BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021837
(307 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CEU2|PHEA_LACLA Prephenate dehydratase OS=Lactococcus lactis subsp. lactis (strain
IL1403) GN=pheA PE=4 SV=1
Length = 279
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 44/117 (37%), Gaps = 8/117 (6%)
Query: 128 KKRCCEEDQCTFAGTYLELRKHAQLEHPHSRPSKIDPARQLDWENFQQSS-EIIDVLSTI 186
K E + L L K ++EH +S P + R E++ Q+ EI D S
Sbjct: 71 KATVVAEFVLPISQNLLALSKEGKIEHIYSHPQALAQTRNYLREHYPQAKVEITDSTSAA 130
Query: 187 ------HSEVPRGVVLGDYVIEYGDDE-TGDEFEDFPGDEGNWWTSCILYQVFDNLR 236
H ++P V Y + D E +D G+ +W + FD L+
Sbjct: 131 AEFVKNHPDLPIAAVANSYAAKMYDLEIVAKNIQDLAGNSTRFWLLGKEKKSFDLLK 187
>sp|P50214|IDH_NOSS1 Isocitrate dehydrogenase [NADP] OS=Nostoc sp. (strain PCC 7120 /
UTEX 2576) GN=icd PE=3 SV=1
Length = 473
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 17/83 (20%)
Query: 78 VSPPSTSEVNSAANTQPMVSEDSCRPACPLCRGEVTG---WVVADKVRDYLNEK------ 128
++PP+T E + N +P+V ++ P P RG+ TG W +KV D K
Sbjct: 5 ITPPTTGEKITFKNGEPVVPDN---PIIPFIRGDGTGIDIWPATEKVLDAAVAKAYQGKR 61
Query: 129 -----KRCCEEDQCTFAGTYLEL 146
K ++ C GTY L
Sbjct: 62 KISWFKVYAGDEACDLYGTYQYL 84
>sp|Q4P0V4|PPID_USTMA Peptidyl-prolyl cis-trans isomerase D OS=Ustilago maydis (strain
521 / FGSC 9021) GN=CPR6 PE=3 SV=1
Length = 398
Score = 32.0 bits (71), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 14/82 (17%)
Query: 180 IDVLSTIHSEVPR--------GVVLGDYVIE--YG--DDETGDEFEDFPGDEGNWWTSCI 227
++ + T+ S+ P+ G + GD V YG D+TGD++EDFP D+ + S +
Sbjct: 163 VESVETVASDRPKEDVKIVDCGELTGDEVSNQTYGIEQDDTGDQYEDFPEDQDDKLESDV 222
Query: 228 --LYQVFDNLRNARNRRRSRVS 247
Y + L+N N + S+ +
Sbjct: 223 SATYHIGLALKNMANTQFSKAN 244
>sp|P36126|SPO14_YEAST Phospholipase D1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SPO14 PE=1 SV=3
Length = 1683
Score = 31.6 bits (70), Expect = 6.9, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 51/127 (40%), Gaps = 19/127 (14%)
Query: 161 KIDPARQL-DWENFQQSSEIIDVLSTIHSEVPRGVVLGDYVIEYGDDETGDEFEDFPGDE 219
K D QL +W +S+++D I SE+P G +Y+ D E D
Sbjct: 1343 KADATEQLKEWALNSLASKVLDDKEMIKSEIPEG--FSNYLPNEKDLEM--YLTDKTVTN 1398
Query: 220 GNWWTS----CILYQVFDNLRNARNRRRSRVSDTRRGSRRSSYDTSN----------SDE 265
N W+ C L + L + +R ++ D RR S+ T N S+E
Sbjct: 1399 RNKWSMLKRICYLQYLSHKLDERKTQRLKKIKDMRRHLSSSTESTRNGSNSLPLNEKSNE 1458
Query: 266 GSVTSVD 272
G T+VD
Sbjct: 1459 GESTNVD 1465
>sp|Q27991|MYH10_BOVIN Myosin-10 OS=Bos taurus GN=MYH10 PE=2 SV=2
Length = 1976
Score = 31.6 bits (70), Expect = 8.0, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 13/108 (12%)
Query: 111 EVTGWVVADKVRDYLNEKKRCCEE--DQCTF-------AGTYLELRKHAQLE----HPHS 157
+VTG++V + YL EK R + D+ TF +G L+ LE +
Sbjct: 251 DVTGYIVGANIETYLLEKSRAVRQAKDERTFHIFYQLLSGAGEHLKSDLLLEGFNNYRFL 310
Query: 158 RPSKIDPARQLDWENFQQSSEIIDVLSTIHSEVPRGVVLGDYVIEYGD 205
I Q D +NFQ++ E + ++ H E+ + + V+++G+
Sbjct: 311 SNGYIPIPGQQDKDNFQETMEAMHIMGFSHEEILSMLKVVSSVLQFGN 358
>sp|Q9JLT0|MYH10_RAT Myosin-10 OS=Rattus norvegicus GN=Myh10 PE=1 SV=1
Length = 1976
Score = 31.6 bits (70), Expect = 8.3, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 13/108 (12%)
Query: 111 EVTGWVVADKVRDYLNEKKRCCEE--DQCTF-------AGTYLELRKHAQLE----HPHS 157
+VTG++V + YL EK R + D+ TF +G L+ LE +
Sbjct: 251 DVTGYIVGANIETYLLEKSRAVRQAKDERTFHIFYQLLSGAGEHLKSDLLLEGFNNYRFL 310
Query: 158 RPSKIDPARQLDWENFQQSSEIIDVLSTIHSEVPRGVVLGDYVIEYGD 205
I Q D +NFQ++ E + ++ H E+ + + V+++G+
Sbjct: 311 SNGYIPIPGQQDKDNFQETMEAMHIMGFSHEEILSMLKVVSSVLQFGN 358
>sp|Q61879|MYH10_MOUSE Myosin-10 OS=Mus musculus GN=Myh10 PE=1 SV=2
Length = 1976
Score = 31.6 bits (70), Expect = 8.4, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 13/108 (12%)
Query: 111 EVTGWVVADKVRDYLNEKKRCCEE--DQCTF-------AGTYLELRKHAQLE----HPHS 157
+VTG++V + YL EK R + D+ TF +G L+ LE +
Sbjct: 251 DVTGYIVGANIETYLLEKSRAVRQAKDERTFHIFYQLLSGAGEHLKSDLLLEGFNNYRFL 310
Query: 158 RPSKIDPARQLDWENFQQSSEIIDVLSTIHSEVPRGVVLGDYVIEYGD 205
I Q D +NFQ++ E + ++ H E+ + + V+++G+
Sbjct: 311 SNGYIPIPGQQDKDNFQETMEAMHIMGFSHEEILSMLKVVSSVLQFGN 358
>sp|P35580|MYH10_HUMAN Myosin-10 OS=Homo sapiens GN=MYH10 PE=1 SV=3
Length = 1976
Score = 31.6 bits (70), Expect = 8.4, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 13/108 (12%)
Query: 111 EVTGWVVADKVRDYLNEKKRCCEE--DQCTF-------AGTYLELRKHAQLE----HPHS 157
+VTG++V + YL EK R + D+ TF +G L+ LE +
Sbjct: 251 DVTGYIVGANIETYLLEKSRAVRQAKDERTFHIFYQLLSGAGEHLKSDLLLEGFNNYRFL 310
Query: 158 RPSKIDPARQLDWENFQQSSEIIDVLSTIHSEVPRGVVLGDYVIEYGD 205
I Q D +NFQ++ E + ++ H E+ + + V+++G+
Sbjct: 311 SNGYIPIPGQQDKDNFQETMEAMHIMGFSHEEILSMLKVVSSVLQFGN 358
>sp|Q9PL36|GATB_CHLMU Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
OS=Chlamydia muridarum (strain MoPn / Nigg) GN=gatB PE=3
SV=1
Length = 488
Score = 31.6 bits (70), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Query: 125 LNEKKRCCEEDQCTFAGTYLELRKHAQLE----HPHSRPSKIDPARQLDWENFQQSSEII 180
L K + TF LE KH Q+E HP+ P K+ PA W+ ++ + ++
Sbjct: 210 LRNKVEIKNMNSFTFMAQALEAEKHRQIEEYLSHPNEDPKKVVPAATYRWDPEKKKTVLM 269
>sp|B9LIV1|SYS_CHLSY Serine--tRNA ligase OS=Chloroflexus aurantiacus (strain ATCC 29364
/ DSM 637 / Y-400-fl) GN=serS PE=3 SV=1
Length = 423
Score = 31.2 bits (69), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 12/112 (10%)
Query: 107 LCRGEVTGWVVADKVRDYLNEKKRCCEEDQCTFAGTYLELRKHAQLEHPHSRPSKIDPAR 166
L R V G VV D+V + +++R E + A ++ ++ P R +KID R
Sbjct: 18 LARCGVDGAVV-DQVLAFDEQRRRLIYEVETRKAERNTVSKQIGAMKDPAERQAKIDAMR 76
Query: 167 QLDWE-----------NFQQSSEIIDVLSTIHSEVPRGVVLGDYVIEYGDDE 207
QL E QQ + ++++ + H +VP GV D V+ Y + E
Sbjct: 77 QLGDEIAALDRQLAEVEEQQRAVMLEIRNLPHPDVPDGVDDRDNVVIYQEGE 128
>sp|A9WE34|SYS_CHLAA Serine--tRNA ligase OS=Chloroflexus aurantiacus (strain ATCC 29366
/ DSM 635 / J-10-fl) GN=serS PE=3 SV=1
Length = 423
Score = 31.2 bits (69), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 12/112 (10%)
Query: 107 LCRGEVTGWVVADKVRDYLNEKKRCCEEDQCTFAGTYLELRKHAQLEHPHSRPSKIDPAR 166
L R V G VV D+V + +++R E + A ++ ++ P R +KID R
Sbjct: 18 LARCGVDGAVV-DQVLAFDEQRRRLIYEVETRKAERNTVSKQIGAMKDPAERQAKIDAMR 76
Query: 167 QLDWE-----------NFQQSSEIIDVLSTIHSEVPRGVVLGDYVIEYGDDE 207
QL E QQ + ++++ + H +VP GV D V+ Y + E
Sbjct: 77 QLGDEIAALDRQLAEVEEQQRAVMLEIRNLPHPDVPDGVDDRDNVVIYQEGE 128
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,822,782
Number of Sequences: 539616
Number of extensions: 5394068
Number of successful extensions: 13514
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 13503
Number of HSP's gapped (non-prelim): 23
length of query: 307
length of database: 191,569,459
effective HSP length: 117
effective length of query: 190
effective length of database: 128,434,387
effective search space: 24402533530
effective search space used: 24402533530
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)