Query 021833
Match_columns 307
No_of_seqs 158 out of 1056
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 09:59:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021833.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021833hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1l5a_A Amide synthase, VIBH; n 99.9 9.2E-21 3.1E-25 179.2 24.4 259 9-295 1-285 (436)
2 4hvm_A Tlmii; PSI-biology, mid 99.9 1.7E-21 5.8E-26 187.6 16.8 268 5-295 12-306 (493)
3 2jgp_A Tyrocidine synthetase 3 99.9 2.2E-20 7.6E-25 181.0 21.2 264 5-295 95-381 (520)
4 2vsq_A Surfactin synthetase su 99.9 3.3E-21 1.1E-25 205.6 14.5 265 6-295 12-308 (1304)
5 2xhg_A Tyrocidine synthetase A 99.8 8.9E-20 3.1E-24 173.9 16.2 267 6-295 17-316 (466)
6 1q9j_A PAPA5, polyketide synth 99.8 6.6E-20 2.2E-24 172.3 14.0 238 4-276 5-271 (422)
7 3fot_A 15-O-acetyltransferase; 99.1 6.5E-08 2.2E-12 93.5 25.2 260 21-300 51-368 (519)
8 2xr7_A Malonyltransferase; xen 98.1 0.00044 1.5E-08 65.4 20.8 265 7-293 22-330 (453)
9 2bgh_A Vinorine synthase; VS, 98.1 0.00022 7.7E-09 66.9 18.4 238 6-289 25-298 (421)
10 4g22_A Hydroxycinnamoyl-COA sh 98.1 6.1E-05 2.1E-09 71.1 14.4 130 6-143 26-175 (439)
11 2e1v_A Acyl transferase; BAHD 97.5 0.0058 2E-07 57.7 17.8 241 7-276 27-307 (454)
12 2rkv_A Trichothecene 3-O-acety 97.1 0.084 2.9E-06 49.5 21.3 132 7-143 5-173 (451)
13 1baz_A ARC repressor; transcri 65.0 9.6 0.00033 24.2 4.2 27 220-247 19-45 (53)
14 3qoq_A Alginate and motility r 64.7 9.2 0.00031 25.9 4.2 34 214-248 25-58 (69)
15 1nla_A Transcriptional repress 56.2 14 0.00049 24.5 3.9 30 220-250 19-48 (64)
16 2i9d_A Chloramphenicol acetylt 51.6 16 0.00055 30.5 4.5 61 212-273 30-95 (217)
17 2k9i_A Plasmid PRN1, complete 49.5 24 0.0008 21.9 4.1 37 213-254 14-50 (55)
18 1p94_A Plasmid partition prote 49.1 19 0.00067 24.7 3.8 37 213-254 39-75 (76)
19 1q23_A Chloramphenicol acetylt 48.3 14 0.00048 30.9 3.6 61 212-273 33-97 (219)
20 3cla_A Type III chloramphenico 45.6 15 0.00051 30.5 3.4 61 212-273 28-92 (213)
21 2an7_A Protein PARD; bacterial 45.3 9.6 0.00033 26.5 1.7 24 220-244 13-36 (83)
22 3cla_A Type III chloramphenico 42.9 12 0.00042 31.0 2.4 22 121-142 184-205 (213)
23 2i9d_A Chloramphenicol acetylt 40.6 14 0.00049 30.8 2.4 22 121-142 192-213 (217)
24 1q23_A Chloramphenicol acetylt 40.4 14 0.00049 30.8 2.4 23 121-143 188-210 (219)
25 3rqc_A Probable lipoamide acyl 35.4 48 0.0016 27.6 4.9 61 212-273 32-102 (224)
26 1u9p_A PARC; unknown function; 35.1 39 0.0013 25.4 3.8 31 216-247 26-56 (120)
27 2kel_A SVTR protein, uncharact 34.6 60 0.0021 20.7 4.2 35 215-254 20-54 (56)
28 2cpg_A REPA protein, transcrip 33.3 44 0.0015 19.6 3.3 36 213-253 7-42 (45)
29 3rqc_A Probable lipoamide acyl 33.0 19 0.00065 30.1 2.0 28 121-148 190-217 (224)
30 2gpe_A Bifunctional protein PU 32.9 84 0.0029 19.1 4.7 37 213-254 8-44 (52)
31 2bsq_E FITA, trafficking prote 31.1 66 0.0022 22.1 4.2 28 220-248 13-40 (77)
32 1dpb_A Dihydrolipoyl-transacet 30.2 26 0.00089 29.7 2.4 23 121-143 211-233 (243)
33 1scz_A E2, dihydrolipoamide su 30.2 26 0.00089 29.5 2.4 23 121-143 199-221 (233)
34 2hue_C Histone H4; mini beta s 30.1 70 0.0024 22.1 4.3 36 217-253 10-46 (84)
35 3b8k_A PDCE2;, dihydrolipoylly 27.2 23 0.00077 29.9 1.5 23 121-143 207-229 (239)
36 1y9b_A Conserved hypothetical 27.2 1E+02 0.0034 21.7 4.7 38 216-254 13-51 (90)
37 2ii3_A Lipoamide acyltransfera 27.1 31 0.0011 29.6 2.4 23 121-143 227-249 (262)
38 1id3_B Histone H4; nucleosome 26.0 86 0.0029 22.6 4.3 38 215-253 26-64 (102)
39 1taf_B TFIID TBP associated fa 25.8 1.3E+02 0.0043 20.2 4.8 37 216-253 5-42 (70)
40 1mnt_A MNT repressor; transcri 25.3 50 0.0017 22.5 2.7 27 220-247 16-42 (76)
41 1scz_A E2, dihydrolipoamide su 24.9 76 0.0026 26.5 4.4 61 212-273 30-103 (233)
42 3l60_A Branched-chain alpha-ke 24.2 69 0.0024 27.2 4.0 41 212-252 40-84 (250)
43 2ay0_A Bifunctional PUTA prote 23.8 1.2E+02 0.0042 19.2 4.3 36 214-254 9-44 (58)
44 2ii3_A Lipoamide acyltransfera 23.0 85 0.0029 26.8 4.4 39 213-252 57-104 (262)
45 3t76_A VANU, transcriptional r 22.7 40 0.0014 23.5 1.9 21 218-239 63-83 (88)
46 3b8k_A PDCE2;, dihydrolipoylly 22.7 65 0.0022 27.0 3.6 59 214-273 40-109 (239)
47 3kk4_A Uncharacterized protein 20.8 1.5E+02 0.0052 22.3 4.8 29 213-242 32-60 (125)
No 1
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=99.88 E-value=9.2e-21 Score=179.23 Aligned_cols=259 Identities=11% Similarity=-0.069 Sum_probs=165.4
Q ss_pred CCccccccc-----ccCcceEEE-EEEEeCCCCChHHHHHHHHHHhhhcCccccceeeeCCCCCceeeecccCccCcee-
Q 021833 9 LTPAGRLFL-----QPHMNTIIH-CVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRETSVDIDRHFV- 81 (307)
Q Consensus 9 Ls~~d~~~l-----~~~~~~~i~-~v~~~~g~~d~~~l~~~l~~~~~~~~p~lr~r~~~~~~g~p~W~~~~~d~~~hv~- 81 (307)
||+.|+.+| .|+...|++ ..+.++|++|.+.|++++...+. +||.||++++.. .| ++.+..++..++.
T Consensus 1 Ls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~ld~~~L~~A~~~lv~-rh~~LRt~f~~~-~~---~v~~~~~~~~~~~d 75 (436)
T 1l5a_A 1 MLLAQKPFWQRHLAYPHINLDTVAHSLRLTGPLDTTLLLRALHLTVS-EIDLFRARFSAQ-GE---LYWHPFSPPIDYQD 75 (436)
T ss_dssp CCGGGHHHHHHHHHSTTSCCSEEEEEEEEESSCCHHHHHHHHHHHHH-TCGGGGEEECTT-CC---EEECSSCCCCEEEE
T ss_pred CCHHHHHHHHHHHcCCCCCccceeEEEEEeCCCCHHHHHHHHHHHHH-HhheeEEEEEec-CC---eECCCcCCCccEEe
Confidence 677766544 366666665 47889999999999999999999 999999999875 44 4433223332322
Q ss_pred ee---CCchHHHHHHHHhhCCCCCCCCC-CCeEEEEEe--CCcEE-EEEeeccccccchHHHHHHHhccccCC---CCCC
Q 021833 82 EV---HDSTSVNDYVAGLSFSSPLSEDK-PLWEVHVLA--EHRCA-VFRIHHALGDGISLVSMLLAGCRLADD---PEAL 151 (307)
Q Consensus 82 ~~---~~~~~l~~~v~~~~~~~pld~~r-PlW~~~li~--~~~~a-~~k~HHal~DG~s~~~ll~~l~~~~~~---~~~~ 151 (307)
+. ..++++.+++.+...+ |||..+ |+|++.+++ ++++. ++.+||+++||+|+..++.++...|.. ....
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~-~fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~ 154 (436)
T 1l5a_A 76 LSIHLEAEPLAWRQIEQDLQR-SSTLIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTP 154 (436)
T ss_dssp CTTCTTHHHHHHHHHHHHHTS-CCCCBTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CCCCCCHHHHHHHHHHHHhcC-CCCcCCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCC
Confidence 22 2245688999999999 999976 999999998 67777 999999999999999999998876531 1111
Q ss_pred CCCCCCCCCCCC---Cc--hhhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCccccCCCC-CCC--CeEEEEeecChHHH
Q 021833 152 PAVAGGKRTESA---GK--IGSLWGLLKMVLLSIVFVLEFLLRALWVSDRKTAISGGAGV-ELW--PRKLATATFSIDDM 223 (307)
Q Consensus 152 p~~p~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~-~~~--~r~~~~~~~~~~~v 223 (307)
+ .+........ .. ...-....+.+|... +....+..++..+... ... ...+.......+++
T Consensus 155 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~----------l~~~~~~~~lp~~~~~~~~~~~~~~~~l~~~~~~~l 223 (436)
T 1l5a_A 155 T-AAFKPYQSYLEEEAAYLTSHRYWQDKQFWQGY----------LREAPDLTLTSATYDPQLSHAVSLSYTLNSQLNHLL 223 (436)
T ss_dssp C-CCCCCHHHHHHHHHHHHTSHHHHHHHHHHHHH----------HHTSCCCCBCCTTCCGGGCCEEEEEEECCHHHHHHH
T ss_pred C-CCccCHHHHHHHHHHhhccHhHHHHHHHHHHH----------hcCCCCcccCCCCCCCCcccceeeEEecCHHHHHHH
Confidence 1 1111110000 00 000011122333211 1111111222111100 001 11233333336689
Q ss_pred HHHHHHcCCCchhhHHHHHHHHHHHHHHhhhCCCCCCCCCceEEEEEeeeecCCC-cchhccCCCCeeEEeec
Q 021833 224 KAVKKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPG-LQERAGGTNLACFCCQF 295 (307)
Q Consensus 224 k~ia~~~~g~TvNDvllA~~a~aL~ryl~~~g~~~~~~~~~l~~~vPvslR~~~~-~~~~~~~~~~~~~~~~~ 295 (307)
+++|+++ |+|++++++|+++.+|++|.. . ++++++|++.|...+ .+.+|...|..-+.+++
T Consensus 224 ~~~a~~~-~~t~~~~l~aa~~~~L~~~~g-~---------dv~ig~~~~~R~~~~~~~~vG~f~n~lplr~~~ 285 (436)
T 1l5a_A 224 LKLANAN-QIGWPDALVALCALYLESAEP-D---------APWLWLPFMNRWGSVAANVPGLMVNSLPLLRLS 285 (436)
T ss_dssp HHHHHHT-TCCHHHHHHHHHHHHHHHHST-T---------CCEEEEEECCCTTSGGGGSCSCCCEEEEEECCC
T ss_pred HHHHHHh-CCCHHHHHHHHHHHHHHHhhC-C---------ceEEeeecccCCChHHhcCcceEEEEEEEEEec
Confidence 9999999 999999999999999999964 3 699999999998655 34556666665555444
No 2
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=99.87 E-value=1.7e-21 Score=187.64 Aligned_cols=268 Identities=13% Similarity=-0.037 Sum_probs=165.8
Q ss_pred CCCcCCccccccc-----ccCcceEEE-EEEEeCCCCChHHHHHHHHHHhhhcCccccceeeeCCCCCceeeecccCccC
Q 021833 5 PDEPLTPAGRLFL-----QPHMNTIIH-CVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRETSVDIDR 78 (307)
Q Consensus 5 ~~~~Ls~~d~~~l-----~~~~~~~i~-~v~~~~g~~d~~~l~~~l~~~~~~~~p~lr~r~~~~~~g~p~W~~~~~d~~~ 78 (307)
...|||+.|+.+| .++.. +++ .++.++|++|.+.|++++...+. +||.||++|+.. .|.|+++.+.. +..
T Consensus 12 ~~~Pls~~Q~~~~~~~~~~~~~~-y~~~~~~~l~g~ld~~~L~~A~~~lv~-rh~~LRt~f~~~-~~~~~~v~~~~-~~~ 87 (493)
T 4hvm_A 12 GLRRASFLQRGAWRWLREAPPAA-AFAARGLLGSGRIDDDRLAAAADEVLD-AFPLLRVNFVDD-DGLWMRTRENA-DAL 87 (493)
T ss_dssp CEEECCHHHHHHHHHHTTSCGGG-GEEEEEEEEESSCCHHHHHHHHHHHHH-HCGGGGEEEEES-SSEEEEECSCC-CCE
T ss_pred CCCCCCHHHHHHHHHHhhCCCCc-ceeEEEEEEeCCCCHHHHHHHHHHHHH-hchhceeEEEcc-CCEEEEecCCC-CCc
Confidence 3478999977654 25555 555 57889999999999999999999 999999999886 57777334333 332
Q ss_pred cee-ee---CCchHHHHHHHHhhCCCCCCCCC-CCeEEEEEe--CCcEE-EEEeeccccccchHHHHHHHhccccCCCCC
Q 021833 79 HFV-EV---HDSTSVNDYVAGLSFSSPLSEDK-PLWEVHVLA--EHRCA-VFRIHHALGDGISLVSMLLAGCRLADDPEA 150 (307)
Q Consensus 79 hv~-~~---~~~~~l~~~v~~~~~~~pld~~r-PlW~~~li~--~~~~a-~~k~HHal~DG~s~~~ll~~l~~~~~~~~~ 150 (307)
++. +. ..++++.+++.+...+ |||..+ |+|++.+++ ++++. ++.+||+++||+|+..++.++...|.. ..
T Consensus 88 ~~~d~~~~~~~~~~~~~~~~~~~~~-~fdl~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~l~~~l~~~Y~g-~~ 165 (493)
T 4hvm_A 88 VRSDLRGHPDPQARCVELLRADRDR-PTDPERDPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYMVLGAVWQAYYG-RF 165 (493)
T ss_dssp EEEECTTSSSHHHHHHHHHHHHHSS-CCCTTTSCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHHHHHHHHHHHTT-CC
T ss_pred eEEECCCCCchHHHHHHHHHHHhcC-CCCCCCCCeEEEEEEEECCCcEEEEEecchhhccHHHHHHHHHHHHHHhCC-CC
Confidence 222 22 1227899999999999 999977 999999999 66667 999999999999999999999887622 11
Q ss_pred CCCCCCCCCCCCCCc----hhhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCccccCCCCCCCCeEEEEeecChHHHHHH
Q 021833 151 LPAVAGGKRTESAGK----IGSLWGLLKMVLLSIVFVLEFLLRALWVSDRKTAISGGAGVELWPRKLATATFSIDDMKAV 226 (307)
Q Consensus 151 ~p~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~r~~~~~~~~~~~vk~i 226 (307)
.+ .+......|... ........+.+|... +....+-+....+.. ......+....-..+.++++
T Consensus 166 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~----------l~~~~~l~~~~~~~~-~~~~~~~~l~~~~~~~l~~~ 233 (493)
T 4hvm_A 166 RP-AQYRDFAEVADFHPLDRETVRVARHRWWSRR----------LPALPVRGGDGGPVG-PPETSRLRVPGSRWQALTEP 233 (493)
T ss_dssp CG-GGSBCGGGTTTCCTTCSHHHHHHHHHHHHHH----------GGGSCCCC--------CCEEEEEEEEHHHHHHHHCC
T ss_pred CC-cCHHHHHHHHhhhhcccChhhHHHHHHHHHh----------ccCCCCCCCCCCCCC-CCeeEEEEcCHHHHHHHHHH
Confidence 11 111111111110 011222334455421 111111001111111 00222344555556778889
Q ss_pred HHHcCCCc--hhhHHHHHHHHHHHHHHh------hhCCCCCCCCCceEEEEEeeeecCCC-cchhccCCCCeeEEeec
Q 021833 227 KKAIAGAT--INDVLFGVVSSGLSRYLD------HRSPNALPEGLRITGLAMVNIRRQPG-LQERAGGTNLACFCCQF 295 (307)
Q Consensus 227 a~~~~g~T--vNDvllA~~a~aL~ryl~------~~g~~~~~~~~~l~~~vPvslR~~~~-~~~~~~~~~~~~~~~~~ 295 (307)
|+++ |+| +|++++|+++.+|++|.. ..+ ...+++++++|++.|...+ .+.+|...|..-+.+++
T Consensus 234 a~~~-~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~----~g~~dv~~g~~~~gR~~~~~~~~vG~f~n~lplr~~~ 306 (493)
T 4hvm_A 234 GGPL-GGNGSLAMAALTAWWLWTQGAGTGTDTGAGTG----TGKDSLYLSTEVDLRDHLQLGSVVGPLTDRVVFGVDL 306 (493)
T ss_dssp -------CHHHHHHHHHHHHHHHC--------------------CEEEEEEEEEHHHHTTCCSBCSCCEEEEEEEEEC
T ss_pred HHHc-CCCchHHHHHHHHHHHHHHHhhhcccccccCc----CCCCCEEEEeeccCCCCcchhcCeEeeeceeEEEEec
Confidence 9999 999 999999999999999911 110 0125899999999997654 44566666665555544
No 3
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=99.86 E-value=2.2e-20 Score=180.96 Aligned_cols=264 Identities=14% Similarity=0.118 Sum_probs=170.1
Q ss_pred CCCcCCccccccc-----ccCcceEEE-EEEEeCCCCChHHHHHHHHHHhhhcCccccceeeeCCCCCceee-ecccCcc
Q 021833 5 PDEPLTPAGRLFL-----QPHMNTIIH-CVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWR-ETSVDID 77 (307)
Q Consensus 5 ~~~~Ls~~d~~~l-----~~~~~~~i~-~v~~~~g~~d~~~l~~~l~~~~~~~~p~lr~r~~~~~~g~p~W~-~~~~d~~ 77 (307)
...|||+.++.+| .++...|++ ..+.++|++|.+.|++++...+. +||.||++++.. .|.++|+ .++.++.
T Consensus 95 ~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~ld~~~l~~A~~~lv~-rh~~LRt~f~~~-~~~~~q~v~~~~~~~ 172 (520)
T 2jgp_A 95 AYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEGKLERTRVEAAFQRLIA-RHESLRTSFAVV-NGEPVQNIHEDVPFA 172 (520)
T ss_dssp SSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEECCCHHHHHHHHHHHHH-HCGGGGEEEEEE-TTEEEEEECSCCCCC
T ss_pred CCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECCCCCHHHHHHHHHHHHH-HhHhheeEEEee-CCEEEEEECCCCCCc
Confidence 3468999876544 255555544 47889999999999999999999 999999999875 5778876 3433332
Q ss_pred CceeeeCCchHHHHHHHHhhCCCCCCCCC-CCeEEEEEe--CCcEE-EEEeeccccccchHHHHHHHhccccCCCCCCCC
Q 021833 78 RHFVEVHDSTSVNDYVAGLSFSSPLSEDK-PLWEVHVLA--EHRCA-VFRIHHALGDGISLVSMLLAGCRLADDPEALPA 153 (307)
Q Consensus 78 ~hv~~~~~~~~l~~~v~~~~~~~pld~~r-PlW~~~li~--~~~~a-~~k~HHal~DG~s~~~ll~~l~~~~~~~~~~p~ 153 (307)
..+. .-+++++.+ +.+...+ |||..+ |+|++.+++ ++++. ++.+||+++||+|+..++.++...|.... .+.
T Consensus 173 ~~~~-~~~~~~~~~-~~~~~~~-~fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~el~~~Y~~~~-l~~ 248 (520)
T 2jgp_A 173 LAYS-EVTEEEARE-LVSSLVQ-PFDLEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGILLAEWVQLYQGDV-LPE 248 (520)
T ss_dssp CEEE-ECCHHHHHH-HHHHTCC-CCCTTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHHHHHHHHHHTTCC-CCC
T ss_pred eEEE-eCCHHHHHH-HHHHhcC-CCCCCCCcceeEEEEEEcCCcEEEEEEccceeecHhHHHHHHHHHHHHHccCC-CCC
Confidence 2221 123456666 6677889 999875 999999999 67777 99999999999999999999887764321 111
Q ss_pred CCCCCCCC---CCCc--hhhHHHHHHHHHHHHHHHHHHHHHhcccCCCCC--ccccCCCC-CCCCeEEEEeecC---hHH
Q 021833 154 VAGGKRTE---SAGK--IGSLWGLLKMVLLSIVFVLEFLLRALWVSDRKT--AISGGAGV-ELWPRKLATATFS---IDD 222 (307)
Q Consensus 154 ~p~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--p~~~~~~~-~~~~r~~~~~~~~---~~~ 222 (307)
.+. .... |... ........+.+|.. .+....|.. |...+... ...........++ .+.
T Consensus 249 ~~~-~~~d~~~~~~~~~~~~~~~~~~~yW~~----------~l~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~ 317 (520)
T 2jgp_A 249 LRI-QYKDFAVWQQEFSQSAAFHKQEAYWLQ----------TFADDIPVLNLPTDFTRPSTQSFAGDQCTIGAGKALTEG 317 (520)
T ss_dssp CSC-CHHHHHHHHHHHTTSHHHHHHHHHHHH----------HTSSCCCCCCCCCSSCCCSSCCCBEEEEEEECCHHHHHH
T ss_pred CCC-CHHHHHHHHHHhhcChhhHHHHHHHHH----------HhCCCCCcCCCCCCCCCCCCCCCCccEEEEeCCHHHHHH
Confidence 110 0100 0000 00000111223321 111111212 21111110 0011112233344 668
Q ss_pred HHHHHHHcCCCchhhHHHHHHHHHHHHHHhhhCCCCCCCCCceEEEEEeeeecCCC-cchhccCCCCeeEEeec
Q 021833 223 MKAVKKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPG-LQERAGGTNLACFCCQF 295 (307)
Q Consensus 223 vk~ia~~~~g~TvNDvllA~~a~aL~ryl~~~g~~~~~~~~~l~~~vPvslR~~~~-~~~~~~~~~~~~~~~~~ 295 (307)
++++|+++ |+|++++++|+++.+|++|..+ +++++++|++.|...+ .+.+|...|..-+.+.+
T Consensus 318 l~~~a~~~-~~T~~~~l~aa~a~~L~~~~~~---------~dv~~g~~~~gR~~~~~~~~vG~f~n~lplr~~~ 381 (520)
T 2jgp_A 318 LHQLAQAT-GTTLYMVLLAAYNVLLAKYAGQ---------EDIIVGTPITGRSHADLEPIVGMFVNTLAMRNKP 381 (520)
T ss_dssp HHHHHHHH-TCCHHHHHHHHHHHHHHHHHTC---------SCEEEEEEECCCCSGGGTTCCSCCCEEEEEEECC
T ss_pred HHHHHHHc-CCCHHHHHHHHHHHHHHHhcCC---------CCeEEEeccCCCCchhhhccEEeeeeeeeEEecC
Confidence 99999999 9999999999999999999855 4799999999998755 34566666666555554
No 4
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=99.85 E-value=3.3e-21 Score=205.64 Aligned_cols=265 Identities=13% Similarity=0.069 Sum_probs=173.0
Q ss_pred CCcCCccccccc-----ccCcceEEE-EEEEeCCCCChHHHHHHHHHHhhhcCccccceeeeCCCCCceee-ecccCccC
Q 021833 6 DEPLTPAGRLFL-----QPHMNTIIH-CVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWR-ETSVDIDR 78 (307)
Q Consensus 6 ~~~Ls~~d~~~l-----~~~~~~~i~-~v~~~~g~~d~~~l~~~l~~~~~~~~p~lr~r~~~~~~g~p~W~-~~~~d~~~ 78 (307)
..|||+.|+.+| .++...|++ ..+.++|++|.++|++++...+. +|+.||++|+....+.|+++ .++.++..
T Consensus 12 ~~PLS~~Q~~lw~~~~~~~~~~~Y~~~~~~~l~g~ld~~~l~~A~~~lv~-rH~~LRt~f~~~~~~~p~Q~v~~~~~~~~ 90 (1304)
T 2vsq_A 12 MYYLSPMQEGMLFHAILNPGQSFYLEQITMKVKGSLNIKCLEESMNVIMD-RYDVFRTVFIHEKVKRPVQVVLKKRQFHI 90 (1304)
T ss_dssp EEECCHHHHHHHHHHHHSTTSCTTEEEEEEEEEECCCHHHHHHHHHHHHH-HCGGGGEEEECSSCSSCEEEEESCCCCCE
T ss_pred cCCCCHHHHHHHHHHhhCCCCCceEEEEEEEEcCCcCHHHHHHHHHHHHH-hhhhceEEEEEcCCCeEEEEECCCCCCce
Confidence 368999866654 366666665 47889999999999999999999 99999999987644568875 44333333
Q ss_pred ce-eee-----CCchHHHHHHHHhhCCCCCCCCC-CCeEEEEEe--CCcEE-EEEeeccccccchHHHHHHHhccccCCC
Q 021833 79 HF-VEV-----HDSTSVNDYVAGLSFSSPLSEDK-PLWEVHVLA--EHRCA-VFRIHHALGDGISLVSMLLAGCRLADDP 148 (307)
Q Consensus 79 hv-~~~-----~~~~~l~~~v~~~~~~~pld~~r-PlW~~~li~--~~~~a-~~k~HHal~DG~s~~~ll~~l~~~~~~~ 148 (307)
++ .+. +.++++.+++.+...+ |||..+ |+||+.+++ ++++. ++.+||+++||+|+..++.++...|...
T Consensus 91 ~~~d~~~~~~~~~~~~~~~~~~~~~~~-~fdl~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~ 169 (1304)
T 2vsq_A 91 EEIDLTHLTGSEQTAKINEYKEQDKIR-GFDLTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNAL 169 (1304)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHHHHHH-CCCTTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCchhHHHHHHHHHHHHhcC-CCCCCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHh
Confidence 32 122 1245688899999999 999987 999999999 67787 9999999999999999999988755210
Q ss_pred --CCCCCCCC-CCCCCCCCchhhH----HHHHHHHHHHHHHHHHHHHHhcccCCCCCcccc--CCCCCCCCeE---EEEe
Q 021833 149 --EALPAVAG-GKRTESAGKIGSL----WGLLKMVLLSIVFVLEFLLRALWVSDRKTAISG--GAGVELWPRK---LATA 216 (307)
Q Consensus 149 --~~~p~~p~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~~--~~~~~~~~r~---~~~~ 216 (307)
...+..+. +..... ..+. ....+.+|... +....+.+.+.. .......... +...
T Consensus 170 ~~g~~~~l~~~~~y~d~---~~~~~~~~~~~~~~yW~~~----------L~~~~~~~~lp~~~~~~~~~~~~~~~~~~l~ 236 (1304)
T 2vsq_A 170 REQKPYSLPPVKPYKDY---IKWLEKQDKQASLRYWREY----------LEGFEGQTTFAEQRKKQKDGYEPKELLFSPS 236 (1304)
T ss_dssp HTTCCCCCCCCCCTHHH---HHHHHTSCHHHHHHHHHHH----------HTTCCCCCTTTTTCCCSSCCCCEEEEEECCC
T ss_pred hcCCCCCCCCcccHHHH---HHHHhcchhhHHHHHHHHH----------hCCCCccccCCCCCCccccccCcceEEEecC
Confidence 00111111 111100 0000 11122344321 111111111111 1100001111 2233
Q ss_pred ecChHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHhhhCCCCCCCCCceEEEEEeeeecC--CC-cchhccCCCCeeEEe
Q 021833 217 TFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQ--PG-LQERAGGTNLACFCC 293 (307)
Q Consensus 217 ~~~~~~vk~ia~~~~g~TvNDvllA~~a~aL~ryl~~~g~~~~~~~~~l~~~vPvslR~~--~~-~~~~~~~~~~~~~~~ 293 (307)
.-..++++++|+++ |+|+|++++|+++..|+||..+ +++++++|++.|.. .+ .+.+|...|..-+.+
T Consensus 237 ~~~~~~L~~~a~~~-~~T~~~vllaa~a~~L~r~tg~---------~dvv~G~pvsgR~~~~~~~~~~vG~fvntlplr~ 306 (1304)
T 2vsq_A 237 EAETKAFTELAKSQ-HTTLSTALQAVWSVLISRYQQS---------GDLAFGTVVSGRPAEIKGVEHMVGLFINVVPRRV 306 (1304)
T ss_dssp HHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHTC---------SEEEEEEEECCCCTTSTTGGGCCSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcCC---------CCEEEEEEeCCCCccchhhhcccccceeEEEEEe
Confidence 33367899999999 9999999999999999999755 47999999999986 44 334555566655555
Q ss_pred ec
Q 021833 294 QF 295 (307)
Q Consensus 294 ~~ 295 (307)
.+
T Consensus 307 ~~ 308 (1304)
T 2vsq_A 307 KL 308 (1304)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 5
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=99.83 E-value=8.9e-20 Score=173.88 Aligned_cols=267 Identities=13% Similarity=0.024 Sum_probs=162.4
Q ss_pred CCcCCccccccc---ccCcceEEEE-EEEeCCCCChHHHHHHHHHHhhhcCccccceeeeCCCCCceee-ecccCccCce
Q 021833 6 DEPLTPAGRLFL---QPHMNTIIHC-VVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWR-ETSVDIDRHF 80 (307)
Q Consensus 6 ~~~Ls~~d~~~l---~~~~~~~i~~-v~~~~g~~d~~~l~~~l~~~~~~~~p~lr~r~~~~~~g~p~W~-~~~~d~~~hv 80 (307)
..|||+.++.|+ .++...+++. ++.++|++|.+.|++++...+. +||.||+++... .|.++++ .+..+...++
T Consensus 17 ~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g~ld~~~L~~Al~~lv~-rh~~LRt~f~~~-~~~~~q~v~~~~~~~~~~ 94 (466)
T 2xhg_A 17 NVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPEGFDPKVIQSVMDKIIE-HHDALRMVYQHE-NGNVVQHNRGLGGQLYDF 94 (466)
T ss_dssp ECCCCHHHHHHHHTTCTTTTCBEEEEEEEETTCCCHHHHHHHHHHHHH-HSGGGGEEEECG-GGCCEEEECCSSSCCCEE
T ss_pred CCCCCHHHHHHHhCCCCCcCcceeEEEEEcCCCCCHHHHHHHHHHHHH-hChHhheEEecC-CCceeeecccccccccee
Confidence 368999998333 2555566654 6789999999999999999999 999999999875 5677776 3322333333
Q ss_pred e---ee--CCchHHHHHHHHhhCCCCCCCCC-CCeEEEEEe-CCcE-EEEEeeccccccchHHHHHHHhccccCCC--CC
Q 021833 81 V---EV--HDSTSVNDYVAGLSFSSPLSEDK-PLWEVHVLA-EHRC-AVFRIHHALGDGISLVSMLLAGCRLADDP--EA 150 (307)
Q Consensus 81 ~---~~--~~~~~l~~~v~~~~~~~pld~~r-PlW~~~li~-~~~~-a~~k~HHal~DG~s~~~ll~~l~~~~~~~--~~ 150 (307)
. +. .+.++..+.+.+...+ |||..+ |+|++.+++ ++.. .++.+||+++||+|...++.++...|... ..
T Consensus 95 ~~~d~~~~~~~~~~~~~~~~~~~~-~fdl~~~pl~r~~l~~~~~~~~l~l~~HH~i~Dg~S~~~l~~el~~~Y~~~~~g~ 173 (466)
T 2xhg_A 95 FSYNLTAQPDVQQAIEAETQRLHS-SMNLQEGPLVKVALFQTLHGDHLFLAIHHLVVDGISWRILFEDLATGYAQALAGQ 173 (466)
T ss_dssp EEEECTTCSCHHHHHHHHHHHHHT-TCCTTTCCCEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCCcccHHHHHHHHHHHHHh-ccCCCCCCeEEEEEEEcCCCCEEEEEeeeeeechhhHHHHHHHHHHHHHHHHcCC
Confidence 3 22 2222333334456788 999976 999999999 4443 49999999999999999999887655210 11
Q ss_pred CCCCCCCCCCCCCCchhhH--------HHHHHHHHHHHHHHHHHHHHhcccCCCCCccccCCCC-CCCCeEEEEeecChH
Q 021833 151 LPAVAGGKRTESAGKIGSL--------WGLLKMVLLSIVFVLEFLLRALWVSDRKTAISGGAGV-ELWPRKLATATFSID 221 (307)
Q Consensus 151 ~p~~p~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~-~~~~r~~~~~~~~~~ 221 (307)
.+..+.. ......-..+. ....+.+|... +. .. ..+..|...+... ...........++.+
T Consensus 174 ~~~l~~~-~~~y~~~~~~~~~~~~~~~~~~~~~~W~~~------l~-~~--~~~~lp~~~~~~~~~~~~~~~~~~~l~~~ 243 (466)
T 2xhg_A 174 AISLPEK-TDSFQSWSQWLQEYANEADLLSEIPYWESL------ES-QA--KNVSLPKDYEVTDCKQKSVRNMRIRLHPE 243 (466)
T ss_dssp CCCCCCC-CSCHHHHHHHHHHHTTSHHHHTTHHHHHHH------HH-HC--CCCCCCCSSCCSSCBGGGEEEEEEECCHH
T ss_pred CCCCCCC-CCCHHHHHHHHHHHhcCccchhhhHHHHHh------hc-cC--CcccCCccccccccccccceEEEEEcCHH
Confidence 1111110 00000000000 01112344321 01 11 1111222211110 001112333445554
Q ss_pred ---HHHHHH-HHcCCCchhhHHHHHHHHHHHHHHhhhCCCCCCCCCceEEEEEeeeecCC----C-cchhccCCCCeeEE
Q 021833 222 ---DMKAVK-KAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQP----G-LQERAGGTNLACFC 292 (307)
Q Consensus 222 ---~vk~ia-~~~~g~TvNDvllA~~a~aL~ryl~~~g~~~~~~~~~l~~~vPvslR~~~----~-~~~~~~~~~~~~~~ 292 (307)
.+++.+ +++ |+|++++++|+++.+|++|..+ .++++++|++.|... + .+.+|...|..-+.
T Consensus 244 ~~~~l~~~~~~~~-~~t~~~~llaa~~~~l~~~~~~---------~dv~ig~~~~gR~~~~~~~~~~~~vG~f~n~lplr 313 (466)
T 2xhg_A 244 ETEQLLKHANQAY-QTEINDLLLAALGLAFAEWSKL---------AQIVIHLEGHGREDIIEQANVARTVGWFTSQYPVL 313 (466)
T ss_dssp HHHHHHHTGGGTT-TCCHHHHHHHHHHHHHHHHHCC---------SEEEEEEEECCCCSCSTTCCCTTCCSCCCEEEEEE
T ss_pred HHHHHHHHhHHhh-CCCHHHHHHHHHHHHHHHHhCC---------CceEEEecCCCCCccccCCCccccccceeeeccEE
Confidence 444444 568 9999999999999999999744 479999999999752 2 45667777766555
Q ss_pred eec
Q 021833 293 CQF 295 (307)
Q Consensus 293 ~~~ 295 (307)
+.+
T Consensus 314 ~~~ 316 (466)
T 2xhg_A 314 LDL 316 (466)
T ss_dssp EEC
T ss_pred Eec
Confidence 554
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=99.82 E-value=6.6e-20 Score=172.34 Aligned_cols=238 Identities=13% Similarity=0.097 Sum_probs=145.2
Q ss_pred CCCCcCCcccccccccCcceEEEEEEEeCCCCChHHHHHHHHHHhhhcCccccceeeeCCCCCceee-ecccCcc-Cce-
Q 021833 4 HPDEPLTPAGRLFLQPHMNTIIHCVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWR-ETSVDID-RHF- 80 (307)
Q Consensus 4 ~~~~~Ls~~d~~~l~~~~~~~i~~v~~~~g~~d~~~l~~~l~~~~~~~~p~lr~r~~~~~~g~p~W~-~~~~d~~-~hv- 80 (307)
+...|||+.|+.+|... ..+...+.++|++|.+.|++++...+. +||.||++++.. .+.++++ .+..+.. -.+
T Consensus 5 ~~~~pls~~Q~~~~~~~--y~~~~~~~l~g~ld~~~l~~A~~~lv~-rh~~LRt~f~~~-~~~~~q~v~~~~~~~~~~~~ 80 (422)
T 1q9j_A 5 SVIRKLSHSEEVFAQYE--VFTSMTIQLRGVIDVDALSDAFDALLE-THPVLASHLEQS-SDGGWNLVADDLLHSGICVI 80 (422)
T ss_dssp SEEEECCHHHHHHHHTT--CEEEEEEEEESCCCHHHHHHHHHHHHH-HCGGGSEEEEEC-TTSSEEEEECCSSSCCCEEE
T ss_pred ceeecCCHHHHHHHhcC--ceEEEEEEEecCCCHHHHHHHHHHHHH-hCccceEEEEec-CCcceeeeccCCCCCceEEE
Confidence 34689999988887432 334457889999999999999999999 999999999876 4556443 3433332 111
Q ss_pred eee--CCchHHHHHHHHhhCCCCCCCCCCCeEEEEEe-CCcEE-EEEeeccccccchHHHHHHHhccccC------CCCC
Q 021833 81 VEV--HDSTSVNDYVAGLSFSSPLSEDKPLWEVHVLA-EHRCA-VFRIHHALGDGISLVSMLLAGCRLAD------DPEA 150 (307)
Q Consensus 81 ~~~--~~~~~l~~~v~~~~~~~pld~~rPlW~~~li~-~~~~a-~~k~HHal~DG~s~~~ll~~l~~~~~------~~~~ 150 (307)
.+. ...+++. + ... +||...|+|++.+++ ++++. ++.+||+++||+|+..++.++...|. .+..
T Consensus 81 d~~~~~~~~~~~----~-~~~-~~d~~~pl~r~~l~~~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y~~~~~~~~~~~ 154 (422)
T 1q9j_A 81 DGTAATNGSPSG----N-AEL-RLDQSVSLLHLQLILREGGAELTLYLHHCMADGHHGAVLVDELFSRYTDAVTTGDPGP 154 (422)
T ss_dssp C-----------------CCC-CCCTTTCSEEEEEECCSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHHSSSCCC
T ss_pred ECCCCCcchhhh----c-ccC-ccCCCCCcEEEEEEecCCCeEEEEEeceEEEchhhHHHHHHHHHHHHHHhhccCCCCC
Confidence 122 1122221 2 357 999556999999999 66777 99999999999999999999886552 1111
Q ss_pred CCCCCCCCCCCCCCchhhHHHH--------------HHHHHHHHHHHHHHHHHhcccCCCCCccccCC--CCCCCCeEEE
Q 021833 151 LPAVAGGKRTESAGKIGSLWGL--------------LKMVLLSIVFVLEFLLRALWVSDRKTAISGGA--GVELWPRKLA 214 (307)
Q Consensus 151 ~p~~p~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~--~~~~~~r~~~ 214 (307)
.+. ....... .+.... .+.+|...-. .....|...+. ......+.+.
T Consensus 155 ~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~-----------~~~~lp~~~~~~~~~~~~~~~~~ 217 (422)
T 1q9j_A 155 ITP---QPTPLSM---EAVLAQRGIRKQGLSGAERFMSVMYAYEIP-----------ATETPAVLAHPGLPQAVPVTRLW 217 (422)
T ss_dssp CCC---CCCCBCH---HHHHHHSSCCC-----CTTSSTTTTCC------------------------CCSBCCCCEEEEC
T ss_pred CCC---CCCCCCH---HHHHHhcCCcccccchhhhhhhhhhcccCC-----------CcccCCCCCCCCCCCCccceEEE
Confidence 111 1111110 000000 0122211000 00001111000 0000122233
Q ss_pred EeecChHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHhhhCCCCCCCCCceEEEEEeeeecC
Q 021833 215 TATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQ 276 (307)
Q Consensus 215 ~~~~~~~~vk~ia~~~~g~TvNDvllA~~a~aL~ryl~~~g~~~~~~~~~l~~~vPvslR~~ 276 (307)
......++++++|+++ |+|+|++++|+++.+|++|... | ..++++++|++.|..
T Consensus 218 l~~~~~~~l~~~a~~~-~~t~~~~l~aa~~~~l~r~~~~-~------~~~v~~g~~~~~R~~ 271 (422)
T 1q9j_A 218 LSKQQTSDLMAFGREH-RLSLNAVVAAAILLTEWQLRNT-P------HVPIPYVYPVDLRFV 271 (422)
T ss_dssp CCHHHHHHHHHHHTTT-TCCHHHHHHHHHHHHHHHHHTC-S------SCCEEEEEEEETTTT
T ss_pred eCHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHhcccC-C------CceEEEeeeeecccc
Confidence 3444467899999999 9999999999999999999222 2 258999999999976
No 7
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=99.06 E-value=6.5e-08 Score=93.50 Aligned_cols=260 Identities=15% Similarity=0.092 Sum_probs=135.8
Q ss_pred cceEEEEEEEeCCCC----Ch----HHHHHHHHHHhhhcCccccceeeeCCCCCceee-e-c--ccCcc----CceeeeC
Q 021833 21 MNTIIHCVVGFERPI----DV----PKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWR-E-T--SVDID----RHFVEVH 84 (307)
Q Consensus 21 ~~~~i~~v~~~~g~~----d~----~~l~~~l~~~~~~~~p~lr~r~~~~~~g~p~W~-~-~--~~d~~----~hv~~~~ 84 (307)
..+++++-+++..+. +. +.|++|+...=- .||-+.+++..++.+.+.|+ . + +-+++ .-+.+..
T Consensus 51 ~~~~~~~~~~~~~~~~t~l~~~~l~~~lr~AW~~lR~-~hP~iA~~v~~d~~~~~~~~Y~~~~~~~~~~~Wl~~Tf~v~~ 129 (519)
T 3fot_A 51 YDLYIATSLRNIAPASTLLTLQNLKEMFELALLDARF-EHPECACTVSWDDEVPAIITYESPESNESARDWARGCIHVQP 129 (519)
T ss_dssp TCEEEEEEEEECCCTTCCCCHHHHHHHHHHHHHHHHH-HCGGGGCEEECCSSSSCEEEEECCSSHHHHHHHHHHHEEEEE
T ss_pred ceEEEEEEEEecCCCCccccHHHHHHHHHHHHHHHHh-hCCcceeEEeeCCCCcccEEEecCCCHHHHHHHHHhcEEEeC
Confidence 456666777766554 33 445555544223 69999999875522233444 2 1 11221 1122221
Q ss_pred CchHHHHHHHHh------hCCCCCCCCCCCeEEEEEe-----C----C--cEE-EEEeeccccccchHHHHHHHhccccC
Q 021833 85 DSTSVNDYVAGL------SFSSPLSEDKPLWEVHVLA-----E----H--RCA-VFRIHHALGDGISLVSMLLAGCRLAD 146 (307)
Q Consensus 85 ~~~~l~~~v~~~------~~~~pld~~rPlW~~~li~-----~----~--~~a-~~k~HHal~DG~s~~~ll~~l~~~~~ 146 (307)
+.+.-+++..++ .+. . +-.+.+.+++|. + + +.. +|+.||.++||+|+..|+..+++...
T Consensus 130 ~~~t~~e~~~~~~~~r~~~~~-~--~p~~~~~l~~v~~~~~~~~~~p~~~~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~ 206 (519)
T 3fot_A 130 TAKSALDLWSEMEEGRAAAND-N--TPSKSIELFLLSDVSTDSTPIPQDATVEILFHSNHLFWDGIGCRKFVGDLFRLVG 206 (519)
T ss_dssp CSCCHHHHHHHHHHHHHHTC--C--CCCCSCEEEEEESSSSTTSCCCTTCEEEEEEEECGGGCCHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHhhhhhhccccc-C--CCccceEEEEEeccccccccCCCCceEEEEEEeCceeEchHhHHHHHHHHHHHHH
Confidence 112222232222 222 1 123789999975 1 1 455 99999999999999999988886433
Q ss_pred CCC------CCCCCCCC--------CCCCCCC---c--hhhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCccccCCCCC
Q 021833 147 DPE------ALPAVAGG--------KRTESAG---K--IGSLWGLLKMVLLSIVFVLEFLLRALWVSDRKTAISGGAGVE 207 (307)
Q Consensus 147 ~~~------~~p~~p~~--------~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~ 207 (307)
++. ..+.+..+ ....... . .......++.+...+. . .. ..-..|++....
T Consensus 207 ~~~~~~~~~~~~~~~~g~E~~~L~P~~e~~~~~p~~~~~~e~~~~~~~~~~~~~---~----~~--~~~~~P~~~~~~-- 275 (519)
T 3fot_A 207 SYIGRSDSREMKKIQWGQEIKNLSPPVVDSLKLDINTLGSEFDDKCTEYTSALV---A----NY--KSRGMKFQPGLA-- 275 (519)
T ss_dssp TSTTC-CGGGSCCCCTTTTGGGSCCCTGGGBSSCGGGCCHHHHHHHHHHHHHHH---H----HH--HSCCSBCCCCCC--
T ss_pred hhhccCCccCCCcCCCCcccccCCcCHHHHhCCCCCCCCHHHHHHHHHHHHHhh---c----CC--CcccCCCCCCCC--
Confidence 221 11111000 0000000 0 0011111121111110 1 00 111233432222
Q ss_pred CCCeEEEEeecC---hHHHHHHHHHc--CCCchhhHHHHHHHHHHHHHHhhhCCCCCCCCCceEEEEEeeeecCCCcchh
Q 021833 208 LWPRKLATATFS---IDDMKAVKKAI--AGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQER 282 (307)
Q Consensus 208 ~~~r~~~~~~~~---~~~vk~ia~~~--~g~TvNDvllA~~a~aL~ryl~~~g~~~~~~~~~l~~~vPvslR~~~~~~~~ 282 (307)
..+ .....++ .+++++.||++ ||+|||.++.|+++.++.++....+ .++...+.+.+|||+|+.=.....
T Consensus 276 -~~~-~~~~~ls~~~t~~L~~~ck~~~~~g~Tvt~~l~Aa~~~al~~~~~~~~---~~~~~~~~~~~pvnlR~~l~~~~~ 350 (519)
T 3fot_A 276 -LPR-CVIHKLSADESIDIVKAVKTRLGPGFTISHLTQAAIVLALLDHLKPND---LSDDEVFISPTSVDGRRWLREDIA 350 (519)
T ss_dssp -CEE-EEEEECCHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHC-------CCTTCCEEEEEEEECGGGBCHHHH
T ss_pred -Ccc-eEEEEcCHHHHHHHHHHHHhcCCCCeeHHHHHHHHHHHHHHhhcCCcc---cCCCccEEEEeeeeccccCCCccc
Confidence 222 3334444 55677778876 6999999999999999999754321 122357999999999976333445
Q ss_pred ccCCCCeeEEeecccccc
Q 021833 283 AGGTNLACFCCQFIITKV 300 (307)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~ 300 (307)
.|..+.....+|+.+..+
T Consensus 351 ~n~~~~~~~~~~~~v~~i 368 (519)
T 3fot_A 351 SNFYAMCQTAAVVRIENL 368 (519)
T ss_dssp TSCCSCCEEEEEEEECCG
T ss_pred ccccceeeeeeeeEecCc
Confidence 567777777888877554
No 8
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=98.08 E-value=0.00044 Score=65.41 Aligned_cols=265 Identities=12% Similarity=0.016 Sum_probs=133.6
Q ss_pred CcCCcccccccccCcceEEEEEEEeCCCCC------hHHHHHHHHHHhhhcCccccceeeeCC--CCCceeeecccCccC
Q 021833 7 EPLTPAGRLFLQPHMNTIIHCVVGFERPID------VPKSKDAVMSSIMVRHPRFRSVLVRDK--RGLEHWRETSVDIDR 78 (307)
Q Consensus 7 ~~Ls~~d~~~l~~~~~~~i~~v~~~~g~~d------~~~l~~~l~~~~~~~~p~lr~r~~~~~--~g~p~W~~~~~d~~~ 78 (307)
.+||..|+.++. ...+..+.+|......+ .+.|+++|.+.+. .++.|.-|++... .|++...-.+ ..
T Consensus 22 ~~LS~lD~~~~~-~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~-~~~plAGRl~~~~~~~g~~~i~c~~---~~ 96 (453)
T 2xr7_A 22 LPLTYFDHVWLA-FHRMRRILFYKLPISRPDFVQTIIPTLKDSLSLTLK-YYLPLAGNVACPQDWSGYPELRYVT---GN 96 (453)
T ss_dssp EECCHHHHGGGG-SCCEEEEEEEECCCCSHHHHHTHHHHHHHHHHHHHT-TSGGGGSCCEEESSTTCCCEEEEET---TC
T ss_pred ECCCHHHhhhhh-cCCccEEEEEeCCCCCchhHHHHHHHHHHHHHHHhh-hccccCeeEEccCCCCCCEEEEecC---CC
Confidence 477888876542 22233333444333211 4789999999999 9999999997642 4555443110 01
Q ss_pred ceee--eCCchHHHHHHH----------HhhCCCCCC-CC-----CCCeEEEEEe--CCcEE-EEEeeccccccchHHHH
Q 021833 79 HFVE--VHDSTSVNDYVA----------GLSFSSPLS-ED-----KPLWEVHVLA--EHRCA-VFRIHHALGDGISLVSM 137 (307)
Q Consensus 79 hv~~--~~~~~~l~~~v~----------~~~~~~pld-~~-----rPlW~~~li~--~~~~a-~~k~HHal~DG~s~~~l 137 (307)
-|.+ ...+..+.++.. ++....+.. .. .|+-.+.+-. .|.++ -+.+||+++||.|+..|
T Consensus 97 gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~~H~v~Dg~~~~~F 176 (453)
T 2xr7_A 97 SVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGISIGFTNHHVAGDGATIVKF 176 (453)
T ss_dssp CCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEETTTEEEEEEEECTTTCCSHHHHHH
T ss_pred ceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEccCCcEEEEEeeeeeeechhHHHHH
Confidence 1211 111122333321 111110000 01 5766555555 47788 99999999999999999
Q ss_pred HHHhccccC--C-CC-CCCC-CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhcccCCCCC-ccc-cCCCCCCCC
Q 021833 138 LLAGCRLAD--D-PE-ALPA-VAGGKRTESAGKIGSLWGLLKMVLLSIVFVLEFLLRALWVSDRKT-AIS-GGAGVELWP 210 (307)
Q Consensus 138 l~~l~~~~~--~-~~-~~p~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-p~~-~~~~~~~~~ 210 (307)
+..+..... . +. ..+. .|.-.+..... ...+.. .. .. .....+.. +.. .........
T Consensus 177 l~~wa~~~r~G~~~~~~~~~~~P~~dr~~l~~-p~~~~~---~~-------~~-----~~~~~~~~~~~~~~~~~~~~~~ 240 (453)
T 2xr7_A 177 VRAWALLNKFGGDEQFLANEFIPFYDRSVIKD-PNGVGM---SI-------WN-----EMKKYKHMMKMSDVVTPPDKVR 240 (453)
T ss_dssp HHHHHHHHHTTTCGGGSCGGGSCBCCCSSSCC-SSCHHH---HT-------TT-----TGGGCTTTSCCSCCCCCCSCCC
T ss_pred HHHHHHHhhcCCCcccCCCCCCCccccccccC-CCCcch---HH-------HH-----hccccCCccccccccCCCCceE
Confidence 987654221 1 10 0111 01101110000 001000 00 00 00000110 110 000000024
Q ss_pred eEEEEeecChHHHHHHHHHc----CCCchhhHHHHHHHHHHHHHHhhhCCCCCCCCCceEEEEEeeeecCCC----cchh
Q 021833 211 RKLATATFSIDDMKAVKKAI----AGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPG----LQER 282 (307)
Q Consensus 211 r~~~~~~~~~~~vk~ia~~~----~g~TvNDvllA~~a~aL~ryl~~~g~~~~~~~~~l~~~vPvslR~~~~----~~~~ 282 (307)
+.+....-.++.+|+.+... +.+|.+|++.|.+-.++.+-.........+ +...++.++||+|+.=+ .+.+
T Consensus 241 ~~f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~-~~~~~l~~~vd~R~rl~pplP~~Y~ 319 (453)
T 2xr7_A 241 GTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDE-NGMEFFGCAADCRAQFNPPLPPSYF 319 (453)
T ss_dssp EEEEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCT-TSEEEEEEECCTTSCSSSCCCTTBC
T ss_pred EEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhccccccCCC-CcceEEEEEecccccCCCCCCcccc
Confidence 56666666677777766542 148999999999887777665442100012 36899999999997522 3456
Q ss_pred ccCCCCeeEEe
Q 021833 283 AGGTNLACFCC 293 (307)
Q Consensus 283 ~~~~~~~~~~~ 293 (307)
||........+
T Consensus 320 GN~~~~~~~~~ 330 (453)
T 2xr7_A 320 GNALVGYVART 330 (453)
T ss_dssp SCCCCEEEEEE
T ss_pred cceeeeeeeee
Confidence 77665554433
No 9
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=98.07 E-value=0.00022 Score=66.88 Aligned_cols=238 Identities=9% Similarity=0.037 Sum_probs=124.9
Q ss_pred CCcCCcccccccccCcceEEEEEEEeCCCC--------ChHHHHHHHHHHhhhcCccccceeeeC-----CCCCceeee-
Q 021833 6 DEPLTPAGRLFLQPHMNTIIHCVVGFERPI--------DVPKSKDAVMSSIMVRHPRFRSVLVRD-----KRGLEHWRE- 71 (307)
Q Consensus 6 ~~~Ls~~d~~~l~~~~~~~i~~v~~~~g~~--------d~~~l~~~l~~~~~~~~p~lr~r~~~~-----~~g~p~W~~- 71 (307)
..+||..|+.. +. .++..++.|+.+. ..+.|+++|.+.+. .++.|.-|++.. ....-.+++
T Consensus 25 ~~~LS~lD~~~--~~--~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~-~~~plAGRl~~~~~i~c~~~Gv~fv~A 99 (421)
T 2bgh_A 25 CYKISHLDQLL--LT--CHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLT-HFYPLAGRINVNSSVDCNDSGVPFVEA 99 (421)
T ss_dssp CCBCCHHHHTS--CS--SEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTT-TSGGGGSEEETTTEEECCCCCEEEEEE
T ss_pred ccCCChHHhcc--cc--cccceEEEEeCCCccccchhhHHHHHHHHHHHHhh-hcchhccccCCCcEEEEcCCceEEEEE
Confidence 46788888752 22 3444455554321 25889999999999 999999988631 111122221
Q ss_pred -cccCccCceee-eCCchHHHHHHHHhhCCCCC-------CCCCCCeEEEEEe--CCcEE-EEEeeccccccchHHHHHH
Q 021833 72 -TSVDIDRHFVE-VHDSTSVNDYVAGLSFSSPL-------SEDKPLWEVHVLA--EHRCA-VFRIHHALGDGISLVSMLL 139 (307)
Q Consensus 72 -~~~d~~~hv~~-~~~~~~l~~~v~~~~~~~pl-------d~~rPlW~~~li~--~~~~a-~~k~HHal~DG~s~~~ll~ 139 (307)
.+.+++++... + ....++ ++... .. ..+.|+..+.+-. .|+++ -+.+||+++||.|+..|+.
T Consensus 100 ~~d~~l~~~~~~~p-~~~~~~----~l~p~-~~~~~~~~~~~~~pll~vQvt~f~cgG~~lg~~~~H~v~Dg~~~~~fl~ 173 (421)
T 2bgh_A 100 RVQAQLSQAIQNVV-ELEKLD----QYLPS-AAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLN 173 (421)
T ss_dssp EESSCHHHHHSCCS-SGGGGG----GGSSS-CSSSSSSSCCCTTCSEEEEEEECTTSCEEEEEEEETTTCCHHHHHHHHH
T ss_pred EEcCCHHHHhccCC-ChHHHH----hcCCC-CCCccccccccCCceEEEEEEEEcCCCEEEEEEeeEEechHHHHHHHHH
Confidence 22222222211 1 011222 22222 11 2246887777666 37777 9999999999999999998
Q ss_pred HhccccCCCCCCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCccccCCCCCCCCeEEEEeecC
Q 021833 140 AGCRLADDPEALPAVAGGKRTESAGKIGSLWGLLKMVLLSIVFVLEFLLRALWVSDRKTAISGGAGVELWPRKLATATFS 219 (307)
Q Consensus 140 ~l~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~r~~~~~~~~ 219 (307)
.+........ .+ .. + .+. + + . . +.+.. ...|..++. .. ..-......++
T Consensus 174 ~wa~~~rg~~-~~--~~--P-~~d---r-~-~-------~-------l~p~~-~~~~~~~~~--~~---~~~~~~~f~f~ 222 (421)
T 2bgh_A 174 AWTATCRGET-EI--VL--P-NFD---L-A-A-------R-------HFPPV-DNTPSPELV--PD---ENVVMKRFVFD 222 (421)
T ss_dssp HHHHHHTTCS-CC--CC--C-BCS---H-H-H-------H-------HSCCC-TTCCCCCCC--CC---SSEEEEEEEEC
T ss_pred HHHHHhcCCC-CC--CC--C-ccc---c-c-c-------c-------cCCCc-ccCCCCccC--Cc---cceEEEEEEEC
Confidence 7654322111 01 11 1 111 0 0 0 0 00000 000110110 01 11223345556
Q ss_pred hHHHHHHHHHc------CCCchhhHHHHHHHHHHHHHHhhhCCCCCCCCCceEEEEEeeeecCCC----cchhccCCCCe
Q 021833 220 IDDMKAVKKAI------AGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPG----LQERAGGTNLA 289 (307)
Q Consensus 220 ~~~vk~ia~~~------~g~TvNDvllA~~a~aL~ryl~~~g~~~~~~~~~l~~~vPvslR~~~~----~~~~~~~~~~~ 289 (307)
.+++++++++. +.+|.+|++.|.+-.++.+-..... .+ .+..++.++||+|+.=+ .+.+||.....
T Consensus 223 ~~~i~~LK~~a~~~~~~~~~St~d~l~A~iW~~~~~Ar~~~~---~~-~~~~~l~~~vd~R~rl~pplP~~y~GN~~~~~ 298 (421)
T 2bgh_A 223 KEKIGALRAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKY---GA-KNKFVVVQAVNLRSRMNPPLPHYAMGNIATLL 298 (421)
T ss_dssp HHHHHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHS---CC-CSCEEEEEEEESGGGSSSCCCTTBCSCCEEEE
T ss_pred HHHHHHHHHHhhccCCCCCCchhHhHHHHHHHHHHHHhcccC---CC-CCceEEEEEecCccccCCCCCCCccceEEEEE
Confidence 66666665543 1479999999987777766654431 12 35799999999997522 33455554433
No 10
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=98.06 E-value=6.1e-05 Score=71.15 Aligned_cols=130 Identities=13% Similarity=0.027 Sum_probs=76.5
Q ss_pred CCcCCcccccccccCcceEEEEEEEeCCC---CChHHHHHHHHHHhhhcCccccceeeeCCCCCceeeec----------
Q 021833 6 DEPLTPAGRLFLQPHMNTIIHCVVGFERP---IDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRET---------- 72 (307)
Q Consensus 6 ~~~Ls~~d~~~l~~~~~~~i~~v~~~~g~---~d~~~l~~~l~~~~~~~~p~lr~r~~~~~~g~p~W~~~---------- 72 (307)
.-+||+.|..+. ..++..+.+|...+. ...+.|+++|.+.+. .++.|.-|++....|++...-.
T Consensus 26 ~~~LS~lD~~~~--~~~~~~~~~y~~~~~~~~~~~~~Lk~sLs~~L~-~f~plAGRl~~~~~g~~~i~c~~~Gv~fv~A~ 102 (439)
T 4g22_A 26 NLWNSNVDLVVP--NFHTPSVYFYRPTGSSNFFDAKVLKDALSRALV-PFYPMAGRLKRDEDGRIEIECNGEGVLFVEAE 102 (439)
T ss_dssp EECCCHHHHSCC--TTCCCEEEEECCCSCTTTTCHHHHHHHHHHHTT-TTGGGGCEEEECTTSCEEEECCCCCEEEEEEE
T ss_pred eecCChhHhCcc--ccceeeEEEEcCCCCccccHHHHHHHHHHHHHh-hccccceeeeeCCCCCEEEEECCCCCEEEEEE
Confidence 457888887632 222333333433221 236899999999999 9999999998653455544311
Q ss_pred -ccCccCceeeeCCchHHHHHHHHhhCCCCCC---CCCCCeEEEEEe--CCcEE-EEEeeccccccchHHHHHHHhcc
Q 021833 73 -SVDIDRHFVEVHDSTSVNDYVAGLSFSSPLS---EDKPLWEVHVLA--EHRCA-VFRIHHALGDGISLVSMLLAGCR 143 (307)
Q Consensus 73 -~~d~~~hv~~~~~~~~l~~~v~~~~~~~pld---~~rPlW~~~li~--~~~~a-~~k~HHal~DG~s~~~ll~~l~~ 143 (307)
+.+++++-.. .....+++++ -.. +.+ .+.|+-.+.+-. .|.++ -+.+||+++||.|+.+|+..+..
T Consensus 103 ~d~~l~~l~~~-~p~~~~~~l~---p~~-~~~~~~~~~pll~vQvT~f~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~ 175 (439)
T 4g22_A 103 SDGVVDDFGDF-APTLELRRLI---PAV-DYSQGISSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSD 175 (439)
T ss_dssp ESSCGGGGTTC-CCCGGGGGGS---CCC-CTTSCTTSSCSEEEEEEECTTSCEEEEEEECTTTCCHHHHHHHHHHHHH
T ss_pred cCCcHHHhcCC-CCCHHHHhcC---CCC-CcccccccCceeEEEEEEecCCCEEEEEEeeeccCcHHHHHHHHHHHHH
Confidence 1112211100 0112222221 111 221 234887777766 47788 99999999999999999987653
No 11
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=97.48 E-value=0.0058 Score=57.70 Aligned_cols=241 Identities=15% Similarity=0.033 Sum_probs=115.8
Q ss_pred CcCCcccccccccCcceEEEEEEEeCCCCC------hHHHHHHHHHHhhhcCccccceee-eC-CCCCceee-ec-c---
Q 021833 7 EPLTPAGRLFLQPHMNTIIHCVVGFERPID------VPKSKDAVMSSIMVRHPRFRSVLV-RD-KRGLEHWR-ET-S--- 73 (307)
Q Consensus 7 ~~Ls~~d~~~l~~~~~~~i~~v~~~~g~~d------~~~l~~~l~~~~~~~~p~lr~r~~-~~-~~g~p~W~-~~-~--- 73 (307)
.+||..|..++.. .++..+.+|......+ .+.|+++|.+.+. .++.|.-|++ .. ..|++... .+ +
T Consensus 27 ~~LS~lD~~~~~~-~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~-~~~plAGRl~~~~~~~g~~~i~c~~~~gv~ 104 (454)
T 2e1v_A 27 LQLTFFDFFWLRS-PPINNLFFYELPITRSQFTETVVPNIKHSLSITLK-HFYPFVGKLVVYPAPTKKPEICYVEGDSVA 104 (454)
T ss_dssp EECCHHHHTTTTC-CCEEEEEEEECCCCHHHHHHTHHHHHHHHHHHHHT-TCGGGGSEEEECSSSSSCCEEEECTTCCEE
T ss_pred ecCchHHhhhhcc-CCccEEEEEeCCCCcchhhHHHHHHHHHHHHHHhh-hccccceeeeeccCCCCCEEEEECCCCcEE
Confidence 4677777765422 2233333444332211 4789999999999 9999999997 43 34444433 11 1
Q ss_pred -------cCccCcee-eeCCchHHHHHHHHhhCCCCCC------CCCCCeEEEEEe--CCcEE-EEEeeccccccchHHH
Q 021833 74 -------VDIDRHFV-EVHDSTSVNDYVAGLSFSSPLS------EDKPLWEVHVLA--EHRCA-VFRIHHALGDGISLVS 136 (307)
Q Consensus 74 -------~d~~~hv~-~~~~~~~l~~~v~~~~~~~pld------~~rPlW~~~li~--~~~~a-~~k~HHal~DG~s~~~ 136 (307)
.++++... .+.....+. ++....+.. .+.|+-.+.+-. .|+++ -+.+||+++||.|+..
T Consensus 105 fv~A~~~~~l~~l~~~~~~~~~~~~----~l~p~~~~~~~~~~~~~~pll~vQvT~f~cgG~~lg~~~~H~v~Dg~~~~~ 180 (454)
T 2e1v_A 105 VTFAECNLDLNELTGNHPRNCDKFY----DLVPILGESTRLSDCIKIPLFSVQVTLFPNQGIAIGITNHHCLGDASTRFC 180 (454)
T ss_dssp EEEEEECSCGGGTSSSSCEEGGGGG----GGSCCCCCCEECSSCEEEECEEEEEEEETTTEEEEEEEECGGGCCHHHHHH
T ss_pred EEEEEeCCCHHHhcCCCCCcchhhh----cCCCCCCCcccccccccCceEEEEEEEecCCcEEEEEEeeeeecchhHHHH
Confidence 11111100 000001121 222110100 012665555544 47788 9999999999999999
Q ss_pred HHHHhccccC-CCC-C---CCC-CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCccccCCCCCCCC
Q 021833 137 MLLAGCRLAD-DPE-A---LPA-VAGGKRTESAGKIGSLWGLLKMVLLSIVFVLEFLLRALWVSDRKTAISGGAGVELWP 210 (307)
Q Consensus 137 ll~~l~~~~~-~~~-~---~p~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~ 210 (307)
|+..+..... ... . .+. .|.-.+ ... ... .-...+...... .. ...+ ..+..+ .+.. ...
T Consensus 181 Fl~awa~~~r~g~~~~~~~~~~~~P~~dr--~l~---~p~-~~~~~~~~~~~~-~~-~~~~--~~~~~~--~~~~--~~~ 246 (454)
T 2e1v_A 181 FLKAWTSIARSGNNDESFLANGTRPLYDR--IIK---YPM-LDEAYLKRAKVE-SF-NEDY--VTQSLA--GPSD--KLR 246 (454)
T ss_dssp HHHHHHHHHHTTSCCHHHHHHSCCCBCCC--CCC---CHH-HHHHHHHHTTCT-TH-HHHC--CCCCCC--CCCC--EEE
T ss_pred HHHHHHHHhccCCCccccCCCCCCCcccc--cCC---CCC-cchHHHHhhhcc-cc-cccc--CcccCC--CCCC--ceE
Confidence 9987654221 110 0 001 011111 111 000 100000000000 00 0000 011111 1111 012
Q ss_pred eEEEEeecChHHHHHHHHHc----CCCchhhHHHHHHHHHHHHHHhhhCCCCCCCCCceEEEEEeeeecC
Q 021833 211 RKLATATFSIDDMKAVKKAI----AGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQ 276 (307)
Q Consensus 211 r~~~~~~~~~~~vk~ia~~~----~g~TvNDvllA~~a~aL~ryl~~~g~~~~~~~~~l~~~vPvslR~~ 276 (307)
+.+....-.++.+|+.+... +.+|.+|++.|.+-.++.+-. . ++..++.++||+|+.
T Consensus 247 ~~f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar---~------~~~~~l~~~vd~R~r 307 (454)
T 2e1v_A 247 ATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR---N------DKLQLFGFPIDRRAR 307 (454)
T ss_dssp EEEEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH---C------CSEEEEEEEEECGGG
T ss_pred EEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc---C------CCceEEEEEecchhc
Confidence 34555555555666655432 148999999998877766654 2 258999999999975
No 12
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=97.11 E-value=0.084 Score=49.47 Aligned_cols=132 Identities=10% Similarity=0.040 Sum_probs=72.1
Q ss_pred CcCCcccccccccCcceEEEEEEEeC--CCCC----hHHHHHHHHHHhhhcCccccceeeeCC-----CCCceeeecccC
Q 021833 7 EPLTPAGRLFLQPHMNTIIHCVVGFE--RPID----VPKSKDAVMSSIMVRHPRFRSVLVRDK-----RGLEHWRETSVD 75 (307)
Q Consensus 7 ~~Ls~~d~~~l~~~~~~~i~~v~~~~--g~~d----~~~l~~~l~~~~~~~~p~lr~r~~~~~-----~g~p~W~~~~~d 75 (307)
.+||..|+..-.+ ..|+..++.|. .+.+ .+.|+++|.+.+. .++.|.-|++... .|.++-+..+ .
T Consensus 5 ~~Ls~lD~~~~~~--~~y~~~~~~y~~~~~~~~~~~~~~Lk~sLs~~L~-~~~plAGRl~~~~~~~~~~g~~~i~~~~-~ 80 (451)
T 2rkv_A 5 IQLDTLGQLPGLL--SIYTQISLLYPVSDSSQYPTIVSTFEQGLKRFSE-AVPWVAGQVKAEGISEGNTGTSFIVPFE-D 80 (451)
T ss_dssp EECCGGGGCTTGG--GCEEEEEEEEECSCGGGHHHHHHHHHHHHHHHHH-HSGGGGCEEEEESCBTTBCCEEEEECCC-S
T ss_pred ccCChhhcCcccc--ccceeEEEEEECCCCCCHHHHHHHHHHHHHHHHH-hCCceeEEEEECCCCCCCCCcEEEeecC-C
Confidence 4889998874111 23333344443 2111 4779999999999 9999999987642 2433322111 0
Q ss_pred ccCceeee--C------CchHHHHH------H--HHhhCC--CCC------CCCCCCeEEEEEe-CCcEE-EEEeecccc
Q 021833 76 IDRHFVEV--H------DSTSVNDY------V--AGLSFS--SPL------SEDKPLWEVHVLA-EHRCA-VFRIHHALG 129 (307)
Q Consensus 76 ~~~hv~~~--~------~~~~l~~~------v--~~~~~~--~pl------d~~rPlW~~~li~-~~~~a-~~k~HHal~ 129 (307)
.. .+.+. . +-+++.+. + ..+... .|. +.+.|+-.+.+-- .|.++ -+.+||+++
T Consensus 81 ~~-~~~va~~~~d~~~p~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~~GG~~lg~~~~H~v~ 159 (451)
T 2rkv_A 81 VP-RVVVKDLRDDPSAPTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFIKGGLILTVNGQHGAM 159 (451)
T ss_dssp SC-EEEEEECTTCTTSCBHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEEBTEEEEEEEEETTTC
T ss_pred CC-eEEEEeCCCCCCCCCHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEecCceeeeeeehhccc
Confidence 00 01111 1 11222211 0 012111 011 1135776555434 67777 999999999
Q ss_pred ccchHHHHHHHhcc
Q 021833 130 DGISLVSMLLAGCR 143 (307)
Q Consensus 130 DG~s~~~ll~~l~~ 143 (307)
||.|+.+|+..+..
T Consensus 160 Dg~g~~~Fl~awa~ 173 (451)
T 2rkv_A 160 DMVGQDAVIRLLSK 173 (451)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH
Confidence 99999999987654
No 13
>1baz_A ARC repressor; transcription regulation; 1.90A {Enterobacteria phage P22} SCOP: a.43.1.1 PDB: 1bdv_A* 1arq_A 1arr_A 1bdt_A* 1par_A* 1myk_A 1qtg_A 1b28_A 1myl_A
Probab=65.02 E-value=9.6 Score=24.17 Aligned_cols=27 Identities=19% Similarity=0.388 Sum_probs=22.3
Q ss_pred hHHHHHHHHHcCCCchhhHHHHHHHHHH
Q 021833 220 IDDMKAVKKAIAGATINDVLFGVVSSGL 247 (307)
Q Consensus 220 ~~~vk~ia~~~~g~TvNDvllA~~a~aL 247 (307)
.+.++..|+.. |.|+|..+..++..++
T Consensus 19 ~~~l~~~A~~~-grS~N~~i~~~L~~~l 45 (53)
T 1baz_A 19 LDLVRKVAEEN-GRSVNSEIYQRVMESF 45 (53)
T ss_dssp HHHHHHHHHHT-TCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCCHHHHHHHHHHHHH
Confidence 45788889999 9999999988877554
No 14
>3qoq_A Alginate and motility regulator Z; protein-DNA complex, ribbon-helix-helix; HET: DNA; 3.10A {Pseudomonas aeruginosa}
Probab=64.66 E-value=9.2 Score=25.87 Aligned_cols=34 Identities=9% Similarity=0.108 Sum_probs=26.8
Q ss_pred EEeecChHHHHHHHHHcCCCchhhHHHHHHHHHHH
Q 021833 214 ATATFSIDDMKAVKKAIAGATINDVLFGVVSSGLS 248 (307)
Q Consensus 214 ~~~~~~~~~vk~ia~~~~g~TvNDvllA~~a~aL~ 248 (307)
....--.++++..|+.. |.|+|..+..++..+|.
T Consensus 25 RlP~eL~~~L~~~A~~~-grSlNaeIv~~Le~sl~ 58 (69)
T 3qoq_A 25 RLPEGMREQIAEVARSH-HRSMNSEIIARLEQSLL 58 (69)
T ss_dssp ECCTTHHHHHHHHHHHT-TCCHHHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHHH
Confidence 34444467899999999 99999999988876554
No 15
>1nla_A Transcriptional repressor ARC; 3(10) helix, beta-ribbon, beta-sheet, structural switching; NMR {Enterobacteria phage P22} SCOP: a.43.1.1
Probab=56.22 E-value=14 Score=24.49 Aligned_cols=30 Identities=17% Similarity=0.350 Sum_probs=24.8
Q ss_pred hHHHHHHHHHcCCCchhhHHHHHHHHHHHHH
Q 021833 220 IDDMKAVKKAIAGATINDVLFGVVSSGLSRY 250 (307)
Q Consensus 220 ~~~vk~ia~~~~g~TvNDvllA~~a~aL~ry 250 (307)
-+.++..|++. |.|+|.-+..++..++...
T Consensus 19 h~~l~~~A~~~-GrSlN~~Iv~~L~~~l~~~ 48 (64)
T 1nla_A 19 LDLVRKVAEEN-GRSVNSEIYQRVMESFKKE 48 (64)
T ss_dssp HHHHHHHHHHH-TSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCCHHHHHHHHHHHHHhcc
Confidence 45788889999 9999999999988766544
No 16
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=51.63 E-value=16 Score=30.46 Aligned_cols=61 Identities=13% Similarity=-0.032 Sum_probs=44.8
Q ss_pred EEEEeecChHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHhhhC----CCCCCCCCceEEEEEe-ee
Q 021833 212 KLATATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRS----PNALPEGLRITGLAMV-NI 273 (307)
Q Consensus 212 ~~~~~~~~~~~vk~ia~~~~g~TvNDvllA~~a~aL~ryl~~~g----~~~~~~~~~l~~~vPv-sl 273 (307)
-..+.+++...+.+.+++. +.|+|+.++=|++.||.++=.-.. +++..-.+.+.+++.| +.
T Consensus 30 ~~~~~evDvt~l~~~rk~~-~ls~~~~~ikAv~~Al~~~P~~n~~~~~~~~i~~~~~i~igvAVf~t 95 (217)
T 2i9d_A 30 LSITSEVECGGARQRAKAA-GQSFFLHYLYAVLRAANEIPEFRYRIDPDGRVVLYDTIDMLSPIKIK 95 (217)
T ss_dssp EEEEEEEECHHHHHHHHHT-TCCHHHHHHHHHHHHHHHSGGGGEEECTTSCEEEESCCEEEEEEECS
T ss_pred EEEEEEEEhHHHHHHHHHc-CCCHHHHHHHHHHHHHHhCHHhheEEcCCCEEEEecccCeEEEEEec
Confidence 4568999999999999999 999999999999999998733210 0111112457777777 54
No 17
>2k9i_A Plasmid PRN1, complete sequence; plasmid COPY control protein, ribbon helix helix protein, DNA binding protein; NMR {Sulfolobus islandicus} PDB: 3ft7_A
Probab=49.49 E-value=24 Score=21.86 Aligned_cols=37 Identities=22% Similarity=0.232 Sum_probs=26.9
Q ss_pred EEEeecChHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHhhh
Q 021833 213 LATATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHR 254 (307)
Q Consensus 213 ~~~~~~~~~~vk~ia~~~~g~TvNDvllA~~a~aL~ryl~~~ 254 (307)
+....-..+.++.+|+.. |.|.++++--| |..|+..+
T Consensus 14 vrl~~el~~~l~~~a~~~-g~s~s~~ir~a----i~~~l~~~ 50 (55)
T 2k9i_A 14 VYIPQEWHDRLMEIAKEK-NLTLSDVCRLA----IKEYLDNH 50 (55)
T ss_dssp EEECHHHHHHHHHHHHHH-TCCHHHHHHHH----HHHHHHHH
T ss_pred EEcCHHHHHHHHHHHHHh-CCCHHHHHHHH----HHHHHHHh
Confidence 444455577888899999 99999987655 45666655
No 18
>1p94_A Plasmid partition protein PArg; ribbon-helix-helix, dimer, DNA binding, cell cycle; NMR {Salmonella enterica} SCOP: a.43.1.3
Probab=49.13 E-value=19 Score=24.70 Aligned_cols=37 Identities=22% Similarity=0.257 Sum_probs=26.8
Q ss_pred EEEeecChHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHhhh
Q 021833 213 LATATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHR 254 (307)
Q Consensus 213 ~~~~~~~~~~vk~ia~~~~g~TvNDvllA~~a~aL~ryl~~~ 254 (307)
+....---.++|.+|... |.|++|++--++. +|+.++
T Consensus 39 i~i~~~lh~rlK~~Aa~~-g~Smsdvvreli~----~~L~~~ 75 (76)
T 1p94_A 39 VNFDEEKHTRFKAACARK-GTSITDVVNQLVD----NWLKEN 75 (76)
T ss_dssp EEEEHHHHHHHHHHHHHH-TCCHHHHHHHHHH----HHHHHC
T ss_pred EEcCHHHHHHHHHHHHHc-CCCHHHHHHHHHH----HHHHhc
Confidence 334444456899999999 9999999876654 666553
No 19
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=48.28 E-value=14 Score=30.86 Aligned_cols=61 Identities=10% Similarity=-0.023 Sum_probs=43.9
Q ss_pred EEEEeecChHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHhhhC---CCCCCCCCceEEEEEe-ee
Q 021833 212 KLATATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRS---PNALPEGLRITGLAMV-NI 273 (307)
Q Consensus 212 ~~~~~~~~~~~vk~ia~~~~g~TvNDvllA~~a~aL~ryl~~~g---~~~~~~~~~l~~~vPv-sl 273 (307)
-..+.+++...+.+.+++. +.|+|+.++=|++.||+++=.-.. +++..-.+.+.+++.| +.
T Consensus 33 ~t~~~evDvt~l~~~rk~~-~ls~~~~~ikAv~~Al~~~P~~Na~~~~~~i~~~~~v~igiAV~~t 97 (219)
T 1q23_A 33 YNQTVQLDITAFLKTVKKN-KHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHE 97 (219)
T ss_dssp EEEEEEEECHHHHHHHHHT-TCCHHHHHHHHHHHHHTTCGGGSEEEETTEEEEESCCEEEEEEEET
T ss_pred EEEEEEEEhHHHHHHHHHc-CCCHHHHHHHHHHHHHHhChHhhEEEECCEEEEecccCeEEEEEec
Confidence 4568999999999999999 999999999999999997733210 0111112356677777 53
No 20
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=45.64 E-value=15 Score=30.51 Aligned_cols=61 Identities=11% Similarity=0.071 Sum_probs=43.7
Q ss_pred EEEEeecChHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHhhhC---CCCCCCCCceEEEEEe-ee
Q 021833 212 KLATATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRS---PNALPEGLRITGLAMV-NI 273 (307)
Q Consensus 212 ~~~~~~~~~~~vk~ia~~~~g~TvNDvllA~~a~aL~ryl~~~g---~~~~~~~~~l~~~vPv-sl 273 (307)
-..+.+++...+.+.+++. +.|+|+.++=|++.||+++=.-.. +++..-.+.+.+++.| +.
T Consensus 28 ~~~~~evDvt~l~~~rk~~-~ls~~~~~ikAv~~Al~~~P~~Na~~~~~~i~~~~~v~igiAVf~t 92 (213)
T 3cla_A 28 FSLTSKIDITTLKKSLDDS-AYKFYPVMIYLIAQAVNQFDELRMAIKDDELIVWDSVDPQFTVFHQ 92 (213)
T ss_dssp EEEEEEEECHHHHHHHHTS-SCCHHHHHHHHHHHHHTTCGGGSEEEETTEEEEESCCEEEEEEEET
T ss_pred EEEEEEEEHHHHHHHHHHh-CCCHHHHHHHHHHHHHhhCHHhhEEEECCEEEEEeccceeEEEEeC
Confidence 4568899999999999999 999999999999999997733210 0111112356677777 53
No 21
>2an7_A Protein PARD; bacterial antidote, ribbon-helix-helix, DNA-binding motif, plasmid addiction, DNA binding protein; NMR {Escherichia coli}
Probab=45.33 E-value=9.6 Score=26.45 Aligned_cols=24 Identities=21% Similarity=0.221 Sum_probs=20.8
Q ss_pred hHHHHHHHHHcCCCchhhHHHHHHH
Q 021833 220 IDDMKAVKKAIAGATINDVLFGVVS 244 (307)
Q Consensus 220 ~~~vk~ia~~~~g~TvNDvllA~~a 244 (307)
-.++|++|+.. |.|+|+++.-.++
T Consensus 13 H~rLKalAa~q-G~SInqli~E~lf 36 (83)
T 2an7_A 13 HQSLKALAALQ-GKTIKQYALERLF 36 (83)
T ss_dssp HHHHHHHHHHH-TSCHHHHHHHHTS
T ss_pred HHHHHHHHHHc-CCcHHHHHHHHcc
Confidence 45799999999 9999999987754
No 22
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=42.91 E-value=12 Score=31.02 Aligned_cols=22 Identities=23% Similarity=0.391 Sum_probs=19.8
Q ss_pred EEEeeccccccchHHHHHHHhc
Q 021833 121 VFRIHHALGDGISLVSMLLAGC 142 (307)
Q Consensus 121 ~~k~HHal~DG~s~~~ll~~l~ 142 (307)
.+.+||.++||.-+.+++..+-
T Consensus 184 sls~DHRvvDG~~aa~Fl~~lk 205 (213)
T 3cla_A 184 SVQVHHAVCDGFHVARFINRLQ 205 (213)
T ss_dssp EEEEETTTCCHHHHHHHHHHHH
T ss_pred EEEEcccccChHHHHHHHHHHH
Confidence 8999999999999999988754
No 23
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=40.59 E-value=14 Score=30.80 Aligned_cols=22 Identities=27% Similarity=0.276 Sum_probs=19.7
Q ss_pred EEEeeccccccchHHHHHHHhc
Q 021833 121 VFRIHHALGDGISLVSMLLAGC 142 (307)
Q Consensus 121 ~~k~HHal~DG~s~~~ll~~l~ 142 (307)
.+.+||.++||.-+.+++..+-
T Consensus 192 sls~DHRvvDG~~aa~Fl~~lk 213 (217)
T 2i9d_A 192 AMTIHHGFIDGHHLSLFYKKVE 213 (217)
T ss_dssp EEEEETTTCCHHHHHHHHHHHH
T ss_pred EEEecchhhChHHHHHHHHHHH
Confidence 8999999999999999988653
No 24
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=40.43 E-value=14 Score=30.80 Aligned_cols=23 Identities=30% Similarity=0.440 Sum_probs=20.2
Q ss_pred EEEeeccccccchHHHHHHHhcc
Q 021833 121 VFRIHHALGDGISLVSMLLAGCR 143 (307)
Q Consensus 121 ~~k~HHal~DG~s~~~ll~~l~~ 143 (307)
.+.+||.++||.-+.+|+..+-.
T Consensus 188 sls~DHRvvDG~~aa~Fl~~lk~ 210 (219)
T 1q23_A 188 AIQVHHAVCDGFHVGRMLNELQQ 210 (219)
T ss_dssp EEEEETTTCCHHHHHHHHHHHHH
T ss_pred EEEEEchhhChHHHHHHHHHHHH
Confidence 89999999999999999887543
No 25
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=35.37 E-value=48 Score=27.61 Aligned_cols=61 Identities=13% Similarity=0.031 Sum_probs=42.3
Q ss_pred EEEEeecChHHHHHHHHH-----cCCCchhhHHHHHHHHHHHHHHhhhC--C-C--CCCCCCceEEEEEeee
Q 021833 212 KLATATFSIDDMKAVKKA-----IAGATINDVLFGVVSSGLSRYLDHRS--P-N--ALPEGLRITGLAMVNI 273 (307)
Q Consensus 212 ~~~~~~~~~~~vk~ia~~-----~~g~TvNDvllA~~a~aL~ryl~~~g--~-~--~~~~~~~l~~~vPvsl 273 (307)
-..+.+++...+.+.+++ . +.|+|++++-|++.||.++=.-.. . + +....+.+.+++.|+.
T Consensus 32 ~~~~~evDvt~l~~~r~~~k~~g~-kls~~~~~ikA~~~Al~~~P~~N~~~~~~~~~i~~~~~v~igiAV~~ 102 (224)
T 3rqc_A 32 FTVMEEVDVTSMVSILDSAKARNR-KVTVTGFLARIVPSILKQYPYLNAIYDETRRVYILKKYYNIGIAVDT 102 (224)
T ss_dssp EEEEECCBTHHHHHHHHHHTTTTC-CCCHHHHHHHHHHHHHHHSGGGSBBCCSSTTCCCEECSCCEEEEEEC
T ss_pred EEEEEEEEHHHHHHHHHHHhhcCC-CCCHHHHHHHHHHHHHHhCHHhheEEeCCCCEEEEeCccceEeEEEc
Confidence 456788899988888776 4 679999999999999999854321 0 0 1111245667777753
No 26
>1u9p_A PARC; unknown function; 1.90A {Escherichia coli} SCOP: a.43.1.1
Probab=35.09 E-value=39 Score=25.35 Aligned_cols=31 Identities=16% Similarity=0.287 Sum_probs=24.5
Q ss_pred eecChHHHHHHHHHcCCCchhhHHHHHHHHHH
Q 021833 216 ATFSIDDMKAVKKAIAGATINDVLFGVVSSGL 247 (307)
Q Consensus 216 ~~~~~~~vk~ia~~~~g~TvNDvllA~~a~aL 247 (307)
..---++++..|++. |.|+|.-+..++..++
T Consensus 26 P~eLh~~La~~Ak~e-GrSLN~eIv~~Le~sl 56 (120)
T 1u9p_A 26 PREVLDLVRKVAEEN-GRSVNSEIYQRVMESF 56 (120)
T ss_dssp CHHHHHHHHHHHHHH-TCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHh
Confidence 333356788899999 9999999998887554
No 27
>2kel_A SVTR protein, uncharacterized protein 56B; homodimer, ribbon-helix-helix, transcription repres; NMR {Sulfolobus islandicus rod-shaped virus}
Probab=34.56 E-value=60 Score=20.65 Aligned_cols=35 Identities=11% Similarity=0.117 Sum_probs=24.6
Q ss_pred EeecChHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHhhh
Q 021833 215 TATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHR 254 (307)
Q Consensus 215 ~~~~~~~~vk~ia~~~~g~TvNDvllA~~a~aL~ryl~~~ 254 (307)
...---.+++..|... |.|+|+++--++. .|+..+
T Consensus 20 Id~eLH~rlk~~Aa~~-g~Sln~~i~eAL~----~yl~~~ 54 (56)
T 2kel_A 20 MDKDLKTRLKVYCAKN-NLQLTQAIEEAIK----EYLQKR 54 (56)
T ss_dssp EEHHHHHHHHHHHHHS-CCCHHHHHHHHHH----HHHHHH
T ss_pred eCHHHHHHHHHHHHHc-CCCHHHHHHHHHH----HHHHHh
Confidence 3333355788889999 9999999865554 666554
No 28
>2cpg_A REPA protein, transcriptional repressor COPG; DNA-binding protein, plasmid, gene regulation; 1.60A {Streptococcus agalactiae} SCOP: a.43.1.3 PDB: 1b01_A* 1ea4_A*
Probab=33.33 E-value=44 Score=19.58 Aligned_cols=36 Identities=8% Similarity=0.280 Sum_probs=26.2
Q ss_pred EEEeecChHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHhh
Q 021833 213 LATATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDH 253 (307)
Q Consensus 213 ~~~~~~~~~~vk~ia~~~~g~TvNDvllA~~a~aL~ryl~~ 253 (307)
+....--.++++++|++. |.|-+.++-.| ++.|+..
T Consensus 7 v~l~~~l~~~Ld~~a~~~-g~srS~~ir~a----i~~~l~~ 42 (45)
T 2cpg_A 7 ITLSESVLENLEKMAREM-GLSKSAMISVA----LENYKKG 42 (45)
T ss_dssp EEEEHHHHHHHHHHHHHH-TCCHHHHHHHH----HHHHHHC
T ss_pred EecCHHHHHHHHHHHHHH-CcCHHHHHHHH----HHHHHHH
Confidence 445555577899999999 99998887555 4566554
No 29
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=33.03 E-value=19 Score=30.13 Aligned_cols=28 Identities=21% Similarity=0.364 Sum_probs=23.0
Q ss_pred EEEeeccccccchHHHHHHHhccccCCC
Q 021833 121 VFRIHHALGDGISLVSMLLAGCRLADDP 148 (307)
Q Consensus 121 ~~k~HHal~DG~s~~~ll~~l~~~~~~~ 148 (307)
.+.+||.+.||.-+.+|+..+-+.-.+|
T Consensus 190 sls~DHRviDGa~aa~Fl~~l~~~le~p 217 (224)
T 3rqc_A 190 SLSCDHRLIDGAVATRFIVDLKKVIEDP 217 (224)
T ss_dssp EEEEETTTSCHHHHHHHHHHHHHHHTCT
T ss_pred EEEeccceecHHHHHHHHHHHHHHHhCH
Confidence 7999999999999999988876544444
No 30
>2gpe_A Bifunctional protein PUTA; ribbon-helix-helix, DNA-binding domain, proline catabo proline utilization A, DNA binding protein; 1.90A {Escherichia coli} PDB: 2rbf_A* 2jxg_A 2jxh_A 2jxi_A*
Probab=32.91 E-value=84 Score=19.10 Aligned_cols=37 Identities=14% Similarity=0.165 Sum_probs=26.9
Q ss_pred EEEeecChHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHhhh
Q 021833 213 LATATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHR 254 (307)
Q Consensus 213 ~~~~~~~~~~vk~ia~~~~g~TvNDvllA~~a~aL~ryl~~~ 254 (307)
+...+--.++++++|++. |.|.+.++--| +..|+...
T Consensus 8 irl~~~l~~~l~~lA~~~-~rs~s~lir~A----i~~yl~~~ 44 (52)
T 2gpe_A 8 VKLDDATRERIKSAATRI-DRTPHWLIKQA----IFSYLEQL 44 (52)
T ss_dssp EEEEHHHHHHHHHHHHHT-TCCHHHHHHHH----HHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHH-CcCHHHHHHHH----HHHHHHHH
Confidence 344445577899999999 99999997554 55666553
No 31
>2bsq_E FITA, trafficking protein A; transcription, transcription regulation complex, PIN domain, ribbon-helix-helix, DNA binding; HET: 5IU; 3.0A {Neisseria gonorrhoeae} SCOP: a.43.1.8 PDB: 2h1o_E*
Probab=31.10 E-value=66 Score=22.06 Aligned_cols=28 Identities=11% Similarity=0.080 Sum_probs=23.9
Q ss_pred hHHHHHHHHHcCCCchhhHHHHHHHHHHH
Q 021833 220 IDDMKAVKKAIAGATINDVLFGVVSSGLS 248 (307)
Q Consensus 220 ~~~vk~ia~~~~g~TvNDvllA~~a~aL~ 248 (307)
...+|..|+.+ |-|+|+.+..++..++.
T Consensus 13 ~~~Lk~rAa~~-GrSle~e~r~iL~~a~~ 40 (77)
T 2bsq_E 13 HNAIKFRARAA-GRSTEAEIRLILDNIAK 40 (77)
T ss_dssp HHHHHHHHHHT-TCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCCHHHHHHHHHHHHHc
Confidence 45788889999 99999999998887764
No 32
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=30.23 E-value=26 Score=29.69 Aligned_cols=23 Identities=4% Similarity=-0.075 Sum_probs=20.5
Q ss_pred EEEeeccccccchHHHHHHHhcc
Q 021833 121 VFRIHHALGDGISLVSMLLAGCR 143 (307)
Q Consensus 121 ~~k~HHal~DG~s~~~ll~~l~~ 143 (307)
.+.+||.++||.-+.+|+..+-+
T Consensus 211 sls~DHRviDGa~aa~Fl~~lk~ 233 (243)
T 1dpb_A 211 SLSYDCRVINGAAAARFTKRLGD 233 (243)
T ss_dssp EEEEETTTSCHHHHHHHHHHHHH
T ss_pred EEEECcccccHHHHHHHHHHHHH
Confidence 89999999999999999887654
No 33
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=30.17 E-value=26 Score=29.46 Aligned_cols=23 Identities=26% Similarity=0.268 Sum_probs=20.4
Q ss_pred EEEeeccccccchHHHHHHHhcc
Q 021833 121 VFRIHHALGDGISLVSMLLAGCR 143 (307)
Q Consensus 121 ~~k~HHal~DG~s~~~ll~~l~~ 143 (307)
.+.+||.++||.-+.+|+..+-+
T Consensus 199 sls~DHRviDGa~aa~Fl~~lk~ 221 (233)
T 1scz_A 199 ALSYDHRLIDGRESVGFLVTIKE 221 (233)
T ss_dssp EEEEETTTCCHHHHHHHHHHHHH
T ss_pred EEEEcceeechHHHHHHHHHHHH
Confidence 88999999999999999887654
No 34
>2hue_C Histone H4; mini beta sheet, elongated beta sandwhich, DNA binding prote; 1.70A {Xenopus laevis} SCOP: a.22.1.1 PDB: 3nqj_B 1aoi_B 3kwq_B* 1hio_D 2yfv_B
Probab=30.13 E-value=70 Score=22.13 Aligned_cols=36 Identities=11% Similarity=0.304 Sum_probs=31.0
Q ss_pred ecChHHHHHHHHHcCCCc-hhhHHHHHHHHHHHHHHhh
Q 021833 217 TFSIDDMKAVKKAIAGAT-INDVLFGVVSSGLSRYLDH 253 (307)
Q Consensus 217 ~~~~~~vk~ia~~~~g~T-vNDvllA~~a~aL~ryl~~ 253 (307)
.++.+.++++++.. |++ +++-..-.+...+..|+..
T Consensus 10 ~ip~~~I~Riar~~-Gv~rIs~da~~~l~~~l~~~~~~ 46 (84)
T 2hue_C 10 GITKPAIRRLARRG-GVKRISGLIYEETRGVLKVFLEN 46 (84)
T ss_dssp SSCHHHHHHHHHHT-TCCEECTTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHc-CchhccHHHHHHHHHHHHHHHHH
Confidence 47889999999999 996 8888888888888888765
No 35
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=27.22 E-value=23 Score=29.95 Aligned_cols=23 Identities=17% Similarity=0.111 Sum_probs=20.5
Q ss_pred EEEeeccccccchHHHHHHHhcc
Q 021833 121 VFRIHHALGDGISLVSMLLAGCR 143 (307)
Q Consensus 121 ~~k~HHal~DG~s~~~ll~~l~~ 143 (307)
.+.+||.++||.-+.+|+..+-+
T Consensus 207 sls~DHRviDGa~aa~Fl~~lk~ 229 (239)
T 3b8k_A 207 TLSCDHRVVDGAVGAQWLAEFRK 229 (239)
T ss_dssp EECCCCCSSCHHHHHHHHHHHHH
T ss_pred EEEEcceeechHHHHHHHHHHHH
Confidence 89999999999999999887654
No 36
>1y9b_A Conserved hypothetical protein; MCSG, structural genomics, conserved hypoth protein, PSI, protein structure initiative; 2.20A {Vibrio cholerae o1 biovar eltor} SCOP: a.43.1.9
Probab=27.17 E-value=1e+02 Score=21.70 Aligned_cols=38 Identities=11% Similarity=0.177 Sum_probs=29.8
Q ss_pred eecChHHHHHHHHHcCC-CchhhHHHHHHHHHHHHHHhhh
Q 021833 216 ATFSIDDMKAVKKAIAG-ATINDVLFGVVSSGLSRYLDHR 254 (307)
Q Consensus 216 ~~~~~~~vk~ia~~~~g-~TvNDvllA~~a~aL~ryl~~~ 254 (307)
..-..+.+++.|... | .|+||.++.+....-.+-+.++
T Consensus 13 ~~e~k~lI~~AA~~~-G~~s~s~Fv~~aa~~~A~~vi~~~ 51 (90)
T 1y9b_A 13 DVDTQDLLAKAAALA-GMSSINSFVLNAAIEKAKQVIERE 51 (90)
T ss_dssp CHHHHHHHHHHHHHT-TCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhc
Confidence 334456788888899 9 6999999999888877777664
No 37
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=27.08 E-value=31 Score=29.56 Aligned_cols=23 Identities=13% Similarity=0.098 Sum_probs=20.4
Q ss_pred EEEeeccccccchHHHHHHHhcc
Q 021833 121 VFRIHHALGDGISLVSMLLAGCR 143 (307)
Q Consensus 121 ~~k~HHal~DG~s~~~ll~~l~~ 143 (307)
.+.+||.++||.-+.+|+..+-+
T Consensus 227 sls~DHRviDGa~aa~Fl~~lk~ 249 (262)
T 2ii3_A 227 SWSADHRIIDGATVSRFSNLWKS 249 (262)
T ss_dssp EEEEETTTCCHHHHHHHHHHHHH
T ss_pred EEEECcceecHHHHHHHHHHHHH
Confidence 89999999999999999887654
No 38
>1id3_B Histone H4; nucleosome core particle, chromatin, protein/DNA interaction, nucleoprotein, supercoiled DNA; 3.10A {Saccharomyces cerevisiae} SCOP: a.22.1.1
Probab=26.04 E-value=86 Score=22.63 Aligned_cols=38 Identities=13% Similarity=0.321 Sum_probs=32.6
Q ss_pred EeecChHHHHHHHHHcCCCc-hhhHHHHHHHHHHHHHHhh
Q 021833 215 TATFSIDDMKAVKKAIAGAT-INDVLFGVVSSGLSRYLDH 253 (307)
Q Consensus 215 ~~~~~~~~vk~ia~~~~g~T-vNDvllA~~a~aL~ryl~~ 253 (307)
...++.+.|+++++.. |++ +++-..-++...+..|+..
T Consensus 26 i~~ip~~~I~Rlar~~-Gv~rIS~da~~~l~~~le~fi~~ 64 (102)
T 1id3_B 26 IQGITKPAIRRLARRG-GVKRISGLIYEEVRAVLKSFLES 64 (102)
T ss_dssp GGGSCHHHHHHHHHHT-TCCEECTTHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHc-CchhccHHHHHHHHHHHHHHHHH
Confidence 4558899999999999 996 8888888889988888765
No 39
>1taf_B TFIID TBP associated factor 62; transcription initiation, histone fold, complex (TWO transcr factors); 2.00A {Drosophila melanogaster} SCOP: a.22.1.3
Probab=25.79 E-value=1.3e+02 Score=20.20 Aligned_cols=37 Identities=22% Similarity=0.360 Sum_probs=31.8
Q ss_pred eecChHHHHHHHHHcCCC-chhhHHHHHHHHHHHHHHhh
Q 021833 216 ATFSIDDMKAVKKAIAGA-TINDVLFGVVSSGLSRYLDH 253 (307)
Q Consensus 216 ~~~~~~~vk~ia~~~~g~-TvNDvllA~~a~aL~ryl~~ 253 (307)
..+|.+.|+.+++.. |. .++|=....++.-+..++.+
T Consensus 5 s~lp~~~v~~iaes~-Gi~~lsddaa~~LA~dvEyr~~e 42 (70)
T 1taf_B 5 SSISAESMKVIAESI-GVGSLSDDAAKELAEDVSIKLKR 42 (70)
T ss_dssp CCCCHHHHHHHHHHT-TCCCBCHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHH
Confidence 468999999999999 99 89999999998887766654
No 40
>1mnt_A MNT repressor; transcription regulation; NMR {Enterobacteria phage P22} SCOP: a.43.1.1
Probab=25.28 E-value=50 Score=22.53 Aligned_cols=27 Identities=26% Similarity=0.396 Sum_probs=22.2
Q ss_pred hHHHHHHHHHcCCCchhhHHHHHHHHHH
Q 021833 220 IDDMKAVKKAIAGATINDVLFGVVSSGL 247 (307)
Q Consensus 220 ~~~vk~ia~~~~g~TvNDvllA~~a~aL 247 (307)
-..++..|+.. |.|+|..+..++..++
T Consensus 16 h~~L~~~A~~~-grSlN~~I~~~L~~al 42 (76)
T 1mnt_A 16 REKLKFRAEAN-GRSMNSELLQIVQDAL 42 (76)
T ss_dssp HHHHHHTHHHH-TSCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCCHHHHHHHHHHHHh
Confidence 45677889999 9999999988877655
No 41
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=24.93 E-value=76 Score=26.53 Aligned_cols=61 Identities=11% Similarity=0.080 Sum_probs=38.2
Q ss_pred EEEEeecChHHHHHHHHH----------cCCCchhhHHHHHHHHHHHHHHhhhC---CCCCCCCCceEEEEEeee
Q 021833 212 KLATATFSIDDMKAVKKA----------IAGATINDVLFGVVSSGLSRYLDHRS---PNALPEGLRITGLAMVNI 273 (307)
Q Consensus 212 ~~~~~~~~~~~vk~ia~~----------~~g~TvNDvllA~~a~aL~ryl~~~g---~~~~~~~~~l~~~vPvsl 273 (307)
-..+.+++...+.+.+++ . +.|+|++++-|++.||.++=.-.. +++..-.+.+.+++.|+.
T Consensus 30 ~~~~~evdvt~l~~~r~~~k~~~~~~~g~-kls~~~~~ikA~~~Al~~~P~~Na~~~~~~i~~~~~v~igiAV~~ 103 (233)
T 1scz_A 30 LTTFNEVNMKPIMDLRKQYGEAFEKRHGI-RLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVST 103 (233)
T ss_dssp EEEEEEEECHHHHHHHHHHHHHHHHHHSS-CCCSHHHHHHHHHHHHHHCTTTTCEEETTEEECCSSCCEEECEEE
T ss_pred EEEEEEEEcHHHHHHHHHHHhhhhhhcCC-cccHHHHHHHHHHHHHHhChHhhEEEeCCEEEEeCceeEEEEEEc
Confidence 345667777766555322 6 899999999999999998733211 011111245667777764
No 42
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=24.18 E-value=69 Score=27.19 Aligned_cols=41 Identities=7% Similarity=0.048 Sum_probs=32.3
Q ss_pred EEEEeecChHHHHHHHHHcC----CCchhhHHHHHHHHHHHHHHh
Q 021833 212 KLATATFSIDDMKAVKKAIA----GATINDVLFGVVSSGLSRYLD 252 (307)
Q Consensus 212 ~~~~~~~~~~~vk~ia~~~~----g~TvNDvllA~~a~aL~ryl~ 252 (307)
-..+.++++..+.+.+++.. +.|+|++++-|++.||.++=.
T Consensus 40 ~~~~~evDvt~l~~~r~~~k~~~~kls~~~~iikAva~AL~~~P~ 84 (250)
T 3l60_A 40 AKASVEVICAELLRLRDRFVSAAPEITPFALTLRLLVIALKHNVI 84 (250)
T ss_dssp EEEEEEEECHHHHHHHHHHTTTCTTCCHHHHHHHHHHHHHHHCGG
T ss_pred EEEEEEEEHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCHH
Confidence 35678888888887766421 679999999999999998844
No 43
>2ay0_A Bifunctional PUTA protein; ribbon-helix-helix, DNA-binding domain, proline catabo proline utilization A, DNA binding protein; 2.10A {Escherichia coli} SCOP: a.43.1.11
Probab=23.79 E-value=1.2e+02 Score=19.18 Aligned_cols=36 Identities=14% Similarity=0.165 Sum_probs=27.1
Q ss_pred EEeecChHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHhhh
Q 021833 214 ATATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHR 254 (307)
Q Consensus 214 ~~~~~~~~~vk~ia~~~~g~TvNDvllA~~a~aL~ryl~~~ 254 (307)
...+.-.++|+++|++. |.|-+.++- .|+..|+.+.
T Consensus 9 rL~~el~~rL~~lA~~~-~rs~s~lir----eAi~~yl~~~ 44 (58)
T 2ay0_A 9 MLDDATRERIKSAATRI-DRTPHWLIK----QAIFSYLEQL 44 (58)
T ss_dssp EECHHHHHHHHHHHHHT-TCCHHHHHH----HHHHHHHHHC
T ss_pred ECCHHHHHHHHHHHHHH-CcCHHHHHH----HHHHHHHHHH
Confidence 34444467899999999 999999964 5666777764
No 44
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=22.97 E-value=85 Score=26.79 Aligned_cols=39 Identities=10% Similarity=0.161 Sum_probs=29.6
Q ss_pred EEEeecChHHHHHHHHH---------cCCCchhhHHHHHHHHHHHHHHh
Q 021833 213 LATATFSIDDMKAVKKA---------IAGATINDVLFGVVSSGLSRYLD 252 (307)
Q Consensus 213 ~~~~~~~~~~vk~ia~~---------~~g~TvNDvllA~~a~aL~ryl~ 252 (307)
..+.++++..+.+.+++ . +.|+|++++-|++.||+++=.
T Consensus 57 ~~~~evDvt~l~~~r~~~k~~~~~~g~-kls~~~~~ikAva~Al~~~P~ 104 (262)
T 2ii3_A 57 GYCDEVDLTELVKLREELKPIAFARGI-KLSFMPFFLKAASLGLLQFPI 104 (262)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHTTC-CCCSHHHHHHHHHHHHHHCGG
T ss_pred EEEEEEEhHHHHHHHHHHhhhhhhccC-CccHHHHHHHHHHHHHHhChH
Confidence 45677777766655332 5 899999999999999998743
No 45
>3t76_A VANU, transcriptional regulator vanug; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.12A {Enterococcus faecalis} PDB: 3t75_A* 3tyr_A* 3tys_A*
Probab=22.73 E-value=40 Score=23.52 Aligned_cols=21 Identities=14% Similarity=0.324 Sum_probs=18.9
Q ss_pred cChHHHHHHHHHcCCCchhhHH
Q 021833 218 FSIDDMKAVKKAIAGATINDVL 239 (307)
Q Consensus 218 ~~~~~vk~ia~~~~g~TvNDvl 239 (307)
.+++.+..+|+.+ |+++.|++
T Consensus 63 ~s~~~l~kIa~~L-~v~~~~L~ 83 (88)
T 3t76_A 63 VSLTVLLAICEYL-NCDFGDII 83 (88)
T ss_dssp CCHHHHHHHHHHH-TCCGGGTC
T ss_pred cCHHHHHHHHHHH-CcCHHHHh
Confidence 4889999999999 99999875
No 46
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=22.71 E-value=65 Score=27.03 Aligned_cols=59 Identities=10% Similarity=0.144 Sum_probs=36.9
Q ss_pred EEeecChHHHHHHHHH--------cCCCchhhHHHHHHHHHHHHHHhhhC---CCCCCCCCceEEEEEeee
Q 021833 214 ATATFSIDDMKAVKKA--------IAGATINDVLFGVVSSGLSRYLDHRS---PNALPEGLRITGLAMVNI 273 (307)
Q Consensus 214 ~~~~~~~~~vk~ia~~--------~~g~TvNDvllA~~a~aL~ryl~~~g---~~~~~~~~~l~~~vPvsl 273 (307)
.+.+++...+.+.+++ . +.|+|++++-|++.||+++=.-.. +++..-.+.+.+++.|+.
T Consensus 40 ~~~evDvt~l~~~r~~~k~~~~~~~-kls~~~~~ikAv~~Al~~~P~~Na~~~~~~i~~~~~v~igvAV~~ 109 (239)
T 3b8k_A 40 LSIDVNMGEVLLVRKELNKILEGRS-KISVNDFIIKASALACLKVPEANSSWMDTVIRQNHVVDVSVAVST 109 (239)
T ss_dssp EEEEECCTTHHHHHHHTHHHHTTSS-CCCHHHHHHHHHHHHHHHCCCSCTTSCCCSSSCSCCCCEEECEEC
T ss_pred EEEEEEcHHHHHHHHHHHhhhhccC-CCCHHHHHHHHHHHHHHhChHhhEEEECCEEEEeCceeEEEEEEc
Confidence 3455555555444332 6 899999999999999997732110 012222356778888764
No 47
>3kk4_A Uncharacterized protein BP1543; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: CME; 1.95A {Bordetella pertussis tohama I}
Probab=20.85 E-value=1.5e+02 Score=22.27 Aligned_cols=29 Identities=7% Similarity=0.148 Sum_probs=24.0
Q ss_pred EEEeecChHHHHHHHHHcCCCchhhHHHHH
Q 021833 213 LATATFSIDDMKAVKKAIAGATINDVLFGV 242 (307)
Q Consensus 213 ~~~~~~~~~~vk~ia~~~~g~TvNDvllA~ 242 (307)
+.....=-+.+++||++. |.|+|.++.-.
T Consensus 32 IrLE~~FW~~L~eIA~~~-g~tv~~Lia~I 60 (125)
T 3kk4_A 32 VRLEQLFWDVLEEIAARD-GMRVTQLIERL 60 (125)
T ss_dssp EEEEHHHHHHHHHHHHHT-TCCHHHHHHHH
T ss_pred eehhHHHHHHHHHHHHHc-CCCHHHHHHHH
Confidence 555566677899999999 99999998775
Done!