BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021834
(307 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8JHV9|BIR7A_XENLA Baculoviral IAP repeat-containing protein 7-A OS=Xenopus laevis
GN=birc7-a PE=1 SV=1
Length = 401
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 56/136 (41%), Gaps = 7/136 (5%)
Query: 178 IAQENEAMVF--SLNNSLEQLKEKAFCCFNNGVEDAESCCDVEEEETEQNRVIGIGFG-- 233
+AQ+ M F SL SL Q K + V D + V EEET + +
Sbjct: 265 VAQDALQMGFKQSLVASLIQSKFLLTGSSYSSVSDLVTDLLVAEEETHSTESVSVSRAPT 324
Query: 234 ---ESNNNYNYKGAAETEQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDT 290
S TE++ R K +CK C +D +LF+PC HL C C L
Sbjct: 325 RMERSEPPKESAPPLSTEEQLRRLKEERMCKVCMDKDVSMLFVPCGHLVVCTECAPNLRH 384
Query: 291 CPVCLTPKKASIEALI 306
CP+C + S+ A +
Sbjct: 385 CPICRAAIRGSVRAFM 400
>sp|A5D8Q0|XIAP_XENLA E3 ubiquitin-protein ligase XIAP OS=Xenopus laevis GN=xiap PE=2
SV=2
Length = 488
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 248 EQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVCLT 296
E++ R + VCK C R ++F+PC HL AC C LD CP+C T
Sbjct: 429 EEKLRQLEEEKVCKVCMDRRITIVFIPCGHLVACAVCADVLDKCPICCT 477
>sp|P98170|XIAP_HUMAN E3 ubiquitin-protein ligase XIAP OS=Homo sapiens GN=XIAP PE=1 SV=2
Length = 497
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 247 TEQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVCLT 296
TE++ R + +CK C R+ ++F+PC HL C+ C +D CP+C T
Sbjct: 437 TEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCYT 486
>sp|Q5BKL8|XIAP_XENTR E3 ubiquitin-protein ligase XIAP OS=Xenopus tropicalis GN=xiap PE=2
SV=1
Length = 492
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 248 EQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVCLT 296
E++ R + +CK C R ++F+PC HL AC C LD CP+C T
Sbjct: 433 EEKLRQLEEEKICKVCMDRRISIVFIPCGHLVACAVCADVLDKCPICCT 481
>sp|Q60989|XIAP_MOUSE E3 ubiquitin-protein ligase XIAP OS=Mus musculus GN=Xiap PE=1 SV=2
Length = 496
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 247 TEQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVCLT 296
TE++ R + +CK C R+ ++F+PC HL C+ C +D CP+C T
Sbjct: 436 TEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCYT 485
>sp|A9ULZ2|BIR7B_XENLA Baculoviral IAP repeat-containing protein 7-B OS=Xenopus laevis
GN=birc7-b PE=2 SV=2
Length = 345
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 233 GESNNNYNYKGAA-ETEQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTC 291
GE + G TE++ + K +CK C +D +LF+PC HL C C L C
Sbjct: 270 GERSEPPKVSGPPLSTEEQLQRLKEERMCKVCMDKDVSMLFVPCGHLVVCTECAPNLRHC 329
Query: 292 PVCLTPKKASIEALI 306
P+C + S+ A +
Sbjct: 330 PICRAAIRGSVRAFM 344
>sp|Q9R0I6|XIAP_RAT E3 ubiquitin-protein ligase XIAP OS=Rattus norvegicus GN=Xiap PE=2
SV=1
Length = 496
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 247 TEQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVCLT 296
TE++ R + +CK C R+ ++F+PC HL C+ C +D CP+C T
Sbjct: 436 TEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCCT 485
>sp|A9JTP3|BIRC7_XENTR Baculoviral IAP repeat-containing protein 7 OS=Xenopus tropicalis
GN=birc7 PE=2 SV=1
Length = 365
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%)
Query: 247 TEQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVCLTPKKASIEALI 306
TE++ R K +CK C D ++F+PC HL C C L CP+C + S+ A +
Sbjct: 305 TEEQLRQLKEERMCKVCMDNDVSMVFVPCGHLVVCTECAPNLRHCPICRAAIRGSVRAFM 364
>sp|O08863|BIRC3_MOUSE Baculoviral IAP repeat-containing protein 3 OS=Mus musculus
GN=Birc3 PE=1 SV=2
Length = 600
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 243 GAAETEQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVCLTPKKASI 302
A E++ R + +CK C R+ ++F+PC HL C+ C L CP+C K ++
Sbjct: 536 AALPMEEQLRKLQEERMCKVCMDREVSIVFIPCGHLVVCKDCAPSLRKCPICRGTIKGTV 595
Query: 303 EALI 306
+
Sbjct: 596 RTFL 599
>sp|Q13489|BIRC3_HUMAN Baculoviral IAP repeat-containing protein 3 OS=Homo sapiens
GN=BIRC3 PE=1 SV=2
Length = 604
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 247 TEQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVCLTPKKASIEALI 306
E++ R + CK C ++ ++F+PC HL C+ C L CP+C + K ++ +
Sbjct: 544 VEEQLRRLQEERTCKVCMDKEVSIVFIPCGHLVVCKDCAPSLRKCPICRSTIKGTVRTFL 603
>sp|Q62210|BIRC2_MOUSE Baculoviral IAP repeat-containing protein 2 OS=Mus musculus
GN=Birc2 PE=1 SV=1
Length = 612
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 249 QEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVCLTPKKASIEALI 306
QE+R+ CK C R+ ++F+PC HL C+ C L CP+C K ++ +
Sbjct: 560 QEERT------CKVCMDREVSIVFIPCGHLVVCQECAPSLRKCPICRGTIKGTVRTFL 611
>sp|Q95M71|BIRC8_GORGO Baculoviral IAP repeat-containing protein 8 OS=Gorilla gorilla
gorilla GN=BIRC8 PE=2 SV=1
Length = 236
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 259 VCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVC 294
+CK C R V+F+PC HL C+ C +D CP+C
Sbjct: 188 LCKICMDRHIAVVFIPCGHLVTCKQCAEAVDRCPMC 223
>sp|Q96P09|BIRC8_HUMAN Baculoviral IAP repeat-containing protein 8 OS=Homo sapiens
GN=BIRC8 PE=1 SV=2
Length = 236
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 259 VCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVC 294
+CK C R V+F+PC HL C+ C +D CP+C
Sbjct: 188 LCKICMDRHIAVVFIPCGHLVTCKQCAEAVDRCPMC 223
>sp|Q95M72|BIRC8_PANTR Baculoviral IAP repeat-containing protein 8 OS=Pan troglodytes
GN=BIRC8 PE=2 SV=1
Length = 236
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 259 VCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVC 294
+CK C R V+F+PC HL C+ C +D CP+C
Sbjct: 188 LCKICMDRHIAVVFIPCGHLVTCKQCAEAVDRCPMC 223
>sp|A1E2V0|BIRC3_CANFA Baculoviral IAP repeat-containing protein 3 OS=Canis familiaris
GN=BIRC3 PE=2 SV=1
Length = 604
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 247 TEQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVCLTPKKASIEALI 306
E++ R + CK C ++ ++F+PC HL CR C L CP+C + ++ +
Sbjct: 544 VEEQLRRLQEERTCKVCMDKEVSIVFIPCGHLVVCRDCAPSLRKCPICRGTVRGTVRTFL 603
>sp|Q90660|BIR_CHICK Inhibitor of apoptosis protein OS=Gallus gallus GN=ITA PE=2 SV=1
Length = 611
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 249 QEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVCLTPKKASIEALI 306
QE+R+ CK C ++ ++F+PC HL C+ C L CP+C K ++ +
Sbjct: 559 QEERT------CKVCMDKEVSIVFIPCGHLVVCKECAPSLRKCPICRGTIKGTVRTFL 610
>sp|O62640|PIAP_PIG Putative inhibitor of apoptosis OS=Sus scrofa GN=PIAP PE=2 SV=1
Length = 358
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 248 EQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVCLTPKKASIEALI 306
E++ R + CK C ++ ++F+PC HL C+ C L CP+C K ++ +
Sbjct: 299 EEQLRRLQEERTCKVCMDKEVSIVFIPCGHLVVCKDCAPSLRKCPICRGTIKGTVRTFL 357
>sp|Q24307|IAP2_DROME Apoptosis 2 inhibitor OS=Drosophila melanogaster GN=Iap2 PE=2 SV=3
Length = 498
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 243 GAAETEQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVCLTPKKASI 302
G E+E R K +CK C + V+FLPC HL C C + CP+C +A I
Sbjct: 434 GNLSLEEENRQLKDARLCKVCLDEEVGVVFLPCGHLATCNQCAPSVANCPMC----RADI 489
Query: 303 EALI 306
+ +
Sbjct: 490 KGFV 493
>sp|Q13490|BIRC2_HUMAN Baculoviral IAP repeat-containing protein 2 OS=Homo sapiens
GN=BIRC2 PE=1 SV=2
Length = 618
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 249 QEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVCLTPKKASIEALI 306
QE+R+ CK C ++ V+F+PC HL C+ C L CP+C K ++ +
Sbjct: 566 QEERT------CKVCMDKEVSVVFIPCGHLVVCQECAPSLRKCPICRGIIKGTVRTFL 617
>sp|Q96CA5|BIRC7_HUMAN Baculoviral IAP repeat-containing protein 7 OS=Homo sapiens
GN=BIRC7 PE=1 SV=2
Length = 298
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 242 KGAAETEQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVCLTPKKAS 301
GA + E + R + CK C R ++F+PC HL C C L CP+C P ++
Sbjct: 234 PGARDVEAQLRRLQEERTCKVCLDRAVSIVFVPCGHL-VCAECAPGLQLCPICRAPVRSR 292
Query: 302 IEALI 306
+ +
Sbjct: 293 VRTFL 297
>sp|Q7ZUL9|MGRN1_DANRE Probable E3 ubiquitin-protein ligase MGRN1 OS=Danio rerio GN=mgrn1
PE=2 SV=1
Length = 529
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 232 FGESNNNYNYKGAAETEQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFL--- 288
+G N N + E E S++ V VC + RD+ L LPCRHLC C AC L
Sbjct: 252 YGIENRNNQETKSTEDENSDNSSECV-VCLS-DLRDT--LILPCRHLCLCNACADTLRYQ 307
Query: 289 -DTCPVCLTPKKA 300
+ CP+C P +A
Sbjct: 308 ANNCPICRLPFRA 320
>sp|Q6INH1|RN157_XENLA RING finger protein 157 OS=Xenopus laevis GN=rnf157 PE=2 SV=1
Length = 674
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 237 NNYNYKGAAETEQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFL----DTCP 292
N YN + + E E V + RD+ L LPCRHLC C AC L CP
Sbjct: 256 NKYNSQDSKVAEDELSDNSAECVVCLSDVRDT--LILPCRHLCLCNACADTLRYQASNCP 313
Query: 293 VCLTPKKA 300
+C P +A
Sbjct: 314 ICRLPFRA 321
>sp|Q96PX1|RN157_HUMAN RING finger protein 157 OS=Homo sapiens GN=RNF157 PE=1 SV=3
Length = 679
Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 237 NNYNYKGAAETEQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFL----DTCP 292
N YN + + E E V + RD+ L LPCRHLC C C L + CP
Sbjct: 256 NKYNTQDSKVAEDEVSDNSAECVVCLSDVRDT--LILPCRHLCLCNTCADTLRYQANNCP 313
Query: 293 VCLTPKKA 300
+C P +A
Sbjct: 314 ICRLPFRA 321
>sp|Q8BUH7|RNF26_MOUSE Ring finger protein 26 OS=Mus musculus GN=Rnf26 PE=2 SV=1
Length = 424
Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 12/54 (22%)
Query: 248 EQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFL-------DTCPVC 294
EQE+R C C + VL LPCRHLC C+AC L CP+C
Sbjct: 364 EQEERKK-----CVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLC 412
>sp|Q80SY4|MIB1_MOUSE E3 ubiquitin-protein ligase MIB1 OS=Mus musculus GN=Mib1 PE=1 SV=1
Length = 1006
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 248 EQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVC 294
EQ Q TK + C C+ + + VLF PC H+CAC C + + C C
Sbjct: 855 EQVQSRTK-IEECVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQC 900
>sp|Q804S5|MIB1_DANRE E3 ubiquitin-protein ligase mib1 OS=Danio rerio GN=mib1 PE=1 SV=1
Length = 1030
Score = 40.0 bits (92), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 248 EQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVC 294
EQ Q TK + C C+ + + VLF PC H+CAC C + + C C
Sbjct: 853 EQVQSRTK-IEECVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQC 898
>sp|Q6GNY1|MIB1_XENLA E3 ubiquitin-protein ligase mib1 OS=Xenopus laevis GN=mib1 PE=2
SV=1
Length = 1011
Score = 39.7 bits (91), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 248 EQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVC 294
EQ Q TK + C C+ + + VLF PC H+CAC C + + C C
Sbjct: 856 EQVQSRTK-IEECVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQC 901
>sp|Q5XIQ4|MGRN1_RAT E3 ubiquitin-protein ligase MGRN1 OS=Rattus norvegicus GN=Mgrn1
PE=2 SV=1
Length = 533
Score = 39.7 bits (91), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 232 FGESNNNYNYKGAAETEQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFL--- 288
+G N N ++ E S++ V VC + RD+ L LPCRHLC C +C L
Sbjct: 255 YGIENKNNQETKPSDDENSDNSSECV-VCLS-DLRDT--LILPCRHLCLCTSCADTLRYQ 310
Query: 289 -DTCPVCLTPKKA 300
+ CP+C P +A
Sbjct: 311 ANNCPICRLPFRA 323
>sp|Q9D074|MGRN1_MOUSE E3 ubiquitin-protein ligase MGRN1 OS=Mus musculus GN=Mgrn1 PE=1
SV=2
Length = 532
Score = 39.7 bits (91), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Query: 232 FGESNNNYNYKGAAETEQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFL--- 288
+G N N ++ E S++ C C S L LPCRHLC C +C L
Sbjct: 254 YGIENKNNQETKPSDDENSDNSSE----CVVCLSDLRDTLILPCRHLCLCTSCADTLRYQ 309
Query: 289 -DTCPVCLTPKKA 300
+ CP+C P +A
Sbjct: 310 ANNCPICRLPFRA 322
>sp|Q9BY78|RNF26_HUMAN RING finger protein 26 OS=Homo sapiens GN=RNF26 PE=2 SV=1
Length = 433
Score = 39.7 bits (91), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 12/54 (22%)
Query: 248 EQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFL-------DTCPVC 294
EQE+R C C + VL LPCRHLC C+AC L CP+C
Sbjct: 373 EQEERKK-----CVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRNCPLC 421
>sp|P41437|IAP3_NPVOP E3 ubiquitin-protein ligase IAP-3 OS=Orgyia pseudotsugata
multicapsid polyhedrosis virus GN=IAP3 PE=1 SV=1
Length = 268
Score = 39.7 bits (91), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 259 VCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVC 294
+CK C + V F+PC H+ AC C A + TCPVC
Sbjct: 220 LCKICLGAEKTVCFVPCGHVVACGKCAAGVTTCPVC 255
>sp|Q3TEL6|RN157_MOUSE RING finger protein 157 OS=Mus musculus GN=Rnf157 PE=2 SV=2
Length = 685
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 237 NNYNYKGAAETEQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFL----DTCP 292
N YN + + E + V + RD+ L LPCRHLC C C L + CP
Sbjct: 256 NKYNTQDSKVAEDDVSDNSAECVVCLSDVRDT--LILPCRHLCLCNTCADTLRYQANNCP 313
Query: 293 VCLTPKKA 300
+C P +A
Sbjct: 314 ICRLPFRA 321
>sp|Q9VUX2|MIB_DROME E3 ubiquitin-protein ligase mind-bomb OS=Drosophila melanogaster
GN=mib1 PE=1 SV=3
Length = 1226
Score = 38.9 bits (89), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 260 CKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVCLT 296
C C+ R + V F PC H+ AC C A + C +C T
Sbjct: 1017 CLVCSDRRAAVFFRPCGHMVACEHCSALMKKCVLCRT 1053
>sp|Q86YT6|MIB1_HUMAN E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens GN=MIB1 PE=1 SV=1
Length = 1006
Score = 38.9 bits (89), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 248 EQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVC 294
EQ Q TK + C C+ + + VLF PC H+CAC C + C C
Sbjct: 855 EQVQSRTK-IEECVVCSDKKAAVLFQPCGHMCACENCANLMKKCVQC 900
>sp|O60291|MGRN1_HUMAN E3 ubiquitin-protein ligase MGRN1 OS=Homo sapiens GN=MGRN1 PE=1
SV=2
Length = 552
Score = 38.5 bits (88), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
Query: 232 FGESNNNYNYKGAAETEQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFL--- 288
+G N N ++ E S + V VC + RD+ L LPCRHLC C +C L
Sbjct: 254 YGIENKNNQETKPSDDENSDNSNECV-VCLS-DLRDT--LILPCRHLCLCTSCADTLRYQ 309
Query: 289 -DTCPVCLTPKKA 300
+ CP+C P +A
Sbjct: 310 ANNCPICRLPFRA 322
>sp|P97587|CGRF1_RAT Cell growth regulator with RING finger domain protein 1 OS=Rattus
norvegicus GN=Cgrrf1 PE=2 SV=1
Length = 332
Score = 38.5 bits (88), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 243 GAAETEQEQRSTKMVMVCK--GCNSRDSCVLFLPCRHLCACRACEAFLDTCPVC 294
AE + + S+K +VC+ G N + LPCRH C C +C + CP+C
Sbjct: 260 AGAEVDPVEESSKDCVVCQNGGVNW-----VLLPCRHACLCDSCVCYFKQCPMC 308
>sp|Q8BM54|MYLIP_MOUSE E3 ubiquitin-protein ligase MYLIP OS=Mus musculus GN=Mylip PE=1
SV=1
Length = 445
Score = 38.1 bits (87), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 248 EQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVC 294
+++ R K M+C C + F PC H C +C A L +CPVC
Sbjct: 375 QEKLRKLKEAMLCMACCEEEINSTFCPCGHTVCCESCAAQLQSCPVC 421
>sp|P41454|IAP2_NPVAC Probable apoptosis inhibitor 2 OS=Autographa californica nuclear
polyhedrosis virus GN=IAP2 PE=4 SV=1
Length = 249
Score = 38.1 bits (87), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 24/52 (46%)
Query: 254 TKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVCLTPKKASIEAL 305
T+ V CK C R+ V F+PCRHL C C C VC IE L
Sbjct: 196 TQQVSECKVCFDREKSVCFMPCRHLAVCTECSRRCKRCCVCNAKIMQRIETL 247
>sp|Q91FJ2|332L_IIV6 Uncharacterized RING finger protein 332L OS=Invertebrate iridescent
virus 6 GN=IIV6-332L PE=3 SV=1
Length = 234
Score = 37.7 bits (86), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 237 NNYNYKGAAETEQEQRSTKMVMV-CKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVCL 295
NN + G TE E+ + V C C CVLF C+H+ C C + CPVC
Sbjct: 161 NNEEFTGTIPTEVEEENEAHETVRCAVCLHNKVCVLFQKCKHVITCGPCSLRIKECPVCK 220
Query: 296 TPKKASIEALIF 307
++S + IF
Sbjct: 221 RIVESSDKIRIF 232
>sp|O55756|VF157_IIV6 Putative RING finger protein 157L OS=Invertebrate iridescent virus
6 GN=IIV6-157L PE=3 SV=1
Length = 152
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 246 ETEQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVC 294
E +++++ + C C + C+ PC H C++C L+TCP+C
Sbjct: 97 EATNDKKASSIDSRCVVCYENEICIKIQPCNHFVVCKSCFNRLNTCPMC 145
>sp|D3ZDI6|MYLIP_RAT E3 ubiquitin-protein ligase MYLIP OS=Rattus norvegicus GN=Mylip
PE=2 SV=1
Length = 445
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 248 EQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVC 294
+++ R K M+C C + F PC H C +C A L +CPVC
Sbjct: 375 QEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPVC 421
>sp|A2AWP0|BIRC7_MOUSE Baculoviral IAP repeat-containing protein 7 OS=Mus musculus
GN=Birc7 PE=2 SV=1
Length = 285
Score = 37.0 bits (84), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 238 NYNYKGAAETEQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVCLTP 297
+ + GA + +++ R + CK C R ++F+PC H C C L CP+C P
Sbjct: 217 DVSEPGAKDVQEQLRQLQEERRCKVCLDRAVSIVFVPCGHF-VCTECAPNLQLCPICRVP 275
>sp|P41436|IAP_GVCPM Apoptosis inhibitor IAP OS=Cydia pomonella granulosis virus
(isolate Mexico/1963) GN=IAP PE=4 SV=1
Length = 275
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 259 VCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVC 294
+CK C + V F+PC H+ AC C +D CP+C
Sbjct: 227 LCKICYVEECIVCFVPCGHVVACAKCALSVDKCPMC 262
>sp|Q8WY64|MYLIP_HUMAN E3 ubiquitin-protein ligase MYLIP OS=Homo sapiens GN=MYLIP PE=1
SV=2
Length = 445
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 248 EQEQRSTKMVMVCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVC 294
+++ R K M+C C + F PC H C +C A L +CPVC
Sbjct: 375 QEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPVC 421
>sp|Q9ZVT8|RF4_ARATH Putative E3 ubiquitin-protein ligase RF4 OS=Arabidopsis thaliana
GN=RF4 PE=3 SV=1
Length = 823
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 30/207 (14%)
Query: 101 KQRQEIDHYIISQNERLRLVLQEQRKQQLEVLLKKIEIKTSALLRQKDEEIAKATNRTME 160
K+R E I E +++LQE+ K Q E K + L + E+ KA NR +
Sbjct: 618 KERGERSLKDIHSWEGQKIMLQEELKGQRE--------KVTVLQK----EVTKAKNRQNQ 665
Query: 161 LEILLK-------KLEMESQAWQRIAQENEAMVFSLNNSLEQLKEKAFCCFNNGVEDAES 213
+E LK KL ++ ++ +E EA+ ++ E + + ++ E
Sbjct: 666 IEAALKQERTAKGKLSAQASLIRKETKELEALGKVEEERIKGKAETDVKYYIDNIKRLER 725
Query: 214 CCDVEEEETEQNRVIGIGFGESNNNYNYKGAAETEQEQRSTKMVMVCKGCNSRDSCVLFL 273
+ +++ +R+I + G S + + + + +R + VM C S + V+FL
Sbjct: 726 EISELKLKSDYSRIIALKKGSSESKATKRESLGMPKVKRERECVM----CLSEEMSVIFL 781
Query: 274 PCRHLCACRAC------EAFLDTCPVC 294
PC H C C E +D CP C
Sbjct: 782 PCAHQVLCFKCNQLHEKEGMMD-CPSC 807
>sp|Q8IDX6|RBP2A_PLAF7 Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum
(isolate 3D7) GN=PF13_0198 PE=3 SV=1
Length = 3130
Score = 35.4 bits (80), Expect = 0.48, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 77 QHQQQRNQNFDSMPFSQSLALQAEKQRQEIDHYIISQNERLRLVLQEQ-RKQQLEVLLKK 135
+ +Q+R Q + + + L+ EKQ Q + + E+ RL +E ++Q+ E L K+
Sbjct: 2741 RQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKE 2800
Query: 136 IEIKTSA---LLRQKDEEIAKATN-RTMELEILLKKLEMESQAWQRIAQENE 183
E+K L R+K E++ K + E E L K+ ++ Q +R+ +E E
Sbjct: 2801 EELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEE 2852
Score = 32.3 bits (72), Expect = 4.1, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 72 QQQQLQHQQQ-RNQNFDSMPFSQSLALQAEKQRQEIDHYIISQNERLRLVLQEQRKQQLE 130
+Q+QLQ +++ + Q + + ++L Q +++ Q+ + + ERL QEQ +++ E
Sbjct: 2765 KQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEE 2824
Query: 131 VLLKKIE--IKTSALLRQKDEEIAKAT--NRTMELEILLKKLEMESQAWQRIAQENEAMV 186
+ ++ E K AL RQ+ E + K R + + KK+E+ + ++ MV
Sbjct: 2825 LKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLERKKIELAEREQHIKSKLESDMV 2884
Query: 187 FSLNNSLEQLKEK 199
+ + L + K++
Sbjct: 2885 KIIKDELTKEKDE 2897
>sp|P79065|TIP1_SCHPO Tip elongation protein 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=tip1 PE=1 SV=1
Length = 461
Score = 35.4 bits (80), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 10/156 (6%)
Query: 15 GLGLGFGYGINPLLGGGGSSPQDLIVDNACCGVGVNGSNGFCFDMQPQKLRQHPQHMQQQ 74
G G G P+ SS L ++ + +N + + L++ + + +
Sbjct: 89 GTAASIGMGFPPMSPNLQSSIPRLTNVSSSSNLSMNTISSTALTPTEKILQKRIEDLLYE 148
Query: 75 QLQHQQQRNQNFDSMPFSQSLALQAEKQRQEIDHYIISQNERLRLVLQEQRKQQL--EVL 132
+ HQQQ + ++ QSL Q+ E+D R R+ L+E+R QQ+ E
Sbjct: 149 RQNHQQQLEEVLATVDQLQSLVTNFNDQQDEVDEL------RERITLKEERIQQMRNEAS 202
Query: 133 LKKIEIKTSA--LLRQKDEEIAKATNRTMELEILLK 166
++ E KT+ L + I NR ELE L+
Sbjct: 203 QRRFEFKTTIECLEESSNRAIETYENRIAELEAQLE 238
>sp|Q99675|CGRF1_HUMAN Cell growth regulator with RING finger domain protein 1 OS=Homo
sapiens GN=CGRRF1 PE=1 SV=1
Length = 332
Score = 35.0 bits (79), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 260 CKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVC 294
C C + + LPCRH C C C + CP+C
Sbjct: 274 CVVCQNGTVNWVLLPCRHTCLCDGCVKYFQQCPMC 308
>sp|Q9UPN4|AZI1_HUMAN 5-azacytidine-induced protein 1 OS=Homo sapiens GN=AZI1 PE=1 SV=3
Length = 1083
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Query: 77 QHQQQRNQNFDSMPFSQSLALQAEKQRQEIDHYIISQNERLRLVLQEQRKQQLEVLLKKI 136
Q +++ Q F + ALQ +QRQ + + + ERL QR + LE L +++
Sbjct: 769 QERERARQRFQQHLEQEQWALQ--QQRQRLYSEVAEERERLGQQAARQRAE-LEELRQQL 825
Query: 137 EIKTSALLRQKDEEIAKAT-----NRTMELEILLKKLEMESQAWQ 176
E +SAL R E K MEL L ++LE+E QAW+
Sbjct: 826 EESSSALTRALRAEFEKGREEQERRHQMELNTLKQQLELERQAWE 870
>sp|Q557E7|CBLA_DICDI E3 ubiquitin-protein ligase cblA OS=Dictyostelium discoideum
GN=cblA-1 PE=1 SV=1
Length = 665
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 259 VCKGCNSRDSCVLFLPCRHLCACRACEAFLDTCPVC 294
+C C + +FL C HL C C L CP+C
Sbjct: 617 LCTVCMDNEINTVFLECGHLSCCSLCSVKLKKCPIC 652
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,112,030
Number of Sequences: 539616
Number of extensions: 4678788
Number of successful extensions: 47396
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 912
Number of HSP's that attempted gapping in prelim test: 27207
Number of HSP's gapped (non-prelim): 10231
length of query: 307
length of database: 191,569,459
effective HSP length: 117
effective length of query: 190
effective length of database: 128,434,387
effective search space: 24402533530
effective search space used: 24402533530
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)