Consensus       187 ~~~l~~~la~e~~~~gI~v  205 (283)
T 3v8b_A          187 QVAIVQQLALELGKHHIRV  205 (283)
T ss_dssp             HHHHHHHHHHHTTTTTEEE
T ss_pred             HHHHHHHHHHHhCccCcEE
Confidence            444444433 455667765

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=97.77  E-value=0.00013  Score=63.10  Aligned_cols=100  Identities=21%  Similarity=0.221  Sum_probs=66.5

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCc-cHHHH----HHcCCceEEeCCChhHHHHhc-CCcc
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSK-SIDRV----LAAGAEQAVDYSSKDIELAIK-GKFD  239 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~-~~~~~----~~~g~~~v~~~~~~~~~~~~~-~~~d  239 (307)
                      ....++++++||-.|+ |. |..+..+++..  +.+|+++..+. ..+.+    +..+...-+.....++.+.+. +.||
T Consensus       106 ~~~~~~~~~~VLDiG~-G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D  183 (277)
T 1o54_A          106 MMLDVKEGDRIIDTGV-GS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVD  183 (277)
T ss_dssp             HHTTCCTTCEEEEECC-TT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSEE
T ss_pred             HHhCCCCCCEEEEECC-cC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCccC
Confidence            4668899999999994 44 88888999885  45899885443 33333    334541111111112222232 4699


Q ss_pred             EEEECCCCh-hhHHHHHhcccCCcEEEEecc
Q 021831          240 AVLDTIGAP-ETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       240 vvid~~g~~-~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      +|+...+.. ..+..+.+.|+++|.++....
T Consensus       184 ~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  214 (277)
T 1o54_A          184 ALFLDVPDPWNYIDKCWEALKGGGRFATVCP  214 (277)
T ss_dssp             EEEECCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred             EEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence            999877765 578889999999999998764

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=97.77  E-value=0.00032  Score=59.67  Aligned_cols=130  Identities=20%  Similarity=0.275  Sum_probs=76.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCc-eEEeCCChh-HHHHhc------CCccEEEECC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE-QAVDYSSKD-IELAIK------GKFDAVLDTI  245 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~-~v~~~~~~~-~~~~~~------~~~dvvid~~  245 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.++.+.   ++.+.. ...|.++.+ +.+.+.      +++|++|++.
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~A   82 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---EQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAA   82 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---SCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---hcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            46899999999999999999999999999998776542   112321 112444432 222222      5799999998


Q ss_pred             CCh----------h---------------hHHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHHHHHHHh-
Q 021831          246 GAP----------E---------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ-  297 (307)
Q Consensus       246 g~~----------~---------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  297 (307)
                      |..          .               ....++..|+  ..|++|.++.............++........+-+.+. 
T Consensus        83 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~  162 (250)
T 2fwm_X           83 GILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGL  162 (250)
T ss_dssp             CCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence            841          0               1123333332  46999999876543322222233333333433333333 


Q ss_pred             hhhcccccc
Q 021831          298 TWYSYGIGC  306 (307)
Q Consensus       298 ~~~~~~i~~  306 (307)
                      .+.++||++
T Consensus       163 e~~~~gi~v  171 (250)
T 2fwm_X          163 ELAGSGVRC  171 (250)
T ss_dssp             HHGGGTCEE
T ss_pred             HhCccCCEE
Confidence            444567765

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=97.77  E-value=0.00026  Score=60.39  Aligned_cols=133  Identities=16%  Similarity=0.206  Sum_probs=77.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHcCCc-eE--EeCCChh-HHHHhc------CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGAE-QA--VDYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~g~~-~v--~~~~~~~-~~~~~~------~~~dvv  241 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.+..+. +. .++++.. ..  .|.++.+ +.+.+.      +++|++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47899999999999999999999999999988776432 22 3334322 22  2444432 222222      579999


Q ss_pred             EECCCChh----------hH---------------HHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHHHHH
Q 021831          242 LDTIGAPE----------TE---------------RLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLLKK  294 (307)
Q Consensus       242 id~~g~~~----------~~---------------~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (307)
                      |++.|...          .+               ..++..++  ..|++|.++.............++........+-+
T Consensus        84 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~  163 (254)
T 1hdc_A           84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSK  163 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHHHHHHHH
Confidence            99987410          01               23444453  36899999876543222222233333333333333


Q ss_pred             HHh-hhhcccccc
Q 021831          295 RMQ-TWYSYGIGC  306 (307)
Q Consensus       295 ~~~-~~~~~~i~~  306 (307)
                      .+. .+..+||++
T Consensus       164 ~la~e~~~~gi~v  176 (254)
T 1hdc_A          164 LAAVELGTDRIRV  176 (254)
T ss_dssp             HHHHHHGGGTEEE
T ss_pred             HHHHHhhhcCeEE
Confidence            333 444567664

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.76  E-value=6.3e-05  Score=65.69  Aligned_cols=98  Identities=15%  Similarity=0.198  Sum_probs=69.2

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHH----HHcCCc--eEEeCCChhHHHHhcCCccEE
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRV----LAAGAE--QAVDYSSKDIELAIKGKFDAV  241 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~----~~~g~~--~v~~~~~~~~~~~~~~~~dvv  241 (307)
                      .+++++|++||.+| +|+.++.++.+++..|++|+++..+.. .+.+    ++.|.+  .++..+..++.   .+.||+|
T Consensus       117 la~l~~g~rVLDIG-cG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~---d~~FDvV  192 (298)
T 3fpf_A          117 LGRFRRGERAVFIG-GGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID---GLEFDVL  192 (298)
T ss_dssp             HTTCCTTCEEEEEC-CCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG---GCCCSEE
T ss_pred             HcCCCCcCEEEEEC-CCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC---CCCcCEE
Confidence            56889999999999 577777777788888999999965543 3333    344542  23333333321   3679999


Q ss_pred             EECCCCh---hhHHHHHhcccCCcEEEEeccC
Q 021831          242 LDTIGAP---ETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       242 id~~g~~---~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      +.+....   ..+..+.+.|+|||+++.....
T Consensus       193 ~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~~  224 (298)
T 3fpf_A          193 MVAALAEPKRRVFRNIHRYVDTETRIIYRTYT  224 (298)
T ss_dssp             EECTTCSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred             EECCCccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence            9765542   4688899999999999987654

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.76  E-value=0.0005  Score=59.01  Aligned_cols=133  Identities=19%  Similarity=0.214  Sum_probs=77.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HH---Hc--CCc-eE--EeCCChh-HHHHhc------C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VL---AA--GAE-QA--VDYSSKD-IELAIK------G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~---~~--g~~-~v--~~~~~~~-~~~~~~------~  236 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.++.+. +. .+   +.  +.. ..  .|.++.+ +.+.+.      +
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   91 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   91 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999998899999988776432 21 12   21  332 22  2444432 222221      5


Q ss_pred             CccEEEECCCChh-----------h---------------HHHHHhccc--CCcEEEEeccCcccccccccceechhHHH
Q 021831          237 KFDAVLDTIGAPE-----------T---------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIAT  288 (307)
Q Consensus       237 ~~dvvid~~g~~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  288 (307)
                      ++|++|++.|...           .               ...++..++  ..|++|.++.............++....+
T Consensus        92 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  171 (267)
T 1iy8_A           92 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHG  171 (267)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHHH
T ss_pred             CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHHHHHH
Confidence            7999999987320           1               123444443  35899999876543322222233333333


Q ss_pred             HHHHHHHH-hhhhcccccc
Q 021831          289 TVLLKKRM-QTWYSYGIGC  306 (307)
Q Consensus       289 ~~~~~~~~-~~~~~~~i~~  306 (307)
                      ...+-+.+ ..+..+||++
T Consensus       172 ~~~~~~~la~e~~~~gi~v  190 (267)
T 1iy8_A          172 VVGLTRNSAVEYGRYGIRI  190 (267)
T ss_dssp             HHHHHHHHHHHHGGGTCEE
T ss_pred             HHHHHHHHHHHHHhcCeEE
Confidence            33333333 3445567765

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=97.76  E-value=0.00047  Score=60.37  Aligned_cols=133  Identities=21%  Similarity=0.206  Sum_probs=79.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-------------cH----HHHHHcCCce-E--EeCCChh-HHH
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-------------SI----DRVLAAGAEQ-A--VDYSSKD-IEL  232 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-------------~~----~~~~~~g~~~-v--~~~~~~~-~~~  232 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.+.+             +.    ..++..+... .  .|.++.+ ..+
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  106 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA  106 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence            478999999999999999999999999999886541             11    1123444332 2  2444432 222


Q ss_pred             Hhc------CCccEEEECCCCh-----------h---------------hHHHHHhcc---cCCcEEEEeccCccccccc
Q 021831          233 AIK------GKFDAVLDTIGAP-----------E---------------TERLGLNFL---KRGGHYMTLHGETAALADH  277 (307)
Q Consensus       233 ~~~------~~~dvvid~~g~~-----------~---------------~~~~~~~~l---~~~G~~v~~g~~~~~~~~~  277 (307)
                      .+.      +++|++|++.|..           +               ....++..|   +.+|++|.++.........
T Consensus       107 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~  186 (299)
T 3t7c_A          107 AVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAE  186 (299)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCCT
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC
Confidence            221      6899999998731           0               012233333   2468999998765543333


Q ss_pred             ccceechhHHHHHHHHHHHh-hhhcccccc
Q 021831          278 YGLALGLPIATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ....++....+...+-+.+. .+..+||++
T Consensus       187 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~v  216 (299)
T 3t7c_A          187 NIGNYIASKHGLHGLMRTMALELGPRNIRV  216 (299)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcccCcEE
Confidence            33344444444444444444 445667765

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=97.76  E-value=0.00032  Score=60.48  Aligned_cols=133  Identities=20%  Similarity=0.335  Sum_probs=76.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHcCCceEE--eCCChh-HHHHhc------CCccEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGAEQAV--DYSSKD-IELAIK------GKFDAVL  242 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~g~~~v~--~~~~~~-~~~~~~------~~~dvvi  242 (307)
                      .|.++||+||+|++|.+.++.+...|++|+.+.++.+. +. ..++.....+  |.++.+ ..+.+.      +++|++|
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   87 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   87 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            47899999999999999999999999999988765432 22 2333322233  334332 222221      5799999


Q ss_pred             ECCCChh--------------------------hHHHHHhcc-cCCcEEEEeccCcccccccccceechhHHHHHHHHHH
Q 021831          243 DTIGAPE--------------------------TERLGLNFL-KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKR  295 (307)
Q Consensus       243 d~~g~~~--------------------------~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (307)
                      ++.|...                          ....++..| +.+|++|.++.............++........+-+.
T Consensus        88 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~  167 (270)
T 1yde_A           88 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKA  167 (270)
T ss_dssp             ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCCCcccHHHHHHHHHHHHH
Confidence            9987420                          012233333 2479999998754322222222333334444433333


Q ss_pred             Hh-hhhcccccc
Q 021831          296 MQ-TWYSYGIGC  306 (307)
Q Consensus       296 ~~-~~~~~~i~~  306 (307)
                      +. .+.++||++
T Consensus       168 la~e~~~~gi~v  179 (270)
T 1yde_A          168 LALDESPYGVRV  179 (270)
T ss_dssp             HHHHHGGGTCEE
T ss_pred             HHHHhhhhCcEE
Confidence            33 445567765

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=97.76  E-value=0.00049  Score=59.67  Aligned_cols=133  Identities=16%  Similarity=0.246  Sum_probs=75.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-Ccc-HH----HHHHcCCc-eEE--eCCCh-hHHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKS-ID----RVLAAGAE-QAV--DYSSK-DIELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~-~~----~~~~~g~~-~v~--~~~~~-~~~~~~~------~~  237 (307)
                      .+.++||+||++++|.+.++.+...|++|+.+.+ +.+ .+    .+...+.. ..+  |.++. +..+.+.      ++
T Consensus        28 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  107 (280)
T 4da9_A           28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGR  107 (280)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999988864 322 11    12333432 222  44443 2222222      58


Q ss_pred             ccEEEECCCCh------------hh---------------HHHHHhcccC-----CcEEEEeccCcccccccccceechh
Q 021831          238 FDAVLDTIGAP------------ET---------------ERLGLNFLKR-----GGHYMTLHGETAALADHYGLALGLP  285 (307)
Q Consensus       238 ~dvvid~~g~~------------~~---------------~~~~~~~l~~-----~G~~v~~g~~~~~~~~~~~~~~~~~  285 (307)
                      +|++|++.|..            +.               ...++..+..     +|++|.++.............++..
T Consensus       108 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  187 (280)
T 4da9_A          108 IDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMS  187 (280)
T ss_dssp             CCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHHHHH
T ss_pred             CCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHHHHH
Confidence            99999998851            00               1234444432     6899999876654333333334444


Q ss_pred             HHHHHHHHHHHh-hhhcccccc
Q 021831          286 IATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       286 ~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+...+-+.+. .+..+||++
T Consensus       188 Kaa~~~l~~~la~e~~~~gI~v  209 (280)
T 4da9_A          188 KAGLAAFSQGLALRLAETGIAV  209 (280)
T ss_dssp             HHHHHHHHHHHHHHHTTTTEEE
T ss_pred             HHHHHHHHHHHHHHHHHhCcEE
Confidence            444444444443 445567765

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=97.76  E-value=0.00034  Score=59.72  Aligned_cols=133  Identities=17%  Similarity=0.165  Sum_probs=79.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H-HHHHcCCc-eE--EeCCChh-HHHHhc------CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAGAE-QA--VDYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~-~~~~~g~~-~v--~~~~~~~-~~~~~~------~~~dvv  241 (307)
                      .+.++||+||++++|.+.++.+...|++|+.+.++... + ...+++.. ..  .|.++.+ ..+.+.      +++|++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   87 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL   87 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            47899999999999999999999999999998776542 2 23444432 22  2333332 222221      579999


Q ss_pred             EECCCChh-----------h---------------HHHHHhcccC------CcEEEEeccCcccccccccceechhHHHH
Q 021831          242 LDTIGAPE-----------T---------------ERLGLNFLKR------GGHYMTLHGETAALADHYGLALGLPIATT  289 (307)
Q Consensus       242 id~~g~~~-----------~---------------~~~~~~~l~~------~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  289 (307)
                      |++.|...           .               ...++..+..      .|+++.++.............++....+.
T Consensus        88 i~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~  167 (261)
T 3n74_A           88 VNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWV  167 (261)
T ss_dssp             EECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHHHHHHH
T ss_pred             EECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHHHHHHH
Confidence            99987421           0               1233444432      57899998765543333333344444444


Q ss_pred             HHHHHHHh-hhhcccccc
Q 021831          290 VLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       290 ~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+-+.+. .+..++|++
T Consensus       168 ~~~~~~la~e~~~~gi~v  185 (261)
T 3n74_A          168 VSVTKALAIELAPAKIRV  185 (261)
T ss_dssp             HHHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHhhhcCcEE
Confidence            44444444 445567765

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.76  E-value=0.00026  Score=60.02  Aligned_cols=133  Identities=18%  Similarity=0.252  Sum_probs=76.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-Ccc-HHH----HHHcCCc-eEE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKS-IDR----VLAAGAE-QAV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~-~~~----~~~~g~~-~v~--~~~~~~-~~~~~~------~~  237 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.+ +.+ .+.    +++.+.. ..+  |.++.+ +.+.+.      ++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ   82 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3678999999999999999999999999998876 432 211    2233432 222  444432 222222      57


Q ss_pred             ccEEEECCCChh----------h---------------HHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHH
Q 021831          238 FDAVLDTIGAPE----------T---------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       238 ~dvvid~~g~~~----------~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      +|++|++.|...          .               ...++..|+  ..|++|.++.............++.......
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  162 (246)
T 2uvd_A           83 VDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVI  162 (246)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHHHH
Confidence            999999988420          0               233444442  4589999987654322222222333333333


Q ss_pred             HHHHHH-hhhhcccccc
Q 021831          291 LLKKRM-QTWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~-~~~~~~~i~~  306 (307)
                      .+-+.+ ..+..+||++
T Consensus       163 ~~~~~la~e~~~~gi~v  179 (246)
T 2uvd_A          163 GLTKTSAKELASRNITV  179 (246)
T ss_dssp             HHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHhhhcCeEE
Confidence            333333 3445567764

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.75  E-value=0.00062  Score=58.33  Aligned_cols=133  Identities=19%  Similarity=0.168  Sum_probs=78.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcC--CceEE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAG--AEQAV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g--~~~v~--~~~~~~-~~~~~~------~~  237 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.++.+. +.    +++.+  ....+  |.++.+ ..+.+.      ++
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG   88 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999999988776432 21    22333  12222  344432 222221      58


Q ss_pred             ccEEEECCCCh----------hh---------------HHHHHhccc--CCcEEEEeccCccc-ccccccceechhHHHH
Q 021831          238 FDAVLDTIGAP----------ET---------------ERLGLNFLK--RGGHYMTLHGETAA-LADHYGLALGLPIATT  289 (307)
Q Consensus       238 ~dvvid~~g~~----------~~---------------~~~~~~~l~--~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~  289 (307)
                      +|++|++.|..          +.               ...++..|.  ..|++|.++..... ........++....+.
T Consensus        89 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~  168 (262)
T 3pk0_A           89 IDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQ  168 (262)
T ss_dssp             CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhHHHHHHH
Confidence            99999998831          01               123344442  46899999876543 2222223334444444


Q ss_pred             HHHHHHH-hhhhcccccc
Q 021831          290 VLLKKRM-QTWYSYGIGC  306 (307)
Q Consensus       290 ~~~~~~~-~~~~~~~i~~  306 (307)
                      ..+-+.+ ..+..+||++
T Consensus       169 ~~l~~~la~e~~~~gi~v  186 (262)
T 3pk0_A          169 LGFMRTAAIELAPHKITV  186 (262)
T ss_dssp             HHHHHHHHHHHGGGTCEE
T ss_pred             HHHHHHHHHHHHhhCcEE
Confidence            4444443 3555667775

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.75  E-value=0.00031  Score=60.38  Aligned_cols=133  Identities=19%  Similarity=0.218  Sum_probs=79.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHH-cCCc-eE--EeCCChh-HHH---Hhc---CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLA-AGAE-QA--VDYSSKD-IEL---AIK---GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~-~g~~-~v--~~~~~~~-~~~---~~~---~~  237 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.++.+. +.    +.+ .+.. +.  .|.++.+ ..+   .+.   ++
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   98 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGG   98 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999988776432 21    222 3432 22  2444432 222   221   68


Q ss_pred             ccEEEECCCChh----------h---------------HHHHHhccc---CCcEEEEeccCcccccccccceechhHHHH
Q 021831          238 FDAVLDTIGAPE----------T---------------ERLGLNFLK---RGGHYMTLHGETAALADHYGLALGLPIATT  289 (307)
Q Consensus       238 ~dvvid~~g~~~----------~---------------~~~~~~~l~---~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  289 (307)
                      +|++|++.|...          .               ...++..+.   .+|++|.++.............++....+.
T Consensus        99 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  178 (266)
T 4egf_A           99 LDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGL  178 (266)
T ss_dssp             CSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHHHHHH
Confidence            999999988420          0               123334443   268999998765543333333444444444


Q ss_pred             HHHHHHHh-hhhcccccc
Q 021831          290 VLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       290 ~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+-+.+. .+..+||++
T Consensus       179 ~~l~~~la~e~~~~gI~v  196 (266)
T 4egf_A          179 VMATKVLARELGPHGIRA  196 (266)
T ss_dssp             HHHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHHhhhCeEE
Confidence            44444443 445667765

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.75  E-value=0.00039  Score=59.45  Aligned_cols=133  Identities=16%  Similarity=0.195  Sum_probs=76.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HH-HHHc----CCc-eEE--eCCChh-HHHHhc------C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR-VLAA----GAE-QAV--DYSSKD-IELAIK------G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~-~~~~----g~~-~v~--~~~~~~-~~~~~~------~  236 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.++.+.  +. ..++    +.. ..+  |.++.+ +.+.+.      +
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            46889999999999999999999999999988765432  22 2221    432 222  444332 222222      5


Q ss_pred             CccEEEECCCChh-------------------------hHHHHHhccc--CCcEEEEeccCcccccccccceechhHHHH
Q 021831          237 KFDAVLDTIGAPE-------------------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATT  289 (307)
Q Consensus       237 ~~dvvid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  289 (307)
                      ++|++|++.|...                         ....++..|+  ..|++|.++.............++......
T Consensus        83 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  162 (260)
T 1x1t_A           83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGV  162 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHHHH
Confidence            7999999987421                         1123344442  358999998765432222222333333434


Q ss_pred             HHHHHHHh-hhhcccccc
Q 021831          290 VLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       290 ~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+-+.+. .+..+||++
T Consensus       163 ~~~~~~la~e~~~~gi~v  180 (260)
T 1x1t_A          163 VGFTKVTALETAGQGITA  180 (260)
T ss_dssp             HHHHHHHHHHHTTTTEEE
T ss_pred             HHHHHHHHHHhccCCEEE
Confidence            33333333 444567764

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.75  E-value=0.00042  Score=59.77  Aligned_cols=133  Identities=19%  Similarity=0.277  Sum_probs=77.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eE--EeCCChh-HHHHhc-------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QA--VDYSSKD-IELAIK-------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v--~~~~~~~-~~~~~~-------~~  237 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.++.+. +.    +++.+.. ..  .|..+.+ ..+.+.       ++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   99 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   99 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999988776432 21    2233432 22  2444432 222221       57


Q ss_pred             ccEEEECCCChh----------h---------------HHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHH
Q 021831          238 FDAVLDTIGAPE----------T---------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       238 ~dvvid~~g~~~----------~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      +|++|++.|...          .               ...++..|+  ..|++|.++.............++....+..
T Consensus       100 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  179 (273)
T 1ae1_A          100 LNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAIN  179 (273)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHHHHHHH
Confidence            999999988420          1               122333332  3689999987654333222233333444444


Q ss_pred             HHHHHHh-hhhcccccc
Q 021831          291 LLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~-~~~~~~i~~  306 (307)
                      .+-+.+. .+..+||++
T Consensus       180 ~~~~~la~e~~~~gi~v  196 (273)
T 1ae1_A          180 QMTKSLACEWAKDNIRV  196 (273)
T ss_dssp             HHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHhhcCcEE
Confidence            4433333 445567764

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=97.75  E-value=0.00075  Score=61.26  Aligned_cols=78  Identities=22%  Similarity=0.286  Sum_probs=50.1

Q ss_pred             cCC-CCCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEeCCc-c----------------HHHHHHcCCce-EE--eCCC
Q 021831          170 ARM-SEGQRLLVLGGGGAVGFAAVQFSVA-SGCHVSATCGSK-S----------------IDRVLAAGAEQ-AV--DYSS  227 (307)
Q Consensus       170 ~~~-~~g~~VlI~Ga~g~~G~~~~~~a~~-~G~~Vi~~~~~~-~----------------~~~~~~~g~~~-v~--~~~~  227 (307)
                      ..+ ..++++||+||++++|++.+..+.. .|++|+.+.+.+ .                .+.+++.|... .+  |..+
T Consensus        41 ~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd  120 (405)
T 3zu3_A           41 GPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFS  120 (405)
T ss_dssp             CCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTS
T ss_pred             CCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCC
Confidence            344 5678889999999999998887777 899998875432 1                11234455432 22  3333


Q ss_pred             hh-HH---HHhc---CCccEEEECCCC
Q 021831          228 KD-IE---LAIK---GKFDAVLDTIGA  247 (307)
Q Consensus       228 ~~-~~---~~~~---~~~dvvid~~g~  247 (307)
                      .+ ..   +.+.   +++|+++++.|.
T Consensus       121 ~~~v~~~v~~i~~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          121 DEIKQLTIDAIKQDLGQVDQVIYSLAS  147 (405)
T ss_dssp             HHHHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEcCcc
Confidence            32 22   2221   689999999774

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.74  E-value=0.00039  Score=59.30  Aligned_cols=132  Identities=21%  Similarity=0.281  Sum_probs=75.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eEE--eCCChh-HHHHhc------CCcc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QAV--DYSSKD-IELAIK------GKFD  239 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v~--~~~~~~-~~~~~~------~~~d  239 (307)
                      +.++||+||+|++|.+.++.+...|++|+.+.++.+. +.    ++..+.. ..+  |.++.+ +.+.+.      +++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            5689999999999999999999999999988776432 21    2223432 222  444432 222222      5799


Q ss_pred             EEEECCCCh----------h---------------hHHHHHhcccC---CcEEEEeccCcccccccccceechhHHHHHH
Q 021831          240 AVLDTIGAP----------E---------------TERLGLNFLKR---GGHYMTLHGETAALADHYGLALGLPIATTVL  291 (307)
Q Consensus       240 vvid~~g~~----------~---------------~~~~~~~~l~~---~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  291 (307)
                      ++|++.|..          +               ....++..+..   .|++|.++.............++........
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  161 (256)
T 1geg_A           82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG  161 (256)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHHH
Confidence            999998731          0               11234444432   6899998875443222222223333333333


Q ss_pred             HHHHH-hhhhcccccc
Q 021831          292 LKKRM-QTWYSYGIGC  306 (307)
Q Consensus       292 ~~~~~-~~~~~~~i~~  306 (307)
                      +-+.+ ..+.++||++
T Consensus       162 ~~~~la~e~~~~gi~v  177 (256)
T 1geg_A          162 LTQTAARDLAPLGITV  177 (256)
T ss_dssp             HHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHHcCeEE
Confidence            33333 3445567764

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.74  E-value=0.00028  Score=60.20  Aligned_cols=131  Identities=14%  Similarity=0.055  Sum_probs=75.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH---HHHcCCce-EEeCCC-hhHHHHhc---CCccEEEECCC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR---VLAAGAEQ-AVDYSS-KDIELAIK---GKFDAVLDTIG  246 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~---~~~~g~~~-v~~~~~-~~~~~~~~---~~~dvvid~~g  246 (307)
                      .++||+||+|++|.+.++.+...|++|+.+.++.+ .+.   ++..+.+. .++... ..+.+.+.   +++|++|++.|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~nAg   81 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI   81 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            36899999999999999999999999998876543 222   22334332 222222 12222222   68999999987


Q ss_pred             Ch-h-------------------------hHHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHHHHHHHh-
Q 021831          247 AP-E-------------------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ-  297 (307)
Q Consensus       247 ~~-~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  297 (307)
                      .. .                         ....++..|+  ..|++|.++.............++........+-+.+. 
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~  161 (254)
T 1zmt_A           82 FAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSK  161 (254)
T ss_dssp             CCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHHHHHHHHH
Confidence            43 0                         1123344442  36899999876553332222233334444444444333 


Q ss_pred             hhhcccccc
Q 021831          298 TWYSYGIGC  306 (307)
Q Consensus       298 ~~~~~~i~~  306 (307)
                      .+..+||++
T Consensus       162 e~~~~gi~v  170 (254)
T 1zmt_A          162 ELGEYNIPV  170 (254)
T ss_dssp             HHGGGTCCE
T ss_pred             HhhhcCcEE
Confidence            445567765

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.74  E-value=0.00026  Score=60.71  Aligned_cols=133  Identities=17%  Similarity=0.258  Sum_probs=76.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-H---HHcCCc-eE--EeCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-V---LAAGAE-QA--VDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~---~~~g~~-~v--~~~~~~~-~~~~~~------~~~  238 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.++.+ .+. .   ++.+.. ..  .|.++.+ ..+.+.      +++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   85 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   85 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            4789999999999999999999999999998876543 222 2   222432 22  2444432 222111      589


Q ss_pred             cEEEECCCCh-----------h---------------hHHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHH
Q 021831          239 DAVLDTIGAP-----------E---------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       239 dvvid~~g~~-----------~---------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      |++|++.|..           .               ....++..+.  ..|++|.++.............++.......
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  165 (262)
T 1zem_A           86 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAII  165 (262)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHHHHHH
Confidence            9999998732           0               0123333442  3589999887543222222223333333333


Q ss_pred             HHHHHH-hhhhcccccc
Q 021831          291 LLKKRM-QTWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~-~~~~~~~i~~  306 (307)
                      .+-+.+ ..+..+||++
T Consensus       166 ~~~~~la~e~~~~gi~v  182 (262)
T 1zem_A          166 ALTETAALDLAPYNIRV  182 (262)
T ss_dssp             HHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHHhhCeEE
Confidence            333333 3445667765

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.74  E-value=0.00049  Score=59.02  Aligned_cols=133  Identities=15%  Similarity=0.233  Sum_probs=75.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHc-----CC-ceEE--eCCChh-HHHHhc------C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAA-----GA-EQAV--DYSSKD-IELAIK------G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~-----g~-~~v~--~~~~~~-~~~~~~------~  236 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.++.+. .. ..++     +. ...+  |.++.+ +.+.+.      +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   85 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999988776432 21 2222     11 1222  444432 222221      5


Q ss_pred             CccEEEECCCCh--h---------------hHHHHHhcccC-----CcEEEEeccCcccccccccceechhHHHHHHHHH
Q 021831          237 KFDAVLDTIGAP--E---------------TERLGLNFLKR-----GGHYMTLHGETAALADHYGLALGLPIATTVLLKK  294 (307)
Q Consensus       237 ~~dvvid~~g~~--~---------------~~~~~~~~l~~-----~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (307)
                      ++|++|++.|..  .               ....++..++.     +|++|.++.............++....+...+-+
T Consensus        86 ~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  165 (267)
T 2gdz_A           86 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTR  165 (267)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHHHHHHHHHHHH
Confidence            789999999842  1               11234444532     6899999876543222222223333333333333


Q ss_pred             HH---hhhhcccccc
Q 021831          295 RM---QTWYSYGIGC  306 (307)
Q Consensus       295 ~~---~~~~~~~i~~  306 (307)
                      .+   ..+..+||++
T Consensus       166 ~~ala~e~~~~gi~v  180 (267)
T 2gdz_A          166 SAALAANLMNSGVRL  180 (267)
T ss_dssp             HHHHHHHHHTCCEEE
T ss_pred             HHHHHHHhccCCcEE
Confidence            21   2334566664

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.73  E-value=0.00042  Score=61.30  Aligned_cols=133  Identities=21%  Similarity=0.321  Sum_probs=77.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCC---ceE--EeCCChh-HHHHhc------C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGA---EQA--VDYSSKD-IELAIK------G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~---~~v--~~~~~~~-~~~~~~------~  236 (307)
                      .|.++||+||+|++|..+++.+...|++|+.+.++... +.    +...+.   ..+  .|.++.+ +.+.+.      +
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG   86 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999999998776532 21    222332   122  2444432 222221      5


Q ss_pred             CccEEEECCCCh----------hh---------------HHHHHhccc--------CCcEEEEeccCcccccccccceec
Q 021831          237 KFDAVLDTIGAP----------ET---------------ERLGLNFLK--------RGGHYMTLHGETAALADHYGLALG  283 (307)
Q Consensus       237 ~~dvvid~~g~~----------~~---------------~~~~~~~l~--------~~G~~v~~g~~~~~~~~~~~~~~~  283 (307)
                      ++|++|++.|..          ..               ...++..+.        .+|++|.++.............++
T Consensus        87 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~~~Y~  166 (319)
T 3ioy_A           87 PVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYN  166 (319)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSSHHHH
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCCHHHH
Confidence            799999999831          11               123333442        379999998765533332222333


Q ss_pred             hhHHHHHHHHHHHh-hhhcccccc
Q 021831          284 LPIATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       284 ~~~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ....+...+-..+. .+..+||++
T Consensus       167 aSKaal~~~~~~la~e~~~~gi~v  190 (319)
T 3ioy_A          167 TTKFAVRGLSESLHYSLLKYEIGV  190 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCEE
Confidence            33333333333333 344556664

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=97.73  E-value=0.00036  Score=60.17  Aligned_cols=133  Identities=23%  Similarity=0.337  Sum_probs=78.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-c-HHH----HHHcCCc-eEE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-S-IDR----VLAAGAE-QAV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~-~~~----~~~~g~~-~v~--~~~~~~-~~~~~~------~~  237 (307)
                      .|.++||+||++++|.++++.+...|++|+.+.+.. . .+.    +++.+.. ..+  |.++.+ ..+.+.      ++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~  106 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGR  106 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999998876632 2 111    2333432 222  444432 222121      58


Q ss_pred             ccEEEECCCCh----------hh---------------HHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHH
Q 021831          238 FDAVLDTIGAP----------ET---------------ERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       238 ~dvvid~~g~~----------~~---------------~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      +|++|++.|..          +.               ...++..+  +..|++|.++.............++....+..
T Consensus       107 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  186 (269)
T 4dmm_A          107 LDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVI  186 (269)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHHHHHHH
Confidence            99999998742          01               12333334  35789999987654333333333444444444


Q ss_pred             HHHHHHh-hhhcccccc
Q 021831          291 LLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~-~~~~~~i~~  306 (307)
                      .+-+.+. .+..+||++
T Consensus       187 ~l~~~la~e~~~~gi~v  203 (269)
T 4dmm_A          187 GLTKTVAKELASRGITV  203 (269)
T ss_dssp             HHHHHHHHHHGGGTCEE
T ss_pred             HHHHHHHHHHhhhCcEE
Confidence            4444433 455667765

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.73  E-value=0.00076  Score=57.99  Aligned_cols=133  Identities=23%  Similarity=0.354  Sum_probs=76.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-H----HHcCCc-eE--EeCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-V----LAAGAE-QA--VDYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~----~~~g~~-~v--~~~~~~~-~~~~~~------~~  237 (307)
                      .+.++||+||+|++|.++++.+...|++|+.+.++.+. +. .    +..+.. ..  .|.++.+ +.+.+.      ++
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   99 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999988776432 21 2    222433 22  2444432 222221      57


Q ss_pred             ccEEEECCCChh----------h---------------HHHHHhccc--CCcEEEEeccCc-ccccccccceechhHHHH
Q 021831          238 FDAVLDTIGAPE----------T---------------ERLGLNFLK--RGGHYMTLHGET-AALADHYGLALGLPIATT  289 (307)
Q Consensus       238 ~dvvid~~g~~~----------~---------------~~~~~~~l~--~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~  289 (307)
                      +|++|++.|...          .               ...++..|+  ..|++|.++... ..........++......
T Consensus       100 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~  179 (267)
T 1vl8_A          100 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGV  179 (267)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHHH
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhHHHHHHHH
Confidence            999999988420          0               122344443  358999998755 322222222233333333


Q ss_pred             HHHHHHH-hhhhcccccc
Q 021831          290 VLLKKRM-QTWYSYGIGC  306 (307)
Q Consensus       290 ~~~~~~~-~~~~~~~i~~  306 (307)
                      ..+-+.+ ..+..+||++
T Consensus       180 ~~~~~~la~e~~~~gi~v  197 (267)
T 1vl8_A          180 ASLTKALAKEWGRYGIRV  197 (267)
T ss_dssp             HHHHHHHHHHHGGGTCEE
T ss_pred             HHHHHHHHHHhcccCeEE
Confidence            3333333 3445567764

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.73  E-value=0.00052  Score=58.61  Aligned_cols=132  Identities=16%  Similarity=0.135  Sum_probs=75.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH---HH-HHH---cCCc-eE--EeCCChh-HHHHhc------CC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DR-VLA---AGAE-QA--VDYSSKD-IELAIK------GK  237 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~---~~-~~~---~g~~-~v--~~~~~~~-~~~~~~------~~  237 (307)
                      +.++||+||+|++|.+.++.+...|++|+.+.++.+.   +. .++   .+.. ..  .|.++.+ +.+.+.      ++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999888889999988765443   21 222   2322 22  2444432 222221      58


Q ss_pred             ccEEEECCCCh----------h---------------hHHHHHhccc--CC-cEEEEeccCcccccccccceechhHHHH
Q 021831          238 FDAVLDTIGAP----------E---------------TERLGLNFLK--RG-GHYMTLHGETAALADHYGLALGLPIATT  289 (307)
Q Consensus       238 ~dvvid~~g~~----------~---------------~~~~~~~~l~--~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~  289 (307)
                      +|++|++.|..          +               ....++..|+  .. |++|.++.............++......
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  161 (258)
T 3a28_C           82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAV  161 (258)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHHH
Confidence            99999998841          0               1123344442  33 8999998765432222222333333444


Q ss_pred             HHHHHHHh-hhhcccccc
Q 021831          290 VLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       290 ~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+-+.+. .+..+||++
T Consensus       162 ~~~~~~la~e~~~~gi~v  179 (258)
T 3a28_C          162 RGLTQAAAQELAPKGHTV  179 (258)
T ss_dssp             HHHHHHHHHHHGGGTCEE
T ss_pred             HHHHHHHHHHHHhhCeEE
Confidence            33333333 445567765

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.73  E-value=0.00071  Score=56.68  Aligned_cols=98  Identities=16%  Similarity=0.255  Sum_probs=62.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHcCCceEE--eCCChh-HHHHhc------CCccEEEE
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAAGAEQAV--DYSSKD-IELAIK------GKFDAVLD  243 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~g~~~v~--~~~~~~-~~~~~~------~~~dvvid  243 (307)
                      +.++||+||+|.+|...++.+...|++|+.+.++.. .+. ..++.....+  |..+.+ +.+.+.      +++|++|+
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVN   84 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            568999999999999999999999999998877543 222 3334322333  333332 222221      57999999


Q ss_pred             CCCChh----------h---------------HHHHHhccc--CCcEEEEeccCcc
Q 021831          244 TIGAPE----------T---------------ERLGLNFLK--RGGHYMTLHGETA  272 (307)
Q Consensus       244 ~~g~~~----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  272 (307)
                      +.|...          .               ...++..++  ..|++|.++....
T Consensus        85 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  140 (234)
T 2ehd_A           85 NAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAG  140 (234)
T ss_dssp             CCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTT
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchh
Confidence            988310          0               124444443  3589999987654

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.72  E-value=0.00046  Score=60.97  Aligned_cols=133  Identities=14%  Similarity=0.136  Sum_probs=78.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-------------cHH----HHHHcCCce-E--EeCCChh-HHH
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-------------SID----RVLAAGAEQ-A--VDYSSKD-IEL  232 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-------------~~~----~~~~~g~~~-v--~~~~~~~-~~~  232 (307)
                      .|.++||+||++++|.++++.+...|++|+.+.+..             +.+    .+++.+... .  .|.++.+ ..+
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  124 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA  124 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            578999999999999999999999999998885431             111    123344332 2  2444432 222


Q ss_pred             Hhc------CCccEEEECCCCh----------hh---------------HHHHHhccc---CCcEEEEeccCcccccccc
Q 021831          233 AIK------GKFDAVLDTIGAP----------ET---------------ERLGLNFLK---RGGHYMTLHGETAALADHY  278 (307)
Q Consensus       233 ~~~------~~~dvvid~~g~~----------~~---------------~~~~~~~l~---~~G~~v~~g~~~~~~~~~~  278 (307)
                      .+.      +++|++|++.|..          +.               ...++..|.   .+|++|.++..........
T Consensus       125 ~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~  204 (317)
T 3oec_A          125 VVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPG  204 (317)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCTT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCCC
Confidence            221      6899999998841          01               123344442   3689999987655433333


Q ss_pred             cceechhHHHHHHHHHHHh-hhhcccccc
Q 021831          279 GLALGLPIATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ...++....+...+-+.+. .+..+||++
T Consensus       205 ~~~Y~asKaa~~~l~~~la~e~~~~gI~v  233 (317)
T 3oec_A          205 QSHYAASKHGVQGLMLSLANEVGRHNIRV  233 (317)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhcCeEE
Confidence            3334444444444444443 455667775

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=97.72  E-value=0.00041  Score=60.18  Aligned_cols=133  Identities=19%  Similarity=0.176  Sum_probs=79.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-----------------cHHH----HHHcCCc-eE--EeCCChh
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-----------------SIDR----VLAAGAE-QA--VDYSSKD  229 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-----------------~~~~----~~~~g~~-~v--~~~~~~~  229 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.+++                 +.+.    ++..+.. ..  .|.++.+
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   89 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD   89 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence            578999999999999999999999999999886541                 1111    1222332 22  2444432


Q ss_pred             -HHHHhc------CCccEEEECCCCh-----------hh---------------HHHHHhccc---CCcEEEEeccCccc
Q 021831          230 -IELAIK------GKFDAVLDTIGAP-----------ET---------------ERLGLNFLK---RGGHYMTLHGETAA  273 (307)
Q Consensus       230 -~~~~~~------~~~dvvid~~g~~-----------~~---------------~~~~~~~l~---~~G~~v~~g~~~~~  273 (307)
                       ..+.+.      +++|++|++.|..           +.               ...++..|.   .+|++|.++.....
T Consensus        90 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  169 (286)
T 3uve_A           90 ALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGL  169 (286)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhc
Confidence             222221      6899999998841           01               123334442   36899999876654


Q ss_pred             ccccccceechhHHHHHHHHHHHh-hhhcccccc
Q 021831          274 LADHYGLALGLPIATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ........++....+...+-+.+. .+.++||++
T Consensus       170 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~v  203 (286)
T 3uve_A          170 KAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRV  203 (286)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             cCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEE
Confidence            433333344444455554444443 455667775

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=97.72  E-value=0.00065  Score=58.06  Aligned_cols=133  Identities=24%  Similarity=0.359  Sum_probs=75.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eE--EeCCChh-HHHHhc-------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QA--VDYSSKD-IELAIK-------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v--~~~~~~~-~~~~~~-------~~  237 (307)
                      .|.++||+||+|++|.+.++.+...|++|+.+.++.+. +.    +++.+.. ..  .|.++.+ ..+.+.       ++
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   87 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   87 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999998999999988776432 21    2223432 12  2444432 222221       57


Q ss_pred             ccEEEECCCCh----------hh---------------HHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHH
Q 021831          238 FDAVLDTIGAP----------ET---------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       238 ~dvvid~~g~~----------~~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      +|++|++.|..          +.               ...++..|+  ..|++|.++.............++.......
T Consensus        88 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  167 (260)
T 2ae2_A           88 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMD  167 (260)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHHHHHH
Confidence            99999998831          01               122333332  3589999987654322222222333333333


Q ss_pred             HHHHHHh-hhhcccccc
Q 021831          291 LLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~-~~~~~~i~~  306 (307)
                      .+-+.+. .+..+||++
T Consensus       168 ~~~~~la~e~~~~gi~v  184 (260)
T 2ae2_A          168 QLTRCLAFEWAKDNIRV  184 (260)
T ss_dssp             HHHHHHHHHTGGGTEEE
T ss_pred             HHHHHHHHHHhhcCcEE
Confidence            3333333 444557664

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.71  E-value=0.0007  Score=59.17  Aligned_cols=133  Identities=18%  Similarity=0.177  Sum_probs=77.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHc---C--CceEE--eCCChh-HHH---Hhc---CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAA---G--AEQAV--DYSSKD-IEL---AIK---GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~---g--~~~v~--~~~~~~-~~~---~~~---~~  237 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.++.+ .+. ..++   +  ....+  |.++.+ ..+   .+.   ++
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  119 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA  119 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999999876643 222 2332   2  11222  344432 222   121   68


Q ss_pred             ccEEEECCCCh----------hh---------------HHHHHhccc--CCcEEEEeccCccc-ccccccceechhHHHH
Q 021831          238 FDAVLDTIGAP----------ET---------------ERLGLNFLK--RGGHYMTLHGETAA-LADHYGLALGLPIATT  289 (307)
Q Consensus       238 ~dvvid~~g~~----------~~---------------~~~~~~~l~--~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~  289 (307)
                      +|++|++.|..          +.               ...++..|+  ..|++|.++..... ........++....+.
T Consensus       120 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asKaa~  199 (293)
T 3rih_A          120 LDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQ  199 (293)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHHHHHHHH
Confidence            99999998841          00               122222332  46899999876543 2222223334444444


Q ss_pred             HHHHHHHh-hhhcccccc
Q 021831          290 VLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       290 ~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+-+.+. .+..+||++
T Consensus       200 ~~l~~~la~e~~~~gI~v  217 (293)
T 3rih_A          200 LGFMRTAAIELAPRGVTV  217 (293)
T ss_dssp             HHHHHHHHHHHGGGTCEE
T ss_pred             HHHHHHHHHHHhhhCeEE
Confidence            44444433 455667775

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=97.70  E-value=0.00046  Score=58.37  Aligned_cols=133  Identities=17%  Similarity=0.234  Sum_probs=77.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eE--EeCCChh-HHH---Hhc---CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QA--VDYSSKD-IEL---AIK---GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v--~~~~~~~-~~~---~~~---~~~  238 (307)
                      .+.++||+||++++|...++.+...|++|+.+.++.+. +.    +++.+.. ..  .|..+.+ ..+   .+.   +++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999998999999998776432 21    2333433 22  2333332 222   221   579


Q ss_pred             cEEEECCCCh----------hh---------------HHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHHH
Q 021831          239 DAVLDTIGAP----------ET---------------ERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTVL  291 (307)
Q Consensus       239 dvvid~~g~~----------~~---------------~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  291 (307)
                      |++|++.|..          +.               ...++..+  +..|++|.++.............++....+...
T Consensus        84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  163 (247)
T 3lyl_A           84 DILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIG  163 (247)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHHHHHH
Confidence            9999998842          00               12233333  356899999876543333223333333333333


Q ss_pred             HHHHHh-hhhcccccc
Q 021831          292 LKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       292 ~~~~~~-~~~~~~i~~  306 (307)
                      +-+.+. .+..+||++
T Consensus       164 ~~~~la~e~~~~gi~v  179 (247)
T 3lyl_A          164 FSKSLAYEVASRNITV  179 (247)
T ss_dssp             HHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHHcCeEE
Confidence            444333 444567764

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.70  E-value=0.00063  Score=58.19  Aligned_cols=74  Identities=23%  Similarity=0.343  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHcCC-ceE--EeCCChh-HHHHhc------CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGA-EQA--VDYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~g~-~~v--~~~~~~~-~~~~~~------~~~dvv  241 (307)
                      .+.++||+||+|++|...++.+...|++|+.+.++.+. +. ..++.. ...  .|.++.+ +.+.+.      +++|++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l   90 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL   90 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47899999999999999999999999999988776432 22 233321 122  2444432 222222      589999


Q ss_pred             EECCCC
Q 021831          242 LDTIGA  247 (307)
Q Consensus       242 id~~g~  247 (307)
                      |++.|.
T Consensus        91 v~~Ag~   96 (263)
T 3ak4_A           91 CANAGV   96 (263)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999883

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.70  E-value=0.00028  Score=60.67  Aligned_cols=99  Identities=24%  Similarity=0.354  Sum_probs=64.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHcCCc-eE--EeCCChh-HHHHhc------CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGAE-QA--VDYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~g~~-~v--~~~~~~~-~~~~~~------~~~dvv  241 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.++.+. +. .++++.. ..  .|.++.+ ..+.+.      +++|++
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   84 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   84 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            46899999999999999999999999999998776432 22 3334322 22  2444432 222221      578999


Q ss_pred             EECCCChh-------------------------hHHHHHhcccCCcEEEEeccCcc
Q 021831          242 LDTIGAPE-------------------------TERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       242 id~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      |++.|...                         ....++..++.+|++|.++....
T Consensus        85 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  140 (263)
T 2a4k_A           85 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG  140 (263)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchh
Confidence            99987310                         01233444534799999987654

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.70  E-value=0.00043  Score=58.95  Aligned_cols=133  Identities=20%  Similarity=0.274  Sum_probs=76.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHcCCc-eEE--eCCChh-HHHHhc------CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAAGAE-QAV--DYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~g~~-~v~--~~~~~~-~~~~~~------~~~dvv  241 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.++.+ .+. .++++.. ..+  |.++.+ +.+.+.      +++|++
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   84 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4689999999999999999999999999998876543 222 3344432 222  333332 222221      578999


Q ss_pred             EECCCChh-------------------------hHHHHHhccc-CCcEEEEeccCcccccccccceechhHHHHHHHHHH
Q 021831          242 LDTIGAPE-------------------------TERLGLNFLK-RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKR  295 (307)
Q Consensus       242 id~~g~~~-------------------------~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (307)
                      |++.|...                         ....++..++ .+|++|.++.............++........+-+.
T Consensus        85 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~  164 (253)
T 1hxh_A           85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRA  164 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCCCCCCccHHHHHHHHHHHHHH
Confidence            99988420                         1123444443 358999998765433222222333333333333333


Q ss_pred             Hh-hhhcc--cccc
Q 021831          296 MQ-TWYSY--GIGC  306 (307)
Q Consensus       296 ~~-~~~~~--~i~~  306 (307)
                      +. .+.++  ||++
T Consensus       165 la~e~~~~~~gi~v  178 (253)
T 1hxh_A          165 AALSCRKQGYAIRV  178 (253)
T ss_dssp             HHHHHHHHTCCEEE
T ss_pred             HHHHhhhcCCCeEE
Confidence            32 33344  6654

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=97.70  E-value=0.00053  Score=62.76  Aligned_cols=79  Identities=20%  Similarity=0.211  Sum_probs=51.4

Q ss_pred             HcCC-CCCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEeCCcc-H----------------HHHHHcCCce-EE--eCC
Q 021831          169 AARM-SEGQRLLVLGGGGAVGFAAVQFSVA-SGCHVSATCGSKS-I----------------DRVLAAGAEQ-AV--DYS  226 (307)
Q Consensus       169 ~~~~-~~g~~VlI~Ga~g~~G~~~~~~a~~-~G~~Vi~~~~~~~-~----------------~~~~~~g~~~-v~--~~~  226 (307)
                      ...+ +.++++||+||++++|++.+..+.. .|++|+.+.+.+. .                +.+++.|... .+  |..
T Consensus        54 ~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvt  133 (422)
T 3s8m_A           54 RGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAF  133 (422)
T ss_dssp             TCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             ccccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCC
Confidence            3455 4678899999999999998887777 9999988854321 0                2345556432 22  333


Q ss_pred             Chh-H---HHHh---c-CCccEEEECCCC
Q 021831          227 SKD-I---ELAI---K-GKFDAVLDTIGA  247 (307)
Q Consensus       227 ~~~-~---~~~~---~-~~~dvvid~~g~  247 (307)
                      +.+ .   .+.+   . +++|+++++.|.
T Consensus       134 d~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          134 SDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             SHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            332 1   2222   1 578999998864

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=97.69  E-value=0.0003  Score=61.02  Aligned_cols=133  Identities=20%  Similarity=0.203  Sum_probs=77.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHc---CCceE---EeCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAA---GAEQA---VDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~---g~~~v---~~~~~~~-~~~~~~------~~~  238 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.++.+. +. ..++   +....   .|.++.+ ..+.+.      +++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL   86 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999988766432 22 2232   32211   2333332 222221      589


Q ss_pred             cEEEECCCCh-----------hh---------------HHHHHhccc--CCcEEEEeccCccc-ccccccceechhHHHH
Q 021831          239 DAVLDTIGAP-----------ET---------------ERLGLNFLK--RGGHYMTLHGETAA-LADHYGLALGLPIATT  289 (307)
Q Consensus       239 dvvid~~g~~-----------~~---------------~~~~~~~l~--~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~  289 (307)
                      |++|++.|..           +.               ...++..+.  .+|++|.++..... ........++....+.
T Consensus        87 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~  166 (280)
T 3tox_A           87 DTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGL  166 (280)
T ss_dssp             CEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHHHHHH
Confidence            9999998832           00               123334443  36899999876543 2222222334444444


Q ss_pred             HHHHHHHh-hhhcccccc
Q 021831          290 VLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       290 ~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+-+.+. .+..+||++
T Consensus       167 ~~l~~~la~e~~~~gIrv  184 (280)
T 3tox_A          167 IGLVQALAVELGARGIRV  184 (280)
T ss_dssp             HHHHHHHHHHHHTTTEEE
T ss_pred             HHHHHHHHHHhhhcCeEE
Confidence            44444443 445667765

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=97.69  E-value=0.00056  Score=58.39  Aligned_cols=133  Identities=15%  Similarity=0.166  Sum_probs=75.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eE--EeCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QA--VDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v--~~~~~~~-~~~~~~------~~~  238 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.++.+. +.    +++.+.. ..  .|..+.+ ..+.+.      +++
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   92 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV   92 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999998776432 21    2233432 12  2333332 222221      589


Q ss_pred             cEEEECCCChh-----------h---------------HHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHH
Q 021831          239 DAVLDTIGAPE-----------T---------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       239 dvvid~~g~~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      |++|++.|...           .               ...++..|+  ..|++|.++.............++.......
T Consensus        93 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  172 (260)
T 2zat_A           93 DILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALL  172 (260)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHHHHHH
Confidence            99999987410           0               123333342  4589999987654322222222333333333


Q ss_pred             HHHHHH-hhhhcccccc
Q 021831          291 LLKKRM-QTWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~-~~~~~~~i~~  306 (307)
                      .+-+.+ ..+..+||++
T Consensus       173 ~~~~~la~e~~~~gi~v  189 (260)
T 2zat_A          173 GLTKNLAVELAPRNIRV  189 (260)
T ss_dssp             HHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHhcccCeEE
Confidence            333333 3444567764

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=97.69  E-value=0.00038  Score=60.28  Aligned_cols=134  Identities=19%  Similarity=0.220  Sum_probs=77.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eE--EeCCChh-HHHHhc------CC
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QA--VDYSSKD-IELAIK------GK  237 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v--~~~~~~~-~~~~~~------~~  237 (307)
                      ..+.++||+||++++|.++++.+...|++|+.+.++.+. +.    +++.+.. ..  .|.++.+ ..+.+.      ++
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            357899999999999999999988999999988776432 21    2233432 12  2444432 222121      68


Q ss_pred             ccEEEECCCChh----------h---------------HHHHHh--cc--cCCcEEEEeccCcccccccccceechhHHH
Q 021831          238 FDAVLDTIGAPE----------T---------------ERLGLN--FL--KRGGHYMTLHGETAALADHYGLALGLPIAT  288 (307)
Q Consensus       238 ~dvvid~~g~~~----------~---------------~~~~~~--~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  288 (307)
                      +|++|++.|...          .               ...++.  .+  +..|++|.++.............++....+
T Consensus       102 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa  181 (279)
T 3sju_A          102 IGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHG  181 (279)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHHHH
Confidence            999999988420          0               122222  12  245899999876554333333334444444


Q ss_pred             HHHHHHHHh-hhhcccccc
Q 021831          289 TVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       289 ~~~~~~~~~-~~~~~~i~~  306 (307)
                      ...+-+.+. .+.++||++
T Consensus       182 ~~~l~~~la~e~~~~gi~v  200 (279)
T 3sju_A          182 VVGFTKSVGFELAKTGITV  200 (279)
T ss_dssp             HHHHHHHHHHHTGGGTEEE
T ss_pred             HHHHHHHHHHHHHhhCcEE
Confidence            444444443 445567765

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=97.68  E-value=0.00011  Score=63.47  Aligned_cols=130  Identities=22%  Similarity=0.203  Sum_probs=76.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHH----HHhc---CCccEEEECCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIE----LAIK---GKFDAVLDTIG  246 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~----~~~~---~~~dvvid~~g  246 (307)
                      .|.++||+||++++|.++++.+...|++|+.+.+......  +. .....|..+.+..    +.+.   +++|++|++.|
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~--~~-~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg  103 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA--AD-LHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAG  103 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC--CS-EECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--hh-hccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            4789999999999999999999999999998876533110  00 0011233332211    1111   68999999988


Q ss_pred             Chh----------h---------------HHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHHHHHHHh-h
Q 021831          247 APE----------T---------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ-T  298 (307)
Q Consensus       247 ~~~----------~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  298 (307)
                      ...          .               ...++..|+  .+|++|.++.............++....+...+-+.+. .
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e  183 (266)
T 3uxy_A          104 VISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMD  183 (266)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHHHHHHHHHHHHHHH
Confidence            421          1               123334443  47999999877654433333334444444444444443 4


Q ss_pred             hhcccccc
Q 021831          299 WYSYGIGC  306 (307)
Q Consensus       299 ~~~~~i~~  306 (307)
                      +..+||++
T Consensus       184 ~~~~gI~v  191 (266)
T 3uxy_A          184 HAPQGIRI  191 (266)
T ss_dssp             HGGGTEEE
T ss_pred             hhhcCcEE
Confidence            45567765

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=97.68  E-value=0.00035  Score=59.84  Aligned_cols=133  Identities=17%  Similarity=0.128  Sum_probs=76.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHcCCc-eE--EeCCChh-HHHHhc------CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGAE-QA--VDYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~g~~-~v--~~~~~~~-~~~~~~------~~~dvv  241 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.+..+. +. ..++... ..  .|.++.+ ..+.+.      +++|++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   85 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            47899999999999999999998899999988776432 22 2333221 22  2444432 222222      589999


Q ss_pred             EECCCCh----------hhH---------------HHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHHHHH
Q 021831          242 LDTIGAP----------ETE---------------RLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLLKK  294 (307)
Q Consensus       242 id~~g~~----------~~~---------------~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (307)
                      |++.|..          ..+               ..++..++  ..|++|.++.............++........+-+
T Consensus        86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  165 (260)
T 1nff_A           86 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTK  165 (260)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHHHHHHHHH
Confidence            9998831          011               23444443  36899999876543222222223333333333333


Q ss_pred             HH-hhhhcccccc
Q 021831          295 RM-QTWYSYGIGC  306 (307)
Q Consensus       295 ~~-~~~~~~~i~~  306 (307)
                      .+ ..+..+||++
T Consensus       166 ~la~e~~~~gi~v  178 (260)
T 1nff_A          166 STALELGPSGIRV  178 (260)
T ss_dssp             HHHHHHGGGTEEE
T ss_pred             HHHHHhCccCcEE
Confidence            33 3444567764

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=97.68  E-value=0.00061  Score=58.28  Aligned_cols=133  Identities=16%  Similarity=0.242  Sum_probs=76.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHc----CCc-eE--EeCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAA----GAE-QA--VDYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~----g~~-~v--~~~~~~~-~~~~~~------~~  237 (307)
                      .+.++||+||+|++|...++.+...|++|+.+.++.+. +. ..++    +.. ..  .|.++.+ +.+.+.      ++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG   85 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46889999999999999999999999999988776432 21 1221    432 22  2444432 222221      57


Q ss_pred             ccEEEECCCCh----------hh---------------HHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHH
Q 021831          238 FDAVLDTIGAP----------ET---------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       238 ~dvvid~~g~~----------~~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      +|++|++.|..          ..               ...++..++  ..|++|.++.............++.......
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  165 (263)
T 3ai3_A           86 ADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALM  165 (263)
T ss_dssp             CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHHHHHHH
Confidence            99999998741          00               123333332  3589999987654332222222333333333


Q ss_pred             HHHHHHh-hhhcccccc
Q 021831          291 LLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~-~~~~~~i~~  306 (307)
                      .+-+.+. .+.++||++
T Consensus       166 ~~~~~la~e~~~~gi~v  182 (263)
T 3ai3_A          166 MFSKTLATEVIKDNIRV  182 (263)
T ss_dssp             HHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHhhhcCcEE
Confidence            3333333 444567764

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.68  E-value=0.00055  Score=50.56  Aligned_cols=95  Identities=20%  Similarity=0.203  Sum_probs=63.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCcc-HHHHHHcCCce-EEeCCChhHHHHhcCCccEEEECCCChhh
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKS-IDRVLAAGAEQ-AVDYSSKDIELAIKGKFDAVLDTIGAPET  250 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~~~-~~~~~~~g~~~-v~~~~~~~~~~~~~~~~dvvid~~g~~~~  250 (307)
                      .+.+|+|+|+ |.+|..+++.+...| .+|+++.++.+ .+.+...+... ..+..+.+.......++|+||++++....
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~~   82 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFLT   82 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGGH
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchhh
Confidence            4578999998 999999999999999 68888876543 33344445432 22333333222233579999999987644


Q ss_pred             HHHHHhcccCCcEEEEecc
Q 021831          251 ERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~  269 (307)
                      ...+..+.+.+-.++.+..
T Consensus        83 ~~~~~~~~~~g~~~~~~~~  101 (118)
T 3ic5_A           83 PIIAKAAKAAGAHYFDLTE  101 (118)
T ss_dssp             HHHHHHHHHTTCEEECCCS
T ss_pred             HHHHHHHHHhCCCEEEecC
Confidence            4445555566767766554

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.68  E-value=0.00028  Score=59.42  Aligned_cols=128  Identities=19%  Similarity=0.191  Sum_probs=75.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEE--eCCCh-hHHHHhc--------CCccEEEE
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAV--DYSSK-DIELAIK--------GKFDAVLD  243 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~--~~~~~-~~~~~~~--------~~~dvvid  243 (307)
                      +.++||+||+|++|.+.++.+...|++|+.+.++.....    +....+  |..+. +..+.+.        +++|++|+
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~   78 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFC   78 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence            578999999999999999999999999999877643211    111111  22222 1222221        47999999


Q ss_pred             CCCCh--------hh------------------HHHHHhcccCCcEEEEeccCcccccccccceechhHHHHHHHHHHHh
Q 021831          244 TIGAP--------ET------------------ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ  297 (307)
Q Consensus       244 ~~g~~--------~~------------------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (307)
                      +.|..        ..                  ...++..++++|++|.++.............++....+...+-+.+.
T Consensus        79 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la  158 (236)
T 1ooe_A           79 VAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLA  158 (236)
T ss_dssp             CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHH
T ss_pred             CCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHH
Confidence            99831        00                  23445556567999999876543332222233334444444444433


Q ss_pred             -hhh--cccccc
Q 021831          298 -TWY--SYGIGC  306 (307)
Q Consensus       298 -~~~--~~~i~~  306 (307)
                       .+.  .+||++
T Consensus       159 ~e~~~~~~gi~v  170 (236)
T 1ooe_A          159 AKDSGLPDNSAV  170 (236)
T ss_dssp             STTSSCCTTCEE
T ss_pred             HHhcccCCCeEE
Confidence             333  566764

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=97.66  E-value=0.00085  Score=57.58  Aligned_cols=95  Identities=16%  Similarity=0.270  Sum_probs=61.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCc-eEEeCCChh-HHHHhc------CCccEEEECC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE-QAVDYSSKD-IELAIK------GKFDAVLDTI  245 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~-~v~~~~~~~-~~~~~~------~~~dvvid~~  245 (307)
                      .+.++||+||+|++|..+++.+...|++|+.+.+....    ..... ...|.++.+ +.+.+.      +++|++|++.
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~A   82 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG----EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNA   82 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            36889999999999999999999999999988765432    11111 122444432 222221      5799999998


Q ss_pred             CChh----------h---------------HHHHHhccc--CCcEEEEeccCcc
Q 021831          246 GAPE----------T---------------ERLGLNFLK--RGGHYMTLHGETA  272 (307)
Q Consensus       246 g~~~----------~---------------~~~~~~~l~--~~G~~v~~g~~~~  272 (307)
                      |...          .               ...++..+.  ..|++|.++....
T Consensus        83 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  136 (264)
T 2dtx_A           83 GIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQA  136 (264)
T ss_dssp             CCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGG
T ss_pred             CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchh
Confidence            8310          0               233444453  3589999987654

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=97.66  E-value=0.00083  Score=57.28  Aligned_cols=74  Identities=20%  Similarity=0.336  Sum_probs=50.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HH-HHHHcCCc-eEE--eCCChh-HHHHhc------CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-ID-RVLAAGAE-QAV--DYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~-~~~~~g~~-~v~--~~~~~~-~~~~~~------~~~dvv  241 (307)
                      .+.++||+||+|++|..+++.+...|++|+.+.++.. .+ ..++++.. .++  |..+.+ +.+.+.      +++|++
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   90 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA   90 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            4789999999999999999999999999999876543 33 23444432 222  333332 222222      579999


Q ss_pred             EECCCC
Q 021831          242 LDTIGA  247 (307)
Q Consensus       242 id~~g~  247 (307)
                      |++.|.
T Consensus        91 i~~Ag~   96 (265)
T 2o23_A           91 VNCAGI   96 (265)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999873

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.66  E-value=0.00067  Score=58.67  Aligned_cols=74  Identities=18%  Similarity=0.359  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc-eEE--eCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE-QAV--DYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~-~v~--~~~~~~-~~~~~~------~~~  238 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.++.+ .+.    +++.+.. ..+  |.++.+ ..+.+.      +++
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  110 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI  110 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999877543 222    2333322 222  444432 222222      589


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|++.|.
T Consensus       111 D~lvnnAg~  119 (276)
T 3r1i_A          111 DIAVCNAGI  119 (276)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=97.66  E-value=0.00048  Score=58.39  Aligned_cols=133  Identities=19%  Similarity=0.264  Sum_probs=77.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc--cHHH----HHHcCCce-EE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK--SIDR----VLAAGAEQ-AV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~--~~~~----~~~~g~~~-v~--~~~~~~-~~~~~~------~~  237 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.+..  +.+.    ++..+... .+  |.++.+ ..+.+.      ++
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            467899999999999999999999999998875532  2221    23344332 22  333332 222221      58


Q ss_pred             ccEEEECCCCh----------h---------------hHHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHH
Q 021831          238 FDAVLDTIGAP----------E---------------TERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       238 ~dvvid~~g~~----------~---------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      +|++|++.|..          +               ....++..+  +..|++|.++.............++....+..
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  162 (246)
T 3osu_A           83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVI  162 (246)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHH
Confidence            99999998842          0               112333333  45789999987544333333333444444444


Q ss_pred             HHHHHHh-hhhcccccc
Q 021831          291 LLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~-~~~~~~i~~  306 (307)
                      .+-+.+. .+..+||++
T Consensus       163 ~~~~~la~e~~~~gi~v  179 (246)
T 3osu_A          163 GLTKSAARELASRGITV  179 (246)
T ss_dssp             HHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHhcccCeEE
Confidence            4444433 445667765

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=97.66  E-value=0.0012  Score=57.14  Aligned_cols=133  Identities=17%  Similarity=0.188  Sum_probs=78.1

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCccHHH---H-HHcCCceEE--eCCChh-HHH---Hhc---CCc
Q 021831          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKSIDR---V-LAAGAEQAV--DYSSKD-IEL---AIK---GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~--g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~---~-~~~g~~~v~--~~~~~~-~~~---~~~---~~~  238 (307)
                      .+.++||+||+  +++|.+.++.+...|++|+.+.+....+.   + .+.+....+  |.++.+ ..+   .+.   +++
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  104 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGL  104 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSC
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence            57899999988  56999999999899999998877653222   2 223332333  333332 222   221   579


Q ss_pred             cEEEECCCChh------------------------------hHHHHHhccc-CCcEEEEeccCcccccccccceechhHH
Q 021831          239 DAVLDTIGAPE------------------------------TERLGLNFLK-RGGHYMTLHGETAALADHYGLALGLPIA  287 (307)
Q Consensus       239 dvvid~~g~~~------------------------------~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~~~~~~  287 (307)
                      |++|++.|...                              ....++..+. .+|++|.++.............++....
T Consensus       105 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  184 (280)
T 3nrc_A          105 DAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMGVAKA  184 (280)
T ss_dssp             CEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTTHHHHHHHH
T ss_pred             CEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCchhhHHHHH
Confidence            99999987421                              0123333443 5799999987655433333333344444


Q ss_pred             HHHHHHHHHh-hhhcccccc
Q 021831          288 TTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       288 ~~~~~~~~~~-~~~~~~i~~  306 (307)
                      +...+-+.+. .+..+||++
T Consensus       185 al~~~~~~la~e~~~~gi~v  204 (280)
T 3nrc_A          185 SLEATVRYTALALGEDGIKV  204 (280)
T ss_dssp             HHHHHHHHHHHHHGGGTCEE
T ss_pred             HHHHHHHHHHHHHHHcCcEE
Confidence            4444444433 445567764

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.66  E-value=0.00079  Score=58.89  Aligned_cols=133  Identities=18%  Similarity=0.236  Sum_probs=77.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCC---c-eE--EeCCChh-HHHHhc------
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGA---E-QA--VDYSSKD-IELAIK------  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~---~-~v--~~~~~~~-~~~~~~------  235 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.++.+. +.    +.+.+.   . ..  .|..+.+ ..+.+.      
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  104 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF  104 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            47899999999999999999999999999998776432 21    222232   1 22  2444432 222221      


Q ss_pred             CCccEEEECCCChh---------------------------hHHHHHhcc-cCCcEEEEeccCcccccc-cccceechhH
Q 021831          236 GKFDAVLDTIGAPE---------------------------TERLGLNFL-KRGGHYMTLHGETAALAD-HYGLALGLPI  286 (307)
Q Consensus       236 ~~~dvvid~~g~~~---------------------------~~~~~~~~l-~~~G~~v~~g~~~~~~~~-~~~~~~~~~~  286 (307)
                      +++|++|++.|...                           ....++..+ +.+|++|.++........ .....++...
T Consensus       105 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~~Y~asK  184 (297)
T 1xhl_A          105 GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAK  184 (297)
T ss_dssp             SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHHHH
T ss_pred             CCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCCCCCcchHHHHH
Confidence            57999999987310                           113344444 245999999875443222 2222333333


Q ss_pred             HHHHHHHHHHh-hhhcccccc
Q 021831          287 ATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       287 ~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      .+...+-+.+. .+..+||++
T Consensus       185 aa~~~l~~~la~el~~~gI~v  205 (297)
T 1xhl_A          185 AALDQYTRCTAIDLIQHGVRV  205 (297)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEE
T ss_pred             HHHHHHHHHHHHHhcccCeEE
Confidence            33433333333 344567765

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.65  E-value=0.00048  Score=59.46  Aligned_cols=133  Identities=17%  Similarity=0.200  Sum_probs=76.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-------------cHH----HHHHcCCc-eE--EeCCChh-HHH
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-------------SID----RVLAAGAE-QA--VDYSSKD-IEL  232 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-------------~~~----~~~~~g~~-~v--~~~~~~~-~~~  232 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.+.+             +.+    .++..+.. ..  .|.++.+ ..+
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   91 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA   91 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            578999999999999999999999999999886541             111    12233432 22  2344332 222


Q ss_pred             Hhc------CCccEEEECCCCh------h---------------hHHHHHhccc---CCcEEEEeccCcccccc----cc
Q 021831          233 AIK------GKFDAVLDTIGAP------E---------------TERLGLNFLK---RGGHYMTLHGETAALAD----HY  278 (307)
Q Consensus       233 ~~~------~~~dvvid~~g~~------~---------------~~~~~~~~l~---~~G~~v~~g~~~~~~~~----~~  278 (307)
                      .+.      +++|++|++.|..      +               ....++..|.   .+|++|.++........    ..
T Consensus        92 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  171 (278)
T 3sx2_A           92 ALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPG  171 (278)
T ss_dssp             HHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCSSHH
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccCCCC
Confidence            222      5899999998842      1               1123444443   36899999876442221    11


Q ss_pred             cceechhHHHHHHHHHHHh-hhhcccccc
Q 021831          279 GLALGLPIATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ...++....+...+-+.+. .+..+||++
T Consensus       172 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v  200 (278)
T 3sx2_A          172 SVGYVAAKHGVVGLMRVYANLLAGQMIRV  200 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             chHhHHHHHHHHHHHHHHHHHHhccCcEE
Confidence            2223333333333333333 445667765

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=97.65  E-value=0.00046  Score=58.73  Aligned_cols=133  Identities=14%  Similarity=0.144  Sum_probs=74.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCccH---HHHHHc--CCc-eE--EeCCCh--hHHHHhc------C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI---DRVLAA--GAE-QA--VDYSSK--DIELAIK------G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~-Vi~~~~~~~~---~~~~~~--g~~-~v--~~~~~~--~~~~~~~------~  236 (307)
                      .+.++||+||+|++|...++.+...|++ |+.+.++...   +.+.+.  +.. ..  .|.++.  +..+.+.      +
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            4688999999999999999999999995 8887766432   222222  221 22  244433  2222222      5


Q ss_pred             CccEEEECCCCh--h---------------hHHHHHhcccC-----CcEEEEeccCcccccccccceechhHHHHHHHHH
Q 021831          237 KFDAVLDTIGAP--E---------------TERLGLNFLKR-----GGHYMTLHGETAALADHYGLALGLPIATTVLLKK  294 (307)
Q Consensus       237 ~~dvvid~~g~~--~---------------~~~~~~~~l~~-----~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (307)
                      ++|++|++.|..  .               ....++..+..     +|++|.++.............++....+...+-+
T Consensus        84 ~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  163 (254)
T 1sby_A           84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTN  163 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHHHHHHHHHHHHH
Confidence            799999999841  1               12334444432     5899999876543222222233333333333333


Q ss_pred             HHhhh-hcccccc
Q 021831          295 RMQTW-YSYGIGC  306 (307)
Q Consensus       295 ~~~~~-~~~~i~~  306 (307)
                      .+... ..+||++
T Consensus       164 ~la~~~~~~gi~v  176 (254)
T 1sby_A          164 SLAKLAPITGVTA  176 (254)
T ss_dssp             HHHHHHHHHSEEE
T ss_pred             HHHHHhccCCeEE
Confidence            33322 2356654

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=97.64  E-value=0.00062  Score=58.83  Aligned_cols=74  Identities=22%  Similarity=0.307  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eE--EeCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QA--VDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v--~~~~~~~-~~~~~~------~~~  238 (307)
                      .+.++||+||+|++|.++++.+...|++|+.+.++.+. +.    +++.+.. ..  .|.++.+ +.+.+.      +++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  100 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV  100 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999999988776432 21    2233432 22  2344332 222221      579


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|++.|.
T Consensus       101 D~lv~~Ag~  109 (277)
T 2rhc_B          101 DVLVNNAGR  109 (277)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=97.63  E-value=0.00028  Score=59.99  Aligned_cols=129  Identities=16%  Similarity=0.235  Sum_probs=73.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HHHHHcCCceEEeCCChh-HHHHhc------CCccEEEECC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKD-IELAIK------GKFDAVLDTI  245 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~~~~g~~~v~~~~~~~-~~~~~~------~~~dvvid~~  245 (307)
                      .+.++||+||+|++|.++++.+...|++|+.+.++... +.+.  +  ...|.++.+ ..+.+.      +++|++|++.
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--~--~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~A   89 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF--G--VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNA   89 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE--E--EECCTTCHHHHHHHHHHHHHHHSSCSEEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc--C--eeccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            46899999999999999999999999999988765421 1111  1  233444432 222221      5789999998


Q ss_pred             CChh-------------------------hHHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHHHHHH-Hh
Q 021831          246 GAPE-------------------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKR-MQ  297 (307)
Q Consensus       246 g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  297 (307)
                      |...                         ....++..|+  ..|++|.++.............++....+...+-+. ..
T Consensus        90 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~  169 (247)
T 1uzm_A           90 GLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIAR  169 (247)
T ss_dssp             SCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHHHHHHHHHHHHH
Confidence            8421                         1123333442  358999998765432222222233333333333333 33


Q ss_pred             hhhcccccc
Q 021831          298 TWYSYGIGC  306 (307)
Q Consensus       298 ~~~~~~i~~  306 (307)
                      .+..+||++
T Consensus       170 e~~~~gi~v  178 (247)
T 1uzm_A          170 ELSKANVTA  178 (247)
T ss_dssp             HHGGGTEEE
T ss_pred             HhhhcCcEE
Confidence            445567764

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.63  E-value=0.00071  Score=58.32  Aligned_cols=133  Identities=14%  Similarity=0.211  Sum_probs=74.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHc---C---Cc-eE--EeCCChh-HHHHhc------
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAA---G---AE-QA--VDYSSKD-IELAIK------  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~---g---~~-~v--~~~~~~~-~~~~~~------  235 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.++.+ .+. .+++   .   .. ..  .|.++.+ +.+.+.      
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   84 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999998889999999877643 222 2222   2   11 22  2444432 222222      


Q ss_pred             CCccEEEECCCChh--------------h---------------HHHHHhccc-CCcEEEEeccCcc-cccccccceech
Q 021831          236 GKFDAVLDTIGAPE--------------T---------------ERLGLNFLK-RGGHYMTLHGETA-ALADHYGLALGL  284 (307)
Q Consensus       236 ~~~dvvid~~g~~~--------------~---------------~~~~~~~l~-~~G~~v~~g~~~~-~~~~~~~~~~~~  284 (307)
                      +++|++|++.|...              .               ...++..|+ .+|++|.++.... .........++.
T Consensus        85 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~  164 (278)
T 1spx_A           85 GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSI  164 (278)
T ss_dssp             SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSHHHHH
T ss_pred             CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccCCCCccHHHH
Confidence            58999999987421              0               123333332 2599999987654 322222222333


Q ss_pred             hHHHHHHHHHHHh-hhhcccccc
Q 021831          285 PIATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       285 ~~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      .......+-+.+. .+..+||++
T Consensus       165 sK~a~~~~~~~la~e~~~~gi~v  187 (278)
T 1spx_A          165 AKAAIDQYTRNTAIDLIQHGIRV  187 (278)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             HHHHHHHHHHHHHHHHHhcCcEE
Confidence            3333333333333 344567764

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.63  E-value=0.00062  Score=57.68  Aligned_cols=133  Identities=17%  Similarity=0.223  Sum_probs=75.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HHHHHcCCceE--EeCCChhHHHHh-c--CCccEEEECCCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQA--VDYSSKDIELAI-K--GKFDAVLDTIGA  247 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~~~~g~~~v--~~~~~~~~~~~~-~--~~~dvvid~~g~  247 (307)
                      .+.++||+||+|++|...++.+...|++|+.+.++.+. +.+.++.....  .|.++.+..+.+ .  +++|++|++.|.
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag~   84 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGF   84 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCcc
Confidence            47899999999999999999999999999988765432 11112221122  244443322222 2  579999999884


Q ss_pred             h----------hh---------------HHHHHhcc--cCCcEEEEeccCccccccc-ccceechhHHHHHHHHHHHh-h
Q 021831          248 P----------ET---------------ERLGLNFL--KRGGHYMTLHGETAALADH-YGLALGLPIATTVLLKKRMQ-T  298 (307)
Q Consensus       248 ~----------~~---------------~~~~~~~l--~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~  298 (307)
                      .          ..               ...++..|  +..|++|.++......... ....++....+...+-+.+. .
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e  164 (246)
T 2ag5_A           85 VHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAAD  164 (246)
T ss_dssp             CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence            1          11               12233333  2468999998765432222 22223333333333333333 3


Q ss_pred             hhcccccc
Q 021831          299 WYSYGIGC  306 (307)
Q Consensus       299 ~~~~~i~~  306 (307)
                      +.++||++
T Consensus       165 ~~~~gi~v  172 (246)
T 2ag5_A          165 FIQQGIRC  172 (246)
T ss_dssp             HGGGTEEE
T ss_pred             hhhcCcEE
Confidence            44557764

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=97.63  E-value=0.00034  Score=59.28  Aligned_cols=131  Identities=19%  Similarity=0.123  Sum_probs=76.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-e--CCcc-HHH-HHHc-CCceEEeCCC-hhHHHHhc---CCccEEEEC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-C--GSKS-IDR-VLAA-GAEQAVDYSS-KDIELAIK---GKFDAVLDT  244 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~-~--~~~~-~~~-~~~~-g~~~v~~~~~-~~~~~~~~---~~~dvvid~  244 (307)
                      |.++||+||+|++|.+.++.+...|++|+.+ .  ++.+ .+. ..++ +. .+.+... ..+.+.+.   +++|++|++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~g~iD~lv~~   79 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT-IALAEQKPERLVDATLQHGEAIDTIVSN   79 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTE-EECCCCCGGGHHHHHGGGSSCEEEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCC-cccCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4689999999999999999999999999988 5  5533 222 3344 32 2333332 23334332   579999999


Q ss_pred             CCChhh----------------------------HHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHHHHH
Q 021831          245 IGAPET----------------------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLLKK  294 (307)
Q Consensus       245 ~g~~~~----------------------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (307)
                      .|....                            ...++..|+  .+|++|.++.............++....+...+-+
T Consensus        80 Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~  159 (244)
T 1zmo_A           80 DYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVE  159 (244)
T ss_dssp             CCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHHHHHHHHHH
T ss_pred             CCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHHHHHHHHHH
Confidence            873211                            123344442  35899999876543333333334444444444444


Q ss_pred             HHh-hhhcccccc
Q 021831          295 RMQ-TWYSYGIGC  306 (307)
Q Consensus       295 ~~~-~~~~~~i~~  306 (307)
                      .+. .+..+||++
T Consensus       160 ~la~e~~~~gi~v  172 (244)
T 1zmo_A          160 SAAKTLSRDGILL  172 (244)
T ss_dssp             HHHHHHGGGTEEE
T ss_pred             HHHHHHhhcCcEE
Confidence            433 445567765

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.63  E-value=0.00061  Score=58.68  Aligned_cols=74  Identities=19%  Similarity=0.285  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc-eEE--eCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE-QAV--DYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~-~v~--~~~~~~-~~~~~~------~~~  238 (307)
                      .+.++||+||+|++|...++.+...|++|+.+.+... .+.    +++.+.. ..+  |..+.+ +.+.+.      +++
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  109 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV  109 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            4789999999999999999999999999998877543 221    2233432 222  333332 222221      579


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|++.|.
T Consensus       110 D~li~~Ag~  118 (272)
T 1yb1_A          110 SILVNNAGV  118 (272)
T ss_dssp             SEEEECCCC
T ss_pred             cEEEECCCc
Confidence            999999874

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=97.62  E-value=0.00084  Score=58.30  Aligned_cols=74  Identities=18%  Similarity=0.189  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-c-HHH-HH----HcCCc-eE--EeCCC----hh-HHHHhc---
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-S-IDR-VL----AAGAE-QA--VDYSS----KD-IELAIK---  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~-~~~-~~----~~g~~-~v--~~~~~----~~-~~~~~~---  235 (307)
                      .|.++||+||++++|.++++.+...|++|+.+.+.. + .+. ..    +.+.. ..  .|.++    .+ ..+.+.   
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~  101 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF  101 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence            478999999999999999999988999999887765 3 211 12    23332 12  24444    22 222111   


Q ss_pred             ---CCccEEEECCCC
Q 021831          236 ---GKFDAVLDTIGA  247 (307)
Q Consensus       236 ---~~~dvvid~~g~  247 (307)
                         +++|++|++.|.
T Consensus       102 ~~~g~iD~lvnnAG~  116 (288)
T 2x9g_A          102 RAFGRCDVLVNNASA  116 (288)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HhcCCCCEEEECCCC
Confidence               579999999874

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.62  E-value=0.0004  Score=59.11  Aligned_cols=135  Identities=16%  Similarity=0.173  Sum_probs=77.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCc-cH-H---HHHHcCCc-eEE--eCCChh-HHHHhc------
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC-GSK-SI-D---RVLAAGAE-QAV--DYSSKD-IELAIK------  235 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~-~~~-~~-~---~~~~~g~~-~v~--~~~~~~-~~~~~~------  235 (307)
                      ..++.++||+||++++|...++.+...|++|+.+. +.. +. .   .+++.+.. ..+  |..+.+ ..+.+.      
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV   89 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence            35688999999999999999999989999998876 332 22 1   23334432 222  333322 222221      


Q ss_pred             CCccEEEECCCChh----------h---------------HHHHHhccc--CCcEEEEeccCcccccccccceechhHHH
Q 021831          236 GKFDAVLDTIGAPE----------T---------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIAT  288 (307)
Q Consensus       236 ~~~dvvid~~g~~~----------~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  288 (307)
                      +++|++|++.|...          .               ...++..+.  ..|++|.++.............++....+
T Consensus        90 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  169 (256)
T 3ezl_A           90 GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAG  169 (256)
T ss_dssp             CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHHHHH
Confidence            57999999988420          0               123344443  45899999987654443333334444444


Q ss_pred             HHHHHHHHh-hhhcccccc
Q 021831          289 TVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       289 ~~~~~~~~~-~~~~~~i~~  306 (307)
                      ...+-+.+. .+..+||++
T Consensus       170 ~~~~~~~la~e~~~~gi~v  188 (256)
T 3ezl_A          170 IHGFTMSLAQEVATKGVTV  188 (256)
T ss_dssp             HHHHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHHHHHhCCEE
Confidence            444444433 344556764

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=97.62  E-value=0.00073  Score=58.58  Aligned_cols=133  Identities=14%  Similarity=0.164  Sum_probs=78.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-c-HHH-H---HHc-CCc-eEE--eCCChh-HHHHhc------C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-S-IDR-V---LAA-GAE-QAV--DYSSKD-IELAIK------G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~-~~~-~---~~~-g~~-~v~--~~~~~~-~~~~~~------~  236 (307)
                      .+.++||+||++++|.+.++.+...|++|+.+.+.. + .+. .   .+. +.. ..+  |.++.+ ..+.+.      +
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  103 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG  103 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence            478999999999999999999999999999887633 2 222 2   222 222 222  333332 222221      5


Q ss_pred             CccEEEECCCCh----------hh---------------HHHHHhccc--CCcEEEEeccCcccccccccceechhHHHH
Q 021831          237 KFDAVLDTIGAP----------ET---------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATT  289 (307)
Q Consensus       237 ~~dvvid~~g~~----------~~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  289 (307)
                      ++|++|++.|..          +.               ...++..|+  ..|++|.++.............++....+.
T Consensus       104 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  183 (281)
T 3v2h_A          104 GADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGI  183 (281)
T ss_dssp             SCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHHHHHHH
Confidence            899999998841          01               123333443  458999998765543333333344444444


Q ss_pred             HHHHHHHh-hhhcccccc
Q 021831          290 VLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       290 ~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+-+.+. .+..+||++
T Consensus       184 ~~l~~~la~e~~~~gI~v  201 (281)
T 3v2h_A          184 MGLTKTVALEVAESGVTV  201 (281)
T ss_dssp             HHHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHhhhcCcEE
Confidence            44444443 445567765

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.61  E-value=0.00064  Score=58.70  Aligned_cols=74  Identities=23%  Similarity=0.324  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCC-c--eEE--eCCChh-HHHHhc------C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGA-E--QAV--DYSSKD-IELAIK------G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~-~--~v~--~~~~~~-~~~~~~------~  236 (307)
                      .+.++||+||+|++|..+++.+...|++|+.+.++.. .+.    +++.+. .  .++  |..+.+ +.+.+.      +
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  110 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS  110 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            4689999999999999999999899999999877643 221    233332 1  222  344332 222221      5


Q ss_pred             CccEEEECCCC
Q 021831          237 KFDAVLDTIGA  247 (307)
Q Consensus       237 ~~dvvid~~g~  247 (307)
                      ++|++|++.|.
T Consensus       111 ~iD~vi~~Ag~  121 (279)
T 1xg5_A          111 GVDICINNAGL  121 (279)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999883

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=97.61  E-value=0.00042  Score=58.52  Aligned_cols=130  Identities=22%  Similarity=0.220  Sum_probs=76.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceE--EeCCCh-hHHHHhc--------CCccEE
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQA--VDYSSK-DIELAIK--------GKFDAV  241 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v--~~~~~~-~~~~~~~--------~~~dvv  241 (307)
                      ..+.++||+||+|++|...++.+...|++|+.+.++.....    +....  .|.++. +..+.+.        +++|++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~l   80 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI   80 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            35789999999999999999999999999999877643211    11111  122222 2222222        479999


Q ss_pred             EECCCCh--------h------------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHHHHHHHHHH
Q 021831          242 LDTIGAP--------E------------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKR  295 (307)
Q Consensus       242 id~~g~~--------~------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (307)
                      |++.|..        .                  ....++..++.+|++|.++.............++........+-+.
T Consensus        81 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~  160 (241)
T 1dhr_A           81 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQS  160 (241)
T ss_dssp             EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHH
T ss_pred             EEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCCchHHHHHHHHHHHHHHH
Confidence            9998831        0                  1123445555679999998765433322223334444444444444


Q ss_pred             Hh-hhh--cccccc
Q 021831          296 MQ-TWY--SYGIGC  306 (307)
Q Consensus       296 ~~-~~~--~~~i~~  306 (307)
                      +. .+.  .+||++
T Consensus       161 la~e~~~~~~gi~v  174 (241)
T 1dhr_A          161 LAGKNSGMPSGAAA  174 (241)
T ss_dssp             HTSTTSSCCTTCEE
T ss_pred             HHHHhccCCCCeEE
Confidence            44 333  567764

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=97.61  E-value=0.00036  Score=61.80  Aligned_cols=133  Identities=19%  Similarity=0.233  Sum_probs=77.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC----------c-cHH----HHHHcCCceEE---eCCChh-HHHHh
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS----------K-SID----RVLAAGAEQAV---DYSSKD-IELAI  234 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~----------~-~~~----~~~~~g~~~v~---~~~~~~-~~~~~  234 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.+.          . ..+    .+...+....+   |.++.+ ..+.+
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  105 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLI  105 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            57899999999999999999998999999988654          2 221    12334433222   333322 22212


Q ss_pred             c------CCccEEEECCCChh----------h---------------HHHHHhcccC--------CcEEEEeccCccccc
Q 021831          235 K------GKFDAVLDTIGAPE----------T---------------ERLGLNFLKR--------GGHYMTLHGETAALA  275 (307)
Q Consensus       235 ~------~~~dvvid~~g~~~----------~---------------~~~~~~~l~~--------~G~~v~~g~~~~~~~  275 (307)
                      .      +++|++|++.|...          .               ...+...+..        +|++|.++.......
T Consensus       106 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~  185 (322)
T 3qlj_A          106 QTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQG  185 (322)
T ss_dssp             HHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccC
Confidence            1      58999999998410          0               1122222321        489999987654333


Q ss_pred             ccccceechhHHHHHHHHHHHh-hhhcccccc
Q 021831          276 DHYGLALGLPIATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ......++....+...+-+.+. .+..+||++
T Consensus       186 ~~~~~~Y~asKaal~~l~~~la~e~~~~gI~v  217 (322)
T 3qlj_A          186 SVGQGNYSAAKAGIATLTLVGAAEMGRYGVTV  217 (322)
T ss_dssp             BTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhcccCcEE
Confidence            3333334444444444444443 455667765

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=97.60  E-value=0.0012  Score=55.45  Aligned_cols=73  Identities=29%  Similarity=0.369  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHcCCceEE--eCCChh-HHHHhc--CCccEEEECCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAAGAEQAV--DYSSKD-IELAIK--GKFDAVLDTIG  246 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~g~~~v~--~~~~~~-~~~~~~--~~~dvvid~~g  246 (307)
                      .+.++||+||+|.+|...++.+...|++|+.+.++.. .+. .++.....++  |..+.+ +.+.+.  +++|++|++.|
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag   85 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCc
Confidence            4789999999999999999999999999998877643 222 2223222233  334332 333333  46899999988

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.60  E-value=0.0015  Score=54.72  Aligned_cols=131  Identities=18%  Similarity=0.171  Sum_probs=74.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HH----HcCCc-eEE--eCCChh-HHHHhc------CCc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VL----AAGAE-QAV--DYSSKD-IELAIK------GKF  238 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~----~~g~~-~v~--~~~~~~-~~~~~~------~~~  238 (307)
                      +.++||+||+|++|...++.+...|++|+.+.++.+. +. ..    ..+.. ..+  |.++.+ ..+.+.      +++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            6789999999999999999999999999988776432 21 11    33433 222  444433 222222      579


Q ss_pred             cEEEECCCCh----------hh---------------HHHHHhcc-cCCcEEEEeccCcccccccccceechhHHHHHHH
Q 021831          239 DAVLDTIGAP----------ET---------------ERLGLNFL-KRGGHYMTLHGETAALADHYGLALGLPIATTVLL  292 (307)
Q Consensus       239 dvvid~~g~~----------~~---------------~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  292 (307)
                      |++|++.|..          +.               ...++..| +.+|+++.++.............++....+...+
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~  161 (235)
T 3l77_A           82 DVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAARAL  161 (235)
T ss_dssp             SEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTCHHHHHHHHHHHHH
T ss_pred             CEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCcchHHHHHHHHHHH
Confidence            9999998841          11               12333334 3467888777654433322333333344444444


Q ss_pred             HHHHhhhhcccccc
Q 021831          293 KKRMQTWYSYGIGC  306 (307)
Q Consensus       293 ~~~~~~~~~~~i~~  306 (307)
                      -+.+ .+..++|++
T Consensus       162 ~~~l-~~~~~~i~v  174 (235)
T 3l77_A          162 VRTF-QIENPDVRF  174 (235)
T ss_dssp             HHHH-HHHCTTSEE
T ss_pred             HHHH-hhcCCCeEE
Confidence            4444 223456654

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=97.59  E-value=0.00078  Score=58.21  Aligned_cols=133  Identities=21%  Similarity=0.161  Sum_probs=78.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H-HHHHcCCc-eEE--eCCChh-HHH---Hhc--CCccEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAGAE-QAV--DYSSKD-IEL---AIK--GKFDAVL  242 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~-~~~~~g~~-~v~--~~~~~~-~~~---~~~--~~~dvvi  242 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.++.+. + ...+++.. ..+  |.++.+ ..+   .+.  ++.|++|
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv  108 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV  108 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence            47899999999999999999998999999988776442 2 23445543 222  333332 222   222  4789999


Q ss_pred             ECCCCh-------------h------------------hHHHHHhcc--------cCCcEEEEeccCcccccccccceec
Q 021831          243 DTIGAP-------------E------------------TERLGLNFL--------KRGGHYMTLHGETAALADHYGLALG  283 (307)
Q Consensus       243 d~~g~~-------------~------------------~~~~~~~~l--------~~~G~~v~~g~~~~~~~~~~~~~~~  283 (307)
                      ++.++.             .                  ....++..+        +.+|++|.++.............++
T Consensus       109 ~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  188 (281)
T 3ppi_A          109 VAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYA  188 (281)
T ss_dssp             ECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             EccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCCCcccH
Confidence            983320             0                  011222233        3578999998876544433334444


Q ss_pred             hhHHHHHHHHHHHh-hhhcccccc
Q 021831          284 LPIATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       284 ~~~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ....+...+-+.+. .+..+||++
T Consensus       189 asKaa~~~~~~~la~e~~~~gi~v  212 (281)
T 3ppi_A          189 AAKAGVIGLTIAAARDLSSAGIRV  212 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEE
Confidence            44444444444444 444556764

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=97.59  E-value=0.00063  Score=57.82  Aligned_cols=130  Identities=16%  Similarity=0.190  Sum_probs=76.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHcCCc-eE--EeCCChh-HHHHhc------CCccEEEEC
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAAGAE-QA--VDYSSKD-IELAIK------GKFDAVLDT  244 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~g~~-~v--~~~~~~~-~~~~~~------~~~dvvid~  244 (307)
                      ++||+||+|++|.+.++.+...|++|+.+.++.+ .+. ..+++.. ..  .|.++.+ +.+.+.      +++|++|++
T Consensus         2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnn   81 (248)
T 3asu_A            2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNN   81 (248)
T ss_dssp             EEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEEC
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            6899999999999999999999999998877543 222 3344322 22  2444432 222222      479999999


Q ss_pred             CCChh-----------h---------------HHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHHHHHHHH
Q 021831          245 IGAPE-----------T---------------ERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM  296 (307)
Q Consensus       245 ~g~~~-----------~---------------~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (307)
                      .|...           .               ...++..|  +..|++|.++.............++........+-+.+
T Consensus        82 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~l  161 (248)
T 3asu_A           82 AGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNL  161 (248)
T ss_dssp             CCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHHHHHHH
Confidence            87320           0               12333344  24699999987654333222233344444444444443


Q ss_pred             h-hhhcccccc
Q 021831          297 Q-TWYSYGIGC  306 (307)
Q Consensus       297 ~-~~~~~~i~~  306 (307)
                      . .+..+||++
T Consensus       162 a~e~~~~gi~v  172 (248)
T 3asu_A          162 RTDLHGTAVRV  172 (248)
T ss_dssp             HHHTTTSCCEE
T ss_pred             HHHhhhcCcEE
Confidence            3 445567765

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.58  E-value=0.00083  Score=64.74  Aligned_cols=133  Identities=18%  Similarity=0.226  Sum_probs=82.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHH---HHHHcCCceEEeCCCh--h---HHHHhc---CCccEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSID---RVLAAGAEQAVDYSSK--D---IELAIK---GKFDAVL  242 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~---~~~~~g~~~v~~~~~~--~---~~~~~~---~~~dvvi  242 (307)
                      .|+.+||+||++++|.+.++.+...|++|+...+....+   .+++.|...+....+-  +   +.+.+.   +++|++|
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLV  400 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILV  400 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEE
Confidence            367899999999999999999999999998875432222   2344454433332222  1   122221   6899999


Q ss_pred             ECCCCh----------h---------------hHHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHHHHHH
Q 021831          243 DTIGAP----------E---------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKR  295 (307)
Q Consensus       243 d~~g~~----------~---------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (307)
                      ++.|..          +               ....++..|+  .+|++|.++.............++....+...+.+.
T Consensus       401 nNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal~~lt~~  480 (604)
T 2et6_A          401 NNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKT  480 (604)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHHHHHHHHHH
Confidence            998841          0               1134555563  469999998765433333334455555555555555


Q ss_pred             Hh-hhhcccccc
Q 021831          296 MQ-TWYSYGIGC  306 (307)
Q Consensus       296 ~~-~~~~~~i~~  306 (307)
                      +. .+..+||++
T Consensus       481 la~El~~~gIrV  492 (604)
T 2et6_A          481 MAIEGAKNNIKV  492 (604)
T ss_dssp             HHHHHGGGTEEE
T ss_pred             HHHHhCccCeEE
Confidence            44 556778876

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=97.58  E-value=0.00096  Score=56.59  Aligned_cols=133  Identities=16%  Similarity=0.250  Sum_probs=77.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCcc-HHH----HHHcCCc-eEE--eCCChh-HH---HHhc-----
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC-GSKS-IDR----VLAAGAE-QAV--DYSSKD-IE---LAIK-----  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~-~~~~-~~~----~~~~g~~-~v~--~~~~~~-~~---~~~~-----  235 (307)
                      .+.++||+||++++|.+.++.+...|++|+.+. ++.+ .+.    +...+.. ..+  |..+.+ ..   +.+.     
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence            578999999999999999999999999988864 3332 111    2233332 222  333322 11   1111     


Q ss_pred             ----CCccEEEECCCCh----------h---------------hHHHHHhcccCCcEEEEeccCcccccccccceechhH
Q 021831          236 ----GKFDAVLDTIGAP----------E---------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPI  286 (307)
Q Consensus       236 ----~~~dvvid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~  286 (307)
                          +.+|++|++.|..          .               ....++..++++|++|.++.............++...
T Consensus        86 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK  165 (255)
T 3icc_A           86 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTK  165 (255)
T ss_dssp             HHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             cccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCCcchhHHhH
Confidence                2499999998841          0               1133445566789999999765543333333344444


Q ss_pred             HHHHHHHHHHh-hhhcccccc
Q 021831          287 ATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       287 ~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      .+...+-+.+. .+..+||++
T Consensus       166 aa~~~~~~~la~e~~~~gi~v  186 (255)
T 3icc_A          166 GAINTMTFTLAKQLGARGITV  186 (255)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEE
T ss_pred             HHHHHHHHHHHHHHHhcCeEE
Confidence            44444444443 344557764

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=97.58  E-value=0.00072  Score=57.29  Aligned_cols=74  Identities=20%  Similarity=0.341  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHcCCc--eEE--eCCChh-HHHHhc-----CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGAE--QAV--DYSSKD-IELAIK-----GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~g~~--~v~--~~~~~~-~~~~~~-----~~~dvv  241 (307)
                      .+.++||+||+|.+|...++.+...|++|+.+.++.+. +. .++++..  ..+  |..+.+ +.+.+.     +++|++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   89 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL   89 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence            46899999999999999999999999999998776432 22 3333322  222  344332 222221     579999


Q ss_pred             EECCCC
Q 021831          242 LDTIGA  247 (307)
Q Consensus       242 id~~g~  247 (307)
                      |++.|.
T Consensus        90 i~~Ag~   95 (254)
T 2wsb_A           90 VNSAGI   95 (254)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999874

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=97.58  E-value=0.0013  Score=56.32  Aligned_cols=133  Identities=20%  Similarity=0.298  Sum_probs=77.4

Q ss_pred             CCCEEEEEcCCc-hHHHHHHHHHHHcCCEEEEEeCCccH-HH-HH---HcCC--ceEE--eCCChh-HHHHhc------C
Q 021831          174 EGQRLLVLGGGG-AVGFAAVQFSVASGCHVSATCGSKSI-DR-VL---AAGA--EQAV--DYSSKD-IELAIK------G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g-~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~---~~g~--~~v~--~~~~~~-~~~~~~------~  236 (307)
                      .+.++||+||+| ++|...++.+...|++|+.+.+..+. +. .+   +.+.  ...+  |.++.+ +.+.+.      +
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  100 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAG  100 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence            478999999975 89999999988999999988776432 22 22   2221  1222  334332 222221      5


Q ss_pred             CccEEEECCCCh----------h---------------hHHHHHhccc---CCcEEEEeccCcccccccccceechhHHH
Q 021831          237 KFDAVLDTIGAP----------E---------------TERLGLNFLK---RGGHYMTLHGETAALADHYGLALGLPIAT  288 (307)
Q Consensus       237 ~~dvvid~~g~~----------~---------------~~~~~~~~l~---~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  288 (307)
                      ++|++|++.|..          +               ....++..+.   .+|++|.++.............++....+
T Consensus       101 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  180 (266)
T 3o38_A          101 RLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAG  180 (266)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHHHHHHH
Confidence            799999998841          0               0123334443   56889998876543333333334444444


Q ss_pred             HHHHHHHHh-hhhcccccc
Q 021831          289 TVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       289 ~~~~~~~~~-~~~~~~i~~  306 (307)
                      ...+-+.+. .+..+||++
T Consensus       181 ~~~~~~~la~e~~~~gi~v  199 (266)
T 3o38_A          181 VMALTRCSAIEAVEFGVRI  199 (266)
T ss_dssp             HHHHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHHHHHcCcEE
Confidence            444444433 345567764

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=97.58  E-value=0.00095  Score=58.08  Aligned_cols=133  Identities=13%  Similarity=0.151  Sum_probs=78.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC---EEEEEeCCcc-HHH-HHH---c--CCc-eE--EeCCCh-hHHHHhc----
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGC---HVSATCGSKS-IDR-VLA---A--GAE-QA--VDYSSK-DIELAIK----  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~---~Vi~~~~~~~-~~~-~~~---~--g~~-~v--~~~~~~-~~~~~~~----  235 (307)
                      .|.++||+||++++|.+.++.+...|+   +|+.+.++.+ .+. .++   .  +.. ..  .|.++. +..+.+.    
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            378999999999999998887777776   8888876643 222 222   1  322 12  244443 3333222    


Q ss_pred             --CCccEEEECCCChh-----------h---------------HHHHHhcc--cCCcEEEEeccCcccccccccceechh
Q 021831          236 --GKFDAVLDTIGAPE-----------T---------------ERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLP  285 (307)
Q Consensus       236 --~~~dvvid~~g~~~-----------~---------------~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~  285 (307)
                        +++|++|++.|...           .               ...++..|  +.+|++|.++.............++..
T Consensus       112 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~as  191 (287)
T 3rku_A          112 EFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCAS  191 (287)
T ss_dssp             GGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             hcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCchHHHH
Confidence              57999999988321           0               12333344  357999999986654433333344444


Q ss_pred             HHHHHHHHHHHh-hhhcccccc
Q 021831          286 IATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       286 ~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+...+-+.+. .+..+||++
T Consensus       192 Kaa~~~l~~~la~e~~~~gIrv  213 (287)
T 3rku_A          192 KFAVGAFTDSLRKELINTKIRV  213 (287)
T ss_dssp             HHHHHHHHHHHHHHTTTSSCEE
T ss_pred             HHHHHHHHHHHHHHhhhcCCEE
Confidence            444444444443 455667775

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=97.57  E-value=0.00061  Score=60.32  Aligned_cols=133  Identities=20%  Similarity=0.251  Sum_probs=77.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---------Ccc-HH----HHHHcCCceEEeCCChh-H---HHHhc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG---------SKS-ID----RVLAAGAEQAVDYSSKD-I---ELAIK  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~---------~~~-~~----~~~~~g~~~v~~~~~~~-~---~~~~~  235 (307)
                      .|.++||+||+|++|...++.+...|++|+...+         +.+ .+    .++..+...+.|..+.+ .   .+.+.
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~   87 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   87 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence            4789999999999999999999999999988632         221 11    13334544556666542 2   22221


Q ss_pred             ---CCccEEEECCCCh----------hh---------------HHHHHhccc--CCcEEEEeccCcccccccccceechh
Q 021831          236 ---GKFDAVLDTIGAP----------ET---------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLP  285 (307)
Q Consensus       236 ---~~~dvvid~~g~~----------~~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~  285 (307)
                         +++|++|++.|..          ..               ...++..|+  ..|++|.++.............++..
T Consensus        88 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~~~Y~aS  167 (319)
T 1gz6_A           88 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAA  167 (319)
T ss_dssp             HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCCHHHHHH
Confidence               5799999998831          00               123334442  35899999875432222222233333


Q ss_pred             HHHHHHHHHHHh-hhhcccccc
Q 021831          286 IATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       286 ~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ......+-+.+. .+..+||++
T Consensus       168 K~a~~~~~~~la~el~~~gI~v  189 (319)
T 1gz6_A          168 KLGLLGLANTLVIEGRKNNIHC  189 (319)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEE
T ss_pred             HHHHHHHHHHHHHHhcccCEEE
Confidence            344443433333 344567765

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.57  E-value=0.00042  Score=63.37  Aligned_cols=102  Identities=21%  Similarity=0.180  Sum_probs=73.6

Q ss_pred             HHHHHHHHcC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhcCCcc
Q 021831          162 AWRALKCAAR-MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIKGKFD  239 (307)
Q Consensus       162 a~~~l~~~~~-~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d  239 (307)
                      .+.++.+... .-.|++|+|+| .|.+|+.+++.++.+|++|+++.... +...+...|.. +.     ++.+.+ ...|
T Consensus       206 ~~~gi~rat~~~L~GktV~ViG-~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~-v~-----~Leeal-~~AD  277 (435)
T 3gvp_A          206 ILDGLKRTTDMMFGGKQVVVCG-YGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFR-LV-----KLNEVI-RQVD  277 (435)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-EC-----CHHHHT-TTCS
T ss_pred             HHHHHHHhhCceecCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCE-ec-----cHHHHH-hcCC
Confidence            4445543433 45899999999 59999999999999999998875543 33345556643 21     234433 5689


Q ss_pred             EEEECCCChhhHH-HHHhcccCCcEEEEeccCc
Q 021831          240 AVLDTIGAPETER-LGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       240 vvid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~  271 (307)
                      +++.|.|....+. ..+..|++++.++.+|...
T Consensus       278 IVi~atgt~~lI~~e~l~~MK~gailINvgrg~  310 (435)
T 3gvp_A          278 IVITCTGNKNVVTREHLDRMKNSCIVCNMGHSN  310 (435)
T ss_dssp             EEEECSSCSCSBCHHHHHHSCTTEEEEECSSTT
T ss_pred             EEEECCCCcccCCHHHHHhcCCCcEEEEecCCC
Confidence            9999988765554 7889999999999998653

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=97.57  E-value=0.0013  Score=56.70  Aligned_cols=74  Identities=24%  Similarity=0.296  Sum_probs=48.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-Ccc-HHH-HHH---c-CCc-eE--EeCCCh----h-HHHHhc---
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKS-IDR-VLA---A-GAE-QA--VDYSSK----D-IELAIK---  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~-~~~-~~~---~-g~~-~v--~~~~~~----~-~~~~~~---  235 (307)
                      .+.++||+||+|++|.++++.+...|++|+.+.+ +.+ .+. ..+   . +.. ..  .|.++.    + ..+.+.   
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            4678999999999999999999899999999877 432 221 222   1 432 22  243333    2 222221   


Q ss_pred             ---CCccEEEECCCC
Q 021831          236 ---GKFDAVLDTIGA  247 (307)
Q Consensus       236 ---~~~dvvid~~g~  247 (307)
                         +++|++|++.|.
T Consensus        90 ~~~g~id~lv~nAg~  104 (276)
T 1mxh_A           90 RAFGRCDVLVNNASA  104 (276)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HhcCCCCEEEECCCC
Confidence               579999999883

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.56  E-value=0.0011  Score=55.50  Aligned_cols=98  Identities=18%  Similarity=0.177  Sum_probs=64.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCceEEeCCC-hhHHHHhcCCccEEEECCCChh--
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSS-KDIELAIKGKFDAVLDTIGAPE--  249 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~~v~~~~~-~~~~~~~~~~~dvvid~~g~~~--  249 (307)
                      .|.+|||+||+|.+|..+++.+...|.+|+++.++.. ...+...+...++..+- +.+.+.+ +++|+||++.|...  
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~D~vi~~ag~~~~~   98 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAF-ASIDAVVFAAGSGPHT   98 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGG-TTCSEEEECCCCCTTS
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHH-cCCCEEEECCCCCCCC
Confidence            4789999999999999999999999999999987654 34455555512333222 2222222 57999999998531  


Q ss_pred             -----------hHHHHHhccc--CCcEEEEeccCcc
Q 021831          250 -----------TERLGLNFLK--RGGHYMTLHGETA  272 (307)
Q Consensus       250 -----------~~~~~~~~l~--~~G~~v~~g~~~~  272 (307)
                                 ....+++.++  ..+++|.++....
T Consensus        99 ~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~  134 (236)
T 3e8x_A           99 GADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGT  134 (236)
T ss_dssp             CHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred             CccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCC
Confidence                       1223344443  2479999887543

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=97.56  E-value=0.00043  Score=59.62  Aligned_cols=133  Identities=17%  Similarity=0.223  Sum_probs=76.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-H-H----HHHHcCCc-eEE--eCCCh-hHHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-I-D----RVLAAGAE-QAV--DYSSK-DIELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~-~----~~~~~g~~-~v~--~~~~~-~~~~~~~------~~  237 (307)
                      .|.++||+||++++|...++.+...|++|+.+.+... . +    .+++.+.. .++  |..+. +..+.+.      ++
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  107 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGG  107 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            5789999999999999999999899999998877432 1 1    12334432 233  33332 2222221      58


Q ss_pred             ccEEEECCCCh----------hh---------------HHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHH
Q 021831          238 FDAVLDTIGAP----------ET---------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       238 ~dvvid~~g~~----------~~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      +|++|++.|..          +.               ...++..++  ..|++|.++.............++....+..
T Consensus       108 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  187 (271)
T 4iin_A          108 LSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMI  187 (271)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHHHHHHHH
Confidence            99999998841          01               123344443  4589999987554333323333344444444


Q ss_pred             HHHHHHh-hhhcccccc
Q 021831          291 LLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~-~~~~~~i~~  306 (307)
                      .+-+.+. .+..++|++
T Consensus       188 ~~~~~la~e~~~~gi~v  204 (271)
T 4iin_A          188 AMSKSFAYEGALRNIRF  204 (271)
T ss_dssp             HHHHHHHHHHHTTTEEE
T ss_pred             HHHHHHHHHHHHhCcEE
Confidence            4443333 334456654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=97.56  E-value=0.00052  Score=66.16  Aligned_cols=133  Identities=13%  Similarity=0.213  Sum_probs=84.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc----------cHH----HHHHcCCceEEeCCCh-h---HHHHhc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK----------SID----RVLAAGAEQAVDYSSK-D---IELAIK  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~----------~~~----~~~~~g~~~v~~~~~~-~---~~~~~~  235 (307)
                      .|+.+||+||++++|++.++.+...|++|+...+..          ..+    .+++.|...+.+..+. +   +.+.+.
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~   86 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV   86 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence            478899999999999999999999999998874322          222    1233455555565543 2   222222


Q ss_pred             ---CCccEEEECCCCh----------h---------------hHHHHHhccc--CCcEEEEeccCcccccccccceechh
Q 021831          236 ---GKFDAVLDTIGAP----------E---------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLP  285 (307)
Q Consensus       236 ---~~~dvvid~~g~~----------~---------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~  285 (307)
                         +.+|++|++.|..          +               ....++..|+  .+|++|.++.............++..
T Consensus        87 ~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~as  166 (604)
T 2et6_A           87 KNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASA  166 (604)
T ss_dssp             HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHH
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCchHHHHH
Confidence               6899999999841          0               1134555563  46999999876554333334445555


Q ss_pred             HHHHHHHHHHHh-hhhcccccc
Q 021831          286 IATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       286 ~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+...+.+.+. .+.++||+|
T Consensus       167 Kaal~~lt~~la~El~~~gIrV  188 (604)
T 2et6_A          167 KSALLGFAETLAKEGAKYNIKA  188 (604)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHHHHHhCccCeEE
Confidence            555555555555 456778876

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=97.56  E-value=0.001  Score=57.15  Aligned_cols=134  Identities=18%  Similarity=0.193  Sum_probs=76.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HH----HHHcCCc-eE--EeCCChh-HHH---Hhc---C
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR----VLAAGAE-QA--VDYSSKD-IEL---AIK---G  236 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~----~~~~g~~-~v--~~~~~~~-~~~---~~~---~  236 (307)
                      ..+.++||+||++++|.+.++.+...|++|+.+.+....  ..    ....+.. ..  .|.++.+ ..+   .+.   +
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            357889999999999999999999999999888643321  11    1222322 22  2444432 222   221   5


Q ss_pred             CccEEEECCCCh----------hh---------------HHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHH
Q 021831          237 KFDAVLDTIGAP----------ET---------------ERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATT  289 (307)
Q Consensus       237 ~~dvvid~~g~~----------~~---------------~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  289 (307)
                      ++|++|++.|..          ..               ...++..+  +..|++|.++.............++....+.
T Consensus       103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  182 (269)
T 3gk3_A          103 KVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGI  182 (269)
T ss_dssp             CCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHH
T ss_pred             CCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHHHH
Confidence            899999998841          01               12233333  4568999998765433333333344444444


Q ss_pred             HHHHHHHh-hhhcccccc
Q 021831          290 VLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       290 ~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+-+.+. .+..+||++
T Consensus       183 ~~~~~~la~e~~~~gi~v  200 (269)
T 3gk3_A          183 HGFTKTLALETAKRGITV  200 (269)
T ss_dssp             HHHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHhhhcCCEE
Confidence            44444433 444557765

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.55  E-value=0.0013  Score=55.60  Aligned_cols=74  Identities=22%  Similarity=0.354  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHcC---CceEE--eCCChh-HHHHhc------CCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAG---AEQAV--DYSSKD-IELAIK------GKFD  239 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~g---~~~v~--~~~~~~-~~~~~~------~~~d  239 (307)
                      .+.++||+||+|.+|...++.+...|++|+.+.++... +. .+++.   ....+  |..+.+ +.+.+.      +++|
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999999999999988776432 22 23332   12222  333332 222221      5799


Q ss_pred             EEEECCCC
Q 021831          240 AVLDTIGA  247 (307)
Q Consensus       240 vvid~~g~  247 (307)
                      ++|++.|.
T Consensus        85 ~li~~Ag~   92 (251)
T 1zk4_A           85 TLVNNAGI   92 (251)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.55  E-value=0.0018  Score=55.52  Aligned_cols=74  Identities=19%  Similarity=0.355  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H-HHHHcCC---ceEE--eCCChh-HHHHhc------CCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAGA---EQAV--DYSSKD-IELAIK------GKFD  239 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~-~~~~~g~---~~v~--~~~~~~-~~~~~~------~~~d  239 (307)
                      .+.++||+||+|++|...++.+...|++|+.+.+..+. + ...+++.   ...+  |..+.+ +.+.+.      +++|
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   94 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   94 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999998899999988765432 2 2333332   1222  333332 222221      5799


Q ss_pred             EEEECCCC
Q 021831          240 AVLDTIGA  247 (307)
Q Consensus       240 vvid~~g~  247 (307)
                      ++|++.|.
T Consensus        95 ~li~~Ag~  102 (278)
T 2bgk_A           95 IMFGNVGV  102 (278)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999873

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.55  E-value=0.0016  Score=55.25  Aligned_cols=130  Identities=21%  Similarity=0.240  Sum_probs=72.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eEE--eCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QAV--DYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v~--~~~~~~-~~~~~~------~~~  238 (307)
                      .+.++||+||++++|...++.+...|++|+.+.++.+. +.    +++.+.. ..+  |.++.+ ..+.+.      +++
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGI   87 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999988776432 21    2233332 222  333332 222211      589


Q ss_pred             cEEEECCCCh-------------hh---------------HHHHHhcc--cCCcEEEEeccCcccccccccceechhHHH
Q 021831          239 DAVLDTIGAP-------------ET---------------ERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIAT  288 (307)
Q Consensus       239 dvvid~~g~~-------------~~---------------~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  288 (307)
                      |++|++.|..             +.               ...++..+  +.+|++|.++......   ....++....+
T Consensus        88 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---~~~~Y~asK~a  164 (253)
T 3qiv_A           88 DYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL---YSNYYGLAKVG  164 (253)
T ss_dssp             CEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------CCHHH
T ss_pred             CEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC---CCchhHHHHHH
Confidence            9999998751             00               12334444  3568999988765421   11223333344


Q ss_pred             HHHHHHH-Hhhhhcccccc
Q 021831          289 TVLLKKR-MQTWYSYGIGC  306 (307)
Q Consensus       289 ~~~~~~~-~~~~~~~~i~~  306 (307)
                      ...+-+. ...+..+||++
T Consensus       165 ~~~~~~~la~e~~~~gi~v  183 (253)
T 3qiv_A          165 INGLTQQLSRELGGRNIRI  183 (253)
T ss_dssp             HHHHHHHHHHHTTTTTEEE
T ss_pred             HHHHHHHHHHHHhhcCeEE
Confidence            4433333 33445566664

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.53  E-value=0.0018  Score=54.57  Aligned_cols=133  Identities=18%  Similarity=0.211  Sum_probs=78.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCC--ceEE--eC--CCh-hHHH---Hhc---
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGA--EQAV--DY--SSK-DIEL---AIK---  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~--~~v~--~~--~~~-~~~~---~~~---  235 (307)
                      .|.++||+||++++|...++.+...|++|+.+.++... +.    +++.+.  ..++  +.  .+. +..+   .+.   
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~   92 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEF   92 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999999988776432 21    233331  2222  22  222 2222   221   


Q ss_pred             CCccEEEECCCCh-----------hh---------------HHHHHhccc--CCcEEEEeccCcccccccccceechhHH
Q 021831          236 GKFDAVLDTIGAP-----------ET---------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIA  287 (307)
Q Consensus       236 ~~~dvvid~~g~~-----------~~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~  287 (307)
                      +++|++|++.|..           +.               ...++..|+  .+|++|.++.............++....
T Consensus        93 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  172 (247)
T 3i1j_A           93 GRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKF  172 (247)
T ss_dssp             SCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhHHHHH
Confidence            5899999998841           00               123444443  4589999887655433333333444444


Q ss_pred             HHHHHHHHHhhhh-c-ccccc
Q 021831          288 TTVLLKKRMQTWY-S-YGIGC  306 (307)
Q Consensus       288 ~~~~~~~~~~~~~-~-~~i~~  306 (307)
                      +...+-+.+.... . ++|++
T Consensus       173 a~~~~~~~la~e~~~~~~i~v  193 (247)
T 3i1j_A          173 ATEGLMQTLADELEGVTAVRA  193 (247)
T ss_dssp             HHHHHHHHHHHHHTTTSSEEE
T ss_pred             HHHHHHHHHHHHhcCCCCeEE
Confidence            4444444444332 3 56664

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=97.53  E-value=0.00052  Score=59.33  Aligned_cols=133  Identities=19%  Similarity=0.190  Sum_probs=75.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHc---CCceE--EeCCChh-HHHHhc------CCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAA---GAEQA--VDYSSKD-IELAIK------GKFD  239 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~---g~~~v--~~~~~~~-~~~~~~------~~~d  239 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.++.+. +. ..++   +....  .|.++.+ ..+.+.      +++|
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  107 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLD  107 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            47899999999999999999999999999988766432 22 2232   21111  2333332 222221      5799


Q ss_pred             EEEECCCCh----------hh---------------HHHHHhccc--CC----cEEEEeccCcccccccccc-eechhHH
Q 021831          240 AVLDTIGAP----------ET---------------ERLGLNFLK--RG----GHYMTLHGETAALADHYGL-ALGLPIA  287 (307)
Q Consensus       240 vvid~~g~~----------~~---------------~~~~~~~l~--~~----G~~v~~g~~~~~~~~~~~~-~~~~~~~  287 (307)
                      ++|++.|..          +.               ...++..++  ..    |++|.++............ .++....
T Consensus       108 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~Y~asK~  187 (276)
T 2b4q_A          108 ILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKA  187 (276)
T ss_dssp             EEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTTHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccccHHHHH
Confidence            999998831          00               123333332  22    8999998765432222222 3334444


Q ss_pred             HHHHHHHHHh-hhhcccccc
Q 021831          288 TTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       288 ~~~~~~~~~~-~~~~~~i~~  306 (307)
                      +...+-+.+. .+..+||++
T Consensus       188 a~~~~~~~la~e~~~~gI~v  207 (276)
T 2b4q_A          188 ALHQLSRMLAKELVGEHINV  207 (276)
T ss_dssp             HHHHHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHHHhcccCeEE
Confidence            4444443333 445567764

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.52  E-value=0.00074  Score=57.67  Aligned_cols=133  Identities=14%  Similarity=0.160  Sum_probs=75.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHc-----C-CceEE--eCCChh-HHHHhc-----CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAA-----G-AEQAV--DYSSKD-IELAIK-----GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~-----g-~~~v~--~~~~~~-~~~~~~-----~~  237 (307)
                      .+.++||+||+|++|..+++.+...|++|+.+.++.+. +. .+++     + ....+  |.++.+ +.+.+.     -+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            46899999999999999999998899999988776432 21 2222     2 22222  444432 222222     14


Q ss_pred             ccEEEECCCChh----------h---------------HHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHH
Q 021831          238 FDAVLDTIGAPE----------T---------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       238 ~dvvid~~g~~~----------~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      +|++|++.|...          .               ...++..+.  ..|++|.++.............++.......
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  165 (260)
T 2z1n_A           86 ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVI  165 (260)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHTHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHHHHHHH
Confidence            999999988310          0               133444443  3589999987654322222222333333333


Q ss_pred             HHHHHH-hhhhcccccc
Q 021831          291 LLKKRM-QTWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~-~~~~~~~i~~  306 (307)
                      .+-+.+ ..+..+||++
T Consensus       166 ~~~~~la~e~~~~gi~v  182 (260)
T 2z1n_A          166 GVVRTLALELAPHGVTV  182 (260)
T ss_dssp             HHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHhhhCeEE
Confidence            333333 3445567764

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=97.52  E-value=0.00043  Score=66.89  Aligned_cols=133  Identities=18%  Similarity=0.279  Sum_probs=79.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---------C-ccHH----HHHHcCCceEEeCCCh-hHHHHhc---
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG---------S-KSID----RVLAAGAEQAVDYSSK-DIELAIK---  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~---------~-~~~~----~~~~~g~~~v~~~~~~-~~~~~~~---  235 (307)
                      .|.++||+||++++|.+.++.+...|++|+.+.+         + +..+    .+++.+...+.|..+. +..+.+.   
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~   97 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAI   97 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC---
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHH
Confidence            5789999999999999999999899999988754         2 2221    2344565666666654 2333222   


Q ss_pred             ---CCccEEEECCCChh-------------------------hHHHHHhccc--CCcEEEEeccCcccccccccceechh
Q 021831          236 ---GKFDAVLDTIGAPE-------------------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLP  285 (307)
Q Consensus       236 ---~~~dvvid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~  285 (307)
                         +++|++|++.|...                         ....++..|+  ..|++|.++.............++..
T Consensus        98 ~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~~~Y~as  177 (613)
T 3oml_A           98 KAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAA  177 (613)
T ss_dssp             -------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             HHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCChHHHHH
Confidence               57899999988410                         1133444554  35899999876554333334445555


Q ss_pred             HHHHHHHHHHHh-hhhcccccc
Q 021831          286 IATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       286 ~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+...+-+.+. .+..+||+|
T Consensus       178 Kaal~~lt~~la~e~~~~gI~v  199 (613)
T 3oml_A          178 KMGLIGLANTVAIEGARNNVLC  199 (613)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHHHHHhCccCeEE
Confidence            555555555444 445667775

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=97.52  E-value=0.0017  Score=56.54  Aligned_cols=36  Identities=22%  Similarity=0.126  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC-GSK  209 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~-~~~  209 (307)
                      .+.++||+|+++++|.+.++.+...|++|+.+. ++.
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~   44 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSA   44 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCH
Confidence            478999999999999999999999999999887 654

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=97.52  E-value=0.00082  Score=56.82  Aligned_cols=132  Identities=13%  Similarity=0.102  Sum_probs=66.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCceEEeCCChhHHH------Hhc--CCccEEEEC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIEL------AIK--GKFDAVLDT  244 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~------~~~--~~~dvvid~  244 (307)
                      .+.++||+||+|++|.+.++.+.. |++|+.+.+... ...+.+......+..+-.+...      .+.  +++|++|++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~   82 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHA   82 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEEC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEEC
Confidence            368899999999999998887765 889888876543 2333333222333322222111      111  478999999


Q ss_pred             CCChh----------h---------------HHHHHhccc-CCcEEEEeccCcccccccccceechhHHHHHHHHHHHh-
Q 021831          245 IGAPE----------T---------------ERLGLNFLK-RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ-  297 (307)
Q Consensus       245 ~g~~~----------~---------------~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  297 (307)
                      .|...          .               ...++..++ .+|++|.++.............++....+...+-+.+. 
T Consensus        83 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~  162 (245)
T 3e9n_A           83 AAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRK  162 (245)
T ss_dssp             C----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC----------CHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCCCchHHHHHHHHHHHHHHHHHH
Confidence            88521          0               123333443 46999999876554333333333444444443433333 


Q ss_pred             hhhcccccc
Q 021831          298 TWYSYGIGC  306 (307)
Q Consensus       298 ~~~~~~i~~  306 (307)
                      .+..+||++
T Consensus       163 e~~~~gi~v  171 (245)
T 3e9n_A          163 EEANNGIRV  171 (245)
T ss_dssp             HHGGGTCEE
T ss_pred             HhhhcCeEE
Confidence            334556664

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.51  E-value=0.00091  Score=57.71  Aligned_cols=131  Identities=14%  Similarity=0.146  Sum_probs=75.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHcC---CceEE--eCCChh-HHHHhc------CCccEE
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAAG---AEQAV--DYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~g---~~~v~--~~~~~~-~~~~~~------~~~dvv  241 (307)
                      .++||+||+|++|.++++.+...|++|+.+.++.+ .+. ..++.   ....+  |..+.+ ..+.+.      +++|++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            68999999999999999999999999998877643 222 23332   11222  444432 222222      468999


Q ss_pred             EECCCChh-----------h---------------HHHHHhccc--CCc-EEEEeccCcccccccccceechhHHHHHHH
Q 021831          242 LDTIGAPE-----------T---------------ERLGLNFLK--RGG-HYMTLHGETAALADHYGLALGLPIATTVLL  292 (307)
Q Consensus       242 id~~g~~~-----------~---------------~~~~~~~l~--~~G-~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  292 (307)
                      |++.|...           .               ...++..|.  ..| ++|.++.............++....+...+
T Consensus       102 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~asKaa~~~l  181 (272)
T 2nwq_A          102 INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQF  181 (272)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHHHHHHHHH
Confidence            99987421           0               123344442  347 999998765433222222333333344444


Q ss_pred             HHHHh-hhhcccccc
Q 021831          293 KKRMQ-TWYSYGIGC  306 (307)
Q Consensus       293 ~~~~~-~~~~~~i~~  306 (307)
                      -+.+. .+..+||++
T Consensus       182 ~~~la~el~~~gIrv  196 (272)
T 2nwq_A          182 SLNLRCDLQGTGVRV  196 (272)
T ss_dssp             HHHHHTTCTTSCCEE
T ss_pred             HHHHHHHhCccCeEE
Confidence            33333 445567765

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.51  E-value=0.00099  Score=56.71  Aligned_cols=74  Identities=19%  Similarity=0.340  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-Ccc-HHH----HHHcCCc-eEE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKS-IDR----VLAAGAE-QAV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~-~~~----~~~~g~~-~v~--~~~~~~-~~~~~~------~~  237 (307)
                      .+.++||+||+|.+|...++.+...|++|+.+.+ ..+ .+.    +++.+.. .++  |..+.+ +.+.+.      ++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999998889999998877 432 111    2223432 222  333332 222221      57


Q ss_pred             ccEEEECCCC
Q 021831          238 FDAVLDTIGA  247 (307)
Q Consensus       238 ~dvvid~~g~  247 (307)
                      +|++|++.|.
T Consensus        86 id~li~~Ag~   95 (261)
T 1gee_A           86 LDVMINNAGL   95 (261)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=97.50  E-value=0.0015  Score=55.69  Aligned_cols=74  Identities=23%  Similarity=0.363  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eE--EeCCChh-HHHHhc-------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QA--VDYSSKD-IELAIK-------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v--~~~~~~~-~~~~~~-------~~  237 (307)
                      .+.++||+||+|++|...++.+...|++|+.+.++.+. +.    +++.+.. ..  .|..+.+ ..+.+.       ++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   92 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   92 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999999988776432 21    2223432 22  2333332 222221       57


Q ss_pred             ccEEEECCCC
Q 021831          238 FDAVLDTIGA  247 (307)
Q Consensus       238 ~dvvid~~g~  247 (307)
                      +|++|++.|.
T Consensus        93 id~li~~Ag~  102 (266)
T 1xq1_A           93 LDILINNLGA  102 (266)
T ss_dssp             CSEEEEECCC
T ss_pred             CcEEEECCCC
Confidence            8999999884

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=97.50  E-value=0.001  Score=61.09  Aligned_cols=78  Identities=18%  Similarity=0.181  Sum_probs=48.9

Q ss_pred             cCCCCCCEEEEEcCCchHHHH--HHHHHHHcCCEEEEEeCCcc-------------HH----HHHHcCCce-EE--eCCC
Q 021831          170 ARMSEGQRLLVLGGGGAVGFA--AVQFSVASGCHVSATCGSKS-------------ID----RVLAAGAEQ-AV--DYSS  227 (307)
Q Consensus       170 ~~~~~g~~VlI~Ga~g~~G~~--~~~~a~~~G~~Vi~~~~~~~-------------~~----~~~~~g~~~-v~--~~~~  227 (307)
                      .....|.++||+||++++|++  .+......|++|+.+.++..             .+    .+++.|... .+  |..+
T Consensus        55 ~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd  134 (418)
T 4eue_A           55 IGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFS  134 (418)
T ss_dssp             CCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTC
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCC
Confidence            445778999999999999998  55555556999988865321             11    134445432 22  3333


Q ss_pred             hh----HHHHhc---CCccEEEECCCC
Q 021831          228 KD----IELAIK---GKFDAVLDTIGA  247 (307)
Q Consensus       228 ~~----~~~~~~---~~~dvvid~~g~  247 (307)
                      .+    +.+.+.   +++|++|+++|.
T Consensus       135 ~~~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          135 NETKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence            32    222222   679999998875

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=97.49  E-value=0.00058  Score=58.29  Aligned_cols=69  Identities=26%  Similarity=0.361  Sum_probs=47.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEE--eCCChh-HHHHhc------CCccEEEEC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAV--DYSSKD-IELAIK------GKFDAVLDT  244 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~--~~~~~~-~~~~~~------~~~dvvid~  244 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.++.+..  ++   ...+  |.++.+ +.+.+.      +++|++|++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--~~---~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~n   94 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP--EG---FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIAN   94 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC--TT---SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh--cc---ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            368999999999999999999999999999887654311  11   1222  444432 222121      578999999


Q ss_pred             CCC
Q 021831          245 IGA  247 (307)
Q Consensus       245 ~g~  247 (307)
                      .|.
T Consensus        95 Ag~   97 (253)
T 2nm0_A           95 AGV   97 (253)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            874

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=97.49  E-value=0.0015  Score=55.47  Aligned_cols=74  Identities=20%  Similarity=0.416  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H----HHHHcCCc-eEE--eCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAE-QAV--DYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~----~~~~~g~~-~v~--~~~~~~-~~~~~~------~~~  238 (307)
                      .+.++||+||+|.+|...++.+...|++|+.+.++... .    .++..+.. ..+  |..+.+ +.+.+.      +++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   91 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV   91 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999998999999998776432 1    12233432 222  333332 222222      579


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|++.|.
T Consensus        92 d~vi~~Ag~  100 (260)
T 3awd_A           92 DILVACAGI  100 (260)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=97.49  E-value=0.0012  Score=56.46  Aligned_cols=99  Identities=24%  Similarity=0.339  Sum_probs=62.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-Ccc-HHH----HHHcCCc-eE--EeCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKS-IDR----VLAAGAE-QA--VDYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~-~~~----~~~~g~~-~v--~~~~~~~-~~~~~~------~~  237 (307)
                      .+.++||+||+|.+|...++.+...|++|+.+.+ +.+ .+.    +++.+.. ..  .|..+.+ +.+.+.      ++
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   99 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   99 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999998876 332 211    2333433 22  2444432 222222      57


Q ss_pred             ccEEEECCCChh----------h---------------HHHHHhcccCCcEEEEeccCcc
Q 021831          238 FDAVLDTIGAPE----------T---------------ERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       238 ~dvvid~~g~~~----------~---------------~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      +|++|++.|...          .               ...++..++.+|++|.++....
T Consensus       100 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~  159 (274)
T 1ja9_A          100 LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAA  159 (274)
T ss_dssp             EEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred             CCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHh
Confidence            999999987310          0               1222344545689999987544

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=97.48  E-value=0.0011  Score=57.49  Aligned_cols=73  Identities=23%  Similarity=0.394  Sum_probs=48.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc--eEE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE--QAV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~--~v~--~~~~~~-~~~~~~------~~  237 (307)
                      .|.++||+||+|++|...++.+...|++|+.+.++.. .+.    +++.+..  .++  |.++.+ ..+.+.      ++
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  106 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG  106 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999899999999877643 222    2233432  222  333322 222221      58


Q ss_pred             ccEEEEC-CC
Q 021831          238 FDAVLDT-IG  246 (307)
Q Consensus       238 ~dvvid~-~g  246 (307)
                      +|++|++ .|
T Consensus       107 iD~li~naag  116 (286)
T 1xu9_A          107 LDMLILNHIT  116 (286)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999998 44

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=97.48  E-value=0.0009  Score=57.00  Aligned_cols=131  Identities=17%  Similarity=0.176  Sum_probs=76.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCcc-HHH-HHHcCCc-eE--EeCCChh-HHHHhc------CCccE
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKS-IDR-VLAAGAE-QA--VDYSSKD-IELAIK------GKFDA  240 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G--~~Vi~~~~~~~-~~~-~~~~g~~-~v--~~~~~~~-~~~~~~------~~~dv  240 (307)
                      |+++||+||++++|.+.++.+...|  ++|+.+.++++ .+. .++++.. ..  .|.++.+ ..+.+.      +++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            5789999999999999887776664  68887766543 222 3334432 22  2444432 222121      68999


Q ss_pred             EEECCCChh--------------------------hHHHHHhccc-CCcEEEEeccCcccccccccceechhHHHHHHHH
Q 021831          241 VLDTIGAPE--------------------------TERLGLNFLK-RGGHYMTLHGETAALADHYGLALGLPIATTVLLK  293 (307)
Q Consensus       241 vid~~g~~~--------------------------~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  293 (307)
                      +|++.|...                          ....++..|+ .+|++|.++.............++....+...+-
T Consensus        82 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~  161 (254)
T 3kzv_A           82 LVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFA  161 (254)
T ss_dssp             EEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCSSCCSHHHHHHHHHHHHHH
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccCCCCcchHHHHHHHHHHHH
Confidence            999988410                          0123333443 4699999998765443333334444555555555


Q ss_pred             HHHhhhhcccccc
Q 021831          294 KRMQTWYSYGIGC  306 (307)
Q Consensus       294 ~~~~~~~~~~i~~  306 (307)
                      +.+.... ++|++
T Consensus       162 ~~la~e~-~~i~v  173 (254)
T 3kzv_A          162 MTLANEE-RQVKA  173 (254)
T ss_dssp             HHHHHHC-TTSEE
T ss_pred             HHHHhhc-cCcEE
Confidence            5444333 56664

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.47  E-value=0.002  Score=54.85  Aligned_cols=37  Identities=24%  Similarity=0.270  Sum_probs=32.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~  210 (307)
                      .+.++||+||+|++|...++.+...|++|+.+.++..
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~   42 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRA   42 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChH
Confidence            4679999999999999999999889999999877643

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=97.46  E-value=0.00094  Score=56.54  Aligned_cols=74  Identities=19%  Similarity=0.356  Sum_probs=49.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc-eE--EeCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QA--VDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~-~v--~~~~~~~-~~~~~~------~~~  238 (307)
                      .+.++||+||+|.+|...++.+...|++|+.+.++... +.    ++..+.. ..  .|..+.+ +.+.+.      +++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   89 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            47899999999999999999998899999988776432 11    2223432 22  2333332 222221      579


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|++.|.
T Consensus        90 d~vi~~Ag~   98 (255)
T 1fmc_A           90 DILVNNAGG   98 (255)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=97.46  E-value=0.0013  Score=55.02  Aligned_cols=131  Identities=14%  Similarity=0.065  Sum_probs=76.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHcCCc---eEEeCCChh-HHHHhc---CCccEEEECCC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGAE---QAVDYSSKD-IELAIK---GKFDAVLDTIG  246 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~g~~---~v~~~~~~~-~~~~~~---~~~dvvid~~g  246 (307)
                      .++||+||+|++|.+.++.+...|++|+.+.++.+. +. ..+++..   ...|.++.+ ..+.+.   ..+|++|++.|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag   81 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAG   81 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeCC
Confidence            368999999999999999999999999998776542 22 3344322   223444433 222222   35699999988


Q ss_pred             Ch----------h---------------hHHHHHhcccC-CcEEEEeccCcccccccccceechhHHHHHHHHHHHh-hh
Q 021831          247 AP----------E---------------TERLGLNFLKR-GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ-TW  299 (307)
Q Consensus       247 ~~----------~---------------~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  299 (307)
                      ..          +               ....++..+.. ++++|.++.............++....+...+-+.+. .+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~  161 (230)
T 3guy_A           82 SGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLEL  161 (230)
T ss_dssp             CCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCCchhHHHHHHHHHHHHHHHHHH
Confidence            31          0               11234444443 5689988876554333333334444444444444443 34


Q ss_pred             hcccccc
Q 021831          300 YSYGIGC  306 (307)
Q Consensus       300 ~~~~i~~  306 (307)
                      ..+||++
T Consensus       162 ~~~gi~v  168 (230)
T 3guy_A          162 KGKPMKI  168 (230)
T ss_dssp             TTSSCEE
T ss_pred             HhcCeEE
Confidence            4557765

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=97.45  E-value=0.0012  Score=56.30  Aligned_cols=73  Identities=18%  Similarity=0.254  Sum_probs=48.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-H---HHcCCc-eE--EeCCChh-H---HHHh----cCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-V---LAAGAE-QA--VDYSSKD-I---ELAI----KGK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~---~~~g~~-~v--~~~~~~~-~---~~~~----~~~  237 (307)
                      .+.++||+||+|++|...++.+...|++|+.+.++.+ .+. .   +..+.. ..  .|.++.+ +   .+.+    .++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   83 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR   83 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4688999999999999999999999999998876543 221 2   222432 22  2444432 2   2222    257


Q ss_pred             ccEEEECCC
Q 021831          238 FDAVLDTIG  246 (307)
Q Consensus       238 ~dvvid~~g  246 (307)
                      +|++|++.|
T Consensus        84 id~lvnnAg   92 (260)
T 2qq5_A           84 LDVLVNNAY   92 (260)
T ss_dssp             CCEEEECCC
T ss_pred             ceEEEECCc
Confidence            899999995

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.45  E-value=0.0016  Score=56.75  Aligned_cols=74  Identities=23%  Similarity=0.372  Sum_probs=49.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HH---HHHcCCc--eE--EeCCCh-hH----HHHhc---C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAE--QA--VDYSSK-DI----ELAIK---G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~---~~~~g~~--~v--~~~~~~-~~----~~~~~---~  236 (307)
                      .+.++||+||++++|.++++.+...|++|+.+.++...  +.   +++.+..  ..  .|.++. +.    .+.+.   +
T Consensus        11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g   90 (311)
T 3o26_A           11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFG   90 (311)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCC
Confidence            57899999999999999999998999999999876542  11   2222221  22  244443 21    12221   5


Q ss_pred             CccEEEECCCC
Q 021831          237 KFDAVLDTIGA  247 (307)
Q Consensus       237 ~~dvvid~~g~  247 (307)
                      ++|++|++.|.
T Consensus        91 ~iD~lv~nAg~  101 (311)
T 3o26_A           91 KLDILVNNAGV  101 (311)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            89999999984

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=97.44  E-value=0.0019  Score=54.33  Aligned_cols=74  Identities=22%  Similarity=0.366  Sum_probs=47.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCcc-HHH----HHHcCCc-eEE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKS-IDR----VLAAGAE-QAV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~-~~~~~-~~~----~~~~g~~-~v~--~~~~~~-~~~~~~------~~  237 (307)
                      .+.++||+|++|.+|...++.+...|++|+.+ .++.. .+.    ++..+.. ..+  |.++.+ +.+.+.      ++
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            46899999999999999999999999999888 44433 221    2233432 222  333332 222221      57


Q ss_pred             ccEEEECCCC
Q 021831          238 FDAVLDTIGA  247 (307)
Q Consensus       238 ~dvvid~~g~  247 (307)
                      +|++|++.|.
T Consensus        84 ~d~vi~~Ag~   93 (247)
T 2hq1_A           84 IDILVNNAGI   93 (247)
T ss_dssp             CCEEEECC--
T ss_pred             CCEEEECCCC
Confidence            9999999874

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=97.44  E-value=0.0015  Score=54.97  Aligned_cols=73  Identities=14%  Similarity=0.266  Sum_probs=47.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCcc-HHH----HHHcCCc-eE-E--eCCChh-HHHHhc------CC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKS-IDR----VLAAGAE-QA-V--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~-~~~~~-~~~----~~~~g~~-~v-~--~~~~~~-~~~~~~------~~  237 (307)
                      +.++||+||+|.+|...++.+...|++|+.+ .++.. .+.    ++..+.. .. +  |..+.+ ..+.+.      ++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            3589999999999999999999999999887 55432 221    2223432 12 2  444432 222211      57


Q ss_pred             ccEEEECCCC
Q 021831          238 FDAVLDTIGA  247 (307)
Q Consensus       238 ~dvvid~~g~  247 (307)
                      +|++|++.|.
T Consensus        81 ~d~li~~Ag~   90 (245)
T 2ph3_A           81 LDTLVNNAGI   90 (245)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.44  E-value=0.0017  Score=56.00  Aligned_cols=74  Identities=20%  Similarity=0.430  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HH---HcCC---c-eE--EeCCChh-HHHHhc------
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VL---AAGA---E-QA--VDYSSKD-IELAIK------  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~---~~g~---~-~v--~~~~~~~-~~~~~~------  235 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.++.+ .+. ..   +.+.   . ..  .|.++.+ ..+.+.      
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   84 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4688999999999999999999999999999877643 222 22   2232   1 22  2444432 222221      


Q ss_pred             CCccEEEECCCC
Q 021831          236 GKFDAVLDTIGA  247 (307)
Q Consensus       236 ~~~dvvid~~g~  247 (307)
                      +++|++|++.|.
T Consensus        85 g~iD~lv~nAg~   96 (280)
T 1xkq_A           85 GKIDVLVNNAGA   96 (280)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999873

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=97.43  E-value=0.0012  Score=55.86  Aligned_cols=131  Identities=21%  Similarity=0.178  Sum_probs=76.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEeCCccHHHHHHcCCceEEeCCChh-HHHH---hc-CCccEEEECCCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVA-SGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD-IELA---IK-GKFDAVLDTIGA  247 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~-~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~---~~-~~~dvvid~~g~  247 (307)
                      .+.++||+||++++|.+.++.+.. .|++|+...+.+.... .+. .....|.++.+ ..+.   +. +++|++|++.|.
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~-~~~-~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg~   80 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA-ENL-KFIKADLTKQQDITNVLDIIKNVSFDGIFLNAGI   80 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC-TTE-EEEECCTTCHHHHHHHHHHTTTCCEEEEEECCCC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccc-ccc-eEEecCcCCHHHHHHHHHHHHhCCCCEEEECCcc
Confidence            467899999999999998877766 6778888765543110 000 01112333332 2222   22 479999999885


Q ss_pred             h----------h---------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHHHHHHHHHHHh-hhhc
Q 021831          248 P----------E---------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ-TWYS  301 (307)
Q Consensus       248 ~----------~---------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  301 (307)
                      .          +               ....++..++++|++|.++.............++....+...+-+.+. .+..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~  160 (244)
T 4e4y_A           81 LIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAK  160 (244)
T ss_dssp             CCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTBHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             CCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCCchhHHHHHHHHHHHHHHHHHHHH
Confidence            1          0               113344556667999999876554333333344444444444444443 4456


Q ss_pred             ccccc
Q 021831          302 YGIGC  306 (307)
Q Consensus       302 ~~i~~  306 (307)
                      +||++
T Consensus       161 ~gi~v  165 (244)
T 4e4y_A          161 YQIRV  165 (244)
T ss_dssp             GTCEE
T ss_pred             cCeEE
Confidence            67765

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.43  E-value=0.00026  Score=55.69  Aligned_cols=97  Identities=12%  Similarity=0.048  Sum_probs=62.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHH-HcCCceEEeCC--ChhHHHHh-cCCccEEEECC
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVL-AAGAEQAVDYS--SKDIELAI-KGKFDAVLDTI  245 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~-~~g~~~v~~~~--~~~~~~~~-~~~~dvvid~~  245 (307)
                      ...++++|+|+|+ |.+|+.+++.++..|.+|+++.++. +.+.++ ..|.. ++..+  +.+..... ..++|+||.++
T Consensus        15 ~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~-~~~~d~~~~~~l~~~~~~~ad~Vi~~~   92 (155)
T 2g1u_A           15 KKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGF-TVVGDAAEFETLKECGMEKADMVFAFT   92 (155)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSE-EEESCTTSHHHHHTTTGGGCSEEEECS
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCc-EEEecCCCHHHHHHcCcccCCEEEEEe
Confidence            4467899999995 9999999999999999998886654 334444 45554 33332  22222222 14699999999


Q ss_pred             CChhhHHHHHhcccC-C--cEEEEecc
Q 021831          246 GAPETERLGLNFLKR-G--GHYMTLHG  269 (307)
Q Consensus       246 g~~~~~~~~~~~l~~-~--G~~v~~g~  269 (307)
                      +.......+...++. +  .+++....
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~iv~~~~  119 (155)
T 2g1u_A           93 NDDSTNFFISMNARYMFNVENVIARVY  119 (155)
T ss_dssp             SCHHHHHHHHHHHHHTSCCSEEEEECS
T ss_pred             CCcHHHHHHHHHHHHHCCCCeEEEEEC
Confidence            987554555454443 3  45554443

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=97.41  E-value=0.0022  Score=54.88  Aligned_cols=133  Identities=15%  Similarity=0.251  Sum_probs=74.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-Ccc-HH----HHHHcCCc-eEE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKS-ID----RVLAAGAE-QAV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~-~~----~~~~~g~~-~v~--~~~~~~-~~~~~~------~~  237 (307)
                      .+.++||+||++++|...++.+...|++|+...+ +.. .+    .+.+.+.. .++  |.++.+ ..+.+.      ++
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA  104 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4679999999999999999999999999877643 322 11    12233332 222  333332 222221      58


Q ss_pred             ccEEEECCCChh----------hH---------------HHHHhcc---cCCcEEEEeccCcccccccccceechhHHHH
Q 021831          238 FDAVLDTIGAPE----------TE---------------RLGLNFL---KRGGHYMTLHGETAALADHYGLALGLPIATT  289 (307)
Q Consensus       238 ~dvvid~~g~~~----------~~---------------~~~~~~l---~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  289 (307)
                      +|++|++.|...          .+               ..++..+   +.+|++|.++.............++....+.
T Consensus       105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  184 (267)
T 4iiu_A          105 WYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGI  184 (267)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHHHHHH
T ss_pred             ccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHHHHHH
Confidence            999999987410          01               1112222   4679999998765433333333344444444


Q ss_pred             HHHHHHHh-hhhcccccc
Q 021831          290 VLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       290 ~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+-+.+. .+..+||++
T Consensus       185 ~~~~~~la~e~~~~gi~v  202 (267)
T 4iiu_A          185 IGATKALAIELAKRKITV  202 (267)
T ss_dssp             HHHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHHhhcCeEE
Confidence            44444433 444556664

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.40  E-value=0.0013  Score=54.16  Aligned_cols=91  Identities=12%  Similarity=0.171  Sum_probs=61.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeC--CChhHHHHhcCCccEEEECCCCh------
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDY--SSKDIELAIKGKFDAVLDTIGAP------  248 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~--~~~~~~~~~~~~~dvvid~~g~~------  248 (307)
                      +|||+||+|.+|..+++.+...|.+|+++.++.+.......+. .++..  .+.+. +.+ +++|+||++.|..      
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~D~~d~~~-~~~-~~~d~vi~~ag~~~~~~~~   78 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDI-NILQKDIFDLTL-SDL-SDQNVVVDAYGISPDEAEK   78 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSS-EEEECCGGGCCH-HHH-TTCSEEEECCCSSTTTTTS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCC-eEEeccccChhh-hhh-cCCCEEEECCcCCccccch
Confidence            6999999999999999999999999999988754322111233 23332  22222 222 6799999999863      


Q ss_pred             --hhHHHHHhcccC--CcEEEEeccC
Q 021831          249 --ETERLGLNFLKR--GGHYMTLHGE  270 (307)
Q Consensus       249 --~~~~~~~~~l~~--~G~~v~~g~~  270 (307)
                        .....+++.++.  .+++|.++..
T Consensus        79 ~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           79 HVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             HHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             HHHHHHHHHHHHHhcCCceEEEEecc
Confidence              133455666654  4789988764

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=97.37  E-value=0.0014  Score=56.79  Aligned_cols=74  Identities=26%  Similarity=0.355  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc-eE--EeCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE-QA--VDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~-~v--~~~~~~~-~~~~~~------~~~  238 (307)
                      .+.++||+||+|++|...++.+...|++|+.+.++.+ .+.    +++.+.. ..  .|.++.+ +.+.+.      +++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i  122 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV  122 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            3679999999999999999998889999988765432 222    2222432 22  2344432 222221      579


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|++.|.
T Consensus       123 d~li~~Ag~  131 (285)
T 2c07_A          123 DILVNNAGI  131 (285)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=97.37  E-value=0.0011  Score=58.76  Aligned_cols=36  Identities=22%  Similarity=0.126  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC-GSK  209 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~-~~~  209 (307)
                      .+.++||+||++++|.++++.+...|++|+.+. ++.
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~   81 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSA   81 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCH
Confidence            468999999999999999999999999999887 654

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=97.35  E-value=0.0015  Score=54.98  Aligned_cols=73  Identities=25%  Similarity=0.374  Sum_probs=47.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCcc-HHH----HHHcCCc-eE--EeCCChh-HHHHhc------CCc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKS-IDR----VLAAGAE-QA--VDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~-~~~~~-~~~----~~~~g~~-~v--~~~~~~~-~~~~~~------~~~  238 (307)
                      |.++||+||+|.+|...++.+...|++|+.+ .++.. .+.    +++.+.. ..  .|.++.+ +.+.+.      +++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999885 55432 211    2223432 12  2344332 222222      579


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|++.|.
T Consensus        81 d~li~~Ag~   89 (244)
T 1edo_A           81 DVVVNNAGI   89 (244)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=97.34  E-value=0.002  Score=59.88  Aligned_cols=133  Identities=15%  Similarity=0.205  Sum_probs=79.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHH----HHHcCCce-EEeCCChh-HHH---Hhc---CC-ccE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR----VLAAGAEQ-AVDYSSKD-IEL---AIK---GK-FDA  240 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~----~~~~g~~~-v~~~~~~~-~~~---~~~---~~-~dv  240 (307)
                      +|.++||+|++|++|..+++.+...|++|+.+.++...+.    ..+.+... ..|.++.+ ..+   .+.   ++ +|+
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~  291 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDI  291 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSE
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceE
Confidence            5789999999999999999988888999988876543222    33445432 22444432 222   221   44 999


Q ss_pred             EEECCCChh----------h---------------HHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHHHH
Q 021831          241 VLDTIGAPE----------T---------------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLLK  293 (307)
Q Consensus       241 vid~~g~~~----------~---------------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  293 (307)
                      +|++.|...          .               ...+...+.  +.|+||.++.............++....+...+-
T Consensus       292 lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasKaal~~l~  371 (454)
T 3u0b_A          292 LVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLA  371 (454)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred             EEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHHHHHHHHH
Confidence            999988420          0               112222222  6799999987655333333334444444444444


Q ss_pred             HHHh-hhhcccccc
Q 021831          294 KRMQ-TWYSYGIGC  306 (307)
Q Consensus       294 ~~~~-~~~~~~i~~  306 (307)
                      +.+. .+..+||++
T Consensus       372 ~~la~e~~~~gI~v  385 (454)
T 3u0b_A          372 EALAPVLADKGITI  385 (454)
T ss_dssp             HHHHHHHHTTTCEE
T ss_pred             HHHHHHhhhcCcEE
Confidence            4444 445567765

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=97.33  E-value=0.0031  Score=54.09  Aligned_cols=135  Identities=19%  Similarity=0.323  Sum_probs=76.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCcc-HHH----HHHcCCc-eEE--eCCChh-HHHHhc------
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKS-IDR----VLAAGAE-QAV--DYSSKD-IELAIK------  235 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~-~~~~~-~~~----~~~~g~~-~v~--~~~~~~-~~~~~~------  235 (307)
                      ...+.++||+||+|++|.+.++.+...|++|+.+ .++.+ .+.    +++.+.. ..+  |..+.+ ..+.+.      
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            3467899999999999999999999999998776 44432 111    2333432 222  333322 222221      


Q ss_pred             CCccEEEECCCChh-----------h---------------HHHHHhccc-----CCcEEEEeccCccccccc-ccceec
Q 021831          236 GKFDAVLDTIGAPE-----------T---------------ERLGLNFLK-----RGGHYMTLHGETAALADH-YGLALG  283 (307)
Q Consensus       236 ~~~dvvid~~g~~~-----------~---------------~~~~~~~l~-----~~G~~v~~g~~~~~~~~~-~~~~~~  283 (307)
                      +++|++|++.|...           .               ...++..+.     .+|++|.++......... ....++
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~  182 (272)
T 4e3z_A          103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYA  182 (272)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHH
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhH
Confidence            57999999987310           0               122333443     378999998765433222 112234


Q ss_pred             hhHHHHHHHHHHHh-hhhcccccc
Q 021831          284 LPIATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       284 ~~~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ....+...+-+.+. .+..+||++
T Consensus       183 asKaa~~~~~~~la~e~~~~gi~v  206 (272)
T 4e3z_A          183 ASKAAIDTFTIGLAREVAAEGIRV  206 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHcCcEE
Confidence            44444444444433 344557764

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.33  E-value=0.00087  Score=58.54  Aligned_cols=92  Identities=21%  Similarity=0.251  Sum_probs=68.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhH
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE  251 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~  251 (307)
                      -.|++|+|+| .|.+|+.+++.++.+|++|++..+..+ .+.+.++|... ++.  .++.+.+ ...|+|+.+++....-
T Consensus       153 l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~-~~~--~~l~~~l-~~aDvVi~~~p~~~i~  227 (293)
T 3d4o_A          153 IHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEP-FHI--SKAAQEL-RDVDVCINTIPALVVT  227 (293)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEE-EEG--GGHHHHT-TTCSEEEECCSSCCBC
T ss_pred             CCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCee-cCh--hhHHHHh-cCCCEEEECCChHHhC
Confidence            3689999999 599999999999999999988876643 34456677653 222  2343433 5699999999865223


Q ss_pred             HHHHhcccCCcEEEEecc
Q 021831          252 RLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       252 ~~~~~~l~~~G~~v~~g~  269 (307)
                      ...+..+++++.++.++.
T Consensus       228 ~~~l~~mk~~~~lin~ar  245 (293)
T 3d4o_A          228 ANVLAEMPSHTFVIDLAS  245 (293)
T ss_dssp             HHHHHHSCTTCEEEECSS
T ss_pred             HHHHHhcCCCCEEEEecC
Confidence            456778999999999984

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=97.32  E-value=0.00071  Score=57.95  Aligned_cols=71  Identities=18%  Similarity=0.311  Sum_probs=48.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEE--eCCChh-HHHHhc------CCccEEEEC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAV--DYSSKD-IELAIK------GKFDAVLDT  244 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~--~~~~~~-~~~~~~------~~~dvvid~  244 (307)
                      .+.++||+||+|++|.+.++.+...|++|+.+.++.+...  ... ...+  |.++.+ ..+.+.      +++|++|++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--~~~-~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~n  103 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA--DPD-IHTVAGDISKPETADRIVREGIERFGRIDSLVNN  103 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS--STT-EEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc--cCc-eEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEEC
Confidence            4789999999999999999999999999999877543210  011 1222  344432 222121      589999999


Q ss_pred             CCC
Q 021831          245 IGA  247 (307)
Q Consensus       245 ~g~  247 (307)
                      .|.
T Consensus       104 Ag~  106 (260)
T 3un1_A          104 AGV  106 (260)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            874

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=97.32  E-value=0.0021  Score=56.98  Aligned_cols=73  Identities=18%  Similarity=0.367  Sum_probs=48.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC---ccH---HH----HHHcCCc-eE--EeCCCh-hHHHHhc-----
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS---KSI---DR----VLAAGAE-QA--VDYSSK-DIELAIK-----  235 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~---~~~---~~----~~~~g~~-~v--~~~~~~-~~~~~~~-----  235 (307)
                      +.++||+||+|++|.+.++.+...|++|+++.++   .+.   +.    +...+.. ..  .|.++. ++.+.+.     
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~   84 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGE   84 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            6789999999999999999999999999988654   111   11    2223332 22  234433 2222222     


Q ss_pred             -CCccEEEECCCC
Q 021831          236 -GKFDAVLDTIGA  247 (307)
Q Consensus       236 -~~~dvvid~~g~  247 (307)
                       +++|++|++.|.
T Consensus        85 ~g~iD~lVnnAG~   97 (324)
T 3u9l_A           85 DGRIDVLIHNAGH   97 (324)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence             589999999983

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=97.28  E-value=0.0044  Score=53.97  Aligned_cols=73  Identities=22%  Similarity=0.309  Sum_probs=48.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HH---H-----cCCc-eE--EeCCChh-HHHHhc----
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VL---A-----AGAE-QA--VDYSSKD-IELAIK----  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~---~-----~g~~-~v--~~~~~~~-~~~~~~----  235 (307)
                      .+.++||+||+|++|..+++.+...|++|+.+.++... +. .+   .     .+.. ..  .|.++.+ +.+.+.    
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   96 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   96 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence            46899999999999999999998999999988776432 21 11   1     1222 22  2333332 222221    


Q ss_pred             --CCccEEEECCC
Q 021831          236 --GKFDAVLDTIG  246 (307)
Q Consensus       236 --~~~dvvid~~g  246 (307)
                        +++|++|++.|
T Consensus        97 ~~g~id~li~~Ag  109 (303)
T 1yxm_A           97 TFGKINFLVNNGG  109 (303)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence              57999999998

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=97.28  E-value=0.00032  Score=59.70  Aligned_cols=92  Identities=14%  Similarity=0.091  Sum_probs=57.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCCh-hHHHHhc---CCccEEEECCCChh--
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK-DIELAIK---GKFDAVLDTIGAPE--  249 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~---~~~dvvid~~g~~~--  249 (307)
                      .++||+||+|++|..+++.+...|++|+.+.++.....     .....|.++. +..+.+.   +++|++|++.|...  
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----~~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~~~   76 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI-----ADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQT   76 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----CCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc-----cccccCCCCHHHHHHHHHHhCCCCCEEEECCCCCCCc
Confidence            36999999999999999999899999998876543110     0000111111 1222221   46799999988542  


Q ss_pred             ----------------hHHHHHhcccC--CcEEEEeccCcc
Q 021831          250 ----------------TERLGLNFLKR--GGHYMTLHGETA  272 (307)
Q Consensus       250 ----------------~~~~~~~~l~~--~G~~v~~g~~~~  272 (307)
                                      ....++..|+.  .|++|.++....
T Consensus        77 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  117 (257)
T 1fjh_A           77 KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVAS  117 (257)
T ss_dssp             SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred             ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhh
Confidence                            12344555543  389999987644

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=97.27  E-value=0.0029  Score=55.01  Aligned_cols=73  Identities=16%  Similarity=0.359  Sum_probs=48.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHc----CCc-eEE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAA----GAE-QAV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~----g~~-~v~--~~~~~~-~~~~~~------~~  237 (307)
                      .|.++||+||+|++|...++.+...|++|+.+.++.+. +. ..++    +.. ..+  |.++.+ +.+.+.      +.
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  104 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999988776432 21 2221    432 222  333332 222211      57


Q ss_pred             ccEEEECCC
Q 021831          238 FDAVLDTIG  246 (307)
Q Consensus       238 ~dvvid~~g  246 (307)
                      +|++|++.|
T Consensus       105 id~li~~Ag  113 (302)
T 1w6u_A          105 PNIVINNAA  113 (302)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999988

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.26  E-value=0.0015  Score=52.55  Aligned_cols=95  Identities=18%  Similarity=0.146  Sum_probs=65.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCcc-HHHHHHcCCceEE-eCCChhHHHHh--cCCccEEEECCCChh
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKS-IDRVLAAGAEQAV-DYSSKDIELAI--KGKFDAVLDTIGAPE  249 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~~~-~~~~~~~g~~~v~-~~~~~~~~~~~--~~~~dvvid~~g~~~  249 (307)
                      +++|+|+| .|.+|+.+++.++.. |.+|+++.++.+ .+.+++.|...+. |..+.+.....  ..++|+||.++++..
T Consensus        39 ~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~~  117 (183)
T 3c85_A           39 HAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHHQ  117 (183)
T ss_dssp             TCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSHH
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCChH
Confidence            67899999 599999999999998 999988866543 4556777776443 44444443443  257999999999864


Q ss_pred             hHHHH---HhcccCCcEEEEeccC
Q 021831          250 TERLG---LNFLKRGGHYMTLHGE  270 (307)
Q Consensus       250 ~~~~~---~~~l~~~G~~v~~g~~  270 (307)
                      ....+   ++.+.+..+++.....
T Consensus       118 ~~~~~~~~~~~~~~~~~ii~~~~~  141 (183)
T 3c85_A          118 GNQTALEQLQRRNYKGQIAAIAEY  141 (183)
T ss_dssp             HHHHHHHHHHHTTCCSEEEEEESS
T ss_pred             HHHHHHHHHHHHCCCCEEEEEECC
Confidence            43333   3444556677765543

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.25  E-value=0.00089  Score=61.39  Aligned_cols=102  Identities=20%  Similarity=0.135  Sum_probs=72.1

Q ss_pred             HHHHHHHHc-CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhcCCcc
Q 021831          162 AWRALKCAA-RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIKGKFD  239 (307)
Q Consensus       162 a~~~l~~~~-~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d  239 (307)
                      .+.++.+.. ..-.|++|+|+| .|.+|+.+++.++.+|++|++..... +...+...|.. +.     ++.+.+ ...|
T Consensus       233 lvdgI~Ratg~~L~GKTVgVIG-~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~-vv-----~LeElL-~~AD  304 (464)
T 3n58_A          233 LVDGIRRGTDVMMAGKVAVVCG-YGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFE-VV-----TLDDAA-STAD  304 (464)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCE-EC-----CHHHHG-GGCS
T ss_pred             HHHHHHHhcCCcccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCce-ec-----cHHHHH-hhCC
Confidence            344444333 345799999999 59999999999999999999885433 22334455653 21     233333 4589


Q ss_pred             EEEECCCChhhH-HHHHhcccCCcEEEEeccCc
Q 021831          240 AVLDTIGAPETE-RLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       240 vvid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +|+.++|+...+ ...+..|++++.++.+|-..
T Consensus       305 IVv~atgt~~lI~~e~l~~MK~GAILINvGRgd  337 (464)
T 3n58_A          305 IVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFD  337 (464)
T ss_dssp             EEEECCSSSSSBCHHHHHHSCTTEEEEECSSST
T ss_pred             EEEECCCCccccCHHHHhcCCCCeEEEEcCCCC
Confidence            999999876443 57788999999999998543

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.24  E-value=0.00096  Score=55.25  Aligned_cols=94  Identities=13%  Similarity=0.141  Sum_probs=61.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEE--eCCC-hhHHHHhcCCccEEEECCCChh----
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAV--DYSS-KDIELAIKGKFDAVLDTIGAPE----  249 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~--~~~~-~~~~~~~~~~~dvvid~~g~~~----  249 (307)
                      +|||+||+|.+|..+++.+...|.+|+++.++.....  .+....++  |..+ .+.......++|+||+++|...    
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~~~   79 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVP--QYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGKSLL   79 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSC--CCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTSSCC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchh--hcCCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCCCcE
Confidence            6999999999999999999999999999987654211  11222233  3333 2222223367999999998531    


Q ss_pred             -----hHHHHHhcccCC--cEEEEeccCcc
Q 021831          250 -----TERLGLNFLKRG--GHYMTLHGETA  272 (307)
Q Consensus       250 -----~~~~~~~~l~~~--G~~v~~g~~~~  272 (307)
                           ....+++.++..  +++|.++....
T Consensus        80 ~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~  109 (219)
T 3dqp_A           80 KVDLYGAVKLMQAAEKAEVKRFILLSTIFS  109 (219)
T ss_dssp             CCCCHHHHHHHHHHHHTTCCEEEEECCTTT
T ss_pred             eEeHHHHHHHHHHHHHhCCCEEEEECcccc
Confidence                 233444444432  58999887543

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=97.23  E-value=0.0039  Score=53.13  Aligned_cols=73  Identities=21%  Similarity=0.320  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HHHHH----cCCc-eE--EeCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLA----AGAE-QA--VDYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~~~~----~g~~-~v--~~~~~~~-~~~~~~------~~  237 (307)
                      .+.++||+||++++|.+.++.+...|++|+.+.+....  +.+.+    .+.. .+  .|.++.+ +.+.+.      ++
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            36789999999999999999999999999988654332  22222    1211 22  2444432 222221      58


Q ss_pred             ccEEEECCC
Q 021831          238 FDAVLDTIG  246 (307)
Q Consensus       238 ~dvvid~~g  246 (307)
                      +|++|++.|
T Consensus        86 id~lv~~Ag   94 (264)
T 3i4f_A           86 IDFLINNAG   94 (264)
T ss_dssp             CCEEECCCC
T ss_pred             CCEEEECCc
Confidence            999999999

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=97.22  E-value=0.0033  Score=53.44  Aligned_cols=74  Identities=23%  Similarity=0.407  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cH-HHHH----HcCCc-eEE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SI-DRVL----AAGAE-QAV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~-~~~~----~~g~~-~v~--~~~~~~-~~~~~~------~~  237 (307)
                      .+.++||+||+|.+|..+++.+...|++|+.+.++. +. ..++    +.+.. ..+  |..+.+ +.+.+.      +.
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   92 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   92 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            467899999999999999999988999999987743 22 1122    22332 222  444432 222221      57


Q ss_pred             ccEEEECCCC
Q 021831          238 FDAVLDTIGA  247 (307)
Q Consensus       238 ~dvvid~~g~  247 (307)
                      +|++|++.|.
T Consensus        93 id~li~~Ag~  102 (265)
T 1h5q_A           93 ISGLIANAGV  102 (265)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999874

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.22  E-value=0.0021  Score=53.89  Aligned_cols=69  Identities=22%  Similarity=0.184  Sum_probs=46.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChh-HHHHhc-----CCccEEEECCCC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD-IELAIK-----GKFDAVLDTIGA  247 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~-----~~~dvvid~~g~  247 (307)
                      +.++||+||+|.+|...++.+...|++|+.+.++.+.   .+. .....|..+.+ +.+.+.     +++|++|++.|.
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~---~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag~   76 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG---EDL-IYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGV   76 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS---SSS-EEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCccc---cce-EEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcccc
Confidence            5789999999999999999888889999998776541   111 01112333332 222221     479999999873

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.22  E-value=0.0038  Score=53.18  Aligned_cols=98  Identities=19%  Similarity=0.191  Sum_probs=62.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH-cCCEEEEEeCCccH-HH----HHHcCC-ceEE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVA-SGCHVSATCGSKSI-DR----VLAAGA-EQAV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~-~G~~Vi~~~~~~~~-~~----~~~~g~-~~v~--~~~~~~-~~~~~~------~~  237 (307)
                      .+.++||+||+|.+|..+++.+.. .|++|+.+.+..+. ..    ++..+. ...+  |..+.+ +.+.+.      ++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            578999999999999999888887 89999998776432 11    222232 2223  333322 222221      57


Q ss_pred             ccEEEECCCCh----------h---------------hHHHHHhcccCCcEEEEeccCc
Q 021831          238 FDAVLDTIGAP----------E---------------TERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       238 ~dvvid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +|++|++.|..          .               ....++..++++|++|.++...
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~  141 (276)
T 1wma_A           83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIM  141 (276)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHH
T ss_pred             CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChh
Confidence            99999998742          1               1123445555678999998643

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=97.21  E-value=0.0047  Score=51.86  Aligned_cols=73  Identities=19%  Similarity=0.330  Sum_probs=47.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC-------EEEEEeCCcc-HHH-HHH---cCCc-eEE--eCCChh-HHHHhc---
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGC-------HVSATCGSKS-IDR-VLA---AGAE-QAV--DYSSKD-IELAIK---  235 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~-------~Vi~~~~~~~-~~~-~~~---~g~~-~v~--~~~~~~-~~~~~~---  235 (307)
                      +.++||+||+|++|...++.+...|+       +|+.+.++.. .+. ..+   .+.. ..+  |.++.+ +.+.+.   
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            56899999999999999988888899       8988877543 222 222   2322 222  333332 222222   


Q ss_pred             ---CCccEEEECCCC
Q 021831          236 ---GKFDAVLDTIGA  247 (307)
Q Consensus       236 ---~~~dvvid~~g~  247 (307)
                         +++|++|++.|.
T Consensus        82 ~~~g~id~li~~Ag~   96 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGV   96 (244)
T ss_dssp             HHTSCCSEEEECCCC
T ss_pred             HhCCCCCEEEEcCCc
Confidence               579999999873

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.20  E-value=0.0033  Score=51.96  Aligned_cols=91  Identities=21%  Similarity=0.218  Sum_probs=60.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHH-HHHcCCceEE--eCCChhHHHHhcCCccEEEECCCCh-----
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR-VLAAGAEQAV--DYSSKDIELAIKGKFDAVLDTIGAP-----  248 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~-~~~~g~~~v~--~~~~~~~~~~~~~~~dvvid~~g~~-----  248 (307)
                      +|||+||+|.+|..+++.+...|.+|+++.++..... +...+. .++  |..+.+. + ..+++|+||++.|..     
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~D~~d~~~-~-~~~~~d~vi~~ag~~~~~~~   78 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATV-ATLVKEPLVLTE-A-DLDSVDAVVDALSVPWGSGR   78 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTS-EEEECCGGGCCH-H-HHTTCSEEEECCCCCTTSSC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCc-eEEecccccccH-h-hcccCCEEEECCccCCCcch
Confidence            6999999999999999999999999999987654322 222233 233  3333223 2 236799999999862     


Q ss_pred             -----hhHHHHHhccc-CCcEEEEeccC
Q 021831          249 -----ETERLGLNFLK-RGGHYMTLHGE  270 (307)
Q Consensus       249 -----~~~~~~~~~l~-~~G~~v~~g~~  270 (307)
                           .....+++.++ .++++|.++..
T Consensus        79 ~~~n~~~~~~l~~a~~~~~~~~v~~SS~  106 (224)
T 3h2s_A           79 GYLHLDFATHLVSLLRNSDTLAVFILGS  106 (224)
T ss_dssp             THHHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred             hhHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence                 13345555554 45799998643

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=97.19  E-value=0.0041  Score=52.40  Aligned_cols=73  Identities=22%  Similarity=0.307  Sum_probs=48.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHc----CCc-eEE--eCCChh-HHHHhc------CCc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAA----GAE-QAV--DYSSKD-IELAIK------GKF  238 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~----g~~-~v~--~~~~~~-~~~~~~------~~~  238 (307)
                      +.++||+||+|++|...+..+...|++|+.+.++.. .+. ..++    +.. ..+  |..+.+ +.+.+.      +++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999999899999998877643 222 2222    221 222  333332 222222      579


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|++.|.
T Consensus        82 d~li~~Ag~   90 (250)
T 2cfc_A           82 DVLVNNAGI   90 (250)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=97.19  E-value=0.0031  Score=55.44  Aligned_cols=34  Identities=24%  Similarity=0.326  Sum_probs=30.2

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeC
Q 021831          174 EGQRLLVLGG--GGAVGFAAVQFSVASGCHVSATCG  207 (307)
Q Consensus       174 ~g~~VlI~Ga--~g~~G~~~~~~a~~~G~~Vi~~~~  207 (307)
                      .|.++||+||  ++++|.++++.+...|++|+.+.+
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r   43 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTW   43 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEec
Confidence            4789999998  799999999999899999988864

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.15  E-value=0.0018  Score=56.69  Aligned_cols=93  Identities=18%  Similarity=0.260  Sum_probs=68.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhH
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE  251 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~  251 (307)
                      -.|.+|+|+|+ |.+|+.+++.++.+|++|++..+..+ .+.+.++|.. +++.  .++.+.+ .+.|+|+.+++....-
T Consensus       155 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~-~~~~--~~l~~~l-~~aDvVi~~~p~~~i~  229 (300)
T 2rir_A          155 IHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITEMGLV-PFHT--DELKEHV-KDIDICINTIPSMILN  229 (300)
T ss_dssp             STTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCE-EEEG--GGHHHHS-TTCSEEEECCSSCCBC
T ss_pred             CCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCe-EEch--hhHHHHh-hCCCEEEECCChhhhC
Confidence            36899999995 99999999999999999988876543 3335556654 3332  2344433 5699999999875223


Q ss_pred             HHHHhcccCCcEEEEeccC
Q 021831          252 RLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       252 ~~~~~~l~~~G~~v~~g~~  270 (307)
                      ...+..+++++.++.++..
T Consensus       230 ~~~~~~mk~g~~lin~a~g  248 (300)
T 2rir_A          230 QTVLSSMTPKTLILDLASR  248 (300)
T ss_dssp             HHHHTTSCTTCEEEECSST
T ss_pred             HHHHHhCCCCCEEEEEeCC
Confidence            4567889999999999864

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=97.14  E-value=0.0022  Score=56.56  Aligned_cols=34  Identities=24%  Similarity=0.325  Sum_probs=30.0

Q ss_pred             CCCEEEEEcC--CchHHHHHHHHHHHcCCEEEEEeC
Q 021831          174 EGQRLLVLGG--GGAVGFAAVQFSVASGCHVSATCG  207 (307)
Q Consensus       174 ~g~~VlI~Ga--~g~~G~~~~~~a~~~G~~Vi~~~~  207 (307)
                      .|.++||+||  ++++|.+.++.+...|++|+.+.+
T Consensus         8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r   43 (319)
T 2ptg_A            8 RGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTW   43 (319)
T ss_dssp             TTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEec
Confidence            4788999998  899999999999899999988764

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.11  E-value=0.0038  Score=53.21  Aligned_cols=75  Identities=13%  Similarity=0.263  Sum_probs=48.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcC---CEEEEEeCCcc-HHHHH---HcCCc-eEE--eCCCh-hHHHHhc------
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASG---CHVSATCGSKS-IDRVL---AAGAE-QAV--DYSSK-DIELAIK------  235 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G---~~Vi~~~~~~~-~~~~~---~~g~~-~v~--~~~~~-~~~~~~~------  235 (307)
                      -.+.++||+||+|.+|...++.+...|   ++|+.+.++.. .+.++   +.+.. .++  |.++. ++.+.+.      
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   98 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   98 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence            356899999999999999999999899   89999876543 22222   22322 222  33332 2222222      


Q ss_pred             C--CccEEEECCCC
Q 021831          236 G--KFDAVLDTIGA  247 (307)
Q Consensus       236 ~--~~dvvid~~g~  247 (307)
                      +  ++|++|++.|.
T Consensus        99 g~~~id~li~~Ag~  112 (267)
T 1sny_A           99 KDQGLNVLFNNAGI  112 (267)
T ss_dssp             GGGCCSEEEECCCC
T ss_pred             CCCCccEEEECCCc
Confidence            3  69999999874

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=97.11  E-value=0.0037  Score=52.56  Aligned_cols=74  Identities=24%  Similarity=0.321  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHH-H---H-cCCc-eEE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRV-L---A-AGAE-QAV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~-~---~-~g~~-~v~--~~~~~~-~~~~~~------~~  237 (307)
                      .+.++||+||+|.+|...++.+...|++|+.+.++.. .+.+ .   + .+.. ..+  |..+.+ +.+.+.      ++
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG   85 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            4688999999999999999999889999999877643 2221 1   1 2432 222  333332 222222      57


Q ss_pred             ccEEEECCCC
Q 021831          238 FDAVLDTIGA  247 (307)
Q Consensus       238 ~dvvid~~g~  247 (307)
                      +|++|++.|.
T Consensus        86 ~d~vi~~Ag~   95 (248)
T 2pnf_A           86 IDILVNNAGI   95 (248)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.11  E-value=0.0035  Score=51.94  Aligned_cols=94  Identities=18%  Similarity=0.234  Sum_probs=60.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHc-CCceEE--eCCChhHHHHhcCCccEEEECCCCh----
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAA-GAEQAV--DYSSKDIELAIKGKFDAVLDTIGAP----  248 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-g~~~v~--~~~~~~~~~~~~~~~dvvid~~g~~----  248 (307)
                      .+|||+||+|.+|..+++.+...|.+|+++.++.....  .+ ....++  |..+.+..+....++|+||.+.|..    
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~   82 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIK--IENEHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNNP   82 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCC--CCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-----
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccch--hccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCCh
Confidence            58999999999999999999999999999987654211  11 111222  3333332222235799999998753    


Q ss_pred             -------hhHHHHHhcccCC--cEEEEeccCc
Q 021831          249 -------ETERLGLNFLKRG--GHYMTLHGET  271 (307)
Q Consensus       249 -------~~~~~~~~~l~~~--G~~v~~g~~~  271 (307)
                             .....+++.++..  +++|.++...
T Consensus        83 ~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  114 (227)
T 3dhn_A           83 DIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG  114 (227)
T ss_dssp             -CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence                   1233444555433  4899888654

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=97.09  E-value=0.0016  Score=57.78  Aligned_cols=132  Identities=11%  Similarity=0.075  Sum_probs=77.7

Q ss_pred             CCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCccH----------HH----HHHcCCc----eEE--eCCC---h-
Q 021831          175 GQRLLVLGGGG--AVGFAAVQFSVASGCHVSATCGSKSI----------DR----VLAAGAE----QAV--DYSS---K-  228 (307)
Q Consensus       175 g~~VlI~Ga~g--~~G~~~~~~a~~~G~~Vi~~~~~~~~----------~~----~~~~g~~----~v~--~~~~---~-  228 (307)
                      ++++||+|+++  ++|.+.++.+...|++|+.+.+....          +.    ....+..    .++  |...   + 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            67899999864  99999999988999999877544310          00    0000111    111  1111   1 


Q ss_pred             -----------------h---HHHHhc---CCccEEEECCCCh------------h---------------hHHHHHhcc
Q 021831          229 -----------------D---IELAIK---GKFDAVLDTIGAP------------E---------------TERLGLNFL  258 (307)
Q Consensus       229 -----------------~---~~~~~~---~~~dvvid~~g~~------------~---------------~~~~~~~~l  258 (307)
                                       +   +.+.+.   +++|++|++.|..            .               ....++..|
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m  161 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                             2   222222   6899999998731            0               124566677


Q ss_pred             cCCcEEEEeccCcccccccccc-eechhHHHHHHHHHHHhhh-hc-ccccc
Q 021831          259 KRGGHYMTLHGETAALADHYGL-ALGLPIATTVLLKKRMQTW-YS-YGIGC  306 (307)
Q Consensus       259 ~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~-~~i~~  306 (307)
                      +.+|++|.++............ .++....+...+-+.+... .+ +||++
T Consensus       162 ~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~v  212 (329)
T 3lt0_A          162 KPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRI  212 (329)
T ss_dssp             EEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred             hhCCeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEE
Confidence            7789999999765543333332 4555555565555555543 44 57775

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.09  E-value=0.0016  Score=60.47  Aligned_cols=98  Identities=16%  Similarity=0.129  Sum_probs=68.8

Q ss_pred             HHHHHcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhcCCccEEE
Q 021831          165 ALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVL  242 (307)
Q Consensus       165 ~l~~~~~~-~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvi  242 (307)
                      ++.+.... -.|++++|+|+ |++|+.+++.++..|++|+++.+.. +...+...+.+ +.+     . +.....+|+++
T Consensus       254 gi~r~tg~~L~GKtVvVtGa-GgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~d-v~~-----l-ee~~~~aDvVi  325 (488)
T 3ond_A          254 GLMRATDVMIAGKVAVVAGY-GDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQ-VLT-----L-EDVVSEADIFV  325 (488)
T ss_dssp             HHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECC-----G-GGTTTTCSEEE
T ss_pred             HHHHHcCCcccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCc-cCC-----H-HHHHHhcCEEE
Confidence            33333343 47999999996 7999999999999999998875543 33344555542 211     1 11224699999


Q ss_pred             ECCCChhhH-HHHHhcccCCcEEEEeccC
Q 021831          243 DTIGAPETE-RLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       243 d~~g~~~~~-~~~~~~l~~~G~~v~~g~~  270 (307)
                      ++.|....+ ...+..+++++.++.+|..
T Consensus       326 ~atG~~~vl~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          326 TTTGNKDIIMLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             ECSSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred             eCCCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence            999976444 3478889999999998864

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.07  E-value=0.0032  Score=52.06  Aligned_cols=97  Identities=7%  Similarity=-0.001  Sum_probs=62.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHH-HcCCEEEEEeCCcc-H-HHHHHcCC-ceEE--eCCChhHHHHhcCCccEEEECCCChh
Q 021831          176 QRLLVLGGGGAVGFAAVQFSV-ASGCHVSATCGSKS-I-DRVLAAGA-EQAV--DYSSKDIELAIKGKFDAVLDTIGAPE  249 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~-~~G~~Vi~~~~~~~-~-~~~~~~g~-~~v~--~~~~~~~~~~~~~~~dvvid~~g~~~  249 (307)
                      .+|||+||+|.+|..+++.+. ..|++|+++.++.+ . ..+...+. ..++  |..+.+..+....++|++|++.|...
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~n   85 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMESG   85 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCCH
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCCC
Confidence            469999999999999988887 89999999987644 2 22211222 2233  34443322333367999999998631


Q ss_pred             -hHHHHHhcccC--CcEEEEeccCcc
Q 021831          250 -TERLGLNFLKR--GGHYMTLHGETA  272 (307)
Q Consensus       250 -~~~~~~~~l~~--~G~~v~~g~~~~  272 (307)
                       ....++..++.  .|++|.++....
T Consensus        86 ~~~~~~~~~~~~~~~~~iv~iSs~~~  111 (221)
T 3r6d_A           86 SDMASIVKALSRXNIRRVIGVSMAGL  111 (221)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEEETTT
T ss_pred             hhHHHHHHHHHhcCCCeEEEEeecee
Confidence             13445555543  368998886543

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=97.05  E-value=0.0039  Score=54.21  Aligned_cols=34  Identities=21%  Similarity=0.338  Sum_probs=30.0

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeC
Q 021831          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCG  207 (307)
Q Consensus       174 ~g~~VlI~Ga~--g~~G~~~~~~a~~~G~~Vi~~~~  207 (307)
                      .|.++||+||+  +++|.+.++.+...|++|+.+.+
T Consensus         7 ~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r   42 (297)
T 1d7o_A            7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTW   42 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeec
Confidence            47889999998  99999999988889999988753

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=97.04  E-value=0.0035  Score=55.57  Aligned_cols=132  Identities=11%  Similarity=0.120  Sum_probs=72.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccH----HHHHHc------CCc-eEE--eCCChh-HHHHhc----
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSI----DRVLAA------GAE-QAV--DYSSKD-IELAIK----  235 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~----~~~~~~------g~~-~v~--~~~~~~-~~~~~~----  235 (307)
                      +.++||+|++|++|.+++..+...|++|+.+.+. ++.    ..++..      +.. .++  |.++.+ +.+.+.    
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            5789999999999999999999999987666432 221    122222      121 222  444432 222222    


Q ss_pred             CCccEEEECCCCh----------hh---------------HHHHHhcc--cCCcEEEEeccCcccccccccceechhHHH
Q 021831          236 GKFDAVLDTIGAP----------ET---------------ERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIAT  288 (307)
Q Consensus       236 ~~~dvvid~~g~~----------~~---------------~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  288 (307)
                      +.+|++|++.|..          +.               ...++..|  +..|++|.++.............++.....
T Consensus        82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~aSK~a  161 (327)
T 1jtv_A           82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFA  161 (327)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHHHHHH
Confidence            4699999998731          00               12233334  246899999876543222222223333333


Q ss_pred             HHHHHHHHh-hhhcccccc
Q 021831          289 TVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       289 ~~~~~~~~~-~~~~~~i~~  306 (307)
                      ...+-..+. .+..+||++
T Consensus       162 ~~~~~~~la~el~~~gI~v  180 (327)
T 1jtv_A          162 LEGLCESLAVLLLPFGVHL  180 (327)
T ss_dssp             HHHHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHHhhhcCcEE
Confidence            333333333 344567765

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.02  E-value=0.006  Score=51.12  Aligned_cols=73  Identities=15%  Similarity=0.294  Sum_probs=49.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCcc-HHHHHHc-CCc-eEE--eCCChh-HHHHhc------C--Cc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKS-IDRVLAA-GAE-QAV--DYSSKD-IELAIK------G--KF  238 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G--~~Vi~~~~~~~-~~~~~~~-g~~-~v~--~~~~~~-~~~~~~------~--~~  238 (307)
                      +.++||+||+|.+|..+++.+...|  ++|+.+.++.. .+.+.++ +.. ..+  |..+.+ +.+.+.      +  ++
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~i   82 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCC
Confidence            5789999999999999999999999  89999877543 3334443 221 222  333332 222221      3  79


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|++.|.
T Consensus        83 d~li~~Ag~   91 (250)
T 1yo6_A           83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCcc
Confidence            999999874

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=97.01  E-value=0.007  Score=51.08  Aligned_cols=74  Identities=22%  Similarity=0.480  Sum_probs=49.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-c-cHHH----HHHcCCc-eEE--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-K-SIDR----VLAAGAE-QAV--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~-~~~~----~~~~g~~-~v~--~~~~~~-~~~~~~------~~  237 (307)
                      .+.++||+||+|.+|...++.+...|++|+.+.+. . +.+.    ++..+.. ..+  |..+.+ +.+.+.      ++
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG   85 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46799999999999999999998899999988765 3 3222    2222332 222  333332 222222      57


Q ss_pred             ccEEEECCCC
Q 021831          238 FDAVLDTIGA  247 (307)
Q Consensus       238 ~dvvid~~g~  247 (307)
                      +|++|++.|.
T Consensus        86 id~vi~~Ag~   95 (258)
T 3afn_B           86 IDVLINNAGG   95 (258)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=97.00  E-value=0.0065  Score=52.18  Aligned_cols=73  Identities=23%  Similarity=0.390  Sum_probs=48.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc-eEE--eCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE-QAV--DYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~-~v~--~~~~~~-~~~~~~------~~~  238 (307)
                      .+.++||+||+|++|...+..+...|++|+.+.+... .+.    ++..+.. ..+  |..+.+ +.+.+.      +.+
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i  112 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTI  112 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            4789999999999999999988888999998876543 222    2223432 222  333332 222221      579


Q ss_pred             cEEEECCC
Q 021831          239 DAVLDTIG  246 (307)
Q Consensus       239 dvvid~~g  246 (307)
                      |++|++.|
T Consensus       113 d~li~~Ag  120 (279)
T 3ctm_A          113 DVFVANAG  120 (279)
T ss_dssp             SEEEECGG
T ss_pred             CEEEECCc
Confidence            99999976

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.00  E-value=0.006  Score=46.83  Aligned_cols=96  Identities=14%  Similarity=0.048  Sum_probs=66.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEE-eCCChhHHHHhc-CCccEEEECCCChhhH
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAV-DYSSKDIELAIK-GKFDAVLDTIGAPETE  251 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~-~~~~~~~~~~~~-~~~dvvid~~g~~~~~  251 (307)
                      .++|+|.|. |.+|..+++.++..|.+|+++.+.. +.+.+++.|...+. |..+.+..+... .++|++|-++++....
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n   85 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEA   85 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHH
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHH
Confidence            478999995 9999999999999999999986654 44556777775432 333344433332 4799999999986322


Q ss_pred             ---HHHHhcccCCcEEEEeccCc
Q 021831          252 ---RLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       252 ---~~~~~~l~~~G~~v~~g~~~  271 (307)
                         ...++.+.+..+++......
T Consensus        86 ~~~~~~a~~~~~~~~iiar~~~~  108 (140)
T 3fwz_A           86 GEIVASARAKNPDIEIIARAHYD  108 (140)
T ss_dssp             HHHHHHHHHHCSSSEEEEEESSH
T ss_pred             HHHHHHHHHHCCCCeEEEEECCH
Confidence               23445566777777655443

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=96.97  E-value=0.008  Score=51.21  Aligned_cols=74  Identities=24%  Similarity=0.370  Sum_probs=48.3

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCcc-H--HHHH----HcCCce---EEeCCChh-HH---HHhc--
Q 021831          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKS-I--DRVL----AAGAEQ---AVDYSSKD-IE---LAIK--  235 (307)
Q Consensus       174 ~g~~VlI~Ga~--g~~G~~~~~~a~~~G~~Vi~~~~~~~-~--~~~~----~~g~~~---v~~~~~~~-~~---~~~~--  235 (307)
                      .|.++||+||+  +++|...++.+...|++|+.+.+... .  +.++    ..+...   ..|.++.+ ..   +.+.  
T Consensus        19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (267)
T 3gdg_A           19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD   98 (267)
T ss_dssp             TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence            47899999998  89999999999899999988865432 1  2222    224321   12333332 22   2221  


Q ss_pred             -CCccEEEECCCC
Q 021831          236 -GKFDAVLDTIGA  247 (307)
Q Consensus       236 -~~~dvvid~~g~  247 (307)
                       +++|++|++.|.
T Consensus        99 ~g~id~li~nAg~  111 (267)
T 3gdg_A           99 FGQIDAFIANAGA  111 (267)
T ss_dssp             TSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence             579999999883

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=96.95  E-value=0.0031  Score=51.81  Aligned_cols=99  Identities=19%  Similarity=0.169  Sum_probs=66.6

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc---eEEeCCChhHHHHhcCCcc
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE---QAVDYSSKDIELAIKGKFD  239 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~---~v~~~~~~~~~~~~~~~~d  239 (307)
                      ....++++++||-+|+ | .|..++.+++. +.+|+++..+++ .+.    ++..+..   .++..+..+.... ...||
T Consensus        49 ~~l~~~~~~~vLDlGc-G-~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~-~~~~D  124 (204)
T 3njr_A           49 AALAPRRGELLWDIGG-G-SGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALAD-LPLPE  124 (204)
T ss_dssp             HHHCCCTTCEEEEETC-T-TCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTT-SCCCS
T ss_pred             HhcCCCCCCEEEEecC-C-CCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhccc-CCCCC
Confidence            3567889999999994 4 48888888888 889999965543 333    3445543   2333332221111 14799


Q ss_pred             EEEECCCCh-hhHHHHHhcccCCcEEEEeccC
Q 021831          240 AVLDTIGAP-ETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       240 vvid~~g~~-~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      +|+...+.. ..+..+.+.|+|+|+++.....
T Consensus       125 ~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~  156 (204)
T 3njr_A          125 AVFIGGGGSQALYDRLWEWLAPGTRIVANAVT  156 (204)
T ss_dssp             EEEECSCCCHHHHHHHHHHSCTTCEEEEEECS
T ss_pred             EEEECCcccHHHHHHHHHhcCCCcEEEEEecC
Confidence            999765543 2678889999999999986653

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.91  E-value=0.002  Score=54.00  Aligned_cols=97  Identities=9%  Similarity=0.049  Sum_probs=62.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCccHH-HHHHcCCc-eEEeCCChhHHHHhcCCccEEEECCCChh--
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSID-RVLAAGAE-QAVDYSSKDIELAIKGKFDAVLDTIGAPE--  249 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~~~~~-~~~~~g~~-~v~~~~~~~~~~~~~~~~dvvid~~g~~~--  249 (307)
                      -.+|||+||+|.+|..+++.+...| ++|+++.++.+.. .+...+.. ...|..+.+..+....++|+||++.|...  
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~~~  102 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGEDLD  102 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTTHH
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCchh
Confidence            3689999999999999999999999 7999987765321 11111211 11234443333333367999999988752  


Q ss_pred             -hHHHHHhcccC--CcEEEEeccCc
Q 021831          250 -TERLGLNFLKR--GGHYMTLHGET  271 (307)
Q Consensus       250 -~~~~~~~~l~~--~G~~v~~g~~~  271 (307)
                       ....++..++.  .++||.++...
T Consensus       103 ~~~~~~~~~~~~~~~~~iV~iSS~~  127 (236)
T 3qvo_A          103 IQANSVIAAMKACDVKRLIFVLSLG  127 (236)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred             HHHHHHHHHHHHcCCCEEEEEecce
Confidence             23445555543  36899988754

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=96.90  E-value=0.0036  Score=50.79  Aligned_cols=95  Identities=16%  Similarity=0.138  Sum_probs=60.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHH-HHHcCCceEE--eCCChhHHHHhcCCccEEEECCCChh---
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR-VLAAGAEQAV--DYSSKDIELAIKGKFDAVLDTIGAPE---  249 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~-~~~~g~~~v~--~~~~~~~~~~~~~~~dvvid~~g~~~---  249 (307)
                      .+|||+||+|.+|..+++.+...|.+|+++.++..... ....+ ..++  |..+.+.......++|+||++.|...   
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~   82 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRP-AHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLS   82 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCC-SEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCCS
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCc-eEEEEecCCCHHHHHHHHcCCCEEEECccCCCCCC
Confidence            68999999999999999999889999999877643211 10112 2233  33333222222357999999988532   


Q ss_pred             -------hHHHHHhcccC--CcEEEEeccCc
Q 021831          250 -------TERLGLNFLKR--GGHYMTLHGET  271 (307)
Q Consensus       250 -------~~~~~~~~l~~--~G~~v~~g~~~  271 (307)
                             ....+++.++.  -++++.++...
T Consensus        83 ~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~  113 (206)
T 1hdo_A           83 PTTVMSEGARNIVAAMKAHGVDKVVACTSAF  113 (206)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTCCEEEEECCGG
T ss_pred             ccchHHHHHHHHHHHHHHhCCCeEEEEeeee
Confidence                   13344444432  36898887653

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=96.89  E-value=0.0046  Score=56.61  Aligned_cols=91  Identities=14%  Similarity=0.061  Sum_probs=67.7

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhH
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE  251 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~  251 (307)
                      -.|.+|.|+| .|.+|..+++.++.+|++|++..+... ...+...|...+      ++.+.+ ...|+|+.+.+....+
T Consensus       209 L~GktVgIiG-~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~------sL~eal-~~ADVVilt~gt~~iI  280 (436)
T 3h9u_A          209 IAGKTACVCG-YGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVL------LVEDVV-EEAHIFVTTTGNDDII  280 (436)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC------CHHHHT-TTCSEEEECSSCSCSB
T ss_pred             ccCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeec------CHHHHH-hhCCEEEECCCCcCcc
Confidence            4699999999 599999999999999999988765443 233555665322      344443 4689999988875444


Q ss_pred             H-HHHhcccCCcEEEEeccCc
Q 021831          252 R-LGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       252 ~-~~~~~l~~~G~~v~~g~~~  271 (307)
                      . ..+..|+++..++.+|...
T Consensus       281 ~~e~l~~MK~gAIVINvgRg~  301 (436)
T 3h9u_A          281 TSEHFPRMRDDAIVCNIGHFD  301 (436)
T ss_dssp             CTTTGGGCCTTEEEEECSSSG
T ss_pred             CHHHHhhcCCCcEEEEeCCCC
Confidence            3 6778899999999998553

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=96.79  E-value=0.0024  Score=53.82  Aligned_cols=92  Identities=13%  Similarity=0.098  Sum_probs=56.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCC-hhHHHHhc---CCccEEEECCCChh--
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSS-KDIELAIK---GKFDAVLDTIGAPE--  249 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~~---~~~dvvid~~g~~~--  249 (307)
                      .++||+||+|.+|..+++.+...|++|+++.+..+...     .....|..+ .++.+.+.   +++|++|++.|...  
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~   76 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE-----ADLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVGVTA   76 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----CCTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCCTTS
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc-----ccccCCcccHHHHHHHHHHcCCCccEEEECCCCCCcc
Confidence            36999999999999999988889999999877543110     000011111 11222222   57999999987431  


Q ss_pred             ----------------hHHHHHhcccC--CcEEEEeccCcc
Q 021831          250 ----------------TERLGLNFLKR--GGHYMTLHGETA  272 (307)
Q Consensus       250 ----------------~~~~~~~~l~~--~G~~v~~g~~~~  272 (307)
                                      .+..+...++.  .+++|.++....
T Consensus        77 ~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~  117 (255)
T 2dkn_A           77 ANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAA  117 (255)
T ss_dssp             SCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred             hhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccc
Confidence                            11233334433  389999886543

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=96.73  E-value=0.0041  Score=52.05  Aligned_cols=97  Identities=16%  Similarity=0.173  Sum_probs=60.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCccH-HHHHHcCCceEE--eCCChhHHHHhcCCccEEEECCCChh
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-DRVLAAGAEQAV--DYSSKDIELAIKGKFDAVLDTIGAPE  249 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~~~~~~~-~~~~~~g~~~v~--~~~~~~~~~~~~~~~dvvid~~g~~~  249 (307)
                      +.++||+||+|.+|...++.+...|+  +|+++.++... ......+. ..+  |..+.+..+....++|++|++.|...
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~   96 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNV-NQEVVDFEKLDDYASAFQGHDVGFCCLGTTR   96 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGC-EEEECCGGGGGGGGGGGSSCSEEEECCCCCH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCc-eEEecCcCCHHHHHHHhcCCCEEEECCCccc
Confidence            67899999999999999999988999  99998775431 11111122 222  22222211222257999999998631


Q ss_pred             --------------hHHHHHhcccC--CcEEEEeccCcc
Q 021831          250 --------------TERLGLNFLKR--GGHYMTLHGETA  272 (307)
Q Consensus       250 --------------~~~~~~~~l~~--~G~~v~~g~~~~  272 (307)
                                    ....+++.++.  .+++|.++....
T Consensus        97 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~  135 (242)
T 2bka_A           97 GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGA  135 (242)
T ss_dssp             HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             ccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcC
Confidence                          11233444432  368999887543

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=96.71  E-value=0.0059  Score=52.60  Aligned_cols=95  Identities=12%  Similarity=0.063  Sum_probs=61.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCccH-HHHHHcCCce-EEeCCChhHHHHhcCCccEEEECCCCh-----
Q 021831          177 RLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRVLAAGAEQ-AVDYSSKDIELAIKGKFDAVLDTIGAP-----  248 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~~~~-~~~~~~g~~~-v~~~~~~~~~~~~~~~~dvvid~~g~~-----  248 (307)
                      +|||+||+|.+|..+++.+... |.+|+++.++... ..+...+... ..|..+.+.......++|+||.+.+..     
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~   81 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSFK   81 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCSHHH
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccchh
Confidence            5999999999999999888877 8899999876542 1122223321 234444433333336799999998852     


Q ss_pred             --hhHHHHHhcccCC--cEEEEeccCc
Q 021831          249 --ETERLGLNFLKRG--GHYMTLHGET  271 (307)
Q Consensus       249 --~~~~~~~~~l~~~--G~~v~~g~~~  271 (307)
                        .....+++.++..  +++|.++...
T Consensus        82 ~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           82 RIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             hHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence              1234455555443  5888888654

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.69  E-value=0.012  Score=50.67  Aligned_cols=98  Identities=16%  Similarity=0.204  Sum_probs=68.5

Q ss_pred             ccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHH
Q 021831          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (307)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (307)
                      ...++.......+++...---.|.+++|+|.++.+|..++.++...|+.|+...+.                  ..++.+
T Consensus       139 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~------------------t~~L~~  200 (285)
T 3l07_A          139 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF------------------TTDLKS  200 (285)
T ss_dssp             CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT------------------CSSHHH
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC------------------chhHHH
Confidence            34455555566666544333479999999986779999999999999987655321                  112333


Q ss_pred             HhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       233 ~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .+ ..+|+||.++|.+..+.  -..+++|..+|.+|..+
T Consensus       201 ~~-~~ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~~  236 (285)
T 3l07_A          201 HT-TKADILIVAVGKPNFIT--ADMVKEGAVVIDVGINH  236 (285)
T ss_dssp             HH-TTCSEEEECCCCTTCBC--GGGSCTTCEEEECCCEE
T ss_pred             hc-ccCCEEEECCCCCCCCC--HHHcCCCcEEEEecccC
Confidence            33 45899999999874432  35679999999999664

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=96.66  E-value=0.012  Score=49.88  Aligned_cols=124  Identities=10%  Similarity=0.045  Sum_probs=71.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH---cCCEEEEEeCCcc-HHH-HHHc-----CCc-eE--EeCCChh-H---HHHhc-
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVA---SGCHVSATCGSKS-IDR-VLAA-----GAE-QA--VDYSSKD-I---ELAIK-  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~---~G~~Vi~~~~~~~-~~~-~~~~-----g~~-~v--~~~~~~~-~---~~~~~-  235 (307)
                      .+.++||+||++++|.+.++.+..   .|++|+.+.++.+ .+. ..++     +.. ..  .|.++.+ .   .+.+. 
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence            367899999999999998888877   8999999877643 221 2222     322 22  2444432 2   22221 


Q ss_pred             ----CCcc--EEEECCCCh----------hh------------------HHHHHhcccC----CcEEEEeccCccccccc
Q 021831          236 ----GKFD--AVLDTIGAP----------ET------------------ERLGLNFLKR----GGHYMTLHGETAALADH  277 (307)
Q Consensus       236 ----~~~d--vvid~~g~~----------~~------------------~~~~~~~l~~----~G~~v~~g~~~~~~~~~  277 (307)
                          +++|  ++|++.|..          ..                  ...++..|..    +|++|.++.........
T Consensus        85 ~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  164 (259)
T 1oaa_A           85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYK  164 (259)
T ss_dssp             SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCT
T ss_pred             ccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCCC
Confidence                3578  999998731          11                  1234445533    48999998765533333


Q ss_pred             ccceechhHHHHHHHHHHHh
Q 021831          278 YGLALGLPIATTVLLKKRMQ  297 (307)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~  297 (307)
                      ....++....+...+-+.+.
T Consensus       165 ~~~~Y~asKaa~~~~~~~la  184 (259)
T 1oaa_A          165 GWGLYCAGKAARDMLYQVLA  184 (259)
T ss_dssp             TCHHHHHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHH
Confidence            33334444444444444443

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=96.65  E-value=0.017  Score=50.10  Aligned_cols=75  Identities=15%  Similarity=0.161  Sum_probs=51.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H-HHHHc----CC-ceEEeCCChhHHHHhcCCccEEEECC
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAA----GA-EQAVDYSSKDIELAIKGKFDAVLDTI  245 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~-~~~~~----g~-~~v~~~~~~~~~~~~~~~~dvvid~~  245 (307)
                      -+|.++||+|++|++|.+++..+...|++|+.+.++... + .++++    +. ....|..+.+-.+.....+|++|+++
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~a  196 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAG  196 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECC
Confidence            368899999999999999999999999998777765332 2 22222    32 23345555433333335699999999


Q ss_pred             CC
Q 021831          246 GA  247 (307)
Q Consensus       246 g~  247 (307)
                      |.
T Consensus       197 g~  198 (287)
T 1lu9_A          197 AI  198 (287)
T ss_dssp             CT
T ss_pred             Cc
Confidence            73

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=96.65  E-value=0.0022  Score=53.75  Aligned_cols=99  Identities=22%  Similarity=0.294  Sum_probs=65.0

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCceEEeCCChhHHHHhc--CCccEE
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAEQAVDYSSKDIELAIK--GKFDAV  241 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~~v~~~~~~~~~~~~~--~~~dvv  241 (307)
                      ...++++++||-+|+ | .|..+..+++..+.+|+++..+.. .+.    +...+...+ .....+......  ++||+|
T Consensus        86 ~l~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~d~~~~~~~~~~fD~I  162 (235)
T 1jg1_A           86 IANLKPGMNILEVGT-G-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNV-HVILGDGSKGFPPKAPYDVI  162 (235)
T ss_dssp             HHTCCTTCCEEEECC-T-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSE-EEEESCGGGCCGGGCCEEEE
T ss_pred             hcCCCCCCEEEEEeC-C-cCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCc-EEEECCcccCCCCCCCccEE
Confidence            557889999999994 4 799999999887678888865443 333    333454322 111111111111  359999


Q ss_pred             EECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          242 LDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       242 id~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      +.+..-......+.+.|++||+++..-..
T Consensus       163 i~~~~~~~~~~~~~~~L~pgG~lvi~~~~  191 (235)
T 1jg1_A          163 IVTAGAPKIPEPLIEQLKIGGKLIIPVGS  191 (235)
T ss_dssp             EECSBBSSCCHHHHHTEEEEEEEEEEECS
T ss_pred             EECCcHHHHHHHHHHhcCCCcEEEEEEec
Confidence            98876554557888999999998775543

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.61  E-value=0.015  Score=50.11  Aligned_cols=97  Identities=19%  Similarity=0.240  Sum_probs=68.6

Q ss_pred             cccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHH
Q 021831          154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA  233 (307)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  233 (307)
                      ..++........++...---.|.+++|.|.++.+|..++.++...|+.|....+..                  .++.+.
T Consensus       140 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T------------------~~L~~~  201 (286)
T 4a5o_A          140 LRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT------------------RDLADH  201 (286)
T ss_dssp             SCCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC------------------SCHHHH
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC------------------cCHHHH
Confidence            44555555666665443334799999999877799999999999999887763311                  122332


Q ss_pred             hcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       234 ~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      + ..+|+||.++|.+..+.  ...+++|..+|.+|...
T Consensus       202 ~-~~ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~~  236 (286)
T 4a5o_A          202 V-SRADLVVVAAGKPGLVK--GEWIKEGAIVIDVGINR  236 (286)
T ss_dssp             H-HTCSEEEECCCCTTCBC--GGGSCTTCEEEECCSCS
T ss_pred             h-ccCCEEEECCCCCCCCC--HHHcCCCeEEEEecccc
Confidence            2 34899999999874432  35679999999999765

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=96.61  E-value=0.026  Score=49.92  Aligned_cols=74  Identities=14%  Similarity=0.024  Sum_probs=50.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--HHH---HHHc------CCceEE--eCCChhHHHHhcCCccE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDR---VLAA------GAEQAV--DYSSKDIELAIKGKFDA  240 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--~~~---~~~~------g~~~v~--~~~~~~~~~~~~~~~dv  240 (307)
                      .+.+|||+||+|.+|..+++.+...|.+|+++.+...  ...   +...      ....++  |..+.+....+..++|+
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~  103 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH  103 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence            3679999999999999999999999999999977432  222   2222      222333  33333333333358999


Q ss_pred             EEECCCC
Q 021831          241 VLDTIGA  247 (307)
Q Consensus       241 vid~~g~  247 (307)
                      ||.+.+.
T Consensus       104 Vih~A~~  110 (351)
T 3ruf_A          104 VLHQAAL  110 (351)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999984

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.60  E-value=0.015  Score=50.47  Aligned_cols=98  Identities=19%  Similarity=0.255  Sum_probs=68.4

Q ss_pred             cccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CccHHHHHHcCCceEEeCCChhHHH
Q 021831          154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSIDRVLAAGAEQAVDYSSKDIEL  232 (307)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~  232 (307)
                      ..++....+...++...---.|.+++|+|.++.+|..++.++...|+.|+...+ ..+..                 +.+
T Consensus       144 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~-----------------l~~  206 (300)
T 4a26_A          144 FTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED-----------------MID  206 (300)
T ss_dssp             CCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH-----------------HHH
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch-----------------hhh
Confidence            345555666666664443347999999998777999999999999999877644 22111                 002


Q ss_pred             HhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       233 ~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .+ ..+|+||.++|.+..+.  -..+++|..+|.+|...
T Consensus       207 ~~-~~ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~~  242 (300)
T 4a26_A          207 YL-RTADIVIAAMGQPGYVK--GEWIKEGAAVVDVGTTP  242 (300)
T ss_dssp             HH-HTCSEEEECSCCTTCBC--GGGSCTTCEEEECCCEE
T ss_pred             hh-ccCCEEEECCCCCCCCc--HHhcCCCcEEEEEeccC
Confidence            22 35899999999874332  24679999999999653

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=96.59  E-value=0.0083  Score=45.87  Aligned_cols=94  Identities=21%  Similarity=0.170  Sum_probs=60.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCceEE-eCCChhHHHHhc-CCccEEEECCCChhhH
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAV-DYSSKDIELAIK-GKFDAVLDTIGAPETE  251 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~~v~-~~~~~~~~~~~~-~~~dvvid~~g~~~~~  251 (307)
                      ..+++|.|+ |.+|...++.+...|.+|+++.+.++ .+.+++.+...+. |..+++..+... .++|++|.++++...-
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~n   84 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEFN   84 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHHH
Confidence            468999996 99999999999999999998866543 4456666654222 333344333332 5799999999975322


Q ss_pred             H---HHHhcccCCcEEEEeccC
Q 021831          252 R---LGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       252 ~---~~~~~l~~~G~~v~~g~~  270 (307)
                      .   ...+.+. ..+++.....
T Consensus        85 ~~~~~~a~~~~-~~~iia~~~~  105 (141)
T 3llv_A           85 LKILKALRSVS-DVYAIVRVSS  105 (141)
T ss_dssp             HHHHHHHHHHC-CCCEEEEESC
T ss_pred             HHHHHHHHHhC-CceEEEEEcC
Confidence            2   2333334 4555554433

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.59  E-value=0.012  Score=51.81  Aligned_cols=89  Identities=13%  Similarity=0.095  Sum_probs=66.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhh---
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET---  250 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~---  250 (307)
                      .|.+|.|+| .|.+|...++.++..|++|++..+..+...+.+.|...   .   ++.+.+ ...|+|+.+++....   
T Consensus       141 ~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~---~---~l~ell-~~aDvVvl~~P~~~~t~~  212 (313)
T 2ekl_A          141 AGKTIGIVG-FGRIGTKVGIIANAMGMKVLAYDILDIREKAEKINAKA---V---SLEELL-KNSDVISLHVTVSKDAKP  212 (313)
T ss_dssp             TTCEEEEES-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEE---C---CHHHHH-HHCSEEEECCCCCTTSCC
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCCcchhHHHhcCcee---c---CHHHHH-hhCCEEEEeccCChHHHH
Confidence            578999999 59999999999999999999887766555566777642   1   222322 248999999885421   


Q ss_pred             -H-HHHHhcccCCcEEEEeccC
Q 021831          251 -E-RLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       251 -~-~~~~~~l~~~G~~v~~g~~  270 (307)
                       + ...+..|++++.+|.++..
T Consensus       213 li~~~~l~~mk~ga~lIn~arg  234 (313)
T 2ekl_A          213 IIDYPQFELMKDNVIIVNTSRA  234 (313)
T ss_dssp             SBCHHHHHHSCTTEEEEESSCG
T ss_pred             hhCHHHHhcCCCCCEEEECCCC
Confidence             2 4566789999999998864

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.59  E-value=0.0032  Score=51.81  Aligned_cols=98  Identities=18%  Similarity=0.274  Sum_probs=66.0

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCcc-HHHH----HHcCCce--EEeCCChhHHHHh--cC
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKS-IDRV----LAAGAEQ--AVDYSSKDIELAI--KG  236 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G--~~Vi~~~~~~~-~~~~----~~~g~~~--v~~~~~~~~~~~~--~~  236 (307)
                      ....++++++||.+|+ | .|..+..+++..|  .+|+++..+.. .+.+    ...+...  +...+.   ....  .+
T Consensus        71 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~~~~~~  145 (215)
T 2yxe_A           71 ELLDLKPGMKVLEIGT-G-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDG---TLGYEPLA  145 (215)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCG---GGCCGGGC
T ss_pred             HhhCCCCCCEEEEECC-C-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc---ccCCCCCC
Confidence            3567889999999994 4 6899999998876  68999865543 3332    2334322  222221   1111  25


Q ss_pred             CccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          237 KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       237 ~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      .||+|+.+.........+.+.|+++|+++..-..
T Consensus       146 ~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~~~  179 (215)
T 2yxe_A          146 PYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPVGR  179 (215)
T ss_dssp             CEEEEEESSBBSSCCHHHHHTEEEEEEEEEEESS
T ss_pred             CeeEEEECCchHHHHHHHHHHcCCCcEEEEEECC
Confidence            7999998876554557888999999999876554

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.58  E-value=0.0071  Score=52.65  Aligned_cols=98  Identities=11%  Similarity=0.022  Sum_probs=67.0

Q ss_pred             HHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc---eEEeCCChhHHHHhcCC
Q 021831          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE---QAVDYSSKDIELAIKGK  237 (307)
Q Consensus       166 l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~---~v~~~~~~~~~~~~~~~  237 (307)
                      +.....++++++||-+|. | .|..+..+++..|++|+++..+.. .+.    ....+..   .+...+..++    .+.
T Consensus        64 ~~~~~~~~~~~~vLDiGc-G-~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~  137 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIGC-G-WGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF----DEP  137 (302)
T ss_dssp             HHHTTCCCTTCEEEEETC-T-TSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC----CCC
T ss_pred             HHHHcCCCCcCEEEEeec-c-CcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc----CCC
Confidence            334567889999999993 4 599999999988999999966543 333    3344432   2333322222    468


Q ss_pred             ccEEEECCC-----C----------hhhHHHHHhcccCCcEEEEecc
Q 021831          238 FDAVLDTIG-----A----------PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       238 ~dvvid~~g-----~----------~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      ||+|+....     +          ...+..+.+.|+|||+++....
T Consensus       138 fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~  184 (302)
T 3hem_A          138 VDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI  184 (302)
T ss_dssp             CSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred             ccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence            999987532     1          2467888899999999988664

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.58  E-value=0.0061  Score=52.86  Aligned_cols=74  Identities=9%  Similarity=0.201  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHcCCc-eE--EeCCChh-HHHHhc--CCccEEEECC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGAE-QA--VDYSSKD-IELAIK--GKFDAVLDTI  245 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~g~~-~v--~~~~~~~-~~~~~~--~~~dvvid~~  245 (307)
                      .|.++||+||+|++|.++++.+...|++|+.+.++... +. .++++.. ..  .|.++.+ ..+.+.  +++|++|++.
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~nA   94 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINNA   94 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEECC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEECC
Confidence            57899999999999999999999999999999876543 22 3334332 22  2333332 222222  4789999998


Q ss_pred             CC
Q 021831          246 GA  247 (307)
Q Consensus       246 g~  247 (307)
                      |.
T Consensus        95 g~   96 (291)
T 3rd5_A           95 GI   96 (291)
T ss_dssp             CC
T ss_pred             cC
Confidence            84

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=96.55  E-value=0.015  Score=45.97  Aligned_cols=99  Identities=16%  Similarity=0.143  Sum_probs=65.0

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCcc-HHHH----HHcCCc-eE-EeCCChhHHHHhcCCccE
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKS-IDRV----LAAGAE-QA-VDYSSKDIELAIKGKFDA  240 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~~~-~~~~----~~~g~~-~v-~~~~~~~~~~~~~~~~dv  240 (307)
                      ....+++++||-+|+ | .|..+..+++.. +.+|+++..+.. .+.+    +..+.. .+ +..+..+......+.||+
T Consensus        20 ~~~~~~~~~vldiG~-G-~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~   97 (178)
T 3hm2_A           20 ALAPKPHETLWDIGG-G-SGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDV   97 (178)
T ss_dssp             HHCCCTTEEEEEEST-T-TTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSE
T ss_pred             HhcccCCCeEEEeCC-C-CCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCE
Confidence            557789999999994 4 499999998887 458998855543 3333    344543 22 232221211111157999


Q ss_pred             EEECCCCh--hhHHHHHhcccCCcEEEEecc
Q 021831          241 VLDTIGAP--ETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       241 vid~~g~~--~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      |+......  ..+..+.+.|+++|+++....
T Consensus        98 i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  128 (178)
T 3hm2_A           98 IFIGGGLTAPGVFAAAWKRLPVGGRLVANAV  128 (178)
T ss_dssp             EEECC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred             EEECCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence            99765433  378999999999999997654

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.51  E-value=0.017  Score=49.87  Aligned_cols=97  Identities=20%  Similarity=0.252  Sum_probs=68.5

Q ss_pred             cccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHH
Q 021831          154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA  233 (307)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  233 (307)
                      ..++........++...---.|.+++|+|+++.+|..++.++...|+.|+...+..                  .++.+.
T Consensus       139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t------------------~~L~~~  200 (285)
T 3p2o_A          139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT------------------KDLSLY  200 (285)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------------SCHHHH
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc------------------hhHHHH
Confidence            45555555566665443334799999999877799999999999999877654321                  123333


Q ss_pred             hcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       234 ~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      + ..+|+||.++|.+..+  --..+++|..+|.+|...
T Consensus       201 ~-~~ADIVI~Avg~p~~I--~~~~vk~GavVIDVgi~~  235 (285)
T 3p2o_A          201 T-RQADLIIVAAGCVNLL--RSDMVKEGVIVVDVGINR  235 (285)
T ss_dssp             H-TTCSEEEECSSCTTCB--CGGGSCTTEEEEECCCEE
T ss_pred             h-hcCCEEEECCCCCCcC--CHHHcCCCeEEEEeccCc
Confidence            3 4589999999987443  235679999999999654

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=96.49  E-value=0.0024  Score=52.19  Aligned_cols=143  Identities=17%  Similarity=0.161  Sum_probs=79.5

Q ss_pred             CCCCCEEEEecCCCCCCCcceeEEE-ecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHH
Q 021831          110 LTVGQEVFGALHPTAVRGTYADYAV-LSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG  188 (307)
Q Consensus       110 ~~~Gd~V~~~~~~~~~~g~~~~~~~-~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G  188 (307)
                      ++.|+.+...       ..|.+|.. .+....+.+++++.+......  ........+.  ..++++++||-+|. | .|
T Consensus         6 ~~~~~~~~~~-------p~w~~~~~~~~~~~~~~~~~~~~f~~~~~~--~~~~~~~~l~--~~~~~~~~vLDiG~-G-~G   72 (205)
T 3grz_A            6 INLSRHLAIV-------PEWEDYQPVFKDQEIIRLDPGLAFGTGNHQ--TTQLAMLGIE--RAMVKPLTVADVGT-G-SG   72 (205)
T ss_dssp             EEEETTEEEE-------ETTCCCCCSSTTCEEEEESCC-----CCHH--HHHHHHHHHH--HHCSSCCEEEEETC-T-TS
T ss_pred             EEECCcEEEe-------ccccccccCCCCceeEEecCCcccCCCCCc--cHHHHHHHHH--HhccCCCEEEEECC-C-CC
Confidence            4556655544       44666665 566677778777665443211  1111111222  12568899999994 4 37


Q ss_pred             HHHHHHHHHcCC-EEEEEeCCcc-HHHH----HHcCCc--eEEeCCChhHHHHhcCCccEEEECCCCh---hhHHHHHhc
Q 021831          189 FAAVQFSVASGC-HVSATCGSKS-IDRV----LAAGAE--QAVDYSSKDIELAIKGKFDAVLDTIGAP---ETERLGLNF  257 (307)
Q Consensus       189 ~~~~~~a~~~G~-~Vi~~~~~~~-~~~~----~~~g~~--~v~~~~~~~~~~~~~~~~dvvid~~g~~---~~~~~~~~~  257 (307)
                      ..+..+++ .+. +|+++..+.. .+.+    ...+..  .++..+..+   ...+.||+|+....-.   ..+..+.+.
T Consensus        73 ~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~---~~~~~fD~i~~~~~~~~~~~~l~~~~~~  148 (205)
T 3grz_A           73 ILAIAAHK-LGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLA---DVDGKFDLIVANILAEILLDLIPQLDSH  148 (205)
T ss_dssp             HHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTT---TCCSCEEEEEEESCHHHHHHHGGGSGGG
T ss_pred             HHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccc---cCCCCceEEEECCcHHHHHHHHHHHHHh
Confidence            77777776 465 8999865543 3333    334433  233332222   2236799999865543   234666778


Q ss_pred             ccCCcEEEEecc
Q 021831          258 LKRGGHYMTLHG  269 (307)
Q Consensus       258 l~~~G~~v~~g~  269 (307)
                      |+++|+++....
T Consensus       149 L~~gG~l~~~~~  160 (205)
T 3grz_A          149 LNEDGQVIFSGI  160 (205)
T ss_dssp             EEEEEEEEEEEE
T ss_pred             cCCCCEEEEEec
Confidence            999999988543

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.49  E-value=0.018  Score=50.47  Aligned_cols=89  Identities=17%  Similarity=0.223  Sum_probs=66.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChh----
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE----  249 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~----  249 (307)
                      .|.+|.|+| .|.+|...++.++.+|++|++..+..+...+.+.|....      ++.+.+ ...|+|+.+++...    
T Consensus       141 ~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~------~l~ell-~~aDvV~l~~p~~~~t~~  212 (307)
T 1wwk_A          141 EGKTIGIIG-FGRIGYQVAKIANALGMNILLYDPYPNEERAKEVNGKFV------DLETLL-KESDVVTIHVPLVESTYH  212 (307)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHTTCEEC------CHHHHH-HHCSEEEECCCCSTTTTT
T ss_pred             CCceEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCCChhhHhhcCcccc------CHHHHH-hhCCEEEEecCCChHHhh
Confidence            578999999 599999999999999999999877665555667776421      222322 34899999988532    


Q ss_pred             hH-HHHHhcccCCcEEEEeccC
Q 021831          250 TE-RLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       250 ~~-~~~~~~l~~~G~~v~~g~~  270 (307)
                      .+ ...+..|++++.+|.++..
T Consensus       213 li~~~~l~~mk~ga~lin~arg  234 (307)
T 1wwk_A          213 LINEERLKLMKKTAILINTSRG  234 (307)
T ss_dssp             CBCHHHHHHSCTTCEEEECSCG
T ss_pred             hcCHHHHhcCCCCeEEEECCCC
Confidence            12 3566789999999998864

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.47  E-value=0.016  Score=51.40  Aligned_cols=89  Identities=16%  Similarity=0.051  Sum_probs=67.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhh---
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET---  250 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~---  250 (307)
                      .|.+|.|+| .|.+|...++.++.+|++|++..+......+.+.|....      ++.+.+ ...|+|+.+++....   
T Consensus       164 ~g~tvgIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~------~l~ell-~~aDvV~l~~P~t~~t~~  235 (335)
T 2g76_A          164 NGKTLGILG-LGRIGREVATRMQSFGMKTIGYDPIISPEVSASFGVQQL------PLEEIW-PLCDFITVHTPLLPSTTG  235 (335)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSSCHHHHHHTTCEEC------CHHHHG-GGCSEEEECCCCCTTTTT
T ss_pred             CcCEEEEEe-ECHHHHHHHHHHHHCCCEEEEECCCcchhhhhhcCceeC------CHHHHH-hcCCEEEEecCCCHHHHH
Confidence            578999999 699999999999999999998876655555667776421      333333 458999999886421   


Q ss_pred             -H-HHHHhcccCCcEEEEeccC
Q 021831          251 -E-RLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       251 -~-~~~~~~l~~~G~~v~~g~~  270 (307)
                       + ...+..|++++.+|.++..
T Consensus       236 li~~~~l~~mk~gailIN~arg  257 (335)
T 2g76_A          236 LLNDNTFAQCKKGVRVVNCARG  257 (335)
T ss_dssp             SBCHHHHTTSCTTEEEEECSCT
T ss_pred             hhCHHHHhhCCCCcEEEECCCc
Confidence             2 4577889999999998864

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.46  E-value=0.0059  Score=49.97  Aligned_cols=99  Identities=19%  Similarity=0.194  Sum_probs=65.1

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc--eEEeCCChhHHHHhcCCccE
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE--QAVDYSSKDIELAIKGKFDA  240 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~--~v~~~~~~~~~~~~~~~~dv  240 (307)
                      ....++++++||-+|+ | .|..+..+++. +.+|+++..+.. .+.    +...+..  .+...+...... ..+.||+
T Consensus        71 ~~l~~~~~~~vLdiG~-G-~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D~  146 (210)
T 3lbf_A           71 ELLELTPQSRVLEIGT-G-SGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQ-ARAPFDA  146 (210)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-GGCCEEE
T ss_pred             HhcCCCCCCEEEEEcC-C-CCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCc-cCCCccE
Confidence            3667889999999994 4 58888888887 789999965543 333    3334543  223222211100 1257999


Q ss_pred             EEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          241 VLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       241 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      |+....-......+.+.|++||+++..-..
T Consensus       147 i~~~~~~~~~~~~~~~~L~pgG~lv~~~~~  176 (210)
T 3lbf_A          147 IIVTAAPPEIPTALMTQLDEGGILVLPVGE  176 (210)
T ss_dssp             EEESSBCSSCCTHHHHTEEEEEEEEEEECS
T ss_pred             EEEccchhhhhHHHHHhcccCcEEEEEEcC
Confidence            998765543446788999999998876554

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=96.44  E-value=0.015  Score=48.63  Aligned_cols=72  Identities=18%  Similarity=0.056  Sum_probs=49.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCccHHHHHHcC--Cc-eEEeCCChhHHHHhcCCccEEEECCCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSIDRVLAAG--AE-QAVDYSSKDIELAIKGKFDAVLDTIGA  247 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~g--~~-~v~~~~~~~~~~~~~~~~dvvid~~g~  247 (307)
                      .+.+|||+||+|.+|...++.+...  |.+|+++.++...  +.+++  .. ...|..+.+..+.+..++|+||++.|.
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~   79 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG--KEKIGGEADVFIGDITDADSINPAFQGIDALVILTSA   79 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHH--HHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCc--hhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence            4678999999999999999999888  7899998876432  22222  22 122444433223333579999999873

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=96.41  E-value=0.027  Score=52.72  Aligned_cols=77  Identities=21%  Similarity=0.310  Sum_probs=51.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCcc----H----HHHHHcCCc-eEE--eCCChh-HHHHhc--
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS----I----DRVLAAGAE-QAV--DYSSKD-IELAIK--  235 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~----~----~~~~~~g~~-~v~--~~~~~~-~~~~~~--  235 (307)
                      .++++.++||+|++|++|..+++.+...|+ +|+.+.++..    .    +.+++.|.. .++  |..+.+ +.+.+.  
T Consensus       222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i  301 (486)
T 2fr1_A          222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI  301 (486)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             CcCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH
Confidence            357889999999999999999988888899 5887776542    1    123445643 222  333332 222222  


Q ss_pred             ---CCccEEEECCCC
Q 021831          236 ---GKFDAVLDTIGA  247 (307)
Q Consensus       236 ---~~~dvvid~~g~  247 (307)
                         +.+|.||++.|.
T Consensus       302 ~~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          302 GDDVPLSAVFHAAAT  316 (486)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             HhcCCCcEEEECCcc
Confidence               367999999884

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.41  E-value=0.021  Score=48.96  Aligned_cols=95  Identities=13%  Similarity=0.128  Sum_probs=68.2

Q ss_pred             cccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHH
Q 021831          154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA  233 (307)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  233 (307)
                      ..++.......+++...  -.|.+++|.|+++.+|..++.++...|++|+...+..                  .++.+.
T Consensus       131 ~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t------------------~~L~~~  190 (276)
T 3ngx_A          131 LVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT------------------KDIGSM  190 (276)
T ss_dssp             SCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------------SCHHHH
T ss_pred             CCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc------------------ccHHHh
Confidence            44555566666676554  5799999999877799999999999999987764321                  122222


Q ss_pred             hcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       234 ~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      + ..+|+||.++|.+..+.  -..+++|..+|.+|..+
T Consensus       191 ~-~~ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~~  225 (276)
T 3ngx_A          191 T-RSSKIVVVAVGRPGFLN--REMVTPGSVVIDVGINY  225 (276)
T ss_dssp             H-HHSSEEEECSSCTTCBC--GGGCCTTCEEEECCCEE
T ss_pred             h-ccCCEEEECCCCCcccc--HhhccCCcEEEEeccCc
Confidence            2 23899999999874332  24679999999999765

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.41  E-value=0.0069  Score=50.52  Aligned_cols=97  Identities=14%  Similarity=0.218  Sum_probs=63.9

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCcc-HHHH----HHcCCc---eEEeCCChhHHHHh--cCC
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKS-IDRV----LAAGAE---QAVDYSSKDIELAI--KGK  237 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~~~-~~~~----~~~g~~---~v~~~~~~~~~~~~--~~~  237 (307)
                      .....++++||-+|+ | .|..+..+++.. +.+|+++..+.. .+.+    +..+..   .++..+..+.....  .+.
T Consensus        49 ~~~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~  126 (233)
T 2gpy_A           49 LLKMAAPARILEIGT-A-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPL  126 (233)
T ss_dssp             HHHHHCCSEEEEECC-T-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCC
T ss_pred             HHhccCCCEEEEecC-C-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCC
Confidence            344567899999994 4 788888999887 569999855443 3333    334542   23333323322333  357


Q ss_pred             ccEEEECCCC---hhhHHHHHhcccCCcEEEEe
Q 021831          238 FDAVLDTIGA---PETERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       238 ~dvvid~~g~---~~~~~~~~~~l~~~G~~v~~  267 (307)
                      ||+|+.....   ...+..+.+.|++||.++..
T Consensus       127 fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~  159 (233)
T 2gpy_A          127 FDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSD  159 (233)
T ss_dssp             EEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             ccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            9999876553   34668889999999999885

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=96.39  E-value=0.0065  Score=51.00  Aligned_cols=98  Identities=17%  Similarity=0.168  Sum_probs=63.7

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCcc-HHH----HHHcCCc---eEEeCCChhHHHHh----
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKS-IDR----VLAAGAE---QAVDYSSKDIELAI----  234 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~~-~~~----~~~~g~~---~v~~~~~~~~~~~~----  234 (307)
                      .....++++||-+|+ | .|..+..+++..  +.+|+++..+.. .+.    ++..|..   .+...+..+.....    
T Consensus        55 l~~~~~~~~VLdiG~-G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~  132 (239)
T 2hnk_A           55 LTKISGAKRIIEIGT-F-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSK  132 (239)
T ss_dssp             HHHHHTCSEEEEECC-T-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCS
T ss_pred             HHHhhCcCEEEEEeC-C-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhc
Confidence            344567899999994 3 699999999987  569999865543 333    3334543   22222222222222    


Q ss_pred             -----------c-CCccEEEECCCCh---hhHHHHHhcccCCcEEEEec
Q 021831          235 -----------K-GKFDAVLDTIGAP---ETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       235 -----------~-~~~dvvid~~g~~---~~~~~~~~~l~~~G~~v~~g  268 (307)
                                 . +.||+|+......   ..+..+.+.|++||.++..-
T Consensus       133 ~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  181 (239)
T 2hnk_A          133 SAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN  181 (239)
T ss_dssp             SCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             ccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence                       1 5699999876644   35678889999999998753

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.37  E-value=0.029  Score=47.60  Aligned_cols=92  Identities=20%  Similarity=0.243  Sum_probs=60.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHH----HHcCCc-eEEeCCChhHHHHh-cCCccEEEEC
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRV----LAAGAE-QAVDYSSKDIELAI-KGKFDAVLDT  244 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~----~~~g~~-~v~~~~~~~~~~~~-~~~~dvvid~  244 (307)
                      ++++++||-.|. |. |..++.+++ .|++|+++..+ ...+.+    ...+.. .+..   .++.+.+ .+.||+|+.+
T Consensus       118 ~~~~~~VLDiGc-G~-G~l~~~la~-~g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~---~d~~~~~~~~~fD~Vv~n  191 (254)
T 2nxc_A          118 LRPGDKVLDLGT-GS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVRPRFLE---GSLEAALPFGPFDLLVAN  191 (254)
T ss_dssp             CCTTCEEEEETC-TT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEE---SCHHHHGGGCCEEEEEEE
T ss_pred             cCCCCEEEEecC-CC-cHHHHHHHH-hCCeEEEEECCHHHHHHHHHHHHHcCCcEEEEE---CChhhcCcCCCCCEEEEC
Confidence            578999999994 43 777777666 57799998554 333333    334443 2222   2333333 3679999976


Q ss_pred             CCC---hhhHHHHHhcccCCcEEEEecc
Q 021831          245 IGA---PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       245 ~g~---~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      ...   ...+..+.+.|+|+|+++..+.
T Consensus       192 ~~~~~~~~~l~~~~~~LkpgG~lils~~  219 (254)
T 2nxc_A          192 LYAELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             CCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CcHHHHHHHHHHHHHHcCCCCEEEEEee
Confidence            532   2356778889999999999764

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=96.37  E-value=0.0094  Score=51.13  Aligned_cols=95  Identities=14%  Similarity=0.095  Sum_probs=60.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCcc-HHHHHHcCCceE-EeCCChhHHHHhcCCccEEEECCCCh----
Q 021831          177 RLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKS-IDRVLAAGAEQA-VDYSSKDIELAIKGKFDAVLDTIGAP----  248 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~~-~~~~~~~g~~~v-~~~~~~~~~~~~~~~~dvvid~~g~~----  248 (307)
                      +|||+||+|.+|..+++.+...  |.+|+++.++.. ...+...+...+ .|..+.+.......++|+||.+.+..    
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~   81 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYDNT   81 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCSCHH
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCcCch
Confidence            6999999999999999888877  889999877543 233333344322 24444332333335799999998741    


Q ss_pred             ---hhHHHHHhcccCC--cEEEEeccCc
Q 021831          249 ---ETERLGLNFLKRG--GHYMTLHGET  271 (307)
Q Consensus       249 ---~~~~~~~~~l~~~--G~~v~~g~~~  271 (307)
                         .....+++.++..  +++|.++...
T Consensus        82 ~n~~~~~~l~~a~~~~~~~~~v~~Ss~~  109 (287)
T 2jl1_A           82 LLIVQHANVVKAARDAGVKHIAYTGYAF  109 (287)
T ss_dssp             HHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred             HHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence               1223344444333  4888888654

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=96.36  E-value=0.031  Score=52.76  Aligned_cols=77  Identities=17%  Similarity=0.150  Sum_probs=49.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEE-eCCc--------------c-H---HHHHHcCCce-EE--eCCC
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSAT-CGSK--------------S-I---DRVLAAGAEQ-AV--DYSS  227 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~-Vi~~-~~~~--------------~-~---~~~~~~g~~~-v~--~~~~  227 (307)
                      .++++.++||+||+|++|+.+++.+...|++ ++.+ .++.              + .   +.+++.|... ++  |.++
T Consensus       247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd  326 (525)
T 3qp9_A          247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTD  326 (525)
T ss_dssp             SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTS
T ss_pred             eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCC
Confidence            3578899999999999999999888888996 5555 4441              1 1   2234456532 22  3333


Q ss_pred             hh-HHHHhc-----CCccEEEECCCC
Q 021831          228 KD-IELAIK-----GKFDAVLDTIGA  247 (307)
Q Consensus       228 ~~-~~~~~~-----~~~dvvid~~g~  247 (307)
                      .+ +...+.     +.+|+||++.|.
T Consensus       327 ~~~v~~~~~~i~~~g~id~vVh~AGv  352 (525)
T 3qp9_A          327 AEAAARLLAGVSDAHPLSAVLHLPPT  352 (525)
T ss_dssp             HHHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHhcCCCcEEEECCcC
Confidence            32 222222     468999999884

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=96.35  E-value=0.0079  Score=45.74  Aligned_cols=93  Identities=20%  Similarity=0.181  Sum_probs=56.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCceEEe--CCChhHHHHh-cCCccEEEECCCCh-h
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVD--YSSKDIELAI-KGKFDAVLDTIGAP-E  249 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~~v~~--~~~~~~~~~~-~~~~dvvid~~g~~-~  249 (307)
                      +++|+|+|+ |.+|...++.+...|.+|+.+.+..+ .+.+.+.+.. ++.  ..+.+..... .+++|++|.+++.. .
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~-~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~   83 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATH-AVIANATEENELLSLGIRNFEYVIVAIGANIQ   83 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSE-EEECCTTCHHHHHTTTGGGCSEEEECCCSCHH
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCE-EEEeCCCCHHHHHhcCCCCCCEEEECCCCchH
Confidence            568999996 99999999999999998887766433 2223334443 333  2222222222 24699999999974 2


Q ss_pred             h---HHHHHhcccCCcEEEEeccC
Q 021831          250 T---ERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       250 ~---~~~~~~~l~~~G~~v~~g~~  270 (307)
                      .   +....+.+.+. +++.....
T Consensus        84 ~~~~~~~~~~~~~~~-~ii~~~~~  106 (144)
T 2hmt_A           84 ASTLTTLLLKELDIP-NIWVKAQN  106 (144)
T ss_dssp             HHHHHHHHHHHTTCS-EEEEECCS
T ss_pred             HHHHHHHHHHHcCCC-eEEEEeCC
Confidence            2   22233344554 66655443

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.35  E-value=0.025  Score=49.12  Aligned_cols=97  Identities=16%  Similarity=0.205  Sum_probs=67.1

Q ss_pred             cccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHH
Q 021831          154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA  233 (307)
Q Consensus       154 ~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~  233 (307)
                      +.+|........++...---.|.+++|+|++..+|.-++.++...|++|+...+.                  ..++.+.
T Consensus       144 ~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~------------------t~~L~~~  205 (301)
T 1a4i_A          144 FIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK------------------TAHLDEE  205 (301)
T ss_dssp             CCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT------------------CSSHHHH
T ss_pred             ccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC------------------cccHHHH
Confidence            4455544455555433222479999999986578999999999999998765321                  1233343


Q ss_pred             hcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       234 ~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      + ..+|+||.++|.+..+  --..+++|..+|.+|...
T Consensus       206 ~-~~ADIVI~Avg~p~~I--~~~~vk~GavVIDVgi~~  240 (301)
T 1a4i_A          206 V-NKGDILVVATGQPEMV--KGEWIKPGAIVIDCGINY  240 (301)
T ss_dssp             H-TTCSEEEECCCCTTCB--CGGGSCTTCEEEECCCBC
T ss_pred             h-ccCCEEEECCCCcccC--CHHHcCCCcEEEEccCCC
Confidence            3 4599999999987432  234578999999999764

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=96.35  E-value=0.022  Score=46.34  Aligned_cols=99  Identities=13%  Similarity=-0.021  Sum_probs=65.5

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCcc-HHHH----HHcCCc--eEEeCCChhHHHHhcCCcc
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKS-IDRV----LAAGAE--QAVDYSSKDIELAIKGKFD  239 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~~~-~~~~----~~~g~~--~v~~~~~~~~~~~~~~~~d  239 (307)
                      ....++++++||-+|+ | .|..+..+++... .+|+++..+.. .+.+    +..+.+  .++..+..+..... +.||
T Consensus        34 ~~l~~~~~~~vLDiG~-G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~D  110 (204)
T 3e05_A           34 SKLRLQDDLVMWDIGA-G-SASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDL-PDPD  110 (204)
T ss_dssp             HHTTCCTTCEEEEETC-T-TCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTS-CCCS
T ss_pred             HHcCCCCCCEEEEECC-C-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcC-CCCC
Confidence            3667889999999994 4 5888999998853 59999865543 3333    334432  23333221111111 5699


Q ss_pred             EEEECCCC---hhhHHHHHhcccCCcEEEEecc
Q 021831          240 AVLDTIGA---PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       240 vvid~~g~---~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      +|+.....   ...+..+.+.|+++|+++....
T Consensus       111 ~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  143 (204)
T 3e05_A          111 RVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV  143 (204)
T ss_dssp             EEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             EEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence            99987652   3467888999999999998654

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=96.35  E-value=0.0027  Score=54.24  Aligned_cols=93  Identities=19%  Similarity=0.169  Sum_probs=63.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCcc-HHHHHHcCCc-eEEeCCChhHHHHhcCCccEEEECCCChh
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKS-IDRVLAAGAE-QAVDYSSKDIELAIKGKFDAVLDTIGAPE  249 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~~~-~~~~~~~g~~-~v~~~~~~~~~~~~~~~~dvvid~~g~~~  249 (307)
                      .++.+||.+|. |. |..+..+++.. |.+|+++..++. .+.+++.+.. .+...+..++. ...+.||+|+.... ..
T Consensus        84 ~~~~~vLdiG~-G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~-~~  159 (269)
T 1p91_A           84 DKATAVLDIGC-GE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLP-FSDTSMDAIIRIYA-PC  159 (269)
T ss_dssp             TTCCEEEEETC-TT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCS-BCTTCEEEEEEESC-CC
T ss_pred             CCCCEEEEECC-CC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCC-CCCCceeEEEEeCC-hh
Confidence            67899999994 55 99999999876 679999965543 4555554432 23333222211 01147999996544 44


Q ss_pred             hHHHHHhcccCCcEEEEecc
Q 021831          250 TERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~g~  269 (307)
                      .+..+.+.|+|||+++....
T Consensus       160 ~l~~~~~~L~pgG~l~~~~~  179 (269)
T 1p91_A          160 KAEELARVVKPGGWVITATP  179 (269)
T ss_dssp             CHHHHHHHEEEEEEEEEEEE
T ss_pred             hHHHHHHhcCCCcEEEEEEc
Confidence            78999999999999988754

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=96.32  E-value=0.0087  Score=50.58  Aligned_cols=100  Identities=21%  Similarity=0.200  Sum_probs=67.4

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCc-cHHHH----HHcCCceEEeCCChhHHHHhc-CCcc
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSK-SIDRV----LAAGAEQAVDYSSKDIELAIK-GKFD  239 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~-~~~~~----~~~g~~~v~~~~~~~~~~~~~-~~~d  239 (307)
                      ....++++++||-.|+ | .|..+..+++..  +.+|+++..++ ..+.+    +..+....++....++.+... +.||
T Consensus        87 ~~~~~~~~~~vldiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D  164 (255)
T 3mb5_A           87 AYAGISPGDFIVEAGV-G-SGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEENVD  164 (255)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCCSEE
T ss_pred             HhhCCCCCCEEEEecC-C-chHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCCCcC
Confidence            4678899999999994 4 488889999885  46999986543 33333    334543211111122222233 4699


Q ss_pred             EEEECCCCh-hhHHHHHhcccCCcEEEEecc
Q 021831          240 AVLDTIGAP-ETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       240 vvid~~g~~-~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      +|+...+.. ..+..+.+.|+++|+++....
T Consensus       165 ~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  195 (255)
T 3mb5_A          165 HVILDLPQPERVVEHAAKALKPGGFFVAYTP  195 (255)
T ss_dssp             EEEECSSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             EEEECCCCHHHHHHHHHHHcCCCCEEEEEEC
Confidence            999887765 478999999999999998754

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.29  E-value=0.017  Score=50.54  Aligned_cols=96  Identities=17%  Similarity=0.155  Sum_probs=64.3

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHH----HcCCc---eEEeCCChhHHHHhcCCcc
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVL----AAGAE---QAVDYSSKDIELAIKGKFD  239 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~----~~g~~---~v~~~~~~~~~~~~~~~~d  239 (307)
                      ....++++++||-+|. | .|..+..+++..|++|+++..+.. .+.++    ..+..   .+...+..++    .+.||
T Consensus        84 ~~~~~~~~~~vLDiGc-G-~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~fD  157 (318)
T 2fk8_A           84 DKLDLKPGMTLLDIGC-G-WGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF----AEPVD  157 (318)
T ss_dssp             TTSCCCTTCEEEEESC-T-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC----CCCCS
T ss_pred             HhcCCCCcCEEEEEcc-c-chHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC----CCCcC
Confidence            3556789999999994 4 488888999888999999966544 33333    23432   2222222221    26799


Q ss_pred             EEEEC-----CCC---hhhHHHHHhcccCCcEEEEecc
Q 021831          240 AVLDT-----IGA---PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       240 vvid~-----~g~---~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      +|+..     .+.   ...+..+.+.|+|||+++....
T Consensus       158 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  195 (318)
T 2fk8_A          158 RIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS  195 (318)
T ss_dssp             EEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             EEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence            99876     432   2366788899999999987553

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=96.29  E-value=0.081  Score=49.75  Aligned_cols=76  Identities=22%  Similarity=0.314  Sum_probs=51.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCcc----H-H---HHHHcCCce-E--EeCCChh-HHHHhc-CC
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS----I-D---RVLAAGAEQ-A--VDYSSKD-IELAIK-GK  237 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~----~-~---~~~~~g~~~-v--~~~~~~~-~~~~~~-~~  237 (307)
                      ++++.++||+|++|++|..+++.+...|+ +|+.+.++..    . +   .+++.|... +  .|..+.+ +.+.+. +.
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~  335 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYP  335 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCC
Confidence            56789999999999999999998888999 6777766532    1 1   133445432 2  2334432 333333 57


Q ss_pred             ccEEEECCCC
Q 021831          238 FDAVLDTIGA  247 (307)
Q Consensus       238 ~dvvid~~g~  247 (307)
                      +|+||++.|.
T Consensus       336 ld~VVh~AGv  345 (511)
T 2z5l_A          336 PNAVFHTAGI  345 (511)
T ss_dssp             CSEEEECCCC
T ss_pred             CcEEEECCcc
Confidence            9999999884

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=96.26  E-value=0.033  Score=44.75  Aligned_cols=95  Identities=13%  Similarity=0.092  Sum_probs=60.3

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcC----------CEEEEEeCCccHHHHHHcCCceEE-eCC--ChhHHHH--
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASG----------CHVSATCGSKSIDRVLAAGAEQAV-DYS--SKDIELA--  233 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G----------~~Vi~~~~~~~~~~~~~~g~~~v~-~~~--~~~~~~~--  233 (307)
                      ...++++++||-+|+ |. |..+..+++..|          .+|+++..++...    ......+ ..+  ..+..+.  
T Consensus        17 ~~~~~~~~~vLDlGc-G~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~----~~~~~~~~~~d~~~~~~~~~~~   90 (196)
T 2nyu_A           17 HQILRPGLRVLDCGA-AP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP----LEGATFLCPADVTDPRTSQRIL   90 (196)
T ss_dssp             HCCCCTTCEEEEETC-CS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC----CTTCEEECSCCTTSHHHHHHHH
T ss_pred             cCCCCCCCEEEEeCC-CC-CHHHHHHHHHhccccccccCCCceEEEEechhccc----CCCCeEEEeccCCCHHHHHHHH
Confidence            344688999999994 55 999999999876          6898886554211    1111233 222  2222211  


Q ss_pred             --hc-CCccEEEE-----CCCCh------------hhHHHHHhcccCCcEEEEecc
Q 021831          234 --IK-GKFDAVLD-----TIGAP------------ETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       234 --~~-~~~dvvid-----~~g~~------------~~~~~~~~~l~~~G~~v~~g~  269 (307)
                        .. +.||+|+.     +++..            ..+..+.+.|+|||+++..-.
T Consensus        91 ~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  146 (196)
T 2nyu_A           91 EVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW  146 (196)
T ss_dssp             HHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             HhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence              22 37999994     33432            356778899999999988643

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=96.24  E-value=0.013  Score=50.71  Aligned_cols=91  Identities=20%  Similarity=0.265  Sum_probs=57.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-------cH-HHH---HHcCCceE-EeCCChhHHHHhcCCccEEE
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-------SI-DRV---LAAGAEQA-VDYSSKDIELAIKGKFDAVL  242 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-------~~-~~~---~~~g~~~v-~~~~~~~~~~~~~~~~dvvi  242 (307)
                      +.+|||.||+|.+|..+++.+...|.+|++++++.       +. ..+   ...+...+ .|..+.+.......++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   81 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence            46799999999999999998888899998887764       21 112   23354322 24444332222235799999


Q ss_pred             ECCCCh--hhHHHHHhcccC-C--cEEE
Q 021831          243 DTIGAP--ETERLGLNFLKR-G--GHYM  265 (307)
Q Consensus       243 d~~g~~--~~~~~~~~~l~~-~--G~~v  265 (307)
                      ++++..  .....+++.++. +  .++|
T Consensus        82 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           82 CAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             ECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             ECCcccccccHHHHHHHHHhcCCceEEe
Confidence            998853  233444444433 2  4776

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=96.23  E-value=0.047  Score=51.16  Aligned_cols=75  Identities=19%  Similarity=0.315  Sum_probs=49.6

Q ss_pred             CCC--CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCc----cH----HHHHHcCCceE-E--eCCChh-HHHHhc--
Q 021831          173 SEG--QRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSK----SI----DRVLAAGAEQA-V--DYSSKD-IELAIK--  235 (307)
Q Consensus       173 ~~g--~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~----~~----~~~~~~g~~~v-~--~~~~~~-~~~~~~--  235 (307)
                      +++  .++||+|++|++|..+++.+...|+ +++.+.++.    ..    +.+++.|.... +  |..+.+ +.+.+.  
T Consensus       235 ~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i  314 (496)
T 3mje_A          235 RPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAEL  314 (496)
T ss_dssp             CCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            455  8999999999999999998888999 777776642    11    22445565322 2  333332 222222  


Q ss_pred             ---CCccEEEECCCC
Q 021831          236 ---GKFDAVLDTIGA  247 (307)
Q Consensus       236 ---~~~dvvid~~g~  247 (307)
                         +++|++|++.|.
T Consensus       315 ~~~g~ld~vVh~AGv  329 (496)
T 3mje_A          315 PEDAPLTAVFHSAGV  329 (496)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             HHhCCCeEEEECCcc
Confidence               368999999884

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=96.22  E-value=0.0093  Score=53.21  Aligned_cols=97  Identities=18%  Similarity=0.151  Sum_probs=61.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHH--cCCEEEEEeCCcc--------------HHHHHHcCCc-eEEeCCChhHHHHh-c
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVA--SGCHVSATCGSKS--------------IDRVLAAGAE-QAVDYSSKDIELAI-K  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~--~G~~Vi~~~~~~~--------------~~~~~~~g~~-~v~~~~~~~~~~~~-~  235 (307)
                      .+.+|||+||+|.+|..+++.+..  .|.+|+++.+...              .......+.. ...|..+.+..+.+ .
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   88 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEK   88 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhc
Confidence            468999999999999999988888  8999999976433              0111111111 12244444444444 4


Q ss_pred             CCccEEEECCCChh---------------hHHHHHhcc-cCCcEEEEeccC
Q 021831          236 GKFDAVLDTIGAPE---------------TERLGLNFL-KRGGHYMTLHGE  270 (307)
Q Consensus       236 ~~~dvvid~~g~~~---------------~~~~~~~~l-~~~G~~v~~g~~  270 (307)
                      .++|+||++.+...               ....+++.+ +.++++|.++..
T Consensus        89 ~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~  139 (362)
T 3sxp_A           89 LHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSA  139 (362)
T ss_dssp             SCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEG
T ss_pred             cCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcH
Confidence            68999999988421               112333333 346778888763

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=96.21  E-value=0.032  Score=49.77  Aligned_cols=97  Identities=16%  Similarity=0.119  Sum_probs=60.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHH---HHHHcCCceEE--e-CCChhHHHHhcCCccEEEECCCCh
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSID---RVLAAGAEQAV--D-YSSKDIELAIKGKFDAVLDTIGAP  248 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~---~~~~~g~~~v~--~-~~~~~~~~~~~~~~dvvid~~g~~  248 (307)
                      +.+|||+||+|.+|..+++.+...|.+|+++.++....   .+.......++  | .++.+.......++|+||.+.+..
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~~   84 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQ   84 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCST
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCCC
Confidence            56899999999999999988888899999987765432   23322122233  3 334332222235699999877642


Q ss_pred             -----hhHHHHHhcccC-C--cEEEEeccCc
Q 021831          249 -----ETERLGLNFLKR-G--GHYMTLHGET  271 (307)
Q Consensus       249 -----~~~~~~~~~l~~-~--G~~v~~g~~~  271 (307)
                           .....+++.++. +  +++|.++...
T Consensus        85 ~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~  115 (352)
T 1xgk_A           85 AGDEIAIGKDLADAAKRAGTIQHYIYSSMPD  115 (352)
T ss_dssp             TSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred             CcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence                 112334444433 3  5999988764

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=96.21  E-value=0.0083  Score=50.66  Aligned_cols=99  Identities=15%  Similarity=0.105  Sum_probs=67.1

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCc-cHHHHH----Hc-CCc--eEEeCCChhHHHHhc-C
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSK-SIDRVL----AA-GAE--QAVDYSSKDIELAIK-G  236 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~-~~~~~~----~~-g~~--~v~~~~~~~~~~~~~-~  236 (307)
                      ....++++++||-.|+ | .|..+..+++..  +.+|+++..++ ..+.++    .. |.+  .+...+..+.  .+. +
T Consensus        90 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~--~~~~~  165 (258)
T 2pwy_A           90 TLLDLAPGMRVLEAGT-G-SGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA--ELEEA  165 (258)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC--CCCTT
T ss_pred             HHcCCCCCCEEEEECC-C-cCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc--CCCCC
Confidence            3667899999999994 4 488889999885  46999986544 333333    22 532  2222221111  022 4


Q ss_pred             CccEEEECCCCh-hhHHHHHhcccCCcEEEEeccC
Q 021831          237 KFDAVLDTIGAP-ETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       237 ~~dvvid~~g~~-~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      .||+|+...+.. ..+..+.+.|+++|+++.+...
T Consensus       166 ~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~  200 (258)
T 2pwy_A          166 AYDGVALDLMEPWKVLEKAALALKPDRFLVAYLPN  200 (258)
T ss_dssp             CEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEESC
T ss_pred             CcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence            699999877765 5788999999999999987643

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=96.21  E-value=0.024  Score=48.99  Aligned_cols=96  Identities=19%  Similarity=0.099  Sum_probs=60.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCccH---HHHHHcCCceE-EeCCChhHHHHhcCCccEEEECCCChh
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI---DRVLAAGAEQA-VDYSSKDIELAIKGKFDAVLDTIGAPE  249 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~~~~---~~~~~~g~~~v-~~~~~~~~~~~~~~~~dvvid~~g~~~  249 (307)
                      ..+|||+||+|.+|..+++.+...| .+|++++++...   ..+...+...+ .|..+.+.......++|+||.+.+...
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~   84 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWE   84 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCCc
Confidence            4689999999999999998888888 899999876442   22334454322 244443322223357999999987421


Q ss_pred             ---------hHHHHHhcccC--CcEEEEeccC
Q 021831          250 ---------TERLGLNFLKR--GGHYMTLHGE  270 (307)
Q Consensus       250 ---------~~~~~~~~l~~--~G~~v~~g~~  270 (307)
                               ....+++.++.  -+++|..+..
T Consensus        85 ~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~  116 (299)
T 2wm3_A           85 SCSQEQEVKQGKLLADLARRLGLHYVVYSGLE  116 (299)
T ss_dssp             HTCHHHHHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred             cccchHHHHHHHHHHHHHHHcCCCEEEEEcCc
Confidence                     12234444432  3588886654

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.20  E-value=0.015  Score=51.96  Aligned_cols=88  Identities=19%  Similarity=0.215  Sum_probs=64.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhh---
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET---  250 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~---  250 (307)
                      .|.+|.|+| .|.+|..+++.++.+|++|++..+..+.+.+.+.|...+     .++.+.+ ...|+|+-+++....   
T Consensus       159 ~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~-----~~l~ell-~~aDiV~l~~Plt~~t~~  231 (352)
T 3gg9_A          159 KGQTLGIFG-YGKIGQLVAGYGRAFGMNVLVWGRENSKERARADGFAVA-----ESKDALF-EQSDVLSVHLRLNDETRS  231 (352)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHTTCEEC-----SSHHHHH-HHCSEEEECCCCSTTTTT
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHhCCCEEEEECCCCCHHHHHhcCceEe-----CCHHHHH-hhCCEEEEeccCcHHHHH
Confidence            478999999 699999999999999999999877654455666776422     1233322 237999998874321   


Q ss_pred             --HHHHHhcccCCcEEEEec
Q 021831          251 --ERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       251 --~~~~~~~l~~~G~~v~~g  268 (307)
                        -...+..|+++..+|.++
T Consensus       232 li~~~~l~~mk~gailIN~a  251 (352)
T 3gg9_A          232 IITVADLTRMKPTALFVNTS  251 (352)
T ss_dssp             CBCHHHHTTSCTTCEEEECS
T ss_pred             hhCHHHHhhCCCCcEEEECC
Confidence              245678899999999998

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=96.18  E-value=0.012  Score=50.28  Aligned_cols=95  Identities=13%  Similarity=0.109  Sum_probs=59.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCcc-HHHHHHcCCceE-EeCCChhHHHHhcCCccEEEECCCCh----
Q 021831          177 RLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKS-IDRVLAAGAEQA-VDYSSKDIELAIKGKFDAVLDTIGAP----  248 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~~-~~~~~~~g~~~v-~~~~~~~~~~~~~~~~dvvid~~g~~----  248 (307)
                      +|||+||+|.+|...++.+...  |.+|+++.++.. ...+...+...+ .|..+.+.......++|+||.+.+..    
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~   80 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQR   80 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-------
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCchHH
Confidence            4899999999999999988877  889998877543 233333444322 24444333333335799999998742    


Q ss_pred             -hhHHHHHhcccC--CcEEEEeccCc
Q 021831          249 -ETERLGLNFLKR--GGHYMTLHGET  271 (307)
Q Consensus       249 -~~~~~~~~~l~~--~G~~v~~g~~~  271 (307)
                       .....+++.++.  -+++|.++...
T Consensus        81 ~~~~~~l~~a~~~~~~~~~v~~Ss~~  106 (286)
T 2zcu_A           81 APQHRNVINAAKAAGVKFIAYTSLLH  106 (286)
T ss_dssp             -CHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred             HHHHHHHHHHHHHcCCCEEEEECCCC
Confidence             123444444432  25888887653

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.14  E-value=0.011  Score=53.03  Aligned_cols=94  Identities=16%  Similarity=0.105  Sum_probs=63.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhHHHH
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLG  254 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~~~~  254 (307)
                      .+|+|+|| |.+|..+++.+.. ...|.....+. +.+.+++......+|.++.+.......++|+||++++.......+
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~~~~v~   94 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGFKSI   94 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGGHHHHH
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCcccchHH
Confidence            47999997 9999998888754 35666655443 334444433233345444433333336799999999987566667


Q ss_pred             HhcccCCcEEEEeccCc
Q 021831          255 LNFLKRGGHYMTLHGET  271 (307)
Q Consensus       255 ~~~l~~~G~~v~~g~~~  271 (307)
                      -.|++.+=+++++....
T Consensus        95 ~~~~~~g~~yvD~s~~~  111 (365)
T 3abi_A           95 KAAIKSKVDMVDVSFMP  111 (365)
T ss_dssp             HHHHHHTCEEEECCCCS
T ss_pred             HHHHhcCcceEeeeccc
Confidence            77888999999988654

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.12  E-value=0.012  Score=50.64  Aligned_cols=96  Identities=15%  Similarity=0.106  Sum_probs=63.4

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHH----HcCCc---eEEeCCChhHHHHhcCCcc
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVL----AAGAE---QAVDYSSKDIELAIKGKFD  239 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~----~~g~~---~v~~~~~~~~~~~~~~~~d  239 (307)
                      ....++++++||-+|.  +.|..+..+++..|++|+++..+.. .+.++    ..+..   .+...+..+    +.+.||
T Consensus        58 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~----~~~~fD  131 (287)
T 1kpg_A           58 GKLGLQPGMTLLDVGC--GWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ----FDEPVD  131 (287)
T ss_dssp             TTTTCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG----CCCCCS
T ss_pred             HHcCCCCcCEEEEECC--cccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh----CCCCee
Confidence            3556789999999993  4588888999888999999966543 33332    23321   222222222    126799


Q ss_pred             EEEEC-----CCC---hhhHHHHHhcccCCcEEEEecc
Q 021831          240 AVLDT-----IGA---PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       240 vvid~-----~g~---~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      +|+..     .+.   ...+..+.+.|+|||+++....
T Consensus       132 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  169 (287)
T 1kpg_A          132 RIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI  169 (287)
T ss_dssp             EEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             EEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence            99875     221   2367888899999999987553

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.11  E-value=0.011  Score=47.66  Aligned_cols=99  Identities=14%  Similarity=0.119  Sum_probs=64.1

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCcc-HHH----HHHcCC---ceEEeCCChhHHHHhcCCc
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKS-IDR----VLAAGA---EQAVDYSSKDIELAIKGKF  238 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G--~~Vi~~~~~~~-~~~----~~~~g~---~~v~~~~~~~~~~~~~~~~  238 (307)
                      ...++++++||-.|. | .|..+..+++..+  .+|+++..++. .+.    ++..+.   -.++..+..++.....+.|
T Consensus        17 ~~~~~~~~~vLDlGc-G-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~f   94 (197)
T 3eey_A           17 KMFVKEGDTVVDATC-G-NGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPV   94 (197)
T ss_dssp             HHHCCTTCEEEESCC-T-TSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCE
T ss_pred             HhcCCCCCEEEEcCC-C-CCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCc
Confidence            346788999999984 3 4888888888864  58999865543 333    334443   1233333223322223579


Q ss_pred             cEEEECCCC---------------hhhHHHHHhcccCCcEEEEecc
Q 021831          239 DAVLDTIGA---------------PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       239 dvvid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      |+|+...+-               ...+..+.+.|+++|+++.+..
T Consensus        95 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  140 (197)
T 3eey_A           95 KAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY  140 (197)
T ss_dssp             EEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             eEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence            999866532               2367889999999999988754

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.10  E-value=0.024  Score=48.96  Aligned_cols=98  Identities=16%  Similarity=0.197  Sum_probs=67.1

Q ss_pred             ccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHH
Q 021831          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (307)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (307)
                      ...++........++...---.|.+++|+|++..+|.-++.++...|++|....+..                  .++.+
T Consensus       137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t------------------~~L~~  198 (288)
T 1b0a_A          137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT------------------KNLRH  198 (288)
T ss_dssp             SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC------------------SCHHH
T ss_pred             CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc------------------hhHHH
Confidence            344555555555565333234799999999866789999999999999887763221                  12222


Q ss_pred             HhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       233 ~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .+ ..+|+||.++|.+..+  --..+++|..+|.+|.+.
T Consensus       199 ~~-~~ADIVI~Avg~p~lI--~~~~vk~GavVIDVgi~r  234 (288)
T 1b0a_A          199 HV-ENADLLIVAVGKPGFI--PGDWIKEGAIVIDVGINR  234 (288)
T ss_dssp             HH-HHCSEEEECSCCTTCB--CTTTSCTTCEEEECCCEE
T ss_pred             Hh-ccCCEEEECCCCcCcC--CHHHcCCCcEEEEccCCc
Confidence            22 2389999999987432  224578999999999764

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=96.10  E-value=0.011  Score=52.33  Aligned_cols=92  Identities=20%  Similarity=0.076  Sum_probs=58.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCce-EEeCCChhHHHHhcCCccEEEECCCChh--
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQ-AVDYSSKDIELAIKGKFDAVLDTIGAPE--  249 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~dvvid~~g~~~--  249 (307)
                      ..+.+|||+||+|.+|..+++.+...|.+|+++.+....     .+... ..|..+.+....+..++|+||.+.+...  
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~   91 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFMSWA   91 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----SCCSEEESCTTCHHHHHHHHTTCSEEEECCCCCCSS
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----CCccEEecCcCCHHHHHHHHhCCCEEEECCcccCcc
Confidence            457899999999999999999999999999999776543     23322 2234443322333357999999887420  


Q ss_pred             -------------hHHHHHhcccC--CcEEEEecc
Q 021831          250 -------------TERLGLNFLKR--GGHYMTLHG  269 (307)
Q Consensus       250 -------------~~~~~~~~l~~--~G~~v~~g~  269 (307)
                                   ....+++.++.  -+++|.++.
T Consensus        92 ~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS  126 (347)
T 4id9_A           92 PADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS  126 (347)
T ss_dssp             GGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence                         11234444433  358998886

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=96.07  E-value=0.034  Score=45.04  Aligned_cols=68  Identities=19%  Similarity=0.336  Sum_probs=43.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHcCCceEE--eCCChh-HHHHhc--CCccEEEECCCC
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAAGAEQAV--DYSSKD-IELAIK--GKFDAVLDTIGA  247 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~g~~~v~--~~~~~~-~~~~~~--~~~dvvid~~g~  247 (307)
                      ++||+||+|.+|...++.+...  +|+.+.++.. .+. ..+++. ..+  |..+.+ +.+.+.  +++|++|++.|.
T Consensus         2 ~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~   76 (207)
T 2yut_A            2 RVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVHAVGK   76 (207)
T ss_dssp             EEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEECCCC
T ss_pred             EEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence            6899999999999988877665  8888877543 222 233332 232  333332 333333  489999999874

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.06  E-value=0.041  Score=48.30  Aligned_cols=74  Identities=18%  Similarity=0.190  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--HHHH---HH-cCC-ceEE--eCCChh-HHHHhc-CCccEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDRV---LA-AGA-EQAV--DYSSKD-IELAIK-GKFDAVL  242 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--~~~~---~~-~g~-~~v~--~~~~~~-~~~~~~-~~~dvvi  242 (307)
                      .+.+|||+||+|.+|..+++.+...|++|+++.+...  ...+   .. .+. ...+  |..+.+ +.+.+. .++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            4678999999999999999999999999999866432  1222   11 122 2222  333332 333333 4799999


Q ss_pred             ECCCC
Q 021831          243 DTIGA  247 (307)
Q Consensus       243 d~~g~  247 (307)
                      ++.+.
T Consensus        84 h~A~~   88 (341)
T 3enk_A           84 HFAAL   88 (341)
T ss_dssp             ECCCC
T ss_pred             ECccc
Confidence            99885

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=96.06  E-value=0.033  Score=47.89  Aligned_cols=98  Identities=15%  Similarity=0.229  Sum_probs=67.8

Q ss_pred             ccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCccHHHHHHcCCceEEeCCChhH
Q 021831          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSIDRVLAAGAEQAVDYSSKDI  230 (307)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~  230 (307)
                      .+.++....+...++...---.|.+++|+|++..+|..+++++...  |++|+...+..                  .++
T Consensus       136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t------------------~~L  197 (281)
T 2c2x_A          136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT------------------RDL  197 (281)
T ss_dssp             CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC------------------SCH
T ss_pred             CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch------------------hHH
Confidence            3445555555556654432247999999998656899999999988  88887653221                  233


Q ss_pred             HHHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          231 ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       231 ~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .+.+ ..+|+||.++|.+..  ---..+++|..+|.+|.+.
T Consensus       198 ~~~~-~~ADIVI~Avg~p~~--I~~~~vk~GavVIDVgi~r  235 (281)
T 2c2x_A          198 PALT-RQADIVVAAVGVAHL--LTADMVRPGAAVIDVGVSR  235 (281)
T ss_dssp             HHHH-TTCSEEEECSCCTTC--BCGGGSCTTCEEEECCEEE
T ss_pred             HHHH-hhCCEEEECCCCCcc--cCHHHcCCCcEEEEccCCC
Confidence            4433 459999999998843  2234578999999999775

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=96.06  E-value=0.021  Score=49.73  Aligned_cols=92  Identities=15%  Similarity=0.074  Sum_probs=57.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceE-EeCCChhHHHHhcCCccEEEECCCChh-----
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQA-VDYSSKDIELAIKGKFDAVLDTIGAPE-----  249 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~dvvid~~g~~~-----  249 (307)
                      .+|||+||+|.+|...++.+...|.+|+++.+......+.  +...+ .|.. .+....+..++|+||.+++...     
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~~~~   79 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAIN--DYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQGKI   79 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSSSCG
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcccCC--ceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCCChH
Confidence            6899999999999999999999999999998764332222  33221 2333 3322223358999999987421     


Q ss_pred             --------hHHHHHhcccCC--cEEEEeccC
Q 021831          250 --------TERLGLNFLKRG--GHYMTLHGE  270 (307)
Q Consensus       250 --------~~~~~~~~l~~~--G~~v~~g~~  270 (307)
                              ....+++.++..  .++|.++..
T Consensus        80 ~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~  110 (311)
T 3m2p_A           80 SEFHDNEILTQNLYDACYENNISNIVYASTI  110 (311)
T ss_dssp             GGTHHHHHHHHHHHHHHHHTTCCEEEEEEEG
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCEEEEEccH
Confidence                    123344444333  478887753

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=96.01  E-value=0.024  Score=49.22  Aligned_cols=89  Identities=18%  Similarity=0.322  Sum_probs=56.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc------HHHHH---HcCCceEE--eCCChh-HHHHhcCCccEEE
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS------IDRVL---AAGAEQAV--DYSSKD-IELAIKGKFDAVL  242 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~------~~~~~---~~g~~~v~--~~~~~~-~~~~~~~~~dvvi  242 (307)
                      ..+|||+||+|.+|..+++.+...|.+|++++++..      ...+.   ..+.. ++  |..+.+ +.+.+ .++|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~l~~~~-~~~d~vi   81 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAK-LIEASLDDHQRLVDAL-KQVDVVI   81 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCE-EECCCSSCHHHHHHHH-TTCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeE-EEeCCCCCHHHHHHHH-hCCCEEE
Confidence            357999999999999999999888999999877632      11222   23332 33  344433 33333 5799999


Q ss_pred             ECCCCh------hhHHHHHhcccCC---cEEE
Q 021831          243 DTIGAP------ETERLGLNFLKRG---GHYM  265 (307)
Q Consensus       243 d~~g~~------~~~~~~~~~l~~~---G~~v  265 (307)
                      .+++..      .....+++.++..   .++|
T Consensus        82 ~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v  113 (313)
T 1qyd_A           82 SALAGGVLSHHILEQLKLVEAIKEAGNIKRFL  113 (313)
T ss_dssp             ECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred             ECCccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence            998743      1334444544433   4777

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.01  E-value=0.0078  Score=52.97  Aligned_cols=117  Identities=15%  Similarity=0.180  Sum_probs=73.3

Q ss_pred             ccccchHHHHHHHHHHH--------cC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--HHHHHHcCCc-
Q 021831          153 SAIPFAALTAWRALKCA--------AR-MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDRVLAAGAE-  220 (307)
Q Consensus       153 a~~~~~~~ta~~~l~~~--------~~-~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--~~~~~~~g~~-  220 (307)
                      ...++....+...++..        .. --.|.+++|+|++..+|..+++++...|++|+...++..  ..+..+++.. 
T Consensus       146 ~~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~  225 (320)
T 1edz_A          146 SILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNK  225 (320)
T ss_dssp             CCCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCC
T ss_pred             CcCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhc
Confidence            45566666666666642        22 236899999997556799999999999999877655421  1112222211 


Q ss_pred             eEE---e-CCChhHHHHhcCCccEEEECCCChhh-HHHHHhcccCCcEEEEeccCcc
Q 021831          221 QAV---D-YSSKDIELAIKGKFDAVLDTIGAPET-ERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       221 ~v~---~-~~~~~~~~~~~~~~dvvid~~g~~~~-~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      +..   . .+..++.+.+ ..+|+||.++|.+.. +.  -..+++|-.++.+|.+..
T Consensus       226 ~~~t~~~~t~~~~L~e~l-~~ADIVIsAtg~p~~vI~--~e~vk~GavVIDVgi~rD  279 (320)
T 1edz_A          226 HHVEDLGEYSEDLLKKCS-LDSDVVITGVPSENYKFP--TEYIKEGAVCINFACTKN  279 (320)
T ss_dssp             CEEEEEEECCHHHHHHHH-HHCSEEEECCCCTTCCBC--TTTSCTTEEEEECSSSCC
T ss_pred             ccccccccccHhHHHHHh-ccCCEEEECCCCCcceeC--HHHcCCCeEEEEcCCCcc
Confidence            111   0 1113444443 359999999998733 22  234789999999998753

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=95.98  E-value=0.0063  Score=51.04  Aligned_cols=73  Identities=12%  Similarity=0.311  Sum_probs=49.9

Q ss_pred             CCCEEEEEcC----------------CchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCC-hhHHHHhc-
Q 021831          174 EGQRLLVLGG----------------GGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSS-KDIELAIK-  235 (307)
Q Consensus       174 ~g~~VlI~Ga----------------~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~~-  235 (307)
                      .|.+|||+||                +|.+|.+.++.+..+|++|+.+.+..........+. .+++... .++.+.+. 
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~~~~~~-~~~~v~s~~em~~~v~~   80 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPEPHPNL-SIREITNTKDLLIEMQE   80 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCCCCTTE-EEEECCSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCCCe-EEEEHhHHHHHHHHHHH
Confidence            5789999999                788999999999999999999877543211000122 3445443 33444333 


Q ss_pred             --CCccEEEECCCC
Q 021831          236 --GKFDAVLDTIGA  247 (307)
Q Consensus       236 --~~~dvvid~~g~  247 (307)
                        ++.|++|.+.+-
T Consensus        81 ~~~~~Dili~aAAv   94 (232)
T 2gk4_A           81 RVQDYQVLIHSMAV   94 (232)
T ss_dssp             HGGGCSEEEECSBC
T ss_pred             hcCCCCEEEEcCcc
Confidence              579999999874

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=95.98  E-value=0.021  Score=47.19  Aligned_cols=98  Identities=18%  Similarity=0.208  Sum_probs=64.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcC------CEEEEEeCCcc-HHHH----HHcC-----C--ceEEeCCChh-HH
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASG------CHVSATCGSKS-IDRV----LAAG-----A--EQAVDYSSKD-IE  231 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G------~~Vi~~~~~~~-~~~~----~~~g-----~--~~v~~~~~~~-~~  231 (307)
                      .++++++||-+|+ | .|..+..+++..+      .+|+++..+.. .+.+    ...+     .  -.++..+..+ +.
T Consensus        77 ~~~~~~~VLdiG~-G-~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~  154 (227)
T 2pbf_A           77 VLKPGSRAIDVGS-G-SGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNE  154 (227)
T ss_dssp             TSCTTCEEEEESC-T-TSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCH
T ss_pred             hCCCCCEEEEECC-C-CCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccc
Confidence            5789999999994 4 3888888998876      58999865543 2322    3333     1  2333333222 10


Q ss_pred             H--HhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          232 L--AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       232 ~--~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      +  ...+.||+|+...........+.+.|+++|+++..-.+
T Consensus       155 ~~~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~~  195 (227)
T 2pbf_A          155 EEKKELGLFDAIHVGASASELPEILVDLLAENGKLIIPIEE  195 (227)
T ss_dssp             HHHHHHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEEE
T ss_pred             ccCccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEcc
Confidence            0  11257999998877665678889999999999877553

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=95.97  E-value=0.039  Score=49.50  Aligned_cols=87  Identities=15%  Similarity=0.183  Sum_probs=65.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhh---
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET---  250 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~---  250 (307)
                      .|.+|.|+| .|.+|..+++.++.+|++|++..+....+.+.+.|...      .++.+.+ ...|+|+-+++....   
T Consensus       175 ~gktvGIIG-lG~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~------~~l~ell-~~aDvV~l~~Plt~~T~~  246 (365)
T 4hy3_A          175 AGSEIGIVG-FGDLGKALRRVLSGFRARIRVFDPWLPRSMLEENGVEP------ASLEDVL-TKSDFIFVVAAVTSENKR  246 (365)
T ss_dssp             SSSEEEEEC-CSHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHTTCEE------CCHHHHH-HSCSEEEECSCSSCC---
T ss_pred             CCCEEEEec-CCcccHHHHHhhhhCCCEEEEECCCCCHHHHhhcCeee------CCHHHHH-hcCCEEEEcCcCCHHHHh
Confidence            378999999 69999999999999999999987765555566677542      1333333 348999998775321   


Q ss_pred             --HHHHHhcccCCcEEEEec
Q 021831          251 --ERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       251 --~~~~~~~l~~~G~~v~~g  268 (307)
                        -...+..|++++.+|.++
T Consensus       247 li~~~~l~~mk~gailIN~a  266 (365)
T 4hy3_A          247 FLGAEAFSSMRRGAAFILLS  266 (365)
T ss_dssp             CCCHHHHHTSCTTCEEEECS
T ss_pred             hcCHHHHhcCCCCcEEEECc
Confidence              145677899999999988

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=95.94  E-value=0.011  Score=49.33  Aligned_cols=71  Identities=18%  Similarity=0.351  Sum_probs=49.4

Q ss_pred             CCCEEEEEcC----------------CchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCCh-hHHHHhc-
Q 021831          174 EGQRLLVLGG----------------GGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK-DIELAIK-  235 (307)
Q Consensus       174 ~g~~VlI~Ga----------------~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~-  235 (307)
                      .|.+|||+||                +|.+|.+.++.+...|++|+.+.+......  ..|. .+.+.... ++.+.+. 
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~~--~~g~-~~~dv~~~~~~~~~v~~   83 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPT--PPFV-KRVDVMTALEMEAAVNA   83 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC--CTTE-EEEECCSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccccc--CCCC-eEEccCcHHHHHHHHHH
Confidence            4889999999                589999999999999999988765432211  1122 34555542 3333332 


Q ss_pred             --CCccEEEECCCC
Q 021831          236 --GKFDAVLDTIGA  247 (307)
Q Consensus       236 --~~~dvvid~~g~  247 (307)
                        ++.|++|++.|.
T Consensus        84 ~~~~~Dili~~Aav   97 (226)
T 1u7z_A           84 SVQQQNIFIGCAAV   97 (226)
T ss_dssp             HGGGCSEEEECCBC
T ss_pred             hcCCCCEEEECCcc
Confidence              579999999875

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=95.94  E-value=0.024  Score=49.47  Aligned_cols=91  Identities=14%  Similarity=0.229  Sum_probs=57.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-------cHHHH---HHcCCceE-EeCCChhHHHHhcCCccEEEE
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-------SIDRV---LAAGAEQA-VDYSSKDIELAIKGKFDAVLD  243 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-------~~~~~---~~~g~~~v-~~~~~~~~~~~~~~~~dvvid  243 (307)
                      ..+|||+||+|.+|..+++.+...|.+|++++++.       +...+   ...+...+ .|..+.+.......++|+||.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~   83 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS   83 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            35799999999999999999988899999887764       11112   23344322 244443322223356999999


Q ss_pred             CCCCh--hhHHHHHhcccCC---cEEE
Q 021831          244 TIGAP--ETERLGLNFLKRG---GHYM  265 (307)
Q Consensus       244 ~~g~~--~~~~~~~~~l~~~---G~~v  265 (307)
                      +++..  .....+++.++..   +++|
T Consensus        84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           84 ALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             CCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             CCCccchhhHHHHHHHHHHhCCccEEe
Confidence            98853  1233444444332   4776

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=95.90  E-value=0.021  Score=50.12  Aligned_cols=98  Identities=16%  Similarity=0.095  Sum_probs=60.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HHHHH-----cCC-ceEE---eCCChhHHHHhcCCccEEE
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLA-----AGA-EQAV---DYSSKDIELAIKGKFDAVL  242 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~~~-----~g~-~~v~---~~~~~~~~~~~~~~~dvvi  242 (307)
                      -++.+|||+||+|.+|..+++.+...|.+|+++.++... ..+.+     .+. -..+   |..+.+..+.+..++|+||
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   88 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA   88 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence            457899999999999999999988889999998776432 22211     121 1222   3333222222224799999


Q ss_pred             ECCCChh--------------hHHHHHhccc--C-CcEEEEeccC
Q 021831          243 DTIGAPE--------------TERLGLNFLK--R-GGHYMTLHGE  270 (307)
Q Consensus       243 d~~g~~~--------------~~~~~~~~l~--~-~G~~v~~g~~  270 (307)
                      .+.+...              ....+++.+.  . .+++|.++..
T Consensus        89 h~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~  133 (342)
T 1y1p_A           89 HIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSST  133 (342)
T ss_dssp             ECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCG
T ss_pred             EeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccH
Confidence            9987421              1223444433  2 3789988864

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=95.89  E-value=0.027  Score=49.10  Aligned_cols=89  Identities=19%  Similarity=0.248  Sum_probs=57.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--HHHH---HHcCCceE-EeCCChh-HHHHhcCCccEEEECCCCh
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDRV---LAAGAEQA-VDYSSKD-IELAIKGKFDAVLDTIGAP  248 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--~~~~---~~~g~~~v-~~~~~~~-~~~~~~~~~dvvid~~g~~  248 (307)
                      .+|||+||+|.+|..+++.+...|.+|++++++..  ...+   ...+...+ .|..+.+ +.+.+ .++|+||.+++..
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~-~~~d~vi~~a~~~   90 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELM-KKVDVVISALAFP   90 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHH-TTCSEEEECCCGG
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHH-cCCCEEEECCchh
Confidence            47999999999999999999889999998877642  2222   33454322 2444433 33333 5799999998853


Q ss_pred             --hhHHHHHhcccC---CcEEE
Q 021831          249 --ETERLGLNFLKR---GGHYM  265 (307)
Q Consensus       249 --~~~~~~~~~l~~---~G~~v  265 (307)
                        .....+++.++.   -+++|
T Consensus        91 ~~~~~~~l~~aa~~~g~v~~~v  112 (318)
T 2r6j_A           91 QILDQFKILEAIKVAGNIKRFL  112 (318)
T ss_dssp             GSTTHHHHHHHHHHHCCCCEEE
T ss_pred             hhHHHHHHHHHHHhcCCCCEEE
Confidence              123444444433   24676

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.88  E-value=0.057  Score=44.94  Aligned_cols=92  Identities=11%  Similarity=0.120  Sum_probs=58.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhH
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE  251 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~  251 (307)
                      .|.+|||.|+ |.+|...++.+...|++|+++......  ..+.+.+.-..+...   +.+..-.++|+||-++++. ..
T Consensus        30 ~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~---~~~~dL~~adLVIaAT~d~-~~  104 (223)
T 3dfz_A           30 KGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKK---VGEEDLLNVFFIVVATNDQ-AV  104 (223)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSC---CCGGGSSSCSEEEECCCCT-HH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECC---CCHhHhCCCCEEEECCCCH-HH
Confidence            4889999995 999999999999999999888665432  223333322222211   1111124699999999998 44


Q ss_pred             HHHHhcccCCcEEEEeccC
Q 021831          252 RLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       252 ~~~~~~l~~~G~~v~~g~~  270 (307)
                      +..+...+..|..|-+...
T Consensus       105 N~~I~~~ak~gi~VNvvD~  123 (223)
T 3dfz_A          105 NKFVKQHIKNDQLVNMASS  123 (223)
T ss_dssp             HHHHHHHSCTTCEEEC---
T ss_pred             HHHHHHHHhCCCEEEEeCC
Confidence            5444444447777665544

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=95.88  E-value=0.014  Score=50.26  Aligned_cols=64  Identities=14%  Similarity=0.187  Sum_probs=45.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCCh-hHHHHhcC-CccEEEECCCC
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK-DIELAIKG-KFDAVLDTIGA  247 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~-~~dvvid~~g~  247 (307)
                      .-++..+|||+||+|.+|..+++.+...|.+|+++.+..             .|..+. .+.+.+.+ ++|+||++.+.
T Consensus         8 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-------------~Dl~d~~~~~~~~~~~~~d~vih~A~~   73 (292)
T 1vl0_A            8 HHHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-------------LDITNVLAVNKFFNEKKPNVVINCAAH   73 (292)
T ss_dssp             ----CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-------------CCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             cccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc-------------CCCCCHHHHHHHHHhcCCCEEEECCcc
Confidence            345678999999999999999999988899999987652             133332 23333333 68999998874

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.88  E-value=0.035  Score=49.27  Aligned_cols=75  Identities=12%  Similarity=0.131  Sum_probs=50.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHc-CC-EEEEEeCCccH-HH-HHHcC--CceEE--eCCChhHHHHhcCCccEEEEC
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVAS-GC-HVSATCGSKSI-DR-VLAAG--AEQAV--DYSSKDIELAIKGKFDAVLDT  244 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~-G~-~Vi~~~~~~~~-~~-~~~~g--~~~v~--~~~~~~~~~~~~~~~dvvid~  244 (307)
                      -.+.+|||+||+|.+|..+++.+... |. +|+++.+.... .. ...+.  ....+  |..+.+.......++|+||.+
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~   98 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHA   98 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEEC
Confidence            35789999999999999999888887 98 99998876442 22 22222  11222  444433333333579999999


Q ss_pred             CCC
Q 021831          245 IGA  247 (307)
Q Consensus       245 ~g~  247 (307)
                      ++.
T Consensus        99 Aa~  101 (344)
T 2gn4_A           99 AAL  101 (344)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            875

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=95.86  E-value=0.022  Score=48.75  Aligned_cols=98  Identities=20%  Similarity=0.236  Sum_probs=65.7

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCcc-HHHHH----Hc-C--Cc--eEEeCCChhHHHHh-
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKS-IDRVL----AA-G--AE--QAVDYSSKDIELAI-  234 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~~-~~~~~----~~-g--~~--~v~~~~~~~~~~~~-  234 (307)
                      ....++++++||-.|+ | .|..+..+++..  +.+|+++..+.. .+.++    .. |  ..  .+...+..+.  .. 
T Consensus        93 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~--~~~  168 (280)
T 1i9g_A           93 HEGDIFPGARVLEAGA-G-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS--ELP  168 (280)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC--CCC
T ss_pred             HHcCCCCCCEEEEEcc-c-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc--CCC
Confidence            3667899999999994 4 788888999875  459999865443 33332    22 4  22  2222221111  11 


Q ss_pred             cCCccEEEECCCCh-hhHHHHHhcccCCcEEEEecc
Q 021831          235 KGKFDAVLDTIGAP-ETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       235 ~~~~dvvid~~g~~-~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      .+.||+|+...... ..+..+.+.|+++|+++....
T Consensus       169 ~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  204 (280)
T 1i9g_A          169 DGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA  204 (280)
T ss_dssp             TTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             CCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence            14799999877665 578899999999999998764

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=95.86  E-value=0.004  Score=53.23  Aligned_cols=94  Identities=14%  Similarity=0.042  Sum_probs=58.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCc-eEEeCCChhHHHHhcCCccEEEECCCCh--hh-
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE-QAVDYSSKDIELAIKGKFDAVLDTIGAP--ET-  250 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~~~dvvid~~g~~--~~-  250 (307)
                      +.+|||+||+|.+|..+++.+...|++|+++.++.....  ..+.. ...|..+.+..+.+..++|+||++.|..  .. 
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~~~~~   80 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA--GPNEECVQCDLADANAVNAMVAGCDGIVHLGGISVEKPF   80 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCSCCCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcCcCCH
Confidence            468999999999999999998888999998877643211  11111 1123444333333335799999998741  01 


Q ss_pred             ----------HHHHHhccc--CCcEEEEeccC
Q 021831          251 ----------ERLGLNFLK--RGGHYMTLHGE  270 (307)
Q Consensus       251 ----------~~~~~~~l~--~~G~~v~~g~~  270 (307)
                                ...+++.++  ..+++|.++..
T Consensus        81 ~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~  112 (267)
T 3rft_A           81 EQILQGNIIGLYNLYEAARAHGQPRIVFASSN  112 (267)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEG
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCEEEEEcch
Confidence                      112333332  34799988864

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=95.84  E-value=0.025  Score=52.56  Aligned_cols=90  Identities=16%  Similarity=0.096  Sum_probs=66.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHH-HHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhH
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSID-RVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE  251 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~  251 (307)
                      -.|.+|.|+| .|.+|..+++.++.+|++|++..+..... .+...|.. +     .++.+.+ ...|+|+-+++....+
T Consensus       255 l~GktVgIIG-~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~-~-----~~l~ell-~~aDiVi~~~~t~~lI  326 (479)
T 1v8b_A          255 ISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFN-V-----VTLDEIV-DKGDFFITCTGNVDVI  326 (479)
T ss_dssp             CTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCE-E-----CCHHHHT-TTCSEEEECCSSSSSB
T ss_pred             cCCCEEEEEe-eCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCE-e-----cCHHHHH-hcCCEEEECCChhhhc
Confidence            4789999999 69999999999999999999987654432 34445552 2     1344433 4689999998765433


Q ss_pred             -HHHHhcccCCcEEEEeccC
Q 021831          252 -RLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       252 -~~~~~~l~~~G~~v~~g~~  270 (307)
                       ...+..|+++..++.+|-.
T Consensus       327 ~~~~l~~MK~gailiNvgrg  346 (479)
T 1v8b_A          327 KLEHLLKMKNNAVVGNIGHF  346 (479)
T ss_dssp             CHHHHTTCCTTCEEEECSST
T ss_pred             CHHHHhhcCCCcEEEEeCCC
Confidence             3567889999999998854

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=95.81  E-value=0.023  Score=48.02  Aligned_cols=99  Identities=13%  Similarity=0.194  Sum_probs=62.6

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCcc-HHH----HHHcCCc---eEEeCCChhHHHHhc--C
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKS-IDR----VLAAGAE---QAVDYSSKDIELAIK--G  236 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~~-~~~----~~~~g~~---~v~~~~~~~~~~~~~--~  236 (307)
                      .....++.+||-+|.  +.|..+..+++..  +.+|+++..+.. .+.    ++..|..   .++..+..+......  +
T Consensus        58 l~~~~~~~~VLdiG~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~  135 (248)
T 3tfw_A           58 LVRLTQAKRILEIGT--LGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECP  135 (248)
T ss_dssp             HHHHHTCSEEEEECC--TTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCC
T ss_pred             HHhhcCCCEEEEecC--CchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCC
Confidence            334567899999994  4588888998876  469999865443 333    3344543   233332222222222  3


Q ss_pred             CccEEEECCCC---hhhHHHHHhcccCCcEEEEecc
Q 021831          237 KFDAVLDTIGA---PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       237 ~~dvvid~~g~---~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      .||+|+-....   ...+..+.+.|+|||.++.-..
T Consensus       136 ~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~  171 (248)
T 3tfw_A          136 AFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNV  171 (248)
T ss_dssp             CCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred             CeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence            79999854332   2357788899999999887544

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=95.80  E-value=0.03  Score=52.23  Aligned_cols=90  Identities=18%  Similarity=0.115  Sum_probs=66.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHH-HHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhH
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSID-RVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE  251 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~  251 (307)
                      -.|.+|.|+| .|.+|..+++.++.+|++|++..+..... .....|.. +     .++.+.+ ...|+|+.+++....+
T Consensus       275 L~GktVgIIG-~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~-~-----~~l~ell-~~aDiVi~~~~t~~lI  346 (494)
T 3d64_A          275 IAGKIAVVAG-YGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYR-V-----VTMEYAA-DKADIFVTATGNYHVI  346 (494)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCE-E-----CCHHHHT-TTCSEEEECSSSSCSB
T ss_pred             cCCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCE-e-----CCHHHHH-hcCCEEEECCCccccc
Confidence            4689999999 59999999999999999999986654432 23344543 2     1344433 5689999998765333


Q ss_pred             -HHHHhcccCCcEEEEeccC
Q 021831          252 -RLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       252 -~~~~~~l~~~G~~v~~g~~  270 (307)
                       ...+..|+++..++.+|..
T Consensus       347 ~~~~l~~MK~gAilINvgrg  366 (494)
T 3d64_A          347 NHDHMKAMRHNAIVCNIGHF  366 (494)
T ss_dssp             CHHHHHHCCTTEEEEECSSS
T ss_pred             CHHHHhhCCCCcEEEEcCCC
Confidence             4567889999999988854

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=95.78  E-value=0.015  Score=51.17  Aligned_cols=100  Identities=24%  Similarity=0.244  Sum_probs=63.9

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCcc-HHH----HHHcCCce--EEeCCChhHHHHhcCCc
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKS-IDR----VLAAGAEQ--AVDYSSKDIELAIKGKF  238 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G--~~Vi~~~~~~~-~~~----~~~~g~~~--v~~~~~~~~~~~~~~~~  238 (307)
                      ....++++++||-+|. |. |..+..+++..+  .+|+++..+.+ .+.    ++..|...  +...+..+... ..+.|
T Consensus        69 ~~l~~~~~~~VLDiGc-G~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~-~~~~f  145 (317)
T 1dl5_A           69 EWVGLDKGMRVLEIGG-GT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP-EFSPY  145 (317)
T ss_dssp             HHTTCCTTCEEEEECC-TT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-GGCCE
T ss_pred             HhcCCCCcCEEEEecC-Cc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccc-cCCCe
Confidence            4667889999999994 43 888888887654  46998865543 233    33445432  22222111110 12579


Q ss_pred             cEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       239 dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      |+|+....-......+.+.|+|||+++..-.+
T Consensus       146 D~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~~~  177 (317)
T 1dl5_A          146 DVIFVTVGVDEVPETWFTQLKEGGRVIVPINL  177 (317)
T ss_dssp             EEEEECSBBSCCCHHHHHHEEEEEEEEEEBCB
T ss_pred             EEEEEcCCHHHHHHHHHHhcCCCcEEEEEECC
Confidence            99998766543446788899999998876443

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=95.76  E-value=0.028  Score=48.99  Aligned_cols=73  Identities=18%  Similarity=0.179  Sum_probs=47.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceE-EeCCCh-hHHHHhcC-CccEEEECCCC
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQA-VDYSSK-DIELAIKG-KFDAVLDTIGA  247 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v-~~~~~~-~~~~~~~~-~~dvvid~~g~  247 (307)
                      .++..+|||+||+|.+|..+++.+...|.+|+++.+......   ++...+ .|..+. .+.+.+.+ ++|+||.+.+.
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~   84 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKL---PNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAK   84 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCCC---TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSC
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccc---ceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcc
Confidence            356789999999999999999999889999999876543211   222211 233333 23333333 59999999874

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=95.75  E-value=0.046  Score=43.39  Aligned_cols=99  Identities=19%  Similarity=0.165  Sum_probs=62.9

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHH----HHcCCceEEeCCChhHHHHhc--CCccE
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRV----LAAGAEQAVDYSSKDIELAIK--GKFDA  240 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~----~~~g~~~v~~~~~~~~~~~~~--~~~dv  240 (307)
                      ....+.++++||-.|+ |. |..+..+++.. .+|+++..+.. .+.+    ...+...-+.....++.+.+.  +.||+
T Consensus        27 ~~~~~~~~~~vldiG~-G~-G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~  103 (192)
T 1l3i_A           27 CLAEPGKNDVAVDVGC-GT-GGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDI  103 (192)
T ss_dssp             HHHCCCTTCEEEEESC-TT-SHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEE
T ss_pred             HhcCCCCCCEEEEECC-CC-CHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCCCE
Confidence            3557889999999994 43 88888887765 78888865443 3333    334431111111123333333  47999


Q ss_pred             EEECCCC---hhhHHHHHhcccCCcEEEEecc
Q 021831          241 VLDTIGA---PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       241 vid~~g~---~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      |+.....   ...+..+.+.|+++|.++....
T Consensus       104 v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~  135 (192)
T 1l3i_A          104 AVVGGSGGELQEILRIIKDKLKPGGRIIVTAI  135 (192)
T ss_dssp             EEESCCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             EEECCchHHHHHHHHHHHHhcCCCcEEEEEec
Confidence            9976542   3467788889999999988654

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=95.75  E-value=0.048  Score=47.92  Aligned_cols=96  Identities=14%  Similarity=0.129  Sum_probs=60.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC---ccH--HHHHH----cCC-ceEEeCCC-hhHHHHhcCCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS---KSI--DRVLA----AGA-EQAVDYSS-KDIELAIKGKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~---~~~--~~~~~----~g~-~~v~~~~~-~~~~~~~~~~~dvv  241 (307)
                      .|.++||+|+ |++|.+++..+...|+ +|+...|+   .+.  +.+++    .+. ..+.++.+ +++.+.+ ..+|+|
T Consensus       153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l-~~aDiI  230 (315)
T 3tnl_A          153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEI-AESVIF  230 (315)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHH-HTCSEE
T ss_pred             cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhh-cCCCEE
Confidence            5889999996 8999999999999999 78877776   221  11222    222 23445544 2333333 359999


Q ss_pred             EECCCChhh-----HHH-HHhcccCCcEEEEeccCc
Q 021831          242 LDTIGAPET-----ERL-GLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       242 id~~g~~~~-----~~~-~~~~l~~~G~~v~~g~~~  271 (307)
                      |+|++....     ... -...++++..++++-.-+
T Consensus       231 INaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY~P  266 (315)
T 3tnl_A          231 TNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKP  266 (315)
T ss_dssp             EECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCCSS
T ss_pred             EECccCCCCCCCCCCCCCcHHHcCCCCEEEEeccCC
Confidence            999863200     011 234577777777776543

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=95.70  E-value=0.017  Score=50.27  Aligned_cols=67  Identities=15%  Similarity=0.161  Sum_probs=39.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCCh-hHHHHhcC-CccEEEECCCC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK-DIELAIKG-KFDAVLDTIGA  247 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~-~~dvvid~~g~  247 (307)
                      +.+|||+||+|.+|..+++.+...|.+|+++.++....     + ....|..+. .+.+.+.+ ++|+||.+.+.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~-~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~   70 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARP-----K-FEQVNLLDSNAVHHIIHDFQPHVIVHCAAE   70 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------------CHHHHHHHCCSEEEECC--
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCC-----C-eEEecCCCHHHHHHHHHhhCCCEEEECCcc
Confidence            56899999999999999999988999999987653321     1 111222222 22333333 58999999874

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=95.69  E-value=0.099  Score=43.27  Aligned_cols=97  Identities=10%  Similarity=0.128  Sum_probs=61.5

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCcc-HHH----HHHcCCc-eEEeCCChhHHH---Hh-cCC
Q 021831          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKS-IDR----VLAAGAE-QAVDYSSKDIEL---AI-KGK  237 (307)
Q Consensus       170 ~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~~-~~~----~~~~g~~-~v~~~~~~~~~~---~~-~~~  237 (307)
                      .+.+++.+||=+|  .+.|..+..+++..  +.+|+++..+.+ .+.    ++..|.. .-+.....+..+   .. .+.
T Consensus        52 ~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~  129 (221)
T 3dr5_A           52 TNGNGSTGAIAIT--PAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDS  129 (221)
T ss_dssp             SCCTTCCEEEEES--TTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTC
T ss_pred             hCCCCCCCEEEEc--CCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCC
Confidence            3444556999998  56799999999876  579999865543 232    3445543 122222222222   23 257


Q ss_pred             ccEEEECCCCh---hhHHHHHhcccCCcEEEEec
Q 021831          238 FDAVLDTIGAP---ETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       238 ~dvvid~~g~~---~~~~~~~~~l~~~G~~v~~g  268 (307)
                      ||+||-.....   ..+..+.+.|+|||.++.-.
T Consensus       130 fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn  163 (221)
T 3dr5_A          130 YQLVFGQVSPMDLKALVDAAWPLLRRGGALVLAD  163 (221)
T ss_dssp             EEEEEECCCTTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred             cCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeC
Confidence            99998654322   35778889999999999743

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=95.69  E-value=0.032  Score=46.89  Aligned_cols=97  Identities=21%  Similarity=0.178  Sum_probs=63.9

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc---eEEeCCChhHHHHhcCCcc
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE---QAVDYSSKDIELAIKGKFD  239 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~---~v~~~~~~~~~~~~~~~~d  239 (307)
                      ....++++++||-+|.  +.|..+..+++..|++|+++..+.. .+.    +...|..   .+...+..++..  .+.||
T Consensus        30 ~~~~~~~~~~VLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~fD  105 (256)
T 1nkv_A           30 RVLRMKPGTRILDLGS--GSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA--NEKCD  105 (256)
T ss_dssp             HHTCCCTTCEEEEETC--TTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC--SSCEE
T ss_pred             HhcCCCCCCEEEEECC--CCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc--CCCCC
Confidence            4567889999999994  3488888999888999999865543 232    3334432   222222222111  25799


Q ss_pred             EEEECC-----C-ChhhHHHHHhcccCCcEEEEec
Q 021831          240 AVLDTI-----G-APETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       240 vvid~~-----g-~~~~~~~~~~~l~~~G~~v~~g  268 (307)
                      +|+...     . -...+..+.+.|+|||+++...
T Consensus       106 ~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A          106 VAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             EEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             EEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence            998632     1 2346788899999999998754

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=95.67  E-value=0.064  Score=47.25  Aligned_cols=90  Identities=10%  Similarity=0.011  Sum_probs=65.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChh---
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE---  249 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~---  249 (307)
                      .|.+|.|+| .|.+|...++.++..|++|++..+ ..+...+.+.|...   .  .++.+.+ ...|+|+.+++...   
T Consensus       145 ~g~~vgIIG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~---~--~~l~ell-~~aDvVil~~p~~~~t~  217 (320)
T 1gdh_A          145 DNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATF---H--DSLDSLL-SVSQFFSLNAPSTPETR  217 (320)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEE---C--SSHHHHH-HHCSEEEECCCCCTTTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCcChhhhhhcCcEE---c--CCHHHHH-hhCCEEEEeccCchHHH
Confidence            578999999 599999999999999999999877 65555556667632   1  1232322 34899999988542   


Q ss_pred             -hH-HHHHhcccCCcEEEEeccC
Q 021831          250 -TE-RLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       250 -~~-~~~~~~l~~~G~~v~~g~~  270 (307)
                       .+ ...+..|++++.+|.++..
T Consensus       218 ~~i~~~~l~~mk~gailIn~arg  240 (320)
T 1gdh_A          218 YFFNKATIKSLPQGAIVVNTARG  240 (320)
T ss_dssp             TCBSHHHHTTSCTTEEEEECSCG
T ss_pred             hhcCHHHHhhCCCCcEEEECCCC
Confidence             12 3466788999999988863

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=95.65  E-value=0.053  Score=47.74  Aligned_cols=72  Identities=19%  Similarity=0.272  Sum_probs=46.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCc---cHHHHHHcC--CceEE--eCCChhHHHHhcCCccEEEECCC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSK---SIDRVLAAG--AEQAV--DYSSKDIELAIKGKFDAVLDTIG  246 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~---~~~~~~~~g--~~~v~--~~~~~~~~~~~~~~~dvvid~~g  246 (307)
                      .+|||+||+|.+|...++.+...  |.+|+++.+..   ....+.++.  ...++  |..+.+....+..++|+||.+.+
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~   84 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAA   84 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECCc
Confidence            47999999999999998888777  78999987643   122222221  11222  33333323333356899999988


Q ss_pred             C
Q 021831          247 A  247 (307)
Q Consensus       247 ~  247 (307)
                      .
T Consensus        85 ~   85 (348)
T 1oc2_A           85 E   85 (348)
T ss_dssp             C
T ss_pred             c
Confidence            5

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=95.64  E-value=0.042  Score=45.37  Aligned_cols=99  Identities=20%  Similarity=0.191  Sum_probs=63.2

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCcc-HHHH----HHcCCc---eEEeCCChhHHHHhc---
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKS-IDRV----LAAGAE---QAVDYSSKDIELAIK---  235 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~~-~~~~----~~~g~~---~v~~~~~~~~~~~~~---  235 (307)
                      .....++++||-+|.  +.|..+..+++..  +.+|+++..+.. .+.+    +..|..   .++..+..+....+.   
T Consensus        64 l~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~  141 (229)
T 2avd_A           64 LARLIQAKKALDLGT--FTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAG  141 (229)
T ss_dssp             HHHHTTCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTT
T ss_pred             HHHhcCCCEEEEEcC--CccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcC
Confidence            344567889999993  3888889999875  468999865443 3333    334432   233333223322221   


Q ss_pred             --CCccEEEECCCCh---hhHHHHHhcccCCcEEEEecc
Q 021831          236 --GKFDAVLDTIGAP---ETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       236 --~~~dvvid~~g~~---~~~~~~~~~l~~~G~~v~~g~  269 (307)
                        +.||+|+-.....   ..+..+.+.|++||.++....
T Consensus       142 ~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~  180 (229)
T 2avd_A          142 EAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRV  180 (229)
T ss_dssp             CTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             CCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECC
Confidence              5799987654432   367888899999999988553

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=95.64  E-value=0.043  Score=50.11  Aligned_cols=38  Identities=11%  Similarity=0.068  Sum_probs=32.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~  210 (307)
                      .++.+|||+||+|.+|..++..+...|++|+++.++..
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~  104 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADN  104 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSS
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCC
Confidence            34669999999999999998888888899999977654

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=95.64  E-value=0.02  Score=45.68  Aligned_cols=99  Identities=14%  Similarity=0.122  Sum_probs=62.3

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc--eEEeCCChhHHHHhcCCccEE
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE--QAVDYSSKDIELAIKGKFDAV  241 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~--~v~~~~~~~~~~~~~~~~dvv  241 (307)
                      ...+++|++||=.|.  +.|..+..+++. +.+|+++..+.. .+.    ++..+..  .++.....++.....+.||+|
T Consensus        17 ~~~~~~~~~vLDiGc--G~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v   93 (185)
T 3mti_A           17 AEVLDDESIVVDATM--GNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAA   93 (185)
T ss_dssp             HTTCCTTCEEEESCC--TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEE
T ss_pred             HHhCCCCCEEEEEcC--CCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEE
Confidence            346788999999983  458888888877 889999966543 233    3334432  333322222222223579999


Q ss_pred             EECCCC-----------h----hhHHHHHhcccCCcEEEEeccC
Q 021831          242 LDTIGA-----------P----ETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       242 id~~g~-----------~----~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      +.+.+-           .    ..+..+.+.|+|||+++.+...
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  137 (185)
T 3mti_A           94 IFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY  137 (185)
T ss_dssp             EEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred             EEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence            866321           1    2357788899999999887653

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=95.59  E-value=0.077  Score=46.90  Aligned_cols=73  Identities=14%  Similarity=0.028  Sum_probs=48.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--HHHHH----Hc-----CCceEE--eCCChhHHHHhcCCccEE
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDRVL----AA-----GAEQAV--DYSSKDIELAIKGKFDAV  241 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--~~~~~----~~-----g~~~v~--~~~~~~~~~~~~~~~dvv  241 (307)
                      +.+|||+||+|.+|..+++.+...|.+|+++.+...  .+.+.    .+     ....++  |..+.+....+..++|+|
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v  106 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDYV  106 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCEE
Confidence            578999999999999999999888999999876432  12221    11     111233  333333222222579999


Q ss_pred             EECCCC
Q 021831          242 LDTIGA  247 (307)
Q Consensus       242 id~~g~  247 (307)
                      |.+++.
T Consensus       107 ih~A~~  112 (352)
T 1sb8_A          107 LHQAAL  112 (352)
T ss_dssp             EECCSC
T ss_pred             EECCcc
Confidence            999884

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=95.59  E-value=0.033  Score=50.01  Aligned_cols=71  Identities=14%  Similarity=0.045  Sum_probs=48.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHH-HHHcCCceEE--eCCChh-HHHHhcCCccEEEECCCC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR-VLAAGAEQAV--DYSSKD-IELAIKGKFDAVLDTIGA  247 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~-~~~~g~~~v~--~~~~~~-~~~~~~~~~dvvid~~g~  247 (307)
                      +.+|||+||+|.+|..+++.+...|.+|+++.+...... ....+. .++  |..+.+ +.+.+ .++|+||.+.+.
T Consensus        29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v-~~~~~Dl~d~~~~~~~~-~~~d~Vih~A~~  103 (379)
T 2c5a_A           29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCD-EFHLVDLRVMENCLKVT-EGVDHVFNLAAD  103 (379)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCS-EEEECCTTSHHHHHHHH-TTCSEEEECCCC
T ss_pred             CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCc-eEEECCCCCHHHHHHHh-CCCCEEEECcee
Confidence            568999999999999999998888999999877543211 111122 233  333333 33333 579999999874

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=95.59  E-value=0.019  Score=49.84  Aligned_cols=72  Identities=18%  Similarity=0.138  Sum_probs=47.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCccHHHHHHcCCce-EEeCCCh-hHHHHhc-CCccEEEECCCC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSIDRVLAAGAEQ-AVDYSSK-DIELAIK-GKFDAVLDTIGA  247 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~g~~~-v~~~~~~-~~~~~~~-~~~dvvid~~g~  247 (307)
                      +.+|||+||+|.+|...++.+...  |.+|+++.+......+.. +... ..|..+. ++.+.+. .++|+||.+.+.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~-~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~   78 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVN-SGPFEVVNALDFNQIEHLVEVHKITDIYLMAAL   78 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHH-SSCEEECCTTCHHHHHHHHHHTTCCEEEECCCC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccC-CCceEEecCCCHHHHHHHHhhcCCCEEEECCcc
Confidence            367999999999999998888777  789998876543222221 2221 2233333 3333343 279999999885

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=95.56  E-value=0.052  Score=47.95  Aligned_cols=100  Identities=23%  Similarity=0.148  Sum_probs=62.5

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCcc-HHHHH----HcC-------------CceEEeCCCh
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKS-IDRVL----AAG-------------AEQAVDYSSK  228 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G--~~Vi~~~~~~~-~~~~~----~~g-------------~~~v~~~~~~  228 (307)
                      ...+++|++||-.|. | .|..+..+++..|  .+|+++..+.. .+.++    .++             .-.+...+..
T Consensus       100 ~l~~~~g~~VLDiG~-G-~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~  177 (336)
T 2b25_A          100 MMDINPGDTVLEAGS-G-SGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDIS  177 (336)
T ss_dssp             HHTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTT
T ss_pred             hcCCCCCCEEEEeCC-C-cCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChH
Confidence            557899999999994 4 3888888888766  58999865443 33322    211             1123333222


Q ss_pred             hHHHHhc-CCccEEEECCCCh-hhHHHHHhcccCCcEEEEeccC
Q 021831          229 DIELAIK-GKFDAVLDTIGAP-ETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       229 ~~~~~~~-~~~dvvid~~g~~-~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      +....+. +.||+|+-....+ ..+..+.+.|+|||+++.....
T Consensus       178 ~~~~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~  221 (336)
T 2b25_A          178 GATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVVN  221 (336)
T ss_dssp             CCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEESS
T ss_pred             HcccccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeCC
Confidence            2111112 4699998766554 3578899999999999976653

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=95.55  E-value=0.055  Score=48.31  Aligned_cols=89  Identities=19%  Similarity=0.228  Sum_probs=64.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChh---
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE---  249 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~---  249 (307)
                      .|.+|.|+| .|.+|..+++.++.+|++|++..+.. ..+.+.+.|...+     .++.+.+ ...|+|+.+++...   
T Consensus       163 ~gktvGIIG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~ell-~~aDvV~l~~Plt~~t~  235 (351)
T 3jtm_A          163 EGKTIGTVG-AGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFV-----EDLNEML-PKCDVIVINMPLTEKTR  235 (351)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEEC-----SCHHHHG-GGCSEEEECSCCCTTTT
T ss_pred             cCCEEeEEE-eCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEc-----CCHHHHH-hcCCEEEECCCCCHHHH
Confidence            588999999 69999999999999999999887653 4555666776432     2333333 44899999887421   


Q ss_pred             --hHHHHHhcccCCcEEEEecc
Q 021831          250 --TERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       250 --~~~~~~~~l~~~G~~v~~g~  269 (307)
                        .-...+..|+++..+|.++-
T Consensus       236 ~li~~~~l~~mk~gailIN~aR  257 (351)
T 3jtm_A          236 GMFNKELIGKLKKGVLIVNNAR  257 (351)
T ss_dssp             TCBSHHHHHHSCTTEEEEECSC
T ss_pred             HhhcHHHHhcCCCCCEEEECcC
Confidence              12456778888888888874

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=95.55  E-value=0.035  Score=49.08  Aligned_cols=92  Identities=18%  Similarity=0.202  Sum_probs=58.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc--c---HHH---HHHcCCceE-EeCCCh-hHHHHhc-CCccEEEE
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK--S---IDR---VLAAGAEQA-VDYSSK-DIELAIK-GKFDAVLD  243 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~--~---~~~---~~~~g~~~v-~~~~~~-~~~~~~~-~~~dvvid  243 (307)
                      ..+|||+||+|.+|..+++.+...|.+|++++++.  .   ...   +...+...+ .|..+. ++.+.+. .++|+||.
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~   89 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS   89 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence            35899999999999999999988999999998765  1   111   223344322 234333 3344443 27999999


Q ss_pred             CCCCh--hhHHHHHhcccCCc---EEEE
Q 021831          244 TIGAP--ETERLGLNFLKRGG---HYMT  266 (307)
Q Consensus       244 ~~g~~--~~~~~~~~~l~~~G---~~v~  266 (307)
                      +.+..  .....+++.++..|   +++.
T Consensus        90 ~a~~~n~~~~~~l~~aa~~~g~v~~~v~  117 (346)
T 3i6i_A           90 TVGGESILDQIALVKAMKAVGTIKRFLP  117 (346)
T ss_dssp             CCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred             CCchhhHHHHHHHHHHHHHcCCceEEee
Confidence            99853  23344555554444   6663

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=95.51  E-value=0.0091  Score=50.15  Aligned_cols=95  Identities=20%  Similarity=0.194  Sum_probs=59.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcC----Cc-eEEeCCChhHHHHhc-CCccEE-EE
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAG----AE-QAVDYSSKDIELAIK-GKFDAV-LD  243 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g----~~-~v~~~~~~~~~~~~~-~~~dvv-id  243 (307)
                      ..+|.+||-+|  .+.|..+..+++..+.+++++.-+. -.+.+++..    .. .++..+..+...... +.||.| +|
T Consensus        58 ~~~G~rVLdiG--~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D  135 (236)
T 3orh_A           58 SSKGGRVLEVG--FGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYD  135 (236)
T ss_dssp             TTTCEEEEEEC--CTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEEC
T ss_pred             ccCCCeEEEEC--CCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEe
Confidence            36899999999  3468888888887777888874443 344454432    22 233332222222222 479977 56


Q ss_pred             CCCC----------hhhHHHHHhcccCCcEEEEec
Q 021831          244 TIGA----------PETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       244 ~~g~----------~~~~~~~~~~l~~~G~~v~~g  268 (307)
                      +...          ...+..+.+.|+|||+++.+.
T Consensus       136 ~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~  170 (236)
T 3orh_A          136 TYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             CCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             eeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence            5432          124567889999999998875

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=95.50  E-value=0.028  Score=48.60  Aligned_cols=90  Identities=18%  Similarity=0.264  Sum_probs=55.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc----H---HHH---HHcCCceE-EeCCCh-hHHHHhcCCccEEE
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS----I---DRV---LAAGAEQA-VDYSSK-DIELAIKGKFDAVL  242 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~----~---~~~---~~~g~~~v-~~~~~~-~~~~~~~~~~dvvi  242 (307)
                      ..+|+|+||+|.+|..+++.+...|.+|++++++..    .   ..+   ...+...+ .|..+. ++.+.+ .++|+||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~-~~~d~vi   82 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAV-KNVDVVI   82 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHH-HTCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHH-cCCCEEE
Confidence            467999999999999999999889999998877532    1   112   22343322 234443 233333 4699999


Q ss_pred             ECCCChh--hHHHHHhcccC---CcEEE
Q 021831          243 DTIGAPE--TERLGLNFLKR---GGHYM  265 (307)
Q Consensus       243 d~~g~~~--~~~~~~~~l~~---~G~~v  265 (307)
                      .+++...  ....+++.++.   -.++|
T Consensus        83 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (308)
T 1qyc_A           83 STVGSLQIESQVNIIKAIKEVGTVKRFF  110 (308)
T ss_dssp             ECCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred             ECCcchhhhhHHHHHHHHHhcCCCceEe
Confidence            9998531  22333443332   25776

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=95.50  E-value=0.16  Score=42.79  Aligned_cols=97  Identities=12%  Similarity=0.168  Sum_probs=62.6

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCcc-HHH----HHHcCCc---eEEeCCChhHHHHh-----
Q 021831          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKS-IDR----VLAAGAE---QAVDYSSKDIELAI-----  234 (307)
Q Consensus       170 ~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~~-~~~----~~~~g~~---~v~~~~~~~~~~~~-----  234 (307)
                      ....++++||-+|  ++.|..+..+++.+  +.+|+++..+.+ .+.    .++.|..   .++..+..+....+     
T Consensus        75 ~~~~~~~~VLeiG--~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~  152 (247)
T 1sui_A           75 LKLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEK  152 (247)
T ss_dssp             HHHTTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGG
T ss_pred             HHhhCcCEEEEeC--CCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccC
Confidence            3445678999998  45788888898876  579999865543 333    3345542   23333333333333     


Q ss_pred             -cCCccEEEECCCC---hhhHHHHHhcccCCcEEEEec
Q 021831          235 -KGKFDAVLDTIGA---PETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       235 -~~~~dvvid~~g~---~~~~~~~~~~l~~~G~~v~~g  268 (307)
                       .+.||+||-....   ...+..+.+.|++||.++.-.
T Consensus       153 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~  190 (247)
T 1sui_A          153 NHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN  190 (247)
T ss_dssp             GTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred             CCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEec
Confidence             3579998854332   235678899999999998643

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=95.50  E-value=0.039  Score=46.51  Aligned_cols=99  Identities=11%  Similarity=0.087  Sum_probs=65.3

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCc----eEEeCCChhHHHHhcCCccEEE
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAE----QAVDYSSKDIELAIKGKFDAVL  242 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~----~v~~~~~~~~~~~~~~~~dvvi  242 (307)
                      ....++++.+||-+|.  +.|..+..+++..+++|+++..+.. .+.+++....    .++..+..+. ....+.||+|+
T Consensus        49 ~~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~-~~~~~~fD~v~  125 (266)
T 3ujc_A           49 SDIELNENSKVLDIGS--GLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTK-EFPENNFDLIY  125 (266)
T ss_dssp             TTCCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTC-CCCTTCEEEEE
T ss_pred             HhcCCCCCCEEEEECC--CCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccC-CCCCCcEEEEe
Confidence            3556789999999994  4788899999877899999966543 4555554321    2222222111 00125799999


Q ss_pred             ECCCC--------hhhHHHHHhcccCCcEEEEecc
Q 021831          243 DTIGA--------PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       243 d~~g~--------~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      ....-        ...+..+.+.|+|||+++....
T Consensus       126 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  160 (266)
T 3ujc_A          126 SRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY  160 (266)
T ss_dssp             EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             HHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence            86432        1246788889999999988753

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=95.49  E-value=0.086  Score=45.00  Aligned_cols=90  Identities=13%  Similarity=0.070  Sum_probs=59.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCCh----hh
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAP----ET  250 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~----~~  250 (307)
                      .+|||+|+ |.+|...++.+...|.+|+++.++... ..+...+.. .+..+-.++.   ..++|+||.+.+..    ..
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~D~~d~~---~~~~d~vi~~a~~~~~~~~~   80 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAE-PLLWPGEEPS---LDGVTHLLISTAPDSGGDPV   80 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEE-EEESSSSCCC---CTTCCEEEECCCCBTTBCHH
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCe-EEEecccccc---cCCCCEEEECCCccccccHH
Confidence            58999998 999999999998899999999876543 334444443 3333322222   35799999998742    12


Q ss_pred             HHHHHhcccC----CcEEEEeccC
Q 021831          251 ERLGLNFLKR----GGHYMTLHGE  270 (307)
Q Consensus       251 ~~~~~~~l~~----~G~~v~~g~~  270 (307)
                      ...++..++.    -.++|.++..
T Consensus        81 ~~~l~~a~~~~~~~~~~~v~~Ss~  104 (286)
T 3ius_A           81 LAALGDQIAARAAQFRWVGYLSTT  104 (286)
T ss_dssp             HHHHHHHHHHTGGGCSEEEEEEEG
T ss_pred             HHHHHHHHHhhcCCceEEEEeecc
Confidence            3344444432    3688888754

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=95.47  E-value=0.046  Score=48.77  Aligned_cols=90  Identities=21%  Similarity=0.149  Sum_probs=62.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChh----
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE----  249 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~----  249 (307)
                      .|.+|.|+| .|.+|...++.++..|++|++..+..........|...+   .  ++.+.+ ...|+|+.+++...    
T Consensus       167 ~g~tvGIIG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~---~--~l~ell-~~aDvV~l~~P~t~~t~~  239 (347)
T 1mx3_A          167 RGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRV---S--TLQDLL-FHSDCVTLHCGLNEHNHH  239 (347)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEEC---S--SHHHHH-HHCSEEEECCCCCTTCTT
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHHCCCEEEEECCCcchhhHhhcCCeec---C--CHHHHH-hcCCEEEEcCCCCHHHHH
Confidence            578999999 699999999999999999988865543334455665321   1  222222 23799998876531    


Q ss_pred             hH-HHHHhcccCCcEEEEeccC
Q 021831          250 TE-RLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       250 ~~-~~~~~~l~~~G~~v~~g~~  270 (307)
                      .+ ...+..|+++..+|.++..
T Consensus       240 li~~~~l~~mk~gailIN~arg  261 (347)
T 1mx3_A          240 LINDFTVKQMRQGAFLVNTARG  261 (347)
T ss_dssp             SBSHHHHTTSCTTEEEEECSCT
T ss_pred             HhHHHHHhcCCCCCEEEECCCC
Confidence            12 4566788888888888754

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=95.45  E-value=0.05  Score=47.63  Aligned_cols=77  Identities=19%  Similarity=0.164  Sum_probs=48.9

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH---HHHHHcC---CceEE--eCCCh-hHHHHhcC-CccE
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAG---AEQAV--DYSSK-DIELAIKG-KFDA  240 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~---~~~~~~g---~~~v~--~~~~~-~~~~~~~~-~~dv  240 (307)
                      .-+++.+|||+||+|.+|..+++.+...|.+|+++.+....   ..+..+.   ...++  |..+. ++.+.+.+ ++|+
T Consensus        10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   89 (335)
T 1rpn_A           10 HGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQE   89 (335)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             ccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCE
Confidence            44688999999999999999999998899999998765431   2333331   11222  33333 33333433 5899


Q ss_pred             EEECCCC
Q 021831          241 VLDTIGA  247 (307)
Q Consensus       241 vid~~g~  247 (307)
                      ||.+.+.
T Consensus        90 Vih~A~~   96 (335)
T 1rpn_A           90 VYNLAAQ   96 (335)
T ss_dssp             EEECCSC
T ss_pred             EEECccc
Confidence            9999874

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=95.45  E-value=0.1  Score=46.14  Aligned_cols=88  Identities=14%  Similarity=0.135  Sum_probs=63.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhh---
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET---  250 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~---  250 (307)
                      .|.+|.|+| .|.+|...++.++..|.+|++..++.+.+.+.+.|...    .  ++.+.+ ...|+|+.+++....   
T Consensus       149 ~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~----~--~l~~~l-~~aDvVil~vp~~~~t~~  220 (334)
T 2dbq_A          149 YGKTIGIIG-LGRIGQAIAKRAKGFNMRILYYSRTRKEEVERELNAEF----K--PLEDLL-RESDFVVLAVPLTRETYH  220 (334)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHCCEE----C--CHHHHH-HHCSEEEECCCCCTTTTT
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHhCCCEEEEECCCcchhhHhhcCccc----C--CHHHHH-hhCCEEEECCCCChHHHH
Confidence            578999999 59999999999999999999887765555455566531    1  232322 247999999876531   


Q ss_pred             -H-HHHHhcccCCcEEEEecc
Q 021831          251 -E-RLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       251 -~-~~~~~~l~~~G~~v~~g~  269 (307)
                       + ......|+++..++.++.
T Consensus       221 ~i~~~~~~~mk~~ailIn~sr  241 (334)
T 2dbq_A          221 LINEERLKLMKKTAILINIAR  241 (334)
T ss_dssp             CBCHHHHHHSCTTCEEEECSC
T ss_pred             hhCHHHHhcCCCCcEEEECCC
Confidence             2 345677889998888874

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=95.44  E-value=0.021  Score=50.15  Aligned_cols=98  Identities=12%  Similarity=0.147  Sum_probs=59.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--HHHHHHcCCceEE--eCCChh-HHHHhcC-CccEEEECCCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDRVLAAGAEQAV--DYSSKD-IELAIKG-KFDAVLDTIGA  247 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--~~~~~~~g~~~v~--~~~~~~-~~~~~~~-~~dvvid~~g~  247 (307)
                      .+.+|||+||+|.+|..+++.+...|.+|+++.+...  ...+..+....++  |..+.+ +.+.+.. ++|+||+++|.
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~   98 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAA   98 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCcc
Confidence            4679999999999999999999888999999877432  1111122211222  333332 3333322 79999999874


Q ss_pred             hh--------------hHHHHHhccc--CCcEEEEeccCc
Q 021831          248 PE--------------TERLGLNFLK--RGGHYMTLHGET  271 (307)
Q Consensus       248 ~~--------------~~~~~~~~l~--~~G~~v~~g~~~  271 (307)
                      ..              ....+++.+.  ..+++|.++...
T Consensus        99 ~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~  138 (330)
T 2pzm_A           99 YKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTAL  138 (330)
T ss_dssp             CSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGG
T ss_pred             CCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHH
Confidence            21              1122333332  236999888653

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=95.41  E-value=0.042  Score=46.07  Aligned_cols=97  Identities=21%  Similarity=0.215  Sum_probs=62.8

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCcc-HHHHHHc----CCceEEeCCChhHH--HHhcCCcc
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKS-IDRVLAA----GAEQAVDYSSKDIE--LAIKGKFD  239 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~~~~~~-~~~~~~~----g~~~v~~~~~~~~~--~~~~~~~d  239 (307)
                      ...++||++||=.|+  +.|..+..+++.-|-  +|+++..+.+ .+.+++.    +--..+..+..+..  ....+.+|
T Consensus        72 ~l~ikpG~~VldlG~--G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vD  149 (233)
T 4df3_A           72 ELPVKEGDRILYLGI--ASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVD  149 (233)
T ss_dssp             CCCCCTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEE
T ss_pred             hcCCCCCCEEEEecC--cCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEE
Confidence            457899999999995  468888899998775  8999966544 3444322    21122222222211  11125799


Q ss_pred             EEEECCCCh----hhHHHHHhcccCCcEEEEe
Q 021831          240 AVLDTIGAP----ETERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       240 vvid~~g~~----~~~~~~~~~l~~~G~~v~~  267 (307)
                      +||......    ..+..+.+.|+|||+++..
T Consensus       150 vVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          150 GLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             EEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence            988765543    2567778899999999875

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=95.36  E-value=0.049  Score=47.78  Aligned_cols=96  Identities=16%  Similarity=0.075  Sum_probs=57.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCceE-EeCCChhHHHHhcCCccEEEECCCChh----
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQA-VDYSSKDIELAIKGKFDAVLDTIGAPE----  249 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~~v-~~~~~~~~~~~~~~~~dvvid~~g~~~----  249 (307)
                      .+|||+||+|.+|..+++.+...|.+|+++.++.. ...+...+...+ .|..+.+.......++|+||.+.+...    
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~   93 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSRPR   93 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC---------
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccCcCCCC
Confidence            48999999999999999999889999999877543 222222233222 233343323333357999999987421    


Q ss_pred             -----------hHHHHHhcccC-C-cEEEEeccCc
Q 021831          250 -----------TERLGLNFLKR-G-GHYMTLHGET  271 (307)
Q Consensus       250 -----------~~~~~~~~l~~-~-G~~v~~g~~~  271 (307)
                                 ....+++.+.+ + +++|.++...
T Consensus        94 ~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~  128 (342)
T 2x4g_A           94 RWQEEVASALGQTNPFYAACLQARVPRILYVGSAY  128 (342)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHH
Confidence                       11233333332 3 6899888653

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=95.36  E-value=0.037  Score=46.88  Aligned_cols=88  Identities=16%  Similarity=0.197  Sum_probs=56.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChh-HHHHhcC-CccEEEECCCChh-----
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD-IELAIKG-KFDAVLDTIGAPE-----  249 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~-~~dvvid~~g~~~-----  249 (307)
                      +|||+||+|.+|...++.+.. |.+|+++.+.....    .+  ...|..+.+ +.+.+.+ ++|+||++.|...     
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~----~~--~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~   74 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ----GG--YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVDKCE   74 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT----TC--EECCTTSHHHHHHHHHHHCCSEEEECCCCCCHHHHH
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC----CC--ceeccCCHHHHHHHHHhcCCCEEEECCcccChhhhh
Confidence            589999999999999888874 89999987765422    12  334544433 3333333 5999999988531     


Q ss_pred             ------------hHHHHHhcc-cCCcEEEEeccCc
Q 021831          250 ------------TERLGLNFL-KRGGHYMTLHGET  271 (307)
Q Consensus       250 ------------~~~~~~~~l-~~~G~~v~~g~~~  271 (307)
                                  ....+++.+ +.++++|.++...
T Consensus        75 ~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~  109 (273)
T 2ggs_A           75 IEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDY  109 (273)
T ss_dssp             HCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGG
T ss_pred             hCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecce
Confidence                        112333333 3467998887643

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=95.36  E-value=0.058  Score=43.88  Aligned_cols=96  Identities=17%  Similarity=0.034  Sum_probs=63.5

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCc--eEEeCCChhHHHHhcCCccEEEECC
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAE--QAVDYSSKDIELAIKGKFDAVLDTI  245 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~dvvid~~  245 (307)
                      ...+.++.+||-+|+  +.|..+..+++. |++++++..+. ..+.+++.+..  .++..+..++  ...+.||+|+...
T Consensus        41 l~~~~~~~~vLdiG~--G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~--~~~~~~D~v~~~~  115 (218)
T 3ou2_A           41 LRAGNIRGDVLELAS--GTGYWTRHLSGL-ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW--TPDRQWDAVFFAH  115 (218)
T ss_dssp             HTTTTSCSEEEEESC--TTSHHHHHHHHH-SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC--CCSSCEEEEEEES
T ss_pred             HhcCCCCCeEEEECC--CCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccC--CCCCceeEEEEec
Confidence            345788899999994  358888888877 88999996554 34555555522  2233322222  1125799998754


Q ss_pred             CC--------hhhHHHHHhcccCCcEEEEecc
Q 021831          246 GA--------PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       246 g~--------~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      .-        ...+..+.+.|+|||.++....
T Consensus       116 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  147 (218)
T 3ou2_A          116 WLAHVPDDRFEAFWESVRSAVAPGGVVEFVDV  147 (218)
T ss_dssp             CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             hhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence            32        3356788899999999988754

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=95.36  E-value=0.037  Score=45.53  Aligned_cols=99  Identities=15%  Similarity=0.168  Sum_probs=62.4

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCcc-HHH----HHHcCCc---eEEeCCChhHHHHhc---
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKS-IDR----VLAAGAE---QAVDYSSKDIELAIK---  235 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~~-~~~----~~~~g~~---~v~~~~~~~~~~~~~---  235 (307)
                      .....++.+||-+|  .+.|..+..+++..  +.+|+++..+.+ .+.    +...|..   .++..+..+......   
T Consensus        53 l~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~  130 (223)
T 3duw_A           53 LVQIQGARNILEIG--TLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEK  130 (223)
T ss_dssp             HHHHHTCSEEEEEC--CTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTT
T ss_pred             HHHhhCCCEEEEec--CCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcC
Confidence            33456789999998  34788888888876  569999865443 332    3444542   233333223222221   


Q ss_pred             -CCccEEEECCCC---hhhHHHHHhcccCCcEEEEecc
Q 021831          236 -GKFDAVLDTIGA---PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       236 -~~~dvvid~~g~---~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                       +.||+||-....   ...+..+.+.|+|||.++.-..
T Consensus       131 ~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~  168 (223)
T 3duw_A          131 YEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDNV  168 (223)
T ss_dssp             CCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred             CCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence             469999854432   2357788899999998887543

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=95.34  E-value=0.018  Score=50.01  Aligned_cols=36  Identities=31%  Similarity=0.402  Sum_probs=32.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~  210 (307)
                      +.+|||+||+|.+|..+++.+...|.+|+++.+...
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~   42 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV   42 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence            578999999999999999999999999999977543

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=95.34  E-value=0.044  Score=48.54  Aligned_cols=89  Identities=15%  Similarity=0.105  Sum_probs=64.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChh---
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE---  249 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~---  249 (307)
                      .|.+|.|+| .|.+|..+++.++.+|++|++..+.. ..+...+.|....      ++.+.+ ...|+|+.++....   
T Consensus       144 ~g~tvGIIG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~------~l~ell-~~aDvV~l~~P~t~~t~  215 (330)
T 4e5n_A          144 DNATVGFLG-MGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQV------ACSELF-ASSDFILLALPLNADTL  215 (330)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEEC------CHHHHH-HHCSEEEECCCCSTTTT
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCceeC------CHHHHH-hhCCEEEEcCCCCHHHH
Confidence            478999999 69999999999999999999987664 5555666665321      233322 23799999887431   


Q ss_pred             -hH-HHHHhcccCCcEEEEeccC
Q 021831          250 -TE-RLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       250 -~~-~~~~~~l~~~G~~v~~g~~  270 (307)
                       .+ ...+..|+++..+|.++-.
T Consensus       216 ~li~~~~l~~mk~gailIN~arg  238 (330)
T 4e5n_A          216 HLVNAELLALVRPGALLVNPCRG  238 (330)
T ss_dssp             TCBCHHHHTTSCTTEEEEECSCG
T ss_pred             HHhCHHHHhhCCCCcEEEECCCC
Confidence             11 4567788999999988843

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=95.33  E-value=0.11  Score=44.39  Aligned_cols=93  Identities=14%  Similarity=0.225  Sum_probs=59.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HHHHHcCCc-eEEeCCChhHHHHhc-CCccEEEECCCChh
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE-QAVDYSSKDIELAIK-GKFDAVLDTIGAPE  249 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~~~~~g~~-~v~~~~~~~~~~~~~-~~~dvvid~~g~~~  249 (307)
                      ++.+++|+|+ |++|.+++..+...|++|+...++.+.  +.+++++.. .+...+..+    +. +++|++|+++|...
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~----~~~~~~DivVn~t~~~~  192 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDE----LEGHEFDLIINATSSGI  192 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGG----GTTCCCSEEEECCSCGG
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHH----hccCCCCEEEECCCCCC
Confidence            5789999997 899999999999999988887665432  234444431 111111111    22 57999999999763


Q ss_pred             hHH---HHHhcccCCcEEEEeccCc
Q 021831          250 TER---LGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       250 ~~~---~~~~~l~~~G~~v~~g~~~  271 (307)
                      .-.   .-...++++..++.+...+
T Consensus       193 ~~~~~~i~~~~l~~~~~v~D~~y~p  217 (271)
T 1nyt_A          193 SGDIPAIPSSLIHPGIYCYDMFYQK  217 (271)
T ss_dssp             GTCCCCCCGGGCCTTCEEEESCCCS
T ss_pred             CCCCCCCCHHHcCCCCEEEEeccCC
Confidence            200   1123467777888877653

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.33  E-value=0.26  Score=44.97  Aligned_cols=97  Identities=15%  Similarity=0.188  Sum_probs=67.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEE-eCCChhHHHHhc-CCccEEEECCCChhh
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAV-DYSSKDIELAIK-GKFDAVLDTIGAPET  250 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~-~~~~~~~~~~~~-~~~dvvid~~g~~~~  250 (307)
                      .+++|+|+|. |.+|+.+++.++..|..|+++..+ ++.+.+++.|...++ |.++.+..+... ..+|+||-++++...
T Consensus         3 ~~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~   81 (413)
T 3l9w_A            3 HGMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQT   81 (413)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHH
Confidence            3567999995 999999999999999999888655 445667778865332 333344444433 579999999998643


Q ss_pred             H---HHHHhcccCCcEEEEeccCc
Q 021831          251 E---RLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       251 ~---~~~~~~l~~~G~~v~~g~~~  271 (307)
                      -   ...++.+.+.-+++.-....
T Consensus        82 n~~i~~~ar~~~p~~~Iiara~~~  105 (413)
T 3l9w_A           82 NLQLTEMVKEHFPHLQIIARARDV  105 (413)
T ss_dssp             HHHHHHHHHHHCTTCEEEEEESSH
T ss_pred             HHHHHHHHHHhCCCCeEEEEECCH
Confidence            2   33444556777777766543

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=95.29  E-value=0.022  Score=48.73  Aligned_cols=92  Identities=18%  Similarity=0.187  Sum_probs=59.5

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHc---CCEEEEEeCCcc-HHHH----HHcCCc---eEEeCCChhHHHHhcCCccE
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVAS---GCHVSATCGSKS-IDRV----LAAGAE---QAVDYSSKDIELAIKGKFDA  240 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~---G~~Vi~~~~~~~-~~~~----~~~g~~---~v~~~~~~~~~~~~~~~~dv  240 (307)
                      +++|.+||=+|  .+.|..+..+++..   |++|+++..+.. .+.+    .+.+..   .++..+..+   .-.+.+|+
T Consensus        68 ~~~~~~vLDlG--cGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~---~~~~~~d~  142 (261)
T 4gek_A           68 VQPGTQVYDLG--CSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRD---IAIENASM  142 (261)
T ss_dssp             CCTTCEEEEET--CTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTT---CCCCSEEE
T ss_pred             CCCCCEEEEEe--CCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccc---cccccccc
Confidence            78999999999  45788888888763   679999976654 3333    333432   222222111   11156898


Q ss_pred             EEECCCC--------hhhHHHHHhcccCCcEEEEec
Q 021831          241 VLDTIGA--------PETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       241 vid~~g~--------~~~~~~~~~~l~~~G~~v~~g  268 (307)
                      |+-...-        ...+..+.+.|+|||+++..-
T Consensus       143 v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e  178 (261)
T 4gek_A          143 VVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSE  178 (261)
T ss_dssp             EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEe
Confidence            8765431        125678889999999998754

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=95.28  E-value=0.06  Score=48.36  Aligned_cols=90  Identities=18%  Similarity=0.191  Sum_probs=65.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChh--
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE--  249 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~-Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~--  249 (307)
                      .|.+|.|+| .|.+|...++.++.+|++ |++..++. ..+.+.+.|...+     .++.+.+ ...|+|+.+++...  
T Consensus       163 ~g~tvgIIG-~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell-~~aDvV~l~~P~t~~t  235 (364)
T 2j6i_A          163 EGKTIATIG-AGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRV-----ENIEELV-AQADIVTVNAPLHAGT  235 (364)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEEC-----SSHHHHH-HTCSEEEECCCCSTTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEec-----CCHHHHH-hcCCEEEECCCCChHH
Confidence            588999999 699999999999999996 98886554 4455666774321     1233333 35899999988641  


Q ss_pred             --hH-HHHHhcccCCcEEEEeccC
Q 021831          250 --TE-RLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       250 --~~-~~~~~~l~~~G~~v~~g~~  270 (307)
                        .+ ...+..|++++.+|.++..
T Consensus       236 ~~li~~~~l~~mk~ga~lIn~arG  259 (364)
T 2j6i_A          236 KGLINKELLSKFKKGAWLVNTARG  259 (364)
T ss_dssp             TTCBCHHHHTTSCTTEEEEECSCG
T ss_pred             HHHhCHHHHhhCCCCCEEEECCCC
Confidence              22 3466788999999988854

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=95.25  E-value=0.057  Score=46.71  Aligned_cols=96  Identities=17%  Similarity=0.139  Sum_probs=58.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCccH--HHHHHcCC----ceEEeCCChhHHHHhcCCccEEEECC
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGA----EQAVDYSSKDIELAIKGKFDAVLDTI  245 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~~--~~~~~~g~----~~v~~~~~~~~~~~~~~~~dvvid~~  245 (307)
                      -.+.+++|+|+ |++|.+++..+...|+ +|+...++.+.  +.+++++.    ..+.....+++.+.+ ..+|+||+|+
T Consensus       125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l-~~~DiVInaT  202 (283)
T 3jyo_A          125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVI-AAADGVVNAT  202 (283)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHH-HHSSEEEECS
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHH-hcCCEEEECC
Confidence            35889999996 8999999999989999 68777766432  22333321    112222222333333 3489999998


Q ss_pred             CChhh----HHHHHhcccCCcEEEEeccC
Q 021831          246 GAPET----ERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       246 g~~~~----~~~~~~~l~~~G~~v~~g~~  270 (307)
                      +....    ...-...++++..++++-.-
T Consensus       203 p~Gm~~~~~~pi~~~~l~~~~~v~DlvY~  231 (283)
T 3jyo_A          203 PMGMPAHPGTAFDVSCLTKDHWVGDVVYM  231 (283)
T ss_dssp             STTSTTSCSCSSCGGGCCTTCEEEECCCS
T ss_pred             CCCCCCCCCCCCCHHHhCCCCEEEEecCC
Confidence            64200    01124567777777776644

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=95.21  E-value=0.23  Score=38.19  Aligned_cols=94  Identities=10%  Similarity=0.082  Sum_probs=58.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-c-HHHHH---HcCCceEEeCC--ChhHHHHh-cCCccEEEECCC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-S-IDRVL---AAGAEQAVDYS--SKDIELAI-KGKFDAVLDTIG  246 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~-~~~~~---~~g~~~v~~~~--~~~~~~~~-~~~~dvvid~~g  246 (307)
                      ..+++|.|+ |.+|...++.+...|.+|+++.+.. + .+.+.   ..|. .++..+  +.+..+.. -.++|+||-+++
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~-~~i~gd~~~~~~l~~a~i~~ad~vi~~~~   80 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNA-DVIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTC-EEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCC-eEEEcCCCCHHHHHHcChhhCCEEEEecC
Confidence            567999995 9999999999999999998887642 2 22232   2243 344333  33333332 257999999999


Q ss_pred             Chhh---HHHHHhcccCCcEEEEeccC
Q 021831          247 APET---ERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       247 ~~~~---~~~~~~~l~~~G~~v~~g~~  270 (307)
                      +...   +....+.+.+..+++..-..
T Consensus        81 ~d~~n~~~~~~a~~~~~~~~ii~~~~~  107 (153)
T 1id1_A           81 NDADNAFVVLSAKDMSSDVKTVLAVSD  107 (153)
T ss_dssp             CHHHHHHHHHHHHHHTSSSCEEEECSS
T ss_pred             ChHHHHHHHHHHHHHCCCCEEEEEECC
Confidence            8632   22233444455566664433

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=95.20  E-value=0.029  Score=49.42  Aligned_cols=74  Identities=18%  Similarity=0.269  Sum_probs=46.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCc---cHHHHHHcC---CceEE--eCCChh-HHHHhcC-CccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSK---SIDRVLAAG---AEQAV--DYSSKD-IELAIKG-KFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G--~~Vi~~~~~~---~~~~~~~~g---~~~v~--~~~~~~-~~~~~~~-~~dvv  241 (307)
                      .+.+|||+||+|.+|..+++.+...|  .+|++..+..   ....+..+.   ...++  |..+.+ +.+.+.+ ++|+|
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V  102 (346)
T 4egb_A           23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQVI  102 (346)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCEE
T ss_pred             CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCEE
Confidence            46789999999999999999998888  5777776543   122222221   11222  333333 3333333 59999


Q ss_pred             EECCCC
Q 021831          242 LDTIGA  247 (307)
Q Consensus       242 id~~g~  247 (307)
                      |.+++.
T Consensus       103 ih~A~~  108 (346)
T 4egb_A          103 VNFAAE  108 (346)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999874

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=95.18  E-value=0.027  Score=49.17  Aligned_cols=95  Identities=21%  Similarity=0.168  Sum_probs=62.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc---eEEeCCChhHHHHhcCCccEEEE
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE---QAVDYSSKDIELAIKGKFDAVLD  243 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~---~v~~~~~~~~~~~~~~~~dvvid  243 (307)
                      ++++++||-+|.  +.|..+..+++..|++|+++..+.. .+.    +...+..   .++..+..++. ...+.||+|+.
T Consensus       115 ~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~V~~  191 (312)
T 3vc1_A          115 AGPDDTLVDAGC--GRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP-FDKGAVTASWN  191 (312)
T ss_dssp             CCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-CCTTCEEEEEE
T ss_pred             CCCCCEEEEecC--CCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC-CCCCCEeEEEE
Confidence            788999999983  4688888888887899999965543 333    3334432   22322222111 01157999987


Q ss_pred             CC-----CChhhHHHHHhcccCCcEEEEecc
Q 021831          244 TI-----GAPETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       244 ~~-----g~~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      .-     .-...+..+.+.|+|||+++....
T Consensus       192 ~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~  222 (312)
T 3vc1_A          192 NESTMYVDLHDLFSEHSRFLKVGGRYVTITG  222 (312)
T ss_dssp             ESCGGGSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CCchhhCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence            42     224477888999999999998763

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=95.17  E-value=0.037  Score=45.82  Aligned_cols=96  Identities=19%  Similarity=0.273  Sum_probs=63.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcC-------CEEEEEeCCcc-HHHH----HHcC-------CceEEeCCChh-H
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASG-------CHVSATCGSKS-IDRV----LAAG-------AEQAVDYSSKD-I  230 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G-------~~Vi~~~~~~~-~~~~----~~~g-------~~~v~~~~~~~-~  230 (307)
                      .++++++||-+|+ | .|..+..+++..+       .+|+++..++. .+.+    ...+       .-.+...+..+ +
T Consensus        81 ~~~~~~~VLdiG~-G-~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~  158 (227)
T 1r18_A           81 HLKPGARILDVGS-G-SGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY  158 (227)
T ss_dssp             TCCTTCEEEEESC-T-TSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC
T ss_pred             hCCCCCEEEEECC-C-ccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCC
Confidence            5789999999994 4 4888888888766       48998865543 2222    2222       22233332222 1


Q ss_pred             HHHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          231 ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       231 ~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ..  .+.||+|+...........+.+.|++||+++..-.+
T Consensus       159 ~~--~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~~~~  196 (227)
T 1r18_A          159 PP--NAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVGP  196 (227)
T ss_dssp             GG--GCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEESC
T ss_pred             Cc--CCCccEEEECCchHHHHHHHHHHhcCCCEEEEEEec
Confidence            11  157999998877665668899999999998876543

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=95.17  E-value=0.097  Score=47.44  Aligned_cols=90  Identities=14%  Similarity=0.052  Sum_probs=63.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChh---
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE---  249 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~---  249 (307)
                      .|.+|.|+| .|.+|..+++.++.+|++|++..+.. ..+...+.|...+     .++.+.+ ...|+|+.++....   
T Consensus       190 ~gktvGIIG-lG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~-----~~l~ell-~~aDvV~l~~Plt~~t~  262 (393)
T 2nac_A          190 EAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWH-----ATREDMY-PVCDVVTLNCPLHPETE  262 (393)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEEC-----SSHHHHG-GGCSEEEECSCCCTTTT
T ss_pred             CCCEEEEEe-ECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceec-----CCHHHHH-hcCCEEEEecCCchHHH
Confidence            588999999 69999999999999999999886653 4455566675421     1233332 45899998887431   


Q ss_pred             -hH-HHHHhcccCCcEEEEeccC
Q 021831          250 -TE-RLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       250 -~~-~~~~~~l~~~G~~v~~g~~  270 (307)
                       .+ ...+..|+++..+|.++..
T Consensus       263 ~li~~~~l~~mk~gailIN~aRG  285 (393)
T 2nac_A          263 HMINDETLKLFKRGAYIVNTARG  285 (393)
T ss_dssp             TCBSHHHHTTSCTTEEEEECSCG
T ss_pred             HHhhHHHHhhCCCCCEEEECCCc
Confidence             12 3566778888888887743

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.16  E-value=0.2  Score=42.20  Aligned_cols=72  Identities=26%  Similarity=0.362  Sum_probs=51.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeC-CccHHHHHHcCCceEEeCCChhH-HHH----hcCCccEEEECCCCh
Q 021831          177 RLLVLGGGGAVGFAAVQFSVAS-GCHVSATCG-SKSIDRVLAAGAEQAVDYSSKDI-ELA----IKGKFDAVLDTIGAP  248 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~-~~~----~~~~~dvvid~~g~~  248 (307)
                      +|.|.|++|.+|...++.+... +.++++..+ .++.+.+...+++.++|.+.++. .+.    +..+.++|+.++|-.
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTTG~~   80 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFT   80 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCCEEEECSCTTTHHHHHHHHHHTTCEEEECCCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCcEEEEccChHHHHHHHHHHHHcCCCEEEcCCCCC
Confidence            6899999999999999988765 788887744 44444443446788888886542 222    225899999998854

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=95.16  E-value=0.064  Score=44.17  Aligned_cols=97  Identities=24%  Similarity=0.261  Sum_probs=62.8

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCcc-HHHH----HHcC-------CceEEeCCChhHHHHhcC
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKS-IDRV----LAAG-------AEQAVDYSSKDIELAIKG  236 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G--~~Vi~~~~~~~-~~~~----~~~g-------~~~v~~~~~~~~~~~~~~  236 (307)
                      .++++++||-+|+ | .|..+..+++..|  .+|+++..+.. .+.+    ...+       .-.+...+..... ...+
T Consensus        74 ~~~~~~~vLDiG~-G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~  150 (226)
T 1i1n_A           74 QLHEGAKALDVGS-G-SGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY-AEEA  150 (226)
T ss_dssp             TSCTTCEEEEETC-T-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC-GGGC
T ss_pred             hCCCCCEEEEEcC-C-cCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCc-ccCC
Confidence            3788999999994 4 4888888888776  58998865543 2322    2322       1122222211100 0125


Q ss_pred             CccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          237 KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       237 ~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      .||+|+....-......+.+.|++||+++..-.+
T Consensus       151 ~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~~~  184 (226)
T 1i1n_A          151 PYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGP  184 (226)
T ss_dssp             CEEEEEECSBBSSCCHHHHHTEEEEEEEEEEESC
T ss_pred             CcCEEEECCchHHHHHHHHHhcCCCcEEEEEEec
Confidence            7999998776655678889999999999886544

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=95.15  E-value=0.043  Score=49.01  Aligned_cols=96  Identities=16%  Similarity=0.162  Sum_probs=61.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCceE------------EeCCC-h-hH-HHHhc-
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQA------------VDYSS-K-DI-ELAIK-  235 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~~v------------~~~~~-~-~~-~~~~~-  235 (307)
                      -.|++|.|.| .|.+|+.+++.++.+|++|++...... .+..++++++.+            +.... . .. .+.+. 
T Consensus       173 L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v~~~ell~~~~DIliP~A~~~~I~~~~~~~  251 (355)
T 1c1d_A          173 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPCAMGGVITTEVART  251 (355)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEECSCSCCBCHHHHHH
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEeChHHhhcCccceecHhHHHhhcCHHHHhh
Confidence            4789999999 599999999999999999995543322 334555665322            10000 0 00 01111 


Q ss_pred             CCccEEEECCCChhhHHHHHhcccCCcEEEEecc
Q 021831          236 GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       236 ~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      -+.++|+|+..++.....+...|+.+|.++.-+.
T Consensus       252 lk~~iVie~AN~p~t~~eA~~~L~~~gIlv~Pd~  285 (355)
T 1c1d_A          252 LDCSVVAGAANNVIADEAASDILHARGILYAPDF  285 (355)
T ss_dssp             CCCSEECCSCTTCBCSHHHHHHHHHTTCEECCHH
T ss_pred             CCCCEEEECCCCCCCCHHHHHHHHhCCEEEECCe
Confidence            2578999988887443467788888887776543

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=95.15  E-value=0.034  Score=48.93  Aligned_cols=98  Identities=13%  Similarity=0.149  Sum_probs=59.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--HHHHHHcCCceEE--eCCChh-HHHHhcC-CccEEEECCCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDRVLAAGAEQAV--DYSSKD-IELAIKG-KFDAVLDTIGA  247 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--~~~~~~~g~~~v~--~~~~~~-~~~~~~~-~~dvvid~~g~  247 (307)
                      .+.+|||+||+|.+|..+++.+...|.+|+++.+...  .+.+..+....++  |..+.+ +.+.+.+ .+|+||++.+.
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~   99 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAAS   99 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECcee
Confidence            4678999999999999999988888999999876532  1112111111222  333332 3333332 59999999874


Q ss_pred             hh--------------hHHHHHhcccC--CcEEEEeccCc
Q 021831          248 PE--------------TERLGLNFLKR--GGHYMTLHGET  271 (307)
Q Consensus       248 ~~--------------~~~~~~~~l~~--~G~~v~~g~~~  271 (307)
                      ..              ....+++.+.+  .+++|.++...
T Consensus       100 ~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~  139 (333)
T 2q1w_A          100 YKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTAL  139 (333)
T ss_dssp             CSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGG
T ss_pred             cCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHH
Confidence            21              11233333332  36899888643

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=95.14  E-value=0.025  Score=50.26  Aligned_cols=73  Identities=18%  Similarity=0.257  Sum_probs=46.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCccHHHHHHc-CCceEEeCCChh-HHHHhcC----CccEEEECCCC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSIDRVLAA-GAEQAVDYSSKD-IELAIKG----KFDAVLDTIGA  247 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~~~~~~~~~~-g~~~v~~~~~~~-~~~~~~~----~~dvvid~~g~  247 (307)
                      +.+|||+||+|.+|..+++.+...| .+|+++.+.........+ +.....|..+.+ +...+.+    ++|+||.+++.
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A~~  125 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGAC  125 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCceEeeecCcHHHHHHHHhhcccCCCCEEEECCcc
Confidence            5789999999999999999998889 799988765432211111 111112333333 2233333    69999999874

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=95.12  E-value=0.053  Score=48.32  Aligned_cols=90  Identities=11%  Similarity=0.147  Sum_probs=60.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCccHHH-HHH----c-CCceEEeCCChhHHHHhcCCccEEEECCCCh
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSIDR-VLA----A-GAEQAVDYSSKDIELAIKGKFDAVLDTIGAP  248 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~~~~-~~~----~-g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~  248 (307)
                      -+|.|+||+|.+|...++++..+.- +++.+.+..+... ..+    + +... +...+.+   .+ .++|+||.|+|..
T Consensus         5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~-~~~~~~~---~~-~~vDvV~~a~g~~   79 (345)
T 2ozp_A            5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTN-LKFVPPE---KL-EPADILVLALPHG   79 (345)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCC-CBCBCGG---GC-CCCSEEEECCCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCccc-ccccchh---Hh-cCCCEEEEcCCcH
Confidence            4799999999999999998876664 7777755332211 111    1 1011 1111112   23 5799999999988


Q ss_pred             hhHHHHHhcccCCcEEEEeccC
Q 021831          249 ETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       249 ~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      .+...+..+++.|-++|+.+..
T Consensus        80 ~s~~~a~~~~~aG~~VId~Sa~  101 (345)
T 2ozp_A           80 VFAREFDRYSALAPVLVDLSAD  101 (345)
T ss_dssp             HHHHTHHHHHTTCSEEEECSST
T ss_pred             HHHHHHHHHHHCCCEEEEcCcc
Confidence            6777777788888899998875

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.05  E-value=0.073  Score=43.33  Aligned_cols=93  Identities=15%  Similarity=0.070  Sum_probs=56.5

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHc-CC-----------------ceEEeCC--C
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAA-GA-----------------EQAVDYS--S  227 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~-g~-----------------~~v~~~~--~  227 (307)
                      ...+.++.+||-.|  .+.|..+..+++. |++|+++.-++. .+.+++. ..                 -..+..+  +
T Consensus        17 ~l~~~~~~~vLD~G--CG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~   93 (203)
T 1pjz_A           17 SLNVVPGARVLVPL--CGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFA   93 (203)
T ss_dssp             HHCCCTTCEEEETT--TCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSS
T ss_pred             hcccCCCCEEEEeC--CCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcccc
Confidence            34567899999998  3467778888876 899999965543 4444322 11                 1122222  2


Q ss_pred             hhHHHHhcCCccEEEECCCC--------hhhHHHHHhcccCCcEEEE
Q 021831          228 KDIELAIKGKFDAVLDTIGA--------PETERLGLNFLKRGGHYMT  266 (307)
Q Consensus       228 ~~~~~~~~~~~dvvid~~g~--------~~~~~~~~~~l~~~G~~v~  266 (307)
                      ..+..  .+.||+|++...-        ...+..+.+.|+|||++++
T Consensus        94 l~~~~--~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l  138 (203)
T 1pjz_A           94 LTARD--IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLL  138 (203)
T ss_dssp             STHHH--HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEE
T ss_pred             CCccc--CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence            22221  1369999974321        1245678889999999333

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=95.05  E-value=0.08  Score=46.35  Aligned_cols=73  Identities=21%  Similarity=0.213  Sum_probs=49.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH---HHHHHcCC---ceEE--eCCCh-hHHHHhcC-CccEEEEC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAGA---EQAV--DYSSK-DIELAIKG-KFDAVLDT  244 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~---~~~~~~g~---~~v~--~~~~~-~~~~~~~~-~~dvvid~  244 (307)
                      +.+|||+||+|.+|..+++.+...|.+|+++.+....   ..++.++.   ...+  |..+. ++.+.+.+ ++|+||++
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   82 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNL   82 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence            5789999999999999999888889999998775432   23444321   1122  33333 23333333 57999999


Q ss_pred             CCC
Q 021831          245 IGA  247 (307)
Q Consensus       245 ~g~  247 (307)
                      .|.
T Consensus        83 A~~   85 (345)
T 2z1m_A           83 AAQ   85 (345)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            884

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=95.04  E-value=0.07  Score=46.80  Aligned_cols=96  Identities=11%  Similarity=0.132  Sum_probs=58.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCcc-HHH----HHHc----CCc-eEEeCCChhH-HHHhcCCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDR----VLAA----GAE-QAVDYSSKDI-ELAIKGKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~-~~~----~~~~----g~~-~v~~~~~~~~-~~~~~~~~dvv  241 (307)
                      .+.++||+|+ |+.|.+++..+...|+ +|+...|+.+ .+.    ++++    +.. .+++..+.++ .+.+ ..+|+|
T Consensus       147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l-~~~DiI  224 (312)
T 3t4e_A          147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEAL-ASADIL  224 (312)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHH-HHCSEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhc-cCceEE
Confidence            5889999996 9999999999999999 7877777622 111    2222    221 2344443211 2222 348999


Q ss_pred             EECCCChh--hHHH----HHhcccCCcEEEEeccCc
Q 021831          242 LDTIGAPE--TERL----GLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       242 id~~g~~~--~~~~----~~~~l~~~G~~v~~g~~~  271 (307)
                      |+|++...  ....    -...+.++..++++-..+
T Consensus       225 INaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P  260 (312)
T 3t4e_A          225 TNGTKVGMKPLENESLIGDVSLLRPELLVTECVYNP  260 (312)
T ss_dssp             EECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCCSS
T ss_pred             EECCcCCCCCCCCCcccCCHHHcCCCCEEEEeccCC
Confidence            99987531  0011    124567777777776543

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=95.04  E-value=0.083  Score=46.80  Aligned_cols=87  Identities=17%  Similarity=0.164  Sum_probs=59.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChh----
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE----  249 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~----  249 (307)
                      .|.+|.|+| .|.+|...++.++..|++|++..++.+.+...+.|...    .  ++.+.+ ...|+|+.+++...    
T Consensus       145 ~g~~vgIIG-~G~iG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~----~--~l~e~l-~~aDiVil~vp~~~~t~~  216 (333)
T 2d0i_A          145 YGKKVGILG-MGAIGKAIARRLIPFGVKLYYWSRHRKVNVEKELKARY----M--DIDELL-EKSDIVILALPLTRDTYH  216 (333)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCHHHHHHHTEEE----C--CHHHHH-HHCSEEEECCCCCTTTTT
T ss_pred             CcCEEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCcchhhhhhcCcee----c--CHHHHH-hhCCEEEEcCCCChHHHH
Confidence            578999999 59999999999999999999887765554455555421    1  222222 23788888887641    


Q ss_pred             hH-HHHHhcccCCcEEEEecc
Q 021831          250 TE-RLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       250 ~~-~~~~~~l~~~G~~v~~g~  269 (307)
                      .+ ...+..|+++ .++.++.
T Consensus       217 ~i~~~~~~~mk~g-ilin~sr  236 (333)
T 2d0i_A          217 IINEERVKKLEGK-YLVNIGR  236 (333)
T ss_dssp             SBCHHHHHHTBTC-EEEECSC
T ss_pred             HhCHHHHhhCCCC-EEEECCC
Confidence            12 2345677788 7777663

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=95.04  E-value=0.092  Score=43.28  Aligned_cols=98  Identities=17%  Similarity=0.245  Sum_probs=61.8

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCC-ceEEeCCChhHHHHhcCCccEEE
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGA-EQAVDYSSKDIELAIKGKFDAVL  242 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~-~~v~~~~~~~~~~~~~~~~dvvi  242 (307)
                      ...++++++||=.|+ |..|..+..+++..+.+|+++..+.. .+.    ++..+. ..++..+...+.....+.||+|+
T Consensus        50 ~~~~~~~~~vLDlG~-G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~  128 (230)
T 3evz_A           50 KTFLRGGEVALEIGT-GHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIF  128 (230)
T ss_dssp             HTTCCSSCEEEEECC-TTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEE
T ss_pred             HhhcCCCCEEEEcCC-CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEE
Confidence            345678999999984 54788888888776789999965543 333    334443 23333331111111125799998


Q ss_pred             ECCC---------------------C----hhhHHHHHhcccCCcEEEEe
Q 021831          243 DTIG---------------------A----PETERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       243 d~~g---------------------~----~~~~~~~~~~l~~~G~~v~~  267 (307)
                      -.-.                     +    ...+..+.+.|++||+++.+
T Consensus       129 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  178 (230)
T 3evz_A          129 SAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY  178 (230)
T ss_dssp             ECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             ECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence            5421                     0    33578888999999999885

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=95.03  E-value=0.18  Score=37.66  Aligned_cols=91  Identities=14%  Similarity=0.097  Sum_probs=55.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHH-HcCCceEE-eCCChhHHHHh-cCCccEEEECCCChhh
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVL-AAGAEQAV-DYSSKDIELAI-KGKFDAVLDTIGAPET  250 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~-~~g~~~v~-~~~~~~~~~~~-~~~~dvvid~~g~~~~  250 (307)
                      +.+|+|+|+ |.+|...++.+...|.+|+++.++.+ .+.+. ..+...+. +..+.+..... ..++|+||.+++....
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~   82 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEV   82 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchH
Confidence            468999995 99999999999889999888866543 33333 34543221 22232222222 2579999999998632


Q ss_pred             ---HHHHHhcccCCcEEEEe
Q 021831          251 ---ERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       251 ---~~~~~~~l~~~G~~v~~  267 (307)
                         +..+.+.+.++ +++..
T Consensus        83 ~~~~~~~~~~~~~~-~ii~~  101 (140)
T 1lss_A           83 NLMSSLLAKSYGIN-KTIAR  101 (140)
T ss_dssp             HHHHHHHHHHTTCC-CEEEE
T ss_pred             HHHHHHHHHHcCCC-EEEEE
Confidence               22333444554 55543

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=95.00  E-value=0.037  Score=46.17  Aligned_cols=97  Identities=18%  Similarity=0.250  Sum_probs=61.3

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCcc-HHHH----HHcCCc---eEEeCCChhHHHHhc----
Q 021831          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKS-IDRV----LAAGAE---QAVDYSSKDIELAIK----  235 (307)
Q Consensus       170 ~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~~-~~~~----~~~g~~---~v~~~~~~~~~~~~~----  235 (307)
                      ....++++||-+|.  +.|..+..+++..  +.+++++..+++ .+.+    +..|..   .++..+..+....+.    
T Consensus        68 ~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~  145 (232)
T 3cbg_A           68 ISLTGAKQVLEIGV--FRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKP  145 (232)
T ss_dssp             HHHHTCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSS
T ss_pred             HHhcCCCEEEEecC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCC
Confidence            34456789999993  4888999999876  468999865543 3333    334542   223333223222221    


Q ss_pred             -CCccEEEECCCC---hhhHHHHHhcccCCcEEEEec
Q 021831          236 -GKFDAVLDTIGA---PETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       236 -~~~dvvid~~g~---~~~~~~~~~~l~~~G~~v~~g  268 (307)
                       +.||+||-....   ...+..+.+.|++||.++.--
T Consensus       146 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~  182 (232)
T 3cbg_A          146 LPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDN  182 (232)
T ss_dssp             CCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred             CCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence             569999854332   235788889999999998754

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=94.99  E-value=0.044  Score=47.47  Aligned_cols=69  Identities=25%  Similarity=0.263  Sum_probs=44.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HHHHHcCCc-eEEeCCChhHHHHhcCCccEEEECCCC
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAE-QAVDYSSKDIELAIKGKFDAVLDTIGA  247 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~~~~g~~-~v~~~~~~~~~~~~~~~~dvvid~~g~  247 (307)
                      +|||+||+|.+|...++.+...|.+|+++.+.... ......+.. ...|..+.++.+.+ .+ |+||++.+.
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~-d~vih~A~~   72 (312)
T 3ko8_A            2 RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYSWGAGI-KG-DVVFHFAAN   72 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTTTTTTC-CC-SEEEECCSS
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHHHHhhc-CC-CEEEECCCC
Confidence            69999999999999999999999999998764331 111111221 11233333322222 34 999999883

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=94.98  E-value=0.06  Score=50.05  Aligned_cols=94  Identities=16%  Similarity=0.258  Sum_probs=59.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCccH-HHH-HHcCCce-EEeCCCh-hHHHHhcCCccEEEECCCCh
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRV-LAAGAEQ-AVDYSSK-DIELAIKGKFDAVLDTIGAP  248 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~~~~-~~~-~~~g~~~-v~~~~~~-~~~~~~~~~~dvvid~~g~~  248 (307)
                      .+.+|+|+|+ |.+|..++..+... |.+|++..++.+. +.+ ...+... .++..+. ++.+.+ .++|+||++++..
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l-~~~DvVIn~tp~~   99 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVL-ADNDVVISLIPYT   99 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHH-HTSSEEEECSCGG
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHH-cCCCEEEECCchh
Confidence            3578999996 99999998888877 5687777766433 222 2223322 2233332 333333 4699999999975


Q ss_pred             hhHHHHHhcccCCcEEEEecc
Q 021831          249 ETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       249 ~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      ........+++.+-.++....
T Consensus       100 ~~~~v~~a~l~~g~~vvd~~~  120 (467)
T 2axq_A          100 FHPNVVKSAIRTKTDVVTSSY  120 (467)
T ss_dssp             GHHHHHHHHHHHTCEEEECSC
T ss_pred             hhHHHHHHHHhcCCEEEEeec
Confidence            333334456777777777654

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=94.96  E-value=0.1  Score=46.16  Aligned_cols=88  Identities=11%  Similarity=0.045  Sum_probs=62.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhh---
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET---  250 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~---  250 (307)
                      .|.+|.|+| .|.+|...++.++.+|++|++..+..+.. +.+. ...    . .++.+.+ ...|+|+.+++....   
T Consensus       145 ~g~~vgIiG-~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~-~~~----~-~~l~ell-~~aDvV~l~~p~~~~t~~  215 (333)
T 1j4a_A          145 RDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPE-LEKK-GYY----V-DSLDDLY-KQADVISLHVPDVPANVH  215 (333)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHT-TCB----C-SCHHHHH-HHCSEEEECSCCCGGGTT
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEECCCcchh-HHhh-Cee----c-CCHHHHH-hhCCEEEEcCCCcHHHHH
Confidence            478999999 59999999999999999999887665544 3332 221    1 1233322 348999999886422   


Q ss_pred             -H-HHHHhcccCCcEEEEeccC
Q 021831          251 -E-RLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       251 -~-~~~~~~l~~~G~~v~~g~~  270 (307)
                       + ...+..|++++.+|.++..
T Consensus       216 li~~~~l~~mk~ga~lIn~arg  237 (333)
T 1j4a_A          216 MINDESIAKMKQDVVIVNVSRG  237 (333)
T ss_dssp             CBSHHHHHHSCTTEEEEECSCG
T ss_pred             HHhHHHHhhCCCCcEEEECCCC
Confidence             1 3466789999999998854

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=94.96  E-value=0.094  Score=46.01  Aligned_cols=87  Identities=21%  Similarity=0.293  Sum_probs=60.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHHH--cCCEEEEEeCCc--c--HHHHHHcCCceEEeCCChhHHHHhc----CCccEEEECC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVA--SGCHVSATCGSK--S--IDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTI  245 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~--~G~~Vi~~~~~~--~--~~~~~~~g~~~v~~~~~~~~~~~~~----~~~dvvid~~  245 (307)
                      -+|.|+| +|.+|...+..+..  .+++++.+++.+  +  +..++++|....  .  .++.+.+.    .++|+||+++
T Consensus         5 irVaIIG-~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~--~--~~~e~ll~~~~~~~iDvV~~at   79 (312)
T 1nvm_B            5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTT--Y--AGVEGLIKLPEFADIDFVFDAT   79 (312)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEE--S--SHHHHHHHSGGGGGEEEEEECS
T ss_pred             CEEEEEc-CcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcc--c--CCHHHHHhccCCCCCcEEEECC
Confidence            5799999 69999988887743  466777765432  3  344667776422  1  23333322    3689999999


Q ss_pred             CChhhHHHHHhcccC--CcEEEEe
Q 021831          246 GAPETERLGLNFLKR--GGHYMTL  267 (307)
Q Consensus       246 g~~~~~~~~~~~l~~--~G~~v~~  267 (307)
                      +.......+..+++.  |.++++.
T Consensus        80 p~~~h~~~a~~al~a~~Gk~Vi~e  103 (312)
T 1nvm_B           80 SASAHVQNEALLRQAKPGIRLIDL  103 (312)
T ss_dssp             CHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             ChHHHHHHHHHHHHhCCCCEEEEc
Confidence            987777888888888  8888773

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=94.95  E-value=0.051  Score=47.24  Aligned_cols=71  Identities=20%  Similarity=0.223  Sum_probs=45.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-Ccc----HHHHHHcCC----ceE--EeCCCh-hHHHHhcCCccEEE
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKS----IDRVLAAGA----EQA--VDYSSK-DIELAIKGKFDAVL  242 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~----~~~~~~~g~----~~v--~~~~~~-~~~~~~~~~~dvvi  242 (307)
                      |.+|||+||+|.+|..+++.+...|.+|+++.+ ...    ...+..+..    ..+  .|..+. ++.+.+ .++|+||
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~d~vi   79 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAI-EGCVGIF   79 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHH-TTCSEEE
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHH-cCCCEEE
Confidence            568999999999999999988889999998865 321    112222211    011  133333 333333 5689999


Q ss_pred             ECCC
Q 021831          243 DTIG  246 (307)
Q Consensus       243 d~~g  246 (307)
                      .+.+
T Consensus        80 h~A~   83 (322)
T 2p4h_X           80 HTAS   83 (322)
T ss_dssp             ECCC
T ss_pred             EcCC
Confidence            9875

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=94.91  E-value=0.027  Score=48.24  Aligned_cols=58  Identities=9%  Similarity=0.170  Sum_probs=42.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCCh-hHHHHhcC-CccEEEECCCC
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK-DIELAIKG-KFDAVLDTIGA  247 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~-~~dvvid~~g~  247 (307)
                      +|||+||+|.+|...++.+...|.+|+++.+.+             .|..+. .+.+.+.. ++|+||++.+.
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-------------~D~~d~~~~~~~~~~~~~d~vi~~a~~   66 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKL-------------LDITNISQVQQVVQEIRPHIIIHCAAY   66 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT-------------SCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEecccc-------------cCCCCHHHHHHHHHhcCCCEEEECCcc
Confidence            799999999999999999888899999998732             122232 23333333 68999998874

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=94.88  E-value=0.025  Score=46.80  Aligned_cols=99  Identities=16%  Similarity=0.113  Sum_probs=63.6

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHc----CCceEEeCCChhHHHHhcCCccEEE
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAA----GAEQAVDYSSKDIELAIKGKFDAVL  242 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~----g~~~v~~~~~~~~~~~~~~~~dvvi  242 (307)
                      ....++++++||-+|. | .|..+..+++. +.+|+++..+.. .+.+++.    +...++..+..+.. ...+.||+|+
T Consensus        64 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~  139 (231)
T 1vbf_A           64 DELDLHKGQKVLEIGT-G-IGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGY-EEEKPYDRVV  139 (231)
T ss_dssp             HHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCC-GGGCCEEEEE
T ss_pred             HhcCCCCCCEEEEEcC-C-CCHHHHHHHHH-cCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCccccc-ccCCCccEEE
Confidence            3567889999999994 4 48888888876 478999865543 3444332    21223333222200 0125799999


Q ss_pred             ECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          243 DTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       243 d~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ....-......+.+.|++||+++..-..
T Consensus       140 ~~~~~~~~~~~~~~~L~pgG~l~~~~~~  167 (231)
T 1vbf_A          140 VWATAPTLLCKPYEQLKEGGIMILPIGV  167 (231)
T ss_dssp             ESSBBSSCCHHHHHTEEEEEEEEEEECS
T ss_pred             ECCcHHHHHHHHHHHcCCCcEEEEEEcC
Confidence            8765543456788999999999877544

>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*

Probab=94.87  E-value=0.15  Score=45.43  Aligned_cols=94  Identities=15%  Similarity=0.145  Sum_probs=67.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCccH----HHHHHcCCceEEeCCChh--------------HHHHhc-
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI----DRVLAAGAEQAVDYSSKD--------------IELAIK-  235 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~~~~----~~~~~~g~~~v~~~~~~~--------------~~~~~~-  235 (307)
                      .+|.|+|++|.+|..+..+.+.+ +++|++++-..+.    +++++++...+.-.++.+              +.+.+. 
T Consensus         4 k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a~~n~~~l~~q~~~f~p~~v~v~~~~~~~~~l~~~~~G~~~l~el~~~   83 (376)
T 3a06_A            4 RTLVILGATGSIGTQTLDVLKKVKGIRLIGISFHSNLELAFKIVKEFNVKNVAITGDVEFEDSSINVWKGSHSIEEMLEA   83 (376)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEESSCHHHHHHHHHHHTCCEEEECSSCCCCCSSSEEEESTTHHHHHHHH
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEccCCHHHHHHHHHHcCCCEEEEccHHHHHHHHHHHccCHHHHHHHhcC
Confidence            57999999999999999999887 4688888433332    335678887664333222              133333 


Q ss_pred             CCccEEEECCCChhhHHHHHhcccCCcEEEEecc
Q 021831          236 GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       236 ~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      ..+|+|+.++.+...+...+..++.|-++.+.-.
T Consensus        84 ~~~D~Vv~AivG~aGL~ptlaAi~aGK~vaLANK  117 (376)
T 3a06_A           84 LKPDITMVAVSGFSGLRAVLASLEHSKRVCLANK  117 (376)
T ss_dssp             HCCSEEEECCCSTTHHHHHHHHHHHCSEEEECCS
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEeCh
Confidence            4699999998887788888888988888777443

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=94.85  E-value=0.17  Score=42.23  Aligned_cols=97  Identities=11%  Similarity=0.152  Sum_probs=61.9

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCcc-HHH----HHHcCCc---eEEeCCChhHHHHh-----
Q 021831          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKS-IDR----VLAAGAE---QAVDYSSKDIELAI-----  234 (307)
Q Consensus       170 ~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~~-~~~----~~~~g~~---~v~~~~~~~~~~~~-----  234 (307)
                      ....++.+||-+|  ++.|..+..+++.+  +.+++++..+.+ .+.    +++.|..   .++..+..+....+     
T Consensus        66 ~~~~~~~~VLeiG--~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~  143 (237)
T 3c3y_A           66 LKLVNAKKTIEVG--VFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQE  143 (237)
T ss_dssp             HHHTTCCEEEEEC--CTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTT
T ss_pred             HHhhCCCEEEEeC--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccC
Confidence            3445678999998  45788888888876  569998855443 333    3445553   23333333333333     


Q ss_pred             -cCCccEEEECCCC---hhhHHHHHhcccCCcEEEEec
Q 021831          235 -KGKFDAVLDTIGA---PETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       235 -~~~~dvvid~~g~---~~~~~~~~~~l~~~G~~v~~g  268 (307)
                       .+.||+||-....   ...+..+.++|++||.++.-.
T Consensus       144 ~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~  181 (237)
T 3c3y_A          144 SEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDN  181 (237)
T ss_dssp             CTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEec
Confidence             3579998855432   235678889999999998743

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=94.84  E-value=0.041  Score=47.44  Aligned_cols=95  Identities=17%  Similarity=0.044  Sum_probs=62.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHH----HHcCCc---eEEeCCChhHHHHhcCCccEEE
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRV----LAAGAE---QAVDYSSKDIELAIKGKFDAVL  242 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~----~~~g~~---~v~~~~~~~~~~~~~~~~dvvi  242 (307)
                      .+.++.+||-+|.  +.|..+..+++..|++|+++..+.. .+.+    ...+..   .+...+..++. ...+.||+|+
T Consensus        79 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~fD~v~  155 (297)
T 2o57_A           79 VLQRQAKGLDLGA--GYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP-CEDNSYDFIW  155 (297)
T ss_dssp             CCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS-SCTTCEEEEE
T ss_pred             CCCCCCEEEEeCC--CCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC-CCCCCEeEEE
Confidence            7789999999993  4788888888888999999966543 2222    233331   22222221110 0014699998


Q ss_pred             ECCCC------hhhHHHHHhcccCCcEEEEec
Q 021831          243 DTIGA------PETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       243 d~~g~------~~~~~~~~~~l~~~G~~v~~g  268 (307)
                      ....-      ...+..+.+.|+|||+++...
T Consensus       156 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~  187 (297)
T 2o57_A          156 SQDAFLHSPDKLKVFQECARVLKPRGVMAITD  187 (297)
T ss_dssp             EESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ecchhhhcCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            75332      236788899999999998875

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=94.84  E-value=0.061  Score=47.22  Aligned_cols=72  Identities=22%  Similarity=0.335  Sum_probs=47.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc--c-HHH---HHHcCCceEE--eCCChh-HHHHhcC-CccEEEECC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK--S-IDR---VLAAGAEQAV--DYSSKD-IELAIKG-KFDAVLDTI  245 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~--~-~~~---~~~~g~~~v~--~~~~~~-~~~~~~~-~~dvvid~~  245 (307)
                      .+|||+||+|.+|..+++.+...|.+|+++.+..  . ...   +...+...++  |..+.+ +.+.+.+ ++|+||.++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   81 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEECC
Confidence            3799999999999999999988999999987532  1 111   2222322233  333332 3333332 499999998


Q ss_pred             CC
Q 021831          246 GA  247 (307)
Q Consensus       246 g~  247 (307)
                      +.
T Consensus        82 ~~   83 (347)
T 1orr_A           82 GQ   83 (347)
T ss_dssp             CC
T ss_pred             cc
Confidence            85

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=94.82  E-value=0.083  Score=45.99  Aligned_cols=93  Identities=15%  Similarity=0.225  Sum_probs=61.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCccH--HHHHHcCCc--eEEeCCChhHHHHhcCCccEEEECCCCh
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGAE--QAVDYSSKDIELAIKGKFDAVLDTIGAP  248 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~~--~~~~~~g~~--~v~~~~~~~~~~~~~~~~dvvid~~g~~  248 (307)
                      .+.+++|+|+ |++|.+++..+...|+ +|+...++.+.  +.+++++..  .+.+.  .++.+.+ .++|+||+|++..
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~--~~~~~~~-~~aDivIn~t~~~  215 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSL--AEAETRL-AEYDIIINTTSVG  215 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECH--HHHHHTG-GGCSEEEECSCTT
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeH--HHHHhhh-ccCCEEEECCCCC
Confidence            5789999996 8999999999999998 88877766432  334555542  23221  1222222 5699999999865


Q ss_pred             hh-----HHHHHhcccCCcEEEEeccC
Q 021831          249 ET-----ERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       249 ~~-----~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ..     .......++++..++++...
T Consensus       216 ~~~~~~~~~i~~~~l~~~~~v~D~~y~  242 (297)
T 2egg_A          216 MHPRVEVQPLSLERLRPGVIVSDIIYN  242 (297)
T ss_dssp             CSSCCSCCSSCCTTCCTTCEEEECCCS
T ss_pred             CCCCCCCCCCCHHHcCCCCEEEEcCCC
Confidence            21     01113457788888888763

>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}

Probab=94.81  E-value=0.13  Score=43.15  Aligned_cols=97  Identities=18%  Similarity=0.165  Sum_probs=61.8

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCcc-----HHHHHHcCCc---eEEeCCChhHHHHh----
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKS-----IDRVLAAGAE---QAVDYSSKDIELAI----  234 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~~-----~~~~~~~g~~---~v~~~~~~~~~~~~----  234 (307)
                      .....++.+||=+|.  +.|..+..+++..  +.+|+++..+.+     .+.++..|..   .++..+..+.....    
T Consensus        55 l~~~~~~~~VLDiG~--G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~  132 (242)
T 3r3h_A           55 LIRLTRAKKVLELGT--FTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEG  132 (242)
T ss_dssp             HHHHHTCSEEEEEES--CCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHH
T ss_pred             HHhhcCcCEEEEeeC--CcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhcc
Confidence            334456789999984  4677788888865  569999854432     3445556643   33333333333333    


Q ss_pred             -cCCccEEEECCCCh---hhHHHHHhcccCCcEEEEe
Q 021831          235 -KGKFDAVLDTIGAP---ETERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       235 -~~~~dvvid~~g~~---~~~~~~~~~l~~~G~~v~~  267 (307)
                       .+.||+||-.....   ..+..+.+.|+|||.++.-
T Consensus       133 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d  169 (242)
T 3r3h_A          133 GEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAID  169 (242)
T ss_dssp             CSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEE
Confidence             36799887544332   2467888999999999873

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=94.80  E-value=0.047  Score=47.12  Aligned_cols=69  Identities=17%  Similarity=0.233  Sum_probs=45.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCccH---HHHHHcCCceEEeCCChhHHHH-hcC----CccEEEECCCC
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI---DRVLAAGAEQAVDYSSKDIELA-IKG----KFDAVLDTIGA  247 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~~~~---~~~~~~g~~~v~~~~~~~~~~~-~~~----~~dvvid~~g~  247 (307)
                      +|||+||+|.+|...++.+...| .+|+++.+....   ..+....  ...|..+.+..+. +.+    ++|+||.+.+.
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~   78 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLN--IADYMDKEDFLIQIMAGEEFGDVEAIFHEGAC   78 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSC--CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcCcce--eccccccHHHHHHHHhccccCCCcEEEECccc
Confidence            48999999999999999998889 789888765432   2222222  1223333333333 333    59999999874

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=94.79  E-value=0.083  Score=44.72  Aligned_cols=33  Identities=27%  Similarity=0.457  Sum_probs=27.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS  208 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~  208 (307)
                      +.+|+|.|+ |++|..+++.+...|. ++..+.+.
T Consensus        31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d   64 (249)
T 1jw9_B           31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFD   64 (249)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCC
Confidence            578999995 9999999999999998 66666443

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=94.77  E-value=0.055  Score=47.65  Aligned_cols=73  Identities=23%  Similarity=0.312  Sum_probs=47.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-----------HHHHHH-cCC-ceEE--eCCChh-HHHHhcC-C
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-----------IDRVLA-AGA-EQAV--DYSSKD-IELAIKG-K  237 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-----------~~~~~~-~g~-~~v~--~~~~~~-~~~~~~~-~  237 (307)
                      +.+|||+||+|.+|..+++.+...|.+|+++.+..+           ...+.+ .+. ..++  |..+.+ +.+.+.. +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS   81 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence            468999999999999999988888999998865321           112222 121 1233  333332 3333332 7


Q ss_pred             ccEEEECCCC
Q 021831          238 FDAVLDTIGA  247 (307)
Q Consensus       238 ~dvvid~~g~  247 (307)
                      +|+||.+.+.
T Consensus        82 ~d~vih~A~~   91 (348)
T 1ek6_A           82 FMAVIHFAGL   91 (348)
T ss_dssp             EEEEEECCSC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=94.73  E-value=0.063  Score=45.53  Aligned_cols=94  Identities=20%  Similarity=0.174  Sum_probs=57.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHH-cCC---------------------c-eEEeCC
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLA-AGA---------------------E-QAVDYS  226 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~-~g~---------------------~-~v~~~~  226 (307)
                      ...++.+||..|  .+.|..+..+++. |++|+++.-++. .+.+++ .+.                     . .++..+
T Consensus        65 ~~~~~~~vLD~G--CG~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  141 (252)
T 2gb4_A           65 KGQSGLRVFFPL--CGKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCS  141 (252)
T ss_dssp             TTCCSCEEEETT--CTTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESC
T ss_pred             cCCCCCeEEEeC--CCCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECc
Confidence            446789999998  3467777777765 999999965544 444432 221                     1 122222


Q ss_pred             ChhHHHHhcCCccEEEECCC-----C---hhhHHHHHhcccCCcEEEEe
Q 021831          227 SKDIELAIKGKFDAVLDTIG-----A---PETERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       227 ~~~~~~~~~~~~dvvid~~g-----~---~~~~~~~~~~l~~~G~~v~~  267 (307)
                      ..++.....+.||+|++...     .   ...+..+.+.|+|||+++++
T Consensus       142 ~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~  190 (252)
T 2gb4_A          142 IFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA  190 (252)
T ss_dssp             TTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred             cccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            22221111157999998532     1   12467788999999998644

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=94.72  E-value=0.062  Score=45.59  Aligned_cols=99  Identities=22%  Similarity=0.252  Sum_probs=63.6

Q ss_pred             HHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHH----HHcCC---ceEEeCCChhHHHHhcCCc
Q 021831          167 KCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRV----LAAGA---EQAVDYSSKDIELAIKGKF  238 (307)
Q Consensus       167 ~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~----~~~g~---~~v~~~~~~~~~~~~~~~~  238 (307)
                      .....++++++||-+|.  +.|..+..+++..+++|+++..+.. .+.+    ...+.   ..+...+..++. ...+.|
T Consensus        54 ~~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~f  130 (273)
T 3bus_A           54 IALLDVRSGDRVLDVGC--GIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP-FEDASF  130 (273)
T ss_dssp             HHHSCCCTTCEEEEESC--TTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-SCTTCE
T ss_pred             HHhcCCCCCCEEEEeCC--CCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC-CCCCCc
Confidence            34667789999999993  4588888899888999999966543 2222    33342   123322221110 001479


Q ss_pred             cEEEECC-----CC-hhhHHHHHhcccCCcEEEEec
Q 021831          239 DAVLDTI-----GA-PETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       239 dvvid~~-----g~-~~~~~~~~~~l~~~G~~v~~g  268 (307)
                      |+|+..-     .+ ...+..+.+.|+|||+++...
T Consensus       131 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~  166 (273)
T 3bus_A          131 DAVWALESLHHMPDRGRALREMARVLRPGGTVAIAD  166 (273)
T ss_dssp             EEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             cEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            9998542     22 236788889999999998765

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=94.72  E-value=0.062  Score=44.20  Aligned_cols=99  Identities=13%  Similarity=0.133  Sum_probs=62.7

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCcc-HHH----HHHcCCc---eEEeCCChhHHHHhc---
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKS-IDR----VLAAGAE---QAVDYSSKDIELAIK---  235 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~~-~~~----~~~~g~~---~v~~~~~~~~~~~~~---  235 (307)
                      .....++.+||-+|.  +.|..+..+++..  +.+|+++..+.. .+.    ++..+..   .++..+..+......   
T Consensus        59 l~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~  136 (225)
T 3tr6_A           59 LVKLMQAKKVIDIGT--FTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAG  136 (225)
T ss_dssp             HHHHHTCSEEEEECC--TTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTT
T ss_pred             HHHhhCCCEEEEeCC--cchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhcc
Confidence            334457889999983  4688888888876  469999865543 333    3344543   233333323333332   


Q ss_pred             --CCccEEEECCCC---hhhHHHHHhcccCCcEEEEecc
Q 021831          236 --GKFDAVLDTIGA---PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       236 --~~~dvvid~~g~---~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                        +.||+|+-....   ...+..+.+.|+|||.++.-..
T Consensus       137 ~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~  175 (225)
T 3tr6_A          137 QAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDNV  175 (225)
T ss_dssp             CTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred             CCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence              579999854442   2356788899999999987543

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=94.68  E-value=0.081  Score=46.40  Aligned_cols=72  Identities=19%  Similarity=0.241  Sum_probs=46.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH---HHHcCC----ceEE--eCCCh-hHHHHhcCCccEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR---VLAAGA----EQAV--DYSSK-DIELAIKGKFDAVL  242 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~---~~~~g~----~~v~--~~~~~-~~~~~~~~~~dvvi  242 (307)
                      .+.+|||+||+|.+|..+++.+...|.+|+++.++.. ...   +.++..    ..++  |..+. ++.+.+ .++|+||
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~d~Vi   82 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAI-KGCTGVF   82 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHH-TTCSEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHH-cCCCEEE
Confidence            4678999999999999999988889999998766532 211   112211    1122  33332 333333 5689999


Q ss_pred             ECCC
Q 021831          243 DTIG  246 (307)
Q Consensus       243 d~~g  246 (307)
                      .+.+
T Consensus        83 h~A~   86 (337)
T 2c29_D           83 HVAT   86 (337)
T ss_dssp             ECCC
T ss_pred             Eecc
Confidence            9875

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=94.66  E-value=0.058  Score=48.05  Aligned_cols=73  Identities=15%  Similarity=0.143  Sum_probs=48.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCccH-HHHHH-cCCceE-EeCC-ChhHHHHhcCCccEEEECCCC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRVLA-AGAEQA-VDYS-SKDIELAIKGKFDAVLDTIGA  247 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~~~~-~~~~~-~g~~~v-~~~~-~~~~~~~~~~~~dvvid~~g~  247 (307)
                      +.+|||+||+|.+|..+++.+... |.+|+++.+.... ..+.. .+...+ .|.. +.+....+..++|+||.+.+.
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~  101 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVAI  101 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCcc
Confidence            578999999999999999988877 8999999876432 22222 222211 2333 333333222469999998774

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=94.65  E-value=0.051  Score=48.55  Aligned_cols=90  Identities=13%  Similarity=0.131  Sum_probs=58.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC-----C-EEEEEeCCccHHH-HHH----c-C-Cc-eEEeCCChhHHHHhcCCccEE
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASG-----C-HVSATCGSKSIDR-VLA----A-G-AE-QAVDYSSKDIELAIKGKFDAV  241 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G-----~-~Vi~~~~~~~~~~-~~~----~-g-~~-~v~~~~~~~~~~~~~~~~dvv  241 (307)
                      -+|.|+||+|.+|...++++..++     - +++.+.+.++... +..    + + .+ .+.+.+    .+.+ .++|+|
T Consensus        10 ~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~----~~~~-~~~DvV   84 (352)
T 2nqt_A           10 TKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTE----AAVL-GGHDAV   84 (352)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECC----HHHH-TTCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCC----HHHh-cCCCEE
Confidence            479999999999999999988777     4 6766654322110 111    1 1 11 122221    1223 369999


Q ss_pred             EECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          242 LDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       242 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      |.|+|...+...+-.+ +.|-++|+.+.+.
T Consensus        85 f~alg~~~s~~~~~~~-~~G~~vIDlSa~~  113 (352)
T 2nqt_A           85 FLALPHGHSAVLAQQL-SPETLIIDCGADF  113 (352)
T ss_dssp             EECCTTSCCHHHHHHS-CTTSEEEECSSTT
T ss_pred             EECCCCcchHHHHHHH-hCCCEEEEECCCc
Confidence            9999987555655556 7788999988764

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=94.64  E-value=0.029  Score=47.20  Aligned_cols=101  Identities=12%  Similarity=0.148  Sum_probs=65.0

Q ss_pred             HHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc---eEEeCCChhHHHHhcC
Q 021831          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE---QAVDYSSKDIELAIKG  236 (307)
Q Consensus       165 ~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~---~v~~~~~~~~~~~~~~  236 (307)
                      .+.....++++++||-+|.  +.|..+..+++..+.+|+++..+.. .+.    +...+..   .++..+..++. ...+
T Consensus        37 ~l~~l~~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~  113 (257)
T 3f4k_A           37 AVSFINELTDDAKIADIGC--GTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP-FQNE  113 (257)
T ss_dssp             HHTTSCCCCTTCEEEEETC--TTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS-SCTT
T ss_pred             HHHHHhcCCCCCeEEEeCC--CCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC-CCCC
Confidence            3433446788999999993  4689999999988779999965543 232    3344432   22322222111 0115


Q ss_pred             CccEEEECC-----CChhhHHHHHhcccCCcEEEEec
Q 021831          237 KFDAVLDTI-----GAPETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       237 ~~dvvid~~-----g~~~~~~~~~~~l~~~G~~v~~g  268 (307)
                      .||+|+...     .-...+..+.+.|+|||+++...
T Consensus       114 ~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~  150 (257)
T 3f4k_A          114 ELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE  150 (257)
T ss_dssp             CEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             CEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence            799997642     22346788899999999998875

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=94.63  E-value=0.081  Score=45.45  Aligned_cols=94  Identities=12%  Similarity=0.021  Sum_probs=60.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHH-c-----CC----ceEEeCCChhHHHHhcCCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLA-A-----GA----EQAVDYSSKDIELAIKGKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~-~-----g~----~~v~~~~~~~~~~~~~~~~dvv  241 (307)
                      .+.+||++|+  +.|..+..+++..+. +|+++.-+ +-.+.+++ +     +.    -.++..+...+.....+.||+|
T Consensus        75 ~~~~VLdiG~--G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~I  152 (275)
T 1iy9_A           75 NPEHVLVVGG--GDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVI  152 (275)
T ss_dssp             SCCEEEEESC--TTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred             CCCEEEEECC--chHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEE
Confidence            5689999994  457777788877664 88888444 33333332 1     11    2344444344433333579998


Q ss_pred             EECCCC----------hhhHHHHHhcccCCcEEEEecc
Q 021831          242 LDTIGA----------PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       242 id~~g~----------~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      +-....          ...+..+.+.|+++|.++.-..
T Consensus       153 i~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~  190 (275)
T 1iy9_A          153 MVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD  190 (275)
T ss_dssp             EESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred             EECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence            875432          3477889999999999988643

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=94.61  E-value=0.14  Score=47.37  Aligned_cols=92  Identities=17%  Similarity=0.274  Sum_probs=55.8

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHH-H-HHHcCCceEE--eCCCh-hHHHHhcCCccEEEECCCChh
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSID-R-VLAAGAEQAV--DYSSK-DIELAIKGKFDAVLDTIGAPE  249 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~-~-~~~~g~~~v~--~~~~~-~~~~~~~~~~dvvid~~g~~~  249 (307)
                      +.+|+|+| +|.+|..+++.+...|++|++..++.... . +..++....+  +..+. ++.+.+ .++|+||++++...
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l-~~~DvVIn~a~~~~   80 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEV-AKHDLVISLIPYTF   80 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHH-TTSSEEEECCC--C
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHH-cCCcEEEECCcccc
Confidence            56899998 69999999988888899877776654321 1 1222221222  33332 333333 57999999998642


Q ss_pred             hHHHHHhcccCCcEEEEec
Q 021831          250 TERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~g  268 (307)
                      .......+++++-+++...
T Consensus        81 ~~~i~~a~l~~g~~vvd~~   99 (450)
T 1ff9_A           81 HATVIKSAIRQKKHVVTTS   99 (450)
T ss_dssp             HHHHHHHHHHHTCEEEESS
T ss_pred             chHHHHHHHhCCCeEEEee
Confidence            3233445566666666654

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=94.61  E-value=0.32  Score=37.61  Aligned_cols=94  Identities=13%  Similarity=0.050  Sum_probs=59.6

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCccHHHHHHcCCceEEeCCChhHH------HHhc-CCccE
Q 021831          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIE------LAIK-GKFDA  240 (307)
Q Consensus       170 ~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~------~~~~-~~~dv  240 (307)
                      ..++++++||-.|+ |. |..+..+++..  +.+++++..+.... .   ....+...+..+..      .... +.||+
T Consensus        18 ~~~~~~~~vLd~G~-G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~-~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~   91 (180)
T 1ej0_A           18 KLFKPGMTVVDLGA-AP-GGWSQYVVTQIGGKGRIIACDLLPMDP-I---VGVDFLQGDFRDELVMKALLERVGDSKVQV   91 (180)
T ss_dssp             CCCCTTCEEEEESC-TT-CHHHHHHHHHHCTTCEEEEEESSCCCC-C---TTEEEEESCTTSHHHHHHHHHHHTTCCEEE
T ss_pred             CCCCCCCeEEEeCC-CC-CHHHHHHHHHhCCCCeEEEEECccccc-c---CcEEEEEcccccchhhhhhhccCCCCceeE
Confidence            34788999999994 43 88888888886  46898885544211 1   21223333322221      1133 57999


Q ss_pred             EEEC-----CCC------------hhhHHHHHhcccCCcEEEEecc
Q 021831          241 VLDT-----IGA------------PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       241 vid~-----~g~------------~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      |+..     .+.            ...+..+.+.|+++|.++....
T Consensus        92 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  137 (180)
T 1ej0_A           92 VMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF  137 (180)
T ss_dssp             EEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            9983     333            2467788899999999987554

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=94.59  E-value=0.18  Score=45.51  Aligned_cols=76  Identities=20%  Similarity=0.268  Sum_probs=48.9

Q ss_pred             CCCCCEEEEEcCCchHHHHH-HHHHHHcCCEEEEEeCCcc-----------------HHHHHHcCCce-EEeCC--Chh-
Q 021831          172 MSEGQRLLVLGGGGAVGFAA-VQFSVASGCHVSATCGSKS-----------------IDRVLAAGAEQ-AVDYS--SKD-  229 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~-~~~a~~~G~~Vi~~~~~~~-----------------~~~~~~~g~~~-v~~~~--~~~-  229 (307)
                      ...+.++||+|+++++|++. +.+|...|+.++.+...+.                 .+.+++.|... .++-+  +++ 
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence            35678999999999999985 5566677998888754321                 12345566543 33333  222 


Q ss_pred             ---HHHHhc---CCccEEEECCCC
Q 021831          230 ---IELAIK---GKFDAVLDTIGA  247 (307)
Q Consensus       230 ---~~~~~~---~~~dvvid~~g~  247 (307)
                         ..+.+.   +++|+++.+.+.
T Consensus       127 i~~vi~~i~~~~G~IDiLVhS~A~  150 (401)
T 4ggo_A          127 KAQVIEEAKKKGIKFDLIVYSLAS  150 (401)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             HHHHHHHHHHhcCCCCEEEEeccc
Confidence               222222   689999999874

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=94.59  E-value=0.12  Score=48.05  Aligned_cols=39  Identities=18%  Similarity=0.140  Sum_probs=33.2

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHc---CCEEEEEeCCcc
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVAS---GCHVSATCGSKS  210 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~---G~~Vi~~~~~~~  210 (307)
                      ...+.+|||+||+|.+|..+++.+...   |.+|+++.++..
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~  111 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAES  111 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCC
Confidence            346889999999999999988877777   899999988654

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=94.59  E-value=0.023  Score=47.12  Aligned_cols=96  Identities=15%  Similarity=0.126  Sum_probs=63.4

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCC-ceEEeCCChhHHHHh-cCCccEEEECCCCh
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGA-EQAVDYSSKDIELAI-KGKFDAVLDTIGAP  248 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~-~~v~~~~~~~~~~~~-~~~~dvvid~~g~~  248 (307)
                      ++++.+||-+|.  +.|..+..+++. |++|+++..+.. .+.+++... ..++..+..+..... .+.||+|+....-.
T Consensus        46 ~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~~~  122 (226)
T 3m33_A           46 LTPQTRVLEAGC--GHGPDAARFGPQ-AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRRGPT  122 (226)
T ss_dssp             CCTTCEEEEESC--TTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEESCCS
T ss_pred             CCCCCeEEEeCC--CCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCCCHH
Confidence            467899999984  457777777776 889999966544 444544322 233333221111111 25799999886656


Q ss_pred             hhHHHHHhcccCCcEEEEeccC
Q 021831          249 ETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       249 ~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ..+..+.+.|+|||+++..+..
T Consensus       123 ~~l~~~~~~LkpgG~l~~~~~~  144 (226)
T 3m33_A          123 SVILRLPELAAPDAHFLYVGPR  144 (226)
T ss_dssp             GGGGGHHHHEEEEEEEEEEESS
T ss_pred             HHHHHHHHHcCCCcEEEEeCCc
Confidence            6788999999999999966543

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=94.59  E-value=0.083  Score=42.89  Aligned_cols=92  Identities=14%  Similarity=0.105  Sum_probs=56.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCccHHHHHHcCCceEEeCCChhHHHH--hcC-CccEEEECCCCh
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA--IKG-KFDAVLDTIGAP  248 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~--~~~-~~dvvid~~g~~  248 (307)
                      .+.+|||+||+|.+|...++.+...|.  +|+++.++...    . .. .+ ..-..|+.+.  +.. -+|+||++.|..
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----~-~~-~~-~~~~~D~~~~~~~~~~~~d~vi~~a~~~   76 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----E-HP-RL-DNPVGPLAELLPQLDGSIDTAFCCLGTT   76 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----C-CT-TE-ECCBSCHHHHGGGCCSCCSEEEECCCCC
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----c-CC-Cc-eEEeccccCHHHHHHhhhcEEEECeeec
Confidence            357899999999999999999999998  99988776543    0 11 11 1111122221  211 179999998853


Q ss_pred             h---------------hHHHHHhcccC--CcEEEEeccCcc
Q 021831          249 E---------------TERLGLNFLKR--GGHYMTLHGETA  272 (307)
Q Consensus       249 ~---------------~~~~~~~~l~~--~G~~v~~g~~~~  272 (307)
                      .               ....+++.+.+  .+++|.++....
T Consensus        77 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~  117 (215)
T 2a35_A           77 IKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGA  117 (215)
T ss_dssp             HHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             cccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCccc
Confidence            1               11233333333  357888887543

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=94.58  E-value=0.1  Score=46.51  Aligned_cols=31  Identities=16%  Similarity=0.174  Sum_probs=28.1

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC-EEEEEeC
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGC-HVSATCG  207 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~  207 (307)
                      +|||+||+|.+|..+++.+...|. +|+...+
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~   33 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHR   33 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECC
Confidence            699999999999999999888898 8888866

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=94.58  E-value=0.059  Score=46.14  Aligned_cols=98  Identities=14%  Similarity=0.145  Sum_probs=64.2

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCc-cHHHHH----Hc-CCc--eEEeCCChhHHHHhc-C
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSK-SIDRVL----AA-GAE--QAVDYSSKDIELAIK-G  236 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~-~~~~~~----~~-g~~--~v~~~~~~~~~~~~~-~  236 (307)
                      ....++++++||-.|+  +.|..+..+++..  +.+|+++..+. ..+.++    .. |.+  .+...+   +.+... +
T Consensus       104 ~~~~~~~~~~VLD~G~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d---~~~~~~~~  178 (275)
T 1yb2_A          104 MRCGLRPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSD---IADFISDQ  178 (275)
T ss_dssp             --CCCCTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSC---TTTCCCSC
T ss_pred             HHcCCCCcCEEEEecC--CCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECc---hhccCcCC
Confidence            3567889999999984  3688888888873  56999986544 333332    33 432  222222   111222 4


Q ss_pred             CccEEEECCCCh-hhHHHHHhcccCCcEEEEeccC
Q 021831          237 KFDAVLDTIGAP-ETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       237 ~~dvvid~~g~~-~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      .||+|+...... ..+..+.+.|+++|+++.....
T Consensus       179 ~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  213 (275)
T 1yb2_A          179 MYDAVIADIPDPWNHVQKIASMMKPGSVATFYLPN  213 (275)
T ss_dssp             CEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEESS
T ss_pred             CccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            699999876654 4778899999999999887643

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=94.56  E-value=0.072  Score=47.70  Aligned_cols=97  Identities=18%  Similarity=0.117  Sum_probs=60.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCccH--HHHHHcCCceEE--eCCChhHHHHhcCCccEEEECCCCh
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI--DRVLAAGAEQAV--DYSSKDIELAIKGKFDAVLDTIGAP  248 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~~~~--~~~~~~g~~~v~--~~~~~~~~~~~~~~~dvvid~~g~~  248 (307)
                      .+.+|||+||+|.+|..+++.+...| .+|+++.+....  ..+.......++  |..+.+..+.+..++|+||.+++..
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~~  110 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATYH  110 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCCCS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCCcc
Confidence            35789999999999999999998899 899998765332  111101111222  2333332233335799999998853


Q ss_pred             h-----------------hHHHHHhcccCC---cEEEEeccC
Q 021831          249 E-----------------TERLGLNFLKRG---GHYMTLHGE  270 (307)
Q Consensus       249 ~-----------------~~~~~~~~l~~~---G~~v~~g~~  270 (307)
                      .                 ....+++.++..   +++|.++..
T Consensus       111 ~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~  152 (377)
T 2q1s_A          111 GNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAG  152 (377)
T ss_dssp             CHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC
T ss_pred             CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCH
Confidence            1                 122344444443   588888764

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=94.55  E-value=0.085  Score=45.30  Aligned_cols=84  Identities=13%  Similarity=0.186  Sum_probs=54.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCCh-hHHHHhcC-CccEEEECCCChh-----
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK-DIELAIKG-KFDAVLDTIGAPE-----  249 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~-~~dvvid~~g~~~-----  249 (307)
                      +|||+||+|.+|...++.+. .|.+|+++.+...         ....|..+. ++.+.+.+ ++|+||.+.+...     
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~---------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~   71 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK---------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAE   71 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS---------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHT
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc---------cccccCCCHHHHHHHHHhcCCCEEEECcccCCHhhhh
Confidence            69999999999999988888 7999999877652         011233333 33333433 5899999987421     


Q ss_pred             ------------hHHHHHhcccC-CcEEEEeccC
Q 021831          250 ------------TERLGLNFLKR-GGHYMTLHGE  270 (307)
Q Consensus       250 ------------~~~~~~~~l~~-~G~~v~~g~~  270 (307)
                                  ....+++.++. +.++|.++..
T Consensus        72 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~  105 (299)
T 1n2s_A           72 SEPELAQLLNATSVEAIAKAANETGAWVVHYSTD  105 (299)
T ss_dssp             TCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEG
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence                        12334444443 4588888754

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=94.53  E-value=0.062  Score=47.04  Aligned_cols=73  Identities=18%  Similarity=0.199  Sum_probs=46.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCc---cHHHHHHc--C-CceEE--eCCChhHHHHhcCCccEEEEC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSK---SIDRVLAA--G-AEQAV--DYSSKDIELAIKGKFDAVLDT  244 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G--~~Vi~~~~~~---~~~~~~~~--g-~~~v~--~~~~~~~~~~~~~~~dvvid~  244 (307)
                      +.+|||+||+|.+|..+++.+...|  .+|+++.+..   +.+.+.++  + ...++  |..+.+..+.+.+++|+||.+
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   82 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHL   82 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEEC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEEC
Confidence            4579999999999999988887776  7999887642   22222222  1 11222  333333222222579999999


Q ss_pred             CCC
Q 021831          245 IGA  247 (307)
Q Consensus       245 ~g~  247 (307)
                      .+.
T Consensus        83 A~~   85 (336)
T 2hun_A           83 AAE   85 (336)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            885

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=94.52  E-value=0.16  Score=43.41  Aligned_cols=87  Identities=22%  Similarity=0.221  Sum_probs=58.1

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChh----
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE----  249 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~----  249 (307)
                      +.+++|+|+ |+.|.+++..+...|.+|+...|+.+ .+.+.+++.. +..+.+.       ..+|+||+|++...    
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~-~~~~~~l-------~~~DiVInaTp~Gm~~~~  188 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCD-CFMEPPK-------SAFDLIINATSASLHNEL  188 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCE-EESSCCS-------SCCSEEEECCTTCCCCSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCe-EecHHHh-------ccCCEEEEcccCCCCCCC
Confidence            889999996 99999999999999988888777644 2332266643 3333221       16999999987431    


Q ss_pred             --hHHHHHhcccCCcEEEEeccC
Q 021831          250 --TERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       250 --~~~~~~~~l~~~G~~v~~g~~  270 (307)
                        ....+...++++..++++...
T Consensus       189 ~l~~~~l~~~l~~~~~v~D~vY~  211 (269)
T 3phh_A          189 PLNKEVLKGYFKEGKLAYDLAYG  211 (269)
T ss_dssp             SSCHHHHHHHHHHCSEEEESCCS
T ss_pred             CCChHHHHhhCCCCCEEEEeCCC
Confidence              112222357788888887654

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=94.50  E-value=0.19  Score=44.63  Aligned_cols=87  Identities=17%  Similarity=0.164  Sum_probs=60.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChh---
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE---  249 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~---  249 (307)
                      .|.+|.|+| .|.+|..+++.++.+|++|++..+.. ..+...  +...+     .++.+.+ ...|+|+-+++...   
T Consensus       172 ~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--g~~~~-----~~l~ell-~~sDvV~l~~Plt~~T~  242 (345)
T 4g2n_A          172 TGRRLGIFG-MGRIGRAIATRARGFGLAIHYHNRTRLSHALEE--GAIYH-----DTLDSLL-GASDIFLIAAPGRPELK  242 (345)
T ss_dssp             TTCEEEEES-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT--TCEEC-----SSHHHHH-HTCSEEEECSCCCGGGT
T ss_pred             CCCEEEEEE-eChhHHHHHHHHHHCCCEEEEECCCCcchhhhc--CCeEe-----CCHHHHH-hhCCEEEEecCCCHHHH
Confidence            378999999 69999999999999999999987654 222222  43221     2333333 34899999887431   


Q ss_pred             -hH-HHHHhcccCCcEEEEecc
Q 021831          250 -TE-RLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       250 -~~-~~~~~~l~~~G~~v~~g~  269 (307)
                       .+ ...+..|+++..+|.++-
T Consensus       243 ~li~~~~l~~mk~gailIN~aR  264 (345)
T 4g2n_A          243 GFLDHDRIAKIPEGAVVINISR  264 (345)
T ss_dssp             TCBCHHHHHHSCTTEEEEECSC
T ss_pred             HHhCHHHHhhCCCCcEEEECCC
Confidence             11 456778899999988874

>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}

Probab=94.48  E-value=0.094  Score=42.80  Aligned_cols=96  Identities=21%  Similarity=0.207  Sum_probs=62.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCceEEeCCChhHHHHh--cC-CccEEEECCC
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAI--KG-KFDAVLDTIG  246 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~--~~-~~dvvid~~g  246 (307)
                      ...++.+||=+|.  +.|..+..+++. |++++++.-+.. .+.+++.+...+...+..++....  .+ .||+|+....
T Consensus        49 ~~~~~~~vLdiG~--G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~  125 (227)
T 3e8s_A           49 LGRQPERVLDLGC--GEGWLLRALADR-GIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFA  125 (227)
T ss_dssp             HHTCCSEEEEETC--TTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESC
T ss_pred             hcCCCCEEEEeCC--CCCHHHHHHHHC-CCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECch
Confidence            3356799999984  457777777766 889999965543 455666544444443322321111  13 5999987533


Q ss_pred             C-----hhhHHHHHhcccCCcEEEEecc
Q 021831          247 A-----PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       247 ~-----~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      -     ...+..+.+.|+|||+++....
T Consensus       126 l~~~~~~~~l~~~~~~L~pgG~l~~~~~  153 (227)
T 3e8s_A          126 LLHQDIIELLSAMRTLLVPGGALVIQTL  153 (227)
T ss_dssp             CCSSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             hhhhhHHHHHHHHHHHhCCCeEEEEEec
Confidence            1     2477888999999999988654

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=94.47  E-value=0.12  Score=45.94  Aligned_cols=90  Identities=18%  Similarity=0.124  Sum_probs=61.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHH-HcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhh-
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSV-ASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET-  250 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~-~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~-  250 (307)
                      .|.+|.|+| .|.+|...++.++ ..|++|++..++. ..+...+.|...+   .  ++.+.+ ...|+|+.++..... 
T Consensus       162 ~g~~vgIIG-~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~---~--~l~ell-~~aDvVil~vp~~~~t  234 (348)
T 2w2k_A          162 RGHVLGAVG-LGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERV---D--SLEELA-RRSDCVSVSVPYMKLT  234 (348)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEEC---S--SHHHHH-HHCSEEEECCCCSGGG
T ss_pred             CCCEEEEEE-ECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEe---C--CHHHHh-ccCCEEEEeCCCChHH
Confidence            578999999 5999999999999 9999999886654 4444555565422   1  222222 237999998875321 


Q ss_pred             ---H-HHHHhcccCCcEEEEeccC
Q 021831          251 ---E-RLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       251 ---~-~~~~~~l~~~G~~v~~g~~  270 (307)
                         + ...+..|+++..++.++..
T Consensus       235 ~~li~~~~l~~mk~gailin~srg  258 (348)
T 2w2k_A          235 HHLIDEAFFAAMKPGSRIVNTARG  258 (348)
T ss_dssp             TTCBCHHHHHHSCTTEEEEECSCG
T ss_pred             HHHhhHHHHhcCCCCCEEEECCCC
Confidence               1 2455678888888877654

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=94.45  E-value=0.11  Score=45.52  Aligned_cols=71  Identities=23%  Similarity=0.332  Sum_probs=46.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc----HHHHHHc---CCceEE--eCCCh-hHHHHhcCCccEEEEC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS----IDRVLAA---GAEQAV--DYSSK-DIELAIKGKFDAVLDT  244 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~----~~~~~~~---g~~~v~--~~~~~-~~~~~~~~~~dvvid~  244 (307)
                      +.+|||+||+|.+|..+++.+...|.+|+++.++..    ...+..+   ....++  |..+. ++.+.+ .++|+||.+
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~D~Vih~   87 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPI-AGCDFVFHV   87 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHH-TTCSEEEEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHH-cCCCEEEEe
Confidence            678999999999999999999889999988765432    1112222   111223  33332 333333 468999997


Q ss_pred             CC
Q 021831          245 IG  246 (307)
Q Consensus       245 ~g  246 (307)
                      ++
T Consensus        88 A~   89 (338)
T 2rh8_A           88 AT   89 (338)
T ss_dssp             SS
T ss_pred             CC
Confidence            65

>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}

Probab=94.45  E-value=0.12  Score=42.91  Aligned_cols=97  Identities=19%  Similarity=0.243  Sum_probs=61.8

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCcc-HHH----HHHcCCc---eEEeCCChhHHH-HhcCCc
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKS-IDR----VLAAGAE---QAVDYSSKDIEL-AIKGKF  238 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~~~-~~~----~~~~g~~---~v~~~~~~~~~~-~~~~~~  238 (307)
                      .....++.+||=+|  .+.|..+..+++.. +.+|+++..+.+ .+.    ++..+..   .++..+..+... ...+.|
T Consensus        66 ~~~~~~~~~vLDiG--~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~f  143 (232)
T 3ntv_A           66 LIRMNNVKNILEIG--TAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVY  143 (232)
T ss_dssp             HHHHHTCCEEEEEC--CSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCE
T ss_pred             HHhhcCCCEEEEEe--CchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCc
Confidence            34445788999998  45677888888754 569999865443 333    3445532   344444334333 334689


Q ss_pred             cEEEECCCC---hhhHHHHHhcccCCcEEEEe
Q 021831          239 DAVLDTIGA---PETERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       239 dvvid~~g~---~~~~~~~~~~l~~~G~~v~~  267 (307)
                      |+||-....   ...+..+.+.|+|||.++.-
T Consensus       144 D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d  175 (232)
T 3ntv_A          144 DMIFIDAAKAQSKKFFEIYTPLLKHQGLVITD  175 (232)
T ss_dssp             EEEEEETTSSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred             cEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            988754432   23567788999999999883

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=94.42  E-value=0.11  Score=42.93  Aligned_cols=97  Identities=22%  Similarity=0.255  Sum_probs=61.4

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCcc-HHHHHHcCC--c--eEEeCCChhHH--HHhcCCccE
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKS-IDRVLAAGA--E--QAVDYSSKDIE--LAIKGKFDA  240 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~~~-~~~~~~~g~--~--~v~~~~~~~~~--~~~~~~~dv  240 (307)
                      ...++++++||-.|+ | .|..+..+++..| .+|+++..+.+ .+.+++.-.  .  ..+..+..+..  ....+.||+
T Consensus        69 ~~~~~~~~~VLDlGc-G-~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~  146 (230)
T 1fbn_A           69 VMPIKRDSKILYLGA-S-AGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDV  146 (230)
T ss_dssp             CCCCCTTCEEEEESC-C-SSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEE
T ss_pred             ccCCCCCCEEEEEcc-c-CCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEE
Confidence            345678999999994 4 3888888998876 58999965543 333332211  1  12222222111  011257999


Q ss_pred             EEECCCCh---h-hHHHHHhcccCCcEEEEe
Q 021831          241 VLDTIGAP---E-TERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       241 vid~~g~~---~-~~~~~~~~l~~~G~~v~~  267 (307)
                      |+......   . .+..+.+.|+|+|+++..
T Consensus       147 v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          147 IYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             EEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            99766554   2 378888899999999886

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=94.42  E-value=0.31  Score=48.32  Aligned_cols=76  Identities=22%  Similarity=0.354  Sum_probs=50.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHH-HcCCE-EEEEeCCc----cH----HHHHHcCCceE---EeCCCh-hHHHHhc--
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSV-ASGCH-VSATCGSK----SI----DRVLAAGAEQA---VDYSSK-DIELAIK--  235 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~-~~G~~-Vi~~~~~~----~~----~~~~~~g~~~v---~~~~~~-~~~~~~~--  235 (307)
                      +.++.++||.|++|++|++.++.+. ..|++ |+.+.++.    +.    +.+++.|....   .|.++. +..+.+.  
T Consensus       527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~  606 (795)
T 3slk_A          527 WDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASI  606 (795)
T ss_dssp             CCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             cccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            4678999999999999999888776 79994 77776652    11    22345565422   234443 2333222  


Q ss_pred             ---CCccEEEECCCC
Q 021831          236 ---GKFDAVLDTIGA  247 (307)
Q Consensus       236 ---~~~dvvid~~g~  247 (307)
                         ...|++|++.|.
T Consensus       607 ~~~~~id~lVnnAGv  621 (795)
T 3slk_A          607 PDEHPLTAVVHAAGV  621 (795)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             HHhCCCEEEEECCCc
Confidence               268999999884

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=94.41  E-value=0.13  Score=44.17  Aligned_cols=92  Identities=18%  Similarity=0.160  Sum_probs=59.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCccH--HHHHHcCC--ceEEeCCChhHHHHhcCCccEEEECCCCh
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGA--EQAVDYSSKDIELAIKGKFDAVLDTIGAP  248 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~~--~~~~~~g~--~~v~~~~~~~~~~~~~~~~dvvid~~g~~  248 (307)
                      .+.+++|+|+ |+.|.+++..+...|+ +|+...++.+.  +.+++++.  ..+..+.  ++..   ..+|+||++++..
T Consensus       119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~--~l~~---~~~DivInaTp~g  192 (272)
T 3pwz_A          119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYE--ALEG---QSFDIVVNATSAS  192 (272)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG--GGTT---CCCSEEEECSSGG
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH--Hhcc---cCCCEEEECCCCC
Confidence            5889999996 8999999998889997 88777776442  23455543  2233222  2111   5699999998754


Q ss_pred             hhH---HHHHhcccCCcEEEEeccCc
Q 021831          249 ETE---RLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       249 ~~~---~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ..-   ..-...++++..++++-..+
T Consensus       193 m~~~~~~i~~~~l~~~~~V~DlvY~P  218 (272)
T 3pwz_A          193 LTADLPPLPADVLGEAALAYELAYGK  218 (272)
T ss_dssp             GGTCCCCCCGGGGTTCSEEEESSCSC
T ss_pred             CCCCCCCCCHHHhCcCCEEEEeecCC
Confidence            110   01234677888888876543

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=94.39  E-value=0.056  Score=46.99  Aligned_cols=61  Identities=16%  Similarity=0.137  Sum_probs=43.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCCh-hHHHHhcC-CccEEEECCCC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK-DIELAIKG-KFDAVLDTIGA  247 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~-~~dvvid~~g~  247 (307)
                      +.+|||+||+|.+|..+++.+...|.+|+++.+...            .|..+. ++.+.+.. ++|+||.+.+.
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~------------~D~~d~~~~~~~~~~~~~d~vih~a~~   65 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE------------LNLLDSRAVHDFFASERIDQVYLAAAK   65 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT------------CCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCcc------------CCccCHHHHHHHHHhcCCCEEEEcCee
Confidence            468999999999999999998888998888765421            133332 23333322 68999998874

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=94.37  E-value=0.14  Score=45.94  Aligned_cols=34  Identities=26%  Similarity=0.305  Sum_probs=29.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHH-HcCCEEEEEeCC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSV-ASGCHVSATCGS  208 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~-~~G~~Vi~~~~~  208 (307)
                      +.+|||+||+|.+|..+++.+. ..|.+|+++.+.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~   36 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSL   36 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecC
Confidence            3589999999999999998888 899999998764

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=94.33  E-value=0.029  Score=49.45  Aligned_cols=71  Identities=17%  Similarity=0.186  Sum_probs=45.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--HHHHHHc-C--CceEEeCCChhHHHHhcCCccEEEECCCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDRVLAA-G--AEQAVDYSSKDIELAIKGKFDAVLDTIGA  247 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--~~~~~~~-g--~~~v~~~~~~~~~~~~~~~~dvvid~~g~  247 (307)
                      .+.+|||+||+|.+|..+++.+...|.+|+++.+...  ...+..+ +  .-.++..+.   .+....++|+||.+++.
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~d~vih~A~~  101 (343)
T 2b69_A           26 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV---VEPLYIEVDQIYHLASP  101 (343)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCT---TSCCCCCCSEEEECCSC
T ss_pred             CCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCcc---CChhhcCCCEEEECccc
Confidence            4678999999999999999998888999999876422  1111111 1  112232221   11112579999999874

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=94.32  E-value=0.14  Score=42.46  Aligned_cols=94  Identities=13%  Similarity=0.005  Sum_probs=60.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCceEEeCCChhHHHHhc-CCccEEEECC---
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTI---  245 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~-~~~dvvid~~---  245 (307)
                      .++++.+||=+|.  +.|..+..+++. |++|+++.-+.. .+.+++.  ..++..+..++..... +.||+|+...   
T Consensus        38 ~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~  112 (240)
T 3dli_A           38 YFKGCRRVLDIGC--GRGEFLELCKEE-GIESIGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDGVMISHFVE  112 (240)
T ss_dssp             GTTTCSCEEEETC--TTTHHHHHHHHH-TCCEEEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCBSEEEEESCGG
T ss_pred             hhcCCCeEEEEeC--CCCHHHHHHHhC-CCcEEEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCeeEEEECCchh
Confidence            4678899999984  467777666665 889988865543 3445444  2333333233322223 5799998743   


Q ss_pred             --CC---hhhHHHHHhcccCCcEEEEecc
Q 021831          246 --GA---PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       246 --g~---~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                        ..   ...+..+.+.|+|||.++....
T Consensus       113 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  141 (240)
T 3dli_A          113 HLDPERLFELLSLCYSKMKYSSYIVIESP  141 (240)
T ss_dssp             GSCGGGHHHHHHHHHHHBCTTCCEEEEEE
T ss_pred             hCCcHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence              22   2467788899999999987543

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=94.30  E-value=0.26  Score=43.44  Aligned_cols=89  Identities=18%  Similarity=0.235  Sum_probs=61.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHH-H-cCCEEEEEeCCcc--H-HHHHHcCCceEEeCCChhHHHHhc-CCccEEEECCCChh
Q 021831          176 QRLLVLGGGGAVGFAAVQFSV-A-SGCHVSATCGSKS--I-DRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPE  249 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~-~-~G~~Vi~~~~~~~--~-~~~~~~g~~~v~~~~~~~~~~~~~-~~~dvvid~~g~~~  249 (307)
                      -+|.|+|. |.+|...++.++ . .+++++++++...  . ..++++|...+++    ++.+.+. ..+|+|+.|++...
T Consensus         9 ~~v~iiG~-G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~----~~~~~l~~~~~D~V~i~tp~~~   83 (346)
T 3cea_A            9 LRAAIIGL-GRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT----NYKDMIDTENIDAIFIVAPTPF   83 (346)
T ss_dssp             EEEEEECC-STTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES----CHHHHHTTSCCSEEEECSCGGG
T ss_pred             ceEEEEcC-CHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC----CHHHHhcCCCCCEEEEeCChHh
Confidence            47999995 999998877776 4 3678777754432  2 2345667654442    3455554 37999999999887


Q ss_pred             hHHHHHhcccCCcEEEEeccC
Q 021831          250 TERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ....+..+++.| +-|++..|
T Consensus        84 h~~~~~~al~~G-~~v~~eKp  103 (346)
T 3cea_A           84 HPEMTIYAMNAG-LNVFCEKP  103 (346)
T ss_dssp             HHHHHHHHHHTT-CEEEECSC
T ss_pred             HHHHHHHHHHCC-CEEEEcCC
Confidence            778888888875 55556655

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=94.29  E-value=0.053  Score=50.97  Aligned_cols=65  Identities=17%  Similarity=0.140  Sum_probs=45.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGA  247 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~  247 (307)
                      +.+|||+||+|.+|..+++.+...|.+|+++.++....     . ....+..+ .+.+ ...++|+||++.+.
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~-----~-~v~~d~~~-~~~~-~l~~~D~Vih~A~~  211 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP-----G-KRFWDPLN-PASD-LLDGADVLVHLAGE  211 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT-----T-CEECCTTS-CCTT-TTTTCSEEEECCCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc-----c-ceeecccc-hhHH-hcCCCCEEEECCCC
Confidence            67999999999999999999999999999998765421     0 11112111 1111 12579999999874

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=94.28  E-value=0.096  Score=45.66  Aligned_cols=71  Identities=21%  Similarity=0.252  Sum_probs=46.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcC-CceEE--eCCChh-HHHHhc-CCccEEEECCCC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAG-AEQAV--DYSSKD-IELAIK-GKFDAVLDTIGA  247 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g-~~~v~--~~~~~~-~~~~~~-~~~dvvid~~g~  247 (307)
                      .+|||+||+|.+|..+++.+...|.+|+++.+...... +.+. ...++  |..+.+ +.+.+. .++|+||.+.+.
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~   77 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE-DAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAAD   77 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG-GGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch-hhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcc
Confidence            47999999999999999999889999999876432110 1111 11223  333332 333333 379999999874

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=94.26  E-value=0.2  Score=44.27  Aligned_cols=88  Identities=11%  Similarity=0.065  Sum_probs=60.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChh---
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE---  249 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~---  249 (307)
                      .|.+|.|+| .|.+|...++.++..|.+|++..+.. +.+.+.+.|....      ++.+.+ ...|+|+.+++...   
T Consensus       154 ~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~------~l~e~l-~~aDvVi~~vp~~~~t~  225 (330)
T 2gcg_A          154 TQSTVGIIG-LGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV------STPELA-AQSDFIVVACSLTPATE  225 (330)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC------CHHHHH-HHCSEEEECCCCCTTTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC------CHHHHH-hhCCEEEEeCCCChHHH
Confidence            477999999 59999999999999999998887543 4444555554321      222222 23799998887531   


Q ss_pred             -hH-HHHHhcccCCcEEEEecc
Q 021831          250 -TE-RLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       250 -~~-~~~~~~l~~~G~~v~~g~  269 (307)
                       .+ ...+..|+++..+|.++.
T Consensus       226 ~~i~~~~~~~mk~gailIn~sr  247 (330)
T 2gcg_A          226 GLCNKDFFQKMKETAVFINISR  247 (330)
T ss_dssp             TCBSHHHHHHSCTTCEEEECSC
T ss_pred             HhhCHHHHhcCCCCcEEEECCC
Confidence             12 345667888888877764

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=94.24  E-value=0.061  Score=47.26  Aligned_cols=73  Identities=18%  Similarity=0.219  Sum_probs=47.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcC-------CEEEEEeCCccHHHHHHcCC-ceEE--eCCCh-hHHHHhcCCccEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASG-------CHVSATCGSKSIDRVLAAGA-EQAV--DYSSK-DIELAIKGKFDAVL  242 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G-------~~Vi~~~~~~~~~~~~~~g~-~~v~--~~~~~-~~~~~~~~~~dvvi  242 (307)
                      .+.+|||+||+|.+|..+++.+...|       .+|+++.+....... ..+. ...+  |..+. .+.+.+.+++|+||
T Consensus        13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vi   91 (342)
T 2hrz_A           13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-GFSGAVDARAADLSAPGEAEKLVEARPDVIF   91 (342)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-TCCSEEEEEECCTTSTTHHHHHHHTCCSEEE
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-ccCCceeEEEcCCCCHHHHHHHHhcCCCEEE
Confidence            46789999999999999999888889       788888765421100 0111 1122  33333 33333435799999


Q ss_pred             ECCCC
Q 021831          243 DTIGA  247 (307)
Q Consensus       243 d~~g~  247 (307)
                      .+.+.
T Consensus        92 h~A~~   96 (342)
T 2hrz_A           92 HLAAI   96 (342)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            99885

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=94.18  E-value=0.13  Score=45.49  Aligned_cols=73  Identities=18%  Similarity=0.194  Sum_probs=48.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-H-HHHHHc--C-CceEE--eCCCh-hHHHHhcC-CccEEEECC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-I-DRVLAA--G-AEQAV--DYSSK-DIELAIKG-KFDAVLDTI  245 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~-~~~~~~--g-~~~v~--~~~~~-~~~~~~~~-~~dvvid~~  245 (307)
                      +.+|||+||+|.+|..+++.+...|.+|+++.+... . .....+  + ...++  |..+. .+.+.+.+ ++|+||.+.
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   88 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA   88 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEECC
Confidence            578999999999999999999889999999876542 1 122221  1 11233  33333 23333333 589999999


Q ss_pred             CC
Q 021831          246 GA  247 (307)
Q Consensus       246 g~  247 (307)
                      +.
T Consensus        89 ~~   90 (357)
T 1rkx_A           89 AQ   90 (357)
T ss_dssp             SC
T ss_pred             CC
Confidence            83

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	307
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	1e-21
d1yb5a1	150	b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas	2e-20
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	7e-20
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	1e-19
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	3e-18
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	6e-18
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	2e-17
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	2e-16
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	2e-15
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	2e-15
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	3e-15
d1qora1	147	b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas	3e-15
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	3e-15
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	2e-13
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	8e-13
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	3e-12
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	3e-11
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	7e-11
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	1e-10
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	1e-10
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	1e-10
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	2e-10
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	2e-10
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	3e-10
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	7e-10
d1v3va2	182	c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd	1e-09
d1xa0a2	176	c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba	5e-09
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	7e-09
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	1e-08
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	2e-08
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	4e-08
d1o8ca2	77	c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc	4e-08
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	7e-08
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	9e-08
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	2e-07
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	3e-07
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	4e-07
d1vj1a2	187	c.2.1.1 (A:125-311) Putative zinc-binding alcohol	5e-07
d1tt7a2	167	c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac	1e-06
d1vj1a1	166	b.35.1.2 (A:-1-124,A:312-351) Putative zinc-bindin	3e-05
d1o89a2	177	c.2.1.1 (A:116-292) Hypothetical protein YhdH {Esc	3e-05
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	5e-05
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	5e-05
d1v3va1	147	b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hyd	6e-05
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	7e-05
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	9e-05
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	2e-04
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	2e-04
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	4e-04
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	5e-04
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	5e-04
d1iz0a2	171	c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus	5e-04
d1rjwa2	168	c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu	0.002

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 86.9 bits (214), Expect = 1e-21
 Identities = 32/158 (20%), Positives = 54/158 (34%), Gaps = 9/158 (5%)

Query: 27  TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEP 86
           ++ +A V+ +        V+  + + DL   +VLVR    S+N  D            + 
Sbjct: 2   SAFQAFVVNKTETEFTAGVQ-TISMDDLPEGDVLVRVHYSSVNYKDGLAS----IPDGKI 56

Query: 87  LLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAV--RGTYADYAVLSEDELTPKP 144
           +        I      V +       G EV    +   V   G Y++YA L  + L P P
Sbjct: 57  VKTYPFVPGIDLAGVVVSSQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLP 116

Query: 145 VSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLG 182
             +    A  I  A L           +  G+ ++ L 
Sbjct: 117 KGLER-IAQEISLAELPQALKRILRGELR-GRTVVRLA 152

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.0 bits (206), Expect = 2e-20
 Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 5/152 (3%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           RAV +  FGGPEVL++R ++ VP  K ++VL++  A  +NP++T +RSG      +PLLP
Sbjct: 4   RAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGT--YSRKPLLP 61

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTH 149
              G D++G + AVG +  +   G  VF     + + G YA+YA+ ++  +   P  +  
Sbjct: 62  YTPGSDVAGVIEAVGDNASAFKKGDRVF---TSSTISGGYAEYALAADHTVYKLPEKLKP 118

Query: 150 ADASAIPFAALTAWRALKCAARMSEGQRLLVL 181
              S  P   +            + G+ +L+L
Sbjct: 119 VIGSQYPLEKVAEAHENIIHGSGATGKMILLL 150

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 82.6 bits (203), Expect = 7e-20
 Identities = 31/162 (19%), Positives = 56/162 (34%), Gaps = 4/162 (2%)

Query: 26  TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFE 85
           +T  +A+   +      + V+  +   DL  + VL++     IN  D       G  + E
Sbjct: 1   STLFQALQAEKNADDVSVHVK-TISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVRE 59

Query: 86  PLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPV 145
              PLILG D +G V +      +              +  G  ++YA +  D L P P 
Sbjct: 60  Y--PLILGIDAAGTVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQ 117

Query: 146 SVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV 187
           +++  +A       +               + +L     G V
Sbjct: 118 NLSLKEAMVDQLLTIVDREVSL-EETPGALKDILQNRIQGRV 158

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 81.5 bits (200), Expect = 1e-19
 Identities = 27/137 (19%), Positives = 45/137 (32%), Gaps = 3/137 (2%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A++L +  G  +  V+  ++   L   +V V     S+N  D    +G G+ I     P
Sbjct: 2   QALLLEQQDGKTLASVQ-TLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNF--P 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTH 149
           +I G D +G V               + G        G  A+ A +  D L   P     
Sbjct: 59  MIPGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGQAA 118

Query: 150 ADASAIPFAALTAWRAL 166
            + S             
Sbjct: 119 KEISLSEAPNFAEAIIN 135

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 78.5 bits (192), Expect = 3e-18
 Identities = 36/177 (20%), Positives = 55/177 (31%), Gaps = 29/177 (16%)

Query: 31  AVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPL 90
           + VL        L +     +P+ K +EVL++   V I   D         + F    P+
Sbjct: 4   SAVLY---KQNDLRLE-QRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPM 59

Query: 91  ILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR------------------------ 126
           ++G + SG V  VG +V+ L  G  V         R                        
Sbjct: 60  VIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDD 119

Query: 127 GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGG 183
           G  A Y V + D     P +          F       A + AAR      + V+  
Sbjct: 120 GNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAFE-AARKKADNTIKVMIS 175

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 77.6 bits (190), Expect = 6e-18
 Identities = 37/181 (20%), Positives = 60/181 (33%), Gaps = 31/181 (17%)

Query: 25  VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
           +  + +A V+  +G P  +E    V+VP   P +VLV+  A  +   D     G      
Sbjct: 2   LPQTMKAAVVHAYGAPLRIE---EVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKP 58

Query: 85  EPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRG----------------- 127
               P I G +  G VAAVG+ V  +  G  V      TA                    
Sbjct: 59  PL--PFIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQN 116

Query: 128 -------TYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLV 180
                   YA+Y +   + +   P +V                  ++      EG+ +L 
Sbjct: 117 TGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQILDQMRAGQI--EGRIVLE 174

Query: 181 L 181
           +
Sbjct: 175 M 175

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 76.8 bits (188), Expect = 2e-17
 Identities = 30/197 (15%), Positives = 58/197 (29%), Gaps = 50/197 (25%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           C+A V    G P  +E    +EV   K +EV ++  A ++   D    SG       P++
Sbjct: 7   CKAAVAWEAGKPLSIE---EIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVI 63

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR---------------------- 126
               G   +G V +VG  V  L  G  V     P                          
Sbjct: 64  L---GHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120

Query: 127 ----------------------GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164
                                  T+++Y V+++  +      +   +      +     +
Sbjct: 121 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINK 180

Query: 165 ALKCAARMSEGQRLLVL 181
           A +        + ++ +
Sbjct: 181 AFELMHSGKSIRTVVKI 197

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 74.2 bits (181), Expect = 2e-16
 Identities = 29/197 (14%), Positives = 55/197 (27%), Gaps = 50/197 (25%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           C+A V      P V+E    +EV     NE+ ++  A  +   D             P++
Sbjct: 9   CKAAVAWEANKPLVIE---EIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVV 65

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGA----------------------------- 119
               G + +G V +VG  V     G++V                                
Sbjct: 66  L---GHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPD 122

Query: 120 ---------------LHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164
                          +       T++ Y V+++  +     SV   +         +   
Sbjct: 123 VMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVND 182

Query: 165 ALKCAARMSEGQRLLVL 181
           A+         + +L L
Sbjct: 183 AIDLMKHGKCIRTVLSL 199

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 69.5 bits (169), Expect = 2e-15
 Identities = 36/152 (23%), Positives = 55/152 (36%), Gaps = 22/152 (14%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A VL R GGP  L    ++  P+ +  EV++R  AV +N  D  MR G   +   P   
Sbjct: 2   KAWVLKRLGGPLELV---DLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHP--- 55

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTH 149
                        +        V    + AL P   +G  A+   + +  L P P     
Sbjct: 56  -----------PFIPGMEVVGVVEGRRYAALVP---QGGLAERVAVPKGALLPLPEGRPV 101

Query: 150 ADASAIPFAALTAWRALKCAARMSEGQRLLVL 181
                    A  A+RAL        G+ ++ L
Sbjct: 102 VGPVFPFAEAEAAFRALLDRGHT--GKVVVRL 131

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 70.8 bits (172), Expect = 2e-15
 Identities = 38/180 (21%), Positives = 61/180 (33%), Gaps = 34/180 (18%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGY-----GRSIF 84
           RAV L   G P  L+    + VP  K  +VL++  A  +   D  MR G           
Sbjct: 2   RAVRLVEIGKPLSLQ---EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58

Query: 85  EPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHP---------------------- 122
              LP+ LG +I+G++  VG  V   + G  V                            
Sbjct: 59  GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL 118

Query: 123 -TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAAL-TAWRALKCAARMSEGQRLLV 180
                G YA+Y ++   +   K   V       +       A   L+    +  G+++L+
Sbjct: 119 GINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLENFKAI--GRQVLI 176

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 70.6 bits (171), Expect = 3e-15
 Identities = 29/176 (16%), Positives = 59/176 (33%), Gaps = 10/176 (5%)

Query: 27  TSCRAVVLPRFGGP-EVLEVRP-NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF 84
            + +AV+  + G P +VL  +   ++  +L PNEV+V+T    +NP D     G   S  
Sbjct: 2   ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKP 61

Query: 85  EPLLPLILGRD----ISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDEL 140
                           +  +  V     +++  +     +      GT+  +A+ ++D+ 
Sbjct: 62  AKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDF 121

Query: 141 TPKPVSVTHADASAIPFAALTAWRAL-KCAARMSEGQRLLVLGGG-GAVGFAAVQF 194
              P               LT  +++            L   G      G   + +
Sbjct: 122 IKLPNPAQSKA--NGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY 175

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 69.7 bits (169), Expect = 3e-15
 Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 10/153 (6%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
             +   + GGPEVL+        D   NE+ V  +A+ IN +DT +RSG       P LP
Sbjct: 2   TRIEFHKHGGPEVLQAV-EFTPADPAENEIQVENKAIGINFIDTYIRSGL---YPPPSLP 57

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDEL--TPKPVSV 147
             LG + +G V+ VG+ V+ +  G  V  A       G Y+    +  D+    P  + V
Sbjct: 58  SGLGTEAAGIVSKVGSGVKHIKAGDRVVYAQSA---LGAYSSVHNIIADKAAILPAAIKV 114

Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRLLV 180
             A+    P         +   +R ++G  LL+
Sbjct: 115 DVAEQQKYPLKDAQRAHEIL-ESRATQGSSLLI 146

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.7 bits (172), Expect = 3e-15
 Identities = 37/181 (20%), Positives = 59/181 (32%), Gaps = 33/181 (18%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
            ++V+    GP  L +  N  +P+  PNEVL+R  +V I   D           F    P
Sbjct: 9   LSLVVH---GPGDLRLE-NYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKP 64

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPT------------------------AV 125
           ++LG + SG V  VG+SV+ L  G  V                                 
Sbjct: 65  MVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPD 124

Query: 126 RGTYADYAVLSEDELTPKPVSVTHADASAIPFA-ALTAWRALKCAARMSEGQRLLVLGGG 184
            G    +   +       P +V        P   AL A+       +   G ++++    
Sbjct: 125 DGNLCRFYKHNAAFCYKLPDNVKPLVTHRFPLEKALEAFE----TFKKGLGLKIMLKCDP 180

Query: 185 G 185
            
Sbjct: 181 S 181

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 65.3 bits (158), Expect = 2e-13
 Identities = 32/202 (15%), Positives = 61/202 (30%), Gaps = 58/202 (28%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           C+A +  + G P  +E    +EV   K  EV ++  A  + P D        +++F    
Sbjct: 9   CKAAIAWKTGSPLCIE---EIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALFPV-- 63

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFG------------------------------ 118
             +LG + +G V +VG  V +   G +V                                
Sbjct: 64  --VLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPT 121

Query: 119 ------------------ALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAAL 160
                             +++      +++ Y V+SE  L                    
Sbjct: 122 IDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPFE 181

Query: 161 TAWRALKCAARMSEGQRLLVLG 182
           +   A+     M EG+ +  + 
Sbjct: 182 SINDAI---DLMKEGKSIRTIL 200

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 63.5 bits (153), Expect = 8e-13
 Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 5/127 (3%)

Query: 147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC 206
           ++   A+A     LT +  L+    +   ++ L     G VG  A Q++ A G  +  T 
Sbjct: 1   ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTV 60

Query: 207 GSK-SIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG 261
           G+       L AGA Q ++Y  +D+   +K    GK   V+      +T    L+ L+R 
Sbjct: 61  GTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRR 120

Query: 262 GHYMTLH 268
           G  ++  
Sbjct: 121 GLMVSFG 127

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 61.5 bits (148), Expect = 3e-12
 Identities = 41/177 (23%), Positives = 60/177 (33%), Gaps = 33/177 (18%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +A V+ +F  P  ++    VE P +   EVLVR +A  +   D     G      +   P
Sbjct: 2   KAAVVEQFKEPLKIK---EVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKL--P 56

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR----------------------- 126
           LI G +  G V  VG  V  L VG  V      +A                         
Sbjct: 57  LIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSV 116

Query: 127 -GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLG 182
            G YA+Y   + D +   P +    +   +        R LK       G+ +L L 
Sbjct: 117 DGGYAEYCRAAADYVVKIPDNTI-IEVQPLEKINEVFDRMLKGQIN---GRVVLTLE 169

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 58.8 bits (141), Expect = 3e-11
 Identities = 20/128 (15%), Positives = 38/128 (29%), Gaps = 7/128 (5%)

Query: 152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS- 210
              I     T + +    A++++G    V G GG      +    A    +     +K  
Sbjct: 6   VCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDK 65

Query: 211 IDRVLAAGAEQAVDYSSKD------IELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHY 264
             +    GA + V+           +     G  D   + IG  +T    L+  +     
Sbjct: 66  FAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGV 125

Query: 265 MTLHGETA 272
             + G   
Sbjct: 126 SVIVGVPP 133

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 58.1 bits (139), Expect = 7e-11
 Identities = 22/135 (16%), Positives = 41/135 (30%), Gaps = 17/135 (12%)

Query: 147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGG-GGAVGFAAVQFSVASGCHVSAT 205
           +T    + I    LTA+  L    +++ G+   +  G   AVG  A Q       +  + 
Sbjct: 1   LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISV 60

Query: 206 CGSKSIDRVL-----AAGAEQAVDYSS----------KDIELAIKGKFDAVLDTIGAPET 250
              +     +       GA Q +              K+      G+    L+ +G   +
Sbjct: 61  IRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSS 120

Query: 251 ERLGLNFLKRGGHYM 265
                  L   G  +
Sbjct: 121 TG-IARKLNNNGLML 134

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 57.6 bits (138), Expect = 1e-10
 Identities = 34/193 (17%), Positives = 57/193 (29%), Gaps = 28/193 (14%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
            A V P  G    L+    +++   + +EVLV+  A  +   D  +R       +   LP
Sbjct: 5   IAAVTPCKGADFELQ---ALKIRQPQGDEVLVKVVATGMCHTDLIVRDQK----YPVPLP 57

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEVFG--------------------ALHPTAVRGTY 129
            +LG + SG + A+G +V  L VG  V                              G  
Sbjct: 58  AVLGHEGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGAD 117

Query: 130 ADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGF 189
           ++                  A +S   +A       +K        Q L+       +  
Sbjct: 118 SEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQ-LVKFYAFDEINQ 176

Query: 190 AAVQFSVASGCHV 202
           AA+          
Sbjct: 177 AAIDSRKGITLKP 189

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 56.9 bits (136), Expect = 1e-10
 Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 1/116 (0%)

Query: 150 ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK 209
           A  + +  A +T +  L+   +   G+++ V+G GG                V+ T    
Sbjct: 7   AAVAPLLCAGITTYSPLR-HWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEA 65

Query: 210 SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
             +   A GA++ V+  + D   A    FD +L+T+ AP         LKR G   
Sbjct: 66  KREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMT 121

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 56.9 bits (136), Expect = 1e-10
 Identities = 22/125 (17%), Positives = 37/125 (29%), Gaps = 7/125 (5%)

Query: 152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS- 210
              +     T + A    A++  G    V G GG      +   VA    +     +K  
Sbjct: 6   VCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDK 65

Query: 211 IDRVLAAGAEQAVDYSSKD------IELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHY 264
             R    GA + ++           +     G  D   + IG  +  R  L    +G   
Sbjct: 66  FARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGV 125

Query: 265 MTLHG 269
             + G
Sbjct: 126 SVVVG 130

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 56.6 bits (135), Expect = 2e-10
 Identities = 22/125 (17%), Positives = 37/125 (29%), Gaps = 7/125 (5%)

Query: 152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS- 210
              +     T + A    A++  G    V G G     A +    A    + A   +   
Sbjct: 6   VCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDK 65

Query: 211 IDRVLAAGAEQAVDYSSKD------IELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHY 264
            ++    GA   V+ +         +     G  D  L+ +G     R  L    +G   
Sbjct: 66  FEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGV 125

Query: 265 MTLHG 269
             L G
Sbjct: 126 SVLVG 130

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 56.2 bits (134), Expect = 2e-10
 Identities = 31/175 (17%), Positives = 55/175 (31%), Gaps = 29/175 (16%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           +A  L  +  P  +E   +V+ P L+   +V+VR     +   D  +  G    + +P L
Sbjct: 1   KAARLHEYNKPLRIE---DVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKL 57

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHP-----------------------TAV 125
           P  LG +  G +  V   V  L  G  V                               +
Sbjct: 58  PYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNI 117

Query: 126 RGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLV 180
            G +A++   S   +   P  V                  L+    +  G+ +L+
Sbjct: 118 DGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERLEKGEVL--GRAVLI 170

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 56.4 bits (135), Expect = 3e-10
 Identities = 30/187 (16%), Positives = 57/187 (30%), Gaps = 45/187 (24%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
             A+VL +F  P V +     E+ D+    +LV   +  +   D  M  G    +  P++
Sbjct: 5   AHAMVLEKFNQPLVYK---EFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPII 61

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTA------------------------ 124
               G     EV      +    +        +                           
Sbjct: 62  LGHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYG 121

Query: 125 ----------VRGTYADYAVLS-EDELTPKPVSVTHADASAIPFAALTAWRALKCAARMS 173
                     +RG Y+ + VL  E ++      +TH     +P     A +AL+      
Sbjct: 122 INRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITH----RLPLK--EANKALE-LMESR 174

Query: 174 EGQRLLV 180
           E  ++++
Sbjct: 175 EALKVIL 181

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 55.0 bits (131), Expect = 7e-10
 Identities = 26/124 (20%), Positives = 44/124 (35%), Gaps = 6/124 (4%)

Query: 150 ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK 209
            + + +  A +TA+RA+K AAR       + + G G +G  AVQ               K
Sbjct: 7   VEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVK 66

Query: 210 SIDRVLAAGAEQAVDYSSKD------IELAIKGKFDAVLDTIGAPETERLGLNFLKRGGH 263
                LA          ++       +EL      +  +D +G+  T       L R G 
Sbjct: 67  EEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGR 126

Query: 264 YMTL 267
            + +
Sbjct: 127 LIIV 130

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 54.7 bits (130), Expect = 1e-09
 Identities = 30/152 (19%), Positives = 50/152 (32%), Gaps = 8/152 (5%)

Query: 152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI 211
              I    LTA+  L     +  G+ +LV    GAVG    Q +   GC V    GS   
Sbjct: 7   LGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEK 66

Query: 212 DRVLAAGAEQA------VDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
              L      A      V+   + ++ A    +D   D +G      +       G   +
Sbjct: 67  IAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFG--KI 124

Query: 266 TLHGETAALADHYGLALGLPIATTVLLKKRMQ 297
            + G  +       L  G    + +  + R++
Sbjct: 125 AICGAISVYNRMDQLPPGPSPESIIYKQLRIE 156

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 52.6 bits (125), Expect = 5e-09
 Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 7/126 (5%)

Query: 148 THADASAIPFAALTAW---RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA 204
           T  +A AI  A  TA      L+      E   +LV G  G VG  AV      G  V A
Sbjct: 2   TLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEA 61

Query: 205 TCG-SKSIDRVLAAGAEQAVDYSSKDIELAIK---GKFDAVLDTIGAPETERLGLNFLKR 260
           + G +   D +   GA++ +       E        ++ A +D +G      +       
Sbjct: 62  STGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYG 121

Query: 261 GGHYMT 266
           G   ++
Sbjct: 122 GAVAVS 127

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.5 bits (125), Expect = 7e-09
 Identities = 22/176 (12%), Positives = 51/176 (28%), Gaps = 40/176 (22%)

Query: 37  FGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDI 96
           +  P+  +  P         +++ ++  A  +   D    +G+        +PL++G +I
Sbjct: 18  WKNPKKTKYDP----KPFYDHDIDIKIEACGVCGSDIHCAAGH---WGNMKMPLVVGHEI 70

Query: 97  SGEVAAVGA--------------------------------SVRSLTVGQEVFGALHPTA 124
            G+V  +G                                    +  V            
Sbjct: 71  VGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYV 130

Query: 125 VRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLV 180
            +G YA+Y  + E  + P P ++              A+  ++    +     L+ 
Sbjct: 131 SQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERME-KGDVRYRFTLVG 185

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 52.2 bits (124), Expect = 1e-08
 Identities = 37/203 (18%), Positives = 61/203 (30%), Gaps = 61/203 (30%)

Query: 29  CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
           C+A VL     P  +E    VEV   K +EV ++  A  I   D  + SG   +      
Sbjct: 9   CKAAVLWEEKKPFSIE---EVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPV-- 63

Query: 89  PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR---------------------- 126
             I G + +G V ++G  V ++  G +V     P   +                      
Sbjct: 64  --IAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRG 121

Query: 127 ----------------------GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164
                                  T++ Y V+ E  +            +A     L    
Sbjct: 122 TMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKID--------AAFALDPLIT-- 171

Query: 165 ALKCAARMSEGQRLLVLGGGGAV 187
            +    +++EG  LL  G     
Sbjct: 172 HVLPFEKINEGFDLLRSGESIRT 194

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 51.0 bits (121), Expect = 2e-08
 Identities = 24/127 (18%), Positives = 40/127 (31%), Gaps = 7/127 (5%)

Query: 150 ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK 209
            ++  I     T + A    A+++ G    V G GG    A V    A    +      K
Sbjct: 3   LESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHK 62

Query: 210 S-IDRVLAAGAEQAVDYSSKDIELAIK------GKFDAVLDTIGAPETERLGLNFLKRGG 262
               + +  GA + ++    D  +         G  D  ++  G  ET    L     G 
Sbjct: 63  DKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGS 122

Query: 263 HYMTLHG 269
               + G
Sbjct: 123 GVTVVLG 129

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 50.3 bits (119), Expect = 4e-08
 Identities = 35/204 (17%), Positives = 60/204 (29%), Gaps = 61/204 (29%)

Query: 26  TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFE 85
             +C+A V      P  LE    + V   K +EV ++  A  I   D+ +      S F 
Sbjct: 6   DITCKAAVAWEPHKPLSLE---TITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKFP 62

Query: 86  PLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR------------------- 126
                ILG +  G V ++GA V  +  G +V     P                       
Sbjct: 63  V----ILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGA 118

Query: 127 -------------------------GTYADYAVLSEDELTPKPVSVTHADASAIPFAALT 161
                                     T+ +Y V+++  +              I    L 
Sbjct: 119 KTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKID--------PKINVNFLV 170

Query: 162 AWRALKCAARMSEGQRLLVLGGGG 185
           + +      ++++   LL  G G 
Sbjct: 171 STKL--TLDQINKAFELLSSGQGV 192

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 47.6 bits (113), Expect = 4e-08
 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 4/76 (5%)

Query: 148 THADASAIPFAALTAWRA---LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA 204
               A  I  A  TA      L+ A    +   ++V G  G VG  AV      G  V A
Sbjct: 2   DARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVA 61

Query: 205 TCGSKS-IDRVLAAGA 219
             G +S  + + + GA
Sbjct: 62  VSGRESTHEYLKSLGA 77

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 49.1 bits (116), Expect = 7e-08
 Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 7/120 (5%)

Query: 152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS--K 209
              +     T   A   A +++     +  G G  VG +A+  +   G  +         
Sbjct: 6   LGPLGCGIQTGAGACINALKVTPASSFVTWGAGA-VGLSALLAAKVCGASIIIAVDIVES 64

Query: 210 SIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
            ++     GA   ++  ++D   AIK    G  +  L++ G+PE  + G++ L   G   
Sbjct: 65  RLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIA 124

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 49.5 bits (117), Expect = 9e-08
 Identities = 26/208 (12%), Positives = 56/208 (26%), Gaps = 48/208 (23%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLK-------PNEVLVRTRAVSINPLDTRMRSGYGRS 82
           R VV   + G   +EV+  ++ P ++        + V+++  + +I   D  M  G   +
Sbjct: 3   RGVV---YLGSGKVEVQ-KIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA 58

Query: 83  IFEPLLPLILGRDISGEVAAVGASVRSLTVGQEV-------------------------- 116
               +L   +  ++  +   V        V                              
Sbjct: 59  QVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARA 118

Query: 117 ---FGALHPTAVRGTYADYAVL--SEDELTPKPVSVTHADASAIPFAALTAWRALKCAAR 171
              +G +      G  A+Y ++  ++  L   P      +   I         +L   A 
Sbjct: 119 GGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVISLD-DAP 177

Query: 172 MSEGQRLLVLGGGGAVGFAAVQFSVASG 199
              G+        G      +       
Sbjct: 178 RGYGE-----FDAGVPKKFVIDPHKTFS 200

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 48.4 bits (114), Expect = 2e-07
 Identities = 20/123 (16%), Positives = 37/123 (30%), Gaps = 11/123 (8%)

Query: 152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-- 209
            +    +  TA+ A         G+ +++ G G  +G   V  + + G            
Sbjct: 6   LAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGP-LGLFGVVIARSLGAENVIVIAGSPN 64

Query: 210 --------SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRG 261
                     D  L        +     +++      D +L+  G       G   L+RG
Sbjct: 65  RLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG 124

Query: 262 GHY 264
           G Y
Sbjct: 125 GFY 127

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 47.6 bits (112), Expect = 3e-07
 Identities = 24/138 (17%), Positives = 43/138 (31%), Gaps = 7/138 (5%)

Query: 152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS- 210
              I     + + A    A+++ G    V G G     A +   +A    + A   +   
Sbjct: 6   VCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEK 65

Query: 211 IDRVLAAGAEQAVDYSSKD------IELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHY 264
             +  A GA   ++    D      I     G  D  LD  G  +T +  ++    G   
Sbjct: 66  FPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGS 125

Query: 265 MTLHGETAALADHYGLAL 282
            T+ G          + +
Sbjct: 126 CTVVGAKVDEMTIPTVDV 143

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 47.0 bits (110), Expect = 4e-07
 Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 7/123 (5%)

Query: 151 DASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS 210
           +A+    A LTAW +L    R+S G+R+L+    G VG AAV  +   G  +  T GS +
Sbjct: 2   EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDA 61

Query: 211 IDRVLAAGA------EQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHY 264
              +L+          ++VD++ + +EL      D VL+++     +R     L  GG +
Sbjct: 62  KREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGV-QILAPGGRF 120

Query: 265 MTL 267
           + L
Sbjct: 121 IEL 123

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.9 bits (110), Expect = 5e-07
 Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 2/56 (3%)

Query: 153 SAIPFAALTAWRALKCAARMSEG--QRLLVLGGGGAVGFAAVQFSVASGCHVSATC 206
            AI    LT+   ++    +S G  Q ++V G  GA G  A Q     GC      
Sbjct: 7   GAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGI 62

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 45.4 bits (106), Expect = 1e-06
 Identities = 23/103 (22%), Positives = 35/103 (33%), Gaps = 7/103 (6%)

Query: 158 AALTAW---RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRV 214
           A  TA      L+      E   +LV G  G VG  AV      G  V A+ G++     
Sbjct: 4   AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADY 63

Query: 215 LAAGAEQA----VDYSSKDIELAIKGKFDAVLDTIGAPETERL 253
           L            D     ++   K ++   +D +G  +   L
Sbjct: 64  LKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGGKQLASL 106

>d1vj1a1 b.35.1.2 (A:-1-124,A:312-351) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 166

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.7 bits (97), Expect = 3e-05
 Identities = 24/161 (14%), Positives = 42/161 (26%), Gaps = 16/161 (9%)

Query: 30  RAVVL---PRFGG---PEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSI 83
           + VVL   P   G    E   V     +  L   +V VRT  +S++P      +    + 
Sbjct: 6   QRVVLNSRPGKNGNPVAENFRVEEFSLLDALNEGQVQVRTLYLSVDPYMRCKMNEDTGTD 65

Query: 84  FEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPK 143
           +     L    D  G      +  + L  G  V            +   A+L  + L   
Sbjct: 66  YLAPWQLAQVADGGGIGIVEESKHQKLAKGDFVTSFY------WPWQTKAILDGNGLEKV 119

Query: 144 PVSVTHADASAIP----FAALTAWRALKCAARMSEGQRLLV 180
              +                +               Q + +
Sbjct: 120 DPQLVDGLKVKETVAKGLENMGVAFQSMMTGGNVGKQIVCI 160

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 177

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 41.4 bits (96), Expect = 3e-05
 Identities = 30/123 (24%), Positives = 43/123 (34%), Gaps = 6/123 (4%)

Query: 148 THADASAIPFAALTAW---RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSA 204
               A  I  A  TA     AL+ A    +   ++V G  G VG  AV      G  V A
Sbjct: 2   DARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVA 61

Query: 205 TCGSKSIDRVLAAGAEQAVDYSSKDIELAI--KGKFDAVLDTIGAPETERLGLNFLKRGG 262
             G +S    L +     V    +  E     K  +   +DT+G     ++ L  +  GG
Sbjct: 62  VSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTVGDKVLAKV-LAQMNYGG 120

Query: 263 HYM 265
              
Sbjct: 121 CVA 123

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 40.9 bits (94), Expect = 5e-05
 Identities = 24/126 (19%), Positives = 54/126 (42%), Gaps = 8/126 (6%)

Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGG--GGAVGFAAVQFSVASGCHVSAT 205
              +A+ +  + +T +RA++  A +   + LLV+G   G       +  +V+    +   
Sbjct: 2   NAVEAAPLTCSGITTYRAVR-KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVD 60

Query: 206 CGSKSIDRVLAAGAEQAVDYSSKD-----IELAIKGKFDAVLDTIGAPETERLGLNFLKR 260
              ++++    AGA+  ++ S +D       +      DAV+D   + +T  +    L +
Sbjct: 61  VREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAK 120

Query: 261 GGHYMT 266
            G Y+ 
Sbjct: 121 QGKYVM 126

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 41.0 bits (95), Expect = 5e-05
 Identities = 20/126 (15%), Positives = 37/126 (29%), Gaps = 9/126 (7%)

Query: 152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS--K 209
              I     T + A     ++  G   +V G GG VG + +    ++G            
Sbjct: 7   VCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGG-VGLSVIMGCKSAGASRIIGIDLNKD 65

Query: 210 SIDRVLAAGAEQAVDYSSKDIELAIKGK------FDAVLDTIGAPETERLGLNFLKRGGH 263
             ++ +A GA + +        ++               + IG  ET    L        
Sbjct: 66  KFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYG 125

Query: 264 YMTLHG 269
              + G
Sbjct: 126 TSVVVG 131

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 40.4 bits (94), Expect = 6e-05
 Identities = 20/135 (14%), Positives = 39/135 (28%), Gaps = 21/135 (15%)

Query: 30  RAVVLP-RFGG---PEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFE 85
           ++  L   F G       E++  VE+P LK  EVL+    +S++P           S   
Sbjct: 5   KSWTLKKHFQGKPTQSDFELK-TVELPPLKNGEVLLEALFLSVDPYM------RIASKRL 57

Query: 86  PLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPV 145
               +++G+        V +   +   G  V         +  +  + +     L     
Sbjct: 58  KEGAVMMGQ---QVARVVESKNSAFPAGSIVLA-------QSGWTTHFISDGKGLEKLLT 107

Query: 146 SVTHADASAIPFAAL 160
                          
Sbjct: 108 EWPDKKIQYHEHVTK 122

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 40.7 bits (94), Expect = 7e-05
 Identities = 31/175 (17%), Positives = 45/175 (25%), Gaps = 40/175 (22%)

Query: 30  RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
           +AV       P  LE   ++   +  PN+V +      +   D             P +P
Sbjct: 2   KAVGAYSAKQP--LEPM-DITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVP 58

Query: 90  LILGRDISGEVAAVGASVRSLTVGQEV--------------------------------F 117
                +I G V AVG  V     G  V                                 
Sbjct: 59  GH---EIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSP 115

Query: 118 GALHPTAVRGTYADYAVLSEDELTPKPVSVTHAD-ASAIPFAALTAWRA-LKCAA 170
               P    G Y+   V+ E  +    V+      A  I  A     R  +K   
Sbjct: 116 TPDEPGHTLGGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERMLRGDVKYRF 170

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.0 bits (92), Expect = 9e-05
 Identities = 15/118 (12%), Positives = 36/118 (30%), Gaps = 4/118 (3%)

Query: 152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI 211
           A+ +    LT +  L        G+++ ++G GG      +            +  S+  
Sbjct: 6   AAPLLCGGLTVYSPLV-RNGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKR 64

Query: 212 DRVLAAGAEQAVDYSSKDIELAIKGKFDA---VLDTIGAPETERLGLNFLKRGGHYMT 266
           +  +  GA+  +    +               V  +        +    +K GG  ++
Sbjct: 65  EDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVS 122

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (90), Expect = 2e-04
 Identities = 21/59 (35%), Positives = 29/59 (49%)

Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC 206
                +AI     TA+RAL  +A +  G+ +LV G  G VG AA Q + A G  +  T 
Sbjct: 2   DFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTA 60

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.9 bits (89), Expect = 2e-04
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC 206
           V  A+ + I  A +T ++ LK       GQ + +  G G +G  AVQ++ A G HV+A  
Sbjct: 1   VEFAEIAPILCAGVTVYKGLK-QTNARPGQWVAI-SGIGGLGHVAVQYARAMGLHVAAID 58

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 38.0 bits (87), Expect = 4e-04
 Identities = 9/60 (15%), Positives = 17/60 (28%), Gaps = 4/60 (6%)

Query: 30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
          +   +        +E     E P     + +VR  AVS    D            + ++ 
Sbjct: 2  KGFAMLGINKLGWIEK----ERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMIL 57

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 38.0 bits (87), Expect = 5e-04
 Identities = 25/124 (20%), Positives = 43/124 (34%), Gaps = 9/124 (7%)

Query: 151 DASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS 210
           +A  I     T +   +  A +  G  ++V+G G  VG   +  +   G       GS+ 
Sbjct: 5   NAVMITDMMTTGFHGAE-LADIEMGSSVVVIGIGA-VGLMGIAGAKLRGAGRIIGVGSRP 62

Query: 211 IDRVLAAGAEQAVDYSSKD-------IELAIKGKFDAVLDTIGAPETERLGLNFLKRGGH 263
           I    A         + K+       ++L      D V+   G  ET    +  +K GG 
Sbjct: 63  ICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGI 122

Query: 264 YMTL 267
              +
Sbjct: 123 ISNI 126

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 38.3 bits (88), Expect = 5e-04
 Identities = 21/105 (20%), Positives = 31/105 (29%), Gaps = 9/105 (8%)

Query: 151 DASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS 210
           D + +     T +     A  +  G  + V G G  VG AA   +   G  V        
Sbjct: 3   DLTCLSDILPTGYHGAVTA-GVGPGSTVYVAGAGP-VGLAAAASARLLGAAVVIVGDLNP 60

Query: 211 IDRVLA--AGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAP 248
                A   G E A       +   I       + D  +D +G  
Sbjct: 61  ARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFE 105

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 37.7 bits (86), Expect = 5e-04
 Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLV 180
           ++  +A+A P + LTA+ ALK  A+   G+++LV
Sbjct: 1   LSPEEAAAFPVSFLTAYLALK-RAQARPGEKVLV 33

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 35.9 bits (81), Expect = 0.002
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%)

Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG 207
           +  +A+ I  A +T ++ALK       G+ + +  G G +G  AVQ++ A G +V A   
Sbjct: 2   SFEEAAPIFCAGVTTYKALK-VTGAKPGEWVAI-YGIGGLGHVAVQYAKAMGLNVVAVDI 59

Query: 208 SKS 210
              
Sbjct: 60  GDE 62

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	307
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.97
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.97
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.96
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.96
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.96
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.96
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.95
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.95
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.95
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.95
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.95
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.95
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.94
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.94
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	99.94
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.93
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.93
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.92
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.92
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.92
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.92
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.91
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.91
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.9
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.89
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.87
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.87
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.87
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.86
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.85
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.85
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.85
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.85
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.84
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.84
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.84
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.83
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.83
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.83
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.82
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.82
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.82
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.81
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.8
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.79
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.79
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.78
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.77
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.76
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.75
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.73
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.72
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.72
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.71
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.35
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	98.44
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	98.38
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	98.33
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	98.32
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	98.31
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	98.3
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	98.28
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	98.27
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	98.26
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	98.24
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	98.24
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	98.24
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	98.24
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	98.23
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	98.23
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	98.21
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	98.19
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	98.19
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	98.18
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	98.18
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	98.17
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	98.17
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	98.16
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	98.16
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	98.11
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	98.1
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	98.1
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	98.09
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	98.07
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	98.07
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	98.07
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	98.05
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	98.03
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	98.02
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	98.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	98.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	97.99
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.98
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	97.98
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.95
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	97.95
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	97.93
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	97.92
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.9
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.88
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.87
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	97.87
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	97.87
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.81
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	97.76
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	97.75
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.74
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	97.73
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.7
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.69
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	97.64
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.62
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.54
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	97.49
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.43
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.4
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	97.36
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.26
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	97.14
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	97.04
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	97.02
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	97.02
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	96.99
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	96.97
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	96.93
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	96.93
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	96.93
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	96.9
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.89
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	96.89
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	96.87
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	96.85
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	96.76
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.73
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	96.72
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.72
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	96.68
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.62
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.57
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.54
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	96.38
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.37
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	96.31
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.31
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.25
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.22
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.2
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.19
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.11
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	96.08
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.06
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.95
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	95.89
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	95.85
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.57
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	95.54
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	95.53
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	95.5
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	95.5
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	95.46
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.35
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.32
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	95.28
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.21
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.19
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	95.02
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.01
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.99
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	94.97
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	94.89
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.88
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.88
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	94.77
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.59
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	94.52
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	94.51
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	94.37
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	94.37
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.31
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.3
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	94.29
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	94.22
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	94.21
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	94.12
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.09
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	93.95
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	93.93
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	93.89
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	93.85
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	93.66
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	93.64
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	93.61
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	93.6
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	93.59
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	93.57
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	93.54
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	93.54
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	93.52
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	93.52
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.48
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	93.47
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	93.34
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	93.18
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	93.05
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	93.03
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	92.96
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	92.94
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	92.84
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	92.82
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	92.63
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	92.47
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	92.42
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	92.42
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	92.4
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	92.39
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	92.31
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	92.15
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.1
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	91.97
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	91.88
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	91.81
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	91.68
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	91.67
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	91.59
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	91.47
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	91.42
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.37
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	91.36
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	91.36
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	91.35
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	91.34
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	91.32
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	91.06
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	90.98
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.8
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	90.72
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	90.66
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	90.5
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	90.46
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	90.23
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	90.05
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	90.02
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	89.98
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.95
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	89.94
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	89.82
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	89.78
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	89.73
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.72
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	89.63
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	89.52
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	89.4
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	89.34
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	89.28
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	89.27
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	89.27
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	89.23
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	89.18
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	89.18
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	89.17
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	89.16
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.99
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	88.67
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	88.51
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	88.32
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	88.31
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	88.25
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	88.22
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	88.16
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	88.1
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	87.97
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	87.94
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	87.83
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	87.82
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	87.78
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	87.64
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	87.41
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	87.21
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	86.98
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	86.89
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	86.76
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	86.6
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	86.59
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	86.48
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	86.06
d3cmco1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.02
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	86.0
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	85.82
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	85.81
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.79
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	85.75
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	85.69
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	85.53
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	85.5
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	85.41
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	85.32
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	85.02
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	85.0
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	84.97
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	84.74
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	84.64
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	84.64
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	84.25
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	84.17
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	84.17
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	84.12
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	83.5
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	83.1
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	83.02
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	82.8
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	82.76
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	82.38
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	82.35
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	82.35
d1ebfa1	168	Homoserine dehydrogenase {Baker's yeast (Saccharom	82.33
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	82.26
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	82.09
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	82.07
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	81.89
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	81.83
d2ax3a2	211	Hypothetical protein TM0922, N-terminal domain {Th	81.82
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	81.81
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	81.79
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	81.76
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	81.57
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	81.48
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	81.17
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	81.12
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	80.48
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	80.34
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	80.28

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.9e-31  Score=207.97  Aligned_cols=149  Identities=32%  Similarity=0.539  Sum_probs=135.6

Q ss_pred             ceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCC
Q 021831           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (307)
Q Consensus        28 ~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v  107 (307)
                      -|||++++++|++++++++++.+.|+|++|||+|||.+++||++|++.++|...  ....+|.++|||++|+|+++|+++
T Consensus         2 ~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~--~~~~~p~i~G~e~~G~V~~vG~~v   79 (150)
T d1yb5a1           2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS--RKPLLPYTPGSDVAGVIEAVGDNA   79 (150)
T ss_dssp             EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSS--CCCCSSBCCCSCEEEEEEEECTTC
T ss_pred             ceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcC--ccccccccCccceeeeeEeeccee
Confidence            489999999999999998757899999999999999999999999999998543  235678999999999999999999


Q ss_pred             CCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEE
Q 021831          108 RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVL  181 (307)
Q Consensus       108 ~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~  181 (307)
                      ++|++||||++...   .+|+|+||+.++.+.++++|+++++++|++++..++|+|+.+...+..+.|+++||+
T Consensus        80 ~~~~vGdrV~~~~~---~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1          80 SAFKKGDRVFTSST---ISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             TTCCTTCEEEESCC---SSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             eccccCcccccccc---ccccccccccccccccccccCCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence            99999999988654   349999999999999999999999999999999999999998888899999999984

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.97  E-value=1.7e-30  Score=212.13  Aligned_cols=150  Identities=24%  Similarity=0.254  Sum_probs=130.8

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      |+|+ ++.   +++++++ +.+.|+|+++||+||+.++|||++|++++.+..........|+++|||++|+|+++|++++
T Consensus         3 maAV-l~g---~~~l~~~-e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~   77 (178)
T d1e3ja1           3 LSAV-LYK---QNDLRLE-QRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVK   77 (178)
T ss_dssp             EEEE-EEE---TTEEEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCC
T ss_pred             eEEE-EEc---CCcEEEE-EeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccC
Confidence            4554 553   4569999 9999999999999999999999999999987554455567899999999999999999999


Q ss_pred             CCCCCCEEEEecC------------------------CCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHH
Q 021831          109 SLTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (307)
Q Consensus       109 ~~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (307)
                      +|++||||+....                        ....+|+|+||+.++.++++++|+++++++++.+..++.|+|+
T Consensus        78 ~~~~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~  157 (178)
T d1e3ja1          78 HLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVD  157 (178)
T ss_dssp             SCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHHH
T ss_pred             CCCCCCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHHH
Confidence            9999999976432                        1235699999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCCCEEEEEcCC
Q 021831          165 ALKCAARMSEGQRLLVLGGG  184 (307)
Q Consensus       165 ~l~~~~~~~~g~~VlI~Ga~  184 (307)
                      +++ .+++++|++|+|+||.
T Consensus       158 a~~-~~~~~~g~~VlVig~C  176 (178)
T d1e3ja1         158 AFE-AARKKADNTIKVMISC  176 (178)
T ss_dssp             HHH-HHHHCCTTCSEEEEEC
T ss_pred             HHH-HhCCCCCCEEEEEccc
Confidence            986 8899999999999974

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.96  E-value=1.4e-29  Score=206.14  Aligned_cols=151  Identities=26%  Similarity=0.362  Sum_probs=131.0

Q ss_pred             ccccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEe
Q 021831           24 LVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAV  103 (307)
Q Consensus        24 ~~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~  103 (307)
                      +||++|||+++.+++.+  ++++ +.+.|.|+++||+|||.++|||++|++.++|.+.  ....+|.++|||++|+|+++
T Consensus         1 ~~P~tMkA~v~~~~g~p--l~l~-evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~--~~~~~P~i~GhE~~G~V~~~   75 (175)
T d1llua1           1 TLPQTMKAAVVHAYGAP--LRIE-EVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWP--VKPPLPFIPGHEGVGYVAAV   75 (175)
T ss_dssp             CCCSEEEEEEBCSTTSC--CEEE-EEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSS--SCCCSSBCCCSCEEEEEEEE
T ss_pred             CcchhcEEEEEEeCCCC--CEEE-EeECCCCCCCEEEEEEEEecCcccchhhhccCcc--ccccCCcCCCCcceEEEEEe
Confidence            47999999999988776  7888 9999999999999999999999999999999542  23568999999999999999


Q ss_pred             cCCCCCCCCCCEEEEecC------------------------CCCCCCcceeEEEecCCceeeCCCCCChhhhccccchH
Q 021831          104 GASVRSLTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAA  159 (307)
Q Consensus       104 G~~v~~~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~  159 (307)
                      |++++++++||||+....                        +...+|+|+||+.++.+.++++|++++++.++.+..++
T Consensus        76 G~~v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~~~~  155 (175)
T d1llua1          76 GSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDI  155 (175)
T ss_dssp             CTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEECCTTCCCCEEEECGGGH
T ss_pred             CCCccccccCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHHEEECCCCCChhHHHHHHhHH
Confidence            999999999999975321                        12356899999999999999999999998888888899


Q ss_pred             HHHHHHHHHHcCCCCCCEEEEE
Q 021831          160 LTAWRALKCAARMSEGQRLLVL  181 (307)
Q Consensus       160 ~ta~~~l~~~~~~~~g~~VlI~  181 (307)
                      .++++.++ ... .+|++|||+
T Consensus       156 ~t~~~~~~-~g~-~~G~~VLVl  175 (175)
T d1llua1         156 NQILDQMR-AGQ-IEGRIVLEM  175 (175)
T ss_dssp             HHHHHHHH-TTC-CSSEEEEEC
T ss_pred             HHHHHHHH-hCC-CCCCEEEeC
Confidence            99998875 444 469999984

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.96  E-value=9.7e-29  Score=200.14  Aligned_cols=146  Identities=21%  Similarity=0.330  Sum_probs=129.9

Q ss_pred             eEEEEcccCCCceeEEcCcccCCCC-CCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           30 RAVVLPRFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        30 ka~~~~~~~~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||+++.++|.+  |+++ +.+.|++ +++||+|||.+++||++|++.+.|.........+|+++|||++|+|+++|++++
T Consensus         1 kA~~~~~~g~p--l~i~-~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~   77 (171)
T d1h2ba1           1 KAARLHEYNKP--LRIE-DVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVE   77 (171)
T ss_dssp             CEEEESSTTSC--CEEE-CCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCC
T ss_pred             CEEEEEeCCCC--CEEE-EeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCC
Confidence            78999998877  8888 9999975 689999999999999999999999765555567899999999999999999999


Q ss_pred             CCCCCCEEEEecCC-----------------------CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHH
Q 021831          109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA  165 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  165 (307)
                      ++++||||+.....                       ...+|+|+||+.++.+.++++|++++++.++++..++.|+|++
T Consensus        78 ~~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~a  157 (171)
T d1h2ba1          78 GLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLER  157 (171)
T ss_dssp             SCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHHH
T ss_pred             cCCCCCEEEEcCccCCCCcccccccccccccccccceeecccccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHHH
Confidence            99999999875432                       1356999999999999999999999998888888999999999


Q ss_pred             HHHHcCCCCCCEEEE
Q 021831          166 LKCAARMSEGQRLLV  180 (307)
Q Consensus       166 l~~~~~~~~g~~VlI  180 (307)
                      ++ ..++ .|++|||
T Consensus       158 l~-~~~~-~G~~VlI  170 (171)
T d1h2ba1         158 LE-KGEV-LGRAVLI  170 (171)
T ss_dssp             HH-TTCC-SSEEEEE
T ss_pred             HH-hcCC-CCCEEEe
Confidence            96 6777 8999998

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.96  E-value=1.3e-28  Score=204.15  Aligned_cols=150  Identities=19%  Similarity=0.224  Sum_probs=133.0

Q ss_pred             ccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecC
Q 021831           26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (307)
Q Consensus        26 ~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~  105 (307)
                      ++++||+++++.+.+  ++++ |.+.|+|+++||+|||.++|||++|++++.|..   ....+|.++|||++|+|+++|+
T Consensus         6 ~~~~kAav~~~~~~p--l~i~-ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~---~~~~~p~i~GhE~~G~v~~vG~   79 (199)
T d1cdoa1           6 VIKCKAAVAWEANKP--LVIE-EIEVDVPHANEIRIKIIATGVCHTDLYHLFEGK---HKDGFPVVLGHEGAGIVESVGP   79 (199)
T ss_dssp             CEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTTC---CTTSCSEECCCCEEEEEEEECT
T ss_pred             ceEEEEEEEecCCCC--cEEE-EEECCCCCCCEEEEEEEEEEEecchhhhhhhcc---cccccccccccccceEEEEEcC
Confidence            356789999987766  8888 999999999999999999999999999999843   3457899999999999999999


Q ss_pred             CCCCCCCCCEEEEecCCC--------------------------------------------CCCCcceeEEEecCCcee
Q 021831          106 SVRSLTVGQEVFGALHPT--------------------------------------------AVRGTYADYAVLSEDELT  141 (307)
Q Consensus       106 ~v~~~~~Gd~V~~~~~~~--------------------------------------------~~~g~~~~~~~~~~~~~~  141 (307)
                      +++++++||||+......                                            ..+|+|+||++++.+.++
T Consensus        80 ~v~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~  159 (199)
T d1cdoa1          80 GVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVA  159 (199)
T ss_dssp             TCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEE
T ss_pred             CCceecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEE
Confidence            999999999998753311                                            014999999999999999


Q ss_pred             eCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEE
Q 021831          142 PKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVL  181 (307)
Q Consensus       142 ~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~  181 (307)
                      ++|+++++++++++.+++.|+++++......+.|++|||+
T Consensus       160 ~iP~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         160 KIDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             ECCTTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             ECCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            9999999999999999999999999988889999999984

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=1.7e-28  Score=201.94  Aligned_cols=154  Identities=16%  Similarity=0.200  Sum_probs=131.2

Q ss_pred             ccccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEe
Q 021831           24 LVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAV  103 (307)
Q Consensus        24 ~~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~  103 (307)
                      +.|.+||+|.+..+++..++++. +.+.++++++||+|||.++|||++|++++.|..   ....+|+++|||++|+|+++
T Consensus         2 ~~P~~~ka~~~~~~~~~~~~~~~-~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~---~~~~~P~i~GHE~~G~Vv~v   77 (192)
T d1piwa1           2 SYPEKFEGIAIQSHEDWKNPKKT-KYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHW---GNMKMPLVVGHEIVGKVVKL   77 (192)
T ss_dssp             CTTTCEEEEEECCSSSTTSCEEE-EECCCCCCTTEEEEEEEEEEECHHHHHHHTTTT---SCCCSSEECCCCEEEEEEEE
T ss_pred             CCCceeEEEEEeCCCcCCcceEe-eccCCCCCCCeEEEEEeeeCCCcchHHHHcCCC---CCCCCCcCcccccccchhhc
Confidence            57899999999999888888888 777677899999999999999999999999853   34578999999999999999


Q ss_pred             cCCC-CCCCCCCEEEEecC-------------------------------CCCCCCcceeEEEecCCceeeCCCCCChhh
Q 021831          104 GASV-RSLTVGQEVFGALH-------------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHAD  151 (307)
Q Consensus       104 G~~v-~~~~~Gd~V~~~~~-------------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~  151 (307)
                      |+++ +.+++||||.....                               +...+|+|+||+.++.++++++|+++++++
T Consensus        78 G~~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~e~  157 (192)
T d1piwa1          78 GPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVET  157 (192)
T ss_dssp             CTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCEEE
T ss_pred             ccccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCHHH
Confidence            9988 67999999964321                               122468999999999999999999999887


Q ss_pred             hccccchHHHHHHHHHHHcCCCCCCEEEEEc
Q 021831          152 ASAIPFAALTAWRALKCAARMSEGQRLLVLG  182 (307)
Q Consensus       152 aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~G  182 (307)
                      |+.+...+.|||++++ .+++++|++|||..
T Consensus       158 Aal~~~~~~ta~~~l~-~~~vk~g~~Vvv~~  187 (192)
T d1piwa1         158 LPVGEAGVHEAFERME-KGDVRYRFTLVGYD  187 (192)
T ss_dssp             EESSHHHHHHHHHHHH-HTCCSSEEEEECCH
T ss_pred             HHHHHHHHHHHHHHHH-HhCCCCCCEEEEEC
Confidence            7665544679999996 89999999999864

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=4.6e-28  Score=191.35  Aligned_cols=143  Identities=29%  Similarity=0.443  Sum_probs=125.0

Q ss_pred             eEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCCC
Q 021831           30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS  109 (307)
Q Consensus        30 ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~~  109 (307)
                      +.++|+++|+++.|+++ +.+.|+|++|||+|||.+++||++|+.+++|.+   ....+|.++|||++|+|+++|+++++
T Consensus         2 ~~i~~~~~G~pe~l~~~-e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~---~~~~~p~~~G~e~~G~V~~vG~~v~~   77 (147)
T d1qora1           2 TRIEFHKHGGPEVLQAV-EFTPADPAENEIQVENKAIGINFIDTYIRSGLY---PPPSLPSGLGTEAAGIVSKVGSGVKH   77 (147)
T ss_dssp             EEEEBSSCCSGGGCEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSS---CCSSSSBCCCSCEEEEEEEECTTCCS
T ss_pred             eEEEEcccCCCceeEEE-EecCCCCCCCEEEEEEEEecccceeeeeecCCC---CCCcceeeeccccccceeeeeeeccc
Confidence            56889999999999999 999999999999999999999999999999953   24578999999999999999999999


Q ss_pred             CCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhh--ccccchHHHHHHHHHHHcCCCCCCEEEE
Q 021831          110 LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADA--SAIPFAALTAWRALKCAARMSEGQRLLV  180 (307)
Q Consensus       110 ~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a--a~~~~~~~ta~~~l~~~~~~~~g~~VlI  180 (307)
                      |++||||+....   ..|+|+||..++.+.++++|++++++++  +.++....++++.+. ..++++|++|||
T Consensus        78 ~~vGdrV~~~~~---~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~-~~~~~~G~~VLI  146 (147)
T d1qora1          78 IKAGDRVVYAQS---ALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEIL-ESRATQGSSLLI  146 (147)
T ss_dssp             CCTTCEEEESCC---SSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHH-HTTCCCBCCEEE
T ss_pred             ccccceeeeecc---ccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEe
Confidence            999999976543   2489999999999999999999887644  455666778888775 467899999998

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.95  E-value=1.8e-28  Score=204.03  Aligned_cols=147  Identities=23%  Similarity=0.357  Sum_probs=127.9

Q ss_pred             ccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecC
Q 021831           26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (307)
Q Consensus        26 ~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~  105 (307)
                      +++|||+++++++.+  ++++ +.+.|+|+++||||||.++|||++|+++++|.    .+..+|+++|||++|+|+++|+
T Consensus         6 ~~~~KAaV~~~~g~p--l~i~-evp~P~p~~geVlVkv~a~gic~sD~~~~~G~----~~~~~P~v~GHE~~G~V~~vG~   78 (202)
T d1e3ia1           6 VIKCKAAIAWKTGSP--LCIE-EIEVSPPKACEVRIQVIATCVCPTDINATDPK----KKALFPVVLGHECAGIVESVGP   78 (202)
T ss_dssp             CEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHTTCTT----SCCCSSBCCCCEEEEEEEEECT
T ss_pred             eEEEEEEEEccCCCC--CEEE-EEECCCCCCCEEEEEEEEEEEeccccceeeee----cccccccccccccceEEeeecC
Confidence            458999999988766  8888 99999999999999999999999999999984    3456799999999999999999


Q ss_pred             CCCCCCCCCEEEEecCCC------------------------------------------------CCCCcceeEEEecC
Q 021831          106 SVRSLTVGQEVFGALHPT------------------------------------------------AVRGTYADYAVLSE  137 (307)
Q Consensus       106 ~v~~~~~Gd~V~~~~~~~------------------------------------------------~~~g~~~~~~~~~~  137 (307)
                      +|+++++||||+......                                                ..+|+|+||+.+++
T Consensus        79 ~V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~  158 (202)
T d1e3ia1          79 GVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSE  158 (202)
T ss_dssp             TCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEG
T ss_pred             CceeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEeh
Confidence            999999999998753211                                                01389999999999


Q ss_pred             CceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEc
Q 021831          138 DELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLG  182 (307)
Q Consensus       138 ~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~G  182 (307)
                      ..++++|++++++.+++..+++.+++.++.   .+++|++|.|+.
T Consensus       159 ~~l~~lP~~~~~~~~~~~~~~~~~~~~a~~---~~k~G~~V~vi~  200 (202)
T d1e3ia1         159 ANLARVDDEFDLDLLVTHALPFESINDAID---LMKEGKSIRTIL  200 (202)
T ss_dssp             GGEEECCTTSCGGGGEEEEEEGGGHHHHHH---HHHTTCCSEEEE
T ss_pred             hhEEECCCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCEEEEEE
Confidence            999999999999988888888888888875   246899998865

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=6.9e-28  Score=191.38  Aligned_cols=150  Identities=23%  Similarity=0.291  Sum_probs=130.4

Q ss_pred             ccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecC
Q 021831           26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (307)
Q Consensus        26 ~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~  105 (307)
                      |.+||||+++.++++..++++ +.++|+|++|||+|||.++|||++|+..+.|.+  ......|+++|+|++|+|++  +
T Consensus         1 m~~~KA~v~~~~~~~~~~~i~-~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~--~~~~~~p~v~g~e~~G~v~~--~   75 (152)
T d1xa0a1           1 MSAFQAFVVNKTETEFTAGVQ-TISMDDLPEGDVLVRVHYSSVNYKDGLASIPDG--KIVKTYPFVPGIDLAGVVVS--S   75 (152)
T ss_dssp             CCEEEEEEEEEETTEEEEEEE-EEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGG--SSCCSSSBCCCSEEEEEEEE--C
T ss_pred             CCceEEEEEEecCCceEEEEE-EccCCCCCCCEEEEEEEEeCCChHHHHHHhhcc--cccccccceeeeeeeeeeec--c
Confidence            468999999999988888898 999999999999999999999999999888843  22356889999999999998  5


Q ss_pred             CCCCCCCCCEEEEecCC--CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEc
Q 021831          106 SVRSLTVGQEVFGALHP--TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLG  182 (307)
Q Consensus       106 ~v~~~~~Gd~V~~~~~~--~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~G  182 (307)
                      +++.+++||+|++....  ...+|+|+||+.+|.++++++|++++ .++++++++.+|+|..+....+++ |++|||+|
T Consensus        76 ~~~~~~~g~~v~~~~~~~~~~~~G~~aEy~~v~~~~~~~iP~~l~-~~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1          76 QHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLE-RIAQEISLAELPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             CSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCEECCTTHH-HHEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred             CCCccccCCEEEEecCccccccCCCcceeeeehhhccccCCCCCC-HHHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence            56789999999887543  23569999999999999999999998 468888889899999888788876 99999975

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.95  E-value=1.2e-27  Score=197.76  Aligned_cols=150  Identities=22%  Similarity=0.289  Sum_probs=131.9

Q ss_pred             ccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecC
Q 021831           26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (307)
Q Consensus        26 ~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~  105 (307)
                      +++|||+++++++.+  |+++ +.|.|+|+++||||||.++|||++|+++++|..   ....+|+++|||++|+|+++|+
T Consensus         4 ~~~~kAav~~~~g~~--l~i~-evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~---~~~~~p~v~GhE~~G~V~~vG~   77 (197)
T d2fzwa1           4 VIKCKAAVAWEAGKP--LSIE-EIEVAPPKAHEVRIKIIATAVCHTDAYTLSGAD---PEGCFPVILGHLGAGIVESVGE   77 (197)
T ss_dssp             CEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTCC---TTCCSSBCCCCEEEEEEEEECT
T ss_pred             ceEEEEEEEccCCCC--CEEE-EEECCCCCCCEEEEEEEEecCCCCcHHHHcCCc---ccccccccCCcceeeEEEeecC
Confidence            356999999988776  8899 999999999999999999999999999999953   3457899999999999999999


Q ss_pred             CCCCCCCCCEEEEecCCC--------------------------------------------CCCCcceeEEEecCCcee
Q 021831          106 SVRSLTVGQEVFGALHPT--------------------------------------------AVRGTYADYAVLSEDELT  141 (307)
Q Consensus       106 ~v~~~~~Gd~V~~~~~~~--------------------------------------------~~~g~~~~~~~~~~~~~~  141 (307)
                      +|+.+++||||+......                                            ..+|+|+||++++...++
T Consensus        78 ~V~~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~  157 (197)
T d2fzwa1          78 GVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVA  157 (197)
T ss_dssp             TCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEE
T ss_pred             CceecCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEE
Confidence            999999999998653210                                            014899999999999999


Q ss_pred             eCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEE
Q 021831          142 PKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVL  181 (307)
Q Consensus       142 ~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~  181 (307)
                      ++|+++++++++.+.+++.+++.++.....-+.+++|||+
T Consensus       158 ~vp~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         158 KIDPLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             ECCTTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             ECCCCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            9999999999999999999999998766666789999884

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=2.1e-27  Score=192.44  Aligned_cols=146  Identities=28%  Similarity=0.401  Sum_probs=121.6

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      |||++++.++.+  ++++ +.+.|+|++|||+|||.++|||++|++++++..  .....+|.++|||++|+|+++|++++
T Consensus         1 MkA~v~~~~g~p--l~i~-~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~--~~~~~~p~v~GhE~~G~Vv~vG~~v~   75 (171)
T d1rjwa1           1 MKAAVVEQFKEP--LKIK-EVEKPTISYGEVLVRIKACGVCHTDLHAAHGDW--PVKPKLPLIPGHEGVGIVEEVGPGVT   75 (171)
T ss_dssp             CEEEEBSSTTSC--CEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCS--SSCCCSSBCCCSCEEEEEEEECTTCC
T ss_pred             CeEEEEecCCCC--cEEE-EeECCCCCCCeEEEEEEEeeccccceeeeeccc--ccccccccccCCEEEEEEEEeccccc
Confidence            899999988765  8888 999999999999999999999999999888743  33457899999999999999999999


Q ss_pred             CCCCCCEEEEecC------------------------CCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHH
Q 021831          109 SLTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR  164 (307)
Q Consensus       109 ~~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~  164 (307)
                      ++++||||.....                        +...+|+|+||+.++.++++++|++++++.|+ +. +..++++
T Consensus        76 ~~~vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~e~A~-l~-~~~~~~~  153 (171)
T d1rjwa1          76 HLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQP-LE-KINEVFD  153 (171)
T ss_dssp             SCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEECCTTCCEEEEE-GG-GHHHHHH
T ss_pred             CceeeeEEeeccccccccccccccCCCccccccccccceeccCccccceEecHHHEEECCCCCCHHHHH-HH-HHHHHHH
Confidence            9999999975321                        12356999999999999999999999986554 33 4566777


Q ss_pred             HHHHHcCCCCCCEEEEEcC
Q 021831          165 ALKCAARMSEGQRLLVLGG  183 (307)
Q Consensus       165 ~l~~~~~~~~g~~VlI~Ga  183 (307)
                      .+. ...+ +|++|||+|.
T Consensus       154 ~~~-~~~~-~G~tVlViG~  170 (171)
T d1rjwa1         154 RML-KGQI-NGRVVLTLED  170 (171)
T ss_dssp             HHH-TTCC-SSEEEEECCC
T ss_pred             HHH-hcCC-CCCEEEEeCC
Confidence            664 4555 5999999983

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.7e-27  Score=195.30  Aligned_cols=146  Identities=24%  Similarity=0.298  Sum_probs=123.0

Q ss_pred             ceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCC
Q 021831           28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV  107 (307)
Q Consensus        28 ~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v  107 (307)
                      .|++++++.   +++++++ +.++|+|+++||+|||.++|||++|++++++.........+|.++|||++|+|+++|+++
T Consensus         7 ~~~a~V~~g---p~~l~l~-evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v   82 (185)
T d1pl8a1           7 NNLSLVVHG---PGDLRLE-NYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSV   82 (185)
T ss_dssp             CCEEEEEEE---TTEEEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTC
T ss_pred             CCEEEEEeC---CCeEEEE-EeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccce
Confidence            578999994   4569999 999999999999999999999999999988754434456789999999999999999999


Q ss_pred             CCCCCCCEEEEecCC------------------------CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHH
Q 021831          108 RSLTVGQEVFGALHP------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAW  163 (307)
Q Consensus       108 ~~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~  163 (307)
                      ++|++||||+.....                        ...+|+|+||+.++.++++++|+++++++++..+  +.+++
T Consensus        83 ~~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~p--l~~a~  160 (185)
T d1pl8a1          83 KHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFP--LEKAL  160 (185)
T ss_dssp             CSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEEE--GGGHH
T ss_pred             eeecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHHHHHHHH--HHHHH
Confidence            999999999864321                        1356889999999999999999999999887664  33566


Q ss_pred             HHHHHHcCCCCCCEEEE
Q 021831          164 RALKCAARMSEGQRLLV  180 (307)
Q Consensus       164 ~~l~~~~~~~~g~~VlI  180 (307)
                      ++++ ..++++|++|||
T Consensus       161 ~a~~-~~~~~~G~~VlI  176 (185)
T d1pl8a1         161 EAFE-TFKKGLGLKIML  176 (185)
T ss_dssp             HHHH-HHHTTCCSEEEE
T ss_pred             HHHH-HhCCCCCCEEEE
Confidence            6664 567889999998

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.94  E-value=9.9e-27  Score=191.73  Aligned_cols=147  Identities=21%  Similarity=0.275  Sum_probs=122.9

Q ss_pred             ccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecC
Q 021831           26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (307)
Q Consensus        26 ~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~  105 (307)
                      +++|+|.++.+.+.+  |+++ +.+.|+|+++||+||+.++|||++|++++.|.    ....+|+++|||++|+|+++|+
T Consensus         1 ~k~~~Aav~~~~g~~--l~l~-~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~----~~~~~P~i~GHE~~G~V~~vG~   73 (194)
T d1f8fa1           1 LKDIIAAVTPCKGAD--FELQ-ALKIRQPQGDEVLVKVVATGMCHTDLIVRDQK----YPVPLPAVLGHEGSGIIEAIGP   73 (194)
T ss_dssp             CEEEEEEEBCSTTCC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHTTS----SCCCSSBCCCCEEEEEEEEECT
T ss_pred             CceeEEEEEcCCCCC--cEEE-EeeCCCCCCCEEEEEEEEEEecCchHhhhhhc----ccccCCcccccceEEEeeecCc
Confidence            467899999987655  8999 99999999999999999999999999999984    3456899999999999999999


Q ss_pred             CCCCCCCCCEEEEecCC-------------------------C--------------------CCCCcceeEEEecCCce
Q 021831          106 SVRSLTVGQEVFGALHP-------------------------T--------------------AVRGTYADYAVLSEDEL  140 (307)
Q Consensus       106 ~v~~~~~Gd~V~~~~~~-------------------------~--------------------~~~g~~~~~~~~~~~~~  140 (307)
                      ++++|++||||+.....                         .                    ...|+|+||..++..++
T Consensus        74 ~v~~~~vGDrVv~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~  153 (194)
T d1f8fa1          74 NVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNT  153 (194)
T ss_dssp             TCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGE
T ss_pred             cceeEccCceeeeecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHE
Confidence            99999999999653210                         0                    01368999999999999


Q ss_pred             eeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEE
Q 021831          141 TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSAT  205 (307)
Q Consensus       141 ~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~  205 (307)
                      +++|++++++++                         +++.| .|++|++++|+++.+|+ +|+++
T Consensus       154 ~~ip~~i~~~~~-------------------------~~i~g-~g~~g~~aiq~a~~~g~~~iiaV  193 (194)
T d1f8fa1         154 VKVTKDFPFDQL-------------------------VKFYA-FDEINQAAIDSRKGITLKPIIKI  193 (194)
T ss_dssp             EEECTTCCGGGG-------------------------EEEEE-GGGHHHHHHHHHHTSCSEEEEEC
T ss_pred             EECCCCCCcccE-------------------------EEEeC-cHHHHHHHHHHHHHcCCCEEEEe
Confidence            999998875433                         44555 69999999999999999 45543

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.94  E-value=6.6e-27  Score=180.44  Aligned_cols=131  Identities=29%  Similarity=0.373  Sum_probs=117.2

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||||+++++|++  ++++ +.+.|+|+++||+||+.++|||++|+...+|.+.  ....+|+++|||++|+|        
T Consensus         1 MkA~~~~~~G~~--l~~~-e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~--~~~~~P~v~G~E~~G~V--------   67 (131)
T d1iz0a1           1 MKAWVLKRLGGP--LELV-DLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYL--TRLHPPFIPGMEVVGVV--------   67 (131)
T ss_dssp             CEEEEECSTTSC--EEEE-ECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSS--SCCCSSBCCCCEEEEEE--------
T ss_pred             CcEEEEccCCCC--CEEE-EccCCCCCCCEEEEEEEEEecccccccccccccc--ccccceeEeeeeeEEee--------
Confidence            899999998876  8888 9999999999999999999999999999999542  23468999999999999        


Q ss_pred             CCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEE
Q 021831          109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVL  181 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~  181 (307)
                         +||+|++...    +|+|+||+.++.+.++++|+++++++++++.+++.|||+++.+.+  +.|++||++
T Consensus        68 ---vGd~V~~~~~----~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~~~g--~~g~tvl~l  131 (131)
T d1iz0a1          68 ---EGRRYAALVP----QGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALLDRG--HTGKVVVRL  131 (131)
T ss_dssp             ---TTEEEEEECS----SCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTTCTT--CCBEEEEEC
T ss_pred             ---ccceEEEEec----cCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHHhcc--cCCCEEEEC
Confidence               3999998875    599999999999999999999999999999999999999997555  469999873

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.94  E-value=6.7e-27  Score=190.77  Aligned_cols=145  Identities=25%  Similarity=0.346  Sum_probs=121.6

Q ss_pred             cccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEec
Q 021831           25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG  104 (307)
Q Consensus        25 ~~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G  104 (307)
                      |+++|||++++.++.+  ++++ +.+.|+|+++||+|||.++|||++|+++++|..   ....+|+++|||++|+|+++|
T Consensus         1 m~~k~kA~v~~~~~~p--l~i~-ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~---~~~~~P~vlGHE~~G~V~~vG   74 (184)
T d1vj0a1           1 MGLKAHAMVLEKFNQP--LVYK-EFEISDIPRGSILVEILSAGVCGSDVHMFRGED---PRVPLPIILGHEGAGRVVEVN   74 (184)
T ss_dssp             CCEEEEEEEBCSTTSC--CEEE-EEEECCCCTTCEEEEEEEEEECHHHHHHHTTCC---TTCCSSBCCCCEEEEEEEEES
T ss_pred             CCceEEEEEEecCCCC--cEEE-EeeCCCCCCCEEEEEEEEECCCCCchhheeccC---CccccccccceeeeeeeeEEe
Confidence            6788999999988766  8888 999999999999999999999999999999853   234689999999999999999


Q ss_pred             CCCC-----CCCCCCEEEEecCC--------------------------------CCCCCcceeEEEec-CCceeeCCCC
Q 021831          105 ASVR-----SLTVGQEVFGALHP--------------------------------TAVRGTYADYAVLS-EDELTPKPVS  146 (307)
Q Consensus       105 ~~v~-----~~~~Gd~V~~~~~~--------------------------------~~~~g~~~~~~~~~-~~~~~~ip~~  146 (307)
                      ++|+     .+++||+|+.....                                ...+|+|+||+.++ .++++++|++
T Consensus        75 ~~v~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~  154 (184)
T d1vj0a1          75 GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEK  154 (184)
T ss_dssp             SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTT
T ss_pred             ccccccccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECCCC
Confidence            9986     46899999864320                                02479999999996 5789999999


Q ss_pred             CChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEc
Q 021831          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLG  182 (307)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~G  182 (307)
                      +++++      ++.+|+++++ .+.+++|++|||+.
T Consensus       155 l~~~~------pl~~A~~a~~-~~~~~~G~~VlI~~  183 (184)
T d1vj0a1         155 ITHRL------PLKEANKALE-LMESREALKVILYP  183 (184)
T ss_dssp             CCEEE------EGGGHHHHHH-HHHHTSCSCEEEEC
T ss_pred             CCHHH------HHHHHHHHHH-HhCCCcCCEEEEee
Confidence            98653      3446777775 78899999999974

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.93  E-value=5.3e-26  Score=185.08  Aligned_cols=147  Identities=25%  Similarity=0.353  Sum_probs=119.8

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCcc-----ccCCCCCcccccceEEEEEEe
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRS-----IFEPLLPLILGRDISGEVAAV  103 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-----~~~~~~p~~~G~e~~G~V~~~  103 (307)
                      |||++++++|.+  ++++ +.+.|+|++|||+|||.++|||++|+++++|....     .....+|+++|||++|+|+++
T Consensus         1 MKA~~~~~~G~p--l~i~-dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~   77 (177)
T d1jvba1           1 MRAVRLVEIGKP--LSLQ-EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEV   77 (177)
T ss_dssp             CEEEEECSTTSC--CEEE-ECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEE
T ss_pred             CeEEEEEeCCCC--CEEE-EeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeee
Confidence            899999999877  8888 99999999999999999999999999999985322     123578999999999999999


Q ss_pred             cCCCCCCCCCCEEEEecCC-----------------------CCCCCcceeEEEecCCc-eeeCCCCCChhhhccccchH
Q 021831          104 GASVRSLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDE-LTPKPVSVTHADASAIPFAA  159 (307)
Q Consensus       104 G~~v~~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~-~~~ip~~~~~~~aa~~~~~~  159 (307)
                      |+++++|++||||+.....                       ...+|+|+||+.++... ++++|+..+.+.++....++
T Consensus        78 g~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~~~~~~~~~a~~~~~~~  157 (177)
T d1jvba1          78 GDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEA  157 (177)
T ss_dssp             CTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEECSSSCCCCEEEEEGGGH
T ss_pred             ccCccccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEECCCCChHHHHHHHHHHH
Confidence            9999999999999865421                       23569999999998655 56666655544444445688


Q ss_pred             HHHHHHHHHHcCCCCCCEEEE
Q 021831          160 LTAWRALKCAARMSEGQRLLV  180 (307)
Q Consensus       160 ~ta~~~l~~~~~~~~g~~VlI  180 (307)
                      .++++++. ..++ .|++|||
T Consensus       158 ~~a~~~~~-~~~~-~G~~VlI  176 (177)
T d1jvba1         158 NEAIDNLE-NFKA-IGRQVLI  176 (177)
T ss_dssp             HHHHHHHH-TTCC-CSEEEEE
T ss_pred             HHHHHHHH-hhcc-cCCceEC
Confidence            89999986 6665 5899987

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.93  E-value=8.3e-26  Score=187.12  Aligned_cols=147  Identities=22%  Similarity=0.324  Sum_probs=120.5

Q ss_pred             ccceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecC
Q 021831           26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA  105 (307)
Q Consensus        26 ~~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~  105 (307)
                      ..+|||+++++++.+  ++++ +.+.|+|+++||+|||.++|||++|+++++|.    .+..+|+++|||++|+|+++|+
T Consensus         6 ~~k~KAavl~~~~~~--l~i~-ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~----~~~~~P~i~GHE~~G~Vv~vG~   78 (198)
T d2jhfa1           6 VIKCKAAVLWEEKKP--FSIE-EVEVAPPKAHEVRIKMVATGICRSDDHVVSGT----LVTPLPVIAGHEAAGIVESIGE   78 (198)
T ss_dssp             CEEEEEEEBCSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHHTS----SCCCSSBCCCCSEEEEEEEECT
T ss_pred             ceEEEEEEEecCCCC--CEEE-EEECCCCCCCEEEEEEEEEecccccceeecCC----cccccceecccceeEEEEecCc
Confidence            357999999977655  8999 99999999999999999999999999999994    4457899999999999999999


Q ss_pred             CCCCCCCCCEEEEecCCC--------------------------------------------CCCCcceeEEEecCCcee
Q 021831          106 SVRSLTVGQEVFGALHPT--------------------------------------------AVRGTYADYAVLSEDELT  141 (307)
Q Consensus       106 ~v~~~~~Gd~V~~~~~~~--------------------------------------------~~~g~~~~~~~~~~~~~~  141 (307)
                      +++++++||||+......                                            ..+|+|+||++++..+++
T Consensus        79 ~v~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~  158 (198)
T d2jhfa1          79 GVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVA  158 (198)
T ss_dssp             TCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEE
T ss_pred             cccCcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeE
Confidence            999999999997643211                                            123899999999999999


Q ss_pred             eCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEc
Q 021831          142 PKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLG  182 (307)
Q Consensus       142 ~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~G  182 (307)
                      ++|+.++++.++....++.....+.   ..+++|++|+|+.
T Consensus       159 ~~p~~~~~e~l~~~~~~~~~v~~g~---~~l~~G~~VaVi~  196 (198)
T d2jhfa1         159 KIDAAFALDPLITHVLPFEKINEGF---DLLRSGESIRTIL  196 (198)
T ss_dssp             ECCTTSCCGGGEEEEEEGGGHHHHH---HHHHTTCCSEEEE
T ss_pred             ECCCCCCHHHHHHHHHHHHhhhhCC---ceeeCCCEEEEEE
Confidence            9999988877666555544333332   2457899998864

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.92  E-value=1.9e-27  Score=193.02  Aligned_cols=144  Identities=19%  Similarity=0.246  Sum_probs=114.0

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      ||+++++.+   ++++++ +.|.|+|+++||+||+.++|||++|++.+.+.   .....+|+++|||++|+|+++|++++
T Consensus         1 MKa~v~~~~---~~l~i~-e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~---~~~~~~P~i~GhE~~G~V~~vG~~v~   73 (177)
T d1jqba1           1 MKGFAMLGI---NKLGWI-EKERPVAGSYDAIVRPLAVSPCTSDIHTVFEG---ALGDRKNMILGHEAVGEVVEVGSEVK   73 (177)
T ss_dssp             CEEEEEEET---TEEEEE-ECCCCCCCTTCEEEEEEEECCCHHHHHHHHHC---TTCCCSSEECCCCEEEEEEEECTTCC
T ss_pred             CeEEEEEeC---CCeEEE-EeeCCCCCCCEEEEEEEEEecCCCcccccccC---CCCCCCCccCcceeeEEeeecccccc
Confidence            899999955   458999 99999999999999999999999999877542   23457799999999999999999999


Q ss_pred             CCCCCCEEEEecC--------------------------CCCCCCcceeEEEecC--CceeeCCCCCChhhhccccchHH
Q 021831          109 SLTVGQEVFGALH--------------------------PTAVRGTYADYAVLSE--DELTPKPVSVTHADASAIPFAAL  160 (307)
Q Consensus       109 ~~~~Gd~V~~~~~--------------------------~~~~~g~~~~~~~~~~--~~~~~ip~~~~~~~aa~~~~~~~  160 (307)
                      +|++||||+..+.                          ....+|+|+||+.+|.  .+++++|+++++++++...... 
T Consensus        74 ~~~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~~~~-  152 (177)
T d1jqba1          74 DFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHVYHG-  152 (177)
T ss_dssp             SCCTTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEEEEES-
T ss_pred             eecCCCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHHHHHH-
Confidence            9999999985432                          1125699999999986  3689999999998877665432 


Q ss_pred             HHHHHHHHHcCCCCCCEEEEEcCCchHHHHH
Q 021831          161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAA  191 (307)
Q Consensus       161 ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~  191 (307)
                        ++.+        ++.++++|+ |++|+.+
T Consensus       153 --~~~~--------~~~vlv~g~-gp~gl~a  172 (177)
T d1jqba1         153 --FDHI--------EEALLLMKD-KPKDLIK  172 (177)
T ss_dssp             --GGGH--------HHHHHHHHH-CCTTCSE
T ss_pred             --HHHh--------cCceEEECC-CHHHhhe
Confidence              2222        244667774 6666543

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=5.1e-25  Score=173.07  Aligned_cols=133  Identities=22%  Similarity=0.232  Sum_probs=114.6

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      |||++++.++++..++++ +.+.|+|++|||+|||.++|||++|+....|.+.  ....+|+++|+|++|+|+++|.+  
T Consensus         1 MkA~v~~~~~~~~~l~i~-~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~--~~~~~p~v~G~e~~G~V~~~~~~--   75 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQ-TLDESRLPEGDVTVDVHWSSLNYKDALAITGKGK--IIRNFPMIPGIDFAGTVRTSEDP--   75 (146)
T ss_dssp             CEEEEEECC---CEEEEE-ECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSS--CCCSSSBCCCSEEEEEEEEECST--
T ss_pred             CeEEEEEcCCCceEEEEE-EcCCCCCCCCEEEEEEeeccCccceeeEEEeecc--cccccceeccccccccceeeccC--
Confidence            899999999998899999 9999999999999999999999999999998532  23567899999999999997764  


Q ss_pred             CCCCCCEEEEecCCC--CCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHH
Q 021831          109 SLTVGQEVFGALHPT--AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL  166 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~~--~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l  166 (307)
                      .+++||+|+......  ..+|+|+||+.+|.+.++++|+++|+++||++++++.||+..+
T Consensus        76 ~~~~g~~v~~~~~~~g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~~~~  135 (146)
T d1o89a1          76 RFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAIIN  135 (146)
T ss_dssp             TCCTTCEEEEECTTBTTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHHHHT
T ss_pred             CccceeeEEeecccceecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence            799999998766432  3569999999999999999999999999999998888886554

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.92  E-value=4.6e-28  Score=200.67  Aligned_cols=158  Identities=22%  Similarity=0.257  Sum_probs=125.7

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCC-------CCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEE
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDL-------KPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVA  101 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~-------~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~  101 (307)
                      +||++++.++   .++++ |.+.|++       .++||+|||.++|||++|++++.|.    .+..+|+++|||++|+|+
T Consensus         2 ~kA~v~~~~~---~le~~-e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~----~~~~~P~v~GHE~~G~Vv   73 (201)
T d1kola1           2 NRGVVYLGSG---KVEVQ-KIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGR----TTAQVGLVLGHEITGEVI   73 (201)
T ss_dssp             EEEEEEEETT---EEEEE-EECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTC----SCCCTTCBCCCCEEEEEE
T ss_pred             cEEEEEeCCC---ceEEE-EecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCC----cccccceeccceeeeeee
Confidence            7999999654   58888 8888754       5699999999999999999999984    345689999999999999


Q ss_pred             EecCCCCCCCCCCEEEEecC---------------------------------CCCCCCcceeEEEecC--CceeeCCCC
Q 021831          102 AVGASVRSLTVGQEVFGALH---------------------------------PTAVRGTYADYAVLSE--DELTPKPVS  146 (307)
Q Consensus       102 ~~G~~v~~~~~Gd~V~~~~~---------------------------------~~~~~g~~~~~~~~~~--~~~~~ip~~  146 (307)
                      ++|++|++|++||||.....                                 ....+|+|+||+++|.  .+++++|++
T Consensus        74 ~vG~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~  153 (201)
T d1kola1          74 EKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDR  153 (201)
T ss_dssp             EECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCH
T ss_pred             ccccccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCCC
Confidence            99999999999999974321                                 0124689999999985  369999998


Q ss_pred             CChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC
Q 021831          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC  200 (307)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~  200 (307)
                      .++.+++.+..++.++++++. ....+.++    +| .|++|++++|+||.+||
T Consensus       154 ~~~~~~~~~~~~~~~~~~a~~-~~~~~~g~----~g-~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         154 DKAMEKINIAEVVGVQVISLD-DAPRGYGE----FD-AGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             HHHHHTCCHHHHHTEEEECGG-GHHHHHHH----HH-HTCSCEEEECTTCSSCC
T ss_pred             CChHHHHHHHHHHHHHHHHHH-hCCCCCeE----Ee-eCHHHHHHHHHHHHcCC
Confidence            777777776666666666654 33333443    46 59999999999998886

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.92  E-value=1.6e-27  Score=193.72  Aligned_cols=163  Identities=23%  Similarity=0.251  Sum_probs=132.6

Q ss_pred             ccceeEEEEcccCCCc-e--eEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCcccc-------CCCCCcccccc
Q 021831           26 TTSCRAVVLPRFGGPE-V--LEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF-------EPLLPLILGRD   95 (307)
Q Consensus        26 ~~~~ka~~~~~~~~~~-~--~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~-------~~~~p~~~G~e   95 (307)
                      |.+|||++++++|+|. .  ++.. +.+.|+|+++||+|||.+++||++|+++++|......       ....|.++|+|
T Consensus         1 m~t~kA~v~~~~G~p~~~l~l~~~-~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e   79 (175)
T d1gu7a1           1 MITAQAVLYTQHGEPKDVLFTQSF-EIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNE   79 (175)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEE-EECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSC
T ss_pred             CceeEEEEEccCCCcccccEEEEE-ECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCcccccc
Confidence            4589999999998873 3  4445 6777788999999999999999999999998542221       23577899999


Q ss_pred             eEEEEEEecCCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHH-HcCCCC
Q 021831           96 ISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKC-AARMSE  174 (307)
Q Consensus        96 ~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~-~~~~~~  174 (307)
                      ++|+|++.|.++..++.||+|.....   .+|+|+||+.++.++++++|++++...++  ....+|+|+++.. ...+++
T Consensus        80 ~~g~V~~~~~~~~~~~~g~~v~~~~~---~~g~~aey~~v~~~~~~~iP~~~~~~~a~--~~~~~ta~~~l~~~~~~~~~  154 (175)
T d1gu7a1          80 GLFEVIKVGSNVSSLEAGDWVIPSHV---NFGTWRTHALGNDDDFIKLPNPAQSKANG--KPNGLTDAKSIETLYDGTKP  154 (175)
T ss_dssp             CEEEEEEECTTCCSCCTTCEEEESSS---CCCCSBSEEEEEGGGEEEECCHHHHHHTT--CSCCCCCCCCEEEECCSSSC
T ss_pred             cccccccccccccccccccceecccc---ccccccceeeehhhhccCCCccchhhhhc--cchHHHHHHHHHHHhcCCCC
Confidence            99999999999999999999986544   34899999999999999999987644443  4567788888753 457899


Q ss_pred             CCEEEEEc-CCchHHHHHHHH
Q 021831          175 GQRLLVLG-GGGAVGFAAVQF  194 (307)
Q Consensus       175 g~~VlI~G-a~g~~G~~~~~~  194 (307)
                      |++|||+| |+|++|++++|+
T Consensus       155 g~~vli~gaa~~gvG~~~iQ~  175 (175)
T d1gu7a1         155 LHELYQDGVANSKDGKQLITY  175 (175)
T ss_dssp             HHHHHHHHHHTGGGSCEEEEC
T ss_pred             CCEEEEECccchhhhheEEeC
Confidence            99999998 558899887663

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.91  E-value=5.3e-27  Score=188.19  Aligned_cols=154  Identities=21%  Similarity=0.244  Sum_probs=131.6

Q ss_pred             cceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCC
Q 021831           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (307)
Q Consensus        27 ~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~  106 (307)
                      ++|||+++.++++...++++ +.+.|+|++|||+|||.++|||++|++.+.|...  .....|.++|+|++|+|++  +.
T Consensus         2 ~~~ka~~~~~~g~~~~l~~~-~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~--~~~~~~~~~g~e~~G~v~~--~~   76 (162)
T d1tt7a1           2 TLFQALQAEKNADDVSVHVK-TISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGN--IVREYPLILGIDAAGTVVS--SN   76 (162)
T ss_dssp             CEEEEEEECCGGGSCCCEEE-EEESSSSCSSSEEEEECCEEECHHHHHHTSTTCT--TCSSCSEECCSEEEEEEEE--CS
T ss_pred             CcEEEEEEEecCCCeEEEEE-EcCCCCCCCCEEEEEEEEecccchhhheeeeccc--ccccceeeeeeeccccccc--cc
Confidence            56999999999999999999 9999999999999999999999999998888532  2346788999999999998  56


Q ss_pred             CCCCCCCCEEEEecCC--CCCCCcceeEEEecCCceeeCCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCC
Q 021831          107 VRSLTVGQEVFGALHP--TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGG  184 (307)
Q Consensus       107 v~~~~~Gd~V~~~~~~--~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~  184 (307)
                      +.++++||+|+.....  ...+|+|+||+.+|.+.++++|+++++++|+.++..++|+|+.+. ......+++|||+|+.
T Consensus        77 ~~~~~~g~~v~~~~~~~g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~~~~-~~~~~~~~~Vli~ga~  155 (162)
T d1tt7a1          77 DPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDREVSL-EETPGALKDILQNRIQ  155 (162)
T ss_dssp             STTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEEEECS-TTHHHHHHHTTTTCCS
T ss_pred             ccccccceeeEeeeccceeccccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCc
Confidence            6789999999887643  345799999999999999999999999999999999999997654 2233445778888876


Q ss_pred             ch
Q 021831          185 GA  186 (307)
Q Consensus       185 g~  186 (307)
                      |.
T Consensus       156 G~  157 (162)
T d1tt7a1         156 GR  157 (162)
T ss_dssp             SE
T ss_pred             ce
Confidence            64

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.91  E-value=2.6e-25  Score=183.77  Aligned_cols=145  Identities=21%  Similarity=0.329  Sum_probs=119.5

Q ss_pred             cceeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCC
Q 021831           27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS  106 (307)
Q Consensus        27 ~~~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~  106 (307)
                      .||||++++.++.+  ++++ +++.|+|+++||+|||.++|||++|+++++|.    .+..+|+++|||++|+|+++|++
T Consensus         7 ~~~KAav~~~~g~~--l~i~-ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~----~~~~~P~i~GHE~~G~Vv~~G~~   79 (198)
T d1p0fa1           7 ITCKAAVAWEPHKP--LSLE-TITVAPPKAHEVRIKILASGICGSDSSVLKEI----IPSKFPVILGHEAVGVVESIGAG   79 (198)
T ss_dssp             EEEEEEEBSSTTSC--CEEE-EEEECCCCTTEEEEEEEEEECCHHHHHHHTTS----SCCCSSBCCCCCEEEEEEEECTT
T ss_pred             eEEEEEEEccCCCC--CEEE-EEECCCCCCCEEEEEEEEEEEecccceeeeec----cccccccccceeeeeeeeecCcc
Confidence            38999999977655  9999 99999999999999999999999999999984    34578999999999999999999


Q ss_pred             CCCCCCCCEEEEecCCC--------------------------------------------CCCCcceeEEEecCCceee
Q 021831          107 VRSLTVGQEVFGALHPT--------------------------------------------AVRGTYADYAVLSEDELTP  142 (307)
Q Consensus       107 v~~~~~Gd~V~~~~~~~--------------------------------------------~~~g~~~~~~~~~~~~~~~  142 (307)
                      ++++++||||+......                                            ..+++|+||+.+++..+++
T Consensus        80 v~~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~k  159 (198)
T d1p0fa1          80 VTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAK  159 (198)
T ss_dssp             CCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEE
T ss_pred             cccCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEE
Confidence            99999999998643210                                            0137899999999999999


Q ss_pred             CCCCCChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHH
Q 021831          143 KPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGF  189 (307)
Q Consensus       143 ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~  189 (307)
                      +|++++...++...+...+          +.++++|||.|+ |++|+
T Consensus       160 ip~~~~~~~~~~~~~~~~~----------v~~~~~vlv~G~-G~iGl  195 (198)
T d1p0fa1         160 IDPKINVNFLVSTKLTLDQ----------INKAFELLSSGQ-GVRSI  195 (198)
T ss_dssp             ECTTSCGGGGEEEEECGGG----------HHHHHHHTTTSS-CSEEE
T ss_pred             CCCCCCHHHHHHhhcchhh----------cCCCCEEEEECC-CcceE
Confidence            9999998877666544332          234455788884 77765

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=1.4e-23  Score=170.32  Aligned_cols=134  Identities=19%  Similarity=0.154  Sum_probs=109.1

Q ss_pred             eeEEEEcccCCCceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEEEecCCCC
Q 021831           29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR  108 (307)
Q Consensus        29 ~ka~~~~~~~~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~~G~~v~  108 (307)
                      |||++..+++++  |+++ |.+.|+|+++||+|||.++|||++|++.+.|..   ....+|+++|||++|+|+++|++|+
T Consensus         1 m~a~~~~~~~~p--l~i~-ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~---~~~~~P~i~GhE~~G~V~~vG~~V~   74 (179)
T d1uufa1           1 IKAVGAYSAKQP--LEPM-DITRREPGPNDVKIEIAYCGVCHSDLHQVRSEW---AGTVYPCVPGHEIVGRVVAVGDQVE   74 (179)
T ss_dssp             CEEEEBSSTTSC--CEEE-ECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTT---SCCCSSBCCCCCEEEEEEEECTTCC
T ss_pred             CeEEEEccCCCC--CEEE-EecCCCCCCCEEEEEEEEECCCCCcceeeeeee---ccccccccccccccccchhhccccc
Confidence            799999987766  9999 999999999999999999999999999999843   3357899999999999999999999


Q ss_pred             CCCCCCEEEEecCC--------------------------------CCCCCcceeEEEecCCceeeCCCCCChhhhcccc
Q 021831          109 SLTVGQEVFGALHP--------------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIP  156 (307)
Q Consensus       109 ~~~~Gd~V~~~~~~--------------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~  156 (307)
                      ++++||+|......                                ...+|+|+||+.++.++++++|+......   ..
T Consensus        75 ~~~vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~~~~---~a  151 (179)
T d1uufa1          75 KYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEMI---RA  151 (179)
T ss_dssp             SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCEEEE---CG
T ss_pred             cCCCCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCcChh---Hh
Confidence            99999999643210                                01358999999999999999996643222   22


Q ss_pred             chHHHHHHHHHHHcCC
Q 021831          157 FAALTAWRALKCAARM  172 (307)
Q Consensus       157 ~~~~ta~~~l~~~~~~  172 (307)
                      .++.++++++. .+.+
T Consensus       152 ~~l~~a~~a~~-~a~v  166 (179)
T d1uufa1         152 DQINEAYERML-RGDV  166 (179)
T ss_dssp             GGHHHHHHHHH-TTCS
T ss_pred             chhHHHHHHHH-HhCc
Confidence            35677888875 4554

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=6.8e-23  Score=166.00  Aligned_cols=124  Identities=27%  Similarity=0.399  Sum_probs=112.8

Q ss_pred             CChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeC
Q 021831          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDY  225 (307)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~  225 (307)
                      +|++++|+++++++|||+++.+..++++|++|||+|++|++|++++|+|+.+|++|+++++++ +.+.++++|+++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~vi~~   80 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNH   80 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCcccccccccccccccccccCccccccc
Confidence            588999999999999999998888999999999999999999999999999999999997665 4677899999999999


Q ss_pred             CChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          226 SSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       226 ~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ++.++.+.+.     .++|++||++|+. .++.++++++++|+++.+|...
T Consensus        81 ~~~~~~~~i~~~t~~~g~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~  130 (174)
T d1yb5a2          81 REVNYIDKIKKYVGEKGIDIIIEMLANV-NLSKDLSLLSHGGRVIVVGSRG  130 (174)
T ss_dssp             TSTTHHHHHHHHHCTTCEEEEEESCHHH-HHHHHHHHEEEEEEEEECCCCS
T ss_pred             ccccHHHHhhhhhccCCceEEeecccHH-HHHHHHhccCCCCEEEEEecCC
Confidence            9988877764     4799999999976 8999999999999999998654

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.87  E-value=3.1e-22  Score=161.60  Aligned_cols=122  Identities=33%  Similarity=0.451  Sum_probs=102.6

Q ss_pred             CChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeC
Q 021831          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDY  225 (307)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~  225 (307)
                      +++++||+++++++|||++++ .+++++||+|||+||+|++|++++|+|+.+|++|++++++ ++.+.++++|+++++++
T Consensus         1 ls~eeAA~l~~~~~TA~~al~-~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~i~~   79 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATY   79 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHH-HTTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEG
T ss_pred             CCHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccccccceeeeh
Confidence            578999999999999999997 5899999999999999999999999999999999998765 45677999999999998


Q ss_pred             CChhHHHHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          226 SSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       226 ~~~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .+........+++|+|||++|.  .+..++++++++|+++.+|...
T Consensus        80 ~~~~~~~~~~~g~D~v~d~~G~--~~~~~~~~l~~~G~~v~~G~~~  123 (171)
T d1iz0a2          80 AEVPERAKAWGGLDLVLEVRGK--EVEESLGLLAHGGRLVYIGAAE  123 (171)
T ss_dssp             GGHHHHHHHTTSEEEEEECSCT--THHHHHTTEEEEEEEEEC----
T ss_pred             hhhhhhhhccccccccccccch--hHHHHHHHHhcCCcEEEEeCCC
Confidence            6533222222589999999883  5789999999999999998654

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=3.1e-22  Score=162.73  Aligned_cols=125  Identities=26%  Similarity=0.413  Sum_probs=113.6

Q ss_pred             CChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeC
Q 021831          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDY  225 (307)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~  225 (307)
                      +|+++||+++++++|||+++.+..++++||+|||+||+|++|++++|+|+..|++|++++++ ++.+.++++|+++++|+
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~vi~~   80 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINY   80 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCeEEEEC
Confidence            57999999999999999999988899999999999999999999999999999999999665 45677999999999999


Q ss_pred             CChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          226 SSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       226 ~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      +++++.+.+.     .++|+++|++|+. .+..++.+++++|+++.+|....
T Consensus        81 ~~~d~~~~v~~~t~g~g~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~  131 (179)
T d1qora2          81 REEDLVERLKEITGGKKVRVVYDSVGRD-TWERSLDCLQRRGLMVSFGNSSG  131 (179)
T ss_dssp             TTSCHHHHHHHHTTTCCEEEEEECSCGG-GHHHHHHTEEEEEEEEECCCTTC
T ss_pred             CCCCHHHHHHHHhCCCCeEEEEeCccHH-HHHHHHHHHhcCCeeeecccccC
Confidence            9988887764     3799999999987 89999999999999999987654

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.87  E-value=1.8e-21  Score=156.61  Aligned_cols=149  Identities=23%  Similarity=0.272  Sum_probs=121.0

Q ss_pred             CChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CccHHHHHHcCCceEEeC
Q 021831          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSIDRVLAAGAEQAVDY  225 (307)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~  225 (307)
                      .++..+|.+.|+++|+|++++ ..++++|++|+|+|+ |++|++++|+|+.+|++++++.+ .++++.++++|+++++++
T Consensus         4 ~~~a~~Apl~Cag~Tay~al~-~~~~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad~~i~~   81 (168)
T d1uufa2           4 EQLAAVAPLLCAGITTYSPLR-HWQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNS   81 (168)
T ss_dssp             GGHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEET
T ss_pred             ccHHHHHHHHhHHHHHHHHHH-HhCCCCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhccCCcEEEEC
Confidence            456778888899999999996 799999999999995 99999999999999998877754 455678999999999999


Q ss_pred             CChhHHHHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc------------cccccccceechhHHHHHHHH
Q 021831          226 SSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA------------ALADHYGLALGLPIATTVLLK  293 (307)
Q Consensus       226 ~~~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------------~~~~~~~~~~~~~~~~~~~~~  293 (307)
                      .+.+......+++|++||++|+...+..++.+++++|+++.+|.+..            +.....+...+......++++
T Consensus        82 ~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs~~~~~~d~~e~l~  161 (168)
T d1uufa2          82 RNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLD  161 (168)
T ss_dssp             TCHHHHHTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHHHHHHHHH
T ss_pred             chhhHHHHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCCcccccHHHHHHCCcEEEEEeecCHHHHHHHHH
Confidence            98776665557899999999998789999999999999999997643            333455555666666555555


Q ss_pred             HHHh
Q 021831          294 KRMQ  297 (307)
Q Consensus       294 ~~~~  297 (307)
                      +..+
T Consensus       162 l~a~  165 (168)
T d1uufa2         162 FCAE  165 (168)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5443

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.86  E-value=1e-21  Score=158.60  Aligned_cols=124  Identities=25%  Similarity=0.267  Sum_probs=105.3

Q ss_pred             CChhhhccccchHHHHHHHHH---HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceE
Q 021831          147 VTHADASAIPFAALTAWRALK---CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQA  222 (307)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~---~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v  222 (307)
                      +|+++||+++.+++|||++++   +....++|++|||+||+|++|.+++|+|+..|++|++++++ ++.+.++++|++++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~v   80 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEV   80 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhccccee
Confidence            589999999999999997654   45778899999999999999999999999999999999765 56788999999999


Q ss_pred             EeCCChhHHHHhc----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          223 VDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       223 ~~~~~~~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      +++++.. .+...    +++|+|||++|+. .+..++.+|+++|+++.+|....
T Consensus        81 i~~~~~~-~~~~~~~~~~gvD~vid~vgg~-~~~~~l~~l~~~Griv~~G~~~g  132 (176)
T d1xa0a2          81 LAREDVM-AERIRPLDKQRWAAAVDPVGGR-TLATVLSRMRYGGAVAVSGLTGG  132 (176)
T ss_dssp             EECC----------CCSCCEEEEEECSTTT-THHHHHHTEEEEEEEEECSCCSS
T ss_pred             eecchhH-HHHHHHhhccCcCEEEEcCCch-hHHHHHHHhCCCceEEEeecccC
Confidence            9987543 22222    5899999999999 89999999999999999997643

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.85  E-value=9.9e-22  Score=160.23  Aligned_cols=121  Identities=30%  Similarity=0.446  Sum_probs=109.2

Q ss_pred             hhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeCCCh
Q 021831          150 ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDYSSK  228 (307)
Q Consensus       150 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~~~~  228 (307)
                      +|||+++++++|||+++.+.+++++|++|||+||+|++|++++|+|+.+|+++++++++ ++.+.++++|++++++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~vi~~~~~   80 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSV   80 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCS
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeecccccccccccccccccccCCcc
Confidence            47899999999999999888899999999999999999999999999999999988665 45677999999999999988


Q ss_pred             hHHHHhc-----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          229 DIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       229 ~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ++.+.+.     .++|++||++|+. .++.++++|+++|+++.+|...
T Consensus        81 ~~~~~v~~~t~~~g~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~G~~~  127 (183)
T d1pqwa_          81 DFADEILELTDGYGVDVVLNSLAGE-AIQRGVQILAPGGRFIELGKKD  127 (183)
T ss_dssp             THHHHHHHHTTTCCEEEEEECCCTH-HHHHHHHTEEEEEEEEECSCGG
T ss_pred             CHHHHHHHHhCCCCEEEEEecccch-HHHHHHHHhcCCCEEEEEccCC
Confidence            8877764     4899999999997 8899999999999999998553

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.85  E-value=6.1e-21  Score=153.72  Aligned_cols=148  Identities=22%  Similarity=0.302  Sum_probs=120.7

Q ss_pred             CChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCCceEEe
Q 021831          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGAEQAVD  224 (307)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~  224 (307)
                      +|+.+||.+++++.|||++++ ..++++|++|+|+|++|++|++++++++.+|+ +|+++..+ ++.+.++++|++++++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al~-~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~   79 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAVR-KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVIN   79 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeec
Confidence            578999999999999999996 78999999999999889999999999999997 88877654 5567799999999999


Q ss_pred             CCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc-----------cccccccceechhHHH
Q 021831          225 YSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA-----------ALADHYGLALGLPIAT  288 (307)
Q Consensus       225 ~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----------~~~~~~~~~~~~~~~~  288 (307)
                      +++.++.+.+.     +++|++|||+|+...++.++.+++++|+++.+|....           +.....|...+.....
T Consensus        80 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~Gs~~~~~~d~  159 (170)
T d1jvba2          80 ASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDF  159 (170)
T ss_dssp             TTTSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCCCCCHHHHHHHTCEEEECCSCCHHHH
T ss_pred             cCCcCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccCccccCHHHHHhCCcEEEEEecCCHHHH
Confidence            98877665544     4799999999998889999999999999999997653           3334444444444444


Q ss_pred             HHHHHHH
Q 021831          289 TVLLKKR  295 (307)
Q Consensus       289 ~~~~~~~  295 (307)
                      .+.++..
T Consensus       160 ~~~l~lv  166 (170)
T d1jvba2         160 LGIMRLA  166 (170)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            4444433

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.85  E-value=1.4e-20  Score=150.94  Aligned_cols=124  Identities=27%  Similarity=0.320  Sum_probs=110.3

Q ss_pred             CChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeC
Q 021831          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDY  225 (307)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~  225 (307)
                      +|++++|.++++++|||++++ .+++++|++|+|.|+ |++|++++|+++.+|++|+++.++ ++++.++++|+++++++
T Consensus         1 v~f~~aA~l~ca~~Ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGLK-QTNARPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHH-HHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhccCccccccc
Confidence            578999999999999999997 689999999999995 999999999999999999999765 45677999999999999


Q ss_pred             CChhHHHHhc---CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          226 SSKDIELAIK---GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       226 ~~~~~~~~~~---~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      +++++.+.+.   .++|.+++++++...+..++++++++|+++.+|.+..
T Consensus        79 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~  128 (166)
T d1llua2          79 RQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPG  128 (166)
T ss_dssp             TTSCHHHHHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSS
T ss_pred             cchhHHHHHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCC
Confidence            9887766654   5788888888888899999999999999999997654

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.85  E-value=5.8e-21  Score=154.33  Aligned_cols=123  Identities=20%  Similarity=0.279  Sum_probs=108.8

Q ss_pred             CChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCCceEEe
Q 021831          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGAEQAVD  224 (307)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~  224 (307)
                      +++++|+.++.++.|+|++++ .+++++|++|+|+|+ |++|++++|+++.+|+ +|+++..+ ++++.++++|++++++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~~-~a~~~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~   78 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGAE-LADIEMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILN   78 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHHH-HTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEEC
T ss_pred             CCHHHHHHhhhHHHHHHHHHH-HhCCCCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhhCcccccc
Confidence            468999999999999999986 799999999999995 9999999999999999 78888655 4567799999999999


Q ss_pred             CCChhHHHHhc-----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          225 YSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       225 ~~~~~~~~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ++++++.+.+.     .++|+||||+|+...+++++++++++|+++.+|.+.
T Consensus        79 ~~~~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~  130 (174)
T d1jqba2          79 YKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHG  130 (174)
T ss_dssp             GGGSCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCC
T ss_pred             ccchhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecC
Confidence            98877766554     379999999999878999999999999999999754

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.84  E-value=1.2e-20  Score=151.80  Aligned_cols=149  Identities=17%  Similarity=0.174  Sum_probs=118.6

Q ss_pred             ChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CccHHHHHHcCCceEEeCC
Q 021831          148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSIDRVLAAGAEQAVDYS  226 (307)
Q Consensus       148 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~  226 (307)
                      +.+.||.+.+++.|+|++++ ..++++|++|+|+|+ |++|++++|+++.+|++|+++++ .++.+.++++|+++++++.
T Consensus         2 p~e~AApl~cag~Ta~~al~-~~~~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~~i~~~   79 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPLV-RNGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATL   79 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHHH-HTTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGG
T ss_pred             CHHHHHHHHHHHHHHHHHHH-HhCcCCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhccCCcEEeecc
Confidence            45678899999999999997 789999999999996 99999999999999999998865 4567889999999999976


Q ss_pred             Ch-hHHHHhcCCccEEEECCCChh--hHHHHHhcccCCcEEEEeccCcc-----------cccccccceechhHHHHHHH
Q 021831          227 SK-DIELAIKGKFDAVLDTIGAPE--TERLGLNFLKRGGHYMTLHGETA-----------ALADHYGLALGLPIATTVLL  292 (307)
Q Consensus       227 ~~-~~~~~~~~~~dvvid~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~-----------~~~~~~~~~~~~~~~~~~~~  292 (307)
                      ++ ++.+...+++|+++||+++..  .+..++++++++|+++.+|.+..           +.....|...+......+++
T Consensus        80 ~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~g~~~~~~e~l  159 (168)
T d1piwa2          80 EEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLL  159 (168)
T ss_dssp             GTSCHHHHSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSCCEEECGGGCBSCEEEECCCCCHHHHHHHH
T ss_pred             chHHHHHhhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccccccccHHHHHhCCcEEEEEeeCCHHHHHHHH
Confidence            53 566666678999999988653  46789999999999999997654           33344555555555555555


Q ss_pred             HHHHhh
Q 021831          293 KKRMQT  298 (307)
Q Consensus       293 ~~~~~~  298 (307)
                      ++...+
T Consensus       160 ~li~~g  165 (168)
T d1piwa2         160 KLVSEK  165 (168)
T ss_dssp             HHHHHT
T ss_pred             HHHHhC
Confidence            544433

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.84  E-value=1.2e-20  Score=153.71  Aligned_cols=117  Identities=24%  Similarity=0.314  Sum_probs=104.2

Q ss_pred             ccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHH
Q 021831          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIE  231 (307)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~  231 (307)
                      +++.++++|||+++.+..++++||+|||+||+|++|++++|+++..|++|+++++++ +.+.++++|++++++++++++.
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~   87 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSL   87 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCH
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHH
Confidence            567789999999999999999999999999999999999999999999999997665 5677999999999999887655


Q ss_pred             HHhc-----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          232 LAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       232 ~~~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      +.+.     +++|+|||++|++ .++.++++++++|+++.+|..
T Consensus        88 ~~~~~~~~~~Gvd~v~D~vG~~-~~~~~~~~l~~~G~~v~~G~~  130 (182)
T d1v3va2          88 EEALKKASPDGYDCYFDNVGGE-FLNTVLSQMKDFGKIAICGAI  130 (182)
T ss_dssp             HHHHHHHCTTCEEEEEESSCHH-HHHHHGGGEEEEEEEEECCCG
T ss_pred             HHHHHHhhcCCCceeEEecCch-hhhhhhhhccCCCeEEeecce
Confidence            4432     4899999999977 899999999999999999953

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.84  E-value=1.6e-20  Score=152.99  Aligned_cols=123  Identities=20%  Similarity=0.298  Sum_probs=105.7

Q ss_pred             ChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCCceEEeC
Q 021831          148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGAEQAVDY  225 (307)
Q Consensus       148 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~  225 (307)
                      ++..+|.+.++++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++.++ ++++.++++|+++++++
T Consensus         2 d~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~   80 (182)
T d1vj0a2           2 DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNR   80 (182)
T ss_dssp             CHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             cHHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECC-CccchhheecccccccccccccccccccccccccccceEEEec
Confidence            346678888999999999987889999999999996 9999999999999999 88888654 55678999999999999


Q ss_pred             CChhHHHH---hc-----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          226 SSKDIELA---IK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       226 ~~~~~~~~---~~-----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .+.+..+.   +.     .++|+||||+|++..+..++++++++|+++.+|...
T Consensus        81 ~~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~  134 (182)
T d1vj0a2          81 RETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAV  134 (182)
T ss_dssp             TTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCS
T ss_pred             cccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecC
Confidence            87654332   22     379999999999878999999999999999999653

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.83  E-value=7.4e-20  Score=147.84  Aligned_cols=123  Identities=20%  Similarity=0.256  Sum_probs=107.4

Q ss_pred             ChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEE-EEEeCC-ccHHHHHHcCCceEEeC
Q 021831          148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHV-SATCGS-KSIDRVLAAGAEQAVDY  225 (307)
Q Consensus       148 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~V-i~~~~~-~~~~~~~~~g~~~v~~~  225 (307)
                      +++.++.+++++.|||+++.+..++++|++|+|+|+ |++|++++|+++.+|+++ +++..+ ++++.++++|+++++++
T Consensus         2 P~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~   80 (174)
T d1f8fa2           2 PIELLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS   80 (174)
T ss_dssp             CGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred             CHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence            467889999999999999888899999999999996 999999999999999954 454443 45677899999999999


Q ss_pred             CChhHHHHhc----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          226 SSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       226 ~~~~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +++++.+.+.    +++|+||||+|+...+..++++++++|+++.+|.+.
T Consensus        81 ~~~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~  130 (174)
T d1f8fa2          81 KTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQ  130 (174)
T ss_dssp             TTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCS
T ss_pred             CCcCHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecC
Confidence            9888777654    589999999999888999999999999999999653

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.83  E-value=2.1e-20  Score=152.92  Aligned_cols=122  Identities=22%  Similarity=0.365  Sum_probs=101.2

Q ss_pred             CChhhhccccchHHHHHHHHHHHcCCCCC--CEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCcc-H-HHHHHcCCce
Q 021831          147 VTHADASAIPFAALTAWRALKCAARMSEG--QRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-I-DRVLAAGAEQ  221 (307)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g--~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~-~-~~~~~~g~~~  221 (307)
                      +|+.+.+ ++++++|||+++.+..++++|  ++|||+||+|++|++++|+|+.+|+ +|++++++++ . ...+++|+++
T Consensus         2 ~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~   80 (187)
T d1vj1a2           2 LSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA   80 (187)
T ss_dssp             GGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE
T ss_pred             ccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE
Confidence            3445543 667899999999989999988  8899999999999999999999999 5665555543 3 3467899999


Q ss_pred             EEeCCChhHHHHhc----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          222 AVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       222 v~~~~~~~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ++|+.++++.+.+.    .++|+|||++|+. .+..++++++++|+++.+|..
T Consensus        81 vi~~~~~~~~~~~~~~~~~GvDvv~D~vGg~-~~~~~~~~l~~~G~iv~~G~~  132 (187)
T d1vj1a2          81 AVNYKTGNVAEQLREACPGGVDVYFDNVGGD-ISNTVISQMNENSHIILCGQI  132 (187)
T ss_dssp             EEETTSSCHHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEEEEEEEC---
T ss_pred             EeeccchhHHHHHHHHhccCceEEEecCCch-hHHHHhhhccccccEEEeccc
Confidence            99999988877665    4899999999987 889999999999999999963

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.83  E-value=8.8e-20  Score=147.13  Aligned_cols=148  Identities=21%  Similarity=0.246  Sum_probs=119.0

Q ss_pred             hhhhccccchHHHHHHHHHHHc-CCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCCceEEeC
Q 021831          149 HADASAIPFAALTAWRALKCAA-RMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGAEQAVDY  225 (307)
Q Consensus       149 ~~~aa~~~~~~~ta~~~l~~~~-~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~  225 (307)
                      +.++|.++++++|||+++.+.. .+++|++|+|.|+ |++|++++|+++.+|+ +|+++.++ ++++.++++|+++++++
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~   84 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDA   84 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEET
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecC
Confidence            5788999999999999998655 5799999999995 9999999999999998 66666554 45677899999999999


Q ss_pred             CChhHHHHhc----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc----------cccccccceechhHHHHHH
Q 021831          226 SSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA----------ALADHYGLALGLPIATTVL  291 (307)
Q Consensus       226 ~~~~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----------~~~~~~~~~~~~~~~~~~~  291 (307)
                      +++++.+...    .++|+|||++|+...++.++++++++|+++++|....          +.....|...+......++
T Consensus        85 ~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~l~~k~~~i~Gs~~~~~~d~~~~  164 (172)
T d1h2ba2          85 RRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGGELRFPTIRVISSEVSFEGSLVGNYVELHEL  164 (172)
T ss_dssp             TSCHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSSCCCCCHHHHHHTTCEEEECCSCCHHHHHHH
T ss_pred             cccHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcccccCCHHHHHhCCcEEEEEEecCHHHHHHH
Confidence            8766544443    4799999999998789999999999999999997543          3445566666666665555


Q ss_pred             HHHHHh
Q 021831          292 LKKRMQ  297 (307)
Q Consensus       292 ~~~~~~  297 (307)
                      ++....
T Consensus       165 l~l~~~  170 (172)
T d1h2ba2         165 VTLALQ  170 (172)
T ss_dssp             HHHHHT
T ss_pred             HHHHHc
Confidence            555443

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.82  E-value=1.4e-20  Score=154.15  Aligned_cols=124  Identities=21%  Similarity=0.296  Sum_probs=104.4

Q ss_pred             CChhhhccccchHHHHHHHHHHHcCCCCCCEEEEE-cCCchHHHHHHHHHHHcCCEEEEEeCCc-c----HHHHHHcCCc
Q 021831          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVL-GGGGAVGFAAVQFSVASGCHVSATCGSK-S----IDRVLAAGAE  220 (307)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~-Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~----~~~~~~~g~~  220 (307)
                      +|+++||+++++++|||+++.+..++++|++|+|+ ||+|++|++++|+||.+|++||+++++. +    .+.++++|++
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad   80 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT   80 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc
Confidence            57899999999999999999988999999988886 7789999999999999999999987543 2    2347899999


Q ss_pred             eEEeCCChh---HHHHh----c---CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          221 QAVDYSSKD---IELAI----K---GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       221 ~v~~~~~~~---~~~~~----~---~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +++++++.+   +.+.+    .   +++|++||++|++ ....++++|+++|+++.+|...
T Consensus        81 ~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~-~~~~~~~~l~~~G~~v~~G~~~  140 (189)
T d1gu7a2          81 QVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGK-SSTGIARKLNNNGLMLTYGGMS  140 (189)
T ss_dssp             EEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHH-HHHHHHHTSCTTCEEEECCCCS
T ss_pred             EEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcc-hhhhhhhhhcCCcEEEEECCcc
Confidence            999876432   22222    1   4799999999988 7899999999999999999653

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.82  E-value=9.2e-20  Score=147.10  Aligned_cols=124  Identities=19%  Similarity=0.249  Sum_probs=105.4

Q ss_pred             ChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeC-CccHHHHHHcCCceEEeC
Q 021831          148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCG-SKSIDRVLAAGAEQAVDY  225 (307)
Q Consensus       148 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~-~~~~~~~~~~g~~~v~~~  225 (307)
                      +++++|.+.|.+.|+|+++.+.+++++||+|+|+|+ |++|++++|+++.+|+ +|+++.. .++++.++++|+++++++
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~   80 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNP   80 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCC
Confidence            467899999999999999887899999999999995 9999999999999999 6777744 456778999999999986


Q ss_pred             CCh--hHHHHh---c-CCccEEEECCCChhhHHHHHhcccCC-cEEEEeccCcc
Q 021831          226 SSK--DIELAI---K-GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGETA  272 (307)
Q Consensus       226 ~~~--~~~~~~---~-~~~dvvid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~  272 (307)
                      ...  ......   . +++|++|||+|++..++.++++++++ |+++.+|.+..
T Consensus        81 ~~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~  134 (174)
T d1e3ia2          81 RELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD  134 (174)
T ss_dssp             GGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSS
T ss_pred             ccchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCC
Confidence            542  222222   2 58999999999998999999999996 99999998754

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.82  E-value=1.5e-19  Score=145.01  Aligned_cols=150  Identities=22%  Similarity=0.256  Sum_probs=121.3

Q ss_pred             CChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CccHHHHHHcCCceEEeC
Q 021831          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSIDRVLAAGAEQAVDY  225 (307)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~  225 (307)
                      +|+++||+++++++|||++++ ..++++|++|||+|+ |++|++++++++..|++|+++.. .++++.++++|+++++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al~-~~~~~~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKALK-VTGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHH-HHTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcceeccc
Confidence            578999999999999999997 789999999999985 99999999999999999988865 456677999999999999


Q ss_pred             CChhHHHHhc---CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc-----------cccccccceechhHHHHHH
Q 021831          226 SSKDIELAIK---GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA-----------ALADHYGLALGLPIATTVL  291 (307)
Q Consensus       226 ~~~~~~~~~~---~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----------~~~~~~~~~~~~~~~~~~~  291 (307)
                      .+.++.+.+.   .++|.+++++++...+..++++++++|+++.+|.+..           +.....+...+......+.
T Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~  158 (168)
T d1rjwa2          79 LKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEA  158 (168)
T ss_dssp             TTSCHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHH
T ss_pred             ccchhhhhcccccCCCceEEeecCCHHHHHHHHHHhccCCceEecccccCCCCCCHHHHHHCCcEEEEEeeCCHHHHHHH
Confidence            9887766554   5677777777877789999999999999999998764           3334455555555555555


Q ss_pred             HHHHHhh
Q 021831          292 LKKRMQT  298 (307)
Q Consensus       292 ~~~~~~~  298 (307)
                      ++.+..+
T Consensus       159 l~l~~~G  165 (168)
T d1rjwa2         159 LQFAAEG  165 (168)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHhC
Confidence            5444433

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.81  E-value=3e-19  Score=144.13  Aligned_cols=122  Identities=22%  Similarity=0.250  Sum_probs=103.9

Q ss_pred             hhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeC-CccHHHHHHcCCceEEeCC
Q 021831          149 HADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCG-SKSIDRVLAAGAEQAVDYS  226 (307)
Q Consensus       149 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~-~~~~~~~~~~g~~~v~~~~  226 (307)
                      |.++|.+.|++.|+|+++.+.+++++||+|+|+|+ |++|++++|+++.+|+ +|+++.. .++++.++++|+++++|++
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~   80 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPK   80 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCC
Confidence            56799999999999999887899999999999995 9999999999999998 7888855 4567889999999999976


Q ss_pred             Chh--HHHHhc----CCccEEEECCCChhhHHHHHhcccC-CcEEEEeccCc
Q 021831          227 SKD--IELAIK----GKFDAVLDTIGAPETERLGLNFLKR-GGHYMTLHGET  271 (307)
Q Consensus       227 ~~~--~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~-~G~~v~~g~~~  271 (307)
                      +.+  ..+...    +++|++||++|+...+..++..+++ +|+++.+|.+.
T Consensus        81 ~~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~  132 (174)
T d1p0fa2          81 DYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLAS  132 (174)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCC
T ss_pred             CchhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEec
Confidence            543  232222    5899999999999888889888876 59999999764

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.80  E-value=5.3e-19  Score=142.89  Aligned_cols=123  Identities=20%  Similarity=0.248  Sum_probs=103.5

Q ss_pred             ChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCCceEEeC
Q 021831          148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGAEQAVDY  225 (307)
Q Consensus       148 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~  225 (307)
                      ++++||.+.+++.|+|+++.+.+++++||+|||+|+ |++|++++|+++.+|+ +|+++.++ ++++.++++|+++++++
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~   80 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINP   80 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeC
Confidence            468899999999999999987899999999999996 7899999999999998 67777554 45677999999999988


Q ss_pred             CC--hhHHHHhc----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          226 SS--KDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       226 ~~--~~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .+  ++..+.+.    +++|++||++|+......+..+++++|+++.+++..
T Consensus        81 ~~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~  132 (176)
T d2fzwa2          81 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVA  132 (176)
T ss_dssp             GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred             CchhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeec
Confidence            64  23333332    589999999999878899999999998888776543

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.79  E-value=6.9e-19  Score=142.21  Aligned_cols=124  Identities=15%  Similarity=0.192  Sum_probs=105.5

Q ss_pred             ChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeC-CccHHHHHHcCCceEEeC
Q 021831          148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCG-SKSIDRVLAAGAEQAVDY  225 (307)
Q Consensus       148 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~-~~~~~~~~~~g~~~v~~~  225 (307)
                      ++++++.+.|++.|+|+++.+.+++++||+|+|+|+ |++|++++|+++.+|+ +|+++.. .++++.++++|+++++|+
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~   81 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISP   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECc
Confidence            478999999999999999987889999999999995 9999999999999997 8999954 567788999999999997


Q ss_pred             CChhH-HHHh----c-CCccEEEECCCChhhHHHHHhcccCC-cEEEEeccCcc
Q 021831          226 SSKDI-ELAI----K-GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGETA  272 (307)
Q Consensus       226 ~~~~~-~~~~----~-~~~dvvid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~  272 (307)
                      .+.+. .+.+    . +++|++||++|....+..++..+.++ |+++.+|.+..
T Consensus        82 ~~~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~  135 (176)
T d1d1ta2          82 KDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPS  135 (176)
T ss_dssp             GGCSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCT
T ss_pred             cccchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEcccc
Confidence            76432 2221    1 58999999999997888888877665 99999997753

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.1e-18  Score=140.45  Aligned_cols=123  Identities=20%  Similarity=0.290  Sum_probs=105.4

Q ss_pred             CChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCCceEEe
Q 021831          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGAEQAVD  224 (307)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~  224 (307)
                      +|+++||.+ .++.+||++++ .+++++||+|+|+|+ |++|++++++++.+|+ +|+++... ++++.++++|++++++
T Consensus         1 vS~e~Aal~-epla~a~~a~~-~~~~~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~   77 (171)
T d1pl8a2           1 VTFEEGALI-EPLSVGIHACR-RGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQ   77 (171)
T ss_dssp             SCHHHHHHH-HHHHHHHHHHH-HHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHH-HHHHHHHHHHH-HhCCCCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCccccc
Confidence            467888866 47889999986 789999999999995 9999999999999999 78888554 5567799999999999


Q ss_pred             CCChhHHHHhc-------CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          225 YSSKDIELAIK-------GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       225 ~~~~~~~~~~~-------~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      +...+..+...       .++|++|||+|+...++.++++++++|+++.+|.+..
T Consensus        78 ~~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~  132 (171)
T d1pl8a2          78 ISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSE  132 (171)
T ss_dssp             CSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCS
T ss_pred             ccccccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCC
Confidence            88765443322       4899999999999889999999999999999998754

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=7e-20  Score=147.98  Aligned_cols=125  Identities=20%  Similarity=0.215  Sum_probs=106.7

Q ss_pred             CChhhhccccchHHHHHHHHH---HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceE
Q 021831          147 VTHADASAIPFAALTAWRALK---CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQA  222 (307)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~---~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v  222 (307)
                      +|+.+++.++++++|||+++.   +....+++++|||+||+|++|++++|+||.+|++|+++++++ +.+.++++|++++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGad~v   80 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRV   80 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTEEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhccccc
Confidence            578999999999999998764   233445567999999999999999999999999999987764 5667999999999


Q ss_pred             EeCCChhHHHHhc-CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          223 VDYSSKDIELAIK-GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       223 ~~~~~~~~~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      +++++.++.+.+. ..+|.++|++|+. .+...+.+++++|+++.+|....
T Consensus        81 i~~~~~~~~~~l~~~~~~~vvD~Vgg~-~~~~~l~~l~~~Griv~~G~~~~  130 (177)
T d1o89a2          81 LPRDEFAESRPLEKQVWAGAIDTVGDK-VLAKVLAQMNYGGCVAACGLAGG  130 (177)
T ss_dssp             EEGGGSSSCCSSCCCCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTC
T ss_pred             cccccHHHHHHHHhhcCCeeEEEcchH-HHHHHHHHhccccceEeecccCC
Confidence            9998766655554 4689999999998 88999999999999999997654

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.77  E-value=4.5e-18  Score=136.59  Aligned_cols=123  Identities=21%  Similarity=0.325  Sum_probs=102.6

Q ss_pred             CChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEEeC
Q 021831          147 VTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAVDY  225 (307)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~~~  225 (307)
                      +|+++||.+ .++.+||++++ ..++++|++|+|+| +|++|++++|+++.+|++|+++.++ ++++.++++|++..+..
T Consensus         1 VS~e~Aal~-ePla~a~~a~~-~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~   77 (170)
T d1e3ja2           1 VSLEEGALL-EPLSVGVHACR-RAGVQLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVV   77 (170)
T ss_dssp             SCHHHHHTH-HHHHHHHHHHH-HHTCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHH-HHHHHHHHHHH-HhCCCCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEec
Confidence            467888876 47889999996 78999999999998 5999999999999999999999665 55677999999887765


Q ss_pred             CC--h---hHHHHhc----CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          226 SS--K---DIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       226 ~~--~---~~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      +.  .   +..+.+.    +++|+||||+|+...++.++++++++|+++.+|.+..
T Consensus        78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~  133 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ  133 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS
T ss_pred             cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCC
Confidence            43  2   2223333    4799999999998789999999999999999998754

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.76  E-value=1.2e-17  Score=134.94  Aligned_cols=122  Identities=17%  Similarity=0.206  Sum_probs=100.3

Q ss_pred             ChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeC-CccHHHHHHcCCceEEeC
Q 021831          148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCG-SKSIDRVLAAGAEQAVDY  225 (307)
Q Consensus       148 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~-~~~~~~~~~~g~~~v~~~  225 (307)
                      ++++||.++|++.|+|+++.+.+++++||+|||+|+ |++|++++++++.+|+ +|+++.+ .++++.++++|+++++++
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~   80 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP   80 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEec
Confidence            467899999999999999988899999999999997 8899999999999997 8888865 456777999999999987


Q ss_pred             CCh-h-HHHHhc----CCccEEEECCCChhhHHHHHhcccCCc-EEEEeccC
Q 021831          226 SSK-D-IELAIK----GKFDAVLDTIGAPETERLGLNFLKRGG-HYMTLHGE  270 (307)
Q Consensus       226 ~~~-~-~~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~G-~~v~~g~~  270 (307)
                      .+. + ..+...    +++|++||++|.......++..++++| .++..+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~  132 (176)
T d2jhfa2          81 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVP  132 (176)
T ss_dssp             GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCC
T ss_pred             CCchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCC
Confidence            542 2 222222    589999999999988899999998875 55555443

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.75  E-value=2.5e-17  Score=132.74  Aligned_cols=123  Identities=20%  Similarity=0.209  Sum_probs=100.3

Q ss_pred             ChhhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCCceEEeC
Q 021831          148 THADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGAEQAVDY  225 (307)
Q Consensus       148 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~  225 (307)
                      ++++||.+.|++.|+|+++.+.+++++||+|+|+|+ |++|+.++++++..|+ +|+++.+. ++++.++++|+++++|+
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~   80 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNP   80 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcC
Confidence            468899999999999999987899999999999995 8899999999999988 78888655 46788999999999998


Q ss_pred             CChh-H-HHHhc----CCccEEEECCCChhhHHHHHhcccCCcEEEE-eccCc
Q 021831          226 SSKD-I-ELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMT-LHGET  271 (307)
Q Consensus       226 ~~~~-~-~~~~~----~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~-~g~~~  271 (307)
                      .+++ + .+...    +++|++||++|+......++.+++++|.++. .|.+.
T Consensus        81 ~~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~  133 (175)
T d1cdoa2          81 NDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTD  133 (175)
T ss_dssp             GGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCS
T ss_pred             CCcchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecC
Confidence            7543 2 22222    5899999999998788999998887755544 54443

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.73  E-value=2.9e-18  Score=137.08  Aligned_cols=114  Identities=22%  Similarity=0.224  Sum_probs=92.8

Q ss_pred             hHHHHHHH---HHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHH
Q 021831          158 AALTAWRA---LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELA  233 (307)
Q Consensus       158 ~~~ta~~~---l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~  233 (307)
                      +++|||.+   +.+....+++++|||+||+|++|++++|+|+.+|++|+++++++ +.+.++++|+++++++++......
T Consensus         4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~vi~~~~~~~~~~   83 (167)
T d1tt7a2           4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTL   83 (167)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCC
T ss_pred             hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcccceEeccchhchhh
Confidence            45677654   44455667788999999999999999999999999999998764 567899999999998753221111


Q ss_pred             hc---CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          234 IK---GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       234 ~~---~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      ..   +++|+|||++|+. .+..++++|+++|+++.+|....
T Consensus        84 ~~~~~~gvd~vid~vgg~-~~~~~~~~l~~~G~iv~~G~~~g  124 (167)
T d1tt7a2          84 KALSKQQWQGAVDPVGGK-QLASLLSKIQYGGSVAVSGLTGG  124 (167)
T ss_dssp             CSSCCCCEEEEEESCCTH-HHHHHHTTEEEEEEEEECCCSSC
T ss_pred             hcccCCCceEEEecCcHH-HHHHHHHHhccCceEEEeeccCC
Confidence            11   5899999999999 88999999999999999997654

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.72  E-value=9.4e-17  Score=125.03  Aligned_cols=136  Identities=15%  Similarity=0.216  Sum_probs=104.7

Q ss_pred             ccceeEEEEccc--CCC--ceeEEcCcccCCCCCCCeEEEEEeeeecChhhHHHHhCCCccccCCCCCcccccceEEEEE
Q 021831           26 TTSCRAVVLPRF--GGP--EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVA  101 (307)
Q Consensus        26 ~~~~ka~~~~~~--~~~--~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~  101 (307)
                      |.+.|+|++.++  |.|  +.|+++ +.++|+|++|||+||+++.++++.....+..    .   ...-++..+++|+|+
T Consensus         1 M~~~k~~vl~~~P~G~P~~~~f~l~-e~~ip~~~~gevLvk~~~~svDp~~R~~~~~----~---~~g~~~~g~~vg~Vv   72 (147)
T d1v3va1           1 MVKAKSWTLKKHFQGKPTQSDFELK-TVELPPLKNGEVLLEALFLSVDPYMRIASKR----L---KEGAVMMGQQVARVV   72 (147)
T ss_dssp             CCEEEEEEESSCCCSSCCGGGEEEE-EEECCCCCTTCEEEEEEEEECCTHHHHHGGG----S---CTTSBCCCCEEEEEE
T ss_pred             CcccEEEEEccCCCCCCcccceEEE-EEECCCCCCCEEEEEEEEEeEcccccccccc----c---ccCCccccceEEEEE
Confidence            356899999987  544  579999 9999999999999999999999976654332    1   222345668899998


Q ss_pred             EecCCCCCCCCCCEEEEecCCCCCCCcceeEEEecCCceeeCCCCCCh-----hhhccccchHHHHHH-HHHHHcCCCCC
Q 021831          102 AVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTH-----ADASAIPFAALTAWR-ALKCAARMSEG  175 (307)
Q Consensus       102 ~~G~~v~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~-----~~aa~~~~~~~ta~~-~l~~~~~~~~g  175 (307)
                      +  |++++|++||+|++.       ++|+||++.+.+.+.++|...+.     ...+++...++|||+ .+.  ...+.|
T Consensus        73 ~--S~~~~f~~GD~V~g~-------~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~--~~~k~G  141 (147)
T d1v3va1          73 E--SKNSAFPAGSIVLAQ-------SGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEML--NGANLG  141 (147)
T ss_dssp             E--ESCTTSCTTCEEEEC-------CCSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHHHHHH--TTCCSS
T ss_pred             E--eCCCcccCCCEEEEc-------cCCEeEEEeccceeeEccccccccccchhhhHhccccchHHHHHHhh--CCCCCC
Confidence            8  677899999999876       88999999999999999876433     234566677787544 553  445679


Q ss_pred             CEEEE
Q 021831          176 QRLLV  180 (307)
Q Consensus       176 ~~VlI  180 (307)
                      ++||+
T Consensus       142 etvv~  146 (147)
T d1v3va1         142 KAVVT  146 (147)
T ss_dssp             EEEEE
T ss_pred             CEEEe
Confidence            99987

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.71  E-value=3.9e-17  Score=133.90  Aligned_cols=120  Identities=18%  Similarity=0.144  Sum_probs=103.4

Q ss_pred             hhhccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC-ccHHHHHHcCCceEEeCCC
Q 021831          150 ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS-KSIDRVLAAGAEQAVDYSS  227 (307)
Q Consensus       150 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~-~~~~~~~~~g~~~v~~~~~  227 (307)
                      ++.+.+...+.|||++++ .+++++|++|||+|+ |++|++++++++.+|+ +|+++..+ ++++.++++|+++++++.+
T Consensus         2 ~d~~~l~d~~~ta~~a~~-~a~v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~   79 (195)
T d1kola2           2 RDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLD   79 (195)
T ss_dssp             HHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSS
T ss_pred             chHHhcccHHHHHHHHHH-HhCCCCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCC
Confidence            466777889999999986 799999999999995 9999999999999999 78888655 4567799999999999888


Q ss_pred             hhHHHHhc-----CCccEEEECCCC---------------hhhHHHHHhcccCCcEEEEeccCc
Q 021831          228 KDIELAIK-----GKFDAVLDTIGA---------------PETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       228 ~~~~~~~~-----~~~dvvid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .++.+.+.     .++|++||++|.               ...++.++++++++|+++.+|.+.
T Consensus        80 ~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~  143 (195)
T d1kola2          80 TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYV  143 (195)
T ss_dssp             SCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCC
T ss_pred             cCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecC
Confidence            77766553     389999999984               357999999999999999999754

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.35  E-value=4.2e-13  Score=91.66  Aligned_cols=73  Identities=26%  Similarity=0.294  Sum_probs=63.4

Q ss_pred             CChhhhccccchHHHHHHHHH---HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCC
Q 021831          147 VTHADASAIPFAALTAWRALK---CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGA  219 (307)
Q Consensus       147 ~~~~~aa~~~~~~~ta~~~l~---~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~  219 (307)
                      +|+++++.++.+++|||+++.   +....+++++|||+|++|++|.+++|+++.+|++|++++++ ++.++++++|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHHHCCC
Confidence            578999999999999998764   34556899999999999999999999999999999998655 56788898874

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=98.44  E-value=2.2e-06  Score=71.39  Aligned_cols=133  Identities=18%  Similarity=0.211  Sum_probs=90.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCce-EEeCCChh-HH---HHhc---CCccEEEEC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQ-AVDYSSKD-IE---LAIK---GKFDAVLDT  244 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~~-v~~~~~~~-~~---~~~~---~~~dvvid~  244 (307)
                      .|+++||+||++++|++.++.+...|++|+...++++ .+..++.+... ..|.++.+ ..   +.+.   ++.|++|++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnn   83 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNN   83 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEe
Confidence            5899999999999999999999999999988876554 44456666542 23444432 22   2221   789999999


Q ss_pred             CCChh-------------------------hHHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHHHHHHHh
Q 021831          245 IGAPE-------------------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ  297 (307)
Q Consensus       245 ~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (307)
                      .|...                         ....++..|+  .+|++|.++.............++....+...+.+.+.
T Consensus        84 AG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA  163 (248)
T d2d1ya1          84 AAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLA  163 (248)
T ss_dssp             CCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHHHHHHHHHHH
Confidence            88410                         1245556664  36899999987765555555556666666655555544


Q ss_pred             -hhhcccccc
Q 021831          298 -TWYSYGIGC  306 (307)
Q Consensus       298 -~~~~~~i~~  306 (307)
                       .+.++||+|
T Consensus       164 ~el~~~gIrV  173 (248)
T d2d1ya1         164 LDLAPLRIRV  173 (248)
T ss_dssp             HHHGGGTEEE
T ss_pred             HHhhhhCcEE
Confidence             667788886

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=98.38  E-value=1.2e-06  Score=72.86  Aligned_cols=133  Identities=22%  Similarity=0.276  Sum_probs=88.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHcCCc---eEEeCCChh-HHH---Hhc---CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAAGAE---QAVDYSSKD-IEL---AIK---GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~g~~---~v~~~~~~~-~~~---~~~---~~~dvv  241 (307)
                      +|+++||+||++++|.+.++.+...|++|+...++++ .+. .++++..   ...|.++.+ ..+   .+.   ++.|++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL   82 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence            4889999999999999999999999999998877654 222 3445432   234444432 222   221   689999


Q ss_pred             EECCCChh-------------------------hHHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHHHHHH
Q 021831          242 LDTIGAPE-------------------------TERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKK  294 (307)
Q Consensus       242 id~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (307)
                      |++.|...                         ....++..|  +.+|++|.++.............+.....+...+-+
T Consensus        83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt~  162 (243)
T d1q7ba_          83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSK  162 (243)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHH
T ss_pred             hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHHHHHHHH
Confidence            99987410                         124566666  457999999987665544444555555666665555


Q ss_pred             HHh-hhhcccccc
Q 021831          295 RMQ-TWYSYGIGC  306 (307)
Q Consensus       295 ~~~-~~~~~~i~~  306 (307)
                      .+. .+.++||+|
T Consensus       163 ~lA~ela~~gIrV  175 (243)
T d1q7ba_         163 SLAREVASRGITV  175 (243)
T ss_dssp             HHHHHHGGGTEEE
T ss_pred             HHHHHhCccCeEE
Confidence            554 667788886

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=98.33  E-value=5.5e-06  Score=68.83  Aligned_cols=133  Identities=15%  Similarity=0.137  Sum_probs=88.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH---HHHHHcCCceE---EeCCChh-HHH---Hhc---CCccE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAGAEQA---VDYSSKD-IEL---AIK---GKFDA  240 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~---~~~~~~g~~~v---~~~~~~~-~~~---~~~---~~~dv  240 (307)
                      .|+.+||+||++++|.+.++.+...|++|+...+.+..   ..+++.|....   .|.++++ ..+   .+.   +++|+
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   83 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47899999999999999999999999999888765432   22456665422   2444432 222   121   68999


Q ss_pred             EEECCCChh-------------------------hHHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHHHH
Q 021831          241 VLDTIGAPE-------------------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLLK  293 (307)
Q Consensus       241 vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  293 (307)
                      +|++.|...                         ....++..|+  .+|++|.++.............++....+...+-
T Consensus        84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt  163 (247)
T d2ew8a1          84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFT  163 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhccHHHHH
Confidence            999988510                         1134555553  4699999998766555555555666666666555


Q ss_pred             HHHh-hhhcccccc
Q 021831          294 KRMQ-TWYSYGIGC  306 (307)
Q Consensus       294 ~~~~-~~~~~~i~~  306 (307)
                      +.+. .+.++||+|
T Consensus       164 k~lA~ela~~gIrV  177 (247)
T d2ew8a1         164 RALASDLGKDGITV  177 (247)
T ss_dssp             HHHHHHHGGGTEEE
T ss_pred             HHHHHHhcccCeEE
Confidence            5544 667888886

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.32  E-value=5.4e-06  Score=69.17  Aligned_cols=133  Identities=17%  Similarity=0.234  Sum_probs=85.9

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCccHH-H----HHHcCCceEEe--CCChh-HHHHh---c---CC
Q 021831          174 EGQRLLVLGGGG--AVGFAAVQFSVASGCHVSATCGSKSID-R----VLAAGAEQAVD--YSSKD-IELAI---K---GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g--~~G~~~~~~a~~~G~~Vi~~~~~~~~~-~----~~~~g~~~v~~--~~~~~-~~~~~---~---~~  237 (307)
                      .|+++||+||+|  ++|.+.++.+...|++|+...++++.. .    ....+....+.  .++++ ..+.+   .   ++
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence            589999999877  799999999989999998777665422 1    23344444443  33322 22211   1   68


Q ss_pred             ccEEEECCCChh-----------------------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHHH
Q 021831          238 FDAVLDTIGAPE-----------------------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIAT  288 (307)
Q Consensus       238 ~dvvid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  288 (307)
                      .|+++++.|...                             ....+...++++|++|.++.............+.....+
T Consensus        87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa  166 (256)
T d1ulua_          87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKAA  166 (256)
T ss_dssp             EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHHHHHHH
T ss_pred             ceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCchHHHHHHHH
Confidence            999999987410                             012445567788999999876654444444455555555


Q ss_pred             HHHHHHHHh-hhhcccccc
Q 021831          289 TVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       289 ~~~~~~~~~-~~~~~~i~~  306 (307)
                      ...+-+.+. .+.++||+|
T Consensus       167 l~~ltr~lA~ela~~gIrV  185 (256)
T d1ulua_         167 LEASVRYLAYELGPKGVRV  185 (256)
T ss_dssp             HHHHHHHHHHHHGGGTCEE
T ss_pred             HHHHHHHHHHHhcccCCEE
Confidence            555555554 667788886

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=8.1e-06  Score=67.65  Aligned_cols=133  Identities=19%  Similarity=0.219  Sum_probs=88.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHcCCc--eEEeCCChhHHHH-hc--CCccEEEECCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAAGAE--QAVDYSSKDIELA-IK--GKFDAVLDTIG  246 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~g~~--~v~~~~~~~~~~~-~~--~~~dvvid~~g  246 (307)
                      .|+++||+||++++|.+.++.+...|++|+.+.++++ .+. .++++..  ...|.++.+..+. +.  +++|++|++.|
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnAg   85 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEeccc
Confidence            6899999999999999999999999999999877643 232 3444433  2335555433333 33  68999999987


Q ss_pred             Chh-------------------------hHHHHHh-ccc--CCcEEEEeccCcccccccccceechhHHHHHHHHHHHh-
Q 021831          247 APE-------------------------TERLGLN-FLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ-  297 (307)
Q Consensus       247 ~~~-------------------------~~~~~~~-~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  297 (307)
                      ...                         ....++. .++  .+|+++.++.............++....+...+-+.+. 
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~  165 (244)
T d1pr9a_          86 VALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMAL  165 (244)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHHHHHHHHHHHH
Confidence            510                         1134444 333  46999999987665444445555555555555555554 


Q ss_pred             hhhcccccc
Q 021831          298 TWYSYGIGC  306 (307)
Q Consensus       298 ~~~~~~i~~  306 (307)
                      .+.++||++
T Consensus       166 el~~~gIrv  174 (244)
T d1pr9a_         166 ELGPHKIRV  174 (244)
T ss_dssp             HHGGGTEEE
T ss_pred             HhCCCcEEE
Confidence            566778886

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.30  E-value=3.7e-06  Score=69.35  Aligned_cols=129  Identities=22%  Similarity=0.256  Sum_probs=85.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCC--hh----HHHHh----c-CCccEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSS--KD----IELAI----K-GKFDAVL  242 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~--~~----~~~~~----~-~~~dvvi  242 (307)
                      .|++|||+||++++|.+.++.+...|++|+.+...++...    ..........  .+    ....+    . +++|++|
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lI   76 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAIL   76 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----cccceeecccCcHHHHHHHHHHHHHHhCCCCceEEE
Confidence            4789999999999999999999999999988865443211    1111111111  11    11111    1 3699999


Q ss_pred             ECCCCh-----------h---------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHHHHHHHHHHH
Q 021831          243 DTIGAP-----------E---------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM  296 (307)
Q Consensus       243 d~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (307)
                      ++.|..           +               ....++..|+++|++|.++.............++....+...+.+.+
T Consensus        77 nnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~l  156 (236)
T d1dhra_          77 CVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSL  156 (236)
T ss_dssp             ECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             ECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCCcccHHHHHHHHHHHHHH
Confidence            998741           0               12456667889999999998776555555566777777777777777


Q ss_pred             hhhh---cccccc
Q 021831          297 QTWY---SYGIGC  306 (307)
Q Consensus       297 ~~~~---~~~i~~  306 (307)
                      ....   .+||++
T Consensus       157 a~El~~~~~gI~v  169 (236)
T d1dhra_         157 AGKNSGMPSGAAA  169 (236)
T ss_dssp             TSTTSSCCTTCEE
T ss_pred             HHHhccCCCcEEE
Confidence            6443   478876

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=98.28  E-value=3.7e-06  Score=70.21  Aligned_cols=133  Identities=16%  Similarity=0.195  Sum_probs=87.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HH-HHHHcCCc---eEEeCCChh-HHH---Hhc---CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-ID-RVLAAGAE---QAVDYSSKD-IEL---AIK---GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~-~~~~~g~~---~v~~~~~~~-~~~---~~~---~~~dvv  241 (307)
                      .|+++||+||++++|++.++.+...|++|+...++++ .+ ..++++..   ...|.++++ ..+   .+.   +++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   83 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence            5899999999999999999999999999988876543 22 24555543   223444432 222   221   689999


Q ss_pred             EECCCChh-------------------------hHHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHHHHHH
Q 021831          242 LDTIGAPE-------------------------TERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKK  294 (307)
Q Consensus       242 id~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (307)
                      |++.|...                         ....++..|  +.+|++|.++.............+.....+...+-+
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt~  163 (254)
T d1hdca_          84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSK  163 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHHHHHHHH
Confidence            99988410                         113444444  357999999987765555555556666666666666


Q ss_pred             HHh-hhhcccccc
Q 021831          295 RMQ-TWYSYGIGC  306 (307)
Q Consensus       295 ~~~-~~~~~~i~~  306 (307)
                      .+. .+.++||+|
T Consensus       164 ~lA~e~a~~gIrV  176 (254)
T d1hdca_         164 LAAVELGTDRIRV  176 (254)
T ss_dssp             HHHHHHGGGTEEE
T ss_pred             HHHHHhCCCceEE
Confidence            555 556778886

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.27  E-value=5.4e-06  Score=68.76  Aligned_cols=133  Identities=15%  Similarity=0.096  Sum_probs=88.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H-HHHHcCCce---EEeCCChh-HH---HHhc---CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAGAEQ---AVDYSSKD-IE---LAIK---GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~-~~~~~g~~~---v~~~~~~~-~~---~~~~---~~~dvv  241 (307)
                      .|+++||+||++++|++.++.+...|++|+...++++. + ..++++...   ..|.++++ ..   +.+.   +++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idil   84 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   84 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEE
Confidence            58999999999999999999999999999988766542 2 244554321   23444432 22   2222   689999


Q ss_pred             EECCCChh-------------------------hHHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHHHHHH
Q 021831          242 LDTIGAPE-------------------------TERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKK  294 (307)
Q Consensus       242 id~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (307)
                      |++.|...                         ....++..|  +.+|++|.++.............++........+-+
T Consensus        85 innAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk  164 (244)
T d1nffa_          85 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTK  164 (244)
T ss_dssp             EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHH
T ss_pred             EECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHHHHHHHH
Confidence            99998510                         013344455  356999999987765555555556666666666666


Q ss_pred             HHh-hhhcccccc
Q 021831          295 RMQ-TWYSYGIGC  306 (307)
Q Consensus       295 ~~~-~~~~~~i~~  306 (307)
                      .+. .+.++||++
T Consensus       165 ~lA~el~~~gIrV  177 (244)
T d1nffa_         165 STALELGPSGIRV  177 (244)
T ss_dssp             HHHHHHGGGTEEE
T ss_pred             HHHHHhcccCEEE
Confidence            555 667788886

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=5.1e-06  Score=69.15  Aligned_cols=133  Identities=20%  Similarity=0.324  Sum_probs=88.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHH-HHcCCceE--EeCCChh-HHH---Hhc---CCccEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRV-LAAGAEQA--VDYSSKD-IEL---AIK---GKFDAVL  242 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~-~~~g~~~v--~~~~~~~-~~~---~~~---~~~dvvi  242 (307)
                      .|+++||+||++++|.+.++.+...|++|+...++++ .+.+ ++++....  .|.++.+ ..+   .+.   +++|++|
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilV   84 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   84 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            5899999999999999999999999999998876644 3333 44443222  2444432 222   111   6899999


Q ss_pred             ECCCChh--------------------------hHHHHHhccc-CCcEEEEeccCcccccccccceechhHHHHHHHHHH
Q 021831          243 DTIGAPE--------------------------TERLGLNFLK-RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKR  295 (307)
Q Consensus       243 d~~g~~~--------------------------~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (307)
                      ++.|...                          ....++..|+ .+|++|.++.............+.....+...+.+.
T Consensus        85 nnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~  164 (250)
T d1ydea1          85 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKA  164 (250)
T ss_dssp             ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHH
T ss_pred             ecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccCcchhHHHHhhHHHHHHH
Confidence            9988310                          1244555664 468999999776655555555666666666666666


Q ss_pred             Hh-hhhcccccc
Q 021831          296 MQ-TWYSYGIGC  306 (307)
Q Consensus       296 ~~-~~~~~~i~~  306 (307)
                      +. .+.++||+|
T Consensus       165 lA~e~a~~gIrV  176 (250)
T d1ydea1         165 LALDESPYGVRV  176 (250)
T ss_dssp             HHHHHGGGTCEE
T ss_pred             HHHHhcccCeEE
Confidence            55 566778886

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.24  E-value=1.1e-05  Score=66.27  Aligned_cols=130  Identities=18%  Similarity=0.223  Sum_probs=83.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEE-eCCChhHHHHhc--CCccEEEECCCChh-
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAV-DYSSKDIELAIK--GKFDAVLDTIGAPE-  249 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~--~~~dvvid~~g~~~-  249 (307)
                      +|+++||+||++++|.+.++.+...|++|+...+++  +.+++.+...+. |.++ .......  +++|+++++.|... 
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~--~~l~~~~~~~~~~Dv~~-~~~~~~~~~g~iD~lVnnAG~~~~   79 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE--ELLKRSGHRYVVCDLRK-DLDLLFEKVKEVDILVLNAGGPKA   79 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHTCSEEEECCTTT-CHHHHHHHSCCCSEEEECCCCCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--HHHHhcCCcEEEcchHH-HHHHHHHHhCCCcEEEecccccCC
Confidence            478999999999999999999999999998887654  445565544322 2222 2222222  68999999988410 


Q ss_pred             ------------------------hHHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHH-HHHHHHhhhhcc
Q 021831          250 ------------------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTV-LLKKRMQTWYSY  302 (307)
Q Consensus       250 ------------------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  302 (307)
                                              ....++..|+  .+|++|.++.............+.....+.. +.+.....+.++
T Consensus        80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~  159 (234)
T d1o5ia_          80 GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPY  159 (234)
T ss_dssp             BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             cchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHhccc
Confidence                                    1134444553  5689998887655444444444444444444 444445567788


Q ss_pred             cccc
Q 021831          303 GIGC  306 (307)
Q Consensus       303 ~i~~  306 (307)
                      ||+|
T Consensus       160 gIrV  163 (234)
T d1o5ia_         160 GITV  163 (234)
T ss_dssp             TEEE
T ss_pred             CeEE
Confidence            8886

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.24  E-value=1.4e-05  Score=66.51  Aligned_cols=133  Identities=24%  Similarity=0.331  Sum_probs=84.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H-----HHHHcCCce---EEeCCChh-H---HHHhc---CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-----RVLAAGAEQ---AVDYSSKD-I---ELAIK---GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~-----~~~~~g~~~---v~~~~~~~-~---~~~~~---~~  237 (307)
                      .|+++||+||++++|++.++.+...|++|+...++.+. +     ..++.|.+.   ..|.++++ .   .+.+.   ++
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   83 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            48899999999999999999999999999988766432 1     123445432   22444432 2   22221   68


Q ss_pred             ccEEEECCCChh-------------------------hHHHHHhccc--CCcEEEEeccCcccc-cccccceechhHHHH
Q 021831          238 FDAVLDTIGAPE-------------------------TERLGLNFLK--RGGHYMTLHGETAAL-ADHYGLALGLPIATT  289 (307)
Q Consensus       238 ~dvvid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~  289 (307)
                      +|++|++.|...                         ....++..|+  .+|++|.++...... .......++....+.
T Consensus        84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asKaal  163 (251)
T d1vl8a_          84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGV  163 (251)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHHHhH
Confidence            999999988510                         1245666674  468999998754422 222333445555555


Q ss_pred             HHHHHHHh-hhhcccccc
Q 021831          290 VLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       290 ~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+.+.+. .+.++||++
T Consensus       164 ~~lt~~lA~e~~~~gIrV  181 (251)
T d1vl8a_         164 ASLTKALAKEWGRYGIRV  181 (251)
T ss_dssp             HHHHHHHHHHHGGGTCEE
T ss_pred             HHHHHHHHHHhcccCeEE
Confidence            55555544 667788886

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=98.24  E-value=5.1e-06  Score=69.57  Aligned_cols=133  Identities=18%  Similarity=0.268  Sum_probs=85.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCce---EEeCCChh-HHHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAEQ---AVDYSSKD-IELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~~---v~~~~~~~-~~~~~~------~~~  238 (307)
                      .|+++||+||++++|++.++.+...|++|+.+.++++ .+.    +++.|.+.   ..|.++++ ..+.+.      +++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            5899999999999999999999999999988876543 222    33445432   23444432 222221      689


Q ss_pred             cEEEECCCChh--------------------------hHHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHH
Q 021831          239 DAVLDTIGAPE--------------------------TERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       239 dvvid~~g~~~--------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      |++|++.|...                          ....++..|  +.+|++|.++.............++....+..
T Consensus        84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~  163 (260)
T d1zema1          84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAII  163 (260)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHHH
T ss_pred             CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHHHHH
Confidence            99999987410                          013444544  56899999997765444444444555555555


Q ss_pred             HHHHHHh-hhhcccccc
Q 021831          291 LLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~-~~~~~~i~~  306 (307)
                      .+.+.+. .+.++||++
T Consensus       164 ~ltk~lA~el~~~gIrV  180 (260)
T d1zema1         164 ALTETAALDLAPYNIRV  180 (260)
T ss_dssp             HHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHhhhhCCEE
Confidence            5555544 667778876

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.24  E-value=4.8e-06  Score=69.39  Aligned_cols=133  Identities=20%  Similarity=0.185  Sum_probs=87.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H----HHHHcCCc---eEEeCCChh-H---HHHhc---CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAE---QAVDYSSKD-I---ELAIK---GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~----~~~~~g~~---~v~~~~~~~-~---~~~~~---~~~  238 (307)
                      .++.+||+||++++|++.++.+...|++|+.+.++++. +    .+++.|.+   ...|.++++ .   .+.+.   +++
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   88 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV   88 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence            47888999999999999999988999999988776432 2    23444543   223444432 2   22221   689


Q ss_pred             cEEEECCCChh-------------------------hHHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHHH
Q 021831          239 DAVLDTIGAPE-------------------------TERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTVL  291 (307)
Q Consensus       239 dvvid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  291 (307)
                      |++|++.|...                         ....++..|  +.+|++|.++.............++....+...
T Consensus        89 Dilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~  168 (251)
T d2c07a1          89 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIG  168 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred             eeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHHHHHH
Confidence            99999987510                         113444455  457999999987765555555556666666666


Q ss_pred             HHHHHh-hhhcccccc
Q 021831          292 LKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       292 ~~~~~~-~~~~~~i~~  306 (307)
                      +.+.+. .+.++||+|
T Consensus       169 ltr~lA~el~~~gIrV  184 (251)
T d2c07a1         169 FTKSLAKELASRNITV  184 (251)
T ss_dssp             HHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHhhhhCeEE
Confidence            666655 567788886

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=98.23  E-value=9.5e-06  Score=67.68  Aligned_cols=133  Identities=15%  Similarity=0.228  Sum_probs=87.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-H-HHHHHcCCceE---EeCCChh-HHHHhc------CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-I-DRVLAAGAEQA---VDYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~-~~~~~~g~~~v---~~~~~~~-~~~~~~------~~~dvv  241 (307)
                      .|+++||+||++++|++.++.+...|++|+...++++ . +..++++....   .|.++++ ..+.+.      +++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   83 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL   83 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            4889999999999999999999999999998876543 2 23566665432   2444433 222121      689999


Q ss_pred             EECCCChh-------------------------hHHHHHhc-cc--CCcEEEEeccCcccccccccceechhHHHHHHHH
Q 021831          242 LDTIGAPE-------------------------TERLGLNF-LK--RGGHYMTLHGETAALADHYGLALGLPIATTVLLK  293 (307)
Q Consensus       242 id~~g~~~-------------------------~~~~~~~~-l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  293 (307)
                      |++.|...                         ....++.. ++  .+|++|.++.............+.....+...+-
T Consensus        84 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt  163 (256)
T d1k2wa_          84 VNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLT  163 (256)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             EeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhHHHHHH
Confidence            99988410                         01233433 33  4699999998766555544445555555555555


Q ss_pred             HHHh-hhhcccccc
Q 021831          294 KRMQ-TWYSYGIGC  306 (307)
Q Consensus       294 ~~~~-~~~~~~i~~  306 (307)
                      +.+. .+.++||+|
T Consensus       164 ~~lA~el~~~gIrV  177 (256)
T d1k2wa_         164 QSAGLNLIRHGINV  177 (256)
T ss_dssp             HHHHHHHGGGTEEE
T ss_pred             HHHHHHhcccCeEE
Confidence            5544 667788886

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.23  E-value=6.7e-06  Score=70.37  Aligned_cols=133  Identities=20%  Similarity=0.274  Sum_probs=88.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc----------HHH----HHHcCCceEEeCCChh-HHHHhc---
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS----------IDR----VLAAGAEQAVDYSSKD-IELAIK---  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~----------~~~----~~~~g~~~v~~~~~~~-~~~~~~---  235 (307)
                      .|+++||+||++++|.+.++.+...|++|+...+..+          .+.    ....+.....+..+.+ ..+.+.   
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            5899999999999999999999999999988743211          111    2234455556665532 222221   


Q ss_pred             ---CCccEEEECCCChh-------------------------hHHHHHhccc--CCcEEEEeccCcccccccccceechh
Q 021831          236 ---GKFDAVLDTIGAPE-------------------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLP  285 (307)
Q Consensus       236 ---~~~dvvid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~  285 (307)
                         +++|++|++.|...                         ....++..|+  .+|++|.++.............++..
T Consensus        86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~~~Y~as  165 (302)
T d1gz6a_          86 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAA  165 (302)
T ss_dssp             HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             HHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCcHHHHHH
Confidence               68999999988510                         1245556663  56999999987665555555556666


Q ss_pred             HHHHHHHHHHHh-hhhcccccc
Q 021831          286 IATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       286 ~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ..++..+.+.+. .+.++||+|
T Consensus       166 Kaal~~lt~~la~E~~~~gIrV  187 (302)
T d1gz6a_         166 KLGLLGLANTLVIEGRKNNIHC  187 (302)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEE
T ss_pred             HHHHHHHHHHHHHHHhccCCce
Confidence            666666655555 567888886

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.21  E-value=1.9e-05  Score=65.17  Aligned_cols=133  Identities=20%  Similarity=0.193  Sum_probs=87.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHcCCceE--EeCCChhHHH-Hhc--CCccEEEECCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAAGAEQA--VDYSSKDIEL-AIK--GKFDAVLDTIG  246 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~g~~~v--~~~~~~~~~~-~~~--~~~dvvid~~g  246 (307)
                      .|+++||+||++++|.+.++.+...|++|+.+.++++ .+. .+++.....  .|.++.+..+ .+.  +++|++|++.|
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg   83 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCc
Confidence            5899999999999999999999999999999877644 222 345443222  3444443333 233  68999999988


Q ss_pred             Chh----------h---------------HHHHHhc-cc--CCcEEEEeccCcccccccccceechhHHHHHHHHHHHh-
Q 021831          247 APE----------T---------------ERLGLNF-LK--RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ-  297 (307)
Q Consensus       247 ~~~----------~---------------~~~~~~~-l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  297 (307)
                      ...          .               ...++.. +.  .+|++|.++.............++....+...+.+.+. 
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~  163 (242)
T d1cyda_          84 LVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAM  163 (242)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred             cccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHHHHHHHHHHHH
Confidence            410          0               1233332 32  45899999987665555555555666666655555554 


Q ss_pred             hhhcccccc
Q 021831          298 TWYSYGIGC  306 (307)
Q Consensus       298 ~~~~~~i~~  306 (307)
                      .+.++||+|
T Consensus       164 e~~~~gIrv  172 (242)
T d1cyda_         164 ELGPHKIRV  172 (242)
T ss_dssp             HHGGGTEEE
T ss_pred             HhCccCeec
Confidence            667788886

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.19  E-value=9.4e-06  Score=67.62  Aligned_cols=133  Identities=21%  Similarity=0.312  Sum_probs=87.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HH-HHHHcCCceEE---eCCCh-hHHH---Hhc---CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-ID-RVLAAGAEQAV---DYSSK-DIEL---AIK---GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~-~~~~~g~~~v~---~~~~~-~~~~---~~~---~~~dvv  241 (307)
                      .|+++||+||++++|.+.++.+...|++|+...++++ .+ ..++++.....   |..+. +..+   .+.   +++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil   84 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            5889999999999999999999999999988876543 22 34566654333   33332 2222   221   689999


Q ss_pred             EECCCChh-------------------------hHHHHHhccc-CCcEEEEeccCcccccccccceechhHHHHHHHHHH
Q 021831          242 LDTIGAPE-------------------------TERLGLNFLK-RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKR  295 (307)
Q Consensus       242 id~~g~~~-------------------------~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (307)
                      |++.|...                         ....++..|+ .+|++|.++.............+.....+...+.+.
T Consensus        85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~  164 (253)
T d1hxha_          85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRA  164 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHH
T ss_pred             EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCccccccccchhHHHHHHHHH
Confidence            99998510                         1245556664 579999999876655555555566666666666665


Q ss_pred             Hh-hhhc--ccccc
Q 021831          296 MQ-TWYS--YGIGC  306 (307)
Q Consensus       296 ~~-~~~~--~~i~~  306 (307)
                      +. .+.+  ++|+|
T Consensus       165 lA~e~~~~g~~IrV  178 (253)
T d1hxha_         165 AALSCRKQGYAIRV  178 (253)
T ss_dssp             HHHHHHHHTCCEEE
T ss_pred             HHHHHhhcCCCEEE
Confidence            54 3344  35775

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.19  E-value=6.8e-06  Score=68.60  Aligned_cols=133  Identities=17%  Similarity=0.222  Sum_probs=86.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HH----HHHHcCCce-E--EeCCChh-HHH---Hhc---CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-ID----RVLAAGAEQ-A--VDYSSKD-IEL---AIK---GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~----~~~~~g~~~-v--~~~~~~~-~~~---~~~---~~~  238 (307)
                      .|+++||+||++++|.+.++.+...|++|+.+.++++ .+    .+++.|... .  .|.++++ ..+   .+.   +++
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i   89 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5899999999999999999999999999998876543 22    234555432 2  2333432 222   211   689


Q ss_pred             cEEEECCCChh------------------------hHHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHHH
Q 021831          239 DAVLDTIGAPE------------------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLL  292 (307)
Q Consensus       239 dvvid~~g~~~------------------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  292 (307)
                      |+++++.|...                        ....++..+.  .+|++|.++.............++....+...+
T Consensus        90 DilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~l  169 (255)
T d1fmca_          90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHL  169 (255)
T ss_dssp             CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred             CEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHHHHHHHH
Confidence            99999988520                        1133444443  367888888766554554555566666666666


Q ss_pred             HHHHh-hhhcccccc
Q 021831          293 KKRMQ-TWYSYGIGC  306 (307)
Q Consensus       293 ~~~~~-~~~~~~i~~  306 (307)
                      -+.+. .+.++||+|
T Consensus       170 t~~lA~el~~~gIrV  184 (255)
T d1fmca_         170 VRNMAFDLGEKNIRV  184 (255)
T ss_dssp             HHHHHHHHHTTTEEE
T ss_pred             HHHHHHHhCccCeEE
Confidence            66555 667778886

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=98.18  E-value=1.9e-05  Score=66.05  Aligned_cols=133  Identities=14%  Similarity=0.241  Sum_probs=85.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--H----HHHHHcCCceE---EeCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--I----DRVLAAGAEQA---VDYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--~----~~~~~~g~~~v---~~~~~~~-~~~~~~------~~  237 (307)
                      .|+++||+||++++|.+.++.+...|++|+...++.+  .    +.+++.+.+..   .|.++++ ..+.+.      ++
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   85 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4889999999999999999999999999998876543  1    12345554322   2444432 222111      68


Q ss_pred             ccEEEECCCChh-------------------------hHHHHHhccc---CCcEEEEeccCcccccccccceechhHHHH
Q 021831          238 FDAVLDTIGAPE-------------------------TERLGLNFLK---RGGHYMTLHGETAALADHYGLALGLPIATT  289 (307)
Q Consensus       238 ~dvvid~~g~~~-------------------------~~~~~~~~l~---~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  289 (307)
                      +|++|++.|...                         ....++..|.   .++.++.++.............++....+.
T Consensus        86 iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asKaal  165 (261)
T d1geea_          86 LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGM  165 (261)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccCCccc
Confidence            999999988510                         1244555552   245688788766655555555566666666


Q ss_pred             HHHHHHHh-hhhcccccc
Q 021831          290 VLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       290 ~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+-+.+. .+.++||+|
T Consensus       166 ~~lt~~lA~e~~~~gIrV  183 (261)
T d1geea_         166 KLMTETLALEYAPKGIRV  183 (261)
T ss_dssp             HHHHHHHHHHHGGGTCEE
T ss_pred             hhhHHHHHHHhhhhCcEE
Confidence            66655555 567778876

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=98.18  E-value=1.9e-05  Score=65.82  Aligned_cols=133  Identities=21%  Similarity=0.267  Sum_probs=87.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcC--Cc-e--EEeCCChh-HHH---Hhc---C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAG--AE-Q--AVDYSSKD-IEL---AIK---G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g--~~-~--v~~~~~~~-~~~---~~~---~  236 (307)
                      .|+++||+||++++|++.++.+...|++|+...++.+ .+.    +.+.+  .. .  ..|.++++ ..+   .+.   +
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            4789999999999999999999999999998876543 222    22222  22 1  22444432 222   221   7


Q ss_pred             CccEEEECCCCh--h------------------------hHHHHHhccc--CCcEEEEeccCcccccccccceechhHHH
Q 021831          237 KFDAVLDTIGAP--E------------------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIAT  288 (307)
Q Consensus       237 ~~dvvid~~g~~--~------------------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  288 (307)
                      ++|++|++.|..  .                        ....++..|+  .+|++|.++.............+.....+
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa  162 (258)
T d1iy8a_          83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHG  162 (258)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHHH
T ss_pred             CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHHHH
Confidence            899999998731  0                        0134444543  67999999987765555555666666666


Q ss_pred             HHHHHHHHh-hhhcccccc
Q 021831          289 TVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       289 ~~~~~~~~~-~~~~~~i~~  306 (307)
                      ...+.+.+. .+.++||+|
T Consensus       163 l~~lt~~lA~el~~~gIrV  181 (258)
T d1iy8a_         163 VVGLTRNSAVEYGRYGIRI  181 (258)
T ss_dssp             HHHHHHHHHHHHGGGTCEE
T ss_pred             HHHHHHHHHHHhCccCceE
Confidence            666666655 567778886

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=1.3e-05  Score=66.82  Aligned_cols=133  Identities=15%  Similarity=0.220  Sum_probs=84.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHc----CC-c---eEEeCCChh-HHHHhc------C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAA----GA-E---QAVDYSSKD-IELAIK------G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~----g~-~---~v~~~~~~~-~~~~~~------~  236 (307)
                      .|+++||+||++++|++.++.+...|++|+.+.++.+ .+. ..++    +. .   ...|.++.+ ..+.+.      +
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            4889999999999999999999999999999877643 222 2222    11 1   123444432 222221      7


Q ss_pred             CccEEEECCCChh-----------------hHHHHHhccc-----CCcEEEEeccCcccccccccceechhHHHHHHHHH
Q 021831          237 KFDAVLDTIGAPE-----------------TERLGLNFLK-----RGGHYMTLHGETAALADHYGLALGLPIATTVLLKK  294 (307)
Q Consensus       237 ~~dvvid~~g~~~-----------------~~~~~~~~l~-----~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (307)
                      ++|++|++.|...                 ....++..|.     .+|++|.++.............+.....+...+-+
T Consensus        82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltr  161 (254)
T d2gdza1          82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTR  161 (254)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHHHHHHHHHHH
Confidence            8999999998521                 1234445553     25899999987665444444455555555555544


Q ss_pred             H---Hhhhhcccccc
Q 021831          295 R---MQTWYSYGIGC  306 (307)
Q Consensus       295 ~---~~~~~~~~i~~  306 (307)
                      .   ...+.++||+|
T Consensus       162 s~ala~e~~~~gIrV  176 (254)
T d2gdza1         162 SAALAANLMNSGVRL  176 (254)
T ss_dssp             HHHHHHHHHTCCEEE
T ss_pred             HHHHHHHhcCCCEEE
Confidence            2   33567888886

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=98.17  E-value=1.4e-05  Score=66.77  Aligned_cols=133  Identities=21%  Similarity=0.306  Sum_probs=86.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCce---EEeCCChh-H---HHHhc---C-C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAEQ---AVDYSSKD-I---ELAIK---G-K  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~~---v~~~~~~~-~---~~~~~---~-~  237 (307)
                      .|+++||+||++++|.+.++.+...|++|+...++++ .+.    +++.+...   ..|.++++ .   .+.+.   + .
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~   86 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   86 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence            5899999999999999999999999999998876543 222    33444432   23444432 2   22221   4 6


Q ss_pred             ccEEEECCCChh-------------------------hHHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHH
Q 021831          238 FDAVLDTIGAPE-------------------------TERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       238 ~dvvid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      .|+++++.|...                         ....++..|  +.+|++|.++.............+.....+..
T Consensus        87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~  166 (259)
T d2ae2a_          87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMD  166 (259)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHHHHHH
Confidence            999999988410                         113445555  45799999998766545444555555555555


Q ss_pred             HHHHHHh-hhhcccccc
Q 021831          291 LLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~-~~~~~~i~~  306 (307)
                      .+.+.+. .+.++||+|
T Consensus       167 ~lt~~lA~el~~~gIrV  183 (259)
T d2ae2a_         167 QLTRCLAFEWAKDNIRV  183 (259)
T ss_dssp             HHHHHHHHHTGGGTEEE
T ss_pred             HHHHHHHHHhCcCceEE
Confidence            5555544 567788886

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.16  E-value=1.2e-05  Score=67.29  Aligned_cols=133  Identities=19%  Similarity=0.308  Sum_probs=80.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc---eEEeCCChh-H---HHHhc----CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE---QAVDYSSKD-I---ELAIK----GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~---~v~~~~~~~-~---~~~~~----~~  237 (307)
                      +|+++||+||++++|++.++.+...|++|+...++++ .+.    +.+.+..   ...|.++++ .   .+.+.    +.
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   86 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   86 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            5899999999999999999999999999998877643 222    2333332   223444432 2   22221    46


Q ss_pred             ccEEEECCCChh-------------------------hHHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHH
Q 021831          238 FDAVLDTIGAPE-------------------------TERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       238 ~dvvid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      +|+++++.|...                         ....++..|  +.+|++|.++.............+.....+..
T Consensus        87 idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~  166 (259)
T d1xq1a_          87 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALN  166 (259)
T ss_dssp             CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHHHH
T ss_pred             cccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccccccccccccchh
Confidence            899999988521                         113445555  35699999998766555555555666666666


Q ss_pred             HHHHHHh-hhhcccccc
Q 021831          291 LLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~-~~~~~~i~~  306 (307)
                      .+.+.+. .+.++||+|
T Consensus       167 ~lt~~lA~e~~~~gIrV  183 (259)
T d1xq1a_         167 QLARNLACEWASDGIRA  183 (259)
T ss_dssp             HHHHHHHHHHGGGTCEE
T ss_pred             hhhHHHHHHhcccCeEE
Confidence            5555554 667888886

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=98.16  E-value=1.2e-05  Score=67.24  Aligned_cols=133  Identities=17%  Similarity=0.213  Sum_probs=86.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--HHH----H-HHcCCceE---EeCCChh-HHH---Hhc---C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDR----V-LAAGAEQA---VDYSSKD-IEL---AIK---G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--~~~----~-~~~g~~~v---~~~~~~~-~~~---~~~---~  236 (307)
                      .|+++||+||++++|++.++.+...|++|+.+.+++.  .+.    + ...+....   .|.++.+ ..+   .+.   +
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   82 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            5889999999999999999999999999998876532  222    1 22343322   2444432 222   221   6


Q ss_pred             CccEEEECCCChh-------------------------hHHHHHhccc--CCcEEEEeccCcccccccccceechhHHHH
Q 021831          237 KFDAVLDTIGAPE-------------------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATT  289 (307)
Q Consensus       237 ~~dvvid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  289 (307)
                      +.|++|++.|...                         ....++..|+  .+|++|.++.............++....+.
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal  162 (260)
T d1x1ta1          83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGV  162 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhhhH
Confidence            8999999988410                         1234555654  468999999877655555555556666666


Q ss_pred             HHHHHHHh-hhhcccccc
Q 021831          290 VLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       290 ~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+.+.+. .+.++||+|
T Consensus       163 ~~lt~~lA~el~~~gIrV  180 (260)
T d1x1ta1         163 VGFTKVTALETAGQGITA  180 (260)
T ss_dssp             HHHHHHHHHHHTTTTEEE
T ss_pred             HHhHHHHHHHhchhCcEE
Confidence            65555554 557778876

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=98.11  E-value=1.5e-05  Score=65.50  Aligned_cols=128  Identities=20%  Similarity=0.197  Sum_probs=82.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChh----------HHHHhc-CCccEEEE
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD----------IELAIK-GKFDAVLD  243 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~----------~~~~~~-~~~dvvid  243 (307)
                      +.+|||+||++++|.+.++.+...|++|+.+.+.++...    .....+..+...          ...... +++|++|+
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~lin   77 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFC   77 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc----cccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEE
Confidence            457999999999999999999999999999876654211    111111111100          111111 57999999


Q ss_pred             CCCChh--------------------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHHHHHHHHHHHh
Q 021831          244 TIGAPE--------------------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ  297 (307)
Q Consensus       244 ~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (307)
                      +.|...                          ....++..|+++|+++.++.............++....+...+-+.+.
T Consensus        78 nAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la  157 (235)
T d1ooea_          78 VAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLA  157 (235)
T ss_dssp             CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHH
T ss_pred             CCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccccchHHHHHHHHHHHHHHH
Confidence            988410                          124566778899999999987665555555566666677776766665


Q ss_pred             hhh---cccccc
Q 021831          298 TWY---SYGIGC  306 (307)
Q Consensus       298 ~~~---~~~i~~  306 (307)
                      ...   .++|++
T Consensus       158 ~e~~~~~~~i~v  169 (235)
T d1ooea_         158 AKDSGLPDNSAV  169 (235)
T ss_dssp             STTSSCCTTCEE
T ss_pred             HHhccCCCceEE
Confidence            333   356665

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.10  E-value=2.4e-05  Score=64.65  Aligned_cols=132  Identities=17%  Similarity=0.266  Sum_probs=81.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHcCCce-EEeCCChh-HHHHh---c---CCccEEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAAGAEQ-AVDYSSKD-IELAI---K---GKFDAVLD  243 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~g~~~-v~~~~~~~-~~~~~---~---~~~dvvid  243 (307)
                      .|+++||+||++++|++.++.+...|++|+...++++ .+. .++++... ..|.++++ ..+.+   .   +++|++|+
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn   83 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEE
Confidence            4889999999999999999999999999999877654 232 44555432 23444432 22222   1   68999999


Q ss_pred             CCCChh-------------------------hHHHHHhcccC--CcEEEEeccCcccccccccceechhHHHHHHHHHHH
Q 021831          244 TIGAPE-------------------------TERLGLNFLKR--GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM  296 (307)
Q Consensus       244 ~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (307)
                      +.|...                         ....++..|..  +|.++..+.. ..........++....+...+.+.+
T Consensus        84 nAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~-~~~~~~~~~~Y~asKaal~~ltk~l  162 (242)
T d1ulsa_          84 YAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASR-VYLGNLGQANYAASMAGVVGLTRTL  162 (242)
T ss_dssp             CCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG-GGGCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccc-cccCCCCCcchHHHHHHHHHHHHHH
Confidence            988510                         12345555543  4555555442 3233333444555555555555554


Q ss_pred             h-hhhcccccc
Q 021831          297 Q-TWYSYGIGC  306 (307)
Q Consensus       297 ~-~~~~~~i~~  306 (307)
                      . .+.++||+|
T Consensus       163 A~ela~~gIrV  173 (242)
T d1ulsa_         163 ALELGRWGIRV  173 (242)
T ss_dssp             HHHHGGGTEEE
T ss_pred             HHHHhhhCcEE
Confidence            4 667778886

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.10  E-value=2.4e-05  Score=65.70  Aligned_cols=133  Identities=20%  Similarity=0.218  Sum_probs=83.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-c-H----HHHHHcCCceEE---eCCCh-hHHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-S-I----DRVLAAGAEQAV---DYSSK-DIELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~-~----~~~~~~g~~~v~---~~~~~-~~~~~~~------~~  237 (307)
                      .|+++||+||++++|.+.++.+...|++|+...++. + .    +.+++.+.+...   |.+++ +..+.+.      ++
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   96 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK   96 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            489999999999999999999999999998875543 2 1    123455554322   33332 2222222      68


Q ss_pred             ccEEEECCCChh-------------------------hHHHHHhcccCCcEEEEeccCcccc-cccccceechhHHHHHH
Q 021831          238 FDAVLDTIGAPE-------------------------TERLGLNFLKRGGHYMTLHGETAAL-ADHYGLALGLPIATTVL  291 (307)
Q Consensus       238 ~dvvid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~  291 (307)
                      .|+++++.|...                         ....++..|..+|+++.++...... .......++....++..
T Consensus        97 idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~~~~~Y~asKaal~~  176 (272)
T d1g0oa_          97 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIET  176 (272)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHHHHHH
T ss_pred             CCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccccchhhHHHHHHHHHH
Confidence            999999987510                         1356777888899998887654322 22222333344444444


Q ss_pred             HHHH-Hhhhhcccccc
Q 021831          292 LKKR-MQTWYSYGIGC  306 (307)
Q Consensus       292 ~~~~-~~~~~~~~i~~  306 (307)
                      +-+. ...+.++||+|
T Consensus       177 ltk~lA~e~~~~gIrV  192 (272)
T d1g0oa_         177 FARCMAIDMADKKITV  192 (272)
T ss_dssp             HHHHHHHHHGGGTCEE
T ss_pred             HHHHHHHHhchhCeEE
Confidence            4444 44667888886

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.09  E-value=1.3e-05  Score=66.26  Aligned_cols=130  Identities=18%  Similarity=0.239  Sum_probs=84.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCcc-HH----HHHHcCCce-E--EeCCChh-HH---HHhc---CCccE
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATC-GSKS-ID----RVLAAGAEQ-A--VDYSSKD-IE---LAIK---GKFDA  240 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~-~~~~-~~----~~~~~g~~~-v--~~~~~~~-~~---~~~~---~~~dv  240 (307)
                      -+||+||++++|++.++.+...|++|+... ++++ .+    .+++.+.+. .  .|.++.+ ..   +.+.   +++|+
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV   82 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            479999999999999999999999998764 3332 22    234455432 2  2444432 22   2221   68999


Q ss_pred             EEECCCChh-------------------------hHHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHHHHH
Q 021831          241 VLDTIGAPE-------------------------TERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTVLLK  293 (307)
Q Consensus       241 vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  293 (307)
                      +|++.|...                         ....++..|  +.+|++|.++.............++....+...+.
T Consensus        83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~lt  162 (244)
T d1edoa_          83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFS  162 (244)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred             cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHHCh
Confidence            999988510                         124556666  46899999998776555555555666666666666


Q ss_pred             HHHh-hhhcccccc
Q 021831          294 KRMQ-TWYSYGIGC  306 (307)
Q Consensus       294 ~~~~-~~~~~~i~~  306 (307)
                      +.+. .+.++||+|
T Consensus       163 k~lA~el~~~gIrv  176 (244)
T d1edoa_         163 KTAAREGASRNINV  176 (244)
T ss_dssp             HHHHHHHHTTTEEE
T ss_pred             HHHHHHHhhhCcEE
Confidence            6555 567778886

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=98.07  E-value=2.5e-05  Score=65.71  Aligned_cols=133  Identities=17%  Similarity=0.199  Sum_probs=82.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc------eEEeCCChh-HH---HHhc---
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE------QAVDYSSKD-IE---LAIK---  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~------~v~~~~~~~-~~---~~~~---  235 (307)
                      .|+++||+||++++|++.++.+...|++|+.+.++++ .+.    +++.+..      ...|.++++ ..   +.+.   
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF   82 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            5899999999999999999999999999998877643 222    3344421      123444433 22   2221   


Q ss_pred             CCccEEEECCCCh------------hh---------------HHHHHhcc--cCCcEEEEeccCcccccccccceechhH
Q 021831          236 GKFDAVLDTIGAP------------ET---------------ERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPI  286 (307)
Q Consensus       236 ~~~dvvid~~g~~------------~~---------------~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~  286 (307)
                      +++|+++++.|..            +.               ...++..|  +.+|+++..+.............+....
T Consensus        83 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~asK  162 (274)
T d1xhla_          83 GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAK  162 (274)
T ss_dssp             SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHHHH
T ss_pred             CCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehhhh
Confidence            6899999998731            01               13444444  3567887776544433333334455555


Q ss_pred             HHHHHHHHHH-hhhhcccccc
Q 021831          287 ATTVLLKKRM-QTWYSYGIGC  306 (307)
Q Consensus       287 ~~~~~~~~~~-~~~~~~~i~~  306 (307)
                      .+...+.+.+ ..+.++||+|
T Consensus       163 aal~~ltk~lA~ela~~gIrV  183 (274)
T d1xhla_         163 AALDQYTRCTAIDLIQHGVRV  183 (274)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEE
T ss_pred             hHHHHHHHHHHHHHhHhCCce
Confidence            5555555554 4667888886

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=98.07  E-value=2.5e-05  Score=64.83  Aligned_cols=133  Identities=20%  Similarity=0.292  Sum_probs=84.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHHcCC---ceEE--eCCChh----HHHHhc---CCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGA---EQAV--DYSSKD----IELAIK---GKFD  239 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~~g~---~~v~--~~~~~~----~~~~~~---~~~d  239 (307)
                      .|+++||+||++++|++.++.+...|++|+.+.++.+. +. .++++.   ...+  |.++++    +.+.+.   +++|
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   84 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCce
Confidence            58999999999999999999999999999988775432 22 333332   1222  444432    222221   7899


Q ss_pred             EEEECCCChh-------------------------hHHHHHhcccC---CcEEEEeccCcccccccccceechhHHHHHH
Q 021831          240 AVLDTIGAPE-------------------------TERLGLNFLKR---GGHYMTLHGETAALADHYGLALGLPIATTVL  291 (307)
Q Consensus       240 vvid~~g~~~-------------------------~~~~~~~~l~~---~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  291 (307)
                      ++|++.|...                         ....++..|..   +|++|.++.............++....+...
T Consensus        85 iLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKaal~~  164 (251)
T d1zk4a1          85 TLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRI  164 (251)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHHHHhc
Confidence            9999988510                         12445555543   4688998876655444444555666666666


Q ss_pred             HHHHHhh---hhcccccc
Q 021831          292 LKKRMQT---WYSYGIGC  306 (307)
Q Consensus       292 ~~~~~~~---~~~~~i~~  306 (307)
                      +.+.+..   +..+||+|
T Consensus       165 lt~~lA~e~~l~~~gIrV  182 (251)
T d1zk4a1         165 MSKSAALDCALKDYDVRV  182 (251)
T ss_dssp             HHHHHHHHHHHTTCSEEE
T ss_pred             chHHHHHHHhcCCCcEEE
Confidence            6555442   35778876

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=98.07  E-value=2.4e-05  Score=65.27  Aligned_cols=133  Identities=17%  Similarity=0.236  Sum_probs=86.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-----HHHHHcCCce-E--EeCCChhHHH----Hhc----CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQ-A--VDYSSKDIEL----AIK----GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-----~~~~~~g~~~-v--~~~~~~~~~~----~~~----~~  237 (307)
                      .|+++||+||++++|.+.++.+...|++|+.+.++++.     +.+++.+... .  .|.++.+-.+    .+.    +.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~   84 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   84 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999999876532     2244455443 2  3444433221    111    46


Q ss_pred             ccEEEECCCChh-------------------------hHHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHH
Q 021831          238 FDAVLDTIGAPE-------------------------TERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       238 ~dvvid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      .|+++++.|...                         ....+...+  +.+|+++.++.............+.....++.
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~al~  164 (258)
T d1ae1a_          85 LNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAIN  164 (258)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             cEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHHHHHH
Confidence            899999988521                         012333333  46799999998766555555555555565555


Q ss_pred             HHHHHHh-hhhcccccc
Q 021831          291 LLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~-~~~~~~i~~  306 (307)
                      .+-+.+. .+.++||++
T Consensus       165 ~lt~~lA~el~~~gIrv  181 (258)
T d1ae1a_         165 QMTKSLACEWAKDNIRV  181 (258)
T ss_dssp             HHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHhcCcCcEEE
Confidence            5555554 556778875

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.05  E-value=2.3e-05  Score=65.40  Aligned_cols=133  Identities=19%  Similarity=0.225  Sum_probs=82.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-c-HH----HHHHcCCceE-E--eCCChh-HHHHhc------CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-S-ID----RVLAAGAEQA-V--DYSSKD-IELAIK------GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~-~~----~~~~~g~~~v-~--~~~~~~-~~~~~~------~~  237 (307)
                      .|+++||+||++++|.+.++.+...|++|+...+.. + .+    .+++.|.+.. +  |.++.+ ....+.      ++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   84 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCC
Confidence            589999999999999999999999999998765433 2 12    2445565422 2  333322 222121      68


Q ss_pred             ccEEEECCCChh-------------------------hHHHHHhcccCCcEEEEeccCccccc-ccccceechhHHHHHH
Q 021831          238 FDAVLDTIGAPE-------------------------TERLGLNFLKRGGHYMTLHGETAALA-DHYGLALGLPIATTVL  291 (307)
Q Consensus       238 ~dvvid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~  291 (307)
                      .|++|++.|...                         ....++..|+.+|.++.+........ ......+.....+...
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~~~~Y~asK~al~~  164 (259)
T d1ja9a_          85 LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEG  164 (259)
T ss_dssp             EEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHHHHHHHHHHH
T ss_pred             CcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCCchhHHHHHHHHHH
Confidence            999999998510                         13566777888888877765443222 2233333444444444


Q ss_pred             HHHH-Hhhhhcccccc
Q 021831          292 LKKR-MQTWYSYGIGC  306 (307)
Q Consensus       292 ~~~~-~~~~~~~~i~~  306 (307)
                      +-+. ...+.++||++
T Consensus       165 l~r~lA~e~~~~gIrv  180 (259)
T d1ja9a_         165 FCRAFAVDCGAKGVTV  180 (259)
T ss_dssp             HHHHHHHHHGGGTCEE
T ss_pred             HHHHHHHHHhhcCeEE
Confidence            4444 44567778875

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=98.03  E-value=4e-05  Score=64.17  Aligned_cols=133  Identities=15%  Similarity=0.225  Sum_probs=81.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHcCC---ceEE--eCCChh-HHHHhc------CCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAAGA---EQAV--DYSSKD-IELAIK------GKFD  239 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~g~---~~v~--~~~~~~-~~~~~~------~~~d  239 (307)
                      .|+.+||+||++++|++.++.+...|++|+.+.++++ .+. .++++.   ...+  |.++++ ..+.+.      +++|
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   84 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   84 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcc
Confidence            5899999999999999999999999999998876543 222 344432   2222  444432 222221      6899


Q ss_pred             EEEECCCChh---------------------------hHHHHHhcc--cCCcEEEEeccCcccccccc-cceechhHHHH
Q 021831          240 AVLDTIGAPE---------------------------TERLGLNFL--KRGGHYMTLHGETAALADHY-GLALGLPIATT  289 (307)
Q Consensus       240 vvid~~g~~~---------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~  289 (307)
                      ++|++.|...                           ....++..|  +.+|+++.++.......... ...+.....+.
T Consensus        85 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~asKaal  164 (268)
T d2bgka1          85 IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAV  164 (268)
T ss_dssp             EEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHHH
T ss_pred             eeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchhHHHH
Confidence            9999987310                           113555566  35689988886654333222 22334444444


Q ss_pred             HHHHHH-Hhhhhcccccc
Q 021831          290 VLLKKR-MQTWYSYGIGC  306 (307)
Q Consensus       290 ~~~~~~-~~~~~~~~i~~  306 (307)
                      ..+-+. ...+.++||+|
T Consensus       165 ~~lt~~lA~el~~~gIrV  182 (268)
T d2bgka1         165 LGLTTSLCTELGEYGIRV  182 (268)
T ss_dssp             HHHHHHHHHHHGGGTEEE
T ss_pred             HhCHHHHHHHhChhCeEE
Confidence            444444 45677888886

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=98.02  E-value=3.2e-05  Score=64.37  Aligned_cols=132  Identities=18%  Similarity=0.214  Sum_probs=83.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HH----HHHHcCCce---EEeCCChh-HH---HHhc---CCcc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-ID----RVLAAGAEQ---AVDYSSKD-IE---LAIK---GKFD  239 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~----~~~~~g~~~---v~~~~~~~-~~---~~~~---~~~d  239 (307)
                      |+.+||+||++++|++.++.+...|++|+...++++ .+    .+++.+...   ..|.++.+ ..   +.+.   ++.|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            566799999999999999999999999988877643 22    234455432   22444432 22   2221   6899


Q ss_pred             EEEECCCChh-------------------------hHHHHHhcc----cCCcEEEEeccCcccccccccceechhHHHHH
Q 021831          240 AVLDTIGAPE-------------------------TERLGLNFL----KRGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       240 vvid~~g~~~-------------------------~~~~~~~~l----~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      ++|++.|...                         ....++..+    +..|+++.++.............++....+..
T Consensus        82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal~  161 (257)
T d2rhca1          82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVV  161 (257)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHHHH
Confidence            9999988510                         013344432    23488999887766554445555556565565


Q ss_pred             HHHHHHh-hhhcccccc
Q 021831          291 LLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~-~~~~~~i~~  306 (307)
                      .+-+.+. .+.++||+|
T Consensus       162 ~ltk~lA~el~~~gIrV  178 (257)
T d2rhca1         162 GFTKALGLELARTGITV  178 (257)
T ss_dssp             HHHHHHHHHTTTSEEEE
T ss_pred             HHHHHHHHHhhhhCcEE
Confidence            5555555 567778886

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=98.00  E-value=2.5e-05  Score=65.75  Aligned_cols=133  Identities=20%  Similarity=0.186  Sum_probs=84.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HH-HHHHcCCce---EEeCCChh-HHHHhc------CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-ID-RVLAAGAEQ---AVDYSSKD-IELAIK------GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~-~~~~~g~~~---v~~~~~~~-~~~~~~------~~~dvv  241 (307)
                      .|+++||+||++++|+++++.+...|++|+.+.++++ .+ ..++++...   ..|.++.+ ..+.+.      +.+|++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil   83 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL   83 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence            5899999999999999999999999999999877643 22 244555432   22444432 222211      689999


Q ss_pred             EECCCCh-----------h----hH---------------HHHHhcc-cCCcEEEEeccCcccccccccceechhHHHHH
Q 021831          242 LDTIGAP-----------E----TE---------------RLGLNFL-KRGGHYMTLHGETAALADHYGLALGLPIATTV  290 (307)
Q Consensus       242 id~~g~~-----------~----~~---------------~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  290 (307)
                      +++.|..           +    .+               ..++..| +.+|.+|.++.............+.....+..
T Consensus        84 vnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~~~~~Y~asKaal~  163 (276)
T d1bdba_          84 IPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIV  163 (276)
T ss_dssp             ECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTSSCHHHHHHHHHHH
T ss_pred             cccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCCCCchHHHHHHHHH
Confidence            9998731           0    01               2334444 45688888876655444445555666666666


Q ss_pred             HHHHHHhhhhcccccc
Q 021831          291 LLKKRMQTWYSYGIGC  306 (307)
Q Consensus       291 ~~~~~~~~~~~~~i~~  306 (307)
                      .+-+.+.....++|+|
T Consensus       164 ~ltr~lA~ela~~IrV  179 (276)
T d1bdba_         164 GLVRELAFELAPYVRV  179 (276)
T ss_dssp             HHHHHHHHHHTTTCEE
T ss_pred             HHHHHHHHHhhcceEE
Confidence            6666666444455765

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.00  E-value=4.3e-05  Score=62.80  Aligned_cols=130  Identities=15%  Similarity=0.201  Sum_probs=82.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChh-HHH---Hhc---CCccEEEECCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD-IEL---AIK---GKFDAVLDTIG  246 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~---~~~---~~~dvvid~~g  246 (307)
                      .|+++||+||++++|.+.++.+...|++|+.+.++++..  ++. .....|.++.+ ..+   .+.   +++|++|+++|
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--~~~-~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG   82 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP--KGL-FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAG   82 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC--TTS-EEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh--cCc-eEEEEecCCHHHHHHHHHHHHHhcCCceEEEeeec
Confidence            589999999999999999999999999999987654321  010 11223444432 222   221   68999999988


Q ss_pred             Chh-------------------------hHHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHHHHHHHHh-h
Q 021831          247 APE-------------------------TERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ-T  298 (307)
Q Consensus       247 ~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  298 (307)
                      ...                         ....++..+  +.+|++|.++.............++....+...+.+.+. .
T Consensus        83 ~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e  162 (237)
T d1uzma1          83 LSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARE  162 (237)
T ss_dssp             CCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHHHHHHHHHHHhh
Confidence            410                         013344444  356799999987665555555556666666665555554 5


Q ss_pred             hhcccccc
Q 021831          299 WYSYGIGC  306 (307)
Q Consensus       299 ~~~~~i~~  306 (307)
                      +.++||+|
T Consensus       163 ~~~~gIrV  170 (237)
T d1uzma1         163 LSKANVTA  170 (237)
T ss_dssp             HGGGTEEE
T ss_pred             hhcCCcee
Confidence            67788886

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=97.99  E-value=2.5e-05  Score=64.39  Aligned_cols=132  Identities=20%  Similarity=0.235  Sum_probs=83.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HHHHHcCCceE---EeCCChh-HHH---Hhc---CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQA---VDYSSKD-IEL---AIK---GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~~~~~g~~~v---~~~~~~~-~~~---~~~---~~~dvv  241 (307)
                      .|+++||+||++++|.+.++-+...|++|+.+.++.+.  +..++++.+..   .|.++++ ..+   .+.   +++|++
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL   83 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   83 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence            58999999999999999999999999999998776542  23556665422   2344332 222   222   689999


Q ss_pred             EECCCChh-------------------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHHHHHHHHHHH
Q 021831          242 LDTIGAPE-------------------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM  296 (307)
Q Consensus       242 id~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (307)
                      |++.|...                         ....++..++.++.++..+....... .....++....+...+-+.+
T Consensus        84 innAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~-~~~~~Y~~sK~al~~lt~~l  162 (241)
T d2a4ka1          84 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA-FGLAHYAAGKLGVVGLARTL  162 (241)
T ss_dssp             EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH-HHHHHHHHCSSHHHHHHHHH
T ss_pred             ccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccc-cCccccchhhHHHHHHHHHH
Confidence            99877410                         12455667778888777766544222 22223444444444444444


Q ss_pred             h-hhhcccccc
Q 021831          297 Q-TWYSYGIGC  306 (307)
Q Consensus       297 ~-~~~~~~i~~  306 (307)
                      . .+..+||++
T Consensus       163 A~el~~~gIrv  173 (241)
T d2a4ka1         163 ALELARKGVRV  173 (241)
T ss_dssp             HHHHTTTTCEE
T ss_pred             HHHHhHhCCEE
Confidence            4 557777875

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=2.5e-05  Score=64.61  Aligned_cols=133  Identities=17%  Similarity=0.241  Sum_probs=84.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHH-HcCCc-eEEeCCChhHHHHhc---CCccEEEECCCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVL-AAGAE-QAVDYSSKDIELAIK---GKFDAVLDTIGA  247 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~-~~g~~-~v~~~~~~~~~~~~~---~~~dvvid~~g~  247 (307)
                      .|+++||.||++++|.+.++.+...|++|+.+.++++ .+.+. ..+.. .+.|.+..+..+...   ++.|+++++.|.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag~   84 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGF   84 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEecccc
Confidence            5899999999999999999999999999999977643 22222 23322 233444444333332   689999999885


Q ss_pred             hh----------h---------------HHHHHhcc--cCCcEEEEeccCccc-ccccccceechhHHHHHHHHHHHh-h
Q 021831          248 PE----------T---------------ERLGLNFL--KRGGHYMTLHGETAA-LADHYGLALGLPIATTVLLKKRMQ-T  298 (307)
Q Consensus       248 ~~----------~---------------~~~~~~~l--~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~  298 (307)
                      ..          .               ...++..+  +++|+++.++..... ........++....+...+-+.+. .
T Consensus        85 ~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~~l~r~lA~e  164 (245)
T d2ag5a1          85 VHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAAD  164 (245)
T ss_dssp             CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHHHHHHHHHHHHH
Confidence            10          0               12333333  467899999876442 223333445555555555555544 6


Q ss_pred             hhcccccc
Q 021831          299 WYSYGIGC  306 (307)
Q Consensus       299 ~~~~~i~~  306 (307)
                      +.++||++
T Consensus       165 ~~~~gIrv  172 (245)
T d2ag5a1         165 FIQQGIRC  172 (245)
T ss_dssp             HGGGTEEE
T ss_pred             hhhhCcEE
Confidence            77888886

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.98  E-value=3.8e-05  Score=64.48  Aligned_cols=133  Identities=17%  Similarity=0.273  Sum_probs=79.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCC--c----eEEeCCChh-HHH---Hhc---
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGA--E----QAVDYSSKD-IEL---AIK---  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~--~----~v~~~~~~~-~~~---~~~---  235 (307)
                      .|+++||+||++++|.+.++.+...|++|+.+.++++ .+.    +++.+.  .    ...|.++.+ ..+   .+.   
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   83 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   83 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4889999999999999999999999999999877643 222    233332  1    223444432 222   221   


Q ss_pred             CCccEEEECCCCh----------h----hH---------------HHHHhccc-CCcEEEEecc-Ccccccccccceech
Q 021831          236 GKFDAVLDTIGAP----------E----TE---------------RLGLNFLK-RGGHYMTLHG-ETAALADHYGLALGL  284 (307)
Q Consensus       236 ~~~dvvid~~g~~----------~----~~---------------~~~~~~l~-~~G~~v~~g~-~~~~~~~~~~~~~~~  284 (307)
                      +++|++|++.|..          +    .+               ..++..|+ .+|.+|.+.. ............++.
T Consensus        84 g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~Y~a  163 (272)
T d1xkqa_          84 GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAI  163 (272)
T ss_dssp             SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHHHH
T ss_pred             CCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcchhhh
Confidence            6899999998741          0    01               23444442 3455555554 333333334444555


Q ss_pred             hHHHHHHHHHHHh-hhhcccccc
Q 021831          285 PIATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       285 ~~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ...+...+-+.+. .+.++||+|
T Consensus       164 sKaal~~ltk~lA~el~~~gIrV  186 (272)
T d1xkqa_         164 AKAALDQYTRSTAIDLAKFGIRV  186 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEE
T ss_pred             HHHHHHHHHHHHHHHhcccCeEE
Confidence            5555555555544 667888886

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=0.00012  Score=60.79  Aligned_cols=133  Identities=18%  Similarity=0.227  Sum_probs=80.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc-eE----EeCCChh-HHH---Hhc---C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE-QA----VDYSSKD-IEL---AIK---G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~-~v----~~~~~~~-~~~---~~~---~  236 (307)
                      +|+++||+||++++|.+.++.+.+.|++|+.+.++.+ .+.    +++.+.. .+    .|.++++ ..+   .+.   +
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g   88 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS   88 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999999999999988876643 222    3344421 22    2444432 222   221   7


Q ss_pred             CccEEEECCCChh-------------------------hHHHHHhcc----cCCcEEEEeccCccccc--ccccceechh
Q 021831          237 KFDAVLDTIGAPE-------------------------TERLGLNFL----KRGGHYMTLHGETAALA--DHYGLALGLP  285 (307)
Q Consensus       237 ~~dvvid~~g~~~-------------------------~~~~~~~~l----~~~G~~v~~g~~~~~~~--~~~~~~~~~~  285 (307)
                      ++|++|++.|...                         ....+++.+    ..+|++|.++.......  ......++..
T Consensus        89 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y~~s  168 (257)
T d1xg5a_          89 GVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSAT  168 (257)
T ss_dssp             CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHHH
T ss_pred             CCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHHHHH
Confidence            8999999988510                         012333333    23699999987654322  2222334555


Q ss_pred             HHHHHHHHHHHhh-h--hcccccc
Q 021831          286 IATTVLLKKRMQT-W--YSYGIGC  306 (307)
Q Consensus       286 ~~~~~~~~~~~~~-~--~~~~i~~  306 (307)
                      ..+...+.+.+.. +  ..++|++
T Consensus       169 Kaal~~ltr~la~el~~~~~~I~v  192 (257)
T d1xg5a_         169 KYAVTALTEGLRQELREAQTHIRA  192 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCEE
T ss_pred             HHHHHhCHHHHHHHHHhCCCCEEE
Confidence            5555555555543 2  4678875

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.95  E-value=4.6e-05  Score=63.19  Aligned_cols=131  Identities=15%  Similarity=0.056  Sum_probs=83.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHH----cCCceEEeCCC-hhHHHHhc---CCccEEEECCC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLA----AGAEQAVDYSS-KDIELAIK---GKFDAVLDTIG  246 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~----~g~~~v~~~~~-~~~~~~~~---~~~dvvid~~g  246 (307)
                      .+.||+||++++|++.++.+...|++|+...++. +.+.+++    .....+.+..+ ..+.+.+.   ++.|++|++.|
T Consensus         1 ~TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg   80 (252)
T d1zmta1           1 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI   80 (252)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            3789999999999999999999999998886543 3333332    22333333322 12223222   78999998876


Q ss_pred             Ch-h-------------------------hHHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHHHHHHHh-
Q 021831          247 AP-E-------------------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ-  297 (307)
Q Consensus       247 ~~-~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  297 (307)
                      .. .                         ....++..|+  .+|++|.++.............+.....+...+-+.+. 
T Consensus        81 ~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~  160 (252)
T d1zmta1          81 FAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSK  160 (252)
T ss_dssp             CCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHHHHHHHH
Confidence            31 0                         0134455553  46999999987765555555555666666655555554 


Q ss_pred             hhhcccccc
Q 021831          298 TWYSYGIGC  306 (307)
Q Consensus       298 ~~~~~~i~~  306 (307)
                      .+.++||+|
T Consensus       161 ela~~gIrV  169 (252)
T d1zmta1         161 ELGEYNIPV  169 (252)
T ss_dssp             HHGGGTCCE
T ss_pred             HhcccCcEE
Confidence            667888886

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=97.93  E-value=5.5e-05  Score=62.82  Aligned_cols=133  Identities=14%  Similarity=0.124  Sum_probs=83.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHH---H-HcCCce----EEeCC-Ch-hHHHHhc------C
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRV---L-AAGAEQ----AVDYS-SK-DIELAIK------G  236 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~---~-~~g~~~----v~~~~-~~-~~~~~~~------~  236 (307)
                      .|.+|||+||++++|++++......|++|+.+.+. ++...+   + ..+...    ..|.+ +. +..+.+.      +
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g   83 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence            48999999999999999999999999988877544 343322   2 223221    22332 21 2222221      6


Q ss_pred             CccEEEECCCChh-----------------hHHHHHhccc-----CCcEEEEeccCcccccccccceechhHHHHHHHHH
Q 021831          237 KFDAVLDTIGAPE-----------------TERLGLNFLK-----RGGHYMTLHGETAALADHYGLALGLPIATTVLLKK  294 (307)
Q Consensus       237 ~~dvvid~~g~~~-----------------~~~~~~~~l~-----~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (307)
                      ++|++|+++|...                 ....++..|.     .+|++|.++.............++....+...+.+
T Consensus        84 ~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~~t~  163 (254)
T d1sbya1          84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTN  163 (254)
T ss_dssp             CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHHHHHHHHHHHHH
Confidence            8999999999621                 1234444452     35899999877665444444555666666666655


Q ss_pred             HHh-hhhcccccc
Q 021831          295 RMQ-TWYSYGIGC  306 (307)
Q Consensus       295 ~~~-~~~~~~i~~  306 (307)
                      .+. .+.++||++
T Consensus       164 ~la~el~~~gIrV  176 (254)
T d1sbya1         164 SLAKLAPITGVTA  176 (254)
T ss_dssp             HHHHHHHHHSEEE
T ss_pred             HHHhhccccCeEE
Confidence            555 445668876

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=97.92  E-value=0.0001  Score=60.98  Aligned_cols=133  Identities=19%  Similarity=0.239  Sum_probs=82.9

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCceEEeCCChhH---HH---Hhc---CC
Q 021831          174 EGQRLLVLGGGG--AVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAEQAVDYSSKDI---EL---AIK---GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g--~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~~v~~~~~~~~---~~---~~~---~~  237 (307)
                      .|+++||+||+|  ++|.+++..+...|++|+...++++. +.    ....+.......+..+.   ..   ...   +.
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   83 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccc
Confidence            589999999988  78899999999999999888766542 22    23344444443333221   11   111   57


Q ss_pred             ccEEEECCCChh------------------------------hHHHHHhcccCCcEEEEeccCcccccccccceechhHH
Q 021831          238 FDAVLDTIGAPE------------------------------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIA  287 (307)
Q Consensus       238 ~dvvid~~g~~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  287 (307)
                      .|+.+++.+...                              ....+...+++++.++.++.............+.....
T Consensus        84 ~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~~~Y~~sKa  163 (258)
T d1qsga_          84 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKA  163 (258)
T ss_dssp             EEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHHHH
T ss_pred             cceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCcHHHHHHHH
Confidence            899999876410                              01344556677888888887655444444444555555


Q ss_pred             HHHHHHHH-Hhhhhcccccc
Q 021831          288 TTVLLKKR-MQTWYSYGIGC  306 (307)
Q Consensus       288 ~~~~~~~~-~~~~~~~~i~~  306 (307)
                      +...+.+. ...|.++||++
T Consensus       164 al~~ltr~lA~el~~~gIrV  183 (258)
T d1qsga_         164 SLEANVRYMANAMGPEGVRV  183 (258)
T ss_dssp             HHHHHHHHHHHHHTTTTEEE
T ss_pred             HHHHHHHHHHHHhCccCcee
Confidence            55544444 44777788885

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=7.1e-05  Score=61.73  Aligned_cols=133  Identities=18%  Similarity=0.174  Sum_probs=84.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCc---eEEeCCChhH-HHHhc------CCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE---QAVDYSSKDI-ELAIK------GKF  238 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~---~v~~~~~~~~-~~~~~------~~~  238 (307)
                      .|+.+||+||++++|...+..+...|++|+...++++. +.    +++.|..   ...|.++.+- .+.+.      +..
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i   85 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV   85 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            58999999999999999988888999999998776542 21    3445543   2234444322 22121      679


Q ss_pred             cEEEECCCChh-------------------------hHHHHHhccc--CCcEEEEeccCcccccccccceechhHHHHHH
Q 021831          239 DAVLDTIGAPE-------------------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATTVL  291 (307)
Q Consensus       239 dvvid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  291 (307)
                      |++|++.|...                         ....++..|.  ..|++|.++.............+.....++.-
T Consensus        86 dilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~  165 (244)
T d1yb1a_          86 SILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVG  165 (244)
T ss_dssp             SEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHHHH
T ss_pred             ceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHHHHHHH
Confidence            99999998510                         1234555553  35899999988765554444445555555555


Q ss_pred             HHHHHhhh-hc---ccccc
Q 021831          292 LKKRMQTW-YS---YGIGC  306 (307)
Q Consensus       292 ~~~~~~~~-~~---~~i~~  306 (307)
                      +-+.+... ..   +||++
T Consensus       166 ~~~~La~El~~~~~~gI~V  184 (244)
T d1yb1a_         166 FHKTLTDELAALQITGVKT  184 (244)
T ss_dssp             HHHHHHHHHHHTTCTTEEE
T ss_pred             HHHHHHHHHHhhcCCCEEE
Confidence            55555432 22   46664

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.88  E-value=8.8e-05  Score=62.74  Aligned_cols=133  Identities=15%  Similarity=0.273  Sum_probs=79.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-----HHHcCCc-eEE--eCCChhHHHH-h---c---CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-----VLAAGAE-QAV--DYSSKDIELA-I---K---GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-----~~~~g~~-~v~--~~~~~~~~~~-~---~---~~  237 (307)
                      .|+++||+||++++|.++++.+...|++|+.+.++.+. +.     ..+.+.. ..+  |..+.+-.+. .   .   ++
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  103 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  103 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccc
Confidence            47999999999999999999999999999998776532 11     2233433 233  3333322111 1   1   68


Q ss_pred             ccEEEECCCChhh-------------------------HHH-HH--hcccCCcEEEEeccCcccccccccceechhHHHH
Q 021831          238 FDAVLDTIGAPET-------------------------ERL-GL--NFLKRGGHYMTLHGETAALADHYGLALGLPIATT  289 (307)
Q Consensus       238 ~dvvid~~g~~~~-------------------------~~~-~~--~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  289 (307)
                      +|+++++.|....                         ... +.  ..-..+|.++................+.....+.
T Consensus       104 iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~YsasKaal  183 (294)
T d1w6ua_         104 PNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGV  183 (294)
T ss_dssp             CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             cchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHHHHHH
Confidence            9999999885100                         011 11  1223456667666655443444444445555555


Q ss_pred             HHHHHHHh-hhhcccccc
Q 021831          290 VLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       290 ~~~~~~~~-~~~~~~i~~  306 (307)
                      ..+-+.+. .+.++||+|
T Consensus       184 ~~ltk~lA~ela~~gIrV  201 (294)
T d1w6ua_         184 EAMSKSLAAEWGKYGMRF  201 (294)
T ss_dssp             HHHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHHhHhCeEE
Confidence            55555544 667788886

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.87  E-value=0.00012  Score=60.70  Aligned_cols=130  Identities=18%  Similarity=0.231  Sum_probs=80.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H----HHHHcCCceE---EeCCChh----HHHHhc---CCccEE
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQA---VDYSSKD----IELAIK---GKFDAV  241 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~----~~~~~g~~~v---~~~~~~~----~~~~~~---~~~dvv  241 (307)
                      .+||+||++++|++.++.+...|++|+...++++. +    .+++.|.+..   .|.++++    +.+.+.   +++|++
T Consensus         3 ValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVI   82 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEE
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            35999999999999999888899999888776432 2    2344554322   2444432    222221   689999


Q ss_pred             EECCCChh-------------------------hHHHHHhcc---cCCcEEEEeccCcccccccccceechhHHHHHHHH
Q 021831          242 LDTIGAPE-------------------------TERLGLNFL---KRGGHYMTLHGETAALADHYGLALGLPIATTVLLK  293 (307)
Q Consensus       242 id~~g~~~-------------------------~~~~~~~~l---~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  293 (307)
                      |++.|...                         ....++..+   +.+|+++.++.............++....+...+-
T Consensus        83 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt  162 (255)
T d1gega_          83 VNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLT  162 (255)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred             EecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHhhH
Confidence            99988410                         012334332   24578888887655444444444555555555555


Q ss_pred             HHHh-hhhcccccc
Q 021831          294 KRMQ-TWYSYGIGC  306 (307)
Q Consensus       294 ~~~~-~~~~~~i~~  306 (307)
                      +.+. .+.++||+|
T Consensus       163 k~lA~el~~~gIrV  176 (255)
T d1gega_         163 QTAARDLAPLGITV  176 (255)
T ss_dssp             HHHHHHHGGGTEEE
T ss_pred             HHHHHHhhhhCcEE
Confidence            5544 567778876

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=6.1e-05  Score=64.02  Aligned_cols=132  Identities=18%  Similarity=0.205  Sum_probs=77.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHc--------CCce---EEeCCChh-HHH---Hhc-
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAA--------GAEQ---AVDYSSKD-IEL---AIK-  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~--------g~~~---v~~~~~~~-~~~---~~~-  235 (307)
                      .|+++||+||++++|.++++.+...|++|+.+.++.+ .+. ++++        +...   ..|.++.+ ..+   .+. 
T Consensus        11 ~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   90 (297)
T d1yxma1          11 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   90 (297)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999877643 222 2221        2221   12444432 222   221 


Q ss_pred             --CCccEEEECCCChh-------------------------hHHHHHhccc--CCcEEEEeccCcccccccccceechhH
Q 021831          236 --GKFDAVLDTIGAPE-------------------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPI  286 (307)
Q Consensus       236 --~~~dvvid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~  286 (307)
                        ++.|++|++.|...                         ....++..|.  .+|.++.+..... ........++...
T Consensus        91 ~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~-~~~~~~~~Y~asK  169 (297)
T d1yxma1          91 TFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTK-AGFPLAVHSGAAR  169 (297)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCT-TCCTTCHHHHHHH
T ss_pred             HhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccc-ccccccccchhHH
Confidence              68999999988410                         1133444442  4577776654322 2222333333444


Q ss_pred             HHHHHHHHH-Hhhhhcccccc
Q 021831          287 ATTVLLKKR-MQTWYSYGIGC  306 (307)
Q Consensus       287 ~~~~~~~~~-~~~~~~~~i~~  306 (307)
                      .+...+.+. ...+.++||+|
T Consensus       170 aal~~ltk~lA~el~~~gIrV  190 (297)
T d1yxma1         170 AGVYNLTKSLALEWACSGIRI  190 (297)
T ss_dssp             HHHHHHHHHHHHHTGGGTEEE
T ss_pred             HHHHHHHHHHHHHhcccCceE
Confidence            444444444 44667788886

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.87  E-value=7.5e-05  Score=62.28  Aligned_cols=133  Identities=17%  Similarity=0.263  Sum_probs=79.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc----e--EEeCCChh-HHHHhc------
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE----Q--AVDYSSKD-IELAIK------  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~----~--v~~~~~~~-~~~~~~------  235 (307)
                      .|+.+||+||++++|.+.++.+...|++|+.+.++++ .+.    +++.+..    .  ..|.++.+ ..+.+.      
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   83 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5889999999999999999999999999998877643 222    2333321    1  22444432 222221      


Q ss_pred             CCccEEEECCCCh--------------hh---------------HHHHHhccc-CCcEEEEeccCc-ccccccccceech
Q 021831          236 GKFDAVLDTIGAP--------------ET---------------ERLGLNFLK-RGGHYMTLHGET-AALADHYGLALGL  284 (307)
Q Consensus       236 ~~~dvvid~~g~~--------------~~---------------~~~~~~~l~-~~G~~v~~g~~~-~~~~~~~~~~~~~  284 (307)
                      +++|++|++.|..              +.               ...++..|+ .+|.+|.+.... ..........++.
T Consensus        84 g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~~~~Y~a  163 (264)
T d1spxa_          84 GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSI  163 (264)
T ss_dssp             SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSHHHHH
T ss_pred             CCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCCchhhhh
Confidence            6899999998741              01               134445554 346666655543 3333333344555


Q ss_pred             hHHHHHHHHHHHh-hhhcccccc
Q 021831          285 PIATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       285 ~~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      ...+...+-+.+. .+.++||+|
T Consensus       164 sKaal~~lt~~lA~el~~~gIrV  186 (264)
T d1spxa_         164 AKAAIDQYTRNTAIDLIQHGIRV  186 (264)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             hhhhHHHHHHHHHHHhcccCeEE
Confidence            5555555555544 667788886

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=9.1e-05  Score=61.91  Aligned_cols=133  Identities=16%  Similarity=0.187  Sum_probs=83.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHH----H-HcCCc-eEEe--CCChhHHH----Hhc---CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRV----L-AAGAE-QAVD--YSSKDIEL----AIK---GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~----~-~~g~~-~v~~--~~~~~~~~----~~~---~~  237 (307)
                      +|.++||+||++++|++.++.+...|++|+.+.++++ .+.+    . ..+.. ..+.  ........    .+.   +.
T Consensus        13 ~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~   92 (269)
T d1xu9a_          13 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG   92 (269)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCC
Confidence            5899999999999999999999999999999987654 2221    1 22322 2222  22222111    111   67


Q ss_pred             ccEEEECCCChh-------------------------hHHHHHhcc-cCCcEEEEeccCcccccccccceechhHHHHHH
Q 021831          238 FDAVLDTIGAPE-------------------------TERLGLNFL-KRGGHYMTLHGETAALADHYGLALGLPIATTVL  291 (307)
Q Consensus       238 ~dvvid~~g~~~-------------------------~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  291 (307)
                      .|+++++.|...                         ....++..| +.+|+++.++.............++....+...
T Consensus        93 ~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~~~~Y~asKaal~~  172 (269)
T d1xu9a_          93 LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDG  172 (269)
T ss_dssp             CSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCCchHHHHHHHHHHH
Confidence            899999877410                         113344444 357999999987765555555666666666666


Q ss_pred             HHHHHhhhh-c--ccccc
Q 021831          292 LKKRMQTWY-S--YGIGC  306 (307)
Q Consensus       292 ~~~~~~~~~-~--~~i~~  306 (307)
                      +-+.+.... .  ++|+|
T Consensus       173 ~~~~La~El~~~~~~I~V  190 (269)
T d1xu9a_         173 FFSSIRKEYSVSRVNVSI  190 (269)
T ss_dssp             HHHHHHHHHHHHTCCCEE
T ss_pred             HHHHHHHHhhhcCCCEEE
Confidence            666665432 2  35664

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=97.76  E-value=9.9e-05  Score=60.65  Aligned_cols=130  Identities=18%  Similarity=0.213  Sum_probs=80.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCE-------EEEEeCCcc-HHH----HHHcCCce-E--EeCCChh-HH---HHhc--
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCH-------VSATCGSKS-IDR----VLAAGAEQ-A--VDYSSKD-IE---LAIK--  235 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~-------Vi~~~~~~~-~~~----~~~~g~~~-v--~~~~~~~-~~---~~~~--  235 (307)
                      -|||+||++++|++.+..+...|++       |+...++++ .+.    +++.|... .  .|.++.+ ..   +.+.  
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3689999999999998888888886       555555543 222    23344432 2  2444432 22   2221  


Q ss_pred             -CCccEEEECCCCh----------h---------------hHHHHHhccc--CCcEEEEeccCcccccccccceechhHH
Q 021831          236 -GKFDAVLDTIGAP----------E---------------TERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIA  287 (307)
Q Consensus       236 -~~~dvvid~~g~~----------~---------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~  287 (307)
                       +.+|++|++.|..          +               ....++..|+  .+|++|.++.............+.....
T Consensus        83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK~  162 (240)
T d2bd0a1          83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKF  162 (240)
T ss_dssp             TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHHHH
Confidence             6899999998851          0               1245566663  5799999987766544444445555555


Q ss_pred             HHHHHHHHHh-hhhcccccc
Q 021831          288 TTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       288 ~~~~~~~~~~-~~~~~~i~~  306 (307)
                      +...+.+.+. .+..+||++
T Consensus       163 al~~lt~~la~el~~~gIrv  182 (240)
T d2bd0a1         163 GQRGLVETMRLYARKCNVRI  182 (240)
T ss_dssp             HHHHHHHHHHHHHTTTTEEE
T ss_pred             HHHHHHHHHHHHhCcCCeEE
Confidence            5555555544 556778875

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=97.75  E-value=0.00022  Score=59.44  Aligned_cols=133  Identities=17%  Similarity=0.179  Sum_probs=78.6

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCccH-HHH---H-HcCCceEE--eCCChh-HHHHh---c---CC
Q 021831          174 EGQRLLVLGGGG--AVGFAAVQFSVASGCHVSATCGSKSI-DRV---L-AAGAEQAV--DYSSKD-IELAI---K---GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g--~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~---~-~~g~~~v~--~~~~~~-~~~~~---~---~~  237 (307)
                      +|+++||+||+|  ++|.+.++.+...|++|+.+.++++. +.+   . +.+...++  +...+. ..+.+   .   +.
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~   83 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   83 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCC
Confidence            489999999866  79999999999999999988776542 222   2 22222333  333322 21111   1   68


Q ss_pred             ccEEEECCCChhh-----------------------------HHHHHhcccCCcEEEEeccCcccccccccceechhHHH
Q 021831          238 FDAVLDTIGAPET-----------------------------ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIAT  288 (307)
Q Consensus       238 ~dvvid~~g~~~~-----------------------------~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~  288 (307)
                      +|+++++.|....                             ........++++.++..+.............++....+
T Consensus        84 id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~~~y~asK~a  163 (274)
T d2pd4a1          84 LDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAA  163 (274)
T ss_dssp             EEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHHHHH
T ss_pred             CCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccccchhhhHHHHH
Confidence            9999999874110                             12222334555666666665544444444444555555


Q ss_pred             HHHHHHHH-hhhhcccccc
Q 021831          289 TVLLKKRM-QTWYSYGIGC  306 (307)
Q Consensus       289 ~~~~~~~~-~~~~~~~i~~  306 (307)
                      ...+.+.+ ..+..+||++
T Consensus       164 l~~ltr~lA~e~~~~GIrv  182 (274)
T d2pd4a1         164 LESAVRYLAVDLGKHHIRV  182 (274)
T ss_dssp             HHHHHHHHHHHHHTTTCEE
T ss_pred             HHHHHHhhHHHhcCcCcee
Confidence            55555444 4567778875

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.74  E-value=2.4e-05  Score=63.33  Aligned_cols=107  Identities=21%  Similarity=0.215  Sum_probs=73.5

Q ss_pred             hHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-----HHHHHHcCCceEEeCCChhHHH
Q 021831          158 AALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-----IDRVLAAGAEQAVDYSSKDIEL  232 (307)
Q Consensus       158 ~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-----~~~~~~~g~~~v~~~~~~~~~~  232 (307)
                      +...|. .+ +..++++|++||.+|  ++.|..++.+++..|.+|+++...++     ...++++|.+.+.....+-...
T Consensus        64 P~~~a~-ml-~~L~l~~g~~VLeIG--sGsGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g  139 (215)
T d1jg1a_          64 PHMVAI-ML-EIANLKPGMNILEVG--TGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG  139 (215)
T ss_dssp             HHHHHH-HH-HHHTCCTTCCEEEEC--CTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC
T ss_pred             hhhHHH-HH-HhhccCccceEEEec--CCCChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccC
Confidence            444343 34 477999999999999  56799999999888888888866543     2335677766543322211111


Q ss_pred             -HhcCCccEEEECCCChhhHHHHHhcccCCcEEEEec
Q 021831          233 -AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       233 -~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g  268 (307)
                       ...+.||.|+-+.+....-..++..|++||+++..=
T Consensus       140 ~~~~~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~pv  176 (215)
T d1jg1a_         140 FPPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPV  176 (215)
T ss_dssp             CGGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             CcccCcceeEEeecccccCCHHHHHhcCCCCEEEEEE
Confidence             112579999887776645577899999999998853

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=97.73  E-value=0.00024  Score=58.90  Aligned_cols=74  Identities=22%  Similarity=0.365  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-----HHHcCCce---EEeCCChh-HHHHh---c---CC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-----VLAAGAEQ---AVDYSSKD-IELAI---K---GK  237 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-----~~~~g~~~---v~~~~~~~-~~~~~---~---~~  237 (307)
                      .|+++||+||++++|.+.++.+...|++|+.+.++.+ ...     .++.|.+.   ..|.++++ ..+.+   .   ++
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4889999999999999999999999999999876543 221     23345432   23444432 22222   1   68


Q ss_pred             ccEEEECCCC
Q 021831          238 FDAVLDTIGA  247 (307)
Q Consensus       238 ~dvvid~~g~  247 (307)
                      +|++|++.|.
T Consensus        88 iDilVnnAg~   97 (260)
T d1h5qa_          88 ISGLIANAGV   97 (260)
T ss_dssp             EEEEEECCCC
T ss_pred             CcEecccccc
Confidence            9999999874

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.70  E-value=0.00014  Score=56.61  Aligned_cols=98  Identities=23%  Similarity=0.219  Sum_probs=70.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCccHHHHHHcCCceEEeC--CCh------------------hHHH
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKSIDRVLAAGAEQAVDY--SSK------------------DIEL  232 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~-~~~~~~~~~~~~g~~~v~~~--~~~------------------~~~~  232 (307)
                      +.-+|+|+|+ |..|+.++..|+.+|++|.+. .+.++++.+++++...+.-.  ...                  ...+
T Consensus        28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            3568999996 999999999999999999999 56677888998886544110  000                  0011


Q ss_pred             Hhc---CCccEEEECCCCh------hhHHHHHhcccCCcEEEEeccCcc
Q 021831          233 AIK---GKFDAVLDTIGAP------ETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       233 ~~~---~~~dvvid~~g~~------~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      .+.   ...|+||-++--+      -.-+..++.|+||..+|++.....
T Consensus       107 ~l~~~l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidqG  155 (183)
T d1l7da1         107 AVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAG  155 (183)
T ss_dssp             HHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGT
T ss_pred             HHHHHHHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecCC
Confidence            111   4689999986321      133778999999999999986543

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.69  E-value=0.0001  Score=56.62  Aligned_cols=97  Identities=18%  Similarity=0.272  Sum_probs=69.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe-CCccHHHHHHcCC--ceEEeCCChhHHHHhcCCccEEEECCCCh--
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC-GSKSIDRVLAAGA--EQAVDYSSKDIELAIKGKFDAVLDTIGAP--  248 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~-~~~~~~~~~~~g~--~~v~~~~~~~~~~~~~~~~dvvid~~g~~--  248 (307)
                      +..+|+|+|+ |..|+.+++.|+.+|++|.+.. +.++++.++....  ......+...+.+.+ ..+|+||.++=-+  
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~-~~aDivI~aalipG~  108 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAV-AEADLLIGAVLVPGR  108 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHH-HTCSEEEECCCCTTS
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhh-ccCcEEEEeeecCCc
Confidence            4678999996 9999999999999999999984 4455666655432  233333333444444 4599999986421  


Q ss_pred             ----hhHHHHHhcccCCcEEEEeccCcc
Q 021831          249 ----ETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       249 ----~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                          -.-...++.|++|..+|++.-...
T Consensus       109 ~aP~lIt~~mv~~Mk~GSVIVDvaidqG  136 (168)
T d1pjca1         109 RAPILVPASLVEQMRTGSVIVDVAVDQG  136 (168)
T ss_dssp             SCCCCBCHHHHTTSCTTCEEEETTCTTC
T ss_pred             ccCeeecHHHHhhcCCCcEEEEeecCCC
Confidence                123778899999999999987654

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=0.00048  Score=56.46  Aligned_cols=133  Identities=18%  Similarity=0.151  Sum_probs=81.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-H-HHHHHcCCceE-E--eCCChhHHH----Hhc---CCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-I-DRVLAAGAEQA-V--DYSSKDIEL----AIK---GKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~-~~~~~~g~~~v-~--~~~~~~~~~----~~~---~~~dvv  241 (307)
                      +|..+||+||++++|.+.++.+...|++|+.+.++++ . ...++++.... .  +..+.+..+    .+.   ...|..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA   83 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCccccccccccccccccccccccccccccccc
Confidence            5899999999999999999999999999998866543 3 33566654322 2  222221111    111   456766


Q ss_pred             EECCCC----------------hhhH---------------HHHHhcc--------cCCcEEEEeccCccccccccccee
Q 021831          242 LDTIGA----------------PETE---------------RLGLNFL--------KRGGHYMTLHGETAALADHYGLAL  282 (307)
Q Consensus       242 id~~g~----------------~~~~---------------~~~~~~l--------~~~G~~v~~g~~~~~~~~~~~~~~  282 (307)
                      +...+.                .+.+               ..++..+        ..+|++|.++.............+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y  163 (248)
T d2o23a1          84 VNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAY  163 (248)
T ss_dssp             EECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHH
T ss_pred             ccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCchHH
Confidence            655331                0011               1122221        146899999988765555555556


Q ss_pred             chhHHHHHHHHHHHh-hhhcccccc
Q 021831          283 GLPIATTVLLKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       283 ~~~~~~~~~~~~~~~-~~~~~~i~~  306 (307)
                      +....++..+.+.+. .+.++||+|
T Consensus       164 ~asKaal~~lt~~la~e~~~~gIrv  188 (248)
T d2o23a1         164 SASKGGIVGMTLPIARDLAPIGIRV  188 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcce
Confidence            666666666666655 556778876

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.62  E-value=0.00033  Score=55.27  Aligned_cols=75  Identities=15%  Similarity=0.148  Sum_probs=55.1

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH-HHH----cC-CceEEeCCChhHHHHhcCCccEEEECC
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLA----AG-AEQAVDYSSKDIELAIKGKFDAVLDTI  245 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~-~~~----~g-~~~v~~~~~~~~~~~~~~~~dvvid~~  245 (307)
                      =+|.++||+||+|++|..+++.+...|++|+.+.++.+. +. .++    .. .....|..+.+..+...+++|++|++.
T Consensus        21 l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin~A  100 (191)
T d1luaa1          21 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAG  100 (191)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeeecC
Confidence            379999999999999999999999999999998877542 22 121    22 234456666544444447899999998


Q ss_pred             CC
Q 021831          246 GA  247 (307)
Q Consensus       246 g~  247 (307)
                      |.
T Consensus       101 g~  102 (191)
T d1luaa1         101 AI  102 (191)
T ss_dssp             CT
T ss_pred             cc
Confidence            74

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.54  E-value=0.00028  Score=58.80  Aligned_cols=99  Identities=21%  Similarity=0.237  Sum_probs=68.4

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCcc-HHH----HHHcCCceEEeCCChhHHHHhc-CCcc
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKS-IDR----VLAAGAEQAVDYSSKDIELAIK-GKFD  239 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G--~~Vi~~~~~~~-~~~----~~~~g~~~v~~~~~~~~~~~~~-~~~d  239 (307)
                      ..++++||++||=.|.  +.|.++..+|+..|  .+|+++..+++ .+.    ++.++....+.....+...... ..+|
T Consensus        97 ~~l~i~pG~~VLDiG~--GsG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d~~~~~~~~~~D  174 (266)
T d1o54a_          97 MMLDVKEGDRIIDTGV--GSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVD  174 (266)
T ss_dssp             HHTTCCTTCEEEEECC--TTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSEE
T ss_pred             HhhCCCCCCEEEECCC--CCCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEecccccccccccee
Confidence            4889999999999994  45888888998875  59999955543 333    4556653222222222222222 4689


Q ss_pred             EEEECCCCh-hhHHHHHhcccCCcEEEEec
Q 021831          240 AVLDTIGAP-ETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       240 vvid~~g~~-~~~~~~~~~l~~~G~~v~~g  268 (307)
                      .|+--.+.+ ..+..+.+.|+|||+++.+.
T Consensus       175 ~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~  204 (266)
T d1o54a_         175 ALFLDVPDPWNYIDKCWEALKGGGRFATVC  204 (266)
T ss_dssp             EEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             eeEecCCCHHHHHHHHHhhcCCCCEEEEEe
Confidence            888777775 57899999999999998764

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=0.00037  Score=58.64  Aligned_cols=129  Identities=11%  Similarity=0.085  Sum_probs=77.6

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEE---eCC-ccHH----HHHHcC---Cc-eE--EeCCChhHHH-Hh---c-CCc
Q 021831          178 LLVLGGGGAVGFAAVQFSVASGCHVSAT---CGS-KSID----RVLAAG---AE-QA--VDYSSKDIEL-AI---K-GKF  238 (307)
Q Consensus       178 VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~---~~~-~~~~----~~~~~g---~~-~v--~~~~~~~~~~-~~---~-~~~  238 (307)
                      |||+||++++|.+.+..+...|++++.+   .+. +...    .++++.   .. ..  .|.++.+-.+ .+   . +..
T Consensus         5 vlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~i   84 (285)
T d1jtva_           5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGRV   84 (285)
T ss_dssp             EEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSCC
T ss_pred             EEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccch
Confidence            5788999999999999998899975443   232 1222    123332   21 22  3444432222 22   1 579


Q ss_pred             cEEEECCCChh-------------------------hHHHHHhcc--cCCcEEEEeccCcccccccccceechhHHHHHH
Q 021831          239 DAVLDTIGAPE-------------------------TERLGLNFL--KRGGHYMTLHGETAALADHYGLALGLPIATTVL  291 (307)
Q Consensus       239 dvvid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  291 (307)
                      |+++++.|...                         ....++..|  +.+|++|.++.............++....+...
T Consensus        85 dilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~asKaal~~  164 (285)
T d1jtva_          85 DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEG  164 (285)
T ss_dssp             SEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             hhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHHHHHHHH
Confidence            99999987410                         123455556  346999999877665554444455555555555


Q ss_pred             HHHHHh-hhhcccccc
Q 021831          292 LKKRMQ-TWYSYGIGC  306 (307)
Q Consensus       292 ~~~~~~-~~~~~~i~~  306 (307)
                      +.+.+. .+..+||++
T Consensus       165 l~~~la~El~~~gIrV  180 (285)
T d1jtva_         165 LCESLAVLLLPFGVHL  180 (285)
T ss_dssp             HHHHHHHHHGGGTEEE
T ss_pred             HHHHHHHHhhccCcEE
Confidence            555555 456778876

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.43  E-value=0.0056  Score=46.42  Aligned_cols=125  Identities=17%  Similarity=0.179  Sum_probs=76.3

Q ss_pred             HHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCccH--HHHHHcCCceEEeCCChhHHHHhcCCc
Q 021831          162 AWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKF  238 (307)
Q Consensus       162 a~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~~~~~~  238 (307)
                      |.....+...--.+.+|||+|+ |.+|..+++.+...|+ +++...|+.+.  ..+++++.. +..+  .++.+.+ ..+
T Consensus        11 Av~la~~~~~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~--~~~~~~l-~~~   85 (159)
T d1gpja2          11 AVELAERELGSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRF--DELVDHL-ARS   85 (159)
T ss_dssp             HHHHHHHHHSCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCG--GGHHHHH-HTC
T ss_pred             HHHHHHHHhCCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccc--hhHHHHh-ccC
Confidence            3333333443346889999996 9999999999999999 56666766433  346777743 3333  3444444 459


Q ss_pred             cEEEECCCChh------hHHHHHhcccCCc--EEEEeccCcccc---cccccceechhHHHHHH
Q 021831          239 DAVLDTIGAPE------TERLGLNFLKRGG--HYMTLHGETAAL---ADHYGLALGLPIATTVL  291 (307)
Q Consensus       239 dvvid~~g~~~------~~~~~~~~l~~~G--~~v~~g~~~~~~---~~~~~~~~~~~~~~~~~  291 (307)
                      |+||.|++...      .+...+..-+.+.  .+++++.|+...   ....++.+.........
T Consensus        86 Divi~atss~~~ii~~~~i~~~~~~r~~~~~~~iiDlavPr~vd~~v~~~~~v~l~~ld~l~~~  149 (159)
T d1gpja2          86 DVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPRDVEEGVENIEDVEVRTIDDLRVI  149 (159)
T ss_dssp             SEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCSSCSBCTTGGGSTTEEEEEHHHHHHH
T ss_pred             CEEEEecCCCCccccHhhhHHHHHhcccCCCeEEEeecCCCCcChhhhccCCeEEEeHHHHHHH
Confidence            99999998742      2233322222222  689999887532   34445555554443333

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.40  E-value=0.00013  Score=58.73  Aligned_cols=97  Identities=23%  Similarity=0.265  Sum_probs=64.9

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCcc-HHH----HHHcCCceEEe--CCChhHHHHhcCCc
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKS-IDR----VLAAGAEQAVD--YSSKDIELAIKGKF  238 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~~~~~~-~~~----~~~~g~~~v~~--~~~~~~~~~~~~~~  238 (307)
                      +..++++|++||-+|  ++.|..++.+++..|-  +|+++...++ .+.    ++..+.+.+..  .+..+. ....+.|
T Consensus        69 ~~l~l~~g~~VLdiG--~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~-~~~~~~f  145 (213)
T d1dl5a1          69 EWVGLDKGMRVLEIG--GGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG-VPEFSPY  145 (213)
T ss_dssp             HHTTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC-CGGGCCE
T ss_pred             HhhhccccceEEEec--CccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHc-cccccch
Confidence            478899999999999  3458888899988763  8888865543 222    34445443322  111110 0112579


Q ss_pred             cEEEECCCChhhHHHHHhcccCCcEEEEe
Q 021831          239 DAVLDTIGAPETERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       239 dvvid~~g~~~~~~~~~~~l~~~G~~v~~  267 (307)
                      |+|+.+.+-....+.+++.|+|||+++..
T Consensus       146 D~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         146 DVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             EEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             hhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence            99998876654456788999999999873

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=0.00051  Score=57.31  Aligned_cols=96  Identities=20%  Similarity=0.318  Sum_probs=63.9

Q ss_pred             CCEE-EEEcCCchHHHHHHH-HHHHcCCEEEEEeCCccH-H----HHHHcCCc-eE--EeCCChh----HHHHhc---CC
Q 021831          175 GQRL-LVLGGGGAVGFAAVQ-FSVASGCHVSATCGSKSI-D----RVLAAGAE-QA--VDYSSKD----IELAIK---GK  237 (307)
Q Consensus       175 g~~V-lI~Ga~g~~G~~~~~-~a~~~G~~Vi~~~~~~~~-~----~~~~~g~~-~v--~~~~~~~----~~~~~~---~~  237 (307)
                      |.+| ||+||++++|+++++ +++..|++|+...++.+. +    .+++.+.. ..  .|.++.+    +.+.+.   ++
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            6677 899999999999876 556668999999877542 2    23444432 22  3444432    222222   68


Q ss_pred             ccEEEECCCCh-------------------------hhHHHHHhcccCCcEEEEeccC
Q 021831          238 FDAVLDTIGAP-------------------------ETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       238 ~dvvid~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      +|++|++.|..                         .....++..|+++|++|.++..
T Consensus        82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~  139 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI  139 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence            99999999851                         0135567788889999998864

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.26  E-value=0.00054  Score=57.74  Aligned_cols=103  Identities=11%  Similarity=0.048  Sum_probs=70.3

Q ss_pred             HHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-----HHHHHcCCceEEeCCChhHHHHhcCC
Q 021831          163 WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQAVDYSSKDIELAIKGK  237 (307)
Q Consensus       163 ~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-----~~~~~~g~~~v~~~~~~~~~~~~~~~  237 (307)
                      ...+.+.+++++|++||=+|  .+.|-.+..+|+..|++|++++-++++     +.+++.|....+.....+.. ...+.
T Consensus        50 ~~~~~~~l~l~~G~~VLDiG--CG~G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d~~-~~~~~  126 (291)
T d1kpia_          50 RKLALDKLNLEPGMTLLDIG--CGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWE-EFDEP  126 (291)
T ss_dssp             HHHHHHTTCCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECCGG-GCCCC
T ss_pred             HHHHHHhcCCCCCCEEEEec--CcchHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhhccc-ccccc
Confidence            44455678999999999999  457778889999999999999777653     33455665433322222221 12357


Q ss_pred             ccEEEE-----CCCC----------hhhHHHHHhcccCCcEEEEec
Q 021831          238 FDAVLD-----TIGA----------PETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       238 ~dvvid-----~~g~----------~~~~~~~~~~l~~~G~~v~~g  268 (307)
                      ||.|+.     .++.          ...+..+.+.|+|||++++-.
T Consensus       127 fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~  172 (291)
T d1kpia_         127 VDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT  172 (291)
T ss_dssp             CSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred             cceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence            998865     3443          236788999999999998643

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=97.14  E-value=0.0042  Score=50.85  Aligned_cols=133  Identities=17%  Similarity=0.147  Sum_probs=76.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCc----cH----HHHHHcCCceE---EeCCChhHHHH----h
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSK----SI----DRVLAAGAEQA---VDYSSKDIELA----I  234 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~-Vi~~~~~~----~~----~~~~~~g~~~v---~~~~~~~~~~~----~  234 (307)
                      ..+|+.++||+||++++|++.++.+...|++ |+.+.++.    ..    +.+++.|....   .|.++.+-.+.    +
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i   84 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI   84 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccc
Confidence            4688999999999999999999988888994 66555542    11    12345565322   24444322222    2


Q ss_pred             c--CCccEEEECCCChh----------h-----------HHHHHhccc--CCcEEEEeccCcccccccccceechhHHHH
Q 021831          235 K--GKFDAVLDTIGAPE----------T-----------ERLGLNFLK--RGGHYMTLHGETAALADHYGLALGLPIATT  289 (307)
Q Consensus       235 ~--~~~dvvid~~g~~~----------~-----------~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~  289 (307)
                      .  ...|.++++.|...          .           ...+.+.+.  +.|+++.++.............+.   ..+
T Consensus        85 ~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~~~~Ya---Aak  161 (259)
T d2fr1a1          85 GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYA---PGN  161 (259)
T ss_dssp             CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTH---HHH
T ss_pred             cccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcccHHHH---HHH
Confidence            2  36899999988410          0           112233332  468999888665433333332233   333


Q ss_pred             HHHHHHHhhhhcccccc
Q 021831          290 VLLKKRMQTWYSYGIGC  306 (307)
Q Consensus       290 ~~~~~~~~~~~~~~i~~  306 (307)
                      ..++.....+..+||++
T Consensus       162 a~l~~la~~~~~~Gi~v  178 (259)
T d2fr1a1         162 AYLDGLAQQRRSDGLPA  178 (259)
T ss_dssp             HHHHHHHHHHHHTTCCC
T ss_pred             HhHHHHHHHHHhCCCCE
Confidence            34444444555666654

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=97.04  E-value=0.0004  Score=56.84  Aligned_cols=101  Identities=21%  Similarity=0.210  Sum_probs=68.1

Q ss_pred             HHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc---eEEeCCChhHHHHh
Q 021831          163 WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE---QAVDYSSKDIELAI  234 (307)
Q Consensus       163 ~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~---~v~~~~~~~~~~~~  234 (307)
                      +..+....+++||++||=+|  .+.|..+..+++..|++|+++.-+.. .+.    +.+.|..   .+...+..++  ..
T Consensus        22 ~~~l~~~~~l~pg~~VLDiG--CG~G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~--~~   97 (245)
T d1nkva_          22 YATLGRVLRMKPGTRILDLG--SGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY--VA   97 (245)
T ss_dssp             HHHHHHHTCCCTTCEEEEET--CTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC--CC
T ss_pred             HHHHHHHcCCCCCCEEEEEc--CCCCHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhc--cc
Confidence            44456688999999999998  45677788888888999999966544 222    3445543   2222222222  11


Q ss_pred             cCCccEEEECC-----CC-hhhHHHHHhcccCCcEEEEe
Q 021831          235 KGKFDAVLDTI-----GA-PETERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       235 ~~~~dvvid~~-----g~-~~~~~~~~~~l~~~G~~v~~  267 (307)
                      .+.||+|+..-     .+ ...+..+.+.|+|||+++..
T Consensus        98 ~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~  136 (245)
T d1nkva_          98 NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIG  136 (245)
T ss_dssp             SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEE
T ss_pred             cCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEE
Confidence            25799987642     22 34778899999999999875

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.02  E-value=0.00099  Score=55.88  Aligned_cols=101  Identities=15%  Similarity=0.101  Sum_probs=67.3

Q ss_pred             HHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HH----HHHcCCceEEeCCChhHHHHhcCC
Q 021831          163 WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAEQAVDYSSKDIELAIKGK  237 (307)
Q Consensus       163 ~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~----~~~~g~~~v~~~~~~~~~~~~~~~  237 (307)
                      ...+.+..++++|++||=+|  .+.|..++.+|+..|++|++++.+.++ +.    ..+.|....+.....++. .+.+.
T Consensus        51 ~~~~~~~l~l~~G~~VLDiG--CG~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~~-~~~~~  127 (285)
T d1kpga_          51 IDLALGKLGLQPGMTLLDVG--CGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWE-QFDEP  127 (285)
T ss_dssp             HHHHHTTTTCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGG-GCCCC
T ss_pred             HHHHHHHcCCCCCCEEEEec--CcchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhhh-ccccc
Confidence            33445678899999999999  568899999999999999999776553 22    234443222211111221 12357


Q ss_pred             ccEEEE-----CCCCh---hhHHHHHhcccCCcEEEE
Q 021831          238 FDAVLD-----TIGAP---ETERLGLNFLKRGGHYMT  266 (307)
Q Consensus       238 ~dvvid-----~~g~~---~~~~~~~~~l~~~G~~v~  266 (307)
                      ||.|+.     .++..   ..+..+.+.|+|||++++
T Consensus       128 fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l  164 (285)
T d1kpga_         128 VDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLL  164 (285)
T ss_dssp             CSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEE
T ss_pred             ccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEE
Confidence            887754     34432   356778899999999986

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.02  E-value=0.0036  Score=51.36  Aligned_cols=132  Identities=11%  Similarity=-0.000  Sum_probs=78.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHH-HH--HcCCEEEEEeCCcc-HHH-HH---HcCC-ceE----EeCCChhH----HHHhc-
Q 021831          174 EGQRLLVLGGGGAVGFAAVQF-SV--ASGCHVSATCGSKS-IDR-VL---AAGA-EQA----VDYSSKDI----ELAIK-  235 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~-a~--~~G~~Vi~~~~~~~-~~~-~~---~~g~-~~v----~~~~~~~~----~~~~~-  235 (307)
                      .|+.+||+||++++|++.++. |+  ..|++|+.+.++++ .+. .+   ..+. .++    .|.++++-    .+.+. 
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~   84 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            477889999999999987664 44  36899999877654 222 22   2221 122    24444321    12111 


Q ss_pred             ------CCccEEEECCCCh-------------hh---------------HHHHHhcccC----CcEEEEeccCccccccc
Q 021831          236 ------GKFDAVLDTIGAP-------------ET---------------ERLGLNFLKR----GGHYMTLHGETAALADH  277 (307)
Q Consensus       236 ------~~~dvvid~~g~~-------------~~---------------~~~~~~~l~~----~G~~v~~g~~~~~~~~~  277 (307)
                            ...|+++++.|..             +.               ...++..|+.    +|+++.++.........
T Consensus        85 ~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~~  164 (259)
T d1oaaa_          85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYK  164 (259)
T ss_dssp             SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCT
T ss_pred             hhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCCc
Confidence                  2568899886631             01               1445556654    37899998766554544


Q ss_pred             ccceechhHHHHHHHHHHHhhhhcccccc
Q 021831          278 YGLALGLPIATTVLLKKRMQTWYSYGIGC  306 (307)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  306 (307)
                      ....++....+...+-+.+... .+||++
T Consensus       165 ~~~~Y~asKaal~~lt~~la~e-~~gIrV  192 (259)
T d1oaaa_         165 GWGLYCAGKAARDMLYQVLAAE-EPSVRV  192 (259)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHH-CTTEEE
T ss_pred             cchHHHHHHHHHHHHHHHHHhC-CCCCEE
Confidence            5555566666666666666554 567775

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=96.99  E-value=0.00041  Score=57.12  Aligned_cols=99  Identities=16%  Similarity=0.150  Sum_probs=64.6

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCcc-HHHHH----HcC-CceEEeCCChhHHHHhc-CCc
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKS-IDRVL----AAG-AEQAVDYSSKDIELAIK-GKF  238 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G--~~Vi~~~~~~~-~~~~~----~~g-~~~v~~~~~~~~~~~~~-~~~  238 (307)
                      ...+++||++||=.|+  +.|.++..+|+..|  .+|+++..+++ .+.++    +++ ...+ +....++.+.+. +.|
T Consensus        79 ~~l~i~pG~rVLEiG~--GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv-~~~~~Di~~~~~~~~f  155 (250)
T d1yb2a1          79 MRCGLRPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNV-RTSRSDIADFISDQMY  155 (250)
T ss_dssp             --CCCCTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTE-EEECSCTTTCCCSCCE
T ss_pred             HHcCCCCcCEEEEeee--eCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCce-EEEEeeeeccccccee
Confidence            3678999999999994  45788888888765  38999865543 33333    333 2222 222223322232 479


Q ss_pred             cEEEECCCCh-hhHHHHHhcccCCcEEEEecc
Q 021831          239 DAVLDTIGAP-ETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       239 dvvid~~g~~-~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      |.||-....+ ..+..+.+.|+|||+++.+..
T Consensus       156 D~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~P  187 (250)
T d1yb2a1         156 DAVIADIPDPWNHVQKIASMMKPGSVATFYLP  187 (250)
T ss_dssp             EEEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred             eeeeecCCchHHHHHHHHHhcCCCceEEEEeC
Confidence            9888666554 578999999999999988643

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=96.97  E-value=0.0045  Score=50.79  Aligned_cols=73  Identities=22%  Similarity=0.345  Sum_probs=47.4

Q ss_pred             CCCEEEEEcCC--chHHHHHHHHHHHcCCEEEEEeCCccH--HH-HHHcCCc---eEEeCCChh----HHHHhc------
Q 021831          174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKSI--DR-VLAAGAE---QAVDYSSKD----IELAIK------  235 (307)
Q Consensus       174 ~g~~VlI~Ga~--g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~-~~~~g~~---~v~~~~~~~----~~~~~~------  235 (307)
                      .|.++||.||+  .++|.++++-+...|++|+.+.+++..  +. .++++..   ...|..+++    ..+.+.      
T Consensus         5 ~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~   84 (268)
T d2h7ma1           5 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   84 (268)
T ss_dssp             TTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccccC
Confidence            58899999954  469999999899999999888665432  22 3344432   222333321    222221      


Q ss_pred             CCccEEEECCC
Q 021831          236 GKFDAVLDTIG  246 (307)
Q Consensus       236 ~~~dvvid~~g  246 (307)
                      +..|+++++.|
T Consensus        85 ~~ld~~i~~ag   95 (268)
T d2h7ma1          85 NKLDGVVHSIG   95 (268)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCcceeeeccc
Confidence            46899999987

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=96.93  E-value=0.0072  Score=45.25  Aligned_cols=94  Identities=17%  Similarity=0.189  Sum_probs=69.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCccH----HHHHHcCCceEEeCCChhH---HHHh------------
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSI----DRVLAAGAEQAVDYSSKDI---ELAI------------  234 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~~~----~~~~~~g~~~v~~~~~~~~---~~~~------------  234 (307)
                      .+|.|.|++|.+|.-+.++.+.+  .++|++++-..+.    ++++++....++-.++...   ...+            
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~~   82 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGAD   82 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESHH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCcc
Confidence            68999999999999999999876  4689888544442    3467888877765554322   1111            


Q ss_pred             ------cCCccEEEECCCChhhHHHHHhcccCCcEEEEecc
Q 021831          235 ------KGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       235 ------~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                            ...+|+++.+..+...+...+.+++.|-++.+.-.
T Consensus        83 ~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaLANK  123 (150)
T d1r0ka2          83 ALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALANK  123 (150)
T ss_dssp             HHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEECCS
T ss_pred             chheecccccceeeeecCchhHHHHHHHHHhcCCEEEEecc
Confidence                  13689999998887799999999998877766443

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=96.93  E-value=0.0075  Score=49.25  Aligned_cols=33  Identities=15%  Similarity=0.225  Sum_probs=29.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK  209 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~  209 (307)
                      ..||+||++++|.+.++.+...|++|+.+.+..
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~   35 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHS   35 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence            359999999999999999999999999887654

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=96.93  E-value=0.0059  Score=50.46  Aligned_cols=31  Identities=23%  Similarity=0.180  Sum_probs=27.0

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 021831          178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (307)
Q Consensus       178 VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~  208 (307)
                      +||+||++++|.+.++.+...|++|+...+.
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga~V~i~~~~   35 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHR   35 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence            4888999999999999999999999877543

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=96.90  E-value=0.00072  Score=54.67  Aligned_cols=105  Identities=17%  Similarity=0.149  Sum_probs=67.2

Q ss_pred             hHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHc-C---CceEEeCCChh-HH
Q 021831          158 AALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAA-G---AEQAVDYSSKD-IE  231 (307)
Q Consensus       158 ~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~-g---~~~v~~~~~~~-~~  231 (307)
                      +...|. ++ +..++++|++||-+|  ++.|..++.+++. +.+|+++...++ .+.+++. .   ...++..+... +.
T Consensus        56 p~~~a~-ml-~~L~l~~g~~VLdIG--~GsGy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~~  130 (224)
T d1vbfa_          56 LNLGIF-ML-DELDLHKGQKVLEIG--TGIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE  130 (224)
T ss_dssp             HHHHHH-HH-HHTTCCTTCEEEEEC--CTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG
T ss_pred             hhhHHH-HH-HHhhhcccceEEEec--CCCCHHHHHHHHH-hcccccccccHHHHHHHHHHHhcccccccccCchhhcch
Confidence            444443 34 478999999999999  4578888777775 679998865544 2333332 1   11223222111 11


Q ss_pred             HHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEecc
Q 021831          232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       232 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      +  .+.||.|+-+.+.......+++.|++||++|..-+
T Consensus       131 ~--~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~pvg  166 (224)
T d1vbfa_         131 E--EKPYDRVVVWATAPTLLCKPYEQLKEGGIMILPIG  166 (224)
T ss_dssp             G--GCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             h--hhhHHHHHhhcchhhhhHHHHHhcCCCCEEEEEEc
Confidence            1  25799998776665455778899999999988643

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.0011  Score=52.47  Aligned_cols=94  Identities=16%  Similarity=0.208  Sum_probs=60.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HHHHHcCCceEEe--CCChh-HHHHhcCCccEEEECCCChh-
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVD--YSSKD-IELAIKGKFDAVLDTIGAPE-  249 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~~~~g~~~v~~--~~~~~-~~~~~~~~~dvvid~~g~~~-  249 (307)
                      .++|+|+||+|.+|..++..+...|.+|.+++|+.+. ......+. .++.  ..+.+ +.+.+ .+.|+||.++|... 
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~gD~~d~~~l~~al-~~~d~vi~~~g~~~~   80 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPA-HVVVGDVLQAADVDKTV-AGQDAVIVLLGTRND   80 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCS-EEEESCTTSHHHHHHHH-TTCSEEEECCCCTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccccccc-ccccccccchhhHHHHh-cCCCEEEEEeccCCc
Confidence            4689999999999999999888889999999876443 11222233 3333  33332 33333 67999999998521 


Q ss_pred             ---------hHHHHHhcccCC--cEEEEeccC
Q 021831          250 ---------TERLGLNFLKRG--GHYMTLHGE  270 (307)
Q Consensus       250 ---------~~~~~~~~l~~~--G~~v~~g~~  270 (307)
                               ....++..++..  .+++.++..
T Consensus        81 ~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~  112 (205)
T d1hdoa_          81 LSPTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (205)
T ss_dssp             CSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             hhhhhhhHHHHHHHHHHHHhcCCCeEEEEeee
Confidence                     223445555443  478877653

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.89  E-value=0.0035  Score=53.44  Aligned_cols=35  Identities=6%  Similarity=0.031  Sum_probs=28.4

Q ss_pred             CCEEEEEc--CCchHHHHHHHHHHHcCCEEEEEeCCc
Q 021831          175 GQRLLVLG--GGGAVGFAAVQFSVASGCHVSATCGSK  209 (307)
Q Consensus       175 g~~VlI~G--a~g~~G~~~~~~a~~~G~~Vi~~~~~~  209 (307)
                      ++..||+|  ++.++|++.++.+...|++|+...+..
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~   38 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP   38 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCch
Confidence            45679999  446999999999999999998875543

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.87  E-value=0.00073  Score=56.61  Aligned_cols=102  Identities=13%  Similarity=0.079  Sum_probs=66.4

Q ss_pred             HHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H----HHHHcCCceEEeCCChhHHHHhcCC
Q 021831          163 WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQAVDYSSKDIELAIKGK  237 (307)
Q Consensus       163 ~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~----~~~~~g~~~v~~~~~~~~~~~~~~~  237 (307)
                      +..+.+..++++|++||=+|  .+.|..+..+++..|++|++++.+++. +    .+++.|....+.....+.. ...+.
T Consensus        41 ~~~~~~~l~l~~g~~VLDiG--CG~G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d~~-~~~~~  117 (280)
T d2fk8a1          41 VDLNLDKLDLKPGMTLLDIG--CGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWE-DFAEP  117 (280)
T ss_dssp             HHHHHTTSCCCTTCEEEEES--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGG-GCCCC
T ss_pred             HHHHHHHcCCCCCCEEEEec--CCchHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhhhhh-hhccc
Confidence            44455577899999999999  445667778888889999999776553 2    2344454322211111211 12357


Q ss_pred             ccEEEE-----CCCCh---hhHHHHHhcccCCcEEEEe
Q 021831          238 FDAVLD-----TIGAP---ETERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       238 ~dvvid-----~~g~~---~~~~~~~~~l~~~G~~v~~  267 (307)
                      ||.|+.     .++..   ..+..+.+.|+|||+++.-
T Consensus       118 fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~  155 (280)
T d2fk8a1         118 VDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ  155 (280)
T ss_dssp             CSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred             hhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEE
Confidence            998854     34433   3567788999999999873

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.85  E-value=0.0064  Score=49.47  Aligned_cols=72  Identities=14%  Similarity=0.295  Sum_probs=45.3

Q ss_pred             CEEEEEcCCchHHHHHHHHHH---HcCCEEEEEeCCcc-HHHH----HHcCCceEE--eCCCh----hHHHHhc-----C
Q 021831          176 QRLLVLGGGGAVGFAAVQFSV---ASGCHVSATCGSKS-IDRV----LAAGAEQAV--DYSSK----DIELAIK-----G  236 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~---~~G~~Vi~~~~~~~-~~~~----~~~g~~~v~--~~~~~----~~~~~~~-----~  236 (307)
                      .+|||+||++++|++.++.+.   ..|++|+...++++ .+.+    +..+.-.++  |.++.    .+.+.+.     +
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            579999999999999886554   46889999877654 2222    222222222  34332    2223221     5


Q ss_pred             CccEEEECCCC
Q 021831          237 KFDAVLDTIGA  247 (307)
Q Consensus       237 ~~dvvid~~g~  247 (307)
                      ++|++|++.|.
T Consensus        83 ~iDiLvnNAg~   93 (248)
T d1snya_          83 GLNVLFNNAGI   93 (248)
T ss_dssp             CCSEEEECCCC
T ss_pred             CcceEEeeccc
Confidence            79999999874

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.0022  Score=51.69  Aligned_cols=95  Identities=24%  Similarity=0.302  Sum_probs=62.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCccH-HH----HHHcCC-----c--eEEeCCChhHHHHhcC
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-DR----VLAAGA-----E--QAVDYSSKDIELAIKG  236 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~~~~~~~-~~----~~~~g~-----~--~v~~~~~~~~~~~~~~  236 (307)
                      ++++|++||-+|  ++.|..++.+++..|.  +|+++...++. +.    +++.+.     .  .+...+.... ..-.+
T Consensus        73 ~l~~g~~VLdiG--~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~-~~~~~  149 (224)
T d1i1na_          73 QLHEGAKALDVG--SGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG-YAEEA  149 (224)
T ss_dssp             TSCTTCEEEEET--CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC-CGGGC
T ss_pred             ccCCCCeEEEec--CCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccc-cchhh
Confidence            789999999999  5678888889887663  89998665442 22    232222     1  2222221110 00115


Q ss_pred             CccEEEECCCChhhHHHHHhcccCCcEEEEec
Q 021831          237 KFDAVLDTIGAPETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       237 ~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g  268 (307)
                      .||+|+.+..-......+++.|+|||++|..-
T Consensus       150 ~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~pv  181 (224)
T d1i1na_         150 PYDAIHVGAAAPVVPQALIDQLKPGGRLILPV  181 (224)
T ss_dssp             CEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             hhhhhhhhcchhhcCHHHHhhcCCCcEEEEEE
Confidence            79999988776656678899999999998853

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.73  E-value=0.0033  Score=44.73  Aligned_cols=91  Identities=9%  Similarity=0.110  Sum_probs=63.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHH--HHHcCCceEEe--CCChhHHHHhcCCccEEEECCCChh
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR--VLAAGAEQAVD--YSSKDIELAIKGKFDAVLDTIGAPE  249 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~--~~~~g~~~v~~--~~~~~~~~~~~~~~dvvid~~g~~~  249 (307)
                      .|.+|||.|+ |.+|..-++.+...|++|+++......+.  +.+.+......  +...++     .++++|+-++++..
T Consensus        11 ~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~dl-----~~~~lv~~at~d~~   84 (113)
T d1pjqa1          11 RDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLL-----DSCWLAIAATDDDT   84 (113)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGG-----TTCSEEEECCSCHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCHHHh-----CCCcEEeecCCCHH
Confidence            4789999995 99999999999999999888865544332  22223222222  222222     46899999999985


Q ss_pred             hHHHHHhcccCCcEEEEeccC
Q 021831          250 TERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      .-.......++.|.+|-+...
T Consensus        85 ~n~~i~~~a~~~~ilVNv~D~  105 (113)
T d1pjqa1          85 VNQRVSDAAESRRIFCNVVDA  105 (113)
T ss_dssp             HHHHHHHHHHHTTCEEEETTC
T ss_pred             HHHHHHHHHHHcCCEEEeCCC
Confidence            545666777888888876643

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.72  E-value=0.001  Score=53.85  Aligned_cols=36  Identities=28%  Similarity=0.257  Sum_probs=31.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~  210 (307)
                      ++++||+||++++|.+.++.+...|++|+.+.+.++
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~   36 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE   36 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc
Confidence            357899999999999999999999999998876543

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.72  E-value=0.00049  Score=55.67  Aligned_cols=94  Identities=18%  Similarity=0.271  Sum_probs=58.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHH---cC----CEEEEEeCCccH-HHHH---------HcCCc--eEEeCCChhHH
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVA---SG----CHVSATCGSKSI-DRVL---------AAGAE--QAVDYSSKDIE  231 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~---~G----~~Vi~~~~~~~~-~~~~---------~~g~~--~v~~~~~~~~~  231 (307)
                      ++++|++||.+|.  +.|..++.+++.   .|    .+|+++-..++. +.++         ..+..  .+...+.... 
T Consensus        77 ~l~~g~~VLeIGt--GsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~-  153 (223)
T d1r18a_          77 HLKPGARILDVGS--GSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG-  153 (223)
T ss_dssp             TCCTTCEEEEESC--TTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC-
T ss_pred             ccCCCCeEEEecC--CCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccc-
Confidence            7899999999994  567666666654   34    389988655432 2221         11222  2222221110 


Q ss_pred             HHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEe
Q 021831          232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       232 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~  267 (307)
                      ....+.||.|+-+.+-...-..+++.|++||++|..
T Consensus       154 ~~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p  189 (223)
T d1r18a_         154 YPPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  189 (223)
T ss_dssp             CGGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             cccccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence            011257998888777665567788999999999874

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.68  E-value=0.0041  Score=51.91  Aligned_cols=36  Identities=19%  Similarity=0.302  Sum_probs=31.2

Q ss_pred             CCCEEEEEcCCc--hHHHHHHHHHHHcCCEEEEEeCCc
Q 021831          174 EGQRLLVLGGGG--AVGFAAVQFSVASGCHVSATCGSK  209 (307)
Q Consensus       174 ~g~~VlI~Ga~g--~~G~~~~~~a~~~G~~Vi~~~~~~  209 (307)
                      .|+++||+||+|  ++|.+.++.+...|++|+...+..
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~   44 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVP   44 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCch
Confidence            588999999876  899999999999999998776543

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.62  E-value=0.0035  Score=47.99  Aligned_cols=94  Identities=12%  Similarity=0.131  Sum_probs=58.5

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCccH-H-HHHHcCCceEEeCCChhHHHHhcCCccEEEECC
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-D-RVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTI  245 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~~-~-~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~  245 (307)
                      ...+.++.+|+|+|+ |+.+.+++..++.+|+ ++..+.|+.+. + ..+.++...+-+..        ...+|++|||+
T Consensus        11 ~~~~~~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~~--------~~~~DliINaT   81 (167)
T d1npya1          11 KYHLNKNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--------NQQADILVNVT   81 (167)
T ss_dssp             HTTCCTTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--------TCCCSEEEECS
T ss_pred             HcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhccc--------ccchhhheecc
Confidence            556667899999995 9999999999999998 66666666543 2 23455543321111        13589999997


Q ss_pred             CCh-----hhH--HHHHhcccCCcEEEEeccCc
Q 021831          246 GAP-----ETE--RLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       246 g~~-----~~~--~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +-.     ...  ..-...+.+...++++-..+
T Consensus        82 piGm~~~~~~~~l~~~~~~~~~~~~v~D~vY~P  114 (167)
T d1npya1          82 SIGMKGGKEEMDLAFPKAFIDNASVAFDVVAMP  114 (167)
T ss_dssp             STTCTTSTTTTSCSSCHHHHHHCSEEEECCCSS
T ss_pred             ccCCccccccccccccHhhcCCcceEEEEeecc
Confidence            621     111  11123355666777765443

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.57  E-value=0.0013  Score=50.70  Aligned_cols=104  Identities=13%  Similarity=0.178  Sum_probs=61.8

Q ss_pred             HHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-H-HHHHcCCc-eEEeCCChhHHHHhcCCccE
Q 021831          164 RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAGAE-QAVDYSSKDIELAIKGKFDA  240 (307)
Q Consensus       164 ~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~-~~~~~g~~-~v~~~~~~~~~~~~~~~~dv  240 (307)
                      +.|+...-..+|.+|||+|+ |+.+.+++..+..+|++++.+.|+.++ + ..+.+... .+......+   .....+|+
T Consensus         7 ~~l~~~~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~---~~~~~~dl   82 (170)
T d1nyta1           7 SDLERLSFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDE---LEGHEFDL   82 (170)
T ss_dssp             HHHHHHTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGG---GTTCCCSE
T ss_pred             HHHHHcCCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccccccc---ccccccce
Confidence            34544433457899999995 999999998888999997766666443 2 23333321 111111111   11246899


Q ss_pred             EEECCCChhh---HHHHHhcccCCcEEEEeccCc
Q 021831          241 VLDTIGAPET---ERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       241 vid~~g~~~~---~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +|+|+.....   ...-...++++..++++-..+
T Consensus        83 iIN~Tp~G~~~~~~~~~~~~~~~~~~v~D~vY~P  116 (170)
T d1nyta1          83 IINATSSGISGDIPAIPSSLIHPGIYCYDMFYQK  116 (170)
T ss_dssp             EEECCSCGGGTCCCCCCGGGCCTTCEEEESCCCS
T ss_pred             eecccccCcccCCCCCcHHHhccCcEEEEeecCC
Confidence            9999864311   111234577777777776543

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.54  E-value=0.003  Score=48.97  Aligned_cols=97  Identities=14%  Similarity=0.078  Sum_probs=60.8

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHc-CCc-----------------eEEeCCChh
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAA-GAE-----------------QAVDYSSKD  229 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~-g~~-----------------~v~~~~~~~  229 (307)
                      ...++||.+||..|  .+.|..+..+|++ |++|+++.-+++ .+.+++. ...                 ..+..+..+
T Consensus        15 ~l~~~~~~rvLd~G--CG~G~~a~~la~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~   91 (201)
T d1pjza_          15 SLNVVPGARVLVPL--CGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFA   91 (201)
T ss_dssp             HHCCCTTCEEEETT--TCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSS
T ss_pred             HcCCCCCCEEEEec--CcCCHHHHHHHHc-CCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccc
Confidence            45788999999999  4578888888874 999999965543 4444432 110                 111111111


Q ss_pred             HHHHhcCCccEEEECCCC--------hhhHHHHHhcccCCcEEEEec
Q 021831          230 IELAIKGKFDAVLDTIGA--------PETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       230 ~~~~~~~~~dvvid~~g~--------~~~~~~~~~~l~~~G~~v~~g  268 (307)
                      +.......+|+|++...-        ...+..+.+.|+|||+++...
T Consensus        92 l~~~~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~  138 (201)
T d1pjza_          92 LTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  138 (201)
T ss_dssp             STHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             cccccccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence            111112468999986442        235677888999999976644

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.38  E-value=0.0047  Score=50.94  Aligned_cols=98  Identities=19%  Similarity=0.214  Sum_probs=66.0

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCC-ccHHHHH----Hc--C-CceE-EeCCChhHHHH-h-
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGS-KSIDRVL----AA--G-AEQA-VDYSSKDIELA-I-  234 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~~~~-~~~~~~~----~~--g-~~~v-~~~~~~~~~~~-~-  234 (307)
                      ...+++||++||=.|  .+.|.++..+|+..|-  +|+++..+ +..+.++    .+  + .+.+ +...  +..+. . 
T Consensus        90 ~~l~i~PG~~VLE~G--~GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~--d~~~~~~~  165 (264)
T d1i9ga_          90 HEGDIFPGARVLEAG--AGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS--DLADSELP  165 (264)
T ss_dssp             HHTTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS--CGGGCCCC
T ss_pred             HHhCCCCCCEEEecC--cCCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEec--cccccccc
Confidence            478999999999998  4678999999998764  89998544 4333332    22  1 2222 2111  11111 1 


Q ss_pred             cCCccEEEECCCCh-hhHHHHHhcccCCcEEEEecc
Q 021831          235 KGKFDAVLDTIGAP-ETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       235 ~~~~dvvid~~g~~-~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      .+.||.||--...+ ..+..+.+.|+|||+++.+-.
T Consensus       166 ~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~P  201 (264)
T d1i9ga_         166 DGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA  201 (264)
T ss_dssp             TTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             CCCcceEEEecCCHHHHHHHHHhccCCCCEEEEEeC
Confidence            15799887766664 578899999999999988653

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.37  E-value=0.0028  Score=51.13  Aligned_cols=99  Identities=17%  Similarity=0.233  Sum_probs=64.9

Q ss_pred             HHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc--eEEeCCChhHHHHhcCC
Q 021831          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE--QAVDYSSKDIELAIKGK  237 (307)
Q Consensus       165 ~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~--~v~~~~~~~~~~~~~~~  237 (307)
                      .+...++++||++||=+|  .+.|..+..+++. +.+|+++.-+.. .+.    +...+.+  .++..+..++. .-.+.
T Consensus         7 ~l~~~~~~~~~~rILDiG--cGtG~~~~~la~~-~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~-~~~~~   82 (234)
T d1xxla_           7 LMIKTAECRAEHRVLDIG--AGAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-FPDDS   82 (234)
T ss_dssp             HHHHHHTCCTTCEEEEES--CTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-SCTTC
T ss_pred             HHHHHhCCCCCCEEEEeC--CcCcHHHHHHHHh-CCeEEEEeCChhhhhhhhhhhccccccccccccccccccc-ccccc
Confidence            455688999999999999  4578888888774 789999976654 222    3344433  22222222210 01157


Q ss_pred             ccEEEECCC-----C-hhhHHHHHhcccCCcEEEEe
Q 021831          238 FDAVLDTIG-----A-PETERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       238 ~dvvid~~g-----~-~~~~~~~~~~l~~~G~~v~~  267 (307)
                      ||+|+.+-.     + ...+..+.+.|+|||+++..
T Consensus        83 fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~  118 (234)
T d1xxla_          83 FDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLV  118 (234)
T ss_dssp             EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEE
Confidence            999987543     2 23678899999999998875

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.31  E-value=0.026  Score=43.15  Aligned_cols=95  Identities=16%  Similarity=0.082  Sum_probs=65.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCC-cc--HHHHHHcCCceEEeCCC--hhHHHHh----------cCCccE
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASG-CHVSATCGS-KS--IDRVLAAGAEQAVDYSS--KDIELAI----------KGKFDA  240 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~-~~--~~~~~~~g~~~v~~~~~--~~~~~~~----------~~~~dv  240 (307)
                      +|.|+| .|.+|..+...+.... .+++++.+. ..  ...+.+.+.+.......  ..+.+.-          ..++|+
T Consensus         4 rIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vDv   82 (172)
T d2czca2           4 KVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDI   82 (172)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSE
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccCCE
Confidence            689999 6999999888887655 488888432 22  23355666543221111  1121111          147999


Q ss_pred             EEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          241 VLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       241 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      |+||+|.-.....+-..+..|-+.|..+.+..
T Consensus        83 ViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~~  114 (172)
T d2czca2          83 IVDATPGGIGAKNKPLYEKAGVKAIFQGGEKA  114 (172)
T ss_dssp             EEECCSTTHHHHHHHHHHHHTCEEEECTTSCG
T ss_pred             EEECCCCCCCHHHHHHHHHcCCCEEEECCCCc
Confidence            99999998778888889999999999998865

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.31  E-value=0.0073  Score=46.85  Aligned_cols=94  Identities=17%  Similarity=0.104  Sum_probs=62.1

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-H----HHHHHcCCc---eEEeCCChhHHHHhc--CCc
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-I----DRVLAAGAE---QAVDYSSKDIELAIK--GKF  238 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~----~~~~~~g~~---~v~~~~~~~~~~~~~--~~~  238 (307)
                      ...+++|++||=+|.  +.|..++.+|+. +.+|+++..+.+ .    +.+++.|..   .++..   +..+...  ..|
T Consensus        28 ~l~~~~g~~VLDiGc--GsG~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~g---da~~~~~~~~~~  101 (186)
T d1l3ia_          28 LAEPGKNDVAVDVGC--GTGGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG---DAPEALCKIPDI  101 (186)
T ss_dssp             HHCCCTTCEEEEESC--TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES---CHHHHHTTSCCE
T ss_pred             hcCCCCCCEEEEEEC--CeEccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEEC---chhhcccccCCc
Confidence            568899999999984  456677777764 569999865533 2    235566652   23332   3333332  579


Q ss_pred             cEEEECCCC---hhhHHHHHhcccCCcEEEEec
Q 021831          239 DAVLDTIGA---PETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       239 dvvid~~g~---~~~~~~~~~~l~~~G~~v~~g  268 (307)
                      |.|+-.-+.   ...+..+.+.|+|+|+++...
T Consensus       102 D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~  134 (186)
T d1l3ia_         102 DIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (186)
T ss_dssp             EEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CEEEEeCccccchHHHHHHHHHhCcCCEEEEEe
Confidence            988876443   235777888999999988654

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.25  E-value=0.019  Score=46.86  Aligned_cols=93  Identities=18%  Similarity=0.215  Sum_probs=60.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc-eEEeCCChhHHHHhc-CCccEEEE
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE-QAVDYSSKDIELAIK-GKFDAVLD  243 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~-~v~~~~~~~~~~~~~-~~~dvvid  243 (307)
                      ..++|++||=.|.  +.|..++.++ ..|++|+++..+.. .+.    ++..+.. .++..   +...... +.||+|+.
T Consensus       117 ~~~~g~~VLDiGc--GsG~l~i~aa-~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~---d~~~~~~~~~fD~V~a  190 (254)
T d2nxca1         117 HLRPGDKVLDLGT--GSGVLAIAAE-KLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEG---SLEAALPFGPFDLLVA  190 (254)
T ss_dssp             HCCTTCEEEEETC--TTSHHHHHHH-HTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEES---CHHHHGGGCCEEEEEE
T ss_pred             hcCccCEEEEccc--chhHHHHHHH-hcCCEEEEEECChHHHHHHHHHHHHcCCceeEEec---cccccccccccchhhh
Confidence            3578999999984  3577776555 46899999855443 333    3445543 33332   2333333 68999987


Q ss_pred             CCCCh---hhHHHHHhcccCCcEEEEecc
Q 021831          244 TIGAP---ETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       244 ~~g~~---~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      +....   ..+..+.+.|+|||++++.|.
T Consensus       191 ni~~~~l~~l~~~~~~~LkpGG~lilSgi  219 (254)
T d2nxca1         191 NLYAELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             ECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence            65432   245677789999999998654

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.22  E-value=0.003  Score=43.27  Aligned_cols=70  Identities=16%  Similarity=0.233  Sum_probs=46.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHc--CCceEEeCCChhHHHHhcCCccEEEECCCCh
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAA--GAEQAVDYSSKDIELAIKGKFDAVLDTIGAP  248 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~--g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~  248 (307)
                      .|.+|+|+|. |.+|+++++++...|++|++............+  +....+........    ..+|.++-+-|-+
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~d~vi~SPGi~   75 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSLNDEWL----MAADLIVASPGIA   75 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCTTSCEEESBCCHHHH----HHCSEEEECTTSC
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhhccceeecccchhhh----ccCCEEEECCCCC
Confidence            4789999995 999999999999999999988654332221121  22222222222222    2389999888865

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.20  E-value=0.041  Score=41.40  Aligned_cols=102  Identities=19%  Similarity=0.102  Sum_probs=70.1

Q ss_pred             HHHHHHHHcC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHH-HHHcCCceEEeCCChhHHHHhcCCcc
Q 021831          162 AWRALKCAAR-MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR-VLAAGAEQAVDYSSKDIELAIKGKFD  239 (307)
Q Consensus       162 a~~~l~~~~~-~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~~~~~~d  239 (307)
                      .+.++.+..+ +-.|++++|.| .|-+|..+++.++.+|++|++......... +.--|+. +.     .+.+.+ ...|
T Consensus        10 ~~~~~~r~t~~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~-v~-----~~~~a~-~~ad   81 (163)
T d1li4a1          10 LIDGIKRATDVMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYE-VT-----TMDEAC-QEGN   81 (163)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-EC-----CHHHHT-TTCS
T ss_pred             HHHHHHHHhCceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhhcCceE-ee-----ehhhhh-hhcc
Confidence            4444444444 45899999999 799999999999999999999844332222 3333432 21     233333 4589


Q ss_pred             EEEECCCChh-hHHHHHhcccCCcEEEEeccCc
Q 021831          240 AVLDTIGAPE-TERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       240 vvid~~g~~~-~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +++-++|+.. .-..-+..|+++-.+.-+|...
T Consensus        82 ivvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghfd  114 (163)
T d1li4a1          82 IFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFD  114 (163)
T ss_dssp             EEEECSSCSCSBCHHHHTTCCTTEEEEECSSST
T ss_pred             EEEecCCCccchhHHHHHhccCCeEEEEecccc
Confidence            9999999853 3355678888888888888653

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.19  E-value=0.0031  Score=52.39  Aligned_cols=99  Identities=17%  Similarity=0.066  Sum_probs=65.4

Q ss_pred             HHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc---eEEeCCChhHHHHhc-C
Q 021831          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE---QAVDYSSKDIELAIK-G  236 (307)
Q Consensus       166 l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~---~v~~~~~~~~~~~~~-~  236 (307)
                      +.....+++|++||=+|  .+.|..+..+++..|++|+++.-+.. .+.    ....|..   .+...+..++.  .. +
T Consensus        59 l~~~~~l~~~~~vLDiG--cG~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~--~~~~  134 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLG--AGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP--CEDN  134 (282)
T ss_dssp             HHHTTCCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS--SCTT
T ss_pred             HHHhcCCCCCCEEEEeC--CCCcHHHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccccccccc--cccc
Confidence            34456889999999999  44788888888888999999965543 222    3344432   23333222211  11 5


Q ss_pred             CccEEEECC-----CCh-hhHHHHHhcccCCcEEEEec
Q 021831          237 KFDAVLDTI-----GAP-ETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       237 ~~dvvid~~-----g~~-~~~~~~~~~l~~~G~~v~~g  268 (307)
                      .||+|+-.-     .+. ..+..+.++|+|||+++...
T Consensus       135 sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~  172 (282)
T d2o57a1         135 SYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITD  172 (282)
T ss_dssp             CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEE
Confidence            799997642     222 36788999999999988764

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.11  E-value=0.0097  Score=50.50  Aligned_cols=100  Identities=22%  Similarity=0.147  Sum_probs=62.9

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCc-cHHHHH----HcC-----------Cc--eEEeCCC
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSK-SIDRVL----AAG-----------AE--QAVDYSS  227 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~~~~~-~~~~~~----~~g-----------~~--~v~~~~~  227 (307)
                      ...+++||++||=.|  .+.|.++..+|+..|.  +|+++..++ ..+.++    +.+           .+  .+...+-
T Consensus        92 ~~l~i~pG~rVLE~G--tGsG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~di  169 (324)
T d2b25a1          92 SMMDINPGDTVLEAG--SGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDI  169 (324)
T ss_dssp             HHHTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCT
T ss_pred             HHhCCCCCCEEEEec--ccccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecch
Confidence            377999999999998  3569999999998775  899985543 333322    211           11  1222222


Q ss_pred             hhHHHHhc-CCccEEEECCCCh-hhHHHHHhcccCCcEEEEecc
Q 021831          228 KDIELAIK-GKFDAVLDTIGAP-ETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       228 ~~~~~~~~-~~~dvvid~~g~~-~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      .++...+. ..||.||--.+.+ ..+..+.+.|+|||+++.+-.
T Consensus       170 ~~~~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~P  213 (324)
T d2b25a1         170 SGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  213 (324)
T ss_dssp             TCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             hhcccccCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEeC
Confidence            22212222 4689877555553 488999999999999998653

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=96.08  E-value=0.042  Score=40.90  Aligned_cols=93  Identities=17%  Similarity=0.216  Sum_probs=68.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC--CEEEEEeCCccH----HHHHHcCCceEEeCCChhHH-------------------
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI----DRVLAAGAEQAVDYSSKDIE-------------------  231 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G--~~Vi~~~~~~~~----~~~~~~g~~~v~~~~~~~~~-------------------  231 (307)
                      +|.|.|++|.+|.-+..+.+.+-  ++|++.+-..+.    +++.++....++-.++....                   
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g~   82 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQ   82 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEESH
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccCh
Confidence            68999999999999999999873  588888544443    33567888777665543211                   


Q ss_pred             ----HHhc-CCccEEEECCCChhhHHHHHhcccCCcEEEEecc
Q 021831          232 ----LAIK-GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       232 ----~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                          +... ..+|+|+.+..+...+...+..++.|=++.+.-.
T Consensus        83 ~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaLANK  125 (151)
T d1q0qa2          83 QAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANK  125 (151)
T ss_dssp             HHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEECCH
T ss_pred             HHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEEEcc
Confidence                1111 3789999999888788999998888877666443

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.06  E-value=0.018  Score=43.53  Aligned_cols=96  Identities=17%  Similarity=0.171  Sum_probs=65.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHH--HHHcCCceEEeCCC--hhHHHHhcCCccEEEECCCChhh
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR--VLAAGAEQAVDYSS--KDIELAIKGKFDAVLDTIGAPET  250 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~--~~~~g~~~v~~~~~--~~~~~~~~~~~dvvid~~g~~~~  250 (307)
                      +.+|+|+|| |.+|..+++.+...|.+|+++.++.....  ...++...+.....  ....+......|+++.+++....
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~   80 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFH   80 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSCGGGH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeeccchhh
Confidence            678999996 99999999999999999988877765332  33444333322222  12222222568899988887756


Q ss_pred             HHHHHhcccCCcEEEEeccCc
Q 021831          251 ERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ...+..++..+-.++......
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~  101 (182)
T d1e5qa1          81 ATVIKSAIRQKKHVVTTSYVS  101 (182)
T ss_dssp             HHHHHHHHHHTCEEECSSCCC
T ss_pred             hHHHHHHHhhccceeecccCc
Confidence            666666777788888777554

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=95.95  E-value=0.044  Score=41.73  Aligned_cols=95  Identities=18%  Similarity=0.142  Sum_probs=63.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEeC-CccH--HHHHHcCCceEEeCCChh--HHHH-h---------cCCccE
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASG-CHVSATCG-SKSI--DRVLAAGAEQAVDYSSKD--IELA-I---------KGKFDA  240 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~-~~~~--~~~~~~g~~~v~~~~~~~--~~~~-~---------~~~~dv  240 (307)
                      +|.|+| .|.+|..+.+.+...+ .+++++.. ....  ..+...+.+......+..  +.+. +         ..++|+
T Consensus         3 ~VgING-fGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~vDv   81 (171)
T d1cf2o1           3 AVAING-YGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI   81 (171)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred             EEEEEc-CcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCCCE
Confidence            688999 7999999999887766 47887743 3222  335555654333222211  1110 0         146999


Q ss_pred             EEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          241 VLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       241 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      |+||+|.-.....+-..+..|-+.|..+.+..
T Consensus        82 ViEcTG~f~~~~~~~~hl~~G~K~vi~~~~~~  113 (171)
T d1cf2o1          82 VIDCTPEGIGAKNLKMYKEKGIKAIFQGGEKH  113 (171)
T ss_dssp             EEECCSTTHHHHHHHHHHHTTCEEEECTTSCH
T ss_pred             EEEccCCCCCHHHHHHHHHcCCCEEEECCCCc
Confidence            99999987677778888888889888877654

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.89  E-value=0.01  Score=46.95  Aligned_cols=72  Identities=17%  Similarity=0.072  Sum_probs=44.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCccHHHHHHcCCceE-EeCCChhHHHHhcCCccEEEECCCC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSIDRVLAAGAEQA-VDYSSKDIELAIKGKFDAVLDTIGA  247 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~dvvid~~g~  247 (307)
                      .+|||+||+|.+|..+++.+...|.  .|++..++.+.......+.+.+ .|..+.........++|.||.+.+.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   78 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSA   78 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccCCcEEEEeeeccccccccccccceeeEEEEee
Confidence            4899999999999999999988886  4555555543222111222222 2333333333333679999998763

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.85  E-value=0.012  Score=47.69  Aligned_cols=73  Identities=15%  Similarity=0.261  Sum_probs=47.6

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCcc-HHHHHHcC-Cc-eEE--eCCChh----HHHHhc---C--Cc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKS-IDRVLAAG-AE-QAV--DYSSKD----IELAIK---G--KF  238 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~~~~~~-~~~~~~~g-~~-~v~--~~~~~~----~~~~~~---~--~~  238 (307)
                      ..+|||+||++++|++.++.+...|+  +|+...++.+ .+.+++.. .. +++  |.++.+    +.+.+.   +  +.
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            47899999999999999888888886  6777776543 34444433 21 233  444432    222221   2  58


Q ss_pred             cEEEECCCC
Q 021831          239 DAVLDTIGA  247 (307)
Q Consensus       239 dvvid~~g~  247 (307)
                      |++|++.|.
T Consensus        83 dilinnAG~   91 (250)
T d1yo6a1          83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             EEEEEcCcc
Confidence            999999884

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=95.57  E-value=0.042  Score=42.16  Aligned_cols=93  Identities=17%  Similarity=0.110  Sum_probs=58.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCc-cH--HHHHHcCCceEEeCCCh------------hHHHHhcCCccE
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSK-SI--DRVLAAGAEQAVDYSSK------------DIELAIKGKFDA  240 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~~-~~--~~~~~~g~~~v~~~~~~------------~~~~~~~~~~dv  240 (307)
                      +|.|+| .|.+|+.+.+.+..+. .+++++.+.. ..  ..+...+..........            ++.+.. .++|+
T Consensus         3 KVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~-~~vDi   80 (178)
T d1b7go1           3 NVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLI-KTSDI   80 (178)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHH-HHCSE
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhh-hcCCE
Confidence            588999 7999999999998765 5888885432 22  22333332211111110            111110 25899


Q ss_pred             EEECCCChhhHHHHHhcccCCcEEEEeccCc
Q 021831          241 VLDTIGAPETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       241 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      |+||+|.-...+.+-.+++.|-++|..+.+.
T Consensus        81 ViecTG~f~~~e~a~~hl~~G~KvIi~~~~~  111 (178)
T d1b7go1          81 VVDTTPNGVGAQYKPIYLQLQRNAIFQGGEK  111 (178)
T ss_dssp             EEECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred             EEECCCCcCCHHHHHHHHHcCCEEEEECCCC
Confidence            9999998767777778888777777766543

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=95.54  E-value=0.0096  Score=47.40  Aligned_cols=96  Identities=19%  Similarity=0.215  Sum_probs=62.7

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCce--EEeCCChhHHHHhcCCccE
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAEQ--AVDYSSKDIELAIKGKFDA  240 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~~--v~~~~~~~~~~~~~~~~dv  240 (307)
                      +.++++++++||=+|.  +.|..+..+++ .|++|+++.-+.. .+.    +...+...  ++..+..++. ...+.||+
T Consensus         9 ~~~~l~~~~rVLDiGc--G~G~~~~~l~~-~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-~~~~~fD~   84 (231)
T d1vl5a_           9 QIAALKGNEEVLDVAT--GGGHVANAFAP-FVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-FTDERFHI   84 (231)
T ss_dssp             HHHTCCSCCEEEEETC--TTCHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-SCTTCEEE
T ss_pred             HhcCCCCcCEEEEecc--cCcHHHHHHHH-hCCEEEEEECCHHHHhhhhhccccccccccccccccccccc-cccccccc
Confidence            4789999999999994  47777777765 4789999865543 222    33445432  3333322221 01157999


Q ss_pred             EEECCC-----Ch-hhHHHHHhcccCCcEEEEe
Q 021831          241 VLDTIG-----AP-ETERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       241 vid~~g-----~~-~~~~~~~~~l~~~G~~v~~  267 (307)
                      |+..-.     +. ..+..+.++|+|||+++..
T Consensus        85 v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~  117 (231)
T d1vl5a_          85 VTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLV  117 (231)
T ss_dssp             EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccccccccccCCHHHHHHHHHHhcCCCcEEEEE
Confidence            987533     32 3678899999999999875

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=95.53  E-value=0.056  Score=41.43  Aligned_cols=96  Identities=13%  Similarity=0.143  Sum_probs=59.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCcc-HHH----HHHcC----C-ceEEeCCCh-hHHHHhcCCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDR----VLAAG----A-EQAVDYSSK-DIELAIKGKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~-~~~----~~~~g----~-~~v~~~~~~-~~~~~~~~~~dvv  241 (307)
                      .+.+|+|+|+ |+.+.+++..+..+|+ +++...+..+ .+.    +++++    . ..+.+..+. .+.+.+ ..+|++
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dii   94 (182)
T d1vi2a1          17 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEAL-ASADIL   94 (182)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHH-HTCSEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhh-ccccee
Confidence            6789999995 8999999988888999 5666665432 222    22222    1 223444432 233322 468999


Q ss_pred             EECCCChh------hHHHHHhcccCCcEEEEeccCc
Q 021831          242 LDTIGAPE------TERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       242 id~~g~~~------~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      |||++-..      ....-...++++..++.+-..+
T Consensus        95 IN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y~p  130 (182)
T d1vi2a1          95 TNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNP  130 (182)
T ss_dssp             EECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCCSS
T ss_pred             ccccCCccccccchhhhhHHHhhhcchhhHHhhcCc
Confidence            99986320      1111135678888998887543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.50  E-value=0.0099  Score=47.65  Aligned_cols=72  Identities=19%  Similarity=0.219  Sum_probs=45.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCccHHHHHHcCCceE--EeCCCh-hHHHHhcCCccEEEECCCC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSIDRVLAAGAEQA--VDYSSK-DIELAIKGKFDAVLDTIGA  247 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~~~~~~~~~~~~~g~~~v--~~~~~~-~~~~~~~~~~dvvid~~g~  247 (307)
                      +.+|||+||+|-+|...++.+...|.  +|+++.|...............  .|..+. ++...+ .++|++|.++|.
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~-~~~d~vi~~~~~   90 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAF-QGHDVGFCCLGT   90 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGG-SSCSEEEECCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccccccccccc-cccccccccccc
Confidence            46899999999999999998888785  8999887542111111111111  222221 222222 579999999986

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.50  E-value=0.019  Score=49.03  Aligned_cols=74  Identities=16%  Similarity=0.108  Sum_probs=48.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEE--eCCCh-hHHHHhcCCccEEEECCCC
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAV--DYSSK-DIELAIKGKFDAVLDTIGA  247 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~--~~~~~-~~~~~~~~~~dvvid~~g~  247 (307)
                      ..+.+|||+||+|-+|..++..+...|.+|+++.+................  |..+. .+.+ ...++|.||.+.+.
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~d~Vih~a~~   89 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLK-VTEGVDHVFNLAAD   89 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHH-HHTTCSEEEECCCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHH-HhhcCCeEeecccc
Confidence            357899999999999999999999999999988654332222222222222  33332 2222 22679999998753

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=95.46  E-value=0.0089  Score=47.90  Aligned_cols=93  Identities=22%  Similarity=0.235  Sum_probs=64.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCC---
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIG---  246 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g---  246 (307)
                      .++++.+||=+|  .+.|..+..+++ .|++|+++..++. .+.+++.+....+..+..++. ...+.||+|+....   
T Consensus        39 ~~~~~~~vLDiG--cG~G~~~~~l~~-~~~~v~giD~s~~~l~~a~~~~~~~~~~~~~~~l~-~~~~~fD~ii~~~~~~~  114 (246)
T d2avna1          39 YLKNPCRVLDLG--GGTGKWSLFLQE-RGFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLP-FPSGAFEAVLALGDVLS  114 (246)
T ss_dssp             HCCSCCEEEEET--CTTCHHHHHHHT-TTCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCC-SCTTCEEEEEECSSHHH
T ss_pred             hcCCCCEEEEEC--CCCchhcccccc-cceEEEEeecccccccccccccccccccccccccc-cccccccceeeecchhh
Confidence            355788999888  458988888876 5999999966544 566777776666665544321 11157999986543   


Q ss_pred             ---Ch-hhHHHHHhcccCCcEEEEe
Q 021831          247 ---AP-ETERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       247 ---~~-~~~~~~~~~l~~~G~~v~~  267 (307)
                         +. ..+..+.++|+|||.++..
T Consensus       115 ~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         115 YVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             HCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hhhhHHHHHHHHHhhcCcCcEEEEE
Confidence               22 3567888899999988763

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.35  E-value=0.019  Score=45.86  Aligned_cols=99  Identities=16%  Similarity=0.072  Sum_probs=61.2

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHc-CCc------------e----------EE
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAA-GAE------------Q----------AV  223 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~-g~~------------~----------v~  223 (307)
                      ......++.+||..|  .+.|..+..+|+ .|++|+++.-++. .+.+++. +..            .          .+
T Consensus        39 ~~l~~~~~~rvLd~G--CG~G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  115 (229)
T d2bzga1          39 TFLKGKSGLRVFFPL--CGKAVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLY  115 (229)
T ss_dssp             HHHTTCCSCEEEETT--CTTCTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEE
T ss_pred             HhcCCCCCCEEEEeC--CCCcHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEE
Confidence            355778899999998  345888888876 5999999965543 4444332 111            1          11


Q ss_pred             eCCChhHHHHhcCCccEEEECCCC--------hhhHHHHHhcccCCcEEEEecc
Q 021831          224 DYSSKDIELAIKGKFDAVLDTIGA--------PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       224 ~~~~~~~~~~~~~~~dvvid~~g~--------~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      ..+..++.....+.||+|+++.--        ...+..+.++|+|||+++....
T Consensus       116 ~~d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~  169 (229)
T d2bzga1         116 CCSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVL  169 (229)
T ss_dssp             ESCGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             EcchhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEc
Confidence            111111111112579999997531        2356788999999998766553

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.32  E-value=0.11  Score=39.34  Aligned_cols=91  Identities=23%  Similarity=0.189  Sum_probs=59.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEE--------eCC--ChhHHHHhcCCccEEEEC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAV--------DYS--SKDIELAIKGKFDAVLDT  244 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~--------~~~--~~~~~~~~~~~~dvvid~  244 (307)
                      .++.|+|+ |.+|++.+..+...|..|....+.+ +.+.+++.+.....        ...  ..+..+.+ ..+|++|-+
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~aD~iii~   79 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV-KDADVILIV   79 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH-TTCSEEEEC
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHh-cCCCEEEEE
Confidence            68999996 9999999999999999999987754 34445554422111        111  12334433 569999999


Q ss_pred             CCChh---hHHHHHhcccCCcEEEEec
Q 021831          245 IGAPE---TERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       245 ~g~~~---~~~~~~~~l~~~G~~v~~g  268 (307)
                      +....   .+.++...+.++-.+++..
T Consensus        80 v~~~~~~~~~~~i~~~l~~~~~iv~~~  106 (184)
T d1bg6a2          80 VPAIHHASIAANIASYISEGQLIILNP  106 (184)
T ss_dssp             SCGGGHHHHHHHHGGGCCTTCEEEESS
T ss_pred             EchhHHHHHHHHhhhccCCCCEEEEeC
Confidence            98762   3344555666776666543

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=95.28  E-value=0.11  Score=38.89  Aligned_cols=100  Identities=17%  Similarity=0.148  Sum_probs=69.5

Q ss_pred             HHHHHHcC-CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEE
Q 021831          164 RALKCAAR-MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAV  241 (307)
Q Consensus       164 ~~l~~~~~-~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~-~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvv  241 (307)
                      .++.+..+ +-.|.+++|.| -|-+|.-+++-++.+|++|+++ .++-+.-.+.--|+ ++.     ++.+.+ +..|++
T Consensus        11 d~i~r~t~~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf-~v~-----~~~~a~-~~aDi~   82 (163)
T d1v8ba1          11 DGLMRATDFLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGF-NVV-----TLDEIV-DKGDFF   82 (163)
T ss_dssp             HHHHHHHCCCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTC-EEC-----CHHHHT-TTCSEE
T ss_pred             HHHHHHhCceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHHhcCC-ccC-----chhHcc-ccCcEE
Confidence            33333333 46899999999 7999999999999999999998 44422222222233 231     233333 558999


Q ss_pred             EECCCChhh-HHHHHhcccCCcEEEEeccCc
Q 021831          242 LDTIGAPET-ERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       242 id~~g~~~~-~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      |-++|+... -..-+..|+++..+.-+|-..
T Consensus        83 vTaTGn~~vI~~~h~~~MKdgaIl~N~GHfd  113 (163)
T d1v8ba1          83 ITCTGNVDVIKLEHLLKMKNNAVVGNIGHFD  113 (163)
T ss_dssp             EECCSSSSSBCHHHHTTCCTTCEEEECSSTT
T ss_pred             EEcCCCCccccHHHHHHhhCCeEEEeccccc
Confidence            999999743 355678899999988888654

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.21  E-value=0.053  Score=40.66  Aligned_cols=88  Identities=8%  Similarity=0.021  Sum_probs=57.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCCh---hhHH
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAP---ETER  252 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~---~~~~  252 (307)
                      +|.|+| .|.+|...+..++..|.+|++..+++ ..+.+++.+.........+    .+ ...|+||-++...   ..++
T Consensus         2 kI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~----~~-~~~DiIilavp~~~~~~vl~   75 (165)
T d2f1ka2           2 KIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLS----LL-QTAKIIFLCTPIQLILPTLE   75 (165)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGG----GG-TTCSEEEECSCHHHHHHHHH
T ss_pred             EEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecc----cc-cccccccccCcHhhhhhhhh
Confidence            688999 59999998888889999999886654 3455777775322221111    11 4588888888754   1334


Q ss_pred             HHHhcccCCcEEEEeccC
Q 021831          253 LGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       253 ~~~~~l~~~G~~v~~g~~  270 (307)
                      .+...+.++-.++.++..
T Consensus        76 ~l~~~l~~~~iv~~~~s~   93 (165)
T d2f1ka2          76 KLIPHLSPTAIVTDVASV   93 (165)
T ss_dssp             HHGGGSCTTCEEEECCSC
T ss_pred             hhhhhcccccceeecccc
Confidence            445555666666666643

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.19  E-value=0.015  Score=41.10  Aligned_cols=75  Identities=15%  Similarity=0.220  Sum_probs=46.7

Q ss_pred             CCCC-CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCc-eEEeCCChhHHHHh-c-CCccEE---EEC
Q 021831          172 MSEG-QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE-QAVDYSSKDIELAI-K-GKFDAV---LDT  244 (307)
Q Consensus       172 ~~~g-~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~-~-~~~dvv---id~  244 (307)
                      +.++ .+|.|+|+ |.+|.+.++.|+.+|.++++...+++.- +...... .+.++++.+....+ . .+.|+|   ||.
T Consensus         7 ~~~~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~P-A~~va~~~i~~~~~d~~~l~~~~~~~~~DviT~E~En   84 (111)
T d1kjqa2           7 LRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAP-AMHVAHRSHVINMLDGDALRRVVELEKPHYIVPEIEA   84 (111)
T ss_dssp             TSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCG-GGGGSSEEEECCTTCHHHHHHHHHHHCCSEEEECSSC
T ss_pred             CCCCCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCc-hhhcCCeEEECCCCCHHHHHHHHHhhCCceEEEEecC
Confidence            3444 56999995 9999999999999999999887654421 1222222 23345554433322 2 357877   555


Q ss_pred             CCCh
Q 021831          245 IGAP  248 (307)
Q Consensus       245 ~g~~  248 (307)
                      +...
T Consensus        85 I~~~   88 (111)
T d1kjqa2          85 IATD   88 (111)
T ss_dssp             SCHH
T ss_pred             cCHH
Confidence            5544

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=95.02  E-value=0.0063  Score=46.67  Aligned_cols=92  Identities=16%  Similarity=0.176  Sum_probs=55.0

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HHHHHcC---CceEEeCCChhHHHHhcCCccEEEECCC
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAG---AEQAVDYSSKDIELAIKGKFDAVLDTIG  246 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~~~~~g---~~~v~~~~~~~~~~~~~~~~dvvid~~g  246 (307)
                      ..++.+|+|.|+ |+.+.+++..+...+.+++.+.|+.+.  ...+.++   ........     +.....+|++|+|++
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~-----~~~~~~~diiIN~tp   88 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMD-----SIPLQTYDLVINATS   88 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG-----GCCCSCCSEEEECCC
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhc-----cccccccceeeeccc
Confidence            347889999995 888999888777766688877777543  2233333   22222221     111256999999988


Q ss_pred             Chhh---HHHHHhcccCCcEEEEecc
Q 021831          247 APET---ERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       247 ~~~~---~~~~~~~l~~~G~~v~~g~  269 (307)
                      ....   ...-...++++..++.+-.
T Consensus        89 ~g~~~~~~~~~~~~~~~~~~~~D~vy  114 (171)
T d1p77a1          89 AGLSGGTASVDAEILKLGSAFYDMQY  114 (171)
T ss_dssp             C-------CCCHHHHHHCSCEEESCC
T ss_pred             ccccccccchhhhhhcccceeeeeec
Confidence            5311   1112234556777777665

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.01  E-value=0.067  Score=41.15  Aligned_cols=89  Identities=20%  Similarity=0.128  Sum_probs=63.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChh----
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE----  249 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~----  249 (307)
                      .|.++.|.| .|.+|...+++++.+|++|++..+..+.......+....      ++.+.+ ...|+|+-+++...    
T Consensus        43 ~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~------~l~ell-~~sDiv~~~~Plt~~T~~  114 (184)
T d1ygya1          43 FGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELL------SLDDLL-ARADFISVHLPKTPETAG  114 (184)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEEC------CHHHHH-HHCSEEEECCCCSTTTTT
T ss_pred             cceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhhcCceec------cHHHHH-hhCCEEEEcCCCCchhhh
Confidence            478999999 599999999999999999999877665555555554311      222222 23788888776431    


Q ss_pred             -hHHHHHhcccCCcEEEEeccC
Q 021831          250 -TERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       250 -~~~~~~~~l~~~G~~v~~g~~  270 (307)
                       .-...+..|+++..+|-++-.
T Consensus       115 lin~~~l~~mk~~a~lIN~sRG  136 (184)
T d1ygya1         115 LIDKEALAKTKPGVIIVNAARG  136 (184)
T ss_dssp             CBCHHHHTTSCTTEEEEECSCT
T ss_pred             hhhHHHHhhhCCCceEEEecch
Confidence             124677888898888888854

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.99  E-value=0.047  Score=42.41  Aligned_cols=90  Identities=20%  Similarity=0.157  Sum_probs=59.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChh----
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE----  249 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~----  249 (307)
                      .|.+|.|+| .|.+|..+++.++.+|++|+...+..........+....     .++.+.+ ...|+|+-+++...    
T Consensus        48 ~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~-----~~l~~ll-~~sD~i~~~~plt~~T~~  120 (193)
T d1mx3a1          48 RGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRV-----STLQDLL-FHSDCVTLHCGLNEHNHH  120 (193)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEEC-----SSHHHHH-HHCSEEEECCCCCTTCTT
T ss_pred             eCceEEEec-cccccccceeeeeccccceeeccCcccccchhhhccccc-----cchhhcc-ccCCEEEEeecccccchh
Confidence            578999999 599999999999999999999876544444444443211     1222222 22688777665321    


Q ss_pred             -hHHHHHhcccCCcEEEEeccC
Q 021831          250 -TERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       250 -~~~~~~~~l~~~G~~v~~g~~  270 (307)
                       .-...+..|+++..+|-++-.
T Consensus       121 li~~~~l~~mk~~a~lIN~sRG  142 (193)
T d1mx3a1         121 LINDFTVKQMRQGAFLVNTARG  142 (193)
T ss_dssp             SBSHHHHTTSCTTEEEEECSCT
T ss_pred             hhhHHHHhccCCCCeEEecCCc
Confidence             123566788888888887754

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.97  E-value=0.0096  Score=47.76  Aligned_cols=94  Identities=20%  Similarity=0.206  Sum_probs=57.6

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcC----Cc-eEEeCCChhHHHHhc-CCccEE-EEC
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAG----AE-QAVDYSSKDIELAIK-GKFDAV-LDT  244 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g----~~-~v~~~~~~~~~~~~~-~~~dvv-id~  244 (307)
                      .+|.+||-+|  .+.|..+..+++..+.+|+++.-+. -.+.+++..    .. ..+............ +.||.+ +|.
T Consensus        52 ~~g~~VLdIG--cG~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~fD~  129 (229)
T d1zx0a1          52 SKGGRVLEVG--FGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDT  129 (229)
T ss_dssp             TTCEEEEEEC--CTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECC
T ss_pred             cCCCeEEEee--ccchHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccccccccccccccccccccceeecc
Confidence            5789999999  5678888888887667888885443 344444322    11 122222122222222 579887 465


Q ss_pred             CCCh----------hhHHHHHhcccCCcEEEEec
Q 021831          245 IGAP----------ETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       245 ~g~~----------~~~~~~~~~l~~~G~~v~~g  268 (307)
                      ....          ..+..+.+.|+|||+++.+.
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~~  163 (229)
T d1zx0a1         130 YPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  163 (229)
T ss_dssp             CCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             cccccccccccCHHHHHHHHHHHcCCCcEEEEEe
Confidence            4431          14566888999999998754

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.89  E-value=0.037  Score=48.19  Aligned_cols=105  Identities=16%  Similarity=0.131  Sum_probs=65.8

Q ss_pred             HHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCccH-HH----HHHc-------C----CceEE
Q 021831          161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DR----VLAA-------G----AEQAV  223 (307)
Q Consensus       161 ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~~-~~----~~~~-------g----~~~v~  223 (307)
                      ...+.+. ..++++|+++|=+|  +++|..+.++|+..|+ +|+++.-++.. +.    ++++       +    .....
T Consensus       204 ~i~~Il~-~l~Lkpgd~fLDLG--CG~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~  280 (406)
T d1u2za_         204 FLSDVYQ-QCQLKKGDTFMDLG--SGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFS  280 (406)
T ss_dssp             HHHHHHH-HTTCCTTCEEEEES--CTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEE
T ss_pred             HHHHHHH-HhCCCCCCEEEeCC--CCCcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceee
Confidence            3555564 78999999999888  6789999999999997 89999655431 21    1211       1    11111


Q ss_pred             eCC---ChhHHHHhcCCccEEEECCC--Ch---hhHHHHHhcccCCcEEEEec
Q 021831          224 DYS---SKDIELAIKGKFDAVLDTIG--AP---ETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       224 ~~~---~~~~~~~~~~~~dvvid~~g--~~---~~~~~~~~~l~~~G~~v~~g  268 (307)
                      ...   ..+........+|+++-...  .+   ..+..+.+.|+|||++|..-
T Consensus       281 ~~~~f~~~~~~d~~~~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         281 LKKSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             ESSCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             eeechhhccccccccccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence            111   12222222245788875321  22   25667888999999999853

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.88  E-value=0.1  Score=39.28  Aligned_cols=96  Identities=17%  Similarity=0.215  Sum_probs=67.0

Q ss_pred             ccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CccHHHHHHcCCceEEeCCChhHH
Q 021831          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSIDRVLAAGAEQAVDYSSKDIE  231 (307)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~~~  231 (307)
                      ..+++.....+..++...---.|.+|+|.|-+..+|.-.+.++...|++|+...+ +.+.                   .
T Consensus        15 ~~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l-------------------~   75 (166)
T d1b0aa1          15 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNL-------------------R   75 (166)
T ss_dssp             SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCH-------------------H
T ss_pred             CCCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhccccccccccchh-------------------H
Confidence            4556666666666664443347999999999999999999999999999876632 2221                   1


Q ss_pred             HHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       232 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      +.+ ...|++|-++|.+..+.  -..++++..+|.+|..
T Consensus        76 ~~~-~~ADivI~a~G~p~~i~--~~~vk~g~vvIDvGi~  111 (166)
T d1b0aa1          76 HHV-ENADLLIVAVGKPGFIP--GDWIKEGAIVIDVGIN  111 (166)
T ss_dssp             HHH-HHCSEEEECSCCTTCBC--TTTSCTTCEEEECCCE
T ss_pred             HHH-hhhhHhhhhccCccccc--ccccCCCcEEEecCce
Confidence            111 23789999998774433  3467888888888864

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.88  E-value=0.33  Score=35.05  Aligned_cols=72  Identities=25%  Similarity=0.357  Sum_probs=46.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHH-cCCEEEEEeC-CccHHHHHHcCCceEEeCCChh-HHHHhc----CCccEEEECCCCh
Q 021831          177 RLLVLGGGGAVGFAAVQFSVA-SGCHVSATCG-SKSIDRVLAAGAEQAVDYSSKD-IELAIK----GKFDAVLDTIGAP  248 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~-~G~~Vi~~~~-~~~~~~~~~~g~~~v~~~~~~~-~~~~~~----~~~dvvid~~g~~  248 (307)
                      +|.|.|++|.+|+..++.... .++++.+..+ .+........+++-++|.+.++ ..+.+.    .+..+|+-++|-.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~~~~~DvvIDFS~p~~~~~~~~~~~~~~~~~ViGTTG~~   79 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFT   79 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHHTTTCSEEEECCCTTTHHHHHHHHHHTTCEEEECCCCCC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhccccCCEEEEcccHHHHHHHHHHHHhcCCCEEEeccccc
Confidence            589999999999998887754 5678777644 3334444445567777776653 222222    4666777777654

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.77  E-value=0.11  Score=37.27  Aligned_cols=90  Identities=12%  Similarity=0.079  Sum_probs=58.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHH-HcCCceEEeC--CChhHHHHhc-CCccEEEECCCChhh-
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVL-AAGAEQAVDY--SSKDIELAIK-GKFDAVLDTIGAPET-  250 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~-~~g~~~v~~~--~~~~~~~~~~-~~~dvvid~~g~~~~-  250 (307)
                      +|+|.|+ |.+|+..++.+...|..|+++..+. ..+.+. +++.. ++..  .+.+..+... ..+|.++-++++.+. 
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~-vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d~~N   79 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDAL-VINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN   79 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSE-EEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhh-hccCcccchhhhhhcChhhhhhhcccCCcHHHH
Confidence            6899995 9999999999999999998886554 344444 45543 4443  3344444443 579999999988632 


Q ss_pred             --HHHHHhcccCCcEEEEec
Q 021831          251 --ERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       251 --~~~~~~~l~~~G~~v~~g  268 (307)
                        .....+.+.+.-.++.+.
T Consensus        80 ~~~~~~~k~~~~~~iI~~~~   99 (132)
T d1lssa_          80 LMSSLLAKSYGINKTIARIS   99 (132)
T ss_dssp             HHHHHHHHHTTCCCEEEECS
T ss_pred             HHHHHHHHHcCCceEEEEec
Confidence              122334455554443333

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.59  E-value=0.09  Score=40.89  Aligned_cols=88  Identities=13%  Similarity=0.063  Sum_probs=59.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChh----
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE----  249 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~----  249 (307)
                      .|.+|.|+| .|.+|..++++++.+|++|++..+..+.... ..+..    .  .++.+.+ ...|+++.++....    
T Consensus        42 ~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~-~~~~~----~--~~l~~~l-~~sDii~~~~plt~~T~~  112 (197)
T d1j4aa1          42 RDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELE-KKGYY----V--DSLDDLY-KQADVISLHVPDVPANVH  112 (197)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHH-HTTCB----C--SCHHHHH-HHCSEEEECSCCCGGGTT
T ss_pred             cCCeEEEec-ccccchhHHHhHhhhcccccccCcccccccc-cceee----e--ccccccc-cccccccccCCccccccc
Confidence            488999999 6999999999999999999988655443322 22211    1  1233322 23788888876421    


Q ss_pred             -hHHHHHhcccCCcEEEEeccC
Q 021831          250 -TERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       250 -~~~~~~~~l~~~G~~v~~g~~  270 (307)
                       .-...+..|+++..+|-++-.
T Consensus       113 li~~~~l~~mk~~a~lIN~sRG  134 (197)
T d1j4aa1         113 MINDESIAKMKQDVVIVNVSRG  134 (197)
T ss_dssp             CBSHHHHHHSCTTEEEEECSCG
T ss_pred             cccHHHHhhhCCccEEEecCch
Confidence             125567788888888888754

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.52  E-value=0.012  Score=49.47  Aligned_cols=68  Identities=16%  Similarity=0.177  Sum_probs=44.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC--CccHHHHHHcCC---ceEEeCCChhHHHHhcCCccEEEECCC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCG--SKSIDRVLAAGA---EQAVDYSSKDIELAIKGKFDAVLDTIG  246 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~--~~~~~~~~~~g~---~~v~~~~~~~~~~~~~~~~dvvid~~g  246 (307)
                      .+|||+||+|-+|...+..+...|.+|+++.+  +.+...+...-.   -.+.+.+   ..+.+..++|+||.+++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~~~d~VihlAa   74 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHD---VVEPLYIEVDQIYHLAS   74 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECC---TTSCCCCCCSEEEECCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehH---HHHHHHcCCCEEEECcc
Confidence            57999999999999999999889999999854  222222222111   1233322   22222246999999875

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.51  E-value=0.036  Score=44.32  Aligned_cols=98  Identities=21%  Similarity=0.201  Sum_probs=63.3

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCcc-HHHHH----HcCCceEEeCCChhHHH--HhcCCcc
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKS-IDRVL----AAGAEQAVDYSSKDIEL--AIKGKFD  239 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~~~~~~-~~~~~----~~g~~~v~~~~~~~~~~--~~~~~~d  239 (307)
                      ...++||++||=.|+  +.|..+..+++..|-  +|+++..+++ .+.++    ..+....+..+......  .....+|
T Consensus        68 ~l~i~pG~~VLDlGa--GsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~vD  145 (227)
T d1g8aa_          68 NFPIKPGKSVLYLGI--ASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVD  145 (227)
T ss_dssp             CCCCCTTCEEEEETT--TSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEE
T ss_pred             ccccCCCCEEEEecc--CCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcccccccccceE
Confidence            457899999999995  468888899988763  9999966554 33332    22322223333222111  1125689


Q ss_pred             EEEECCCCh----hhHHHHHhcccCCcEEEEec
Q 021831          240 AVLDTIGAP----ETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       240 vvid~~g~~----~~~~~~~~~l~~~G~~v~~g  268 (307)
                      +++......    ..+..+...|++||+++.+-
T Consensus       146 ~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~~  178 (227)
T d1g8aa_         146 VIFEDVAQPTQAKILIDNAEVYLKRGGYGMIAV  178 (227)
T ss_dssp             EEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEEEccccchHHHHHHHHHHhcccCCeEEEEE
Confidence            888765532    25778888999999988753

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=94.37  E-value=0.08  Score=42.50  Aligned_cols=33  Identities=15%  Similarity=0.187  Sum_probs=29.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK  209 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~  209 (307)
                      .|||+||++++|++.++.+...|++|+.+.+++
T Consensus         3 VvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~   35 (257)
T d1fjha_           3 IIVISGCATGIGAATRKVLEAAGHQIVGIDIRD   35 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence            479999999999999999999999998886543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=94.37  E-value=0.074  Score=43.52  Aligned_cols=73  Identities=18%  Similarity=0.283  Sum_probs=47.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc------HHH---HHHcCCceE-EeCCChhHHHHhcCCccEEEEC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS------IDR---VLAAGAEQA-VDYSSKDIELAIKGKFDAVLDT  244 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~------~~~---~~~~g~~~v-~~~~~~~~~~~~~~~~dvvid~  244 (307)
                      -.+|||+||+|-+|...+..+...|.+|++++|+..      ...   +...+.+.+ .|..+.+.......+.+.++.+
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~   82 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   82 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhh
Confidence            357999999999999999999889999999877542      111   223344322 1233333333333567888887


Q ss_pred             CCC
Q 021831          245 IGA  247 (307)
Q Consensus       245 ~g~  247 (307)
                      .+.
T Consensus        83 ~~~   85 (312)
T d1qyda_          83 LAG   85 (312)
T ss_dssp             CCC
T ss_pred             hhh
Confidence            653

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.31  E-value=0.19  Score=37.89  Aligned_cols=97  Identities=16%  Similarity=0.225  Sum_probs=67.8

Q ss_pred             ccccchHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHH
Q 021831          153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL  232 (307)
Q Consensus       153 a~~~~~~~ta~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~  232 (307)
                      +.+++.....+..++...---.|.+|+|+|-+..+|.-.+.++...|+.|........                  +..+
T Consensus        17 ~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~------------------~l~~   78 (170)
T d1a4ia1          17 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA------------------HLDE   78 (170)
T ss_dssp             CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS------------------SHHH
T ss_pred             CCCCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccc------------------cHHH
Confidence            4566666667777764333347999999999999999999999999999987643221                  1111


Q ss_pred             HhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccC
Q 021831          233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       233 ~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      .. ...|+++-++|.+..+.  -..++++-.++.+|..
T Consensus        79 ~~-~~aDivi~a~G~~~~i~--~~~vk~g~iviDvgi~  113 (170)
T d1a4ia1          79 EV-NKGDILVVATGQPEMVK--GEWIKPGAIVIDCGIN  113 (170)
T ss_dssp             HH-TTCSEEEECCCCTTCBC--GGGSCTTCEEEECCCB
T ss_pred             HH-hhccchhhccccccccc--cccccCCCeEeccCcc
Confidence            11 34788888888874433  3577888888888853

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.30  E-value=0.047  Score=42.75  Aligned_cols=46  Identities=24%  Similarity=0.390  Sum_probs=36.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAE  220 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~  220 (307)
                      .|.+|+|.| .|.+|..+++++...|++|++.... .+......++.+
T Consensus        26 ~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g~~   72 (201)
T d1c1da1          26 DGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHT   72 (201)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhhccc
Confidence            689999999 6999999999999999999877443 344455666654

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.29  E-value=0.04  Score=43.15  Aligned_cols=93  Identities=16%  Similarity=0.134  Sum_probs=58.1

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHH----HHcCCc-eEEeCCChhHHHHhcCCccEEEEC
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRV----LAAGAE-QAVDYSSKDIELAIKGKFDAVLDT  244 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~dvvid~  244 (307)
                      .++++++||=+|.  +.|..+..+++ .|.+|+++.-+.. .+.+    ...+.. ..+..+..++. .-.+.||+|+..
T Consensus        34 ~l~~~~~ILDiGc--G~G~~~~~la~-~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~-~~~~~fD~I~~~  109 (226)
T d1ve3a1          34 YMKKRGKVLDLAC--GVGGFSFLLED-YGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS-FEDKTFDYVIFI  109 (226)
T ss_dssp             SCCSCCEEEEETC--TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC-SCTTCEEEEEEE
T ss_pred             hcCCCCEEEEECC--CcchhhhhHhh-hhcccccccccccchhhhhhhhcccccccccccccccccc-ccCcCceEEEEe
Confidence            4678899999994  46888888886 4889999966544 3333    233322 22332222211 011479998875


Q ss_pred             CCC-----h---hhHHHHHhcccCCcEEEEe
Q 021831          245 IGA-----P---ETERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       245 ~g~-----~---~~~~~~~~~l~~~G~~v~~  267 (307)
                      ..-     .   ..+..+.+.|+|||+++..
T Consensus       110 ~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         110 DSIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             SCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            431     1   2467788899999998764

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.22  E-value=0.024  Score=42.06  Aligned_cols=90  Identities=14%  Similarity=0.118  Sum_probs=51.6

Q ss_pred             EEEEEcCCchHHHHHHHH-HHHcCC---EEEEEeCCccHHH--HHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhh
Q 021831          177 RLLVLGGGGAVGFAAVQF-SVASGC---HVSATCGSKSIDR--VLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET  250 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~-a~~~G~---~Vi~~~~~~~~~~--~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~  250 (307)
                      +|.|.||+|.+|+-.+++ +.+...   ++....+++....  ........+.+..+.  .. . .++|++|-|+++..+
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~--~~-~-~~~DivF~a~~~~~s   78 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDL--EA-L-KALDIIVTCQGGDYT   78 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCH--HH-H-HTCSEEEECSCHHHH
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccch--hh-h-hcCcEEEEecCchHH
Confidence            689999999999999975 444332   5555554433211  111111122222221  11 1 358999999999855


Q ss_pred             HHHHHhcccCC--cEEEEeccC
Q 021831          251 ERLGLNFLKRG--GHYMTLHGE  270 (307)
Q Consensus       251 ~~~~~~~l~~~--G~~v~~g~~  270 (307)
                      ...+-.+...|  ..+|+.+..
T Consensus        79 ~~~~~~~~~~g~~~~VID~Ss~  100 (146)
T d1t4ba1          79 NEIYPKLRESGWQGYWIDAASS  100 (146)
T ss_dssp             HHHHHHHHHTTCCCEEEECSST
T ss_pred             HHhhHHHHhcCCCeecccCCcc
Confidence            55555555554  457777754

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.21  E-value=0.1  Score=40.87  Aligned_cols=98  Identities=17%  Similarity=0.173  Sum_probs=61.3

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCcc-HHH----HHHcCCceEEeCCChh--HHHHhcCCccE
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDR----VLAAGAEQAVDYSSKD--IELAIKGKFDA  240 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~-~~~----~~~~g~~~v~~~~~~~--~~~~~~~~~dv  240 (307)
                      ...++||++||=.|+  +.|..+..+++..+. +|+++.-+.+ .+.    ++..+-...+..+..+  ........+|+
T Consensus        51 ~l~lkpg~~VLDlGc--G~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~  128 (209)
T d1nt2a_          51 RLKLRGDERVLYLGA--ASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDL  128 (209)
T ss_dssp             CCCCCSSCEEEEETC--TTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEE
T ss_pred             cCCCCCCCEEEEeCC--cCCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccccccceEEE
Confidence            467899999999995  456677777877654 8999966543 222    3444432232222222  11111146788


Q ss_pred             EEECCCCh----hhHHHHHhcccCCcEEEEec
Q 021831          241 VLDTIGAP----ETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       241 vid~~g~~----~~~~~~~~~l~~~G~~v~~g  268 (307)
                      ++......    ..+..+.+.|++||+++.+-
T Consensus       129 v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  160 (209)
T d1nt2a_         129 IYQDIAQKNQIEILKANAEFFLKEKGEVVIMV  160 (209)
T ss_dssp             EEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEecccChhhHHHHHHHHHHHhccCCeEEEEE
Confidence            87765432    25677888999999998764

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=94.12  E-value=0.047  Score=39.35  Aligned_cols=93  Identities=16%  Similarity=0.099  Sum_probs=58.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHHHHHcCCceEE-eCCChhHHHHhc-CCccEEEECCCChhhHHH
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDRVLAAGAEQAV-DYSSKDIELAIK-GKFDAVLDTIGAPETERL  253 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~~~~~g~~~v~-~~~~~~~~~~~~-~~~dvvid~~g~~~~~~~  253 (307)
                      +++|+|. |.+|..+++.+...|..|+++... +..+.++..+...++ |..+.+..+... ..+|.+|-++++......
T Consensus         2 ~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~~~~~~   80 (134)
T d2hmva1           2 QFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQAST   80 (134)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSCHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEcCchHHhHH
Confidence            5788995 999999999999999998888554 444556666653322 233344444432 468999988886522222


Q ss_pred             ---HHhcccCCcEEEEeccC
Q 021831          254 ---GLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       254 ---~~~~l~~~G~~v~~g~~  270 (307)
                         ....+.+..+++.....
T Consensus        81 ~~~~~~~~~~~~~iiar~~~  100 (134)
T d2hmva1          81 LTTLLLKELDIPNIWVKAQN  100 (134)
T ss_dssp             HHHHHHHHTTCSEEEEECCS
T ss_pred             HHHHHHHHcCCCcEEeeccc
Confidence               22233455666655443

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=94.09  E-value=0.12  Score=39.07  Aligned_cols=92  Identities=14%  Similarity=0.188  Sum_probs=61.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHH---HHHHcCC-------c---------------eEEeCCChhHH
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSID---RVLAAGA-------E---------------QAVDYSSKDIE  231 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~---~~~~~g~-------~---------------~v~~~~~~~~~  231 (307)
                      +|.|+| -|.+|.++.+.+...+.+++++-+....+   .+.+..-       .               .+....++   
T Consensus         2 kigING-fGRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p---   77 (168)
T d2g82a1           2 KVGING-FGRIGRQVFRILHSRGVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDP---   77 (168)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSG---
T ss_pred             EEEEEC-CcHHHHHHHHHHhcCCCEEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCCh---
Confidence            588999 79999999999888889988885544432   2333321       0               11111111   


Q ss_pred             HHhc---CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          232 LAIK---GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       232 ~~~~---~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      +.+.   .++|+|+||+|.....+.+...+..|-+=|.+..|..
T Consensus        78 ~~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~k  121 (168)
T d2g82a1          78 KEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAK  121 (168)
T ss_dssp             GGCCTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB
T ss_pred             HHCcccccCCceeEeccccccchHHhhhhhccccceeeeccccc
Confidence            1111   3799999999987677888888888777777777754

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=93.95  E-value=0.19  Score=37.58  Aligned_cols=90  Identities=14%  Similarity=0.029  Sum_probs=57.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCc-cHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChh---h
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE---T  250 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~---~  250 (307)
                      +|+|+| .|.+|...+..++..|.  +|++..++. ..+.+++.+...........   ......|+||-|+....   .
T Consensus         3 ~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~dlIila~p~~~~~~v   78 (171)
T d2g5ca2           3 NVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAK---VEDFSPDFVMLSSPVRTFREI   78 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGG---GGGTCCSEEEECSCHHHHHHH
T ss_pred             EEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhh---hhccccccccccCCchhhhhh
Confidence            699999 59999999988888885  788886554 45667777753222222111   11134788888877542   2


Q ss_pred             HHHHHhcccCCcEEEEeccC
Q 021831          251 ERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~~  270 (307)
                      +..+...+.++-.++.++..
T Consensus        79 l~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          79 AKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhccccccccccccccc
Confidence            33445566677777777654

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=93.93  E-value=0.038  Score=46.67  Aligned_cols=39  Identities=31%  Similarity=0.392  Sum_probs=34.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK  209 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~  209 (307)
                      -+++|.+|||+||+|-+|...++.+...|.+|+++.++.
T Consensus         7 ~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~   45 (342)
T d1y1pa1           7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSA   45 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred             CCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCc
Confidence            467899999999999999999998888899999988764

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.89  E-value=0.075  Score=38.28  Aligned_cols=30  Identities=13%  Similarity=0.211  Sum_probs=26.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEe
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATC  206 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~  206 (307)
                      +|.|+|++|.+|++..+++...+.+++...
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~i   31 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKV   31 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEE
Confidence            689999999999999999999998777653

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=93.85  E-value=0.19  Score=37.43  Aligned_cols=92  Identities=17%  Similarity=0.221  Sum_probs=57.5

Q ss_pred             CEEEEEcCCchHHH-HHHHHHHHcCC-EEEEEeCCc--c--HHHHHHcCCceEEeCCChhHHHHhc-CCccEEEECCCCh
Q 021831          176 QRLLVLGGGGAVGF-AAVQFSVASGC-HVSATCGSK--S--IDRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAP  248 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~-~~~~~a~~~G~-~Vi~~~~~~--~--~~~~~~~g~~~v~~~~~~~~~~~~~-~~~dvvid~~g~~  248 (307)
                      -+|.|+| +|.+|. ...++.+.... +++++++.+  .  ..++++++.... +...+++.+... .++|+||+++...
T Consensus         5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~-~~~~d~l~~~~~~~~iDiVf~ATpag   82 (157)
T d1nvmb1           5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTT-YAGVEGLIKLPEFADIDFVFDATSAS   82 (157)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEE-SSHHHHHHHSGGGGGEEEEEECSCHH
T ss_pred             cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCccc-ccceeeeeecccccccCEEEEcCCch
Confidence            4789999 699986 56778776655 777775432  2  345677776532 111123333222 4699999999865


Q ss_pred             hhHHH--HHhcccCCcEEEEecc
Q 021831          249 ETERL--GLNFLKRGGHYMTLHG  269 (307)
Q Consensus       249 ~~~~~--~~~~l~~~G~~v~~g~  269 (307)
                      .....  +.+.++.|=+++....
T Consensus        83 ~h~~~~~~~~aa~~G~~VID~s~  105 (157)
T d1nvmb1          83 AHVQNEALLRQAKPGIRLIDLTP  105 (157)
T ss_dssp             HHHHHHHHHHHHCTTCEEEECST
T ss_pred             hHHHhHHHHHHHHcCCEEEEccc
Confidence            44443  3445666667777665

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=93.66  E-value=0.031  Score=41.82  Aligned_cols=92  Identities=16%  Similarity=0.174  Sum_probs=59.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC---EEEEEeCCccHHHHHHcCCc--eEEeCCChhHHHHhcCCccEEEECCCChh
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGC---HVSATCGSKSIDRVLAAGAE--QAVDYSSKDIELAIKGKFDAVLDTIGAPE  249 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~---~Vi~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~dvvid~~g~~~  249 (307)
                      |-+|.|.||+|-+|+-.++++..+..   ++....+++...........  ...+..+.+     ....|++|-+.+...
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~~~~~~~~~~~~~~-----~~~~d~~f~~~~~~~   75 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETA-----FEGVDIALFSAGSST   75 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEETTEEEEEEECCTTT-----TTTCSEEEECSCHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccccccCCcccccccchhh-----hhhhhhhhhccCccc
Confidence            45899999999999999999988864   33333333221110001111  111111111     145899999999887


Q ss_pred             hHHHHHhcccCCcEEEEeccCc
Q 021831          250 TERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +...+...+..+-++|+.+...
T Consensus        76 s~~~~~~~~~~~~~VIDlSsdf   97 (154)
T d2gz1a1          76 SAKYAPYAVKAGVVVVDNTSYF   97 (154)
T ss_dssp             HHHHHHHHHHTTCEEEECSSTT
T ss_pred             hhhHHhhhccccceehhcChhh
Confidence            7777778888999999999763

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.64  E-value=0.021  Score=42.35  Aligned_cols=93  Identities=14%  Similarity=0.105  Sum_probs=58.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcC---CEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhHH
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASG---CHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETER  252 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G---~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~~  252 (307)
                      -+|.|.||+|-+|+-.++++..++   .++..+.+++.............. ..  +.......+.|++|-+.+...+..
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~-~~--~~~~~~~~~~d~vf~a~p~~~s~~   79 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLR-VG--DVDSFDFSSVGLAFFAAAAEVSRA   79 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEE-CE--EGGGCCGGGCSEEEECSCHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccch-hc--cchhhhhccceEEEecCCcchhhh
Confidence            468999999999999999997543   366655444332110011111111 10  111111135899999999886777


Q ss_pred             HHHhcccCCcEEEEeccCc
Q 021831          253 LGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       253 ~~~~~l~~~G~~v~~g~~~  271 (307)
                      ..-.....+-++|+.++..
T Consensus        80 ~~~~~~~~g~~VID~Ss~f   98 (144)
T d2hjsa1          80 HAERARAAGCSVIDLSGAL   98 (144)
T ss_dssp             HHHHHHHTTCEEEETTCTT
T ss_pred             hccccccCCceEEeechhh
Confidence            7777788899999988753

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=93.61  E-value=0.13  Score=39.40  Aligned_cols=85  Identities=16%  Similarity=0.248  Sum_probs=60.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChh----
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE----  249 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~----  249 (307)
                      .|.+|.|+| .|.+|...+++++.+|++|++..+..+.      +.....    .++.+.+ ...|+|+.++....    
T Consensus        41 ~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~------~~~~~~----~~l~ell-~~sDiv~~~~pl~~~t~~  108 (181)
T d1qp8a1          41 QGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKE------GPWRFT----NSLEEAL-REARAAVCALPLNKHTRG  108 (181)
T ss_dssp             TTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCC------SSSCCB----SCSHHHH-TTCSEEEECCCCSTTTTT
T ss_pred             cCceEEEec-cccccccceeeeeccccccccccccccc------cceeee----echhhhh-hccchhhccccccccccc
Confidence            488999999 5999999999999999999998665431      111111    1233322 45899988876421    


Q ss_pred             -hHHHHHhcccCCcEEEEeccC
Q 021831          250 -TERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       250 -~~~~~~~~l~~~G~~v~~g~~  270 (307)
                       .-...+..|+++..+|.+|-.
T Consensus       109 li~~~~l~~mk~~ailIN~~RG  130 (181)
T d1qp8a1         109 LVKYQHLALMAEDAVFVNVGRA  130 (181)
T ss_dssp             CBCHHHHTTSCTTCEEEECSCG
T ss_pred             ccccceeeeccccceEEecccc
Confidence             125678889999999998843

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=93.60  E-value=0.13  Score=43.19  Aligned_cols=74  Identities=18%  Similarity=0.155  Sum_probs=49.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc--HHHHHHcC---CceEE--eCCChh-HHHHhc-CCccEEEEC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDRVLAAG---AEQAV--DYSSKD-IELAIK-GKFDAVLDT  244 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~--~~~~~~~g---~~~v~--~~~~~~-~~~~~~-~~~dvvid~  244 (307)
                      .|.+|||+||+|-+|..+++.+...|.+|+++.+...  ....+...   .-..+  |.++.+ +.+.+. ..+|+|+.+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~   86 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM   86 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence            4789999999999999999999999999999876543  12222211   11222  333333 333333 368999998


Q ss_pred             CCC
Q 021831          245 IGA  247 (307)
Q Consensus       245 ~g~  247 (307)
                      ++.
T Consensus        87 aa~   89 (356)
T d1rkxa_          87 AAQ   89 (356)
T ss_dssp             CSC
T ss_pred             hcc
Confidence            874

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.59  E-value=0.028  Score=47.29  Aligned_cols=91  Identities=18%  Similarity=0.196  Sum_probs=52.3

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCccHHH----HHHcCCc---eEEeCCChhHHHHhcCCccEEE
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSIDR----VLAAGAE---QAVDYSSKDIELAIKGKFDAVL  242 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~~~~----~~~~g~~---~v~~~~~~~~~~~~~~~~dvvi  242 (307)
                      .+.+|++||-+|+ | .|.++..+|+ .|+ +|+++..++....    .+..+..   .++..+..++.. -...+|+|+
T Consensus        30 ~~~~~~~VLDiGc-G-~G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~~~~-~~~~~D~iv  105 (316)
T d1oria_          30 HLFKDKVVLDVGS-G-TGILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVEL-PVEKVDIII  105 (316)
T ss_dssp             HHHTTCEEEEETC-T-TSHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCC-SSSCEEEEE
T ss_pred             ccCCcCEEEEEec-C-CcHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHHccc-ccceeEEEe
Confidence            4557999999984 3 4777666555 687 7998865544322    3334432   233333222110 014799987


Q ss_pred             ECCCC---------hhhHHHHHhcccCCcEEE
Q 021831          243 DTIGA---------PETERLGLNFLKRGGHYM  265 (307)
Q Consensus       243 d~~g~---------~~~~~~~~~~l~~~G~~v  265 (307)
                      .-...         ...+...-++|+|+|+++
T Consensus       106 s~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_         106 SEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             ECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             eeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            63221         113345567999999886

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.57  E-value=0.66  Score=33.72  Aligned_cols=96  Identities=11%  Similarity=0.062  Sum_probs=57.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCccHHHHHHcC-Cc----eEEeCCChhHHHHhcCCccEEEECCCCh
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSIDRVLAAG-AE----QAVDYSSKDIELAIKGKFDAVLDTIGAP  248 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~~~~~~~~~~~~~g-~~----~v~~~~~~~~~~~~~~~~dvvid~~g~~  248 (307)
                      .+|.|+||+|.+|..++.++...+.  ++..+.-.+.+..+..+. ..    .-......++.+.+ .+.|+|+-+.|.+
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~-~~aDivVitag~~   79 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCL-KGCDVVVIPAGVP   79 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHH-TTCSEEEECCSCC
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHh-CCCCEEEECCCcC
Confidence            3789999889999999999888886  455544333333332222 11    11112233444444 5699999998841


Q ss_pred             h---------------hHH---HHHhcccCCcEEEEeccCcc
Q 021831          249 E---------------TER---LGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       249 ~---------------~~~---~~~~~l~~~G~~v~~g~~~~  272 (307)
                      .               .+.   ..+..-.|.+.++.+..|-.
T Consensus        80 ~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvtNPvD  121 (144)
T d1mlda1          80 RKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVN  121 (144)
T ss_dssp             CCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHH
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchh
Confidence            0               112   22223368899999998844

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.54  E-value=0.096  Score=40.66  Aligned_cols=66  Identities=17%  Similarity=0.269  Sum_probs=43.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCccHHHHHHcCCceEEeCCChhHHHH---hcCCccEEEECCCCh
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA---IKGKFDAVLDTIGAP  248 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~---~~~~~dvvid~~g~~  248 (307)
                      .+|||+||+|-+|..++..+...|.  +|++..+.....       ..-+.....++.+.   +....|.||+++|..
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~-------~~~~~~~~~d~~~~~~~~~~~~d~vi~~~g~~   73 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-------HPRLDNPVGPLAELLPQLDGSIDTAFCCLGTT   73 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-------CTTEECCBSCHHHHGGGCCSCCSEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh-------cccccccccchhhhhhccccchheeeeeeeee
Confidence            6899999999999999998888886  676666543211       00112222233332   225789999998763

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=93.54  E-value=0.09  Score=43.61  Aligned_cols=71  Identities=23%  Similarity=0.324  Sum_probs=46.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeC---CccHHH---HHHcCCceEEeC--CCh-hHHHHhcC-CccEEEECCC
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCG---SKSIDR---VLAAGAEQAVDY--SSK-DIELAIKG-KFDAVLDTIG  246 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~---~~~~~~---~~~~g~~~v~~~--~~~-~~~~~~~~-~~dvvid~~g  246 (307)
                      +|||+||+|-+|...++.+...|.+|+++.+   ......   +...+.-.++..  .+. ++.+.+.+ ++|+||.+.+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa   81 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence            7999999999999999999889999998753   222222   333332233333  332 34444443 6899999876


Q ss_pred             C
Q 021831          247 A  247 (307)
Q Consensus       247 ~  247 (307)
                      .
T Consensus        82 ~   82 (338)
T d1orra_          82 Q   82 (338)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=93.52  E-value=0.052  Score=40.17  Aligned_cols=92  Identities=21%  Similarity=0.161  Sum_probs=52.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHH-c---CCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhHH
Q 021831          177 RLLVLGGGGAVGFAAVQFSVA-S---GCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETER  252 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~-~---G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~~  252 (307)
                      +|.|+||+|-+|+-.++++.. .   ...+....+++.......++.+........+.  ......|++|-|+++..+..
T Consensus         2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~~~~~~~~~~~~~--~~~~~~DvvF~alp~~~s~~   79 (147)
T d1mb4a1           2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAGMLHDAFDI--ESLKQLDAVITCQGGSYTEK   79 (147)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSSSCCCBCEETTCH--HHHTTCSEEEECSCHHHHHH
T ss_pred             EEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccCCcceeeecccch--hhhccccEEEEecCchHHHH
Confidence            689999999999999986543 2   24665554443211111122111111111111  11156899999999986655


Q ss_pred             HHHhcccCC--cEEEEeccC
Q 021831          253 LGLNFLKRG--GHYMTLHGE  270 (307)
Q Consensus       253 ~~~~~l~~~--G~~v~~g~~  270 (307)
                      .+-.+++.+  ..+|+.+..
T Consensus        80 ~~~~l~~~g~~~~VIDlSsd   99 (147)
T d1mb4a1          80 VYPALRQAGWKGYWIDAAST   99 (147)
T ss_dssp             HHHHHHHTTCCSEEEESSST
T ss_pred             HhHHHHHcCCceEEEeCCcc
Confidence            555555555  358887765

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=93.52  E-value=0.087  Score=42.70  Aligned_cols=72  Identities=22%  Similarity=0.279  Sum_probs=46.8

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-------HHHH---HcCCceEEeCCC--hhHHHHhcCCccEEEE
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-------DRVL---AAGAEQAVDYSS--KDIELAIKGKFDAVLD  243 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-------~~~~---~~g~~~v~~~~~--~~~~~~~~~~~dvvid  243 (307)
                      .+|||+||+|-+|..++..+...|.+|+++++....       ..+.   ..+. .++..+.  .........+.+.++.
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~vi~   82 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGA-NIVHGSIDDHASLVEAVKNVDVVIS   82 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTC-EEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCc-EEEEeecccchhhhhhhhhceeeee
Confidence            579999999999999999999999999998765321       1112   2233 3433332  2222222246888888


Q ss_pred             CCCCh
Q 021831          244 TIGAP  248 (307)
Q Consensus       244 ~~g~~  248 (307)
                      +.+..
T Consensus        83 ~~~~~   87 (307)
T d1qyca_          83 TVGSL   87 (307)
T ss_dssp             CCCGG
T ss_pred             ccccc
Confidence            88753

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.48  E-value=0.17  Score=38.64  Aligned_cols=93  Identities=19%  Similarity=0.286  Sum_probs=56.7

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH------------------------HHHHHcCCceEEeCCC
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI------------------------DRVLAAGAEQAVDYSS  227 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~------------------------~~~~~~g~~~v~~~~~  227 (307)
                      ...+.+|+|+|| |+.|+.++..+..+|.+|...-...+.                        ..++..|.+..++..-
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~~GG~l~~~~~~p~~~~~~~~~~~~~~~~~~~gV~i~l~~~V  118 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTV  118 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCC
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCccCceEEEEEeCcccchHHHHHHHHHHhhhcCCeEEEeCCEE
Confidence            355789999995 999999999999999998877443221                        1133455543333221


Q ss_pred             hhHHHHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEecc
Q 021831          228 KDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       228 ~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      ..   ....++|.||-++|... -.....-+..+.++..+|+
T Consensus       119 t~---~~~~~~d~vilAtG~~~-~~~~~pg~~~g~~v~vigg  156 (179)
T d1ps9a3         119 TA---DQLQAFDETILASGIPN-RALAQPLIDSGKTVHLIGG  156 (179)
T ss_dssp             CS---SSSCCSSEEEECCCEEC-CTTHHHHHTTTCCEEECGG
T ss_pred             cc---cccccceeEEEeecCCC-cccccchhccCCEEEEECC
Confidence            11   11146899999998752 1112223334556666664

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.47  E-value=0.22  Score=39.44  Aligned_cols=93  Identities=19%  Similarity=0.211  Sum_probs=59.4

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHH----HHcCCc-eEEeCCChhHHHHhcCCccEEE
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRV----LAAGAE-QAVDYSSKDIELAIKGKFDAVL  242 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~dvvi  242 (307)
                      ....+++.+||=+|.  +.|..+..+++ .|++|+++..+++ .+.+    ...+.. .+...+..++.  ..+.||+|+
T Consensus        36 ~~~~~~~~~iLDiGc--GtG~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~--~~~~fD~I~  110 (251)
T d1wzna1          36 EDAKREVRRVLDLAC--GTGIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA--FKNEFDAVT  110 (251)
T ss_dssp             HTCSSCCCEEEEETC--TTCHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC--CCSCEEEEE
T ss_pred             HhcCCCCCEEEEeCC--CCCccchhhcc-cceEEEEEeeccccccccccccccccccchheehhhhhcc--cccccchHh
Confidence            345567789999994  35888887776 5899999976654 2333    333332 33333322221  125799998


Q ss_pred             ECCCC---------hhhHHHHHhcccCCcEEEE
Q 021831          243 DTIGA---------PETERLGLNFLKRGGHYMT  266 (307)
Q Consensus       243 d~~g~---------~~~~~~~~~~l~~~G~~v~  266 (307)
                      ...+.         ...+..+.++|+|||.++.
T Consensus       111 ~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         111 MFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             ECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             hhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence            76432         1356788899999999876

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=93.34  E-value=0.052  Score=43.96  Aligned_cols=59  Identities=15%  Similarity=0.192  Sum_probs=41.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCCh-hHHHHhcC-CccEEEECCCC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK-DIELAIKG-KFDAVLDTIGA  247 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~-~~dvvid~~g~  247 (307)
                      .+|||+||+|-+|...+..++..|.+|+++.+.+-             |..+. .+.+.+.+ .+|+||.+.+.
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~~-------------D~~d~~~~~~~l~~~~~d~vih~a~~   62 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQDL-------------DITNVLAVNKFFNEKKPNVVINCAAH   62 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTC-------------CTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechhc-------------cCCCHHHHHHHHHHcCCCEEEeeccc
Confidence            36999999999999999999999999999876531             22222 22222322 57888887764

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.18  E-value=0.37  Score=40.28  Aligned_cols=101  Identities=16%  Similarity=0.198  Sum_probs=63.5

Q ss_pred             HHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCcc-HHHH-----------HHcCC----ceEEeCC
Q 021831          164 RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDRV-----------LAAGA----EQAVDYS  226 (307)
Q Consensus       164 ~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~-~~~~-----------~~~g~----~~v~~~~  226 (307)
                      +.+ ...+++++++||=+|  ++.|..+.++|+..++ +++++.-+.. .+.+           +..|.    -.+...+
T Consensus       142 ~~~-~~~~l~~~~~vlD~G--cG~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd  218 (328)
T d1nw3a_         142 QMI-DEIKMTDDDLFVDLG--SGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGD  218 (328)
T ss_dssp             HHH-HHSCCCTTCEEEEET--CTTSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECC
T ss_pred             HHH-HHcCCCCCCEEEEcC--CCCCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECc
Confidence            344 478899999999998  5789999999999998 7999955443 2221           11221    1233332


Q ss_pred             --ChhHHHHhcCCccEEEECCC--Ch---hhHHHHHhcccCCcEEEEec
Q 021831          227 --SKDIELAIKGKFDAVLDTIG--AP---ETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       227 --~~~~~~~~~~~~dvvid~~g--~~---~~~~~~~~~l~~~G~~v~~g  268 (307)
                        +.++.+... .+|+|+-..-  ..   ..+....+.|+|||++|..-
T Consensus       219 ~~~~~~~~~~~-~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         219 FLSEEWRERIA-NTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             TTSHHHHHHHH-HCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             ccccccccccC-cceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence              233444332 2577774322  22   24566778899999999754

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=93.05  E-value=0.1  Score=42.09  Aligned_cols=100  Identities=17%  Similarity=0.164  Sum_probs=62.1

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCccHHH----HHHcCCceEEeCCChhHHHHhcCCccEEEE
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSIDR----VLAAGAEQAVDYSSKDIELAIKGKFDAVLD  243 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~~~~~~----~~~~g~~~v~~~~~~~~~~~~~~~~dvvid  243 (307)
                      ..++....+||=+|  ++.|..+..+++.. +.+++++..++..+.    +.+.+....+.....++.+....++|+|+-
T Consensus        75 ~~d~~~~~~VLDvG--cG~G~~~~~la~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~rv~~~~~D~~~~~~~~~D~v~~  152 (253)
T d1tw3a2          75 AYDWTNVRHVLDVG--GGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIIL  152 (253)
T ss_dssp             HSCCTTCSEEEEET--CTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSCEEEEEE
T ss_pred             hcCCccCCEEEEeC--CCCCHHHHHHHHhcceeEEEEccCHHHHHHHHHHHHHhhcccchhhccccchhhcccchhheee
Confidence            55677788999998  56899999999887 458887765543322    334443211111111221222257999885


Q ss_pred             CCC-----Ch---hhHHHHHhcccCCcEEEEeccC
Q 021831          244 TIG-----AP---ETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       244 ~~g-----~~---~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ..-     ..   ..+..+.+.|+|||+++.+-..
T Consensus       153 ~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~~  187 (253)
T d1tw3a2         153 SFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD  187 (253)
T ss_dssp             ESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             ccccccCCchhhHHHHHHHHHhcCCCcEEEEEecc
Confidence            432     22   2467788999999999987543

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.03  E-value=0.12  Score=39.78  Aligned_cols=93  Identities=22%  Similarity=0.269  Sum_probs=57.2

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCceE--EeCCChhHHHHhcCCccEEEE
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAEQA--VDYSSKDIELAIKGKFDAVLD  243 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~~v--~~~~~~~~~~~~~~~~dvvid  243 (307)
                      .+++| +||=+|.  +.|..+..+++ +|++|+++.-++. .+.    ....+.+.+  ...+..++.  ..+.||+|+.
T Consensus        28 ~~~~g-rvLDiGc--G~G~~~~~la~-~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~--~~~~fD~I~~  101 (198)
T d2i6ga1          28 VVAPG-RTLDLGC--GNGRNSLYLAA-NGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT--FDGEYDFILS  101 (198)
T ss_dssp             TSCSC-EEEEETC--TTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC--CCCCEEEEEE
T ss_pred             cCCCC-cEEEECC--CCCHHHHHHHH-HhhhhccccCcHHHHHHHHHHhhhccccchhhhheeccccc--ccccccEEEE
Confidence            34555 8999983  48888887776 5899999966554 332    344454422  111111111  1257999986


Q ss_pred             CCC-----C---hhhHHHHHhcccCCcEEEEecc
Q 021831          244 TIG-----A---PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       244 ~~g-----~---~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      ..-     .   ...+..+.++|+|+|+++....
T Consensus       102 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~  135 (198)
T d2i6ga1         102 TVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVAA  135 (198)
T ss_dssp             ESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             eeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            432     1   1356778889999999887653

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.96  E-value=0.084  Score=43.50  Aligned_cols=95  Identities=16%  Similarity=0.181  Sum_probs=58.9

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHH----HcCCc------eEEeCCChhHHHHhc--
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVL----AAGAE------QAVDYSSKDIELAIK--  235 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~----~~g~~------~v~~~~~~~~~~~~~--  235 (307)
                      ..+.+++.+||=+|  .+.|..+..+++. |++|+++.-+++ .+.++    ..+..      .+.+.+-........  
T Consensus        51 ~l~~~~~~~vLD~G--cG~G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (292)
T d1xvaa_          51 LLRQHGCHRVLDVA--CGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAG  127 (292)
T ss_dssp             HHHHTTCCEEEESS--CTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCT
T ss_pred             HhhhcCCCEEEEec--CCCcHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeeccccccccccCCC
Confidence            33445678999998  4578888888875 899999966654 33332    22211      122222222222222  


Q ss_pred             CCccEEEECCCC--------------hhhHHHHHhcccCCcEEEE
Q 021831          236 GKFDAVLDTIGA--------------PETERLGLNFLKRGGHYMT  266 (307)
Q Consensus       236 ~~~dvvid~~g~--------------~~~~~~~~~~l~~~G~~v~  266 (307)
                      ++||.|+.....              ...+..+.+.|+|||.++.
T Consensus       128 ~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         128 DGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             TCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred             CCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence            479999864321              1257889999999999887

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=92.94  E-value=0.064  Score=42.36  Aligned_cols=96  Identities=15%  Similarity=0.074  Sum_probs=59.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHH---cCCEEEEEeCCcc-HHHHH----HcCCceEEeCCChhHHHHhcCCccEEE
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVA---SGCHVSATCGSKS-IDRVL----AAGAEQAVDYSSKDIELAIKGKFDAVL  242 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~---~G~~Vi~~~~~~~-~~~~~----~~g~~~v~~~~~~~~~~~~~~~~dvvi  242 (307)
                      .++++.+||=+|  .+.|..+..+++.   .+++|+++..+.. .+.++    +.+....+.....+..+.....+|+++
T Consensus        36 ~~~~~~~vLDlG--CGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~i~  113 (225)
T d1im8a_          36 FVTADSNVYDLG--CSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVEIKNASMVI  113 (225)
T ss_dssp             HCCTTCEEEEES--CTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTCCCCSEEEEE
T ss_pred             hcCCCCEEEEec--cchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhccccccceeeE
Confidence            368899999998  4578888888875   4779999966554 33333    333322222111222221114577776


Q ss_pred             ECCCC--------hhhHHHHHhcccCCcEEEEec
Q 021831          243 DTIGA--------PETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       243 d~~g~--------~~~~~~~~~~l~~~G~~v~~g  268 (307)
                      -+..-        ...+..+.+.|+|||.++..-
T Consensus       114 ~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~  147 (225)
T d1im8a_         114 LNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE  147 (225)
T ss_dssp             EESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence            65331        135788899999999999863

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=92.84  E-value=0.18  Score=35.41  Aligned_cols=40  Identities=18%  Similarity=0.243  Sum_probs=34.4

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK  209 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~  209 (307)
                      .....++.+|+|.|+ |.+|+-.+..++.+|.+|..+.+.+
T Consensus        16 ~l~~~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          16 ELDYEPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             HCCSCCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             HHhhCCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            456678999999995 9999999999999999998886654

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.82  E-value=0.099  Score=40.26  Aligned_cols=96  Identities=14%  Similarity=0.183  Sum_probs=58.6

Q ss_pred             HHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc----eEEeCCChhHHHHhc-
Q 021831          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE----QAVDYSSKDIELAIK-  235 (307)
Q Consensus       166 l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~----~v~~~~~~~~~~~~~-  235 (307)
                      +.+.....++++||=.|  .+.|..++.+++ .+.+|+++.-+.. ...    ++..+..    .+...+   +.+.+. 
T Consensus        44 Li~~l~~~~~~~VLDiG--cG~G~~~~~la~-~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d---~~~~~~~  117 (194)
T d1dusa_          44 LVENVVVDKDDDILDLG--CGYGVIGIALAD-EVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSD---LYENVKD  117 (194)
T ss_dssp             HHHHCCCCTTCEEEEET--CTTSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECS---TTTTCTT
T ss_pred             HHHhCCcCCCCeEEEEe--ecCChhHHHHHh-hccccceeeeccccchhHHHHHHHhCCccceEEEEEcc---hhhhhcc
Confidence            33466788999999998  456777777665 4679988855443 222    2333332    222222   112222 


Q ss_pred             CCccEEEECCC---Ch----hhHHHHHhcccCCcEEEEe
Q 021831          236 GKFDAVLDTIG---AP----ETERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       236 ~~~dvvid~~g---~~----~~~~~~~~~l~~~G~~v~~  267 (307)
                      +.||+|+-...   +.    ..+..+.+.|+|+|+++.+
T Consensus       118 ~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         118 RKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             SCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence            47999987432   22    2467788899999998764

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=92.63  E-value=0.19  Score=42.14  Aligned_cols=73  Identities=15%  Similarity=0.081  Sum_probs=48.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHH---HHHcCCceEEeCC--C-hhHHHHhcCCccEEEECCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR---VLAAGAEQAVDYS--S-KDIELAIKGKFDAVLDTIG  246 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~---~~~~g~~~v~~~~--~-~~~~~~~~~~~dvvid~~g  246 (307)
                      .-.+|+|+||+|.+|..++..+...|.+|++++|+.+...   +.......++..+  + .+.......+.|.++....
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~   80 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT   80 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeecc
Confidence            4578999999999999999999999999999987644322   2332222333322  2 3334444466787776543

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=92.47  E-value=0.044  Score=42.16  Aligned_cols=91  Identities=15%  Similarity=0.152  Sum_probs=54.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCccHHH-HHH----cCCceEEeCCChhHHHHhcCCccEEEECCCChhh
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSIDR-VLA----AGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET  250 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~~~~-~~~----~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~  250 (307)
                      +|.|+||+|-+|+-.++++..+-- ++..+.+.+.... ..+    +.....  .......+....+.|++|.+++...+
T Consensus         7 kVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~Dvvf~alp~~~s   84 (183)
T d2cvoa1           7 RIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDL--PNLVAVKDADFSNVDAVFCCLPHGTT   84 (183)
T ss_dssp             EEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCC--CCCBCGGGCCGGGCSEEEECCSSSHH
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCcccccccccccccc--ccchhhhhhhhcccceeeeccccchH
Confidence            689999999999999999988754 6665544332111 111    111100  00001111111458999999999845


Q ss_pred             HHHHHhcccCCcEEEEeccC
Q 021831          251 ERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ... ...+...+..+.....
T Consensus        85 ~~~-~~~l~~~~~~v~~~~~  103 (183)
T d2cvoa1          85 QEI-IKGLPQELKIVDLSAD  103 (183)
T ss_dssp             HHH-HHTSCSSCEEEECSST
T ss_pred             HHH-HHHHHhcCcccccchh
Confidence            444 4667777887776654

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.42  E-value=0.22  Score=41.24  Aligned_cols=33  Identities=21%  Similarity=0.246  Sum_probs=30.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~  208 (307)
                      .++||+||+|-+|..++..+...|.+|+++.+.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence            478999999999999999999999999999763

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.42  E-value=0.15  Score=40.59  Aligned_cols=98  Identities=17%  Similarity=0.180  Sum_probs=60.3

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCcc-HHHHHHc----CCceEEeCCChhHHHHhc--CCccE
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKS-IDRVLAA----GAEQAVDYSSKDIELAIK--GKFDA  240 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~~~-~~~~~~~----g~~~v~~~~~~~~~~~~~--~~~dv  240 (307)
                      ...++||++||=+|+  +.|..+..+++... .+|+++.-+.+ .+.+++.    .....+..+.........  ..+|+
T Consensus        69 ~l~ikpG~~VLDlGc--GsG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v~~  146 (230)
T d1g8sa_          69 VMPIKRDSKILYLGA--SAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDV  146 (230)
T ss_dssp             CCCCCTTCEEEEESC--CSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCEEE
T ss_pred             hCCCCCCCEEEEeCE--EcCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCcccccccceeEE
Confidence            557899999999995  45777778887643 49999966544 3444332    222223333222211111  34666


Q ss_pred             EEECCCCh----hhHHHHHhcccCCcEEEEec
Q 021831          241 VLDTIGAP----ETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       241 vid~~g~~----~~~~~~~~~l~~~G~~v~~g  268 (307)
                      ++......    ..+..+...|+|||+++.+-
T Consensus       147 i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~~  178 (230)
T d1g8sa_         147 IYEDVAQPNQAEILIKNAKWFLKKGGYGMIAI  178 (230)
T ss_dssp             EEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             eeccccchHHHHHHHHHHHHhcccCceEEEEe
Confidence            77665432    24677888999999988764

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=92.40  E-value=0.23  Score=38.18  Aligned_cols=89  Identities=9%  Similarity=0.019  Sum_probs=57.9

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChh----
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE----  249 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~----  249 (307)
                      |.++.|+| .|.+|...+++++..|++|+...+... .......+..   ...  ++.+.+ ...|+|..+++...    
T Consensus        47 g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~---~~~--~l~~ll-~~sD~v~l~~plt~~T~~  119 (191)
T d1gdha1          47 NKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQAT---FHD--SLDSLL-SVSQFFSLNAPSTPETRY  119 (191)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCE---ECS--SHHHHH-HHCSEEEECCCCCTTTTT
T ss_pred             ccceEEee-cccchHHHHHHHHhhccccccccccccccchhhccccc---ccC--CHHHHH-hhCCeEEecCCCCchHhh
Confidence            79999999 599999999999999999998865433 2222222221   111  222222 23688877765421    


Q ss_pred             -hHHHHHhcccCCcEEEEeccC
Q 021831          250 -TERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       250 -~~~~~~~~l~~~G~~v~~g~~  270 (307)
                       .-...+..|+++..+|-++-.
T Consensus       120 li~~~~l~~mk~~a~lIN~sRG  141 (191)
T d1gdha1         120 FFNKATIKSLPQGAIVVNTARG  141 (191)
T ss_dssp             CBSHHHHTTSCTTEEEEECSCG
T ss_pred             eecHHHhhCcCCccEEEecCCc
Confidence             124667788888888887754

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.39  E-value=0.13  Score=43.90  Aligned_cols=32  Identities=28%  Similarity=0.501  Sum_probs=29.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATC  206 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~  206 (307)
                      |.+|||+||+|-+|..++..+...|.+|+++.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            68999999999999999999999999999874

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=92.31  E-value=0.32  Score=32.84  Aligned_cols=72  Identities=18%  Similarity=0.276  Sum_probs=50.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHH-HHHHHHcCCEEEEEeCCcc--HHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCC
Q 021831          171 RMSEGQRLLVLGGGGAVGFAA-VQFSVASGCHVSATCGSKS--IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGA  247 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~-~~~a~~~G~~Vi~~~~~~~--~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~  247 (307)
                      .++..+++.++|- |++|+.+ +++++..|..|.+......  .+.+++.|......+....    + .+.|+|+-+.+-
T Consensus         4 ~~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~~~----i-~~~d~vV~S~AI   77 (96)
T d1p3da1           4 EMRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAEEH----I-EGASVVVVSSAI   77 (96)
T ss_dssp             CCTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCGGG----G-TTCSEEEECTTS
T ss_pred             cchhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCcccc----C-CCCCEEEECCCc
Confidence            4566789999995 8889776 8999999999999966443  4567788876333333222    1 358988877664


Q ss_pred             h
Q 021831          248 P  248 (307)
Q Consensus       248 ~  248 (307)
                      +
T Consensus        78 ~   78 (96)
T d1p3da1          78 K   78 (96)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.15  E-value=0.17  Score=42.44  Aligned_cols=97  Identities=26%  Similarity=0.246  Sum_probs=59.7

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCcc-HHH----HHHcCCc---eEEeCCChhHHHHhc---CCc
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDR----VLAAGAE---QAVDYSSKDIELAIK---GKF  238 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~-~~~----~~~~g~~---~v~~~~~~~~~~~~~---~~~  238 (307)
                      .+++|++||=.++  ++|..++.+++. |+ +|+++..+++ .+.    ++..|..   +++..+..++.....   ..|
T Consensus       142 ~~~~g~~VLDl~~--g~G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~f  218 (324)
T d2as0a2         142 WVQPGDRVLDVFT--YTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKF  218 (324)
T ss_dssp             GCCTTCEEEETTC--TTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred             hcCCCCeeecccC--cccchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHHhccCCC
Confidence            4678999988773  455555655554 77 8988866544 232    4556653   333333334433332   479


Q ss_pred             cEEEECCCC---------------hhhHHHHHhcccCCcEEEEeccC
Q 021831          239 DAVLDTIGA---------------PETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       239 dvvid~~g~---------------~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      |+|+--.+.               ...+..++++|+|||.++++.-.
T Consensus       219 D~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s  265 (324)
T d2as0a2         219 DIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS  265 (324)
T ss_dssp             EEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred             CchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence            988863331               11456778899999999987643

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=92.10  E-value=0.27  Score=37.00  Aligned_cols=92  Identities=13%  Similarity=0.160  Sum_probs=63.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-CccH---HHHHHcCC-------c---------------eEEeCCCh--
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSI---DRVLAAGA-------E---------------QAVDYSSK--  228 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~~~---~~~~~~g~-------~---------------~v~~~~~~--  228 (307)
                      +|.|+| -|.+|+++...+...+.+++++.+ ..+.   ..+.+..-       +               .+.+..++  
T Consensus         2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~   80 (169)
T d1dssg1           2 KIGING-FGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN   80 (169)
T ss_dssp             CEEEEC-CSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             eEEEEC-CcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHH
Confidence            588999 799999999999888888888854 3332   33333321       0               11111111  


Q ss_pred             -hHHHHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          229 -DIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       229 -~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                       +|.+   -++|+||||+|-......+...+..|-+-|.+..|..
T Consensus        81 i~W~~---~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~~  122 (169)
T d1dssg1          81 IPWSK---AGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSA  122 (169)
T ss_dssp             CCHHH---HTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCS
T ss_pred             CCccc---cCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCcc
Confidence             2322   2699999999987778888899998888888888765

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=91.97  E-value=0.2  Score=41.88  Aligned_cols=70  Identities=20%  Similarity=0.227  Sum_probs=45.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC---cc--HHHHHHc---CCceE-EeCCCh-hHHHHhc-CCccEEEECC
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGS---KS--IDRVLAA---GAEQA-VDYSSK-DIELAIK-GKFDAVLDTI  245 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~---~~--~~~~~~~---g~~~v-~~~~~~-~~~~~~~-~~~dvvid~~  245 (307)
                      +|||+||+|-+|...+..+...|.+|+++.+.   .+  ....+..   ....+ .|..+. .+.+.+. .++|+||.++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHlA   81 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFA   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEECC
Confidence            69999999999999999999999999988542   11  1222222   22221 233333 3444444 4799999987


Q ss_pred             C
Q 021831          246 G  246 (307)
Q Consensus       246 g  246 (307)
                      +
T Consensus        82 a   82 (338)
T d1udca_          82 G   82 (338)
T ss_dssp             S
T ss_pred             C
Confidence            5

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.88  E-value=0.12  Score=43.05  Aligned_cols=97  Identities=14%  Similarity=0.180  Sum_probs=54.5

Q ss_pred             HHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCccHHH----HHHcCCc---eEEeCCChhHHHHhcC
Q 021831          165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSIDR----VLAAGAE---QAVDYSSKDIELAIKG  236 (307)
Q Consensus       165 ~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~~~~----~~~~g~~---~v~~~~~~~~~~~~~~  236 (307)
                      ++.......+|++||-+|. | .|.++..+|+ .|+ +|+++..++....    .++.+..   .++..+..++.. ...
T Consensus        26 ai~~~~~~~~~~~VLDiGc-G-~G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~-~~~  101 (311)
T d2fyta1          26 FIYQNPHIFKDKVVLDVGC-G-TGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHL-PVE  101 (311)
T ss_dssp             HHHHCGGGTTTCEEEEETC-T-TSHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCC-SCS
T ss_pred             HHHhccccCCcCEEEEECC-C-CCHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcC-ccc
Confidence            3444456678999999994 3 6676666665 487 8999866654322    2333432   333332222110 114


Q ss_pred             CccEEEECCC-----Chh---h-HHHHHhcccCCcEEE
Q 021831          237 KFDAVLDTIG-----APE---T-ERLGLNFLKRGGHYM  265 (307)
Q Consensus       237 ~~dvvid~~g-----~~~---~-~~~~~~~l~~~G~~v  265 (307)
                      .+|+|+.-.-     +..   . ....-+.|+|+|+++
T Consensus       102 ~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1         102 KVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             CEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             cceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence            7999986321     111   2 223345799999886

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=91.81  E-value=0.37  Score=38.06  Aligned_cols=98  Identities=13%  Similarity=0.184  Sum_probs=62.9

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCcc-HH----HHHHcCCceE---EeCCChhHHHHh----
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKS-ID----RVLAAGAEQA---VDYSSKDIELAI----  234 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~~-~~----~~~~~g~~~v---~~~~~~~~~~~~----  234 (307)
                      ..+....++||-+|  +.+|..++.+|+.+  +.+++++...++ ..    ..++.|..+.   ......+..+.+    
T Consensus        54 L~~~~~~k~iLEiG--T~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a~~~L~~l~~~~  131 (227)
T d1susa1          54 LLKLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDE  131 (227)
T ss_dssp             HHHHHTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCG
T ss_pred             HHHhcCCCcEEEec--chhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHHHHHHHHHHhcc
Confidence            44445668999999  67899999999876  458888855443 22    2445665432   333333333333    


Q ss_pred             --cCCccEEE-ECCCC--hhhHHHHHhcccCCcEEEEec
Q 021831          235 --KGKFDAVL-DTIGA--PETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       235 --~~~~dvvi-d~~g~--~~~~~~~~~~l~~~G~~v~~g  268 (307)
                        .+.||+|| |+--.  ...+..++++|++||.++.=-
T Consensus       132 ~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~DN  170 (227)
T d1susa1         132 KNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN  170 (227)
T ss_dssp             GGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEET
T ss_pred             ccCCceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEcc
Confidence              14799875 44332  246788999999999987743

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=91.68  E-value=0.22  Score=36.79  Aligned_cols=87  Identities=17%  Similarity=0.107  Sum_probs=53.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHH-HHHcCCc-----eEEeCCChhHHHHhcCCccEEEECCCChh-
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR-VLAAGAE-----QAVDYSSKDIELAIKGKFDAVLDTIGAPE-  249 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~-~~~~g~~-----~v~~~~~~~~~~~~~~~~dvvid~~g~~~-  249 (307)
                      +|+|+|+ |.+|.+.+..+...|..|..+.+.++... ....+.+     ..+.....   +.+ +.+|++|-++.... 
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~D~iii~vka~~~   76 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDP---DFL-ATSDLLLVTLKAWQV   76 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCH---HHH-HTCSEEEECSCGGGH
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccchh---hhh-cccceEEEeecccch
Confidence            7999996 99999988888888999999877654211 1111111     11111111   111 35899999998752 


Q ss_pred             --hHHHHHhcccCCcEEEEec
Q 021831          250 --TERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       250 --~~~~~~~~l~~~G~~v~~g  268 (307)
                        .+..+...+.++..++.+.
T Consensus        77 ~~~~~~l~~~~~~~~~Iv~~q   97 (167)
T d1ks9a2          77 SDAVKSLASTLPVTTPILLIH   97 (167)
T ss_dssp             HHHHHHHHTTSCTTSCEEEEC
T ss_pred             HHHHHhhccccCcccEEeecc
Confidence              2334444556667677664

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=91.67  E-value=0.31  Score=34.43  Aligned_cols=43  Identities=23%  Similarity=0.258  Sum_probs=34.4

Q ss_pred             HHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 021831          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK  209 (307)
Q Consensus       166 l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~  209 (307)
                      ++....-..+.+|+|.|| |.+|+-+++.+..+|.+|..+-+.+
T Consensus        21 i~~~~~~~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          21 LKQKTVDPEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             HHHHHTCTTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             HHHHhhccCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            333445556789999995 9999999999999999998885544

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=91.59  E-value=0.069  Score=43.51  Aligned_cols=96  Identities=14%  Similarity=0.102  Sum_probs=59.2

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHH----HHHcCCc---eEEeCCChhHHHHhcCCccEE
Q 021831          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDR----VLAAGAE---QAVDYSSKDIELAIKGKFDAV  241 (307)
Q Consensus       170 ~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~----~~~~g~~---~v~~~~~~~~~~~~~~~~dvv  241 (307)
                      ..+++|++||-.++  ++|..++.+|+.-+++|+++..+. ..+.    ++..+.+   .++..+..++..  .+.||.|
T Consensus       103 ~~~~~g~~VlD~~a--G~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~~~--~~~~D~I  178 (260)
T d2frna1         103 KVAKPDELVVDMFA--GIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--ENIADRI  178 (260)
T ss_dssp             HHCCTTCEEEETTC--TTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--CSCEEEE
T ss_pred             hhcCCccEEEECcc--eEcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHhcc--CCCCCEE
Confidence            35689999999884  467777777776446999995443 3333    3444543   334333322211  1468966


Q ss_pred             EEC-C-CChhhHHHHHhcccCCcEEEEecc
Q 021831          242 LDT-I-GAPETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       242 id~-~-g~~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      +-. - .....+..++..+++||.+.....
T Consensus       179 i~~~p~~~~~~l~~a~~~l~~gG~lh~~~~  208 (260)
T d2frna1         179 LMGYVVRTHEFIPKALSIAKDGAIIHYHNT  208 (260)
T ss_dssp             EECCCSSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred             EECCCCchHHHHHHHHhhcCCCCEEEEEec
Confidence            543 2 334577889999999998765443

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=91.47  E-value=0.41  Score=36.92  Aligned_cols=88  Identities=19%  Similarity=0.197  Sum_probs=57.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhh---
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET---  250 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~---  250 (307)
                      .|.+|.|+| .|.+|..++++++.+|++|++..+.......  ...    ...  ++.+.+ ...|++.-++.....   
T Consensus        44 ~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~--~~~----~~~--~l~~l~-~~~D~v~~~~plt~~T~~  113 (199)
T d1dxya1          44 GQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGDH--PDF----DYV--SLEDLF-KQSDVIDLHVPGIEQNTH  113 (199)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSCC--TTC----EEC--CHHHHH-HHCSEEEECCCCCGGGTT
T ss_pred             cceeeeeee-cccccccccccccccceeeeccCCccchhhh--cch----hHH--HHHHHH-Hhcccceeeecccccccc
Confidence            468999999 6999999999999999999998654321100  011    111  222222 226888777654321   


Q ss_pred             --HHHHHhcccCCcEEEEeccCc
Q 021831          251 --ERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       251 --~~~~~~~l~~~G~~v~~g~~~  271 (307)
                        -...+..|+++..+|-++-..
T Consensus       114 li~~~~l~~mk~~a~lIN~aRG~  136 (199)
T d1dxya1         114 IINEAAFNLMKPGAIVINTARPN  136 (199)
T ss_dssp             SBCHHHHHHSCTTEEEEECSCTT
T ss_pred             cccHHHhhccCCceEEEecccHh
Confidence              245677888888888888543

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.42  E-value=0.25  Score=38.89  Aligned_cols=98  Identities=21%  Similarity=0.246  Sum_probs=61.7

Q ss_pred             HHcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCcc-H----HHHHHcCCceEEe---CCChhHHHHh-c-
Q 021831          168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKS-I----DRVLAAGAEQAVD---YSSKDIELAI-K-  235 (307)
Q Consensus       168 ~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~~-~----~~~~~~g~~~v~~---~~~~~~~~~~-~-  235 (307)
                      ...+....++||-+|  +..|..++.+|+.+  +.+++++...++ .    ...+..|....+.   .+..+..+.. . 
T Consensus        53 ~L~~~~~~k~vLEiG--t~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda~e~l~~~~~~  130 (219)
T d2avda1          53 NLARLIQAKKALDLG--TFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAA  130 (219)
T ss_dssp             HHHHHTTCCEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHT
T ss_pred             HHHHccCCCeEEEEe--chhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEeehhhcchhhhhh
Confidence            345556678999999  56788888888865  458988855443 2    2244556543332   2222222222 1 


Q ss_pred             ---CCccEEEECCCC---hhhHHHHHhcccCCcEEEEe
Q 021831          236 ---GKFDAVLDTIGA---PETERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       236 ---~~~dvvid~~g~---~~~~~~~~~~l~~~G~~v~~  267 (307)
                         +.||+||--..-   ...+..+++.|++||.++.=
T Consensus       131 ~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~D  168 (219)
T d2avda1         131 GEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVL  168 (219)
T ss_dssp             TCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cccCCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEe
Confidence               469988654332   23567899999999999873

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=91.37  E-value=0.33  Score=36.34  Aligned_cols=92  Identities=12%  Similarity=0.126  Sum_probs=61.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCccH---HHHHHcC-------Cc---------------eEEeCCCh--
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI---DRVLAAG-------AE---------------QAVDYSSK--  228 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~~~~---~~~~~~g-------~~---------------~v~~~~~~--  228 (307)
                      +|.|+| -|.+|+++...+.... .+++++.+....   ..+.+..       .+               .+++..++  
T Consensus         3 kigING-FGRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p~~   81 (166)
T d1gado1           3 KVGING-FGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPAN   81 (166)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             EEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCChHH
Confidence            578999 7999999999888765 588888554432   2233322       11               11111111  


Q ss_pred             -hHHHHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          229 -DIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       229 -~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                       +|.+   -++|+||||+|--.....+...+..|-+-|.+..|..
T Consensus        82 i~W~~---~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~~  123 (166)
T d1gado1          82 LKWDE---VGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSK  123 (166)
T ss_dssp             GCHHH---HTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCS
T ss_pred             CCccc---cCCCEEEEccccccCHHHHHHHhcCCCceEEeecccc
Confidence             2322   2699999999987777888888988887788888765

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.36  E-value=0.098  Score=39.79  Aligned_cols=34  Identities=15%  Similarity=0.343  Sum_probs=28.3

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSK  209 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~-Vi~~~~~~  209 (307)
                      +++|+|+|| |+.|+.++..++++|++ |..+-+.+
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            578999996 99999999999999994 76664443

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=91.36  E-value=0.11  Score=33.89  Aligned_cols=33  Identities=24%  Similarity=0.217  Sum_probs=28.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK  209 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~  209 (307)
                      .+|.|+|+ |.+|.+.++.++.+|.++.......
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~   34 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDA   34 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTS
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCC
Confidence            47899995 9999999999999999999886544

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=91.35  E-value=0.19  Score=42.46  Aligned_cols=33  Identities=21%  Similarity=0.248  Sum_probs=29.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~  208 (307)
                      ..|||+||+|-+|..++..+...|.+|+++.+.
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~   34 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRR   34 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence            468899999999999999999999999998763

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=91.34  E-value=0.29  Score=39.12  Aligned_cols=35  Identities=26%  Similarity=0.300  Sum_probs=31.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~  208 (307)
                      -.|.+|+|.| .|.+|..+++++..+|++|+++.+.
T Consensus        29 l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          29 IEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence            4789999999 6999999999999999999988653

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=91.32  E-value=0.84  Score=33.06  Aligned_cols=91  Identities=15%  Similarity=0.148  Sum_probs=56.5

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HHHHHcCCceEEeCCChh-HHHHhc------CCccEEEECCCC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKD-IELAIK------GKFDAVLDTIGA  247 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~~~~g~~~v~~~~~~~-~~~~~~------~~~dvvid~~g~  247 (307)
                      .+|.|+|+.|.+|...+..++..|..|.+..+.... ......+++.++...... ..+.+.      ..=.+++|++..
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD~~Sv   89 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILANADVVIVSVPINLTLETIERLKPYLTENMLLADLTSV   89 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECCSC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhhhccccccccchhhheeeeecccccccCCceEEEeccc
Confidence            589999977999999999999999999888665443 334445666666554422 222111      222588898876


Q ss_pred             hhhHHHHHhcccCCcEEEEe
Q 021831          248 PETERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       248 ~~~~~~~~~~l~~~G~~v~~  267 (307)
                      .......+.... .++++..
T Consensus        90 k~~~~~~~~~~~-~~~~v~~  108 (152)
T d2pv7a2          90 KREPLAKMLEVH-TGAVLGL  108 (152)
T ss_dssp             CHHHHHHHHHHC-SSEEEEE
T ss_pred             CHHHHHHHHHHc-cCCEEEe
Confidence            544333333222 2355543

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=91.06  E-value=0.27  Score=34.49  Aligned_cols=41  Identities=10%  Similarity=0.180  Sum_probs=34.0

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~  210 (307)
                      ...++..++|+|.|| |.+|+-++..+..+|.+|..+.+.++
T Consensus        16 ~~~l~~p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          16 FFNIKESKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             HTTCCCCSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             HhccCCCCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            335556789999996 99999999999999999999876553

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=90.98  E-value=0.15  Score=38.82  Aligned_cols=91  Identities=19%  Similarity=0.254  Sum_probs=57.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEe-CC-cc-----HHHH-HHc-C--CceEEeCCChhHHHHhcCCccEEEEC
Q 021831          177 RLLVLGGGGAVGFAAVQFSVAS-GCHVSATC-GS-KS-----IDRV-LAA-G--AEQAVDYSSKDIELAIKGKFDAVLDT  244 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~-~~-~~-----~~~~-~~~-g--~~~v~~~~~~~~~~~~~~~~dvvid~  244 (307)
                      +|.|.||+|-+|+-.++++..+ .+++..+. ++ ++     .... ..+ +  ........+.   .......|++|-+
T Consensus         3 kVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~dvvf~a   79 (179)
T d2g17a1           3 NTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDV---RDFSADVDVVFLA   79 (179)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCG---GGTCTTCCEEEEC
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchhh---hhhhcccceeecc
Confidence            6899999999999999999988 55665552 22 11     1111 111 1  1111111111   1111468999999


Q ss_pred             CCChhhHHHHHhcccCCcEEEEeccC
Q 021831          245 IGAPETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       245 ~g~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      .+...+.......+..+-+++..+..
T Consensus        80 lp~~~s~~~~~~~~~~~~~vIDlSad  105 (179)
T d2g17a1          80 TAHEVSHDLAPQFLQAGCVVFDLSGA  105 (179)
T ss_dssp             SCHHHHHHHHHHHHHTTCEEEECSST
T ss_pred             ccchhHHHHhhhhhhcCceeeccccc
Confidence            99986777777777888888888864

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=90.80  E-value=0.28  Score=37.08  Aligned_cols=92  Identities=14%  Similarity=0.138  Sum_probs=58.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc----CCEEEEEeCCccHH---HHHHcCC-------c---------------eEEeCCC
Q 021831          177 RLLVLGGGGAVGFAAVQFSVAS----GCHVSATCGSKSID---RVLAAGA-------E---------------QAVDYSS  227 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~----G~~Vi~~~~~~~~~---~~~~~g~-------~---------------~v~~~~~  227 (307)
                      +|.|+| -|.+|.++...+...    ..+|+++-+....+   .+.+..-       .               .++...+
T Consensus         3 kigING-fGRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~   81 (173)
T d1obfo1           3 RVAING-YGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRN   81 (173)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSC
T ss_pred             EEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEecCC
Confidence            588999 799999999877643    23677775443332   2333221       1               1111111


Q ss_pred             hhHHHHhc---CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          228 KDIELAIK---GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       228 ~~~~~~~~---~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      +   +.+.   -++|+|+||+|.-.....+...|..|-+-|.+..|..
T Consensus        82 p---~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~~  126 (173)
T d1obfo1          82 P---AQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGG  126 (173)
T ss_dssp             G---GGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCC
T ss_pred             H---HHCcccccccceEEEecccccCHHHHHHHhccCCcceEEecCCC
Confidence            1   1111   3799999999986677788888988888888888765

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=90.72  E-value=0.2  Score=40.67  Aligned_cols=93  Identities=17%  Similarity=0.109  Sum_probs=59.9

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCcc-HHHHHHcCCc-eEEeCCChhHHHHhcCCccEEEECCCCh
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKS-IDRVLAAGAE-QAVDYSSKDIELAIKGKFDAVLDTIGAP  248 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~~~-~~~~~~~g~~-~v~~~~~~~~~~~~~~~~dvvid~~g~~  248 (307)
                      ..++.+||=+|  .+.|..+..+++.. +.+++++.-++. .+.+++.... .....+..++. ...+.||+|+....-.
T Consensus        82 ~~~~~~iLDiG--cG~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~l~-~~~~sfD~v~~~~~~~  158 (268)
T d1p91a_          82 DDKATAVLDIG--CGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLP-FSDTSMDAIIRIYAPC  158 (268)
T ss_dssp             CTTCCEEEEET--CTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCS-BCTTCEEEEEEESCCC
T ss_pred             CCCCCEEEEeC--CCCcHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehhhcc-CCCCCEEEEeecCCHH
Confidence            35678899888  45677777888765 569999865544 4445443332 22222222210 0014699999765444


Q ss_pred             hhHHHHHhcccCCcEEEEec
Q 021831          249 ETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       249 ~~~~~~~~~l~~~G~~v~~g  268 (307)
                       .+..+.+.|+|||.++...
T Consensus       159 -~~~e~~rvLkpgG~l~~~~  177 (268)
T d1p91a_         159 -KAEELARVVKPGGWVITAT  177 (268)
T ss_dssp             -CHHHHHHHEEEEEEEEEEE
T ss_pred             -HHHHHHHHhCCCcEEEEEe
Confidence             6788999999999998865

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=90.66  E-value=0.21  Score=41.66  Aligned_cols=71  Identities=23%  Similarity=0.157  Sum_probs=44.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCcc-HHHHHHcCCceEEeC--CC-hhHHHHhcCCccEEEECCCC
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKS-IDRVLAAGAEQAVDY--SS-KDIELAIKGKFDAVLDTIGA  247 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~~~-~~~~~~~g~~~v~~~--~~-~~~~~~~~~~~dvvid~~g~  247 (307)
                      +|||+||+|-+|..+++.+...| .+|+++..... ...+.+...-..+..  ++ .++.+....++|+||.+++-
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~   77 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI   77 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCcccccccc
Confidence            69999999999999998888888 58988855332 222222111122322  22 24444333569999998774

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.50  E-value=0.16  Score=41.80  Aligned_cols=71  Identities=20%  Similarity=0.224  Sum_probs=46.2

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc---cHHHHHHcCCc---eEE--eCCCh-hHHHHhc-CCccEEEECC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK---SIDRVLAAGAE---QAV--DYSSK-DIELAIK-GKFDAVLDTI  245 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~---~~~~~~~~g~~---~v~--~~~~~-~~~~~~~-~~~dvvid~~  245 (307)
                      .+|||+||+|-+|..++..+...|.+|+++.+..   ....++.+..+   .++  |..+. .+..... ...++++.+.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence            4799999999999999999988899999987543   23445555532   222  33332 2222222 3566777765


Q ss_pred             C
Q 021831          246 G  246 (307)
Q Consensus       246 g  246 (307)
                      .
T Consensus        81 ~   81 (321)
T d1rpna_          81 A   81 (321)
T ss_dssp             S
T ss_pred             c
Confidence            5

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=90.46  E-value=0.59  Score=35.21  Aligned_cols=76  Identities=17%  Similarity=0.148  Sum_probs=48.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCc------------eEEeCCChhHHHHhcCCccEEEEC
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE------------QAVDYSSKDIELAIKGKFDAVLDT  244 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~------------~v~~~~~~~~~~~~~~~~dvvid~  244 (307)
                      +|.|+|+ |.+|.+.+..+...|-+|....+..+.+..+.+...            ..+.. ..+..+.+ ...|+||.+
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~-~~~~~~~~-~~ad~Ii~a   78 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFW-PEQLEKCL-ENAEVVLLG   78 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEEC-GGGHHHHH-TTCSEEEEC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccc-cccHHHHH-hccchhhcc
Confidence            6889995 999999998888888888887765444333222110            01111 13344433 468999999


Q ss_pred             CCChhhHHHHHh
Q 021831          245 IGAPETERLGLN  256 (307)
Q Consensus       245 ~g~~~~~~~~~~  256 (307)
                      +... .+...++
T Consensus        79 vps~-~~~~~~~   89 (180)
T d1txga2          79 VSTD-GVLPVMS   89 (180)
T ss_dssp             SCGG-GHHHHHH
T ss_pred             cchh-hhHHHHH
Confidence            9986 4444444

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=90.23  E-value=1.4  Score=33.05  Aligned_cols=89  Identities=11%  Similarity=0.153  Sum_probs=54.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCccHHH-HH----HcCCceEEeCCChhHHHHhcCCccEEEECCCChhh
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSIDR-VL----AAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET  250 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~~~~-~~----~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~  250 (307)
                      +|.|.||+|-+|+-.++++..+-- ++..+.+.+.... +.    .+-.+..+...+.+  + +....|++|-+++...+
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~~--~-~~~~~dvvf~a~p~~~s   79 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPE--K-VSKNCDVLFTALPAGAS   79 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHH--H-HHHHCSEEEECCSTTHH
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccccccCHh--H-hccccceEEEccccHHH
Confidence            689999999999999999987754 7766644332211 21    11122222222221  1 11248999999999855


Q ss_pred             HHHHHhcccCCcEEEEeccC
Q 021831          251 ERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       251 ~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ...+..  ..+-++|+.+..
T Consensus        80 ~~~~~~--~~~~~VIDlSad   97 (176)
T d1vkna1          80 YDLVRE--LKGVKIIDLGAD   97 (176)
T ss_dssp             HHHHTT--CCSCEEEESSST
T ss_pred             HHHHHh--hccceEEecCcc
Confidence            544433  356788888865

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=90.05  E-value=1.7  Score=31.36  Aligned_cols=95  Identities=8%  Similarity=0.068  Sum_probs=59.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH--HHHH---HcCCceEEeCC--ChhHHHHhc-CCccEEEECCC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVL---AAGAEQAVDYS--SKDIELAIK-GKFDAVLDTIG  246 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~--~~~~---~~g~~~v~~~~--~~~~~~~~~-~~~dvvid~~g  246 (307)
                      -++++|.|. |.+|..+++.+...|..++++....+.  ...+   ..+.. ++..+  +++..+... ..+|.++-+++
T Consensus         3 knHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~-vi~Gd~~d~~~L~~a~i~~a~~vi~~~~   80 (153)
T d1id1a_           3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNAD-VIPGDSNDSSVLKKAGIDRCRAILALSD   80 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCE-EEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcE-EEEccCcchHHHHHhccccCCEEEEccc
Confidence            367999995 999999999999999988887554322  2222   23443 44333  334333333 57999999998


Q ss_pred             Chhh---HHHHHhcccCCcEEEEeccCc
Q 021831          247 APET---ERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       247 ~~~~---~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      +...   .....+.+.+.-+++..-...
T Consensus        81 ~d~~n~~~~~~~r~~~~~~~iia~~~~~  108 (153)
T d1id1a_          81 NDADNAFVVLSAKDMSSDVKTVLAVSDS  108 (153)
T ss_dssp             CHHHHHHHHHHHHHHTSSSCEEEECSSG
T ss_pred             cHHHHHHHHHHHHHhCCCCceEEEEcCH
Confidence            7532   222334455666666655444

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=90.02  E-value=0.94  Score=33.24  Aligned_cols=42  Identities=24%  Similarity=0.329  Sum_probs=31.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCC
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGA  219 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~  219 (307)
                      +|-|+| .|.+|...+.-+...|.+|++..++.+ .+.+.+.+.
T Consensus         2 kIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~   44 (161)
T d1vpda2           2 KVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGA   44 (161)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC
T ss_pred             EEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhh
Confidence            578899 699999998888888999988866543 344555554

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=89.98  E-value=0.69  Score=38.38  Aligned_cols=96  Identities=21%  Similarity=0.207  Sum_probs=57.6

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH----HHHcCCc--eEEeCCChhHHHHhc---CCccEE
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR----VLAAGAE--QAVDYSSKDIELAIK---GKFDAV  241 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~----~~~~g~~--~v~~~~~~~~~~~~~---~~~dvv  241 (307)
                      ..+|++||=.++  ++|..++.+++ .+++|+++..+++ .+.    ++..|.+  .++..+..++.+...   +.||+|
T Consensus       143 ~~~g~rVLDl~~--gtG~~s~~~a~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~~~~~~fD~V  219 (318)
T d1wxxa2         143 RFRGERALDVFS--YAGGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLV  219 (318)
T ss_dssp             GCCEEEEEEETC--TTTHHHHHHHH-HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred             HhCCCeeeccCC--CCcHHHHHHHh-cCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhhHhhhcCCCEE
Confidence            346899987763  33555556664 3558988866544 332    4556654  334444445444432   479988


Q ss_pred             EECCC-----C----------hhhHHHHHhcccCCcEEEEeccC
Q 021831          242 LDTIG-----A----------PETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       242 id~~g-----~----------~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      +---+     .          ...+..++++|+|||.++.+.-.
T Consensus       220 i~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs  263 (318)
T d1wxxa2         220 VLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS  263 (318)
T ss_dssp             EECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             EEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            75322     1          11345778899999999987653

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=89.95  E-value=0.6  Score=34.99  Aligned_cols=92  Identities=13%  Similarity=0.120  Sum_probs=60.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc---CCEEEEEeCCccH---HHHHHcC----C---c---------------eEEeCCCh
Q 021831          177 RLLVLGGGGAVGFAAVQFSVAS---GCHVSATCGSKSI---DRVLAAG----A---E---------------QAVDYSSK  228 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~---G~~Vi~~~~~~~~---~~~~~~g----~---~---------------~v~~~~~~  228 (307)
                      +|.|+| -|.+|..+...+...   +.+|+++-+....   ..+.+..    .   +               .+++..++
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p   80 (169)
T d1hdgo1           2 RVAING-FGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP   80 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred             EEEEEC-CChHHHHHHHHHHhccCCCEEEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCCh
Confidence            688999 799999999887643   3688888443333   2233322    1   0               11111111


Q ss_pred             ---hHHHHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          229 ---DIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       229 ---~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                         +|.+   -++|+||||+|--.....+...+..|-+-|.+..|..
T Consensus        81 ~~i~W~~---~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP~k  124 (169)
T d1hdgo1          81 SKLPWKD---LGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAK  124 (169)
T ss_dssp             GGSCHHH---HTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB
T ss_pred             hhCCccc---cCCCEEEEecceeccccchhhhccCCCceEEEecccC
Confidence               2333   2699999999987677888888988877777787765

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.94  E-value=0.32  Score=33.82  Aligned_cols=36  Identities=25%  Similarity=0.369  Sum_probs=31.2

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~  210 (307)
                      ..++++|+|| |.+|+-+++.+..+|.+|..+.+.++
T Consensus        21 ~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          21 VPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            3589999996 99999999999999999998876654

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=89.82  E-value=0.33  Score=37.12  Aligned_cols=89  Identities=15%  Similarity=0.060  Sum_probs=56.1

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChh---
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE---  249 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~---  249 (307)
                      .|.++.|.| .|.+|...++.++.+|++|+...+... ....+..+....     .++.+.+ ...|+|+-++....   
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~-----~~l~~~l-~~sD~v~~~~plt~~T~  115 (188)
T d2naca1          43 EAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWH-----ATREDMY-PVCDVVTLNCPLHPETE  115 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEEC-----SSHHHHG-GGCSEEEECSCCCTTTT
T ss_pred             cccceeecc-ccccchhhhhhhhccCceEEEEeecccccccccccccccc-----CCHHHHH-Hhccchhhcccccccch
Confidence            578999999 599999999999999999999876543 333333332211     1222222 33677766555321   


Q ss_pred             --hHHHHHhcccCCcEEEEecc
Q 021831          250 --TERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       250 --~~~~~~~~l~~~G~~v~~g~  269 (307)
                        .-...+..|+++..+|-++-
T Consensus       116 ~li~~~~l~~mk~ga~lIN~aR  137 (188)
T d2naca1         116 HMINDETLKLFKRGAYIVNTAR  137 (188)
T ss_dssp             TCBSHHHHTTSCTTEEEEECSC
T ss_pred             hhhHHHHHHhCCCCCEEEecCc
Confidence              12455666777777776664

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=89.78  E-value=0.35  Score=38.96  Aligned_cols=34  Identities=21%  Similarity=0.298  Sum_probs=30.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG  207 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~  207 (307)
                      -.|.+|+|.| .|.+|..+++++..+|++|+++.+
T Consensus        34 l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          34 LVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             STTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence            3689999999 699999999999999999998864

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=89.73  E-value=0.23  Score=39.95  Aligned_cols=99  Identities=19%  Similarity=0.156  Sum_probs=61.1

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCccHH----HHHHcCCceEEeCCChhHHHHhcCCccEEEE
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSID----RVLAAGAEQAVDYSSKDIELAIKGKFDAVLD  243 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~~~~~----~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid  243 (307)
                      ..++....+||=+|  ++.|..+..+++.+ +.++++...++...    .+.+.+....+.....++.+....++|+++-
T Consensus        76 ~~d~~~~~~vlDvG--~G~G~~~~~l~~~~P~~~~~~~Dlp~~~~~a~~~~~~~~~~~ri~~~~~d~~~~~p~~~D~v~~  153 (256)
T d1qzza2          76 AYDWSAVRHVLDVG--GGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLL  153 (256)
T ss_dssp             TSCCTTCCEEEEET--CTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCCEEEEEE
T ss_pred             cCCCccCCEEEEEC--CCCCHHHHHHHHhhcCcEEEEecChHHHHHHHHHHhhcCCcceeeeeeeeccccccccchhhhc
Confidence            44567778999998  56789999999987 56888876544322    2334443221111111222222246898875


Q ss_pred             CCC-----Ch---hhHHHHHhcccCCcEEEEecc
Q 021831          244 TIG-----AP---ETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       244 ~~g-----~~---~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      .--     ..   ..+..+.+.|+|||+++.+..
T Consensus       154 ~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~  187 (256)
T d1qzza2         154 SFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR  187 (256)
T ss_dssp             ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             cccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence            422     22   246778889999999998764

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=89.72  E-value=0.97  Score=33.75  Aligned_cols=94  Identities=17%  Similarity=0.216  Sum_probs=60.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEeC-CccH---HHHHHcCC-------ceEEe-------------CCChhHH
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASG-CHVSATCG-SKSI---DRVLAAGA-------EQAVD-------------YSSKDIE  231 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~-~~~~---~~~~~~g~-------~~v~~-------------~~~~~~~  231 (307)
                      +|.|+| -|.+|+++...+.... .+++++.. ..+.   ..+.+..-       +-.++             ++..+ .
T Consensus         3 kIgING-FGRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~-p   80 (169)
T d1u8fo1           3 KVGVNG-FGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERD-P   80 (169)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS-G
T ss_pred             EEEEEC-CcHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECCC-h
Confidence            688999 7999999998777554 68888854 3332   33433321       00010             00001 1


Q ss_pred             HHhc---CCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          232 LAIK---GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       232 ~~~~---~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      +.+.   -++|+|+||+|--.....+...+..|-+-|.+..|..
T Consensus        81 ~~i~W~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~~  124 (169)
T d1u8fo1          81 SKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSA  124 (169)
T ss_dssp             GGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCS
T ss_pred             hhCCccccCCCEEEEecceeccHHHHHHHHhcCCceEeeccccc
Confidence            1111   3799999999987677788888988888888888765

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=89.63  E-value=0.24  Score=39.24  Aligned_cols=33  Identities=24%  Similarity=0.370  Sum_probs=28.9

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG  207 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~  207 (307)
                      ..++|+|+|| |+.|++++..+++.|.+|+++-+
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er   35 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYER   35 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeC
Confidence            4689999996 99999999999999999888843

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=89.52  E-value=0.2  Score=40.17  Aligned_cols=32  Identities=28%  Similarity=0.382  Sum_probs=28.2

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG  207 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~  207 (307)
                      +++|+|+|| |.-|+.++..++..|.+|.++-.
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~   32 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEA   32 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeC
Confidence            578999996 99999999999999999888743

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=89.40  E-value=1.1  Score=29.50  Aligned_cols=67  Identities=18%  Similarity=0.191  Sum_probs=46.0

Q ss_pred             CEEEEEcCCchHHHHH-HHHHHHcCCEEEEEeCCcc--HHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCCh
Q 021831          176 QRLLVLGGGGAVGFAA-VQFSVASGCHVSATCGSKS--IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAP  248 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~-~~~a~~~G~~Vi~~~~~~~--~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~  248 (307)
                      .+|-++|- |++|+.+ +++++..|+.|.+....+.  .+.+++.|.......+.+.+     .+.|+|+-+.+-+
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~~i-----~~~d~vV~SsAI~   71 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPHSADNW-----YDPDLVIKTPAVR   71 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSCCTTSC-----CCCSEEEECTTCC
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeeeccccc-----CCCCEEEEecCcC
Confidence            46778884 8888854 7888999999999965543  46689999764322222222     3589888876643

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=89.34  E-value=0.48  Score=38.54  Aligned_cols=95  Identities=13%  Similarity=0.074  Sum_probs=59.4

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEE-eCCccHHHHHHc-----CC-----ceEEeCCChhHHHHhcCCccE
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSAT-CGSKSIDRVLAA-----GA-----EQAVDYSSKDIELAIKGKFDA  240 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~-~~~~~~~~~~~~-----g~-----~~v~~~~~~~~~~~~~~~~dv  240 (307)
                      ...++|||+|+  +-|..+..+++..+. +|.++ .+.+-.+.+++.     ++     ..++..+...+......++|+
T Consensus        74 ~~p~~vLiiGg--G~G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~D~~~~l~~~~~~yDv  151 (274)
T d1iy9a_          74 PNPEHVLVVGG--GDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDV  151 (274)
T ss_dssp             SSCCEEEEESC--TTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEE
T ss_pred             CCcceEEecCC--CCcHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEechHHHHHhhcCCCCCE
Confidence            34589999994  457777778877766 77666 444433333332     21     234444444555544468998


Q ss_pred             EEECCC----------ChhhHHHHHhcccCCcEEEEecc
Q 021831          241 VLDTIG----------APETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       241 vid~~g----------~~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      ||--..          +.+-+..+.++|+++|.++.-+.
T Consensus       152 Ii~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~~  190 (274)
T d1iy9a_         152 IMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD  190 (274)
T ss_dssp             EEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred             EEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEecC
Confidence            864322          23357888899999999998654

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=89.28  E-value=0.49  Score=33.22  Aligned_cols=39  Identities=28%  Similarity=0.506  Sum_probs=33.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~  210 (307)
                      .++++++++|.|| |.+|.-++..++.+|.+|..+.+.++
T Consensus        26 ~~~~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          26 GLRPQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             HCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             hhhcCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            4567899999995 99999999999999999988866543

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=89.27  E-value=0.053  Score=40.88  Aligned_cols=88  Identities=24%  Similarity=0.296  Sum_probs=48.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCcc-HHH---HHH-cCC--c--eEEeCCChhHHHHhcCCccEEEECCC
Q 021831          177 RLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKS-IDR---VLA-AGA--E--QAVDYSSKDIELAIKGKFDAVLDTIG  246 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~~~-~~~---~~~-~g~--~--~v~~~~~~~~~~~~~~~~dvvid~~g  246 (307)
                      +|.|+|++|.+|++.++++... ++++++....+. ...   +.+ .+.  .  .+.+    + .+.+...+|++||++-
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~----~-~~~~~~~~DViIDFs~   80 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQS----S-LDAVKDDFDVFIDFTR   80 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEES----C-STTTTTSCSEEEECSC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeec----c-HHHHhcccceEEEecc
Confidence            6899999999999999988765 567766643321 110   000 010  0  1111    1 1112245788888876


Q ss_pred             ChhhHHHHHhcccCCcEEEEeccC
Q 021831          247 APETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       247 ~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      -. .....++.....|.=+.+|-.
T Consensus        81 p~-~~~~~~~~a~~~~~~~ViGTT  103 (162)
T d1diha1          81 PE-GTLNHLAFCRQHGKGMVIGTT  103 (162)
T ss_dssp             HH-HHHHHHHHHHHTTCEEEECCC
T ss_pred             HH-HHHHHHHHHHhccceeEEecC
Confidence            65 444545555555555555543

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=89.27  E-value=0.39  Score=33.61  Aligned_cols=36  Identities=19%  Similarity=0.254  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~  210 (307)
                      ..++++|+|+ |.+|+-.++.++.+|.+|..+.+.++
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            4588999995 99999999999999999988866553

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=89.23  E-value=0.5  Score=35.25  Aligned_cols=86  Identities=8%  Similarity=0.100  Sum_probs=57.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhHHHHH
Q 021831          177 RLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGL  255 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~~~~~  255 (307)
                      +|.|+| .|.+|...+...+.. +++++++.+.....    .....+..+.+  ... ....+|+|+.|++.....+.+.
T Consensus         5 rvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~----~~~~~~~~~~~--~~~-~~~~~D~Vvi~tp~~~h~~~a~   76 (170)
T d1f06a1           5 RVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATL----DTKTPVFDVAD--VDK-HADDVDVLFLCMGSATDIPEQA   76 (170)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCC----SSSSCEEEGGG--GGG-TTTTCSEEEECSCTTTHHHHHH
T ss_pred             eEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEeccccc----ccccccccchh--hhh-hccccceEEEeCCCcccHHHHH
Confidence            689999 699999888877765 56888775433211    11122222221  111 1246999999999887888899


Q ss_pred             hcccCCcEEEEeccC
Q 021831          256 NFLKRGGHYMTLHGE  270 (307)
Q Consensus       256 ~~l~~~G~~v~~g~~  270 (307)
                      .+|+.|-++|++-.+
T Consensus        77 ~aL~aG~~vv~~~~~   91 (170)
T d1f06a1          77 PKFAQFACTVDTYDN   91 (170)
T ss_dssp             HHHTTTSEEECCCCC
T ss_pred             HHHHCCCcEEEecCc
Confidence            999999888876544

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=89.18  E-value=1.1  Score=32.66  Aligned_cols=85  Identities=13%  Similarity=0.034  Sum_probs=57.4

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHH-HHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhHHHH
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDR-VLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLG  254 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~-~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~~~~  254 (307)
                      +|.++| .|.+|.+.+.-....|.+++...++.+ .+. .+++|....     .+..+.+ ...|+||-|+.-. .+...
T Consensus         2 kIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~-----~~~~~~~-~~~dvIilavkp~-~~~~v   73 (152)
T d2ahra2           2 KIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYA-----MSHQDLI-DQVDLVILGIKPQ-LFETV   73 (152)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBC-----SSHHHHH-HTCSEEEECSCGG-GHHHH
T ss_pred             EEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeee-----chhhhhh-hccceeeeecchH-hHHHH
Confidence            578999 599999887766666888887766543 333 456675432     1222222 3489999988654 77788


Q ss_pred             HhcccCCcEEEEecc
Q 021831          255 LNFLKRGGHYMTLHG  269 (307)
Q Consensus       255 ~~~l~~~G~~v~~g~  269 (307)
                      +..++++..++.+..
T Consensus        74 l~~l~~~~~iis~~a   88 (152)
T d2ahra2          74 LKPLHFKQPIISMAA   88 (152)
T ss_dssp             HTTSCCCSCEEECCT
T ss_pred             hhhcccceeEecccc
Confidence            888888877776654

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=89.18  E-value=0.25  Score=40.67  Aligned_cols=33  Identities=21%  Similarity=0.307  Sum_probs=30.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG  207 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~  207 (307)
                      .|.+|+|.| .|.+|..+++++...|++|+++.+
T Consensus        35 ~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          35 GDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEc
Confidence            578999999 699999999999999999998864

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=89.17  E-value=0.24  Score=39.55  Aligned_cols=95  Identities=16%  Similarity=0.160  Sum_probs=55.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHH----HcCCceEEeCCChhH-HHHh--cCCccEEE
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVL----AAGAEQAVDYSSKDI-ELAI--KGKFDAVL  242 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~----~~g~~~v~~~~~~~~-~~~~--~~~~dvvi  242 (307)
                      -++++++||=+|.  +.|..+..+++.-..+|+++.-++. .+.++    ..+...-+.....+. ....  .+.||+|+
T Consensus        21 ~~~~~~~VLDlGC--G~G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~~~fD~V~   98 (252)
T d1ri5a_          21 YTKRGDSVLDLGC--GKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVIS   98 (252)
T ss_dssp             HCCTTCEEEEETC--TTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEE
T ss_pred             hCCCcCEEEEecc--cCcHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcccccccceEEE
Confidence            3578999999983  4476677777764458999966654 33333    333321111111111 1111  24799998


Q ss_pred             ECCCCh----------hhHHHHHhcccCCcEEEEe
Q 021831          243 DTIGAP----------ETERLGLNFLKRGGHYMTL  267 (307)
Q Consensus       243 d~~g~~----------~~~~~~~~~l~~~G~~v~~  267 (307)
                      ....-.          ..+..+.+.|+|||+++..
T Consensus        99 ~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          99 SQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             EESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             EcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            754321          2456677899999998864

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.16  E-value=0.32  Score=36.62  Aligned_cols=95  Identities=13%  Similarity=0.167  Sum_probs=59.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHH----HcCCc---eEEeCCChhHHHHhcCCccEEEECCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVL----AAGAE---QAVDYSSKDIELAIKGKFDAVLDTIG  246 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~----~~g~~---~v~~~~~~~~~~~~~~~~dvvid~~g  246 (307)
                      .|.+++|+|-+..+|.=.+.++...|+.|..........+.+    .....   .+..+..+...+. ....|++|.++|
T Consensus        28 ~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~-~~~aDIvIsavG  106 (171)
T d1edza1          28 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKC-SLDSDVVITGVP  106 (171)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHH-HHHCSEEEECCC
T ss_pred             CCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhc-cccCCEEEEccC
Confidence            689999999988999988888888999887553221110000    01111   1222222222222 234899999999


Q ss_pred             ChhhHHHHHhcccCCcEEEEeccC
Q 021831          247 APETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       247 ~~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      .+ .+..--..+++|..++.+|..
T Consensus       107 ~p-~~~i~~d~ik~GavvIDvGi~  129 (171)
T d1edza1         107 SE-NYKFPTEYIKEGAVCINFACT  129 (171)
T ss_dssp             CT-TCCBCTTTSCTTEEEEECSSS
T ss_pred             CC-ccccChhhcccCceEeecccc
Confidence            87 322234578899999999865

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=88.99  E-value=0.64  Score=34.72  Aligned_cols=92  Identities=17%  Similarity=0.170  Sum_probs=61.0

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCC-ccH---HHHHHcCC-------c---------------eEEeCCCh-
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASG-CHVSATCGS-KSI---DRVLAAGA-------E---------------QAVDYSSK-  228 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~-~~~---~~~~~~g~-------~---------------~v~~~~~~-  228 (307)
                      +|.|+| -|.+|.++...+.... .+++++-.. .+.   ..+.+..-       +               .++...++ 
T Consensus         2 kigING-fGRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p~   80 (166)
T d2b4ro1           2 KLGING-FGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPS   80 (166)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSGG
T ss_pred             eEEEEC-CCHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhhhcccccccceeeeccCCceEEecCcEEEEEeCCChH
Confidence            688999 7999999999887654 588887543 232   33433321       1               11111111 


Q ss_pred             --hHHHHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          229 --DIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       229 --~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                        +|.+   .++|+|+||+|--.....+...|..|-+-|.+..|..
T Consensus        81 ~i~W~~---~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~k  123 (166)
T d2b4ro1          81 QIPWGK---CQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPK  123 (166)
T ss_dssp             GCCHHH---HTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCS
T ss_pred             Hccccc---cCCCEEEEecccccchhhhhhhhccCCCEEEEecccc
Confidence              2333   2699999999987677788888988887788877754

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=88.67  E-value=0.36  Score=37.70  Aligned_cols=95  Identities=18%  Similarity=0.187  Sum_probs=54.2

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCcc-HH----HHHHcCCce---EEeCCChhHHHHhc----
Q 021831          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKS-ID----RVLAAGAEQ---AVDYSSKDIELAIK----  235 (307)
Q Consensus       170 ~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~~-~~----~~~~~g~~~---v~~~~~~~~~~~~~----  235 (307)
                      .......+||-+|  +..|..++.+|+.+  +.+|+++...++ .+    .++..|...   ++..+..+....+.    
T Consensus        52 v~~~kpk~ILEiG--t~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~e~l~~l~~~~~  129 (214)
T d2cl5a1          52 IREYSPSLVLELG--AYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYD  129 (214)
T ss_dssp             HHHHCCSEEEEEC--CTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGHHHHSC
T ss_pred             HHhhCCCEEEEEc--cCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeeccccccccchhhccc
Confidence            3344557999999  55777888888765  569999865443 22    245556532   22222222211111    


Q ss_pred             -CCccEEEECCCChh-----hHHHHHhcccCCcEEEE
Q 021831          236 -GKFDAVLDTIGAPE-----TERLGLNFLKRGGHYMT  266 (307)
Q Consensus       236 -~~~dvvid~~g~~~-----~~~~~~~~l~~~G~~v~  266 (307)
                       +.||++|--.....     .+..++++|+|||.++.
T Consensus       130 ~~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv~  166 (214)
T d2cl5a1         130 VDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLA  166 (214)
T ss_dssp             CCCEEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             ccccceeeecccccccccHHHHHHHhCccCCCcEEEE
Confidence             46997764332221     23445677999997664

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.51  E-value=2.6  Score=31.27  Aligned_cols=89  Identities=11%  Similarity=0.097  Sum_probs=59.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCcc---HHHHHHcCCc---eEEeCCChhHHHHhc-CCccEEEECCCCh
Q 021831          177 RLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKS---IDRVLAAGAE---QAVDYSSKDIELAIK-GKFDAVLDTIGAP  248 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~~~---~~~~~~~g~~---~v~~~~~~~~~~~~~-~~~dvvid~~g~~  248 (307)
                      ++.|+| .|.+|...++..+.. +++++++++...   ....++++..   .++    .++.+.+. ..+|+|+-++...
T Consensus         3 ki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~ll~~~~iD~v~I~tp~~   77 (184)
T d1ydwa1           3 RIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIH----GSYESLLEDPEIDALYVPLPTS   77 (184)
T ss_dssp             EEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEE----SSHHHHHHCTTCCEEEECCCGG
T ss_pred             EEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeec----CcHHHhhhccccceeeecccch
Confidence            578999 589998888777766 568888855432   2234555542   222    23444444 4799999999988


Q ss_pred             hhHHHHHhcccCCcEEEEeccCc
Q 021831          249 ETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       249 ~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ...+.+..+++.| +=|.+-.|.
T Consensus        78 ~h~~~~~~~l~~g-~~v~~EKP~   99 (184)
T d1ydwa1          78 LHVEWAIKAAEKG-KHILLEKPV   99 (184)
T ss_dssp             GHHHHHHHHHTTT-CEEEECSSC
T ss_pred             hhcchhhhhhhcc-ceeeccccc
Confidence            7788888888765 556666664

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.32  E-value=1.6  Score=35.98  Aligned_cols=72  Identities=24%  Similarity=0.296  Sum_probs=45.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc--cH---HHHH---HcCCceE-EeCCCh-hHHHHhc-CCccEEEEC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK--SI---DRVL---AAGAEQA-VDYSSK-DIELAIK-GKFDAVLDT  244 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~--~~---~~~~---~~g~~~v-~~~~~~-~~~~~~~-~~~dvvid~  244 (307)
                      ..|||+||+|-+|...+..+...|.+|+++.+..  ..   ....   .-+...+ .|..+. ++...+. .++|+||.+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   81 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence            4689999999999999999999999998875321  11   1111   1222212 233333 2333333 479999998


Q ss_pred             CCC
Q 021831          245 IGA  247 (307)
Q Consensus       245 ~g~  247 (307)
                      .+.
T Consensus        82 Aa~   84 (347)
T d1z45a2          82 AGL   84 (347)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            764

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=88.31  E-value=0.72  Score=32.86  Aligned_cols=40  Identities=23%  Similarity=0.463  Sum_probs=33.4

Q ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 021831          170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (307)
Q Consensus       170 ~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~  210 (307)
                      ..++++.+++|+|| |.+|+-++..++.+|.+|..+.+.++
T Consensus        30 ~~~~~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          30 RQLIADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             HTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             HhhccCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            34567899999995 99999999999999999988865543

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=88.25  E-value=0.37  Score=38.10  Aligned_cols=89  Identities=17%  Similarity=0.133  Sum_probs=55.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHH----HHcCCc-eEEeCCChhHHHHhcCCccEEEECCC
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRV----LAAGAE-QAVDYSSKDIELAIKGKFDAVLDTIG  246 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~----~~~g~~-~v~~~~~~~~~~~~~~~~dvvid~~g  246 (307)
                      .++++||=+|.  +.|..+..+++ .|.+|+++..++. .+.+    ...+.. .++..+..++.  ..+.||+|+...+
T Consensus        36 ~~~~~vLDiGC--G~G~~~~~l~~-~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~--~~~~fD~i~~~~~  110 (246)
T d1y8ca_          36 LVFDDYLDLAC--GTGNLTENLCP-KFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN--INRKFDLITCCLD  110 (246)
T ss_dssp             CCTTEEEEETC--TTSTTHHHHGG-GSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC--CSCCEEEEEECTT
T ss_pred             CCCCeEEEEeC--cCCHHHHHHHH-hCCccEeeccchhhhhhccccccccCccceeeccchhhhc--ccccccccceeee
Confidence            45678999984  36777777765 4889999966654 3333    334433 23322222211  2257999996433


Q ss_pred             C------h----hhHHHHHhcccCCcEEEE
Q 021831          247 A------P----ETERLGLNFLKRGGHYMT  266 (307)
Q Consensus       247 ~------~----~~~~~~~~~l~~~G~~v~  266 (307)
                      .      .    ..+..+.+.|+|||.++.
T Consensus       111 ~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         111 STNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             GGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             eeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            2      1    246788889999999885

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.22  E-value=0.23  Score=41.57  Aligned_cols=93  Identities=17%  Similarity=0.167  Sum_probs=51.8

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCccHHH----HHHcCCc---eEEeCCChhHHHHhcCCccE
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSIDR----VLAAGAE---QAVDYSSKDIELAIKGKFDA  240 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~~~~~~----~~~~g~~---~v~~~~~~~~~~~~~~~~dv  240 (307)
                      .....+|++||-+|.  +.|.++..++ ..|+ +|+++..++....    .++.+..   .++..+..++. .....+|+
T Consensus        33 ~~~~~~~~~VLDlGc--GtG~ls~~aa-~~Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~~~~~l~-~~~~~~D~  108 (328)
T d1g6q1_          33 NKDLFKDKIVLDVGC--GTGILSMFAA-KHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVH-LPFPKVDI  108 (328)
T ss_dssp             HHHHHTTCEEEEETC--TTSHHHHHHH-HTCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSC-CSSSCEEE
T ss_pred             ccccCCcCEEEEeCC--CCCHHHHHHH-HhCCCEEEEEeCCHHHHHHHHHHHHhCccccceEEEeehhhcc-CcccceeE
Confidence            334557999999984  3566665444 4687 8888866553322    3344432   23333222211 01147999


Q ss_pred             EEECCCC--------hh-hHHHHHhcccCCcEEE
Q 021831          241 VLDTIGA--------PE-TERLGLNFLKRGGHYM  265 (307)
Q Consensus       241 vid~~g~--------~~-~~~~~~~~l~~~G~~v  265 (307)
                      |+...-.        .. .+...-++|+|||+++
T Consensus       109 i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         109 IISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             EEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             EEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            8764221        11 2334447899999885

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=88.16  E-value=1.4  Score=33.30  Aligned_cols=88  Identities=15%  Similarity=0.138  Sum_probs=57.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChh----
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE----  249 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~----  249 (307)
                      .+.+|.|+| .|.+|...+++++.+|++|+...+.....      ........  ++.+.+ ...|+++-+++-..    
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~------~~~~~~~~--~l~ell-~~sDii~i~~plt~~T~~  112 (188)
T d1sc6a1          43 RGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLP------LGNATQVQ--HLSDLL-NMSDVVSLHVPENPSTKN  112 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCC------CTTCEECS--CHHHHH-HHCSEEEECCCSSTTTTT
T ss_pred             cceEEEEee-cccchhhhhhhcccccceEeeccccccch------hhhhhhhh--hHHHHH-hhccceeecccCCcchhh
Confidence            578999999 69999999999999999999986543211      01111111  222222 22688877765321    


Q ss_pred             -hHHHHHhcccCCcEEEEeccCc
Q 021831          250 -TERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       250 -~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                       .-...++.|+++..+|-++-..
T Consensus       113 li~~~~l~~mk~~a~lIN~aRG~  135 (188)
T d1sc6a1         113 MMGAKEISLMKPGSLLINASRGT  135 (188)
T ss_dssp             CBCHHHHHHSCTTEEEEECSCSS
T ss_pred             hccHHHHhhCCCCCEEEEcCcHH
Confidence             1256677788888888877543

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.10  E-value=0.25  Score=36.13  Aligned_cols=33  Identities=27%  Similarity=0.688  Sum_probs=29.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG  207 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~  207 (307)
                      .|.+|||+|| |.+|+.-+..+...|++|+++..
T Consensus        12 ~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          12 KDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             TTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            5899999996 99999999999999999888854

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=87.97  E-value=0.69  Score=38.28  Aligned_cols=96  Identities=16%  Similarity=0.108  Sum_probs=57.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEE-eCCccHHHHHHcCC----------ceEEeCCChhHHHHhcCCccE
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSAT-CGSKSIDRVLAAGA----------EQAVDYSSKDIELAIKGKFDA  240 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~-~~~~~~~~~~~~g~----------~~v~~~~~~~~~~~~~~~~dv  240 (307)
                      ...++|||+|+  +-|..+-.+++.... +|..+ .+.+-.+.+++.-.          ..++..+...+.....+.||+
T Consensus       105 ~~pk~VLIiGg--G~G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~~~~~yDv  182 (312)
T d2b2ca1         105 PDPKRVLIIGG--GDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDV  182 (312)
T ss_dssp             SSCCEEEEESC--TTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEE
T ss_pred             CCCCeEEEeCC--CchHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHhCCCCCCE
Confidence            34578999994  456667777777665 67666 44443444444321          123222223444433358998


Q ss_pred             EEECCCC----------hhhHHHHHhcccCCcEEEEeccC
Q 021831          241 VLDTIGA----------PETERLGLNFLKRGGHYMTLHGE  270 (307)
Q Consensus       241 vid~~g~----------~~~~~~~~~~l~~~G~~v~~g~~  270 (307)
                      ||--...          .+-+..+.++|+++|.++.-+..
T Consensus       183 II~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~~s  222 (312)
T d2b2ca1         183 IITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGES  222 (312)
T ss_dssp             EEECCC-------------HHHHHHHHEEEEEEEEEECCC
T ss_pred             EEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEecCC
Confidence            8743322          22457788899999999987653

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=87.94  E-value=0.39  Score=37.74  Aligned_cols=37  Identities=24%  Similarity=0.376  Sum_probs=31.3

Q ss_pred             CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 021831          172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK  209 (307)
Q Consensus       172 ~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~  209 (307)
                      .+.+++|+|+|| |+.|+.++..++..|.+|..+-..+
T Consensus        46 ~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             ccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            356889999996 9999999999999999888875433

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=87.83  E-value=0.61  Score=38.67  Aligned_cols=94  Identities=18%  Similarity=0.202  Sum_probs=56.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEE-eCCccHHHHHHc------C-----CceEEeCCChhHHHHhcCCcc
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSAT-CGSKSIDRVLAA------G-----AEQAVDYSSKDIELAIKGKFD  239 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~-~~~~~~~~~~~~------g-----~~~v~~~~~~~~~~~~~~~~d  239 (307)
                      ...++|||+|+  +.|..+-++++.... +|.++ .+.+-.+.+++.      +     ..+++..+...+.+...++||
T Consensus        76 ~~pk~VLiiG~--G~G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~~Da~~~l~~~~~~yD  153 (312)
T d1uira_          76 PEPKRVLIVGG--GEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYD  153 (312)
T ss_dssp             SCCCEEEEEEC--TTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEE
T ss_pred             CCcceEEEeCC--CchHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEEchHHHHhhhcCCccc
Confidence            34679999995  456777777776654 77776 444433333321      1     123444444445444446899


Q ss_pred             EEEE-C---CCC---------hhhHHHHHhcccCCcEEEEec
Q 021831          240 AVLD-T---IGA---------PETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       240 vvid-~---~g~---------~~~~~~~~~~l~~~G~~v~~g  268 (307)
                      +||- .   .+.         .+.+..+.++|+++|.++.-.
T Consensus       154 vIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~~  195 (312)
T d1uira_         154 VVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT  195 (312)
T ss_dssp             EEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred             EEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEec
Confidence            8863 3   121         224577889999999988744

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.82  E-value=0.52  Score=33.09  Aligned_cols=36  Identities=22%  Similarity=0.333  Sum_probs=30.8

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~  210 (307)
                      ..++++|+|| |.+|+-+++++..+|.+|..+.+.++
T Consensus        22 ~p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          22 IPKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            3479999995 99999999999999999988865543

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=87.78  E-value=0.22  Score=40.22  Aligned_cols=61  Identities=16%  Similarity=0.265  Sum_probs=38.2

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccHHHHHHcCCceEEeCCCh-hHHHHhcC-CccEEEECCCC
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK-DIELAIKG-KFDAVLDTIGA  247 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~-~~dvvid~~g~  247 (307)
                      +|||+||+|-+|...+..+...|- ++.+......         ...|..+. .+.+.+.+ ++|+||.+++.
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~---------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~   64 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE---------FCGDFSNPKGVAETVRKLRPDVIVNAAAH   64 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS---------SCCCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc---------ccCcCCCHHHHHHHHHHcCCCEEEEeccc
Confidence            699999999999999888777664 4444332211         11233332 23333433 68999998863

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=87.64  E-value=0.55  Score=32.57  Aligned_cols=34  Identities=18%  Similarity=0.161  Sum_probs=29.7

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK  209 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~  209 (307)
                      .++++|+|+ |.+|+-+++.++.+|.+|..+.+.+
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            478999995 9999999999999999998886554

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.41  E-value=2.6  Score=30.74  Aligned_cols=122  Identities=16%  Similarity=0.149  Sum_probs=64.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHcCC-------------ceEEeCC-Ch-hHHHHhc----
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGA-------------EQAVDYS-SK-DIELAIK----  235 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~g~-------------~~v~~~~-~~-~~~~~~~----  235 (307)
                      .+|-++| .|.+|...+.-+...|.+|.+..++.+ .+.+...+.             +.++..- .. ...+.+.    
T Consensus         2 ~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~   80 (162)
T d3cuma2           2 KQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDG   80 (162)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTC
T ss_pred             CEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhcccc
Confidence            3688999 699999888877778999988766543 333444443             2222111 11 1111111    


Q ss_pred             -----CCccEEEECCCC-hhhHHHHHhcc-cCCcEEEEeccCc---ccccccccceechhHHHHHHHHHHHhh
Q 021831          236 -----GKFDAVLDTIGA-PETERLGLNFL-KRGGHYMTLHGET---AALADHYGLALGLPIATTVLLKKRMQT  298 (307)
Q Consensus       236 -----~~~dvvid~~g~-~~~~~~~~~~l-~~~G~~v~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (307)
                           ..=++++|++.. +.......+.+ +.+.+|+.+....   ....+.-.+.++......+..+..+..
T Consensus        81 ~~~~l~~g~iiid~st~~p~~~~~~~~~~~~~gi~~~dapv~Gg~~~a~~G~l~~~~gG~~~~~~~~~~il~~  153 (162)
T d3cuma2          81 LLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKARPLFEA  153 (162)
T ss_dssp             HHHHSCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHHHHHHTCEEEEEESCHHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEECCCCCHHHHHHHHHHHHHCCCcEEecccccCccccccCCeEEEecCCHHHHHHHHHHHHH
Confidence                 112577776554 33334444444 4567777654322   222333344455555555555555543

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.21  E-value=0.77  Score=37.27  Aligned_cols=94  Identities=18%  Similarity=0.143  Sum_probs=53.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE-eCCccHHHHHHcC-------------C---ceEEeCCChhHHHHhc
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKSIDRVLAAG-------------A---EQAVDYSSKDIELAIK  235 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~-~~~~~~~~~~~~g-------------~---~~v~~~~~~~~~~~~~  235 (307)
                      ...++|||+|+  +-|..+-++++....+|.++ .+.+-.+.++++-             .   -+++..+...+.+. .
T Consensus        71 ~~p~~vLiiG~--G~G~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da~~~l~~-~  147 (276)
T d1mjfa_          71 PKPKRVLVIGG--GDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-N  147 (276)
T ss_dssp             SCCCEEEEEEC--TTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-C
T ss_pred             CCCceEEEecC--CchHHHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEChHHHHHhc-c
Confidence            45689999995  34555555565433376665 3333334343311             1   13444333344432 2


Q ss_pred             CCccEEEE-CCCC---------hhhHHHHHhcccCCcEEEEecc
Q 021831          236 GKFDAVLD-TIGA---------PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       236 ~~~dvvid-~~g~---------~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      ++||+||- ....         .+-+..+.++|+++|.++.-++
T Consensus       148 ~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~~  191 (276)
T d1mjfa_         148 RGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG  191 (276)
T ss_dssp             CCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEecC
Confidence            57998764 3321         2346788899999999987543

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.98  E-value=0.34  Score=36.28  Aligned_cols=34  Identities=21%  Similarity=0.323  Sum_probs=29.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~  210 (307)
                      +|.|+||+|.+|.+.++.+...|.+|+...|+++
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e   35 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREE   35 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence            6889977899999999999999999998877644

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=86.89  E-value=0.45  Score=33.50  Aligned_cols=37  Identities=19%  Similarity=0.253  Sum_probs=31.8

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~  210 (307)
                      +..++++|+|+ |.+|+-++++...+|.+|..+-+.++
T Consensus        23 ~~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          23 EIPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             SCCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             ccCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            34689999995 99999999999999999998866553

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.76  E-value=1.2  Score=33.88  Aligned_cols=33  Identities=27%  Similarity=0.463  Sum_probs=28.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK  209 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~  209 (307)
                      ++|.|+|+ |.+|...++++...|.+|+....++
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~   37 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTE   37 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECCh
Confidence            58999996 9999999999999999999886554

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.60  E-value=0.6  Score=38.16  Aligned_cols=95  Identities=13%  Similarity=0.055  Sum_probs=56.3

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEE-eCCccHHHHHHcC----------CceEEeCCChhHHHHhcCCccE
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSAT-CGSKSIDRVLAAG----------AEQAVDYSSKDIELAIKGKFDA  240 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~-~~~~~~~~~~~~g----------~~~v~~~~~~~~~~~~~~~~dv  240 (307)
                      ...++|||+|+  +-|..+-.+++..+. +|.++ .+.+-.+.+++.-          ..+++..+...+.+...++||+
T Consensus        77 ~~pk~vLiiGg--G~G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~Da~~~l~~~~~~yDv  154 (285)
T d2o07a1          77 PNPRKVLIIGG--GDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDV  154 (285)
T ss_dssp             SSCCEEEEEEC--TTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEE
T ss_pred             cCcCeEEEeCC--CchHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEccHHHHHhcCCCCCCE
Confidence            45689999994  456677777777665 66665 4444334333221          1233333333444443368998


Q ss_pred             EEECCCC----------hhhHHHHHhcccCCcEEEEecc
Q 021831          241 VLDTIGA----------PETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       241 vid~~g~----------~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      ||--..+          .+.+..+.++|+++|.++.-+.
T Consensus       155 Ii~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~~  193 (285)
T d2o07a1         155 IITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGE  193 (285)
T ss_dssp             EEEECC-----------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEecc
Confidence            7643221          2246778889999999988654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.59  E-value=0.47  Score=33.35  Aligned_cols=34  Identities=24%  Similarity=0.301  Sum_probs=29.4

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~  208 (307)
                      ..++++|+|| |.+|+-.+++++.+|.+|..+.++
T Consensus        19 ~P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            4578999996 999999999999999988887654

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=86.48  E-value=0.63  Score=32.16  Aligned_cols=35  Identities=29%  Similarity=0.375  Sum_probs=30.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~  210 (307)
                      .++++|.|| |.+|+-+++.++.+|.+|..+.+.++
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence            489999995 99999999999999999988865543

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=86.06  E-value=0.53  Score=38.43  Aligned_cols=33  Identities=24%  Similarity=0.176  Sum_probs=28.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~  208 (307)
                      .+|||+||+|-+|...++.+...|..++.+.+.
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~   35 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR   35 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCc
Confidence            479999999999999999999999987766443

>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=86.02  E-value=0.53  Score=35.37  Aligned_cols=92  Identities=13%  Similarity=0.130  Sum_probs=58.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHc-CCEEEEEeCCccHH---HHHHcCC-------c---------------eEEeCCCh--
Q 021831          177 RLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSID---RVLAAGA-------E---------------QAVDYSSK--  228 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~-G~~Vi~~~~~~~~~---~~~~~g~-------~---------------~v~~~~~~--  228 (307)
                      +|.|+| -|.+|.++...+... ..+++++-.....+   .+.+..-       +               .+....++  
T Consensus         3 kIgING-fGRIGR~v~R~~l~~~~~~ivaINd~~d~~~~ayll~yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~p~~   81 (171)
T d3cmco1           3 KVGING-FGRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPEN   81 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             EEEEEC-CCHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHhhhhcccccCCcccccccccCCCEEeCCcceeeEecCCHHH
Confidence            578999 799999998887655 35888885443433   2333221       0               01111111  


Q ss_pred             -hHHHHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          229 -DIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       229 -~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                       +|.+   -++|+||||+|.-.....+...|..|-+-|.+..|..
T Consensus        82 i~W~~---~~vDiViEcTG~f~t~~~~~~hl~~gakkViiSap~~  123 (171)
T d3cmco1          82 LAWGE---IGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAK  123 (171)
T ss_dssp             CCTGG---GTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB
T ss_pred             ccccc---cCCcEEEEecCccCCHHHHHHHHhCCCceEEEecccc
Confidence             1111   2699999999987777888888888877777777754

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=86.00  E-value=0.62  Score=36.37  Aligned_cols=34  Identities=24%  Similarity=0.465  Sum_probs=29.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG  207 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~  207 (307)
                      +.-.+|+|+|| |..|++++..+.+.|.+|..+.+
T Consensus         4 ~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier   37 (268)
T d1c0pa1           4 HSQKRVVVLGS-GVIGLSSALILARKGYSVHILAR   37 (268)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEES
T ss_pred             CCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeC
Confidence            44568999996 99999999999999999887754

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=85.82  E-value=0.5  Score=38.33  Aligned_cols=38  Identities=21%  Similarity=0.399  Sum_probs=31.0

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK  209 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~  209 (307)
                      ......+|+|+|| |..|+.++..+...|.+|.++-..+
T Consensus        26 ~~~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          26 ATSNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             CCSSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3455679999995 9999999999999999988875443

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=85.81  E-value=0.4  Score=39.52  Aligned_cols=94  Identities=14%  Similarity=0.134  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEE-eCCccHHHHHHcC----------CceEEeCCChhHHHHhcCCccEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGC-HVSAT-CGSKSIDRVLAAG----------AEQAVDYSSKDIELAIKGKFDAV  241 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~-~~~~~~~~~~~~g----------~~~v~~~~~~~~~~~~~~~~dvv  241 (307)
                      ..++|||+|+  +-|..+-++++..+. +|.++ .+.+-.+.+++.-          .-+++..+...+.+...+.||+|
T Consensus        89 ~pk~VLiiGg--G~G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDvI  166 (295)
T d1inla_          89 NPKKVLIIGG--GDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVI  166 (295)
T ss_dssp             SCCEEEEEEC--TTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEE
T ss_pred             CCceEEEecC--CchHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhhhHHHHHhcCCCCCCEE
Confidence            4579999995  445666777776665 67666 4443333333321          11333333333333333579988


Q ss_pred             EECCC-----------ChhhHHHHHhcccCCcEEEEecc
Q 021831          242 LDTIG-----------APETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       242 id~~g-----------~~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      |--..           +.+.+..+.++|+++|.++.-..
T Consensus       167 i~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~~  205 (295)
T d1inla_         167 IIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE  205 (295)
T ss_dssp             EEEC----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEecC
Confidence            64221           23356788899999999988654

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=85.79  E-value=1.2  Score=33.43  Aligned_cols=92  Identities=13%  Similarity=0.115  Sum_probs=57.8

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC---CEEEEEeCCccHH---HHHHcCC------ceE---------Ee--------CCC
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASG---CHVSATCGSKSID---RVLAAGA------EQA---------VD--------YSS  227 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G---~~Vi~~~~~~~~~---~~~~~g~------~~v---------~~--------~~~  227 (307)
                      +|.|+| -|.+|.++...+..+.   .+++++-+....+   .+.+..-      ..+         ++        ..+
T Consensus         2 kIgING-fGRIGR~v~R~~~~~~~~~i~ivaINd~~~~~~~ayLlkyDSvhG~~~~~i~~~~~~~~~ing~~I~~~~~~~   80 (172)
T d1rm4a1           2 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRN   80 (172)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCSC
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEEcCCCCHHHHHHHHhcCcccccccceeEecCCcceEECCEEEEEecCCC
Confidence            588999 7999999998766433   4677774443332   2333320      011         11        111


Q ss_pred             h---hHHHHhcCCccEEEECCCChhhHHHHHhcccCCcEEEEeccCcc
Q 021831          228 K---DIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       228 ~---~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      +   +|.+   .++|+|+||+|.-.....+...|..|-+-|.+..|..
T Consensus        81 p~~i~W~~---~gvDiViEcTG~f~~~~~~~~hl~~GakkViiSAP~k  125 (172)
T d1rm4a1          81 PVNLPWGD---MGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGK  125 (172)
T ss_dssp             GGGSCHHH---HTCCEEEECSSSCCBHHHHHHHHHTTCSCEEESSCCB
T ss_pred             hHHCChhh---cCCCEEEecCceEccHHHHHHHHhcCCceEEeecccc
Confidence            1   1222   2699999999986677778888888877777777764

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=85.75  E-value=0.96  Score=35.62  Aligned_cols=46  Identities=26%  Similarity=0.274  Sum_probs=35.3

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-ccHHH-HHHcCCc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSIDR-VLAAGAE  220 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~~~~~-~~~~g~~  220 (307)
                      .|.+|+|.| .|.+|..+++++...|++++++... .+.+. ....|..
T Consensus        38 ~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~   85 (230)
T d1leha1          38 EGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGAD   85 (230)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCc
Confidence            689999999 6999999999999999999987543 33333 3445543

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=85.69  E-value=0.72  Score=32.52  Aligned_cols=36  Identities=19%  Similarity=0.344  Sum_probs=30.9

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK  209 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~  209 (307)
                      +..++++|+|+ |.+|+=+++..+.+|.+|..+.+.+
T Consensus        24 ~~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             ccCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            44689999995 9999999999999999998886544

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=85.53  E-value=3.9  Score=30.22  Aligned_cols=89  Identities=17%  Similarity=0.115  Sum_probs=59.1

Q ss_pred             EEEEEcCCchHHHH-HHHHHHHc-C-CEEEEEeCCccH---HHHHHcCCceEEeCCChhHHHHhc-CCccEEEECCCChh
Q 021831          177 RLLVLGGGGAVGFA-AVQFSVAS-G-CHVSATCGSKSI---DRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPE  249 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~-~~~~a~~~-G-~~Vi~~~~~~~~---~~~~~~g~~~v~~~~~~~~~~~~~-~~~dvvid~~g~~~  249 (307)
                      +|.|+| .|.+|.- .+...+.. + ++++++++....   ...+.++...+++    ++.+.+. ..+|+|+-++....
T Consensus         5 rigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~----~~~ell~~~~id~v~I~tp~~~   79 (181)
T d1zh8a1           5 RLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD----SYEELLESGLVDAVDLTLPVEL   79 (181)
T ss_dssp             EEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES----CHHHHHHSSCCSEEEECCCGGG
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee----eeeccccccccceeeccccccc
Confidence            688999 5888864 45656554 3 478888654332   2345667655542    4555555 47999999999886


Q ss_pred             hHHHHHhcccCCcEEEEeccCc
Q 021831          250 TERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       250 ~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ....+..+++.| +=|++-.|.
T Consensus        80 h~~~~~~al~~g-k~V~~EKPl  100 (181)
T d1zh8a1          80 NLPFIEKALRKG-VHVICEKPI  100 (181)
T ss_dssp             HHHHHHHHHHTT-CEEEEESSS
T ss_pred             cccccccccccc-hhhhcCCCC
Confidence            777777777764 667777764

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.50  E-value=0.81  Score=32.11  Aligned_cols=35  Identities=17%  Similarity=0.235  Sum_probs=30.5

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~  210 (307)
                      .++++|+|+ |.+|+-++..++.+|.+|..+.++++
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence            478999995 99999999999999999998876543

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=85.41  E-value=0.44  Score=37.18  Aligned_cols=97  Identities=14%  Similarity=0.185  Sum_probs=57.3

Q ss_pred             HHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc-cHHHHHHcCCc--eEEeCCChhHHHHhcCCccEEE
Q 021831          166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SIDRVLAAGAE--QAVDYSSKDIELAIKGKFDAVL  242 (307)
Q Consensus       166 l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~-~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~dvvi  242 (307)
                      ++......++.+||=+|  .+.|..+..+++ .|.+|+++..++ ..+.+++...+  .++..+..++.  ..+.||+|+
T Consensus        12 ~~~~~~~~~~~~VLDiG--cG~G~~~~~l~~-~g~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~~~--~~~~fD~I~   86 (225)
T d2p7ia1          12 VRAFTPFFRPGNLLELG--SFKGDFTSRLQE-HFNDITCVEASEEAISHAQGRLKDGITYIHSRFEDAQ--LPRRYDNIV   86 (225)
T ss_dssp             HHHHGGGCCSSCEEEES--CTTSHHHHHHTT-TCSCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCC--CSSCEEEEE
T ss_pred             HHHhhhhCCCCcEEEEe--CCCcHHHHHHHH-cCCeEEEEeCcHHHhhhhhcccccccccccccccccc--ccccccccc
Confidence            34444555677899998  456877776654 588999996654 34555543322  22332222211  125799997


Q ss_pred             ECC-----CChh-hHHHHH-hcccCCcEEEEe
Q 021831          243 DTI-----GAPE-TERLGL-NFLKRGGHYMTL  267 (307)
Q Consensus       243 d~~-----g~~~-~~~~~~-~~l~~~G~~v~~  267 (307)
                      ..-     .++. .+..+. ++|+|||.++..
T Consensus        87 ~~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          87 LTHVLEHIDDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             EESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             ccceeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence            542     2222 345555 679999998864

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.32  E-value=0.44  Score=39.48  Aligned_cols=32  Identities=22%  Similarity=0.312  Sum_probs=28.8

Q ss_pred             EE-EEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 021831          177 RL-LVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (307)
Q Consensus       177 ~V-lI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~  208 (307)
                      +| ||+||+|-+|..++..+...|.+|+++.+.
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~   34 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRR   34 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence            57 999999999999999999899999998763

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=85.02  E-value=7.8  Score=30.84  Aligned_cols=99  Identities=16%  Similarity=0.193  Sum_probs=60.5

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-C---ccHHHHHHcCCceEEeCCChhHH-------------
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-S---KSIDRVLAAGAEQAVDYSSKDIE-------------  231 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~---~~~~~~~~~g~~~v~~~~~~~~~-------------  231 (307)
                      ...++++.+|+... +|..|++++..++.+|.+++.+.. .   .+.+.++.+|++-++...+.++.             
T Consensus        54 ~g~~~~~~~vv~aS-sGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~~  132 (292)
T d2bhsa1          54 RGEIKPGDVLIEAT-SGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRG  132 (292)
T ss_dssp             TTSCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHHT
T ss_pred             hCCcCCCceeeeec-ccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhccccc
Confidence            34556666555555 799999999999999997665532 2   22455778887644322221110             


Q ss_pred             ----------------------HHhc----CCccEEEECCCChhh---HHHHHhcccCCcEEEEec
Q 021831          232 ----------------------LAIK----GKFDAVLDTIGAPET---ERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       232 ----------------------~~~~----~~~dvvid~~g~~~~---~~~~~~~l~~~G~~v~~g  268 (307)
                                            ..+.    +.+|.++-++|+...   +...++...+..+++.+-
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Ve  198 (292)
T d2bhsa1         133 EGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQ  198 (292)
T ss_dssp             SSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEE
T ss_pred             cccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEec
Confidence                                  0000    358999998887533   345555666777776654

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=85.00  E-value=0.9  Score=34.37  Aligned_cols=33  Identities=21%  Similarity=0.231  Sum_probs=28.0

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK  209 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~  209 (307)
                      ++|.|+|+ |.+|...+.++...|.+|+....+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~   37 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINE   37 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCH
Confidence            57999996 9999998888888899999886554

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=84.74  E-value=3.6  Score=30.30  Aligned_cols=95  Identities=16%  Similarity=0.180  Sum_probs=51.4

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HH----HHHHcCCc-eEEeCCChhHHHHhc---CCccEE
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-ID----RVLAAGAE-QAVDYSSKDIELAIK---GKFDAV  241 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~----~~~~~g~~-~v~~~~~~~~~~~~~---~~~dvv  241 (307)
                      .+.+|.+||=.++  ++|...+..+ ..|++++.+..+.+ .+    .++.++.. .+.......+.....   ..||+|
T Consensus        38 ~~~~g~~vLDl~~--G~G~~~i~a~-~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~I  114 (171)
T d1ws6a1          38 RYPRRGRFLDPFA--GSGAVGLEAA-SEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVA  114 (171)
T ss_dssp             HCTTCCEEEEETC--SSCHHHHHHH-HTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEE
T ss_pred             cccCCCeEEEecc--ccchhhhhhh-hccchhhhcccCHHHHhhhhHHHHhhccccceeeeehhcccccccccCCcccee
Confidence            4567888876653  3344444433 46998887644333 22    24556654 444444333333222   579998


Q ss_pred             EE-C---CCChhhHHHHH--hcccCCcEEEEec
Q 021831          242 LD-T---IGAPETERLGL--NFLKRGGHYMTLH  268 (307)
Q Consensus       242 id-~---~g~~~~~~~~~--~~l~~~G~~v~~g  268 (307)
                      |- .   .+....+..++  ..++++|.++.-.
T Consensus       115 f~DPPY~~~~~~~l~~l~~~~ll~~~g~ivie~  147 (171)
T d1ws6a1         115 FMAPPYAMDLAALFGELLASGLVEAGGLYVLQH  147 (171)
T ss_dssp             EECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEE
T ss_pred             EEccccccCHHHHHHHHHHcCCcCCCeEEEEEe
Confidence            74 2   22233444443  3688999887643

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=84.64  E-value=2.9  Score=29.99  Aligned_cols=78  Identities=15%  Similarity=0.219  Sum_probs=44.9

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC-CEEEEEeCCcc-HHHH-HHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhHHH
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKS-IDRV-LAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERL  253 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G-~~Vi~~~~~~~-~~~~-~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~~~  253 (307)
                      +|.++|+ |.+|.+.++-+...| .++++..++.+ .+.+ ++.+.. +.+..+ .    + ...|+||=++.-. .+..
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~-~~~~~~-~----v-~~~Div~lavkP~-~~~~   72 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVE-TSATLP-E----L-HSDDVLILAVKPQ-DMEA   72 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCE-EESSCC-C----C-CTTSEEEECSCHH-HHHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccc-cccccc-c----c-cccceEEEecCHH-HHHH
Confidence            5889995 999998877444445 68888766544 3333 455653 222111 1    1 2367777776533 4555


Q ss_pred             HHhcccCCcE
Q 021831          254 GLNFLKRGGH  263 (307)
Q Consensus       254 ~~~~l~~~G~  263 (307)
                      .++-+++.++
T Consensus        73 v~~~l~~~~~   82 (152)
T d1yqga2          73 ACKNIRTNGA   82 (152)
T ss_dssp             HHTTCCCTTC
T ss_pred             hHHHHhhccc
Confidence            5555554443

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.64  E-value=0.62  Score=38.56  Aligned_cols=33  Identities=15%  Similarity=0.124  Sum_probs=30.0

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG  207 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~  207 (307)
                      -.++||+||+|-+|...+..+...|.+|+++.+
T Consensus        16 ~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~   48 (341)
T d1sb8a_          16 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN   48 (341)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            467999999999999999999999999999864

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.25  E-value=0.54  Score=36.54  Aligned_cols=95  Identities=12%  Similarity=0.032  Sum_probs=59.6

Q ss_pred             CCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc-HHHHHHc----CCc--eEEeCCChhHHHHhcCCccEEEE
Q 021831          171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAA----GAE--QAVDYSSKDIELAIKGKFDAVLD  243 (307)
Q Consensus       171 ~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~-~~~~~~~----g~~--~v~~~~~~~~~~~~~~~~dvvid  243 (307)
                      ...++.+||=+|  .+.|..+..+++..+.+|+++.-+++ .+.+++.    +..  ..+..+..++.. ..+.||+|+.
T Consensus        57 ~~~~~~~vLDiG--cG~G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~~~~-~~~~fD~I~~  133 (222)
T d2ex4a1          57 NKTGTSCALDCG--AGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTP-EPDSYDVIWI  133 (222)
T ss_dssp             -CCCCSEEEEET--CTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCC-CSSCEEEEEE
T ss_pred             CCCCCCEEEEec--cCCCHhhHHHHHhcCCEEEEeecCHHHhhcccccccccccccccccccccccccc-cccccccccc
Confidence            456788999998  56788888887776678999865544 3444432    222  222322222210 1257999987


Q ss_pred             CC-----CCh---hhHHHHHhcccCCcEEEEec
Q 021831          244 TI-----GAP---ETERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       244 ~~-----g~~---~~~~~~~~~l~~~G~~v~~g  268 (307)
                      ..     ..+   ..+..+.+.|+|+|.++..-
T Consensus       134 ~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~  166 (222)
T d2ex4a1         134 QWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD  166 (222)
T ss_dssp             ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ccccccchhhhhhhHHHHHHHhcCCcceEEEEE
Confidence            43     222   35678888999999998864

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=84.17  E-value=1.4  Score=34.77  Aligned_cols=35  Identities=29%  Similarity=0.262  Sum_probs=29.5

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHH-HHcCCEEEEEeCC
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFS-VASGCHVSATCGS  208 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a-~~~G~~Vi~~~~~  208 (307)
                      -.|.+|+|.| .|.+|..+++++ +..|++++++.+.
T Consensus        29 l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd~   64 (234)
T d1b26a1          29 PKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSDS   64 (234)
T ss_dssp             TTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEET
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeecC
Confidence            3689999999 699999999887 5789999988643

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=84.17  E-value=0.84  Score=36.94  Aligned_cols=97  Identities=10%  Similarity=0.220  Sum_probs=61.1

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHc--CCEEEEEeCCcc-HHHH----HHcCCceE-EeCCChhHHHHhcCCccE
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKS-IDRV----LAAGAEQA-VDYSSKDIELAIKGKFDA  240 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~--G~~Vi~~~~~~~-~~~~----~~~g~~~v-~~~~~~~~~~~~~~~~dv  240 (307)
                      ..++.++.+||=+|  .+.|..+..+++..  +.+|+++.-++. .+.+    ...+.+.- ...+..++  ...++||+
T Consensus        22 ~~~~~~~~~ILDiG--cG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~--~~~~~fD~   97 (281)
T d2gh1a1          22 VWKITKPVHIVDYG--CGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI--ELNDKYDI   97 (281)
T ss_dssp             TSCCCSCCEEEEET--CTTTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTTC--CCSSCEEE
T ss_pred             HhccCCcCEEEEec--CcCCHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccccccccc--cccCCceE
Confidence            34667888999988  34688888888764  568999865543 3333    33343321 22221111  11257999


Q ss_pred             EEECCC-----Ch-hhHHHHHhcccCCcEEEEecc
Q 021831          241 VLDTIG-----AP-ETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       241 vid~~g-----~~-~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      |+....     ++ ..+..+.+.|+|||.++..-.
T Consensus        98 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~~  132 (281)
T d2gh1a1          98 AICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEP  132 (281)
T ss_dssp             EEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             EEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEEC
Confidence            987532     32 367889999999999987653

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=84.12  E-value=1.1  Score=36.68  Aligned_cols=95  Identities=16%  Similarity=0.104  Sum_probs=57.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEE-eCCccHHHHHHcC----------CceEEeCCChhHHHHhc-CCcc
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSAT-CGSKSIDRVLAAG----------AEQAVDYSSKDIELAIK-GKFD  239 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~-~~~~~~~~~~~~g----------~~~v~~~~~~~~~~~~~-~~~d  239 (307)
                      ..-++|||+|+  +-|..+-.+++..+. +|..+ .+.+-.+.+++.-          .-.++..+...+..... +.||
T Consensus        79 ~~pk~VLiiGg--G~G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~Da~~~l~~~~~~~yD  156 (290)
T d1xj5a_          79 PNPKKVLVIGG--GDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYD  156 (290)
T ss_dssp             SCCCEEEEETC--SSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEE
T ss_pred             CCCcceEEecC--CchHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEccHHHHHhhccccCcc
Confidence            44579999994  446667777887776 66665 3333333333321          12334333334444433 4799


Q ss_pred             EEEE-CCC---------ChhhHHHHHhcccCCcEEEEecc
Q 021831          240 AVLD-TIG---------APETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       240 vvid-~~g---------~~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      +||- ...         +.+.+..+.++|+++|.++.-..
T Consensus       157 vIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~~  196 (290)
T d1xj5a_         157 AVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAE  196 (290)
T ss_dssp             EEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEecC
Confidence            7764 332         13356788899999999998654

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=83.50  E-value=0.51  Score=34.46  Aligned_cols=96  Identities=17%  Similarity=0.142  Sum_probs=55.2

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCCccHHH--HHH------cCCceEEeCCChhHHHHhcCCccEEE
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSIDR--VLA------AGAEQAVDYSSKDIELAIKGKFDAVL  242 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~~~~~~~~~--~~~------~g~~~v~~~~~~~~~~~~~~~~dvvi  242 (307)
                      ..+.+|.|+|+ |.+|..++..+...+.  ++......++...  +..      +....+.... .+. +.+ .+.|+|+
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~-~d~-~~l-~daDvvv   79 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-GDY-DDC-RDADLVV   79 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-CCG-GGT-TTCSEEE
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEE-CCH-HHh-ccceeEE
Confidence            45679999996 9999998888887775  5666554433211  111      1111111111 111 111 4689999


Q ss_pred             ECCCChh---------------h---HHHHHhcccCCcEEEEeccCcc
Q 021831          243 DTIGAPE---------------T---ERLGLNFLKRGGHYMTLHGETA  272 (307)
Q Consensus       243 d~~g~~~---------------~---~~~~~~~l~~~G~~v~~g~~~~  272 (307)
                      -+.|.+.               .   +...+....|.+.++.+..|-.
T Consensus        80 itag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvtNPvd  127 (148)
T d1ldna1          80 ICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVD  127 (148)
T ss_dssp             ECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHH
T ss_pred             EecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEecCccH
Confidence            9988521               1   1122233468899999888743

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=83.10  E-value=0.88  Score=33.28  Aligned_cols=34  Identities=24%  Similarity=0.431  Sum_probs=27.5

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGS  208 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~~~~  208 (307)
                      .|.+|+|+|| |..|+.+++.++.++.  +|+.+.+.
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~   36 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPN   36 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECC
Confidence            4789999996 9999999999988774  77776433

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.02  E-value=0.76  Score=37.11  Aligned_cols=32  Identities=22%  Similarity=0.425  Sum_probs=28.0

Q ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEE
Q 021831          173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT  205 (307)
Q Consensus       173 ~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~  205 (307)
                      ++..+|+|+|| |..||.++..+...|.+|.+.
T Consensus         3 ~~~~kViVIGa-G~aGL~aA~~L~~~G~~V~Vl   34 (449)
T d2dw4a2           3 KKTGKVIIIGS-GVSGLAAARQLQSFGMDVTLL   34 (449)
T ss_dssp             SCCCEEEEECC-BHHHHHHHHHHHHTTCEEEEE
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhCCCCEEEE
Confidence            45567999995 999999999999999998877

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=82.80  E-value=0.88  Score=35.99  Aligned_cols=30  Identities=30%  Similarity=0.589  Sum_probs=25.4

Q ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCC-EEEEE
Q 021831          175 GQRLLVLGGGGAVGFAAVQFSVASGC-HVSAT  205 (307)
Q Consensus       175 g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~  205 (307)
                      ..+|+|.|+ |++|..++..+-..|. ++..+
T Consensus        30 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lv   60 (247)
T d1jw9b_          30 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLL   60 (247)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEE
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEE
Confidence            578999995 9999999999999999 55554

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=82.76  E-value=0.51  Score=35.13  Aligned_cols=29  Identities=28%  Similarity=0.476  Sum_probs=25.6

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEe
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATC  206 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~  206 (307)
                      -|+|+|| |+.|+.++..+.+.|.+|..+-
T Consensus         3 DViIIGg-GpaGl~AAi~aar~G~~v~iie   31 (184)
T d1fl2a1           3 DVLIVGS-GPAGAAAAIYSARKGIRTGLMG   31 (184)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTCCEEEEC
T ss_pred             cEEEECc-CHHHHHHHHHHHHcCCeEEEEE
Confidence            3889995 9999999999999999888774

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=82.38  E-value=8.4  Score=31.24  Aligned_cols=55  Identities=22%  Similarity=0.230  Sum_probs=38.7

Q ss_pred             HcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeC-Cc---cHHHHHHcCCceEE
Q 021831          169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SK---SIDRVLAAGAEQAV  223 (307)
Q Consensus       169 ~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~-~~---~~~~~~~~g~~~v~  223 (307)
                      ...++++...+|...+|..|++++.+++.+|.+++.+.. ..   +.+..+.+|++-+.
T Consensus        58 ~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~  116 (320)
T d1z7wa1          58 KGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVL  116 (320)
T ss_dssp             TTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred             cCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhccCcceEE
Confidence            445666666677777899999999999999996655532 22   24557778876443

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=82.35  E-value=1.1  Score=31.13  Aligned_cols=36  Identities=19%  Similarity=0.385  Sum_probs=30.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~  210 (307)
                      .+.+++|.|| |.+|+-+++.+..+|.+|..+.+.+.
T Consensus        31 ~~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          31 NSGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             HHSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             cCCcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            4578999996 99999999999999999988866544

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.35  E-value=0.45  Score=38.32  Aligned_cols=30  Identities=17%  Similarity=0.244  Sum_probs=26.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeC
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCG  207 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~  207 (307)
                      .|+|+|| |+.|++++..++..|.+|..+-+
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~   33 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILER   33 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeC
Confidence            5999996 99999999999999998888743

>d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Homoserine dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.33  E-value=2.4  Score=31.34  Aligned_cols=92  Identities=18%  Similarity=0.168  Sum_probs=55.5

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcC--C--EEEEEeCCccH-------------HHHHHcCCceEEeCCChhHHHHhc--CC
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASG--C--HVSATCGSKSI-------------DRVLAAGAEQAVDYSSKDIELAIK--GK  237 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G--~--~Vi~~~~~~~~-------------~~~~~~g~~~v~~~~~~~~~~~~~--~~  237 (307)
                      +|.|.| .|.+|...+++.....  .  ++.++.++.+.             .....+.....-......+.+.+.  ..
T Consensus         6 ~I~l~G-~G~VG~~l~~~l~~~~~~l~~~v~~i~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (168)
T d1ebfa1           6 NVAVIG-AGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAHLKTSPK   84 (168)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHHTCCCBCCCHHHHHHHHTTCSS
T ss_pred             EEEEEe-CCHHHHHHHHHHHHhHHHhhhheEEEEEeeeeeecccccchHhhhhhhhhhhhcccccccHHHHHHHhccCCC
Confidence            578888 7999999988776532  3  66666543321             001111111111111123333333  35


Q ss_pred             ccEEEECCCChhhHHHHHhcccCCcEEEEecc
Q 021831          238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLHG  269 (307)
Q Consensus       238 ~dvvid~~g~~~~~~~~~~~l~~~G~~v~~g~  269 (307)
                      .++++|++++.........+|+.|=++|+.-.
T Consensus        85 ~~vivd~t~~~~~~~~~~~aL~~G~hVVTANK  116 (168)
T d1ebfa1          85 PVILVDNTSSAYIAGFYTKFVENGISIATPNK  116 (168)
T ss_dssp             CEEEEECSCCHHHHTTHHHHHHTTCEEECCCC
T ss_pred             ceEEEEecCChHHHHHHHHHHHcCCeEEecCc
Confidence            78999999998777777778888889988765

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=82.26  E-value=6  Score=32.29  Aligned_cols=106  Identities=13%  Similarity=0.155  Sum_probs=62.9

Q ss_pred             HHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC-c---cHHHHHHcCCceEEeCCChh--------
Q 021831          162 AWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-K---SIDRVLAAGAEQAVDYSSKD--------  229 (307)
Q Consensus       162 a~~~l~~~~~~~~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~-~---~~~~~~~~g~~~v~~~~~~~--------  229 (307)
                      |++.+.....-.+..+|+... +|..|.+++..++..|.+++.+... .   +...++.+|++-+......+        
T Consensus        62 a~~~i~~~~~~~~~~~vv~as-sGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~~~~  140 (331)
T d1tdja1          62 AYAMMAGLTEEQKAHGVITAS-AGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIE  140 (331)
T ss_dssp             HHHHHHTTTTSSCSSSCEEEE-CSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCeeeecc-cchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEEcCcccccchhhhhh
Confidence            444554333334455555555 6999999999999999976666432 2   23456778876443221110        


Q ss_pred             -----------------HH-------HH-hc--CCccEEEECCCChh---hHHHHHhcccCCcEEEEec
Q 021831          230 -----------------IE-------LA-IK--GKFDAVLDTIGAPE---TERLGLNFLKRGGHYMTLH  268 (307)
Q Consensus       230 -----------------~~-------~~-~~--~~~dvvid~~g~~~---~~~~~~~~l~~~G~~v~~g  268 (307)
                                       ..       .. +.  +.+|.||-++|+-.   .+...++.+.+.-+++.+-
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve  209 (331)
T d1tdja1         141 LSQQQGFTWVPPFDHPMVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVE  209 (331)
T ss_dssp             HHHHHCCEECCSSCCHHHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             hhhcCCCccccccCChHHhhhhhhHHHHHHHhcCCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEec
Confidence                             00       00 00  46899999988753   3345555666777877764

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=82.09  E-value=1.1  Score=37.19  Aligned_cols=72  Identities=19%  Similarity=0.248  Sum_probs=42.1

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCC--EEEEEeC---CccHHHHHHcC---CceE-EeCCChhHHHHhcCCccEEEECCC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGC--HVSATCG---SKSIDRVLAAG---AEQA-VDYSSKDIELAIKGKFDAVLDTIG  246 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~--~Vi~~~~---~~~~~~~~~~g---~~~v-~~~~~~~~~~~~~~~~dvvid~~g  246 (307)
                      .+|||+||+|-+|...+..+...|.  +|++...   .........+-   ...+ .|..+.+....+..++|.|+..+.
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~a~   82 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAA   82 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhhhh
Confidence            5799999999999999998887776  4555432   12222222221   1111 233333333334456888888765


Q ss_pred             C
Q 021831          247 A  247 (307)
Q Consensus       247 ~  247 (307)
                      .
T Consensus        83 ~   83 (346)
T d1oc2a_          83 E   83 (346)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=82.07  E-value=1.1  Score=37.61  Aligned_cols=71  Identities=18%  Similarity=0.255  Sum_probs=42.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCC---ccHHHHHHcC---CceEE--eCCCh-hHHHHhcC-CccEEEECC
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCH-VSATCGS---KSIDRVLAAG---AEQAV--DYSSK-DIELAIKG-KFDAVLDTI  245 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~-Vi~~~~~---~~~~~~~~~g---~~~v~--~~~~~-~~~~~~~~-~~dvvid~~  245 (307)
                      +|||+||+|-+|...+..+...|.. |+++.+.   .+......+.   .-..+  |..+. .+...+.. .+|+||.++
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~VihlA   81 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLA   81 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEECc
Confidence            6999999999999999999888985 5555432   1122222221   11122  33333 23333333 689999997


Q ss_pred             CC
Q 021831          246 GA  247 (307)
Q Consensus       246 g~  247 (307)
                      +.
T Consensus        82 a~   83 (361)
T d1kewa_          82 AE   83 (361)
T ss_dssp             SC
T ss_pred             cc
Confidence            63

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=81.89  E-value=2  Score=30.91  Aligned_cols=32  Identities=19%  Similarity=0.209  Sum_probs=26.3

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCc
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK  209 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~  209 (307)
                      +|-|+| .|.+|...+.-++..|..+++..+..
T Consensus         2 kIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~   33 (152)
T d1i36a2           2 RVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGR   33 (152)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCEEEECCTTC
T ss_pred             EEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCch
Confidence            578898 69999999999999999887775443

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=81.83  E-value=0.7  Score=34.23  Aligned_cols=29  Identities=21%  Similarity=0.281  Sum_probs=25.0

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEE
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVS  203 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi  203 (307)
                      .+++|+|+|+ |.+|+-++..++.+|.++.
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~   30 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGN   30 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceE
Confidence            5789999995 9999999999999998543

>d2ax3a2 c.104.1.1 (A:1-211) Hypothetical protein TM0922, N-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: YjeF N-terminal domain-like
superfamily: YjeF N-terminal domain-like
family: YjeF N-terminal domain-like
domain: Hypothetical protein TM0922, N-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=81.82  E-value=1.9  Score=33.20  Aligned_cols=110  Identities=20%  Similarity=0.203  Sum_probs=60.2

Q ss_pred             hHHHHHHHHHHHcCCCCCCEEEEEcCC---chHHHHHHHHHHHcCCEEEEEeC-Cc-cH------HHHHHcCCceEEeCC
Q 021831          158 AALTAWRALKCAARMSEGQRLLVLGGG---GAVGFAAVQFSVASGCHVSATCG-SK-SI------DRVLAAGAEQAVDYS  226 (307)
Q Consensus       158 ~~~ta~~~l~~~~~~~~g~~VlI~Ga~---g~~G~~~~~~a~~~G~~Vi~~~~-~~-~~------~~~~~~g~~~v~~~~  226 (307)
                      ++..+++.+.+...-....+|+|.-+.   |+=|++++..++.+|.+|..... .+ ..      ...++++...+ +..
T Consensus        23 Ag~~~a~~i~~~~~~~~~~~vlvl~G~GNNGGDGl~~Ar~L~~~g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  101 (211)
T d2ax3a2          23 AGISVVLAMEEELGNLSDYRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYGLYKKFGGKVV-EQF  101 (211)
T ss_dssp             HHHHHHHHHHHHHSCCTTCEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHHHHHHTTCCEE-SCC
T ss_pred             HHHHHHHHHHHhcccccCCcEEEEECCCCCchhHHHHHHHHHhcCCeeEEEecCccCCcHHHHHHHHHHHcCCccc-ccc
Confidence            344445555444432334566665334   56678888888889998876633 22 11      12344554433 222


Q ss_pred             ChhHHHHhcCCccEEEECCCC-------hhhHHHHHhcccC-CcEEEEeccCcc
Q 021831          227 SKDIELAIKGKFDAVLDTIGA-------PETERLGLNFLKR-GGHYMTLHGETA  272 (307)
Q Consensus       227 ~~~~~~~~~~~~dvvid~~g~-------~~~~~~~~~~l~~-~G~~v~~g~~~~  272 (307)
                      ...    ....+|++||+.-+       ...+..+++.++. ...++.+=-|++
T Consensus       102 ~~~----~~~~~dlIIDal~G~Gl~~~l~~~~~~~i~~iN~~~~~vlsiDiPSG  151 (211)
T d2ax3a2         102 EPS----ILNEFDVVVDAIFGTGLRGEITGEYAEIINLVNKSGKVVVSVDVPSG  151 (211)
T ss_dssp             CGG----GGGGCSEEEEESCCTTCCSCCCHHHHHHHHHHHHSCCEEEEESSCTT
T ss_pred             ccc----cccCceEEEEecccCCccccchHHHHHHHHHHHhhccceeeeccCcc
Confidence            211    11358999999632       2245666666654 445667766655

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=81.81  E-value=0.35  Score=36.53  Aligned_cols=32  Identities=22%  Similarity=0.489  Sum_probs=27.6

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEe
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC  206 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~  206 (307)
                      ++..|+|+|+ |+.|+.++..+.+.|.+|+.+-
T Consensus         4 k~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie   35 (190)
T d1trba1           4 KHSKLLILGS-GPAGYTAAVYAARANLQPVLIT   35 (190)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHTTTCCCEEEC
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEE
Confidence            4567999995 9999999999999999887774

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=81.79  E-value=2.8  Score=30.93  Aligned_cols=34  Identities=18%  Similarity=0.135  Sum_probs=27.9

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~  210 (307)
                      .+|-++| .|.+|...+.-+...|.+|++..++.+
T Consensus         3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~   36 (176)
T d2pgda2           3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVS   36 (176)
T ss_dssp             BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred             CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence            4588999 699999988888888999988866544

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=81.76  E-value=0.26  Score=37.83  Aligned_cols=79  Identities=18%  Similarity=0.090  Sum_probs=47.7

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCccH-HHHHHcCCc------eEEeCC---ChhHHHHhcCCccEEEECC
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAE------QAVDYS---SKDIELAIKGKFDAVLDTI  245 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~~-~~~~~~g~~------~v~~~~---~~~~~~~~~~~~dvvid~~  245 (307)
                      .+|.|+|+ |..|.+.+.++...|-+|....+.++. +.+.+-+..      ..+..+   ..++.+.+ .+.|++|-++
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~-~~ad~iiiav   85 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAY-NGAEIILFVI   85 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHH-TTCSCEEECS
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhcc-CCCCEEEEcC
Confidence            36999995 999999998888877788877665432 223222211      001000   02344443 4579999999


Q ss_pred             CChhhHHHHHhc
Q 021831          246 GAPETERLGLNF  257 (307)
Q Consensus       246 g~~~~~~~~~~~  257 (307)
                      +.. .+...++.
T Consensus        86 Ps~-~~~~~~~~   96 (189)
T d1n1ea2          86 PTQ-FLRGFFEK   96 (189)
T ss_dssp             CHH-HHHHHHHH
T ss_pred             cHH-HHHHHHHH
Confidence            876 55554443

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=81.57  E-value=4.6  Score=29.17  Aligned_cols=87  Identities=11%  Similarity=0.071  Sum_probs=55.3

Q ss_pred             EEEEEcCCchHHHH-HHHHHHHc-CCEEEEEeCCc--c-HHHHHHcCCceEEeCCChhHHHHhcCCccEEEECCCChhhH
Q 021831          177 RLLVLGGGGAVGFA-AVQFSVAS-GCHVSATCGSK--S-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE  251 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~-~~~~a~~~-G~~Vi~~~~~~--~-~~~~~~~g~~~v~~~~~~~~~~~~~~~~dvvid~~g~~~~~  251 (307)
                      +|.|+| .|.+|.- .....+.. +++++++++..  + ....++++...   ++  ++.+.+ ..+|+|+-++......
T Consensus         3 ri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~---~~--~~~~l~-~~~D~V~I~tp~~~h~   75 (164)
T d1tlta1           3 RIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY---AD--SLSSLA-ASCDAVFVHSSTASHF   75 (164)
T ss_dssp             EEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB---CS--SHHHHH-TTCSEEEECSCTTHHH
T ss_pred             EEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc---cc--cchhhh-hhcccccccccchhcc
Confidence            588999 5888864 45555544 67888885432  2 23356666542   22  222222 4589999999888677


Q ss_pred             HHHHhcccCCcEEEEeccCc
Q 021831          252 RLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       252 ~~~~~~l~~~G~~v~~g~~~  271 (307)
                      ..+..+|+.| +=|++-.|-
T Consensus        76 ~~~~~al~~g-k~V~~EKPl   94 (164)
T d1tlta1          76 DVVSTLLNAG-VHVCVDKPL   94 (164)
T ss_dssp             HHHHHHHHTT-CEEEEESSS
T ss_pred             cccccccccc-ceeeccccc
Confidence            7777777665 556666664

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.48  E-value=0.77  Score=38.01  Aligned_cols=31  Identities=26%  Similarity=0.362  Sum_probs=28.4

Q ss_pred             CEEEEEcCCchHHHHHHHHHHHcCCEEEEEe
Q 021831          176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATC  206 (307)
Q Consensus       176 ~~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~  206 (307)
                      ++|||+||+|-+|...+..+...|.+|+++.
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEE
Confidence            6899999999999999999999999998874

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=81.17  E-value=1.3  Score=34.32  Aligned_cols=91  Identities=15%  Similarity=0.178  Sum_probs=57.7

Q ss_pred             EEEEEcCCchHHHH-HHHHHHH-cCCEEEEEeCCcc---HHHHHHcCCc--eEEeCCChhHHHHhc-CCccEEEECCCCh
Q 021831          177 RLLVLGGGGAVGFA-AVQFSVA-SGCHVSATCGSKS---IDRVLAAGAE--QAVDYSSKDIELAIK-GKFDAVLDTIGAP  248 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~-~~~~a~~-~G~~Vi~~~~~~~---~~~~~~~g~~--~v~~~~~~~~~~~~~-~~~dvvid~~g~~  248 (307)
                      +|.|+| .|.+|.- .+...+. .+++++++++...   ....++++..  .+..++  ++.+.+. ..+|+|+-++...
T Consensus        35 riaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~--d~~ell~~~~iD~V~I~tp~~  111 (221)
T d1h6da1          35 GYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYS--NFDKIAKDPKIDAVYIILPNS  111 (221)
T ss_dssp             EEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSS--SGGGGGGCTTCCEEEECSCGG
T ss_pred             EEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccC--chhhhcccccceeeeeccchh
Confidence            678999 5888863 4444333 3678888865432   2335666653  333333  2344444 4799999999988


Q ss_pred             hhHHHHHhcccCCcEEEEeccCc
Q 021831          249 ETERLGLNFLKRGGHYMTLHGET  271 (307)
Q Consensus       249 ~~~~~~~~~l~~~G~~v~~g~~~  271 (307)
                      .....+..+|+. |+=|.+-.|-
T Consensus       112 ~H~~~~~~al~~-gk~v~~EKPl  133 (221)
T d1h6da1         112 LHAEFAIRAFKA-GKHVMCEKPM  133 (221)
T ss_dssp             GHHHHHHHHHHT-TCEEEECSSC
T ss_pred             hhhhHHHHhhhc-chhhhcCCCc
Confidence            777778787765 4666666663

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=81.12  E-value=1.3  Score=32.25  Aligned_cols=34  Identities=21%  Similarity=0.324  Sum_probs=27.7

Q ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCC
Q 021831          174 EGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS  208 (307)
Q Consensus       174 ~g~~VlI~Ga~g~~G~~~~~~a~~~G~-~Vi~~~~~  208 (307)
                      -+++|+|+|+ |.++.=++..+.++|+ .|+.+.+.
T Consensus        44 ~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          44 IRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             CCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeC
Confidence            4678999995 9999999999999999 56666554

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=80.48  E-value=0.83  Score=34.95  Aligned_cols=31  Identities=19%  Similarity=0.404  Sum_probs=26.7

Q ss_pred             EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 021831          177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (307)
Q Consensus       177 ~VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~  208 (307)
                      -|+|+|+ |+.|+.++..+.++|.+|..+-..
T Consensus         5 DvvVIGg-GpaGl~aA~~aa~~G~kV~vie~~   35 (221)
T d1dxla1           5 DVVIIGG-GPGGYVAAIKAAQLGFKTTCIEKR   35 (221)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCCEEEEECS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence            3789995 999999999999999999888543

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=80.34  E-value=0.87  Score=35.58  Aligned_cols=30  Identities=27%  Similarity=0.421  Sum_probs=25.9

Q ss_pred             EEEEcCCchHHHHHHHHHHHcCCEEEEEeCC
Q 021831          178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGS  208 (307)
Q Consensus       178 VlI~Ga~g~~G~~~~~~a~~~G~~Vi~~~~~  208 (307)
                      |+|+|| |+.|+.++..+.+.|.+|+.+-..
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~   34 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKG   34 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            889996 999999998888899999988543

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=80.28  E-value=2.1  Score=30.87  Aligned_cols=47  Identities=15%  Similarity=0.203  Sum_probs=37.1

Q ss_pred             HHHHHHHHHcCCCCCCEEEEE--cCCchHHHHHHHHHHHcCCEEEEEeCCcc
Q 021831          161 TAWRALKCAARMSEGQRLLVL--GGGGAVGFAAVQFSVASGCHVSATCGSKS  210 (307)
Q Consensus       161 ta~~~l~~~~~~~~g~~VlI~--Ga~g~~G~~~~~~a~~~G~~Vi~~~~~~~  210 (307)
                      |.+..+  ..+..++..++|+  | +|-+|+-+++++..+|++|..+.+...
T Consensus        27 t~~d~l--~~~~~~~~~vvi~d~g-gg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          27 TPEQVM--DGKKKIGKRVVILNAD-TYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CHHHHH--HTCSCCCSEEEEEECC-CSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CHHHHh--cCccccCCceEEEecC-CChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            455555  3566788888887  5 489999999999999999998876554