BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021839
(307 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224101237|ref|XP_002312196.1| predicted protein [Populus trichocarpa]
gi|222852016|gb|EEE89563.1| predicted protein [Populus trichocarpa]
Length = 379
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 151/164 (92%), Positives = 160/164 (97%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSFSG EVMPLLPEESMDV++PEEDLEIS SRAGGKGGQNVNKVETAVRITHIPTGVTV
Sbjct: 216 QTSFSGVEVMPLLPEESMDVELPEEDLEISTSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQL+NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK
Sbjct: 276 RCTEERSQLSNKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDAN 307
LVKDVRTGHETSDI SVMDGEL+PFI++YLK+KYSM+LSAS+ N
Sbjct: 336 LVKDVRTGHETSDIASVMDGELDPFIRAYLKHKYSMTLSASEPN 379
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 117/144 (81%), Positives = 131/144 (90%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY+LRKDVE AS RVEE+RAS+GL LE+ELA+LE KAADSS WD+RA+AQETL AL
Sbjct: 1 MQDFYSLRKDVETASQRVEEMRASSGLHLLEQELADLESKAADSSLWDDRAKAQETLLAL 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
TDVKDKI LL +FKTK+++A TIVKLTEEMDSTDAG LEEA IIKELNKALD++ELTQL
Sbjct: 61 TDVKDKIKLLAEFKTKVEEAETIVKLTEEMDSTDAGFLEEATGIIKELNKALDKYELTQL 120
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
LSGPYDKEGAV+SITAGAGGTDAQ
Sbjct: 121 LSGPYDKEGAVLSITAGAGGTDAQ 144
>gi|356531868|ref|XP_003534498.1| PREDICTED: peptide chain release factor 2-like [Glycine max]
Length = 456
Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 151/164 (92%), Positives = 159/164 (96%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSFSG EVMPLLP+ESM+V+IPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV
Sbjct: 293 QTSFSGVEVMPLLPDESMNVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 352
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQLANKI+ALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK
Sbjct: 353 RCTEERSQLANKIRALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 412
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDAN 307
LVKDVRTGHET+DI SVMDGEL+PFIKSYLK+KY+MSLS S N
Sbjct: 413 LVKDVRTGHETTDITSVMDGELDPFIKSYLKHKYNMSLSTSGVN 456
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 108/144 (75%), Positives = 124/144 (86%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+QDFY+LRKDVE S RV EIR S+GLQ LE+EL LE +AADSSFWDNR +AQETL L
Sbjct: 78 LQDFYSLRKDVEIMSQRVGEIRESSGLQLLEQELGNLEEQAADSSFWDNRGKAQETLSTL 137
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
DVKDKI LL DFKT+++DA TIV LTEEMDS D GL EEA+++IKELNK++D++ELTQL
Sbjct: 138 ADVKDKIKLLNDFKTQVEDAETIVSLTEEMDSIDRGLFEEASNLIKELNKSIDRYELTQL 197
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
LSGPYDKEGAVISITAGAGGTDAQ
Sbjct: 198 LSGPYDKEGAVISITAGAGGTDAQ 221
>gi|225430898|ref|XP_002276037.1| PREDICTED: peptide chain release factor 2 [Vitis vinifera]
Length = 454
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 151/159 (94%), Positives = 157/159 (98%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSFSG EVMPLLPEESMDV+IPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV
Sbjct: 293 QTSFSGVEVMPLLPEESMDVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 352
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK
Sbjct: 353 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 412
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLS 302
LVKDVRTG+ETSDI SVMDGELEPFIK+YLK+K+SM+LS
Sbjct: 413 LVKDVRTGYETSDITSVMDGELEPFIKAYLKFKFSMTLS 451
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/144 (86%), Positives = 135/144 (93%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY LR+DVEA S+R EEIRASAGLQQLE+ELA LEMKAADSSFWD+RA+AQETL AL
Sbjct: 78 MQDFYTLRRDVEAISERAEEIRASAGLQQLEEELAALEMKAADSSFWDDRAKAQETLLAL 137
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
TDVKDKI LLTDFKT+++DA TIVKLTEEMDS D GLLEEAA+IIKELNKALD+FELTQL
Sbjct: 138 TDVKDKIKLLTDFKTQVEDAETIVKLTEEMDSIDTGLLEEAANIIKELNKALDRFELTQL 197
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
LSGPYDKEGAVISITAGAGGTDAQ
Sbjct: 198 LSGPYDKEGAVISITAGAGGTDAQ 221
>gi|297735238|emb|CBI17600.3| unnamed protein product [Vitis vinifera]
Length = 451
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 151/159 (94%), Positives = 157/159 (98%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSFSG EVMPLLPEESMDV+IPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV
Sbjct: 290 QTSFSGVEVMPLLPEESMDVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 349
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK
Sbjct: 350 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 409
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLS 302
LVKDVRTG+ETSDI SVMDGELEPFIK+YLK+K+SM+LS
Sbjct: 410 LVKDVRTGYETSDITSVMDGELEPFIKAYLKFKFSMTLS 448
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/144 (86%), Positives = 135/144 (93%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY LR+DVEA S+R EEIRASAGLQQLE+ELA LEMKAADSSFWD+RA+AQETL AL
Sbjct: 75 MQDFYTLRRDVEAISERAEEIRASAGLQQLEEELAALEMKAADSSFWDDRAKAQETLLAL 134
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
TDVKDKI LLTDFKT+++DA TIVKLTEEMDS D GLLEEAA+IIKELNKALD+FELTQL
Sbjct: 135 TDVKDKIKLLTDFKTQVEDAETIVKLTEEMDSIDTGLLEEAANIIKELNKALDRFELTQL 194
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
LSGPYDKEGAVISITAGAGGTDAQ
Sbjct: 195 LSGPYDKEGAVISITAGAGGTDAQ 218
>gi|46406291|emb|CAG25777.1| putative translation releasing factor 2 [Cucumis sativus]
Length = 453
Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 151/162 (93%), Positives = 159/162 (98%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSFSG EVMPLLP+ESM+V++PEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV
Sbjct: 292 QTSFSGVEVMPLLPDESMNVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 351
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK
Sbjct: 352 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 411
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASD 305
LVKDVRTG+ETSDIVSVMDGELEPFIK+YLKYKYS++LS D
Sbjct: 412 LVKDVRTGYETSDIVSVMDGELEPFIKAYLKYKYSIALSTGD 453
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/143 (76%), Positives = 129/143 (90%)
Query: 2 QDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALT 61
QDFY LRK+VE S+RVEEIR SAGL QL++ELA+LE KAAD+SFWD+R++AQ+ L A+T
Sbjct: 78 QDFYTLRKEVETTSERVEEIRNSAGLLQLDQELADLESKAADNSFWDDRSKAQKVLMAMT 137
Query: 62 DVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLL 121
DVKDKI +LTDFKT++++A TIVKLTEEMDS D GLLEEA IIK+LNKALDQFEL++LL
Sbjct: 138 DVKDKIKMLTDFKTQVEEAETIVKLTEEMDSVDVGLLEEATKIIKDLNKALDQFELSELL 197
Query: 122 SGPYDKEGAVISITAGAGGTDAQ 144
SGPYDKEGAVISI+AGAGGTDAQ
Sbjct: 198 SGPYDKEGAVISISAGAGGTDAQ 220
>gi|449485390|ref|XP_004157153.1| PREDICTED: peptide chain release factor 2-like, partial [Cucumis
sativus]
Length = 237
Score = 320 bits (821), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 151/162 (93%), Positives = 159/162 (98%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSFSG EVMPLLP+ESM+V++PEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV
Sbjct: 76 QTSFSGVEVMPLLPDESMNVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 135
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK
Sbjct: 136 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 195
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASD 305
LVKDVRTG+ETSDIVSVMDGELEPFIK+YLKYKYS++LS D
Sbjct: 196 LVKDVRTGYETSDIVSVMDGELEPFIKAYLKYKYSIALSTGD 237
>gi|449442779|ref|XP_004139158.1| PREDICTED: peptide chain release factor 2-like [Cucumis sativus]
Length = 450
Score = 320 bits (820), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 151/162 (93%), Positives = 159/162 (98%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSFSG EVMPLLP+ESM+V++PEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV
Sbjct: 289 QTSFSGVEVMPLLPDESMNVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 348
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK
Sbjct: 349 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 408
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASD 305
LVKDVRTG+ETSDIVSVMDGELEPFIK+YLKYKYS++LS D
Sbjct: 409 LVKDVRTGYETSDIVSVMDGELEPFIKAYLKYKYSIALSTGD 450
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/144 (66%), Positives = 119/144 (82%), Gaps = 3/144 (2%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY LRK+VE S+RVEEIR SAGL QL++ELA+LE KAAD+SFWD+R++AQ+ L +
Sbjct: 77 MQDFYTLRKEVETTSERVEEIRNSAGLLQLDQELADLESKAADNSFWDDRSKAQKVLMGV 136
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+ + + + ++++A TIVKLTEEMDS D GLLEEA IIK+LNKALDQFEL++L
Sbjct: 137 V-ILECVGCV--MMIQVEEAETIVKLTEEMDSVDVGLLEEATKIIKDLNKALDQFELSEL 193
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
LSGPYDKEGAVISI+AGAGGTDAQ
Sbjct: 194 LSGPYDKEGAVISISAGAGGTDAQ 217
>gi|255547508|ref|XP_002514811.1| peptide chain release factor, putative [Ricinus communis]
gi|223545862|gb|EEF47365.1| peptide chain release factor, putative [Ricinus communis]
Length = 458
Score = 317 bits (811), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 149/161 (92%), Positives = 157/161 (97%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSFSG EVMPLLPEESMDV++PEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV
Sbjct: 298 QTSFSGIEVMPLLPEESMDVELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 357
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQLANKIKALSRLKAKLLVIA EQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK
Sbjct: 358 RCTEERSQLANKIKALSRLKAKLLVIAVEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 417
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSAS 304
LVKDVRTG+ETSD+ SVMDGELE FIK+YLKYKYSM+LS++
Sbjct: 418 LVKDVRTGYETSDVTSVMDGELEAFIKAYLKYKYSMTLSST 458
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/144 (81%), Positives = 133/144 (92%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY+LR+DVEAAS+RVEEIR SAGLQQLE+E+ LE KAA++SFWD+RA AQETL AL
Sbjct: 83 MQDFYSLRRDVEAASERVEEIRTSAGLQQLEQEVTNLESKAANTSFWDDRATAQETLLAL 142
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
TDVKDKI LLT+FKTK++DA TIVKLTEEMDS D GLLEEA+SIIKELNK+L++FELTQL
Sbjct: 143 TDVKDKIKLLTEFKTKVEDAETIVKLTEEMDSIDTGLLEEASSIIKELNKSLERFELTQL 202
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
LSGPYDKE AVISITAGAGGTDAQ
Sbjct: 203 LSGPYDKESAVISITAGAGGTDAQ 226
>gi|357507841|ref|XP_003624209.1| Peptide chain release factor [Medicago truncatula]
gi|355499224|gb|AES80427.1| Peptide chain release factor [Medicago truncatula]
Length = 475
Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 146/164 (89%), Positives = 156/164 (95%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSFSG EVMPLLPEES++V+IPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVT+
Sbjct: 312 QTSFSGVEVMPLLPEESLNVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTL 371
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQLANKIKALSRLKAKLLVIAEEQRA+E KQIRGD VKAEWGQQIRNYVFHPYK
Sbjct: 372 RCTEERSQLANKIKALSRLKAKLLVIAEEQRATEFKQIRGDVVKAEWGQQIRNYVFHPYK 431
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDAN 307
LVKDVRTGHET DI SV+DGEL+PFIKSYLK+KYSM++S S N
Sbjct: 432 LVKDVRTGHETPDITSVIDGELDPFIKSYLKHKYSMTMSTSGVN 475
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/144 (73%), Positives = 128/144 (88%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+QDFY+LRKDVE AS RV+EIR S+GLQ LE+ELA+LE +A+ SSFWD+RA+AQ+TL L
Sbjct: 97 LQDFYSLRKDVEIASQRVKEIRESSGLQLLEQELAKLEEEASCSSFWDDRAKAQQTLSTL 156
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
DVK+KI LL D+KT+++DA TIV LTEEM+S D GL EEA+S+IKELNK++D+FELTQL
Sbjct: 157 ADVKEKIKLLNDYKTQVEDAETIVMLTEEMESVDKGLYEEASSLIKELNKSIDRFELTQL 216
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
LSGPYDKEGAVISITAGAGGTDAQ
Sbjct: 217 LSGPYDKEGAVISITAGAGGTDAQ 240
>gi|255637443|gb|ACU19049.1| unknown [Glycine max]
Length = 155
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/155 (92%), Positives = 151/155 (97%)
Query: 153 MPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQL 212
MPLLP+ESM+V+IPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQL
Sbjct: 1 MPLLPDESMNVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQL 60
Query: 213 ANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGH 272
ANKI+ALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGH
Sbjct: 61 ANKIRALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGH 120
Query: 273 ETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDAN 307
ET+DI SVMDGEL+PFIKSYLK+KY+MSLS S N
Sbjct: 121 ETTDITSVMDGELDPFIKSYLKHKYNMSLSTSGVN 155
>gi|297805172|ref|XP_002870470.1| HCF109 [Arabidopsis lyrata subsp. lyrata]
gi|297316306|gb|EFH46729.1| HCF109 [Arabidopsis lyrata subsp. lyrata]
Length = 453
Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 136/164 (82%), Positives = 156/164 (95%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSFSG EVMPLLPEE++ ++IPEEDL+ISF+RAGGKGGQNVNKVETAVRITHIPTGV V
Sbjct: 290 QTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNVNKVETAVRITHIPTGVAV 349
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQLANK +AL RLKAKLLVIAEEQRA+EIK+IRGDAVKAEWGQQIRNYVFHPYK
Sbjct: 350 RCTEERSQLANKTRALIRLKAKLLVIAEEQRATEIKEIRGDAVKAEWGQQIRNYVFHPYK 409
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDAN 307
LVKDVRTGHETSDI SVMDG+L+PFIK+YLK+KY+++++++ N
Sbjct: 410 LVKDVRTGHETSDITSVMDGDLDPFIKAYLKHKYTLAMASAVTN 453
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/144 (77%), Positives = 127/144 (88%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY LRKDVE AS RVEEIRASAGL+QLE+E+A LE KA D+SFWD+R +AQETL AL
Sbjct: 75 MQDFYTLRKDVEIASARVEEIRASAGLEQLEQEIANLESKATDTSFWDDRTKAQETLSAL 134
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
D+KD++ LL++FKT ++DA TIVKLTEEMDSTD LLEEA IIKELNK+LD+FELTQL
Sbjct: 135 NDLKDRMRLLSEFKTMVEDAETIVKLTEEMDSTDVSLLEEAMGIIKELNKSLDRFELTQL 194
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
LSGPYDKEGAV+ ITAGAGGTDAQ
Sbjct: 195 LSGPYDKEGAVVYITAGAGGTDAQ 218
>gi|30692913|ref|NP_851097.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
gi|13568392|emb|CAC36322.1| translation releasing factor2 [Arabidopsis thaliana]
gi|332006670|gb|AED94053.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
Length = 455
Score = 299 bits (766), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 135/164 (82%), Positives = 156/164 (95%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSFSG EVMPLLPEE++ ++IPEEDL+ISF+RAGGKGGQNVNKVETAVRITHIPTGV V
Sbjct: 292 QTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNVNKVETAVRITHIPTGVAV 351
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQLANK +AL RLKAKL+VIAEEQRA+EIK+IRGDAVKAEWGQQIRNYVFHPYK
Sbjct: 352 RCTEERSQLANKTRALIRLKAKLMVIAEEQRATEIKEIRGDAVKAEWGQQIRNYVFHPYK 411
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDAN 307
LVKDVRTGHETSDI SVMDG+L+PFIK+YLK+KY+++++++ N
Sbjct: 412 LVKDVRTGHETSDITSVMDGDLDPFIKAYLKHKYTLAMASAVTN 455
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/144 (75%), Positives = 125/144 (86%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY LRKDVE AS RVEEIRASA LQQLE+E+ LE KA D+SFWD+R +AQETL +L
Sbjct: 77 MQDFYTLRKDVEIASARVEEIRASANLQQLEQEITNLESKATDTSFWDDRTKAQETLSSL 136
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
D+KD++ LL++FKT ++DA TIVKLTEEMDSTD LLEEA IIKELNK+LD+FELTQL
Sbjct: 137 NDLKDRMRLLSEFKTMVEDAETIVKLTEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQL 196
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
LSGPYDKEGAV+ ITAGAGGTDAQ
Sbjct: 197 LSGPYDKEGAVVYITAGAGGTDAQ 220
>gi|30692908|ref|NP_851096.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
gi|8777302|dbj|BAA96892.1| translation releasing factor RF-2 [Arabidopsis thaliana]
gi|15810391|gb|AAL07083.1| putative translation releasing factor RF-2 [Arabidopsis thaliana]
gi|21436317|gb|AAM51328.1| putative translation releasing factor RF-2 [Arabidopsis thaliana]
gi|21536944|gb|AAM61285.1| translation releasing factor RF-2 [Arabidopsis thaliana]
gi|332006668|gb|AED94051.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
Length = 456
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 135/164 (82%), Positives = 156/164 (95%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSFSG EVMPLLPEE++ ++IPEEDL+ISF+RAGGKGGQNVNKVETAVRITHIPTGV V
Sbjct: 293 QTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNVNKVETAVRITHIPTGVAV 352
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQLANK +AL RLKAKL+VIAEEQRA+EIK+IRGDAVKAEWGQQIRNYVFHPYK
Sbjct: 353 RCTEERSQLANKTRALIRLKAKLMVIAEEQRATEIKEIRGDAVKAEWGQQIRNYVFHPYK 412
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDAN 307
LVKDVRTGHETSDI SVMDG+L+PFIK+YLK+KY+++++++ N
Sbjct: 413 LVKDVRTGHETSDITSVMDGDLDPFIKAYLKHKYTLAMASAVTN 456
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/144 (75%), Positives = 125/144 (86%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY LRKDVE AS RVEEIRASA LQQLE+E+ LE KA D+SFWD+R +AQETL +L
Sbjct: 78 MQDFYTLRKDVEIASARVEEIRASANLQQLEQEITNLESKATDTSFWDDRTKAQETLSSL 137
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
D+KD++ LL++FKT ++DA TIVKLTEEMDSTD LLEEA IIKELNK+LD+FELTQL
Sbjct: 138 NDLKDRMRLLSEFKTMVEDAETIVKLTEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQL 197
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
LSGPYDKEGAV+ ITAGAGGTDAQ
Sbjct: 198 LSGPYDKEGAVVYITAGAGGTDAQ 221
>gi|222637229|gb|EEE67361.1| hypothetical protein OsJ_24645 [Oryza sativa Japonica Group]
Length = 498
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 138/155 (89%), Positives = 146/155 (94%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMPLLPEESMDV+IPEEDLEISF+RAGGKGGQNVNKVETAVR+ HIPTG+ V
Sbjct: 335 QTSFAGVEVMPLLPEESMDVEIPEEDLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAV 394
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK
Sbjct: 395 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 454
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKDVRT ETSDI VMDGEL+ FI++YLKYK S
Sbjct: 455 LVKDVRTACETSDITGVMDGELDTFIRAYLKYKLS 489
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/144 (71%), Positives = 121/144 (84%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY LRKDVE A RV E+R SAGL QLE+E+A LE K+ADSS WD+ ++AQE L AL
Sbjct: 120 MQDFYALRKDVELAVARVSEVRQSAGLDQLEEEIASLEKKSADSSLWDDPSKAQEILVAL 179
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
T+VKD++ LL D K ++++A TIVKLTEE+DS D GLLEEA+ IIK LNKALD FE+TQL
Sbjct: 180 TEVKDRVKLLNDLKLQVEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQL 239
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
LSGPYDKEGAVI+ITAGAGGTDAQ
Sbjct: 240 LSGPYDKEGAVINITAGAGGTDAQ 263
>gi|115472651|ref|NP_001059924.1| Os07g0546600 [Oryza sativa Japonica Group]
gi|33146529|dbj|BAC79675.1| putative translation releasing factor2 [Oryza sativa Japonica
Group]
gi|113611460|dbj|BAF21838.1| Os07g0546600 [Oryza sativa Japonica Group]
Length = 460
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 138/155 (89%), Positives = 146/155 (94%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMPLLPEESMDV+IPEEDLEISF+RAGGKGGQNVNKVETAVR+ HIPTG+ V
Sbjct: 297 QTSFAGVEVMPLLPEESMDVEIPEEDLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAV 356
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK
Sbjct: 357 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 416
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKDVRT ETSDI VMDGEL+ FI++YLKYK S
Sbjct: 417 LVKDVRTACETSDITGVMDGELDTFIRAYLKYKLS 451
Score = 207 bits (526), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 103/144 (71%), Positives = 121/144 (84%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY LRKDVE A RV E+R SAGL QLE+E+A LE K+ADSS WD+ ++AQE L AL
Sbjct: 82 MQDFYALRKDVELAVARVSEVRQSAGLDQLEEEIASLEKKSADSSLWDDPSKAQEILVAL 141
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
T+VKD++ LL D K ++++A TIVKLTEE+DS D GLLEEA+ IIK LNKALD FE+TQL
Sbjct: 142 TEVKDRVKLLNDLKLQVEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQL 201
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
LSGPYDKEGAVI+ITAGAGGTDAQ
Sbjct: 202 LSGPYDKEGAVINITAGAGGTDAQ 225
>gi|125558711|gb|EAZ04247.1| hypothetical protein OsI_26391 [Oryza sativa Indica Group]
Length = 457
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 138/155 (89%), Positives = 146/155 (94%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMPLLPEESMDV+IPEEDLEISF+RAGGKGGQNVNKVETAVR+ HIPTG+ V
Sbjct: 294 QTSFAGVEVMPLLPEESMDVEIPEEDLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAV 353
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK
Sbjct: 354 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 413
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKDVRT ETSDI VMDGEL+ FI++YLKYK S
Sbjct: 414 LVKDVRTACETSDITGVMDGELDTFIRAYLKYKLS 448
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/142 (71%), Positives = 120/142 (84%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DFY LRKDVE A RV E+R SAGL QLE+E+A LE K+ADSS WD+ ++AQE L ALT+
Sbjct: 81 DFYALRKDVELALARVGEVRQSAGLDQLEEEIASLEKKSADSSLWDDPSKAQEILVALTE 140
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
VKD++ LL D K+++++A TIVKLTEE+DS D GLLEEA+ IIK LNKALD FE+TQLLS
Sbjct: 141 VKDRVKLLNDLKSQVEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQLLS 200
Query: 123 GPYDKEGAVISITAGAGGTDAQ 144
GPYDKEGAVI+ITAGAGGTDAQ
Sbjct: 201 GPYDKEGAVINITAGAGGTDAQ 222
>gi|357116694|ref|XP_003560113.1| PREDICTED: peptide chain release factor 2-like [Brachypodium
distachyon]
Length = 459
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 134/157 (85%), Positives = 147/157 (93%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMPLLPEES+DV+IPEEDLEISF+RAGGKGGQNVNKVETAVR+ HIPTG+ V
Sbjct: 296 QTSFAGVEVMPLLPEESLDVEIPEEDLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAV 355
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RC+EERSQLANKIKAL RLKAKLLVIAEEQRASEIKQIRGD VKAEWGQQIRNYVFHPYK
Sbjct: 356 RCSEERSQLANKIKALRRLKAKLLVIAEEQRASEIKQIRGDVVKAEWGQQIRNYVFHPYK 415
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 300
LVKDVRT ETSDI VMDGEL+PFI++YL+YK S++
Sbjct: 416 LVKDVRTACETSDISGVMDGELDPFIRAYLQYKLSVA 452
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/144 (68%), Positives = 122/144 (84%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY LRKDVE + DRV E+R SAGL+ LE+E+A LE K+ DS+ WD+ ++AQE L AL
Sbjct: 81 MQDFYALRKDVELSVDRVNEVRRSAGLELLEEEIASLEKKSGDSTLWDDPSKAQELLVAL 140
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
T+VK+K+ +L DFK+++++A TIVKLTEE+DS D GLLEEA+ IIK LNKALD FE+T L
Sbjct: 141 TEVKEKVKILNDFKSQVEEADTIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTLL 200
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
LSGPYDKEGAVI+I+AGAGGTDAQ
Sbjct: 201 LSGPYDKEGAVITISAGAGGTDAQ 224
>gi|326511439|dbj|BAJ87733.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 517
Score = 290 bits (741), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 135/155 (87%), Positives = 145/155 (93%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMPLLPEES+DV+IPEEDL+ISF+RAGGKGGQNVNKVETAVR+ HIPTG+ V
Sbjct: 354 QTSFAGVEVMPLLPEESLDVEIPEEDLDISFTRAGGKGGQNVNKVETAVRMVHIPTGIAV 413
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RC EERSQLANKIKAL RLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK
Sbjct: 414 RCAEERSQLANKIKALRRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 473
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKDVRT ETSDI VMDGEL+PFIK+YL+YK S
Sbjct: 474 LVKDVRTACETSDISGVMDGELDPFIKAYLQYKLS 508
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 122/144 (84%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY LRKDVE A +RV E+R AGL+QL +E+A LE K+ DS+ WD+ ++AQE L AL
Sbjct: 139 MQDFYALRKDVELAVERVNEVRQDAGLEQLLEEIASLENKSGDSTLWDDPSKAQELLVAL 198
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
T++K+K+ LL DFK+++++A TIV+LTEE+DS D GLLEEA+ IIK LNKALD FE+T+L
Sbjct: 199 TELKEKVKLLNDFKSQVEEADTIVQLTEELDSIDTGLLEEASKIIKALNKALDNFEMTRL 258
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
LSGPYDK+GAVI+I+AGAGGTDAQ
Sbjct: 259 LSGPYDKDGAVITISAGAGGTDAQ 282
>gi|326493842|dbj|BAJ85383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 236
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 135/157 (85%), Positives = 146/157 (92%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMPLLPEES+DV+IPEEDL+ISF+RAGGKGGQNVNKVETAVR+ HIPTG+ V
Sbjct: 73 QTSFAGVEVMPLLPEESLDVEIPEEDLDISFTRAGGKGGQNVNKVETAVRMVHIPTGIAV 132
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RC EERSQLANKIKAL RLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK
Sbjct: 133 RCAEERSQLANKIKALRRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 192
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 300
LVKDVRT ETSDI VMDGEL+PFIK+YL+YK S +
Sbjct: 193 LVKDVRTACETSDISGVMDGELDPFIKAYLQYKLSAA 229
>gi|226531101|ref|NP_001152654.1| peptide chain release factor 2 [Zea mays]
gi|195658609|gb|ACG48772.1| peptide chain release factor 2 [Zea mays]
gi|223950205|gb|ACN29186.1| unknown [Zea mays]
gi|414887031|tpg|DAA63045.1| TPA: peptide chain release factor 2 [Zea mays]
Length = 449
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 135/160 (84%), Positives = 147/160 (91%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMPLLPEESM V IPEEDLEISF+RAGGKGGQNVNKVETAVR+ HIPTG+ V
Sbjct: 290 QTSFAGVEVMPLLPEESMAVDIPEEDLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAV 349
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RC+EERSQLANKIKALSRLKAKLLVIA EQRASEIKQIRGD VKAEWGQQIRNYVFHPYK
Sbjct: 350 RCSEERSQLANKIKALSRLKAKLLVIALEQRASEIKQIRGDIVKAEWGQQIRNYVFHPYK 409
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 303
LVKDVRTG ETSDI VMDGEL+PFI++YLKYK + + ++
Sbjct: 410 LVKDVRTGCETSDITGVMDGELDPFIRAYLKYKLTAAATS 449
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 123/144 (85%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+QDFY LRKDVE A +RV E+R SAGLQQLE+++A LE K++DSS WD+ ++AQ L +L
Sbjct: 75 LQDFYILRKDVELALERVNEVRQSAGLQQLEEDIASLENKSSDSSLWDDPSKAQGILVSL 134
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
T+VKDK+ LL DFK ++++A TIVKLTEE+DS D GLLEEA+ IIK LNKALD FE+TQL
Sbjct: 135 TEVKDKVKLLNDFKLQIEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQL 194
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
LSGPYDKEGAVI+I+AGAGGTDAQ
Sbjct: 195 LSGPYDKEGAVINISAGAGGTDAQ 218
>gi|413938323|gb|AFW72874.1| hypothetical protein ZEAMMB73_942412 [Zea mays]
Length = 227
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 135/160 (84%), Positives = 147/160 (91%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMPLLPEESM V IPEEDLEISF+RAGGKGGQNVNKVETAVR+ HIPTG+ V
Sbjct: 68 QTSFAGVEVMPLLPEESMAVDIPEEDLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAV 127
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RC+EERSQLANKIKALSRLKAKLLVIA EQRASEIKQIRGD VKAEWGQQIRNYVFHPYK
Sbjct: 128 RCSEERSQLANKIKALSRLKAKLLVIALEQRASEIKQIRGDIVKAEWGQQIRNYVFHPYK 187
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 303
LVKDVRTG ETSDI VMDGEL+PFI++YLKYK + + ++
Sbjct: 188 LVKDVRTGCETSDITGVMDGELDPFIRAYLKYKLTAAATS 227
>gi|302820696|ref|XP_002992014.1| hypothetical protein SELMODRAFT_134701 [Selaginella moellendorffii]
gi|300140136|gb|EFJ06863.1| hypothetical protein SELMODRAFT_134701 [Selaginella moellendorffii]
Length = 382
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 163/370 (44%), Positives = 215/370 (58%), Gaps = 72/370 (19%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWD-------------- 48
+FY+LRKDVE + RV ++ SA L+Q E LA+LE +A+D +FW+
Sbjct: 8 EFYSLRKDVENVAARVRQLLDSADLEQQEAVLADLENQASDPAFWEERSKAQKILSELNE 67
Query: 49 --NRAEAQETLQA-LTDVKDKINLLTDFKT-----KMDDAVTIVKLTEEMD--------- 91
+R +T +A + D + + LL + ++ K++ A T+ +T MD
Sbjct: 68 IKDRVNLYKTFRAKVDDAQCIVELLEEMESPDAALKLEAAETVSWITAAMDRFELNKLLS 127
Query: 92 -----------------STDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEG---AV 131
TDA E + + F+ T + S P ++ G A
Sbjct: 128 GTYDKEGARITITAGAGGTDAQDWAEMLLRMYQRWATRSGFKSTVVESSPGEEAGIKSAT 187
Query: 132 ISI--------TAGAGGTDA-------------QTSFSGAEVMPLLPEESMDVQIPEEDL 170
+ I +G GT QTSF+G EVMPLL E ++V+IPE DL
Sbjct: 188 LEIDGRYAYGYISGEKGTHRLVRQSPFNSKGLRQTSFAGVEVMPLLEESEIEVEIPEGDL 247
Query: 171 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 230
EI+ R+GGKGGQNVNKVETAVR+THIPTG+ +RC+EERSQL NKIKA++ LK+KLLVI
Sbjct: 248 EITTCRSGGKGGQNVNKVETAVRVTHIPTGIALRCSEERSQLQNKIKAIALLKSKLLVIL 307
Query: 231 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 290
E+QRA+EIK+IRGD VKAEWGQQIRNYVFHPYKLVKD+RT ETSDI +MDG LEP +
Sbjct: 308 EDQRAAEIKEIRGDVVKAEWGQQIRNYVFHPYKLVKDLRTNVETSDISGIMDGNLEPLLT 367
Query: 291 SYLKYKYSMS 300
+YL K S S
Sbjct: 368 AYLMSKQSSS 377
>gi|302762182|ref|XP_002964513.1| hypothetical protein SELMODRAFT_64370 [Selaginella moellendorffii]
gi|300168242|gb|EFJ34846.1| hypothetical protein SELMODRAFT_64370 [Selaginella moellendorffii]
Length = 366
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 162/366 (44%), Positives = 213/366 (58%), Gaps = 72/366 (19%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWD-------------- 48
+FY+LRKDVE + RV ++ SA L+Q E LA+LE +A+D +FW+
Sbjct: 1 EFYSLRKDVENVAARVRQLLDSADLEQQEAVLADLENQASDPAFWEERSKAQKILSELNE 60
Query: 49 --NRAEAQETLQA-LTDVKDKINLLTDFKT-----KMDDAVTIVKLTEEMD--------- 91
+R +T +A + D + + LL + ++ K++ A T+ +T MD
Sbjct: 61 IKDRVNLYKTFRAKVDDAQCIVELLEEMESPDAALKLEAAETVSWITAAMDRFELNKLLS 120
Query: 92 -----------------STDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEG---AV 131
TDA E + + F+ T + S P ++ G A
Sbjct: 121 GTYDKEGARITITAGAGGTDAQDWAEMLLRMYQRWATRSGFKSTVVESSPGEEAGIKSAT 180
Query: 132 ISI--------TAGAGGTDA-------------QTSFSGAEVMPLLPEESMDVQIPEEDL 170
+ I +G GT QTSF+G EVMPLL E ++V+IPE DL
Sbjct: 181 LEIDGRYAYGYISGEKGTHRLVRQSPFNSKGLRQTSFAGVEVMPLLEESEIEVEIPEGDL 240
Query: 171 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 230
EI+ R+GGKGGQNVNKVETAVR+THIPTG+ +RC+EERSQL NKIKA++ LK+KLLVI
Sbjct: 241 EITTCRSGGKGGQNVNKVETAVRVTHIPTGIALRCSEERSQLQNKIKAIALLKSKLLVIL 300
Query: 231 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 290
EEQRA+EIK+IRGD VKAEWGQQIRNYVFHPYKLVKD+RT ETSDI +MDG LEP +
Sbjct: 301 EEQRAAEIKEIRGDVVKAEWGQQIRNYVFHPYKLVKDLRTNVETSDISGIMDGNLEPLLT 360
Query: 291 SYLKYK 296
+YL K
Sbjct: 361 AYLMSK 366
>gi|168025410|ref|XP_001765227.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683546|gb|EDQ69955.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 406
Score = 254 bits (648), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 119/161 (73%), Positives = 140/161 (86%), Gaps = 1/161 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP+ EES+DV+IPE +LE++ +RAGGKGGQNVNKVETAVRI HIPTG+ V
Sbjct: 244 QTSFAGVEVMPIFEEESLDVEIPETELEVTTTRAGGKGGQNVNKVETAVRIVHIPTGIAV 303
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQLANKIK L LKAKLLVIA EQ+AS++K+IRGD VKAEWGQQIRNYVFHPYK
Sbjct: 304 RCTEERSQLANKIKGLRLLKAKLLVIALEQKASDLKEIRGDVVKAEWGQQIRNYVFHPYK 363
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSAS 304
LVKDVRT ETSD+ VMDGEL FI ++L++K ++S S+S
Sbjct: 364 LVKDVRTATETSDVAGVMDGELGSFITAFLRWK-TLSESSS 403
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 100/142 (70%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
+FY +RK VE RV E+ AS+ + + + LA+LE++A+ + WD+ AQ TL L +
Sbjct: 31 EFYAVRKKVEELVRRVGEVLASSDIAEKKARLADLELQASQDTLWDDPDAAQRTLSDLAE 90
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
VK+ ++LL F+ K+++A I++L E + D GL++EA+ I+ L+ ALD+FEL +LLS
Sbjct: 91 VKENLDLLQQFENKVEEAQLIIELMGEKEGPDGGLVQEASEIVSWLSNALDKFELAKLLS 150
Query: 123 GPYDKEGAVISITAGAGGTDAQ 144
GPYD+ GA ++I+AGAGGTDAQ
Sbjct: 151 GPYDRRGARVTISAGAGGTDAQ 172
>gi|242050470|ref|XP_002462979.1| hypothetical protein SORBIDRAFT_02g035755 [Sorghum bicolor]
gi|241926356|gb|EER99500.1| hypothetical protein SORBIDRAFT_02g035755 [Sorghum bicolor]
Length = 363
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 118/132 (89%), Positives = 125/132 (94%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMPLLPEESM V IPEEDL+ISF+RAGGKGGQNVNKVETAVR+ HIPTG+ V
Sbjct: 232 QTSFAGVEVMPLLPEESMAVDIPEEDLDISFTRAGGKGGQNVNKVETAVRMVHIPTGIAV 291
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RC+EERSQLANKIKAL+RLKAKLLVIAEEQRASEIKQIRGD VKAEWGQQIRNYVFHPYK
Sbjct: 292 RCSEERSQLANKIKALNRLKAKLLVIAEEQRASEIKQIRGDMVKAEWGQQIRNYVFHPYK 351
Query: 264 LVKDVRTGHETS 275
LVKDVRTG ETS
Sbjct: 352 LVKDVRTGCETS 363
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 124/144 (86%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+QDFY LRKDVE A +RV E+R SAGL+QLE+++A LE K+ADSS WD+ ++AQE L +L
Sbjct: 17 LQDFYTLRKDVELALERVNEVRQSAGLEQLEEDIASLEKKSADSSLWDDPSKAQEILVSL 76
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
T+VKD++ LL DFK ++++A TIVKLTEE+DS D GLLEEA+ IIK LNKALD FE+TQL
Sbjct: 77 TEVKDRVKLLNDFKLQVEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQL 136
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
LSGPYDKEGAVI+I+AGAGGTDAQ
Sbjct: 137 LSGPYDKEGAVINISAGAGGTDAQ 160
>gi|413948643|gb|AFW81292.1| hypothetical protein ZEAMMB73_079544 [Zea mays]
Length = 377
Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 116/128 (90%), Positives = 121/128 (94%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMPLLPEESM V IPEEDLEISF+RAGGKGGQNVNKVETAVR+ HIPTG+ V
Sbjct: 189 QTSFAGVEVMPLLPEESMAVDIPEEDLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAV 248
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RC+EERSQLANKIKALSRLKAKLLVIA EQRASEIKQIRGD VKAEWGQQIRNYVFHPYK
Sbjct: 249 RCSEERSQLANKIKALSRLKAKLLVIALEQRASEIKQIRGDIVKAEWGQQIRNYVFHPYK 308
Query: 264 LVKDVRTG 271
LVKDVRTG
Sbjct: 309 LVKDVRTG 316
>gi|414872707|tpg|DAA51264.1| TPA: hypothetical protein ZEAMMB73_478053 [Zea mays]
Length = 289
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/128 (90%), Positives = 121/128 (94%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMPLLPEESM V IPEEDLEISF+RAGGKGGQNVNKVETAVR+ HIPTG+ V
Sbjct: 101 QTSFAGVEVMPLLPEESMAVDIPEEDLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAV 160
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RC+EERSQLANKIKALSRLKAKLLVIA EQRASEIKQIRGD VKAEWGQQIRNYVFHPYK
Sbjct: 161 RCSEERSQLANKIKALSRLKAKLLVIALEQRASEIKQIRGDIVKAEWGQQIRNYVFHPYK 220
Query: 264 LVKDVRTG 271
LVKDVRTG
Sbjct: 221 LVKDVRTG 228
>gi|414585985|tpg|DAA36556.1| TPA: hypothetical protein ZEAMMB73_481691 [Zea mays]
Length = 983
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/128 (90%), Positives = 121/128 (94%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMPLLPEESM V IPEEDLEISF+RAGGKGGQNVNKVETAVR+ HIPTG+ V
Sbjct: 795 QTSFAGVEVMPLLPEESMAVDIPEEDLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAV 854
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RC+EERSQLANKIKALSRLKAKLLVIA EQRASEIKQIRGD VKAEWGQQIRNYVFHPYK
Sbjct: 855 RCSEERSQLANKIKALSRLKAKLLVIALEQRASEIKQIRGDIVKAEWGQQIRNYVFHPYK 914
Query: 264 LVKDVRTG 271
LVKDVRTG
Sbjct: 915 LVKDVRTG 922
>gi|170076819|ref|YP_001733457.1| peptide chain release factor 2 [Synechococcus sp. PCC 7002]
gi|169884488|gb|ACA98201.1| peptide chain release factor 2 [Synechococcus sp. PCC 7002]
Length = 359
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 136/280 (48%), Positives = 181/280 (64%), Gaps = 22/280 (7%)
Query: 23 ASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLLTDFKTKMDD 79
A L L+KEL E++ S +DN A T+ A TD +D +L T+ +
Sbjct: 87 AMENLDDLQKELNRWELQQMLSGEYDNLG-AVLTINAGAGGTDAQDWAEMLLRMYTRWSE 145
Query: 80 AVTI-VKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKE----GAVISI 134
V+L E + +AGL ++A++ E+T + Y K ++ I
Sbjct: 146 KQGYKVRLAEISEGDEAGL--KSATL-----------EVTGRYAFGYLKHEKGTHRLVRI 192
Query: 135 TAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 194
+ QTSF+G EVMP+L + ++ V IPE+DLEI+ SRAGGKGGQNVNKVETAVRI
Sbjct: 193 SPFNANGKRQTSFAGVEVMPILGDNAVKVDIPEKDLEITTSRAGGKGGQNVNKVETAVRI 252
Query: 195 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 254
H+PTGV VRCT+ERSQL NK KAL+ LKAKLL+IA+EQRA EI +IRGD V+A WG QI
Sbjct: 253 VHLPTGVAVRCTQERSQLQNKEKALAILKAKLLIIAQEQRAQEIAEIRGDMVEAAWGNQI 312
Query: 255 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
RNYVFHPY++VKD+RT HET+D+ VMDG+L+ FI++ L+
Sbjct: 313 RNYVFHPYQMVKDLRTNHETTDVDGVMDGDLDAFIEASLR 352
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 76/118 (64%), Gaps = 2/118 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L+ L+ ++ +LE +AA FW+++ AQ+ LQ LT++K + ++ + +DA I +L
Sbjct: 15 LKTLDAKIFDLEQQAAQPEFWEDQQGAQDILQELTELKGTVAQYQQWQGQFEDAAAIAEL 74
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E + D LL EA + +L K L+++EL Q+LSG YD GAV++I AGAGGTDAQ
Sbjct: 75 LTEAE--DPALLTEAMENLDDLQKELNRWELQQMLSGEYDNLGAVLTINAGAGGTDAQ 130
>gi|427723106|ref|YP_007070383.1| peptide chain release factor 2 (bRF-2) [Leptolyngbya sp. PCC 7376]
gi|427354826|gb|AFY37549.1| bacterial peptide chain release factor 2 (bRF-2) [Leptolyngbya sp.
PCC 7376]
Length = 373
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 133/276 (48%), Positives = 183/276 (66%), Gaps = 14/276 (5%)
Query: 23 ASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLLTDFKTKMDD 79
A L+ L+KEL E++ S +DN A T+ A TD +D +L T+ +
Sbjct: 99 AIQNLETLQKELDRWELQQMLSGEYDNNG-AVLTINAGAGGTDAQDWAEMLLRMYTRWSE 157
Query: 80 AVTI-VKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGA 138
VKL E + +AGL ++A++ E A F + G + ++ I+
Sbjct: 158 KQGYKVKLAEISEGDEAGL--KSATLEIEGRYA---FGYLKSEKGTH----RLVRISPFN 208
Query: 139 GGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 198
QTSF+G E+MP+L ++++ V+IP++DLEI+ SRAGGKGGQNVNKVETAVRI H+P
Sbjct: 209 ANGKRQTSFAGIEIMPVLGDDAVKVEIPDKDLEITTSRAGGKGGQNVNKVETAVRIVHLP 268
Query: 199 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 258
TG+ VRCT+ERSQL NK KA++ LKAKLLVIA+EQR EI +IRGD V+A WG QIRNYV
Sbjct: 269 TGIAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQRTQEIAEIRGDMVEAAWGNQIRNYV 328
Query: 259 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
FHPY++VKD+RT ET+D+ VMDG+L+ FI++YL+
Sbjct: 329 FHPYQMVKDLRTNKETTDVSGVMDGDLDSFIEAYLR 364
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 87/144 (60%), Gaps = 2/144 (1%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M + +L++ + S+R+ + + + L ++ +LE AA FW+N+ AQ T+Q L
Sbjct: 1 MIELADLKRSLVMVSERLGKTQEYLDPKTLNAKIFDLEQVAAQPEFWENQDTAQTTMQEL 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
D+K ++ + ++ +DA I +L E D D LL+EA ++ L K LD++EL Q+
Sbjct: 61 NDLKANLDQYEQWHSQFEDAEAIAELLELED--DPALLDEAIQNLETLQKELDRWELQQM 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
LSG YD GAV++I AGAGGTDAQ
Sbjct: 119 LSGEYDNNGAVLTINAGAGGTDAQ 142
>gi|443475640|ref|ZP_21065582.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudanabaena
biceps PCC 7429]
gi|443019475|gb|ELS33558.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudanabaena
biceps PCC 7429]
Length = 368
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/164 (65%), Positives = 135/164 (82%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ QTSF+G EVMPLL EE +D+ I ++LEI+ +RAGGKGGQNVNKVET
Sbjct: 200 LVRISPFNANDKRQTSFAGVEVMPLL-EEDVDLDIDPKELEITTTRAGGKGGQNVNKVET 258
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PTG++VRCT+ERSQL NK A+ LKAKLL+IA+EQRA +I IRGD V+A W
Sbjct: 259 AVRITHLPTGISVRCTQERSQLQNKENAMRLLKAKLLIIAQEQRAQKIADIRGDMVEAAW 318
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIRNYVFHPY+LVKD+RTG ET++I +VMDG+LEPFI+SYL+
Sbjct: 319 GNQIRNYVFHPYQLVKDLRTGEETTNIQNVMDGDLEPFIQSYLR 362
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Query: 33 ELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDS 92
++++LE AA FW+N +AQ+T++ L +K + ++ +++ I +L D
Sbjct: 32 KISDLEQTAAQPEFWENSDQAQKTMRELDALKSYLEKFASWRQTIENLEAIAELLALEDD 91
Query: 93 TDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EA + +L + +++++L QLLSG YDK AV++I AGAGGTD+Q
Sbjct: 92 LAL--ANEAKQSLTQLLQEMERWDLEQLLSGTYDKYDAVLTINAGAGGTDSQ 141
>gi|16331171|ref|NP_441899.1| peptide chain release factor 2 [Synechocystis sp. PCC 6803]
gi|451815327|ref|YP_007451779.1| peptide chain release factor [Synechocystis sp. PCC 6803]
gi|1653665|dbj|BAA18577.1| peptide chain release factor [Synechocystis sp. PCC 6803]
gi|451781296|gb|AGF52265.1| peptide chain release factor [Synechocystis sp. PCC 6803]
Length = 288
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 180/279 (64%), Gaps = 18/279 (6%)
Query: 23 ASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLLTDFKTKMDD 79
A L+QL+KEL E++ S +D + A T+ A TD +D +L T+ +
Sbjct: 16 AETTLEQLQKELDRWELQQLLSGPYDAKG-ATLTINAGAGGTDAQDWAEMLLRMYTRWSE 74
Query: 80 AVTI-VKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS--GPYDKEGAVISITA 136
V L E + +AGL S+ E+ ++ L S G + ++ I+
Sbjct: 75 KQGYKVHLAEISEGDEAGL----KSVTLEIE---GRYAYGYLKSEKGTH----RLVRISP 123
Query: 137 GAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITH 196
QTSF+G EVMPLL EE++ + IP++DL+IS SRAGGKGGQNVNKVETAVRI H
Sbjct: 124 FNANGKRQTSFAGVEVMPLLGEEAISLDIPDKDLDISTSRAGGKGGQNVNKVETAVRIVH 183
Query: 197 IPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRN 256
+PTG+ VRCT+ERSQL NK KAL+ LKAKLL++ EEQRA I +IRGD V+A WG QIRN
Sbjct: 184 LPTGLAVRCTQERSQLQNKEKALAILKAKLLIVLEEQRAQAIAEIRGDMVEAAWGTQIRN 243
Query: 257 YVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
YVFHPY+LVKD+RT ET+D+ VMDGEL FI++YL++
Sbjct: 244 YVFHPYQLVKDLRTNVETTDVGGVMDGELSDFIEAYLRH 282
>gi|7388055|sp|P74476.2|RF2_SYNY3 RecName: Full=Peptide chain release factor 2; Short=RF-2
Length = 372
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 129/152 (84%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMPLL EE++ + IP++DL+IS SRAGGKGGQNVNKVETAVRI H+PTG+ V
Sbjct: 215 QTSFAGVEVMPLLGEEAISLDIPDKDLDISTSRAGGKGGQNVNKVETAVRIVHLPTGLAV 274
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KAL+ LKAKLL++ EEQRA I +IRGD V+A WG QIRNYVFHPY+
Sbjct: 275 RCTQERSQLQNKEKALAILKAKLLIVLEEQRAQAIAEIRGDMVEAAWGTQIRNYVFHPYQ 334
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
LVKD+RT ET+D+ VMDGEL FI++YL++
Sbjct: 335 LVKDLRTNVETTDVGGVMDGELSDFIEAYLRH 366
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 89/142 (62%), Gaps = 2/142 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
+ +L++++E S R+ + + L L+ ++ +LE AA FWD+ +AQ+ LQ L +
Sbjct: 4 ELTDLKRNLELISSRLGQTQDYLDLPGLKAKVQDLEQCAAQPDFWDDTDQAQQILQTLNE 63
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
K ++ ++ + D+ IV+L E D D LL EA + +++L K LD++EL QLLS
Sbjct: 64 TKSQLEQWGIWQQQWQDSQAIVELLELED--DQALLTEAETTLEQLQKELDRWELQQLLS 121
Query: 123 GPYDKEGAVISITAGAGGTDAQ 144
GPYD +GA ++I AGAGGTDAQ
Sbjct: 122 GPYDAKGATLTINAGAGGTDAQ 143
>gi|383322914|ref|YP_005383767.1| peptide chain release factor [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|383326083|ref|YP_005386936.1| peptide chain release factor [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|383491967|ref|YP_005409643.1| peptide chain release factor [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|384437235|ref|YP_005651959.1| peptide chain release factor [Synechocystis sp. PCC 6803]
gi|339274267|dbj|BAK50754.1| peptide chain release factor [Synechocystis sp. PCC 6803]
gi|359272233|dbj|BAL29752.1| peptide chain release factor [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|359275403|dbj|BAL32921.1| peptide chain release factor [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|359278573|dbj|BAL36090.1| peptide chain release factor [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|407961451|dbj|BAM54691.1| peptide chain release factor 2 [Synechocystis sp. PCC 6803]
Length = 335
Score = 231 bits (588), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 180/279 (64%), Gaps = 18/279 (6%)
Query: 23 ASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLLTDFKTKMDD 79
A L+QL+KEL E++ S +D + A T+ A TD +D +L T+ +
Sbjct: 63 AETTLEQLQKELDRWELQQLLSGPYDAKG-ATLTINAGAGGTDAQDWAEMLLRMYTRWSE 121
Query: 80 AVTI-VKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS--GPYDKEGAVISITA 136
V L E + +AGL S+ E+ ++ L S G + ++ I+
Sbjct: 122 KQGYKVHLAEISEGDEAGL----KSVTLEIE---GRYAYGYLKSEKGTH----RLVRISP 170
Query: 137 GAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITH 196
QTSF+G EVMPLL EE++ + IP++DL+IS SRAGGKGGQNVNKVETAVRI H
Sbjct: 171 FNANGKRQTSFAGVEVMPLLGEEAISLDIPDKDLDISTSRAGGKGGQNVNKVETAVRIVH 230
Query: 197 IPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRN 256
+PTG+ VRCT+ERSQL NK KAL+ LKAKLL++ EEQRA I +IRGD V+A WG QIRN
Sbjct: 231 LPTGLAVRCTQERSQLQNKEKALAILKAKLLIVLEEQRAQAIAEIRGDMVEAAWGTQIRN 290
Query: 257 YVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
YVFHPY+LVKD+RT ET+D+ VMDGEL FI++YL++
Sbjct: 291 YVFHPYQLVKDLRTNVETTDVGGVMDGELSDFIEAYLRH 329
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 70/108 (64%), Gaps = 2/108 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E AA FWD+ +AQ+ LQ L + K ++ ++ + D+ IV+L E D D
Sbjct: 1 MEQCAAQPDFWDDTDQAQQILQTLNETKSQLEQWGIWQQQWQDSQAIVELLELED--DQA 58
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
LL EA + +++L K LD++EL QLLSGPYD +GA ++I AGAGGTDAQ
Sbjct: 59 LLTEAETTLEQLQKELDRWELQQLLSGPYDAKGATLTINAGAGGTDAQ 106
>gi|354565707|ref|ZP_08984881.1| Peptide chain release factor 2 [Fischerella sp. JSC-11]
gi|353548580|gb|EHC18025.1| Peptide chain release factor 2 [Fischerella sp. JSC-11]
Length = 372
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 185/280 (66%), Gaps = 23/280 (8%)
Query: 23 ASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLLTDFKTKM-D 78
A A + +L +EL + E++ S +D++ A T+ A TD +D +L T+ +
Sbjct: 98 AEATVTKLNRELDQWELQQLLSGPYDDKG-AVLTINAGAGGTDAQDWAEMLLRMYTRWAE 156
Query: 79 DAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKE----GAVISI 134
+ V LT+E + +AG+ ++A+I E+T + Y + ++ I
Sbjct: 157 NHGYKVNLTDESEGDEAGI--KSATI-----------EITGRYAYGYLRSETGTHRLVRI 203
Query: 135 TAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 194
+ QTSF+G EVMP L + S+ ++IPE+DLEI+ SR+GGKGGQNVNKVETAVRI
Sbjct: 204 SPFNANGKRQTSFAGVEVMPQL-DNSVQLEIPEKDLEITTSRSGGKGGQNVNKVETAVRI 262
Query: 195 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 254
HIPTG+ VRCTEERSQL NK KAL+RLKAKLLVIA+EQ A EI +IRGD V+A WG QI
Sbjct: 263 VHIPTGIAVRCTEERSQLQNKEKALARLKAKLLVIAQEQHAKEIAEIRGDMVEASWGNQI 322
Query: 255 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
RNYVFHPY++VKD+RT ET+ I VM+GEL+ FI++YL+
Sbjct: 323 RNYVFHPYQMVKDLRTNVETTAIADVMNGELDMFIQAYLR 362
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 87/138 (63%), Gaps = 2/138 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L++++E DR+ + + + L ++ +LE AA FW+++ +AQ TLQ L D+K
Sbjct: 6 LKREIETLCDRLGKTQDYLDIPALTAKIQDLEQIAAQPEFWEDQVKAQGTLQELNDLKAH 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ +++ ++D +++L E L+EA + + +LN+ LDQ+EL QLLSGPYD
Sbjct: 66 LQQYEQWQSSLEDTKAVLELLELETDEAL--LQEAEATVTKLNRELDQWELQQLLSGPYD 123
Query: 127 KEGAVISITAGAGGTDAQ 144
+GAV++I AGAGGTDAQ
Sbjct: 124 DKGAVLTINAGAGGTDAQ 141
>gi|282898121|ref|ZP_06306116.1| Peptide chain release factor 2 [Raphidiopsis brookii D9]
gi|281197265|gb|EFA72166.1| Peptide chain release factor 2 [Raphidiopsis brookii D9]
Length = 290
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 132/281 (46%), Positives = 179/281 (63%), Gaps = 25/281 (8%)
Query: 23 ASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLLTDFKTKMDD 79
A + Q+ ++L + E++ S +D++ A T+ A TD +D +L T+ +
Sbjct: 16 AETTINQMHRDLDQWELQQLLSGPYDSQG-AVLTINAGAGGTDAQDWAFMLMRMYTRWAE 74
Query: 80 AVTI-VKLTEEMDSTDAGLLEEAASIIKE-----LNKALDQFELTQLLSGPYDKEGAVIS 133
A V L EE + +AG+ I L + L ++ P++ G
Sbjct: 75 AHGYKVTLAEESEGDEAGIKSATLEITGRYAYGYLRAEMGTHRLVRI--SPFNANG---- 128
Query: 134 ITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVR 193
QTSF+G EVMP + + S+ ++IPE+DLE++ SRAGGKGGQNVNKVETAVR
Sbjct: 129 --------KRQTSFAGVEVMPQI-DNSVTLEIPEKDLEVTTSRAGGKGGQNVNKVETAVR 179
Query: 194 ITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQ 253
I HIPTG+ VRCTEERSQL NK KAL+RLKAKLLVIA EQRA EI +IRGD V+A WG Q
Sbjct: 180 IVHIPTGIAVRCTEERSQLQNKEKALARLKAKLLVIAREQRAQEIAEIRGDMVEASWGNQ 239
Query: 254 IRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
IRNYVFHPY++VKD+RT ET+ I+ VM+G+L+ FI++YL+
Sbjct: 240 IRNYVFHPYQIVKDLRTNLETTAIIDVMNGDLDNFIQAYLR 280
>gi|209527406|ref|ZP_03275912.1| peptide chain release factor 2 [Arthrospira maxima CS-328]
gi|376006049|ref|ZP_09783392.1| Peptide chain release factor 2 (RF-2) [Arthrospira sp. PCC 8005]
gi|423067877|ref|ZP_17056667.1| peptide chain release factor 2 [Arthrospira platensis C1]
gi|209492141|gb|EDZ92490.1| peptide chain release factor 2 [Arthrospira maxima CS-328]
gi|375325573|emb|CCE19145.1| Peptide chain release factor 2 (RF-2) [Arthrospira sp. PCC 8005]
gi|406710620|gb|EKD05827.1| peptide chain release factor 2 [Arthrospira platensis C1]
Length = 339
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 103/151 (68%), Positives = 130/151 (86%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G E+MP+L E ++++ IPE+DLEI+ SRAGGKGGQNVNKVETAVRI HIPTG+ V
Sbjct: 178 QTSFAGVEIMPILDEGAINLDIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHIPTGIAV 237
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL N+ KA++ LKAKLLV+A+EQRA I +IRGD V+A WG QIRNYVFHPY+
Sbjct: 238 RCTQERSQLQNREKAMALLKAKLLVVAQEQRAQAIAEIRGDLVEAAWGNQIRNYVFHPYQ 297
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RTG ET+ I VM+GEL+ FI++YL+
Sbjct: 298 MVKDLRTGEETTAINDVMNGELDGFIQAYLR 328
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 73/108 (67%), Gaps = 2/108 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E AA +FWD++ +AQ+TLQ L+D+K + D++ ++D I +L E D D
Sbjct: 1 MEQLAAQPNFWDDQTQAQKTLQTLSDLKSVLQQQQDWRKTLEDTGAIAELLELED--DES 58
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L +EA S + L + +D++EL QLLSGPYD+ GAV++I AGAGGTDAQ
Sbjct: 59 LRQEAESNVVHLGRDIDRWELQQLLSGPYDRSGAVLTINAGAGGTDAQ 106
>gi|291568918|dbj|BAI91190.1| peptide chain release factor 2 [Arthrospira platensis NIES-39]
Length = 316
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 103/151 (68%), Positives = 130/151 (86%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G E+MP+L E ++++ IPE+DLEI+ SRAGGKGGQNVNKVETAVRI HIPTG+ V
Sbjct: 155 QTSFAGVEIMPILDEGAINLDIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHIPTGIAV 214
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL N+ KA++ LKAKLLV+A+EQRA I +IRGD V+A WG QIRNYVFHPY+
Sbjct: 215 RCTQERSQLQNREKAMALLKAKLLVVAQEQRAQAIAEIRGDLVEAAWGNQIRNYVFHPYQ 274
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RTG ET+ I VM+GEL+ FI++YL+
Sbjct: 275 MVKDLRTGEETTAINDVMNGELDGFIQAYLR 305
>gi|282900531|ref|ZP_06308475.1| Peptide chain release factor 2 [Cylindrospermopsis raciborskii
CS-505]
gi|281194584|gb|EFA69537.1| Peptide chain release factor 2 [Cylindrospermopsis raciborskii
CS-505]
Length = 291
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 134/281 (47%), Positives = 178/281 (63%), Gaps = 25/281 (8%)
Query: 23 ASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLLTDFKTKMDD 79
A + Q+ ++L + E++ S +D++ A T+ A TD +D +L T+ +
Sbjct: 17 AETTINQMHRDLDQWELQQLLSGPYDSQG-AVLTINAGAGGTDAQDWAFMLMRMYTRWAE 75
Query: 80 AVTI-VKLTEEMDSTDAGLLEEAASIIKE-----LNKALDQFELTQLLSGPYDKEGAVIS 133
A V L EE + +AG+ I L + L ++ P++ G
Sbjct: 76 AHGYKVTLAEESEGDEAGIKSATLEITGRYAYGYLRAEMGTHRLVRI--SPFNANG---- 129
Query: 134 ITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVR 193
QTSF+G EVMP + + S+ ++IPE+DLEI+ SRAGGKGGQNVNKVETAVR
Sbjct: 130 --------KRQTSFAGVEVMPQI-DNSVTLEIPEKDLEITTSRAGGKGGQNVNKVETAVR 180
Query: 194 ITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQ 253
I HIPTGV VRCTEERSQL NK KAL+RLKAKLLVIA EQRA EI +IRGD V+A WG Q
Sbjct: 181 IVHIPTGVAVRCTEERSQLQNKEKALARLKAKLLVIAREQRAQEIAEIRGDMVEASWGNQ 240
Query: 254 IRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
IRNYVFHPY++VKD+RT ET+ I VM+G+L+ FI++YL+
Sbjct: 241 IRNYVFHPYQIVKDLRTNLETTAIGDVMNGDLDNFIQAYLR 281
>gi|409993206|ref|ZP_11276356.1| peptide chain release factor 2 [Arthrospira platensis str. Paraca]
gi|409935920|gb|EKN77434.1| peptide chain release factor 2 [Arthrospira platensis str. Paraca]
Length = 309
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/151 (68%), Positives = 130/151 (86%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G E+MP+L E ++++ IPE+DLEI+ SRAGGKGGQNVNKVETAVRI HIPTG+ V
Sbjct: 148 QTSFAGVEIMPILDEGAINLDIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHIPTGIAV 207
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL N+ KA++ LKAKLLV+A+EQRA I +IRGD V+A WG QIRNYVFHPY+
Sbjct: 208 RCTQERSQLQNREKAMALLKAKLLVVAQEQRAQAIAEIRGDLVEAAWGNQIRNYVFHPYQ 267
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RTG ET+ I VM+GEL+ FI++YL+
Sbjct: 268 MVKDLRTGEETTAINDVMNGELDGFIQAYLR 298
>gi|186681801|ref|YP_001864997.1| peptide chain release factor 2 [Nostoc punctiforme PCC 73102]
gi|186464253|gb|ACC80054.1| peptide chain release factor 2 [Nostoc punctiforme PCC 73102]
Length = 289
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/240 (51%), Positives = 160/240 (66%), Gaps = 21/240 (8%)
Query: 61 TDVKDKINLLTDFKTKMDDAVTI-VKLTEEMDSTDAGLLEEAASIIKE-----LNKALDQ 114
TD +D +L T+ +A V L EE + +AG+ I L +
Sbjct: 54 TDAQDWAFMLMRMYTRWGEAHGYKVTLAEESEGDEAGIKSATLEITGRYAYGYLRSEMGT 113
Query: 115 FELTQLLSGPYDKEGAVISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 174
L ++ P++ G QTSF+G EVMP + + S+ ++IP++DLEI+
Sbjct: 114 HRLVRI--SPFNANG------------KRQTSFAGVEVMPQI-DNSVQLEIPDKDLEITT 158
Query: 175 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 234
+R+GGKGGQNVNKVETAVRI HIPTG+ VRCTEERSQL NK KAL+RLKAKLLVIA+EQR
Sbjct: 159 TRSGGKGGQNVNKVETAVRIVHIPTGLAVRCTEERSQLQNKEKALNRLKAKLLVIAKEQR 218
Query: 235 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
A EI +IRGD V+A WG QIRNYVFHPY++VKD+RT ET+ I VM+GEL+PFI++YL+
Sbjct: 219 AQEIAEIRGDMVEASWGNQIRNYVFHPYQMVKDLRTNTETTAIGDVMNGELDPFIQAYLR 278
>gi|428300612|ref|YP_007138918.1| peptide chain release factor 2 (bRF-2) [Calothrix sp. PCC 6303]
gi|428237156|gb|AFZ02946.1| bacterial peptide chain release factor 2 (bRF-2) [Calothrix sp. PCC
6303]
Length = 372
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/161 (68%), Positives = 133/161 (82%), Gaps = 1/161 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP + + S+ + IPE+DL+I+ SRAGGKGGQNVNKVETAVR+ HIPTGV V
Sbjct: 213 QTSFAGVEVMPQI-DSSVQLDIPEKDLDITTSRAGGKGGQNVNKVETAVRVVHIPTGVAV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQL NK KAL+RLKAKLLVIA+EQRA EI +IRGD V A WG QIRNYVFHPY+
Sbjct: 272 RCTEERSQLQNKEKALARLKAKLLVIAKEQRAKEIAEIRGDMVDASWGNQIRNYVFHPYQ 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSAS 304
LVKD+RT ET+ I VM+GEL+ FI++YL+ + + SAS
Sbjct: 332 LVKDLRTNVETTAIGDVMNGELDQFIQTYLRQENQLVESAS 372
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 90/142 (63%), Gaps = 2/142 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
D +++++EA S R+ + + + L ++ +LE +A FW+++ EAQ+TL+ L +
Sbjct: 2 DVLEIKREIEALSRRLGKTQDYLDIPALTAKIQDLEQISAQPEFWNDQTEAQQTLRELDE 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+K ++ + + ++D +V+L E TD GLLEEA S + LN+ LDQ+EL QLLS
Sbjct: 62 LKVHLSQYHGWLSSVEDTRAVVELLEL--ETDEGLLEEATSTVIRLNRELDQWELEQLLS 119
Query: 123 GPYDKEGAVISITAGAGGTDAQ 144
YD GAV++I AGAGGTDAQ
Sbjct: 120 NEYDHLGAVLTINAGAGGTDAQ 141
>gi|428773350|ref|YP_007165138.1| peptide chain release factor 2 (bRF-2) [Cyanobacterium stanieri PCC
7202]
gi|428687629|gb|AFZ47489.1| bacterial peptide chain release factor 2 (bRF-2) [Cyanobacterium
stanieri PCC 7202]
Length = 368
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/279 (48%), Positives = 179/279 (64%), Gaps = 20/279 (7%)
Query: 23 ASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLL----TDFKT 75
A L +L +EL E++ S +D R A T+ A TD +D +L T +
Sbjct: 99 AEHNLTRLAQELDRWELRKLLSGPYDQRG-AVLTINAGAGGTDAQDWAQMLLRMYTRWAE 157
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
K D VT+ ++E +AG IK ++ ++ L G ++ I+
Sbjct: 158 KQDYKVTLTDMSE---GDEAG--------IKSVSLEIEGRYAFGYLRGEKGTH-RLVRIS 205
Query: 136 AGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRIT 195
QTSF+G +VMPLL E++DV IP++DLE++ SRAGGKGGQNVNKVETAVRI
Sbjct: 206 PFNANGKRQTSFAGVDVMPLLENEALDVDIPDKDLEVTTSRAGGKGGQNVNKVETAVRIV 265
Query: 196 HIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIR 255
H+PTG+ VRCT+ERSQL NK KAL+ LKAKLLVIA+EQ+ EI +IRGD V+A WG QIR
Sbjct: 266 HLPTGIAVRCTQERSQLQNKEKALAILKAKLLVIAQEQKIQEIAEIRGDIVEAAWGMQIR 325
Query: 256 NYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
NYVFHPY++VKD+RT ET+ I +VMDG+L+ FI++YLK
Sbjct: 326 NYVFHPYQMVKDLRTNVETNAIDNVMDGDLDAFIEAYLK 364
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 83/139 (59%), Gaps = 1/139 (0%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L++++ ++R+ + + L+ + +LE A+ FWD +AQ+ LQ L ++K
Sbjct: 5 DLKREISVITERLSTTQDYLDIPSLKANIHDLEQVASQPQFWDEADKAQKILQDLNELKS 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
+ +T ++ ++D IV+L E + E ++ + L + LD++EL +LLSGPY
Sbjct: 65 SLAQITRWQKSLEDTKAIVELLELEEEDLELFTEAEHNLTR-LAQELDRWELRKLLSGPY 123
Query: 126 DKEGAVISITAGAGGTDAQ 144
D+ GAV++I AGAGGTDAQ
Sbjct: 124 DQRGAVLTINAGAGGTDAQ 142
>gi|119511140|ref|ZP_01630258.1| peptide chain release factor 2 [Nodularia spumigena CCY9414]
gi|119464235|gb|EAW45154.1| peptide chain release factor 2 [Nodularia spumigena CCY9414]
Length = 288
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 105/151 (69%), Positives = 129/151 (85%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G E+MP L + S+ ++IPE+DLEI+ SRAGGKGGQNVNKVETAVRI H+PTG+ V
Sbjct: 128 QTSFAGVEIMPQL-DHSVQLEIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHLPTGIAV 186
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQL NK KAL+RLKAKLLVIA EQ+A E+ +IRGD V+A WG QIRNYVFHPY+
Sbjct: 187 RCTEERSQLQNKDKALARLKAKLLVIAREQKAQEVAEIRGDMVEASWGNQIRNYVFHPYQ 246
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT ET+ I VMDG+L+ FI++YL+
Sbjct: 247 MVKDLRTNVETTAISDVMDGDLDSFIQAYLR 277
>gi|384249824|gb|EIE23305.1| peptide chain release factor 2 [Coccomyxa subellipsoidea C-169]
Length = 368
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 101/157 (64%), Positives = 130/157 (82%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EVMP+L E++ V+IPE DLEI+ +R+ G GGQNVNK+ET VRI HIPTG+ V
Sbjct: 210 QTSFAAVEVMPILGEKATQVEIPESDLEITTTRSQGAGGQNVNKLETCVRIKHIPTGIAV 269
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RC ++RSQL NK A+ +LKAKL+V+ +EQ+A EI +IRGD VKAEWGQQIRNYVFHPYK
Sbjct: 270 RCQQQRSQLQNKALAMEQLKAKLVVVQQEQQAREIAEIRGDIVKAEWGQQIRNYVFHPYK 329
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 300
LVKDVRTG ETSD+ VMDG+++ F+++YL++K +S
Sbjct: 330 LVKDVRTGMETSDVPGVMDGDIDQFVQAYLRHKGRLS 366
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 75/130 (57%), Gaps = 3/130 (2%)
Query: 14 ASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDF 73
A+ +VEE L L + A LE A+D +FW+++ AQ TLQ ++++K + + F
Sbjct: 6 AAKQVEEAAHVTNLISLRDQYAALEQAASDGAFWEDQESAQATLQQMSELKGIVQEVEGF 65
Query: 74 KTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVIS 133
+ + D T ++L EM++ L E ++ L K L ++EL +LL G YDK A +S
Sbjct: 66 QGLLGDVQTAIELA-EMEAGPFCL--EGVEALERLQKGLARWELQRLLGGEYDKGSATLS 122
Query: 134 ITAGAGGTDA 143
I AGAGGTDA
Sbjct: 123 IQAGAGGTDA 132
>gi|88809865|ref|ZP_01125371.1| peptide chain release factor 2 [Synechococcus sp. WH 7805]
gi|88786249|gb|EAR17410.1| peptide chain release factor 2 [Synechococcus sp. WH 7805]
Length = 356
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 105/151 (69%), Positives = 129/151 (85%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP L EE +D+ IP++DLE++ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 195 QTSFAGVEVMPKL-EEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAV 253
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KA++ LKAKLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT ET+D+ VMDG+LEPFI++ L+
Sbjct: 314 MVKDLRTQEETNDVQGVMDGDLEPFIQALLR 344
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 69/109 (63%), Gaps = 2/109 (1%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE AA FWD++ AQ+ ++ L +VK + L ++ + DA ++L + D
Sbjct: 17 DLEQLAAQPDFWDDQQNAQKQMRRLDEVKAMLQQLETWQGAVSDAQATLELYDL--EPDE 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+L EA + +L + LD++EL +LLSG YDKEGAV+SI AGAGGTDAQ
Sbjct: 75 DMLGEAQGGLNQLRRDLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQ 123
>gi|148243347|ref|YP_001228504.1| peptide chain release factor 2, partial [Synechococcus sp. RCC307]
gi|147851657|emb|CAK29151.1| Protein chain release factor B [Synechococcus sp. RCC307]
Length = 349
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 104/151 (68%), Positives = 130/151 (86%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP L EE +D++IP++DLE++ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 189 QTSFAGVEVMPKL-EEEVDLEIPDKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAV 247
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KA++ LK+KLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 248 RCTQERSQLQNKEKAMALLKSKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 307
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT ET+D+ VMDG+L+PFI+S L+
Sbjct: 308 MVKDLRTNEETTDVQGVMDGDLDPFIQSLLR 338
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 76/109 (69%), Gaps = 2/109 (1%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE AA FWD++ A++ ++ L DVK ++ L ++ +DDA ++L +++ DA
Sbjct: 11 DLEQLAAQPDFWDDQNNARKQMRQLDDVKAQLEQLRTWRASVDDAAATLELY-DLEPDDA 69
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
LLEEA ++EL ALD++EL +LLSG YD+EGAVISI AGAGGTDAQ
Sbjct: 70 -LLEEANGGLQELRLALDRWELERLLSGTYDQEGAVISINAGAGGTDAQ 117
>gi|81299215|ref|YP_399423.1| peptide chain release factor 2 [Synechococcus elongatus PCC 7942]
gi|81168096|gb|ABB56436.1| bacterial peptide chain release factor 2 (bRF-2) [Synechococcus
elongatus PCC 7942]
Length = 304
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 106/161 (65%), Positives = 131/161 (81%), Gaps = 1/161 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP+L + +D++IPE+DLEI+ SRAGGKGGQNVNKVETAVRI H+PTG+ V
Sbjct: 144 QTSFAGVEVMPVL-DTDIDLEIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHLPTGLAV 202
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQL NK KAL LKAKLLV+ +EQ+A E+ +IRGD V+A WG QIRNYVFHPY+
Sbjct: 203 RCTEERSQLQNKEKALVILKAKLLVVLQEQKAKEVAEIRGDMVEAAWGNQIRNYVFHPYQ 262
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSAS 304
LVKD+RTG ET I VM+G+L PFI++YL+ M + +
Sbjct: 263 LVKDLRTGVETKAIADVMNGDLNPFIQAYLRQDNQMLIETT 303
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%)
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D L EEA + ++ L + LDQ+EL QLLSGPYD EGA++SI AGAGGTDAQ
Sbjct: 22 DPALFEEAETNVQRLQRELDQWELQQLLSGPYDAEGAILSINAGAGGTDAQ 72
>gi|428779410|ref|YP_007171196.1| peptide chain release factor 2 [Dactylococcopsis salina PCC 8305]
gi|428693689|gb|AFZ49839.1| peptide chain release factor 2 [Dactylococcopsis salina PCC 8305]
Length = 367
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/290 (43%), Positives = 179/290 (61%), Gaps = 28/290 (9%)
Query: 32 KELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMD 91
K + EL AD + W+ EA E LQ L D+ L D+ ++ +
Sbjct: 80 KAILELLETEADHALWE---EATENLQTLNQALDRWELQQLLSDPYDERGAVLTINTGAG 136
Query: 92 STDAG-----LLEEAASIIKELNKALDQFELTQ-----LLSGPYDKEGA----------- 130
TDA LL + ++ ++ EL++ + S + EG
Sbjct: 137 GTDAQDWAQMLLRMYSRWGEKQGYTVNLAELSEGDEAGIKSATLEIEGRYGYGYLKGEKG 196
Query: 131 ---VISITAGAGGTDAQTSFSGAEVMPLLPEESM-DVQIPEEDLEISFSRAGGKGGQNVN 186
++ I+ QTSF+G EVMP+L + ++ D+++PE+DLEI+ SRAGGKGGQNVN
Sbjct: 197 THRLVRISPYNANGKRQTSFAGVEVMPMLDQTTIQDIELPEKDLEITTSRAGGKGGQNVN 256
Query: 187 KVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAV 246
KVETAVR+ H+PTG+ VRCT+ERSQL N+ KA++ LK+KL+VIA+EQRA +I +IRGDAV
Sbjct: 257 KVETAVRVVHLPTGIAVRCTQERSQLQNREKAIALLKSKLIVIAQEQRAQKIAEIRGDAV 316
Query: 247 KAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+A WG QIRNYVFHPY++VKD+RT ETS + V+DGE+ PF+++YL+ K
Sbjct: 317 EAAWGNQIRNYVFHPYQMVKDLRTNVETSAVEDVLDGEINPFVEAYLRSK 366
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 84/138 (60%), Gaps = 2/138 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L++++E S R+ + + L ++ ++ +LE +AA FWD+ AQ TLQ L D+K
Sbjct: 6 LKREMETISQRLGKAQEYLDLPLIQAQIEDLEQQAAQPEFWDDPETAQGTLQKLNDLKSA 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
++ + +D I++L E D L EEA ++ LN+ALD++EL QLLS PYD
Sbjct: 66 WEQYQKWRDRAEDTKAILELLE--TEADHALWEEATENLQTLNQALDRWELQQLLSDPYD 123
Query: 127 KEGAVISITAGAGGTDAQ 144
+ GAV++I GAGGTDAQ
Sbjct: 124 ERGAVLTINTGAGGTDAQ 141
>gi|317968157|ref|ZP_07969547.1| peptide chain release factor 2 [Synechococcus sp. CB0205]
Length = 356
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/162 (66%), Positives = 133/162 (82%), Gaps = 1/162 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP + EE + + IPE+DLEI+ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 195 QTSFAGVEVMPKI-EEEVKLDIPEKDLEITTSRSGGAGGQNVNKVETAVRILHIPTGLFV 253
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KA++ L AKLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASD 305
+VKD+RT HET+D+ VMDG+L+PFI+S L ++ ++SD
Sbjct: 314 MVKDLRTQHETTDVQGVMDGDLDPFIQSLLHAGVEVAGASSD 355
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 70/109 (64%), Gaps = 2/109 (1%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE A+ FWD++ AQ ++ L +VK ++ L+ +K + DA V++ D
Sbjct: 17 DLEQLASQPDFWDDQKLAQSKMRQLDEVKAQLEQLSQWKGAVADAEATVEIYGL--EPDD 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
LL E+ + +K+L LD++EL +LLSG YDKEGAVISI AGAGGTDAQ
Sbjct: 75 ELLSESDAALKKLRADLDRWELERLLSGTYDKEGAVISINAGAGGTDAQ 123
>gi|17227769|ref|NP_484317.1| peptide chain release factor 2 [Nostoc sp. PCC 7120]
gi|17135251|dbj|BAB77797.1| peptide chain release factor [Nostoc sp. PCC 7120]
Length = 292
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/151 (68%), Positives = 129/151 (85%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP L + ++ + IP++DLEI+ +R+GGKGGQNVNKVETAVR+ H+PTG+ V
Sbjct: 132 QTSFAGVEVMPQL-DNTVQLDIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAV 190
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQL NK KAL+RLKAKLLVIA+EQ+A EI QIRGD V+A WG QIRNYVFHPY+
Sbjct: 191 RCTEERSQLQNKEKALARLKAKLLVIAQEQKAQEIAQIRGDMVEASWGNQIRNYVFHPYQ 250
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT ET+ I VM+GEL+ FI+SYL+
Sbjct: 251 MVKDLRTNVETTAIADVMNGELDMFIQSYLR 281
>gi|427704047|ref|YP_007047269.1| peptide chain release factor 2 [Cyanobium gracile PCC 6307]
gi|427347215|gb|AFY29928.1| peptide chain release factor 2 [Cyanobium gracile PCC 6307]
Length = 355
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/161 (65%), Positives = 132/161 (81%), Gaps = 1/161 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP L EE + + IPE+DLE++ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 195 QTSFAGVEVMPKL-EEEVKLDIPEKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAV 253
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KA++ L AKLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSAS 304
+VKD+RTG ET+D+ VMDG+L+PFI+S L+ ++ A+
Sbjct: 314 MVKDLRTGEETTDVQGVMDGDLDPFIQSLLRQGVEIAADAA 354
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE A+ FWD++ +AQ+ ++ L +VK ++ L ++ +DDA ++L + D
Sbjct: 17 DLEQLASQPGFWDDQQQAQKQMRQLDEVKAQLEQLQQWQAAIDDARATLELYDL--EPDE 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
LL EA ++ L ALD++EL +LLSGPYDKEGAVISI AGAGGTDAQ
Sbjct: 75 ELLGEANGGLQSLKGALDRWELERLLSGPYDKEGAVISINAGAGGTDAQ 123
>gi|75908996|ref|YP_323292.1| peptide chain release factor 2 [Anabaena variabilis ATCC 29413]
gi|75702721|gb|ABA22397.1| bacterial peptide chain release factor 2 (bRF-2) [Anabaena
variabilis ATCC 29413]
Length = 292
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/151 (68%), Positives = 129/151 (85%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP L + ++ + IP++DLEI+ +R+GGKGGQNVNKVETAVR+ H+PTG+ V
Sbjct: 132 QTSFAGVEVMPQL-DNTVQLDIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAV 190
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQL NK KAL+RLKAKLLVIA+EQ+A EI QIRGD V+A WG QIRNYVFHPY+
Sbjct: 191 RCTEERSQLQNKEKALARLKAKLLVIAQEQKAQEIAQIRGDMVEASWGNQIRNYVFHPYQ 250
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT ET+ I VM+GEL+ FI++YL+
Sbjct: 251 MVKDLRTNAETTAIADVMNGELDMFIQAYLR 281
>gi|56751121|ref|YP_171822.1| peptide chain release factor 2 [Synechococcus elongatus PCC 6301]
gi|56686080|dbj|BAD79302.1| peptide chain release factor RF-2 [Synechococcus elongatus PCC
6301]
Length = 304
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/161 (65%), Positives = 131/161 (81%), Gaps = 1/161 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP+L + +D++IPE+DLEI+ SRAGGKGGQNVNKVETAVRI H+PTG+ V
Sbjct: 144 QTSFAGVEVMPVL-DTDIDLEIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHLPTGLAV 202
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQL NK KAL L+AKLLV+ +EQ+A E+ +IRGD V+A WG QIRNYVFHPY+
Sbjct: 203 RCTEERSQLQNKEKALVILRAKLLVVLQEQKAKEVAEIRGDMVEAAWGNQIRNYVFHPYQ 262
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSAS 304
LVKD+RTG ET I VM+G+L PFI++YL+ M + +
Sbjct: 263 LVKDLRTGVETKAIADVMNGDLNPFIQAYLRQDNQMLIETT 303
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%)
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D L EEA + ++ L + LDQ+EL QLLSGPYD EGA++SI AGAGGTDAQ
Sbjct: 22 DPALFEEAETNVQRLQRELDQWELQQLLSGPYDAEGAILSINAGAGGTDAQ 72
>gi|148240661|ref|YP_001226048.1| peptide chain release factor 2 [Synechococcus sp. WH 7803]
gi|147849200|emb|CAK24751.1| Protein chain release factor B [Synechococcus sp. WH 7803]
Length = 356
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/151 (68%), Positives = 129/151 (85%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP L EE +D+ IP++DLE++ SR+GG GGQNVNKVETAVRI H+PTG+ V
Sbjct: 195 QTSFAGVEVMPKL-EEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAVRILHVPTGLAV 253
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KA++ LKAKLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT ET+D+ VMDG+L+PFI++ L+
Sbjct: 314 MVKDLRTQEETNDVQGVMDGDLDPFIQALLR 344
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 70/109 (64%), Gaps = 2/109 (1%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE AA FWD++ AQ+ ++ L +VK + L ++ + DA ++L + D
Sbjct: 17 DLEQLAAQPDFWDDQQNAQKQMRRLDEVKAMLQQLDTWQGAVSDAQATLELYDL--EPDD 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+L EA S + +L + LD++EL +LLSG YDKEGAV+SI AGAGGTDAQ
Sbjct: 75 DMLGEAQSGLTQLRRDLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQ 123
>gi|427721077|ref|YP_007069071.1| peptide chain release factor 2 [Calothrix sp. PCC 7507]
gi|427353513|gb|AFY36237.1| peptide chain release factor 2 [Calothrix sp. PCC 7507]
Length = 370
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 103/151 (68%), Positives = 129/151 (85%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP + + S+ + IPE+DLEI+ +R+GGKGGQNVNKVETAVR+ H+PTG+ V
Sbjct: 213 QTSFAGVEVMPQI-DNSVQLDIPEKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGLAV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQL NK KAL+RLKAKLLVIA+EQRA EI +IRGD V+A WG QIRNYVFHPY+
Sbjct: 272 RCTEERSQLQNKEKALARLKAKLLVIAQEQRAQEIAEIRGDMVEASWGNQIRNYVFHPYQ 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT ET+ I VM+G+L+ FI++YL+
Sbjct: 332 MVKDLRTNTETTGISDVMNGDLDTFIQAYLR 362
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
D +++++E S R+ + + + L ++ +LE +A FW ++ +AQ+TLQ L +
Sbjct: 2 DVLEIKREIETLSSRLGKTQDYLDVPALTAKIQDLEQISAQPEFWVDQTQAQQTLQELNN 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+KD + + ++D +V+L E TD GLL+EA S I +LN+ LDQ+EL QLLS
Sbjct: 62 LKDHLAQYHQWHVSLEDTKAVVELLEL--ETDEGLLQEAESTITKLNRELDQWELQQLLS 119
Query: 123 GPYDKEGAVISITAGAGGTDAQ 144
G YD EGAV++I+AGAGGTDAQ
Sbjct: 120 GLYDAEGAVLTISAGAGGTDAQ 141
>gi|307111728|gb|EFN59962.1| hypothetical protein CHLNCDRAFT_133064 [Chlorella variabilis]
Length = 426
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 102/153 (66%), Positives = 125/153 (81%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EVMP+L E +V++PE DLEI+ R+ G GGQNVNKVETAVRI H+PTG+ V
Sbjct: 255 QTSFAAVEVMPMLGELVDEVELPESDLEITTMRSAGAGGQNVNKVETAVRIKHLPTGIAV 314
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK AL LKAKLLV+A+EQ+ E+ +IRGD VKAEWGQQIRNYVFHPYK
Sbjct: 315 KCQMERSQAQNKSIALGMLKAKLLVVAQEQQLQEVAEIRGDLVKAEWGQQIRNYVFHPYK 374
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKDVRTG ETSD+ VMDGEL+PF+++YL+++
Sbjct: 375 LVKDVRTGQETSDVAGVMDGELQPFMQAYLQHR 407
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 80/144 (55%), Gaps = 1/144 (0%)
Query: 2 QDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALT 61
Q L++ + +R+++ A L L++ +AELE A S W+ RA A LQ LT
Sbjct: 40 QSLGILKRRQQELQERIQDAVKVADLPSLKRRMAELEEAAGASDLWEQRARATAVLQQLT 99
Query: 62 DVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA-SIIKELNKALDQFELTQL 120
+++++ L F +++D ++L E D A + A SI L L+ +EL +L
Sbjct: 100 ALREEVAALERFCGQLEDLGVAMELLEMEDEAGAQAMAAEAGSICDGLAAGLEAWELRRL 159
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
L GPYD GAV++I AGAGGTDAQ
Sbjct: 160 LGGPYDDRGAVLTIQAGAGGTDAQ 183
>gi|428770307|ref|YP_007162097.1| peptide chain release factor 2 (bRF-2) [Cyanobacterium aponinum PCC
10605]
gi|428684586|gb|AFZ54053.1| bacterial peptide chain release factor 2 (bRF-2) [Cyanobacterium
aponinum PCC 10605]
Length = 368
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 105/151 (69%), Positives = 124/151 (82%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G +VMP L EE++ + IPE+DLE++ SRAGGKGGQNVNKVETAVRI HIPTG+ V
Sbjct: 213 QTSFAGVDVMPSLGEEAIKIDIPEKDLEVTTSRAGGKGGQNVNKVETAVRIVHIPTGIAV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KAL+ LK KLLVI EEQRA I IRGD V+A WG QIRNYVFHPY+
Sbjct: 273 RCTQERSQLQNKEKALAILKGKLLVILEEQRAKAIADIRGDIVEAAWGNQIRNYVFHPYQ 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKDVRT ET+ + V+DG LE FI++YL+
Sbjct: 333 LVKDVRTNVETAAVDDVLDGNLEAFIEAYLR 363
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 86/139 (61%), Gaps = 4/139 (2%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L+KD+ S+R+ + + L L ++ +LE AA FW+ +AQETLQ L D K
Sbjct: 6 LKKDISIISERLGKTQDYLDLPNLNAQIRDLEQVAAQPEFWEAGEKAQETLQQLNDFKSL 65
Query: 67 INLLTDFKTKMDDAVTIVKLTE-EMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
+ +++ ++D IV+L E E+DS L EA +K L + LD++EL QLLSG Y
Sbjct: 66 WDTFHQWQSSLEDTKAIVELLEMELDSE---LFNEAQCNLKSLAQDLDKWELQQLLSGTY 122
Query: 126 DKEGAVISITAGAGGTDAQ 144
D++GA+++I AGAGGTDAQ
Sbjct: 123 DQKGAILTINAGAGGTDAQ 141
>gi|443311195|ref|ZP_21040827.1| peptide chain release factor 2 [Synechocystis sp. PCC 7509]
gi|442778725|gb|ELR88986.1| peptide chain release factor 2 [Synechocystis sp. PCC 7509]
Length = 361
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/151 (68%), Positives = 129/151 (85%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G E+MPL+ + S+ + IPE+DLEI+ +RAGGKGGQNVNKVETAVRI HIPTGV V
Sbjct: 204 QTSFAGVEIMPLI-DNSVHLDIPEKDLEITTTRAGGKGGQNVNKVETAVRIVHIPTGVAV 262
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KAL+ LKAKLL+IAEEQRA EI +IRGD V+A WG QIRNYVFHPY+
Sbjct: 263 RCTQERSQLQNKEKALAILKAKLLIIAEEQRAQEIAEIRGDIVEAAWGNQIRNYVFHPYQ 322
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT ET+ + VM+GE++ FI++YL+
Sbjct: 323 MVKDLRTNVETTAVTDVMNGEIDLFIQAYLR 353
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 75/115 (65%), Gaps = 2/115 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L ++ +LE A+ FW+N+ AQ+TLQ L +KD + ++ ++D +V+L E
Sbjct: 20 LNAKIQDLEQVASQPEFWENQEAAQKTLQELGSLKDHYSQYHQWQASLEDTKAVVELLEL 79
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D GLL EA + ++ L+K LD +EL QLLSG YD++GAV++I AGAGGTDAQ
Sbjct: 80 --ENDEGLLTEAQTNVRHLHKELDGWELQQLLSGTYDEKGAVLTINAGAGGTDAQ 132
>gi|352095544|ref|ZP_08956558.1| Peptide chain release factor 2 [Synechococcus sp. WH 8016]
gi|351678686|gb|EHA61831.1| Peptide chain release factor 2 [Synechococcus sp. WH 8016]
Length = 356
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 104/151 (68%), Positives = 128/151 (84%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP L EE +D+ IPE+DLE++ SR+GG GGQNVNKVETAVRI H+PTG+ V
Sbjct: 195 QTSFAGVEVMPKLDEE-VDLDIPEKDLEVTTSRSGGAGGQNVNKVETAVRILHVPTGLAV 253
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KA++ LKAKLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT ET+D+ VMDG+L PFI++ L+
Sbjct: 314 MVKDLRTQEETTDVQGVMDGDLNPFIQALLR 344
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 71/109 (65%), Gaps = 2/109 (1%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE AA FW+++ AQ+ ++ L +VK ++ L D++ +DD ++L E D
Sbjct: 17 DLEQLAAQPDFWNDQQNAQKQMRRLDEVKAQLQQLVDWRGAIDDGQATLELYEL--EPDE 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
LL EA + L +ALD++EL +LLSG YDKEGAV+SI AGAGGTDAQ
Sbjct: 75 DLLGEAQQGLNRLRQALDRWELERLLSGEYDKEGAVLSINAGAGGTDAQ 123
>gi|33866841|ref|NP_898400.1| peptide chain release factor 2 [Synechococcus sp. WH 8102]
gi|81573750|sp|Q7U3W6.1|RF2_SYNPX RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|33639442|emb|CAE08826.1| peptide chain release factor RF-2 [Synechococcus sp. WH 8102]
Length = 374
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 104/151 (68%), Positives = 128/151 (84%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP + EE +D+ IPE+DLE++ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 213 QTSFAGIEVMPKIDEE-VDIDIPEKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KA++ LKAKLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 272 RCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT ET+D+ +VMDG L+PFI + L+
Sbjct: 332 MVKDLRTSEETNDVQAVMDGALDPFIDASLR 362
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 2/142 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
D + ++D+ +DR+ + + L+ +LE AA FWD++ AQ+ ++ L +
Sbjct: 2 DLTDFKRDLSELTDRLGHAQDCLDVPALKARQQDLEQLAAQPDFWDDQQAAQKQMRRLDE 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
VK ++ L D+ +DDA ++L E D +L EA + +L + LD++EL +LLS
Sbjct: 62 VKAQLQQLADWGGAVDDAKATLELYEL--EPDEEMLTEAQEGLNQLRQGLDRWELERLLS 119
Query: 123 GPYDKEGAVISITAGAGGTDAQ 144
G YDKEGAV++I AGAGGTDAQ
Sbjct: 120 GDYDKEGAVLTINAGAGGTDAQ 141
>gi|116074014|ref|ZP_01471276.1| peptide chain release factor 2 [Synechococcus sp. RS9916]
gi|116069319|gb|EAU75071.1| peptide chain release factor 2 [Synechococcus sp. RS9916]
Length = 356
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 105/150 (70%), Positives = 127/150 (84%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP + EE + + IPE+DLEI+ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 195 QTSFAGVEVMPKI-EEDVQLDIPEKDLEITTSRSGGAGGQNVNKVETAVRILHIPTGLFV 253
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KA++ L AKLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD+RT HET+D+ VMDG+L+PFI+S L
Sbjct: 314 MVKDLRTQHETNDVQGVMDGDLDPFIQSLL 343
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 70/109 (64%), Gaps = 2/109 (1%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE AA FWD++ AQ+ ++ L +VK ++ L +K +DDA V+L D
Sbjct: 17 DLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLEQLNQWKRAVDDADATVELYAL--EPDD 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+L EA + + +L LD++EL +LLSG YDKEGAV+SI AGAGGTDAQ
Sbjct: 75 DMLGEAQTGLTQLRTELDRWELERLLSGEYDKEGAVLSINAGAGGTDAQ 123
>gi|87123562|ref|ZP_01079413.1| Peptide chain release factor 2 [Synechococcus sp. RS9917]
gi|86169282|gb|EAQ70538.1| Peptide chain release factor 2 [Synechococcus sp. RS9917]
Length = 356
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 103/151 (68%), Positives = 128/151 (84%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP L E+ +D+ IP++DLE++ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 195 QTSFAGVEVMPKL-EDEVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAV 253
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KA++ LKAKLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT ET+D+ VMDG L+PFI++ L+
Sbjct: 314 MVKDLRTQEETTDVQGVMDGHLDPFIQALLR 344
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 70/109 (64%), Gaps = 2/109 (1%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE A+ FWD++ AQ+ ++ L +VK ++ L ++ +DDA ++L + D
Sbjct: 17 DLEQLASQPDFWDDQPNAQKQMRRLDEVKAQLQQLEQWRGAIDDAQATLELYDL--EPDD 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+L EA + L ALD++EL +LLSG YDKEGAV+SI AGAGGTDAQ
Sbjct: 75 DMLSEAQEGLTTLRHALDRWELERLLSGEYDKEGAVLSINAGAGGTDAQ 123
>gi|254432093|ref|ZP_05045796.1| peptide chain release factor 2 [Cyanobium sp. PCC 7001]
gi|197626546|gb|EDY39105.1| peptide chain release factor 2 [Cyanobium sp. PCC 7001]
Length = 358
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/150 (70%), Positives = 127/150 (84%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP + EE + + IP++DLEI+ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 195 QTSFAGVEVMPKI-EEEVKLDIPDKDLEITTSRSGGAGGQNVNKVETAVRILHIPTGLFV 253
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KA++ L AKLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKD+RT HET+D+ VMDG+L+PFI+S L
Sbjct: 314 LVKDLRTQHETTDVQGVMDGDLDPFIQSLL 343
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 71/109 (65%), Gaps = 2/109 (1%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE A+ FWD++ AQ+ ++ L DVK ++ L +K + DA ++L E D
Sbjct: 17 DLEQLASQPDFWDDQQAAQKQMRQLDDVKAQLEQLERWKAAVSDAEATLELHEL--EPDG 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
LLEEA + + L LD++EL +LLSGPYDKEGAV++I AGAGGTDAQ
Sbjct: 75 DLLEEANAGLTSLRGDLDRWELERLLSGPYDKEGAVLTINAGAGGTDAQ 123
>gi|116072022|ref|ZP_01469290.1| peptide chain release factor 2 [Synechococcus sp. BL107]
gi|116065645|gb|EAU71403.1| peptide chain release factor 2 [Synechococcus sp. BL107]
Length = 356
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/151 (68%), Positives = 128/151 (84%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP L EE +D+ IP++DLE++ SR+GG GGQNVNKVETAVRI H+PTG+ V
Sbjct: 195 QTSFAGIEVMPKL-EEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAVRIQHLPTGLAV 253
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KA++ LKAKLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT ET+D+ +VMDG L+PFI + L+
Sbjct: 314 MVKDLRTQEETNDVQAVMDGALDPFIDASLR 344
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE AA FW+++ AQ+ ++ L +VK ++ L D+++ +DDA ++L E D
Sbjct: 17 DLEQLAAQPDFWNDQQNAQKQMRRLDEVKAQLKQLADWRSAIDDAKATLELYEL--EADE 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+L EA + EL + LD++EL +LLSG YDKEGAV+SI AGAGGTDAQ
Sbjct: 75 DMLGEAQQGLTELRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQ 123
>gi|414076417|ref|YP_006995735.1| peptide chain release factor 2 [Anabaena sp. 90]
gi|413969833|gb|AFW93922.1| peptide chain release factor 2 [Anabaena sp. 90]
Length = 315
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/151 (68%), Positives = 129/151 (85%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP + + ++ + IPE+DL+IS +R+GGKGGQNVNKVETAVRI H+PTG+ V
Sbjct: 158 QTSFAGIEVMPQI-DNTVKLDIPEKDLDISTTRSGGKGGQNVNKVETAVRIVHLPTGLAV 216
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQL NK KAL+RLKAKLL+IA+EQRA EI +IRGD V+A WG QIRNYVFHPY+
Sbjct: 217 RCTEERSQLQNKEKALARLKAKLLIIAKEQRAQEIAEIRGDMVEASWGNQIRNYVFHPYQ 276
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT ET+ I VM+GEL+ FI++YL+
Sbjct: 277 MVKDLRTNIETTAITDVMNGELDMFIQAYLR 307
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Query: 57 LQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFE 116
+Q L D+K ++ + +DD +V+L E TD LLEEA S I +LN LDQ+E
Sbjct: 1 MQELNDLKSHLDQYYKWHANLDDTRVVVELLEL--ETDTALLEEAESTISKLNHDLDQWE 58
Query: 117 LTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L QLLSG YD +GAV++I AGAGGTDAQ
Sbjct: 59 LQQLLSGTYDDKGAVLTINAGAGGTDAQ 86
>gi|78185691|ref|YP_378125.1| peptide chain release factor 2 [Synechococcus sp. CC9902]
gi|78169985|gb|ABB27082.1| bacterial peptide chain release factor 2 (bRF-2) [Synechococcus sp.
CC9902]
Length = 356
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/151 (68%), Positives = 128/151 (84%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP L EE +D+ IP++DLE++ SR+GG GGQNVNKVETAVRI H+PTG+ V
Sbjct: 195 QTSFAGIEVMPKL-EEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAVRIQHLPTGLAV 253
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KA++ LKAKLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT ET+D+ +VMDG L+PFI + L+
Sbjct: 314 MVKDLRTQEETNDVQAVMDGALDPFIDASLR 344
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE AA FW+++ AQ+ ++ L +VK ++ L D+++ +DDA ++L E D
Sbjct: 17 DLEQLAAQPDFWNDQQNAQKQMRRLDEVKAQLQQLADWRSAIDDAKATLELYEL--EADE 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+L EA + EL + LD++EL +LLSG YDKEGAV+SI AGAGGTDAQ
Sbjct: 75 EMLGEAQQGLTELRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQ 123
>gi|255074407|ref|XP_002500878.1| predicted protein [Micromonas sp. RCC299]
gi|226516141|gb|ACO62136.1| predicted protein [Micromonas sp. RCC299]
Length = 428
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/154 (66%), Positives = 127/154 (82%), Gaps = 1/154 (0%)
Query: 144 QTSFSGAEVMPLLPEESMD-VQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVT 202
QTSF+ EV P+L E S++ + + + DLEIS R+GG GGQNVNKVETAVRI H+PTG+T
Sbjct: 260 QTSFAAVEVTPVLDEGSVEELTLRDSDLEISTMRSGGAGGQNVNKVETAVRIKHVPTGIT 319
Query: 203 VRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPY 262
VRC EERSQ ANK K L+RLKAKL+ +AEEQRA+++ IRGDAV+AEWGQQIRNYVFHPY
Sbjct: 320 VRCEEERSQAANKAKGLARLKAKLVAVAEEQRAADVAAIRGDAVRAEWGQQIRNYVFHPY 379
Query: 263 KLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
K+VKDVRTG ETSD+ VM G+L+ F+ +L++K
Sbjct: 380 KMVKDVRTGKETSDVDGVMSGDLDEFMDEFLRWK 413
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 15/153 (9%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
LR+ A RV++ +++L +A+L+ A++ + WD+ +A+ + L D K++
Sbjct: 36 LRRRANALETRVKDALDVVDVERLAATVADLDAAASEGTLWDDPIKAKAVMAELADAKEQ 95
Query: 67 I-------NLLTDFKTKM--------DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKA 111
+ NLL D + DD+++ + D +L E + L +
Sbjct: 96 LATARGFENLLGDAAVALEMIDAEREDDSLSGAAANDASAGPDPTILAELSDACDNLERQ 155
Query: 112 LDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
LD++E+ +LL G YD A++++ AGAGGTDAQ
Sbjct: 156 LDKWEVRRLLGGKYDAMPALVNVYAGAGGTDAQ 188
>gi|113953765|ref|YP_731847.1| peptide chain release factor 2 [Synechococcus sp. CC9311]
gi|113881116|gb|ABI46074.1| peptide chain release factor 2, programmed frameshift
[Synechococcus sp. CC9311]
Length = 375
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/151 (68%), Positives = 128/151 (84%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP L EE +++ IPE+DLE++ SR+GG GGQNVNKVETAVRI H+PTG+ V
Sbjct: 214 QTSFAGVEVMPKLDEE-VELDIPEKDLEVTTSRSGGAGGQNVNKVETAVRILHVPTGLAV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KA++ LKAKLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 273 RCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT ET+D+ VMDG+L PFI++ L+
Sbjct: 333 MVKDLRTQEETTDVQGVMDGDLNPFIQALLR 363
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 87/144 (60%), Gaps = 2/144 (1%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M D + ++D+ +DR+ + + L + +LE AA FW+++ AQ+ ++ L
Sbjct: 1 MLDLTDFKRDLSELTDRLGHAQDCLDVPALNAKQQDLEQLAAQPDFWNDQQNAQKQMRRL 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+VK ++ L D++ +DD ++L E D LL EA + +L +ALD++EL +L
Sbjct: 61 DEVKAQLQQLVDWRGAIDDGQATLELHEL--EPDEDLLGEAQQGLNQLRQALDRWELERL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
LSG YDKEGAV+SI AGAGGTDAQ
Sbjct: 119 LSGEYDKEGAVLSINAGAGGTDAQ 142
>gi|443323118|ref|ZP_21052128.1| peptide chain release factor 2 [Gloeocapsa sp. PCC 73106]
gi|442787173|gb|ELR96896.1| peptide chain release factor 2 [Gloeocapsa sp. PCC 73106]
Length = 302
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/151 (66%), Positives = 129/151 (85%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP L ++++V+IPE+DLEI+ SR+GGKGGQNVNKVETAVR+ H+PTG+ V
Sbjct: 148 QTSFAGVEVMPALGLDAVNVEIPEKDLEITTSRSGGKGGQNVNKVETAVRVVHLPTGLAV 207
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KAL+ LKAKL++IA+EQRA I QIRGD V+A WG QIRNYVFHPY+
Sbjct: 208 RCTQERSQLQNKEKALTLLKAKLMIIAQEQRAQAIAQIRGDMVEAAWGNQIRNYVFHPYQ 267
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT ET+ + V+DGE++ FI++YL+
Sbjct: 268 MVKDLRTNVETTAVEDVLDGEIDQFIEAYLQ 298
>gi|440684132|ref|YP_007158927.1| Peptide chain release factor 2 [Anabaena cylindrica PCC 7122]
gi|428681251|gb|AFZ60017.1| Peptide chain release factor 2 [Anabaena cylindrica PCC 7122]
Length = 373
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/151 (67%), Positives = 129/151 (85%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP + + ++ + IPE+DLEI+ +R+GGKGGQNVNKVETAVRI H+PTG+ V
Sbjct: 213 QTSFAGVEVMPQI-DNTVKLDIPEKDLEITTTRSGGKGGQNVNKVETAVRIVHLPTGLAV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQL NK KAL+RLKAKLLVIA+EQRA EI +IRGD V+A WG QIRNYVFHPY+
Sbjct: 272 RCTEERSQLQNKEKALARLKAKLLVIAKEQRAQEIAEIRGDMVEASWGNQIRNYVFHPYQ 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT ET+ I +M+GE++ FI++YL+
Sbjct: 332 MVKDLRTNTETTAIGDIMNGEIDAFIQAYLR 362
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 92/142 (64%), Gaps = 2/142 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
D L++++E S R+ + + + L+ ++ +LE +A FWD++ +AQ+TLQ L D
Sbjct: 2 DVLELKREIETLSGRLGKTQDYLDVPALKAKIHDLEQISAQPEFWDDQTQAQQTLQELND 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+KD + + +DD +++L E TD LL+EA S I +LN+ LDQ+EL QLLS
Sbjct: 62 LKDHLEQYYQWHANLDDTRVVIELLEL--ETDESLLQEAESTITKLNRELDQWELQQLLS 119
Query: 123 GPYDKEGAVISITAGAGGTDAQ 144
GPYD +GAV++I AGAGGTDAQ
Sbjct: 120 GPYDIQGAVLTINAGAGGTDAQ 141
>gi|318040666|ref|ZP_07972622.1| peptide chain release factor 2 [Synechococcus sp. CB0101]
Length = 356
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/150 (69%), Positives = 127/150 (84%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP + EE + + IP++DLEI+ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 195 QTSFAGVEVMPKI-EEEVKLDIPDKDLEITTSRSGGAGGQNVNKVETAVRILHIPTGLFV 253
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KA++ L AKLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD+RT HET+D+ VMDG+L+PFI+S L
Sbjct: 314 MVKDLRTQHETTDVQGVMDGDLDPFIQSLL 343
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 71/109 (65%), Gaps = 2/109 (1%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE A+ FWD++ +AQ ++ L +VK ++ L+ ++ + DA V++ D
Sbjct: 17 DLEQLASQPDFWDDQKQAQAKMRQLDEVKAQLEQLSQWQGAVADAEATVEIYGL--EPDE 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
LL E+ +++L LD++EL +LLSGPYDKEGAVISI AGAGGTDAQ
Sbjct: 75 ELLSESNEALQKLRSDLDRWELERLLSGPYDKEGAVISINAGAGGTDAQ 123
>gi|428777383|ref|YP_007169170.1| peptide chain release factor 2 (bRF-2) [Halothece sp. PCC 7418]
gi|428691662|gb|AFZ44956.1| bacterial peptide chain release factor 2 (bRF-2) [Halothece sp. PCC
7418]
Length = 368
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/165 (61%), Positives = 136/165 (82%), Gaps = 1/165 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESM-DVQIPEEDLEISFSRAGGKGGQNVNKVE 189
++ I+ QTSF+G EVMP+L + ++ D+++PE+DLEI+ SRAGGKGGQNVNKVE
Sbjct: 200 LVRISPFNANGKRQTSFAGVEVMPMLDQTTIQDIELPEKDLEITTSRAGGKGGQNVNKVE 259
Query: 190 TAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAE 249
TAVRI HIPTG+ VRCT+ERSQL N+ KA++ LK+KL+VIA+EQRA +I +IRG+AV+A
Sbjct: 260 TAVRILHIPTGIAVRCTQERSQLQNREKAIALLKSKLIVIAQEQRAQKIAEIRGEAVEAA 319
Query: 250 WGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
WG QIRNYVFHPY++VKD+RT ETS + V+DGE++ FI++YL+
Sbjct: 320 WGNQIRNYVFHPYQMVKDLRTNVETSAVEDVLDGEIDAFIEAYLR 364
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 85/139 (61%), Gaps = 2/139 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L++DVE +R+ + + L ++ ++ +LE +AA FWD+ AQ+TLQ L D+K
Sbjct: 5 DLKRDVETVMERLGKAQEYLDLPWIQAKIEDLEQEAAQPEFWDDPDSAQQTLQKLNDLKS 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
+ ++ + +D I++L E D L EEA ++ L ++L+++EL QLL PY
Sbjct: 65 ALEQYHQWRDRAEDTQAIIELLE--TEADPALWEEATQNLEALQQSLERWELQQLLCEPY 122
Query: 126 DKEGAVISITAGAGGTDAQ 144
D+ GAV+++ GAGGTDAQ
Sbjct: 123 DERGAVLTLNTGAGGTDAQ 141
>gi|22298070|ref|NP_681317.1| peptide chain release factor 2 [Thermosynechococcus elongatus BP-1]
gi|22294248|dbj|BAC08079.1| peptide chain release factor 2 [Thermosynechococcus elongatus BP-1]
Length = 290
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 107/157 (68%), Positives = 131/157 (83%), Gaps = 1/157 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G +VMP L ++S+ V+IPE DLEI+ SR+GGKGGQNVNKVETAVRI H PTG+ V
Sbjct: 135 QTSFAGVDVMPEL-DQSVTVEIPESDLEITTSRSGGKGGQNVNKVETAVRIVHKPTGLAV 193
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KAL+ LKAKLLVIA+EQ+A EI IRG+AV+A WG QIRNYVFHPY+
Sbjct: 194 RCTQERSQLQNKEKALAILKAKLLVIAQEQKAKEIADIRGEAVEAAWGNQIRNYVFHPYQ 253
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 300
LVKD+RT ET+ I VMDG L+PFI++YL+ + + S
Sbjct: 254 LVKDLRTEVETTAIQDVMDGNLDPFIQAYLRQQTAAS 290
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 37/44 (84%)
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
A +++KEL+ L+++EL QLLSGPYDK A+++I AGAGGTDAQ
Sbjct: 20 ATTLLKELDTQLNRWELEQLLSGPYDKNNAIVTINAGAGGTDAQ 63
>gi|443316594|ref|ZP_21046032.1| peptide chain release factor 2 [Leptolyngbya sp. PCC 6406]
gi|442783787|gb|ELR93689.1| peptide chain release factor 2 [Leptolyngbya sp. PCC 6406]
Length = 364
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 131/157 (83%), Gaps = 1/157 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP+L + ++ + IP++DLEI SR+GG GGQNVNKVETAVRITH+PTG++V
Sbjct: 204 QTSFAGVEVMPIL-DRTVTLDIPDKDLEIKTSRSGGAGGQNVNKVETAVRITHLPTGISV 262
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL N+ KA++ L A+L+VIA+EQ+A I +IRGD V+A WG QIRNYVFHPY+
Sbjct: 263 RCTQERSQLQNREKAMALLTARLMVIAQEQKAQAIAEIRGDMVEAAWGNQIRNYVFHPYQ 322
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 300
+VKD+RT ET+ I +VMDGELEPFI++YL+ M+
Sbjct: 323 MVKDLRTNEETTAIDTVMDGELEPFIQAYLRQGTQMA 359
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 80/115 (69%), Gaps = 2/115 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E ++ +LE +AA WD+ +AQ +Q+L D K +++ + + +++DA +++L +E
Sbjct: 20 IEAQIHDLEQQAAQPELWDDPTQAQGIMQSLNDYKAQLSQIQQWWGQLEDAEAVLELLDE 79
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D LL EA + + +L++ALDQ+EL QLLSGPYDK GAV+SI AGAGGTDAQ
Sbjct: 80 --DADEALLAEAQTSLSDLDRALDQWELQQLLSGPYDKNGAVLSINAGAGGTDAQ 132
>gi|30692917|ref|NP_198466.2| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
gi|332006669|gb|AED94052.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
Length = 391
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 109/144 (75%), Positives = 125/144 (86%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY LRKDVE AS RVEEIRASA LQQLE+E+ LE KA D+SFWD+R +AQETL +L
Sbjct: 78 MQDFYTLRKDVEIASARVEEIRASANLQQLEQEITNLESKATDTSFWDDRTKAQETLSSL 137
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
D+KD++ LL++FKT ++DA TIVKLTEEMDSTD LLEEA IIKELNK+LD+FELTQL
Sbjct: 138 NDLKDRMRLLSEFKTMVEDAETIVKLTEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQL 197
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
LSGPYDKEGAV+ ITAGAGGTDAQ
Sbjct: 198 LSGPYDKEGAVVYITAGAGGTDAQ 221
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/64 (84%), Positives = 61/64 (95%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSFSG EVMPLLPEE++ ++IPEEDL+ISF+RAGGKGGQNVNKVETAVRITHIPTGV V
Sbjct: 293 QTSFSGVEVMPLLPEEAVGIEIPEEDLDISFTRAGGKGGQNVNKVETAVRITHIPTGVAV 352
Query: 204 RCTE 207
RCT+
Sbjct: 353 RCTD 356
>gi|158336840|ref|YP_001518014.1| peptide chain release factor 2 [Acaryochloris marina MBIC11017]
gi|158307081|gb|ABW28698.1| peptide chain release factor 2 [Acaryochloris marina MBIC11017]
Length = 304
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 104/151 (68%), Positives = 127/151 (84%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP L E +++ IP+ DLEI+ SR+GGKGGQNVNKVETAVRI H+PTG+ V
Sbjct: 148 QTSFAGIEVMPQLDHE-VELDIPDTDLEITTSRSGGKGGQNVNKVETAVRIVHVPTGLAV 206
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KA++ LKAKLLVIA+EQ+A EI IRGDAV+A WG QIRNYVFHPY+
Sbjct: 207 RCTQERSQLQNKEKAMALLKAKLLVIAQEQKAKEIADIRGDAVEAAWGNQIRNYVFHPYQ 266
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT ET+ I SVMDG L+ FI++YL+
Sbjct: 267 MVKDLRTNQETTAIESVMDGALDNFIEAYLR 297
>gi|359460154|ref|ZP_09248717.1| peptide chain release factor 2 [Acaryochloris sp. CCMEE 5410]
Length = 304
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 104/151 (68%), Positives = 127/151 (84%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP L E +++ IP+ DLEI+ SR+GGKGGQNVNKVETAVRI H+PTG+ V
Sbjct: 148 QTSFAGIEVMPQLDHE-VELDIPDTDLEITTSRSGGKGGQNVNKVETAVRIVHVPTGLAV 206
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KA++ LKAKLLVIA+EQ+A EI IRGDAV+A WG QIRNYVFHPY+
Sbjct: 207 RCTQERSQLQNKEKAMALLKAKLLVIAQEQKAKEIADIRGDAVEAAWGNQIRNYVFHPYQ 266
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT ET+ I SVMDG L+ FI++YL+
Sbjct: 267 MVKDLRTNQETTAIESVMDGALDNFIEAYLR 297
>gi|354552620|ref|ZP_08971928.1| Peptide chain release factor 2 [Cyanothece sp. ATCC 51472]
gi|353555942|gb|EHC25330.1| Peptide chain release factor 2 [Cyanothece sp. ATCC 51472]
Length = 370
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 110/158 (69%), Positives = 132/158 (83%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP L E+ + V+IP++DLEIS SR+GGKGGQNVNKVETAVR+ HIPTG+ V
Sbjct: 213 QTSFAGVEVMPALEEDDLKVEIPDKDLEISTSRSGGKGGQNVNKVETAVRVVHIPTGIAV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KAL+ LKAKLL+IA+EQRA EI +IRGD V A WG QIRNYVFHPY+
Sbjct: 273 RCTQERSQLQNKEKALALLKAKLLIIAQEQRAQEIAEIRGDMVDAAWGNQIRNYVFHPYQ 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSL 301
+VKD+RT ET+DI VMDG L+PFI++YL+Y S L
Sbjct: 333 MVKDLRTNIETTDITGVMDGYLDPFIEAYLRYDTSSDL 370
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 81/138 (58%), Gaps = 2/138 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L++++E R+ + + L L+ + LE AA FWD+ AQ TLQ L D+K +
Sbjct: 6 LKREIELIGSRLGKTQDYLDLPALKAAIKNLENTAAQPQFWDDPETAQTTLQELNDLKSQ 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + +++D I +L E D D L +EA I +LN LD++EL QLLSG YD
Sbjct: 66 LEQYQRWCHQLEDTKAIAELLELED--DTTLRQEAQENITQLNHNLDRWELQQLLSGIYD 123
Query: 127 KEGAVISITAGAGGTDAQ 144
+GA+++I AGAGGTDAQ
Sbjct: 124 TKGAILTINAGAGGTDAQ 141
>gi|172039100|ref|YP_001805601.1| peptide chain release factor 2 [Cyanothece sp. ATCC 51142]
gi|171700554|gb|ACB53535.1| peptide chain release factor 2 [Cyanothece sp. ATCC 51142]
Length = 358
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 110/158 (69%), Positives = 132/158 (83%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP L E+ + V+IP++DLEIS SR+GGKGGQNVNKVETAVR+ HIPTG+ V
Sbjct: 201 QTSFAGVEVMPALEEDDLKVEIPDKDLEISTSRSGGKGGQNVNKVETAVRVVHIPTGIAV 260
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KAL+ LKAKLL+IA+EQRA EI +IRGD V A WG QIRNYVFHPY+
Sbjct: 261 RCTQERSQLQNKEKALALLKAKLLIIAQEQRAQEIAEIRGDMVDAAWGNQIRNYVFHPYQ 320
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSL 301
+VKD+RT ET+DI VMDG L+PFI++YL+Y S L
Sbjct: 321 MVKDLRTNIETTDITGVMDGYLDPFIEAYLRYDTSSDL 358
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 73/123 (59%), Gaps = 2/123 (1%)
Query: 22 RASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAV 81
R + L L+ + LE AA FWD+ AQ TLQ L D+K ++ + +++D
Sbjct: 9 RTTFDLPALKAAIKNLENTAAQPQFWDDPETAQTTLQELNDLKSQLEQYQRWCHQLEDTK 68
Query: 82 TIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGT 141
I +L E D D L +EA I +LN LD++EL QLLSG YD +GA+++I AGAGGT
Sbjct: 69 AIAELLELED--DTTLRQEAQENITQLNHNLDRWELQQLLSGIYDTKGAILTINAGAGGT 126
Query: 142 DAQ 144
DAQ
Sbjct: 127 DAQ 129
>gi|220910508|ref|YP_002485819.1| peptide chain release factor 2 [Cyanothece sp. PCC 7425]
gi|219867119|gb|ACL47458.1| peptide chain release factor 2 [Cyanothece sp. PCC 7425]
Length = 361
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 182/279 (65%), Gaps = 21/279 (7%)
Query: 23 ASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLLTDFKTKMDD 79
AS L+QL+++L++ E++ S +D R A T+ A TD +D +L T+ +
Sbjct: 89 ASDNLKQLDQQLSQWELEQLLSGTYD-RNGAVLTINAGAGGTDAQDWAEMLLRMYTRWAE 147
Query: 80 AVTI-VKLTEEMDSTDAGLLEEAASIIKELNKALD-QFELTQLLSGPYDKEGA--VISIT 135
V L E + +AG IK +D ++ L S ++G ++ I+
Sbjct: 148 QHGYKVHLAELSEGDEAG--------IKSATLEIDGRYAYGYLRS----EKGTHRLVRIS 195
Query: 136 AGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRIT 195
QTSF+G EVMP L + S+ ++IP++DLEI+ SR+GGKGGQNVNKVETAVRI
Sbjct: 196 PFNANGKRQTSFAGVEVMPQL-DHSVQLEIPDKDLEITTSRSGGKGGQNVNKVETAVRIV 254
Query: 196 HIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIR 255
H+PTG+ VRCT+ERSQL NK KAL+ LKAKLL+IA+EQ+A EI IRGDAV+A WG QIR
Sbjct: 255 HLPTGLAVRCTQERSQLQNKEKALAILKAKLLIIAQEQKAQEIADIRGDAVEAAWGTQIR 314
Query: 256 NYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
NYVF PYKLVKDVRTG ET I VM+GEL+ FI++YL+
Sbjct: 315 NYVFDPYKLVKDVRTGVETQAIEVVMNGELDEFIQAYLR 353
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 79/115 (68%), Gaps = 2/115 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L+ ++++LE AA +FWD++A AQ TLQ L ++K + L ++ + DAV ++L E
Sbjct: 20 LQAKISDLEQVAAQPNFWDDQATAQVTLQELNELKSHLEQLHRWQATLSDAVAALELVEL 79
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D LL+EA+ +K+L++ L Q+EL QLLSG YD+ GAV++I AGAGGTDAQ
Sbjct: 80 --EPDESLLQEASDNLKQLDQQLSQWELEQLLSGTYDRNGAVLTINAGAGGTDAQ 132
>gi|159902739|ref|YP_001550083.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
9211]
gi|159887915|gb|ABX08129.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
9211]
Length = 356
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 99/150 (66%), Positives = 129/150 (86%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G E+MP L EE +++ IPE+DLEI+ SR+GG GGQNVNKVETAVRI H+P+G+ V
Sbjct: 195 QTSFAGVEIMPKL-EEEVELDIPEKDLEITTSRSGGAGGQNVNKVETAVRIVHLPSGLAV 253
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KA++ LKAKL++IA+EQRAS+I IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLKAKLMIIAQEQRASQIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD+RTG E++D+ VM+G+L+PFI++ L
Sbjct: 314 MVKDLRTGKESTDVEGVMNGDLDPFIQALL 343
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE A+ FW+++ +A++ ++ L +VK ++ L D+ ++DA ++L E D
Sbjct: 17 DLEQIASQPEFWNDQQKAKKEMRRLDEVKAQLKKLVDWDAAIEDAQVSLELYEL--EPDD 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+L EA + L LD +EL +LLSG YDKEG V+SI AGAGGTDAQ
Sbjct: 75 EMLAEAIKGLDNLKSDLDLWELERLLSGQYDKEGVVLSINAGAGGTDAQ 123
>gi|87300848|ref|ZP_01083690.1| peptide chain release factor 2 [Synechococcus sp. WH 5701]
gi|87284719|gb|EAQ76671.1| peptide chain release factor 2 [Synechococcus sp. WH 5701]
Length = 355
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 102/151 (67%), Positives = 127/151 (84%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP L EE + + IP++DLE++ SR+GG GGQNVNKVETAVRI H+PTG+ V
Sbjct: 195 QTSFAGVEVMPKL-EEDVKLDIPDKDLEVTTSRSGGAGGQNVNKVETAVRILHVPTGLAV 253
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KA++ L AKLLVIA+EQRASEI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLMAKLLVIAQEQRASEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT ET+D+ VMDG+L+PFI++ L+
Sbjct: 314 MVKDLRTAVETTDVQGVMDGDLDPFIQALLR 344
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 74/109 (67%), Gaps = 2/109 (1%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE A+ FWD++ +AQ+ ++ L +VK ++ L ++T +DDA ++L + D
Sbjct: 17 DLEQLASQPDFWDDQQQAQKQMRQLDEVKAQLEQLQQWRTAVDDARATLELYDL--EPDE 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
LL EA ++ L ALD++EL +LLSGPYDKEGAVISI AGAGGTDAQ
Sbjct: 75 ELLSEANGGLQSLKAALDRWELERLLSGPYDKEGAVISINAGAGGTDAQ 123
>gi|72383384|ref|YP_292739.1| peptide chain release factor 2 [Prochlorococcus marinus str.
NATL2A]
gi|72003234|gb|AAZ59036.1| bacterial peptide chain release factor 2 (bRF-2) [Prochlorococcus
marinus str. NATL2A]
Length = 313
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 132/296 (44%), Positives = 187/296 (63%), Gaps = 21/296 (7%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL-- 60
+ Y L D E S+ A GL+QL++EL E + S +D A ++ A
Sbjct: 29 ELYELDPDEEILSE------AHNGLEQLKQELERWETERLLSGIYDKEG-AVLSINAGAG 81
Query: 61 -TDVKDKINLLTDFKTKMDDAVTI-VKLTEEMDSTDAGLLEEAASIIKELNKALDQFELT 118
TD +D +L T+ + + V + E + +AG+ S+ E+ + + +
Sbjct: 82 GTDAQDWAQMLLRMYTRWAENNGMKVSINELSEGEEAGI----KSVTIEI-EGVYAYGFL 136
Query: 119 QLLSGPYDKEGAVISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAG 178
Q G + ++ I+ QTSF+G EVMP L EE ++++IPE+DLEI+ SR+G
Sbjct: 137 QNEKGTH----RLVRISPFNANGKRQTSFAGVEVMPKLDEE-VELEIPEKDLEITTSRSG 191
Query: 179 GKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 238
G GGQNVNKVETAVRI H+PTG+ VRCT+ERSQL NK KA++ LK+KL+VIA EQRA+EI
Sbjct: 192 GAGGQNVNKVETAVRILHVPTGIAVRCTQERSQLQNKDKAMALLKSKLMVIAVEQRAAEI 251
Query: 239 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
IRGD V+A WG QIRNYVFHPY++VKD+RT ET+D+ SVM+G+++ FI+S L+
Sbjct: 252 ADIRGDIVEAAWGNQIRNYVFHPYQMVKDLRTEQETTDVDSVMNGKIDIFIQSLLR 307
>gi|334118073|ref|ZP_08492163.1| peptide chain release factor 2 [Microcoleus vaginatus FGP-2]
gi|333460058|gb|EGK88668.1| peptide chain release factor 2 [Microcoleus vaginatus FGP-2]
Length = 377
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 136/276 (49%), Positives = 182/276 (65%), Gaps = 15/276 (5%)
Query: 23 ASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLLTDFKTKMDD 79
AS+ L QL +EL + E++ S +D A T+ A TD +D +L T+ +
Sbjct: 98 ASSSLSQLTRELDQWELQQLLSGPYDEGG-AVLTINAGAGGTDAQDWAEMLLRMYTRWGE 156
Query: 80 AVTI-VKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGA 138
+ V L E + +AG+ + I+ + E G + ++ I+
Sbjct: 157 SQGYKVHLMEISEGEEAGVKSASLEIVGRYAYGYMRSE-----KGTH----RLVRISPFN 207
Query: 139 GGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 198
QTSF+G EVMP+L + S+ + IPE+DLE++ SRAGGKGGQNVNKVETAVRI H+P
Sbjct: 208 ANDKRQTSFAGVEVMPIL-DRSVQLDIPEKDLEVTTSRAGGKGGQNVNKVETAVRIVHLP 266
Query: 199 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 258
TG+ VRCTEERSQL NK KAL+ LKA+LLVIA+EQRASEI +IRGD V+A WGQQIRNYV
Sbjct: 267 TGLAVRCTEERSQLQNKEKALALLKARLLVIAKEQRASEIAEIRGDMVEAAWGQQIRNYV 326
Query: 259 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
FHPY++VKD+RTG ET+ I VM+GEL+PFI++YL+
Sbjct: 327 FHPYQMVKDLRTGVETTAIADVMNGELDPFIQAYLR 362
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 91/139 (65%), Gaps = 2/139 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+++ ++E SDR+ + + L ++ +LE A +FWD++ AQETLQ L D+K
Sbjct: 5 DIKHNIETLSDRLGTTQDYLDIPALTAKIQDLEQICAQPAFWDDQDRAQETLQELNDLKS 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
+ ++++T ++DA I++L E D L +EA+S + +L + LDQ+EL QLLSGPY
Sbjct: 65 HLEQYSNWQTSLEDAKAILELLEL--EADESLFQEASSSLSQLTRELDQWELQQLLSGPY 122
Query: 126 DKEGAVISITAGAGGTDAQ 144
D+ GAV++I AGAGGTDAQ
Sbjct: 123 DEGGAVLTINAGAGGTDAQ 141
>gi|124024969|ref|YP_001014085.1| peptide chain release factor 2 [Prochlorococcus marinus str.
NATL1A]
gi|123960037|gb|ABM74820.1| peptide chain release factor RF-2 [Prochlorococcus marinus str.
NATL1A]
Length = 313
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 133/296 (44%), Positives = 187/296 (63%), Gaps = 21/296 (7%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL-- 60
+ Y L D E S+ A GL++L++EL E + S +D A ++ A
Sbjct: 29 ELYELDLDEEILSE------AHNGLEKLKQELDRWETERLLSGIYDKEG-AVLSINAGAG 81
Query: 61 -TDVKDKINLLTDFKTKMDDAVTI-VKLTEEMDSTDAGLLEEAASIIKELNKALDQFELT 118
TD +D +L T+ D + V + E + +AG+ S+ E+ + + +
Sbjct: 82 GTDAQDWAQMLLRMYTRWADNNGMKVIINELSEGEEAGI----KSVTIEI-EGVYAYGFL 136
Query: 119 QLLSGPYDKEGAVISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAG 178
Q G + ++ I+ QTSF+G EVMP L EE ++++IPE+DLEI+ SR+G
Sbjct: 137 QNEKGTH----RLVRISPFNANGKRQTSFAGVEVMPKLDEE-VELEIPEKDLEITTSRSG 191
Query: 179 GKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 238
G GGQNVNKVETAVRI H+PTG+ VRCT+ERSQL NK KA++ LK+KL+VIA EQRA+EI
Sbjct: 192 GAGGQNVNKVETAVRILHVPTGIAVRCTQERSQLQNKDKAMALLKSKLMVIALEQRAAEI 251
Query: 239 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
IRGD V+A WG QIRNYVFHPY++VKD+RT ET+D+ SVM+GE++ FI+S L+
Sbjct: 252 ADIRGDIVEAAWGNQIRNYVFHPYQMVKDLRTEQETTDVDSVMNGEIDIFIQSLLR 307
>gi|33239657|ref|NP_874599.1| peptide chain release factor 2 [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33237182|gb|AAP99251.1| Protein chain release factor B [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 356
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/150 (67%), Positives = 129/150 (86%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP L EE + ++IPE+DLE++ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 195 QTSFAGIEVMPQL-EEDVHLEIPEKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAV 253
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KA++ LKAKL++IA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLKAKLMIIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD+R+G E++D+ SVM+G+L+ FI+S L
Sbjct: 314 MVKDLRSGTESNDVESVMNGDLDLFIQSLL 343
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 73/109 (66%), Gaps = 2/109 (1%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE AA FW+++ +A++ ++ L +VKD++ L ++ ++DA ++L E D
Sbjct: 17 DLEQIAAQPDFWNDQQKARKQMRQLDEVKDQLTKLANWNAAIEDAKVSLELYEL--EPDN 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
++EEA + +L LD +EL +LLSGPYDKEGAV++I AGAGGTDAQ
Sbjct: 75 EMIEEAQIGLCQLKTELDLWELERLLSGPYDKEGAVLAINAGAGGTDAQ 123
>gi|434389323|ref|YP_007099934.1| peptide chain release factor 2 [Chamaesiphon minutus PCC 6605]
gi|428020313|gb|AFY96407.1| peptide chain release factor 2 [Chamaesiphon minutus PCC 6605]
Length = 371
Score = 216 bits (551), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 102/156 (65%), Positives = 128/156 (82%), Gaps = 1/156 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMPL+ + S+ + IP+ DLEI+ +RAGGKGGQNVNKVETAVRI H PTGV V
Sbjct: 214 QTSFAGVEVMPLI-DNSVQLDIPDTDLEITTTRAGGKGGQNVNKVETAVRIVHKPTGVAV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KAL LKAKLL+IA+EQ+ EI +IRGD V+A WGQQIRNYVFHPY+
Sbjct: 273 RCTQERSQLQNKEKALVILKAKLLIIAQEQKTKEIAEIRGDMVEAAWGQQIRNYVFHPYQ 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSM 299
+VKD+RT ET+ + VM+GE++ FI++YL+ + M
Sbjct: 333 MVKDLRTSVETTAVGDVMNGEIDEFIEAYLRQENMM 368
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 85/144 (59%), Gaps = 2/144 (1%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M D ++++D+ SDR+ + + + L ++ +LE AA FWDN+ AQ +Q L
Sbjct: 1 MIDLVDIKRDINTLSDRLGKTQQYLDIPALTAKIQDLEQVAAQPEFWDNQNVAQAAMQEL 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
D K + +++ + DA T ++L E D L +EA + +++ LD++EL QL
Sbjct: 61 NDYKSHLEQFQHWQSSVADAQTALELLEL--EPDEALYQEAKQNLSQMSLELDRWELEQL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
LSG YD +GA+++I AGAGGTDAQ
Sbjct: 119 LSGTYDAKGAILTINAGAGGTDAQ 142
>gi|218439666|ref|YP_002377995.1| peptide chain release factor 2 [Cyanothece sp. PCC 7424]
gi|218172394|gb|ACK71127.1| peptide chain release factor 2 [Cyanothece sp. PCC 7424]
Length = 360
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/151 (71%), Positives = 132/151 (87%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G E+MP + EE+++V+IPE+DLEI+ SRAGGKGGQNVNKVETAVR+ H+PTG+ V
Sbjct: 204 QTSFAGVEIMPNIEEEALNVEIPEKDLEITTSRAGGKGGQNVNKVETAVRVVHLPTGIAV 263
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCTEERSQL NK KAL+ LKAKLLVIA EQRA EI +IRGD V+A WG QIRNYVFHPY+
Sbjct: 264 RCTEERSQLQNKEKALALLKAKLLVIAVEQRAQEIAEIRGDMVEAAWGNQIRNYVFHPYQ 323
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT ETSDI +VMDG+L+ FI++YL+
Sbjct: 324 MVKDLRTNVETSDIGAVMDGDLDAFIEAYLR 354
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 80/118 (67%), Gaps = 2/118 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L L+ ++ +LE +AA FWD+ AQ TLQ L ++K + L ++T+++DA I +L
Sbjct: 17 LPALKAKIKDLEQRAAQPEFWDSPETAQSTLQELNELKSSLELYQQWQTQLEDAKAISEL 76
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E + D LL+EA + +++LN L+++EL QLLSGPYD +G +++I AGAGGTDAQ
Sbjct: 77 LELEE--DTSLLQEAQTNLQQLNHELERWELQQLLSGPYDAKGVLLTINAGAGGTDAQ 132
>gi|126657098|ref|ZP_01728269.1| peptide chain release factor 2 [Cyanothece sp. CCY0110]
gi|126621641|gb|EAZ92351.1| peptide chain release factor 2 [Cyanothece sp. CCY0110]
Length = 358
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/152 (69%), Positives = 130/152 (85%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP+L E+ + V IP++DL+IS SR+GGKGGQNVNKVETAVRI H+PTG+ V
Sbjct: 201 QTSFAGVEVMPMLEEDDLKVDIPDKDLDISTSRSGGKGGQNVNKVETAVRIVHVPTGIAV 260
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KAL+ LKAKLL+IA+EQRA EI +IRGD V+A WG QIRNYVFHPY+
Sbjct: 261 RCTQERSQLQNKEKALALLKAKLLIIAQEQRAQEIAEIRGDMVEAAWGNQIRNYVFHPYQ 320
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
+VKD+RT ET+D+ VMDG L+ FI++YL+Y
Sbjct: 321 MVKDLRTNVETTDVTGVMDGNLDSFIEAYLRY 352
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L L+ + LE AA FWD AQ+TLQ L D+K ++ + +++D I +L
Sbjct: 14 LPALKANIKNLENTAAQPQFWDEPETAQKTLQKLNDLKSQLEQYQQWCEQLEDTEAIAEL 73
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E D D L EA I +LN LD++EL QLLSG YD +GAV++I AGAGGTDAQ
Sbjct: 74 LELED--DTTLRREAQENITQLNHNLDRWELQQLLSGIYDTKGAVLTINAGAGGTDAQ 129
>gi|260436566|ref|ZP_05790536.1| peptide chain release factor 2 [Synechococcus sp. WH 8109]
gi|260414440|gb|EEX07736.1| peptide chain release factor 2 [Synechococcus sp. WH 8109]
Length = 356
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/151 (67%), Positives = 125/151 (82%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP + EE + + IPE+DLEI+ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 195 QTSFAGVEVMPKI-EEDVKLDIPEKDLEITTSRSGGAGGQNVNKVETAVRILHIPTGLFV 253
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KA++ L AKLLVIA+EQRA+EI IRGD V+A WG QIRNYVF PY+
Sbjct: 254 RCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFQPYQ 313
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT ET+D+ +VMDG L+PFI + L+
Sbjct: 314 MVKDLRTNEETNDVQAVMDGALDPFIDACLR 344
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 76/109 (69%), Gaps = 2/109 (1%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE AA FWD++ AQ+ ++ L +VK +++ L ++ +DDA ++L E +D D
Sbjct: 17 DLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLSQLAGWRGAVDDAQATLELYE-LDP-DE 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
LL+EA + + +L + LD++EL +LLSG YDKEGAV+SI AGAGGTDAQ
Sbjct: 75 DLLQEAQNGLNQLRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQ 123
>gi|194476812|ref|YP_002048991.1| peptide chain release factor 2 [Paulinella chromatophora]
gi|171191819|gb|ACB42781.1| peptide chain release factor 2 [Paulinella chromatophora]
Length = 354
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/151 (66%), Positives = 128/151 (84%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP L E+ +D+ IP++DLE++ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 195 QTSFAGVEVMPKLNED-IDMFIPDKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAV 253
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KA++ LKAKL+VIA+EQRA+EI IRG+ V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLKAKLMVIAQEQRAAEIADIRGEIVEAAWGNQIRNYVFHPYQ 313
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT ET+D+ VMDG+L+ FI++ L+
Sbjct: 314 MVKDLRTNKETTDVQGVMDGDLDLFIQALLR 344
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 67/109 (61%), Gaps = 2/109 (1%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE A+ FWD + +AQ+ ++ L +V++++ L ++ + DA ++L D
Sbjct: 17 DLEQLASQPKFWDLQDQAQKQMRQLDEVREQLEKLRQWQGTIADAKATLELYN--IEPDE 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+L E ++ L LD++EL +LL+G YDK GAVISI AGAGGTDAQ
Sbjct: 75 SMLNEGNEGMQRLKNNLDRWELERLLNGTYDKGGAVISINAGAGGTDAQ 123
>gi|257060501|ref|YP_003138389.1| hypothetical protein Cyan8802_2694 [Cyanothece sp. PCC 8802]
gi|256590667|gb|ACV01554.1| hypothetical protein Cyan8802_2694 [Cyanothece sp. PCC 8802]
Length = 375
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/276 (48%), Positives = 179/276 (64%), Gaps = 14/276 (5%)
Query: 23 ASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLLTDFKTKMDD 79
A A L QL EL E++ S +D++ A T+ A TD +D +L T+ +
Sbjct: 108 AEANLTQLNHELDRWELQRLLSGIYDSKG-AVLTINAGAGGTDAQDWAEMLLRMYTRWGE 166
Query: 80 AVTI-VKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGA 138
V LTE + +AG+ ++A++ E A L G ++ I+
Sbjct: 167 QQGYKVHLTEISEGDEAGI--KSATLEIEGRYAYG------YLKGEKGTH-RLVRISPFN 217
Query: 139 GGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 198
QTSF+G EVMP L EE + V+IPE+DLEI+ +R+GGKGGQNVNKVETAVR+ H+P
Sbjct: 218 ANGKRQTSFAGIEVMPALEEEDLKVEIPEKDLEITTTRSGGKGGQNVNKVETAVRVVHLP 277
Query: 199 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 258
TG+ VRCT+ERSQL NK KAL+ LKAKLL+IA+EQRA I +IRGD V+A WG QIRNYV
Sbjct: 278 TGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQAIAEIRGDMVEAAWGNQIRNYV 337
Query: 259 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
FHPY++VKDVRT ET+D+ VMDG+L+ FI+SYL+
Sbjct: 338 FHPYQMVKDVRTNTETTDVNGVMDGKLDLFIESYLR 373
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 85/138 (61%), Gaps = 2/138 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L+++++ + R+ + + L L + +LE AA FWDN+ AQ+TLQ L D+K
Sbjct: 16 LKREIQQIAARLGKTQDYLDLPALNANIQDLEQIAAQPDFWDNQETAQKTLQQLNDLKSS 75
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + +++D I +L E + DA L EEA + + +LN LD++EL +LLSG YD
Sbjct: 76 VEEYHQWMGQLEDLKAIAELLELEE--DATLNEEAEANLTQLNHELDRWELQRLLSGIYD 133
Query: 127 KEGAVISITAGAGGTDAQ 144
+GAV++I AGAGGTDAQ
Sbjct: 134 SKGAVLTINAGAGGTDAQ 151
>gi|157412537|ref|YP_001483403.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
9215]
gi|157387112|gb|ABV49817.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
9215]
Length = 354
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/168 (60%), Positives = 132/168 (78%), Gaps = 1/168 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ QTSF+G EVMP L ++++ + IPE+DLEI+ SR+GG GGQNVNKVET
Sbjct: 182 LVRISPFNANGKRQTSFAGVEVMPKL-DDNISLDIPEKDLEITTSRSGGAGGQNVNKVET 240
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRI H+P+G++VRCT+ERSQL NK KA+ LK+KLLVIA+EQRA+E+ I+GD V+A W
Sbjct: 241 AVRIVHLPSGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEVADIKGDIVEAAW 300
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
G QIRNYVFHPY++VKD+RT ET+D+ SV+DG LEPFI L+ S
Sbjct: 301 GNQIRNYVFHPYQMVKDLRTMQETNDLDSVLDGGLEPFIHELLRMNIS 348
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 79/124 (63%), Gaps = 2/124 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
+R + +L+ + ELE +A +FW+N+ EA++ + L DVK ++ LL +KT + DA
Sbjct: 2 LRIVFDVPRLKAKRRELEQISAQPAFWENQEEAKKQMLILDDVKAQLELLDKWKTFISDA 61
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
++L ++ + +LE + K+L + LD++E +LL G YDKEGAV+SI AGAGG
Sbjct: 62 NASLELYS-LEPEEEMILESKQGL-KKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGG 119
Query: 141 TDAQ 144
TDAQ
Sbjct: 120 TDAQ 123
>gi|218248175|ref|YP_002373546.1| hypothetical protein PCC8801_3422 [Cyanothece sp. PCC 8801]
gi|226739124|sp|B7K0A6.1|RF2_CYAP8 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|218168653|gb|ACK67390.1| hypothetical protein PCC8801_3422 [Cyanothece sp. PCC 8801]
Length = 365
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/276 (48%), Positives = 179/276 (64%), Gaps = 14/276 (5%)
Query: 23 ASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLLTDFKTKMDD 79
A A L QL EL E++ S +D++ A T+ A TD +D +L T+ +
Sbjct: 98 AEANLTQLNHELDRWELQRLLSGIYDSKG-AVLTINAGAGGTDAQDWAEMLLRMYTRWGE 156
Query: 80 AVTI-VKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGA 138
V LTE + +AG+ ++A++ E A L G ++ I+
Sbjct: 157 QQGYKVHLTEISEGDEAGI--KSATLEIEGRYAYG------YLKGEKGTH-RLVRISPFN 207
Query: 139 GGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 198
QTSF+G EVMP L EE + V+IPE+DLEI+ +R+GGKGGQNVNKVETAVR+ H+P
Sbjct: 208 ANGKRQTSFAGIEVMPALEEEDLKVEIPEKDLEITTTRSGGKGGQNVNKVETAVRVVHLP 267
Query: 199 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 258
TG+ VRCT+ERSQL NK KAL+ LKAKLL+IA+EQRA I +IRGD V+A WG QIRNYV
Sbjct: 268 TGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQAIAEIRGDMVEAAWGNQIRNYV 327
Query: 259 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
FHPY++VKDVRT ET+D+ VMDG+L+ FI+SYL+
Sbjct: 328 FHPYQMVKDVRTNTETTDVNGVMDGKLDLFIESYLR 363
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 85/138 (61%), Gaps = 2/138 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L+++++ + R+ + + L L + +LE AA FWDN+ AQ+TLQ L D+K
Sbjct: 6 LKREIQQIAARLGKTQDYLDLPALNANIQDLEQIAAQPDFWDNQETAQKTLQQLNDLKSS 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + +++D I +L E + DA L EEA + + +LN LD++EL +LLSG YD
Sbjct: 66 VEEYHQWMGQLEDLKAIAELLELEE--DATLNEEAEANLTQLNHELDRWELQRLLSGIYD 123
Query: 127 KEGAVISITAGAGGTDAQ 144
+GAV++I AGAGGTDAQ
Sbjct: 124 SKGAVLTINAGAGGTDAQ 141
>gi|78213950|ref|YP_382729.1| peptide chain release factor 2 [Synechococcus sp. CC9605]
gi|78198409|gb|ABB36174.1| peptide chain release factor 2 [Synechococcus sp. CC9605]
Length = 356
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/151 (67%), Positives = 125/151 (82%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP + EE + + IPE+DLEI+ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 195 QTSFAGVEVMPKI-EEEVKLDIPEKDLEITTSRSGGAGGQNVNKVETAVRILHIPTGLFV 253
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KA++ L AKLLVIA+EQRA+EI IRGD V+A WG QIRNYVF PY+
Sbjct: 254 RCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFQPYQ 313
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT ET+D+ +VMDG L+PFI + L+
Sbjct: 314 MVKDLRTNEETNDVQAVMDGALDPFIDASLR 344
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 74/109 (67%), Gaps = 2/109 (1%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE AA FWD++ AQ+ ++ L +VK +++ L ++ +DDA ++L E D
Sbjct: 17 DLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLSQLGGWRGAVDDAQATLELYEL--EPDE 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
LL+EA + + +L + LD++EL +LLSG YDKEGAV+SI AGAGGTDAQ
Sbjct: 75 DLLQEAQNGLNQLRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQ 123
>gi|254526132|ref|ZP_05138184.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
9202]
gi|221537556|gb|EEE40009.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
9202]
Length = 354
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/168 (60%), Positives = 132/168 (78%), Gaps = 1/168 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ QTSF+G EVMP L ++++ + IPE+DLEI+ SR+GG GGQNVNKVET
Sbjct: 182 LVRISPFNANGKRQTSFAGVEVMPKL-DDNISLDIPEKDLEITTSRSGGAGGQNVNKVET 240
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRI H+P+G++VRCT+ERSQL NK KA+ LK+KLLVIA+EQRA+E+ I+GD V+A W
Sbjct: 241 AVRIVHLPSGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEVADIKGDIVEAAW 300
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
G QIRNYVFHPY++VKD+RT ET+D+ SV+DG LEPFI L+ S
Sbjct: 301 GNQIRNYVFHPYQMVKDLRTMQETNDLDSVLDGGLEPFIHELLRMNIS 348
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 79/124 (63%), Gaps = 2/124 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
+R + +L+ + ELE +A +FW+N+ EA++ + L DVK ++ LL +KT + DA
Sbjct: 2 LRIVFDVPRLKAKRRELEQISAQPAFWENQEEAKKQMLILDDVKAQLELLDKWKTFISDA 61
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
++L ++ + +LE + K+L + LD++E +LL G YDKEGAV+SI AGAGG
Sbjct: 62 NASLELYS-LEPEEEMILESKQGL-KKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGG 119
Query: 141 TDAQ 144
TDAQ
Sbjct: 120 TDAQ 123
>gi|78778568|ref|YP_396680.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
9312]
gi|78712067|gb|ABB49244.1| bacterial peptide chain release factor 2 (bRF-2) [Prochlorococcus
marinus str. MIT 9312]
Length = 354
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 102/176 (57%), Positives = 139/176 (78%), Gaps = 5/176 (2%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ QTSF+G EVMP L ++++ + IPE+DLEI+ SR+GG GGQNVNKVET
Sbjct: 182 LVRISPFNANGKRQTSFAGVEVMPKL-DDNISLDIPEKDLEITTSRSGGAGGQNVNKVET 240
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRI H+P+G++VRCT+ERSQL NK KA+ LK+KLLVIA+EQRA+EI I+GD V+A W
Sbjct: 241 AVRIVHLPSGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEIADIKGDIVEAAW 300
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDA 306
G QIRNYVFHPY++VKD+RT ET+++ SV+DG LEPFI L+ M++S++++
Sbjct: 301 GNQIRNYVFHPYQMVKDLRTMQETNELDSVLDGGLEPFIHELLR----MNISSNES 352
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 76/124 (61%), Gaps = 2/124 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
+R + +L+ + ELE +A FW+N+ A++ + L DVK ++ LL +KT + DA
Sbjct: 2 LRIVFDVPRLKAKRRELEQISAQPEFWENQEAAKKQMLILDDVKAQLELLDKWKTFISDA 61
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
++L ++ + +LE + K+L LD++E +LL G YDKEGAV+SI AGAGG
Sbjct: 62 NASLELYS-LEPEEEMILESQQGL-KKLRDNLDKWEFERLLCGEYDKEGAVVSIKAGAGG 119
Query: 141 TDAQ 144
TDAQ
Sbjct: 120 TDAQ 123
>gi|126695538|ref|YP_001090424.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
9301]
gi|126542581|gb|ABO16823.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
9301]
Length = 354
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 132/168 (78%), Gaps = 1/168 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ QTSF+G EVMP L ++++ + IPE+DLEI+ SR+GG GGQNVNKVET
Sbjct: 182 LVRISPFNANGKRQTSFAGVEVMPKL-DDNISLDIPEKDLEITTSRSGGAGGQNVNKVET 240
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRI H+P+G++VRCT+ERSQL NK KA+ LK+KLLVIA+EQRA+E+ I+GD V+A W
Sbjct: 241 AVRIVHLPSGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEVADIKGDIVEAAW 300
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
G QIRNYVFHPY++VKD+RT ET+++ SV+DG LEPFI L+ S
Sbjct: 301 GNQIRNYVFHPYQMVKDLRTMQETNELDSVLDGGLEPFIHELLRMNIS 348
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 78/124 (62%), Gaps = 2/124 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
+R + +L+ + ELE +A FW+N+ EA++ + L DVK ++ LL +KT + DA
Sbjct: 2 LRIVFDVPRLKAKRRELEQISAQPEFWENQEEAKKQMLILDDVKAQLELLDKWKTFISDA 61
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
++L ++ + +LE + K+L + LD++E +LL G YDKEGAV+SI AGAGG
Sbjct: 62 NASLELYS-LEPEEEMILESKQGL-KKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGG 119
Query: 141 TDAQ 144
TDAQ
Sbjct: 120 TDAQ 123
>gi|307155327|ref|YP_003890711.1| hypothetical protein Cyan7822_5564 [Cyanothece sp. PCC 7822]
gi|306985555|gb|ADN17436.1| hypothetical protein Cyan7822_5564 [Cyanothece sp. PCC 7822]
Length = 370
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/276 (49%), Positives = 177/276 (64%), Gaps = 14/276 (5%)
Query: 23 ASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLLTDFKTKMDD 79
A L+QL EL E++ S +D + A T+ A TD +D +L T+ +
Sbjct: 98 AQTNLEQLNHELERWELQQLLSGLYDAKG-AVLTINAGAGGTDAQDWAEMLLRMYTRWGE 156
Query: 80 AVTI-VKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGA 138
V L E + +AGL ++A++ E A L G ++ I+
Sbjct: 157 KQGYKVHLAEISEGDEAGL--KSATLEIEGRYAYG------YLKGEKGTH-RLVRISPFN 207
Query: 139 GGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 198
QTSF+G EVMP L E+++V+IPE+DLEI+ SR+GGKGGQNVNKVETAVR+ HIP
Sbjct: 208 ANGKRQTSFAGVEVMPNLGVEAVNVEIPEKDLEITTSRSGGKGGQNVNKVETAVRVVHIP 267
Query: 199 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 258
TG+ VRCT+ERSQL NK KAL+ LKAKLLVI EQRA EI QIRGD V+A WG QIRNYV
Sbjct: 268 TGLAVRCTQERSQLQNKEKALALLKAKLLVILTEQRAKEIAQIRGDMVEAAWGNQIRNYV 327
Query: 259 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
FHPY++VKD+RT ETSD+ +VMDG+L FI++YL+
Sbjct: 328 FHPYQMVKDLRTNVETSDVGAVMDGDLNGFIEAYLR 363
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 89/138 (64%), Gaps = 2/138 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L++++E R+ + + L L ++ +LE AA FWD+ AQ TLQ L ++K
Sbjct: 6 LKREIELIGSRLGKTQDYLDLPTLGAKIKDLEQVAAQPEFWDSPDMAQTTLQELNELKSA 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ L ++T+++DA IV+L E + D LLEEA + +++LN L+++EL QLLSG YD
Sbjct: 66 LELYQQWQTQLEDAKAIVELLELEE--DTSLLEEAQTNLEQLNHELERWELQQLLSGLYD 123
Query: 127 KEGAVISITAGAGGTDAQ 144
+GAV++I AGAGGTDAQ
Sbjct: 124 AKGAVLTINAGAGGTDAQ 141
>gi|123967735|ref|YP_001008593.1| peptide chain release factor 2 [Prochlorococcus marinus str.
AS9601]
gi|123197845|gb|ABM69486.1| peptide chain release factor RF-2 [Prochlorococcus marinus str.
AS9601]
Length = 354
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 132/168 (78%), Gaps = 1/168 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ QTSF+G EVMP L ++++ + IPE+DLEI+ SR+GG GGQNVNKVET
Sbjct: 182 LVRISPFNANGKRQTSFAGVEVMPKL-DDNISLDIPEKDLEITTSRSGGAGGQNVNKVET 240
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRI H+P+G++VRCT+ERSQL NK KA+ LK+KLLVIA+EQRA+E+ I+GD V+A W
Sbjct: 241 AVRIVHLPSGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEVADIKGDIVEAAW 300
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
G QIRNYVFHPY++VKD+RT ET+++ SV+DG L+PFI L+ S
Sbjct: 301 GNQIRNYVFHPYQMVKDLRTMQETNELDSVLDGGLDPFIHELLRMNIS 348
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 78/124 (62%), Gaps = 2/124 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
+R + +L+ + ELE +A FWDN+ EA++ + L DVK ++ LL +KT + DA
Sbjct: 2 LRIVFDVPRLKAKRKELEQISAQPEFWDNQEEAKKQMLILDDVKAQLELLDKWKTFISDA 61
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
++L ++ + +LE + K+L + LD++E +LL G YDKEGAV+SI AGAGG
Sbjct: 62 NASLELYS-LEPEEEMILESQLGL-KKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGG 119
Query: 141 TDAQ 144
TDAQ
Sbjct: 120 TDAQ 123
>gi|416376039|ref|ZP_11683417.1| Peptide chain release factor 2 [Crocosphaera watsonii WH 0003]
gi|357266445|gb|EHJ15072.1| Peptide chain release factor 2 [Crocosphaera watsonii WH 0003]
Length = 358
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/152 (67%), Positives = 129/152 (84%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G E+MP L E+ + V IP++DL+IS SR+GGKGGQNVNKVETAVR+ H+PTG+ V
Sbjct: 201 QTSFAGIEIMPALEEDDLKVDIPDKDLDISTSRSGGKGGQNVNKVETAVRVVHVPTGIAV 260
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KAL+ LKAKLL+IAEEQRA EI +IRGD V+A WG QIRNYVFHPY+
Sbjct: 261 RCTQERSQLQNKEKALALLKAKLLIIAEEQRAQEIAEIRGDIVEAAWGTQIRNYVFHPYQ 320
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
+VKD+RT ET+D+ VMDG L+ FI++YL++
Sbjct: 321 MVKDLRTNIETTDVNGVMDGSLDEFIEAYLRF 352
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L L+ + +LE +A FWD AQ TLQ L D+K ++ + ++DD I +L
Sbjct: 14 LPALKAAIKDLENTSAQPQFWDQPETAQTTLQELNDLKSQLEQYQQWCLQLDDTKAIAEL 73
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E D DA L +EA I +LN LD++EL QLLSG YD +GAV++I AGAGGTDAQ
Sbjct: 74 LELED--DATLRQEAEDNIIQLNHNLDRWELQQLLSGIYDTKGAVLTINAGAGGTDAQ 129
>gi|254422250|ref|ZP_05035968.1| peptide chain release factor 2 [Synechococcus sp. PCC 7335]
gi|196189739|gb|EDX84703.1| peptide chain release factor 2 [Synechococcus sp. PCC 7335]
Length = 345
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 96/150 (64%), Positives = 124/150 (82%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP+L ++ +++ IP++DLEI SR+GG GGQNVNKVETAVRITH+PT ++V
Sbjct: 185 QTSFAGVEVMPIL-DQKVELDIPDKDLEIKTSRSGGAGGQNVNKVETAVRITHLPTSISV 243
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KA++ L +KLLVIA+EQR I IRGD V+A WG QIRNYVFHPY+
Sbjct: 244 RCTQERSQLQNKEKAMALLTSKLLVIAQEQRTQAIADIRGDMVEAAWGNQIRNYVFHPYQ 303
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD+RT ET+ + VM+G+LE FI++YL
Sbjct: 304 MVKDLRTSVETTAVDDVMNGDLEAFIQAYL 333
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 75/115 (65%), Gaps = 2/115 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+ ++ +LE +A FWD + AQ++LQ L D K ++ + + T ++D+ I++L +
Sbjct: 1 MNAKIKDLEQLSAQPDFWDEQESAQKSLQELNDYKANLDQVEGWSTSLEDSEAILELLDL 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D LL EA S + L+K LDQ+EL QLLSGPYDK GAV++I AGAGGTDAQ
Sbjct: 61 --EQDESLLLEAESTVNRLSKELDQWELQQLLSGPYDKAGAVLTINAGAGGTDAQ 113
>gi|67920292|ref|ZP_00513812.1| Peptide chain release factor 2 [Crocosphaera watsonii WH 8501]
gi|67857776|gb|EAM53015.1| Peptide chain release factor 2 [Crocosphaera watsonii WH 8501]
Length = 358
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/152 (67%), Positives = 129/152 (84%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G E+MP L E+ + V IP++DL+IS SR+GGKGGQNVNKVETAVR+ H+PTG+ V
Sbjct: 201 QTSFAGIEIMPALEEDDLKVDIPDKDLDISTSRSGGKGGQNVNKVETAVRVVHVPTGIAV 260
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KAL+ LKAKLL+IAEEQRA EI +IRGD V+A WG QIRNYVFHPY+
Sbjct: 261 RCTQERSQLQNKEKALALLKAKLLIIAEEQRAQEIAEIRGDIVEAAWGTQIRNYVFHPYQ 320
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
+VKD+RT ET+D+ VMDG L+ FI++YL++
Sbjct: 321 MVKDLRTNIETTDVNGVMDGSLDEFIEAYLRF 352
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L L+ + +LE +A FWD AQ TLQ L D+K ++ + ++DD I +L
Sbjct: 14 LPALKAVIKDLENTSAQPQFWDQPETAQTTLQELNDLKSQLEQYQQWCLQLDDTKAIAEL 73
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E D DA L +EA I +LN LD++EL QLLSG YD +GAV++I AGAGGTDAQ
Sbjct: 74 LELED--DATLRQEAEDNIIQLNHNLDRWELQQLLSGIYDTKGAVLTINAGAGGTDAQ 129
>gi|443327861|ref|ZP_21056468.1| peptide chain release factor 2 [Xenococcus sp. PCC 7305]
gi|442792472|gb|ELS01952.1| peptide chain release factor 2 [Xenococcus sp. PCC 7305]
Length = 314
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/276 (48%), Positives = 182/276 (65%), Gaps = 14/276 (5%)
Query: 23 ASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLLTDFKTKMDD 79
A L QL++EL E++ S +D+R A T+ A TD +D +L T+ +
Sbjct: 43 AQTSLIQLKQELDLWELQQLLSGTYDSRG-AILTINAGAGGTDAQDWAEMLLRMYTRWGE 101
Query: 80 AVTI-VKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGA 138
V+L EE +AG+ ++A++ E A + + G + ++ I+
Sbjct: 102 KQGYKVRLVEESAGDEAGI--KSATLEIEGRYA---YGYLKAEKGTH----RLVRISPFN 152
Query: 139 GGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 198
QTSF+G EVMP L +ES++++IPE+DLEI+ SRAGGKGGQNVNKVETAVRI H+P
Sbjct: 153 ANGKRQTSFAGIEVMPNLGDESIELEIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHLP 212
Query: 199 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 258
TG+ VRCT+ERSQL NK KAL+ LKAKLLV+ EEQRA ++ +IRGD V+A WG QIRNYV
Sbjct: 213 TGLAVRCTQERSQLQNKEKALALLKAKLLVVVEEQRAQQVAEIRGDMVEAAWGNQIRNYV 272
Query: 259 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
FHPY++VKD+RT +T DI VMDG L PFI++YL+
Sbjct: 273 FHPYQMVKDLRTELDTGDINDVMDGNLNPFIEAYLR 308
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 57 LQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFE 116
+Q L D+K + + +DDA I +L E TD L EEA + + +L + LD +E
Sbjct: 1 MQELNDLKSNLAQYQQWHDVLDDAQAIAELLEL--ETDQALAEEAQTSLIQLKQELDLWE 58
Query: 117 LTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L QLLSG YD GA+++I AGAGGTDAQ
Sbjct: 59 LQQLLSGTYDSRGAILTINAGAGGTDAQ 86
>gi|300868546|ref|ZP_07113164.1| peptide chain release factor 2 [Oscillatoria sp. PCC 6506]
gi|300333459|emb|CBN58356.1| peptide chain release factor 2 [Oscillatoria sp. PCC 6506]
Length = 291
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/286 (47%), Positives = 180/286 (62%), Gaps = 15/286 (5%)
Query: 23 ASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLLTDFKTKMDD 79
A L QL +EL + E++ S +D A T+ A TD +D +L T+ +
Sbjct: 16 AYTNLSQLSRELDQWELQQLLSGPYDA-GGAVLTINAGAGGTDAQDWAEMLLRMYTRWGE 74
Query: 80 AVTI-VKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGA 138
V L E + +AGL I+ + E G + ++ I+
Sbjct: 75 RQGYKVHLAEISEGDEAGLKSATLEIVGRYAYGYLRSE-----KGTHR----LVRISPFN 125
Query: 139 GGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 198
QTSF+G EVMP+L + S+++ IPE+DLE++ SRAGGKGGQNVNKVETAVRI H+P
Sbjct: 126 ANDKRQTSFAGVEVMPIL-DRSVELDIPEKDLEVTTSRAGGKGGQNVNKVETAVRIVHLP 184
Query: 199 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 258
TG+ VRCTEERSQL NK KAL LKAKLLV+A EQRA EI +IRGD V+A WG QIRNYV
Sbjct: 185 TGLAVRCTEERSQLQNKEKALVLLKAKLLVVAREQRAKEIAEIRGDMVEAAWGNQIRNYV 244
Query: 259 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSAS 304
FHPY++VKD+RTG ET+ I VM+GELEPFI++YL+ + + SA+
Sbjct: 245 FHPYQMVKDLRTGVETTAIADVMNGELEPFIQAYLRQENQLVESAA 290
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 42/52 (80%)
Query: 93 TDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
TD LL+EA + + +L++ LDQ+EL QLLSGPYD GAV++I AGAGGTDAQ
Sbjct: 8 TDESLLQEAYTNLSQLSRELDQWELQQLLSGPYDAGGAVLTINAGAGGTDAQ 59
>gi|302847640|ref|XP_002955354.1| hypothetical protein VOLCADRAFT_106758 [Volvox carteri f.
nagariensis]
gi|300259426|gb|EFJ43654.1| hypothetical protein VOLCADRAFT_106758 [Volvox carteri f.
nagariensis]
Length = 242
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/164 (60%), Positives = 127/164 (77%), Gaps = 1/164 (0%)
Query: 144 QTSFSGAEVMPLL-PEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVT 202
QTSF+G +VMP+L P + D+ + E DLE S R+GGKGGQNVNKVET VRI H+PTG++
Sbjct: 73 QTSFAGVDVMPVLGPGDLPDLDLNERDLEFSTMRSGGKGGQNVNKVETGVRIVHLPTGIS 132
Query: 203 VRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPY 262
V+CT+ERSQ N+ A+ LK++LLV+ EEQ A + +IRGD VKAEWGQQIRNYVFHPY
Sbjct: 133 VKCTQERSQSQNREIAMDILKSRLLVVLEEQNARRVAEIRGDLVKAEWGQQIRNYVFHPY 192
Query: 263 KLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDA 306
KLVKD RTG ETSD+ +V+DG+L F+ +YL+ K ++ AS A
Sbjct: 193 KLVKDTRTGVETSDVAAVLDGDLADFMAAYLRMKGRKAVGASLA 236
>gi|412993319|emb|CCO16852.1| peptide chain release factor 2 [Bathycoccus prasinos]
Length = 423
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/161 (59%), Positives = 125/161 (77%), Gaps = 3/161 (1%)
Query: 139 GGTDAQTSFSGAEVMPLL---PEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRIT 195
G + QTSF+ +V PL EE+ ++ IPE+DLEI+ R+GG GGQNVNKVETAVRI
Sbjct: 256 GDSSRQTSFAAVDVCPLFEDESEEAGEMNIPEKDLEITTMRSGGAGGQNVNKVETAVRIR 315
Query: 196 HIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIR 255
HIPT +TVRC E+RSQ+ NK KA+ RLKAKL + E+QR ++K+IRGD VKAE+G+QIR
Sbjct: 316 HIPTDITVRCDEDRSQMMNKAKAMVRLKAKLAAVLEQQRLQDVKEIRGDVVKAEFGEQIR 375
Query: 256 NYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
NYV HPYK+VKDVR+G ET+D V++G +PF+K YL+++
Sbjct: 376 NYVLHPYKVVKDVRSGWETADTEGVLNGNFDPFMKEYLRFR 416
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 24/158 (15%)
Query: 4 FYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDV 63
F +LRK ++A D + + + LEK LE K D FW N+ EA+ + L+ V
Sbjct: 38 FQSLRKRADSAMDILNKTK-------LEKSRELLETKQNDPEFWSNQTEAKRVTKELSFV 90
Query: 64 KDKINLLTDFKTKMDDA----VTIVKLTEEMDSTDAG-------------LLEEAASIIK 106
+ ++ + DD + + ++ D+ + G L EA
Sbjct: 91 QSQLRRAELVEATRDDVELSLEMLEEEQQQQDADNGGNDENKGGNEDYELLRTEAIRSSI 150
Query: 107 ELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+LN+ L +FE ++L G YDK G+ + I AGAGGTDAQ
Sbjct: 151 KLNEMLSEFETEKMLGGKYDKLGSELFIYAGAGGTDAQ 188
>gi|113475767|ref|YP_721828.1| peptide chain release factor 2 [Trichodesmium erythraeum IMS101]
gi|110166815|gb|ABG51355.1| bacterial peptide chain release factor 2 (bRF-2) [Trichodesmium
erythraeum IMS101]
Length = 288
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/161 (65%), Positives = 135/161 (83%), Gaps = 1/161 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP+L + S+++ IPE+DLEI+ SR+GGKGGQNVNKVETAVR+ HIPTG++V
Sbjct: 128 QTSFAGVEVMPIL-DHSVELDIPEKDLEITTSRSGGKGGQNVNKVETAVRVVHIPTGLSV 186
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KAL+ LKA+LL+IA+EQRA EI +IRGD V+A WG QIRNYVFHPY+
Sbjct: 187 RCTQERSQLQNKDKALALLKARLLIIAQEQRAQEINEIRGDMVEAAWGNQIRNYVFHPYQ 246
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSAS 304
+VKD+RT ET+ I VM+GEL+ FI++YL+ + M S S
Sbjct: 247 MVKDLRTQKETTAINDVMNGELDQFIEAYLRQENQMVESQS 287
>gi|33860740|ref|NP_892301.1| peptide chain release factor 2 [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33633682|emb|CAE18639.1| peptide chain release factor RF-2 [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 373
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 143/369 (38%), Positives = 200/369 (54%), Gaps = 73/369 (19%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M D +KD+ + R+ + + L + ELE AA FW N+A+A++ + L
Sbjct: 1 MIDITEFKKDLSELTKRLGNAQDCLDVPNLVAKKKELEQIAAQPEFWGNQADAKKHMLNL 60
Query: 61 TDVKDKINLLTDFKTKMDDAVT--------------------IVKLTEEMDSTD-----A 95
DV+D++ LL +K + DA +V L E +D +
Sbjct: 61 DDVRDQLQLLDKWKMFISDAEASLELYSLEPEEEMIVESHQGLVTLRENLDKWEFQRLLC 120
Query: 96 GLLEEAASIIKELN------KALDQFE-LTQLLSGPYDKEGAVISITAGAGGTDA----- 143
G ++ A+I+ +N A D E L ++ S D G + IT + G +A
Sbjct: 121 GEYDKEAAIVS-INAGAGGTDAQDWVEILLRMYSRWVDNNGMSLEITDLSDGEEAGIKSV 179
Query: 144 ----------------------------------QTSFSGAEVMPLLPEESMDVQIPEED 169
QTSF+G EVMP L ++S+ + IP++D
Sbjct: 180 TFEVNGKYAYGYLQNEKGTHRLVRISPFNANGKRQTSFAGVEVMPKL-DQSISLDIPDKD 238
Query: 170 LEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVI 229
LEI+ SR+GG GGQNVNKVETAVRI H+P+G+ VRCT+ERSQL NK KA+ LKAKLLVI
Sbjct: 239 LEITTSRSGGAGGQNVNKVETAVRIVHLPSGIAVRCTQERSQLQNKEKAMLLLKAKLLVI 298
Query: 230 AEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFI 289
A+EQRASEI I+GD V+A WG QIRNYVFHPY++VKD+RT ET+D+ +V++G L+ FI
Sbjct: 299 AKEQRASEISDIKGDIVEAAWGNQIRNYVFHPYQMVKDLRTMKETNDLDAVLNGGLDQFI 358
Query: 290 KSYLKYKYS 298
L+ S
Sbjct: 359 HELLRMNIS 367
>gi|325291337|ref|YP_004267518.1| peptide chain release factor 2 (bRF-2) [Syntrophobotulus glycolicus
DSM 8271]
gi|324966738|gb|ADY57517.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophobotulus
glycolicus DSM 8271]
Length = 371
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/361 (34%), Positives = 187/361 (51%), Gaps = 75/361 (20%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+ +K++E R+ ++R S + E ++ +LE + FWD+R+ AQ+ +Q LT KD
Sbjct: 4 DWKKEIENLVARLADLRVSLDVPAREVKIGQLEEELNRPDFWDDRSNAQKIMQELTGNKD 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
K+ L + KT+ +D + ++ M+ D+ L +E I + D+ EL LLSG Y
Sbjct: 64 KVALFGELKTETEDLEVLWQMA--MEEDDSSLEDEIVKDIHRIRAQYDELELEILLSGEY 121
Query: 126 DKEGAVISITAGAGGTDAQTSFS---------------GAEVMPLLPEE----------- 159
D+ A+I++ +GAGGT+AQ E + LLP E
Sbjct: 122 DRNNAIITLHSGAGGTEAQDWVQMLYRMYLRWGERRRYKVETLDLLPGEEAGIKSVTFSL 181
Query: 160 -----------------------------------SMDVQIPE-----------EDLEIS 173
S+DV IPE EDL++
Sbjct: 182 AGENAFGYAKCEKGVHRLVRISPFDSSGRRHTSFASVDV-IPEVNEDMEINIDSEDLKVD 240
Query: 174 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 233
R+GG GGQ+VNK ++AVRITHIP+G+ V+C ERSQ+ N+ + L+AKLL + +Q
Sbjct: 241 TYRSGGAGGQHVNKTDSAVRITHIPSGIIVQCQSERSQIQNRAYCMRILQAKLLELKRKQ 300
Query: 234 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+ E+ +IRG+ WG QIR+YVFHPY +VKD RT ET ++ SVMDGE++ FI +YL
Sbjct: 301 QEEELLEIRGELNDIAWGSQIRSYVFHPYSMVKDHRTNTETGNVNSVMDGEIDLFISAYL 360
Query: 294 K 294
K
Sbjct: 361 K 361
>gi|37520802|ref|NP_924179.1| peptide chain release factor 2 [Gloeobacter violaceus PCC 7421]
gi|35211797|dbj|BAC89174.1| peptide chain release factor [Gloeobacter violaceus PCC 7421]
Length = 354
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 125/156 (80%), Gaps = 1/156 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP+L ++S+ V I +D+EI R+GGKGGQNVNKVET VR+TH PTG++V
Sbjct: 200 QTSFAGVEVMPVL-DDSVQVDIRPDDIEIDTFRSGGKGGQNVNKVETGVRVTHKPTGISV 258
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ER+QL N+ KA+ LKA+LLV+ EE+R + IRG+AV A WG QIR+YVFHPY+
Sbjct: 259 RCTQERAQLQNRNKAMEMLKARLLVLEEEKRQQHLSDIRGEAVDAAWGNQIRSYVFHPYQ 318
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSM 299
+VKD+RT ETSD+ VM+G++EPFI+ YL+ ++ +
Sbjct: 319 MVKDLRTEEETSDVTGVMNGKIEPFIERYLRRQHKL 354
>gi|302820744|ref|XP_002992038.1| hypothetical protein SELMODRAFT_430253 [Selaginella moellendorffii]
gi|300140160|gb|EFJ06887.1| hypothetical protein SELMODRAFT_430253 [Selaginella moellendorffii]
Length = 654
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/157 (63%), Positives = 122/157 (77%), Gaps = 5/157 (3%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVM + ++ P + + R+GGKGGQNVN VETAVR+THIPTG+ +
Sbjct: 162 QTSFAGVEVMHV--RTKLNSTQPGQA---TLCRSGGKGGQNVNMVETAVRVTHIPTGIAL 216
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RC+E+RSQL NKIKA+ LK+KLLVI E+QRA+EIK+IRGD VKAEWGQQIRNYVFHPYK
Sbjct: 217 RCSEKRSQLQNKIKAIVLLKSKLLVILEDQRAAEIKEIRGDVVKAEWGQQIRNYVFHPYK 276
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 300
LV D+RT ETSDI +MDG+LEP + +YL K S S
Sbjct: 277 LVMDLRTNVETSDISGIMDGKLEPLLTAYLMSKQSSS 313
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 265 VKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
++D+RT ETSDI +M G LEP + +YL K S
Sbjct: 79 LQDLRTNTETSDISVIMGGNLEPLLTAYLMSKQS 112
>gi|119486315|ref|ZP_01620374.1| Peptide chain release factor 2 [Lyngbya sp. PCC 8106]
gi|119456528|gb|EAW37658.1| Peptide chain release factor 2 [Lyngbya sp. PCC 8106]
Length = 308
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/161 (63%), Positives = 134/161 (83%), Gaps = 1/161 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G E+MP++ ++ + ++IPE+DLE++ SRAGGKGGQNVNKVETAVRI H+PTG+ V
Sbjct: 148 QTSFAGVEIMPMI-DQGVHLEIPEKDLEVTTSRAGGKGGQNVNKVETAVRIVHLPTGIAV 206
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KAL+ LKAKLL+IA+EQRA EI +IRGD V+A WG QIRNYVFHPY+
Sbjct: 207 RCTQERSQLQNKEKALALLKAKLLIIAQEQRAQEIAEIRGDLVEAAWGNQIRNYVFHPYQ 266
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSAS 304
+VKD+RT ET+ I VM+GEL+ FI++YL+ + + S S
Sbjct: 267 MVKDLRTSEETTAIDDVMNGELDRFIQAYLRQENQLVTSES 307
>gi|124024426|ref|YP_001018733.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
9303]
gi|123964712|gb|ABM79468.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
9303]
Length = 319
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 134/301 (44%), Positives = 192/301 (63%), Gaps = 31/301 (10%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL-- 60
+ Y+L D E S+ A +GLQQL + L E++ S +D + A ++ A
Sbjct: 29 ELYDLEPDDEMLSE------AQSGLQQLRQGLDRWELERLLSGEYDKKG-AVLSINAGAG 81
Query: 61 -TDVKDKINLLTDFKTKM----DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQF 115
TD +D +L T+ D VT+ +L+E +AG+ ++A++ E A
Sbjct: 82 GTDAQDWAQMLLRMYTRWAEDHDMRVTVDELSE---GEEAGI--KSATVEIEGRYAYGYL 136
Query: 116 ELTQLLSGPYDKEGA--VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 173
+++G ++ I+ QTSF+G E+MP + +E +++ IPE+DLE++
Sbjct: 137 R---------NEKGTHRLVRISPFNANGKRQTSFAGVEIMPKIDQE-VELDIPEKDLEVT 186
Query: 174 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 233
SR+GG GGQNVNKVETAVRI HIPTG+ VRCT+ERSQL NK KAL+ LKAKL+VIA+EQ
Sbjct: 187 TSRSGGAGGQNVNKVETAVRILHIPTGLAVRCTQERSQLQNKEKALALLKAKLMVIAQEQ 246
Query: 234 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
RA+EI IRGD V+A WG QIRNYVFHPY++VKD+RT ET+D+ +VM+GEL+ FI++ L
Sbjct: 247 RAAEIADIRGDIVEAAWGNQIRNYVFHPYQMVKDLRTAEETTDVQAVMNGELDRFIQTLL 306
Query: 294 K 294
+
Sbjct: 307 R 307
>gi|414887032|tpg|DAA63046.1| TPA: hypothetical protein ZEAMMB73_861498, partial [Zea mays]
Length = 421
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 123/144 (85%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+QDFY LRKDVE A +RV E+R SAGLQQLE+++A LE K++DSS WD+ ++AQ L +L
Sbjct: 132 LQDFYILRKDVELALERVNEVRQSAGLQQLEEDIASLENKSSDSSLWDDPSKAQGILVSL 191
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
T+VKDK+ LL DFK ++++A TIVKLTEE+DS D GLLEEA+ IIK LNKALD FE+TQL
Sbjct: 192 TEVKDKVKLLNDFKLQIEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQL 251
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
LSGPYDKEGAVI+I+AGAGGTDAQ
Sbjct: 252 LSGPYDKEGAVINISAGAGGTDAQ 275
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 58/63 (92%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMPLLPEESM V IPEEDLEISF+RAGGKGGQNVNKVETAVR+ HIPTG+ V
Sbjct: 347 QTSFAGVEVMPLLPEESMAVDIPEEDLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAV 406
Query: 204 RCT 206
RC+
Sbjct: 407 RCS 409
>gi|254411738|ref|ZP_05025514.1| peptide chain release factor 2 [Coleofasciculus chthonoplastes PCC
7420]
gi|196181460|gb|EDX76448.1| peptide chain release factor 2 [Coleofasciculus chthonoplastes PCC
7420]
Length = 305
Score = 203 bits (517), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 104/151 (68%), Positives = 128/151 (84%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP+L E+ +D+ IPE DLEI+ SR+GGKGGQNVNKVETAVR+ HIPT + V
Sbjct: 150 QTSFAGVEVMPILNED-VDLDIPETDLEITTSRSGGKGGQNVNKVETAVRVKHIPTDIAV 208
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KAL+ LKAKLLVIA+EQRA EI +IRGD V+A WG QIRNYVFHPY+
Sbjct: 209 RCTQERSQLQNKEKALALLKAKLLVIAQEQRAQEIAEIRGDMVEAAWGNQIRNYVFHPYQ 268
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD+RT ET+ + V++G L+PFI++YL+
Sbjct: 269 LVKDLRTNVETTGVDDVLNGTLDPFIEAYLR 299
>gi|425457642|ref|ZP_18837341.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9807]
gi|389800946|emb|CCI19823.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9807]
Length = 330
Score = 203 bits (516), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 98/151 (64%), Positives = 130/151 (86%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP+L ++++ V+IP++DLEI+ +R+GGKGGQNVNKVETAVR+ H+PTG+ V
Sbjct: 175 QTSFAGVEVMPILGDDAVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KAL+ LKAKLL+IA EQ+A I +IRGD V+A WG QIRNYVFHPY+
Sbjct: 235 RCTQERSQLQNKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQ 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD+R+ ET+D+ VM+G+L+ FI++YL+
Sbjct: 295 LVKDLRSNVETTDVTGVMNGDLDSFIEAYLR 325
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 67/104 (64%), Gaps = 2/104 (1%)
Query: 41 AADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEE 100
AA S+FWDN AQ+TLQ L + K + + +++D I++L E +D LLEE
Sbjct: 2 AAVSTFWDNPDTAQKTLQELNECKSYLETYQSWCEQLEDTKAIIELLEL--ESDRALLEE 59
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
A + L LD++EL QLL+GPYD +GAV++I AGAGGTDAQ
Sbjct: 60 ATDNLTHLQHDLDRWELQQLLNGPYDAKGAVLTINAGAGGTDAQ 103
>gi|425452562|ref|ZP_18832379.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 7941]
gi|389765600|emb|CCI08556.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 7941]
Length = 336
Score = 203 bits (516), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 98/151 (64%), Positives = 130/151 (86%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP+L ++++ V+IP++DLEI+ +R+GGKGGQNVNKVETAVR+ H+PTG+ V
Sbjct: 175 QTSFAGVEVMPILGDDAVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KAL+ LKAKLL+IA EQ+A I +IRGD V+A WG QIRNYVFHPY+
Sbjct: 235 RCTQERSQLQNKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQ 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD+R+ ET+D+ VM+G+L+ FI++YL+
Sbjct: 295 LVKDLRSNVETTDVTGVMNGDLDSFIEAYLR 325
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 41 AADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEE 100
AA +FWDN AQ+TLQ L + K + + +++D I++L E +D LLEE
Sbjct: 2 AAVPTFWDNPDTAQKTLQELNECKSSLETYQSWCEQLEDTKAIIELLEL--ESDRALLEE 59
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
A + L LD++EL QLL+GPYD +GAV+++ AGAGGTDAQ
Sbjct: 60 ATDNLTHLQHDLDRWELQQLLNGPYDAKGAVLTVNAGAGGTDAQ 103
>gi|422303193|ref|ZP_16390547.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9806]
gi|425438279|ref|ZP_18818684.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9432]
gi|389676584|emb|CCH94420.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9432]
gi|389791881|emb|CCI12350.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9806]
Length = 336
Score = 203 bits (516), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 98/151 (64%), Positives = 130/151 (86%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP+L ++++ V+IP++DLEI+ +R+GGKGGQNVNKVETAVR+ H+PTG+ V
Sbjct: 175 QTSFAGVEVMPILGDDAVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KAL+ LKAKLL+IA EQ+A I +IRGD V+A WG QIRNYVFHPY+
Sbjct: 235 RCTQERSQLQNKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQ 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD+R+ ET+D+ VM+G+L+ FI++YL+
Sbjct: 295 LVKDLRSNVETTDVTGVMNGDLDSFIEAYLR 325
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 41 AADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEE 100
AA +FWDN AQ+TLQ L + K + + +++D I++L E +D LLEE
Sbjct: 2 AAVPTFWDNPDTAQKTLQELNECKSSLETYQSWCEQLEDTKAIIELLEL--ESDRALLEE 59
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
A + L LD++EL QLL+GPYD +GAV++I AGAGGTDAQ
Sbjct: 60 ATDNLTHLQHDLDRWELQQLLNGPYDAKGAVLTINAGAGGTDAQ 103
>gi|425463014|ref|ZP_18842477.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9808]
gi|440756279|ref|ZP_20935480.1| peptide chain release factor 2 [Microcystis aeruginosa TAIHU98]
gi|389823793|emb|CCI27765.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9808]
gi|440173501|gb|ELP52959.1| peptide chain release factor 2 [Microcystis aeruginosa TAIHU98]
Length = 336
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/151 (64%), Positives = 130/151 (86%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP+L ++++ V+IP++DLEI+ +R+GGKGGQNVNKVETAVR+ H+PTG+ V
Sbjct: 175 QTSFAGVEVMPILGDDAVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KAL+ LKAKLL+IA EQ+A I +IRGD V+A WG QIRNYVFHPY+
Sbjct: 235 RCTQERSQLQNKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQ 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD+R+ ET+D+ VM+G+L+ FI++YL+
Sbjct: 295 LVKDLRSNVETTDVTGVMNGDLDSFIEAYLR 325
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 41 AADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEE 100
AA +FWDN AQ+TLQ L + K + + +++D I++L E +D LLEE
Sbjct: 2 AAVPTFWDNPDTAQKTLQELNECKSSLETYQGWCEQLEDTKAIIELLEL--ESDRALLEE 59
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
A + L LD++EL QLL+GPYD +GAV++I AGAGGTDAQ
Sbjct: 60 ATDNLTHLQHDLDRWELQQLLNGPYDAKGAVLTINAGAGGTDAQ 103
>gi|166363701|ref|YP_001655974.1| peptide chain release factor 2 [Microcystis aeruginosa NIES-843]
gi|425440004|ref|ZP_18820315.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9717]
gi|425467766|ref|ZP_18847045.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9809]
gi|166086074|dbj|BAG00782.1| peptide chain release factor 2 [Microcystis aeruginosa NIES-843]
gi|389719660|emb|CCH96545.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9717]
gi|389829362|emb|CCI29359.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9809]
Length = 330
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/151 (64%), Positives = 130/151 (86%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP+L ++++ V+IP++DLEI+ +R+GGKGGQNVNKVETAVR+ H+PTG+ V
Sbjct: 175 QTSFAGVEVMPILGDDAVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KAL+ LKAKLL+IA EQ+A I +IRGD V+A WG QIRNYVFHPY+
Sbjct: 235 RCTQERSQLQNKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQ 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD+R+ ET+D+ VM+G+L+ FI++YL+
Sbjct: 295 LVKDLRSNVETTDVTRVMNGDLDSFIEAYLR 325
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 41 AADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTE-EMDSTDAGLLE 99
AA +FWDN AQ+TLQ L + K + + +++D I++L E E D T LLE
Sbjct: 2 AAVPTFWDNLDTAQKTLQELNECKSSLETYQGWCGQLEDTKAIIELLELESDRT---LLE 58
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EA + L LD++EL QLL+GPYD +GAV++I AGAGGTDAQ
Sbjct: 59 EATDNLTHLQHDLDRWELQQLLNGPYDAKGAVLTINAGAGGTDAQ 103
>gi|414887030|tpg|DAA63044.1| TPA: hypothetical protein ZEAMMB73_861498 [Zea mays]
Length = 364
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 123/144 (85%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+QDFY LRKDVE A +RV E+R SAGLQQLE+++A LE K++DSS WD+ ++AQ L +L
Sbjct: 75 LQDFYILRKDVELALERVNEVRQSAGLQQLEEDIASLENKSSDSSLWDDPSKAQGILVSL 134
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
T+VKDK+ LL DFK ++++A TIVKLTEE+DS D GLLEEA+ IIK LNKALD FE+TQL
Sbjct: 135 TEVKDKVKLLNDFKLQIEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQL 194
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
LSGPYDKEGAVI+I+AGAGGTDAQ
Sbjct: 195 LSGPYDKEGAVINISAGAGGTDAQ 218
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 58/63 (92%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMPLLPEESM V IPEEDLEISF+RAGGKGGQNVNKVETAVR+ HIPTG+ V
Sbjct: 290 QTSFAGVEVMPLLPEESMAVDIPEEDLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAV 349
Query: 204 RCT 206
RC+
Sbjct: 350 RCS 352
>gi|425469717|ref|ZP_18848630.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9701]
gi|389880407|emb|CCI38837.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9701]
Length = 336
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/151 (64%), Positives = 130/151 (86%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP+L ++++ V+IP++DLEI+ +R+GGKGGQNVNKVETAVR+ H+PTG+ V
Sbjct: 175 QTSFAGVEVMPILGDDAVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KAL+ LKAKLL+IA EQ+A I +IRGD V+A WG QIRNYVFHPY+
Sbjct: 235 RCTQERSQLQNKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQ 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD+R+ ET+D+ VM+G+L+ FI++YL+
Sbjct: 295 LVKDLRSNVETTDVTRVMNGDLDSFIEAYLR 325
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 41 AADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTE-EMDSTDAGLLE 99
AA +FWDN AQ+TLQ L + K + + +++D I++L E E D T LLE
Sbjct: 2 AAVPTFWDNPDTAQKTLQELNECKSSLETYQGWCEQLEDTKAIIELLELESDRT---LLE 58
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EA + L LD++EL QLL+GPYD +GAV++I AGAGGTDAQ
Sbjct: 59 EATDNLTHLQHDLDRWELQQLLNGPYDAKGAVLTINAGAGGTDAQ 103
>gi|425444731|ref|ZP_18824775.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9443]
gi|389735466|emb|CCI01036.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9443]
Length = 334
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/151 (64%), Positives = 130/151 (86%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP+L ++++ V+IP++DLEI+ +R+GGKGGQNVNKVETAVR+ H+PTG+ V
Sbjct: 175 QTSFAGVEVMPILGDDAVRVEIPDKDLEITTARSGGKGGQNVNKVETAVRVVHLPTGIAV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KAL+ LKAKLL+IA EQ+A I +IRGD V+A WG QIRNYVFHPY+
Sbjct: 235 RCTQERSQLQNKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQ 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD+R+ ET+D+ VM+G+L+ FI++YL+
Sbjct: 295 LVKDLRSNVETTDVTGVMNGDLDSFIEAYLR 325
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 41 AADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEE 100
AA +FWDN AQ+TLQ L + K + + +++D I++L E +D LLEE
Sbjct: 2 AAVPTFWDNPDTAQKTLQELNECKSSLETYQSWCEQLEDTKAIIELLEL--ESDRALLEE 59
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
A + L LD++EL QLL+GPYD +GAV++I AGAGGTDAQ
Sbjct: 60 ATDNLTHLQHDLDRWELQQLLNGPYDAKGAVLTINAGAGGTDAQ 103
>gi|390439243|ref|ZP_10227653.1| Peptide chain release factor 2 [Microcystis sp. T1-4]
gi|389837370|emb|CCI31777.1| Peptide chain release factor 2 [Microcystis sp. T1-4]
Length = 336
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/151 (64%), Positives = 130/151 (86%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP+L ++++ V+IP++DLEI+ +R+GGKGGQNVNKVETAVR+ H+PTG+ V
Sbjct: 175 QTSFAGVEVMPILGDDAVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KAL+ LKAKLL+IA EQ+A I +IRGD V+A WG QIRNYVFHPY+
Sbjct: 235 RCTQERSQLQNKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQ 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD+R+ ET+D+ VM+G+L+ FI++YL+
Sbjct: 295 LVKDLRSNVETTDVSGVMNGDLDSFIEAYLR 325
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 41 AADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTE-EMDSTDAGLLE 99
AA +FWDN AQ+TLQ L + K + + +++D I++L E E D T LLE
Sbjct: 2 AAVPTFWDNPDTAQKTLQELNECKSSLETYQGWCEQLEDTKAIIELLELESDRT---LLE 58
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EA + L LD++EL QLL+GPYD +GAV++I AGAGGTDAQ
Sbjct: 59 EATDNLTHLQHDLDRWELQQLLNGPYDAKGAVLTINAGAGGTDAQ 103
>gi|332707784|ref|ZP_08427811.1| bacterial peptide chain release factor 2 [Moorea producens 3L]
gi|332353487|gb|EGJ33000.1| bacterial peptide chain release factor 2 [Moorea producens 3L]
Length = 294
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/282 (46%), Positives = 177/282 (62%), Gaps = 15/282 (5%)
Query: 23 ASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLLTDFKTKM-D 78
A L QL KEL E++ S +D + A T+ A TD +D +LL T+ +
Sbjct: 23 AQTNLTQLNKELDRWELEQLLSGTYDAKG-AVLTINAGAGGTDAQDWADLLLRMYTRWAE 81
Query: 79 DAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGA 138
+ V L E +AG+ I L + + G + ++ I+
Sbjct: 82 NHGYKVHLAELSPGDEAGIKSATLEI-----DGLRAYGYLKAEKGTH----RLVRISPFN 132
Query: 139 GGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 198
QTSF+G EVMP + + +++++IPE+DLEI+ SRAGGKGGQNVNKVETAVRI HIP
Sbjct: 133 ANGKRQTSFAGVEVMPAV-DNTVELEIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHIP 191
Query: 199 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 258
TG+ VRCT+ERSQL NK KAL LKAKLLVIAEEQRA EI +IRGD V+A WG QIRNYV
Sbjct: 192 TGLAVRCTQERSQLQNKEKALVLLKAKLLVIAEEQRAQEIAEIRGDMVEAAWGNQIRNYV 251
Query: 259 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 300
FHPY++VKD+RT ET+ + V+DG L+ FI++YL+ + ++
Sbjct: 252 FHPYQMVKDLRTSVETTAVNDVLDGNLDLFIEAYLRQENQLT 293
>gi|443667516|ref|ZP_21133963.1| peptide chain release factor 2 [Microcystis aeruginosa DIANCHI905]
gi|159027417|emb|CAO86901.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443331007|gb|ELS45688.1| peptide chain release factor 2 [Microcystis aeruginosa DIANCHI905]
Length = 330
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/151 (64%), Positives = 129/151 (85%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP+L ++ + V+IP++DLEI+ +R+GGKGGQNVNKVETAVR+ H+PTG+ V
Sbjct: 175 QTSFAGVEVMPILGDDVVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KAL+ LKAKLL+IA EQ+A I +IRGD V+A WG QIRNYVFHPY+
Sbjct: 235 RCTQERSQLQNKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQ 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD+R+ ET+D+ VM+G+L+ FI++YL+
Sbjct: 295 LVKDLRSNVETTDVTGVMNGDLDSFIEAYLR 325
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 41 AADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEE 100
AA +FWDN AQ+TLQ L + K + + +++D I++L E +D LLEE
Sbjct: 2 AAVPTFWDNPDTAQKTLQELNECKSSLETYQSWCEQLEDTKAIIELLEL--ESDRALLEE 59
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
A I L LD++EL QLL+GPYD +GAV++I AGAGGTDAQ
Sbjct: 60 ATDNITHLQHDLDRWELQQLLNGPYDPKGAVLTINAGAGGTDAQ 103
>gi|33864328|ref|NP_895888.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
9313]
gi|33641108|emb|CAE22237.1| peptide-chain-release factor RF-2 [Prochlorococcus marinus str. MIT
9313]
Length = 375
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 99/151 (65%), Positives = 129/151 (85%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G E+MP + +E +++ IPE+DLE++ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 214 QTSFAGVEIMPKIDQE-VELDIPEKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KAL+ LKAKL+VIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 273 RCTQERSQLQNKEKALALLKAKLMVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT ET+D+ +VM+G+L+ FI++ L+
Sbjct: 333 MVKDLRTAEETTDVQAVMNGDLDRFIQTLLR 363
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 90/144 (62%), Gaps = 2/144 (1%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M D + ++D+ +DR+ + + + L +LE AA FW+++ AQ+ ++ L
Sbjct: 1 MLDLTDFKRDLSELTDRLGQAQDCLDVPALNARQQDLEQLAAQPDFWNDQQNAQKQMRQL 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+VK ++ +T +++ ++DA ++L + D +L EA S +K+L + LD++EL +L
Sbjct: 61 DEVKAQLTQITLWRSAVNDAQATLELYDL--EPDDEMLSEAQSGLKQLRQGLDRWELERL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
LSG YDKEGAV+SI AGAGGTDAQ
Sbjct: 119 LSGEYDKEGAVLSINAGAGGTDAQ 142
>gi|123965444|ref|YP_001010525.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
9515]
gi|123199810|gb|ABM71418.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
9515]
Length = 354
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/334 (40%), Positives = 189/334 (56%), Gaps = 73/334 (21%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA--------------- 80
ELE AA+ FW N+A A++ + L DV+D++ LL +K + DA
Sbjct: 17 ELEQIAAEPDFWINQAAAKKHMLNLDDVRDQLQLLDKWKILIADAEASLELYSLDPEEEM 76
Query: 81 -----VTIVKLTEEMDSTD-----AGLLEEAASIIKELNK------ALDQFE-LTQLLSG 123
+ +V L E +D + +G ++ ++I+ +N A D E L ++ S
Sbjct: 77 IVESHLGLVTLRENLDKWEFQRLLSGEYDKESAIVS-INAGAGGTDAQDWVEILLRMYSR 135
Query: 124 PYDKEGAVISITAGAGGTDA---------------------------------------Q 144
D G + IT + G +A Q
Sbjct: 136 WADNNGMSLEITDLSNGEEAGIKSVTFEVNGKYAYGYLQNEKGTHRLVRISPFNANGKRQ 195
Query: 145 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 204
TSF+G EVMP L ++S+ ++IP++DLEI+ SR+GG GGQNVNKVETAVRI H+P+G+ VR
Sbjct: 196 TSFAGVEVMPKL-DQSISLEIPDKDLEITTSRSGGAGGQNVNKVETAVRILHLPSGIAVR 254
Query: 205 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 264
CT+ERSQL NK KA+ LKAKLLVIA+EQRA+EI I+GD V+A WG QIRNYVFHPY++
Sbjct: 255 CTQERSQLQNKEKAMLLLKAKLLVIAKEQRAAEISDIKGDIVEAAWGNQIRNYVFHPYQM 314
Query: 265 VKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
VKD+RT ET+D+ V++G L+ FI L+ S
Sbjct: 315 VKDLRTMKETNDLDGVLNGGLDQFIHELLRMNIS 348
>gi|449015961|dbj|BAM79363.1| chloroplast peptide chain release factor RF-2 [Cyanidioschyzon
merolae strain 10D]
Length = 526
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/140 (65%), Positives = 113/140 (80%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EV+P+L +E ++QIP+ DLEI+ R+GG GGQNVNKVETAVRI HIPTGV+V
Sbjct: 349 QTSFAGVEVLPILEDEEEELQIPDSDLEITTMRSGGSGGQNVNKVETAVRIVHIPTGVSV 408
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RC+ ERSQ N+ K + LKAKLLVI EEQR+S ++IRG+AV+A WGQQIRNYV HPYK
Sbjct: 409 RCSSERSQSQNRTKGMQILKAKLLVIREEQRSSRWEEIRGEAVEAAWGQQIRNYVLHPYK 468
Query: 264 LVKDVRTGHETSDIVSVMDG 283
LVKD+R G ET ++ +DG
Sbjct: 469 LVKDLRNGWETGNVSDFLDG 488
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 30/170 (17%)
Query: 2 QDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALT 61
+ +LR+ V+ R E+ L+ K L ELE W++ EAQ L+AL
Sbjct: 100 HEVSSLRQSVQEQVHRTSEL---LDLEAQRKRLKELERATLSPEMWNDAKEAQRKLRALA 156
Query: 62 DVKDKINLLTDFKTKMDDAVTIVKLT-------EEMDST-DAG----------------- 96
K + + + DA ++V+L +E+ +T + G
Sbjct: 157 HQKALVERAERWLRAVADADSVVQLATATIEELQELPATHEPGTTGVQTSATANQDLDDV 216
Query: 97 --LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
LL + ++ + L FEL +L SG YD+ GA +++ AGAGGTDAQ
Sbjct: 217 RVLLHGTLAELERIASDLGSFELERLFSGQYDRFGARVTVQAGAGGTDAQ 266
>gi|303280341|ref|XP_003059463.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459299|gb|EEH56595.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 289
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/155 (58%), Positives = 119/155 (76%), Gaps = 10/155 (6%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ +VMP L E+ +E++ R+GG GGQNVNKVETAVR+ H+PTG+ V
Sbjct: 139 QTSFAAVDVMPTL----------EDKIEVTTMRSGGAGGQNVNKVETAVRMKHLPTGIVV 188
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RC EERSQ N+ KA++RLKAKL +AEE+R +++ +RGD VKAEWGQQIRNYVFHPYK
Sbjct: 189 RCEEERSQAMNRAKAIARLKAKLAAVAEERRLADVAAVRGDVVKAEWGQQIRNYVFHPYK 248
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKDVRTG ETSD+ VM+G+L+ F ++L+++ S
Sbjct: 249 MVKDVRTGMETSDVEGVMNGKLDEFQNAWLRWRAS 283
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L E + + L AL+ +E +LL G YD GA + I AGAGGTDAQ
Sbjct: 14 LASEVSDAVNALEGALEAWEARRLLGGTYDALGATVFIYAGAGGTDAQ 61
>gi|308804958|ref|XP_003079791.1| putative translation releasing factor2 (ISS) [Ostreococcus tauri]
gi|116058248|emb|CAL53437.1| putative translation releasing factor2 (ISS) [Ostreococcus tauri]
Length = 419
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 89/155 (57%), Positives = 121/155 (78%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ +V+PLL +E +V++PE DLEI+ R+ G GGQNVNK+ETAVRI H+PTG++V
Sbjct: 261 QTSFAAVDVIPLLQDED-EVKVPEGDLEITTMRSSGAGGQNVNKLETAVRIKHVPTGISV 319
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ E R+Q N+ A+ R+KAKL +AEE R ++I ++RGD VKAEWGQQIRNYV HPYK
Sbjct: 320 KAEEHRTQALNRQAAMLRIKAKLTALAEEARVADIAELRGDIVKAEWGQQIRNYVLHPYK 379
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKDVRTG ETSD+ V++G L+ ++ YL++K S
Sbjct: 380 MVKDVRTGVETSDVTRVLNGGLDEYMNGYLRWKAS 414
>gi|298706071|emb|CBJ29181.1| peptide chain release factor [Ectocarpus siliculosus]
Length = 789
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/153 (58%), Positives = 120/153 (78%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESM-DVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVT 202
QTSF+G E P++ ++ + D+ +PE +LE+S R+GG GGQNVNKVET VR+ HIPTG+
Sbjct: 302 QTSFAGVESFPIIEQDDLSDLVVPEGELEVSTMRSGGSGGQNVNKVETGVRMKHIPTGIA 361
Query: 203 VRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPY 262
VRCT+ERSQ+ NK AL+ LK KL+V+ +EQ+ ++ +IRGD V+A WGQQIRNYVFHPY
Sbjct: 362 VRCTQERSQMLNKELALNMLKEKLVVVMQEQQTRDLAEIRGDMVEASWGQQIRNYVFHPY 421
Query: 263 KLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
KLVKD RTG ET + VMDG+L+ I++YL++
Sbjct: 422 KLVKDTRTGAETVQVQDVMDGDLDALIEAYLRH 454
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 86/145 (59%), Gaps = 3/145 (2%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
D ++R+ + +A +R+ + R +LE EL LE ++++ FW++ A++TL L
Sbjct: 86 DVGDVRRGLSSARERLGKNRQLFDEAKLEGELEYLEGVSSEAEFWNDANSARKTLGDLNR 145
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTD---AGLLEEAASIIKELNKALDQFELTQ 119
+K +++ L ++ DA T+++L E + D +L+EA ++ L + LD +EL Q
Sbjct: 146 LKLQLDRLHRWRGWEADAETVIELCGEEEGGDEETVAMLDEAMEALQLLQRDLDAWELQQ 205
Query: 120 LLSGPYDKEGAVISITAGAGGTDAQ 144
LLSG YD G ++I AGAGGT+AQ
Sbjct: 206 LLSGKYDNCGCRLTIMAGAGGTEAQ 230
>gi|145347488|ref|XP_001418196.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578425|gb|ABO96489.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 278
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/155 (59%), Positives = 120/155 (77%), Gaps = 3/155 (1%)
Query: 144 QTSFSGAEVMPLLPEESMD--VQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGV 201
QTSF+ +V+PL EE M+ V++P+ DLE++ R+GG GGQNVNKVETAVRI HIPTG+
Sbjct: 120 QTSFAAVDVIPLF-EEDMEEVVKVPDTDLEVTTMRSGGAGGQNVNKVETAVRIKHIPTGI 178
Query: 202 TVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHP 261
TV+ E R+Q N+ A+ R+KAKL +AEE R ++I ++RGD VKAEWGQQIRNYV HP
Sbjct: 179 TVKAEEHRTQQLNRQAAMLRIKAKLTALAEEARVADIAELRGDIVKAEWGQQIRNYVLHP 238
Query: 262 YKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
YKLVKDVRTG ETSD V++G L+ ++ YL++K
Sbjct: 239 YKLVKDVRTGVETSDANKVLNGALDEYMNGYLRWK 273
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+L EA + ++ L+KALD +EL +LL G YD GAV+ I AGAGG DAQ
Sbjct: 1 MLREALTSVEALDKALDAWELRRLLGGKYDAFGAVLQIYAGAGGLDAQ 48
>gi|302390246|ref|YP_003826067.1| peptide chain release factor 2 (bRF-2) [Thermosediminibacter oceani
DSM 16646]
gi|302200874|gb|ADL08444.1| bacterial peptide chain release factor 2 (bRF-2)
[Thermosediminibacter oceani DSM 16646]
Length = 365
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/359 (33%), Positives = 188/359 (52%), Gaps = 73/359 (20%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R ++EA ++E+R + + +L+ E+A+LE K +FWD+ AQ+ LQ L +K+
Sbjct: 5 IRSEIEAFEPHIQEMRDALEIDRLKSEIAQLEEKTLTPNFWDDAQAAQKILQTLNQLKET 64
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ K K +D +T+++L ++ D GL E ++ +E K ++ L LL G YD
Sbjct: 65 VEKFEAIKKKWEDLMTLIELG--IEDHDEGLYGEISAEAEEFKKEFEEMRLKTLLRGRYD 122
Query: 127 KEGAVISITAGAGGTDAQ----------TSFS-----GAEVMPLLPEESMDVQ------- 164
K A++S+ AGAGGT+AQ T ++ +V+ +LP E ++
Sbjct: 123 KNNAILSLHAGAGGTEAQDWVQMLLRMYTRWAEDKGYKVKVLDMLPGEEAGIKSATILVE 182
Query: 165 --------------------------------------IP--EEDLEISFS--------- 175
IP E+D+E+
Sbjct: 183 GPYAYGYLKSEQGVHRLVRISPFDAAGRRHTSFASVDVIPEIEDDIEVEIKPEDLKIETF 242
Query: 176 RAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRA 235
R+GG GGQ VNK E+AVRITHIPTG+ V C ERSQ +N+ A+ L+AKL + E++
Sbjct: 243 RSGGAGGQYVNKTESAVRITHIPTGIVVTCQNERSQQSNRNTAMKLLRAKLFNLYLEEQQ 302
Query: 236 SEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+I ++RG+ + WG QIR+YVFHPY LVKD RT E ++ +VMDGE++ FI +YLK
Sbjct: 303 KKINELRGEQKEIAWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDMFINAYLK 361
>gi|449531735|ref|XP_004172841.1| PREDICTED: peptide chain release factor 2-like, partial [Cucumis
sativus]
Length = 204
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/128 (74%), Positives = 114/128 (89%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY LRK+VE S+RVEEIR SAGL QL++ELA+LE KAAD+SFWD+R++AQ+ L A+
Sbjct: 77 MQDFYTLRKEVETTSERVEEIRNSAGLLQLDQELADLESKAADNSFWDDRSKAQKVLMAM 136
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
TDVKDKI +LTDFKT++++A TIVKLTEEMDS D GLLEEA IIK+LNKALDQFEL++L
Sbjct: 137 TDVKDKIKMLTDFKTQVEEAETIVKLTEEMDSVDVGLLEEATKIIKDLNKALDQFELSEL 196
Query: 121 LSGPYDKE 128
LSGPYDKE
Sbjct: 197 LSGPYDKE 204
>gi|431795281|ref|YP_007222186.1| peptide chain release factor 2 (bRF-2) [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430785507|gb|AGA70790.1| bacterial peptide chain release factor 2 (bRF-2)
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 368
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 123/363 (33%), Positives = 186/363 (51%), Gaps = 74/363 (20%)
Query: 4 FYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDV 63
+ +K++E R+ ++R S + Q +++ LE++ FWD+ AQ+ +Q ++
Sbjct: 2 IFEWKKELENLETRLADLRDSLDVAQRTDKISVLEIELQRPDFWDHPESAQKVMQEISYH 61
Query: 64 KDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSG 123
++K+ T + ++DD +T+ +L ++ D L E +K L + L+ EL LLSG
Sbjct: 62 QEKLKTYTSLRQQLDDLLTLYQLA--VEENDESLEPEIEEGVKALQQVLEGLELEILLSG 119
Query: 124 PYDKEGAVISITAGAGGTDAQTSFS---------------GAEVMPLLPEE--------- 159
PYD+ A++++ AGAGGT+AQ S E M LLP +
Sbjct: 120 PYDRNNAILTLHAGAGGTEAQDWVSMLYRMYVRYGERHGYKVETMDLLPGDEAGIKSATL 179
Query: 160 -------------------------------------SMDV-----------QIPEEDLE 171
SMDV IP EDL+
Sbjct: 180 SISGENAYGYLKSEKGVHRLVRISPFDASGRRHTSFASMDVIPEVMDDGEEVPIPTEDLK 239
Query: 172 ISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAE 231
+ RA G GGQ+VNK +AVRITH+PTG+ V+ ERSQ+ N+ + L+AKLL +
Sbjct: 240 VDTYRASGAGGQHVNKTSSAVRITHLPTGIVVQSQSERSQIQNRAYCMRILQAKLLELKR 299
Query: 232 EQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKS 291
+Q+ EI +IRG+ + WG QIR+YVFHPY +VKD RT ETS+ +VMDGE++ FI S
Sbjct: 300 KQQEDEISEIRGEQQEIAWGSQIRSYVFHPYNMVKDHRTNEETSNTGAVMDGEIDQFIAS 359
Query: 292 YLK 294
YL+
Sbjct: 360 YLQ 362
>gi|219123603|ref|XP_002182112.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406713|gb|EEC46652.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 406
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/159 (57%), Positives = 120/159 (75%), Gaps = 6/159 (3%)
Query: 144 QTSFSGAEVMPLLPEESMD-----VQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 198
QT+F+G +V P + + D + +PE +LEI+ RAGGKGGQNVNKV +AVRI H+P
Sbjct: 236 QTTFAGVDVAPDILNQDDDAYWNTIDVPESELEITTMRAGGKGGQNVNKVNSAVRIKHLP 295
Query: 199 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 258
+G+ V+C +ERSQ NK AL RLKA+LL I +EQR +EIK+IRGD V+A WG QIRNYV
Sbjct: 296 SGLQVKCAQERSQSMNKNIALKRLKAQLLAIVQEQRVAEIKEIRGDMVEASWGAQIRNYV 355
Query: 259 FHPYKLVKDVRTGHETSDIVSVMDGE-LEPFIKSYLKYK 296
FHPYK+VKD RTG ETS++ + MDG+ LE I S+L++K
Sbjct: 356 FHPYKMVKDQRTGWETSNVQAFMDGDLLEECIGSFLRHK 394
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 80/144 (55%), Gaps = 10/144 (6%)
Query: 7 LRKDVEAASDRVEEIRASAG-LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD--V 63
+++D ++A++ + AS L L+ ++A+LE + + FWD EA + A+ + V
Sbjct: 23 VKRDFQSATELYRKNLASTTKLPALQSQIADLETEQSQPDFWD---EANTSRAAIVNAQV 79
Query: 64 KDKINLLTDFKTKMD---DAVTIVKLTEEMDSTD-AGLLEEAASIIKELNKALDQFELTQ 119
LLT + + DA +++ ++ S + A LL+E S I L + D+FEL
Sbjct: 80 STATRLLTRIQAWQEWHGDAQAALEILSQLASEERAMLLDEFRSAIARLREDSDRFELEL 139
Query: 120 LLSGPYDKEGAVISITAGAGGTDA 143
LLSGPYD A + +TAGAGGT+A
Sbjct: 140 LLSGPYDHAPARLLLTAGAGGTEA 163
>gi|284929451|ref|YP_003421973.1| peptide chain release factor 2 [cyanobacterium UCYN-A]
gi|284809895|gb|ADB95592.1| bacterial peptide chain release factor 2 (bRF-2) [cyanobacterium
UCYN-A]
Length = 344
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/150 (66%), Positives = 126/150 (84%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EVMP L + V+IP++DLEI+ +R+GGKGGQNVNKVETAVRI H+PTG++V
Sbjct: 188 QTSFTGIEVMPKLEGNDIKVEIPDKDLEITTTRSGGKGGQNVNKVETAVRIVHLPTGISV 247
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
RCT+ERSQL NK KAL LKAKLL+IA+EQRA +I +IRGD V+A WG QIR+YVFHPY+
Sbjct: 248 RCTQERSQLQNKEKALILLKAKLLIIAQEQRAKKIAEIRGDIVEAAWGNQIRSYVFHPYQ 307
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD+RT ET++I VMDG+L FI++YL
Sbjct: 308 MVKDLRTNVETTNINDVMDGDLGLFIEAYL 337
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 68/115 (59%), Gaps = 2/115 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L+ + +LE +FWDN AQ+ Q L++ K +++ + K++D I+ L
Sbjct: 4 LQASIKDLENTTIQPNFWDNPETAQKISQELSNFKSQLDQYHQWYNKLEDTKIIMDLL-- 61
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ D LLEEA + I +L K LD ++L QLLSG YD +GA+++I G GGTDAQ
Sbjct: 62 ILDNDKSLLEEAQNNITQLKKNLDNWDLQQLLSGTYDIKGAILNINTGVGGTDAQ 116
>gi|334342136|ref|YP_004547116.1| peptide chain release factor 2 [Desulfotomaculum ruminis DSM 2154]
gi|334093490|gb|AEG61830.1| Peptide chain release factor 2 [Desulfotomaculum ruminis DSM 2154]
Length = 368
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 123/363 (33%), Positives = 184/363 (50%), Gaps = 73/363 (20%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+D+E R++++R S + E+ +LE FWD E+Q Q L ++KDK
Sbjct: 5 IRRDLEQLGKRIQDLRVSLDIAGSRLEIEKLERGMMQEGFWDRPEESQRITQKLANLKDK 64
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
++ T+ + D I++L E + EE + + L K + EL LLSG YD
Sbjct: 65 VSAYTELEEASQDLEVILELCAEEEDPLL--EEELVTGFEALTKKVGDLELEVLLSGEYD 122
Query: 127 KEGAVISITAGAGGTDAQ----------TSFS-----GAEVMPLLPEE------------ 159
+ A++S+ AGAGGT++Q T ++ E++ LLP +
Sbjct: 123 RGSAILSLHAGAGGTESQDWVQMLLRMFTRYAENHQYKVEILDLLPGDEAGVKSVTFQVT 182
Query: 160 ----------------------------------SMDV-QIPEEDLEISFS--------- 175
S+DV + E++LE++
Sbjct: 183 GPNAYGYLRSEKGVHRLVRISPFDAAGRRHTSFASVDVLPVVEDELEVNIRPEDLKIDTY 242
Query: 176 RAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRA 235
R+GG GGQ+VNK ++AVRITH+PTG+ V C ERSQ N++ A+ LKAKL+ + ++
Sbjct: 243 RSGGAGGQHVNKTDSAVRITHLPTGLVVACQNERSQTYNRMAAMKLLKAKLIDLELRKKE 302
Query: 236 SEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
E+ +RGD WG QIR+YVFHPY LVKD RTG E ++ VMDGE++PFI +YLK
Sbjct: 303 EELAALRGDQKDIAWGSQIRSYVFHPYNLVKDHRTGVEVGNVHGVMDGEIDPFIAAYLKQ 362
Query: 296 KYS 298
K S
Sbjct: 363 KAS 365
>gi|297583381|ref|YP_003699161.1| hypothetical protein [Bacillus selenitireducens MLS10]
gi|297141838|gb|ADH98595.1| hypothetical protein Bsel_1077 [Bacillus selenitireducens MLS10]
Length = 366
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 182/360 (50%), Gaps = 75/360 (20%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
++ +V+ + R+ + R S L + E ++A LE + AD SFWDN+ EAQ+ + +K
Sbjct: 6 MKAEVQNMATRLADFRGSLDLDEKEAQIASLEDRMADPSFWDNQEEAQKVIGEANALKSY 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + + +D L EE D ++ + + I++L K L+QFEL LLSGPYD
Sbjct: 66 AHTYRELEAAHEDLEVQFGLLEE--ENDPEMMADLEAGIEDLQKRLNQFELQLLLSGPYD 123
Query: 127 KEGAVISITAGAGGTDAQ----------TSFS-----GAEVMPLLPEE-----SMDVQI- 165
A++ + GAGGT++Q T F+ E + LP + S+ +QI
Sbjct: 124 ANNAILELHPGAGGTESQDYASMLLRMYTRFAEQMNWKVETLDYLPGDEAGVKSVTLQIT 183
Query: 166 ---------------------------------------PE--EDLEI----------SF 174
PE ED+EI +F
Sbjct: 184 GHNAYGHLKAEKGVHRLVRISPFDSSGRRHTSFVSCDVMPELNEDIEIDVKPDELRIDTF 243
Query: 175 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 234
+G GGQ+VN ++AVR+TH+PT V C ERSQ+ N+ KA+ LKAKL + E++
Sbjct: 244 RSSGA-GGQHVNTTDSAVRMTHLPTNTIVSCQSERSQIKNREKAMKMLKAKLFQLEIERQ 302
Query: 235 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
E +IRG+ + WG QIR+YVFHPY +VKD RT ET + +VMDG+L PFI +YL+
Sbjct: 303 RQEADEIRGEQSEIGWGSQIRSYVFHPYNMVKDHRTNKETGNTQAVMDGDLMPFIDAYLR 362
>gi|15606882|ref|NP_214263.1| peptide chain release factor 2 [Aquifex aeolicus VF5]
gi|6225943|sp|O67695.1|RF2_AQUAE RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|2984119|gb|AAC07656.1| peptide chain release factor RF-2 [Aquifex aeolicus VF5]
Length = 373
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 121/359 (33%), Positives = 185/359 (51%), Gaps = 70/359 (19%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L+ VE R+E+++ ++LE EL EL+ K ++ +FW+++ +A++ +Q V++
Sbjct: 6 LKGKVEELRKRLEDVKKILSPEKLESELKELDQKMSEPNFWEDQEKAKQVIQRRKWVEET 65
Query: 67 INLLTDFKTKMDDAVTIVK--------------------------------LTEEMDSTD 94
+N L + + + D +V+ L+ EMD+ +
Sbjct: 66 LNKLKNLEKSVKDLEELVEITSEEDTETWAMMDEEIKEVERTLRELELKTYLSGEMDAKN 125
Query: 95 AGLLEEAASIIKELNKALDQF-----------------------------ELTQLLSGPY 125
A L +A + E D +T L+ GPY
Sbjct: 126 AYLTIQAGAGGTEACDWADMLFRMYKRWAEKKGYEVELIDITPDDVAGIKSVTVLVKGPY 185
Query: 126 ------DKEGA--VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRA 177
++G ++ I+ TSF+ VMP + +E + ++I EDL+I RA
Sbjct: 186 AYGYLKGEQGVHRLVRISPFDANARRHTSFAAVSVMPQI-DEDIKIEIKPEDLKIETFRA 244
Query: 178 GGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASE 237
G GGQ VNK +TAVRITHIPTG+TV C +ERSQ NK KAL LKAKL + ++ +
Sbjct: 245 SGAGGQYVNKTDTAVRITHIPTGITVSCQQERSQYQNKRKALELLKAKLYQLEMKKLEEK 304
Query: 238 IKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
KQ G+ WG QIR+YVFHPYKL+KD+RTG+ET ++ +VMDGE++ FI+SYLK+K
Sbjct: 305 KKQYEGEKTDIGWGHQIRSYVFHPYKLIKDLRTGYETGNVEAVMDGEIDEFIESYLKWK 363
>gi|224003217|ref|XP_002291280.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973056|gb|EED91387.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 343
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/141 (60%), Positives = 112/141 (79%), Gaps = 1/141 (0%)
Query: 144 QTSFSGAEVMPLLPEESM-DVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVT 202
QT+F+G +V+PLL E ++ ++ IPE++LEI+ R+GGKGGQNVNKVET VR+ HIP+G+
Sbjct: 203 QTTFAGVDVIPLLEEGTVSEIDIPEKELEITTMRSGGKGGQNVNKVETGVRVKHIPSGIA 262
Query: 203 VRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPY 262
++CT+ERSQ NK AL+RLK +LLVIA+EQ+ I IRGD V+A WG QIRNYV PY
Sbjct: 263 IKCTQERSQSQNKQIALTRLKGQLLVIAQEQQLQSINAIRGDIVEASWGAQIRNYVMQPY 322
Query: 263 KLVKDVRTGHETSDIVSVMDG 283
K+VKD R+G ETSD+ V+DG
Sbjct: 323 KMVKDARSGWETSDVEGVLDG 343
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 34/161 (21%)
Query: 30 LEKELAELEMKAADSSFWD----NRAEAQETLQALTDVKDKINLLTDFKTKMD------- 78
++ L +LE + + SFWD +R+E V +I T K +M+
Sbjct: 1 IQSRLQDLETETSSPSFWDASNSDRSEV---------VTREIGRYTRLKGEMEGWERLRG 51
Query: 79 DAVTIVKLTEE-MDSTDAG-------------LLEEAASIIKELNKALDQFELTQLLSGP 124
DA+ ++L ++ +D + G EE S ++L + ++EL LLSGP
Sbjct: 52 DALGALELLQDLLDGSSGGDNFEEDEDEMILLTFEECQSSAQKLLEQSQKYELQTLLSGP 111
Query: 125 YDKEGAVISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQI 165
YD + +TAGAGGT+A S M + + MD ++
Sbjct: 112 YDSAQCTLQLTAGAGGTEACDWVSMLYRMYMRHAQFMDYKV 152
>gi|237755833|ref|ZP_04584431.1| peptide chain release factor 2 [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691998|gb|EEP61008.1| peptide chain release factor 2 [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 369
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 182/339 (53%), Gaps = 71/339 (20%)
Query: 28 QQLEKELAELEMKAADSSFWDNRAEAQET----------LQALTDVKDKINLLTDFKT-- 75
++LE+E+ +L+ AD +FW++ +AQE L+ + V +KIN L D+ T
Sbjct: 27 EKLEEEIKQLDDLMADPNFWNDTKKAQEISSRRNYLGEKLEEILTVDEKINNLLDYITLL 86
Query: 76 KMDDAVTIVK---------------------LTEEMDSTDAGLLEEAAS----------- 103
+M++ + L++EMDS +A L +A S
Sbjct: 87 EMEEDQELYNEVEKELKEIEKEISRLELGSLLSDEMDSKNAILTVQAGSGGVEACDWTEM 146
Query: 104 ----IIKELNKALDQFEL--------------TQLLSGPY------DKEGA--VISITAG 137
+ K Q EL T ++ GPY ++G ++ I+
Sbjct: 147 LLRMYTRWAEKRGYQVELVDFQPDDVAGVKSATVIIKGPYAYGYLKGEQGVHRLVRISPF 206
Query: 138 AGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 197
TSFS V+P + +E + V+I EEDL I RAGG GGQ+VNK ++AVRITHI
Sbjct: 207 DANKRRHTSFSAVSVIPEI-DEDIKVEINEEDLRIDTYRAGGAGGQHVNKTDSAVRITHI 265
Query: 198 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 257
PTG+ V C ERSQL NK+KA++ LKAKL + E+R + K++ G+ WG QIR+Y
Sbjct: 266 PTGIVVACQSERSQLQNKLKAMNMLKAKLYQLELEKRKEKQKELEGEKKDITWGSQIRSY 325
Query: 258 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
VF PY++VKD+RTG ET +I +VMDGE++ FI+SYLK+K
Sbjct: 326 VFQPYQMVKDLRTGFETGNIEAVMDGEIDDFIESYLKWK 364
>gi|147679087|ref|YP_001213302.1| protein chain release factor B [Pelotomaculum thermopropionicum SI]
gi|146275184|dbj|BAF60933.1| protein chain release factor B [Pelotomaculum thermopropionicum SI]
Length = 336
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 177/331 (53%), Gaps = 77/331 (23%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDD-AVTIVKLTEEMDSTDA 95
LE + + FWD + +AQ+ +Q L+ ++D++ + ++D V EE D A
Sbjct: 2 LERQMLEPGFWDGQEKAQKAVQRLSSLRDRVAVFQRLDKDLEDLEVLAELGEEEEDEAAA 61
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ----------T 145
+++ +++ + + + ELT LLSGPYD+ A++++ AGAGGT+AQ T
Sbjct: 62 AEVKQGLAVVAQ---KVAEMELTVLLSGPYDRGNAIVALHAGAGGTEAQDWVEMLLRMYT 118
Query: 146 SFS-----GAEVMPLLPEE----------------------------------------- 159
++ EV+ LLP +
Sbjct: 119 RWAERRGFKVEVLDLLPGDEAGTKSATIEVIGPNAYGYLRSEKGVHRLVRISPFDAAGRR 178
Query: 160 -----SMDVQIPEED-----------LEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
S+DV +PE D L+I R+GG GGQ+VNK ++AVRITH+PTG+ V
Sbjct: 179 HTSFASVDV-LPEVDDEVDVKINPDDLKIDTFRSGGAGGQHVNKTDSAVRITHLPTGIVV 237
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQLAN++ A+ LKA+L+ + ++ +E+ +RG+ + WG QIR+YVFHPY
Sbjct: 238 TCQNERSQLANRLAAMKMLKARLIDLELRKKEAELAALRGEQQEIAWGSQIRSYVFHPYS 297
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RTGHET ++ +VMDGE++ FI +YL+
Sbjct: 298 LVKDHRTGHETGNVGAVMDGEIDSFIAAYLR 328
>gi|188997267|ref|YP_001931518.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1]
gi|229576671|sp|B2V5M0.1|RF2_SULSY RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|188932334|gb|ACD66964.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1]
Length = 369
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 122/339 (35%), Positives = 179/339 (52%), Gaps = 71/339 (20%)
Query: 28 QQLEKELAELEMKAADSSFWDNRAEAQET----------LQALTDVKDKINLLTDFKT-- 75
++LE+E+ +L+ AD +FW++ +AQE L+ + V K+N L D+ T
Sbjct: 27 EKLEEEIKQLDDLMADPNFWNDTKKAQEISSRRNYLGEKLEEILTVDKKVNNLLDYITLL 86
Query: 76 KMDDAVTIVK---------------------LTEEMDSTDAGLLEEAAS----------- 103
+M++ + L++EMDS +A L +A S
Sbjct: 87 EMEEDQELYNEVEKELKEIEKEISRLELGSLLSDEMDSKNAILTVQAGSGGVEACDWTEM 146
Query: 104 ----IIKELNKALDQFEL--------------TQLLSGPY------DKEGA--VISITAG 137
+ K Q EL T ++ GPY ++G ++ I+
Sbjct: 147 LLRMYTRWAEKRGYQVELVDFQPDDVAGVKSATLIIKGPYAYGYLKGEQGVHRLVRISPF 206
Query: 138 AGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 197
TSFS V+P + +E + V+I EEDL I RA G GGQ+VNK ++AVRITHI
Sbjct: 207 DANKRRHTSFSAVSVIPEI-DEDIKVEINEEDLRIDTYRASGAGGQHVNKTDSAVRITHI 265
Query: 198 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 257
PTG+ V C ERSQL NK+KA + LKAKL + E+R + K++ G+ WG QIR+Y
Sbjct: 266 PTGIVVACQSERSQLQNKLKATNMLKAKLYQLELEKRKEKQKELEGEKKDITWGSQIRSY 325
Query: 258 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
VF PY++VKD+RTG ET +I +VMDGE++ FI+SYLK+K
Sbjct: 326 VFQPYQMVKDLRTGFETGNIEAVMDGEIDDFIESYLKWK 364
>gi|354558919|ref|ZP_08978172.1| Peptide chain release factor 2 [Desulfitobacterium metallireducens
DSM 15288]
gi|353545243|gb|EHC14695.1| Peptide chain release factor 2 [Desulfitobacterium metallireducens
DSM 15288]
Length = 332
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/323 (35%), Positives = 165/323 (51%), Gaps = 78/323 (24%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL-TEEMDSTDAGLLEEAASI 104
FWD+ AQ+ +Q L + K+ + D K +D + +L TEE D++ L E +
Sbjct: 8 FWDDPDSAQKVMQELGFQQAKVKMYEDLHAKFEDLTVLYELATEEEDNS---LETEVETE 64
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQTSFS---------------G 149
+KEL ++ EL LLS PYD+ ++++ AGAGGT+AQ S
Sbjct: 65 VKELQGIFEKLELEILLSNPYDQNNTILTLHAGAGGTEAQDWVSMLYRMYVRWGERRGYK 124
Query: 150 AEVMPLLPEE----------------------------------------------SMDV 163
E M LLP + S+DV
Sbjct: 125 VETMDLLPGDEAGIKSATISIAGENAYGYAKSEKGVHRLVRISPFDAAGRRHTSFASVDV 184
Query: 164 QIPE------------EDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQ 211
IPE ++L++ RA G GGQ++NK +AVRITH+PTG+ V C ERSQ
Sbjct: 185 -IPEVEEDDSEIMINPDELKVDTYRASGAGGQHINKTSSAVRITHLPTGIVVACQSERSQ 243
Query: 212 LANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTG 271
+ N+ + LKAKLL + +Q+A EI +IRG+ + WG QIR+YVFHPY +VKD RT
Sbjct: 244 IQNRAYVMRVLKAKLLELKRQQQADEISEIRGEQQEIAWGSQIRSYVFHPYNMVKDHRTN 303
Query: 272 HETSDIVSVMDGELEPFIKSYLK 294
ET+++ +VMDGE++ FI +YL+
Sbjct: 304 VETANVAAVMDGEIDEFIAAYLQ 326
>gi|289549137|ref|YP_003474125.1| peptide chain release factor 2 [Thermocrinis albus DSM 14484]
gi|289182754|gb|ADC89998.1| peptide chain release factor 2 [Thermocrinis albus DSM 14484]
Length = 372
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/367 (32%), Positives = 194/367 (52%), Gaps = 70/367 (19%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQ-------- 58
+R +E ++R EE++ S L +++EL EL+ A S W+ + +A++ LQ
Sbjct: 5 IRTKLEELTERFEEVKESLKLDSMKEELKELDNLMASSHIWNQQEKAKKILQRRKWLEEN 64
Query: 59 ---------ALTDVKDKINLL--------TDFKTKMDDAVTIVK-------LTEEMDSTD 94
L+D+++ +++ T K +++ A ++K L+ EMD+ +
Sbjct: 65 IQQLEATEKVLSDIRELLHITEEEDLETQTLLKEELEKAEQMIKDMEIRAFLSGEMDAKN 124
Query: 95 AGLLEEAAS-----------IIKELNKALDQ--FEL----------------TQLLSGPY 125
A L +A + +++ + ++ +E+ T L+ GPY
Sbjct: 125 AYLTIQAGAGGVEACDWAQMLLRMYRRWAEKHGYEVEVVDITPDDVAGIKSATLLIKGPY 184
Query: 126 -----DKEGAV---ISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRA 177
E V + I+ TSF+ V+P + +ES++++I EED+E+ RA
Sbjct: 185 AYGYLKGESGVHRLVRISPFDANARRHTSFASVTVVPQI-DESINIEIREEDIEMETFRA 243
Query: 178 GGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASE 237
G GGQ VNK +TAVRI H PTG+ V C +ERSQ N++KAL LKAKL + ++ +
Sbjct: 244 SGAGGQYVNKTDTAVRIRHKPTGIVVTCQQERSQYQNRMKALELLKAKLYQLKLQELEEK 303
Query: 238 IKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKY 297
+ + G+ + WG QIR+YVF PY+LVKD+RTG E D+ SVMDGE++PFI++YL++K
Sbjct: 304 KRALEGEKTEIGWGHQIRSYVFQPYQLVKDLRTGVEIGDVESVMDGEIDPFIEAYLRWKA 363
Query: 298 SMSLSAS 304
AS
Sbjct: 364 KQEAQAS 370
>gi|397690960|ref|YP_006528214.1| peptide chain release factor 2 [Melioribacter roseus P3M]
gi|395812452|gb|AFN75201.1| peptide chain release factor 2 [Melioribacter roseus P3M]
Length = 329
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/150 (57%), Positives = 108/150 (72%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V+P + ++S+D++I DL I R+GGKGGQNVNKVETAVRITHIPTGV
Sbjct: 175 HTSFASVFVIPEV-DDSIDIEINPADLRIDTYRSGGKGGQNVNKVETAVRITHIPTGVVA 233
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQL NK A+ LK+KL + E++ +E+ +I + +K EWG QIR+YVFHPY
Sbjct: 234 ACQSERSQLQNKTNAMKLLKSKLYQLELEKQQAELNEIEKNKMKIEWGSQIRSYVFHPYN 293
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKD RTG+ETSD SVMDG + FIK YL
Sbjct: 294 LVKDHRTGYETSDTQSVMDGNINEFIKQYL 323
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW ++ AQ LQ +++ ++L + K K+D V+L + + D + E +
Sbjct: 7 FWSDQKRAQSLLQKSKSLQNWVDLWNELKEKVDHIEEFVELVKAEE--DESFITEIDKEL 64
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E K + EL +LSG D + +++I +GAGGT+AQ
Sbjct: 65 TEAEKLYSELELKSMLSGKDDDKNCILTIHSGAGGTEAQ 103
>gi|336429368|ref|ZP_08609334.1| peptide chain release factor 2 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336002679|gb|EGN32781.1| peptide chain release factor 2 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 334
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 80/152 (52%), Positives = 110/152 (72%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF +VMP + EE +D++I EEDL I R+ G GGQ++NK +A+RITH+PTG+ V
Sbjct: 174 QTSFVSLDVMPDI-EEDLDIEINEEDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK KA+ LKAKL ++ +E+ A ++ IRG+ + WG QIR+YVF PY
Sbjct: 233 QCQNERSQFQNKDKAMQMLKAKLYMLRQEENAQKLSGIRGEVKEIGWGNQIRSYVFQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
+VKD RT HET ++ +VMDG L+PFI +YLK+
Sbjct: 293 MVKDHRTNHETGNVDAVMDGALDPFINAYLKW 324
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWDN + + ++ L ++KD + + T+ +D T++++ E D D + EE S +
Sbjct: 6 FWDNPEYSNKKMKELKNLKDTVEQIEHLSTQYEDIETLIEMGNEED--DESMAEEIRSEL 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
L+ ++ LL+G YDK GA++ + AGAGGT++
Sbjct: 64 DSFTDELETLRISTLLTGEYDKNGAILKLNAGAGGTES 101
>gi|297618035|ref|YP_003703194.1| hypothetical protein Slip_1875 [Syntrophothermus lipocalidus DSM
12680]
gi|297145872|gb|ADI02629.1| hypothetical protein Slip_1875 [Syntrophothermus lipocalidus DSM
12680]
Length = 371
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 184/356 (51%), Gaps = 73/356 (20%)
Query: 17 RVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTK 76
R+EEI S ++ L+ + +LE K FWD+ EAQ+ ++ ++ +K++++ +
Sbjct: 16 RLEEIGGSLDVEGLKHRIKKLEDKTCQPGFWDDNQEAQKVVKEMSGLKERVDSYESLVRE 75
Query: 77 MDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITA 136
++D +++L E + + EAA+ + LN+ ++EL+ + G +D A++S+ A
Sbjct: 76 IEDISALLELAEAEEDEEL--YREAAAELARLNRRFREYELSIMFKGEHDDSNAIVSLHA 133
Query: 137 GAGGTDAQTSF-------------SGAEV--MPLLPEESMDVQ----------------- 164
GAGGTDAQ +G EV M LP E ++
Sbjct: 134 GAGGTDAQDWVEMLLRMYTRWAEDNGYEVDIMDYLPGEEAGIKSVTLLIKGKYAYGKMRA 193
Query: 165 ----------------------------IPE--EDLEISFS---------RAGGKGGQNV 185
+PE +D+E++ S RAGG GGQ+V
Sbjct: 194 EAGVHRLIRVSPFDASGRRHTSFALVSVLPEIQDDVEVTISSDDLRIDTFRAGGAGGQHV 253
Query: 186 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 245
NK ++AVRITH+P+G+ V+C ERSQ ANK+ A+ L+AKL + + ++ +++++G+
Sbjct: 254 NKTDSAVRITHLPSGIVVQCQNERSQYANKLAAMKILRAKLYELKQREQEESLQKLKGEY 313
Query: 246 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSL 301
+ WG QIR YV +P+ LVKD RTG E ++ +V+DG++ FI +YL KY +
Sbjct: 314 KEIAWGNQIRTYVLNPFSLVKDHRTGLEVGNVNAVLDGDINDFITAYLGQKYGAGI 369
>gi|317121051|ref|YP_004101054.1| peptide chain release factor 2 (bRF-2) [Thermaerobacter marianensis
DSM 12885]
gi|315591031|gb|ADU50327.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter
marianensis DSM 12885]
Length = 416
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/363 (33%), Positives = 171/363 (47%), Gaps = 77/363 (21%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L + + A R+EE+R L +E+ +E D SFWD AQ+ ++ L +K
Sbjct: 5 LLRRIRALRPRLEELRDDLDLAGKRREIERIEQAMTDPSFWDEPDRAQQQVRQLKVLKGP 64
Query: 67 INLLTDFKTKMDDAVTIVKLT-EEMDSTDAGLLEEAASIIKE----------LNKALD-- 113
+ + ++DD + +L EE D + LEE + +E LN D
Sbjct: 65 VEHYEALERQLDDLQVLAELAAEEADVSVIPELEEGIAKAEEGLRQLELDLLLNGPYDGY 124
Query: 114 -----------------------------------QFELTQLLSGPYDKEGAVISITAGA 138
Q E+ LL G +E + S+T
Sbjct: 125 DAIVSLHPGAGGTESQDWAQMLWRMYTRWAEDHGYQVEVLDLLEG---EEAGIKSVTFAV 181
Query: 139 GGTDA-------------------------QTSFSGAEVMPLLPEESMDVQIPEEDLEIS 173
G +A TSF+ +V+P L +S +++I EDL I
Sbjct: 182 RGPNAYGYLRSEHGVHRLVRISPFDAAGRRHTSFASVDVLPDL-GDSPEIEIRPEDLRID 240
Query: 174 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 233
RAGG GGQ+VNK E+AVRI H+PTG+ C ERSQ AN+ A+ LKA+L EEQ
Sbjct: 241 VFRAGGHGGQHVNKTESAVRIVHLPTGIVATCQNERSQHANRETAMKILKARLARYYEEQ 300
Query: 234 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
R EI +RGD + WG QIR+YVF PY LVKD RTG E ++ +VMDG L+PFI +YL
Sbjct: 301 RLKEIAALRGDVGEIAWGNQIRSYVFQPYTLVKDHRTGVEVGNVQAVMDGHLDPFINAYL 360
Query: 294 KYK 296
+++
Sbjct: 361 RWE 363
>gi|260584689|ref|ZP_05852435.1| peptide chain release factor 2 [Granulicatella elegans ATCC 700633]
gi|260157712|gb|EEW92782.1| peptide chain release factor 2 [Granulicatella elegans ATCC 700633]
Length = 331
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/155 (51%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF ++MP L E +D++I +DL+I RA G GGQ++NK +AVRITHIPTG+
Sbjct: 174 HTSFCSIDIMPQL-EGDIDIEINPDDLKIDVYRASGAGGQHINKTSSAVRITHIPTGIVT 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ +RSQ NK +A++ LK KL + EE++A+E+ +IRG+ WG QIRNYVFHPY
Sbjct: 233 QSQAQRSQFKNKDQAMAMLKTKLYQLEEEKKAAELAEIRGEQKDIAWGSQIRNYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKD+R+GHET +I +VMDG+L+PF+ +YLK+ S
Sbjct: 293 LVKDLRSGHETGNIGAVMDGDLDPFMDAYLKWTLS 327
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
++ FWD+ +AQ +Q ++K + + ++++ + ++ +E + + +E
Sbjct: 2 SEPGFWDDNEKAQMVIQKSNELKAVYDTFHQLELQVEEVELLFEMYKE--DPEEEIHDEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ + K L+++EL+ LLSGP+DK A++ I GAGGT++Q
Sbjct: 60 VERVHSVEKELEKYELSMLLSGPHDKCSAILEIHPGAGGTESQ 102
>gi|375089821|ref|ZP_09736146.1| peptide chain release factor 2 [Facklamia languida CCUG 37842]
gi|374566668|gb|EHR37907.1| peptide chain release factor 2 [Facklamia languida CCUG 37842]
Length = 355
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 177/340 (52%), Gaps = 71/340 (20%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
+ Q++ +LAE E+ + FWD++ +AQ ++ D+K+++N + K++D +V+L
Sbjct: 10 IDQMKADLAENELAMNEPGFWDDQQKAQAVIKTSNDLKERLNTFFQIEQKLEDMQVVVEL 69
Query: 87 --------------------TEEMDSTDAGLL----EEAASIIKELNKALDQFE---LTQ 119
++E++S LL ++A+ I E++ E +
Sbjct: 70 YEETEDQSLWEELQTLQTTFSQELESYQLSLLLSQAHDSANAIIEIHPGAGGTESQDWGE 129
Query: 120 LLSGPYDK------------------EGAVISITAGAGGTDA------------------ 143
+L YD+ E + S+T G
Sbjct: 130 MLLRMYDRWAHQKGYQVKVIDYQNGEEAGIKSVTLEVAGNKVYGHLKSEKGVHRLIRISP 189
Query: 144 -------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITH 196
TSF +V PL+ ++S++V+I +DL I RA G GGQ++NK +AVRITH
Sbjct: 190 FDSNGKRHTSFCSIDVTPLI-DDSIEVEINPDDLRIDTYRASGAGGQHINKTSSAVRITH 248
Query: 197 IPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRN 256
+PTG+ + +RSQ+ NK +A++ LKAKL + EE++ E+ I+GD ++ WG QIR+
Sbjct: 249 LPTGIVTQSQSQRSQIHNKDQAMNLLKAKLYQLEEERKQKELAAIKGDQLENAWGSQIRS 308
Query: 257 YVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
YVFHPY +VKD RTG+ET + +V+DGE++ FI +YLK++
Sbjct: 309 YVFHPYSMVKDHRTGYETGNAEAVLDGEIDGFIDAYLKWQ 348
>gi|312130867|ref|YP_003998207.1| peptide chain release factor 2 [Leadbetterella byssophila DSM
17132]
gi|311907413|gb|ADQ17854.1| bacterial peptide chain release factor 2 (bRF-2) [Leadbetterella
byssophila DSM 17132]
Length = 358
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 108/150 (72%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ PL+ +++++V++ + D+E SR+GG GGQNVNKVET V++TH PTG+ +
Sbjct: 207 HTSFASVYAYPLV-DDTIEVEVKDADIEWQTSRSGGAGGQNVNKVETKVQLTHKPTGIVI 265
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQLANK A++ LK++L I E+R + I K EWG QIRNYVFHPYK
Sbjct: 266 VCQIERSQLANKEHAMNMLKSRLYQIELEKRNAARADIEASKKKIEWGSQIRNYVFHPYK 325
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKD RTGHETSDI VMDGE++ FIK+YL
Sbjct: 326 LVKDARTGHETSDIQRVMDGEIDDFIKAYL 355
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 9 KDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKIN 68
KD+ A RV +R +++L +LE + A FW++ AQ ++ + +K+
Sbjct: 7 KDLRA---RVTALRGIFDYDNRKEKLGDLENQQAQPEFWNDSDHAQTVVKEIQVLKNWTE 63
Query: 69 LLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKE 128
+ + + D T+ + +E + + + EA ++ +++ EL ++LS D+
Sbjct: 64 AYEEAEASISDLETLFEFYQEGEVEEEEVDTEAKKTVQ----IIEELELKKMLSSEEDQF 119
Query: 129 GAVISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDL 170
A+I I +GAGGT++Q S M L+ + ++ + D
Sbjct: 120 SAIIEINSGAGGTESQDWASMLYRMYLMWAQKHGYKVTQVDW 161
>gi|163783151|ref|ZP_02178145.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881485|gb|EDP74995.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
Length = 367
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 181/359 (50%), Gaps = 70/359 (19%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L+ +E +R E IR + +L++EL +++ + FWD++ +A++ +Q +++
Sbjct: 4 LKSKIEELKERFEGIRKVLDIDRLKEELRKMDETMSAQGFWDDQEKAKKVIQKRKWLEET 63
Query: 67 INLLTDFKTKMDDAVTIVK--------------------------------LTEEMDSTD 94
+N + + + D + + L+ EMDS +
Sbjct: 64 VNSIETLEKSLRDVEELSQTTPEEDTDTWAILEEEMESLEDKLKELELKTYLSGEMDSKN 123
Query: 95 AGLLEEAASIIKELNKALDQF-----------------------------ELTQLLSGPY 125
A L +A + E D +T L+ GPY
Sbjct: 124 AYLTIQAGAGGTEACDWADMLYRMYRRWAERKGYDVEVVDITPDDVAGIKSVTLLVKGPY 183
Query: 126 ------DKEGA--VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRA 177
++G ++ I+ TSF+ VMP + +E +++++ +EDL+I RA
Sbjct: 184 AYGYLRGEQGVHRLVRISPFDSNARRHTSFAAVSVMPQI-DEDINIEVRDEDLKIETFRA 242
Query: 178 GGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASE 237
G GGQ VNK +TAVR+THIPTG+ V C +ERSQ N+ KAL LKAKL + +++ +
Sbjct: 243 SGAGGQYVNKTDTAVRLTHIPTGIVVSCQQERSQFQNRRKALELLKAKLYQLEQQKLMEK 302
Query: 238 IKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
KQ G+ WG QIR+YVFHPY+LVKD+RTG+ET ++ +VMDG+++ FI+ +LK++
Sbjct: 303 RKQYEGEKTDIGWGHQIRSYVFHPYRLVKDLRTGYETGNVDAVMDGDIDQFIEGFLKWQ 361
>gi|410659494|ref|YP_006911865.1| Peptide chain release factor 2; programmed frameshift-containing
[Dehalobacter sp. DCA]
gi|410662472|ref|YP_006914843.1| Peptide chain release factor 2; programmed frameshift-containing
[Dehalobacter sp. CF]
gi|409021849|gb|AFV03880.1| Peptide chain release factor 2; programmed frameshift-containing
[Dehalobacter sp. DCA]
gi|409024828|gb|AFV06858.1| Peptide chain release factor 2; programmed frameshift-containing
[Dehalobacter sp. CF]
Length = 314
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 157/310 (50%), Gaps = 75/310 (24%)
Query: 57 LQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFE 116
+Q LT KDK+ + + +++D + +L E D D L E + I +L E
Sbjct: 1 MQELTREKDKVTVHQQLQDQIEDIAALWELAVEED--DISLESEIENTIVKLKNQFADLE 58
Query: 117 LTQLLSGPYDKEGAVISITAGAGGTDAQTSFS---------------GAEVMPLLPEE-- 159
L LLSGPYD A+I++ +GAGGT++Q E + LLP E
Sbjct: 59 LEILLSGPYDSNNAIITLHSGAGGTESQDWVQMLYRMYVRWGERRGFKVETLDLLPGEEA 118
Query: 160 --------------------------------------------SMDVQIPE--EDLEIS 173
S+DV IPE +D EI+
Sbjct: 119 GIKSVTFSLAGENAYGYAKCEKGVHRLVRISPFDASGRRHTSFASVDV-IPEVTDDAEIT 177
Query: 174 FS---------RAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKA 224
R+GG GGQ+VNK ++AVRITH+PTG+ V+C ERSQ+ N+ + L+A
Sbjct: 178 IDAEDLKVDTYRSGGAGGQHVNKTDSAVRITHLPTGIIVQCQSERSQIQNRAYCMRVLQA 237
Query: 225 KLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGE 284
KLL + +Q+ EI ++RG+ WG QIR+YVFHPY +VKD RT +ET ++ +VMDGE
Sbjct: 238 KLLELKRKQQEEEISEVRGEQNDIAWGSQIRSYVFHPYSMVKDHRTSYETGNVNAVMDGE 297
Query: 285 LEPFIKSYLK 294
++P++ +YL+
Sbjct: 298 IDPYVTAYLQ 307
>gi|163784774|ref|ZP_02179571.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
gi|159879956|gb|EDP73663.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
Length = 348
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 127/189 (67%), Gaps = 9/189 (4%)
Query: 118 TQLLSGPY------DKEGA--VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEED 169
T ++ GPY ++G ++ I+ TSF+ V+P + EE + V+I E+D
Sbjct: 156 TFIVKGPYAYGYLQGEQGVHRLVRISPFDSNKRRHTSFAAVSVIPEIGEE-IKVEINEDD 214
Query: 170 LEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVI 229
L I RA G GGQ+VNK ++AVRITHIPTG+ V C ERSQ+ N+ KA+ LKAKL +
Sbjct: 215 LRIDTFRASGAGGQHVNKTDSAVRITHIPTGIVVSCQSERSQIQNRAKAMQMLKAKLYQL 274
Query: 230 AEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFI 289
E++ + K++ G+ + WG QIR+YVFHPY++VKD+RTG+ET +I +VMDGE++ F+
Sbjct: 275 EIEKQKEKRKELEGEKKEISWGSQIRSYVFHPYQMVKDLRTGYETGNIQAVMDGEIDSFM 334
Query: 290 KSYLKYKYS 298
++YLKYK S
Sbjct: 335 ETYLKYKVS 343
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L+ ++++L EL+ + FW+++ +AQ+ T + DK+ L + + K++ ++L
Sbjct: 3 LEDIKQKLKELDEIMSSPDFWNDQKKAQKISAERTYLSDKLEKLNNIEEKINYLEEYIEL 62
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
E +A ++ + IK L +++FE+ LLSG YD + A++S+ AG+GG +A
Sbjct: 63 LELEPDEEAK--QDLENEIKNLETLINKFEVESLLSGEYDSKNAIVSVQAGSGGVEA 117
>gi|317130277|ref|YP_004096559.1| hypothetical protein Bcell_3587 [Bacillus cellulosilyticus DSM
2522]
gi|315475225|gb|ADU31828.1| hypothetical protein Bcell_3587 [Bacillus cellulosilyticus DSM
2522]
Length = 366
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/361 (32%), Positives = 181/361 (50%), Gaps = 73/361 (20%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETL---QALTDV 63
+++++ A + R+ + R S L++ E +AELE +D SFWDN+ AQ+ + AL ++
Sbjct: 6 IKQELAAMAKRLNDFRGSLDLEEKETRIAELEELMSDPSFWDNQDNAQKIISENNALKEM 65
Query: 64 KDKINLLTDFKTKMDDAVTIVK------------------------------LTEEMDST 93
D L + +D + +VK L+E D
Sbjct: 66 VDTYRELEAEQEDLDVSYELVKEEGDEELAADLHAGIKELGKKFNDFELQLLLSEPYDKN 125
Query: 94 DAGL-----------LEEAASIIKELNKALDQ--FELTQLLSGPYDKEGAVISITAGAGG 140
+A L + A+ +++ + D F++ L P D E V S+T G
Sbjct: 126 NAILELHPGAGGTESQDWASMLLRMYQRWADDKGFKVETLDYLPGD-EAGVKSVTLMISG 184
Query: 141 TDA-------------------------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFS 175
+A TSF EVMP L +++++++I + L+I
Sbjct: 185 HNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVMPEL-DDNVEIEISPDQLKIDTY 243
Query: 176 RAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRA 235
RA G GGQ++N ++AVRITH+PT V C ERSQ+ N+ +A+ LKAKL + E++
Sbjct: 244 RASGAGGQHINTTDSAVRITHLPTNTVVTCQSERSQIKNREQAMKMLKAKLFQLEIERQQ 303
Query: 236 SEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
E+ +IRG+ WG QIR+YVFHPY +VKD RT +ET + SVMDGEL+PFI +YL+
Sbjct: 304 QELDEIRGEQSDIGWGSQIRSYVFHPYNMVKDHRTNYETGNTQSVMDGELDPFIDAYLRS 363
Query: 296 K 296
K
Sbjct: 364 K 364
>gi|253580007|ref|ZP_04857274.1| peptide chain release factor 2 [Ruminococcus sp. 5_1_39B_FAA]
gi|251848526|gb|EES76489.1| peptide chain release factor 2 [Ruminococcus sp. 5_1_39BFAA]
Length = 343
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/337 (30%), Positives = 166/337 (49%), Gaps = 75/337 (22%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
E+++ ELE + FWD+ +Q+ ++ L D+KD + + T+M+D T++++ E
Sbjct: 5 EQKVEELEREMEAPDFWDDAEVSQKKMKELKDMKDDMETYQNLVTQMEDMETMIEMGYE- 63
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY------------------------- 125
D L+ E ++ E K D + LLSG Y
Sbjct: 64 -ENDPALIPEIQEMLDEFQKDFDNIRIKTLLSGEYDSENAIIKLNAGAGGTEACDWCGML 122
Query: 126 --------DKEG--------------AVISITAGAGGTDA-------------------- 143
DK+G + S+T GT+A
Sbjct: 123 YRMYSRWADKKGFTLEVLDYLDGDEAGIKSVTFQVNGTNAYGYLKSEKGVHRLVRISPFN 182
Query: 144 -----QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 198
QTSF +VMP + ++ +DV+I ++++ I R+ G GGQ++NK +A+RITH P
Sbjct: 183 AAGKRQTSFVSCDVMPDIKKD-LDVEINDDEIRIDTYRSSGAGGQHINKTSSAIRITHYP 241
Query: 199 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 258
TG+ V+C ERSQ NK KA+ LKAKL ++ +++ ++ IRG+ WG QIR+YV
Sbjct: 242 TGIVVQCQNERSQHMNKDKAMQMLKAKLYLLKQQEAEEKLSGIRGEVTDIGWGNQIRSYV 301
Query: 259 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
PY +VKD RT ET ++ +V+DG ++ FI +YLK+
Sbjct: 302 MQPYTMVKDHRTNEETGNVDAVLDGGIDIFINAYLKW 338
>gi|229829544|ref|ZP_04455613.1| hypothetical protein GCWU000342_01640 [Shuttleworthia satelles DSM
14600]
gi|229791533|gb|EEP27647.1| hypothetical protein GCWU000342_01640 [Shuttleworthia satelles DSM
14600]
Length = 379
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 118/177 (66%), Gaps = 4/177 (2%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ QTSFS +VMP L E+ +DV++ +ED+ I R+ G GGQ++NK +
Sbjct: 202 LVRISPFNANGKRQTSFSSCDVMPEL-EQDLDVEVKDEDIRIDTYRSSGAGGQHINKTSS 260
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
A+RITH PTG+ V+C ERSQ NK KA+ LKAKL ++ E++ ++ + IRG+ W
Sbjct: 261 AIRITHFPTGIVVQCQNERSQHMNKDKAMQMLKAKLYMLKMEEQKAKAEGIRGEVTDIAW 320
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDAN 307
G QIR+YVF PY +VKD+RTG ET ++ +VMDG++ FI +YL++ +SL D N
Sbjct: 321 GNQIRSYVFQPYTMVKDLRTGEETGNVSAVMDGDINLFINAYLRW---LSLGCPDRN 374
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 78/139 (56%), Gaps = 6/139 (4%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAEL--EMKAADSSFWDNRAEAQETLQALTDVK 64
+R+++E+ + + E+ + L+ +++ EL EM+A D FW++ + ++ L +K
Sbjct: 8 MRQELESYKEPLAEVTRALDLESKHQKIEELNREMEAPD--FWNDADLSARKMKELKSLK 65
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
D + + K +++ ++ + E D DA ++ E ++ ++ + ++ + LLSG
Sbjct: 66 DDVEIADKLKNSIEEIGMLMDMANEED--DADMVGEIRLMMDQMKEDFERVRIKTLLSGE 123
Query: 125 YDKEGAVISITAGAGGTDA 143
+D A++++ AGAGGT+A
Sbjct: 124 FDANNAIVTLHAGAGGTEA 142
>gi|302671676|ref|YP_003831636.1| peptide chain release factor 2 PrfB [Butyrivibrio proteoclasticus
B316]
gi|302396149|gb|ADL35054.1| peptide chain release factor 2 PrfB [Butyrivibrio proteoclasticus
B316]
Length = 380
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 169/353 (47%), Gaps = 79/353 (22%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
++E+ AS L +K + EL + + FWDN +A + + L +++D + + ++
Sbjct: 18 LDEVTASLDLGTKKKIIEELSREMEEPGFWDNAEKANKKTKDLKNMQDLVADIERLNSQY 77
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKE-------------LNKALDQF--------- 115
D + ++ + D + E S + E LN+ D++
Sbjct: 78 TDIIDLIDMQNAEGVDDDDMAAEIRSELDEFEEKLENIRISNLLNQPYDKYDVILRLNAG 137
Query: 116 ----------------------------ELTQLLSGPYDKEGAVISITAGAGGTDA---- 143
E+ LL G E + S+T GT+A
Sbjct: 138 AGGTEACDWASMLYRMYTRWAERKGFTTEVLDLLDG---DEAGIKSVTFQISGTNAYGLL 194
Query: 144 ---------------------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGG 182
QTSF +VMP + EE +D++I +DL I R+ G GG
Sbjct: 195 KSEHGVHRLVRISPFNAQAKRQTSFVSCDVMPDI-EEDLDIEINPDDLRIDTYRSSGAGG 253
Query: 183 QNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIR 242
Q++NK +AVRITHIPTGV V C ERSQ NK KA+ LKAKL ++ +E++A+++ IR
Sbjct: 254 QHINKTSSAVRITHIPTGVVVACQNERSQFQNKDKAMQMLKAKLFIMKQEEQAAKLAGIR 313
Query: 243 GDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
G+ + WG QIR+YV PY +V D RTG + S+ V+DGEL+PFI +YLK+
Sbjct: 314 GEVMDNAWGSQIRSYVLQPYTMVNDTRTGFKASNADGVLDGELDPFINAYLKW 366
>gi|225027512|ref|ZP_03716704.1| hypothetical protein EUBHAL_01768 [Eubacterium hallii DSM 3353]
gi|224955151|gb|EEG36360.1| peptide chain release factor 2 [Eubacterium hallii DSM 3353]
Length = 371
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 171/348 (49%), Gaps = 71/348 (20%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKIN--------- 68
++E+ S L +++ ELE + + FW++ +AQE + + ++KD ++
Sbjct: 18 MKELGVSLALSHKHEQIKELESEMREEGFWNDPDKAQEVTRKVKNLKDTVSAYHALELTL 77
Query: 69 ------------------------LLTDFKTKMDDAVTIVKLTEEMDSTDAGL------- 97
LL +F+ + D+ L+ E D +A +
Sbjct: 78 DDVSTMIELGNEENDASVIPDIEELLGEFEIEFDNLKIQTLLSGEYDKNNAIVTLHAGAG 137
Query: 98 ----LEEAASIIKELNKALDQFEL-TQLLSGPYDKEGAVISITAGAGGTDA--------- 143
+ A + + +K D T++L E + SIT G +A
Sbjct: 138 GTESCDWAGMLYRMYSKWADSHGFKTEVLDYLDGDEAGIKSITFEVNGENAYGYLKSERG 197
Query: 144 ----------------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNK 187
QTSF+ +VMP + EE + V+I +ED+ I RA G GGQ++NK
Sbjct: 198 VHRLVRISPFNAAGKRQTSFASCDVMPDI-EEDLSVEIADEDIRIDTYRASGAGGQHINK 256
Query: 188 VETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVK 247
++A+RITHIPTGV V+C ERSQ NK KA+ LKAKL +I E++ ++ IRG+
Sbjct: 257 TDSAIRITHIPTGVVVQCQNERSQHKNKDKAMQMLKAKLYLIKEQENREKLSDIRGEVSD 316
Query: 248 AEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
WG QIR+YV PY +VKD RTG ET ++ SVMDG L+ F+ +YL++
Sbjct: 317 NGWGNQIRSYVMQPYTMVKDHRTGEETGNVQSVMDGNLDAFMNAYLRW 364
>gi|253680935|ref|ZP_04861738.1| peptide chain release factor 2 [Clostridium botulinum D str. 1873]
gi|253562784|gb|EES92230.1| peptide chain release factor 2 [Clostridium botulinum D str. 1873]
Length = 327
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 171/325 (52%), Gaps = 77/325 (23%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT--EEMDSTDAGLLEE 100
+S+FWDN +AQE Q +KDKI + K +++D +++++ E+ +S+ +L E
Sbjct: 3 ESNFWDNINKAQEITQEAKGLKDKIEKYYNTKNRLEDLKVLIEISIEEDDESSVEEILNE 62
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ----------TSFSGA 150
IKE+ +D+F++ LLSG YDK A++S+ AGAGGTDAQ T ++ A
Sbjct: 63 ----IKEVKVIIDEFKVQILLSGEYDKNNAIVSLHAGAGGTDAQDWTEMLLRMYTRWAEA 118
Query: 151 -----EVMPLLPEESMDVQ----------------------------------------- 164
E++ +LP + ++
Sbjct: 119 KGYKVEILDILPGDEAGIKSASLKIMGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFA 178
Query: 165 ----IPE----EDLEISFS-------RAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 209
+PE +D+EI RA G GGQ++NK ++AVRITHIPTG+ V+ ER
Sbjct: 179 SLEVLPELTESQDIEIKSDDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQSQSER 238
Query: 210 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 269
SQ NK A+S LK+KL+ + E +I+ + GD + WG QIR+YVF PY +VKD R
Sbjct: 239 SQFQNKDTAMSMLKSKLVELKERAHKEKIEDLSGDLKEIGWGSQIRSYVFQPYTMVKDHR 298
Query: 270 TGHETSDIVSVMDGELEPFIKSYLK 294
T E +++ +VMDG+++ FI YLK
Sbjct: 299 TNTEMTNVDAVMDGDIDIFIVEYLK 323
>gi|339441273|ref|YP_004707278.1| hypothetical protein CXIVA_02090 [Clostridium sp. SY8519]
gi|338900674|dbj|BAK46176.1| hypothetical protein CXIVA_02090 [Clostridium sp. SY8519]
Length = 335
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ +VMP + +E +D++I +ED+ + R+ G GGQ++NK +A+RITH+PTG+ V
Sbjct: 174 QTSFASCDVMPEIDQE-IDIEIRDEDIRVDTYRSSGAGGQHINKTSSAIRITHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK KA+ LK+KL ++ +E+ A++ IRG+ WG QIR+YV PY
Sbjct: 233 QCQNERSQHMNKDKAMQMLKSKLYLLEQEKNAAKQADIRGEVTDIGWGNQIRSYVMQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD+RTG ET ++ SVMDG L+PFI +YLK++
Sbjct: 293 MVKDLRTGEETGNVSSVMDGNLDPFINAYLKWQ 325
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M+A D FW++ E+ + Q L KD I + K M+D ++++ E D ++
Sbjct: 1 MEAPD--FWNDPEESSKKTQELKSKKDDIAVYQKLKGLMEDMEVMIEMGNE--ENDPSVI 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
E ++ ++L + +++ ++ LLSG YD+ A++++ +GAGGT+A
Sbjct: 57 PELEAMAEDLKQTMEETKVKTLLSGEYDRNNAIVTLHSGAGGTEA 101
>gi|407452946|ref|YP_006724671.1| protein release subunit factor B [Riemerella anatipestifer RA-CH-1]
gi|403313930|gb|AFR36771.1| Protein chain release factor B [Riemerella anatipestifer RA-CH-1]
Length = 376
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 110/163 (67%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ V PL+ ++S+++ I D+ RA G GGQNVNKVET
Sbjct: 201 LVRISPFDSNAKRHTSFASVYVYPLV-DDSIEININPADISFETMRASGAGGQNVNKVET 259
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVR+ H PTG+ + +E RSQL NK KAL LK++L I E+R +I + +K EW
Sbjct: 260 AVRLRHAPTGIIIENSESRSQLQNKEKALQLLKSRLYEIELEERMKARNEIEANKMKIEW 319
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYV HPYKLVKDVR+GHETSD+ +VM+GE+ PF+K+YL
Sbjct: 320 GSQIRNYVMHPYKLVKDVRSGHETSDVDAVMNGEITPFLKAYL 362
>gi|153956213|ref|YP_001396978.1| peptide chain release factor 2 [Clostridium kluyveri DSM 555]
gi|219856538|ref|YP_002473660.1| hypothetical protein CKR_3195 [Clostridium kluyveri NBRC 12016]
gi|146349071|gb|EDK35607.1| PrfB [Clostridium kluyveri DSM 555]
gi|219570262|dbj|BAH08246.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 328
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/241 (42%), Positives = 141/241 (58%), Gaps = 23/241 (9%)
Query: 61 TDVKDKINLL----TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFE 116
TD +D +L + KM V I+ + E + DAG+ + SII E + E
Sbjct: 99 TDAQDWTEMLLRMYIRWAEKMGYKVNIIDMLE---AEDAGIKSVSLSIIGEFAYGYLKSE 155
Query: 117 --LTQLLS-GPYDKEGAVISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 173
+ +L+ P++ G QTSF+ EV+P L + D++I EDL++
Sbjct: 156 KGIHRLVRISPFNANGK------------RQTSFASVEVLPELTGDQ-DIEIRSEDLKVD 202
Query: 174 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 233
RAGG GGQ+VNK E+AVRITHIPTG+ V+C ERSQ NK +AL LKAKL+ + E
Sbjct: 203 TFRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERSQHYNKEQALKILKAKLVELKERA 262
Query: 234 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
I+ + G+ WG QIR+YVFHPY LVKD RTG E+S++ SVMDG+++ FIK YL
Sbjct: 263 HKDRIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTGVESSNVSSVMDGDIDNFIKGYL 322
Query: 294 K 294
K
Sbjct: 323 K 323
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 45 SFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASI 104
+FW++ AQ+ +++ ++N ++DA ++++ +E D+ +E
Sbjct: 5 NFWNDIDNAQKIASEEKNLEGRLNRYDLLSHNIEDARILLEIIKE--EEDSMSFQEVMKD 62
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
IK++ ++ F LL G YDK A++++ G GGTDAQ
Sbjct: 63 IKDIEFQVEIFRTEILLCGEYDKNNAILNLHVGVGGTDAQ 102
>gi|313207347|ref|YP_004046524.1| peptide chain release factor 2 [Riemerella anatipestifer ATCC 11845
= DSM 15868]
gi|386320651|ref|YP_006016813.1| Protein chain release factor B [Riemerella anatipestifer RA-GD]
gi|416110319|ref|ZP_11591934.1| peptide chain release factor 2 [Riemerella anatipestifer RA-YM]
gi|442315385|ref|YP_007356688.1| Protein chain release factor B [Riemerella anatipestifer RA-CH-2]
gi|312446663|gb|ADQ83018.1| bacterial peptide chain release factor 2 (bRF-2) [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|315023242|gb|EFT36252.1| peptide chain release factor 2 [Riemerella anatipestifer RA-YM]
gi|325335194|gb|ADZ11468.1| Protein chain release factor B [Riemerella anatipestifer RA-GD]
gi|441484308|gb|AGC40994.1| Protein chain release factor B [Riemerella anatipestifer RA-CH-2]
Length = 376
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 110/163 (67%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ V PL+ ++S+++ I D+ RA G GGQNVNKVET
Sbjct: 201 LVRISPFDSNAKRHTSFASVYVYPLV-DDSIEININPADISFETMRASGAGGQNVNKVET 259
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVR+ H PTG+ + +E RSQL NK KAL LK++L I E+R +I + +K EW
Sbjct: 260 AVRLRHAPTGIIIENSESRSQLQNKEKALQLLKSRLYEIELEERMRARNEIEANKMKIEW 319
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYV HPYKLVKDVR+GHETSD+ +VM+GE+ PF+K+YL
Sbjct: 320 GSQIRNYVMHPYKLVKDVRSGHETSDVDAVMNGEITPFLKAYL 362
>gi|387792497|ref|YP_006257562.1| peptide chain release factor 2 [Solitalea canadensis DSM 3403]
gi|379655330|gb|AFD08386.1| peptide chain release factor 2 [Solitalea canadensis DSM 3403]
Length = 358
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 110/163 (67%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ V PL+ ++S+ V+I D+ RAGGKGGQNVNKVET
Sbjct: 194 LVRISPFDSNAKRHTSFASVYVYPLV-DDSISVEINPADVSWDTFRAGGKGGQNVNKVET 252
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVR+ H P+G+ + C +ERSQL NK KAL LK++L + +R + G K EW
Sbjct: 253 AVRLKHAPSGIIIECQQERSQLQNKEKALKMLKSQLYELELRKRNEAKAAVEGTKKKIEW 312
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYVFHPYKLVKD+RTG ETS++ +VMDGEL+ FIK+YL
Sbjct: 313 GSQIRNYVFHPYKLVKDLRTGEETSNVQAVMDGELDDFIKAYL 355
>gi|225851497|ref|YP_002731731.1| peptide chain release factor 2 [Persephonella marina EX-H1]
gi|225646418|gb|ACO04604.1| peptide chain release factor 2 [Persephonella marina EX-H1]
Length = 370
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 123/187 (65%), Gaps = 9/187 (4%)
Query: 118 TQLLSGPY------DKEGA--VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEED 169
T ++ GPY ++G ++ I+ TSFS V+P + +E + V+I EED
Sbjct: 178 TFIVKGPYAYGYLKGEQGVHRLVRISPFDANKRRHTSFSAVSVIPEIGDE-VKVEIKEED 236
Query: 170 LEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVI 229
L I RA G GGQ+VN ++AVRI HIPTG+TV C ERSQ+ N+ KAL LKAKL
Sbjct: 237 LRIDTFRASGAGGQHVNTTDSAVRIVHIPTGITVSCQSERSQIQNRAKALQMLKAKLYQY 296
Query: 230 AEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFI 289
E++ + K++ G+ WG QIR+YVF PY++VKD+RTG+ET +I +VMDG+++PFI
Sbjct: 297 ELEKQKEKQKELEGEKKDISWGSQIRSYVFQPYQMVKDLRTGYETGNIQAVMDGDIDPFI 356
Query: 290 KSYLKYK 296
+SYLK++
Sbjct: 357 ESYLKWR 363
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
++ +E ++ I+ + L EL +L+ + FW++ +AQE + +K
Sbjct: 5 FKEKLEQLENKFNNIKEILDPESLRGELFKLDQEMGRPDFWNDTKKAQEISSKRNAIANK 64
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
I + + K++D ++L E D +E I+ L+K + + E LLS YD
Sbjct: 65 IQEIESVEKKINDIKEFIELLEL--EYDKETEDEIKREIEALDKEITKLETASLLSEEYD 122
Query: 127 KEGAVISITAGAGGTDA 143
+ A++++ AG+GG +A
Sbjct: 123 MKNAIVTLQAGSGGVEA 139
>gi|319789223|ref|YP_004150856.1| hypothetical protein Theam_0242 [Thermovibrio ammonificans HB-1]
gi|317113725|gb|ADU96215.1| hypothetical protein Theam_0242 [Thermovibrio ammonificans HB-1]
Length = 373
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 115/360 (31%), Positives = 177/360 (49%), Gaps = 71/360 (19%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQ----------ET 56
L++ V ++ EIR L ++++ L+E+E + A FW++ +AQ +
Sbjct: 8 LKEQVSKLKEKYAEIRGYFDLDKMKRRLSEIEEEMASPDFWNDPKKAQSLSVERNHLEQE 67
Query: 57 LQALTDVKDKI-----------------------NLLTDFKTKMDDAVTIVKLTEEMDST 93
L+A V+ KI +L+D +D L+ E D
Sbjct: 68 LEAFKSVEQKIEDSEVLIEMAEEEQDGSLLDEAEQMLSDLDKTLDRLEVKKVLSGEFDKN 127
Query: 94 DAGLLEEAAS---------------IIKELNKALDQFEL--------------TQLLSGP 124
+A + A + I+ + + E+ T L+ GP
Sbjct: 128 NAIVTIHAGAGGTESCDWAQMLMRMYIRWAERKGFEVEILDLQENEEAGIKSATLLIKGP 187
Query: 125 Y--------DKEGAVISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSR 176
Y ++ I+ TSF G V+P + +E ++V+I EEDL I R
Sbjct: 188 YAYGFLRAEHGTHRLVRISPFDANARRHTSFCGVIVVPEI-DEDIEVEIKEEDLRIDTYR 246
Query: 177 AGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRAS 236
A G GGQ+VNK ++AVRITHIPTG+ V C ERSQ+ N+ +A+ LKA+L + ++R
Sbjct: 247 ASGAGGQHVNKTDSAVRITHIPTGIVVTCQSERSQIQNRQRAMKILKARLYELERQKREE 306
Query: 237 EIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+I Q RG+ WG QIR+Y+F PY+LVKD RTG ETS+I +VMDG+++ FI++YLK K
Sbjct: 307 KIAQARGEHKSIAWGNQIRSYIFQPYRLVKDHRTGVETSNIDAVMDGDIDLFIEAYLKQK 366
>gi|251799706|ref|YP_003014437.1| hypothetical protein Pjdr2_5745 [Paenibacillus sp. JDR-2]
gi|247547332|gb|ACT04351.1| hypothetical protein Pjdr2_5745 [Paenibacillus sp. JDR-2]
Length = 368
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 177/359 (49%), Gaps = 71/359 (19%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
N+++D+ + R++E+R S L + +A E K FWD+ +AQ + L +K
Sbjct: 5 NVKQDLREVAKRLQELRGSLDLDLKLEHIANFEEKMTAPDFWDDNTKAQGIISELNAIKS 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAASIIKE---------LNKALDQ 114
+ +D T+++L +E DS +A ++ AS+ ++ LN+ D+
Sbjct: 65 VVEHYERLNADCEDLQTLIELADEESDDSLEAEVIGGIASLNEKVNGFELQLLLNQPYDK 124
Query: 115 F----------------ELTQLLSGPYDK------------------EGAVISITAGAGG 140
+ Q+L Y + E + S+T G
Sbjct: 125 LNAILELHPGAGGTESQDWAQMLYRMYTRWAEKRGFKVEVLDYLDGDEAGIKSVTIAVKG 184
Query: 141 TDA-------------------------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFS 175
+A TSF +V+P + E+ ++V+I EDL++
Sbjct: 185 YNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDVVPEITED-IEVEIRTEDLKVDTY 243
Query: 176 RAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRA 235
RA G GGQ+VNK E+A+RITHIPTG+ V C +ERSQ+ N+ +A++ L++KL E++
Sbjct: 244 RASGAGGQHVNKTESAIRITHIPTGIVVACQQERSQIQNRERAMNMLRSKLYERKIEEQQ 303
Query: 236 SEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+ +IRG+ WG QIR+YVFHPY +VKD RT ET ++ +VMDG+L+ FI YL+
Sbjct: 304 KHLAEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTSVETGNVGAVMDGDLDAFIDGYLR 362
>gi|403387502|ref|ZP_10929559.1| peptide chain release factor 2 [Clostridium sp. JC122]
Length = 325
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/151 (54%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EV+P L E S D+ I +DL+I RA G GGQ+VNK E+A+RITHIPTG+ V
Sbjct: 174 QTSFAGCEVLPELTE-SQDIDIKSDDLKIDTFRASGAGGQHVNKTESAIRITHIPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK AL LK+KL+ + E+ +I+ + G+ WG QIR+YVFHPY
Sbjct: 233 QCQSERSQHTNKDYALKMLKSKLVDLKEQAHKEKIEDLAGEIKDNGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RTG ET+++ SVMDG +E FI YLK
Sbjct: 293 LVKDHRTGTETANVDSVMDGNIEEFITEYLK 323
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 45 SFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASI 104
+FWD+ +AQE Q ++ DKI +++D + +L+ E ++ ++ +E
Sbjct: 5 TFWDDVNKAQEITQQSKNINDKIEKFKSLNLRVEDLEILTELSLEEENDES--YKEIKKE 62
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+KEL +D ++ LL+G YD+ A++++ GAGG DAQ
Sbjct: 63 LKELRVIIDDLKVETLLNGEYDRNNAIVTLHTGAGGNDAQ 102
>gi|253752128|ref|YP_003025269.1| peptide chain release factor 2 [Streptococcus suis SC84]
gi|253753953|ref|YP_003027094.1| peptide chain release factor 2 [Streptococcus suis P1/7]
gi|253755172|ref|YP_003028312.1| peptide chain release factor 2 [Streptococcus suis BM407]
gi|251816417|emb|CAZ52048.1| peptide chain release factor 2 [Streptococcus suis SC84]
gi|251817636|emb|CAZ55384.1| peptide chain release factor 2 [Streptococcus suis BM407]
gi|251820199|emb|CAR46580.1| peptide chain release factor 2 [Streptococcus suis P1/7]
Length = 364
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 189/361 (52%), Gaps = 71/361 (19%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALT----- 61
+R+ +E ++ R S L+ LE+E+A LE K + FW++ AQ+T Q L
Sbjct: 6 IRQKIEELGKKLTSFRGSLDLEGLEEEIAILENKMTEPDFWNDNLAAQKTSQELNELKNT 65
Query: 62 --------DVKDKINLLTDFKTKMDDAV------TIVKLTEEMDSTDAGLL----EEAAS 103
D+ D+ +L DF + D++V +V+L + M + + LL + +
Sbjct: 66 YGNFHQMLDLYDESEILLDFLAE-DESVRDELVEKLVELDKTMTAYEMTLLLSEPYDHNN 124
Query: 104 IIKELN------KALDQFELTQLLSGPYDK---------------EGAVISITAGAGGTD 142
I E++ +A D E+ + Y E + S+T G +
Sbjct: 125 AILEIHPGSGGTEAQDWGEMLLRMYQRYGNAKGFIVETLDYQAGDEAGIKSVTLSFTGPN 184
Query: 143 A-------------------------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRA 177
A TSF+ EVMP L +++++++I ++++++ R+
Sbjct: 185 AYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPEL-DDTIEIEIRDDEVKMDTFRS 243
Query: 178 GGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASE 237
GG GGQNVNKV T VR+THIPTG+ + T +R+Q N+ +A+ L+AKL + +E++A+E
Sbjct: 244 GGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQYGNRDRAMKLLQAKLYQLEQEKKAAE 303
Query: 238 IKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKY 297
+ ++GD + WG QIR+YVF PY +VKD RTG+E + + VMDG+L+ FI +YLK++
Sbjct: 304 VDSLKGDKKEITWGSQIRSYVFTPYTMVKDHRTGYEVAQVDKVMDGDLDGFIDAYLKWRI 363
Query: 298 S 298
S
Sbjct: 364 S 364
>gi|385810075|ref|YP_005846471.1| protein release subunit factor B [Ignavibacterium album JCM 16511]
gi|383802123|gb|AFH49203.1| Protein chain release factor B [Ignavibacterium album JCM 16511]
Length = 351
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/150 (54%), Positives = 110/150 (73%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V+P + ++S++++I DL+I R+GGKGGQNVNKVETAVRITHIPTG+
Sbjct: 197 HTSFASVFVIPEI-DDSIEIEINPADLKIDTYRSGGKGGQNVNKVETAVRITHIPTGIVA 255
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQL N+ A+ LKA+L + E++ +E ++I +K EWG QIR+YVFHPY
Sbjct: 256 ACQTERSQLQNRQNAMKLLKARLYQLELEKQKAEQEEIEKSKMKIEWGSQIRSYVFHPYN 315
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD RT ETSD+ SVMDGE++ FIK+YL
Sbjct: 316 MVKDHRTDVETSDVQSVMDGEIDQFIKAYL 345
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L EK++ EL+ K+ S FW ++ AQ+ LQ + ++ + L K AV L
Sbjct: 10 LDNKEKKITELQKKSESSDFWTDQKSAQQILQEIKSLQSWVELWKSVHQKAS-AVEETIL 68
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+M+ ++ EE + EL KA+++ E +LSG D + +++I +GAGGT+AQ
Sbjct: 69 LAQMEEDES-FEEEIDKELAELEKAIEEAEFKNMLSGKDDDKNCILTIHSGAGGTEAQ 125
>gi|225847994|ref|YP_002728157.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644274|gb|ACN99324.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 370
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/187 (45%), Positives = 125/187 (66%), Gaps = 9/187 (4%)
Query: 118 TQLLSGPY------DKEGA--VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEED 169
T ++ GP+ ++G ++ I+ TSF+ V+P + EE + V+I EED
Sbjct: 179 TIIIKGPFAYGYLKGEQGVHRLVRISPFDANKRRHTSFAAVSVIPEIDEE-IKVEINEED 237
Query: 170 LEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVI 229
L I RA G GGQ+VNK ++AVRITHIPTG+ V C ERSQL NK+KAL+ LKAKL +
Sbjct: 238 LRIDTFRASGAGGQHVNKTDSAVRITHIPTGIVVACQSERSQLQNKLKALNMLKAKLYQL 297
Query: 230 AEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFI 289
+++ + K++ G+ WG QIR+YVF PY++VKD+RTG+E ++ +VMDG+++ FI
Sbjct: 298 ELQKQKEKQKELEGEKKDITWGNQIRSYVFQPYQMVKDLRTGYEVGNVEAVMDGDIDGFI 357
Query: 290 KSYLKYK 296
+SYLK+K
Sbjct: 358 ESYLKWK 364
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 28 QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT 87
++L++E+ L+ + AD +FW++ +AQE + +K+ + K+ D ++L
Sbjct: 27 EKLQEEIKVLDSQMADPNFWNDPKKAQEISSKRNYLGEKLEEILKIDKKVKDLQDYIQLL 86
Query: 88 EEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
E D L E I L K L++ E++ LLS D + A++++ AG+GG +A
Sbjct: 87 EM--EKDESLYTEVEKEINHLEKELERLEISSLLSDEMDSKNAILTLQAGSGGVEA 140
>gi|350268702|ref|YP_004880010.1| peptide chain release factor 2 [Oscillibacter valericigenes
Sjm18-20]
gi|348593544|dbj|BAK97504.1| peptide chain release factor 2 [Oscillibacter valericigenes
Sjm18-20]
Length = 374
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/150 (52%), Positives = 107/150 (71%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EVMP LP+++ DV+I ED+E+ R+ G GGQ++NK +AVR+ H+PTGV V
Sbjct: 216 QTSFAALEVMPDLPDDA-DVEIRPEDIEMQVYRSSGAGGQHINKTSSAVRLIHLPTGVVV 274
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ N+ + L+AKLL + +Q A +I I+G +K EWG QIR+YVF PY
Sbjct: 275 SCQTERSQFQNRDNCMKMLRAKLLELKAQQHAEKISDIKGVQMKIEWGSQIRSYVFMPYT 334
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
L KD RTG+ETS+I +VMDG+++ FI +YL
Sbjct: 335 LAKDTRTGYETSNINAVMDGDIDGFINAYL 364
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 69/127 (54%), Gaps = 2/127 (1%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+E++ A+ + +KE A LE + + FW++ +Q+ Q L ++ KI +
Sbjct: 20 LEKLAAALDIDTAKKEAAMLEAQTGEPEFWNDLERSQQVQQKLKRLQGKIGRQEKMVSNW 79
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
+D T+ ++ +E D D LL+E +L + + + L+ LLSG YD A++S +G
Sbjct: 80 EDLKTLCEMGQEED--DPSLLDELKEGYDKLEEEISEQRLSTLLSGEYDSSNAILSFHSG 137
Query: 138 AGGTDAQ 144
AGGT+AQ
Sbjct: 138 AGGTEAQ 144
>gi|184154810|ref|YP_001843150.1| peptide chain release factor 2 [Lactobacillus fermentum IFO 3956]
gi|183226154|dbj|BAG26670.1| peptide chain release factor 2 [Lactobacillus fermentum IFO 3956]
Length = 355
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/153 (53%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP+L +ES++V+I DL + RA G GGQ++NK E+AVRITH+PTG+
Sbjct: 197 HTSFASVDVMPIL-DESIEVEIDPSDLRVDTFRASGAGGQHINKTESAVRITHLPTGIVT 255
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQL N+I A++ LK+KL + EE++A E QI G+ + WG QIR+YVFHPY
Sbjct: 256 SSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQKEIGWGSQIRSYVFHPYT 315
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RTG+ET D+V VMDG+L+PFI +YL++
Sbjct: 316 LVKDARTGYETHDVVGVMDGDLDPFINAYLQWN 348
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 21 IRASAGL---QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI-NLLTDFKTK 76
+ AS GL L + +A+ E + FWD+ AQE + AL ++K + N LT
Sbjct: 1 MHASGGLFDLDALNESIAQGENEMTAPDFWDDNQRAQEKVAALNELKKRRDNFLT----- 55
Query: 77 MDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISI 134
+ D V + LT EM D L E + + L + L QLL GPYD+ A++ I
Sbjct: 56 LQDQVEELALTAEMLQAEPDPELKAELDDNFPGVQEHLRAYRLEQLLDGPYDQSDAILEI 115
Query: 135 TAGAGGTDAQ 144
GAGGT+AQ
Sbjct: 116 HPGAGGTEAQ 125
>gi|410729113|ref|ZP_11367197.1| peptide chain release factor 2 [Clostridium sp. Maddingley
MBC34-26]
gi|410596236|gb|EKQ50918.1| peptide chain release factor 2 [Clostridium sp. Maddingley
MBC34-26]
Length = 324
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/153 (51%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P L +E D+ I +DL+I R+GG GGQ+VNK ++AVRITH+PTG+ V
Sbjct: 173 QTSFASMEVLPELTKEQ-DIDIKADDLKIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVV 231
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ ANK A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY
Sbjct: 232 QCQNERSQFANKDTAMEMLKSKLVELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYS 291
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT ETS++ +VMDGE++ FI +YLKY+
Sbjct: 292 MVKDHRTNVETSNVTAVMDGEIDMFINAYLKYQ 324
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ A+E + +K KI+ K +++D + ++ EE D A E I
Sbjct: 6 FWDDTKRAEEVTKKSKVIKSKIDNYDKLKLQVEDVEVLKEIMEEDDEESAN---EIIDTI 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ + ++ + + LLSG YDK A++++ G GGTDA
Sbjct: 63 RNIETQIEDYNMKVLLSGEYDKNNAILTLHVGVGGTDAN 101
>gi|452821121|gb|EME28155.1| peptide chain release factor RF-2 [Galdieria sulphuraria]
Length = 419
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 169/286 (59%), Gaps = 25/286 (8%)
Query: 23 ASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLL----TDFKT 75
A+ + QL+KEL E + S +D A A T+ A TD +D +LL T +
Sbjct: 142 ATQHIVQLKKELNRWETQHLFSGRYDVNA-AMLTITAGAGGTDAQDWASLLLRMYTRWCE 200
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA--VIS 133
+ D + T+V + D +AG+ I E Q E +GA ++
Sbjct: 201 RQDFSFTVVDIA---DGEEAGVKSAYLQIQNEYAYGYLQGE-----------KGAHRLVR 246
Query: 134 ITAGAGGTDAQTSFSGAEVMPLLPEESMDVQI-PEEDLEISFSRAGGKGGQNVNKVETAV 192
++ QTSF+G +V+PLL EE ++ I P EDL ++ RAGGKGGQNVNKVETAV
Sbjct: 247 LSPFNANNKRQTSFAGVDVIPLLQEEELETLIIPPEDLVVTTMRAGGKGGQNVNKVETAV 306
Query: 193 RITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQ 252
RI HIP+G+ VR +ERSQ NK A+ L++KLL++ +E+ ++RGD V+AEWG
Sbjct: 307 RIHHIPSGIQVRSAKERSQYQNKQIAMQLLRSKLLLLEKERMERVRNEVRGDVVEAEWGN 366
Query: 253 QIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
QIRNYVFHPYK+VKD+RT E D+ SV+DG+L+ FI ++L++ S
Sbjct: 367 QIRNYVFHPYKVVKDLRTNVEKGDVESVLDGDLDDFIHAFLRWNAS 412
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 86/139 (61%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+++++ +RV+++ S + +L KE+ L+++ D+SFW+N+ +A++ L+ L+ +
Sbjct: 47 DIQREFSYLRERVDDVFKSIAMDRLRKEIELLQLETNDASFWENKTQAEKVLKDLSSKRY 106
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
K+ + ++ ++ D ++L D+ LLEEA I +L K L+++E L SG Y
Sbjct: 107 KLEKFSSWEQRLQDLQAYLQLQSTEGEPDSSLLEEATQHIVQLKKELNRWETQHLFSGRY 166
Query: 126 DKEGAVISITAGAGGTDAQ 144
D A+++ITAGAGGTDAQ
Sbjct: 167 DVNAAMLTITAGAGGTDAQ 185
>gi|429767404|ref|ZP_19299603.1| peptide chain release factor 2 [Clostridium celatum DSM 1785]
gi|429181012|gb|EKY22207.1| peptide chain release factor 2 [Clostridium celatum DSM 1785]
Length = 325
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 109/151 (72%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P L ++ D++I +EDL+I RA G GGQ+VNK E+A+RITHIPTG+ V
Sbjct: 172 QTSFASIEVLPELTKDQ-DIEIRQEDLKIDTYRASGAGGQHVNKTESAIRITHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ ANK A+S LK+KL+ + E +I+ + G+ WG QIR+YVFHPY
Sbjct: 231 QCQNERSQFANKDTAMSMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYN 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ETS++ +VM+GE++ FI +YLK
Sbjct: 291 MVKDHRTNEETSNVNAVMNGEIDAFITTYLK 321
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ FWD+ A++ + +KDKI+ T++DD + +L E+ + T + E
Sbjct: 3 EKGFWDDIKRAEDVTKESKRIKDKIDRYESLVTRLDDVEVLAELAEDDEET----INEVI 58
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
I+++ K +D++++ LLSG YDK A++++ AG GG+DA
Sbjct: 59 VEIRDIEKLIDEYKIELLLSGEYDKNDAILNLHAGVGGSDAN 100
>gi|227514375|ref|ZP_03944424.1| peptide chain release factor RF2 [Lactobacillus fermentum ATCC
14931]
gi|227087241|gb|EEI22553.1| peptide chain release factor RF2 [Lactobacillus fermentum ATCC
14931]
Length = 355
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/153 (52%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP+L +ES++V+I DL + RA G GGQ++NK E+AVRITH+PTG+
Sbjct: 197 HTSFASVDVMPIL-DESIEVEIDPSDLRVDTFRASGAGGQHINKTESAVRITHLPTGIVT 255
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQL N+I A++ LK+KL + EE++A E QI G+ + WG QIR+YVFHPY
Sbjct: 256 SSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQREIGWGSQIRSYVFHPYT 315
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RTG+ET D++ VMDG+L+PFI +YL++
Sbjct: 316 LVKDARTGYETHDVIGVMDGDLDPFINAYLQWN 348
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 21 IRASAGL---QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI-NLLTDFKTK 76
+ AS GL L + +A+ E + FWD+ AQE + AL ++K + N LT
Sbjct: 1 MHASGGLFDLDALNESIAQGENEMTAPDFWDDNQRAQEKVAALNELKKRRDNFLT----- 55
Query: 77 MDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISI 134
+ D V + LT EM D L E + + L + L QLL GPYD+ A++ I
Sbjct: 56 LQDQVEELALTAEMLQAEPDPELKAELDDNFPGVQEHLRAYRLEQLLDGPYDQSDAILEI 115
Query: 135 TAGAGGTDAQ 144
GAGGT+AQ
Sbjct: 116 HPGAGGTEAQ 125
>gi|406917045|gb|EKD55921.1| hypothetical protein ACD_58C00343G0008 [uncultured bacterium]
Length = 324
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/152 (52%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+PL E+S + I E+DLEI+ RAGG GGQNVNKVETAVR+ H+P+G+ V
Sbjct: 172 HTSFALIEVIPL-TEKSGQIMIDEKDLEITSYRAGGHGGQNVNKVETAVRVKHLPSGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C +ERSQ NK +A+ L+AKL + E+ A E ++RG+ EWG QIR+YV HPY+
Sbjct: 231 NCQQERSQSQNKEQAIKILQAKLYKLQLEREAKERDELRGEFSSPEWGSQIRSYVLHPYQ 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
+VKD RTG+ETS+ ++V+DG+L+ + +YLK+
Sbjct: 291 MVKDHRTGYETSNTLAVLDGDLDELMLAYLKH 322
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 33/128 (25%)
Query: 17 RVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTK 76
R +E+ + Q + + E++ + + +FW ++ +AQE Q L+D+ I+ K
Sbjct: 6 RKQELNQLLKIDQAKDRIIEIQNQMSLPNFWQDQKKAQELSQELSDLGKLID-------K 58
Query: 77 MDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITA 136
+ A S++A +LE E L G YDK A++S A
Sbjct: 59 FESA-----------SSEAEILE---------------LEKQTLFDGEYDKNAAILSFHA 92
Query: 137 GAGGTDAQ 144
GAGGT++Q
Sbjct: 93 GAGGTESQ 100
>gi|303279527|ref|XP_003059056.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458892|gb|EEH56188.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 337
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 106/153 (69%), Gaps = 8/153 (5%)
Query: 139 GGTDAQT------SFSGAEVMPLLPEESMDVQIPEEDLE--ISFSRAGGKGGQNVNKVET 190
GG QT +F +V P L E++ + D I+ R+GG GGQNVNKVET
Sbjct: 185 GGVAGQTPRGRHSNFVAVDVAPTLEEKARSIHWSPYDRVRVITTMRSGGAGGQNVNKVET 244
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVR+ H+PTG+ VRC EERSQ N+ KA++RLKAKL +AEE+R +++ +RGD V+AE
Sbjct: 245 AVRMKHLPTGIVVRCEEERSQAMNRAKAIARLKAKLAAVAEERRLADVAAVRGDVVRAER 304
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDG 283
GQQIRNYV HPYKLVKDVRTG ETSD+ V+ G
Sbjct: 305 GQQIRNYVLHPYKLVKDVRTGVETSDVDGVLSG 337
>gi|358065605|ref|ZP_09152141.1| peptide chain release factor 2 [Clostridium hathewayi WAL-18680]
gi|356696091|gb|EHI57714.1| peptide chain release factor 2 [Clostridium hathewayi WAL-18680]
Length = 332
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 110/160 (68%), Gaps = 4/160 (2%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF +VMP + EE +DV I ++DL I R+ G GGQ++NK +A+RITHIPTGV V
Sbjct: 174 QTSFVSCDVMPDI-EEDLDVDINQDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK KA+ LKAKL ++ +++ A+ + IRGD + WG QIR+YV PY
Sbjct: 233 QCQNERSQFQNKDKAMQMLKAKLFLLKQQENAANLSDIRGDVAEIGWGNQIRSYVLQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 303
+VKD RT E+ ++ +V+DG L+ FI +YLK+ MSL+
Sbjct: 293 MVKDHRTNEESGNVSAVLDGNLDAFISAYLKW---MSLNG 329
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ + ++ ++KD + +T+ ++ ++++ E D ++ E ++
Sbjct: 6 FWDDPERSTRIMKEAKNLKDTVESYRRLETQFEEIGLLIEMGYE--ENDPEVIPEIQEMM 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
E + L+ ++ LLSG YD A++ + AGAGGT++
Sbjct: 64 TEFEEKLENLRISTLLSGEYDSSNAILKLNAGAGGTES 101
>gi|258517064|ref|YP_003193286.1| peptide chain release factor 2 [Desulfotomaculum acetoxidans DSM
771]
gi|257780769|gb|ACV64663.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfotomaculum
acetoxidans DSM 771]
Length = 366
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/279 (38%), Positives = 162/279 (58%), Gaps = 25/279 (8%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLLTDFKTKM-DDAVT 82
L+QLE ++ELE+ S +D R A +L A T+ +D + +L T+ +D
Sbjct: 101 LKQLELRVSELELDVLLSGEYD-RGNAIISLHAGAGGTEAQDWVEMLLRMFTRWAEDHRY 159
Query: 83 IVKLTEEMDSTDAGLLEEAASIIKE-----LNKALDQFELTQLLSGPYDKEGAVISITAG 137
V + + + +AG+ I+ L L ++ P+D TAG
Sbjct: 160 RVIVLDMLSGDEAGIKSVTVEIVGPNAFGYLKSEKGVHRLVRI--SPFD--------TAG 209
Query: 138 AGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 197
TSF+ EV+P + +E +D++I EDL+I RAGG GGQ+VNK ++AVRITH+
Sbjct: 210 R----RHTSFASVEVLPEV-DEDVDIEIKTEDLKIDTFRAGGAGGQHVNKTDSAVRITHL 264
Query: 198 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 257
PTG+ V C ERSQL+N+ A+ LKAKL + +++ +E+ +RGD + WG QIR+Y
Sbjct: 265 PTGIVVSCQNERSQLSNRNSAMKLLKAKLAELELQKKEAEMASLRGDHQEIAWGSQIRSY 324
Query: 258 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
VFHPY LVKD RTG ET +I +VM+GEL+ F+ ++L ++
Sbjct: 325 VFHPYSLVKDHRTGAETGNIEAVMNGELDKFMAAFLLWQ 363
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 4 FYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDV 63
+ ++K +E S RV ++R S + E E+ +L+ FWD++A+AQ+ + +
Sbjct: 2 YTEIKKTLEELSGRVADLRVSLDIAGKESEIEKLDKLMMAPGFWDDQAQAQKISRQQAVL 61
Query: 64 KDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSG 123
KD ++L + + ++D + +L +E D A L E A +K+L + + EL LLSG
Sbjct: 62 KDSVSLYGELRQSLEDLEVLAELAQEEDDDIA--LRETAKDLKQLELRVSELELDVLLSG 119
Query: 124 PYDKEGAVISITAGAGGTDAQ 144
YD+ A+IS+ AGAGGT+AQ
Sbjct: 120 EYDRGNAIISLHAGAGGTEAQ 140
>gi|372324888|ref|ZP_09519477.1| Peptide chain release factor 2 [Oenococcus kitaharae DSM 17330]
gi|366983696|gb|EHN59095.1| Peptide chain release factor 2 [Oenococcus kitaharae DSM 17330]
Length = 356
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 109/153 (71%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++ ++++I +D+++ R+GG GGQNVNKV TAVR+TH+PTG+ V
Sbjct: 197 HTSFVSIDVMPELDDDEIEIEIRPQDIKMDVYRSGGAGGQNVNKVSTAVRLTHLPTGIVV 256
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ER+Q N+ A+ LKAKL I E++RA E +I G ++ WG QIR+YVF PY+
Sbjct: 257 ASQVERTQYGNRDIAMKMLKAKLYEIEEQKRAEEHAKISGTKLEVAWGSQIRSYVFQPYR 316
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD+R+G+ET D VMDG L+PFI +YL+++
Sbjct: 317 MVKDLRSGYETGDTDGVMDGNLDPFINAYLQWQ 349
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L L+ +AE E K + +FWD+ AQ+ + +KD+ + + ++ D +++L
Sbjct: 10 LDALDASIAENEDKMSQPNFWDDNEAAQKVIDETNVLKDRRDSFLNLDKQVQDLTALIEL 69
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
E D D + E S I++ K L + L QLL+G YD A++ I G GGT++
Sbjct: 70 LSEED--DPEMHAELESGIEKTEKDLQAYNLQQLLTGKYDANNAILEIHPGEGGTES 124
>gi|345866406|ref|ZP_08818434.1| peptide chain release factor 2 [Bizionia argentinensis JUB59]
gi|344049456|gb|EGV45052.1| peptide chain release factor 2 [Bizionia argentinensis JUB59]
Length = 317
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 110/150 (73%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL+ ++++++ I D+EI+ SR+GG GGQNVNKVET V++ H PTG+ +
Sbjct: 156 HTSFASVYVYPLV-DDTIEIDINPADIEITTSRSGGAGGQNVNKVETKVQLVHKPTGIQI 214
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C+E RSQ N+ +A+ L+++L I +++ ++ + I D +K EWG QIRNYV HPYK
Sbjct: 215 SCSETRSQHDNRSRAMQMLRSQLYEIELQKQLAQREDIESDKMKIEWGSQIRNYVMHPYK 274
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRT HET ++ VMDGE++PF+K+YL
Sbjct: 275 LVKDVRTAHETGNVDDVMDGEIQPFLKAYL 304
>gi|385811987|ref|YP_005848378.1| peptide chain release factor RF2 [Lactobacillus fermentum CECT
5716]
gi|299782886|gb|ADJ40884.1| Peptide chain release factor RF2 [Lactobacillus fermentum CECT
5716]
Length = 332
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/153 (52%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP+L +ES++V+I DL + RA G GGQ++NK E+AVRITH+PTG+
Sbjct: 174 HTSFASVDVMPIL-DESIEVEIDPSDLRVDTFRASGAGGQHINKTESAVRITHLPTGIVT 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQL N+I A++ LK+KL + EE++A E QI G+ + WG QIR+YVFHPY
Sbjct: 233 SSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQREIGWGSQIRSYVFHPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RTG+ET D++ VMDG+L+PFI +YL++
Sbjct: 293 LVKDARTGYETHDVIGVMDGDLDPFINAYLQWN 325
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 56/109 (51%), Gaps = 10/109 (9%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKI-NLLTDFKTKMDDAVTIVKLTEEM--DSTDA 95
M A D FWD+ AQE + AL ++K + N LT + D V + LT EM D
Sbjct: 1 MTAPD--FWDDNQRAQEKVAALNELKKRRDNFLT-----LQDQVEELALTAEMLQAEPDP 53
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L E + + L + L QLL GPYD+ A++ I GAGGT+AQ
Sbjct: 54 ELKAELDDNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAGGTEAQ 102
>gi|260663162|ref|ZP_05864054.1| peptide chain release factor 2 [Lactobacillus fermentum 28-3-CHN]
gi|260552354|gb|EEX25405.1| peptide chain release factor 2 [Lactobacillus fermentum 28-3-CHN]
Length = 332
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/153 (52%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP+L +ES++V+I DL + RA G GGQ++NK E+AVRITH+PTG+
Sbjct: 174 HTSFASVDVMPIL-DESIEVEIDPSDLRVDTFRASGAGGQHINKTESAVRITHLPTGIVT 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQL N+I A++ LK+KL + EE++A E QI G+ + WG QIR+YVFHPY
Sbjct: 233 SSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQREIGWGSQIRSYVFHPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RTG+ET D++ VMDG+L+PFI +YL++
Sbjct: 293 LVKDARTGYETHDVIGVMDGDLDPFINAYLQWN 325
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 10/109 (9%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKI-NLLTDFKTKMDDAVTIVKLTEEM--DSTDA 95
M A D FWD+ AQE + AL ++K + N LT + D V + LT EM D
Sbjct: 1 MTAPD--FWDDNQRAQEKVAALNELKKRRDNFLT-----LQDQVEELALTAEMLQAEPDP 53
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L E + + + L + L QLL GPYD+ A++ I GAGGT+AQ
Sbjct: 54 ELKAELDNNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAGGTEAQ 102
>gi|240143320|ref|ZP_04741921.1| peptide chain release factor 2 [Roseburia intestinalis L1-82]
gi|257204691|gb|EEV02976.1| peptide chain release factor 2 [Roseburia intestinalis L1-82]
gi|291536819|emb|CBL09931.1| bacterial peptide chain release factor 2 (bRF-2) [Roseburia
intestinalis M50/1]
gi|291539122|emb|CBL12233.1| bacterial peptide chain release factor 2 (bRF-2) [Roseburia
intestinalis XB6B4]
Length = 338
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/152 (51%), Positives = 107/152 (70%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF +VMP + EE +DV+I E+DL I R+ G GGQ++NK +A+RITHIPTG+ V
Sbjct: 174 QTSFVSCDVMPDI-EEDLDVEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK KA+ LKAKL ++ +++ A + IRG+ + WG QIR+YV PY
Sbjct: 233 QCQNERSQFQNKDKAMQMLKAKLYLLKQQENAEKAADIRGEVTEIGWGNQIRSYVMQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
+VKD RTG ET ++ SVMDG+++ FI YLK+
Sbjct: 293 MVKDHRTGVETGNVDSVMDGKIDIFINGYLKW 324
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Query: 45 SFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASI 104
+FWD+ +Q+ ++ L +KD + KT+ +D T++++ E DA L+ E +
Sbjct: 5 NFWDDPVVSQKKMKELKSMKDDVATYASLKTEFEDIETLIEMGYE--ENDASLIPEIQEM 62
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+ E K + + LLSG YD +GA++S+ AGAGGT++
Sbjct: 63 LDEFTKTYEGIRIKTLLSGEYDSDGAIVSLHAGAGGTES 101
>gi|404448913|ref|ZP_11013905.1| peptide chain release factor 2 [Indibacter alkaliphilus LW1]
gi|403765637|gb|EJZ26515.1| peptide chain release factor 2 [Indibacter alkaliphilus LW1]
Length = 315
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/150 (54%), Positives = 110/150 (73%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V P++ ++S++++I D+E+ SR+GG GGQNVNKVET V++TH PTG+ V
Sbjct: 156 HTSFASVYVYPVV-DDSIEIEINPSDVELHTSRSGGAGGQNVNKVETKVQLTHKPTGIVV 214
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQLAN+ KA+ LK++L + E+R +E +I +K ++G QIRNYV HPYK
Sbjct: 215 VCQIERSQLANREKAMQMLKSRLYQMEMEKRNAERAKIESGKMKIDFGSQIRNYVLHPYK 274
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKD RTGHETSD+ +V+DG L FIKSYL
Sbjct: 275 LVKDARTGHETSDVQTVLDGGLGEFIKSYL 304
>gi|357038237|ref|ZP_09100035.1| Peptide chain release factor 2 [Desulfotomaculum gibsoniae DSM
7213]
gi|355359812|gb|EHG07572.1| Peptide chain release factor 2 [Desulfotomaculum gibsoniae DSM
7213]
Length = 329
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 112/151 (74%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++ +DVQI EDL+I R+GG GGQ+VNK ++AVRITH+PTG+ V
Sbjct: 174 HTSFASVDVLPEV-QDDIDVQIDPEDLKIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL+N+ A+ LKAKL + +++ +E+ Q+RG+ + WG QIR+YVFHPY
Sbjct: 233 QCQNERSQLSNRNTAMKLLKAKLFDLEMQKKDAELAQMRGENKEIAWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RTG E ++ +VMDGE++ FI +YL+
Sbjct: 293 LVKDHRTGVEMGNVDAVMDGEIDDFITAYLR 323
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
Query: 45 SFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASI 104
FW+ ++ AQE Q +T++K++I ++ M+D ++ L EE D L +EA +
Sbjct: 5 GFWEEQSRAQEVTQTVTNLKERITAFSELYGAMEDLEVLIDLGEE--ENDDSLADEAEAA 62
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +LN+ + E+ +LSGPYD A++++ AGAGGT+AQ
Sbjct: 63 LAQLNRRVAGLEMQVMLSGPYDAGNAIVAMHAGAGGTEAQ 102
>gi|431797556|ref|YP_007224460.1| peptide chain release factor 2 [Echinicola vietnamensis DSM 17526]
gi|430788321|gb|AGA78450.1| peptide chain release factor 2 [Echinicola vietnamensis DSM 17526]
Length = 366
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 114/163 (69%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ G TSF+ V P++ ++S++++I D+E+ SR+GG GGQNVNKVET
Sbjct: 194 LVRISPFDSGGRRHTSFASVYVYPVV-DDSIEIEINPSDIELQTSRSGGAGGQNVNKVET 252
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
V++TH PTG+ V C ERSQLAN+ KA+ LK++L + E+R +E +I +K ++
Sbjct: 253 KVQLTHKPTGIVVVCQVERSQLANREKAMQMLKSRLYQMEMEKRNAERDKIEAGKMKIDF 312
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYV HPYKLVKD RT HETSD+ +V+DG L FIK+YL
Sbjct: 313 GSQIRNYVLHPYKLVKDARTSHETSDVQTVLDGGLNDFIKAYL 355
>gi|15672953|ref|NP_267127.1| peptide chain release factor 2 [Lactococcus lactis subsp. lactis
Il1403]
gi|281491474|ref|YP_003353454.1| peptide chain release factor 2 [Lactococcus lactis subsp. lactis
KF147]
gi|385830507|ref|YP_005868320.1| peptide chain release factor RF-2 [Lactococcus lactis subsp. lactis
CV56]
gi|418038086|ref|ZP_12676435.1| hypothetical protein LLCRE1631_01242 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|24638157|sp|Q9CGX1.1|RF2_LACLA RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|12723911|gb|AAK05069.1|AE006331_9 peptide chain release factor 2 [Lactococcus lactis subsp. lactis
Il1403]
gi|281375192|gb|ADA64705.1| Peptide chain release factor 2 (RF-2) [Lactococcus lactis subsp.
lactis KF147]
gi|326406515|gb|ADZ63586.1| peptide chain release factor RF-2 [Lactococcus lactis subsp. lactis
CV56]
gi|354693764|gb|EHE93497.1| hypothetical protein LLCRE1631_01242 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|374673029|dbj|BAL50920.1| peptide chain release factor RF-2 [Lactococcus lactis subsp. lactis
IO-1]
Length = 365
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 113/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++S++V + + D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 213 HTSFTSVDVMPEL-DDSIEVDVRDADVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ KA++ LK+KL + +++ +E+ ++RGD + WG QIR+YVF PY+
Sbjct: 272 QSTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQSEISWGSQIRSYVFMPYQ 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RTG+ET I +VMDGEL+ FI +YL++
Sbjct: 332 LVKDTRTGYETGQISNVMDGELDGFINAYLRWN 364
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R +E ++++ R S L++LE+E+A LE A FW+++A AQ+ + +K K
Sbjct: 6 IRNLLEGYAEKINGFRESLDLERLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAK 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ +++A T++++ +E D + E + L + ++ +EL +L+ PYD
Sbjct: 66 YDNYQAMNNMLEEAQTMLEMLQE--EADEEMQAELEEMTIALGQKIESYELEIMLNQPYD 123
Query: 127 KEGAVISITAGAGGTDAQ 144
AV+ I G+GGT++Q
Sbjct: 124 HMNAVLEIHPGSGGTESQ 141
>gi|258512512|ref|YP_003185946.1| hypothetical protein Aaci_2552 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257479238|gb|ACV59557.1| conserved hypothetical protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 383
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 108/153 (70%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + E+ ++I E+L I R+ G GGQ+VN ++AVRITHIPTG+ V
Sbjct: 215 HTSFASVDVIPEIAEDDDSIEIRPEELRIDTYRSTGAGGQHVNTTDSAVRITHIPTGIVV 274
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LK++L E+R E+ Q+RG+ + WG QIR+YVFHPY
Sbjct: 275 TCQSERSQIQNRARAMEILKSRLAAKRREEREQELAQLRGEQKEIAWGSQIRSYVFHPYS 334
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RT +ETS+ +VMDGE++PFI +YL+++
Sbjct: 335 LVKDHRTNYETSNTQAVMDGEIDPFIHAYLRWQ 367
>gi|323445681|gb|EGB02173.1| hypothetical protein AURANDRAFT_35500 [Aureococcus anophagefferens]
Length = 268
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 115/169 (68%), Gaps = 8/169 (4%)
Query: 144 QTSFSGAEVMPLLPEESMDV-----QIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 198
QTSF+ E P LP++ D+ ++ DLE++ +RAGG GGQNVNKVETAVR+TH+P
Sbjct: 102 QTSFASVEPTPDLPDDHPDLPADVAELDPADLEVTTARAGGAGGQNVNKVETAVRMTHVP 161
Query: 199 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 258
TG+ VRC ER+Q ANK AL+ L+AKL+ EQRA+ + IRGD V A++G +R+YV
Sbjct: 162 TGLRVRCARERTQGANKAIALTMLRAKLVAAMAEQRAATLADIRGDRVAADFGASVRSYV 221
Query: 259 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDAN 307
HPYKLVKD + HET V+DG+L PF+ + L+ + + A D+N
Sbjct: 222 LHPYKLVKDDK--HETPHATDVLDGDLGPFLDAELR-RRARGEEAGDSN 267
>gi|218291021|ref|ZP_03495062.1| peptide chain release factor 2 [Alicyclobacillus acidocaldarius
LAA1]
gi|218239039|gb|EED06244.1| peptide chain release factor 2 [Alicyclobacillus acidocaldarius
LAA1]
Length = 342
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 108/153 (70%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + E+ ++I E+L I R+ G GGQ+VN ++AVRITHIPTG+ V
Sbjct: 174 HTSFASVDVIPEIAEDDDSIEIRPEELRIDTYRSTGAGGQHVNTTDSAVRITHIPTGIVV 233
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LK++L E+R E+ Q+RG+ + WG QIR+YVFHPY
Sbjct: 234 TCQSERSQIQNRARAMEILKSRLAAKRREEREQELAQLRGEQKEIAWGSQIRSYVFHPYS 293
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RT +ETS+ +VMDGE++PFI +YL+++
Sbjct: 294 LVKDHRTNYETSNTQAVMDGEIDPFIHAYLRWQ 326
>gi|384136540|ref|YP_005519254.1| hypothetical protein TC41_2844 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339290625|gb|AEJ44735.1| hypothetical protein TC41_2844 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 342
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 108/153 (70%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + E+ ++I E+L I R+ G GGQ+VN ++AVRITHIPTG+ V
Sbjct: 174 HTSFASVDVIPEIAEDDDSIEIRPEELRIDTYRSTGAGGQHVNTTDSAVRITHIPTGIVV 233
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LK++L E+R E+ Q+RG+ + WG QIR+YVFHPY
Sbjct: 234 TCQSERSQIQNRARAMEILKSRLAAKRREEREQELAQLRGEQKEIAWGSQIRSYVFHPYS 293
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RT +ETS+ +VMDGE++PFI +YL+++
Sbjct: 294 LVKDHRTNYETSNTQAVMDGEIDPFIHAYLRWQ 326
>gi|150015324|ref|YP_001307578.1| peptide chain release factor 2 [Clostridium beijerinckii NCIMB
8052]
gi|149901789|gb|ABR32622.1| peptide chain release factor 2 [Clostridium beijerinckii NCIMB
8052]
Length = 324
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 108/151 (71%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P L +E D++I +DL+I R+GG GGQ+VNK ++AVRITHIPTGV V
Sbjct: 173 QTSFASMEVLPELTKEQ-DIEIRSDDLKIDTYRSGGAGGQHVNKTDSAVRITHIPTGVVV 231
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ +N+ A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY
Sbjct: 232 QCQNERSQFSNRDTAMEMLKSKLVELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYS 291
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ETS++ SVMDGE++ FI +YLK
Sbjct: 292 MVKDHRTNVETSNVTSVMDGEIDMFINAYLK 322
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+S FWDN +A+E + +KDKI K++++D + ++ E+ D A E
Sbjct: 3 ESGFWDNIKKAEEVTKKSKSIKDKIESFDKLKSQIEDIEVLKEIMEDDDEESAN---EII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
++++ +D + + LL G YDK A++++ G GGTDA
Sbjct: 60 QTLRDIQAQIDDYNMKVLLCGEYDKNNAILTLHVGVGGTDA 100
>gi|256848105|ref|ZP_05553549.1| peptide chain release factor 2 [Lactobacillus coleohominis
101-4-CHN]
gi|256715165|gb|EEU30142.1| peptide chain release factor 2 [Lactobacillus coleohominis
101-4-CHN]
Length = 332
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L +ES++V I DL + R+ G GGQ++NK E+AVRITH+PTG+
Sbjct: 174 HTSFASVDVMPEL-DESVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHLPTGIVT 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQL N++ A++ LK+KL + +E++A + ++ G+ ++ WG QIR+YVFHPY
Sbjct: 233 SSQAERSQLQNRVTAMNMLKSKLYELEQEKQAKQRAELEGEQLEIGWGSQIRSYVFHPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKD RTG+ET D SVMDG+L+PFI +YL+++ S
Sbjct: 293 LVKDNRTGYETHDGQSVMDGDLDPFINAYLQWQLS 327
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 64/106 (60%), Gaps = 4/106 (3%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M A D FW++ +AQ+ + +K++ + T+ + ++ D T V+L +EM D L
Sbjct: 1 MTAPD--FWNDSEQAQKLINDNNQLKERRDTFTNLRDQLADLATSVELLKEMPDDD--LQ 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+E + ++ K L+Q+ L+QLLSGPYD A++ I GAGGT+AQ
Sbjct: 57 KELDQKLPQVEKQLEQYRLSQLLSGPYDANNAILEIHPGAGGTEAQ 102
>gi|188590075|ref|YP_001919915.1| peptide chain release factor 2 [Clostridium botulinum E3 str.
Alaska E43]
gi|188500356|gb|ACD53492.1| peptide chain release factor 2 [Clostridium botulinum E3 str.
Alaska E43]
Length = 344
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 171/336 (50%), Gaps = 70/336 (20%)
Query: 28 QQLEKELAELEMKAADSSFWDNRAEAQET----------LQALTDVKDKINLLTDFKTKM 77
+ LEK+L+ELE + + FW++ A+E +Q + V+ K++ + K M
Sbjct: 7 EYLEKQLSELEFQMQEDGFWNDTKRAEEITKESKRIKDKIQRVESVQSKLDDIEVLKEMM 66
Query: 78 DD-----AVTIV----KLTEEMDSTDAGLL----EEAASIIKELNKAL---DQFELTQLL 121
DD A I+ ++ EE+D+ + +L + + I L+ + D + T++L
Sbjct: 67 DDDDEESAYEIINNIKEIEEEIDNYNMEILLSGEYDKNNAILTLHVGVGGTDANDWTEML 126
Query: 122 SGPYDK------------------EGAVISITAGAGGTDA-------------------- 143
Y + E + S+T G A
Sbjct: 127 LRMYTRWCEKKNYKVEVIDLLEGDEAGIKSVTLKVIGEYAYGYLKAEKGIHRLVRISPFN 186
Query: 144 -----QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 198
QTSF+ EV+P L +E D+ I ED+++ RA G GGQ++NK ++AVRITHIP
Sbjct: 187 ANGKRQTSFASMEVLPELTKEQ-DIDIRSEDIKVDTYRASGAGGQHINKTDSAVRITHIP 245
Query: 199 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 258
TGV V+C ERSQ +NK A+ LKAKL+ + E +I+ + G+ WG QIR+YV
Sbjct: 246 TGVVVQCQNERSQFSNKDTAMGMLKAKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYV 305
Query: 259 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
FHPY LVKD RT E S++ +VMDG+L+ FI SYLK
Sbjct: 306 FHPYNLVKDHRTNVEVSNVTAVMDGDLDLFINSYLK 341
>gi|392390216|ref|YP_006426819.1| peptide chain release factor 2 (bRF-2) [Ornithobacterium
rhinotracheale DSM 15997]
gi|390521294|gb|AFL97025.1| bacterial peptide chain release factor 2 (bRF-2) [Ornithobacterium
rhinotracheale DSM 15997]
Length = 371
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 111/165 (67%), Gaps = 1/165 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF V PL+ ++++++ I D+E+ SR+GG GGQNVNKVET
Sbjct: 196 LVRISPFDSNAKRHTSFVSVYVYPLV-DDTIEIDINPNDVEMQTSRSGGAGGQNVNKVET 254
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
V++TH PTG+ V C ERSQLAN+ +A+ LK++L I E+R +I + EW
Sbjct: 255 KVQLTHKPTGIVVVCQVERSQLANRERAMQMLKSELYKIELEKRMEARNEIEANKKSIEW 314
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
G QIRNYV HPYKLVKDVRTG ETSD+ SVM+G ++ F+KSYL +
Sbjct: 315 GSQIRNYVMHPYKLVKDVRTGEETSDVDSVMNGNIDDFLKSYLMF 359
>gi|125624350|ref|YP_001032833.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
MG1363]
gi|389854712|ref|YP_006356956.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
NZ9000]
gi|166223629|sp|A2RLF5.1|RF2_LACLM RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|124493158|emb|CAL98122.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
MG1363]
gi|300071134|gb|ADJ60534.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 365
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 114/153 (74%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++S++V++ + D+++ R+GG GGQNVNKV T VR+TH+PTG+ V
Sbjct: 213 HTSFTSVDVMPEL-DDSIEVEVRDADVKMDTFRSGGAGGQNVNKVSTGVRLTHVPTGIVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ KA++ LK+KL + +++ +E+ ++RGD + WG QIR+YVF PY+
Sbjct: 272 QSTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQSEISWGSQIRSYVFMPYQ 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RTG+ET I +VMDGE++ FI +YL++
Sbjct: 332 LVKDTRTGYETGQISNVMDGEIDGFINAYLRWN 364
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R +E S+++ R S L +LE+E+A LE A FW+++A AQ+ + +K K
Sbjct: 6 IRNLLEGYSEKINGFRDSLDLDRLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAK 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ T +++A T++++ +E D + E + L + ++ +EL +L+ PYD
Sbjct: 66 YDNYQAMNTMLEEAQTMLEMLQE--EADEDMQVELEEMTTALGQKIESYELEIMLNQPYD 123
Query: 127 KEGAVISITAGAGGTDAQ 144
AV+ I G+GGT++Q
Sbjct: 124 HMNAVLEIHPGSGGTESQ 141
>gi|456012879|gb|EMF46567.1| Peptide chain release factor 2 [Planococcus halocryophilus Or1]
Length = 328
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 153/326 (46%), Gaps = 75/326 (23%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
D FW+N+ AQ + L +K+ +N F ++ ++L E D D L +
Sbjct: 4 DPDFWNNQETAQTVISELNGLKEIVNAYYSFVETQENMEMSLELLREEDDED--LHADVD 61
Query: 103 SIIKELNKALDQFELTQLLSGPYDK----------------------------------- 127
+K+ L +ELT LLS PYDK
Sbjct: 62 KDMKQFISDLADYELTMLLSEPYDKNNAILELHPGAGGTESQDWCSMLLRMYTRWAEKRG 121
Query: 128 ------------EGAVISITAGAGGTDA-------------------------QTSFSGA 150
E V S+T G G +A TSF
Sbjct: 122 FKVETLDYLAGDEAGVKSVTLGIRGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 181
Query: 151 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 210
EVMP E +++ I EDL++ RA G GGQ++N ++AVRITH+PTG V C +ERS
Sbjct: 182 EVMPEFTGE-IEIDIRTEDLKVDTYRASGAGGQHINTTDSAVRITHLPTGAVVTCQQERS 240
Query: 211 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 270
Q+ N+ KA+ LKAKL + E+ + + +IRG+ + WG QIR+YVFHPY +VKD RT
Sbjct: 241 QIKNREKAMQMLKAKLYALKIEEEEARLLEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 300
Query: 271 GHETSDIVSVMDGELEPFIKSYLKYK 296
ET ++ +VMDG+++ FI S L+ K
Sbjct: 301 NFETGNLGAVMDGDIDGFINSLLRSK 326
>gi|116511800|ref|YP_809016.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
SK11]
gi|385838511|ref|YP_005876141.1| Peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
A76]
gi|414074197|ref|YP_006999414.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
UC509.9]
gi|122940216|sp|Q02ZM8.1|RF2_LACLS RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|116107454|gb|ABJ72594.1| bacterial peptide chain release factor 2 (bRF-2) [Lactococcus
lactis subsp. cremoris SK11]
gi|358749739|gb|AEU40718.1| Peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
A76]
gi|413974117|gb|AFW91581.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
UC509.9]
Length = 365
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 114/153 (74%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++S++V++ + D+++ R+GG GGQNVNKV T VR+TH+PTG+ V
Sbjct: 213 HTSFTSVDVMPEL-DDSIEVEVRDADVKMDTFRSGGAGGQNVNKVSTGVRLTHVPTGIVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ KA++ LK+KL + +++ +E+ ++RGD + WG QIR+YVF PY+
Sbjct: 272 QSTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQSEISWGSQIRSYVFMPYQ 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RTG+ET I +VMDGE++ FI +YL++
Sbjct: 332 LVKDTRTGYETGQISNVMDGEIDGFINAYLRWN 364
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R +E S+++ R S L +LE+E+A LE A FW+++A AQ+ + +K K
Sbjct: 6 IRNLLEGYSEKINGFRDSLDLDRLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAK 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ +++A T++++ +E D + E + L + ++ +EL +L+ PYD
Sbjct: 66 YDNYQAMNNMLEEAQTMLEMLQE--EADEDMQVELEEMTTALGQKIESYELEIMLNQPYD 123
Query: 127 KEGAVISITAGAGGTDAQ 144
AV+ I G+GGT++Q
Sbjct: 124 HMNAVLEIHPGSGGTESQ 141
>gi|338706540|ref|YP_004673308.1| peptide chain release factor RF2 [Treponema paraluiscuniculi
Cuniculi A]
gi|335344601|gb|AEH40517.1| peptide chain release factor RF2 [Treponema paraluiscuniculi
Cuniculi A]
Length = 368
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 159/336 (47%), Gaps = 74/336 (22%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
E +A LE AA FW RA A+ L L ++ + + + D + +L E
Sbjct: 25 EARIATLEAAAAAPDFWSERARAEALLAELKTLRATLEPWRALRRESADLRALYELARE- 83
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDK----------------------- 127
+ DA L E +S+ +++ ++ LT+LL D+
Sbjct: 84 -AQDASLEPELSSLFSDISARFEEASLTRLLHEEVDRLDAFVTIHSGAGGVEACDWAQML 142
Query: 128 -----------------------EGAVISITAGAGGTDA--------------------- 143
EG V S+T G+ A
Sbjct: 143 MRMYTRWAERRSFCVHIVDLLESEGGVKSVTLKICGSHAFGFLKGETGVHRLVRISPFDS 202
Query: 144 ----QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPT 199
TSF+ V P+L ++ ++V I ED+ + R+GG GGQ+VNK ++AVRITH+PT
Sbjct: 203 AARRHTSFTSTYVFPVL-DDHVEVHIRSEDMRVDTYRSGGAGGQHVNKTDSAVRITHLPT 261
Query: 200 GVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVF 259
G+ V C ERSQ++N+ ALS L+A+L +++ E ++ + WG QIR+YVF
Sbjct: 262 GIVVTCQNERSQISNRTTALSLLRARLYAYERQKKQQEHQRFASEKKDISWGNQIRSYVF 321
Query: 260 HPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
HPY +VKD R+ ET +I +VMDG LEPFI+SYL++
Sbjct: 322 HPYTMVKDHRSKCETGNIHAVMDGALEPFIRSYLEF 357
>gi|406980870|gb|EKE02424.1| hypothetical protein ACD_20C00391G0018 [uncultured bacterium]
Length = 309
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 107/151 (70%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV P++P V I E++E+ RAGG GGQNVNKVETAVRI H P+G+ V
Sbjct: 152 QTSFASLEVSPVMPGIESKVDIRPEEIEVETMRAGGAGGQNVNKVETAVRIVHKPSGIVV 211
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C +ERSQ NK A+ L +KLL I + Q ++ QI+G A+ +G QIR+YVFHPY
Sbjct: 212 KCQQERSQAQNKELAMQLLASKLLAIKQAQHEDKMAQIKGAAMDINFGNQIRSYVFHPYS 271
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT +ET ++ +VM+GEL+ FI++YL+
Sbjct: 272 MVKDHRTNYETGNVEAVMNGELDSFIEAYLR 302
>gi|302385044|ref|YP_003820866.1| hypothetical protein Closa_0615 [Clostridium saccharolyticum WM1]
gi|302195672|gb|ADL03243.1| hypothetical protein Closa_0615 [Clostridium saccharolyticum WM1]
Length = 377
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 111/165 (67%), Gaps = 1/165 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ QTSF +VMP + EE +DV+I EEDL I R+ G GGQ++NK +
Sbjct: 201 LVRISPFNAAGKRQTSFVSCDVMPDI-EEDLDVEINEEDLRIDTYRSSGAGGQHINKTSS 259
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
A+RITH+PTG+ V+C ERSQ NK KA+ LKAKL ++ +++ A ++ IRGD + W
Sbjct: 260 AIRITHLPTGIVVQCQNERSQFQNKDKAMQMLKAKLYMLKQQENAEKLSGIRGDVTEIGW 319
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
G QIR+YV PY +VKD RT ET ++ SV+DG L+ F+ +YL++
Sbjct: 320 GNQIRSYVLQPYTMVKDHRTNAETGNVGSVLDGSLDQFMYAYLRW 364
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
Query: 20 EIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDD 79
E+R S L K + EL+ + FW++ ++ + +Q ++KD + + + + +D
Sbjct: 20 EVRDSLDLDNKLKRIDELDKSMEEPGFWEDPEKSAKIVQLAKNLKDTVQSYQELERQYED 79
Query: 80 AVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAG 139
++++ E D L+ E +++E ++L+ + LLSG YD + A++ + AGAG
Sbjct: 80 IGVMIEMGNE--ENDPSLVPEVEEMLREFKESLESMRINTLLSGEYDSDNAILRLNAGAG 137
Query: 140 GTDA 143
GT++
Sbjct: 138 GTES 141
>gi|15639564|ref|NP_219014.1| peptide chain release factor 2 (prfB) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189025803|ref|YP_001933575.1| peptide chain release factor 2 [Treponema pallidum subsp. pallidum
SS14]
gi|378973087|ref|YP_005221691.1| peptide chain release factor RF2 [Treponema pallidum subsp.
pertenue str. SamoaD]
gi|378974154|ref|YP_005222760.1| peptide chain release factor RF2 [Treponema pallidum subsp.
pertenue str. Gauthier]
gi|378975213|ref|YP_005223821.1| peptide chain release factor RF2 [Treponema pallidum subsp.
pallidum DAL-1]
gi|378982063|ref|YP_005230368.1| peptide chain release factor RF2 [Treponema pallidum subsp.
pertenue str. CDC2]
gi|384422087|ref|YP_005631446.1| peptide chain release factor 2 [Treponema pallidum subsp. pallidum
str. Chicago]
gi|408502444|ref|YP_006869888.1| peptide chain release factor RF2 [Treponema pallidum subsp.
pallidum str. Mexico A]
gi|6093958|sp|O83585.1|RF2_TREPA RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|3322871|gb|AAC65552.1| peptide chain release factor 2 (prfB) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189018378|gb|ACD70996.1| peptide chain release factor 2 [Treponema pallidum subsp. pallidum
SS14]
gi|291059953|gb|ADD72688.1| peptide chain release factor 2 [Treponema pallidum subsp. pallidum
str. Chicago]
gi|374677410|gb|AEZ57703.1| peptide chain release factor RF2 [Treponema pallidum subsp.
pertenue str. SamoaD]
gi|374678480|gb|AEZ58772.1| peptide chain release factor RF2 [Treponema pallidum subsp.
pertenue str. CDC2]
gi|374679549|gb|AEZ59840.1| peptide chain release factor RF2 [Treponema pallidum subsp.
pertenue str. Gauthier]
gi|374680611|gb|AEZ60901.1| peptide chain release factor RF2 [Treponema pallidum subsp.
pallidum DAL-1]
gi|408475807|gb|AFU66572.1| peptide chain release factor RF2 [Treponema pallidum subsp.
pallidum str. Mexico A]
Length = 368
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 159/336 (47%), Gaps = 74/336 (22%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
E +A LE AA FW RA A+ L L ++ + + + D + +L E
Sbjct: 25 EARIATLEAAAAAPDFWSERARAEALLAELKTLRATLEPWRALRRESADLRALYELARE- 83
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDK----------------------- 127
+ DA L E +S+ +++ ++ LT+LL D+
Sbjct: 84 -AQDASLEPELSSLFSDISARFEEASLTRLLHEEVDRLDAFVTIHSGAGGVEACDWAQML 142
Query: 128 -----------------------EGAVISITAGAGGTDA--------------------- 143
EG V S+T G+ A
Sbjct: 143 MRMYTRWAERRSFCVHIVDLLESEGGVKSVTLKICGSHAFGFLKGETGVHRLVRISPFDS 202
Query: 144 ----QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPT 199
TSF+ V P+L ++ ++V I ED+ + R+GG GGQ+VNK ++AVRITH+PT
Sbjct: 203 AARRHTSFTSTYVFPVL-DDHVEVHIRSEDMRVDTYRSGGAGGQHVNKTDSAVRITHLPT 261
Query: 200 GVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVF 259
G+ V C ERSQ++N+ ALS L+A+L +++ E ++ + WG QIR+YVF
Sbjct: 262 GIVVTCQNERSQISNRATALSLLRARLYAYERQKKQQEHQRFASEKKDISWGNQIRSYVF 321
Query: 260 HPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
HPY +VKD R+ ET +I +VMDG LEPFI+SYL++
Sbjct: 322 HPYTMVKDHRSKCETGNIHAVMDGALEPFIRSYLEF 357
>gi|160947120|ref|ZP_02094287.1| hypothetical protein PEPMIC_01052 [Parvimonas micra ATCC 33270]
gi|158446254|gb|EDP23249.1| peptide chain release factor 2 [Parvimonas micra ATCC 33270]
Length = 349
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 164/337 (48%), Gaps = 71/337 (21%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
+ +LE E LE ++ FW++ A+ L + ++K KI T K++D++ +++
Sbjct: 6 ISKLEDEYKNLESQSFKEDFWNDSKSAKSILDNMKNLKFKIETFTSLSRKIEDSIEFLEI 65
Query: 87 T--EEMDSTDAGLLEEAASIIKEL---------------NKAL----------DQFELTQ 119
EE + L+ +I KE N A+ D + T+
Sbjct: 66 LSDEEFMEYEKEALKNIYNIEKEYLSLKLNTLMVGEYDSNNAILEIHAGAGGTDAQDWTE 125
Query: 120 LLSGPY------------------DKEGAVISITAGAGGTDA------------------ 143
+L Y D EG + S+T G +A
Sbjct: 126 MLQRLYTRWINSKGFSFSILDYNSDTEGGIKSVTLKVDGKNAYGFLKGEKGVHRLVRISP 185
Query: 144 -------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITH 196
TSF+ +V P + E + P+ DL I R+GG GGQ+VNK ++AVRITH
Sbjct: 186 YDSSNKRHTSFASVDVFPEIEEITDIEINPK-DLRIDTYRSGGAGGQHVNKTDSAVRITH 244
Query: 197 IPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRN 256
IPTGVTV C ERSQ+ N+ A+ +L AKLL+I +E+ +I+ I+G + WG QIR+
Sbjct: 245 IPTGVTVSCQSERSQMFNRDTAMRQLIAKLLIIKQEENREKIEDIQGKYSQIAWGSQIRS 304
Query: 257 YVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
YVF PY LVKD RTG+ET ++ SVM+G ++ FI YL
Sbjct: 305 YVFQPYTLVKDHRTGYETGNVESVMNGNIDEFINQYL 341
>gi|423316320|ref|ZP_17294225.1| peptide chain release factor 2 [Bergeyella zoohelcum ATCC 43767]
gi|405583881|gb|EKB57811.1| peptide chain release factor 2 [Bergeyella zoohelcum ATCC 43767]
Length = 370
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 108/163 (66%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF V PL+ ++++++ I D+ RA G GGQNVNKVET
Sbjct: 195 LVRISPFDSNAKRHTSFVSVYVYPLV-DDTIEININPADISFETMRASGAGGQNVNKVET 253
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVR+ H PTG+ + +E RSQL NK KAL LK++L I E+R +I + +K EW
Sbjct: 254 AVRLRHAPTGIIIENSESRSQLQNKEKALQLLKSRLYEIELEERMKARNEIEANKMKIEW 313
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYV HPYKLVKDVR+GHETSD+ VM+G+L PF+K++L
Sbjct: 314 GSQIRNYVMHPYKLVKDVRSGHETSDVDGVMNGDLTPFLKAFL 356
>gi|406672993|ref|ZP_11080218.1| peptide chain release factor 2 [Bergeyella zoohelcum CCUG 30536]
gi|405587537|gb|EKB61265.1| peptide chain release factor 2 [Bergeyella zoohelcum CCUG 30536]
Length = 370
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 108/163 (66%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF V PL+ ++++++ I D+ RA G GGQNVNKVET
Sbjct: 195 LVRISPFDSNAKRHTSFVSVYVYPLV-DDTIEININPADISFETMRASGAGGQNVNKVET 253
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVR+ H PTG+ + +E RSQL NK KAL LK++L I E+R +I + +K EW
Sbjct: 254 AVRLRHAPTGIIIENSESRSQLQNKEKALQLLKSRLYEIELEERMKARNEIEANKMKIEW 313
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYV HPYKLVKDVR+GHETSD+ VM+G+L PF+K++L
Sbjct: 314 GSQIRNYVMHPYKLVKDVRSGHETSDVDGVMNGDLTPFLKAFL 356
>gi|225375950|ref|ZP_03753171.1| hypothetical protein ROSEINA2194_01587 [Roseburia inulinivorans DSM
16841]
gi|225212203|gb|EEG94557.1| hypothetical protein ROSEINA2194_01587 [Roseburia inulinivorans DSM
16841]
Length = 338
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 107/152 (70%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF +VMP + EE +D++I E+DL I R+ G GGQ++NK +A+RITH+PTG+ V
Sbjct: 174 QTSFVSCDVMPDI-EEDLDIEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK KA+ LKAKL ++ E++ A + IRG+ + WG QIR+YV PY
Sbjct: 233 QCQNERSQHQNKDKAMQMLKAKLYLLKEQENAEKAAGIRGEVTEIGWGNQIRSYVMQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
+VKD RTG ET ++ SVMDG+++ FI YLK+
Sbjct: 293 MVKDHRTGVETGNVDSVMDGKIDLFINGYLKW 324
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
D FW++ +Q ++ L +KD + T+ DD T++++ E DA L+ E
Sbjct: 3 DGDFWNDPVVSQNKMKTLKSMKDDVATYEKLATQFDDIETLIEMGYE--ENDASLIPEIE 60
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
++ E D + LLSG YD + A++S+ AGAGGT++
Sbjct: 61 EMLNEFVTTFDNIRIKTLLSGEYDGDNAILSLHAGAGGTES 101
>gi|451817487|ref|YP_007453688.1| peptide chain release factor 2 [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451783466|gb|AGF54434.1| peptide chain release factor 2 [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 323
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P L +E D++I +DL I R+GG GGQ+VNK ++AVRITH+PTG+ V
Sbjct: 173 QTSFASMEVLPELTKEQ-DIEIKADDLRIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVV 231
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ AN+ A+ LK+KL+ + E +I+ + GD WG QIR+YVFHPY
Sbjct: 232 QCQNERSQFANRDTAMEMLKSKLVELKERAHKEKIEDLTGDLKDMGWGSQIRSYVFHPYS 291
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ETS++ +VMDG+++ FI +YLK
Sbjct: 292 MVKDHRTNVETSNVTAVMDGDIDMFINAYLK 322
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
++ FWD+ A+E + +KD+I ++K++D + ++ E+ D A E
Sbjct: 3 EAGFWDDIKRAEEVTKKSKSIKDQIEKFDKLRSKVEDVEVLKEIMEDDDEESAN---EII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
I+E+ +D + + LL G YDK A++++ G GGTDA
Sbjct: 60 QSIREVEAEIDDYNMKILLCGEYDKNNAILTLHVGVGGTDAN 101
>gi|295398527|ref|ZP_06808561.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563]
gi|294973250|gb|EFG49043.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563]
Length = 353
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/353 (32%), Positives = 175/353 (49%), Gaps = 78/353 (22%)
Query: 21 IRASAGLQQLEK---ELAELEMKAADSSFWDNRAEAQETL---QALTDVKDKINLLTD-- 72
+ AS GL LEK +LAE E FWD+ +AQ + AL V D+ N L D
Sbjct: 1 MTASGGLFDLEKMEADLAEYEADMVQPGFWDDSEKAQSVIDANNALKKVYDEFNNLADEY 60
Query: 73 ----------------------------FKTKMDDAVTIVKLTEEMDSTDAGLLE----- 99
F+ K+ + L+ E D DA LLE
Sbjct: 61 EELTLLNEMVKEEPDPDLSKELVNRIQAFQAKISAYERNILLSGEYDHNDA-LLEIHPGA 119
Query: 100 -------EAASIIKELNKALDQ--FELTQLLSGPYDKEGAVISITAGAGGTDA------- 143
A+ +++ + DQ +++T L D+ G + S+T G +A
Sbjct: 120 GGTESQDWASMLLRMYQRWADQHDYQVTTLDFQNGDEAG-IKSVTLEIKGLNAYGFLKSE 178
Query: 144 ------------------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 185
TSF+ E+MP+L +++ +++I E D+E+ RA G GGQ++
Sbjct: 179 DGIHRLVRISPFDSNKRRHTSFASVEIMPVL-DQNTEIEIDESDIEMDVFRASGAGGQHI 237
Query: 186 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 245
NK +AVR+TH+PTG+ V +RSQ N+ A+ L+AKL + E+ A E+ +IRG+
Sbjct: 238 NKTSSAVRLTHVPTGIVVASQGQRSQFQNRDTAMKMLQAKLAHLLAEKNAKELDEIRGEK 297
Query: 246 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+ WG QIR+YVFHPY +VKD RT +ET+++ VMDG+L+ FI +YLK + S
Sbjct: 298 SEIAWGSQIRSYVFHPYNMVKDHRTDYETANVQGVMDGDLDGFIDAYLKNQLS 350
>gi|259046384|ref|ZP_05736785.1| peptide chain release factor 2 [Granulicatella adiacens ATCC 49175]
gi|259036929|gb|EEW38184.1| peptide chain release factor 2 [Granulicatella adiacens ATCC 49175]
Length = 361
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 110/152 (72%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +V+P + + +D++I +DL++ RA G GGQ++NK +AVRITHIPTG+
Sbjct: 200 HTSFCSVDVVPQM-DGDIDIEINPDDLKVDVYRASGAGGQHINKTSSAVRITHIPTGIVT 258
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ +RSQ N+ +A++ LKAKL + EE++A+E+ IRG+ WG QIRNYVFHPY
Sbjct: 259 QSQAQRSQFKNRDQAMAMLKAKLFQLEEEKKAAELAAIRGEQKDIAWGSQIRNYVFHPYS 318
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
+VKD+R+G+ET +I +VMDG+L+ F+ +YLK+
Sbjct: 319 MVKDLRSGYETGNIGAVMDGDLDSFMDAYLKW 350
>gi|406874332|gb|EKD24310.1| hypothetical protein ACD_81C00056G0001 [uncultured bacterium]
Length = 361
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/151 (54%), Positives = 109/151 (72%), Gaps = 2/151 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDV-QIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVT 202
TSF EVMP LP+ ++ IPE+DL++ FSRAGG GGQNVNKVETAVRITH+PTGV
Sbjct: 211 HTSFCLVEVMPDLPQVDLETFVIPEDDLKVEFSRAGGPGGQNVNKVETAVRITHVPTGVI 270
Query: 203 VRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPY 262
ERSQ+AN++ A++ L+ +L+ + EEQ+A E+ ++ VK EWG QIR+YV +PY
Sbjct: 271 ASSRVERSQMANRMLAMNLLRGRLVKLMEEQQAKEVTDLK-TRVKVEWGSQIRSYVLNPY 329
Query: 263 KLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
K+VKD RTG ETS V+ GEL+ FI + L
Sbjct: 330 KMVKDHRTGVETSQAERVLGGELDEFIDAEL 360
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 28/134 (20%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTK---- 76
+RAS + + ELE + D FW+NR A ++ L + + ++ FK
Sbjct: 19 LRASFDIDTKAIRVKELEAEMGDPDFWNNRENADAKIKELGETNE---MVKKFKEIGEEI 75
Query: 77 ------MDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
MDD EE + TDA + L L++ E +L SG YD + A
Sbjct: 76 EMIELVMDDK------KEEGEITDA---------LAALKAKLNKIETEKLFSGKYDIQSA 120
Query: 131 VISITAGAGGTDAQ 144
V++I AGAGG +++
Sbjct: 121 VVTIQAGAGGNESE 134
>gi|251780395|ref|ZP_04823315.1| peptide chain release factor 2 [Clostridium botulinum E1 str. 'BoNT
E Beluga']
gi|243084710|gb|EES50600.1| peptide chain release factor 2 [Clostridium botulinum E1 str. 'BoNT
E Beluga']
Length = 325
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 105/151 (69%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P L +E D+ I ED+++ RA G GGQ++NK ++AVRITHIPTGV V
Sbjct: 173 QTSFASMEVLPELTKEQ-DIDIRSEDIKVDTYRASGAGGQHINKTDSAVRITHIPTGVVV 231
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ +NK A+ LKAKL+ + E +I+ + G+ WG QIR+YVFHPY
Sbjct: 232 QCQNERSQFSNKDTAMGMLKAKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYN 291
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E S++ +VMDG+L+ FI SYLK
Sbjct: 292 LVKDHRTNVEVSNVTAVMDGDLDLFINSYLK 322
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ A+E + +KDKI + ++K+DD I L E MD D E + I
Sbjct: 6 FWNDTKRAEEITKESKRIKDKIQRVESVQSKLDD---IEVLKEMMDDDDEESAYEIINNI 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
KE+ + +D + + LLSG YDK A++++ G GGTDA
Sbjct: 63 KEIEEEIDNYNMEILLSGEYDKNNAILTLHVGVGGTDAN 101
>gi|83589099|ref|YP_429108.1| peptide chain release factor 2 [Moorella thermoacetica ATCC 39073]
gi|83572013|gb|ABC18565.1| bacterial peptide chain release factor 2 (bRF-2) [Moorella
thermoacetica ATCC 39073]
Length = 330
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 143/228 (62%), Gaps = 10/228 (4%)
Query: 69 LLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKE 128
LL + +D V+L + ++ +AGL ++A+I L K + + Q G +
Sbjct: 108 LLRMYNRWCEDRGYQVELLDYLEGEEAGL--KSATI---LVKGENAYGYLQAEKGVHR-- 160
Query: 129 GAVISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 188
++ I+ TSF+ +V+P + E +V+I +DL+I R+ G GGQ+VNK
Sbjct: 161 --LVRISPFDAAGRRHTSFASVDVIPEV-EADEEVEINPDDLKIDTFRSQGAGGQHVNKT 217
Query: 189 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 248
++AVRITH+PTG+ V C ERSQ AN++ A+ L+A+L + +++ +E+ QIRG+ +
Sbjct: 218 DSAVRITHLPTGIVVTCQNERSQHANRLSAMKILQARLAALKRQEQEAELAQIRGEQREI 277
Query: 249 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
WG QIR+YVFHPY LVKD RTG ET +I +VMDG+++PFI++YL ++
Sbjct: 278 AWGSQIRSYVFHPYSLVKDHRTGVETGNIQAVMDGQIDPFIQAYLHWQ 325
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 45 SFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASI 104
FW++RA A+ + LT +K+K+ + ++K D + +L + D L EE A
Sbjct: 5 GFWEDRARAEAVGKRLTYLKEKLARYRELESKCADVRELWQLA--LAEDDHSLEEEIARD 62
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ + ++ L LL+GPYD+ A++S+ GAGGT++Q
Sbjct: 63 LAAVEGKVEGQLLATLLNGPYDRHNAILSLHPGAGGTESQ 102
>gi|357421204|ref|YP_004928653.1| peptide chain release factor 2 [Blattabacterium sp. (Mastotermes
darwiniensis) str. MADAR]
gi|354803714|gb|AER40828.1| peptide chain release factor 2 [Blattabacterium sp. (Mastotermes
darwiniensis) str. MADAR]
Length = 363
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 111/166 (66%), Gaps = 1/166 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
+I I+ + TSFS V PL+ ++ ++V++ D+ R+ G GGQNVNKVET
Sbjct: 197 LIRISPFDNNSKRHTSFSSVYVYPLV-DKKVEVEVKSSDIHWETFRSSGAGGQNVNKVET 255
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
VR+ HIPTG+ + TE RSQ+ N+ KAL LK++L I ++R +I + K EW
Sbjct: 256 GVRLRHIPTGIVIENTESRSQIQNRQKALQLLKSRLFEIELKKRNERKNKIESEKKKIEW 315
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
G QIRNY+ HPYKLVKD+RTG+ET++I SVM+GE++ F+K +L YK
Sbjct: 316 GSQIRNYIMHPYKLVKDLRTGYETTNINSVMNGEIDIFLKKFLMYK 361
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 69/138 (50%), Gaps = 8/138 (5%)
Query: 8 RKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDN-RAEAQETLQALTDVKDK 66
++++++ S ++ I +++++ + + K ++ +FW N + E++ ++ +K
Sbjct: 6 KEEIQSISKKINRIYDLLNIEKIKDFIDNEQKKISNPNFWKNSKKESKNFIKRFNSMKTC 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASI-IKELNKALDQFELTQLLSGPY 125
+ + K +++ I L++E + LE+ I + K LD EL L
Sbjct: 66 MQNFFELKNSLEELEIIFSLSKEEN------LEKELKIQFIKTKKLLDDIELKNLFQDNE 119
Query: 126 DKEGAVISITAGAGGTDA 143
D A++ I++GAGGT++
Sbjct: 120 DYYNAILQISSGAGGTES 137
>gi|343520673|ref|ZP_08757642.1| peptide chain release factor 2 [Parvimonas sp. oral taxon 393 str.
F0440]
gi|343397631|gb|EGV10165.1| peptide chain release factor 2 [Parvimonas sp. oral taxon 393 str.
F0440]
Length = 349
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 164/337 (48%), Gaps = 71/337 (21%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
+ +LE E LE ++ FW++ A+ L + ++K KI T K++D++ +++
Sbjct: 6 ISKLEDEYKNLESQSFKEDFWNDSKSAKSILDNMKNLKFKIETFTCLSRKIEDSIEFLEI 65
Query: 87 T--EEMDSTDAGLLEEAASIIKEL---------------NKAL----------DQFELTQ 119
EE + L+ +I KE N A+ D + T+
Sbjct: 66 LSDEEFMEYEKEALKNIYNIEKEYLSLKLNTLMVGEYDSNNAILEIHAGAGGTDAQDWTE 125
Query: 120 LLSGPY------------------DKEGAVISITAGAGGTDA------------------ 143
+L Y D EG + S+T G +A
Sbjct: 126 MLQRLYTRWINSKGFSFSILDYNSDTEGGIKSVTLKVDGKNAYGFLKGEKGVHRLVRISP 185
Query: 144 -------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITH 196
TSF+ +V P + E + P+ DL I R+GG GGQ+VNK ++AVRITH
Sbjct: 186 YDSSNKRHTSFASVDVFPEIEEITDIEINPK-DLRIDTYRSGGAGGQHVNKTDSAVRITH 244
Query: 197 IPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRN 256
IPTGVTV C ERSQ+ N+ A+ +L AKLL+I +E+ +I+ I+G + WG QIR+
Sbjct: 245 IPTGVTVSCQSERSQMFNRDTAMRQLIAKLLIIKQEENREKIEDIQGKYSQIAWGSQIRS 304
Query: 257 YVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
YVF PY LVKD RTG+ET ++ SVM+G ++ FI YL
Sbjct: 305 YVFQPYTLVKDHRTGYETGNVESVMNGNIDEFINQYL 341
>gi|359410417|ref|ZP_09202882.1| peptide chain release factor 2 [Clostridium sp. DL-VIII]
gi|357169301|gb|EHI97475.1| peptide chain release factor 2 [Clostridium sp. DL-VIII]
Length = 364
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 110/164 (67%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ QTSF+ EV+P L +E D+ I +DL I R+GG GGQ+VNK ++
Sbjct: 201 LVRISPYNANGKRQTSFASMEVLPELTKEQ-DINIKPDDLRIDTYRSGGAGGQHVNKTDS 259
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PTG+ V+C ERSQ ANK A+ LK+KL+ + E +I+ + G+ W
Sbjct: 260 AVRITHLPTGIVVQCQNERSQFANKDTAMEMLKSKLVELKERAHKEKIEDLTGELKDMGW 319
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIR+YVFHPY +VKD RT ETS++ +VMDGE++ FI +YLK
Sbjct: 320 GSQIRSYVFHPYSMVKDHRTNVETSNVTAVMDGEIDMFINAYLK 363
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+EE+ AS LE+EL ELE + ++ FWD+ A+E + +KDKI K+ +
Sbjct: 19 IEEMGASLDRGGLERELHELECQMQEAGFWDDSKRAEEVTKKSKLIKDKIENFDKLKSDI 78
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
+D I L E M+ D E IK + +D + + LLSG YDK A++++ G
Sbjct: 79 ED---IEVLKEIMEEDDEESASEIIQTIKGIEDKIDDYNMKVLLSGEYDKNNAILTLHVG 135
Query: 138 AGGTDAQ 144
GGTDA
Sbjct: 136 VGGTDAN 142
>gi|291522080|emb|CBK80373.1| bacterial peptide chain release factor 2 (bRF-2) [Coprococcus catus
GD/7]
Length = 336
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 113/165 (68%), Gaps = 1/165 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ QTSF+ +VMP + EE +D++I E+DL I R+ G GGQ++NK +
Sbjct: 162 LVRISPFNAAGKRQTSFASCDVMPDI-EEDLDIEINEDDLRIDTYRSSGAGGQHINKTSS 220
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
A+RITH+PT + V+C ERSQ NK KA+ LKAKL ++ +++ ++ IRG+ W
Sbjct: 221 AIRITHLPTNIVVQCQNERSQHMNKDKAMQMLKAKLYLLKQQENQEKLSGIRGEVKDNAW 280
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
G QIR+YV PYKLVKD RTG E+S++ +VMDG+++ FI +YLK+
Sbjct: 281 GSQIRSYVMQPYKLVKDHRTGAESSNVDAVMDGDIDLFINAYLKW 325
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWDN +A +++ L ++KD + +T +D T++++ E DA L+ E +
Sbjct: 7 FWDNADKANNSMKELKNLKDTVEEYHRLETAWEDVETLLEMGYE--ENDASLIPEVQEAM 64
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+ K + + LLS YD + A++++ AGAGGT+A
Sbjct: 65 ADFEKRFEHLRIKTLLSEEYDGDNAIVTLHAGAGGTEA 102
>gi|452993792|emb|CCQ94608.1| Peptide chain release factor 2 [Clostridium ultunense Esp]
Length = 346
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 171/339 (50%), Gaps = 75/339 (22%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L KE+ +LE K+ FW + +AQ+ +Q ++++K + D ++D +++L+
Sbjct: 9 LNKEIEKLEKKSFAEDFWQDSDKAQKIMQKISNLKGAVKEYEDLLNSIEDLEVLIELS-- 66
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY------------------------ 125
++ D + +E ++++ ++F+L+ LL+G Y
Sbjct: 67 LEEEDYHVYKEIKENFEKVSYEAEKFKLSTLLNGEYDKNNAILSIHSGAGGLEAQDWAEM 126
Query: 126 -----------------------DKEGAVISITAGAGGTDA------------------- 143
D EG + S+T G +A
Sbjct: 127 LFRMYKRWAEQKGFRVEILDLLSDTEGGIKSVTMLIKGFNAFGYLKSEKGVHRLVRISPF 186
Query: 144 ------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 197
TSF+ ++ P L ++ MD++I E D++I RA G GGQ+VN ++AVR+THI
Sbjct: 187 DSSNRRHTSFASIDIYPEL-DDDMDIEINESDIKIDTYRASGAGGQHVNTTDSAVRVTHI 245
Query: 198 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 257
PTG+ V+C ERSQ +N++ A+ LKAKL+ + EE++ +I+ ++G + WG QIR+Y
Sbjct: 246 PTGIIVQCQNERSQHSNRLTAMKMLKAKLIQLKEEEQKEKIEDLQGKYTQIAWGSQIRSY 305
Query: 258 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+FHPY LVKD RT E DI VMDG+++ FI YLK K
Sbjct: 306 IFHPYSLVKDHRTEVEIGDIDKVMDGDIDLFINEYLKQK 344
>gi|311747486|ref|ZP_07721271.1| peptide chain release factor 2 [Algoriphagus sp. PR1]
gi|126574844|gb|EAZ79215.1| peptide chain release factor 2 [Algoriphagus sp. PR1]
Length = 315
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 111/163 (68%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ G TSF+ P + ++S+++ I D+E+ SR+GG GGQNVNKVET
Sbjct: 143 LVRISPFDSGGRRHTSFASVYAYPEV-DDSIEIDINPADIELHTSRSGGAGGQNVNKVET 201
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
V++TH PTG+ V C ERSQLAN+ KA+ LK++L + E+R +EI +I ++ ++
Sbjct: 202 KVQLTHKPTGIVVVCQIERSQLANREKAMQMLKSRLFQLEVEKRNAEIAKIESSKLRVDF 261
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYV HPYKLVKD RTGHETSD V+DG L F+K+YL
Sbjct: 262 GSQIRNYVLHPYKLVKDARTGHETSDTQHVLDGGLNEFMKAYL 304
>gi|170755895|ref|YP_001779801.1| peptide chain release factor 2 [Clostridium botulinum B1 str. Okra]
gi|429243946|ref|ZP_19207428.1| peptide chain release factor 2 [Clostridium botulinum CFSAN001628]
gi|169121107|gb|ACA44943.1| peptide chain release factor 2 [Clostridium botulinum B1 str. Okra]
gi|428758866|gb|EKX81257.1| peptide chain release factor 2 [Clostridium botulinum CFSAN001628]
Length = 325
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ E++P L E+ +++I EDL+I RAGG GGQ+VNK E+AVRITHIPTG+ V
Sbjct: 173 QTSFASIEILPELTEDQ-EIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIV 231
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY
Sbjct: 232 QCQNERSQHTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYN 291
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RTG ETS++ SVM+G++ FI YLK
Sbjct: 292 LVKDHRTGAETSNVDSVMNGDINIFITQYLK 322
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FW++ EAQ+ +KDK+ + ++D I+ L E + D + +E
Sbjct: 3 NPNFWNDIKEAQKITSEEKYLKDKLIKYNHLRNTIED---IISLCEMLSEEDDDMKKEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S K + + +D+F++ LLSG YD+ ++++ +G GGTDAQ
Sbjct: 60 SEYKNIKEEIDKFKIETLLSGEYDRNNVIMTLHSGVGGTDAQ 101
>gi|406949410|gb|EKD79906.1| peptide chain release factor 2, programmed frameshift [uncultured
bacterium]
Length = 347
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/151 (53%), Positives = 108/151 (71%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P + E++ DV + +ED+E F RAGG GGQNVNKV TAVR+ H P+G+ +
Sbjct: 194 QTSFALVEVLPAVEEDTPDVVVRDEDVEWQFFRAGGHGGQNVNKVSTAVRLIHKPSGIVI 253
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
++ER Q +N+ + LKAKL IAE +R +EI +G+ A +G QIRNYV HPYK
Sbjct: 254 VSSQERYQQSNRDICMRLLKAKLWEIAEGKRKAEITGAKGEYKVASFGNQIRNYVLHPYK 313
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKDVRTG+ETS SV+DG+L FI++ LK
Sbjct: 314 LVKDVRTGYETSQAESVLDGDLNAFIQAQLK 344
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 76/143 (53%), Gaps = 22/143 (15%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M D N D++ R+EEI QLEK EM++ D FW +A+AQ+ Q L
Sbjct: 1 MSDLVNRLGDLKTKL-RLEEI-------QLEKISLLKEMESGD--FW-GQADAQKKSQRL 49
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+++ D ++ + ++ + DA T ++L +E+D G+ E AL + EL
Sbjct: 50 SEINDLLDTHQEVESAISDAETALELGDEIDKY-VGIAE----------SALSKLELATY 98
Query: 121 LSGPYDKEGAVISITAGAGGTDA 143
LSG +D A++SI AGAGGT+A
Sbjct: 99 LSGRFDALDALLSIHAGAGGTEA 121
>gi|357235903|ref|ZP_09123246.1| peptide chain release factor 2 [Streptococcus criceti HS-6]
gi|356883885|gb|EHI74085.1| peptide chain release factor 2 [Streptococcus criceti HS-6]
Length = 326
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L ++++DV I +ED+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIDVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVSALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RTG+E + + VMDG+++ FI +YLK++
Sbjct: 291 MVKDHRTGYEVAQVDKVMDGDIDGFIDAYLKWR 323
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K + +M++ +L EM DA + E+ +
Sbjct: 6 FWDDNVAAQKTSQELNELKQTYDTFN----QMEELSEETELYLEMLEEDASVQEDLEDTL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 AKLDKMMASYEMTLLLSEPYDNNNAILEIHPGSGGTEAQ 100
>gi|427391491|ref|ZP_18885897.1| peptide chain release factor 2 [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425732134|gb|EKU94946.1| peptide chain release factor 2 [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 394
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 193/374 (51%), Gaps = 85/374 (22%)
Query: 15 SDRVEEIRASAG-------LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI 67
S+ ++ +RA+ G +QL + EL ++AD + WD++ AQE L+ + ++
Sbjct: 23 SENIDRLRATLGQIEAVLNPEQLRARVDELTAQSADPNLWDDQDRAQEVTSQLSHAQAEL 82
Query: 68 NLLTDFKTKMDDAVTIVKLTEEMDSTDAG--------LLEEAASIIKELNK--------- 110
+ LT + ++DD ++++ +E TDA L EE ++ K L++
Sbjct: 83 DKLTGLEERLDDLEALLEIADEEAETDASSAKDLYGELREETTAVEKTLDELQIRTLLSG 142
Query: 111 -------------------ALDQFEL---------------TQLLSGPYDKEGAVISIT- 135
A D E+ T++L+ Y +E + S T
Sbjct: 143 KYDEREAVVTIRSGAGGVDAADFTEMLQRMYLRWGARRGYPTKVLNTSYAEEAGIKSTTF 202
Query: 136 -----------AGAGGTDA-------------QTSFSGAEVMPLLPEESMDVQIPEEDLE 171
AG GT QTSF+ EV+PL+ E++ + IPE D+
Sbjct: 203 EVSAPYAYGTLAGEAGTHRLVRISPFDNQARRQTSFAAVEVIPLI-EQTDHIDIPETDIR 261
Query: 172 ISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAE 231
I R+ G GGQ+VN ++AVRITH+PTG+ V +E+SQ+ N+ A+ L+++LLV+ +
Sbjct: 262 IDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQDEKSQIQNRAAAMRVLQSRLLVLKQ 321
Query: 232 EQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKS 291
E+ E K++RGD VKA WG Q+R+YV PY++VKD+RTG+ET + +V DG+++ FI +
Sbjct: 322 EEEEREKKELRGD-VKASWGDQMRSYVLQPYQMVKDLRTGYETGNTDAVFDGDIDGFIDA 380
Query: 292 YLKYKYSMSLSASD 305
++++ + +A +
Sbjct: 381 EIRWRATGETTAEN 394
>gi|374598101|ref|ZP_09671103.1| bacterial peptide chain release factor 2 (bRF-2) [Myroides odoratus
DSM 2801]
gi|373909571|gb|EHQ41420.1| bacterial peptide chain release factor 2 (bRF-2) [Myroides odoratus
DSM 2801]
Length = 364
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 111/163 (68%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ V PL +++++++I D+ R+ G GGQNVNKVET
Sbjct: 195 LVRISPFDSNAKRHTSFASVYVYPL-ADDTIEIEISPSDISWETMRSSGAGGQNVNKVET 253
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVR+ H PTG+ + +E RSQL NKIKA+ LK++L I +++ + +I + K EW
Sbjct: 254 AVRLRHHPTGIIIENSETRSQLDNKIKAMQLLKSQLYEIELKKKQAMRDEIEANKKKIEW 313
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYV HPYKLVKDVRTGHET+D+ SVMDGE++ F+K+YL
Sbjct: 314 GSQIRNYVMHPYKLVKDVRTGHETTDVDSVMDGEIDAFLKAYL 356
>gi|255987637|ref|YP_001884728.2| peptide chain release factor 2 [Clostridium botulinum B str. Eklund
17B]
gi|255961470|gb|ACD21926.2| peptide chain release factor 2 [Clostridium botulinum B str. Eklund
17B]
Length = 325
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 105/151 (69%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P L +E D+ I ED++I RA G GGQ++NK ++AVRITH+PTGV V
Sbjct: 173 QTSFASMEVLPELTKEQ-DIDIRSEDIKIDTYRASGAGGQHINKTDSAVRITHLPTGVVV 231
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ +NK A+ LKAKL+ + E +I+ + G+ WG QIR+YVFHPY
Sbjct: 232 QCQNERSQFSNKDTAMGMLKAKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYN 291
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E S++ +VMDG+L+ F+ SYLK
Sbjct: 292 LVKDHRTNVEVSNVTAVMDGDLDLFVNSYLK 322
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ A+E + +KDKI + ++K+DD I L E MD D E + I
Sbjct: 6 FWNDTKRAEEITKESKRIKDKIQRVESVRSKLDD---IEVLKEIMDDDDEESAYEIINNI 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
KE+ + +D + + LLSG YDK A++++ G GGTDA
Sbjct: 63 KEIEEEIDNYNMEILLSGEYDKNNAILTLHVGVGGTDAN 101
>gi|160941606|ref|ZP_02088937.1| hypothetical protein CLOBOL_06506 [Clostridium bolteae ATCC
BAA-613]
gi|158435500|gb|EDP13267.1| hypothetical protein CLOBOL_06506 [Clostridium bolteae ATCC
BAA-613]
Length = 339
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 111/164 (67%), Gaps = 4/164 (2%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF +VMP + EE +D+++ +D+ + R+ G GGQ++NK +A+RITH PTG+ V
Sbjct: 174 QTSFVSCDVMPNI-EEDIDIEVNPDDIRVDTYRSSGAGGQHINKTSSAIRITHFPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ NK KA+ LKAKLL++ +E++A++ IRGD WG QIR+YV PY
Sbjct: 233 TCQNERSQFQNKEKAMQMLKAKLLMVKQEEQAAKAAGIRGDVKDIGWGSQIRSYVLQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDAN 307
+VKD RTG E+ ++ +V+DG ++ FI +YL++ MSL D N
Sbjct: 293 MVKDHRTGEESGNVDAVLDGAIDNFISAYLRW---MSLGCPDKN 333
>gi|423076128|ref|ZP_17064842.1| peptide chain release factor 2 [Desulfitobacterium hafniense DP7]
gi|361852945|gb|EHL05143.1| peptide chain release factor 2 [Desulfitobacterium hafniense DP7]
Length = 314
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 108/151 (71%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + E++ ++QIP EDL++ RA G GGQ+VNK +AVRITH+PTG+ V
Sbjct: 158 HTSFASVDVIPEVMEDNAEIQIPPEDLKVDTYRASGAGGQHVNKTSSAVRITHLPTGIVV 217
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ ERSQ+ N+ L L+AKLL + +Q+ EI +IRG+ + WG QIR+YVFHPY
Sbjct: 218 QSQSERSQIQNRAYCLRILQAKLLELKRKQQEDEISEIRGEQQEIAWGSQIRSYVFHPYN 277
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET++ +VMDGE++ FI +YL+
Sbjct: 278 MVKDHRTNEETANTGAVMDGEIDQFIAAYLQ 308
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Query: 57 LQALTDVKDKINLLTDFKTKMDDAVTIVKL-TEEMDSTDAGLLEEAASIIKELNKALDQF 115
+Q L+ ++K+ + ++DD +T+ ++ EE D + LEE I L + LD
Sbjct: 1 MQELSYQQEKVKTYYTLQQQLDDLLTLYQMAVEEKDESLEPELEEG---ILALQQRLDGL 57
Query: 116 ELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL LLSGPYD+ A++++ AGAGGT+AQ
Sbjct: 58 ELEILLSGPYDRNNAIVTLHAGAGGTEAQ 86
>gi|89897615|ref|YP_521102.1| hypothetical protein DSY4869 [Desulfitobacterium hafniense Y51]
gi|89337063|dbj|BAE86658.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 315
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 108/151 (71%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + E++ ++QIP EDL++ RA G GGQ+VNK +AVRITH+PTG+ V
Sbjct: 159 HTSFASVDVIPEVMEDNAEIQIPPEDLKVDTYRASGAGGQHVNKTSSAVRITHLPTGIVV 218
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ ERSQ+ N+ L L+AKLL + +Q+ EI +IRG+ + WG QIR+YVFHPY
Sbjct: 219 QSQSERSQIQNRAYCLRILQAKLLELKRKQQEDEISEIRGEQQEIAWGSQIRSYVFHPYN 278
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET++ +VMDGE++ FI +YL+
Sbjct: 279 MVKDHRTNEETANTGAVMDGEIDQFIAAYLQ 309
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Query: 57 LQALTDVKDKINLLTDFKTKMDDAVTIVKL-TEEMDSTDAGLLEEAASIIKELNKALDQF 115
+Q L+ ++K+ + ++DD +T+ ++ EE D + LEE I L + LD
Sbjct: 2 MQELSYQQEKVKTYYTLQQQLDDLLTLYQMAVEEKDESLEPELEEG---ILALQQRLDGL 58
Query: 116 ELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL LLSGPYD+ A++++ AGAGGT+AQ
Sbjct: 59 ELEILLSGPYDRNNAIVTLHAGAGGTEAQ 87
>gi|335047542|ref|ZP_08540563.1| peptide chain release factor 2 [Parvimonas sp. oral taxon 110 str.
F0139]
gi|333761350|gb|EGL38905.1| peptide chain release factor 2 [Parvimonas sp. oral taxon 110 str.
F0139]
Length = 349
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 163/337 (48%), Gaps = 71/337 (21%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
+ +LE E LE ++ FW++ A+ L + ++K KI T K+ D+V +++
Sbjct: 6 ISKLEDEYRSLEAQSFKEDFWNDSKSAKSILDNMKNLKFKIETFTCLNQKIVDSVEFLEI 65
Query: 87 T--EEMDSTDAGLLEEAASIIKEL---------------NKAL----------DQFELTQ 119
EE + L+ +I KE N A+ D + T+
Sbjct: 66 LSDEEFMEYEKEALKNILNIEKEYLSLKLNTLMVGEYDSNNAILEIHAGAGGTDAQDWTE 125
Query: 120 LLSGPY------------------DKEGAVISITAGAGGTDA------------------ 143
+L Y D EG + S+T G +A
Sbjct: 126 MLQRLYTRWISSKGFSFSILDYNSDTEGGIKSVTLKVEGKNAYGFLKGEKGVHRLVRISP 185
Query: 144 -------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITH 196
TSF+ +V P + E + P+ DL I R+GG GGQ+VNK ++AVRITH
Sbjct: 186 YDSSNKRHTSFASVDVFPEIEEITDIEINPK-DLRIDTYRSGGAGGQHVNKTDSAVRITH 244
Query: 197 IPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRN 256
IPTGVTV C ERSQ+ NK A+ +L AKLL+I +E+ +I+ I+G + WG QIR+
Sbjct: 245 IPTGVTVSCQSERSQMFNKDTAMRQLIAKLLIIKQEENREKIEDIQGKYSQIAWGSQIRS 304
Query: 257 YVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
YVF PY LVKD RTG+ET ++ SVM+G ++ FI YL
Sbjct: 305 YVFQPYTLVKDHRTGYETGNVESVMNGNIDEFINQYL 341
>gi|357056769|ref|ZP_09117798.1| peptide chain release factor 2 [Clostridium clostridioforme
2_1_49FAA]
gi|355379608|gb|EHG26764.1| peptide chain release factor 2 [Clostridium clostridioforme
2_1_49FAA]
Length = 338
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 111/164 (67%), Gaps = 4/164 (2%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF +VMP + EE +D+++ +D+ + R+ G GGQ++NK +A+RITH PTG+ V
Sbjct: 174 QTSFVSCDVMPNI-EEDIDIEVNPDDIRVDTYRSSGAGGQHINKTSSAIRITHFPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ NK KA+ LKAKLL++ +E++A++ IRGD WG QIR+YV PY
Sbjct: 233 TCQNERSQFQNKEKAMQMLKAKLLMVKQEEQAAKAAGIRGDVKDIGWGSQIRSYVLQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDAN 307
+VKD RTG E+ ++ +V+DG ++ FI +YL++ MSL D N
Sbjct: 293 MVKDHRTGEESGNVDAVLDGAIDNFISAYLRW---MSLGCPDKN 333
>gi|440747122|ref|ZP_20926383.1| Peptide chain release factor 2 [Mariniradius saccharolyticus AK6]
gi|436484751|gb|ELP40727.1| Peptide chain release factor 2 [Mariniradius saccharolyticus AK6]
Length = 335
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/150 (52%), Positives = 108/150 (72%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V P + ++++++ I D++ SR+GG GGQNVNKVET V++TH PTG+ V
Sbjct: 176 HTSFASVYVYPEV-DDTIEININPADIDFHTSRSGGAGGQNVNKVETKVQLTHKPTGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQLAN+ KA+ LK++L + E+R +E +I +K ++G QIRNYV HPYK
Sbjct: 235 VCQVERSQLANREKAMQMLKSRLYQMEMEKRNAERAKIESSKMKIDFGSQIRNYVLHPYK 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKD RTG+ETSD+ SV+DGEL FIK+YL
Sbjct: 295 LVKDARTGYETSDVQSVLDGELNDFIKAYL 324
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 69/135 (51%), Gaps = 4/135 (2%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E ++ FW++ AEA++ ++ ++ + T +++ +D A+ + + E S +
Sbjct: 1 MEAVSSQPDFWNDAAEAEKIMK---QIQVRKGWTTAYES-VDKAIQDLDVLFEFYSAEEV 56
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQTSFSGAEVMPLL 156
EE + K+ K +++ EL ++LS D+ AV+ I GAGGT++ S M ++
Sbjct: 57 TEEEIKAEYKKALKEVEELELKKMLSSEEDQLSAVMEINPGAGGTESNDWASMLMRMYIM 116
Query: 157 PEESMDVQIPEEDLE 171
E ++ E D +
Sbjct: 117 WGEKNGYKVKEVDFQ 131
>gi|336173487|ref|YP_004580625.1| peptide chain release factor 2 [Lacinutrix sp. 5H-3-7-4]
gi|334728059|gb|AEH02197.1| peptide chain release factor 2 [Lacinutrix sp. 5H-3-7-4]
Length = 369
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 120/177 (67%), Gaps = 4/177 (2%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ V PL+ ++S++++I D+EI+ +R+ G GGQNVNKVET
Sbjct: 195 LVRISPFDSNAKRHTSFASVYVYPLV-DDSIEIEINPADIEITTARSSGAGGQNVNKVET 253
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
V++TH P+G+ + C+E RSQ N+ +AL LK++L I +++ S+ + I +K EW
Sbjct: 254 KVQLTHKPSGIQISCSETRSQHDNRSRALQMLKSQLYEIELQKQLSQREDIEAAKMKIEW 313
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDAN 307
G QIRNYV HPYKLVKDVRTG E+ ++ +VMDG++ PF+KSYL SM +++ N
Sbjct: 314 GSQIRNYVMHPYKLVKDVRTGFESGNVDAVMDGDITPFLKSYL---MSMGQQSTNTN 367
>gi|333924707|ref|YP_004498287.1| peptide chain release factor 2 [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333750268|gb|AEF95375.1| Peptide chain release factor 2 [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 375
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 111/161 (68%), Gaps = 1/161 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P++ +E ++V I EDL+I R+GG GGQ+VNK ++AVRITH+PTG+ V
Sbjct: 216 HTSFASVDVLPVVDDE-VEVNIRPEDLKIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVV 274
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ N+ A+ LKAKL+ + ++ E+ +RGD WG QIR+YVFHPY
Sbjct: 275 ACQNERSQTYNRAAAMKLLKAKLIDLELRKKEEELAALRGDQKDIAWGSQIRSYVFHPYS 334
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSAS 304
LVKD RTG E ++ +VMDG ++ FI +YL++K S + +S
Sbjct: 335 LVKDHRTGVEVGNVYAVMDGAIDEFIAAYLRHKASSQVGSS 375
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 77/138 (55%), Gaps = 2/138 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+++E R+E++R S + ++E+ +LE + FWDN +Q+ Q L +KDK
Sbjct: 9 VRRELELLGKRIEDLRVSLDIANQQQEIEKLEHEMTQEGFWDNTEHSQQVTQKLALLKDK 68
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ ++ D +++L E D L +E S + L K + EL +LSGPYD
Sbjct: 69 VEAFNSLESAYQDLEVMLELCNE--EEDPLLDDELKSDLASLTKRVADMELEVMLSGPYD 126
Query: 127 KEGAVISITAGAGGTDAQ 144
+ A++S+ AGAGGT++Q
Sbjct: 127 RNDAILSLHAGAGGTESQ 144
>gi|406920952|gb|EKD58931.1| hypothetical protein ACD_56C00025G0004 [uncultured bacterium]
Length = 302
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/186 (46%), Positives = 123/186 (66%), Gaps = 9/186 (4%)
Query: 121 LSGPY-----DKEGAV---ISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEI 172
+SGPY E V + ++ + QTSF+ AEV+P++ EE +V I +DL I
Sbjct: 116 ISGPYAFGYLQSEAGVHRLVRLSPFNADSLRQTSFAIAEVLPII-EEIAEVNIQPQDLVI 174
Query: 173 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 232
RA G GGQ+VN ++AVRITH+PTGV V C ERSQL NK +A+ L+A++ E
Sbjct: 175 DTYRASGAGGQHVNTTDSAVRITHLPTGVVVTCQSERSQLQNKEQAMKVLRARIHQRYLE 234
Query: 233 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 292
++ +E +++RG+ A+WG QIR+YV HPYK+VKD RT HETSD V+DGEL F++S+
Sbjct: 235 EQEAEKQKLRGEYKSADWGNQIRSYVLHPYKMVKDHRTKHETSDAEKVLDGELYEFMESF 294
Query: 293 LKYKYS 298
L++K S
Sbjct: 295 LRWKAS 300
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+++ K + E LL G YDK ++ + +GAGG DAQ
Sbjct: 37 EKIQKEFESLEFKSLLGGQYDKNDVILVLRSGAGGVDAQ 75
>gi|170759975|ref|YP_001785502.1| peptide chain release factor 2 [Clostridium botulinum A3 str. Loch
Maree]
gi|169406964|gb|ACA55375.1| peptide chain release factor 2 [Clostridium botulinum A3 str. Loch
Maree]
Length = 327
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 110/164 (67%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ QTSF+ EV+P L ++ +++I EDL+I RAGG GGQ+VNK E+
Sbjct: 160 LVRISPFNANGKRQTSFASIEVLPELTDDQ-EIEIKSEDLKIDTYRAGGAGGQHVNKTES 218
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITHIPTG+ V+C ERSQ NK A+ LK+KL+ + E +I+ + G+ W
Sbjct: 219 AVRITHIPTGIIVQCQNERSQHTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGW 278
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIR+YVFHPY LVKD RTG ETS++ SVM+G++ FI YLK
Sbjct: 279 GSQIRSYVFHPYNLVKDHRTGAETSNVDSVMNGDINMFITQYLK 322
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FW+N EAQ+ +KDK+ + ++D I+ L E + D + +E
Sbjct: 3 NPNFWNNIKEAQKITSEEKYLKDKLIKYNHLRNTIED---IISLCEMLSEEDDDMKKEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S K + + D+F++ LLSG YD+ ++++ +G GGTDAQ
Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQ 101
>gi|325662438|ref|ZP_08151044.1| peptide chain release factor 2 [Lachnospiraceae bacterium
4_1_37FAA]
gi|331086228|ref|ZP_08335310.1| peptide chain release factor 2 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|325471272|gb|EGC74496.1| peptide chain release factor 2 [Lachnospiraceae bacterium
4_1_37FAA]
gi|330406387|gb|EGG85901.1| peptide chain release factor 2 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 316
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 116/166 (69%), Gaps = 1/166 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ QTSF+ +V+P L E+ +D++I E++L+I RA G GGQ+VNK +
Sbjct: 145 LVRISPFNSANKRQTSFASCDVVPDL-EDDIDIEINEDELKIDTYRASGAGGQHVNKTSS 203
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
A+R+TH+PTG+ V+C ERSQ +NK KA+ LKAKL ++ E+++A ++ IRG+ + +
Sbjct: 204 AIRLTHLPTGIVVQCQNERSQHSNKEKAMQMLKAKLYLLKEQEQAEKVSGIRGEVKEIGF 263
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
G QIR+YV PY LVKD RT E+ ++ SV+DG L+PFI +YLK +
Sbjct: 264 GNQIRSYVMQPYTLVKDHRTNEESGNVTSVLDGNLDPFINAYLKMR 309
>gi|409387622|ref|ZP_11239808.1| Peptide chain release factor 2 [Lactococcus raffinolactis 4877]
gi|399205289|emb|CCK20723.1| Peptide chain release factor 2 [Lactococcus raffinolactis 4877]
Length = 366
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++S++V + + D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 213 HTSFTSVDVMPEL-DDSIEVDVRDADIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ A+ LK+KL + +++ +E+ +++GD WG QIR+YVF PY+
Sbjct: 272 SSTMDRTQYGNRDLAMKMLKSKLYQLEVDKKQAEVDELKGDQADISWGSQIRSYVFMPYQ 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD R+G+ETS I +VMDG+L+ FI +YLK+K
Sbjct: 332 LVKDTRSGYETSQIDNVMDGDLDGFIDAYLKWK 364
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 2/138 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R + D++ R + L +LE+E+A L+ +D SFWD+ AQ+ ++ +K K
Sbjct: 6 IRNQIAQNRDKMVSFRDNLDLDRLEEEIALLDNDMSDPSFWDDNIAAQKVVEQSNQLKAK 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ +DD ++++ EE D + E A+ + +L + +EL LL+ PYD
Sbjct: 66 YETFMTMQAMLDDQEVMLEMLEE--DADEEMQAELATELDKLGAKMQAYELEMLLNQPYD 123
Query: 127 KEGAVISITAGAGGTDAQ 144
A++ I G+GGT++Q
Sbjct: 124 HMNALLEIHPGSGGTESQ 141
>gi|255283235|ref|ZP_05347790.1| peptide chain release factor 2 [Bryantella formatexigens DSM 14469]
gi|255266308|gb|EET59513.1| peptide chain release factor 2 [Marvinbryantia formatexigens DSM
14469]
Length = 334
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 106/152 (69%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF +VMP + EE +D++I EEDL I R+ G GGQ++NK +AVRITH+PT + V
Sbjct: 174 QTSFVSCDVMPDI-EEDLDIEIREEDLRIDTYRSSGAGGQHINKTSSAVRITHLPTNIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK KA+ LKAKL ++ +++ A ++ IRG+ + WG QIR+YV PY
Sbjct: 233 QCQNERSQFQNKDKAMQMLKAKLYLLKQQENAEKVSGIRGEVKEIGWGNQIRSYVMQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
+VKD RT ET ++ SVMDG ++ FI +YLK+
Sbjct: 293 MVKDHRTNAETGNVDSVMDGNIDLFINAYLKW 324
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 16/105 (15%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ +QE+++ L +KD + K + ++ T++++ E E AS+I
Sbjct: 6 FWDDPESSQESMKTLKALKDDVETYAVLKEQYEEIETLIEMAYE---------ENDASLI 56
Query: 106 KELNKALDQF-------ELTQLLSGPYDKEGAVISITAGAGGTDA 143
E+ + LD F + LLSG YDK A++++ AGAGGT++
Sbjct: 57 LEIQETLDSFIATFENIRIRTLLSGEYDKNDAIVTLHAGAGGTES 101
>gi|366089975|ref|ZP_09456341.1| Bacterial peptide Chain Release Factor 2 [Lactobacillus acidipiscis
KCTC 13900]
Length = 333
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 159/327 (48%), Gaps = 74/327 (22%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ SFWDN +AQ + +K K + + +DD +++L E D +D + E+
Sbjct: 2 AEPSFWDNSQKAQTVIDENNTLKTKYDNFNSLQENVDDLEVLLELAE-ADPSDNEITEDL 60
Query: 102 ASIIKELNKALDQFELTQLLSGP-----------------------------YDK----- 127
AS + K ++Q++LT LL+G YD+
Sbjct: 61 ASKYAAIQKQMEQYQLTLLLNGQYDKNNAILEIHPGAGGTESQDWGSMLLRMYDRWAEQH 120
Query: 128 -------------EGAVISITAGAGGTDA-------------------------QTSFSG 149
E + S+T GT+A TSF+
Sbjct: 121 DFKVETVDYQEGDEAGIKSVTLLISGTNAYGYLRSEKGVHRLVRISPFDSAGRRHTSFAS 180
Query: 150 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 209
VMP L ++ +++++ ED+++ R+ G GGQ++NK +AVR+ HIPTG+ +R
Sbjct: 181 VNVMPELSDD-VEIELRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHIPTGIVTSSQAQR 239
Query: 210 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 269
SQ NK A +KAKL + E++ E I+G+ + WG QIR+YVFHPY +VKD R
Sbjct: 240 SQFQNKATAEKMMKAKLYQMEMEKKEQEKADIQGEQMDIGWGSQIRSYVFHPYSMVKDHR 299
Query: 270 TGHETSDIVSVMDGELEPFIKSYLKYK 296
T +ET +I +VMDGEL+ FI +YL++K
Sbjct: 300 TNYETGNISAVMDGELDGFINAYLQWK 326
>gi|168182216|ref|ZP_02616880.1| peptide chain release factor 2 [Clostridium botulinum Bf]
gi|237793493|ref|YP_002861045.1| peptide chain release factor 2 [Clostridium botulinum Ba4 str. 657]
gi|182674541|gb|EDT86502.1| peptide chain release factor 2 [Clostridium botulinum Bf]
gi|229262967|gb|ACQ54000.1| peptide chain release factor 2 [Clostridium botulinum Ba4 str. 657]
Length = 325
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P L ++ +++I EDL+I RAGG GGQ+VNK E+AVRITHIPTG+ V
Sbjct: 173 QTSFASIEVLPELTDDQ-EIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIV 231
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY
Sbjct: 232 QCQNERSQHTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYN 291
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RTG ETS++ SVM+G++ FI YLK
Sbjct: 292 LVKDHRTGAETSNVDSVMNGDINIFITQYLK 322
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FW++ EAQ+ +KDK+ + ++D I+ L E + D + +E
Sbjct: 3 NPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIED---IISLCEMLSEEDDDMKKEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S K + + D+F++ LLSG YD+ ++++ +G GGTDAQ
Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQ 101
>gi|406661561|ref|ZP_11069678.1| Peptide chain release factor 2 [Cecembia lonarensis LW9]
gi|405554600|gb|EKB49678.1| Peptide chain release factor 2 [Cecembia lonarensis LW9]
Length = 315
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 78/150 (52%), Positives = 109/150 (72%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V P++ ++S+++ I D+E+ SR+GG GGQNVNKVET V++TH PTG+ V
Sbjct: 156 HTSFASVYVYPVV-DDSIEIDINPADVELHTSRSGGAGGQNVNKVETKVQLTHKPTGIVV 214
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQLAN+ +A+ LK++L + E+R +E +I +K ++G QIRNYV HPYK
Sbjct: 215 VCQIERSQLANRERAMQMLKSRLYQMEMEKRNAERAKIESGKMKIDFGSQIRNYVLHPYK 274
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
L+KD RTGHETSD+ SV+DG L FIK++L
Sbjct: 275 LIKDARTGHETSDVQSVLDGGLNEFIKAFL 304
>gi|121535512|ref|ZP_01667321.1| peptide chain release factor 2 [Thermosinus carboxydivorans Nor1]
gi|121305931|gb|EAX46864.1| peptide chain release factor 2 [Thermosinus carboxydivorans Nor1]
Length = 332
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 162/331 (48%), Gaps = 77/331 (23%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTI------------- 83
+E K + FWD+ AEAQ+ Q +T +KD I+ +++ D +
Sbjct: 1 MEHKMSAPDFWDDPAEAQKIAQEVTALKDSISQYQQLRSRHSDVAALWQLGMDEGDDSVY 60
Query: 84 --------------------VKLTEEMDSTDAGLLEEAAS---------------IIKEL 108
V LT E D+ +A L A + ++
Sbjct: 61 DEVAAELRALAKDLEQLELTVLLTGEYDANNAILTLHAGAGGTEAQDWAQMLLRMYMRWA 120
Query: 109 NKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA------------------------- 143
K + EL L+G +E + S T G +A
Sbjct: 121 EKRGYKVELLDALAG---EEAGIKSATITVAGRNAYGYLKAEKGVHRLVRISPFDASGRR 177
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP + +++ ++ I DL+I R+GG GGQ+VNK E+AVRITH+PTG+ V
Sbjct: 178 HTSFAAVDVMPEI-DDNTEIVINPADLKIDTFRSGGAGGQHVNKTESAVRITHLPTGIVV 236
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ+ N+ +A+ L+AKL + ++R + ++ GD EWG QIR+YVFHPY
Sbjct: 237 QCQSERSQIQNREQAMRLLRAKLFELERQKREQKKSELAGDYQAIEWGSQIRSYVFHPYN 296
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT ET ++ +VMDGE++ FI++YL+
Sbjct: 297 LVKDHRTNAETGNVQAVMDGEIDLFIEAYLR 327
>gi|347530813|ref|YP_004837576.1| peptide chain release factor 2 [Roseburia hominis A2-183]
gi|345500961|gb|AEN95644.1| peptide chain release factor 2 [Roseburia hominis A2-183]
Length = 339
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 107/152 (70%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF +VMP + EE +DV+I ++DL I R+ G GGQ++NK +A+RITH+PTG+ V
Sbjct: 174 QTSFVSCDVMPDI-EEDLDVEINDDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK KA+ LKAKL ++ +++ A + IRG+ + WG QIR+YV PY
Sbjct: 233 QCQNERSQFQNKDKAMQMLKAKLYLLKQQENAEKAAGIRGEVTEIGWGNQIRSYVMQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
+VKD RTG ET ++ SV+DG+L+ F+ YLK+
Sbjct: 293 MVKDHRTGVETGNVDSVLDGKLDIFMNGYLKW 324
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M+AAD FW++ +Q+ ++ L +KD + T+ +D T++++ E DA L+
Sbjct: 1 MEAAD--FWNDPEVSQKKMKELKSMKDDVATYASLTTQFEDIETLIEMGYE--ENDATLI 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
E ++ E D LLSG YD + A++S+ AGAGGT++
Sbjct: 57 PEIEEMLTEFTTTYDAIRAKTLLSGEYDGDNAIVSLHAGAGGTES 101
>gi|219670742|ref|YP_002461177.1| hypothetical protein Dhaf_4746 [Desulfitobacterium hafniense DCB-2]
gi|219541002|gb|ACL22741.1| hypothetical protein Dhaf_4746 [Desulfitobacterium hafniense DCB-2]
Length = 368
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 108/151 (71%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + E++ ++QIP EDL++ RA G GGQ+VNK +AVRITH+PTG+ V
Sbjct: 212 HTSFASVDVIPEVMEDNAEIQIPPEDLKVDTYRASGAGGQHVNKTSSAVRITHLPTGIVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ ERSQ+ N+ L L+AKLL + +Q+ EI +IRG+ + WG QIR+YVFHPY
Sbjct: 272 QSQSERSQIQNRAYCLRILQAKLLELKRKQQEDEISEIRGEQQEIAWGSQIRSYVFHPYN 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET++ +VMDGE++ FI +YL+
Sbjct: 332 MVKDHRTNEETANTGAVMDGEIDQFIAAYLQ 362
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 85/146 (58%), Gaps = 4/146 (2%)
Query: 4 FYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDV 63
+ +K++E+ R+ ++R S + Q E +++ LE++ FWDN AQ+ +Q L+
Sbjct: 2 IFEWKKELESLEVRLADLRVSLDVPQREDKISILEIELQRPDFWDNPEGAQKVMQELSYQ 61
Query: 64 KDKINLLTDFKTKMDDAVTIVKL-TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
++K+ + ++DD +T+ ++ EE D + LEE I L + LD EL LLS
Sbjct: 62 QEKVKTYYTLQQQLDDMLTLYQMAVEEKDESLEPELEEG---ILALQQRLDGLELEILLS 118
Query: 123 GPYDKEGAVISITAGAGGTDAQTSFS 148
GPYD+ A++++ AGAGGT+AQ S
Sbjct: 119 GPYDRNNAIVTLHAGAGGTEAQDWVS 144
>gi|342218238|ref|ZP_08710860.1| peptide chain release factor 2 [Megasphaera sp. UPII 135-E]
gi|341590673|gb|EGS33909.1| peptide chain release factor 2 [Megasphaera sp. UPII 135-E]
Length = 341
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP LPE+ +D+QI +D+ + + RA G GGQ+VNK +AVR+THIPTG+ V
Sbjct: 180 HTSFTAVDVMPELPED-VDIQINMDDVRVDYFRASGAGGQHVNKTSSAVRMTHIPTGIVV 238
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL NK L L+AKL + +E++A +I G EWG QIR+YVFHPY
Sbjct: 239 QCQNERSQLQNKEMCLKYLRAKLFELEQEKQAQLKAEIGGVHQAIEWGSQIRSYVFHPYN 298
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT ET ++ +VMDG+L+ FI+ YL+
Sbjct: 299 LVKDHRTNVETGNVQAVMDGDLDMFIEGYLQ 329
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+L+++ +D FW++ A+ Q T +K+ + + ++ V L ++ +
Sbjct: 2 DLDIRMSDPDFWNDPERARNISQEATALKEAVEAHYSLIRRAEELYDYVSLA--IEEGEI 59
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
LL E + K+L + +++ E+ LLSG YD A+I+ AGAGGT+AQ
Sbjct: 60 SLLNELETQYKQLLEEVEKQEIRLLLSGEYDHCNAIITFHAGAGGTEAQ 108
>gi|225572941|ref|ZP_03781696.1| hypothetical protein RUMHYD_01132 [Blautia hydrogenotrophica DSM
10507]
gi|225039699|gb|EEG49945.1| peptide chain release factor 2 [Blautia hydrogenotrophica DSM
10507]
Length = 348
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 168/348 (48%), Gaps = 80/348 (22%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKIN---------------------- 68
EK + ELE + FWD+ E+Q+ ++ L +KD +
Sbjct: 5 EKRIEELEREMEAPDFWDDAEESQKKMKELKYMKDDLQTYENLRTQMEDMETLIEMGYEE 64
Query: 69 -----------LLTDFKTKMDDAVTIVKLTEEMDSTDAGL-----------LEEAASIIK 106
+L +F+ DD L+ E DS DA + + A+ + +
Sbjct: 65 NDPDLIPEIQEMLDEFQKSFDDIRVKTLLSGEYDSNDAIVTLHAGAGGTESCDWASMLYR 124
Query: 107 ELNKALDQ----FELTQLLSGPYDKEGAVISITAGAGGTDA------------------- 143
+ D+ E+ L G E + S+T G +A
Sbjct: 125 MYTRWADKKGFSLEVLDYLDGD---EAGIKSVTFEVRGENAYGYLKSEKGVHRLVRISPF 181
Query: 144 ------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 197
QTSF +VMP + EE +DV+I ++D+ + R+ G GGQ++NK +A+RITH+
Sbjct: 182 NAAGKRQTSFVSCDVMPDI-EEDVDVEIRDDDIRVDTYRSSGAGGQHINKTSSAIRITHL 240
Query: 198 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 257
PTG+ V+C ERSQ NK KA+ LKAKL ++ +++ ++ IRG+ + WG QIR+Y
Sbjct: 241 PTGIVVQCQNERSQHMNKDKAMQMLKAKLYLLKQQENEEKLSGIRGEVTEIGWGNQIRSY 300
Query: 258 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASD 305
V PY +VKD RT ET ++ SVMDG ++ FI +YLK+ ++LS D
Sbjct: 301 VMQPYTMVKDHRTSEETGNVDSVMDGNIDLFINAYLKW---IALSKKD 345
>gi|302875854|ref|YP_003844487.1| peptide chain release factor 2 [Clostridium cellulovorans 743B]
gi|302578711|gb|ADL52723.1| peptide chain release factor 2 [Clostridium cellulovorans 743B]
Length = 369
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 168/354 (47%), Gaps = 71/354 (20%)
Query: 10 DVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK--- 66
D++ S +EE+ A + +L L ELE +S FWDN AQ +KD+
Sbjct: 10 DIKELSKTIEEMGALLDIPKLTLTLEELEGSMQESGFWDNLERAQSVTARAKGIKDRIDL 69
Query: 67 ----------INLLTDFKTKMDDAVTIVKLTEEM----DSTDAGLLEEAASIIKELNKAL 112
I +L + + +D+ + ++ E+ DS + LE S + N A+
Sbjct: 70 YNNFQSSVEDIKVLIEMAIEENDSSLVTEVYNEISTLSDSVENLRLELMLSGEYDTNNAI 129
Query: 113 ----------DQFELTQLLSGPYDK------------------EGAVISITAGAGGTDA- 143
D + T++L Y + E + S T G A
Sbjct: 130 VTLHSGVGGTDAMDWTEMLLRMYTRWCEKKAFNVETLDLQVGDEAGIKSATLKVTGLYAY 189
Query: 144 ------------------------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGG 179
QTSF+ EV P L ++ +V+I DL++ RA G
Sbjct: 190 GYLKAEKGIHRLVRISPFNANGKRQTSFASLEVTPELRQDQ-NVEINPSDLKVDTYRASG 248
Query: 180 KGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIK 239
GGQ+VNK E+A+RITHIPTG+ V+C ERSQ+ N+ AL+ LK+KL+ + E +I+
Sbjct: 249 AGGQHVNKTESAIRITHIPTGIVVQCQNERSQIQNRETALNMLKSKLVELKERAHKEKIE 308
Query: 240 QIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+ GD WG QIR+YVFHPY +VKD RT + +D+ VMDGEL+ FIK YL
Sbjct: 309 DLTGDLKDMGWGSQIRSYVFHPYTMVKDHRTNIQVNDVYKVMDGELDVFIKGYL 362
>gi|423323561|ref|ZP_17301403.1| peptide chain release factor 2 [Myroides odoratimimus CIP 103059]
gi|404609326|gb|EKB08709.1| peptide chain release factor 2 [Myroides odoratimimus CIP 103059]
Length = 292
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 78/150 (52%), Positives = 107/150 (71%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL +++++++I D+ R+ G GGQNVNKVETAVR+ H PTG+ +
Sbjct: 136 HTSFASVYVYPL-ADDTIEIEISPSDISWETMRSSGAGGQNVNKVETAVRLRHHPTGIII 194
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+E RSQL NKIKA+ LK++L I +++ + +I + K EWG QIRNYV HPYK
Sbjct: 195 ENSETRSQLDNKIKAMQLLKSQLYEIELKKKQAMRDEIEANKKKIEWGSQIRNYVMHPYK 254
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRTGHET+D+ SVMDGE++ F+K+YL
Sbjct: 255 LVKDVRTGHETTDVDSVMDGEIDAFLKAYL 284
>gi|304439754|ref|ZP_07399652.1| peptide chain release factor RF2 [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371741|gb|EFM25349.1| peptide chain release factor RF2 [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 368
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 79/153 (51%), Positives = 105/153 (68%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS +V P L E+ DV I EDL+I R+ G GGQ+VN ++AVRITHIPTGV V
Sbjct: 215 HTSFSSVDVYPEL-EDVEDVDIKPEDLKIDTYRSSGAGGQHVNTTDSAVRITHIPTGVVV 273
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ+ N+ A+ LKAKL+ +A+E++ I+ + G+ + WG QIR+YVF PY
Sbjct: 274 QCQNERSQIQNRETAMKLLKAKLISLAQEEQKEAIEDLSGNYSQIAWGSQIRSYVFQPYT 333
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT E D+ SVMDG L+PFI +YL+ K
Sbjct: 334 MVKDHRTNEEIGDVESVMDGNLDPFINAYLQSK 366
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI-NL--LTDFK 74
V + S + ++ +L +L K + FWD+ AQ+T++ KI NL LTD
Sbjct: 19 VNSLIESMDIDGMKAKLRDLNDKQMEEGFWDDTESAQKTIKEFNHYNRKIENLKSLTDEI 78
Query: 75 TKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISI 134
+ + D + I+ EM+ + + +IK L K + F++ LL+ YD ++ I
Sbjct: 79 SSLKDLLEIM----EMEGDYSSYKDFKDDLIK-LEKHAEDFKIATLLNDKYDDNDVILQI 133
Query: 135 TAGAGGTDAQ 144
AGAGGT+AQ
Sbjct: 134 HAGAGGTEAQ 143
>gi|157149715|ref|YP_001450721.1| peptide chain release factor 2 [Streptococcus gordonii str. Challis
substr. CH1]
gi|189040006|sp|A8AY61.1|RF2_STRGC RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|157074509|gb|ABV09192.1| peptide chain release factor 2 [Streptococcus gordonii str. Challis
substr. CH1]
Length = 364
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 113/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 211 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 269
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 270 QSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYT 329
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E + + VMDG+L+ FI +YLK++
Sbjct: 330 MVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 362
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 4/142 (2%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
D +R+ ++A +++ R S L+ LE+E+A LE K + FWD+ AQ+T Q L +
Sbjct: 2 DISEIRQKIDANREKLASFRGSLDLEGLEEEIAILENKMTEPDFWDDNIAAQKTSQELNE 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+K D++ ++ E DS E + EL K + +E+T LLS
Sbjct: 62 LKQTYENFHQMTDLFDESEILLDFLAEDDSVQE----ELEEKLAELEKMMTSYEMTLLLS 117
Query: 123 GPYDKEGAVISITAGAGGTDAQ 144
PYD A++ I G+GGT+AQ
Sbjct: 118 EPYDNNNAILEIHPGSGGTEAQ 139
>gi|326798108|ref|YP_004315927.1| hypothetical protein [Sphingobacterium sp. 21]
gi|326548872|gb|ADZ77257.1| hypothetical protein Sph21_0678 [Sphingobacterium sp. 21]
Length = 361
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ V PL+ ++++++++ + D+E R+GG GGQNVNKVET
Sbjct: 194 LVRISPFDSNAKRHTSFASVYVYPLV-DDTIEIEVKDSDIEWDTFRSGGAGGQNVNKVET 252
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVR+ H P+G+ ++ E RSQL NK A+ LK++L I +R I G K EW
Sbjct: 253 AVRLHHKPSGIVIKNQESRSQLQNKDNAMRLLKSQLYEIEMRKRMETTAAIEGSKKKIEW 312
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYV HPYKLVKD+RTGHETS+ +V+DGEL+ F+KSYL
Sbjct: 313 GSQIRNYVLHPYKLVKDLRTGHETSNTQAVLDGELDEFLKSYL 355
>gi|221195492|ref|ZP_03568547.1| peptide chain release factor 2 [Atopobium rimae ATCC 49626]
gi|221184679|gb|EEE17071.1| peptide chain release factor 2 [Atopobium rimae ATCC 49626]
Length = 371
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 111/156 (71%), Gaps = 2/156 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EV+P+LP E ++V I DL I A G GGQ VN ++AVRITHIPTGV V
Sbjct: 212 QTSFAGVEVLPVLPAE-IEVDIDPSDLRIDVYHASGPGGQGVNTTDSAVRITHIPTGVVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQL NK A++ L+++L I E+R +E+ ++RG + +G QIR+YV +PY+
Sbjct: 271 TCQNERSQLQNKAAAMNILRSRLYEIEREKREAELDELRGPKHEISFGNQIRSYVLYPYQ 330
Query: 264 LVKDVRTGHETSDIVSVM-DGELEPFIKSYLKYKYS 298
LVKD+RTG ET ++ +V+ DG+L+PFI +Y +++ S
Sbjct: 331 LVKDLRTGEETGNVDAVLDDGDLDPFIIAYHRWRTS 366
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
++A + R++E+ + + + +E+A L +A + FW++ A++T+ L +KD + +
Sbjct: 9 LDALTARLDEVESYLHIDEKREEIASLTQISAKADFWNDADFARQTMARLASLKDDVAGI 68
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
K++DA ++L E + DAGLL E+ + L + L + EL+ + D A
Sbjct: 69 DAAHAKLEDAKAALELGSETE--DAGLLAESEHLADSLARDLSELELSSWFTDELDHGDA 126
Query: 131 VISITAGAGGTDAQ 144
++++ G GG +AQ
Sbjct: 127 IVTVKPGQGGLEAQ 140
>gi|226947396|ref|YP_002802487.1| peptide chain release factor 2 [Clostridium botulinum A2 str.
Kyoto]
gi|226842678|gb|ACO85344.1| peptide chain release factor 2 [Clostridium botulinum A2 str.
Kyoto]
Length = 325
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ E++P L ++ +++I EDL+I RAGG GGQ+VNK E+AVRITHIPTG+ V
Sbjct: 173 QTSFASIEILPELTDDQ-EIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIV 231
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY
Sbjct: 232 QCQNERSQHTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYN 291
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RTG ETS++ SVM+G++ FI YLK
Sbjct: 292 LVKDHRTGAETSNVDSVMNGDINIFITQYLK 322
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FW++ EAQ+ +KDK+ + ++D I+ L E + D + +E
Sbjct: 3 NPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIED---IISLCEMLSEEDDDMKKEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S K + + D+F++ LLSG YD+ ++++ +G GGTDAQ
Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQ 101
>gi|315652552|ref|ZP_07905533.1| peptide chain release factor RF2 [Lachnoanaerobaculum saburreum DSM
3986]
gi|315485181|gb|EFU75582.1| peptide chain release factor RF2 [Lachnoanaerobaculum saburreum DSM
3986]
Length = 351
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 168/346 (48%), Gaps = 72/346 (20%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL---- 86
EK++ EL+ + SFWD+ E+ + ++ +KD + K++ +D ++++
Sbjct: 5 EKKIIELDRAMEEPSFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEMGYEE 64
Query: 87 ----------------TEEMDSTDAGLL----EEAASIIKELNKALDQFELTQLLSGPYD 126
T+E+D+ L ++++ I +LN E S Y
Sbjct: 65 NDESLIPEIEAMLEEFTKEIDALKIATLLTGEYDSSNAIMKLNAGAGGTESCDWCSMLYR 124
Query: 127 -------KEGAVI--------------SITAGAGGTDA---------------------- 143
KEG + S+T G +A
Sbjct: 125 MYTRWAAKEGYTVDVLDILEGDEAGIKSVTLQINGLNAYGYLRSEHGVHRLVRISPFNAA 184
Query: 144 ---QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTG 200
QTSF ++MP + EE +DV I +DL I R+ G GGQ++NK +A+RITHIPTG
Sbjct: 185 GKRQTSFVSCDIMPDI-EEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTG 243
Query: 201 VTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFH 260
V V+C ERSQ NK KA+ LKAKL ++ ++ ++ IRGD WG QIR+YV
Sbjct: 244 VVVQCQNERSQFQNKDKAMQMLKAKLFLLKQQANVEKLSDIRGDVKDIGWGNQIRSYVMQ 303
Query: 261 PYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDA 306
PY +VKD RTG E+ ++ +VMDG+++ FI +YL ++ S+ A +A
Sbjct: 304 PYTMVKDHRTGAESGNVTAVMDGDIDKFIIAYLTWQ-SLGCPARNA 348
>gi|296268776|ref|YP_003651408.1| peptide chain release factor 2 [Thermobispora bispora DSM 43833]
gi|296091563|gb|ADG87515.1| peptide chain release factor 2 [Thermobispora bispora DSM 43833]
Length = 378
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 171/336 (50%), Gaps = 72/336 (21%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT-E 88
L K++AELE +AA W++ +AQ L+ ++ ++N + + +++D + +L E
Sbjct: 29 LRKQIAELEEQAAAPDLWNDPEKAQRVTSRLSHLQGEVNRIEELARRLEDLPVLFELAAE 88
Query: 89 EMDS--------------TDAGLLE------------EAASIIKELNKALDQFELTQLL- 121
E D +D G LE EA I +D + Q+L
Sbjct: 89 EGDQEALAEAERELAKLKSDIGALEVRTLLSGEYDEREALITINAQAGGVDAADWAQMLL 148
Query: 122 -----------------SGPYDKEGAVISIT------------AGAGGTDA--------- 143
Y +E + S+T G GT
Sbjct: 149 RMYLRWAERKGYPTEIYDTSYAEEAGIKSVTFTVKAPYAYGTLKGEHGTHRLVRISPFDN 208
Query: 144 ----QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPT 199
QTSF+G +VMP++ E++ D++I E+++ I R+ G GGQ VN ++AVRITH+PT
Sbjct: 209 QARRQTSFAGVDVMPVV-EQTDDIEINEDEIRIDVYRSSGPGGQGVNTTDSAVRITHLPT 267
Query: 200 GVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVF 259
G+ V C ERSQL N+ A++ LKAKLL ++ A + ++RG+ + WG QIRNYV
Sbjct: 268 GIVVSCQNERSQLQNRATAMAVLKAKLLERKRQEEAQAMAELRGETTTS-WGTQIRNYVL 326
Query: 260 HPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
HPY++VKD+RTG E+ + +V+DG+L+ FI++ +++
Sbjct: 327 HPYQIVKDLRTGVESGNPTAVLDGDLDQFIEAEIRW 362
>gi|262283020|ref|ZP_06060787.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Streptococcus
sp. 2_1_36FAA]
gi|262261272|gb|EEY79971.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Streptococcus
sp. 2_1_36FAA]
Length = 347
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 113/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 194 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 252
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 253 QSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYT 312
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E + + VMDG+L+ FI +YLK++
Sbjct: 313 MVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 345
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L+ LE+E+A LE K + FWD+ AQ+T Q L ++K D++ ++
Sbjct: 9 LEGLEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTDLFDESEILLDF 68
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E DS E + EL K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 69 LAEDDSVQE----ELEEKLAELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQ 122
>gi|372284517|emb|CCF02797.1| Peptide chain release factor 2; programmed frameshift-containing
[Streptococcus macedonicus ACA-DC 198]
Length = 364
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS EVMP L +++++V I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 211 HTSFSSVEVMPEL-DDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 269
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ I+GD + WG QIR+YVF PY
Sbjct: 270 ASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDAIKGDKKEITWGSQIRSYVFTPYT 329
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RTG+E + + VMDG+++ FI +YLK++
Sbjct: 330 MVKDHRTGYEVAQVDKVMDGDIDGFIDAYLKWR 362
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 4/138 (2%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+ + +++ R S L +LE+++A LE K + FW++ AQ+T Q L +K
Sbjct: 6 IRQKIVENQEKLTSFRRSLDLDRLEEDIALLENKMTEPDFWNDNIAAQKTSQELNGLKQT 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + D+ +++ +E DS A L E +++L+K + +E T LLS PYD
Sbjct: 66 YETFNEMQELSDETELYLEMLDEDDSVQAELEES----LEKLDKIMTSYETTLLLSEPYD 121
Query: 127 KEGAVISITAGAGGTDAQ 144
A++ I G+GGT+AQ
Sbjct: 122 HNNAILEIHPGSGGTEAQ 139
>gi|407472789|ref|YP_006787189.1| peptide chain release factor PrfB [Clostridium acidurici 9a]
gi|407049297|gb|AFS77342.1| peptide chain release factor PrfB [Clostridium acidurici 9a]
Length = 328
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 151/323 (46%), Gaps = 75/323 (23%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+ LQ + KDK+ + +++ ++L E + D + +E I
Sbjct: 5 FWNDSENAQKILQEIKFKKDKVTEYDEIVNSIEEVEFTIELLNECEDDD--ICKELERKI 62
Query: 106 KELNKALDQFELTQLLSGPY---------------------------------------- 125
L K +D F++ LLSG Y
Sbjct: 63 SFLEKRVDNFKIATLLSGDYDSNNAILSIHSGAGGLEAQDWAEMLLRMYTRWADHREYTV 122
Query: 126 -------DKEGAVISITAGAGGTDA-------------------------QTSFSGAEVM 153
D EG + S+T G +A TSF+ ++
Sbjct: 123 ETLDILPDTEGGIKSVTILVKGINAYGYLKSEKGVHRLVRISPFDSSGRRHTSFASVDIF 182
Query: 154 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 213
P L +E+++V I DL I R+GG GGQ+VN ++A+RITHIPTGV V+C ERSQ +
Sbjct: 183 PEL-DENVEVDINPNDLRIDTYRSGGAGGQHVNTTDSAIRITHIPTGVVVQCQNERSQHS 241
Query: 214 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 273
NK A+ L AKL+ + E +R I+ ++G + WG QIR+YVFHPY LVKD RT E
Sbjct: 242 NKATAMRMLMAKLIELKETERKETIEDLQGTYNQISWGSQIRSYVFHPYNLVKDHRTNAE 301
Query: 274 TSDIVSVMDGELEPFIKSYLKYK 296
+ VMDG ++ F+ YLKY+
Sbjct: 302 VGNTDRVMDGSIDIFMNEYLKYR 324
>gi|322516704|ref|ZP_08069613.1| peptide chain release factor RF2 [Streptococcus vestibularis ATCC
49124]
gi|322124737|gb|EFX96175.1| peptide chain release factor RF2 [Streptococcus vestibularis ATCC
49124]
Length = 337
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 183 HTSFTSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 241
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 242 ASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYT 301
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RTG+E + + VMDG++E FI +YLK++
Sbjct: 302 MVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 334
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE + + FW++ AQ+T Q L ++K K + + D+ +++ EE
Sbjct: 1 MEEDIALLENRMTEPDFWNDNIAAQKTSQDLNELKMKYETFNNMQELSDETELYLEMLEE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
DS + EE +++L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 DDS----IQEELEETLEKLDKIMTSYEMTLLLSEPYDHSNAILEIHPGSGGTEAQ 111
>gi|228477420|ref|ZP_04062056.1| peptide chain release factor 2 [Streptococcus salivarius SK126]
gi|340398917|ref|YP_004727942.1| peptide chain release factor 2 [Streptococcus salivarius CCHSS3]
gi|387761386|ref|YP_006068363.1| peptide chain release factor 2 [Streptococcus salivarius 57.I]
gi|387784070|ref|YP_006070153.1| peptide chain release factor 2 [Streptococcus salivarius JIM8777]
gi|418017896|ref|ZP_12657452.1| peptide chain release factor 2 [Streptococcus salivarius M18]
gi|421452340|ref|ZP_15901701.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus
salivarius K12]
gi|228250855|gb|EEK10043.1| peptide chain release factor 2 [Streptococcus salivarius SK126]
gi|338742910|emb|CCB93418.1| bacterial peptide chain release factor 2 (BRF-2) [Streptococcus
salivarius CCHSS3]
gi|338744952|emb|CCB95318.1| peptide chain release factor 2 [Streptococcus salivarius JIM8777]
gi|339292153|gb|AEJ53500.1| peptide chain release factor 2 [Streptococcus salivarius 57.I]
gi|345526745|gb|EGX30056.1| peptide chain release factor 2 [Streptococcus salivarius M18]
gi|400182771|gb|EJO17033.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus
salivarius K12]
Length = 337
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 183 HTSFTSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 241
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 242 ASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYT 301
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RTG+E + + VMDG++E FI +YLK++
Sbjct: 302 MVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 334
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE + + FW++ AQ+T Q L ++K K + + D+ +++ EE
Sbjct: 1 MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETELYLEMLEE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
DS E +++L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 DDSVQE----ELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 111
>gi|419718187|ref|ZP_14245519.1| peptide chain release factor 2 [Lachnoanaerobaculum saburreum
F0468]
gi|383305632|gb|EIC96985.1| peptide chain release factor 2 [Lachnoanaerobaculum saburreum
F0468]
Length = 337
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 109/163 (66%), Gaps = 2/163 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF ++MP + EE +DV I +DL I R+ G GGQ++NK +A+RITHIPTGV V
Sbjct: 174 QTSFVSCDIMPDI-EEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK KA+ LKAKL ++ ++ ++ IRGD WG QIR+YV PY
Sbjct: 233 QCQNERSQFQNKDKAMQMLKAKLFLLKQQANVEKLSDIRGDVKDIGWGNQIRSYVMQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDA 306
+VKD RTG E+ ++ +VMDG+++ FI +YL ++ S+ A +A
Sbjct: 293 MVKDHRTGAESGNVTAVMDGDIDKFIIAYLTWQ-SLGCPARNA 334
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 45 SFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASI 104
SFWD+ E+ + ++ +KD + K++ +D ++++ E D L+ E ++
Sbjct: 5 SFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEMGYE--ENDESLIPEIEAM 62
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
++E K +D ++ LL+G YD A++ + AGAGGT++
Sbjct: 63 LEEFTKEIDALKIATLLTGEYDSSNAIMKLNAGAGGTES 101
>gi|374583718|ref|ZP_09656812.1| peptide chain release factor 2 [Desulfosporosinus youngiae DSM
17734]
gi|374419800|gb|EHQ92235.1| peptide chain release factor 2 [Desulfosporosinus youngiae DSM
17734]
Length = 368
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 109/151 (72%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + E++ ++ I EDL I R+GG GGQ+VNK ++A+RITH+PTG+ V
Sbjct: 212 HTSFASVDVIPEVAEDNDEIPIDAEDLRIDTYRSGGAGGQHVNKTDSAIRITHLPTGIVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK A+ L+AKLL + +++ +EI +IRG+ + WG QIR+YVFHPY
Sbjct: 272 QCQSERSQTQNKAAAMRVLQAKLLELKRKEQEAEISEIRGEQQEIAWGSQIRSYVFHPYS 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT ET ++ +VMDGE++ FI ++L+
Sbjct: 332 LVKDHRTNVETGNVSAVMDGEIDAFIAAFLQ 362
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+ +K++E + ++R S + + +++ LE + WD+ AQ+ +Q L+ +
Sbjct: 4 DWKKELETLEMSLADLRVSLDVAKRRDKISALETEFHRPDLWDDPVNAQKIMQELSLHQG 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
K+ + K ++++ T+ +L E D D L + I+ L + + EL LLSGPY
Sbjct: 64 KVKTYEELKQELEETSTLWQLAVEED--DVSLEPDIEQGIEALKQRFEALELELLLSGPY 121
Query: 126 DKEGAVISITAGAGGTDAQ 144
D+ A++++ AGAGGT+AQ
Sbjct: 122 DRNNAILTLHAGAGGTEAQ 140
>gi|55821157|ref|YP_139599.1| peptide chain release factor 2 [Streptococcus thermophilus LMG
18311]
gi|55823068|ref|YP_141509.1| peptide chain release factor 2 [Streptococcus thermophilus
CNRZ1066]
gi|116627872|ref|YP_820491.1| peptide chain release factor 2 [Streptococcus thermophilus LMD-9]
gi|55737142|gb|AAV60784.1| peptide chain release factor 2 [Streptococcus thermophilus LMG
18311]
gi|55739053|gb|AAV62694.1| peptide chain release factor 2 [Streptococcus thermophilus
CNRZ1066]
gi|116101149|gb|ABJ66295.1| bacterial peptide chain release factor 2 (bRF-2) [Streptococcus
thermophilus LMD-9]
Length = 337
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 183 HTSFTSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 241
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 242 ASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYT 301
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RTG+E + + VMDG++E FI +YLK++
Sbjct: 302 MVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 334
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE + + FW++ AQ+T Q L ++K K + K D+ +++ EE
Sbjct: 1 MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMKELSDETELYLEMLEE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
DS E +++L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 DDSVQE----ELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 111
>gi|256842745|ref|ZP_05548233.1| peptide chain release factor 2 [Lactobacillus crispatus 125-2-CHN]
gi|256614165|gb|EEU19366.1| peptide chain release factor 2 [Lactobacillus crispatus 125-2-CHN]
Length = 354
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 112/165 (67%), Gaps = 1/165 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ EV+P + ++S+ + I +DL + R+ G GGQ++NK +
Sbjct: 183 LVRISPFDAAKRRHTSFASVEVIPEV-DDSIQIDIDPKDLRVDVYRSSGAGGQHINKTSS 241
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PTG+ +RSQL N+ A++ L+AKL + EE++ + + ++GD + W
Sbjct: 242 AVRITHLPTGIVTTSQAQRSQLQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGW 301
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
G QIR+YVFHPY LVKD+RTGHET+D VMDG+L+PFI SYL++
Sbjct: 302 GSQIRSYVFHPYNLVKDLRTGHETADAQGVMDGKLQPFIYSYLQW 346
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 38 EMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGL 97
E K A FW+N+ +AQ+ + +K+K + +T +D T V+L E D L
Sbjct: 20 ENKMAQPDFWNNQEKAQKLISETNRLKEKRDSFLKLQTSYEDETTAVELLRE--EPDPDL 77
Query: 98 LEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+E + + L + +EL LLSG YD A++ I GAGGT+A
Sbjct: 78 QKEVEADLATLQEDFHNYELDLLLSGKYDSHNALMEIHPGAGGTEA 123
>gi|227877191|ref|ZP_03995265.1| peptide chain release factor RF2 [Lactobacillus crispatus JV-V01]
gi|256848945|ref|ZP_05554379.1| peptide chain release factor 2 [Lactobacillus crispatus MV-1A-US]
gi|262045712|ref|ZP_06018676.1| peptide chain release factor 2 [Lactobacillus crispatus MV-3A-US]
gi|293380190|ref|ZP_06626272.1| peptide chain release factor 2 [Lactobacillus crispatus 214-1]
gi|295692545|ref|YP_003601155.1| peptide chain release factor 2 [Lactobacillus crispatus ST1]
gi|423317948|ref|ZP_17295845.1| peptide chain release factor 2 [Lactobacillus crispatus FB049-03]
gi|423321288|ref|ZP_17299160.1| peptide chain release factor 2 [Lactobacillus crispatus FB077-07]
gi|227863245|gb|EEJ70690.1| peptide chain release factor RF2 [Lactobacillus crispatus JV-V01]
gi|256714484|gb|EEU29471.1| peptide chain release factor 2 [Lactobacillus crispatus MV-1A-US]
gi|260573671|gb|EEX30227.1| peptide chain release factor 2 [Lactobacillus crispatus MV-3A-US]
gi|290923234|gb|EFE00155.1| peptide chain release factor 2 [Lactobacillus crispatus 214-1]
gi|295030651|emb|CBL50130.1| Peptide chain release factor 2 [Lactobacillus crispatus ST1]
gi|405596284|gb|EKB69629.1| peptide chain release factor 2 [Lactobacillus crispatus FB077-07]
gi|405597327|gb|EKB70600.1| peptide chain release factor 2 [Lactobacillus crispatus FB049-03]
Length = 332
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 112/165 (67%), Gaps = 1/165 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ EV+P + ++S+ + I +DL + R+ G GGQ++NK +
Sbjct: 161 LVRISPFDAAKRRHTSFASVEVIPEV-DDSIQIDIDPKDLRVDVYRSSGAGGQHINKTSS 219
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PTG+ +RSQL N+ A++ L+AKL + EE++ + + ++GD + W
Sbjct: 220 AVRITHLPTGIVTTSQAQRSQLQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGW 279
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
G QIR+YVFHPY LVKD+RTGHET+D VMDG+L+PFI SYL++
Sbjct: 280 GSQIRSYVFHPYNLVKDLRTGHETADAQGVMDGKLQPFIYSYLQW 324
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A FW+N+ +AQ+ + +K+K + +T +D T V+L E D L +E
Sbjct: 2 AQPDFWNNQEKAQKLISETNRLKEKRDSFLKLQTSYEDETTAVELLRE--EPDPDLQKEV 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+ + L + +EL LLSG YD A++ I GAGGT+A
Sbjct: 60 EADLATLQEDFHNYELDLLLSGKYDSHNALMEIHPGAGGTEA 101
>gi|386344808|ref|YP_006040972.1| peptide chain release factor 2 [Streptococcus thermophilus JIM
8232]
gi|339278269|emb|CCC20017.1| peptide chain release factor 2 [Streptococcus thermophilus JIM
8232]
Length = 337
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 183 HTSFTSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 241
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 242 ASTVDRTQYGNRDRAMKMLQAKLYQMDQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYT 301
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RTG+E + + VMDG++E FI +YLK++
Sbjct: 302 MVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 334
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE + + FW++ AQ+T Q L ++K K + K D+ +++ EE
Sbjct: 1 MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMKELSDETELYLEMLEE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
DS E +++L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 DDSVQE----ELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 111
>gi|399023710|ref|ZP_10725764.1| peptide chain release factor 2 [Chryseobacterium sp. CF314]
gi|398082239|gb|EJL72997.1| peptide chain release factor 2 [Chryseobacterium sp. CF314]
Length = 370
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 108/163 (66%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF V PL+ ++++++ I D+ R+ G GGQNVNKVET
Sbjct: 195 LVRISPFDSNAKRHTSFVSVYVYPLV-DDTIEININPADISFETMRSSGAGGQNVNKVET 253
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVR+ H PTG+ + +E RSQL NK KA+ L+++L + E+R +I + +K EW
Sbjct: 254 AVRLRHAPTGIIIENSESRSQLQNKEKAMQLLRSRLYEMELEERMRARNEIEANKMKIEW 313
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYV HPYKLVKDVR+GHETSD+ SVM+G L PF+K++L
Sbjct: 314 GSQIRNYVMHPYKLVKDVRSGHETSDVDSVMNGNLTPFLKAFL 356
>gi|374997883|ref|YP_004973382.1| peptide chain release factor 2 [Desulfosporosinus orientis DSM 765]
gi|357216249|gb|AET70867.1| peptide chain release factor 2 [Desulfosporosinus orientis DSM 765]
Length = 367
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 110/151 (72%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + E++ ++ I EDL I R+GG GGQ+VNK ++A+RITH+PTG+ V
Sbjct: 212 HTSFASVDVIPEVTEDN-EITIDTEDLRIDTYRSGGAGGQHVNKTDSAIRITHLPTGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK+ A+ L+AKLL + +++ +EI +IRG+ + WG QIR+YVFHPY
Sbjct: 271 QCQSERSQTQNKLAAMRVLQAKLLELKRKEQEAEITEIRGEQQEIAWGSQIRSYVFHPYS 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT ET ++ +VMDGE++ FI +YL+
Sbjct: 331 LVKDHRTNVETGNVSAVMDGEIDEFIAAYLQ 361
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 78/139 (56%), Gaps = 2/139 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+ +K++E + + ++R S + ++++ LE + WD+ AQ+ +Q L ++
Sbjct: 4 DWKKELETLTLSLADLRVSLDVANRIEKISALETEFHRPDLWDDPENAQKIMQELALHQN 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
K+ L + + ++++ T+ +L E D D L + A +K L + + EL LLSG Y
Sbjct: 64 KVKLFQELEEELEETATLWQLAMEED--DVSLEGDVAQGVKALYQRFEALELELLLSGQY 121
Query: 126 DKEGAVISITAGAGGTDAQ 144
D+ A++++ AGAGGT+AQ
Sbjct: 122 DRNNAILTLHAGAGGTEAQ 140
>gi|319939454|ref|ZP_08013814.1| peptide chain release factor 2 [Streptococcus anginosus 1_2_62CV]
gi|319811440|gb|EFW07735.1| peptide chain release factor 2 [Streptococcus anginosus 1_2_62CV]
Length = 325
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 113/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L ++++++++ +ED+++ R+GG GGQNVNKV T VR+THIPTG+
Sbjct: 172 HTSFTSVEVMPEL-DDTIEIEVRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVT 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKLLQAKLYQMEQEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RTG+E + + VMDG+L+ FI +YLK++
Sbjct: 291 MVKDHRTGYEVAQVDKVMDGDLDGFIDAYLKWR 323
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 10/102 (9%)
Query: 46 FWDNRAEAQETLQALTDVK---DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
FWD+ AQ+T Q L ++K D +TD D++ ++ E DS EE
Sbjct: 6 FWDDNVAAQKTSQELNELKQTYDNFQQMTDL---FDESEILLDFLAEDDS----FQEELE 58
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ EL + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 59 EKLAELETRMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQ 100
>gi|325264746|ref|ZP_08131475.1| peptide chain release factor 2 [Clostridium sp. D5]
gi|324030038|gb|EGB91324.1| peptide chain release factor 2 [Clostridium sp. D5]
Length = 310
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/153 (50%), Positives = 110/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ +V+P + E+++D++I EE+L I R+GG GGQ+VNK +AVRITH+PTG+ V
Sbjct: 158 QTSFASCDVIPDI-EDNIDIEINEEELRIDTYRSGGAGGQHVNKTSSAVRITHLPTGIVV 216
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK KA+ LKAKL ++ ++++A ++ IRG+ + +G QIR+YV PY
Sbjct: 217 QCQNERSQHMNKDKAMQMLKAKLYLLKQQEQADKVSGIRGEVKEIGFGSQIRSYVMQPYT 276
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RT E S++ VMDG L+PFI +YL K
Sbjct: 277 LVKDHRTNMEISNVNGVMDGNLDPFINAYLSMK 309
>gi|445378412|ref|ZP_21426764.1| peptide chain release factor 2 [Streptococcus thermophilus MTCC
5460]
gi|445392626|ref|ZP_21428488.1| peptide chain release factor 2 [Streptococcus thermophilus MTCC
5461]
gi|444749549|gb|ELW74442.1| peptide chain release factor 2 [Streptococcus thermophilus MTCC
5461]
gi|444749743|gb|ELW74627.1| peptide chain release factor 2 [Streptococcus thermophilus MTCC
5460]
Length = 326
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RTG+E + + VMDG++E FI +YLK++
Sbjct: 291 MVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 323
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K K + K D+ +++ EE DS E +
Sbjct: 6 FWNDNIAAQKTSQELNELKMKYETFNNMKELSDETELYLEMLEEDDSVQE----ELEETL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
++L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 EKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|392428426|ref|YP_006469437.1| peptide chain release factor 2 [Streptococcus intermedius JTH08]
gi|419777353|ref|ZP_14303265.1| peptide chain release factor 2 [Streptococcus intermedius SK54]
gi|423070686|ref|ZP_17059462.1| peptide chain release factor 2 [Streptococcus intermedius F0413]
gi|424787404|ref|ZP_18214170.1| peptide chain release factor 2 [Streptococcus intermedius BA1]
gi|355365242|gb|EHG12966.1| peptide chain release factor 2 [Streptococcus intermedius F0413]
gi|383844833|gb|EID82243.1| peptide chain release factor 2 [Streptococcus intermedius SK54]
gi|391757572|dbj|BAM23189.1| peptide chain release factor 2 [Streptococcus intermedius JTH08]
gi|422113699|gb|EKU17426.1| peptide chain release factor 2 [Streptococcus intermedius BA1]
Length = 325
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 113/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THIPTG+
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVT 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKLLQAKLYQMEQEKKAAEVNSLKGDKKEISWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RTG+E + + VMDG+L+ FI +YLK++
Sbjct: 291 MVKDHRTGYEVAQVDKVMDGDLDGFIDAYLKWR 323
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K ++F +M D +++ + + DA + EE +
Sbjct: 6 FWDDNIAAQKTSQELNELK---QTYSNFH-QMTDLFDELEILLDFLAEDASVQEELEEKL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 DELDKMMGSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|331003438|ref|ZP_08326937.1| peptide chain release factor 2 [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330412484|gb|EGG91873.1| peptide chain release factor 2 [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 337
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 109/163 (66%), Gaps = 2/163 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF ++MP + EE +DV I +DL I R+ G GGQ++NK +A+RITHIPTGV V
Sbjct: 174 QTSFVSCDIMPDI-EEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK KA+ LKAKL ++ ++ ++ IRGD WG QIR+YV PY
Sbjct: 233 QCQNERSQFQNKDKAMQMLKAKLFMLKQQANVEKLSDIRGDVKDIGWGNQIRSYVMQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDA 306
+VKD RTG E+ ++ +VMDG+++ FI +YL ++ S+ A +A
Sbjct: 293 MVKDHRTGAESGNVSAVMDGDIDKFIIAYLTWQ-SLGCPARNA 334
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 45 SFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASI 104
+FWD+ E+ + ++ +KD + K++ +D ++++ E D L+ E ++
Sbjct: 5 TFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEMGYE--ENDESLIPEIEAM 62
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
++E K +D ++ LL+G YD A++ + AGAGGT++
Sbjct: 63 LEEFTKEIDALKIATLLTGEYDDASAIMKLNAGAGGTES 101
>gi|325953656|ref|YP_004237316.1| peptide chain release factor 2 [Weeksella virosa DSM 16922]
gi|323436274|gb|ADX66738.1| peptide chain release factor 2 [Weeksella virosa DSM 16922]
Length = 366
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 114/163 (69%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF A V P++ +E++++ I D+E+ SR+GG GGQNVNKVET
Sbjct: 195 LVRISPFDSNAKRHTSFVSAYVSPMV-DETIEIDINPADIEMQTSRSGGAGGQNVNKVET 253
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
V++TH PTG+ V C ERSQLAN+ +A+ LK++L I +++ + +I + +K EW
Sbjct: 254 KVQLTHKPTGIVVICQIERSQLANRERAMEMLKSELYKIELDKKMAARNEIESNKMKIEW 313
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYV HPYKLVKDVRTG ET ++ +VM+G+++ F+KSYL
Sbjct: 314 GSQIRNYVMHPYKLVKDVRTGTETGNVDAVMNGDIDQFLKSYL 356
>gi|206901574|ref|YP_002251123.1| peptide chain release factor 2 [Dictyoglomus thermophilum H-6-12]
gi|206740677|gb|ACI19735.1| peptide chain release factor 2 [Dictyoglomus thermophilum H-6-12]
Length = 330
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/150 (54%), Positives = 112/150 (74%), Gaps = 2/150 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P LPE +++++ EDL+I RAGG GGQ+VNKVE+AVRITHIPTG+ V
Sbjct: 173 HTSFALVEVIPELPESTIEIR--PEDLKIETFRAGGAGGQHVNKVESAVRITHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ ANK AL LKA+L + E++R +I ++G+ + WG QIR+YVFHPY
Sbjct: 231 QCQNERSQHANKEMALRVLKARLEELEEKKRREKIASLKGEVQEISWGNQIRSYVFHPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKD RTG E ++ +V+DGE++PFI++YL
Sbjct: 291 LVKDHRTGLEIGNVQAVIDGEIDPFIEAYL 320
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 111 ALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+L +FE+ +L P+D+ A++S+ AG GGTDAQ
Sbjct: 68 SLKEFEIEMILQDPHDEANAILSLHAGTGGTDAQ 101
>gi|375085782|ref|ZP_09732405.1| peptide chain release factor 2 [Megamonas funiformis YIT 11815]
gi|374566382|gb|EHR37625.1| peptide chain release factor 2 [Megamonas funiformis YIT 11815]
Length = 330
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 164/327 (50%), Gaps = 75/327 (22%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+ +FWD+ +AQ+ Q L VK ++ + K ++ + ++ M+ D + ++
Sbjct: 2 GEPTFWDDPDQAQKITQELNGVKAGVDKYKNILHKFEEMQILWEMG--MEDKDETVCDDV 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ----------------T 145
+ IKE+N+A++Q EL LLSG YD A++++ AGAGGT+AQ
Sbjct: 60 EAEIKEINEAIEQLELELLLSGKYDANNAILTLHAGAGGTEAQDWTQMLLRMYGRWAERN 119
Query: 146 SFSGAEVMPLLPEESMDVQ----------------------------------------- 164
FS E LLP + V+
Sbjct: 120 GFS-VETADLLPGDEAGVKSVTLLIKGHNAYGYLKSEKGVHRLVRISPFDANSRRHTSFS 178
Query: 165 ----IPE--EDLEISFSRA---------GGKGGQNVNKVETAVRITHIPTGVTVRCTEER 209
+PE +D+E+ + A G GGQ++NK ++AVR+THIPTGV +C ER
Sbjct: 179 ACDVMPEIDDDVEVDINMADVRVDTYRASGAGGQHINKTDSAVRMTHIPTGVVAQCQSER 238
Query: 210 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 269
SQL N+ + L L+A+L + E++ E+ + GD K EWG QIR+YVFHPY LVKD R
Sbjct: 239 SQLQNREQCLRLLRARLFELEMEKKEKELAALEGDQQKIEWGSQIRSYVFHPYNLVKDHR 298
Query: 270 TGHETSDIVSVMDGELEPFIKSYLKYK 296
T ETSD VMDG++ FI+SYL K
Sbjct: 299 TNTETSDTQGVMDGDINKFIESYLHAK 325
>gi|217967791|ref|YP_002353297.1| peptide chain release factor 2 [Dictyoglomus turgidum DSM 6724]
gi|217336890|gb|ACK42683.1| peptide chain release factor 2 [Dictyoglomus turgidum DSM 6724]
Length = 330
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 110/150 (73%), Gaps = 2/150 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P LPE + ++I EDL+I RAGG GGQ+VNKVE+AVRITHIPTG+ V
Sbjct: 173 HTSFALVEVIPELPEST--IEIKPEDLKIETFRAGGAGGQHVNKVESAVRITHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ ANK AL LKA+L + E +R +I ++G+ + WG QIR+YVFHPY
Sbjct: 231 QCQNERSQHANKEMALRVLKARLEELEERKRREKIASLKGEVQEISWGNQIRSYVFHPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKD RTG E ++ +V+DGE++PFI++YL
Sbjct: 291 LVKDHRTGLEIGNVQAVIDGEIDPFIEAYL 320
>gi|148378178|ref|YP_001252719.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC
3502]
gi|148287662|emb|CAL81727.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC
3502]
Length = 325
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 110/164 (67%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ QTSF+ EV+P L ++ +++I EDL+I RAGG GGQ+VNK E+
Sbjct: 160 LVRISPFNANGKRQTSFASIEVLPELTDDQ-EIEIRSEDLKIDTYRAGGAGGQHVNKTES 218
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PTG+ V+C ERSQ NK A+ LK+KL+ + E +I+ + G+ W
Sbjct: 219 AVRITHMPTGIIVQCQNERSQHTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGW 278
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIR+YVFHPY LVKD RTG ETS++ SVM+G++ FI YLK
Sbjct: 279 GSQIRSYVFHPYNLVKDHRTGAETSNVDSVMNGDINIFITQYLK 322
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FW++ EAQ+ +KDK+ + ++D I+ L E + D + +E
Sbjct: 3 NPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIED---IISLCEMLSEEDDDMKKEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S K + + D+F++ LLSG YD+ ++++ + GGTDAQ
Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSEVGGTDAQ 101
>gi|451343997|ref|ZP_21913060.1| peptide chain release factor 2 [Eggerthia catenaformis OT 569 = DSM
20559]
gi|449337194|gb|EMD16359.1| peptide chain release factor 2 [Eggerthia catenaformis OT 569 = DSM
20559]
Length = 371
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 175/370 (47%), Gaps = 87/370 (23%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
+ Y ++ +E A ++E+ SA + L +E+ L +K +S FW+N + A + LTD
Sbjct: 2 ELYEIKSGLEKARLLLDELFISANIDVLNREIEGLTVKTEESDFWNNHSRAAKIYNQLTD 61
Query: 63 VKDKINLLTDFKT------KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFE 116
+K + TD+K+ ++++ VK TE D LEE I KAL +FE
Sbjct: 62 MK---KITTDYKSLKNSYDELEEVYIYVKETE--DKEFQQTLEEDYLIFI---KALSEFE 113
Query: 117 LTQLLSGPYDKEGAVISITAGAGGTDAQ-------------------------------- 144
T L YD A++ I GAGGT++Q
Sbjct: 114 KTLLFDEEYDHNNALLDIHPGAGGTESQDWASMLMRMYIRYGEKKNWKVEVVDYLDGEEA 173
Query: 145 ------TSFSGAEVMPLLPEE-----------------------SMDVQIPE--EDLEIS 173
F+G LL E S+DV +PE +DLE+
Sbjct: 174 GLKSVTLRFTGYNAYGLLKSEKGVHRLVRISPFDSSKRRHTSFASVDV-MPEIDDDLEVR 232
Query: 174 FS---------RAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKA 224
RA G GGQ++NK ++AVRITH+PT V C +RSQ+ NK +A+ LK+
Sbjct: 233 IDPNELRIDTFRASGAGGQHINKTDSAVRITHLPTNTVVSCQSQRSQIQNKEEAMRMLKS 292
Query: 225 KLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGE 284
+L + ++ A + I+G+ EWG QIR+YV HPY LVKD R+ +E+S ++DG+
Sbjct: 293 RLYLQMVQEHAQTLSDIQGEKKAIEWGSQIRSYVLHPYSLVKDNRSNYESSQPKDILDGD 352
Query: 285 LEPFIKSYLK 294
L+ I +YLK
Sbjct: 353 LDDMIYAYLK 362
>gi|421766881|ref|ZP_16203649.1| Peptide chain release factor 2 [Lactococcus garvieae DCC43]
gi|407624677|gb|EKF51412.1| Peptide chain release factor 2 [Lactococcus garvieae DCC43]
Length = 368
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 110/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L +++++V + + D+++ R+GG GGQNVNKV T VR+TH+PTG+ V
Sbjct: 216 HTSFTSVDVMPEL-DDTVEVDVRDADIKMDTFRSGGAGGQNVNKVSTGVRLTHVPTGIVV 274
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ KA++ LK+KL + +++ +E+ ++RGD WG QIR+YVF PY+
Sbjct: 275 ASTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQSDISWGSQIRSYVFMPYQ 334
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RT HET I VMDG+L+ FI +YL++K
Sbjct: 335 LVKDTRTEHETGQIDKVMDGDLDGFIHAYLRWK 367
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R +E+ +VE+ R S L +LE+E+A L+ A+ FW++ AQ+ + +K K
Sbjct: 9 IRNKLESYGQKVEDFRGSLDLDRLEEEIALLDNDMAEPDFWNDNEAAQKVIDESNALKAK 68
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
T +D+ ++++ +E + D + E ++EL K ++ +EL +L+ PYD
Sbjct: 69 YENFMSIATLHEDSEVMLEMLQEEEDED--MQTELEDNVEELGKKIETYELEIMLNQPYD 126
Query: 127 KEGAVISITAGAGGTDAQ 144
A++ I G+GGT++Q
Sbjct: 127 HMNAILEIHPGSGGTESQ 144
>gi|227893185|ref|ZP_04010990.1| peptide chain release factor RF2 [Lactobacillus ultunensis DSM
16047]
gi|227865051|gb|EEJ72472.1| peptide chain release factor RF2 [Lactobacillus ultunensis DSM
16047]
Length = 332
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 113/165 (68%), Gaps = 1/165 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ EV+P + ++S+ + I +DL I R+ G GGQ++NK +
Sbjct: 161 LVRISPFDAAKRRHTSFASVEVIPEV-DDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSS 219
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PTG+ +RSQL N+ A++ L+AKL + EE++ + + ++GD + W
Sbjct: 220 AVRITHLPTGIVTTSQAQRSQLQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGW 279
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
G QIR+YVFHPY LVKD+RTG+ET+D+ VMDG+L+PFI SYL++
Sbjct: 280 GSQIRSYVFHPYNLVKDLRTGYETADVNGVMDGKLQPFIYSYLQW 324
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A FW+++ +AQ+ + +K+K + + +D T ++L E DA L +E
Sbjct: 2 AQPDFWNDQEKAQKLINDNNLLKEKRDSFLKLQKGYEDVSTALELLRE--EPDADLQKET 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+ + L + +EL LLSG YD A++ I GAGGT+A
Sbjct: 60 ENDLANLQEEFHNYELDLLLSGKYDNHNALLEIHPGAGGTEA 101
>gi|255535765|ref|YP_003096136.1| peptide chain release factor 2 [Flavobacteriaceae bacterium
3519-10]
gi|255341961|gb|ACU08074.1| Peptide chain release factor 2 [Flavobacteriaceae bacterium
3519-10]
Length = 370
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 108/163 (66%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF V PL+ ++++++ I D+ R+ G GGQNVNKVET
Sbjct: 195 LVRISPFDSNAKRHTSFVSVYVYPLV-DDTIEININPADISFETMRSSGAGGQNVNKVET 253
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVR+ H PTG+ + +E RSQL NK KA+ L+++L + E+R +I +K EW
Sbjct: 254 AVRLRHAPTGIIIENSESRSQLQNKEKAMQLLRSRLYEMELEERMKARNEIEAGKMKIEW 313
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYV HPYKLVKDVR+GHETSD+ +VM+GEL PF+K++L
Sbjct: 314 GSQIRNYVMHPYKLVKDVRSGHETSDVDAVMNGELTPFLKAFL 356
>gi|322372865|ref|ZP_08047401.1| peptide chain release factor 2 [Streptococcus sp. C150]
gi|419707767|ref|ZP_14235245.1| Peptide chain release factor 2 [Streptococcus salivarius PS4]
gi|321277907|gb|EFX54976.1| peptide chain release factor 2 [Streptococcus sp. C150]
gi|383282479|gb|EIC80465.1| Peptide chain release factor 2 [Streptococcus salivarius PS4]
Length = 337
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 183 HTSFTSVEVMPEL-DDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 241
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 242 ASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYT 301
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RTG+E + + VMDG++E FI +YLK++
Sbjct: 302 MVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 334
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE + + FW++ AQ+T Q L ++K K + + D+ +++ EE
Sbjct: 1 MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETELYLEMLEE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D+ + EE +++L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 ----DSSVQEELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 111
>gi|422821509|ref|ZP_16869702.1| peptide chain release factor RF2 [Streptococcus sanguinis SK353]
gi|324990937|gb|EGC22872.1| peptide chain release factor RF2 [Streptococcus sanguinis SK353]
Length = 325
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 114/155 (73%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWRLS 325
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K D++ ++ E +S E +
Sbjct: 6 FWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDFLAEDESVQG----ELEEKL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 AELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQ 100
>gi|302037377|ref|YP_003797699.1| peptide chain release factor 2 [Candidatus Nitrospira defluvii]
gi|300605441|emb|CBK41774.1| Peptide chain release factor 2 (RF-2) [Candidatus Nitrospira
defluvii]
Length = 377
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 117/186 (62%), Gaps = 9/186 (4%)
Query: 121 LSGPY-----DKEGAV---ISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEI 172
+SGPY E V + I+ TSF+ V P L E+ + V I ++DL +
Sbjct: 178 VSGPYAYGYLKAEAGVHRLVRISPFDANKRRHTSFASVFVYPEL-EDDVQVVIDDKDLRV 236
Query: 173 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 232
RAGG GGQNVNKVETA+RITHIPTG+ V+C ERSQL N+ A+ LKA+L + +
Sbjct: 237 DTFRAGGAGGQNVNKVETAIRITHIPTGIVVQCQNERSQLQNRNGAMKILKARLFEVEQR 296
Query: 233 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 292
++ +E I G+ WG QIR+YVF PY++VKD RTG+E + +VMDGEL+ FI++Y
Sbjct: 297 KKEAEFNAIVGEKKDIAWGSQIRSYVFQPYQMVKDHRTGYEVGQVSAVMDGELDGFIEAY 356
Query: 293 LKYKYS 298
L+ K +
Sbjct: 357 LQRKLT 362
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L ++ EL ++E+K + FW + A + + + +++ D + + +D +++L
Sbjct: 22 LARMTAELNDIEVKTSQPDFWKDTQAAAKVNRRKAALDRELSRWRDTERRQNDIEALLEL 81
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
++S DAGL +E + ++ KA+ QF + LLSG D A+ +I GAGGT++Q
Sbjct: 82 A--LESGDAGLEQELLAELEPFEKAVAQFRIELLLSGELDSSNAIFAIHPGAGGTESQ 137
>gi|288905693|ref|YP_003430915.1| peptide chain release factor 2 [Streptococcus gallolyticus UCN34]
gi|306831789|ref|ZP_07464945.1| peptide chain release factor RF2 [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325978722|ref|YP_004288438.1| peptide chain release factor 1 [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|386338143|ref|YP_006034312.1| peptide chain release factor 2 [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|288732419|emb|CBI13991.1| peptide chain release factor 2 [Streptococcus gallolyticus UCN34]
gi|304425987|gb|EFM29103.1| peptide chain release factor RF2 [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325178650|emb|CBZ48694.1| Peptide chain release factor 1 [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|334280779|dbj|BAK28353.1| peptide chain release factor 2 [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
Length = 336
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS EVMP L +++++V I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 183 HTSFSSVEVMPEL-DDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 241
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 242 ASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 301
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RTG+E + + VMDG+++ FI +YLK++
Sbjct: 302 MVKDHRTGYEVAQVDKVMDGDIDGFIDAYLKWR 334
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 4/115 (3%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE K + FW++ AQ+T Q L +K + + D+ +++ +E
Sbjct: 1 MEEDIALLENKMTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEMLDE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
DS A L E +++L+K + +E+T LLS PYD+ A++ I G+GGT+AQ
Sbjct: 61 DDSVQAELEES----LEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQ 111
>gi|424828125|ref|ZP_18252866.1| peptide chain release factor 2 [Clostridium sporogenes PA 3679]
gi|365979608|gb|EHN15661.1| peptide chain release factor 2 [Clostridium sporogenes PA 3679]
Length = 327
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P L ++ +++I EDL+I RAGG GGQ+VNK E+AVRITHIPTG+ V
Sbjct: 173 QTSFASIEVLPELTDDQ-EIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIV 231
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY
Sbjct: 232 QCQNERSQHTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYN 291
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RTG ETS++ +VM+G++ FI YLK
Sbjct: 292 LVKDHRTGAETSNVDAVMNGDINIFITEYLK 322
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FWD+ EAQ+ +KDK+ D K+ ++D I+ L E + D + +E
Sbjct: 3 NPNFWDDIKEAQKITSEEKYLKDKLIKYNDLKSTIED---IISLCEMLSDDDDDMGKEIL 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S K + + +D+F++ LLSG YD+ ++++ +G GGTDAQ
Sbjct: 60 SEYKNIKEEIDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQ 101
>gi|312865919|ref|ZP_07726140.1| peptide chain release factor 2 [Streptococcus downei F0415]
gi|311098323|gb|EFQ56546.1| peptide chain release factor 2 [Streptococcus downei F0415]
Length = 326
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I ++DL++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSIEVMPEL-DDTIEVEIRDDDLKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVSALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RTG+E + + VMDG+++ FI +YLK++
Sbjct: 291 MVKDHRTGYEVAQVDKVMDGDIDGFIDAYLKWR 323
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K + + +++ +++ EE D++ G LEE +
Sbjct: 6 FWDDNITAQKTSQELNELKQTYDTFNQMEELSEESELYLEMLEE-DASVQGDLEET---L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 AKLDKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQ 100
>gi|154483104|ref|ZP_02025552.1| hypothetical protein EUBVEN_00805 [Eubacterium ventriosum ATCC
27560]
gi|149735912|gb|EDM51798.1| peptide chain release factor 2 [Eubacterium ventriosum ATCC 27560]
Length = 286
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 106/152 (69%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ +VMP + EE +DV+I ++D+ I R+ G GGQ++NK +AVRITH PTG+ V
Sbjct: 129 QTSFASCDVMPDI-EEDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAVRITHNPTGIVV 187
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL NK KA+ LKAKL V+ +++ + IRG+ + WG QIR+YV PY
Sbjct: 188 QCQNERSQLQNKDKAMKMLKAKLYVLKKQEEEEKRSGIRGEIKEIGWGSQIRSYVMQPYT 247
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
+VKD RT E +D+ VMDG ++PFI +YLK+
Sbjct: 248 MVKDHRTNQEITDVGKVMDGYIDPFINAYLKW 279
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 6/54 (11%)
Query: 93 TDAGLLEEAASIIKELNKALDQFELTQ---LLSGPYDKEGAVISITAGAGGTDA 143
DA ++EE KE +D+FE T+ LLSG YDK A++ I AGAGGT++
Sbjct: 6 NDASIVEEVEQETKEF---IDEFEKTKIETLLSGEYDKNNAIVKINAGAGGTES 56
>gi|153932889|ref|YP_001382578.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC
19397]
gi|153936079|ref|YP_001386131.1| peptide chain release factor 2 [Clostridium botulinum A str. Hall]
gi|152928933|gb|ABS34433.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC
19397]
gi|152931993|gb|ABS37492.1| peptide chain release factor 2 [Clostridium botulinum A str. Hall]
Length = 325
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 110/164 (67%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ QTSF+ EV+P L ++ +++I EDL+I RAGG GGQ+VNK E+
Sbjct: 160 LVRISPFNANGKRQTSFASIEVLPELTDDQ-EIEIRSEDLKIDTYRAGGAGGQHVNKTES 218
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PTG+ V+C ERSQ NK A+ LK+KL+ + E +I+ + G+ W
Sbjct: 219 AVRITHMPTGIIVQCQNERSQHTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGW 278
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIR+YVFHPY LVKD RTG ETS++ SVM+G++ FI YLK
Sbjct: 279 GSQIRSYVFHPYNLVKDHRTGAETSNVDSVMNGDINIFITQYLK 322
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FW++ EAQ+ +KDK+ + ++D I+ L E + D + +E
Sbjct: 3 NPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIED---IISLCEMLSEEDDDMKKEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S K + + D+F++ LLSG YD+ ++++ +G GGTDAQ
Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQ 101
>gi|312135785|ref|YP_004003123.1| hypothetical protein Calow_1789 [Caldicellulosiruptor owensensis
OL]
gi|311775836|gb|ADQ05323.1| hypothetical protein Calow_1789 [Caldicellulosiruptor owensensis
OL]
Length = 372
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 111/164 (67%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ EV+P + E+ D++I EEDLEI RA G GGQ+VNK E+
Sbjct: 201 LVRISPFDAAGRRHTSFAAVEVLPEV-EDDTDIEIKEEDLEIDTFRASGAGGQHVNKTES 259
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRI HIPTG+ V C ERSQ N+ AL LKAKLL + E++R +I++++G+ + W
Sbjct: 260 AVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQTEIGW 319
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIR+YVF PY LVKD RT E ++ +VMDGE++ FI +YLK
Sbjct: 320 GNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363
>gi|343083705|ref|YP_004773000.1| peptide chain release factor 2 [Cyclobacterium marinum DSM 745]
gi|342352239|gb|AEL24769.1| peptide chain release factor 2 [Cyclobacterium marinum DSM 745]
Length = 367
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 113/163 (69%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ G TSF+ P++ ++++++ I D+E+ SR+GG GGQNVNKVET
Sbjct: 194 LVRISPFDSGGRRHTSFASVYAYPVV-DDTINIDINPSDIELHTSRSGGAGGQNVNKVET 252
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
V++TH PTG+ V C ERSQLAN+ KA+ LK++L + E+R +E ++ ++ ++
Sbjct: 253 KVQLTHKPTGIVVVCQIERSQLANREKAMQMLKSRLYQLEMEKRNAERAKVESGKMRIDF 312
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYV HPYKLVKD RTG+ETSD+ +V+DG L FIK+YL
Sbjct: 313 GSQIRNYVLHPYKLVKDARTGYETSDVQAVLDGGLNEFIKAYL 355
>gi|332654908|ref|ZP_08420650.1| peptide chain release factor 2 [Ruminococcaceae bacterium D16]
gi|332516251|gb|EGJ45859.1| peptide chain release factor 2 [Ruminococcaceae bacterium D16]
Length = 373
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/150 (52%), Positives = 108/150 (72%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EVMP LPE+ ++V+I ED+E+ RA G GGQ+VNK +AVR+ H PTG+ V
Sbjct: 214 QTSFASVEVMPDLPED-VEVEIRPEDIEMQVYRASGAGGQHVNKTSSAVRLIHKPTGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ERSQ NK + L+AKL+ + +++A +I ++G +K EWG QIR+YVF PY+
Sbjct: 273 ASQQERSQFQNKDNCMKMLRAKLVELQMQEKAEKISDLKGVQLKIEWGSQIRSYVFMPYQ 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKD RT +ETS+I +VMDGEL+ FI +YL
Sbjct: 333 LVKDNRTAYETSNIGAVMDGELDGFINAYL 362
>gi|387816401|ref|YP_005676745.1| peptide chain release factor 2 [Clostridium botulinum H04402 065]
gi|322804442|emb|CBZ01992.1| peptide chain release factor 2 [Clostridium botulinum H04402 065]
Length = 325
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 109/164 (66%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ QTSF+ EV+P L ++ +++I EDL+I RAGG GGQ+VNK E+
Sbjct: 160 LVRISPFNANGKRQTSFASIEVLPELTDDQ-EIEIRSEDLKIDTYRAGGAGGQHVNKTES 218
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PTG+ V+C ERSQ NK A+ LK+KL+ + E I+ + G+ W
Sbjct: 219 AVRITHMPTGIIVQCQNERSQHTNKETAMKVLKSKLVELKERSHKERIEDLTGELKDMGW 278
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIR+YVFHPY LVKD RTG ETS++ SVM+G++ FI YLK
Sbjct: 279 GSQIRSYVFHPYNLVKDHRTGAETSNVDSVMNGDINMFITQYLK 322
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FW++ EAQ+ +KDK+ + ++D I+ L E + D + +E
Sbjct: 3 NPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIED---IISLCEMLSEEDDDMKKEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S K + + D+F++ LLSG YD+ A++++ +G GGTDAQ
Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNAIMTLHSGVGGTDAQ 101
>gi|296134253|ref|YP_003641500.1| hypothetical protein TherJR_2767 [Thermincola potens JR]
gi|296032831|gb|ADG83599.1| hypothetical protein TherJR_2767 [Thermincola potens JR]
Length = 371
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + +E+ ++ I DL I R+GG GGQ+VNK ++AVRITHIPTG+ V
Sbjct: 213 HTSFASVDVLPEVDDET-EIVIDPADLRIDTFRSGGAGGQHVNKTDSAVRITHIPTGIVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ +N++KA+ L+A+LL + +++ E+ ++RG+ + WG QIR+YVFHPY
Sbjct: 272 QCQNERSQHSNRLKAMKLLQARLLDLEIKKKEEELNKLRGEQQEIAWGSQIRSYVFHPYS 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RTG ET ++ +VMDGE++ FI +YLK +
Sbjct: 332 LVKDHRTGVETGNVQAVMDGEIDEFIAAYLKSR 364
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 83/139 (59%), Gaps = 1/139 (0%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L++D+ ++R+EE+R S + + + LE K A+ FWDN EAQ+ ++ + D+KD
Sbjct: 4 DLKRDLIELAERLEELRVSLDIAGKVRAVNALEEKTAEQGFWDNPVEAQKVMREINDLKD 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
I L K + DD T+ +L E D D + +E A I+ L ++Q ELT LL Y
Sbjct: 64 TIGLYNTLKRQYDDVYTLWELGMEDDDPDE-IEKEVARDIRHLRHNVEQAELTLLLGDKY 122
Query: 126 DKEGAVISITAGAGGTDAQ 144
DK A+IS+ AGAGGT+AQ
Sbjct: 123 DKGNAIISLHAGAGGTEAQ 141
>gi|168177506|ref|ZP_02612170.1| peptide chain release factor 2 [Clostridium botulinum NCTC 2916]
gi|421839233|ref|ZP_16272865.1| peptide chain release factor 2 [Clostridium botulinum CFSAN001627]
gi|182671219|gb|EDT83193.1| peptide chain release factor 2 [Clostridium botulinum NCTC 2916]
gi|409735367|gb|EKN36957.1| peptide chain release factor 2 [Clostridium botulinum CFSAN001627]
Length = 325
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 109/164 (66%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ QTSF+ EV+P L ++ +++I EDL+I RAGG GGQ+VNK E+
Sbjct: 160 LVRISPFNANGKRQTSFASIEVLPELTDDQ-EIEIRSEDLKIDTYRAGGAGGQHVNKTES 218
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PTG+ V+C ERSQ NK A+ LK+KL+ + E I+ + G+ W
Sbjct: 219 AVRITHMPTGIIVQCQNERSQHTNKETAMKVLKSKLVELKERSHKERIEDLTGELKDMGW 278
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIR+YVFHPY LVKD RTG ETS++ SVM+G++ FI YLK
Sbjct: 279 GSQIRSYVFHPYNLVKDHRTGAETSNVDSVMNGDINMFITQYLK 322
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FW++ EAQ+ +KDK+ + ++D I+ L E + D + +E
Sbjct: 3 NPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIED---IISLCEMLSEEDDDMKKEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S K + + D+F++ LLSG YD+ ++++ +G GGTDAQ
Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQ 101
>gi|163788169|ref|ZP_02182615.1| peptide chain release factor RF-2 [Flavobacteriales bacterium
ALC-1]
gi|159876489|gb|EDP70547.1| peptide chain release factor RF-2 [Flavobacteriales bacterium
ALC-1]
Length = 315
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 110/150 (73%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL+ ++S++++I D+EI+ +R+ G GGQNVNKVET V++ H P+G+ +
Sbjct: 156 HTSFASVYVYPLV-DDSIEIEINPADIEITTARSSGAGGQNVNKVETKVQLHHKPSGIQI 214
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C+E RSQ N+ +A+ LK++L I +++ ++ I +K EWG QIRNYV HPYK
Sbjct: 215 QCSETRSQHDNRTRAMQMLKSQLYEIELQKQMAQRDDIEAGKMKIEWGSQIRNYVMHPYK 274
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVR+ HET ++ +VMDG++EPF+K+YL
Sbjct: 275 LVKDVRSAHETGNVDAVMDGDIEPFLKAYL 304
>gi|422729707|ref|ZP_16786105.1| peptide chain release factor 2 [Enterococcus faecalis TX0012]
gi|315149827|gb|EFT93843.1| peptide chain release factor 2 [Enterococcus faecalis TX0012]
Length = 327
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++++++ I +DL+I RA G GGQ++NK E+AVRITHIPTG V
Sbjct: 174 HTSFCSVDVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+S LKAKL + E++A E +RG+ ++ WG QIR+YVFHPY
Sbjct: 233 ASQAQRSQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEISWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +ET ++ +VMDG+L+ FI +YLK + S
Sbjct: 293 MVKDHRTNYETGNVQAVMDGDLDGFIDAYLKQRLS 327
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+ FWDN AQ+ + +K+K ++D+ + +L +E DA + EE
Sbjct: 2 GEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQE--EYDAEIQEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
I L + L +EL+ LL+ PYD A+I + GAGGT++Q
Sbjct: 60 EERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQ 102
>gi|153938890|ref|YP_001389537.1| peptide chain release factor 2 [Clostridium botulinum F str.
Langeland]
gi|384460618|ref|YP_005673213.1| peptide chain release factor 2 [Clostridium botulinum F str.
230613]
gi|152934786|gb|ABS40284.1| peptide chain release factor 2 [Clostridium botulinum F str.
Langeland]
gi|295317635|gb|ADF98012.1| peptide chain release factor 2 [Clostridium botulinum F str.
230613]
Length = 325
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 109/164 (66%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ QTSF+ E++P L ++ +++I EDL+I RAGG GGQ+VNK E+
Sbjct: 160 LVRISPFNANGKRQTSFASIEILPELTDDQ-EIEIKSEDLKIDTYRAGGAGGQHVNKTES 218
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PTG+ V+C ERSQ NK A+ LK+KL+ + E I+ + G+ W
Sbjct: 219 AVRITHMPTGIIVQCQNERSQHTNKETAMKVLKSKLVELKERSHKERIEDLTGELKDMGW 278
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIR+YVFHPY LVKD RTG ETS++ SVM+G++ FI YLK
Sbjct: 279 GSQIRSYVFHPYNLVKDHRTGAETSNVDSVMNGDINMFITQYLK 322
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FW++ EAQ+ +KDK+ + ++D I+ L E + D + +E
Sbjct: 3 NPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIED---IISLCEMLSEEDDDMKKEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S K + + D+F++ LLSG YD+ ++++ +G GGTDAQ
Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQ 101
>gi|20807024|ref|NP_622195.1| protein chain release factor B [Thermoanaerobacter tengcongensis
MB4]
gi|20515510|gb|AAM23799.1| Protein chain release factor B [Thermoanaerobacter tengcongensis
MB4]
Length = 347
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/187 (45%), Positives = 121/187 (64%), Gaps = 9/187 (4%)
Query: 118 TQLLSGPY-----DKEGAV---ISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEED 169
T L+ GP+ E V + I+ TSF+ EV+P L E+ ++++I ED
Sbjct: 159 TLLIKGPFAYGYLKGEAGVHRLVRISPFDAAGRRHTSFALVEVIPEL-EDDIEIEIRPED 217
Query: 170 LEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVI 229
L+I RA G GGQ+VNK E+AVRITH+PTG+ V C ERSQ+ N+ A+ LKAKLL +
Sbjct: 218 LKIDTFRASGAGGQHVNKTESAVRITHLPTGIVVSCQNERSQIQNRETAMKMLKAKLLDL 277
Query: 230 AEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFI 289
++R +I+ ++G+ +A WG QIR+YVF PY LVKD RT +E ++ +VMDGE++ FI
Sbjct: 278 MMKERKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTNYEEGNVNAVMDGEIDGFI 337
Query: 290 KSYLKYK 296
+YLK K
Sbjct: 338 NAYLKQK 344
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
++ ++KE+ ++E + +D SFW + ++QE + +K+ + ++ +D T+++L
Sbjct: 6 VEGIKKEIEDIEKQMSDPSFWSDLKKSQELSKKQKALKELLEEYESLLSRCEDLYTLIEL 65
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
++ D + EE KEL K ++ ++ LLSGPYDK A++SI AG+GGT+AQ
Sbjct: 66 G--LEEGDESIAEEVEREYKELKKEVENLKIRTLLSGPYDKNNAILSIHAGSGGTEAQ 121
>gi|306833909|ref|ZP_07467033.1| peptide chain release factor RF2 [Streptococcus bovis ATCC 700338]
gi|336064662|ref|YP_004559521.1| peptide chain release factor 2 [Streptococcus pasteurianus ATCC
43144]
gi|304423910|gb|EFM27052.1| peptide chain release factor RF2 [Streptococcus bovis ATCC 700338]
gi|334282862|dbj|BAK30435.1| peptide chain release factor 2 [Streptococcus pasteurianus ATCC
43144]
Length = 325
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS EVMP L +++++V I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFSSVEVMPEL-DDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RTG+E + + VMDG+++ FI +YLK++
Sbjct: 291 MVKDHRTGYEIAQVDKVMDGDIDGFIDAYLKWR 323
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L +K + + D+ +++ +E DS A L E +
Sbjct: 6 FWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEMLDEDDSVQAELEES----L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
++L+K + +E+T LLS PYD+ A++ I G+GGT+AQ
Sbjct: 62 EKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQ 100
>gi|344997089|ref|YP_004799432.1| hypothetical protein Calla_1875 [Caldicellulosiruptor lactoaceticus
6A]
gi|343965308|gb|AEM74455.1| hypothetical protein Calla_1875 [Caldicellulosiruptor lactoaceticus
6A]
Length = 370
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P + E+ D++I EEDLEI RA G GGQ+VNK E+AVRI HIPTG+ V
Sbjct: 212 HTSFAAVEVLPEV-EDDTDIEIKEEDLEIDTFRASGAGGQHVNKTESAVRIKHIPTGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ N+ AL LKAKLL + E++R +I++++G+ + WG QIR+YVF PY
Sbjct: 271 TCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQTEIGWGNQIRSYVFCPYT 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE++ FI +YLK
Sbjct: 331 LVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 361
>gi|300778963|ref|ZP_07088821.1| peptide chain release factor RF2 [Chryseobacterium gleum ATCC
35910]
gi|300504473|gb|EFK35613.1| peptide chain release factor RF2 [Chryseobacterium gleum ATCC
35910]
Length = 376
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 108/163 (66%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF V PL+ ++++++ I D+ RA G GGQNVNKVET
Sbjct: 201 LVRISPFDSNAKRHTSFVSVYVYPLV-DDTIEININPADISFETMRASGAGGQNVNKVET 259
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVR+ H PTG+ + +E RSQL NK KA+ L+++L + E+R +I + +K EW
Sbjct: 260 AVRLRHAPTGIIIENSESRSQLQNKEKAMQLLRSRLYEMELEERMKARNEIEANKMKIEW 319
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYV HPYKLVKDVR+GHETSD+ +VM+G + PF+K++L
Sbjct: 320 GSQIRNYVMHPYKLVKDVRSGHETSDVDAVMNGNITPFLKAFL 362
>gi|312792717|ref|YP_004025640.1| hypothetical protein Calkr_0478 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179857|gb|ADQ40027.1| hypothetical protein Calkr_0478 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 372
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P + E+ D++I EEDLEI RA G GGQ+VNK E+AVRI HIPTG+ V
Sbjct: 214 HTSFAAVEVLPEV-EDDTDIEIKEEDLEIDTFRASGAGGQHVNKTESAVRIKHIPTGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ N+ AL LKAKLL + E++R +I++++G+ + WG QIR+YVF PY
Sbjct: 273 TCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQTEIGWGNQIRSYVFCPYT 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE++ FI +YLK
Sbjct: 333 LVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363
>gi|312126885|ref|YP_003991759.1| hypothetical protein Calhy_0649 [Caldicellulosiruptor
hydrothermalis 108]
gi|311776904|gb|ADQ06390.1| hypothetical protein Calhy_0649 [Caldicellulosiruptor
hydrothermalis 108]
Length = 370
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 111/164 (67%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ EV+P + E+ D++I EEDLEI RA G GGQ+VNK E+
Sbjct: 199 LVRISPFDAAGRRHTSFAAVEVLPEV-EDDTDIEIKEEDLEIDTFRASGAGGQHVNKTES 257
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRI HIPTG+ V C ERSQ N+ AL LKAKLL + E++R +I++++G+ + W
Sbjct: 258 AVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQTEIGW 317
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIR+YVF PY LVKD RT E ++ +VMDGE++ FI +YLK
Sbjct: 318 GNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 361
>gi|442743231|ref|YP_007374535.1| peptide chain release factor 2 [Candidatus Uzinura diaspidicola
str. ASNER]
gi|442739299|gb|AGC66995.1| peptide chain release factor 2 [Candidatus Uzinura diaspidicola
str. ASNER]
Length = 360
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 110/160 (68%), Gaps = 1/160 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ V PL+ ++S+ +++ D++ R+ G GGQNVNKVET
Sbjct: 195 LVRISPFDSNCKRHTSFASVYVYPLV-DDSISIEVKNYDIKWETFRSSGAGGQNVNKVET 253
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVR+TH+PTGV V C EERSQ NK KAL LK++L I +++ ++ +I K EW
Sbjct: 254 AVRLTHLPTGVVVECQEERSQHKNKEKALQLLKSRLFEIEMKEKNAKRNEIEEKKKKIEW 313
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 290
G QIRNYV HPYKLVKD+RTG+ET+DI SV++GEL PFIK
Sbjct: 314 GSQIRNYVMHPYKLVKDLRTGYETTDIESVLNGELNPFIK 353
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
++ + RV+++ S ++ E +++ +E K FW N EA+ ++ L K L
Sbjct: 7 IKEVNQRVKDLYLSLDIEAKELQISNVEEKINYPHFWLNTKEAKRLMKILRSNKKCTELY 66
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGL---LEEAASIIKELNKALDQFELTQLLSGPYDK 127
+ +D + + ++ ++T L L+ +II ++ E +LS D
Sbjct: 67 KKLSSYTEDLQLLYEFLKKGEATSEELYIQLQNTKNIISDI-------ERNNMLSLEEDH 119
Query: 128 EGAVISITAGAGGTDA 143
GAV+ I +GAGGT++
Sbjct: 120 LGAVLQIASGAGGTES 135
>gi|401683230|ref|ZP_10815118.1| peptide chain release factor 2 [Streptococcus sp. AS14]
gi|400183308|gb|EJO17564.1| peptide chain release factor 2 [Streptococcus sp. AS14]
Length = 325
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 113/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQLEQEKQAAEVNSLKGDKKEISWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E + + VMDG+L+ FI +YLK++
Sbjct: 291 MVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 323
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K D++ ++ E +S E +
Sbjct: 6 FWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDFLAEDESVQG----ELEEKL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 DELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQ 100
>gi|146296348|ref|YP_001180119.1| peptide chain release factor 2 [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409924|gb|ABP66928.1| peptide chain release factor 2 [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 323
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P + E+ D++I EEDLEI RA G GGQ+VNK E+AVRI HIPTG+ V
Sbjct: 165 HTSFAAVEVLPEV-EDDTDIEIKEEDLEIDTFRASGAGGQHVNKTESAVRIKHIPTGIVV 223
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ N+ AL LKAKLL + E++R +I++++G+ + WG QIR+YVF PY
Sbjct: 224 TCQNERSQHKNREIALKILKAKLLELREKERREKIQKLKGEQTEIGWGNQIRSYVFCPYT 283
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE++ FI +YLK
Sbjct: 284 LVKDHRTDAEVGNVEAVMDGEIDVFINAYLK 314
>gi|410027816|ref|ZP_11277652.1| peptide chain release factor 2 [Marinilabilia sp. AK2]
Length = 315
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 108/150 (72%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V P++ ++S+++ I D++ SR+GG GGQNVNKVET V++TH PTG+ V
Sbjct: 156 HTSFASVYVYPVV-DDSIEIDINPSDVDFHTSRSGGAGGQNVNKVETKVQLTHKPTGIVV 214
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQLAN+ +A+ LK++L + E+R +E +I +K ++G QIRNYV HPYK
Sbjct: 215 VCQVERSQLANRERAMQMLKSRLYQMEMEKRNAERAKIESSKMKIDFGSQIRNYVLHPYK 274
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
L+KD RTGHETSD+ +V+DG L FIK++L
Sbjct: 275 LIKDARTGHETSDVQTVLDGGLNEFIKAFL 304
>gi|333980674|ref|YP_004518619.1| peptide chain release factor 2 [Desulfotomaculum kuznetsovii DSM
6115]
gi|333824155|gb|AEG16818.1| peptide chain release factor 2 [Desulfotomaculum kuznetsovii DSM
6115]
Length = 366
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + EE + ++I EDL+I R+ G GGQ+VNK E+AVRITH+PTG+ V
Sbjct: 212 HTSFASVDVLPEV-EEDVQLEIRPEDLKIDTFRSSGAGGQHVNKTESAVRITHLPTGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ+AN+ A+ L+AKLL + +++ +E+ +RG+ + WG QIR+YVFHPY
Sbjct: 271 QCQSERSQIANRNAAMKLLRAKLLDLEMKKKEAELAALRGEQGEIAWGNQIRSYVFHPYS 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RTG E ++ +VMDGE++ FI +YL+ K
Sbjct: 331 LVKDHRTGVEVGNVQAVMDGEIDEFISAYLRQK 363
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 4 FYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDV 63
+ L +++E R+EE+R S + Q E+E+ LE D FW++ +AQ+ Q L +
Sbjct: 2 YAELSRELENLGKRIEELRVSLDIAQKEEEIKRLEEAMLDPGFWNDPEQAQQVTQKLAAL 61
Query: 64 KDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSG 123
KD++ + +D V V L + D + E A +K+L + +++ EL LLSG
Sbjct: 62 KDRVAQYRELARVQEDLV--VLLDLGEEEEDETVAREVAGELKKLARRVEKMELEVLLSG 119
Query: 124 PYDKEGAVISITAGAGGTDAQ 144
PYD+ A++S+ AGAGGT+AQ
Sbjct: 120 PYDRGNAIVSLHAGAGGTEAQ 140
>gi|284048024|ref|YP_003398363.1| peptide chain release factor 2 [Acidaminococcus fermentans DSM
20731]
gi|283952245|gb|ADB47048.1| peptide chain release factor 2 [Acidaminococcus fermentans DSM
20731]
Length = 366
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 108/151 (71%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L +E+++V + +D+ + + RA G GGQ+VNK +AVR+THIPTG+ V
Sbjct: 213 HTSFAAVDVMPEL-DETVEVNLNMDDVRVDYYRASGAGGQHVNKTSSAVRMTHIPTGIVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL NK + L+ L+AKL + + +I ++ GD EWG QIR+YVF PY
Sbjct: 272 QCQNERSQLQNKERCLALLRAKLYEYEKAIQDKKISELAGDYQAIEWGSQIRSYVFQPYT 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RTG ET +I +VMDG+L+PF+++YL+
Sbjct: 332 MVKDHRTGAETGNIQAVMDGDLDPFVEAYLR 362
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L+ + D++EE++ + Q E+ + +LE + A FWD+ +AQ Q ++K +
Sbjct: 6 LKPAITQLKDKLEELKGGLKIAQKEERIEDLEHQMAAPGFWDDPDKAQTVAQEANNLKTE 65
Query: 67 INLLTDFKTKMDDAVTIVKLT-EEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
+ K+DD T+ ++ EE D + G +EE ++ K L EL LLS Y
Sbjct: 66 VETYHGLAAKLDDVETLWEMAMEEKDDSLQGEIEEE---VENARKTLADLELGMLLSDQY 122
Query: 126 DKEGAVISITAGAGGTDAQ 144
D A++++ AGAGGT+AQ
Sbjct: 123 DANNAILTLHAGAGGTEAQ 141
>gi|257066737|ref|YP_003152993.1| peptide chain release factor 2 [Anaerococcus prevotii DSM 20548]
gi|256798617|gb|ACV29272.1| bacterial peptide chain release factor 2 (bRF- 2) [Anaerococcus
prevotii DSM 20548]
Length = 367
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 188/365 (51%), Gaps = 73/365 (20%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETL--- 57
M++ + LR D+E S +++ I S LEKE+ ELE ++A FW++ +AQ+ +
Sbjct: 1 MKEIFELRSDIEDLSQKLKLIGDSLDPASLEKEIKELEKQSASPDFWNDSDKAQKIMADL 60
Query: 58 --------------QALTDVKDKINLL-------TDFKTKMDDAV-------TIVKLTEE 89
L D D ++L+ TD +++D++ T +KL +
Sbjct: 61 ASKKDELSDYKKLENGLVDNTDMLDLVEMSEEKETDTIEEVEDSLKNLAKLATQMKLRTQ 120
Query: 90 MD------------STDAGLLEE---AASIIKELNKALD----QFELTQL---------- 120
+D + AG LE A + + + D ++E+ L
Sbjct: 121 LDGEYDKNNAYISINAGAGGLEATDWADMLFRMYKRYFDSIGFKYEIKDLNNEEAGGIKS 180
Query: 121 ----LSGPYD------KEGA--VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEE 168
++GPY ++G ++ I+ + TSF+ +V P L +E++++ I
Sbjct: 181 ATMHVTGPYAYGYLKAEKGVHRLVRISPFDSQSRRHTSFASVDVFPEL-DENIELDIDPS 239
Query: 169 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 228
DL I RA G GGQ+VNK ++AVRITHIPTGV ERSQ+ N+ A++ LK+KL+
Sbjct: 240 DLRIDTYRASGAGGQHVNKTDSAVRITHIPTGVVATSQAERSQIQNRQTAMNLLKSKLVQ 299
Query: 229 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 288
I EE++ +I+ I+G + WG QIR+YVF PY LVKD RTG E ++ +VMDG+++ F
Sbjct: 300 IKEEEQREKIEDIQGSYSQIAWGSQIRSYVFQPYTLVKDHRTGFEMGNVEAVMDGDIQGF 359
Query: 289 IKSYL 293
I ++L
Sbjct: 360 IDAFL 364
>gi|320547182|ref|ZP_08041476.1| peptide chain release factor RF2 [Streptococcus equinus ATCC 9812]
gi|320448169|gb|EFW88918.1| peptide chain release factor RF2 [Streptococcus equinus ATCC 9812]
Length = 336
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 183 HTSFSSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 241
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 242 ASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 301
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RTG+E + + VMDG+++ FI ++LK++
Sbjct: 302 MVKDHRTGYEVAQVDKVMDGDIDGFIDAFLKWR 334
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 4/115 (3%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE K + FW++ AQ+T Q L +K + + D+ +++ +E
Sbjct: 1 MEEDIALLENKMTEPDFWNDNIAAQKTSQELNSLKQTYETFNEMQELSDETELYLEMLDE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
DS + L E +++L+K + +E+T LLS PYD+ A++ I G+GGT+AQ
Sbjct: 61 DDSIQSELEE----TLEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQ 111
>gi|414084914|ref|YP_006993625.1| peptide chain release factor 2 [Carnobacterium maltaromaticum
LMA28]
gi|412998501|emb|CCO12310.1| peptide chain release factor 2 [Carnobacterium maltaromaticum
LMA28]
Length = 353
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +V+P + E+++D+QI +DL I RA G GGQ++NK ++AVRITH+PTGV V
Sbjct: 197 HTSFVSIDVIPEM-EDNVDIQINTDDLRIDTYRASGAGGQHINKTDSAVRITHLPTGVVV 255
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQ+ NK +A+ LKAKL + E++ ++ +IRG+ + WG QIR+YVFHPY
Sbjct: 256 ASQAQRSQMKNKDQAMGMLKAKLYQLELEEKEKQMAEIRGEQKEIGWGSQIRSYVFHPYS 315
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
++KD RT +ET ++ VMDG+L+PFI +YLK K
Sbjct: 316 MIKDHRTNYETGNVQGVMDGDLDPFIDAYLKSK 348
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 8/121 (6%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINL---LTDFKTKMDDAVTI 83
L+ +E+++AE + + FWD+ +AQ + +K+K N L + K ++D + +
Sbjct: 10 LESMERDIAEFDELMGEPGFWDDGIKAQSVINEANIIKEKYNQFQQLAETKEELDLLLEM 69
Query: 84 VKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
VK E+ + +E + LDQFEL LLS PYDK A+I + GAGGT++
Sbjct: 70 VKEEEDAELE-----KELEENLTTFLAVLDQFELDMLLSEPYDKNNAIIELHPGAGGTES 124
Query: 144 Q 144
Q
Sbjct: 125 Q 125
>gi|402311418|ref|ZP_10830363.1| peptide chain release factor 2 [Lachnospiraceae bacterium ICM7]
gi|400372700|gb|EJP25640.1| peptide chain release factor 2 [Lachnospiraceae bacterium ICM7]
Length = 337
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 109/163 (66%), Gaps = 2/163 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF ++MP + EE +DV I +DL I R+ G GGQ++NK +A+RITHIPTGV V
Sbjct: 174 QTSFVSCDIMPDI-EEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK +A+ LKAKL ++ ++ ++ IRGD WG QIR+YV PY
Sbjct: 233 QCQNERSQFQNKDRAMQMLKAKLFMLKQQANVEKLSDIRGDVKDIGWGNQIRSYVMQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDA 306
+VKD RTG E+ ++ +VMDG+++ FI +YL ++ S+ A +A
Sbjct: 293 MVKDHRTGAESGNVSAVMDGDIDKFIIAYLTWQ-SLGCPARNA 334
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 45 SFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASI 104
+FWD+ E+ + ++ +KD + K++ +D ++++ E D L+ E +
Sbjct: 5 TFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEMGYE--ENDESLIPEIEGM 62
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
++ K +D+ ++ LL+G YD A++ + AGAGGT++
Sbjct: 63 LEAFTKEIDELKIATLLTGEYDSSNAIMKLNAGAGGTES 101
>gi|421206200|ref|ZP_15663264.1| peptide chain release factor 2 [Streptococcus pneumoniae 2090008]
gi|421210707|ref|ZP_15667695.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070035]
gi|421231521|ref|ZP_15688168.1| peptide chain release factor 2 [Streptococcus pneumoniae 2080076]
gi|421291559|ref|ZP_15742299.1| peptide chain release factor 2 [Streptococcus pneumoniae GA56348]
gi|421311502|ref|ZP_15762109.1| peptide chain release factor 2 [Streptococcus pneumoniae GA58981]
gi|395574580|gb|EJG35157.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070035]
gi|395577280|gb|EJG37825.1| peptide chain release factor 2 [Streptococcus pneumoniae 2090008]
gi|395596620|gb|EJG56836.1| peptide chain release factor 2 [Streptococcus pneumoniae 2080076]
gi|395894861|gb|EJH05838.1| peptide chain release factor 2 [Streptococcus pneumoniae GA56348]
gi|395912080|gb|EJH22943.1| peptide chain release factor 2 [Streptococcus pneumoniae GA58981]
Length = 325
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 114/155 (73%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E D + +E + +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DESVHDELVAQL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 AELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|422858756|ref|ZP_16905406.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1057]
gi|327459899|gb|EGF06239.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1057]
Length = 325
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 113/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E + + VMDG+L+ FI +YLK++
Sbjct: 291 MVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 323
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K D++ ++ E +S E +
Sbjct: 6 FWDDNIAAQKTSQDLNELKQTYENFHQMTELFDESEILLDFLAEDESVQG----ELEEKL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 AELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQ 100
>gi|323351855|ref|ZP_08087506.1| peptide chain release factor RF2 [Streptococcus sanguinis VMC66]
gi|422823871|ref|ZP_16872059.1| peptide chain release factor RF2 [Streptococcus sanguinis SK405]
gi|422826064|ref|ZP_16874243.1| peptide chain release factor RF2 [Streptococcus sanguinis SK678]
gi|422846378|ref|ZP_16893061.1| peptide chain release factor RF2 [Streptococcus sanguinis SK72]
gi|422848953|ref|ZP_16895629.1| peptide chain release factor RF2 [Streptococcus sanguinis SK115]
gi|422853975|ref|ZP_16900639.1| peptide chain release factor RF2 [Streptococcus sanguinis SK160]
gi|422855806|ref|ZP_16902464.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1]
gi|422860427|ref|ZP_16907071.1| peptide chain release factor RF2 [Streptococcus sanguinis SK330]
gi|422862892|ref|ZP_16909524.1| peptide chain release factor RF2 [Streptococcus sanguinis SK408]
gi|422865777|ref|ZP_16912402.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1058]
gi|422876741|ref|ZP_16923211.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1056]
gi|422879147|ref|ZP_16925613.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1059]
gi|422881999|ref|ZP_16928455.1| peptide chain release factor RF2 [Streptococcus sanguinis SK355]
gi|422884464|ref|ZP_16930913.1| peptide chain release factor RF2 [Streptococcus sanguinis SK49]
gi|422928992|ref|ZP_16961934.1| peptide chain release factor RF2 [Streptococcus sanguinis ATCC
29667]
gi|422931962|ref|ZP_16964893.1| peptide chain release factor RF2 [Streptococcus sanguinis SK340]
gi|322121912|gb|EFX93644.1| peptide chain release factor RF2 [Streptococcus sanguinis VMC66]
gi|324993198|gb|EGC25118.1| peptide chain release factor RF2 [Streptococcus sanguinis SK405]
gi|324995500|gb|EGC27412.1| peptide chain release factor RF2 [Streptococcus sanguinis SK678]
gi|325687821|gb|EGD29841.1| peptide chain release factor RF2 [Streptococcus sanguinis SK72]
gi|325689974|gb|EGD31978.1| peptide chain release factor RF2 [Streptococcus sanguinis SK115]
gi|325696780|gb|EGD38668.1| peptide chain release factor RF2 [Streptococcus sanguinis SK160]
gi|327461467|gb|EGF07798.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1]
gi|327469623|gb|EGF15092.1| peptide chain release factor RF2 [Streptococcus sanguinis SK330]
gi|327473772|gb|EGF19190.1| peptide chain release factor RF2 [Streptococcus sanguinis SK408]
gi|327489322|gb|EGF21115.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1058]
gi|332359597|gb|EGJ37415.1| peptide chain release factor RF2 [Streptococcus sanguinis SK49]
gi|332361549|gb|EGJ39353.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1056]
gi|332362808|gb|EGJ40602.1| peptide chain release factor RF2 [Streptococcus sanguinis SK355]
gi|332366326|gb|EGJ44078.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1059]
gi|339615678|gb|EGQ20349.1| peptide chain release factor RF2 [Streptococcus sanguinis ATCC
29667]
gi|339619395|gb|EGQ23976.1| peptide chain release factor RF2 [Streptococcus sanguinis SK340]
Length = 325
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 113/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E + + VMDG+L+ FI +YLK++
Sbjct: 291 MVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 323
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K D++ ++ E +S E +
Sbjct: 6 FWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDFLAEDESVQG----ELEEKL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 AELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQ 100
>gi|322385191|ref|ZP_08058838.1| peptide chain release factor RF2 [Streptococcus cristatus ATCC
51100]
gi|417921646|ref|ZP_12565136.1| peptide chain release factor 2 [Streptococcus cristatus ATCC 51100]
gi|321270815|gb|EFX53728.1| peptide chain release factor RF2 [Streptococcus cristatus ATCC
51100]
gi|342833531|gb|EGU67811.1| peptide chain release factor 2 [Streptococcus cristatus ATCC 51100]
Length = 325
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 113/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V++ ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E + + VMDG+L+ FI +YLK++
Sbjct: 291 MVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 323
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K D++ ++ E DS E +
Sbjct: 6 FWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDFLAEDDSVQE----ELEEKL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 TELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQ 100
>gi|300860397|ref|ZP_07106484.1| peptide chain release factor 2, programmed frameshift [Enterococcus
faecalis TUSoD Ef11]
gi|300849436|gb|EFK77186.1| peptide chain release factor 2, programmed frameshift [Enterococcus
faecalis TUSoD Ef11]
Length = 366
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++++++ I +DL+I RA G GGQ++NK E+AVRITHIPTG V
Sbjct: 213 HTSFCSVDVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+S LKAKL + E++A E +RG+ ++ WG QIR+YVFHPY
Sbjct: 272 ASQAQRSQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYS 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +ET ++ +VMDG+L+ FI +YLK + S
Sbjct: 332 MVKDHRTNYETGNVQAVMDGDLDGFIDAYLKQRLS 366
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 2/138 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R ++ + ++ R S L QLE+++AE E + + FWDN AQ+ + +K+K
Sbjct: 6 IRTLLDEMTQKITSFRRSLCLDQLEEDIAEAENRMGEPGFWDNTETAQKLINETNSLKEK 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
++D+ + +L +E DA + EE I L + L +EL+ LL+ PYD
Sbjct: 66 YQQFHQLSEELDELTVMFELQQE--EYDAEIQEELEERIHLLQERLTTYELSLLLNEPYD 123
Query: 127 KEGAVISITAGAGGTDAQ 144
A+I + GAGGT++Q
Sbjct: 124 HNNALIELHPGAGGTESQ 141
>gi|422871199|ref|ZP_16917692.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1087]
gi|328945974|gb|EGG40121.1| peptide chain release factor RF2 [Streptococcus sanguinis SK1087]
Length = 325
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 113/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E + + VMDG+L+ FI +YLK++
Sbjct: 291 MVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 323
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K D++ ++ E +S E +
Sbjct: 6 FWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDFMAEDESVQG----ELEEKL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 AELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQ 100
>gi|169826759|ref|YP_001696917.1| peptide chain release factor 2 [Lysinibacillus sphaericus C3-41]
gi|168991247|gb|ACA38787.1| Peptide chain release factor 2 (RF-2) [Lysinibacillus sphaericus
C3-41]
Length = 328
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 108/153 (70%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP +E++++ I EDL+I RA G GGQ++N ++AVRITHIPTG V
Sbjct: 175 HTSFVSCDVMPEF-DENIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTVV 233
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ+ N+ KA++ LK KL + E++ +++ +IRG+ WG QIR+YVFHPY
Sbjct: 234 QCQAERSQIKNREKAMAMLKGKLYQLELEKQQAQLDEIRGEQKDIGWGSQIRSYVFHPYS 293
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT ET ++ +VMDG+L+PFI +YL+ K
Sbjct: 294 MVKDHRTNEETGNVGAVMDGDLDPFINAYLRSK 326
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 107 ELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E + + FEL LLSGPYD+ A++ + GAGGT++Q
Sbjct: 66 EFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQ 103
>gi|302872499|ref|YP_003841135.1| hypothetical protein COB47_1880 [Caldicellulosiruptor obsidiansis
OB47]
gi|302575358|gb|ADL43149.1| hypothetical protein COB47_1880 [Caldicellulosiruptor obsidiansis
OB47]
Length = 372
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P + E+ D++I EEDLEI RA G GGQ+VNK E+AVRI HIPTG+ V
Sbjct: 214 HTSFAAVEVLPEV-EDDTDIEIKEEDLEIDTFRASGAGGQHVNKTESAVRIKHIPTGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ N+ AL LKAKLL + E++R +I++++G+ WG QIR+YVF PY
Sbjct: 273 TCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQTDIGWGNQIRSYVFCPYT 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE++ FI +YLK
Sbjct: 333 LVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363
>gi|365843352|ref|ZP_09384285.1| peptide chain release factor 2 [Flavonifractor plautii ATCC 29863]
gi|373120827|ref|ZP_09534864.1| peptide chain release factor 2 [Lachnospiraceae bacterium
7_1_58FAA]
gi|364572159|gb|EHM49720.1| peptide chain release factor 2 [Flavonifractor plautii ATCC 29863]
gi|371655614|gb|EHO20956.1| peptide chain release factor 2 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 373
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EVMP +P++ ++V I ED+E+ R+ G GGQ++NK +AVR+ H PTG+ V
Sbjct: 214 QTSFAALEVMPEIPDD-VEVDIRPEDVEMQVFRSSGAGGQHINKTSSAVRLIHKPTGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ N+ + L++KL+ + + A +I I+G +K EWG QIR+YVF PY+
Sbjct: 273 SCQTERSQFQNRDTCMRMLRSKLVELQMQAHAEKISDIKGVQLKIEWGSQIRSYVFMPYQ 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RTG+ETS+I +VMDGEL+ FI +YLK
Sbjct: 333 LVKDNRTGYETSNINAVMDGELDGFINAYLK 363
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 74/127 (58%), Gaps = 2/127 (1%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
++E+ + GL+ +E+ LE ++A FWDN +AQ+ Q + ++DKI KT+
Sbjct: 18 LDELDQALGLETAIREVEMLESESASDGFWDNLEKAQKVQQRVKQLRDKIEGQQKRKTQW 77
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
DD +T+ +L E + D L+ E +L +++ +L+ LL+G YD A+++ AG
Sbjct: 78 DDLMTLCELGNEAE--DETLVPEVEEGFAKLEAEIEEAKLSTLLTGEYDGSNAILTFHAG 135
Query: 138 AGGTDAQ 144
AGGT+AQ
Sbjct: 136 AGGTEAQ 142
>gi|410667011|ref|YP_006919382.1| peptide chain release factor 2 [Thermacetogenium phaeum DSM 12270]
gi|409104758|gb|AFV10883.1| peptide chain release factor 2 [Thermacetogenium phaeum DSM 12270]
Length = 314
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 113/151 (74%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + E +++I +DL I RA G GGQ VNK ++AVRITH+PTG+ V
Sbjct: 160 HTSFASVDVIPQV-EADTEIEINPDDLRIDTYRASGPGGQYVNKTDSAVRITHLPTGIVV 218
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQLAN+++A++ L+++LL + ++++ E+ ++RG+ + WG QIR+YVF PY
Sbjct: 219 QCQSERSQLANRLRAMNMLRSRLLALKKQEQDEELARLRGEQREIAWGNQIRSYVFEPYT 278
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RTG ET ++ +VM+G+++PFI++YL+
Sbjct: 279 LVKDHRTGLETGNVQAVMNGQIDPFIEAYLR 309
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 57 LQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFE 116
LQ +K+ ++ + K ++++ +++L+ M+S D L EE A ++ L K +++E
Sbjct: 2 LQEAAHLKEDLDRYLEIKKEIEELQVLLELS--MESGDPELEEELAEGLESLQKTFERWE 59
Query: 117 LTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L +GPYD+ A++S+ AGAGGT+AQ
Sbjct: 60 QDNLFTGPYDQRNALVSLHAGAGGTEAQ 87
>gi|323703031|ref|ZP_08114687.1| peptide chain release factor 2 [Desulfotomaculum nigrificans DSM
574]
gi|323532044|gb|EGB21927.1| peptide chain release factor 2 [Desulfotomaculum nigrificans DSM
574]
Length = 326
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 106/153 (69%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P++ +E ++V I EDL+I R+GG GGQ+VNK ++AVRITH+PTG+ V
Sbjct: 174 HTSFASVDVLPVVDDE-VEVNIRPEDLKIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ N+ A+ LKAKL+ + ++ E+ +RGD WG QIR+YVFHPY
Sbjct: 233 ACQNERSQTYNRAAAMKLLKAKLIDLELRKKEEELAALRGDQKDIAWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RTG E ++ +VMDG ++ FI +YLK K
Sbjct: 293 LVKDHRTGVEVGNVYAVMDGAIDEFIAAYLKQK 325
>gi|227529549|ref|ZP_03959598.1| peptide chain release factor RF2 [Lactobacillus vaginalis ATCC
49540]
gi|227350508|gb|EEJ40799.1| peptide chain release factor RF2 [Lactobacillus vaginalis ATCC
49540]
Length = 356
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L +ES+++ I DL + R+ G GGQ++NK E+AVRITHIPTG+
Sbjct: 198 HTSFASVDVMPEL-DESVNIDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHIPTGIVT 256
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQL N++ A++ LK+KL + EE++A + +I G+ ++ WG QIR+YVFHPY
Sbjct: 257 SSQAERSQLQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLEIGWGSQIRSYVFHPYT 316
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKD R+GHET + +VMDG+L+PFI +YL++K S
Sbjct: 317 LVKDNRSGHETHNGQAVMDGDLDPFINAYLQWKLS 351
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 21 IRASAGL---QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+ AS GL L++ +AE E K A+ FWD+ AQ+ + A ++KDK + + +
Sbjct: 2 LPASGGLFDLDALDESIAENEQKMAEPGFWDDNVAAQKVINANNELKDKRDTFVKLRDNI 61
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
+ T ++L E D L E E K L+Q+ L QLL G YD + A++ I G
Sbjct: 62 GNLQTSIELLEL--EPDDELQSEFEKSFGETQKELEQYRLNQLLDGEYDAKNAILEIHPG 119
Query: 138 AGGTDAQ 144
AGGT+AQ
Sbjct: 120 AGGTEAQ 126
>gi|256762748|ref|ZP_05503328.1| peptide chain release factor 2 [Enterococcus faecalis T3]
gi|257079206|ref|ZP_05573567.1| peptide chain release factor 2 [Enterococcus faecalis JH1]
gi|294779419|ref|ZP_06744820.1| peptide chain release factor 2 [Enterococcus faecalis PC1.1]
gi|307269575|ref|ZP_07550914.1| peptide chain release factor 2 [Enterococcus faecalis TX4248]
gi|307289302|ref|ZP_07569258.1| peptide chain release factor 2 [Enterococcus faecalis TX0109]
gi|397700070|ref|YP_006537858.1| peptide chain release factor 2 [Enterococcus faecalis D32]
gi|422695176|ref|ZP_16753164.1| peptide chain release factor 2 [Enterococcus faecalis TX4244]
gi|422704670|ref|ZP_16762480.1| peptide chain release factor 2 [Enterococcus faecalis TX1302]
gi|256683999|gb|EEU23694.1| peptide chain release factor 2 [Enterococcus faecalis T3]
gi|256987236|gb|EEU74538.1| peptide chain release factor 2 [Enterococcus faecalis JH1]
gi|294453548|gb|EFG21949.1| peptide chain release factor 2 [Enterococcus faecalis PC1.1]
gi|306500011|gb|EFM69372.1| peptide chain release factor 2 [Enterococcus faecalis TX0109]
gi|306514195|gb|EFM82771.1| peptide chain release factor 2 [Enterococcus faecalis TX4248]
gi|315147459|gb|EFT91475.1| peptide chain release factor 2 [Enterococcus faecalis TX4244]
gi|315163916|gb|EFU07933.1| peptide chain release factor 2 [Enterococcus faecalis TX1302]
gi|397336709|gb|AFO44381.1| peptide chain release factor 2 [Enterococcus faecalis D32]
Length = 327
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++++++ I +DL+I RA G GGQ++NK E+AVRITHIPTG V
Sbjct: 174 HTSFCSVDVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+S LKAKL + E++A E +RG+ ++ WG QIR+YVFHPY
Sbjct: 233 ASQAQRSQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +ET ++ +VMDG+L+ FI +YLK + S
Sbjct: 293 MVKDHRTNYETGNVQAVMDGDLDGFIDAYLKQRLS 327
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+ FWDN AQ+ + +K+K ++D+ + +L +E D + EE
Sbjct: 2 GEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQE--EYDTEIQEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
I L + L +EL+ LL+ PYD A+I + GAGGT++Q
Sbjct: 60 EERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQ 102
>gi|163789840|ref|ZP_02184276.1| peptide chain release factor 2, programmed frameshift
[Carnobacterium sp. AT7]
gi|159874780|gb|EDP68848.1| peptide chain release factor 2, programmed frameshift
[Carnobacterium sp. AT7]
Length = 353
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +V+P L ++S+D++I +DL+I RA G GGQ++N ++AVRITHIP+GV V
Sbjct: 196 HTSFVSIDVVPEL-DDSVDIKINSDDLKIDTYRATGAGGQHINTTDSAVRITHIPSGVVV 254
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+S LKAKL + E++ E+ IRG+ ++ WG QIR+YVFHPY
Sbjct: 255 ASQAQRSQLKNRDQAMSMLKAKLYQLEVEEQEKEMAAIRGEQLEIGWGSQIRSYVFHPYS 314
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +ET +I VMDG ++PFI++YL+ K S
Sbjct: 315 MVKDHRTNYETGNIAQVMDGGIDPFIQAYLRSKVS 349
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 68/118 (57%), Gaps = 2/118 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L+ LE+++AE + + +FW++ +AQ + ++K+K N D T+ +D ++++
Sbjct: 9 LENLERDIAEYNDRMTEPTFWEDAQKAQTVINEANELKEKYNQYNDLVTEKEDLELLLEM 68
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+E D L +E S I LDQ+EL LLS PYDK A+I + GAGGT++Q
Sbjct: 69 VKE--ENDEELAKELNSKISPFLDKLDQYELDLLLSDPYDKNNAIIELHPGAGGTESQ 124
>gi|125717712|ref|YP_001034845.1| peptide chain release factor 2 [Streptococcus sanguinis SK36]
gi|125497629|gb|ABN44295.1| Peptide chain release factor 2, putative [Streptococcus sanguinis
SK36]
Length = 325
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 113/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQLEQEKQAAEVDSLKGDKKEISWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E + + VMDG+L+ FI +YLK++
Sbjct: 291 MVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 323
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K D++ ++ E D G LEE + +
Sbjct: 6 FWDDNIAAQKTSQELNELKQTYENFHQMTELFDESEILLDFLAE-DELVQGELEEKLAEL 64
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+++ + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 65 EKM---MTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQ 100
>gi|404484151|ref|ZP_11019365.1| peptide chain release factor 2 [Clostridiales bacterium OBRC5-5]
gi|404342831|gb|EJZ69201.1| peptide chain release factor 2 [Clostridiales bacterium OBRC5-5]
Length = 351
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 109/163 (66%), Gaps = 2/163 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF ++MP + EE +DV I +DL I R+ G GGQ++NK +A+RITH+PTGV V
Sbjct: 188 QTSFVSCDIMPDI-EEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGVVV 246
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK KA+ LKAKL ++ ++ ++ IRGD WG QIR+YV PY
Sbjct: 247 QCQNERSQFQNKDKAMQMLKAKLFMLKQQANVEKLSDIRGDVKDIGWGNQIRSYVMQPYT 306
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDA 306
+VKD RTG E+ ++ +VMDG+++ FI +YL ++ S+ A +A
Sbjct: 307 MVKDHRTGAESGNVSAVMDGDIDKFIIAYLTWQ-SLGCPARNA 348
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
EK++ EL+ + +FWD+ E+ + ++ +KD + K++ +D ++++ E
Sbjct: 5 EKKIIELDRAMEEPTFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEMGYE- 63
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
D L+ E +++ K +D+ ++ LL+G YD A++ + AGAGGT++
Sbjct: 64 -ENDDSLIPEIEGMLEAFTKEIDELKIATLLTGEYDSSNAIMKLNAGAGGTES 115
>gi|384099242|ref|ZP_10000331.1| peptide chain release factor 2 [Imtechella halotolerans K1]
gi|383833223|gb|EID72688.1| peptide chain release factor 2 [Imtechella halotolerans K1]
Length = 314
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/150 (52%), Positives = 104/150 (69%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF V PL ++S+++ I D+ RA G GGQNVNKVETAVR+ H PTG+ +
Sbjct: 156 HTSFVSVYVYPL-ADDSIEIDINPADITFETMRASGAGGQNVNKVETAVRLRHHPTGIII 214
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+E RSQL NK KAL LK++L I ++R ++ +I +K EWG QIRNYV HPYK
Sbjct: 215 ENSETRSQLDNKTKALQLLKSQLYEIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYK 274
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRT HE++D+ VM+GE++PF+K+YL
Sbjct: 275 LVKDVRTSHESTDVDGVMNGEIDPFLKAYL 304
>gi|229545626|ref|ZP_04434351.1| peptide chain release factor RF2 [Enterococcus faecalis TX1322]
gi|229549816|ref|ZP_04438541.1| peptide chain release factor RF2 [Enterococcus faecalis ATCC 29200]
gi|255972544|ref|ZP_05423130.1| peptide chain release factor 2 [Enterococcus faecalis T1]
gi|255975657|ref|ZP_05426243.1| peptide chain release factor 2 [Enterococcus faecalis T2]
gi|256619256|ref|ZP_05476102.1| peptide chain release factor 2 [Enterococcus faecalis ATCC 4200]
gi|256853316|ref|ZP_05558686.1| peptide chain release factor 2 [Enterococcus faecalis T8]
gi|256959169|ref|ZP_05563340.1| peptide chain release factor 2 [Enterococcus faecalis DS5]
gi|256964932|ref|ZP_05569103.1| peptide chain release factor 2 [Enterococcus faecalis HIP11704]
gi|257084989|ref|ZP_05579350.1| peptide chain release factor 2 [Enterococcus faecalis Fly1]
gi|257087047|ref|ZP_05581408.1| peptide chain release factor 2 [Enterococcus faecalis D6]
gi|257419489|ref|ZP_05596483.1| peptide chain release factor [Enterococcus faecalis T11]
gi|257422371|ref|ZP_05599361.1| peptide chain release factor [Enterococcus faecalis X98]
gi|307273028|ref|ZP_07554274.1| peptide chain release factor 2 [Enterococcus faecalis TX0855]
gi|307275776|ref|ZP_07556915.1| peptide chain release factor 2 [Enterococcus faecalis TX2134]
gi|307277873|ref|ZP_07558957.1| peptide chain release factor 2 [Enterococcus faecalis TX0860]
gi|307291799|ref|ZP_07571670.1| peptide chain release factor 2 [Enterococcus faecalis TX0411]
gi|312951693|ref|ZP_07770588.1| peptide chain release factor 2 [Enterococcus faecalis TX0102]
gi|384513438|ref|YP_005708531.1| peptide chain release factor RF2 [Enterococcus faecalis OG1RF]
gi|384518787|ref|YP_005706092.1| peptide chain release factor 2 [Enterococcus faecalis 62]
gi|422685792|ref|ZP_16744005.1| peptide chain release factor 2 [Enterococcus faecalis TX4000]
gi|422692827|ref|ZP_16750842.1| peptide chain release factor 2 [Enterococcus faecalis TX0031]
gi|422696613|ref|ZP_16754569.1| peptide chain release factor 2 [Enterococcus faecalis TX1346]
gi|422701958|ref|ZP_16759798.1| peptide chain release factor 2 [Enterococcus faecalis TX1342]
gi|422706472|ref|ZP_16764170.1| peptide chain release factor 2 [Enterococcus faecalis TX0043]
gi|422708665|ref|ZP_16766193.1| peptide chain release factor 2 [Enterococcus faecalis TX0027]
gi|422720723|ref|ZP_16777332.1| peptide chain release factor 2 [Enterococcus faecalis TX0017]
gi|422722022|ref|ZP_16778599.1| peptide chain release factor 2 [Enterococcus faecalis TX2137]
gi|422727247|ref|ZP_16783690.1| peptide chain release factor 2 [Enterococcus faecalis TX0312]
gi|422735925|ref|ZP_16792191.1| peptide chain release factor 2 [Enterococcus faecalis TX1341]
gi|422739198|ref|ZP_16794381.1| peptide chain release factor 2 [Enterococcus faecalis TX2141]
gi|424673023|ref|ZP_18109966.1| peptide chain release factor 2 [Enterococcus faecalis 599]
gi|428767253|ref|YP_007153364.1| similar to peptide chain release factor 2, C-terminal [Enterococcus
faecalis str. Symbioflor 1]
gi|430361793|ref|ZP_19426870.1| peptide chain release factor RF2 [Enterococcus faecalis OG1X]
gi|430368471|ref|ZP_19428212.1| peptide chain release factor RF2 [Enterococcus faecalis M7]
gi|229305085|gb|EEN71081.1| peptide chain release factor RF2 [Enterococcus faecalis ATCC 29200]
gi|229309284|gb|EEN75271.1| peptide chain release factor RF2 [Enterococcus faecalis TX1322]
gi|255963562|gb|EET96038.1| peptide chain release factor 2 [Enterococcus faecalis T1]
gi|255968529|gb|EET99151.1| peptide chain release factor 2 [Enterococcus faecalis T2]
gi|256598783|gb|EEU17959.1| peptide chain release factor 2 [Enterococcus faecalis ATCC 4200]
gi|256711775|gb|EEU26813.1| peptide chain release factor 2 [Enterococcus faecalis T8]
gi|256949665|gb|EEU66297.1| peptide chain release factor 2 [Enterococcus faecalis DS5]
gi|256955428|gb|EEU72060.1| peptide chain release factor 2 [Enterococcus faecalis HIP11704]
gi|256993019|gb|EEU80321.1| peptide chain release factor 2 [Enterococcus faecalis Fly1]
gi|256995077|gb|EEU82379.1| peptide chain release factor 2 [Enterococcus faecalis D6]
gi|257161317|gb|EEU91277.1| peptide chain release factor [Enterococcus faecalis T11]
gi|257164195|gb|EEU94155.1| peptide chain release factor [Enterococcus faecalis X98]
gi|306497065|gb|EFM66611.1| peptide chain release factor 2 [Enterococcus faecalis TX0411]
gi|306505270|gb|EFM74456.1| peptide chain release factor 2 [Enterococcus faecalis TX0860]
gi|306507468|gb|EFM76599.1| peptide chain release factor 2 [Enterococcus faecalis TX2134]
gi|306510013|gb|EFM79037.1| peptide chain release factor 2 [Enterococcus faecalis TX0855]
gi|310630410|gb|EFQ13693.1| peptide chain release factor 2 [Enterococcus faecalis TX0102]
gi|315027919|gb|EFT39851.1| peptide chain release factor 2 [Enterococcus faecalis TX2137]
gi|315029504|gb|EFT41436.1| peptide chain release factor 2 [Enterococcus faecalis TX4000]
gi|315031977|gb|EFT43909.1| peptide chain release factor 2 [Enterococcus faecalis TX0017]
gi|315037173|gb|EFT49105.1| peptide chain release factor 2 [Enterococcus faecalis TX0027]
gi|315145002|gb|EFT89018.1| peptide chain release factor 2 [Enterococcus faecalis TX2141]
gi|315152286|gb|EFT96302.1| peptide chain release factor 2 [Enterococcus faecalis TX0031]
gi|315156087|gb|EFU00104.1| peptide chain release factor 2 [Enterococcus faecalis TX0043]
gi|315158272|gb|EFU02289.1| peptide chain release factor 2 [Enterococcus faecalis TX0312]
gi|315167276|gb|EFU11293.1| peptide chain release factor 2 [Enterococcus faecalis TX1341]
gi|315169439|gb|EFU13456.1| peptide chain release factor 2 [Enterococcus faecalis TX1342]
gi|315174820|gb|EFU18837.1| peptide chain release factor 2 [Enterococcus faecalis TX1346]
gi|323480920|gb|ADX80359.1| peptide chain release factor 2 [Enterococcus faecalis 62]
gi|327535327|gb|AEA94161.1| peptide chain release factor RF2 [Enterococcus faecalis OG1RF]
gi|402352833|gb|EJU87669.1| peptide chain release factor 2 [Enterococcus faecalis 599]
gi|427185426|emb|CCO72650.1| similar to peptide chain release factor 2, C-terminal [Enterococcus
faecalis str. Symbioflor 1]
gi|429512346|gb|ELA01954.1| peptide chain release factor RF2 [Enterococcus faecalis OG1X]
gi|429516227|gb|ELA05721.1| peptide chain release factor RF2 [Enterococcus faecalis M7]
Length = 327
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++++++ I +DL+I RA G GGQ++NK E+AVRITHIPTG V
Sbjct: 174 HTSFCSVDVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+S LKAKL + E++A E +RG+ ++ WG QIR+YVFHPY
Sbjct: 233 ASQAQRSQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +ET ++ +VMDG+L+ FI +YLK + S
Sbjct: 293 MVKDHRTNYETGNVQAVMDGDLDGFIDAYLKQRLS 327
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+ FWDN AQ+ + +K+K ++D+ + +L +E DA + EE
Sbjct: 2 GEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQE--EYDAEIQEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
I L + L +EL+ LL+ PYD A+I + GAGGT++Q
Sbjct: 60 EERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQ 102
>gi|389817466|ref|ZP_10208153.1| peptide chain release factor 2 [Planococcus antarcticus DSM 14505]
gi|388464590|gb|EIM06920.1| peptide chain release factor 2 [Planococcus antarcticus DSM 14505]
Length = 327
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 154/326 (47%), Gaps = 75/326 (23%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
D FW+N+ AQ + L +K+ +N F ++ ++L E D D E+
Sbjct: 3 DPDFWNNQESAQTVISELNGLKEIVNTYYSFMETQENMEMSLELLREEDDDDL--HEDVN 60
Query: 103 SIIKELNKALDQFELTQLLSGPYDK----------------------------------- 127
+K+ L +ELT LLS PYDK
Sbjct: 61 KDMKQFISDLADYELTMLLSEPYDKNNAILELHPGAGGTESQDWCSMLLRMYTRWAEKRG 120
Query: 128 ------------EGAVISITAGAGGTDA-------------------------QTSFSGA 150
E V S+T G G +A TSF
Sbjct: 121 FKVETLDYLAGDEAGVKSVTLGIRGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180
Query: 151 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 210
EVMP E +++ I EDL++ RA G GGQ++N ++AVRITH+PTG V C +ERS
Sbjct: 181 EVMPEFTGE-IEIDIRTEDLKVDTYRASGAGGQHINTTDSAVRITHLPTGAVVTCQQERS 239
Query: 211 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 270
Q+ N+ KA+ LKAKL + E+ + + +IRG+ + WG QIR+YVFHPY +VKD RT
Sbjct: 240 QIKNREKAMQMLKAKLYTLKVEEEEARLLEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 299
Query: 271 GHETSDIVSVMDGELEPFIKSYLKYK 296
+ET ++ +VMDG+++ FI S L+ K
Sbjct: 300 NYETGNLGAVMDGDIDGFINSLLRSK 325
>gi|392530220|ref|ZP_10277357.1| peptide chain release factor 2 [Carnobacterium maltaromaticum ATCC
35586]
Length = 330
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +V+P + E+++D+QI +DL I RA G GGQ++NK ++AVRITH+PTGV V
Sbjct: 174 HTSFVSIDVIPEM-EDNVDIQINTDDLRIDTYRASGAGGQHINKTDSAVRITHLPTGVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQ+ NK +A+ LKAKL + E++ ++ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 ASQAQRSQMKNKDQAMGMLKAKLYQLELEEKEKQMAEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
++KD RT +ET ++ VMDG+L+PFI +YLK K
Sbjct: 293 MIKDHRTNYETGNVQGVMDGDLDPFIDAYLKSK 325
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINL---LTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
+ FWD+ +AQ + +K+K N L + K ++D + +VK E+ +
Sbjct: 2 GEPGFWDDGIKAQNVINEANIIKEKYNQFQQLAETKEELDLLLEMVKEEEDAELE----- 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+E + LDQFEL LLS PYDK A+I + GAGGT++Q
Sbjct: 57 KELEENLTTFLAVLDQFELDMLLSEPYDKNNAIIELHPGAGGTESQ 102
>gi|227510661|ref|ZP_03940710.1| peptide chain release factor 2 [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227190313|gb|EEI70380.1| peptide chain release factor 2 [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 354
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++ + ++I ++L++ RA G GGQ+VNK +AVRITHIPTG+ V
Sbjct: 196 HTSFASVDVMPEL-DDDVSIKISPDELKVDVYRASGAGGQHVNKTSSAVRITHIPTGIVV 254
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ AL+ LK+KL + E+++A E +I G+ + WG QIR+YVFHPY
Sbjct: 255 ASQAQRSQLQNRQTALNMLKSKLYELEEQKKAEEKAKIEGEQLDIGWGSQIRSYVFHPYS 314
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +ET+++ VMDG+L+PFI +YL+++ S
Sbjct: 315 MVKDHRTNYETANVNGVMDGDLDPFINAYLQWQLS 349
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Query: 38 EMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGL 97
E K A+ FWD++ AQ+ + +K K + ++DD ++L E D+G+
Sbjct: 20 EAKMAEPGFWDDQQAAQKLIDETNQLKTKRDRFDTLTNELDDLKVTLELISE--DPDSGM 77
Query: 98 LEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+E +L K LD+++L LL+G YD A++ I GAGGT+AQ
Sbjct: 78 QDEFIGEADKLKKQLDRYQLGLLLNGKYDHNNAILEIHPGAGGTEAQ 124
>gi|227518951|ref|ZP_03949000.1| peptide chain release factor RF2 [Enterococcus faecalis TX0104]
gi|227553571|ref|ZP_03983620.1| peptide chain release factor RF2 [Enterococcus faecalis HH22]
gi|256961736|ref|ZP_05565907.1| peptide chain release factor 2 [Enterococcus faecalis Merz96]
gi|293383442|ref|ZP_06629355.1| peptide chain release factor 2 [Enterococcus faecalis R712]
gi|293388904|ref|ZP_06633389.1| peptide chain release factor 2 [Enterococcus faecalis S613]
gi|312907729|ref|ZP_07766720.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 512]
gi|312910347|ref|ZP_07769194.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 516]
gi|422714426|ref|ZP_16771152.1| peptide chain release factor 2 [Enterococcus faecalis TX0309A]
gi|422715683|ref|ZP_16772399.1| peptide chain release factor 2 [Enterococcus faecalis TX0309B]
gi|424676570|ref|ZP_18113441.1| peptide chain release factor 2 [Enterococcus faecalis ERV103]
gi|424681614|ref|ZP_18118401.1| peptide chain release factor 2 [Enterococcus faecalis ERV116]
gi|424683804|ref|ZP_18120554.1| peptide chain release factor 2 [Enterococcus faecalis ERV129]
gi|424686292|ref|ZP_18122960.1| peptide chain release factor 2 [Enterococcus faecalis ERV25]
gi|424690436|ref|ZP_18126971.1| peptide chain release factor 2 [Enterococcus faecalis ERV31]
gi|424695530|ref|ZP_18131913.1| peptide chain release factor 2 [Enterococcus faecalis ERV37]
gi|424696732|ref|ZP_18133073.1| peptide chain release factor 2 [Enterococcus faecalis ERV41]
gi|424699882|ref|ZP_18136093.1| peptide chain release factor 2 [Enterococcus faecalis ERV62]
gi|424703104|ref|ZP_18139238.1| peptide chain release factor 2 [Enterococcus faecalis ERV63]
gi|424707399|ref|ZP_18143383.1| peptide chain release factor 2 [Enterococcus faecalis ERV65]
gi|424716941|ref|ZP_18146239.1| peptide chain release factor 2 [Enterococcus faecalis ERV68]
gi|424720519|ref|ZP_18149620.1| peptide chain release factor 2 [Enterococcus faecalis ERV72]
gi|424724067|ref|ZP_18153016.1| peptide chain release factor 2 [Enterococcus faecalis ERV73]
gi|424733659|ref|ZP_18162214.1| peptide chain release factor 2 [Enterococcus faecalis ERV81]
gi|424744042|ref|ZP_18172347.1| peptide chain release factor 2 [Enterococcus faecalis ERV85]
gi|424750450|ref|ZP_18178514.1| peptide chain release factor 2 [Enterococcus faecalis ERV93]
gi|227073640|gb|EEI11603.1| peptide chain release factor RF2 [Enterococcus faecalis TX0104]
gi|227177301|gb|EEI58273.1| peptide chain release factor RF2 [Enterococcus faecalis HH22]
gi|256952232|gb|EEU68864.1| peptide chain release factor 2 [Enterococcus faecalis Merz96]
gi|291079233|gb|EFE16597.1| peptide chain release factor 2 [Enterococcus faecalis R712]
gi|291081685|gb|EFE18648.1| peptide chain release factor 2 [Enterococcus faecalis S613]
gi|310626757|gb|EFQ10040.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 512]
gi|311289620|gb|EFQ68176.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 516]
gi|315576028|gb|EFU88219.1| peptide chain release factor 2 [Enterococcus faecalis TX0309B]
gi|315580603|gb|EFU92794.1| peptide chain release factor 2 [Enterococcus faecalis TX0309A]
gi|402350713|gb|EJU85611.1| peptide chain release factor 2 [Enterococcus faecalis ERV116]
gi|402356582|gb|EJU91313.1| peptide chain release factor 2 [Enterococcus faecalis ERV103]
gi|402364169|gb|EJU98612.1| peptide chain release factor 2 [Enterococcus faecalis ERV129]
gi|402364279|gb|EJU98721.1| peptide chain release factor 2 [Enterococcus faecalis ERV31]
gi|402367826|gb|EJV02163.1| peptide chain release factor 2 [Enterococcus faecalis ERV25]
gi|402368225|gb|EJV02545.1| peptide chain release factor 2 [Enterococcus faecalis ERV37]
gi|402375381|gb|EJV09368.1| peptide chain release factor 2 [Enterococcus faecalis ERV62]
gi|402377061|gb|EJV10972.1| peptide chain release factor 2 [Enterococcus faecalis ERV41]
gi|402384997|gb|EJV18538.1| peptide chain release factor 2 [Enterococcus faecalis ERV65]
gi|402385109|gb|EJV18649.1| peptide chain release factor 2 [Enterococcus faecalis ERV63]
gi|402386289|gb|EJV19795.1| peptide chain release factor 2 [Enterococcus faecalis ERV68]
gi|402391272|gb|EJV24583.1| peptide chain release factor 2 [Enterococcus faecalis ERV81]
gi|402392990|gb|EJV26220.1| peptide chain release factor 2 [Enterococcus faecalis ERV72]
gi|402396048|gb|EJV29123.1| peptide chain release factor 2 [Enterococcus faecalis ERV73]
gi|402399465|gb|EJV32337.1| peptide chain release factor 2 [Enterococcus faecalis ERV85]
gi|402406749|gb|EJV39295.1| peptide chain release factor 2 [Enterococcus faecalis ERV93]
Length = 327
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++++++ I +DL+I RA G GGQ++NK E+AVRITHIPTG V
Sbjct: 174 HTSFCSVDVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+S LKAKL + E++A E +RG+ ++ WG QIR+YVFHPY
Sbjct: 233 ASQAQRSQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +ET ++ +VMDG+L+ FI +YLK + S
Sbjct: 293 MVKDHRTNYETGNVQAVMDGDLDGFIDAYLKQRLS 327
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+ FWDN AQ+ + +K+K ++D+ + +L +E DA + EE
Sbjct: 2 GEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEEIDELTVMFELQQE--EYDAEIQEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
I L + L +EL+ LL+ PYD A+I + GAGGT++Q
Sbjct: 60 EERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQ 102
>gi|422869151|ref|ZP_16915671.1| peptide chain release factor 2 [Enterococcus faecalis TX1467]
gi|329571835|gb|EGG53513.1| peptide chain release factor 2 [Enterococcus faecalis TX1467]
Length = 327
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++++++ I +DL+I RA G GGQ++NK E+AVRITHIPTG V
Sbjct: 174 HTSFCSVDVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+S LKAKL + E++A E +RG+ ++ WG QIR+YVFHPY
Sbjct: 233 ASQAQRSQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +ET ++ +VMDG+L+ FI +YLK + S
Sbjct: 293 MVKDHRTNYETGNVQAVMDGDLDGFIDAYLKQRLS 327
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+ FWDN AQ+ + +K+K ++D+ + +L +E D + EE
Sbjct: 2 GEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQE--EYDTEIQEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
I L + L +EL+ LL+ PYD A+I + GAGGT++Q
Sbjct: 60 EERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQ 102
>gi|303233066|ref|ZP_07319741.1| peptide chain release factor 2 [Atopobium vaginae PB189-T1-4]
gi|302480841|gb|EFL43926.1| peptide chain release factor 2 [Atopobium vaginae PB189-T1-4]
Length = 420
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 109/154 (70%), Gaps = 2/154 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QT+F+G EV+P+LPEE+ DV+I +D+ + A G GGQ VN ++AVR+TH+P+G+ V
Sbjct: 263 QTTFAGVEVIPVLPEET-DVEINPQDVRVDVFHASGPGGQGVNTTDSAVRLTHMPSGIVV 321
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQL NK A+ LKA+L + +QRA+++ ++G WG QIRNY+ +P++
Sbjct: 322 SCQNERSQLQNKAAAMEILKARLYELQRQQRATQLNDLKGLTTTISWGNQIRNYILYPFQ 381
Query: 264 LVKDVRTGHETSDIVSVM-DGELEPFIKSYLKYK 296
LVKD RT ET ++ +V+ +G L+PFI +YL++K
Sbjct: 382 LVKDTRTQVETGNVDAVLQEGNLDPFIIAYLRWK 415
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 74/183 (40%), Gaps = 49/183 (26%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
++ + R+ ++ + L ++ ++AELE + A FW + A A +T+ LT++K +
Sbjct: 9 IDGVTQRLSDVERALQLDTMQTKIAELEAECAKEDFWGDPARASKTMATLTNLKQTQATM 68
Query: 71 TDFKTKMDDAVTIVKLT-EEM---------------------DSTDAG------------ 96
D +DD V + +EM ++T +G
Sbjct: 69 RDAHALLDDLVVAYEFALDEMQNAALPVSGLDISHPHDAAASEATTSGEARSISHIPAAS 128
Query: 97 ---------------LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGT 141
++ EA K L LD+ EL + PYD+ A+++I G GG
Sbjct: 129 DAASPADTAAQAQSDMMREAQHTYKTLTGLLDELELNRWFCDPYDQGDAIVTIKPGQGGL 188
Query: 142 DAQ 144
+AQ
Sbjct: 189 EAQ 191
>gi|269128206|ref|YP_003301576.1| peptide chain release factor 2 [Thermomonospora curvata DSM 43183]
gi|268313164|gb|ACY99538.1| peptide chain release factor 2 [Thermomonospora curvata DSM 43183]
Length = 378
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 176/345 (51%), Gaps = 72/345 (20%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTK---- 76
I A L + E+A+L ++AD W ++ AQ+ + L+ +++++N +T + +
Sbjct: 20 IEAVLDLDAMRAEIAKLREESADPDLWSDQERAQQVTRRLSYLENELNRVTSLRQRLEDV 79
Query: 77 ---------MDDAVTIVKLTEEMDS--TDAGLLE-------------------------E 100
MDDA T + E++S D LE +
Sbjct: 80 ATLYELAEEMDDADTRAEADAELESLRKDIQQLEVRTLMSGEYDHREALITINAQAGGVD 139
Query: 101 AASIIKELNKALDQFE-----LTQLLSGPYDKEGAVISIT------------AGAGGTDA 143
AA ++L + ++ T++ Y +E + S T G GT
Sbjct: 140 AADWAQQLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFAVKAPYAYGTLRGEHGTHR 199
Query: 144 -------------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
QTSF+G +V+P++ E+S V++ E DL I R+ G GGQ VN ++
Sbjct: 200 LVRISPFDNQGRRQTSFAGLDVVPVV-EQSDHVEVDENDLRIDVYRSSGPGGQGVNTTDS 258
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITHIPTG+ V C ERSQL NK A++ LKAKLL ++ A+++ +RG+ + W
Sbjct: 259 AVRITHIPTGIVVSCQNERSQLQNKATAMAVLKAKLLERKRQEEAAKMADLRGEGTSS-W 317
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
G QIRNYV HPY++VKD+RTG E+ + +V+DGE++ FI++ +++
Sbjct: 318 GTQIRNYVLHPYQIVKDLRTGVESGNPAAVLDGEIDEFIEAEIRW 362
>gi|330839015|ref|YP_004413595.1| Peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
gi|329746779|gb|AEC00136.1| Peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
Length = 368
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS ++MP + +++++V I D+ + RA G GGQ++NK +AVR+TH+PTG+ V
Sbjct: 212 HTSFSACDIMPEI-DDAVEVAINMADVRVDTYRASGAGGQHINKTSSAVRMTHMPTGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL N+ + + L+AKL + +E++ +EI+++ GD K EWG QIR+YVF PY
Sbjct: 271 QCQNERSQLQNREQCMKMLRAKLFELEQEKKEAEIQKLEGDQQKIEWGSQIRSYVFQPYT 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD+RTG ET ++ +VMDG+L+ FI+++L K
Sbjct: 331 MVKDMRTGMETGNVQAVMDGDLDAFIEAFLAAK 363
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+ + ++ A +++E+ S + + E+++AELE K + +FWDN EAQ+ Q L +K
Sbjct: 4 DWKPEILAMQAKLKEMGDSLDVARKEEKIAELEYKMGEPTFWDNAEEAQKINQELAAIKG 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ + +K DDA ++++ ++ D L E + + + A+ + EL LLSGPY
Sbjct: 64 SVDKYKEIVSKTDDAQALLEMA--LEENDTSLEPEVQTEFETIKTAVRELELEVLLSGPY 121
Query: 126 DKEGAVISITAGAGGTDAQ 144
D A++++ AGAGGT+AQ
Sbjct: 122 DANNAILTLHAGAGGTEAQ 140
>gi|400289919|ref|ZP_10791946.1| peptide chain release factor 2 [Streptococcus ratti FA-1 = DSM
20564]
gi|399920710|gb|EJN93527.1| peptide chain release factor 2 [Streptococcus ratti FA-1 = DSM
20564]
Length = 336
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V I +ED+++ R+GG GGQNVNKV T VR+TH+PTG+ V
Sbjct: 183 HTSFASVEVMPEL-DDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHVPTGIVV 241
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 242 ASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 301
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RTG+E + + VMDG+L+ FI ++LK++
Sbjct: 302 MVKDHRTGYEVAQVDKVMDGDLDGFIDAFLKWR 334
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+E+A LE + + FWD+ AQ+T Q L D+K K + + ++ D+A + +L +E
Sbjct: 1 MEEEIALLENRMTEPDFWDDNLSAQKTSQELNDLKLKYDTFHNMESLSDEAEILYELADE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S A L + +++L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 EPSMQADLEDS----LEKLDKMMSSYEMTLLLSEPYDANNAILEIHPGSGGTEAQ 111
>gi|260887225|ref|ZP_05898488.1| peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
gi|260863287|gb|EEX77787.1| peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
Length = 330
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS ++MP + +++++V I D+ + RA G GGQ++NK +AVR+TH+PTG+ V
Sbjct: 174 HTSFSACDIMPEI-DDAVEVAINMADVRVDTYRASGAGGQHINKTSSAVRMTHMPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL N+ + + L+AKL + +E++ +EI+++ GD K EWG QIR+YVF PY
Sbjct: 233 QCQNERSQLQNREQCMKMLRAKLFELEQEKKEAEIQKLEGDQQKIEWGSQIRSYVFQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD+RTG ET ++ +VMDG+L+ FI+++L K
Sbjct: 293 MVKDMRTGMETGNVQAVMDGDLDAFIEAFLAAK 325
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+ +FWDN EAQ+ Q L +K ++ + +K DDA ++++ ++ D L E
Sbjct: 2 GEPTFWDNAEEAQKINQELAAIKGSVDKYKEIVSKTDDAQALLEMA--LEENDTSLEPEV 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ + + A+ + EL LLSGPYD A++++ AGAGGT+AQ
Sbjct: 60 QTEFETIKTAVRELELEVLLSGPYDANNAILTLHAGAGGTEAQ 102
>gi|257082363|ref|ZP_05576724.1| peptide chain release factor 2 [Enterococcus faecalis E1Sol]
gi|256990393|gb|EEU77695.1| peptide chain release factor 2 [Enterococcus faecalis E1Sol]
Length = 327
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++++++ I +DL+I RA G GGQ++NK E+AVRITHIPTG V
Sbjct: 174 HTSFCSVDVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+S LKAKL + E++A E +RG+ ++ WG QIR+YVFHPY
Sbjct: 233 ASQAQRSQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +ET ++ +VMDG+L+ FI +YLK + S
Sbjct: 293 MVKDHRTNYETGNVQAVMDGDLDGFIDAYLKQRLS 327
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+ FWDN AQ+ + +K+K ++D+ + +L +E DA + EE
Sbjct: 2 GEPGFWDNIETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQE--EYDAEIQEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
I L + L +EL+ LL+ PYD A+I + GAGGT++Q
Sbjct: 60 EERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQ 102
>gi|374709249|ref|ZP_09713683.1| peptide chain release factor 2 [Sporolactobacillus inulinus CASD]
Length = 324
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 157/321 (48%), Gaps = 75/321 (23%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ +AQ+ + ++K K++ LTD + K +D +L +E DA L E +
Sbjct: 4 FWDDNEKAQKVIDESNELKGKVDSLTDLQNKFEDLQVAYELVKE--ENDADLKAELEESL 61
Query: 106 KELNKALDQFELTQLLSGPYDK-------------------------------------- 127
E A +++E LLS P+D+
Sbjct: 62 GEARDAFNRYETRLLLSAPHDRNNAILELHPGAGGTEAQDWASMLLRMYTRWAERKGFAV 121
Query: 128 ---------EGAVISITAGAGGTDA-------------------------QTSFSGAEVM 153
E V S+T GTDA TSF EV+
Sbjct: 122 ETLDYLPGDEAGVKSVTLLIKGTDAYGYLKAEKGIHRLVRISPFDAAGRRHTSFVSCEVV 181
Query: 154 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 213
P L ++ +++++ EDL + R+ G GGQ++NK +AVR+TH+PTG+ V C ERSQ
Sbjct: 182 PEL-DDDIEIEVRPEDLRVDVFRSSGAGGQHINKTSSAVRMTHLPTGIVVSCQSERSQFQ 240
Query: 214 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 273
N+ +A+ LK++L + EE++ +E+ + G+ + WG QIR+YVFHPY +VKD RT E
Sbjct: 241 NRDQAMKMLKSRLFQLEEEKKEAEMAALHGEQKEIGWGSQIRSYVFHPYSMVKDHRTNVE 300
Query: 274 TSDIVSVMDGELEPFIKSYLK 294
++ VMDG+++PFI +YL+
Sbjct: 301 IGNVDRVMDGDIDPFIDAYLR 321
>gi|291459037|ref|ZP_06598427.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 078
str. F0262]
gi|291418291|gb|EFE92010.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 078
str. F0262]
Length = 378
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/365 (31%), Positives = 175/365 (47%), Gaps = 71/365 (19%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQ------ 54
M +F + ++ ++ +E + AS L+ K + EL+ + FW + A
Sbjct: 1 MIEFDQFKYELSTKAEPLEHLGASLDLENKRKRILELDRMMEEPDFWTDPERANRLSTEN 60
Query: 55 -------ETLQALTDVKDKIN--------------------LLTDFKTKMDDAVTIVKLT 87
E+ Q+L D I LL++F K+D T + L+
Sbjct: 61 HHLKNELESYQSLKQSYDDIGALIEMGVEEGDESVIPEIRELLSEFSEKLDSMSTQLLLS 120
Query: 88 EEMDSTDAGLLEEAASIIKELN---------------------KALDQFE--------LT 118
E D+ +A L A + E N K LD E +T
Sbjct: 121 GEYDAMNAILRLNAGAGGTEANDWAGMLYRMYTRWAERRGFGIKILDYLEGEEAGIKSVT 180
Query: 119 QLLSGPY-----DKEGAV---ISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDL 170
+ G Y E + + I+ QTSF +VMP + E +DV I EED+
Sbjct: 181 MEIDGDYAYGYLRSESGIHRLVRISPFNAQGKRQTSFVSCDVMPDI-ETDIDVDIREEDI 239
Query: 171 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 230
++ R+ G GGQ++NK +AVR+ HIPTG V C EERSQL N+ KA+ LKAKL +
Sbjct: 240 KMEVFRSSGAGGQHINKTSSAVRLIHIPTGFVVACQEERSQLQNRQKAMQMLKAKLYIKE 299
Query: 231 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 290
+E++ +++ IRG+ WG QIR+YV PY++VKD+RTG ET + +V+DG+++ FI
Sbjct: 300 KEEQEAKLAGIRGEVKDNGWGSQIRSYVLQPYRMVKDLRTGEETGNTDAVLDGDIDRFIT 359
Query: 291 SYLKY 295
+YLK+
Sbjct: 360 AYLKW 364
>gi|227513676|ref|ZP_03943725.1| peptide chain release factor 2 [Lactobacillus buchneri ATCC 11577]
gi|227524821|ref|ZP_03954870.1| peptide chain release factor 2 [Lactobacillus hilgardii ATCC 8290]
gi|227083087|gb|EEI18399.1| peptide chain release factor 2 [Lactobacillus buchneri ATCC 11577]
gi|227088036|gb|EEI23348.1| peptide chain release factor 2 [Lactobacillus hilgardii ATCC 8290]
Length = 354
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++ + ++I ++L++ RA G GGQ+VNK +AVRITHIPTG+ V
Sbjct: 196 HTSFASVDVMPEL-DDDVSIKISPDELKVDVYRASGAGGQHVNKTSSAVRITHIPTGIVV 254
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ AL+ LK+KL + E+++A E +I G+ + WG QIR+YVFHPY
Sbjct: 255 ASQAQRSQLQNRQTALNMLKSKLYELEEQKKAEEKAKIEGEQLDIGWGSQIRSYVFHPYS 314
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +ET+++ VMDG+L+PFI +YL+++ S
Sbjct: 315 MVKDHRTNYETANVNGVMDGDLDPFINAYLQWQLS 349
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 2/107 (1%)
Query: 38 EMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGL 97
E K A+ FWD++ AQ+ + +K K + ++DD ++L E D+G+
Sbjct: 20 EAKMAEPGFWDDQQAAQKMIDETNQLKTKRDRFNTLTKELDDLKVTLELISE--DPDSGM 77
Query: 98 LEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+E +L K LD+++L LL+G YD A++ I GAGGT+AQ
Sbjct: 78 QDEFIGEADKLKKQLDRYQLGLLLNGKYDHNNAILEIHPGAGGTEAQ 124
>gi|262037715|ref|ZP_06011157.1| peptide chain release factor 2 [Leptotrichia goodfellowii F0264]
gi|261748187|gb|EEY35584.1| peptide chain release factor 2 [Leptotrichia goodfellowii F0264]
Length = 348
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/350 (33%), Positives = 172/350 (49%), Gaps = 80/350 (22%)
Query: 21 IRASAG---LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK------DKINLLT 71
+R S G L L ++ +E K A+ FW NR +QETL+ L +K +KI+ +
Sbjct: 1 MRKSGGIFDLDSLNLKIERIEKKTAEPDFW-NRENSQETLKELNILKKLIEEYEKISGMN 59
Query: 72 D---------------FKTKMDDAVTIVK-----------LTEEMDSTDAGLL------- 98
+ F+ ++DD + V L E+ DS +A L
Sbjct: 60 EDVSVMIEFIEAGDDSFEKELDDKIDTVTEEIQNFKTKLLLDEKYDSNNAILTINAGAGG 119
Query: 99 EEAASIIKELNKALDQF--------ELTQLLSGPYDKEGAVISITAGAGGTDA------- 143
EA + L + D++ E+ LSG +E + SIT G+ A
Sbjct: 120 TEACDWTEMLYRMYDRWSNRKDFKVEVLDSLSG---EEAGIKSITLNIKGSYAYGYLKGE 176
Query: 144 ------------------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 185
TSF+ V+P + ++ ++V I EDL++ RA G GGQ+V
Sbjct: 177 KGVHRLVRISPFDSNGKRHTSFTAVNVVPEI-DDDVEVNIRPEDLKVDTYRASGAGGQHV 235
Query: 186 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 245
N ++AVRITHIPT V C +ERSQL NK A+ LK++L I E+R E++ I+G
Sbjct: 236 NTTDSAVRITHIPTNTVVTCQKERSQLKNKETAMKILKSRLFEIELEKREKEMENIKGTE 295
Query: 246 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
K EWG QIR+YVF PYK+VKD RT E ++ VMDG+++ FI YLK+
Sbjct: 296 SKIEWGSQIRSYVFQPYKMVKDHRTKAEEGNVDKVMDGDIDSFINEYLKF 345
>gi|312621634|ref|YP_004023247.1| hypothetical protein Calkro_0529 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202101|gb|ADQ45428.1| hypothetical protein Calkro_0529 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 372
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P + E+ D++I EEDLEI R+ G GGQ+VNK E+AVRI HIPTG+ V
Sbjct: 214 HTSFAAVEVLPEV-EDDTDIEIKEEDLEIDTYRSSGAGGQHVNKTESAVRIKHIPTGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ N+ AL LKAKLL + E++R +I++++G+ + WG QIR+YVF PY
Sbjct: 273 TCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQTEIGWGNQIRSYVFCPYT 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE++ FI +YLK
Sbjct: 333 LVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 78/134 (58%), Gaps = 2/134 (1%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
+E A + ++E+R S + LE EL LE + + FW + +Q+ LQ + +KDKI
Sbjct: 11 LEKAEEDLKEMRVSLDIDGLESELKSLENETSKPEFWQDIENSQKVLQKIKRIKDKIERF 70
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
++ +D + +L+ ++ + + EE + L + +D+F++ LL+GPYDK A
Sbjct: 71 QKLYSQWEDLKVLTELS--IEEGNHEMSEELEKELISLERKIDEFKIEILLNGPYDKNNA 128
Query: 131 VISITAGAGGTDAQ 144
++SI AGAGGT+AQ
Sbjct: 129 ILSIHAGAGGTEAQ 142
>gi|387909591|ref|YP_006339897.1| peptide chain release factor 2 [Streptococcus thermophilus
MN-ZLW-002]
gi|387574526|gb|AFJ83232.1| peptide chain release factor 2 [Streptococcus thermophilus
MN-ZLW-002]
Length = 337
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 183 HTSFTSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 241
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 242 ASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYT 301
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RTG+E + + V+DG++E FI +YLK++
Sbjct: 302 MVKDHRTGYEVAQVDKVIDGDIEGFIDAYLKWR 334
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE + + FW++ AQ+T Q L ++K K + K D+ +++ EE
Sbjct: 1 MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKIKYETFNNMKELSDETELYLEMLEE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
DS E +++L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 DDSVQE----ELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 111
>gi|339641449|ref|ZP_08662893.1| peptide chain release factor 2 [Streptococcus sp. oral taxon 056
str. F0418]
gi|339454718|gb|EGP67333.1| peptide chain release factor 2 [Streptococcus sp. oral taxon 056
str. F0418]
Length = 325
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 113/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L ++++++++ ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEIEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E + + VMDG+L+ FI +YLK++
Sbjct: 291 MVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 323
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K D++ ++ E D + EE +
Sbjct: 6 FWDDNIAAQKTSQELNELKQTYENFHQMTDLFDESEILLDFLAE----DESVQEELEEKL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 AELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQ 100
>gi|134300908|ref|YP_001114404.1| peptide chain release factor 2 [Desulfotomaculum reducens MI-1]
gi|134053608|gb|ABO51579.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfotomaculum
reducens MI-1]
Length = 332
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+PL+ +E ++V I EDL I RAGG GGQ+VNK ++AVRITH+PTG+ V
Sbjct: 174 HTSFASVDVLPLVDDE-VEVNIRPEDLRIDTYRAGGAGGQHVNKTDSAVRITHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ N+ A+ LK+KL+ + +++ E+ +RG+ WG QIR+YVFHPY
Sbjct: 233 ACQNERSQTTNRQAAMKLLKSKLIDLELQKKEDEMAALRGEQKDIAWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
L KD RTG ET ++ +VMDG + F+ +YLKY
Sbjct: 293 LAKDHRTGEETGNVNAVMDGNIGQFVTAYLKY 324
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 45 SFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASI 104
FWD+ +Q+ Q L +KD++ ++ + D +++L +E D L EE +S
Sbjct: 5 GFWDDLTYSQKVSQKLAGLKDRVAAFNTLESSLQDLEVMLELCQE--EQDPLLEEEFSSE 62
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ L L++ EL +L+GPYD+ A++S+ GAGGT++Q
Sbjct: 63 LSTLTGRLEEMELEIMLAGPYDRGDAILSLHPGAGGTESQ 102
>gi|307723715|ref|YP_003903466.1| hypothetical protein Thet_0528 [Thermoanaerobacter sp. X513]
gi|307580776|gb|ADN54175.1| hypothetical protein Thet_0528 [Thermoanaerobacter sp. X513]
Length = 368
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 120/188 (63%), Gaps = 9/188 (4%)
Query: 117 LTQLLSGPY-----DKEGAV---ISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEE 168
+T ++ GP+ E V + I+ TSF+ EV+P L E ++V+I E
Sbjct: 177 VTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEVLPEL-ENDIEVEIRPE 235
Query: 169 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 228
DL+I RA G GGQ VNK E+AVRITH+PTG+ V C ERSQ+ N+ A+ LKAKLL
Sbjct: 236 DLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLD 295
Query: 229 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 288
+ +++ +I+ ++G+ +A WG QIR+YVF PY LVKD RT +E ++ +VMDGE++ F
Sbjct: 296 LMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGF 355
Query: 289 IKSYLKYK 296
I +YLK K
Sbjct: 356 INAYLKQK 363
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 83/144 (57%), Gaps = 5/144 (3%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+QD+ + +V + ++E+ S ++ +++E+ E++ K +D +FW + ++QE +
Sbjct: 2 LQDY---KAEVSNMIEEIKEMGVSLDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQ 58
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+K+ + +K +D T+++L ++ D + +E KEL K L+ ++ L
Sbjct: 59 KALKELLEEYNSLVSKWEDLSTLIELG--LEEGDESITDEVDKEYKELKKKLEDLKIKTL 116
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
L+G YDK A++SI AG+GGT+AQ
Sbjct: 117 LNGLYDKNNAILSIHAGSGGTEAQ 140
>gi|260892371|ref|YP_003238468.1| PE-PGRS family protein [Ammonifex degensii KC4]
gi|260864512|gb|ACX51618.1| PE-PGRS family protein [Ammonifex degensii KC4]
Length = 377
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + +++ +++I E+L I RA G GGQ+VNK ETAVRITH+PTG+TV
Sbjct: 212 HTSFASVDVLPAVKDDT-EIKIAPEELRIDTFRASGAGGQHVNKTETAVRITHLPTGITV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ ANK A+ L+A+LL + ++R E+ +RG+ + WG QIR YV HPY
Sbjct: 271 TCQSERSQSANKAAAMEILRARLLDLKIKEREKELAALRGEVKEIAWGNQIRTYVLHPYT 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RTG E DI +V+DG+++ FI++YLK
Sbjct: 331 LVKDHRTGVERRDIQAVLDGDIDDFIRAYLK 361
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L +++E ++R++ + S L Q EK LA LE + FW + A AQ Q + ++
Sbjct: 5 LERELEVLAERLKYLEDSLDLAQKEKRLALLEKEMEAPDFWRDLARAQAVTQEVASLRQC 64
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + ++ +++L E DA +L E A +K+L ++ E+ LLSGPYD
Sbjct: 65 LGRFYRLREGHEELSVLLELAAE--EGDAQVLAELAQDVKKLAGEIEDLEVELLLSGPYD 122
Query: 127 KEGAVISITAGAGGTDAQ 144
A++S+ AGAGGTDAQ
Sbjct: 123 ASNAIVSLHAGAGGTDAQ 140
>gi|347750934|ref|YP_004858499.1| peptide chain release factor 2 [Bacillus coagulans 36D1]
gi|347583452|gb|AEO99718.1| peptide chain release factor 2 [Bacillus coagulans 36D1]
Length = 327
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP + +++++V++ EDL + RA G GGQ++NK +AVRITHIPTG+ V
Sbjct: 174 HTSFVSCEVMPEI-DDNIEVEVRPEDLRVDTYRASGAGGQHINKTSSAVRITHIPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LKAKL E++ ++ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 SCQSERSQIQNREQAMKMLKAKLYQKEVEEKEKQLAEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDGE++PFI +YL+
Sbjct: 293 MVKDHRTNVETGNVQAVMDGEIDPFIDAYLR 323
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FWD++ EAQ+ + +K+ +N + +++ +D +L +E D+ L EE
Sbjct: 3 EPNFWDDQQEAQKIINESNALKEMVNGYRELESQQEDLEVTHELAKE--ENDSELKEELE 60
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ ++ + L+++EL LL+GPYD A++ + GAGGT++Q
Sbjct: 61 AELEAFTEKLNEYELQLLLNGPYDANNAILELHPGAGGTESQ 102
>gi|51891274|ref|YP_073965.1| peptide chain release factor 2 [Symbiobacterium thermophilum IAM
14863]
gi|51854963|dbj|BAD39121.1| peptide chain release factor 2 [Symbiobacterium thermophilum IAM
14863]
Length = 308
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 110/159 (69%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP + ++ D++I EDL I R+ G GGQ+VNK E+AVRITH+PTG+ V
Sbjct: 148 HTSFAAVEVMPEIEDDVDDIEIRPEDLRIDTFRSSGAGGQHVNKTESAVRITHLPTGIVV 207
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C +ERSQ+ N+ A+ L++KL+ + E++ E+ QIRG ++ WG QIR+YVF PY
Sbjct: 208 SCQQERSQMQNRAVAMMMLRSKLVELKIEEQNKEMAQIRGPQMEIAWGSQIRSYVFQPYT 267
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLS 302
LVKD R+G E + +V+DGEL+PFI YL+ + + L+
Sbjct: 268 LVKDHRSGVEVGNAQAVIDGELDPFIYGYLEKRANGELA 306
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Query: 70 LTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEG 129
L F+ ++DD ++ L EE ++DA + EA + L + + QFEL LL+G YD
Sbjct: 4 LESFRRRLDDLEVMIDLAEE--ASDAEMAAEARAEADALEEQVRQFELQVLLNGKYDAYN 61
Query: 130 AVISITAGAGGTDAQ 144
A+++I AGAGGT+AQ
Sbjct: 62 AILTIHAGAGGTEAQ 76
>gi|222530070|ref|YP_002573952.1| hypothetical protein Athe_2103 [Caldicellulosiruptor bescii DSM
6725]
gi|222456917|gb|ACM61179.1| hypothetical protein Athe_2103 [Caldicellulosiruptor bescii DSM
6725]
Length = 372
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P + E+ D++I EEDLEI R+ G GGQ+VNK E+AVRI HIPTG+ V
Sbjct: 214 HTSFAAVEVLPEV-EDDTDIEIKEEDLEIDTYRSSGAGGQHVNKTESAVRIKHIPTGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ N+ AL LKAKLL + E++R +I++++G+ + WG QIR+YVF PY
Sbjct: 273 TCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQTEIGWGNQIRSYVFCPYT 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE++ FI +YLK
Sbjct: 333 LVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 75/134 (55%), Gaps = 2/134 (1%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
+E A + ++E+ + LE EL LE + + FW + +Q LQ + +KDKI
Sbjct: 11 LEKAEEDLKEMGFLFDIDGLESELKSLETETSKPEFWQDIENSQRILQKIKRIKDKIERF 70
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
++ +D + +L+ ++ + + EE + L + +D+F++ LL+GPYDK A
Sbjct: 71 QKLYSQWEDLKVLTELS--IEEGNHEMSEELEKELISLERKIDEFKIEILLNGPYDKNNA 128
Query: 131 VISITAGAGGTDAQ 144
++SI AGAGGT+AQ
Sbjct: 129 ILSIHAGAGGTEAQ 142
>gi|300913271|ref|ZP_07130588.1| hypothetical protein Teth561_PD0069 [Thermoanaerobacter sp. X561]
gi|300889956|gb|EFK85101.1| hypothetical protein Teth561_PD0069 [Thermoanaerobacter sp. X561]
Length = 368
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 120/188 (63%), Gaps = 9/188 (4%)
Query: 117 LTQLLSGPY-----DKEGAV---ISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEE 168
+T ++ GP+ E V + I+ TSF+ EV+P L E ++V+I E
Sbjct: 177 VTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEVLPEL-ENDIEVEIRPE 235
Query: 169 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 228
DL+I RA G GGQ VNK E+AVRITH+PTG+ V C ERSQ+ N+ A+ LKAKLL
Sbjct: 236 DLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLD 295
Query: 229 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 288
+ +++ +I+ ++G+ +A WG QIR+YVF PY LVKD RT +E ++ +VMDGE++ F
Sbjct: 296 LMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGF 355
Query: 289 IKSYLKYK 296
I +YLK K
Sbjct: 356 INAYLKQK 363
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 76/134 (56%), Gaps = 5/134 (3%)
Query: 14 ASDRVEEIRASAGLQQLE---KELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
S+ +EEI+ L +E +E+ E++ K +D +FW + ++QE + +K+ +
Sbjct: 9 VSNMIEEIKKWGFLFDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQKALKELLEEY 68
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
+K +D T+++L ++ D + +E KEL K L+ ++ LL+G YDK A
Sbjct: 69 NSLVSKWEDLSTLIELG--LEEGDESITDEVDKEYKELKKKLEDLKIKTLLNGLYDKNNA 126
Query: 131 VISITAGAGGTDAQ 144
++SI AG+GGT+AQ
Sbjct: 127 ILSIHAGSGGTEAQ 140
>gi|338211299|ref|YP_004655352.1| peptide chain release factor 2 [Runella slithyformis DSM 19594]
gi|336305118|gb|AEI48220.1| peptide chain release factor 2 [Runella slithyformis DSM 19594]
Length = 358
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/150 (52%), Positives = 103/150 (68%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ PL+ ++S+++ + DL+ R+GG GGQNVNKVETAVR+ H P+G+ +
Sbjct: 207 HTSFASVYAYPLI-DDSIEIDVNPADLDWDTYRSGGAGGQNVNKVETAVRVRHKPSGLVI 265
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C +ERSQ N+ AL LK+KL I E+R + ++ K EWG QIRNYV HPYK
Sbjct: 266 ECQQERSQHLNRDLALRLLKSKLYQIEVEKRNAARAEVEASKKKIEWGSQIRNYVMHPYK 325
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRTG ETSD+ VMDG+L+ FIK+YL
Sbjct: 326 LVKDVRTGVETSDVQGVMDGDLDEFIKAYL 355
>gi|320116558|ref|YP_004186717.1| peptide chain release factor 2 [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|319929649|gb|ADV80334.1| Peptide chain release factor 2 [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 368
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 120/188 (63%), Gaps = 9/188 (4%)
Query: 117 LTQLLSGPY-----DKEGAV---ISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEE 168
+T ++ GP+ E V + I+ TSF+ EV+P L E ++V+I E
Sbjct: 177 VTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEVLPEL-ENDIEVEIRPE 235
Query: 169 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 228
DL+I RA G GGQ VNK E+AVRITH+PTG+ V C ERSQ+ N+ A+ LKAKLL
Sbjct: 236 DLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLD 295
Query: 229 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 288
+ +++ +I+ ++G+ +A WG QIR+YVF PY LVKD RT +E ++ +VMDGE++ F
Sbjct: 296 LMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGF 355
Query: 289 IKSYLKYK 296
I +YLK K
Sbjct: 356 INAYLKQK 363
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 84/144 (58%), Gaps = 5/144 (3%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+QD+ + +V + V+E+ S ++ +++E+ E++ K +D +FW + ++QE +
Sbjct: 2 LQDY---KAEVSNMIEEVKEMGVSLDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQ 58
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+K+ + +K +D T+++L ++ D + +E KEL K L+ ++ L
Sbjct: 59 KALKELLEEYNSLVSKWEDLSTLIELG--LEEGDESITDEVDKEYKELKKKLEDLKIKTL 116
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
L+GPYDK A++SI AG+GGT+AQ
Sbjct: 117 LNGPYDKNNAILSIHAGSGGTEAQ 140
>gi|421229402|ref|ZP_15686078.1| peptide chain release factor 2 [Streptococcus pneumoniae 2061376]
gi|395596906|gb|EJG57115.1| peptide chain release factor 2 [Streptococcus pneumoniae 2061376]
Length = 273
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 114/155 (73%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 120 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 178
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 179 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 238
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +E + + VMDG+L+ FI +YLK++ S
Sbjct: 239 MVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWRIS 273
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +E + + EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 1 MHDELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 48
>gi|336113350|ref|YP_004568117.1| peptide chain release factor 2 [Bacillus coagulans 2-6]
gi|335366780|gb|AEH52731.1| peptide chain release factor 2 [Bacillus coagulans 2-6]
Length = 331
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP + +++++V++ EDL + RA G GGQ++NK +AVRITHIPTG+ V
Sbjct: 178 HTSFVSCEVMPEI-DDNIEVEVRPEDLRVDTYRASGAGGQHINKTSSAVRITHIPTGIVV 236
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LKAKL E++ ++ +IRG+ + WG QIR+YVFHPY
Sbjct: 237 SCQSERSQIQNREQAMKMLKAKLYQKEVEEKEKQLAEIRGEQKEIGWGSQIRSYVFHPYS 296
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDGE++PFI +YL+
Sbjct: 297 MVKDHRTNVETGNVQAVMDGEIDPFIDAYLR 327
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E + + +FWD++ EAQ+ + +K+ +N + +++ +D +L +E D
Sbjct: 1 MEERMLEPNFWDDQQEAQKIINESNALKEMVNGYRELESQQEDLEVTYELAKE--ENDQE 58
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L EE + ++ + L+++EL LL+GPYD A++ + GAGGT++Q
Sbjct: 59 LKEELEAELEGFTEKLNEYELQLLLNGPYDANNAILELHPGAGGTESQ 106
>gi|171780065|ref|ZP_02920969.1| hypothetical protein STRINF_01853 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281413|gb|EDT46848.1| peptide chain release factor 2 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 336
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T +R+THIPTG+ V
Sbjct: 183 HTSFSSVEVMPEL-DDTVEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGIRLTHIPTGIVV 241
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 242 ASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 301
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RTG+E + + VMDG+++ FI ++LK++
Sbjct: 302 MVKDHRTGYEVAQVDKVMDGDIDGFIDAFLKWR 334
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 4/115 (3%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE K + FW++ AQ+T Q L +K + + D+ +++ +E
Sbjct: 1 MEEDIALLENKMTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEMLDE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
DS A L E +++L+K + +E+T LLS PYD+ A++ I G+GGT+AQ
Sbjct: 61 DDSIQAELEE----TLEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQ 111
>gi|389576793|ref|ZP_10166821.1| peptide chain release factor 2 [Eubacterium cellulosolvens 6]
gi|389312278|gb|EIM57211.1| peptide chain release factor 2 [Eubacterium cellulosolvens 6]
Length = 373
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 107/153 (69%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF +VMP L ++ +D+++ +ED+ + R+ G GGQ++NK +A+RITH+PTG+ V
Sbjct: 215 QTSFVSCDVMPELNDD-IDIEVRDEDIRVDTYRSSGAGGQHINKTSSAIRITHLPTGIVV 273
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ NK KA+ LKAKL ++ +E++A + IRG+ WG QIR+YV PY
Sbjct: 274 TCQNERSQFQNKDKAMQVLKAKLYMLEQEKQAEKAAGIRGEVTDIAWGHQIRSYVLQPYT 333
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD+RT E + +V+DG+L+PFI +YLK++
Sbjct: 334 MVKDLRTNAEKAQASAVLDGDLDPFINAYLKWQ 366
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 2/138 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
N++ ++ + E+R S L E+ + ELE K + FW+N EAQ+ + L D+K+
Sbjct: 7 NMKAELRTYDQPLVEVRDSLDLASKEQRIEELERKMEEPDFWNNPDEAQKQTKELGDLKN 66
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
+ + +D ++++ EE D D ++ E ++ + + LD + LLS Y
Sbjct: 67 DRDTYAKLVSTKEDIEMMIEMGEEED--DESIVPEVREMLDDFIETLDGVRIKTLLSEEY 124
Query: 126 DKEGAVISITAGAGGTDA 143
D A+I + AGAGGT+A
Sbjct: 125 DVNNAIIRLNAGAGGTEA 142
>gi|392938875|ref|ZP_10304519.1| peptide chain release factor 2 [Thermoanaerobacter siderophilus
SR4]
gi|392290625|gb|EIV99068.1| peptide chain release factor 2 [Thermoanaerobacter siderophilus
SR4]
Length = 368
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 120/188 (63%), Gaps = 9/188 (4%)
Query: 117 LTQLLSGPY-----DKEGAV---ISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEE 168
+T ++ GP+ E V + I+ TSF+ EV+P L E ++V+I E
Sbjct: 177 VTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEVLPEL-ENDIEVEIRPE 235
Query: 169 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 228
DL+I RA G GGQ VNK E+AVRITH+PTG+ V C ERSQ+ N+ A+ LKAKLL
Sbjct: 236 DLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLD 295
Query: 229 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 288
+ +++ +I+ ++G+ +A WG QIR+YVF PY LVKD RT +E ++ +VMDGE++ F
Sbjct: 296 LMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGF 355
Query: 289 IKSYLKYK 296
I +YLK K
Sbjct: 356 INAYLKQK 363
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 84/144 (58%), Gaps = 5/144 (3%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+QD+ + +V + ++E+ S ++ +++E+ E++ K +D +FW + ++QE +
Sbjct: 2 LQDY---KAEVSNMIEEIKEMGVSLDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQ 58
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+K+ + +K +D T+++L ++ D + +E KEL K L+ ++ L
Sbjct: 59 KALKELLEEYNSLVSKWEDLNTLIELG--LEEGDESITDEVDKEYKELKKKLEDLKIKTL 116
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
L+GPYDK A++SI AG+GGT+AQ
Sbjct: 117 LNGPYDKNNAILSIHAGSGGTEAQ 140
>gi|418963962|ref|ZP_13515793.1| peptide chain release factor 2 [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383342490|gb|EID20707.1| peptide chain release factor 2 [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 325
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L ++++++++ +ED+++ R+GG GGQNVNKV T VR+THIPTG+
Sbjct: 172 HTSFTSVEVMPEL-DDTIEIEVRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVT 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKLLQAKLYQMEQEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RTG E + + VMDG+++ FI +YLK++
Sbjct: 291 MVKDHRTGFEVAQVDKVMDGDIDGFIDAYLKWR 323
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 46 FWDNRAEAQETLQALTDVK---DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
FWD+ AQ+T Q L ++K D +TD D++ ++ E DS L E+ A
Sbjct: 6 FWDDNIAAQKTSQELNELKQTYDNFQQMTDL---FDESEILLDFLAEDDSVQEELEEKLA 62
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ ++ +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 63 ELETKMTS----YEMTLLLSEPYDNNNAILEIHPGSGGTEAQ 100
>gi|295109041|emb|CBL22994.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus
obeum A2-162]
Length = 334
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 107/152 (70%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF +VMP + ++ +DV+I ++D+ I R+ G GGQ++NK +A+RITH PTG+ V
Sbjct: 174 QTSFVSCDVMPDIKKD-LDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK KA+ LKAKL ++ +++ +++ IRG+ WG QIR+YV PY
Sbjct: 233 QCQNERSQHMNKDKAMQMLKAKLFLLKQQEAEAKLSGIRGEVTDIGWGNQIRSYVMQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
+VKD RT ET ++ +V+DGE++PFI +YLK+
Sbjct: 293 MVKDHRTSEETGNVDAVLDGEIDPFINAYLKW 324
>gi|392331070|ref|ZP_10275685.1| peptide chain release factor 2 [Streptococcus canis FSL Z3-227]
gi|391418749|gb|EIQ81561.1| peptide chain release factor 2 [Streptococcus canis FSL Z3-227]
Length = 327
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP L +++++V I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFVSVEVMPEL-DDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +E + + VMDG++E FI +YLK++ S
Sbjct: 291 MVKDHRTNYEVAQVDKVMDGDIEGFIDAYLKWRMS 325
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K + + D+ +++ EE DS L EA+ +
Sbjct: 6 FWNDNMAAQKTSQELNNLKSTYETFHNMQELSDETELYLEMLEEDDSVKDDL--EAS--L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
++L + L +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 EKLGQILTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|187777237|ref|ZP_02993710.1| hypothetical protein CLOSPO_00784 [Clostridium sporogenes ATCC
15579]
gi|187774165|gb|EDU37967.1| peptide chain release factor 2 [Clostridium sporogenes ATCC 15579]
Length = 325
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P L ++ +++I EDL+I RAGG GGQ+VNK E+AVRITHIPTG+ V
Sbjct: 173 QTSFASIEVLPELTDDQ-EIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIV 231
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK A+ LK++L+ + E +I+ + G+ WG QIR+YVFHPY
Sbjct: 232 QCQNERSQHTNKETAMKVLKSRLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYN 291
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RTG ETS++ +VM+G++ FI YLK
Sbjct: 292 LVKDHRTGAETSNVDAVMNGDINIFIIEYLK 322
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FW++ EAQ+ +KDK++ K ++D I+ L++ + D + +E
Sbjct: 3 NPNFWNDIKEAQKITSEEKYLKDKLSKYNHLKNTIED---IIGLSQMLSEEDDDMGKEIL 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S K + + +D+F++ LLSG YD+ A++++ +G GGTDAQ
Sbjct: 60 SEYKNIKEEIDRFKIETLLSGEYDRNNAIMTLHSGVGGTDAQ 101
>gi|345861348|ref|ZP_08813614.1| peptide chain release factor 2 [Desulfosporosinus sp. OT]
gi|344325613|gb|EGW37125.1| peptide chain release factor 2 [Desulfosporosinus sp. OT]
Length = 332
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 110/151 (72%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + E++ ++ I EDL + R+GG GGQ+VNK ++A+RITH+P+GV V
Sbjct: 178 HTSFASVDVIPEVTEDN-EITIDTEDLRVDTYRSGGAGGQHVNKTDSAIRITHLPSGVVV 236
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ+ NK A+ L+AKLL + +++ SEI +IRG+ + WG QIR+YVFHPY
Sbjct: 237 QCQSERSQIQNKAAAMRVLQAKLLELKRKEQESEISEIRGEQQEIAWGSQIRSYVFHPYS 296
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT ET ++ +VMDGE++ FI ++L+
Sbjct: 297 LVKDHRTNVETGNVSAVMDGEIDAFIAAFLQ 327
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
WD+ AQ+ +Q L ++K+ + + K+++ T+ L E D D L E +
Sbjct: 10 LWDDPDLAQKIMQELAYHQNKVKTYDELEGKLEETETLWLLAIEED--DLSLESEIEQEV 67
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ L + EL LLSG YD+ A++++ AGAGGT+AQ
Sbjct: 68 RSLRGRFEALELEILLSGQYDRNNAILTLHAGAGGTEAQ 106
>gi|315221796|ref|ZP_07863708.1| peptide chain release factor 2 [Streptococcus anginosus F0211]
gi|421489978|ref|ZP_15937353.1| peptide chain release factor 2 [Streptococcus anginosus SK1138]
gi|315189029|gb|EFU22732.1| peptide chain release factor 2 [Streptococcus anginosus F0211]
gi|400373991|gb|EJP26915.1| peptide chain release factor 2 [Streptococcus anginosus SK1138]
Length = 325
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L ++++++++ +ED+++ R+GG GGQNVNKV T VR+THIPTG+
Sbjct: 172 HTSFTSVEVMPEL-DDTIEIEVRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVT 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKLLQAKLYQMEQEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RTG E + + VMDG+++ FI +YLK++
Sbjct: 291 MVKDHRTGFEVAQVDKVMDGDIDGFIDAYLKWR 323
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K + D++ ++ E DS L E+ A +
Sbjct: 6 FWDDNIAAQKTSQELNELKQTYDNFQQMADLFDESEILLDFLAEDDSVQEELEEKLAELE 65
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
++ +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 66 TKMTS----YEMTLLLSEPYDNNNAILEIHPGSGGTEAQ 100
>gi|402833858|ref|ZP_10882467.1| peptide chain release factor 2 [Selenomonas sp. CM52]
gi|402279588|gb|EJU28372.1| peptide chain release factor 2 [Selenomonas sp. CM52]
Length = 371
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS ++MP + +++++V I D+ + RA G GGQ++NK +AVR+TH+PTG+ V
Sbjct: 215 HTSFSACDIMPEI-DDAVEVAINMADVRVDTYRASGAGGQHINKTSSAVRMTHMPTGIVV 273
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL N+ + + L+AKL + +E++ +EI+++ GD K EWG QIR+YVF PY
Sbjct: 274 QCQNERSQLQNREQCMKMLRAKLFELEQEKKEAEIQKLEGDQQKIEWGSQIRSYVFQPYT 333
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD+RTG ET ++ +VMDG+L+ FI+++L K
Sbjct: 334 MVKDMRTGMETGNVQAVMDGDLDAFIEAFLAAK 366
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 69/114 (60%), Gaps = 2/114 (1%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
E+++AELE K + +FWDN EAQ+ Q L +K ++ + +K DDA ++++ +
Sbjct: 32 EEKIAELEYKMGEPTFWDNAEEAQKINQELAAIKGSVDKYKEIVSKTDDAQALLEMA--L 89
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ D L E + + + A+ + EL LLSGPYD A++++ AGAGGT+AQ
Sbjct: 90 EENDTSLEPEVQAEFETIKTAVRELELEVLLSGPYDANNAILTLHAGAGGTEAQ 143
>gi|422758592|ref|ZP_16812354.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322411427|gb|EFY02335.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 327
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP L +++++V I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFVSVEVMPEL-DDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +E + + VMDG++E FI +YLK++ S
Sbjct: 291 MVKDHRTNYEVAQVDKVMDGDIEGFIDAYLKWRMS 325
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+S FW++ AQ+T Q L ++K + + D+ +++ EE DS L EA+
Sbjct: 3 ESDFWNDNIAAQKTSQKLNELKSTYETFHNMQELSDETELYLEMLEEDDSVKDDL--EAS 60
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
++ L + L +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 --LETLGQILASYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|379795225|ref|YP_005325223.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356872215|emb|CCE58554.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MSHR1132]
Length = 369
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 175/359 (48%), Gaps = 72/359 (20%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQ------------ 54
++++++ + + +IR S L+ E + E E ++ +FWDN+ +AQ
Sbjct: 6 IKRNIDKYNQDLTQIRGSLDLENKETNIQEYEEMMSEPNFWDNQTKAQDIIDKNNALKSI 65
Query: 55 ------------------ETLQALTDVKDKINL---LTDFKTKMDDAVTIVKLTEEMDST 93
E LQ D + K++L + DFK K+D+ + L D+
Sbjct: 66 VNGYKKLQQDVDDMEATWELLQEEFDEEMKVDLEQDVIDFKAKVDEYELQLLLDGPHDAN 125
Query: 94 DAGL-LEEAASIIKELNKALDQFELTQLLSG------------PYDKEGAVISITAGAGG 140
+A L L A + + A F + Q P D E + S+T G
Sbjct: 126 NAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGD-EAGIKSVTLLIKG 184
Query: 141 TDA-------------------------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFS 175
+A TSF+ +V+P + ++++I +D+ +
Sbjct: 185 HNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTF 244
Query: 176 RAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRA 235
RA G GGQ++NK E+A+RITH P+G+ V ERSQ+ N+ A+ LK+KL + E++A
Sbjct: 245 RASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQA 304
Query: 236 SEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
E+ +IRG+ + WG QIR+YVFHPY +VKD RT ET + +VMDGE+ PFI+SYL+
Sbjct: 305 REMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGEIGPFIESYLR 363
>gi|385260629|ref|ZP_10038772.1| peptide chain release factor 2 [Streptococcus sp. SK140]
gi|385190872|gb|EIF38300.1| peptide chain release factor 2 [Streptococcus sp. SK140]
Length = 329
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 176 HTSFTSVEVMPEL-DDTIEVDIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 235 ASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDALKGDKKEITWGSQIRSYVFTPYT 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 295 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + DDA ++ E +S
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDDAEILLDFLAEDESVKDE 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L+E+ A EL++ + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 LVEKLA----ELDQMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 104
>gi|312901832|ref|ZP_07761097.1| peptide chain release factor 2 [Enterococcus faecalis TX0470]
gi|311291025|gb|EFQ69581.1| peptide chain release factor 2 [Enterococcus faecalis TX0470]
Length = 327
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++++++ I +DL+I RA G GGQ++NK E+AVRITHIPTG V
Sbjct: 174 HTSFCSVDVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+S LKAKL + E++A E +RG+ ++ WG QIR+YVFHPY
Sbjct: 233 ASQVQRSQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +ET ++ +VMDG+L+ FI +YLK + S
Sbjct: 293 MVKDHRTNYETGNVQAVMDGDLDGFIDAYLKQRLS 327
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+ FWDN AQ+ + +K+K ++D+ + +L +E DA + EE
Sbjct: 2 GEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQE--EYDAEIQEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
I L + L +EL+ LL+ PYD A+I + GAGGT++Q
Sbjct: 60 EERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQ 102
>gi|389856214|ref|YP_006358457.1| peptide chain release factor 2 [Streptococcus suis ST1]
gi|353739932|gb|AER20939.1| peptide chain release factor 2 [Streptococcus suis ST1]
Length = 325
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 114/155 (73%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++++I ++++++ R+GG GGQNVNKV T VR+THIPTG+
Sbjct: 172 HTSFTSVEVMPEL-DDTIEIEIRDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVT 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKLLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RTG+E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTGYEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ D++ ++ E +S L+E+ A
Sbjct: 6 FWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDFLAEDESVRDELVEKLA--- 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 63 -KLDKTMTAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|401684570|ref|ZP_10816446.1| peptide chain release factor 2 [Streptococcus sp. BS35b]
gi|400184840|gb|EJO19076.1| peptide chain release factor 2 [Streptococcus sp. BS35b]
Length = 329
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V
Sbjct: 176 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 235 QSTVDRTQYGNRDRAMKMLQAKLYQMEQERKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E S + VMDG+L+ FI +YLK++ S
Sbjct: 295 MVKDHRTSFEVSQVDKVMDGDLDGFIDAYLKWRIS 329
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E +S
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDE 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L+E+ + EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 LVEQ----LTELDKMMTNYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 104
>gi|257416283|ref|ZP_05593277.1| peptide chain release factor 2 [Enterococcus faecalis ARO1/DG]
gi|424761121|ref|ZP_18188703.1| peptide chain release factor 2 [Enterococcus faecalis R508]
gi|257158111|gb|EEU88071.1| peptide chain release factor 2 [Enterococcus faecalis ARO1/DG]
gi|402402590|gb|EJV35298.1| peptide chain release factor 2 [Enterococcus faecalis R508]
Length = 327
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++++++ I +DL+I RA G GGQ++NK E+AVRITHIPTG V
Sbjct: 174 HTSFCSVDVMPEL-DDTIEIAINLDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+S LKAKL + E++A E +RG+ ++ WG QIR+YVFHPY
Sbjct: 233 ASQAQRSQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +ET ++ +VMDG+L+ FI +YLK + S
Sbjct: 293 MVKDHRTNYETGNVQAVMDGDLDGFIDAYLKQRLS 327
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+ FWDN AQ+ + +K+K ++D+ + +L +E DA + EE
Sbjct: 2 GEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQE--EYDAEIQEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
I L + L +EL+ LL+ PYD A+I + GAGGT++Q
Sbjct: 60 EERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQ 102
>gi|386585702|ref|YP_006082104.1| peptide chain release factor 2 [Streptococcus suis D12]
gi|353737848|gb|AER18856.1| peptide chain release factor 2 [Streptococcus suis D12]
Length = 325
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 114/155 (73%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++++I ++++++ R+GG GGQNVNKV T VR+THIPTG+
Sbjct: 172 HTSFTSVEVMPEL-DDTIEIEIRDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVT 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKLLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RTG+E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTGYEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ D++ ++ E +S L+E+ A
Sbjct: 6 FWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDFLAEDESVRDELVEKLA--- 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 63 -ELDKTMTAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|414158170|ref|ZP_11414464.1| peptide chain release factor 2 [Streptococcus sp. F0441]
gi|410870715|gb|EKS18672.1| peptide chain release factor 2 [Streptococcus sp. F0441]
Length = 325
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E S + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTSFEVSQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E +S L+E+ +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDELVEQ----L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 TELDKMMTNYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|323486370|ref|ZP_08091695.1| hypothetical protein HMPREF9474_03446 [Clostridium symbiosum
WAL-14163]
gi|323695006|ref|ZP_08109153.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673]
gi|355624996|ref|ZP_09047980.1| peptide chain release factor 2 [Clostridium sp. 7_3_54FAA]
gi|323400352|gb|EGA92725.1| hypothetical protein HMPREF9474_03446 [Clostridium symbiosum
WAL-14163]
gi|323500950|gb|EGB16865.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673]
gi|354821641|gb|EHF06026.1| peptide chain release factor 2 [Clostridium sp. 7_3_54FAA]
Length = 335
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 110/165 (66%), Gaps = 1/165 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ QTSF +VMP + EE +D+++ ++DL I R+ G GGQ++NK +
Sbjct: 161 LVRISPFNAAGKRQTSFVSCDVMPDI-EEDLDIEVNQDDLRIDTYRSSGAGGQHINKTSS 219
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
A+RITHIPTG+ V+C ERSQ NK KA+ LKAKL ++ +++ A ++ IRGD +
Sbjct: 220 AIRITHIPTGIVVQCQNERSQFQNKDKAMQMLKAKLYLLKQQENAEKLSDIRGDVKDINF 279
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
G QIR+YV PY LVKD RT E ++ +VMDG+++ FI +YLK+
Sbjct: 280 GNQIRSYVMQPYTLVKDHRTNAENGNVNAVMDGDIDLFISAYLKW 324
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ + +T++ ++KD + + + +D ++++ E D ++ E ++
Sbjct: 6 FWDDPERSTKTVREAKNLKDTVETYRHLEQQYEDIQIMIEMGYE--ENDPSMIPEIQEML 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
E +L+ LLSG YD A++ + AGAGGT+A
Sbjct: 64 DEFINSLEDIRTKTLLSGEYDNCNAILKLNAGAGGTEA 101
>gi|418193392|ref|ZP_12829885.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47439]
gi|353860115|gb|EHE40062.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47439]
Length = 325
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E D + +E + +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DESVHDELVAQL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +++T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 AELDKIMTSYDMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|421487867|ref|ZP_15935265.1| peptide chain release factor 2 [Streptococcus oralis SK304]
gi|400369829|gb|EJP22826.1| peptide chain release factor 2 [Streptococcus oralis SK304]
Length = 329
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V
Sbjct: 176 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 235 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E S + VMDG+L+ FI +YLK++ S
Sbjct: 295 MVKDHRTSFEVSQVDKVMDGDLDGFIDAYLKWRIS 329
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E +S
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDE 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L+E+ + EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 LVEQ----LTELDKMMANYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 104
>gi|379705646|ref|YP_005204105.1| peptide chain release factor 2 [Streptococcus infantarius subsp.
infantarius CJ18]
gi|374682345|gb|AEZ62634.1| peptide chain release factor 2 [Streptococcus infantarius subsp.
infantarius CJ18]
Length = 336
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 183 HTSFSSVEVMPEL-DDTVEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 241
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 242 ASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDILKGDKKEITWGSQIRSYVFTPYT 301
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RTG+E + + VMDG+++ FI ++LK++
Sbjct: 302 MVKDHRTGYEVAQVDKVMDGDIDGFIDAFLKWR 334
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 4/115 (3%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE K + FW++ AQ+T Q L +K + + D+ +++ +E
Sbjct: 1 MEEDIALLENKMTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEMLDE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
DS A L E +++L+K + +E+T LLS PYD+ A++ I G+GGT+AQ
Sbjct: 61 DDSIQAELEE----TLEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQ 111
>gi|335031680|ref|ZP_08525105.1| peptide chain release factor 2 [Streptococcus anginosus SK52 = DSM
20563]
gi|333768959|gb|EGL46114.1| peptide chain release factor 2 [Streptococcus anginosus SK52 = DSM
20563]
Length = 325
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L ++++++++ +ED+++ R+GG GGQNVNKV T VR+THIPTG+
Sbjct: 172 HTSFTSVEVMPEL-DDTIEIEVRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVT 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKLLQAKLYQMEQEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RTG E + + VMDG+++ FI +YLK++
Sbjct: 291 MVKDHRTGFEVAQVDKVMDGDIDGFIDAYLKWR 323
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 46 FWDNRAEAQETLQALTDVK---DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
FWD+ AQ+T Q L ++K D +TD D++ ++ E DS L E+ A
Sbjct: 6 FWDDNIAAQKTSQELNELKQTYDNFQQMTDL---FDESEILLDFLAEDDSVQEELEEKLA 62
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ ++ +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 63 ELETKMTS----YEMTLLLSEPYDNNNAILEIHPGSGGTEAQ 100
>gi|290890028|ref|ZP_06553113.1| hypothetical protein AWRIB429_0503 [Oenococcus oeni AWRIB429]
gi|419758654|ref|ZP_14284969.1| peptide chain release factor 2 [Oenococcus oeni AWRIB304]
gi|419856987|ref|ZP_14379701.1| peptide chain release factor 2 [Oenococcus oeni AWRIB202]
gi|419858595|ref|ZP_14381266.1| peptide chain release factor 2 [Oenococcus oeni DSM 20252 =
AWRIB129]
gi|421184410|ref|ZP_15641833.1| peptide chain release factor 2 [Oenococcus oeni AWRIB318]
gi|421188683|ref|ZP_15646019.1| peptide chain release factor 2 [Oenococcus oeni AWRIB419]
gi|421190620|ref|ZP_15647916.1| peptide chain release factor 2 [Oenococcus oeni AWRIB422]
gi|421191411|ref|ZP_15648688.1| peptide chain release factor 2 [Oenococcus oeni AWRIB548]
gi|421193945|ref|ZP_15651185.1| peptide chain release factor 2 [Oenococcus oeni AWRIB553]
gi|421194206|ref|ZP_15651428.1| peptide chain release factor 2 [Oenococcus oeni AWRIB568]
gi|421197136|ref|ZP_15654316.1| peptide chain release factor 2 [Oenococcus oeni AWRIB576]
gi|290480375|gb|EFD89014.1| hypothetical protein AWRIB429_0503 [Oenococcus oeni AWRIB429]
gi|399904682|gb|EJN92135.1| peptide chain release factor 2 [Oenococcus oeni AWRIB304]
gi|399964856|gb|EJN99490.1| peptide chain release factor 2 [Oenococcus oeni AWRIB419]
gi|399967124|gb|EJO01607.1| peptide chain release factor 2 [Oenococcus oeni AWRIB318]
gi|399969390|gb|EJO03730.1| peptide chain release factor 2 [Oenococcus oeni AWRIB422]
gi|399970411|gb|EJO04704.1| peptide chain release factor 2 [Oenococcus oeni AWRIB553]
gi|399972234|gb|EJO06448.1| peptide chain release factor 2 [Oenococcus oeni AWRIB548]
gi|399975650|gb|EJO09686.1| peptide chain release factor 2 [Oenococcus oeni AWRIB576]
gi|399978218|gb|EJO12174.1| peptide chain release factor 2 [Oenococcus oeni AWRIB568]
gi|410498543|gb|EKP89993.1| peptide chain release factor 2 [Oenococcus oeni DSM 20252 =
AWRIB129]
gi|410498646|gb|EKP90094.1| peptide chain release factor 2 [Oenococcus oeni AWRIB202]
Length = 372
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 107/155 (69%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++ ++++I +D+++ R+GG GGQNVNKV TAVR+THIPTG+ V
Sbjct: 213 HTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQNVNKVSTAVRLTHIPTGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ER+Q N+ A+ LKAKL E++R E ++ G + WG QIR+YVF PY+
Sbjct: 273 ASQVERTQYGNRDIAMKMLKAKLYEREEQKREEEHAKLSGTKLDVAWGSQIRSYVFQPYR 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD+R+G+ET D VMDG L+PFI +YLK+K S
Sbjct: 333 MVKDLRSGYETGDTDGVMDGNLDPFINAYLKWKLS 367
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
Query: 8 RKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI 67
R + ++++ R++ L L+ +AE E K + FWD++ AQ+ + +K++
Sbjct: 7 RNSISDMQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRR 66
Query: 68 NLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDK 127
+ + ++D + +L E D DA + E + I++ K L+++ L QLL+ YD
Sbjct: 67 DSFLSLQKSVEDLTAMAELLSEED--DADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDS 124
Query: 128 EGAVISITAGAGGTDA 143
A++ I G GGT++
Sbjct: 125 NNAILEIHPGEGGTES 140
>gi|116490620|ref|YP_810164.1| peptide chain release factor 2 [Oenococcus oeni PSU-1]
gi|122277196|sp|Q04GC3.1|RF2_OENOB RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|116091345|gb|ABJ56499.1| bacterial peptide chain release factor 2 (bRF-2) [Oenococcus oeni
PSU-1]
Length = 372
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 107/155 (69%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++ ++++I +D+++ R+GG GGQNVNKV TAVR+THIPTG+ V
Sbjct: 213 HTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQNVNKVSTAVRLTHIPTGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ER+Q N+ A+ LKAKL E++R E ++ G + WG QIR+YVF PY+
Sbjct: 273 ASQVERTQYGNRDIAMKMLKAKLYEQEEQKREEEHAKLSGTKLDVAWGSQIRSYVFQPYR 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD+R+G+ET D VMDG L+PFI +YLK+K S
Sbjct: 333 MVKDLRSGYETGDTDGVMDGNLDPFINAYLKWKLS 367
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
Query: 8 RKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI 67
R + ++++ R++ L L+ +AE E K + FWD++ AQ+ + +K++
Sbjct: 7 RNSISDMQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRR 66
Query: 68 NLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDK 127
+ + ++D + +L E D DA + E + I++ K L+++ L QLL+ YD
Sbjct: 67 DSFLSLQKSVEDLTAMAELLSEED--DADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDS 124
Query: 128 EGAVISITAGAGGTDA 143
A++ I G GGT++
Sbjct: 125 NNAILEIHPGEGGTES 140
>gi|328794147|ref|XP_003252002.1| PREDICTED: peptide chain release factor 2-like, partial [Apis
mellifera]
Length = 276
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 106/152 (69%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P + ++S+ V I +DL I R+ G GGQ++NK +AVRITH+PTG
Sbjct: 118 HTSFASVEVIPEI-DDSIKVDINPKDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGFVT 176
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ A++ L+AKL + EE++ + ++GD + WG QIR+YVFHPY
Sbjct: 177 TSQAQRSQLQNRETAMNELRAKLFHLEEEKKRQHKQALKGDQKEIGWGSQIRSYVFHPYN 236
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
LVKD+RTG+ETSD VMDG+L+PF+ SYL++
Sbjct: 237 LVKDLRTGYETSDTSGVMDGKLQPFVYSYLQW 268
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+E + +++L +EL LLSG YD A+I I GAGGT+A
Sbjct: 1 DEVETDLQKLQSEFHNYELDLLLSGKYDSHNALIEIHPGAGGTEA 45
>gi|417849938|ref|ZP_12495853.1| peptide chain release factor 2 [Streptococcus mitis SK1080]
gi|339455271|gb|EGP67878.1| peptide chain release factor 2 [Streptococcus mitis SK1080]
Length = 329
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 176 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 235 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 295 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E D
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DES 56
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ EE + + EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 57 VQEELVAQLAELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 104
>gi|223932890|ref|ZP_03624886.1| peptide chain release factor 2 [Streptococcus suis 89/1591]
gi|330832393|ref|YP_004401218.1| peptide chain release factor 2 [Streptococcus suis ST3]
gi|386583654|ref|YP_006080057.1| peptide chain release factor 2 [Streptococcus suis D9]
gi|223898471|gb|EEF64836.1| peptide chain release factor 2 [Streptococcus suis 89/1591]
gi|329306616|gb|AEB81032.1| peptide chain release factor 2 [Streptococcus suis ST3]
gi|353735800|gb|AER16809.1| peptide chain release factor 2 [Streptococcus suis D9]
Length = 325
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 114/155 (73%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++++I ++++++ R+GG GGQNVNKV T VR+THIPTG+
Sbjct: 172 HTSFTSVEVMPEL-DDTIEIEIRDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVT 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKLLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RTG+E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTGYEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ D++ ++ E +S L+E+ +
Sbjct: 6 FWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDFLAEDESVRDELVEK----L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 VELDKTMTAYEMTLLLSDPYDHNNAILEIHPGSGGTEAQ 100
>gi|418102471|ref|ZP_12739547.1| peptide chain release factor 2 [Streptococcus pneumoniae NP070]
gi|419475148|ref|ZP_14014989.1| peptide chain release factor 2 [Streptococcus pneumoniae GA14688]
gi|419486258|ref|ZP_14026025.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44128]
gi|353776637|gb|EHD57112.1| peptide chain release factor 2 [Streptococcus pneumoniae NP070]
gi|379561486|gb|EHZ26503.1| peptide chain release factor 2 [Streptococcus pneumoniae GA14688]
gi|379589167|gb|EHZ54007.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44128]
Length = 325
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E +S L+E+ A
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVQEELVEQLA--- 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 63 -ELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|306825598|ref|ZP_07458937.1| peptide chain release factor RF2 [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304431959|gb|EFM34936.1| peptide chain release factor RF2 [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 329
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V
Sbjct: 176 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 235 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E S + VMDG+L+ FI +YLK++ S
Sbjct: 295 MVKDHRTSFEVSQVDKVMDGDLDGFIDAYLKWRIS 329
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E +S
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDE 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L+E+ + EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 LVEQ----LTELDKMMANYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 104
>gi|297562654|ref|YP_003681628.1| peptide chain release factor 2 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847102|gb|ADH69122.1| peptide chain release factor 2 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 372
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 109/155 (70%), Gaps = 2/155 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G +V+P++ E+S ++I + DL + R+ G GGQ VN ++AVRITH+PTG+ V
Sbjct: 213 QTSFAGVDVVPVV-EQSDHIEIDDGDLRVDVYRSSGPGGQGVNTTDSAVRITHLPTGIVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQL NK A+S L+AKLL E+ + + +IRGD+V + WG Q+RNYV HPY+
Sbjct: 272 SCQNERSQLQNKATAMSMLQAKLLARKREEEQAALDEIRGDSVSS-WGTQMRNYVLHPYQ 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
VKDVRTG ET + V+DG+++ FI + +++ S
Sbjct: 331 SVKDVRTGAETGNTSGVLDGDIDEFIDAEIRWMRS 365
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L+ + ++AEL ++AD W ++ AQ+ + L+ ++ +N + ++DD + +L
Sbjct: 26 LEAMHTQIAELREQSADPELWADQDNAQKVTRQLSSLESMVNKINGIGQRLDDLGVLYEL 85
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
E D D + EA + +L K + + E+ LL+GP+D+ A+++I + AGG DA
Sbjct: 86 AEAEDDADTRV--EADRELDQLRKEIGELEVRTLLNGPHDEREAIVTINSQAGGVDA 140
>gi|429317614|emb|CCP37402.1| peptide chain release factor 2 [Streptococcus pneumoniae SPN034156]
gi|429318507|emb|CBW32341.2| peptide chain release factor 2 [Streptococcus pneumoniae OXC141]
gi|429319156|emb|CCP32395.1| peptide chain release factor 2 [Streptococcus pneumoniae SPN034183]
gi|429320971|emb|CCP34369.1| peptide chain release factor 2 [Streptococcus pneumoniae SPN994039]
gi|429322791|emb|CCP30410.1| peptide chain release factor 2 [Streptococcus pneumoniae SPN994038]
Length = 364
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 211 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 269
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 270 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 329
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 330 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 364
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 77/138 (55%), Gaps = 4/138 (2%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+ ++A +++ R S L+ LE+E+A LE K + FW++ AQ+T Q L ++K+
Sbjct: 6 IRQKIDANREKLASFRGSLDLEGLEEEIAILENKMTEPDFWNDNIAAQKTSQELNELKNT 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
N + D+ ++ E D + +E + + EL+K + +E+T LLS PYD
Sbjct: 66 YNTFHKMEELQDEVEILLDFLAE----DESVHDELVAQLAELDKIMTSYEMTLLLSEPYD 121
Query: 127 KEGAVISITAGAGGTDAQ 144
A++ I G+GGT+AQ
Sbjct: 122 HNNAILEIHPGSGGTEAQ 139
>gi|418968754|ref|ZP_13520157.1| peptide chain release factor 2 [Streptococcus pseudopneumoniae ATCC
BAA-960]
gi|383352544|gb|EID30236.1| peptide chain release factor 2 [Streptococcus pseudopneumoniae ATCC
BAA-960]
Length = 329
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 176 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 235 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 295 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E +S
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVQEE 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L+E+ A EL+K + +E+T LLS YD A++ I G+GGT+AQ
Sbjct: 61 LVEQLA----ELDKMMTSYEMTLLLSELYDHNNAILEIHPGSGGTEAQ 104
>gi|342163427|ref|YP_004768066.1| peptide chain release factor 2 [Streptococcus pseudopneumoniae
IS7493]
gi|341933309|gb|AEL10206.1| peptide chain release factor 2 [Streptococcus pseudopneumoniae
IS7493]
Length = 325
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E D + EE + +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DESVQEELVTQL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 SELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|307705242|ref|ZP_07642109.1| peptide chain release factor 2 [Streptococcus mitis SK597]
gi|307621191|gb|EFO00261.1| peptide chain release factor 2 [Streptococcus mitis SK597]
Length = 325
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E +S L+E+ +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFQKMEELQDEVEILLDFLAEDESVHEELVEQ----L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 SELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|167039139|ref|YP_001662124.1| peptide chain release factor 2 [Thermoanaerobacter sp. X514]
gi|166853379|gb|ABY91788.1| peptide chain release factor 2 [Thermoanaerobacter sp. X514]
Length = 330
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 108/153 (70%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P L E ++V+I EDL+I RA G GGQ VNK E+AVRITH+PTG+ V
Sbjct: 174 HTSFALVEVLPEL-ENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKLL + +++ +I+ ++G+ +A WG QIR+YVF PY
Sbjct: 233 SCQSERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RT +E ++ +VMDGE++ FI +YLK K
Sbjct: 293 LVKDHRTNYEVGNVQAVMDGEIDGFINAYLKQK 325
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+D +FW + ++QE + +K+ + +K +D T+++L ++ D + +E
Sbjct: 2 SDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLSTLIELG--LEEGDESITDEV 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
KEL K L+ ++ LL+G YDK A++SI AG+GGT+AQ
Sbjct: 60 DKEYKELKKKLEDLKIKTLLNGLYDKNNAILSIHAGSGGTEAQ 102
>gi|345016985|ref|YP_004819338.1| peptide chain release factor 2 [Thermoanaerobacter wiegelii Rt8.B1]
gi|344032328|gb|AEM78054.1| peptide chain release factor 2 [Thermoanaerobacter wiegelii Rt8.B1]
Length = 368
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 120/188 (63%), Gaps = 9/188 (4%)
Query: 117 LTQLLSGPY-----DKEGAV---ISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEE 168
+T ++ GP+ E V + I+ TSF+ EV+P L E ++V+I E
Sbjct: 177 VTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEVLPEL-ENDIEVEIRPE 235
Query: 169 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 228
DL+I RA G GGQ VNK E+AVRITH+PTG+ V C ERSQ+ N+ A+ LKAKLL
Sbjct: 236 DLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLD 295
Query: 229 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 288
+ +++ +I+ ++G+ +A WG QIR+YVF PY LVKD RT +E ++ +VMDGE++ F
Sbjct: 296 LMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTNYEEGNVNAVMDGEIDGF 355
Query: 289 IKSYLKYK 296
I +YLK K
Sbjct: 356 INAYLKQK 363
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 84/144 (58%), Gaps = 5/144 (3%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+QD+ + +V + ++E+ S ++ +++E+ E++ K +D +FW + ++QE +
Sbjct: 2 LQDY---KAEVSNMIEEIKEMGVSLDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQ 58
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+K+ + +K +D T+++L ++ D + +E KEL K L+ ++ L
Sbjct: 59 KALKELLEEYNSLVSKWEDLNTLIELG--LEEGDESITDEVDKEYKELKKKLEDLKIKTL 116
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
L+GPYDK A++SI AG+GGT+AQ
Sbjct: 117 LNGPYDKNNAILSIHAGSGGTEAQ 140
>gi|417793933|ref|ZP_12441199.1| peptide chain release factor 2 [Streptococcus oralis SK255]
gi|334271653|gb|EGL90038.1| peptide chain release factor 2 [Streptococcus oralis SK255]
Length = 329
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V
Sbjct: 176 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 235 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E S + VMDG+L+ FI +YLK++ S
Sbjct: 295 MVKDHRTSFEVSQVDKVMDGDLDGFIDAYLKWRIS 329
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E +S
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDE 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L+E+ + EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 LVEQ----LTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 104
>gi|386316650|ref|YP_006012814.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|410494413|ref|YP_006904259.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|323126937|gb|ADX24234.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|410439573|emb|CCI62201.1| Peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 327
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP L +++++V I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFVSVEVMPEL-DDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAIKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +E + + VMDG++E FI +YLK++ S
Sbjct: 291 MVKDHRTNYEVAQVDKVMDGDIEGFIDAYLKWRMS 325
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+ Q L ++K + + D+ +++ EE DS L EA+ +
Sbjct: 6 FWNDNIAAQKISQKLNELKSTYETFHNMQELSDETELYLEMLEEDDSVKDDL--EAS--L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ L + L +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 ETLGQILASYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|307708908|ref|ZP_07645368.1| peptide chain release factor 2 [Streptococcus mitis SK564]
gi|307620244|gb|EFN99360.1| peptide chain release factor 2 [Streptococcus mitis SK564]
Length = 325
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E D + EE + +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DESVQEELVAQL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 AELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|169832431|ref|YP_001694217.1| peptide chain release factor 2 [Streptococcus pneumoniae
Hungary19A-6]
gi|172079637|ref|ZP_02709786.2| peptide chain release factor 2 [Streptococcus pneumoniae
CDC1873-00]
gi|183603431|ref|ZP_02717047.2| peptide chain release factor 2 [Streptococcus pneumoniae
CDC3059-06]
gi|183603478|ref|ZP_02714985.2| peptide chain release factor 2 [Streptococcus pneumoniae
CDC0288-04]
gi|225854263|ref|YP_002735775.1| peptide chain release factor 2 [Streptococcus pneumoniae JJA]
gi|237650402|ref|ZP_04524654.1| peptide chain release factor 2 [Streptococcus pneumoniae CCRI 1974]
gi|237822484|ref|ZP_04598329.1| peptide chain release factor 2 [Streptococcus pneumoniae CCRI
1974M2]
gi|303260019|ref|ZP_07345993.1| peptide chain release factor 2 [Streptococcus pneumoniae SP-BS293]
gi|303261425|ref|ZP_07347373.1| peptide chain release factor 2 [Streptococcus pneumoniae
SP14-BS292]
gi|303264092|ref|ZP_07350013.1| peptide chain release factor 2 [Streptococcus pneumoniae BS397]
gi|303266295|ref|ZP_07352186.1| peptide chain release factor 2 [Streptococcus pneumoniae BS457]
gi|303269536|ref|ZP_07355300.1| peptide chain release factor 2 [Streptococcus pneumoniae BS458]
gi|307127694|ref|YP_003879725.1| peptide chain release factor 2 [Streptococcus pneumoniae 670-6B]
gi|168994933|gb|ACA35545.1| peptide chain release factor 2 [Streptococcus pneumoniae
Hungary19A-6]
gi|172041988|gb|EDT50034.1| peptide chain release factor 2 [Streptococcus pneumoniae
CDC1873-00]
gi|183574752|gb|EDT95280.1| peptide chain release factor 2 [Streptococcus pneumoniae
CDC0288-04]
gi|183576822|gb|EDT97350.1| peptide chain release factor 2 [Streptococcus pneumoniae
CDC3059-06]
gi|225722944|gb|ACO18797.1| peptide chain release factor 2 [Streptococcus pneumoniae JJA]
gi|302637559|gb|EFL68046.1| peptide chain release factor 2 [Streptococcus pneumoniae
SP14-BS292]
gi|302638938|gb|EFL69399.1| peptide chain release factor 2 [Streptococcus pneumoniae SP-BS293]
gi|302640921|gb|EFL71304.1| peptide chain release factor 2 [Streptococcus pneumoniae BS458]
gi|302644225|gb|EFL74481.1| peptide chain release factor 2 [Streptococcus pneumoniae BS457]
gi|302646497|gb|EFL76723.1| peptide chain release factor 2 [Streptococcus pneumoniae BS397]
gi|306484756|gb|ADM91625.1| peptide chain release factor 2 [Streptococcus pneumoniae 670-6B]
Length = 329
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 176 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 235 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 295 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E D
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DES 56
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +E + + EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 57 VHDELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 104
>gi|148985895|ref|ZP_01818989.1| peptide chain release factor 2 [Streptococcus pneumoniae SP3-BS71]
gi|148989834|ref|ZP_01821128.1| peptide chain release factor 2 [Streptococcus pneumoniae SP6-BS73]
gi|149007634|ref|ZP_01831251.1| peptide chain release factor 2 [Streptococcus pneumoniae SP18-BS74]
gi|149020396|ref|ZP_01835288.1| peptide chain release factor 2 [Streptococcus pneumoniae SP23-BS72]
gi|387757183|ref|YP_006064162.1| peptide chain release factor 2 [Streptococcus pneumoniae OXC141]
gi|405760923|ref|YP_006701519.1| peptide chain release factor 2 [Streptococcus pneumoniae SPNA45]
gi|417676506|ref|ZP_12325919.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17545]
gi|417695912|ref|ZP_12345092.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47368]
gi|418074094|ref|ZP_12711350.1| peptide chain release factor 2 [Streptococcus pneumoniae GA11184]
gi|418078245|ref|ZP_12715468.1| peptide chain release factor 2 [Streptococcus pneumoniae 4027-06]
gi|418080197|ref|ZP_12717412.1| peptide chain release factor 2 [Streptococcus pneumoniae 6735-05]
gi|418086493|ref|ZP_12723664.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47033]
gi|418089146|ref|ZP_12726304.1| peptide chain release factor 2 [Streptococcus pneumoniae GA43265]
gi|418091369|ref|ZP_12728514.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44452]
gi|418095857|ref|ZP_12732972.1| peptide chain release factor 2 [Streptococcus pneumoniae GA16531]
gi|418098120|ref|ZP_12735220.1| peptide chain release factor 2 [Streptococcus pneumoniae 6901-05]
gi|418107134|ref|ZP_12744174.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41410]
gi|418109716|ref|ZP_12746745.1| peptide chain release factor 2 [Streptococcus pneumoniae GA49447]
gi|418114240|ref|ZP_12751231.1| peptide chain release factor 2 [Streptococcus pneumoniae 5787-06]
gi|418116478|ref|ZP_12753452.1| peptide chain release factor 2 [Streptococcus pneumoniae 6963-05]
gi|418125360|ref|ZP_12762276.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44511]
gi|418132596|ref|ZP_12769469.1| peptide chain release factor 2 [Streptococcus pneumoniae GA11304]
gi|418134486|ref|ZP_12771344.1| peptide chain release factor 2 [Streptococcus pneumoniae GA11426]
gi|418139069|ref|ZP_12775900.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13338]
gi|418145976|ref|ZP_12782760.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13637]
gi|418154787|ref|ZP_12791518.1| peptide chain release factor 2 [Streptococcus pneumoniae GA16242]
gi|418159397|ref|ZP_12796099.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17227]
gi|418161791|ref|ZP_12798482.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17328]
gi|418168847|ref|ZP_12805493.1| peptide chain release factor 2 [Streptococcus pneumoniae GA19077]
gi|418173115|ref|ZP_12809729.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41277]
gi|418180111|ref|ZP_12816683.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41688]
gi|418182350|ref|ZP_12818911.1| peptide chain release factor 2 [Streptococcus pneumoniae GA43380]
gi|418191303|ref|ZP_12827807.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47388]
gi|418202031|ref|ZP_12838461.1| peptide chain release factor 2 [Streptococcus pneumoniae GA52306]
gi|418213925|ref|ZP_12840660.1| peptide chain release factor 2 [Streptococcus pneumoniae GA54644]
gi|418216203|ref|ZP_12842927.1| peptide chain release factor 2 [Streptococcus pneumoniae
Netherlands15B-37]
gi|418218494|ref|ZP_12845162.1| peptide chain release factor 2 [Streptococcus pneumoniae NP127]
gi|418220676|ref|ZP_12847332.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47751]
gi|418225179|ref|ZP_12851808.1| peptide chain release factor 2 [Streptococcus pneumoniae NP112]
gi|418231822|ref|ZP_12858410.1| peptide chain release factor 2 [Streptococcus pneumoniae GA07228]
gi|418236121|ref|ZP_12862690.1| peptide chain release factor 2 [Streptococcus pneumoniae GA19690]
gi|418238326|ref|ZP_12864882.1| peptide chain release factor 2 [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419422635|ref|ZP_13962854.1| peptide chain release factor 2 [Streptococcus pneumoniae GA43264]
gi|419431153|ref|ZP_13971299.1| peptide chain release factor 2 [Streptococcus pneumoniae EU-NP05]
gi|419433412|ref|ZP_13973531.1| peptide chain release factor 2 [Streptococcus pneumoniae GA40183]
gi|419439964|ref|ZP_13980018.1| peptide chain release factor 2 [Streptococcus pneumoniae GA40410]
gi|419455160|ref|ZP_13995120.1| peptide chain release factor 2 [Streptococcus pneumoniae EU-NP04]
gi|419457127|ref|ZP_13997073.1| peptide chain release factor 2 [Streptococcus pneumoniae GA02254]
gi|419459600|ref|ZP_13999536.1| peptide chain release factor 2 [Streptococcus pneumoniae GA02270]
gi|419461880|ref|ZP_14001796.1| peptide chain release factor 2 [Streptococcus pneumoniae GA02714]
gi|419464125|ref|ZP_14004018.1| peptide chain release factor 2 [Streptococcus pneumoniae GA04175]
gi|419466724|ref|ZP_14006607.1| peptide chain release factor 2 [Streptococcus pneumoniae GA05248]
gi|419468626|ref|ZP_14008497.1| peptide chain release factor 2 [Streptococcus pneumoniae GA06083]
gi|419479591|ref|ZP_14019399.1| peptide chain release factor 2 [Streptococcus pneumoniae GA19101]
gi|419484380|ref|ZP_14024156.1| peptide chain release factor 2 [Streptococcus pneumoniae GA43257]
gi|419488227|ref|ZP_14027980.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44386]
gi|419496935|ref|ZP_14036646.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47522]
gi|419499284|ref|ZP_14038983.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47597]
gi|419512151|ref|ZP_14051785.1| peptide chain release factor 2 [Streptococcus pneumoniae GA05578]
gi|419516435|ref|ZP_14056053.1| peptide chain release factor 2 [Streptococcus pneumoniae GA02506]
gi|419525498|ref|ZP_14065063.1| peptide chain release factor 2 [Streptococcus pneumoniae GA14373]
gi|419534195|ref|ZP_14073701.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17457]
gi|421240319|ref|ZP_15696867.1| peptide chain release factor 2 [Streptococcus pneumoniae 2080913]
gi|421272397|ref|ZP_15723244.1| peptide chain release factor 2 [Streptococcus pneumoniae SPAR55]
gi|421280736|ref|ZP_15731535.1| peptide chain release factor 2 [Streptococcus pneumoniae GA04672]
gi|421282942|ref|ZP_15733731.1| peptide chain release factor 2 [Streptococcus pneumoniae GA04216]
gi|421285414|ref|ZP_15736191.1| peptide chain release factor 2 [Streptococcus pneumoniae GA60190]
gi|421297360|ref|ZP_15748063.1| peptide chain release factor 2 [Streptococcus pneumoniae GA58581]
gi|421300608|ref|ZP_15751279.1| peptide chain release factor 2 [Streptococcus pneumoniae GA19998]
gi|421306939|ref|ZP_15757585.1| peptide chain release factor 2 [Streptococcus pneumoniae GA60132]
gi|421309183|ref|ZP_15759812.1| peptide chain release factor 2 [Streptococcus pneumoniae GA62681]
gi|147760789|gb|EDK67760.1| peptide chain release factor 2 [Streptococcus pneumoniae SP18-BS74]
gi|147922041|gb|EDK73165.1| peptide chain release factor 2 [Streptococcus pneumoniae SP3-BS71]
gi|147924776|gb|EDK75860.1| peptide chain release factor 2 [Streptococcus pneumoniae SP6-BS73]
gi|147930698|gb|EDK81680.1| peptide chain release factor 2 [Streptococcus pneumoniae SP23-BS72]
gi|332077171|gb|EGI87633.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17545]
gi|332203909|gb|EGJ17976.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47368]
gi|353747436|gb|EHD28092.1| peptide chain release factor 2 [Streptococcus pneumoniae 4027-06]
gi|353749594|gb|EHD30238.1| peptide chain release factor 2 [Streptococcus pneumoniae GA11184]
gi|353753808|gb|EHD34424.1| peptide chain release factor 2 [Streptococcus pneumoniae 6735-05]
gi|353759756|gb|EHD40339.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47033]
gi|353762833|gb|EHD43391.1| peptide chain release factor 2 [Streptococcus pneumoniae GA43265]
gi|353766742|gb|EHD47282.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44452]
gi|353770485|gb|EHD50998.1| peptide chain release factor 2 [Streptococcus pneumoniae 6901-05]
gi|353770844|gb|EHD51355.1| peptide chain release factor 2 [Streptococcus pneumoniae GA16531]
gi|353780611|gb|EHD61068.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41410]
gi|353785009|gb|EHD65429.1| peptide chain release factor 2 [Streptococcus pneumoniae GA49447]
gi|353787538|gb|EHD67940.1| peptide chain release factor 2 [Streptococcus pneumoniae 5787-06]
gi|353790316|gb|EHD70699.1| peptide chain release factor 2 [Streptococcus pneumoniae 6963-05]
gi|353799404|gb|EHD79723.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44511]
gi|353806552|gb|EHD86825.1| peptide chain release factor 2 [Streptococcus pneumoniae GA11304]
gi|353815544|gb|EHD95760.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13637]
gi|353823079|gb|EHE03254.1| peptide chain release factor 2 [Streptococcus pneumoniae GA16242]
gi|353824749|gb|EHE04917.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17227]
gi|353831381|gb|EHE11510.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17328]
gi|353836766|gb|EHE16854.1| peptide chain release factor 2 [Streptococcus pneumoniae GA19077]
gi|353839814|gb|EHE19888.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41277]
gi|353846077|gb|EHE26112.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41688]
gi|353850587|gb|EHE30591.1| peptide chain release factor 2 [Streptococcus pneumoniae GA43380]
gi|353857204|gb|EHE37167.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47388]
gi|353867834|gb|EHE47724.1| peptide chain release factor 2 [Streptococcus pneumoniae GA52306]
gi|353871208|gb|EHE51079.1| peptide chain release factor 2 [Streptococcus pneumoniae GA54644]
gi|353873254|gb|EHE53115.1| peptide chain release factor 2 [Streptococcus pneumoniae
Netherlands15B-37]
gi|353876691|gb|EHE56540.1| peptide chain release factor 2 [Streptococcus pneumoniae NP127]
gi|353877545|gb|EHE57388.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47751]
gi|353882487|gb|EHE62298.1| peptide chain release factor 2 [Streptococcus pneumoniae NP112]
gi|353888128|gb|EHE67904.1| peptide chain release factor 2 [Streptococcus pneumoniae GA07228]
gi|353894050|gb|EHE73795.1| peptide chain release factor 2 [Streptococcus pneumoniae GA19690]
gi|353894749|gb|EHE74490.1| peptide chain release factor 2 [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|353903076|gb|EHE78602.1| peptide chain release factor 2 [Streptococcus pneumoniae GA11426]
gi|353905906|gb|EHE81322.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13338]
gi|379532613|gb|EHY97838.1| peptide chain release factor 2 [Streptococcus pneumoniae GA02254]
gi|379534472|gb|EHY99684.1| peptide chain release factor 2 [Streptococcus pneumoniae GA02270]
gi|379534771|gb|EHY99981.1| peptide chain release factor 2 [Streptococcus pneumoniae GA02714]
gi|379539344|gb|EHZ04523.1| peptide chain release factor 2 [Streptococcus pneumoniae GA04175]
gi|379544847|gb|EHZ09991.1| peptide chain release factor 2 [Streptococcus pneumoniae GA05248]
gi|379546729|gb|EHZ11867.1| peptide chain release factor 2 [Streptococcus pneumoniae GA06083]
gi|379559889|gb|EHZ24916.1| peptide chain release factor 2 [Streptococcus pneumoniae GA14373]
gi|379567239|gb|EHZ32225.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17457]
gi|379573245|gb|EHZ38201.1| peptide chain release factor 2 [Streptococcus pneumoniae GA19101]
gi|379577542|gb|EHZ42461.1| peptide chain release factor 2 [Streptococcus pneumoniae GA40183]
gi|379580575|gb|EHZ45465.1| peptide chain release factor 2 [Streptococcus pneumoniae GA40410]
gi|379583891|gb|EHZ48768.1| peptide chain release factor 2 [Streptococcus pneumoniae GA43257]
gi|379589966|gb|EHZ54805.1| peptide chain release factor 2 [Streptococcus pneumoniae GA43264]
gi|379590342|gb|EHZ55180.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44386]
gi|379601449|gb|EHZ66222.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47522]
gi|379602338|gb|EHZ67109.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47597]
gi|379629617|gb|EHZ94211.1| peptide chain release factor 2 [Streptococcus pneumoniae EU-NP04]
gi|379632397|gb|EHZ96973.1| peptide chain release factor 2 [Streptococcus pneumoniae EU-NP05]
gi|379636621|gb|EIA01179.1| peptide chain release factor 2 [Streptococcus pneumoniae GA05578]
gi|379640438|gb|EIA04977.1| peptide chain release factor 2 [Streptococcus pneumoniae GA02506]
gi|395609256|gb|EJG69344.1| peptide chain release factor 2 [Streptococcus pneumoniae 2080913]
gi|395877956|gb|EJG89025.1| peptide chain release factor 2 [Streptococcus pneumoniae SPAR55]
gi|395882808|gb|EJG93852.1| peptide chain release factor 2 [Streptococcus pneumoniae GA04216]
gi|395884093|gb|EJG95135.1| peptide chain release factor 2 [Streptococcus pneumoniae GA04672]
gi|395887393|gb|EJG98408.1| peptide chain release factor 2 [Streptococcus pneumoniae GA60190]
gi|395892934|gb|EJH03924.1| peptide chain release factor 2 [Streptococcus pneumoniae GA58581]
gi|395900032|gb|EJH10971.1| peptide chain release factor 2 [Streptococcus pneumoniae GA19998]
gi|395908902|gb|EJH19779.1| peptide chain release factor 2 [Streptococcus pneumoniae GA60132]
gi|395911927|gb|EJH22791.1| peptide chain release factor 2 [Streptococcus pneumoniae GA62681]
gi|404277812|emb|CCM08367.1| peptide chain release factor 2 [Streptococcus pneumoniae SPNA45]
Length = 325
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E D + +E + +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DESVHDELVAQL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 AELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|326389631|ref|ZP_08211197.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus JW
200]
gi|325994346|gb|EGD52772.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus JW
200]
Length = 330
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 108/153 (70%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P L E ++V+I EDL+I RA G GGQ VNK E+AVRITH+PTG+ V
Sbjct: 174 HTSFALVEVLPEL-ENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKLL + +++ +I+ ++G+ +A WG QIR+YVF PY
Sbjct: 233 SCQSERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RT +E ++ +VMDGE++ FI +YLK K
Sbjct: 293 LVKDHRTNYEVGNVQAVMDGEIDGFINAYLKQK 325
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+D +FW + ++QE + +K+ + +K +D T+++L +D D + +E
Sbjct: 2 SDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLNTLIELG--LDEGDESITDEV 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
KEL K L+ ++ LL+GPYDK A++SI AG+GGT+AQ
Sbjct: 60 DKEYKELKKKLEDLKIKTLLNGPYDKNNAILSIHAGSGGTEAQ 102
>gi|307706955|ref|ZP_07643754.1| peptide chain release factor 2 [Streptococcus mitis SK321]
gi|307617669|gb|EFN96837.1| peptide chain release factor 2 [Streptococcus mitis SK321]
Length = 325
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E +S L+E+ +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHEELVEQ----L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 SELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|383938432|ref|ZP_09991643.1| peptide chain release factor 2 [Streptococcus pseudopneumoniae
SK674]
gi|383714641|gb|EID70636.1| peptide chain release factor 2 [Streptococcus pseudopneumoniae
SK674]
Length = 329
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 176 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 235 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 295 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E +S
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVQEE 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L+E+ A EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 LVEQLA----ELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 104
>gi|257090077|ref|ZP_05584438.1| peptide chain release factor [Enterococcus faecalis CH188]
gi|312903512|ref|ZP_07762692.1| peptide chain release factor 2 [Enterococcus faecalis TX0635]
gi|422689171|ref|ZP_16747283.1| peptide chain release factor 2 [Enterococcus faecalis TX0630]
gi|422731554|ref|ZP_16787912.1| peptide chain release factor 2 [Enterococcus faecalis TX0645]
gi|256998889|gb|EEU85409.1| peptide chain release factor [Enterococcus faecalis CH188]
gi|310633388|gb|EFQ16671.1| peptide chain release factor 2 [Enterococcus faecalis TX0635]
gi|315162421|gb|EFU06438.1| peptide chain release factor 2 [Enterococcus faecalis TX0645]
gi|315577792|gb|EFU89983.1| peptide chain release factor 2 [Enterococcus faecalis TX0630]
Length = 327
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 108/151 (71%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++++++ I +DL+I RA G GGQ++NK E+AVRITHIPTG V
Sbjct: 174 HTSFCSVDVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+S LKAKL + E++A E +RG+ ++ WG QIR+YVFHPY
Sbjct: 233 ASQAQRSQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT +ET ++ +VMDG+L+ FI +YLK
Sbjct: 293 MVKDHRTNYETGNVQAVMDGDLDGFIDAYLK 323
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+ FWDN AQ+ + +K+K ++D+ + +L +E DA + EE
Sbjct: 2 GEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQE--EYDAEIQEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
I L + L +EL+ LL+ PYD A+I + GAGGT++Q
Sbjct: 60 EERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQ 102
>gi|421895161|ref|ZP_16325636.1| peptide chain release factor 2 [Pediococcus pentosaceus IE-3]
gi|385271930|emb|CCG91008.1| peptide chain release factor 2 [Pediococcus pentosaceus IE-3]
Length = 332
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++S++V I ++DL + R+ G GGQ++NK +AVRITH+PTG+ V
Sbjct: 174 HTSFASVDVMPEL-DDSVEVNINQDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQL N+ A+S LKAKL + E+++A E +I G ++ WG QIR+YVFHPY
Sbjct: 233 ASQAERSQLQNRATAMSMLKAKLFELEEQKKAEEKAKIEGIQLEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD R+ ET+++ VMDG+L+ FI +YL++K
Sbjct: 293 MVKDHRSNFETANVQGVMDGDLDDFINAYLQWK 325
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ +FWDN+ +AQ + ++K K + + +++ +L E D D + E
Sbjct: 2 AEPNFWDNQEQAQIVINENNELKQKYDNFKNLTDHVENLEVTAELLEMEDDPD--VQSEF 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S + K L + L LL+G YD A+I I GAGGT++Q
Sbjct: 60 ESELAATAKLLQDYRLGLLLNGKYDANNAIIEIHPGAGGTESQ 102
>gi|146319066|ref|YP_001198778.1| peptide chain release factor 2 [Streptococcus suis 05ZYH33]
gi|146321272|ref|YP_001200983.1| peptide chain release factor 2 [Streptococcus suis 98HAH33]
gi|386578248|ref|YP_006074654.1| Peptide chain release factor 2 [Streptococcus suis GZ1]
gi|386580313|ref|YP_006076718.1| peptide chain release factor 2 [Streptococcus suis JS14]
gi|386582328|ref|YP_006078732.1| peptide chain release factor 2 [Streptococcus suis SS12]
gi|386588515|ref|YP_006084916.1| peptide chain release factor 2 [Streptococcus suis A7]
gi|403061883|ref|YP_006650099.1| peptide chain release factor 2 [Streptococcus suis S735]
gi|145689872|gb|ABP90378.1| Protein chain release factor B [Streptococcus suis 05ZYH33]
gi|145692078|gb|ABP92583.1| Protein chain release factor B [Streptococcus suis 98HAH33]
gi|292558711|gb|ADE31712.1| Peptide chain release factor 2 [Streptococcus suis GZ1]
gi|319758505|gb|ADV70447.1| peptide chain release factor 2 [Streptococcus suis JS14]
gi|353734474|gb|AER15484.1| peptide chain release factor 2 [Streptococcus suis SS12]
gi|354985676|gb|AER44574.1| peptide chain release factor 2 [Streptococcus suis A7]
gi|402809209|gb|AFR00701.1| peptide chain release factor 2 [Streptococcus suis S735]
Length = 325
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 114/155 (73%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++++I ++++++ R+GG GGQNVNKV T VR+THIPTG+
Sbjct: 172 HTSFTSVEVMPEL-DDTIEIEIRDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVT 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKLLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RTG+E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTGYEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ D++ ++ E +S L+E+ +
Sbjct: 6 FWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDFLAEDESVRDELVEK----L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 VELDKTMTAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|406933330|gb|EKD68012.1| hypothetical protein ACD_48C00108G0001 [uncultured bacterium]
Length = 336
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/151 (53%), Positives = 101/151 (66%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ +VMP++ EES I EEDL F RAGGKGGQNVNKV TAVR+TH P+G+ V
Sbjct: 184 QTSFAMVDVMPVI-EESQITAIREEDLVWDFYRAGGKGGQNVNKVSTAVRLTHKPSGIIV 242
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ER Q N+ AL L++KL EE R E + +G WG QIR+YV HPY
Sbjct: 243 TCQSERQQGQNREYALKVLRSKLWTKEEENRQKEQAKYKGVYKTPGWGNQIRSYVLHPYH 302
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RT HETS+ V+DG++E FI +YLK
Sbjct: 303 MVKDLRTEHETSNTDRVLDGDIEDFIMAYLK 333
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 27/130 (20%)
Query: 14 ASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDF 73
A+D +E++ L + K ELE + FW EA +T++ + ++ +I
Sbjct: 9 ATDLIEKL----NLDEKRKLHRELEASSMKEDFWKETREAAKTMKRIAELAKEI------ 58
Query: 74 KTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVIS 133
+ +V+L LLE KEL K +++ E LSG YD+ A++S
Sbjct: 59 -----EEGEMVQL----------LLETGEE--KELTKEVNRLEFATYLSGSYDRGDAILS 101
Query: 134 ITAGAGGTDA 143
+ +G GGT+A
Sbjct: 102 LHSGQGGTEA 111
>gi|251782076|ref|YP_002996378.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242390705|dbj|BAH81164.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 331
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP L +++++V I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 176 HTSFVSVEVMPEL-DDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 235 ASTVDRTQYGNRDRAIKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYT 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +E + + VMDG++E FI +YLK++ S
Sbjct: 295 MVKDHRTNYEVAQVDKVMDGDIEGFIDAYLKWRMS 329
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E + + FW++ AQ+ Q L ++K + + D+ +++ EE DS
Sbjct: 1 MEHQMTEPDFWNDNIAAQKISQKLNELKSTYETFHNMQELSDETELYLEMLEEDDSVKDD 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L EA+ ++ L + L +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 L--EAS--LETLGQILASYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 104
>gi|418977881|ref|ZP_13525688.1| peptide chain release factor 2 [Streptococcus mitis SK575]
gi|383349082|gb|EID27032.1| peptide chain release factor 2 [Streptococcus mitis SK575]
Length = 329
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 176 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 235 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 295 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E +S
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHEE 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L+E+ + EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 LVEQ----LSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 104
>gi|408401329|ref|YP_006859292.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
equisimilis RE378]
gi|417753647|ref|ZP_12401752.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|417928881|ref|ZP_12572269.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|333769251|gb|EGL46388.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|340766755|gb|EGR89281.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|407967557|dbj|BAM60795.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
equisimilis RE378]
Length = 331
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP L +++++V I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 176 HTSFVSVEVMPEL-DDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 235 ASTVDRTQYGNRDRAIKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYT 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +E + + VMDG++E FI +YLK++ S
Sbjct: 295 MVKDHRTNYEVAQVDKVMDGDIEGFIDAYLKWRMS 329
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E + + FW++ AQ+ Q L ++K + + D+ +++ EE DS
Sbjct: 1 MEHQMTEPDFWNDNIAAQKISQKLNELKSTYETFHNMQELSDETELYLEMLEEDDSVKDD 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L EA+ ++ L + L +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 L--EAS--LETLGQILASYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 104
>gi|418143566|ref|ZP_12780366.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13494]
gi|353809307|gb|EHD89567.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13494]
Length = 325
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ EAQ+T Q L ++K+ N + D+ ++ E D + +E + +
Sbjct: 6 FWNDNIEAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DESVHDELVAQL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 AELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|167038149|ref|YP_001665727.1| peptide chain release factor 2 [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|166856983|gb|ABY95391.1| peptide chain release factor 2 [Thermoanaerobacter pseudethanolicus
ATCC 33223]
Length = 330
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 108/153 (70%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P L E ++V+I EDL+I RA G GGQ VNK E+AVRITH+PTG+ V
Sbjct: 174 HTSFALVEVLPEL-ENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKLL + +++ +I+ ++G+ +A WG QIR+YVF PY
Sbjct: 233 SCQSERSQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RT +E ++ +VMDGE++ FI +YLK K
Sbjct: 293 LVKDHRTNYEVGNVQAVMDGEIDGFINAYLKQK 325
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+D +FW + ++QE + +K+ + +K +D T+++L ++ D + +E
Sbjct: 2 SDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLSTLIELG--LEEGDESITDEV 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
KEL K L+ ++ LL+GPYDK A++SI AG+GGT+AQ
Sbjct: 60 DKEYKELKKKLEDLKIKTLLNGPYDKNNAILSIHAGSGGTEAQ 102
>gi|440783102|ref|ZP_20960913.1| peptide chain release factor 2 [Clostridium pasteurianum DSM 525]
gi|440219677|gb|ELP58888.1| peptide chain release factor 2 [Clostridium pasteurianum DSM 525]
Length = 327
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 108/164 (65%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ QTSF+ EV+P L E + D+ I EDL I RA G GGQ+VNK E+
Sbjct: 161 LVRISPFNANGKRQTSFASVEVIPELTE-NQDINIKAEDLRIDTYRASGAGGQHVNKTES 219
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
A+RITHIPTG+ V+C ERSQ +N+ A++ LKAKL+ + E +I+ + G+ +
Sbjct: 220 AIRITHIPTGIVVQCQNERSQHSNRESAMAMLKAKLVELKERAHKEKIEDLTGELKDNGF 279
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIR+YVFHPY +VKD RTG E ++I SVMDG ++ FI YLK
Sbjct: 280 GSQIRSYVFHPYTMVKDHRTGFEVANINSVMDGNIDSFITEYLK 323
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWDN +AQE Q +KD++ L+ +++D +++++++E + D +L E S I
Sbjct: 6 FWDNMKKAQEITQKSKMLKDRVELVNSLDERLEDTRSLIEMSKEEEDED--ILNEIVSEI 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL ++ F + LLSG YD+ A++ + GAGGTDAQ
Sbjct: 64 NELTVRIENFRIELLLSGEYDRNNAILDLHTGAGGTDAQ 102
>gi|340355245|ref|ZP_08677937.1| peptide chain release factor RF2 [Sporosarcina newyorkensis 2681]
gi|339622685|gb|EGQ27200.1| peptide chain release factor RF2 [Sporosarcina newyorkensis 2681]
Length = 334
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 107/155 (69%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS EVMP + +D+ + ED+++ R+ G GGQ+VN ++AVR+THIPTG V
Sbjct: 181 HTSFSSIEVMPEF-DGDIDLDLKTEDIKVDTYRSSGAGGQHVNTTDSAVRMTHIPTGAIV 239
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A++ LKAK+ I E+ + + +IRG+ + WG QIR+YVFHPY
Sbjct: 240 TCQTERSQIKNRERAMNLLKAKIYQIRVEEEEARLAEIRGEQKEIGWGSQIRSYVFHPYS 299
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT ET ++ SVMDG+L+PFI +YL+ + S
Sbjct: 300 MVKDHRTNEETGNVSSVMDGDLDPFINAYLRSRIS 334
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 8/114 (7%)
Query: 34 LAELEMKAADSSFWDNRAEAQETL---QALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
+ ELE + FWD++ AQ+ + AL D+ + N L D + ++ + +++ +
Sbjct: 1 MQELEEMMLEPGFWDDQDAAQKVISESNALKDIVGEYNDLNDTQENLEMTLELLREEADE 60
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ + S +KE +D+F+L LLS +DK AV+ I +GAGGT++Q
Sbjct: 61 ELQEE-----LVSELKEFKGRMDKFDLQMLLSDEFDKNNAVLEIHSGAGGTESQ 109
>gi|289577756|ref|YP_003476383.1| hypothetical protein Thit_0519 [Thermoanaerobacter italicus Ab9]
gi|289527469|gb|ADD01821.1| hypothetical protein Thit_0519 [Thermoanaerobacter italicus Ab9]
Length = 368
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 119/188 (63%), Gaps = 9/188 (4%)
Query: 117 LTQLLSGPY-----DKEGAV---ISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEE 168
+T ++ GP+ E V + I+ TSF+ EV+P L E+ ++V+I E
Sbjct: 177 VTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEVLPEL-EDDIEVEIRPE 235
Query: 169 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 228
DL I RA G GGQ VNK E+AVRITH+PTG+ V C ERSQ+ N+ A+ LKAKLL
Sbjct: 236 DLRIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQNERSQIQNRETAMKMLKAKLLD 295
Query: 229 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 288
+ +++ +I+ ++G+ +A WG QIR+YVF PY LVKD RT E ++ +VMDGE++ F
Sbjct: 296 LMMKEKKEKIEDLKGEHKEAAWGNQIRSYVFQPYTLVKDHRTNFEVGNVQAVMDGEIDDF 355
Query: 289 IKSYLKYK 296
I +YLK K
Sbjct: 356 INAYLKQK 363
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 84/144 (58%), Gaps = 5/144 (3%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+QD+ + +V + ++E+ S ++ +++E+ E++ K AD FW++ ++QE +
Sbjct: 2 LQDY---KAEVSKMFEEIKEMGVSLDIEGVKREVEEIDKKMADPDFWNDIKKSQELAKRQ 58
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
++K+ + K +D T+++L ++ D + EE KEL K L+ ++ L
Sbjct: 59 KELKELLEEYNSLVRKWEDLTTLIELG--LEEGDESITEEVDKEYKELKKKLEDLKIKTL 116
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
L+GPYDK A++SI AG+GGT+AQ
Sbjct: 117 LNGPYDKNNAILSIHAGSGGTEAQ 140
>gi|450103107|ref|ZP_21859376.1| peptide chain release factor 2 [Streptococcus mutans SF1]
gi|450172778|ref|ZP_21884555.1| peptide chain release factor 2 [Streptococcus mutans SM4]
gi|449217739|gb|EMC17772.1| peptide chain release factor 2 [Streptococcus mutans SF1]
gi|449242809|gb|EMC41340.1| peptide chain release factor 2 [Streptococcus mutans SM4]
Length = 325
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 110/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V I +ED+++ R+GG GGQNVNKV T VR+THIP+G+ V
Sbjct: 172 HTSFASVEVMPEL-DDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E S + VMDGEL+ FI ++LK++
Sbjct: 291 MVKDHRTNYEVSQVDRVMDGELDGFIDAFLKWR 323
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K K + D+ + ++ EE DS G LEE ++
Sbjct: 6 FWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEMLEEDDSL-QGELEE--DLV 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
K L+K + +E+T LLS YD A++ I G+GGT+AQ
Sbjct: 63 K-LDKIMTSYEMTLLLSELYDANNAILEIHPGSGGTEAQ 100
>gi|449971585|ref|ZP_21814442.1| peptide chain release factor 2 [Streptococcus mutans 2VS1]
gi|450031536|ref|ZP_21833730.1| peptide chain release factor 2 [Streptococcus mutans G123]
gi|450059730|ref|ZP_21843510.1| peptide chain release factor 2 [Streptococcus mutans NLML4]
gi|450093077|ref|ZP_21856439.1| peptide chain release factor 2 [Streptococcus mutans W6]
gi|450150398|ref|ZP_21876569.1| peptide chain release factor 2 [Streptococcus mutans 14D]
gi|450163879|ref|ZP_21880979.1| peptide chain release factor 2 [Streptococcus mutans B]
gi|449171879|gb|EMB74524.1| peptide chain release factor 2 [Streptococcus mutans 2VS1]
gi|449191553|gb|EMB93030.1| peptide chain release factor 2 [Streptococcus mutans G123]
gi|449202789|gb|EMC03679.1| peptide chain release factor 2 [Streptococcus mutans NLML4]
gi|449217522|gb|EMC17569.1| peptide chain release factor 2 [Streptococcus mutans W6]
gi|449233666|gb|EMC32728.1| peptide chain release factor 2 [Streptococcus mutans 14D]
gi|449242506|gb|EMC41088.1| peptide chain release factor 2 [Streptococcus mutans B]
Length = 325
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 110/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V I +ED+++ R+GG GGQNVNKV T VR+THIP+G+ V
Sbjct: 172 HTSFASVEVMPEL-DDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E S + VMDGEL+ FI ++LK++
Sbjct: 291 MVKDHRTNYEVSQVDRVMDGELDGFIDAFLKWR 323
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K K + D+ + ++ EE DS G LEE ++
Sbjct: 6 FWDDNVAAQKTSQELNELKLKYETFNSMQELSDETELLQEMLEEDDSL-QGELEE--DLV 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
K L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 63 K-LDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQ 100
>gi|415883540|ref|ZP_11545569.1| Protein chain release factor B [Bacillus methanolicus MGA3]
gi|387591335|gb|EIJ83652.1| Protein chain release factor B [Bacillus methanolicus MGA3]
Length = 327
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP +E ++++I EDL+I R+ G GGQ+VN ++AVRITHIPTG+ V
Sbjct: 174 HTSFVSCEVMPEFNDE-IEIEIRPEDLKIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A++ LKAKL E++ E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQTERSQIKNRERAMNMLKAKLYQKKIEEQEKELAEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE++PFI +YL+
Sbjct: 293 LVKDHRTNVEIGNVQAVMDGEIDPFINAYLR 323
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 61/101 (60%), Gaps = 6/101 (5%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAAS 103
FWD++ +AQ + +KD +N D M++ + ++LT E+ + DA L EE
Sbjct: 6 FWDDQQKAQAIINEANGLKDLVNEFND----MNETLENLELTYELVKEENDAELQEELEK 61
Query: 104 IIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+K+L K ++QFEL LLS PYDK A++ + GAGGT++Q
Sbjct: 62 ELKDLTKRVNQFELQLLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|418965378|ref|ZP_13517152.1| peptide chain release factor 2 [Streptococcus constellatus subsp.
constellatus SK53]
gi|383342574|gb|EID20786.1| peptide chain release factor 2 [Streptococcus constellatus subsp.
constellatus SK53]
Length = 325
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L ++++++++ +ED+++ R+GG GGQNVNKV T VR+THIPTG+
Sbjct: 172 HTSFTSVEVMPEL-DDTIEIEVRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVT 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKLLQAKLYQMEQEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E + + VMDG+L+ FI +YLK++
Sbjct: 291 MVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 323
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L +K N +F+ +M D +++ + + D + EE +
Sbjct: 6 FWDDNIAAQKTSQELNQLKQTYN---NFQ-QMTDLFDELEILLDFLAEDTSVQEELEEKL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 VELDKMMASYEMTLLLSEPYDNNNAILEIHPGSGGTEAQ 100
>gi|418104802|ref|ZP_12741862.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44500]
gi|418175558|ref|ZP_12812156.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41437]
gi|421226927|ref|ZP_15683641.1| peptide chain release factor 2 [Streptococcus pneumoniae 2072047]
gi|421235912|ref|ZP_15692513.1| peptide chain release factor 2 [Streptococcus pneumoniae 2071004]
gi|353779236|gb|EHD59702.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44500]
gi|353844118|gb|EHE24162.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41437]
gi|395597997|gb|EJG58203.1| peptide chain release factor 2 [Streptococcus pneumoniae 2072047]
gi|395604831|gb|EJG64963.1| peptide chain release factor 2 [Streptococcus pneumoniae 2071004]
Length = 293
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 140 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 198
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 199 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 258
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 259 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 293
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D + +E + + EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 18 DESVHDELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 68
>gi|343524660|ref|ZP_08761618.1| peptide chain release factor 2 [Streptococcus constellatus subsp.
pharyngis SK1060 = CCUG 46377]
gi|423068900|ref|ZP_17057688.1| peptide chain release factor 2 [Streptococcus intermedius F0395]
gi|343398309|gb|EGV10842.1| peptide chain release factor 2 [Streptococcus constellatus subsp.
pharyngis SK1060 = CCUG 46377]
gi|355366200|gb|EHG13919.1| peptide chain release factor 2 [Streptococcus intermedius F0395]
Length = 325
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L ++++++++ +ED+++ R+GG GGQNVNKV T VR+THIPTG+
Sbjct: 172 HTSFTSVEVMPEL-DDTIEIEVRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVT 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKLLQAKLYQMEQEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E + + VMDG+L+ FI +YLK++
Sbjct: 291 MVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 323
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K N +F+ +M D +++ + + D + EE +
Sbjct: 6 FWDDNIAAQKTSQELNELKQTYN---NFQ-QMTDLFDELEILLDFLAEDTSVQEELEEKL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 VELDKMMASYEMTLLLSEPYDNNNAILEIHPGSGGTEAQ 100
>gi|449889457|ref|ZP_21787557.1| peptide chain release factor 2 [Streptococcus mutans SA41]
gi|449250072|gb|EMC48154.1| peptide chain release factor 2 [Streptococcus mutans SA41]
Length = 325
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 110/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V I +ED+++ R+GG GGQNVNKV T VR+THIP+G+ V
Sbjct: 172 HTSFASVEVMPEL-DDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAQEVDTLKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E S + VMDGEL+ FI ++LK++
Sbjct: 291 MVKDHRTNYEVSQVDRVMDGELDGFIDAFLKWR 323
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K K + D+ + ++ EE DS G LEE ++
Sbjct: 6 FWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEMLEEDDSL-QGELEE--DLV 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
K L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 63 K-LDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQ 100
>gi|24379740|ref|NP_721695.1| peptide chain release factor 2 [Streptococcus mutans UA159]
gi|449866982|ref|ZP_21779680.1| peptide chain release factor 2 [Streptococcus mutans U2B]
gi|449873235|ref|ZP_21781676.1| peptide chain release factor 2 [Streptococcus mutans 8ID3]
gi|449877936|ref|ZP_21783421.1| peptide chain release factor 2 [Streptococcus mutans S1B]
gi|449884229|ref|ZP_21785553.1| peptide chain release factor 2 [Streptococcus mutans SA38]
gi|449899062|ref|ZP_21790880.1| peptide chain release factor 2 [Streptococcus mutans R221]
gi|449905730|ref|ZP_21793178.1| peptide chain release factor 2 [Streptococcus mutans M230]
gi|449916946|ref|ZP_21797097.1| peptide chain release factor 2 [Streptococcus mutans 15JP3]
gi|449920886|ref|ZP_21798727.1| peptide chain release factor 2 [Streptococcus mutans 1SM1]
gi|449944755|ref|ZP_21806864.1| peptide chain release factor 2 [Streptococcus mutans 11A1]
gi|449952230|ref|ZP_21808895.1| peptide chain release factor 2 [Streptococcus mutans 11SSST2]
gi|449980525|ref|ZP_21817250.1| peptide chain release factor 2 [Streptococcus mutans 5SM3]
gi|449999072|ref|ZP_21824299.1| peptide chain release factor 2 [Streptococcus mutans N29]
gi|450005664|ref|ZP_21826797.1| peptide chain release factor 2 [Streptococcus mutans NMT4863]
gi|450041337|ref|ZP_21837339.1| peptide chain release factor 2 [Streptococcus mutans T4]
gi|450068351|ref|ZP_21847139.1| peptide chain release factor 2 [Streptococcus mutans NLML9]
gi|450079181|ref|ZP_21851242.1| peptide chain release factor 2 [Streptococcus mutans N3209]
gi|450084242|ref|ZP_21853222.1| peptide chain release factor 2 [Streptococcus mutans N66]
gi|450088436|ref|ZP_21854790.1| peptide chain release factor 2 [Streptococcus mutans NV1996]
gi|450133123|ref|ZP_21870454.1| peptide chain release factor 2 [Streptococcus mutans NLML8]
gi|24377701|gb|AAN59001.1|AE014966_11 putative peptide chain release factor (RF-2) [Streptococcus mutans
UA159]
gi|449148348|gb|EMB52229.1| peptide chain release factor 2 [Streptococcus mutans 11A1]
gi|449151862|gb|EMB55584.1| peptide chain release factor 2 [Streptococcus mutans NLML8]
gi|449154170|gb|EMB57777.1| peptide chain release factor 2 [Streptococcus mutans 8ID3]
gi|449154687|gb|EMB58250.1| peptide chain release factor 2 [Streptococcus mutans 15JP3]
gi|449158039|gb|EMB61465.1| peptide chain release factor 2 [Streptococcus mutans 1SM1]
gi|449165416|gb|EMB68425.1| peptide chain release factor 2 [Streptococcus mutans 11SSST2]
gi|449176760|gb|EMB79088.1| peptide chain release factor 2 [Streptococcus mutans 5SM3]
gi|449187401|gb|EMB89190.1| peptide chain release factor 2 [Streptococcus mutans N29]
gi|449188333|gb|EMB90049.1| peptide chain release factor 2 [Streptococcus mutans NMT4863]
gi|449197832|gb|EMB98979.1| peptide chain release factor 2 [Streptococcus mutans T4]
gi|449207075|gb|EMC07757.1| peptide chain release factor 2 [Streptococcus mutans NLML9]
gi|449209113|gb|EMC09652.1| peptide chain release factor 2 [Streptococcus mutans N3209]
gi|449211890|gb|EMC12277.1| peptide chain release factor 2 [Streptococcus mutans N66]
gi|449216566|gb|EMC16675.1| peptide chain release factor 2 [Streptococcus mutans NV1996]
gi|449249194|gb|EMC47340.1| peptide chain release factor 2 [Streptococcus mutans SA38]
gi|449250165|gb|EMC48240.1| peptide chain release factor 2 [Streptococcus mutans S1B]
gi|449257911|gb|EMC55521.1| peptide chain release factor 2 [Streptococcus mutans M230]
gi|449258891|gb|EMC56446.1| peptide chain release factor 2 [Streptococcus mutans R221]
gi|449263551|gb|EMC60923.1| peptide chain release factor 2 [Streptococcus mutans U2B]
Length = 325
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 110/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V I +ED+++ R+GG GGQNVNKV T VR+THIP+G+ V
Sbjct: 172 HTSFASVEVMPEL-DDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E S + VMDGEL+ FI ++LK++
Sbjct: 291 MVKDHRTNYEVSQVDRVMDGELDGFIDAFLKWR 323
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K K + D+ + ++ EE DS G LEE ++
Sbjct: 6 FWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEMLEEDDSL-QGELEE--DLV 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
K L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 63 K-LDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQ 100
>gi|297544050|ref|YP_003676352.1| hypothetical protein Tmath_0587 [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296841825|gb|ADH60341.1| hypothetical protein Tmath_0587 [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 368
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 119/188 (63%), Gaps = 9/188 (4%)
Query: 117 LTQLLSGPY-----DKEGAV---ISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEE 168
+T ++ GP+ E V + I+ TSF+ EV+P L E+ ++V+I E
Sbjct: 177 VTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEVLPEL-EDDIEVEIRPE 235
Query: 169 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 228
DL I RA G GGQ VNK E+AVRITH+PTG+ V C ERSQ+ N+ A+ LKAKLL
Sbjct: 236 DLRIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQNERSQIQNRETAMKMLKAKLLD 295
Query: 229 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 288
+ +++ +I+ ++G+ +A WG QIR+YVF PY LVKD RT E ++ +VMDGE++ F
Sbjct: 296 LMMKEKKEKIEDLKGEHKEAAWGNQIRSYVFQPYTLVKDHRTNFEVGNVQAVMDGEIDDF 355
Query: 289 IKSYLKYK 296
I +YLK K
Sbjct: 356 INAYLKQK 363
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 84/144 (58%), Gaps = 5/144 (3%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+QD+ + +V + ++E+ S ++ +++E+ E++ + AD FW++ ++QE +
Sbjct: 2 LQDY---KAEVSKMFEEIKEMGVSLDIEGVKREIEEIDKEMADPDFWNDIKKSQELAKRQ 58
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
++K+ + K +D T+++L ++ D + EE KEL K L+ ++ L
Sbjct: 59 KELKELLEEYNSLVRKWEDLTTLIELG--LEEGDESITEEVDKEYKELKKKLEDLKIKTL 116
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
L+GPYDK A++SI AG+GGT+AQ
Sbjct: 117 LNGPYDKNNAILSIHAGSGGTEAQ 140
>gi|450110979|ref|ZP_21862460.1| peptide chain release factor 2 [Streptococcus mutans SM6]
gi|449224355|gb|EMC23996.1| peptide chain release factor 2 [Streptococcus mutans SM6]
Length = 325
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 110/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V I +ED+++ R+GG GGQNVNKV T VR+THIP+G+ V
Sbjct: 172 HTSFASVEVMPEL-DDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E S + VMDGEL+ FI ++LK++
Sbjct: 291 MVKDHRTNYEVSQVDRVMDGELDGFIDAFLKWR 323
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K K + D+ + ++ EE DS G LEE ++
Sbjct: 6 FWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEMLEEDDSL-QGELEE--DLV 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
K L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 63 K-LDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQ 100
>gi|365904806|ref|ZP_09442565.1| peptide chain release factor 2 [Lactobacillus versmoldensis KCTC
3814]
Length = 332
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++S+ + + ++DL + R+ G GGQ++NK +AVRITH+PTG+ V
Sbjct: 174 HTSFASVDVMPEL-DDSIKIDVNDDDLRVDVFRSSGAGGQHINKTSSAVRITHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ A+S LKAKL + +E++A +I+G+ + WG QIR+YVFHPY
Sbjct: 233 SSQAQRSQLQNRQTAMSMLKAKLFQLEQEEQAKRNAEIKGEQLDIGWGSQIRSYVFHPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD R+ +ET + +VMDGEL+PFI +YL++K
Sbjct: 293 MVKDHRSNYETGNGQAVMDGELDPFIYAYLQWK 325
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ +AQ+ + ++K+K + + +DD +L EE D +L E
Sbjct: 6 FWDDHDKAQQLIDTTNNLKNKFDNFKQLEQSVDDLKVSAELYEE--DNDPEMLSEMTDNC 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +++ L +ELT LLS YD A++ I GAGGT++Q
Sbjct: 64 QTVDQELRSYELTMLLSEEYDSHNAILEIHPGAGGTESQ 102
>gi|182624026|ref|ZP_02951814.1| peptide chain release factor 2 [Clostridium perfringens D str.
JGS1721]
gi|177910919|gb|EDT73273.1| peptide chain release factor 2 [Clostridium perfringens D str.
JGS1721]
Length = 323
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 103/150 (68%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P L + D++I DL I RAGG GGQ+VNK E+AVRITHIPTG+ V
Sbjct: 173 QTSFASVEVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVV 231
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ +N+ A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY
Sbjct: 232 QCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYS 291
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD RT ETS++ VMDG+++ FI +YL
Sbjct: 292 MVKDHRTNFETSNVNGVMDGDIDNFIIAYL 321
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
++ FWD+ +AQE Q VKDKI+ + ++DD + +L EE D A +E
Sbjct: 3 EAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETA---KEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S +K L+K +D ++ +LSG YD+ A++++ G GG+DA
Sbjct: 60 SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDAN 101
>gi|363899702|ref|ZP_09326210.1| peptide chain release factor 2 [Oribacterium sp. ACB1]
gi|395208290|ref|ZP_10397531.1| peptide chain release factor 2 [Oribacterium sp. ACB8]
gi|361958000|gb|EHL11303.1| peptide chain release factor 2 [Oribacterium sp. ACB1]
gi|394705871|gb|EJF13395.1| peptide chain release factor 2 [Oribacterium sp. ACB8]
Length = 378
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 111/162 (68%), Gaps = 4/162 (2%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF +VMP + E +D+++ EED+++ RA G GGQ++NK +AVR+ HIPTG+ V
Sbjct: 214 QTSFVSCDVMPDI-ETEIDIEVREEDIKMEVFRASGAGGQHINKTSSAVRLIHIPTGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C EERSQL NK KA+ LK KL + +E++ +++ IRG+ WG QIR+YV PY+
Sbjct: 273 ACQEERSQLQNKNKAMQMLKTKLYLKEKEEQEAKLAGIRGEVKDNGWGSQIRSYVLQPYR 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASD 305
+VKD+RTG ET + +V+DG+++ FI +YLK+ M L D
Sbjct: 333 MVKDLRTGEETGNTDAVLDGDIDRFITAYLKW---MQLGCPD 371
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M +F + ++ ++ ++ + + L+ +K +AEL+ + FW + +A +
Sbjct: 1 MIEFDQFKTELNTKTEPLKALEQALDLENKQKRIAELDRMMEEPDFWSDAEKANRLSTEV 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+KD+ KT +D ++++ +E D ++ E ++ + ++ L+ T L
Sbjct: 61 RHLKDEAESFYQLKTSYEDIDALIQMGKE--EGDESVIPEIREMLSQFSEDLENMNTTLL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDA 143
LSG YD ++ + AGAGGT+A
Sbjct: 119 LSGEYDSMNVILRLNAGAGGTEA 141
>gi|290580262|ref|YP_003484654.1| peptide chain release factor [Streptococcus mutans NN2025]
gi|387785911|ref|YP_006251007.1| putative peptide chain release factor [Streptococcus mutans LJ23]
gi|397649960|ref|YP_006490487.1| peptide chain release factor 2 [Streptococcus mutans GS-5]
gi|449894966|ref|ZP_21789427.1| peptide chain release factor 2 [Streptococcus mutans SF12]
gi|449910252|ref|ZP_21794624.1| peptide chain release factor 2 [Streptococcus mutans OMZ175]
gi|449931693|ref|ZP_21802483.1| peptide chain release factor 2 [Streptococcus mutans 3SN1]
gi|449936437|ref|ZP_21803984.1| peptide chain release factor 2 [Streptococcus mutans 2ST1]
gi|449960144|ref|ZP_21810525.1| peptide chain release factor 2 [Streptococcus mutans 4VF1]
gi|449984028|ref|ZP_21818802.1| peptide chain release factor 2 [Streptococcus mutans NFSM2]
gi|449992187|ref|ZP_21822227.1| peptide chain release factor 2 [Streptococcus mutans NVAB]
gi|449997982|ref|ZP_21824184.1| peptide chain release factor 2 [Streptococcus mutans A9]
gi|450013472|ref|ZP_21829963.1| peptide chain release factor 2 [Streptococcus mutans A19]
gi|450025871|ref|ZP_21831850.1| peptide chain release factor 2 [Streptococcus mutans U138]
gi|450045965|ref|ZP_21838694.1| peptide chain release factor 2 [Streptococcus mutans N34]
gi|450052875|ref|ZP_21841466.1| peptide chain release factor 2 [Streptococcus mutans NFSM1]
gi|450062878|ref|ZP_21844615.1| peptide chain release factor 2 [Streptococcus mutans NLML5]
gi|450107041|ref|ZP_21860813.1| peptide chain release factor 2 [Streptococcus mutans SF14]
gi|450118080|ref|ZP_21865149.1| peptide chain release factor 2 [Streptococcus mutans ST1]
gi|450120231|ref|ZP_21865589.1| peptide chain release factor 2 [Streptococcus mutans ST6]
gi|450126073|ref|ZP_21867973.1| peptide chain release factor 2 [Streptococcus mutans U2A]
gi|450139602|ref|ZP_21872585.1| peptide chain release factor 2 [Streptococcus mutans NLML1]
gi|450144137|ref|ZP_21873859.1| peptide chain release factor 2 [Streptococcus mutans 1ID3]
gi|450155523|ref|ZP_21878282.1| peptide chain release factor 2 [Streptococcus mutans 21]
gi|450159370|ref|ZP_21879401.1| peptide chain release factor 2 [Streptococcus mutans 66-2A]
gi|450175110|ref|ZP_21884960.1| peptide chain release factor 2 [Streptococcus mutans SM1]
gi|450182505|ref|ZP_21888351.1| peptide chain release factor 2 [Streptococcus mutans 24]
gi|254997161|dbj|BAH87762.1| putative peptide chain release factor [Streptococcus mutans NN2025]
gi|379132312|dbj|BAL69064.1| putative peptide chain release factor [Streptococcus mutans LJ23]
gi|392603529|gb|AFM81693.1| peptide chain release factor 2 [Streptococcus mutans GS-5]
gi|449151077|gb|EMB54821.1| peptide chain release factor 2 [Streptococcus mutans 1ID3]
gi|449162256|gb|EMB65404.1| peptide chain release factor 2 [Streptococcus mutans 3SN1]
gi|449165575|gb|EMB68571.1| peptide chain release factor 2 [Streptococcus mutans 2ST1]
gi|449167881|gb|EMB70731.1| peptide chain release factor 2 [Streptococcus mutans 4VF1]
gi|449180068|gb|EMB82248.1| peptide chain release factor 2 [Streptococcus mutans NVAB]
gi|449180637|gb|EMB82783.1| peptide chain release factor 2 [Streptococcus mutans NFSM2]
gi|449181325|gb|EMB83432.1| peptide chain release factor 2 [Streptococcus mutans A9]
gi|449187416|gb|EMB89204.1| peptide chain release factor 2 [Streptococcus mutans A19]
gi|449190416|gb|EMB91991.1| peptide chain release factor 2 [Streptococcus mutans U138]
gi|449199431|gb|EMC00496.1| peptide chain release factor 2 [Streptococcus mutans N34]
gi|449199720|gb|EMC00774.1| peptide chain release factor 2 [Streptococcus mutans NFSM1]
gi|449205289|gb|EMC06043.1| peptide chain release factor 2 [Streptococcus mutans NLML5]
gi|449222469|gb|EMC22195.1| peptide chain release factor 2 [Streptococcus mutans SF14]
gi|449225487|gb|EMC25084.1| peptide chain release factor 2 [Streptococcus mutans ST1]
gi|449230477|gb|EMC29734.1| peptide chain release factor 2 [Streptococcus mutans ST6]
gi|449231818|gb|EMC30974.1| peptide chain release factor 2 [Streptococcus mutans U2A]
gi|449232714|gb|EMC31812.1| peptide chain release factor 2 [Streptococcus mutans NLML1]
gi|449237128|gb|EMC36013.1| peptide chain release factor 2 [Streptococcus mutans 21]
gi|449241302|gb|EMC39938.1| peptide chain release factor 2 [Streptococcus mutans 66-2A]
gi|449244711|gb|EMC43075.1| peptide chain release factor 2 [Streptococcus mutans 24]
gi|449247391|gb|EMC45673.1| peptide chain release factor 2 [Streptococcus mutans SM1]
gi|449255133|gb|EMC53005.1| peptide chain release factor 2 [Streptococcus mutans SF12]
gi|449259956|gb|EMC57468.1| peptide chain release factor 2 [Streptococcus mutans OMZ175]
Length = 325
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 110/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V I +ED+++ R+GG GGQNVNKV T VR+THIP+G+ V
Sbjct: 172 HTSFASVEVMPEL-DDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E S + VMDGEL+ FI ++LK++
Sbjct: 291 MVKDHRTNYEVSQVDRVMDGELDGFIDAFLKWR 323
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K K + D+ + ++ EE DS G LEE ++
Sbjct: 6 FWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEMLEEDDSL-QGELEE--DLV 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
K L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 63 K-LDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQ 100
>gi|387928642|ref|ZP_10131320.1| peptide chain release factor 2 [Bacillus methanolicus PB1]
gi|387588228|gb|EIJ80550.1| peptide chain release factor 2 [Bacillus methanolicus PB1]
Length = 327
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP +E ++++I EDL+I R+ G GGQ+VN ++AVRITHIPTGV V
Sbjct: 174 HTSFVSCEVMPEFNDE-IEIEIRPEDLKIDTYRSSGAGGQHVNTTDSAVRITHIPTGVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A++ LKAKL E++ E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQTERSQIKNRERAMNMLKAKLYQKKIEEQEKELAEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDG+++PFI +YL+
Sbjct: 293 LVKDHRTNTEIGNVQAVMDGDIDPFINAYLR 323
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD++ +AQ + +KD +N D +++ +L +E DA L EE + +
Sbjct: 6 FWDDQQKAQTIINEANGLKDLVNEFNDLNETLENLDLTYELVKE--ENDAELKEELENEL 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
K+ K ++QFEL LL+ PYDK A++ + GAGGT++Q
Sbjct: 64 KDFTKRVNQFELQLLLNEPYDKNNAILELHPGAGGTESQ 102
>gi|450034832|ref|ZP_21834656.1| peptide chain release factor 2 [Streptococcus mutans M21]
gi|449196123|gb|EMB97418.1| peptide chain release factor 2 [Streptococcus mutans M21]
Length = 325
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 110/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V I +ED+++ R+GG GGQNVNKV T VR+THIP+G+ V
Sbjct: 172 HTSFASVEVMPEL-DDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E S + VMDGEL+ FI ++LK++
Sbjct: 291 MVKDHRTNYEVSQVDRVMDGELDGFIDAFLKWR 323
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K K + D+ + ++ EE DS G LEE ++
Sbjct: 6 FWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEMLEEDDSL-QGELEE--DLV 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
K L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 63 K-LDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQ 100
>gi|427443990|ref|ZP_18925868.1| peptide chain release factor 2 [Pediococcus lolii NGRI 0510Q]
gi|425786468|dbj|GAC46656.1| peptide chain release factor 2 [Pediococcus lolii NGRI 0510Q]
Length = 343
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++S++V I +DL + R+ G GGQ++NK +AVRITH+PTG+ V
Sbjct: 185 HTSFASVDVMPEL-DDSVEVNINPDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGIVV 243
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQL N++ A++ LKAKL + E+++A E ++ G ++ WG QIR+YVFHPY
Sbjct: 244 ASQAERSQLQNRVTAMNMLKAKLFELEEQKKAEEKAKLEGTQLEIGWGSQIRSYVFHPYS 303
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT ET+++ VMDG+L+ FI +YL++K
Sbjct: 304 MVKDHRTNLETANVQGVMDGDLDDFINAYLQWK 336
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 38 EMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGL 97
E K A+ FW+++ +AQ+ + +K K + + +++ ++L E M++ D +
Sbjct: 9 EAKMAEPDFWNDQEKAQKIINETNVLKAKYDNYKNLTDHVENLEVTLELLE-MEA-DPDV 66
Query: 98 LEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E + + K L + L LL+G YD A++ I GAGGT++Q
Sbjct: 67 QAEFEDELSQTAKLLRDYRLGLLLNGKYDANNAILEIHPGAGGTESQ 113
>gi|326204357|ref|ZP_08194215.1| peptide chain release factor 2 [Clostridium papyrosolvens DSM 2782]
gi|325985389|gb|EGD46227.1| peptide chain release factor 2 [Clostridium papyrosolvens DSM 2782]
Length = 373
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 154/277 (55%), Gaps = 25/277 (9%)
Query: 26 GLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLLTDFKTKMDDAVT 82
GLQ L+ L L ++ + +D + A TL A T+ +D + +L T+ +A
Sbjct: 102 GLQLLKHNLEALRLETLLTGPYD-KNNAILTLHAGAGGTEAQDWVQMLLRMFTRWGEAKG 160
Query: 83 I-VKLTEEMDSTDAGLLEEAASIIKE-----LNKALDQFELTQLLSGPYDKEGAVISITA 136
VK+ + +D +AG+ +I E L L ++ P+D G
Sbjct: 161 YEVKILDYLDGDEAGIKSVTIHVIGENAYGYLKSEKGVHRLVRI--SPFDSSGR------ 212
Query: 137 GAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITH 196
TSF+ A+VMP L ++++++ I +DL + RA G GGQ++NK ++A+RITH
Sbjct: 213 ------RHTSFASADVMPEL-DDTIEININPDDLRVDTYRASGAGGQHINKTDSAIRITH 265
Query: 197 IPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRN 256
IPTGV V C ERSQ NK A+ LKAKL + E ++ +I+ ++G ++ WG QIR+
Sbjct: 266 IPTGVVVSCQTERSQFQNKDTAMKMLKAKLFELKEREQKEKIEDLKGVQMEIAWGSQIRS 325
Query: 257 YVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
YVF PY LVKD RT +E ++ +VMDGEL+ FI +YL
Sbjct: 326 YVFCPYTLVKDHRTNYEEGNVDAVMDGELDGFINAYL 362
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 76/127 (59%), Gaps = 2/127 (1%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+EE+RAS + + E+AELE KA++ FW++ +Q+ LQ +K KI+ + ++
Sbjct: 18 LEEMRASLDIASISDEIAELEHKASEPEFWNDMENSQKILQKTKILKTKIDRFNNITSQW 77
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
+D T+ +L ++ D ++ E ++ L L+ L LL+GPYDK A++++ AG
Sbjct: 78 EDLFTLSELG--LEEQDESVIPEVGEGLQLLKHNLEALRLETLLTGPYDKNNAILTLHAG 135
Query: 138 AGGTDAQ 144
AGGT+AQ
Sbjct: 136 AGGTEAQ 142
>gi|288817909|ref|YP_003432256.1| peptide chain release factor RF-2 [Hydrogenobacter thermophilus
TK-6]
gi|384128671|ref|YP_005511284.1| peptide chain release factor 2 [Hydrogenobacter thermophilus TK-6]
gi|288787308|dbj|BAI69055.1| peptide chain release factor RF-2 [Hydrogenobacter thermophilus
TK-6]
gi|308751508|gb|ADO44991.1| peptide chain release factor 2 [Hydrogenobacter thermophilus TK-6]
Length = 369
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 119/187 (63%), Gaps = 9/187 (4%)
Query: 118 TQLLSGPY-----DKEGAV---ISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEED 169
T L+ GPY E V + I+ TSF+ V+P + +E ++++I EED
Sbjct: 177 TLLIKGPYAYGYLKGESGVHRLVRISPFDANARRHTSFASVSVVPQI-DEKINIEIREED 235
Query: 170 LEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVI 229
+++ RA G GGQ VNK +TAVRI HIPTG+TV C +ERSQ N++KAL LKAKL +
Sbjct: 236 IQMETFRASGAGGQYVNKTDTAVRIRHIPTGITVSCQQERSQFQNRLKALELLKAKLYQL 295
Query: 230 AEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFI 289
++ + K + G+ WG QIR+YVF PY++VKD+RTG E ++ +VMDG+++ FI
Sbjct: 296 ELQKLEEKKKALEGEKTDIGWGYQIRSYVFQPYQMVKDLRTGLEVGNVDAVMDGDIDSFI 355
Query: 290 KSYLKYK 296
+ YL++K
Sbjct: 356 EEYLRWK 362
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 67/124 (54%), Gaps = 3/124 (2%)
Query: 20 EIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDD 79
+++ + + +++EL +++M + ++FW+++ +A+E Q +++ I K+ ++
Sbjct: 18 DVQQAMDISSMKEELKKIDMSMSSTNFWEDQGKAKEITQRRKWLEETIKEFERIKSTLET 77
Query: 80 AVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAG 139
+++ +E D ++ E I+ + K + E+ LS DK A +++ AGAG
Sbjct: 78 LQELLEEVDEEDLETLSMIAEE---IQSVEKPIRDLEIKTFLSEEMDKNNAYLTVQAGAG 134
Query: 140 GTDA 143
GT+A
Sbjct: 135 GTEA 138
>gi|270290715|ref|ZP_06196939.1| peptide chain release factor 2 [Pediococcus acidilactici 7_4]
gi|270280775|gb|EFA26609.1| peptide chain release factor 2 [Pediococcus acidilactici 7_4]
Length = 343
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++S++V I +DL + R+ G GGQ++NK +AVRITH+PTG+ V
Sbjct: 185 HTSFASVDVMPEL-DDSVEVNINPDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGIVV 243
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQL N++ A++ LKAKL + E+++A E ++ G ++ WG QIR+YVFHPY
Sbjct: 244 ASQAERSQLQNRVTAMNMLKAKLFELEEQKKAEEKAKLEGTQLEIGWGSQIRSYVFHPYS 303
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT ET+++ VMDG+L+ FI +YL++K
Sbjct: 304 MVKDHRTNLETANVQGVMDGDLDDFINAYLQWK 336
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 38 EMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGL 97
E K A+ FW+++ +AQ+ + +K K + + +++ ++L E M++ D +
Sbjct: 9 EAKMAEPDFWNDQEKAQKIINETNVLKAKYDNFKNLTDHVENLEVTLELLE-MEA-DPDV 66
Query: 98 LEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E + + K L + L LL+G YD A++ I GAGGT++Q
Sbjct: 67 QAEFEDELSQTAKLLRDYRLGLLLNGKYDANNAILEIHPGAGGTESQ 113
>gi|418068673|ref|ZP_12705955.1| peptide chain release factor 2 [Pediococcus acidilactici MA18/5M]
gi|357539409|gb|EHJ23428.1| peptide chain release factor 2 [Pediococcus acidilactici MA18/5M]
Length = 343
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++S++V I +DL + R+ G GGQ++NK +AVRITH+PTG+ V
Sbjct: 185 HTSFASVDVMPEL-DDSVEVNINPDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGIVV 243
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQL N++ A++ LKAKL + E+++A E ++ G ++ WG QIR+YVFHPY
Sbjct: 244 ASQAERSQLQNRVTAMNMLKAKLFELEEQKKAEEKAKLEGTQLEIGWGSQIRSYVFHPYS 303
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT ET+++ VMDG+L+ FI +YL++K
Sbjct: 304 MVKDHRTNLETANVQGVMDGDLDDFINAYLQWK 336
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 38 EMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGL 97
E K A+ FW+++ +AQ+ + +K K + + +++ ++L E M++ D +
Sbjct: 9 EAKMAEPDFWNDQEKAQKIINETNVLKAKYDNFKNLTDHVENLEVTLELLE-MEA-DPDV 66
Query: 98 LEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E + + K L + L LL+G YD A++ I GAGGT++Q
Sbjct: 67 QAEFEDELSQTAKLLRDYRLGLLLNGKYDANNAILEIHPGAGGTESQ 113
>gi|347521912|ref|YP_004779483.1| peptide chain release factor [Lactococcus garvieae ATCC 49156]
gi|385833296|ref|YP_005871071.1| peptide chain release factor [Lactococcus garvieae Lg2]
gi|420144463|ref|ZP_14651951.1| Peptide chain release factor 2 (RF-2) [Lactococcus garvieae IPLA
31405]
gi|343180480|dbj|BAK58819.1| peptide chain release factor [Lactococcus garvieae ATCC 49156]
gi|343182449|dbj|BAK60787.1| peptide chain release factor [Lactococcus garvieae Lg2]
gi|391855915|gb|EIT66464.1| Peptide chain release factor 2 (RF-2) [Lactococcus garvieae IPLA
31405]
Length = 365
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 110/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L +++++V + + D+++ R+GG GGQNVNKV T VR+TH+PTG+ V
Sbjct: 213 HTSFTSVDVMPEL-DDTVEVDVRDADIKMDTFRSGGAGGQNVNKVSTGVRLTHVPTGIVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ KA++ LK+KL + +++ +E+ ++RGD WG QIR+YVF PY+
Sbjct: 272 ASTMDRTQYGNRDKAMAMLKSKLYQLEMDKKQAEVDELRGDQSDISWGSQIRSYVFMPYQ 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RT +ET I VMDG+L+ FI +YL++K
Sbjct: 332 LVKDTRTEYETGQIDKVMDGDLDGFIHAYLRWK 364
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 78/139 (56%), Gaps = 4/139 (2%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R +EA +VE+ R S L +LE+E+A L+ A+ FW++ AQ+ + +K K
Sbjct: 6 IRNKLEAYGQKVEDFRGSLDLDRLEEEIALLDNDMAEPDFWNDNEAAQKVIDESNALKAK 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGL-LEEAASIIKELNKALDQFELTQLLSGPY 125
T +D+ ++++ +E D D + LEE +++L K ++ +EL +L+ PY
Sbjct: 66 YENFMSIATLHEDSEVMLEMLQEEDDEDMQVELEEN---VEKLGKKIETYELEIMLNQPY 122
Query: 126 DKEGAVISITAGAGGTDAQ 144
D A++ I G+GGT++Q
Sbjct: 123 DHMNAILEIHPGSGGTESQ 141
>gi|168215798|ref|ZP_02641423.1| peptide chain release factor 2 [Clostridium perfringens NCTC 8239]
gi|182382266|gb|EDT79745.1| peptide chain release factor 2 [Clostridium perfringens NCTC 8239]
Length = 323
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 103/150 (68%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P L + D++I DL I RAGG GGQ+VNK E+AVRITHIPTG+ V
Sbjct: 173 QTSFASVEVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVV 231
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ +N+ A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY
Sbjct: 232 QCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYS 291
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD RT ETS++ VMDG+++ FI +YL
Sbjct: 292 MVKDHRTNFETSNVNGVMDGDIDNFIIAYL 321
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
++ FWD+ +AQE Q VKDKI+ + ++DD + +L EE D A +E
Sbjct: 3 EAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETA---QEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S +K L+K +D ++ +LSG YD+ A++++ G GG+DA
Sbjct: 60 SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDAN 101
>gi|332877580|ref|ZP_08445324.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|332684429|gb|EGJ57282.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
taxon 329 str. F0087]
Length = 315
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 107/150 (71%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL +++++++I D+ R+ G GGQNVNKVETAVR+ H PTG+ +
Sbjct: 156 HTSFASVYVYPL-ADDTIEIEINPADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIII 214
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+E RSQL NK KAL LK++L I ++R ++ +I +K EWG QIRNYV HPYK
Sbjct: 215 ENSETRSQLDNKNKALQLLKSQLYEIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYK 274
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRTG+E++D+ SVM+GEL+ F+K+YL
Sbjct: 275 LVKDVRTGYESTDVDSVMNGELDDFLKAYL 304
>gi|450072277|ref|ZP_21848514.1| peptide chain release factor 2 [Streptococcus mutans M2A]
gi|449211586|gb|EMC11986.1| peptide chain release factor 2 [Streptococcus mutans M2A]
Length = 325
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 110/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V I +ED+++ R+GG GGQNVNKV T VR+THIP+G+ V
Sbjct: 172 HTSFASVEVMPEL-DDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E S + VMDGEL+ FI ++LK++
Sbjct: 291 MVKDHRTNYEVSQVDRVMDGELDGFIDAFLKWR 323
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K K + D+ + ++ EE DS G LEE +I
Sbjct: 6 FWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEMLEEDDSL-QGELEE--DLI 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
K L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 63 K-LDKIMISYEMTLLLSEPYDANNAILEIHPGSGGTEAQ 100
>gi|418112101|ref|ZP_12749104.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41538]
gi|353785750|gb|EHD66168.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41538]
Length = 279
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 126 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 184
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 185 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 244
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 245 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 279
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D + +E + + EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 4 DESVHDELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 54
>gi|118586958|ref|ZP_01544390.1| peptide chain release factor 2 [Oenococcus oeni ATCC BAA-1163]
gi|118432580|gb|EAV39314.1| peptide chain release factor 2 [Oenococcus oeni ATCC BAA-1163]
Length = 378
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 107/155 (69%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++ ++++I +D+++ R+GG GGQNVNKV TAVR+THIPTG+ V
Sbjct: 219 HTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQNVNKVSTAVRLTHIPTGLVV 278
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ER+Q N+ A+ LKAKL E++R E ++ G + WG QIR+YVF PY+
Sbjct: 279 ASQVERTQYGNRDIAMKMLKAKLYEREEQKREEEHAKLSGTKLDVAWGSQIRSYVFQPYR 338
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD+R+G+ET D VMDG L+PFI +YLK+K S
Sbjct: 339 MVKDLRSGYETGDTDGVMDGNLDPFINAYLKWKLS 373
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
Query: 8 RKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI 67
R + ++++ R++ L L+ +AE E K + FWD++ AQ+ + +K++
Sbjct: 13 RNSISDMQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRR 72
Query: 68 NLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDK 127
+ + ++D + +L E D DA + E + I++ K L+++ L QLL+ YD
Sbjct: 73 DSFLSLQKSVEDLTAMAELLSEED--DADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDS 130
Query: 128 EGAVISITAGAGGTDA 143
A++ I G GGT++
Sbjct: 131 NNAILEIHPGEGGTES 146
>gi|350565918|ref|ZP_08934640.1| peptide chain release factor RF2 [Peptoniphilus indolicus ATCC
29427]
gi|348663296|gb|EGY79887.1| peptide chain release factor RF2 [Peptoniphilus indolicus ATCC
29427]
Length = 348
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 108/153 (70%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS +V P + + +++V+I EDL++ R+ G GGQ+VN ++AVRITHIPTG+ V
Sbjct: 193 HTSFSSVDVYPQI-DGAVEVEIRAEDLKVDTYRSSGAGGQHVNTTDSAVRITHIPTGIVV 251
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ+ N+ A++ LKAKL+ +AEE++ +I ++G+ + WG QIR+YVF PY
Sbjct: 252 QCQNERSQIQNRETAMNMLKAKLIALAEEEQKEKIDDLQGNYSQIAWGSQIRSYVFQPYT 311
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RT E D+ VMDG+L+ FI SYL+ K
Sbjct: 312 LVKDHRTNTEVGDVNRVMDGDLDEFINSYLQLK 344
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 7/121 (5%)
Query: 25 AGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIV 84
AGL++ KEL + K + +FWDN AQ+ ++ L + K++ K+++A ++
Sbjct: 7 AGLREKVKELND---KQLEPNFWDNSESAQKVIKELNHHQGKVDKYDKLSKKIEEANDLI 63
Query: 85 KLTE-EMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+L E E D T +E ++++ K D+F+L LL+G YD +++I AGAGGT+A
Sbjct: 64 ELMELEEDFT---FYDEFKKDLEDIEKFADEFKLETLLNGEYDANDCILTIHAGAGGTEA 120
Query: 144 Q 144
Q
Sbjct: 121 Q 121
>gi|116333278|ref|YP_794805.1| protein chain release factor B [Lactobacillus brevis ATCC 367]
gi|116098625|gb|ABJ63774.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
brevis ATCC 367]
Length = 343
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P L ++S+D+ I +L++ RA G GGQ+VNK +AVRITHIPTG+
Sbjct: 185 HTSFASVDVLPEL-DDSVDIDINPAELKVDVYRASGAGGQHVNKTSSAVRITHIPTGIVT 243
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ +RSQL N+ AL+ L+AKL AEE++A E + GD ++ WG QIR+YVFHPY
Sbjct: 244 QSQAQRSQLQNRQTALAMLRAKLYERAEEKKAQEKAALEGDQMEIGWGSQIRSYVFHPYT 303
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +ET + +VMDG+L+PFI ++L+++ S
Sbjct: 304 MVKDHRTNYETGNGQAVMDGDLDPFIDAFLQWQLS 338
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 38 EMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGL 97
E + A FWD+ AQ + ++K K++ T+++D + ++L +E DA +
Sbjct: 9 EGQMAQPDFWDDAQAAQLLIDETNEMKKKVDEFQRLVTQVEDLMVALELLQE--EPDAEM 66
Query: 98 LEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E + AL Q+ L LL+ YD A++ I GAGGT++Q
Sbjct: 67 QAEFETDFATAQAALRQYRLNLLLNQKYDHNNALLEIHPGAGGTESQ 113
>gi|421186916|ref|ZP_15644297.1| peptide chain release factor 2 [Oenococcus oeni AWRIB418]
gi|399965166|gb|EJN99792.1| peptide chain release factor 2 [Oenococcus oeni AWRIB418]
Length = 372
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 107/155 (69%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++ ++++I +D+++ R+GG GGQNVNKV TAVR+THIPTG+ V
Sbjct: 213 HTSFVSIDVMPELDDDEIEIEIKPQDVKMDVYRSGGAGGQNVNKVSTAVRLTHIPTGLVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ER+Q N+ A+ LKAKL E++R E ++ G + WG QIR+YVF PY+
Sbjct: 273 ASQVERTQYGNRDIAMKMLKAKLYEREEQKREEEHAKLSGTKLDVAWGSQIRSYVFQPYR 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD+R+G+ET D VMDG L+PFI +YLK+K S
Sbjct: 333 MVKDLRSGYETGDTDGVMDGNLDPFINAYLKWKLS 367
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
Query: 8 RKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI 67
R + ++++ R++ L L+ +AE E K + FWD++ AQ+ + +K++
Sbjct: 7 RNSISDMQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRR 66
Query: 68 NLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDK 127
+ + ++D + +L E D DA + E + I++ K L+++ L QLL+ YD
Sbjct: 67 DSFLSLQKSVEDLTAMAELLSEED--DADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDS 124
Query: 128 EGAVISITAGAGGTDA 143
A++ I G GGT++
Sbjct: 125 NNAILEIHPGEGGTES 140
>gi|422851909|ref|ZP_16898579.1| peptide chain release factor RF2 [Streptococcus sanguinis SK150]
gi|325694230|gb|EGD36146.1| peptide chain release factor RF2 [Streptococcus sanguinis SK150]
Length = 325
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++ +E+ ++GD + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQLEQEKQVAEVDSLKGDKKEISWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E + + VMDG+L+ FI +YLK++
Sbjct: 291 MVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 323
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K D++ ++ E +S E +
Sbjct: 6 FWDDNIAAQKTSQDLNELKQTYENFHQMTELFDESEILLDFLAEDESVQG----ELEEKL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 AELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQ 100
>gi|365851223|ref|ZP_09391663.1| peptide chain release factor 2 [Lactobacillus parafarraginis F0439]
gi|363717255|gb|EHM00635.1| peptide chain release factor 2 [Lactobacillus parafarraginis F0439]
Length = 368
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++ +++ I +DL + R+ G GGQ++NK +AVRITHIPTG+ V
Sbjct: 210 HTSFASVDVMPELNDD-VEININPDDLRVDVYRSSGAGGQHINKTSSAVRITHIPTGIVV 268
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ A++ LK+KL + ++++A E +I G+ + WG QIR+YVFHPY
Sbjct: 269 ASQAQRSQLQNRQTAMNMLKSKLYELEQQKKAEEKAKIEGEQLDIGWGSQIRSYVFHPYS 328
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +ETS++ VMDG+L+PFI +YL+++ S
Sbjct: 329 MVKDHRTNYETSNVDGVMDGDLDPFINAYLQWQLS 363
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Query: 38 EMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGL 97
E K A+ FWDN+ AQ+ + +K K + T ++++D +L E D DAG+
Sbjct: 34 ESKMAEPGFWDNQEAAQKLIDETNQMKTKKDNFTKLASELEDLKVTFELIE--DDPDAGM 91
Query: 98 LEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ + ++L K LDQ++L LL+G YD A++ I GAGGT+AQ
Sbjct: 92 QNDFVTEAEKLKKQLDQYQLGLLLNGRYDHNNAILEIHPGAGGTEAQ 138
>gi|304386240|ref|ZP_07368573.1| peptide chain release factor RF2 [Pediococcus acidilactici DSM
20284]
gi|304327597|gb|EFL94824.1| peptide chain release factor RF2 [Pediococcus acidilactici DSM
20284]
Length = 362
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++S++V I +DL + R+ G GGQ++NK +AVRITH+PTG+ V
Sbjct: 204 HTSFASVDVMPEL-DDSVEVNINPDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGIVV 262
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQL N++ A++ LKAKL + E+++A E ++ G ++ WG QIR+YVFHPY
Sbjct: 263 ASQAERSQLQNRVTAMNMLKAKLFELEEQKKAEEKAKLEGTQLEIGWGSQIRSYVFHPYS 322
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT ET+++ VMDG+L+ FI +YL++K
Sbjct: 323 MVKDHRTNLETANVQGVMDGDLDDFINAYLQWK 355
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L L + ++ E K A+ FW+++ +AQ+ + +K K + + +++ ++L
Sbjct: 17 LDALNESISVNEAKMAEPDFWNDQEKAQKIINETNVLKAKYDNFKNLTDHVENLEVTLEL 76
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E M++ D + E + + K L + L LL+G YD A++ I GAGGT++Q
Sbjct: 77 LE-MEA-DPDVQAEFEDELSQTAKLLRDYRLGLLLNGKYDANNAILEIHPGAGGTESQ 132
>gi|385263221|ref|ZP_10041313.1| peptide chain release factor 2 [Streptococcus sp. SK643]
gi|385188535|gb|EIF36020.1| peptide chain release factor 2 [Streptococcus sp. SK643]
Length = 329
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 176 HTSFTSVEVMPEL-DDTIEVDIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 235 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 295 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E D
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLVE----DES 56
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ EE + + EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 57 VEEELVNQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 104
>gi|335029031|ref|ZP_08522543.1| peptide chain release factor 2 [Streptococcus infantis SK1076]
gi|334269432|gb|EGL87849.1| peptide chain release factor 2 [Streptococcus infantis SK1076]
Length = 329
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 176 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 235 ASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 295 MVKDHRTNFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N KMD+ V++ + + D
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFH----KMDELQDEVEILLDFLAEDES 56
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +E + EL++ + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 57 VKDELVEKLDELDQMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 104
>gi|328956713|ref|YP_004374099.1| peptide chain release factor 2 [Carnobacterium sp. 17-4]
gi|328673037|gb|AEB29083.1| peptide chain release factor 2 [Carnobacterium sp. 17-4]
Length = 351
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 111/157 (70%), Gaps = 1/157 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +V+P L ++S+D++I +DL++ RA G GGQ++N ++AVRITH+PTGV V
Sbjct: 194 HTSFVSIDVVPEL-DDSVDIKINSDDLKVDTYRASGAGGQHINTTDSAVRITHMPTGVVV 252
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+S LKAKL + E+ E+ IRG+ ++ WG QIR+YVFHPY
Sbjct: 253 ASQAQRSQLKNREQAMSMLKAKLHQLEVEEHEKEMAAIRGEQLEIGWGSQIRSYVFHPYS 312
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 300
+VKD RT +ET +I VMDG ++PFI++YL+ K S +
Sbjct: 313 MVKDHRTNYETGNISQVMDGGIDPFIQAYLRSKISTT 349
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L+ LE+++AE + + +FWD+ +AQ + ++K+K N D T+ ++ ++++
Sbjct: 7 LETLERDIAEYNDRMTEPTFWDDAQKAQAIINEANELKEKYNQYKDLLTEKEELDLLLEM 66
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+E D L++E S I LDQ+EL LLS PYDK A+I + GAGGT++Q
Sbjct: 67 VKE--ENDEELVKELDSKINPFLDKLDQYELELLLSDPYDKNNAIIELHPGAGGTESQ 122
>gi|110801299|ref|YP_696849.1| peptide chain release factor 2 [Clostridium perfringens ATCC 13124]
Length = 362
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 103/150 (68%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P L + D++I DL I RAGG GGQ+VNK E+AVRITHIPTG+ V
Sbjct: 212 QTSFASVEVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ +N+ A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY
Sbjct: 271 QCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYS 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD RT ETS++ VMDG+++ FI +YL
Sbjct: 331 MVKDHRTNVETSNVNGVMDGDIDNFIIAYL 360
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 77/129 (59%), Gaps = 3/129 (2%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
+ ++E+ AS L LEK+ AELE+K ++ FWD+ +AQE Q VKDKI+ +
Sbjct: 15 NNLKEMGASLDLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNE 74
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
++DD + +L EE D A +E S +K L+K +D ++ +LSG YD+ A++++
Sbjct: 75 RIDDVEVLKELMEENDEETA---KEIISEVKALSKEIDTLKIETILSGEYDRNDAILTLH 131
Query: 136 AGAGGTDAQ 144
G GG+DA
Sbjct: 132 TGVGGSDAN 140
>gi|379734499|ref|YP_005328005.1| peptide chain release factor 2 [Blastococcus saxobsidens DD2]
gi|378782306|emb|CCG01966.1| Peptide chain release factor 2 [Blastococcus saxobsidens DD2]
Length = 370
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 160/279 (57%), Gaps = 27/279 (9%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLLTDF------KTKM 77
L+ L+K +AELE++ S +D+R EA T+++ D D +L + K
Sbjct: 101 LENLQKVIAELEVRTLLSGEYDSR-EALVTIRSEAGGVDAADFAEMLMRMYLRWAERHKY 159
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
V V EE A + L+ L ++ P+D +G
Sbjct: 160 PTEVYDVSYAEEAGIKSATFTVKVPYAYGTLSVEQGTHRLVRI--SPFDNQGR------- 210
Query: 138 AGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 197
QTSF+G EV+P++ E++ V+IPE ++ + R+ G GGQ+VN ++AVR+THI
Sbjct: 211 -----RQTSFAGVEVLPVV-EQTDHVEIPENEIRVDVFRSSGPGGQSVNTTDSAVRMTHI 264
Query: 198 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 257
PTG+ V C E+SQ+ N+ AL L+A+LLV+ ++++ +E+ ++G+ + WG Q+R+Y
Sbjct: 265 PTGIVVSCQNEKSQIQNRAAALRVLQARLLVVRQQEQKAEMDALKGEG--SSWGNQMRSY 322
Query: 258 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
V HPY++VKD+RT HET + +V+DGE++ F+++ ++++
Sbjct: 323 VLHPYQMVKDLRTEHETGNTAAVLDGEIDSFVEAGIRWR 361
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 6/125 (4%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
I A + ++ +E+AELE++ WD+ AQ L+ ++ + + + + +++D
Sbjct: 19 IEAVLDVDRMRREVAELELQTGAPDLWDDVEAAQALTSKLSYMQGDLRRVEELRGRLED- 77
Query: 81 VTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGA 138
V L EM + D EA ++ L K + + E+ LLSG YD A+++I + A
Sbjct: 78 ---VGLLHEMAAEENDEATTAEAERELENLQKVIAELEVRTLLSGEYDSREALVTIRSEA 134
Query: 139 GGTDA 143
GG DA
Sbjct: 135 GGVDA 139
>gi|325105358|ref|YP_004275012.1| peptide chain release factor 2 (bRF-2) [Pedobacter saltans DSM
12145]
gi|324974206|gb|ADY53190.1| bacterial peptide chain release factor 2 (bRF-2) [Pedobacter
saltans DSM 12145]
Length = 362
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 107/163 (65%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ V PL+ ++++D+Q+ DLE R+GG GGQNVNKVET
Sbjct: 194 LVRISPFDSNAKRHTSFASVYVYPLI-DDNIDIQVNPADLEFETFRSGGAGGQNVNKVET 252
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVR+ H PTG+ ++ E RSQL NK A+ LK++L I +R + I D K EW
Sbjct: 253 AVRLYHKPTGIIIKNQESRSQLQNKENAIRLLKSQLYEIEMRKRREKSAAIESDKKKIEW 312
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYV HPYKL+KD RT +ETS++ V+DG+L+ FIK+YL
Sbjct: 313 GSQIRNYVLHPYKLIKDNRTDYETSNVQDVLDGDLDEFIKAYL 355
>gi|322392321|ref|ZP_08065782.1| peptide chain release factor RF2 [Streptococcus peroris ATCC
700780]
gi|321144856|gb|EFX40256.1| peptide chain release factor RF2 [Streptococcus peroris ATCC
700780]
Length = 325
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTNFEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K N KMD+ V++ + + D + +E +
Sbjct: 6 FWNDNIAAQKTSQELNELKHTYNTFH----KMDELQDEVEILLDFLAEDESVKDELVEKL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL + + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 DELAQMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|336054486|ref|YP_004562773.1| peptide chain release factor RF2 [Lactobacillus kefiranofaciens
ZW3]
gi|333957863|gb|AEG40671.1| Peptide chain release factor RF2 [Lactobacillus kefiranofaciens
ZW3]
Length = 332
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 112/165 (67%), Gaps = 1/165 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ EV+P + ++S+ + I +DL I R+ G GGQ++NK +
Sbjct: 161 LVRISPFDAAKRRHTSFASVEVIPEV-DDSIQIDINPKDLRIDVYRSSGAGGQHINKTSS 219
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PTG+ +RSQL N+ A++ L+AKL + EE++ + + ++GD + W
Sbjct: 220 AVRITHLPTGIVTTSQAQRSQLQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGW 279
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
G QIR+YVFHPY LVKD+RTG+ET+D VMDG+L+PFI +YL++
Sbjct: 280 GSQIRSYVFHPYNLVKDLRTGYETADANGVMDGKLQPFIYAYLQW 324
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A FWD++ +AQ+ + +K+K + K +D T ++L E D L +E
Sbjct: 2 AQPDFWDDQDKAQKLISDNNILKEKRDSFLKLKKGYEDETTALELLRE--EPDPELQKEV 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+ + L + +EL LLSG YD A++ I GAGGT+A
Sbjct: 60 EADLDSLQEEFYNYELDLLLSGKYDSHNALLEIHPGAGGTEA 101
>gi|281185482|sp|Q0TNE1.2|RF2_CLOP1 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|255529900|gb|ABG84933.2| peptide chain release factor 2, programmed frameshift [Clostridium
perfringens ATCC 13124]
Length = 362
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 103/150 (68%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P L + D++I DL I RAGG GGQ+VNK E+AVRITHIPTG+ V
Sbjct: 212 QTSFASVEVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ +N+ A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY
Sbjct: 271 QCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYS 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD RT ETS++ VMDG+++ FI +YL
Sbjct: 331 MVKDHRTNVETSNVNGVMDGDIDNFIIAYL 360
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 77/129 (59%), Gaps = 3/129 (2%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
+ ++E+ AS L LEK+ AELE+K ++ FWD+ +AQE Q VKDKI+ +
Sbjct: 15 NNLKEMGASLCLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNE 74
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
++DD + +L EE D A +E S +K L+K +D ++ +LSG YD+ A++++
Sbjct: 75 RIDDVEVLKELMEENDEETA---KEIISEVKALSKEIDTLKIETILSGEYDRNDAILTLH 131
Query: 136 AGAGGTDAQ 144
G GG+DA
Sbjct: 132 TGVGGSDAN 140
>gi|377832078|ref|ZP_09815042.1| peptide chain release factor RF2 [Lactobacillus mucosae LM1]
gi|377554085|gb|EHT15800.1| peptide chain release factor RF2 [Lactobacillus mucosae LM1]
Length = 355
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 107/155 (69%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++S+ + I DL + R+ G GGQ++NK E+AVRITH+PTG+ V
Sbjct: 197 HTSFASVDVMPEL-DDSVQIDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHLPTGIVV 255
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQL N+ A+S LK+KL + EE++A + +I G + WG QIR+YVF PY
Sbjct: 256 ASQAERSQLQNRQTAMSMLKSKLYELEEEKQAKQRAEIEGVQLDIGWGSQIRSYVFQPYT 315
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD R+G+ET D+ VMDG L+PFI +YL+++ S
Sbjct: 316 MVKDNRSGYETHDVQGVMDGNLDPFINAYLQWRLS 350
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 21 IRASAGL---QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+ AS GL L + +AE E + D +FW++ AQ+ + D+K K + K ++
Sbjct: 1 MHASGGLFDLDALNERIAENEHRMTDPNFWNDNETAQKVINENNDLKAKRDTYVHLKEQL 60
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
++ T ++L E TD L E K L ++ LTQLL GPYD + A++ I G
Sbjct: 61 ENLQTTIELLSE--DTDDELQSEFELDYAATQKELQEYRLTQLLDGPYDDKNAILEIHPG 118
Query: 138 AGGTDAQ 144
AGGT+AQ
Sbjct: 119 AGGTEAQ 125
>gi|449967856|ref|ZP_21812771.1| peptide chain release factor 2 [Streptococcus mutans 15VF2]
gi|449168149|gb|EMB70984.1| peptide chain release factor 2 [Streptococcus mutans 15VF2]
Length = 325
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L + +++V I +ED+++ R+GG GGQNVNKV T VR+THIP+G+ V
Sbjct: 172 HTSFASVEVMPEL-DNTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E S + VMDGEL+ FI ++LK++
Sbjct: 291 MVKDHRTNYEVSQVDRVMDGELDGFIDAFLKWR 323
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K K + D+ + ++ EE DS G LEE ++
Sbjct: 6 FWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEMLEEDDSL-QGELEE--DLV 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
K L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 63 K-LDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQ 100
>gi|239623407|ref|ZP_04666438.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239522373|gb|EEQ62239.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 338
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 109/164 (66%), Gaps = 4/164 (2%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF ++MP + +E +D++I +D+ I R+ G GGQ++NK +A+RITH P+G V
Sbjct: 174 QTSFVSCDIMPDI-QEDIDIEINPDDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ NK KA+ LK+KL ++ +E++A++ IRGD WG QIR+YV PY
Sbjct: 233 TCQNERSQFQNKDKAMQMLKSKLFLLKQEEQAAKAAGIRGDVKDNGWGSQIRSYVLQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDAN 307
+VKD RTG E+ ++ +V+DG ++ FI +YL++ MSL D N
Sbjct: 293 MVKDHRTGEESGNVDAVLDGNIDSFISAYLRW---MSLGCPDKN 333
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWDN ++ ++ ++KD++ + + + +D ++++ E DA L+ E ++
Sbjct: 6 FWDNPEKSTRMVREAKNLKDEVETFRELEQEYEDIQVMIQMGYE--ENDASLIPEIEEML 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+ L++ + LLSG YD A++ + AGAGGT++
Sbjct: 64 GHFSDTLEKMRMKLLLSGEYDSNNAILRLNAGAGGTES 101
>gi|302024124|ref|ZP_07249335.1| peptide chain release factor 2 [Streptococcus suis 05HAS68]
Length = 253
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 114/155 (73%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++++I ++++++ R+GG GGQNVNKV T VR+THIPTG+
Sbjct: 100 HTSFTSVEVMPEL-DDTIEIEIRDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVT 158
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 159 QSTVDRTQYGNRDRAMKLLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYT 218
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RTG+E + + VMDG+L+ FI +YLK++ S
Sbjct: 219 MVKDHRTGYEVAQVDKVMDGDLDGFIDAYLKWRIS 253
>gi|282882039|ref|ZP_06290680.1| peptide chain release factor 2 [Peptoniphilus lacrimalis 315-B]
gi|300814941|ref|ZP_07095169.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 836
str. F0141]
gi|281298069|gb|EFA90524.1| peptide chain release factor 2 [Peptoniphilus lacrimalis 315-B]
gi|300510911|gb|EFK38183.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 836
str. F0141]
Length = 370
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 110/164 (67%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSFS +V P + + ++I +EDL+I R+ G GGQ+VN ++
Sbjct: 202 LVRISPFDANKRRHTSFSSVDVFPDIDGDID-IEIKDEDLKIDTYRSSGAGGQHVNTTDS 260
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITHIPTG+ V+C ERSQ+ N+ +A+ LKAKLL +AEE+R +I ++G+ + W
Sbjct: 261 AVRITHIPTGIVVQCQNERSQIQNRERAMQTLKAKLLALAEEERKEKIDDLQGNYSQIAW 320
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIR+YVF PY LVKD RT E D+ VMDG+L+PFI +YL+
Sbjct: 321 GSQIRSYVFQPYTLVKDHRTNCEVGDVNKVMDGDLDPFINAYLQ 364
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 80/143 (55%), Gaps = 2/143 (1%)
Query: 2 QDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALT 61
Q+ Y ++ +E A ++E+ S + L ++ EL K + +FWD+ +AQ+ ++ L
Sbjct: 3 QNIYLDKEKLENAISSLDELALSLDVNGLRDKIKELNKKQMEQNFWDDNEKAQKIIKELN 62
Query: 62 DVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLL 121
+ K+N + ++DA I+ L E D D +E +I + K + +++L LL
Sbjct: 63 SYQRKVNPYDEISDLIEDANDILLLMEMED--DYSSYDEFKKLILNIEKKVSEYKLETLL 120
Query: 122 SGPYDKEGAVISITAGAGGTDAQ 144
+G +D+ A++SI AGAGGT+AQ
Sbjct: 121 NGEFDENDAILSIHAGAGGTEAQ 143
>gi|319891756|ref|YP_004148631.1| peptide chain release factor 2 [Staphylococcus pseudintermedius
HKU10-03]
gi|386319904|ref|YP_006016067.1| peptide chain release factor 2 [Staphylococcus pseudintermedius
ED99]
gi|317161452|gb|ADV04995.1| Peptide chain release factor 2 [Staphylococcus pseudintermedius
HKU10-03]
gi|323465075|gb|ADX77228.1| peptide chain release factor 2 [Staphylococcus pseudintermedius
ED99]
Length = 329
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 104/153 (67%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P E ++V+I +D+ + RA G GGQ++NK E+A+RITH PTG+ V
Sbjct: 175 HTSFASCDVIPEFNNEKIEVEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LKAKL + EQ+ E+ IRG+ WG QIR+YVFHPY
Sbjct: 235 NNQNERSQIKNREAAMKMLKAKLYQLELEQKEQELAAIRGEQKDIGWGSQIRSYVFHPYS 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT ET ++ +VMDGE+ PFI++YL+++
Sbjct: 295 MVKDHRTNEETGNVNAVMDGEIGPFIEAYLRHQ 327
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD FWDN+ AQ + +K +N + +++ + +L +E D + ++
Sbjct: 3 ADPQFWDNQERAQTIIDQNNAIKSVVNNYYEVAETLEEMIATYELLQE--EYDDEMKDDL 60
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +DQFEL LL G +D A++ + GAGGT++Q
Sbjct: 61 EQEVIGFQTKVDQFELQLLLDGEHDANNAILELHPGAGGTESQ 103
>gi|299535985|ref|ZP_07049304.1| peptide chain release factor 2 [Lysinibacillus fusiformis ZC1]
gi|424739932|ref|ZP_18168347.1| peptide chain release factor 2 [Lysinibacillus fusiformis ZB2]
gi|298728590|gb|EFI69146.1| peptide chain release factor 2 [Lysinibacillus fusiformis ZC1]
gi|422946464|gb|EKU40873.1| peptide chain release factor 2 [Lysinibacillus fusiformis ZB2]
Length = 328
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP ++++++ I EDL+I RA G GGQ++N ++AVRITHIPTG V
Sbjct: 175 HTSFVSCDVMPEF-DDNIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTIV 233
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ+ N+ KA++ LK KL + +++ +++ +IRG+ + WG QIR+YVFHPY
Sbjct: 234 QCQAERSQIKNREKAMTMLKGKLYQLELDKQQAQLDEIRGEQKEIGWGSQIRSYVFHPYS 293
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT ET ++ +VMDG+L+PFI +YL+ K
Sbjct: 294 MVKDHRTNEETGNVGAVMDGDLDPFINAYLRSK 326
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDF-KTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+ FWD++ AQ + +K +N D +T + +T+ L EE D L +
Sbjct: 4 EPGFWDDQQGAQVIINEGNGLKAIVNEYKDLVETHENLDMTLELLREEPDEELQEELGKE 63
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ E + + FEL LLSGPYD+ A++ + GAGGT++Q
Sbjct: 64 ---LAEFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQ 103
>gi|358465478|ref|ZP_09175424.1| peptide chain release factor 2 [Streptococcus sp. oral taxon 058
str. F0407]
gi|357065599|gb|EHI75786.1| peptide chain release factor 2 [Streptococcus sp. oral taxon 058
str. F0407]
Length = 325
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ + E +S L+E+ +
Sbjct: 6 FWNDNIAAQKTSQDLNELKNTYNTFRKMEELQDEVEILFDFLTEDESVHDELVEQ----L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 TELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|154496274|ref|ZP_02034970.1| hypothetical protein BACCAP_00559 [Bacteroides capillosus ATCC
29799]
gi|150274357|gb|EDN01434.1| peptide chain release factor 2 [Pseudoflavonifractor capillosus
ATCC 29799]
Length = 373
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 105/151 (69%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EVMP LPE++ DV+I E+ E+ R+ G GGQ++NK +AVR+ H TG+ V
Sbjct: 214 QTSFAAVEVMPDLPEDA-DVEIRPEEYEMQVFRSSGAGGQHINKTSSAVRLIHHATGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ NK L L+AKL+ + +Q A ++ I+G +K EWG QIR+YVF PY+
Sbjct: 273 SCQTERSQFQNKDTCLRMLRAKLVELKMQQHAEKLSDIKGVQLKIEWGSQIRSYVFMPYQ 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD R+G ETS++ VMDG+++ FI +YLK
Sbjct: 333 LVKDNRSGFETSNVNGVMDGDIDGFINAYLK 363
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 70/127 (55%), Gaps = 2/127 (1%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
++E+ + GL+ E+EL LE ++A FW+N +AQ+ Q + + K++ +
Sbjct: 18 LDELGQALGLEAAERELEMLESESASDGFWNNLEKAQKIQQRIKQLHHKVDGQKKRLGEW 77
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
+D +T+ ++ E + D L+ E +L +++ L+ L +G YD V++I AG
Sbjct: 78 EDLLTLCEMGNEEE--DESLVPELEEGFNKLTANMEEARLSTLFTGEYDDNNVVLAIHAG 135
Query: 138 AGGTDAQ 144
AGGT+AQ
Sbjct: 136 AGGTEAQ 142
>gi|160893549|ref|ZP_02074333.1| hypothetical protein CLOL250_01103 [Clostridium sp. L2-50]
gi|156864534|gb|EDO57965.1| peptide chain release factor 2 [Clostridium sp. L2-50]
Length = 329
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 109/152 (71%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ +V+P + EE ++V I E+DL I R+ G GGQ++NK +AVRITHIPTG+ V
Sbjct: 174 QTSFASCDVIPEI-EEDLEVDINEDDLRIDTYRSSGAGGQHINKTSSAVRITHIPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK KA+ LK+KL +I +++ +I IRG+ ++ +G QIR+YV PY
Sbjct: 233 QCQNERSQHMNKDKAMQMLKSKLYLIKKQENLDKISDIRGEILENGFGSQIRSYVMQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
+VKD RTG E+ ++ +V+DGEL+ F+ +YLK+
Sbjct: 293 MVKDHRTGEESGNVAAVLDGELDGFMNAYLKW 324
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ A++ + L ++D + + D T++++ EE D+ ++EE ++
Sbjct: 6 FWDDVAKSTSVSRQLKKLQDSLEEYQKLEQDFSDIETLIQMAEE--EGDSSMIEEIGEML 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
K + + ++ LLSG +D AV+++ AGAGGT++
Sbjct: 64 TAFQKEFENYRISLLLSGEFDGYDAVMTLHAGAGGTES 101
>gi|270292341|ref|ZP_06198552.1| peptide chain release factor 2, programmed [Streptococcus sp. M143]
gi|270278320|gb|EFA24166.1| peptide chain release factor 2, programmed [Streptococcus sp. M143]
Length = 329
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V
Sbjct: 176 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 235 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 295 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E +S
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVRDE 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L+E+ + EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 LVEQ----LTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 104
>gi|310659612|ref|YP_003937333.1| PrfB [[Clostridium] sticklandii]
gi|308826390|emb|CBH22428.1| PrfB [[Clostridium] sticklandii]
Length = 328
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 161/325 (49%), Gaps = 77/325 (23%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
++ FW+ +AQ+T+Q ++DK+ +++++DA + +L +E DA L +E
Sbjct: 2 SEPEFWNEVEKAQQTMQKNKVIEDKLEQFASLESELEDAFVLFELADE----DASLEKEL 57
Query: 102 ASIIKELNKALDQFEL-----------------------------TQLLSGPYDK----- 127
S + L + +D+ ++ T++L YD+
Sbjct: 58 HSALNSLEEKIDELKIATLLSGQYDMNNAIVSIHAGSGGLDAQDWTKMLLRMYDRFAQSM 117
Query: 128 -------------EGAVISITAGAGGTDA-------------------------QTSFSG 149
E + S+T G +A TSF+
Sbjct: 118 GFRVIELDMIADPEAGIKSVTLKIEGANAYGYLKSEKGVHRIVRISPFDTSGKRHTSFAS 177
Query: 150 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 209
+V+P L ++S+++ I DL+I RA G GGQ+VNK E+A+RITH+PTG+ V+C +R
Sbjct: 178 VDVIPEL-DDSIEIDINPADLKIDTYRASGAGGQHVNKTESAIRITHLPTGIVVQCQNQR 236
Query: 210 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 269
SQ +NK A+ L AKL+ + E + +I+ ++G+ + WG QIR+YVF PY +VKD R
Sbjct: 237 SQHSNKETAMKMLMAKLIELKELEHKDKIEDLQGEYSQISWGSQIRSYVFQPYTMVKDHR 296
Query: 270 TGHETSDIVSVMDGELEPFIKSYLK 294
T E + SVMDG + PFI +YLK
Sbjct: 297 TNTEIGHVQSVMDGNIMPFINAYLK 321
>gi|331266735|ref|YP_004326365.1| peptide chain release factor 2 [Streptococcus oralis Uo5]
gi|326683407|emb|CBZ01025.1| peptide chain release factor 2 [Streptococcus oralis Uo5]
Length = 325
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E +S L+E+ +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDELVEQ----L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 TELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|322376937|ref|ZP_08051430.1| peptide chain release factor 2 [Streptococcus sp. M334]
gi|417924151|ref|ZP_12567603.1| peptide chain release factor 2 [Streptococcus mitis SK569]
gi|418967528|ref|ZP_13519191.1| peptide chain release factor 2 [Streptococcus mitis SK616]
gi|419766390|ref|ZP_14292594.1| peptide chain release factor 2 [Streptococcus mitis SK579]
gi|321282744|gb|EFX59751.1| peptide chain release factor 2 [Streptococcus sp. M334]
gi|342836205|gb|EGU70421.1| peptide chain release factor 2 [Streptococcus mitis SK569]
gi|383344141|gb|EID22311.1| peptide chain release factor 2 [Streptococcus mitis SK616]
gi|383354126|gb|EID31702.1| peptide chain release factor 2 [Streptococcus mitis SK579]
Length = 329
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V
Sbjct: 176 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 235 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 295 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E D
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DES 56
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ EE + + EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 57 VQEELVTQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 104
>gi|312862769|ref|ZP_07723009.1| peptide chain release factor 2 [Streptococcus vestibularis F0396]
gi|311101629|gb|EFQ59832.1| peptide chain release factor 2 [Streptococcus vestibularis F0396]
Length = 337
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 183 HTSFTSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 241
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 242 ASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYT 301
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RTG+E + + VMDG++E FI + LK++
Sbjct: 302 MVKDHRTGYEVAQVDKVMDGDIEGFIDACLKWR 334
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE + + FW++ AQ+T Q L ++K K + + D+ +++ EE
Sbjct: 1 MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETELYLEMLEE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
DS + EE +++L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 DDS----IQEELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 111
>gi|419814432|ref|ZP_14339220.1| peptide chain release factor 2 [Streptococcus sp. GMD2S]
gi|419817362|ref|ZP_14341526.1| peptide chain release factor 2 [Streptococcus sp. GMD4S]
gi|404466086|gb|EKA11445.1| peptide chain release factor 2 [Streptococcus sp. GMD4S]
gi|404471827|gb|EKA16298.1| peptide chain release factor 2 [Streptococcus sp. GMD2S]
Length = 325
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E +S L+E+ +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDELVEQ----L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 TELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|417092540|ref|ZP_11957156.1| peptide chain release factor 2 [Streptococcus suis R61]
gi|353532219|gb|EHC01891.1| peptide chain release factor 2 [Streptococcus suis R61]
Length = 325
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++++I ++++++ R+GG GGQNVNKV T VR+THIPTG+
Sbjct: 172 HTSFTSVEVMPEL-DDTIEIEIRDDEVKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVT 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKLLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RTG E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTGFEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ D++ ++ E D + EE +
Sbjct: 6 FWNDNLAAQKTSQELNELKNTYGNFHQMLDLYDESEILLDFLAE----DESVREELVEKL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+L+KA+ +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 ADLDKAMTAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|293365065|ref|ZP_06611782.1| peptide chain release factor RF2 [Streptococcus oralis ATCC 35037]
gi|307702226|ref|ZP_07639186.1| peptide chain release factor 2 [Streptococcus oralis ATCC 35037]
gi|291316515|gb|EFE56951.1| peptide chain release factor RF2 [Streptococcus oralis ATCC 35037]
gi|307624239|gb|EFO03216.1| peptide chain release factor 2 [Streptococcus oralis ATCC 35037]
Length = 325
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E +S L+E+ +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDELVEQ----L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+ + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 TELDMMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|118090032|ref|YP_873927.1| peptide chain release factor 2 [Streptococcus pneumoniae TIGR4]
gi|123517990|sp|Q2MGI2.1|RF2_STRPN RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|85720582|gb|ABC75805.1| peptide chain release factor 2, programmed frameshift
[Streptococcus pneumoniae TIGR4]
Length = 364
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 211 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 269
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + ++++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 270 QSTVDRTQYGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 329
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 330 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 364
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 77/138 (55%), Gaps = 4/138 (2%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+ ++A +++ R S L+ LE+E+A LE K + FW++ AQ+T Q L ++K+
Sbjct: 6 IRQKIDANREKLASFRGSLDLEGLEEEIAILENKMTEPDFWNDNIAAQKTSQELNELKNT 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
N + D+ ++ E D + +E + + EL+K + +E+T LLS PYD
Sbjct: 66 YNTFHKMEELQDEVEILLDFLAE----DESVHDELVAQLAELDKIMTSYEMTLLLSEPYD 121
Query: 127 KEGAVISITAGAGGTDAQ 144
A++ I G+GGT+AQ
Sbjct: 122 HNNAILEIHPGSGGTEAQ 139
>gi|414155903|ref|ZP_11412212.1| peptide chain release factor 2 [Streptococcus sp. F0442]
gi|410872112|gb|EKS20056.1| peptide chain release factor 2 [Streptococcus sp. F0442]
Length = 325
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V++ ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E + + VMDG+++ FI +YLK++
Sbjct: 291 MVKDHRTNYEVAQVDRVMDGDIDGFIDAYLKWR 323
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K D++ ++ E DS + EE +
Sbjct: 6 FWDDNIAAQKTSQELNELKQTYENFHQMVDLFDESEILLDFLAEDDS----VKEELIEKL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 EELDKRMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQ 100
>gi|289168241|ref|YP_003446510.1| peptide chain release factor 2 [Streptococcus mitis B6]
gi|288907808|emb|CBJ22648.1| peptide chain release factor 2 [Streptococcus mitis B6]
Length = 325
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E D + EE + +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DESVHEELVTQL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 SELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|183603302|ref|ZP_02711260.2| peptide chain release factor 2 [Streptococcus pneumoniae
CDC1087-00]
gi|183603790|ref|ZP_02721350.2| peptide chain release factor 2 [Streptococcus pneumoniae MLV-016]
gi|194397508|ref|YP_002037401.1| peptide chain release factor 2 [Streptococcus pneumoniae G54]
gi|225856431|ref|YP_002737942.1| peptide chain release factor 2 [Streptococcus pneumoniae P1031]
gi|225858565|ref|YP_002740075.1| peptide chain release factor 2 [Streptococcus pneumoniae 70585]
gi|225860729|ref|YP_002742238.1| peptide chain release factor 2 [Streptococcus pneumoniae
Taiwan19F-14]
gi|298229611|ref|ZP_06963292.1| peptide chain release factor 2 [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298255815|ref|ZP_06979401.1| peptide chain release factor 2 [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|307067358|ref|YP_003876324.1| protein chain release factor B [Streptococcus pneumoniae AP200]
gi|387787917|ref|YP_006252985.1| peptide chain release factor RF-2 [Streptococcus pneumoniae ST556]
gi|415697646|ref|ZP_11456876.1| peptide chain release factor 2 [Streptococcus pneumoniae 459-5]
gi|415749161|ref|ZP_11477105.1| peptide chain release factor 2 [Streptococcus pneumoniae SV35]
gi|415751843|ref|ZP_11478954.1| peptide chain release factor 2 [Streptococcus pneumoniae SV36]
gi|183570249|gb|EDT90777.1| peptide chain release factor 2 [Streptococcus pneumoniae
CDC1087-00]
gi|183578420|gb|EDT98948.1| peptide chain release factor 2 [Streptococcus pneumoniae MLV-016]
gi|194357175|gb|ACF55623.1| peptide chain release factor 2 [Streptococcus pneumoniae G54]
gi|225721230|gb|ACO17084.1| peptide chain release factor 2 [Streptococcus pneumoniae 70585]
gi|225726237|gb|ACO22089.1| peptide chain release factor 2 [Streptococcus pneumoniae P1031]
gi|225727373|gb|ACO23224.1| peptide chain release factor 2 [Streptococcus pneumoniae
Taiwan19F-14]
gi|306408895|gb|ADM84322.1| Protein chain release factor B [Streptococcus pneumoniae AP200]
gi|379137659|gb|AFC94450.1| peptide chain release factor RF-2 [Streptococcus pneumoniae ST556]
gi|381309539|gb|EIC50372.1| peptide chain release factor 2 [Streptococcus pneumoniae SV36]
gi|381317455|gb|EIC58180.1| peptide chain release factor 2 [Streptococcus pneumoniae SV35]
gi|381319244|gb|EIC59960.1| peptide chain release factor 2 [Streptococcus pneumoniae 459-5]
Length = 329
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 176 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + ++++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 235 QSTVDRTQYGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 295 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E D
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DES 56
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +E + + EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 57 VHDELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 104
>gi|315612838|ref|ZP_07887749.1| peptide chain release factor RF2 [Streptococcus sanguinis ATCC
49296]
gi|417916375|ref|ZP_12559957.1| peptide chain release factor 2 [Streptococcus mitis bv. 2 str.
SK95]
gi|417935343|ref|ZP_12578662.1| peptide chain release factor 2 [Streptococcus mitis bv. 2 str.
F0392]
gi|418975231|ref|ZP_13523140.1| peptide chain release factor 2 [Streptococcus oralis SK1074]
gi|419779656|ref|ZP_14305526.1| peptide chain release factor 2 [Streptococcus oralis SK10]
gi|419781250|ref|ZP_14307082.1| peptide chain release factor 2 [Streptococcus oralis SK100]
gi|419783212|ref|ZP_14309003.1| peptide chain release factor 2 [Streptococcus oralis SK610]
gi|315314948|gb|EFU62989.1| peptide chain release factor RF2 [Streptococcus sanguinis ATCC
49296]
gi|340769836|gb|EGR92354.1| peptide chain release factor 2 [Streptococcus mitis bv. 2 str.
F0392]
gi|342829817|gb|EGU64159.1| peptide chain release factor 2 [Streptococcus mitis bv. 2 str.
SK95]
gi|383182366|gb|EIC74921.1| peptide chain release factor 2 [Streptococcus oralis SK610]
gi|383184642|gb|EIC77156.1| peptide chain release factor 2 [Streptococcus oralis SK100]
gi|383186044|gb|EIC78520.1| peptide chain release factor 2 [Streptococcus oralis SK10]
gi|383348602|gb|EID26561.1| peptide chain release factor 2 [Streptococcus oralis SK1074]
Length = 329
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V
Sbjct: 176 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 235 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 295 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E +S
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDE 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L+E+ + EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 LVEQ----LTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 104
>gi|116492233|ref|YP_803968.1| peptide chain release factor 2 [Pediococcus pentosaceus ATCC 25745]
gi|116102383|gb|ABJ67526.1| bacterial peptide chain release factor 2 (bRF-2) [Pediococcus
pentosaceus ATCC 25745]
Length = 343
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 108/153 (70%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++S++V I ++DL + R+ G GGQ++NK +AVRITH+PTG+ V
Sbjct: 185 HTSFASVDVMPEL-DDSVEVNINQDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGIVV 243
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQL N+ A+S LKAKL + E+++A E +I G ++ WG QIR+YVFHPY
Sbjct: 244 ASQAERSQLQNRATAMSMLKAKLFELEEQKKAEEKAKIEGIQLEIGWGSQIRSYVFHPYS 303
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD R+ ET+++ VMDG+ + FI +YL++K
Sbjct: 304 MVKDHRSNFETANVQGVMDGDFDDFINAYLQWK 336
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Query: 38 EMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGL 97
E K A+ +FWDN+ +AQ + ++K K + + +++ +L E D D +
Sbjct: 9 EAKMAEPNFWDNQEQAQIVINENNELKQKYDNFKNLTDHVENLEVTAELLEMEDDPD--V 66
Query: 98 LEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E S + K L + L LL+G YD A+I I GAGGT++Q
Sbjct: 67 QSEFESELAATAKLLQDYRLGLLLNGKYDANNAIIEIHPGAGGTESQ 113
>gi|449923869|ref|ZP_21799269.1| peptide chain release factor 2 [Streptococcus mutans 4SM1]
gi|449163584|gb|EMB66684.1| peptide chain release factor 2 [Streptococcus mutans 4SM1]
Length = 325
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L ++++V I +ED+++ R+GG GGQNVNKV T VR+THIP+G+ V
Sbjct: 172 HTSFASVEVMPEL-NDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E S + VMDGEL+ FI ++LK++
Sbjct: 291 MVKDHRTNYEVSQVDRVMDGELDGFIDAFLKWR 323
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K K + D+ + ++ EE DS G LEE +I
Sbjct: 6 FWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEMLEEDDSL-QGELEE--DLI 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
K L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 63 K-LDKIMISYEMTLLLSEPYDANNAILEIHPGSGGTEAQ 100
>gi|307702035|ref|ZP_07639043.1| peptide chain release factor 2 [Streptococcus mitis NCTC 12261]
gi|307616680|gb|EFN95869.1| peptide chain release factor 2 [Streptococcus mitis NCTC 12261]
Length = 329
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V
Sbjct: 176 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 235 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 295 MVKDHRTNFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E +S
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHEE 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L+E+ + EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 LVEQ----LSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 104
>gi|312867359|ref|ZP_07727568.1| peptide chain release factor 2 [Streptococcus parasanguinis F0405]
gi|337282337|ref|YP_004621808.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC
15912]
gi|387879918|ref|YP_006310221.1| peptide chain release factor 2 [Streptococcus parasanguinis FW213]
gi|417917858|ref|ZP_12561416.1| peptide chain release factor 2 [Streptococcus parasanguinis SK236]
gi|419801026|ref|ZP_14326274.1| peptide chain release factor 2 [Streptococcus parasanguinis F0449]
gi|311097060|gb|EFQ55295.1| peptide chain release factor 2 [Streptococcus parasanguinis F0405]
gi|335369930|gb|AEH55880.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC
15912]
gi|342829769|gb|EGU64114.1| peptide chain release factor 2 [Streptococcus parasanguinis SK236]
gi|385693050|gb|EIG23709.1| peptide chain release factor 2 [Streptococcus parasanguinis F0449]
gi|386793368|gb|AFJ26403.1| peptide chain release factor 2 [Streptococcus parasanguinis FW213]
Length = 336
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V++ ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 183 HTSFTSVEVMPEL-DDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 241
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 242 ASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYT 301
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E + + VMDG+++ FI +YLK++
Sbjct: 302 MVKDHRTNYEVAQVDKVMDGDIDGFIDAYLKWR 334
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 4/115 (3%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+E+A LE K + FWD+ AQ+T Q L ++K D++ ++ E
Sbjct: 1 MEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMVDLFDESEILLDFLAE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
DS + EE ++EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 DDS----VKEELIEKLEELDKRMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQ 111
>gi|111658353|ref|ZP_01409041.1| hypothetical protein SpneT_02000493 [Streptococcus pneumoniae
TIGR4]
gi|148997169|ref|ZP_01824823.1| peptide chain release factor 2 [Streptococcus pneumoniae SP11-BS70]
gi|149010619|ref|ZP_01831990.1| peptide chain release factor 2 [Streptococcus pneumoniae SP19-BS75]
gi|221231551|ref|YP_002510703.1| peptide chain release factor 2 [Streptococcus pneumoniae ATCC
700669]
gi|298502540|ref|YP_003724480.1| peptide chain release factor RF2 [Streptococcus pneumoniae
TCH8431/19A]
gi|387626132|ref|YP_006062304.1| peptide chain release factor 2 [Streptococcus pneumoniae INV104]
gi|410476198|ref|YP_006742957.1| peptide chain release factor 2 [Streptococcus pneumoniae
gamPNI0373]
gi|417312326|ref|ZP_12099040.1| peptide chain release factor 2 [Streptococcus pneumoniae GA04375]
gi|417686197|ref|ZP_12335475.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41301]
gi|417693681|ref|ZP_12342870.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47901]
gi|417698178|ref|ZP_12347351.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41317]
gi|418082631|ref|ZP_12719833.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44288]
gi|418084827|ref|ZP_12722013.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47281]
gi|418093595|ref|ZP_12730724.1| peptide chain release factor 2 [Streptococcus pneumoniae GA49138]
gi|418100485|ref|ZP_12737573.1| peptide chain release factor 2 [Streptococcus pneumoniae 7286-06]
gi|418118691|ref|ZP_12755649.1| peptide chain release factor 2 [Streptococcus pneumoniae GA18523]
gi|418120832|ref|ZP_12757778.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44194]
gi|418123019|ref|ZP_12759954.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44378]
gi|418127606|ref|ZP_12764502.1| peptide chain release factor 2 [Streptococcus pneumoniae NP170]
gi|418129922|ref|ZP_12766806.1| peptide chain release factor 2 [Streptococcus pneumoniae GA07643]
gi|418136776|ref|ZP_12773619.1| peptide chain release factor 2 [Streptococcus pneumoniae GA11663]
gi|418141353|ref|ZP_12778166.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13455]
gi|418148186|ref|ZP_12784951.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13856]
gi|418150916|ref|ZP_12787663.1| peptide chain release factor 2 [Streptococcus pneumoniae GA14798]
gi|418152492|ref|ZP_12789232.1| peptide chain release factor 2 [Streptococcus pneumoniae GA16121]
gi|418164093|ref|ZP_12800767.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17371]
gi|418166368|ref|ZP_12803024.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17971]
gi|418170967|ref|ZP_12807594.1| peptide chain release factor 2 [Streptococcus pneumoniae GA19451]
gi|418177777|ref|ZP_12814361.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41565]
gi|418184521|ref|ZP_12821069.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47283]
gi|418186762|ref|ZP_12823292.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47360]
gi|418188981|ref|ZP_12825496.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47373]
gi|418195662|ref|ZP_12832142.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47688]
gi|418198264|ref|ZP_12834724.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47778]
gi|418223025|ref|ZP_12849670.1| peptide chain release factor 2 [Streptococcus pneumoniae 5185-06]
gi|418227344|ref|ZP_12853963.1| peptide chain release factor 2 [Streptococcus pneumoniae 3063-00]
gi|418229494|ref|ZP_12856101.1| peptide chain release factor 2 [Streptococcus pneumoniae EU-NP01]
gi|419424786|ref|ZP_13964986.1| peptide chain release factor 2 [Streptococcus pneumoniae 7533-05]
gi|419426911|ref|ZP_13967094.1| peptide chain release factor 2 [Streptococcus pneumoniae 5652-06]
gi|419429012|ref|ZP_13969181.1| peptide chain release factor 2 [Streptococcus pneumoniae GA11856]
gi|419435630|ref|ZP_13975725.1| peptide chain release factor 2 [Streptococcus pneumoniae 8190-05]
gi|419437712|ref|ZP_13977784.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13499]
gi|419442245|ref|ZP_13982276.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13224]
gi|419444366|ref|ZP_13984381.1| peptide chain release factor 2 [Streptococcus pneumoniae GA19923]
gi|419446494|ref|ZP_13986499.1| peptide chain release factor 2 [Streptococcus pneumoniae 7879-04]
gi|419449057|ref|ZP_13989054.1| peptide chain release factor 2 [Streptococcus pneumoniae 4075-00]
gi|419450729|ref|ZP_13990716.1| peptide chain release factor 2 [Streptococcus pneumoniae EU-NP02]
gi|419452827|ref|ZP_13992801.1| peptide chain release factor 2 [Streptococcus pneumoniae EU-NP03]
gi|419470717|ref|ZP_14010576.1| peptide chain release factor 2 [Streptococcus pneumoniae GA07914]
gi|419472809|ref|ZP_14012660.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13430]
gi|419477420|ref|ZP_14017245.1| peptide chain release factor 2 [Streptococcus pneumoniae GA18068]
gi|419481778|ref|ZP_14021572.1| peptide chain release factor 2 [Streptococcus pneumoniae GA40563]
gi|419490684|ref|ZP_14030424.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47179]
gi|419492902|ref|ZP_14032629.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47210]
gi|419501494|ref|ZP_14041180.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47628]
gi|419503566|ref|ZP_14043237.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47760]
gi|419505698|ref|ZP_14045359.1| peptide chain release factor 2 [Streptococcus pneumoniae GA49194]
gi|419510084|ref|ZP_14049728.1| peptide chain release factor 2 [Streptococcus pneumoniae NP141]
gi|419518559|ref|ZP_14058166.1| peptide chain release factor 2 [Streptococcus pneumoniae GA08825]
gi|419520694|ref|ZP_14060291.1| peptide chain release factor 2 [Streptococcus pneumoniae GA05245]
gi|419527591|ref|ZP_14067135.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17719]
gi|419529791|ref|ZP_14069322.1| peptide chain release factor 2 [Streptococcus pneumoniae GA40028]
gi|419531992|ref|ZP_14071510.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47794]
gi|421208585|ref|ZP_15665610.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070005]
gi|421212755|ref|ZP_15669717.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070108]
gi|421214943|ref|ZP_15671874.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070109]
gi|421224608|ref|ZP_15681354.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070768]
gi|421233754|ref|ZP_15690376.1| peptide chain release factor 2 [Streptococcus pneumoniae 2061617]
gi|421238390|ref|ZP_15694959.1| peptide chain release factor 2 [Streptococcus pneumoniae 2071247]
gi|421242747|ref|ZP_15699269.1| peptide chain release factor 2 [Streptococcus pneumoniae 2081074]
gi|421244584|ref|ZP_15701087.1| peptide chain release factor 2 [Streptococcus pneumoniae 2081685]
gi|421247010|ref|ZP_15703497.1| peptide chain release factor 2 [Streptococcus pneumoniae 2082170]
gi|421249058|ref|ZP_15705521.1| peptide chain release factor 2 [Streptococcus pneumoniae 2082239]
gi|421270178|ref|ZP_15721035.1| peptide chain release factor 2 [Streptococcus pneumoniae SPAR48]
gi|421274666|ref|ZP_15725498.1| peptide chain release factor 2 [Streptococcus pneumoniae GA52612]
gi|421287242|ref|ZP_15738008.1| peptide chain release factor 2 [Streptococcus pneumoniae GA58771]
gi|421289397|ref|ZP_15740149.1| peptide chain release factor 2 [Streptococcus pneumoniae GA54354]
gi|421304717|ref|ZP_15755373.1| peptide chain release factor 2 [Streptococcus pneumoniae GA62331]
gi|421313930|ref|ZP_15764520.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47562]
gi|444383948|ref|ZP_21182121.1| peptide chain release factor 2 [Streptococcus pneumoniae PCS8106]
gi|444385510|ref|ZP_21183583.1| peptide chain release factor 2 [Streptococcus pneumoniae PCS8203]
gi|444387425|ref|ZP_21185447.1| peptide chain release factor 2 [Streptococcus pneumoniae PCS125219]
gi|444390125|ref|ZP_21188040.1| peptide chain release factor 2 [Streptococcus pneumoniae PCS70012]
gi|444393053|ref|ZP_21190713.1| peptide chain release factor 2 [Streptococcus pneumoniae PCS81218]
gi|444394242|ref|ZP_21191795.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0002]
gi|444397193|ref|ZP_21194680.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0006]
gi|444400046|ref|ZP_21197469.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0007]
gi|444401586|ref|ZP_21198770.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0008]
gi|444405284|ref|ZP_21202197.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0009]
gi|444408868|ref|ZP_21205498.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0010]
gi|444410182|ref|ZP_21206730.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0076]
gi|444411908|ref|ZP_21208234.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0153]
gi|444415014|ref|ZP_21211261.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0199]
gi|444416749|ref|ZP_21212828.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0360]
gi|444419286|ref|ZP_21215159.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0427]
gi|444422599|ref|ZP_21218248.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0446]
gi|147756869|gb|EDK63909.1| peptide chain release factor 2 [Streptococcus pneumoniae SP11-BS70]
gi|147765100|gb|EDK72029.1| peptide chain release factor 2 [Streptococcus pneumoniae SP19-BS75]
gi|220674011|emb|CAR68524.1| peptide chain release factor 2 [Streptococcus pneumoniae ATCC
700669]
gi|298238135|gb|ADI69266.1| peptide chain release factor RF2 [Streptococcus pneumoniae
TCH8431/19A]
gi|301793914|emb|CBW36310.1| peptide chain release factor 2 [Streptococcus pneumoniae INV104]
gi|327390112|gb|EGE88455.1| peptide chain release factor 2 [Streptococcus pneumoniae GA04375]
gi|332076034|gb|EGI86500.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41301]
gi|332202619|gb|EGJ16688.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41317]
gi|332204764|gb|EGJ18829.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47901]
gi|353758068|gb|EHD38661.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44288]
gi|353760062|gb|EHD40644.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47281]
gi|353765471|gb|EHD46013.1| peptide chain release factor 2 [Streptococcus pneumoniae GA49138]
gi|353773194|gb|EHD53693.1| peptide chain release factor 2 [Streptococcus pneumoniae 7286-06]
gi|353791392|gb|EHD71770.1| peptide chain release factor 2 [Streptococcus pneumoniae GA18523]
gi|353793659|gb|EHD74018.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44194]
gi|353798492|gb|EHD78822.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44378]
gi|353800067|gb|EHD80381.1| peptide chain release factor 2 [Streptococcus pneumoniae NP170]
gi|353803214|gb|EHD83506.1| peptide chain release factor 2 [Streptococcus pneumoniae GA07643]
gi|353805604|gb|EHD85878.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13455]
gi|353812861|gb|EHD93094.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13856]
gi|353814799|gb|EHD95022.1| peptide chain release factor 2 [Streptococcus pneumoniae GA14798]
gi|353819137|gb|EHD99335.1| peptide chain release factor 2 [Streptococcus pneumoniae GA16121]
gi|353829964|gb|EHE10094.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17971]
gi|353832420|gb|EHE12538.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17371]
gi|353837137|gb|EHE17223.1| peptide chain release factor 2 [Streptococcus pneumoniae GA19451]
gi|353844551|gb|EHE24594.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41565]
gi|353852119|gb|EHE32109.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47283]
gi|353853348|gb|EHE33331.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47360]
gi|353856123|gb|EHE36092.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47373]
gi|353862189|gb|EHE42122.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47688]
gi|353862902|gb|EHE42832.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47778]
gi|353880297|gb|EHE60113.1| peptide chain release factor 2 [Streptococcus pneumoniae 5185-06]
gi|353882945|gb|EHE62754.1| peptide chain release factor 2 [Streptococcus pneumoniae 3063-00]
gi|353889680|gb|EHE69448.1| peptide chain release factor 2 [Streptococcus pneumoniae EU-NP01]
gi|353902704|gb|EHE78232.1| peptide chain release factor 2 [Streptococcus pneumoniae GA11663]
gi|379540166|gb|EHZ05340.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13499]
gi|379540597|gb|EHZ05769.1| peptide chain release factor 2 [Streptococcus pneumoniae GA05245]
gi|379545433|gb|EHZ10572.1| peptide chain release factor 2 [Streptococcus pneumoniae GA07914]
gi|379552272|gb|EHZ17362.1| peptide chain release factor 2 [Streptococcus pneumoniae GA11856]
gi|379552316|gb|EHZ17405.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13430]
gi|379554212|gb|EHZ19292.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13224]
gi|379566536|gb|EHZ31524.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17719]
gi|379566802|gb|EHZ31789.1| peptide chain release factor 2 [Streptococcus pneumoniae GA18068]
gi|379572059|gb|EHZ37016.1| peptide chain release factor 2 [Streptococcus pneumoniae GA19923]
gi|379574531|gb|EHZ39469.1| peptide chain release factor 2 [Streptococcus pneumoniae GA40028]
gi|379581457|gb|EHZ46342.1| peptide chain release factor 2 [Streptococcus pneumoniae GA40563]
gi|379594263|gb|EHZ59073.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47179]
gi|379594940|gb|EHZ59749.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47210]
gi|379601855|gb|EHZ66627.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47628]
gi|379607612|gb|EHZ72358.1| peptide chain release factor 2 [Streptococcus pneumoniae GA49194]
gi|379608748|gb|EHZ73493.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47794]
gi|379609164|gb|EHZ73905.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47760]
gi|379614034|gb|EHZ78744.1| peptide chain release factor 2 [Streptococcus pneumoniae 7879-04]
gi|379616407|gb|EHZ81103.1| peptide chain release factor 2 [Streptococcus pneumoniae 8190-05]
gi|379618364|gb|EHZ83039.1| peptide chain release factor 2 [Streptococcus pneumoniae 5652-06]
gi|379620441|gb|EHZ85097.1| peptide chain release factor 2 [Streptococcus pneumoniae 7533-05]
gi|379624115|gb|EHZ88748.1| peptide chain release factor 2 [Streptococcus pneumoniae 4075-00]
gi|379624628|gb|EHZ89259.1| peptide chain release factor 2 [Streptococcus pneumoniae EU-NP02]
gi|379627411|gb|EHZ92023.1| peptide chain release factor 2 [Streptococcus pneumoniae EU-NP03]
gi|379633277|gb|EHZ97846.1| peptide chain release factor 2 [Streptococcus pneumoniae NP141]
gi|379641538|gb|EIA06073.1| peptide chain release factor 2 [Streptococcus pneumoniae GA08825]
gi|395577055|gb|EJG37609.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070005]
gi|395581162|gb|EJG41635.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070108]
gi|395582502|gb|EJG42964.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070109]
gi|395591944|gb|EJG52239.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070768]
gi|395602651|gb|EJG62793.1| peptide chain release factor 2 [Streptococcus pneumoniae 2061617]
gi|395602977|gb|EJG63118.1| peptide chain release factor 2 [Streptococcus pneumoniae 2071247]
gi|395610067|gb|EJG70148.1| peptide chain release factor 2 [Streptococcus pneumoniae 2081074]
gi|395610242|gb|EJG70321.1| peptide chain release factor 2 [Streptococcus pneumoniae 2081685]
gi|395614646|gb|EJG74664.1| peptide chain release factor 2 [Streptococcus pneumoniae 2082170]
gi|395615687|gb|EJG75703.1| peptide chain release factor 2 [Streptococcus pneumoniae 2082239]
gi|395870830|gb|EJG81943.1| peptide chain release factor 2 [Streptococcus pneumoniae SPAR48]
gi|395875394|gb|EJG86475.1| peptide chain release factor 2 [Streptococcus pneumoniae GA52612]
gi|395889651|gb|EJH00658.1| peptide chain release factor 2 [Streptococcus pneumoniae GA58771]
gi|395890657|gb|EJH01663.1| peptide chain release factor 2 [Streptococcus pneumoniae GA54354]
gi|395905379|gb|EJH16284.1| peptide chain release factor 2 [Streptococcus pneumoniae GA62331]
gi|395914430|gb|EJH25274.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47562]
gi|406369143|gb|AFS42833.1| peptide chain release factor 2 [Streptococcus pneumoniae
gamPNI0373]
gi|444247868|gb|ELU54395.1| peptide chain release factor 2 [Streptococcus pneumoniae PCS8106]
gi|444250112|gb|ELU56596.1| peptide chain release factor 2 [Streptococcus pneumoniae PCS8203]
gi|444253299|gb|ELU59757.1| peptide chain release factor 2 [Streptococcus pneumoniae PCS125219]
gi|444256588|gb|ELU62926.1| peptide chain release factor 2 [Streptococcus pneumoniae PCS70012]
gi|444261309|gb|ELU67613.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0002]
gi|444262424|gb|ELU68722.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0006]
gi|444262499|gb|ELU68795.1| peptide chain release factor 2 [Streptococcus pneumoniae PCS81218]
gi|444267432|gb|ELU73335.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0007]
gi|444267910|gb|ELU73793.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0008]
gi|444269162|gb|ELU74977.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0010]
gi|444274647|gb|ELU80292.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0009]
gi|444275240|gb|ELU80867.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0153]
gi|444278113|gb|ELU83589.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0076]
gi|444280814|gb|ELU86165.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0199]
gi|444285218|gb|ELU90299.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0360]
gi|444287129|gb|ELU92070.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0427]
gi|444288027|gb|ELU92930.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0446]
Length = 325
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + ++++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E D + +E + +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DESVHDELVAQL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 AELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|306829186|ref|ZP_07462376.1| peptide chain release factor RF2 [Streptococcus mitis ATCC 6249]
gi|304428272|gb|EFM31362.1| peptide chain release factor RF2 [Streptococcus mitis ATCC 6249]
Length = 325
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E +S L+E+ +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFCKMEELQDEVEILLDFLAEDESVHDELVEQ----L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 TELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|331270416|ref|YP_004396908.1| peptide chain release factor 2 [Clostridium botulinum BKT015925]
gi|329126966|gb|AEB76911.1| peptide chain release factor 2 [Clostridium botulinum BKT015925]
Length = 327
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 167/326 (51%), Gaps = 79/326 (24%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT--EEMDSTDAGLLEE 100
+S+FWD+ +AQE Q +KD+I+ ++ K +++D +++++ E+ +S+ +L E
Sbjct: 3 ESNFWDDINKAQEVTQEAKGLKDRIDKYSNTKNRLEDLKILIEMSIEEDDESSVEEILNE 62
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ---------------T 145
+KE+ +D+F + LLSG YDK A++S+ AGAGGTDAQ T
Sbjct: 63 ----VKEIQIIIDEFRVQILLSGEYDKNNAIVSLHAGAGGTDAQDWTEMLLRMYTRWSET 118
Query: 146 SFSGAEVMPLLPEESMDVQ----------------------------------------- 164
E + +LP + ++
Sbjct: 119 KGYKVETLDILPGDEAGIKSASLKITGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFA 178
Query: 165 ----IPE----EDLEI--------SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEE 208
+PE +D+EI ++ +G G Q++NK ++AVRITHIPTG+ V+ E
Sbjct: 179 SLEILPELTESQDIEIKSDDLRIDTYRASGAGG-QHINKTDSAVRITHIPTGIVVQSQSE 237
Query: 209 RSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDV 268
RSQ NK A+S LK+KL+ + E +I+ + GD + WG QIR+YVF PY +VKD
Sbjct: 238 RSQFQNKDTAMSMLKSKLVELKERAHKEKIEDLSGDLKEIGWGSQIRSYVFQPYTMVKDH 297
Query: 269 RTGHETSDIVSVMDGELEPFIKSYLK 294
RT E ++ +VMDG+++ FI YLK
Sbjct: 298 RTNTEMGNVEAVMDGDIDIFIIEYLK 323
>gi|319946614|ref|ZP_08020848.1| peptide chain release factor RF2 [Streptococcus australis ATCC
700641]
gi|417920780|ref|ZP_12564279.1| peptide chain release factor 2 [Streptococcus australis ATCC
700641]
gi|319746662|gb|EFV98921.1| peptide chain release factor RF2 [Streptococcus australis ATCC
700641]
gi|342827904|gb|EGU62284.1| peptide chain release factor 2 [Streptococcus australis ATCC
700641]
Length = 325
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V++ ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E + + VMDG+++ FI +YLK++
Sbjct: 291 MVKDHRTSYEVAQVDKVMDGDIDGFIDAYLKWR 323
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K D++ +++ E D + EE +
Sbjct: 6 FWDDNIAAQKTSQELNELKQTYENFHQMTDLFDESEILLEFLSE----DESVHEELEEKL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 IELDKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQ 100
>gi|126652452|ref|ZP_01724624.1| peptide chain release factor 2 [Bacillus sp. B14905]
gi|126590723|gb|EAZ84838.1| peptide chain release factor 2 [Bacillus sp. B14905]
Length = 328
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP +E++++ I EDL+I RA G GGQ++N ++AVRITHIPTG V
Sbjct: 175 HTSFVSCDVMPEF-DENIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTVV 233
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ+ N+ KA++ LK KL + E++ +++ +IRG+ WG QIR+YVFHPY
Sbjct: 234 QCQAERSQIKNREKAMAMLKGKLYQLELEKQQAQLDEIRGEQKDIGWGSQIRSYVFHPYS 293
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDG+++PFI +YL+
Sbjct: 294 MVKDHRTNEETGNVGAVMDGDVDPFINAYLR 324
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 107 ELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E + + FEL LLSGPYD+ A++ + GAGGT++Q
Sbjct: 66 EFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQ 103
>gi|402299802|ref|ZP_10819375.1| peptide chain release factor 2 [Bacillus alcalophilus ATCC 27647]
gi|401725048|gb|EJS98362.1| peptide chain release factor 2 [Bacillus alcalophilus ATCC 27647]
Length = 328
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP L +++++++I EDL+I RA G GGQ++N ++AVRITH+PT V
Sbjct: 174 HTSFVSCEVMPEL-DDTVEIEINTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ +KAKL + E++ E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQSERSQIKNRDQAMKMMKAKLYQLRIEEQQRELDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT HE+ + +VMDGEL+ FI +YL+
Sbjct: 293 LVKDHRTNHESGNTNAVMDGELDGFIDAYLR 323
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
D FW+N+ AQ + +K+++N + + +D +L +E D D L E
Sbjct: 2 TDPDFWNNQERAQTVINESNALKEQVNTFLKLEGEYEDLEVSYELVKEEDDED--LAAEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +K L + ++ FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 FTGVKSLTEQMNAFELQLLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|290968807|ref|ZP_06560344.1| peptide chain release factor 2 [Megasphaera genomosp. type_1 str.
28L]
gi|290781103|gb|EFD93694.1| peptide chain release factor 2 [Megasphaera genomosp. type_1 str.
28L]
Length = 352
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 113/175 (64%), Gaps = 1/175 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ +VMP LP++ +DV+I +++ + + RA G GGQ+VNK +
Sbjct: 175 LVRISPFDAAARRHTSFTAVDVMPELPDD-VDVKINMDEVRVDYFRASGAGGQHVNKTSS 233
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVR+TH+PTG+ V+C ERSQL NK L L+AKL + EE++A +I G EW
Sbjct: 234 AVRMTHLPTGIVVQCQNERSQLQNKEMCLKYLRAKLFELEEEKKAQLKAEIGGTHQAIEW 293
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASD 305
G QIR+YVFHPY LVKD RT ET + +VMDGEL+ FI+ +L+ + + + D
Sbjct: 294 GSQIRSYVFHPYNLVKDHRTDVETGNTQAVMDGELDKFIEGFLQREKNRKTAGQD 348
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
E+ + +L+++ +D FW++ A+ Q T +K+++ ++ D ++L M
Sbjct: 5 EERIMDLDIQMSDPDFWNHPDTARRISQEATALKEEVQGHRALMEQVADLREYLELA--M 62
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ D L + + L +++ E+ LLSG YD+ A+++ AGAGGT+AQ
Sbjct: 63 EEKDTSLTADIEKQYEALAGEVEKREIRLLLSGEYDRCNAIVTFHAGAGGTEAQ 116
>gi|168213727|ref|ZP_02639352.1| peptide chain release factor 2 [Clostridium perfringens CPE str.
F4969]
gi|170714817|gb|EDT26999.1| peptide chain release factor 2 [Clostridium perfringens CPE str.
F4969]
Length = 323
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 103/150 (68%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P L + D++I DL I RAGG GGQ+VNK E+AVRITHIPTG+ V
Sbjct: 173 QTSFASVEVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVV 231
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ +N+ A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY
Sbjct: 232 QCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYS 291
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD RT ETS++ VMDG+++ FI +YL
Sbjct: 292 MVKDHRTNVETSNVNGVMDGDIDNFIIAYL 321
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
++ FWD+ +AQE Q VKDKI+ + ++DD + +L EE D A +E
Sbjct: 3 EAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETA---KEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +K L+K +D ++ +LSG YD+ A++++ G GG+DA
Sbjct: 60 NEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDAN 101
>gi|417848117|ref|ZP_12494069.1| peptide chain release factor 2 [Streptococcus mitis SK1073]
gi|339455142|gb|EGP67750.1| peptide chain release factor 2 [Streptococcus mitis SK1073]
Length = 329
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V
Sbjct: 176 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 235 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 295 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E +S
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHEE 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L+E+ + EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 LVEQ----LSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 104
>gi|417936704|ref|ZP_12580011.1| peptide chain release factor 2 [Streptococcus infantis X]
gi|417937756|ref|ZP_12581056.1| peptide chain release factor 2 [Streptococcus infantis SK970]
gi|419844279|ref|ZP_14367575.1| peptide chain release factor 2 [Streptococcus infantis ATCC 700779]
gi|343392020|gb|EGV04593.1| peptide chain release factor 2 [Streptococcus infantis SK970]
gi|343400220|gb|EGV12740.1| peptide chain release factor 2 [Streptococcus infantis X]
gi|385701994|gb|EIG39148.1| peptide chain release factor 2 [Streptococcus infantis ATCC 700779]
Length = 329
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 176 HTSFTSVEVMPEL-DDTIEVDIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 235 ASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 295 MVKDHRTNFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N KMD+ V++ + + D
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFH----KMDELQDEVEILLDFLAEDES 56
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +E + EL++ + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 57 VKDELVEKLSELDQMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 104
>gi|307689287|ref|ZP_07631733.1| peptide chain release factor 2 [Clostridium cellulovorans 743B]
Length = 329
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 103/150 (68%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV P L ++ +V+I DL++ RA G GGQ+VNK E+A+RITHIPTG+ V
Sbjct: 174 QTSFASLEVTPELRQDQ-NVEINPSDLKVDTYRASGAGGQHVNKTESAIRITHIPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ+ N+ AL+ LK+KL+ + E +I+ + GD WG QIR+YVFHPY
Sbjct: 233 QCQNERSQIQNRETALNMLKSKLVELKERAHKEKIEDLTGDLKDMGWGSQIRSYVFHPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD RT + +D+ VMDGEL+ FIK YL
Sbjct: 293 MVKDHRTNIQVNDVYKVMDGELDVFIKGYL 322
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+S FWDN AQ +KD+I+L +F++ ++D ++++ ++ D+ L+ E
Sbjct: 3 ESGFWDNLERAQSVTARAKGIKDRIDLYNNFQSSVEDIKVLIEMA--IEENDSSLVTEVY 60
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+ I L+ +++ L +LSG YD A++++ +G GGTDA
Sbjct: 61 NEISTLSDSVENLRLELMLSGEYDTNNAIVTLHSGVGGTDA 101
>gi|187734757|ref|YP_001876869.1| peptide chain release factor 2 [Akkermansia muciniphila ATCC
BAA-835]
gi|187424809|gb|ACD04088.1| peptide chain release factor 2 [Akkermansia muciniphila ATCC
BAA-835]
Length = 329
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 110/151 (72%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ + P + +S++++I ++DL++ R+GGKGGQNVNKVETAVRITHIP+GV V
Sbjct: 174 HTSFASLDATPEV-SDSINIEILDKDLKVDTYRSGGKGGQNVNKVETAVRITHIPSGVIV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQL NK +A++ L+AKL I E+++ +E + + WG QIR+YVF PY+
Sbjct: 233 ACQNERSQLRNKEEAMNMLRAKLYQIEEDKKQAEADRQYSEKGDIGWGNQIRSYVFQPYQ 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RTG E+ +I VMDG L+PFI++ L+
Sbjct: 293 MVKDLRTGVESGNIQDVMDGNLDPFIEAMLR 323
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M A D FWD++ A+ + + +K ++ + K++++D ++L +E D D G
Sbjct: 1 MSAPD--FWDDQNAARALMAEVNPLKHRMEAFSALKSRLEDIDAAIELAQEADDDDLG-- 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
EA K+L FEL LL+GP D+ ++I AGAGGT+A
Sbjct: 57 REAVEEFARWQKSLADFELLTLLNGPQDQASCYVTIHAGAGGTEA 101
>gi|168205594|ref|ZP_02631599.1| peptide chain release factor 2 [Clostridium perfringens E str.
JGS1987]
gi|169344216|ref|ZP_02865198.1| peptide chain release factor 2 [Clostridium perfringens C str.
JGS1495]
gi|422346837|ref|ZP_16427751.1| peptide chain release factor 2 [Clostridium perfringens WAL-14572]
gi|169297675|gb|EDS79775.1| peptide chain release factor 2 [Clostridium perfringens C str.
JGS1495]
gi|170662903|gb|EDT15586.1| peptide chain release factor 2 [Clostridium perfringens E str.
JGS1987]
gi|373225670|gb|EHP48001.1| peptide chain release factor 2 [Clostridium perfringens WAL-14572]
Length = 323
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 103/150 (68%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P L + D++I DL I RAGG GGQ+VNK E+AVRITHIPTG+ V
Sbjct: 173 QTSFASVEVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVV 231
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ +N+ A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY
Sbjct: 232 QCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYS 291
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD RT ETS++ VMDG+++ FI +YL
Sbjct: 292 MVKDHRTNVETSNVNGVMDGDIDNFIIAYL 321
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
++ FWD+ +AQE Q VKDKI+ + ++DD + +L EE D A +E
Sbjct: 3 EAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETA---KEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S +K L+K +D ++ +LSG YD+ A++++ G GG+DA
Sbjct: 60 SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDAN 101
>gi|424780263|ref|ZP_18207143.1| Peptide chain release factor 2 [Catellicoccus marimammalium
M35/04/3]
gi|422843221|gb|EKU27662.1| Peptide chain release factor 2 [Catellicoccus marimammalium
M35/04/3]
Length = 327
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 111/164 (67%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ EVMP + E+ +D++I +EDL+I RA G GGQ++NK E+
Sbjct: 159 LVRISPFDAANRRHTSFASVEVMPEINED-IDIEIKDEDLKIDTYRASGAGGQHINKTES 217
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PTG+ V +RSQL N+ A++ LKAKL E++A E +RG+ ++ W
Sbjct: 218 AVRITHLPTGIVVASQAQRSQLKNREIAMNMLKAKLYQKEMEKKAEEQAALRGEQMENGW 277
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIR+YVFHPY +VKD RT HET + +VMDG+L+ F+ YL+
Sbjct: 278 GSQIRSYVFHPYTMVKDHRTQHETGNGQAVMDGDLDAFMNEYLR 321
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M A D FWD+ A++ + + K ++ + + ++ +V+L E TDA
Sbjct: 1 MSAPD--FWDDAERARKIIAEVNLAKKQLETFQSLEQQQEELEMMVELAE----TDADFQ 54
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+E + + + L +EL QLL PYD A++ I GAGGT++Q
Sbjct: 55 QELEEQLPQFEEQLGAYELEQLLDDPYDHNNALLEIHPGAGGTESQ 100
>gi|421276644|ref|ZP_15727465.1| peptide chain release factor 2 [Streptococcus mitis SPAR10]
gi|395876850|gb|EJG87922.1| peptide chain release factor 2 [Streptococcus mitis SPAR10]
Length = 325
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVDIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTNFEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N KMD+ V++ + + D + +E +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFH----KMDELQDEVEILLDFLAEDESVKDELVEKL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL++ + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 DELDQMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|335048924|ref|ZP_08541936.1| peptide chain release factor 2 [Megasphaera sp. UPII 199-6]
gi|333764707|gb|EGL42093.1| peptide chain release factor 2 [Megasphaera sp. UPII 199-6]
Length = 344
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 105/151 (69%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP LP++ +DV+I +++ + + RA G GGQ+VNK +AVR+TH+PTG+ V
Sbjct: 180 HTSFTAVDVMPELPDD-VDVKINMDEVRVDYFRASGAGGQHVNKTSSAVRMTHLPTGIVV 238
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL NK L L+AKL + EE++A +I G EWG QIR+YVFHPY
Sbjct: 239 QCQNERSQLQNKEMCLKYLRAKLFELEEEKKAQLKAEIGGTHQAIEWGSQIRSYVFHPYN 298
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT ET + +VMDGEL+ FI+ +L+
Sbjct: 299 LVKDHRTDVETGNTQAVMDGELDKFIEGFLQ 329
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+L+++ +D FW++ A+ Q T +K+++ ++ D ++L M+ D
Sbjct: 2 DLDIQMSDPDFWNHPDTARRISQEATALKEEVQGHRALMEQVADLREYLELA--MEEKDT 59
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L + + L +++ E+ LLSG YD+ A+++ AGAGGT+AQ
Sbjct: 60 SLTADIEKQYEALAGEVEKREIRLLLSGEYDRCNAIVTFHAGAGGTEAQ 108
>gi|418075863|ref|ZP_12713102.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47502]
gi|353749652|gb|EHD30295.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47502]
Length = 325
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + ++++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N KM++ V++ + + D + +E + +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFH----KMEELQGEVEILLDFLAEDESVHDELVAQL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 AELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|115311855|sp|Q49VV3.2|RF2_STAS1 RecName: Full=Peptide chain release factor 2; Short=RF-2
Length = 373
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 172/358 (48%), Gaps = 70/358 (19%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
++++++ ++++E++R S L+ E + E E D +FWDN+ +AQ+ + +K
Sbjct: 6 IKRNIDTYNEKLEQLRGSLDLEAKETNIQEYEEMMTDPTFWDNQEKAQDVIDKNNALKSV 65
Query: 67 INL-------LTDFKT-------------KMDDAVTIVKLTEEMDSTDAGLL----EEAA 102
+N L D T K D ++ E+D + LL +A
Sbjct: 66 VNAYRTLESELEDMDTTRALLLEEDDETMKQDLEQSVQDFKNELDQFELQLLLDGPYDAN 125
Query: 103 SIIKELNKALDQFE---LTQLLSGPYDK------------------EGAVISITAGAGGT 141
+ I EL+ E T +L Y + E V S+T G
Sbjct: 126 NAIMELHPGAGGTESQDWTNMLLRMYQRYCEQKGFNVEIADYLPGDEAGVKSVTLIVKGH 185
Query: 142 DA-------------------------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSR 176
+A TSF+ +V+P +++ I +D+ + R
Sbjct: 186 NAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPQFNNTEIEIDINPDDITVDTFR 245
Query: 177 AGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRAS 236
A G GGQ++NK E+A+RITH PTG+ V ERSQ+ N+ A+ LK+KL + E++
Sbjct: 246 ASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKTLKSKLYQLKIEEQEQ 305
Query: 237 EIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
E+ +IRG+ + WG QIR+YVFHPY +VKD RT ET + +VMDG++ PFI+++L+
Sbjct: 306 EMAEIRGEQKEIGWGSQIRSYVFHPYAMVKDHRTNEETGKVDAVMDGDIGPFIEAFLR 363
>gi|291531340|emb|CBK96925.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
siraeum 70/3]
Length = 370
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 105/151 (69%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP + E+ +D++I E+++++ RA G GGQ VNK +AVRITHIPTG+
Sbjct: 214 HTSFASVEVMPEINED-IDIEISEDEIKMDVYRASGAGGQKVNKTSSAVRITHIPTGIVC 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ N+ A+ LK+KLL I E + +I I+G+ ++ WG QIR+YVF PY
Sbjct: 273 ACQTERSQHQNREYAMRMLKSKLLEIKEREHLDKISDIKGEQLQIAWGAQIRSYVFMPYT 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RTG+E +I +VMDG+L+ FI +YLK
Sbjct: 333 MVKDHRTGYEMGNIGAVMDGDLDGFINAYLK 363
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 78/144 (54%), Gaps = 2/144 (1%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M ++ L+ + E ++E+ + L L+ E+A+LE ++A FW++ +Q+ Q +
Sbjct: 1 MLEYDELKVEFEGYEPELKELAGALDLDNLKTEIAKLEEQSAQPDFWNDVENSQKISQKI 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+ K+ + + DD +T+++L +E D D +L E + K L+ +L L
Sbjct: 61 GEDKNIVQSYEKLRESYDDVMTMLELAQEED--DESMLPEIQELAKHFRTELESQKLATL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
LSG +D A+++ AGAGGT+AQ
Sbjct: 119 LSGEFDHNNAILTFHAGAGGTEAQ 142
>gi|183603122|ref|ZP_02712622.2| peptide chain release factor 2 [Streptococcus pneumoniae SP195]
gi|183573173|gb|EDT93701.1| peptide chain release factor 2 [Streptococcus pneumoniae SP195]
Length = 329
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 114/155 (73%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+T+IPTG+ V
Sbjct: 176 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 235 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +E + + VMDG+L+ FI +YLK++ S
Sbjct: 295 MVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWRIS 329
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+ Q L ++K+ N + D+ ++ E D
Sbjct: 1 MENKMTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DES 56
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +E + + EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 57 VHDELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 104
>gi|148992417|ref|ZP_01822112.1| peptide chain release factor 2 [Streptococcus pneumoniae SP9-BS68]
gi|417678740|ref|ZP_12328137.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17570]
gi|418233946|ref|ZP_12860526.1| peptide chain release factor 2 [Streptococcus pneumoniae GA08780]
gi|419507820|ref|ZP_14047474.1| peptide chain release factor 2 [Streptococcus pneumoniae GA49542]
gi|421219939|ref|ZP_15676794.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070425]
gi|421222270|ref|ZP_15679064.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070531]
gi|421278520|ref|ZP_15729330.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17301]
gi|421293665|ref|ZP_15744389.1| peptide chain release factor 2 [Streptococcus pneumoniae GA56113]
gi|147928734|gb|EDK79747.1| peptide chain release factor 2 [Streptococcus pneumoniae SP9-BS68]
gi|332073119|gb|EGI83598.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17570]
gi|353889385|gb|EHE69156.1| peptide chain release factor 2 [Streptococcus pneumoniae GA08780]
gi|379612665|gb|EHZ77382.1| peptide chain release factor 2 [Streptococcus pneumoniae GA49542]
gi|395589594|gb|EJG49912.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070531]
gi|395590014|gb|EJG50329.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070425]
gi|395881892|gb|EJG92940.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17301]
gi|395894997|gb|EJH05973.1| peptide chain release factor 2 [Streptococcus pneumoniae GA56113]
Length = 325
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 114/155 (73%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+T+IPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+ Q L ++K+ N + D+ ++ E D + +E + +
Sbjct: 6 FWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DESVHDELVAQL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 AELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|348027317|ref|YP_004767122.1| peptide chain release factor 2 [Megasphaera elsdenii DSM 20460]
gi|341823371|emb|CCC74295.1| peptide chain release factor 2 [Megasphaera elsdenii DSM 20460]
Length = 337
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 109/164 (66%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ +VMP LP++ +DV+I +D+ + + RA G GGQ+VNK +
Sbjct: 163 LVRISPFDAAARRHTSFTAVDVMPELPDD-VDVEINMDDVRVDYFRASGAGGQHVNKTSS 221
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVR+TH+PTG+ V+C ERSQL NK L L+AKL + +E++ +I G EW
Sbjct: 222 AVRMTHMPTGIVVQCQNERSQLQNKEMCLKYLRAKLFELEQEKQEKLKAEIGGVHQAIEW 281
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIR+YVFHPY LVKD RT ET +I +VMDG+L+ FI+ YL+
Sbjct: 282 GSQIRSYVFHPYNLVKDHRTNVETGNIQAVMDGDLDIFIEGYLQ 325
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M+ +D +FW++ +A++ Q T +K ++ + K DD +++ M+ DA
Sbjct: 1 MQMSDPAFWNDPDKAKKISQEATLLKTEVEGHEELVRKADDLSEYLEMA--MEDGDASFA 58
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E+ +L K +++ E+ LLSG YDK A+I+ AGAGGT+AQ
Sbjct: 59 EDIEKQYHDLLKDIEKREVRLLLSGEYDKCNALITFHAGAGGTEAQ 104
>gi|336396093|ref|ZP_08577492.1| peptide chain release factor 2 [Lactobacillus farciminis KCTC 3681]
Length = 330
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 108/153 (70%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++S+ V I ++DL + R+ G GGQ++NK +AVRITH+PTG+ V
Sbjct: 174 HTSFASVDVMPEL-DDSIHVDINDDDLRVDVFRSSGAGGQHINKTSSAVRITHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ A++ LKAKL EE+RA + +I+G+ + WG QIR+YVFHPY
Sbjct: 233 SSQAQRSQLQNRETAMNMLKAKLFQREEEERAKKHAEIQGEQLDIGWGSQIRSYVFHPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD R+ + TS+ VMDG+L+PFI +YL++K
Sbjct: 293 MVKDHRSNYSTSNGQGVMDGDLDPFIYAYLQWK 325
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
++ FWD+ +AQ+ + +KDK + + +++ + +L +E D L+++
Sbjct: 3 ENGFWDDHEKAQKLIDETNSLKDKFDNFKELSEGLENLQVLAELYQEDPEDD--LMQQLE 60
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+L + L +EL LL+ PYD A++ I GAGGT++Q
Sbjct: 61 DDSSKLAEKLRSYELMMLLAEPYDSHNAILEIHPGAGGTESQ 102
>gi|167750196|ref|ZP_02422323.1| hypothetical protein EUBSIR_01170 [Eubacterium siraeum DSM 15702]
gi|167656758|gb|EDS00888.1| peptide chain release factor 2 [Eubacterium siraeum DSM 15702]
gi|291556130|emb|CBL33247.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
siraeum V10Sc8a]
Length = 370
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 105/151 (69%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP + E+ +D++I E+++++ RA G GGQ VNK +AVRITHIPTG+
Sbjct: 214 HTSFASVEVMPEINED-IDIEISEDEIKMDVYRASGAGGQKVNKTSSAVRITHIPTGIVC 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ N+ A+ LK+KLL I E + +I I+G+ ++ WG QIR+YVF PY
Sbjct: 273 ACQTERSQHQNREYAMRMLKSKLLEIKEREHLDKISDIKGEQLQIAWGAQIRSYVFMPYT 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RTG+E +I +VMDG+L+ FI +YLK
Sbjct: 333 MVKDHRTGYEMGNIGAVMDGDLDGFINAYLK 363
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 77/144 (53%), Gaps = 2/144 (1%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M ++ L+ + E ++E+ + L L+ E+ +LE ++A FW++ +Q+ Q +
Sbjct: 1 MLEYDELKVEFEGYEPELKELAGALDLDNLKAEIVKLEEQSAQPDFWNDVENSQKISQKI 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+ K+ + + DD +T+++L +E D D +L E + K L+ +L L
Sbjct: 61 GEDKNIVQSYEKLRESYDDVMTMLELAQEED--DESMLPEIQELAKHFRTELESQKLATL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
LSG +D A+++ AGAGGT+AQ
Sbjct: 119 LSGEFDHNNAILTFHAGAGGTEAQ 142
>gi|115311854|sp|Q4L4H9.2|RF2_STAHJ RecName: Full=Peptide chain release factor 2; Short=RF-2
Length = 371
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 106/157 (67%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH PTG+ V
Sbjct: 213 HTSFASCDVIPEFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LKAKL + E++ E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 273 NNQNERSQIKNREAAMKMLKAKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYS 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 300
+VKD RT ET + +VMDGE+ PFI+SYL+Y + S
Sbjct: 333 MVKDHRTNEETGKVDAVMDGEIGPFIESYLRYTMNQS 369
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
++++++ + + +IR S + E + E E + FWD++ +AQ+ + +K
Sbjct: 6 IKRNIDEYRNNLAQIRGSLDFENKETNIQEYEEMMTEPDFWDDQNKAQDVIDKNNALKSV 65
Query: 67 INLLTDFKTKMDD-AVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
+N + + +++D T L EE+D LE+ KE +DQFEL LL GP+
Sbjct: 66 VNGYHELEEEVEDMTATWELLQEELDGDVKSDLEQNVLDFKE---KVDQFELQLLLDGPH 122
Query: 126 DKEGAVISITAGAGGTDAQ 144
D A++ + GAGGT++Q
Sbjct: 123 DANNAILELHPGAGGTESQ 141
>gi|357636987|ref|ZP_09134862.1| peptide chain release factor 2 [Streptococcus macacae NCTC 11558]
gi|357585441|gb|EHJ52644.1| peptide chain release factor 2 [Streptococcus macacae NCTC 11558]
Length = 325
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +E+++V I +ED+++ R+GG GGQNVNKV T VR+TH PTG+ V
Sbjct: 172 HTSFASVEVMPEL-DETIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHTPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + EE++A E+ ++GD + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQMEEEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E + + VMDG+L+ FI ++LK++
Sbjct: 291 MVKDHRTNYEVAQVDKVMDGDLDGFIDAFLKWR 323
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K K + + D+ + ++ EE D + G LEE +
Sbjct: 6 FWNDNVAAQKTSQELNELKLKYETFNNMQELSDETELLQEMLEE-DESLQGELEEN---L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
++L K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 EKLGKMMASYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|153810056|ref|ZP_01962724.1| hypothetical protein RUMOBE_00437 [Ruminococcus obeum ATCC 29174]
gi|149834234|gb|EDM89314.1| peptide chain release factor 2 [Ruminococcus obeum ATCC 29174]
Length = 335
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 107/152 (70%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF +VMP + ++ +DV+I ++D+ I R+ G GGQ++NK +A+RITH PTG+ V
Sbjct: 174 QTSFVSCDVMPDIKKD-LDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK KA+ LKAKL ++ +++ +++ IRG+ WG QIR+YV PY
Sbjct: 233 QCQNERSQHMNKDKAMQMLKAKLYLLKQQEAEAKLSGIRGEVTDIGWGNQIRSYVMQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
+VKD RT ET ++ +V+DG+++PFI +YLK+
Sbjct: 293 MVKDHRTSEETGNVDAVLDGDIDPFINAYLKW 324
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M+A D FWDN +Q+ ++ L +KD + + +T+M+D T++++ E D ++
Sbjct: 1 MEAPD--FWDNAEVSQQKMKELKSMKDDMEIYHSLETQMEDMETMIEMGYE--ENDPEII 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
E ++ E K D + LLSG YD E A+I + AGAGGT+A
Sbjct: 57 PEIQEMLDEFQKNFDSIRVKTLLSGEYDSENAIIKLNAGAGGTEA 101
>gi|421217248|ref|ZP_15674149.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070335]
gi|395584734|gb|EJG45126.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070335]
Length = 293
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 114/155 (73%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+T+IPTG+ V
Sbjct: 140 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVV 198
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 199 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 258
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +E + + VMDG+L+ FI +YLK++ S
Sbjct: 259 MVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWRIS 293
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D + +E + + EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 18 DESVHDELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 68
>gi|357237810|ref|ZP_09125150.1| peptide chain release factor 2 [Streptococcus ictaluri 707-05]
gi|356753559|gb|EHI70669.1| peptide chain release factor 2 [Streptococcus ictaluri 707-05]
Length = 327
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP L +++++V I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFVSVEVMPEL-DDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVSALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG++E FI +YLK++ S
Sbjct: 291 MVKDHRTNFEVAQVDKVMDGDIEGFIDAYLKWRMS 325
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K K + + D+ +++ EE DS + EE + +
Sbjct: 6 FWNDNIAAQKTSQELNELKLKYETFHNMQELSDETELYLEMLEEDDS----VKEELEASL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+L + L +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 TKLGQILASYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|18311152|ref|NP_563086.1| peptide chain release factor 2 [Clostridium perfringens str. 13]
gi|18145835|dbj|BAB81876.1| peptide chain release factor 2 [Clostridium perfringens str. 13]
Length = 323
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 103/150 (68%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P L + D++I DL I RAGG GGQ+VNK E+AVRITHIPTG+ V
Sbjct: 173 QTSFASVEVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVV 231
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ +N+ A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY
Sbjct: 232 QCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYS 291
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD RT ETS++ VMDG+++ FI +YL
Sbjct: 292 MVKDHRTNVETSNVNGVMDGDIDNFIIAYL 321
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
++ FWD+ +AQE Q VKDKI+ + ++DD + +L EE D A +E
Sbjct: 3 EAGFWDDVQKAQEVTQEAKRVKDKIDKFRNLNERIDDVEVLKELMEENDEETA---KEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S +K L+K +D ++ +LSG YD+ A++++ G GG+DA
Sbjct: 60 SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDAN 101
>gi|256750898|ref|ZP_05491782.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus
CCSD1]
gi|256750233|gb|EEU63253.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus
CCSD1]
Length = 330
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 120/188 (63%), Gaps = 9/188 (4%)
Query: 117 LTQLLSGPY-----DKEGAV---ISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEE 168
+T ++ GP+ E V + I+ TSF+ EV+P L + ++V+I E
Sbjct: 139 VTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEVLPELKND-IEVEIRPE 197
Query: 169 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 228
DL+I RA G GGQ VNK E+AVRITH+PTG+ V C ERSQ+ N+ A+ LKAKLL
Sbjct: 198 DLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLD 257
Query: 229 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 288
+ +++ +I+ ++G+ +A WG QIR+YVF PY LVKD RT +E ++ +VMDGE++ F
Sbjct: 258 LMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGF 317
Query: 289 IKSYLKYK 296
I +YLK K
Sbjct: 318 INAYLKQK 325
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD +FW++ ++QE + ++K+ + TK +D T+++L ++ D + +E
Sbjct: 2 ADPNFWNDIKKSQELAKRQKELKELLEEYNSLVTKWEDLSTLIELG--LEEGDESITDEV 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
KEL K L+ ++ LL+G YDK A++SI AG+GGT+AQ
Sbjct: 60 DKEYKELKKKLEDLKIKTLLNGLYDKNNAILSIHAGSGGTEAQ 102
>gi|49483011|ref|YP_040235.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|56749421|sp|Q6GIN7.1|RF2_STAAR RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|49241140|emb|CAG39818.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MRSA252]
Length = 369
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 175/359 (48%), Gaps = 72/359 (20%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQE----------- 55
++++++ + + +IR S L+ E + E E A+ +FWDN+ +AQ+
Sbjct: 6 IKRNIDKYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAI 65
Query: 56 -----TLQALTDVKDKI-NLL----------------TDFKTKMDDAVTIVKLTEEMDST 93
TLQA D D +LL +FK K+D+ + L D+
Sbjct: 66 VNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDLEQEVINFKAKVDEYELQLLLDGPHDAN 125
Query: 94 DAGL-LEEAASIIKELNKALDQFELTQLLSG------------PYDKEGAVISITAGAGG 140
+A L L A + + A F + Q P D E + S+T G
Sbjct: 126 NAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFKVKTVDYLPGD-EAGIKSVTLLIKG 184
Query: 141 TDA-------------------------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFS 175
+A TSF+ +V+P + ++++I +D+ +
Sbjct: 185 HNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTF 244
Query: 176 RAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRA 235
RA G GGQ++NK E+A+RITH P+G+ V ERSQ+ N+ A+ LK+KL + E++A
Sbjct: 245 RASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQA 304
Query: 236 SEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
E+ +IRG+ + WG QIR+YVFHPY +VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 305 REMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLR 363
>gi|322388283|ref|ZP_08061887.1| peptide chain release factor RF2 [Streptococcus infantis ATCC
700779]
gi|321140955|gb|EFX36456.1| peptide chain release factor RF2 [Streptococcus infantis ATCC
700779]
Length = 325
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVDIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTNFEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N KMD+ V++ + + D + +E +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFH----KMDELQDEVEILLDFLAEDESVKDELVEKL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL++ + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 SELDQMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|420262017|ref|ZP_14764660.1| peptide chain release factor 2 [Enterococcus sp. C1]
gi|394771039|gb|EJF50823.1| peptide chain release factor 2 [Enterococcus sp. C1]
Length = 329
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/153 (50%), Positives = 106/153 (69%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L + ++DV+I +DL+I RA G GGQ++NK E+AVRITHIPTG V
Sbjct: 174 HTSFCSVDVMPEL-DGAIDVEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+ LKAKL + E++ E +RG+ ++ WG QIR+YVFHPY
Sbjct: 233 ASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQLEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT ET ++ +VMDG+L+ FI +YLK K
Sbjct: 293 MVKDHRTNFETGNVQAVMDGDLDGFIDAYLKLK 325
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD +FWD+ +AQ+ + A K+ + ++++ ++++ +E D + E
Sbjct: 2 ADPTFWDDSEKAQQVINANNANKETYDQFNQLAEELEELEVMLEMIQE--EADPEMEAEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ I +LN+ + +EL+ LL PYD+ A+I + GAGGT++Q
Sbjct: 60 DARIGKLNEKMASYELSMLLDEPYDRNNAIIELHPGAGGTESQ 102
>gi|323489912|ref|ZP_08095134.1| peptide chain release factor 2 [Planococcus donghaensis MPA1U2]
gi|323396419|gb|EGA89243.1| peptide chain release factor 2 [Planococcus donghaensis MPA1U2]
Length = 327
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 152/326 (46%), Gaps = 75/326 (23%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
D FW+N+ AQ + L +K+ +N F ++ ++L E D D E+
Sbjct: 3 DPDFWNNQETAQTVISELNGLKEVVNAYYSFMETQENMEMSLELLREEDDEDL--HEDVD 60
Query: 103 SIIKELNKALDQFELTQLLSGPYDK----------------------------------- 127
+K+ L +ELT LLS PYDK
Sbjct: 61 KDMKQFISDLADYELTMLLSEPYDKNNAILELHPGAGGTESQDWCSMLLRMYTRWAEKRG 120
Query: 128 ------------EGAVISITAGAGGTDA-------------------------QTSFSGA 150
E V S+T G G +A TSF
Sbjct: 121 FKVETLDYLAGDEAGVKSVTLGIRGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180
Query: 151 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 210
EVMP E +++ I EDL+I RA G GGQ++N ++AVRITH PTG V C +ERS
Sbjct: 181 EVMPEFTGE-IEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHAPTGAVVTCQQERS 239
Query: 211 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 270
Q+ N+ KA+ LKAKL + E+ + + +IRG+ + WG QIR+YVFHPY +VKD RT
Sbjct: 240 QIKNREKAMQMLKAKLYALKIEEEEARLLEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 299
Query: 271 GHETSDIVSVMDGELEPFIKSYLKYK 296
ET ++ +VMDG+++ FI S L+ K
Sbjct: 300 NFETGNLGAVMDGDIDGFINSLLRSK 325
>gi|320161067|ref|YP_004174291.1| peptide chain release factor 2 [Anaerolinea thermophila UNI-1]
gi|319994920|dbj|BAJ63691.1| peptide chain release factor 2 [Anaerolinea thermophila UNI-1]
Length = 351
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 108/157 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P + ++QI +DL I R+ GGQNV K TAVRITHIPTG+ V
Sbjct: 192 HTSFAQVEVLPEISNGDNEIQINPDDLRIDIYRSSSAGGQNVQKNATAVRITHIPTGIVV 251
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ L+A+L + +++ ++ ++RG+ +KAEWG QIR+YV HPY+
Sbjct: 252 SCQNERSQMQNRENAMRVLRARLAELKRQEQERQLAELRGEYIKAEWGSQIRSYVLHPYQ 311
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 300
LVKD RT +ET + +V+DGEL+ FI++YL+ + + S
Sbjct: 312 LVKDHRTEYETGNTQAVLDGELDGFIEAYLRSQKTKS 348
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
Query: 34 LAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDST 93
L +L+ +A + WD+ AQ ++ + D++++I F + D + + +S
Sbjct: 16 LEQLQKEAENPGIWDDPTSAQRLMKRIADLREEIEGWNQFLKRCQDGLELA------ESE 69
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D L E+ I L K L Q ELT LLSGPYD E A+++I AGAGGTD+Q
Sbjct: 70 DESLREDLEKEISALEKELQQRELTTLLSGPYDHENALLTINAGAGGTDSQ 120
>gi|228472944|ref|ZP_04057701.1| peptide chain release factor 2, programmed [Capnocytophaga
gingivalis ATCC 33624]
gi|228275526|gb|EEK14303.1| peptide chain release factor 2, programmed [Capnocytophaga
gingivalis ATCC 33624]
Length = 366
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 112/163 (68%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ V PL +++++++I D+ R+ G GGQNVNKVET
Sbjct: 195 LVRISPFDSNAKRHTSFASVYVYPL-ADDTIEIEINPADISFETMRSSGAGGQNVNKVET 253
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVR+ H PTG+ + +E RSQL NK KAL LK++L I ++R ++ +I + +K EW
Sbjct: 254 AVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLYEIELKKRQAKRDEIEANKMKIEW 313
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYV HPYKLVKDVR+G+ET+++ +VM+GEL+ F+K+YL
Sbjct: 314 GSQIRNYVMHPYKLVKDVRSGYETTNVDAVMNGELDDFLKAYL 356
>gi|387907320|ref|YP_006337656.1| peptide chain release factor 2 [Blattabacterium sp. (Blaberus
giganteus)]
gi|387582213|gb|AFJ90991.1| peptide chain release factor 2 [Blattabacterium sp. (Blaberus
giganteus)]
Length = 365
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 115/176 (65%), Gaps = 5/176 (2%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
+I I+ + TSFS V P++ ++ +++ I D++ R+ G GGQNVNKVET
Sbjct: 191 LIRISPFDSNSKRHTSFSSVYVYPMINDD-INIDIKMSDIQWETFRSSGSGGQNVNKVET 249
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
VR+ H PTG+T+ TE RSQ+ N+ KAL LK++L + +R + ++I K EW
Sbjct: 250 GVRLRHHPTGITIENTEFRSQIQNRQKALQLLKSRLFEMEMMKRNEKKEKIESTKKKIEW 309
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY----KYSMSLS 302
G QIRNY+ HPYKLVKD+RTG+ET+ I SVMDGE++ F+K +L Y K ++SLS
Sbjct: 310 GSQIRNYILHPYKLVKDLRTGYETTQIQSVMDGEIDIFLKKFLIYNRENKNTISLS 365
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 75/137 (54%), Gaps = 10/137 (7%)
Query: 8 RKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI 67
++++++ S+++ +I + +++K + E K ++ ++W N ++Q+ ++ + ++K I
Sbjct: 4 KEEIQSISEKIHKIYDILKIDKIQKYIEE---KTSNPNYWKNYKKSQKFIKNMHNMKTCI 60
Query: 68 NLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASI-IKELNKALDQFELTQLLSGPYD 126
T+ K ++ I L++E + LE+ I + + K L EL +LS D
Sbjct: 61 KDFTELKNSFEELEIIFSLSKEEN------LEKEFEIQLYKTKKLLSNIELKNILSEKED 114
Query: 127 KEGAVISITAGAGGTDA 143
A++ I++GAGGT++
Sbjct: 115 SFNAILQISSGAGGTES 131
>gi|422875084|ref|ZP_16921569.1| peptide chain release factor 2 [Clostridium perfringens F262]
gi|380304079|gb|EIA16372.1| peptide chain release factor 2 [Clostridium perfringens F262]
Length = 323
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 103/150 (68%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P L + D++I DL I RAGG GGQ+VNK E+AVRITHIPTG+ V
Sbjct: 173 QTSFASVEVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVV 231
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ +N+ A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY
Sbjct: 232 QCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYS 291
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD RT ETS++ VMDG+++ FI +YL
Sbjct: 292 MVKDHRTNVETSNVNGVMDGDIDNFIIAYL 321
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
++ FWD+ +AQE Q VKDKI+ + ++DD + +L EE D A +E
Sbjct: 3 EAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETA---KEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S +K L+K +D ++ +LSG YD+ A++++ G GG+DA
Sbjct: 60 SEVKALSKEIDTLKIEIILSGEYDRNDAILTLHTGVGGSDAN 101
>gi|168210100|ref|ZP_02635725.1| peptide chain release factor 2 [Clostridium perfringens B str. ATCC
3626]
gi|170711768|gb|EDT23950.1| peptide chain release factor 2 [Clostridium perfringens B str. ATCC
3626]
Length = 323
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 103/150 (68%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P L + D++I DL I RAGG GGQ+VNK E+AVRITHIPTG+ V
Sbjct: 173 QTSFASVEVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVV 231
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ +N+ A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY
Sbjct: 232 QCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYS 291
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD RT ETS++ VMDG+++ FI +YL
Sbjct: 292 MVKDHRTNVETSNVNGVMDGDIDNFIIAYL 321
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
++ FWD+ +AQE Q VKDKI+ + ++DD + +L EE D A +E
Sbjct: 3 EAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETA---KEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S +K L+K +D ++ +LSG YD+ A++++ G GG+DA
Sbjct: 60 SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDAN 101
>gi|222152785|ref|YP_002561962.1| peptide chain release factor 2 [Streptococcus uberis 0140J]
gi|254790921|sp|B9DRN6.1|RF2_STRU0 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|222113598|emb|CAR41450.1| peptide chain release factor 2 [Streptococcus uberis 0140J]
Length = 366
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 211 HTSFTSVEVMPEL-DDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 269
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 270 ASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYT 329
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT E + + VMDGE++ FI +YLK++
Sbjct: 330 MVKDHRTNFEVAQVDKVMDGEIDGFIDAYLKWR 362
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 4/138 (2%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+ + +++ R S L LE+E+A LE K + FW++ AQ+T Q L +K
Sbjct: 6 IRQKIVENKEKLTSFRRSLDLDGLEEEIALLENKMTEPDFWNDNIAAQKTSQELNTLKST 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
D D+ +L EM + D + EE + +L + L Q+E+T LLS PYD
Sbjct: 66 FETFHDMLELSDET----ELYLEMLAEDESIKEELEEALVKLEQILSQYEMTLLLSEPYD 121
Query: 127 KEGAVISITAGAGGTDAQ 144
A++ I G+GGT+AQ
Sbjct: 122 HNNAILEIHPGSGGTEAQ 139
>gi|337744478|ref|YP_004638640.1| protein PrfB [Paenibacillus mucilaginosus KNP414]
gi|379718117|ref|YP_005310248.1| protein PrfB [Paenibacillus mucilaginosus 3016]
gi|386720677|ref|YP_006187002.1| protein PrfB [Paenibacillus mucilaginosus K02]
gi|336295667|gb|AEI38770.1| PrfB [Paenibacillus mucilaginosus KNP414]
gi|378566789|gb|AFC27099.1| PrfB [Paenibacillus mucilaginosus 3016]
gi|384087801|gb|AFH59237.1| protein PrfB [Paenibacillus mucilaginosus K02]
Length = 333
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF ++MP + ++ ++++I EDL++ RA G GGQ++N ++AVRITH+PTGV V
Sbjct: 174 HTSFVSCDIMPEI-DDDVEIEIRTEDLKVDTYRASGAGGQHINTTDSAVRITHMPTGVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ L++KL E++ ++ +IRG+ WG QIR+YVFHPY
Sbjct: 233 SCQTERSQIKNRDRAMKMLRSKLYEKKIEEQQKQLAEIRGEVADIAWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RTG ET ++ +VMDG+L+PFI +YL+
Sbjct: 293 MVKDHRTGEETGNVGAVMDGDLDPFIDAYLR 323
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M A D FWD+ +AQ+ + + +K I+ L + +D +++L +E D L
Sbjct: 1 MSAPD--FWDDNEKAQKLIAEMNAIKGSIDQLQALTAEYEDLELMMELVQE--ENDESLA 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E S I L K L+ FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 57 SELTSGITALVKKLEGFELQLLLSQPYDKLNAILELHPGAGGTESQ 102
>gi|49485626|ref|YP_042847.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57650094|ref|YP_185692.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
COL]
gi|150393263|ref|YP_001315938.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
JH1]
gi|387142448|ref|YP_005730841.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
TW20]
gi|56749392|sp|Q6GB76.1|RF2_STAAS RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|56749443|sp|Q7A6R4.2|RF2_STAAN RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|56749454|sp|Q99VM1.2|RF2_STAAM RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|71153100|sp|Q5HHR5.1|RF2_STAAC RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|115311853|sp|Q2YSH5.2|RF2_STAAB RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|189040005|sp|A6TZN3.1|RF2_STAA2 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|49244069|emb|CAG42495.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57284280|gb|AAW36374.1| peptide chain release factor 2, programmed frameshift
[Staphylococcus aureus subsp. aureus COL]
gi|149945715|gb|ABR51651.1| hypothetical protein SaurJH1_0795 [Staphylococcus aureus subsp.
aureus JH1]
gi|269940331|emb|CBI48708.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
TW20]
Length = 369
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 175/359 (48%), Gaps = 72/359 (20%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQE----------- 55
++++++ + + +IR S L+ E + E E A+ +FWDN+ +AQ+
Sbjct: 6 IKRNIDKYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAI 65
Query: 56 -----TLQALTDVKDKI-NLL----------------TDFKTKMDDAVTIVKLTEEMDST 93
TLQA D D +LL +FK K+D+ + L D+
Sbjct: 66 VNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHDAN 125
Query: 94 DAGL-LEEAASIIKELNKALDQFELTQLLSG------------PYDKEGAVISITAGAGG 140
+A L L A + + A F + Q P D E + S+T G
Sbjct: 126 NAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGD-EAGIKSVTLLIKG 184
Query: 141 TDA-------------------------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFS 175
+A TSF+ +V+P + ++++I +D+ +
Sbjct: 185 HNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTF 244
Query: 176 RAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRA 235
RA G GGQ++NK E+A+RITH P+G+ V ERSQ+ N+ A+ LK+KL + E++A
Sbjct: 245 RASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQA 304
Query: 236 SEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
E+ +IRG+ + WG QIR+YVFHPY +VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 305 REMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLR 363
>gi|257877567|ref|ZP_05657220.1| peptide chain release factor 2 [Enterococcus casseliflavus EC20]
gi|257811733|gb|EEV40553.1| peptide chain release factor 2 [Enterococcus casseliflavus EC20]
Length = 329
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/153 (50%), Positives = 106/153 (69%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L + ++DV+I +DL+I RA G GGQ++NK E+AVRITHIPTG V
Sbjct: 174 HTSFCSVDVMPEL-DGAIDVEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+ LKAKL + E++ E +RG+ ++ WG QIR+YVFHPY
Sbjct: 233 ASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQLEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT ET ++ +VMDG+L+ FI +YLK K
Sbjct: 293 MVKDHRTNFETGNVQAVMDGDLDGFIDAYLKLK 325
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD +FWD+ +AQ+ + A K+ + ++++ ++++ +E D + E
Sbjct: 2 ADPTFWDDSEKAQQVINANNANKETYDQFNQLAEELEELEVMLEMIQE--EADPEMEAEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ I +LN+ + +EL+ LL PYD+ A+I + GAGGT++Q
Sbjct: 60 EARITKLNEKMASYELSMLLDEPYDRNNAIIELHPGAGGTESQ 102
>gi|257867488|ref|ZP_05647141.1| peptide chain release factor 2 [Enterococcus casseliflavus EC30]
gi|257873817|ref|ZP_05653470.1| peptide chain release factor 2 [Enterococcus casseliflavus EC10]
gi|257801544|gb|EEV30474.1| peptide chain release factor 2 [Enterococcus casseliflavus EC30]
gi|257807981|gb|EEV36803.1| peptide chain release factor 2 [Enterococcus casseliflavus EC10]
Length = 329
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/153 (50%), Positives = 106/153 (69%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L + ++DV+I +DL+I RA G GGQ++NK E+AVRITHIPTG V
Sbjct: 174 HTSFCSVDVMPEL-DGAIDVEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+ LKAKL + E++ E +RG+ ++ WG QIR+YVFHPY
Sbjct: 233 ASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQLEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT ET ++ +VMDG+L+ FI +YLK K
Sbjct: 293 MVKDHRTNFETGNVQAVMDGDLDGFIDAYLKLK 325
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A +FWD+ +AQ+ + A K+ + ++++ ++++ +E D + E
Sbjct: 2 AHPTFWDDSEKAQQVINANNANKETYDQFNQLAEELEELEVMLEMIQE--EADPEMEAEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ I +LN+ + +EL+ LL PYD+ A+I + GAGGT++Q
Sbjct: 60 EARITKLNEKMASYELSMLLDEPYDRNNAIIELHPGAGGTESQ 102
>gi|70727136|ref|YP_254052.1| peptide chain release factor 2 [Staphylococcus haemolyticus
JCSC1435]
gi|68447862|dbj|BAE05446.1| peptide chain release factor 2 [Staphylococcus haemolyticus
JCSC1435]
Length = 332
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 106/157 (67%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH PTG+ V
Sbjct: 174 HTSFASCDVIPEFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVV 233
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LKAKL + E++ E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 234 NNQNERSQIKNREAAMKMLKAKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYS 293
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 300
+VKD RT ET + +VMDGE+ PFI+SYL+Y + S
Sbjct: 294 MVKDHRTNEETGKVDAVMDGEIGPFIESYLRYTMNQS 330
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDD-AVTIVKLTEEMDSTDAGLLEEAASI 104
FWD++ +AQ+ + +K +N + + +++D T L EE+D LE+
Sbjct: 6 FWDDQNKAQDVIDKNNALKSVVNGYHELEEEVEDMTATWELLQEELDGDVKSDLEQNVLD 65
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
KE +DQFEL LL GP+D A++ + GAGGT++Q
Sbjct: 66 FKE---KVDQFELQLLLDGPHDANNAILELHPGAGGTESQ 102
>gi|332798808|ref|YP_004460307.1| peptide chain release factor 2 [Tepidanaerobacter acetatoxydans
Re1]
gi|332696543|gb|AEE91000.1| peptide chain release factor 2 [Tepidanaerobacter acetatoxydans
Re1]
Length = 365
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 103/151 (68%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP + ++ PE DL+I R+GG GGQ+VNK E+AVRITHIPTG V
Sbjct: 212 HTSFASVDVMPEIDDDIEIDIKPE-DLKIDTFRSGGAGGQHVNKTESAVRITHIPTGTVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ +N+ A+ L+AKL I +E++ E+ +IRG + WG QIR+Y+FHPY
Sbjct: 271 SCQNERSQQSNRNTAMKILRAKLFDIYQEEQQKELDKIRGSQKEIAWGSQIRSYIFHPYS 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGEL+ FI +YLK
Sbjct: 331 LVKDHRTDVEVGNVQAVMDGELDEFINAYLK 361
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 86/137 (62%), Gaps = 2/137 (1%)
Query: 8 RKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI 67
R ++EAA + E+R S + +++ E+ +LE K + FW+++ AQ+TLQ L D+K+K
Sbjct: 6 RIEIEAAKPVLTELRDSLEIDKIKFEINQLEQKTFAADFWNDQELAQKTLQRLNDLKEKF 65
Query: 68 NLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDK 127
+ T + K DD +T+++L E D D L E + +K+ K L++ +L LLSG YD
Sbjct: 66 DNFTLLEKKYDDLLTLIELCTETD--DEELRTELLNEMKDFKKQLEKMKLQTLLSGKYDG 123
Query: 128 EGAVISITAGAGGTDAQ 144
A++++ AGAGGT+AQ
Sbjct: 124 RNAILTLHAGAGGTEAQ 140
>gi|339445467|ref|YP_004711471.1| protein chain release factor B [Eggerthella sp. YY7918]
gi|338905219|dbj|BAK45070.1| protein chain release factor B [Eggerthella sp. YY7918]
Length = 362
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
T+F+G EV+P+LP++ ++V + D+ + R+ G GGQ VN ++AVR+TH+PTG+ V
Sbjct: 208 HTTFAGVEVLPVLPDD-IEVDLNPADVRVDVYRSSGPGGQCVNTTDSAVRLTHMPTGIVV 266
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C E+SQL NK A LKAKL + E++RA E+ Q+RG+ + + +G QIRNYV +PY+
Sbjct: 267 TCQNEKSQLQNKEAAFRVLKAKLYELEEQKRAEELAQLRGERMDSTFGSQIRNYVLYPYQ 326
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKDVR+G ET ++ +V+DG+L+ F+ Y +++ S
Sbjct: 327 MVKDVRSGIETGNVDAVLDGDLDEFVVGYHRWRVS 361
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
Query: 9 KDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKIN 68
KD+E A+ RV + A + + EL +L+ ++A FWD+ A AQ + + ++D I
Sbjct: 5 KDIEEAARRVTDAHAYLHVDEKRAELEKLDAESAKPGFWDDAAHAQSVSKQASVLRDTIA 64
Query: 69 LLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKE 128
D T +DDA L E ++ EEA + +L+ LD E+ S +D
Sbjct: 65 EYEDAATLLDDARAAFDLASEDEAF----AEEADEALDKLDGLLDTLEINSWFSERFDSG 120
Query: 129 GAVISITAGAGGTDAQ 144
A++++ G+GG +AQ
Sbjct: 121 DAILTVNPGSGGLEAQ 136
>gi|225868809|ref|YP_002744757.1| peptide chain release factor 2 [Streptococcus equi subsp.
zooepidemicus]
gi|225702085|emb|CAW99717.1| peptide chain release factor 2 [Streptococcus equi subsp.
zooepidemicus]
Length = 338
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 183 HTSFVSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 241
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 242 ASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYT 301
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT E + + VMDG++E FI +YLK++
Sbjct: 302 MVKDHRTNFEVAQVDKVMDGDIEGFIDAYLKWR 334
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE K + FW++ AQ+T Q L ++K + + D+ +++ +E
Sbjct: 1 MEEDIALLENKMTEPDFWNDNMAAQKTSQELNELKLTYQTFHNMQELSDETELYLEMLDE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
DS EE + + L++ L +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 DDSVK----EELEASLTRLSQMLASYEMTLLLSEPYDHSNAILEIHPGSGGTEAQ 111
>gi|150024963|ref|YP_001295789.1| peptide chain release factor 2 [Flavobacterium psychrophilum
JIP02/86]
gi|149771504|emb|CAL42973.1| Peptide chain release factor 2 (RF-2) [Flavobacterium psychrophilum
JIP02/86]
Length = 293
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 108/150 (72%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL+ +++++++I D+EI +R+ G GGQNVNKVET V++TH PTG+ +
Sbjct: 137 HTSFASVYVYPLV-DDTIEIEINPADIEIITARSSGAGGQNVNKVETKVQLTHKPTGIQI 195
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C+E RSQ N+ +A+ L+++L I +++ + I +K EWG QIRNYV PYK
Sbjct: 196 QCSETRSQHDNRNRAMQMLRSQLYEIELKKQQEQRNDIEAGKMKIEWGSQIRNYVMQPYK 255
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRTGHETSD+ SVM+G ++ F+K+YL
Sbjct: 256 LVKDVRTGHETSDVDSVMNGNIDAFLKAYL 285
>gi|269925864|ref|YP_003322487.1| peptide chain release factor 2 [Thermobaculum terrenum ATCC
BAA-798]
gi|269789524|gb|ACZ41665.1| bacterial peptide chain release factor 2 (bRF- 2) [Thermobaculum
terrenum ATCC BAA-798]
Length = 372
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 115/163 (70%), Gaps = 5/163 (3%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P + EE+ +VQI EEDL+I RA GGQ+VNK +AVRITHIPTG+ V
Sbjct: 212 HTSFALVEVLPDV-EETPEVQIREEDLKIDTYRASSAGGQHVNKTSSAVRITHIPTGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ NK AL L+A+LL + ++A E +++G+ + WG QIR+YV HPY
Sbjct: 271 TCQNERSQFQNKETALKILRARLLELELRRQAEEQARLKGEHIATGWGSQIRSYVLHPYT 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDA 306
+VKD RTG+E SD+ SV+DGE++PFI++YL S +L+A D+
Sbjct: 331 MVKDHRTGYEVSDVESVLDGEIDPFIEAYL----SQTLAAGDS 369
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 81/141 (57%), Gaps = 2/141 (1%)
Query: 4 FYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDV 63
+ L+ ++ +R+ + L+ E+ +LE +AA S W + AEAQ+ ++ L D+
Sbjct: 2 YEELKDKIDNLRERISTFKEHLDLENKRLEIEKLEQRAASSELWADPAEAQKVMKNLNDL 61
Query: 64 KDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSG 123
KD++ + + + +++DA ++ L E DS A EAAS I+ L L+ EL LLSG
Sbjct: 62 KDQLEVWSKIERRLEDAEVLLDLAYEEDS--ASDFHEAASQIRALENQLNHLELELLLSG 119
Query: 124 PYDKEGAVISITAGAGGTDAQ 144
YD+E A+I+I A GG DAQ
Sbjct: 120 SYDQEDAIIAIHAREGGIDAQ 140
>gi|322389911|ref|ZP_08063451.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC
903]
gi|321143347|gb|EFX38785.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC
903]
Length = 336
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L + +++V++ ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 183 HTSFTSVEVMPEL-DNTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 241
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY
Sbjct: 242 ASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYT 301
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E + + VMDG+++ FI +YLK++
Sbjct: 302 MVKDHRTNYEVAQVDKVMDGDIDGFIDAYLKWR 334
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 4/115 (3%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+E+A LE K + FWD+ AQ+T Q L ++K D++ ++ E
Sbjct: 1 MEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMVDLFDESEILLDFLAE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
DS + EE ++EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 DDS----VKEELIEKLEELDKRMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQ 111
>gi|402831042|ref|ZP_10879735.1| peptide chain release factor 2 [Capnocytophaga sp. CM59]
gi|402283091|gb|EJU31613.1| peptide chain release factor 2 [Capnocytophaga sp. CM59]
Length = 365
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 112/163 (68%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ V PL +++++++I D+ R+ G GGQNVNKVET
Sbjct: 195 LVRISPFDSNAKRHTSFASVYVYPL-ADDTIEIEINPADISFETMRSSGAGGQNVNKVET 253
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVR+ H PTG+ + +E RSQL NK KAL LK++L I ++R ++ +I + +K EW
Sbjct: 254 AVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLYEIELKKRQAKRDEIEANKMKIEW 313
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYV HPYKLVKDVR+G+ET+++ +VM+GEL+ F+K+YL
Sbjct: 314 GSQIRNYVMHPYKLVKDVRSGYETTNVDAVMNGELDDFLKAYL 356
>gi|108804456|ref|YP_644393.1| peptide chain release factor 2 [Rubrobacter xylanophilus DSM 9941]
gi|108765699|gb|ABG04581.1| bacterial peptide chain release factor 2 (bRF-2) [Rubrobacter
xylanophilus DSM 9941]
Length = 366
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/184 (44%), Positives = 118/184 (64%), Gaps = 9/184 (4%)
Query: 121 LSGPY-----DKEGAV---ISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEI 172
+SGPY E V + I+ + TSF+ V P + +++++V+I E+DL++
Sbjct: 178 VSGPYAFGLLSAERGVHRLVRISPFDASSRRHTSFASVAVAPAI-DDAVEVEIDEKDLKV 236
Query: 173 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 232
RA G GGQ+VNK ++AVRITH+PTG+ V+C ERSQ N+ AL LKA+L + E
Sbjct: 237 DTYRASGAGGQHVNKTDSAVRITHLPTGIVVQCQNERSQHQNRETALRVLKARLFELERE 296
Query: 233 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 292
+R EI G+ + WG QIR+YV HPY++VKD+RTG ET D+ V+DG+L+ FI +Y
Sbjct: 297 KREQEIAAQSGEKAEIGWGSQIRSYVLHPYRMVKDLRTGEETGDVDRVLDGDLDRFIYAY 356
Query: 293 LKYK 296
LK +
Sbjct: 357 LKRR 360
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
LR+ + S R++E+ A + +L + A L + + FWD+ A+ + +D+
Sbjct: 4 LREKISDLSQRLDELEAFFDVGRLRERAARLSEEMSRPGFWDDPDRAKGVAAEFSRTEDR 63
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ L+ + + +++D+ +++L E D LLEE ++ + + +++ E+ +L +G YD
Sbjct: 64 LKLMEELRGRLEDSSELLELAE----GDRELLEEVERELEGIERRIEEQEVARLFTGEYD 119
Query: 127 KEGAVISITAGAGGTDAQ 144
+ A+++I +GAGG D+Q
Sbjct: 120 EGDAILTINSGAGGVDSQ 137
>gi|195977853|ref|YP_002123097.1| peptide chain release factor 2 [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|225870173|ref|YP_002746120.1| peptide chain release factor 2 [Streptococcus equi subsp. equi
4047]
gi|414563741|ref|YP_006042702.1| peptide chain release factor 2 [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
gi|195974558|gb|ACG62084.1| peptide chain release factor 2 PrfB [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|225699577|emb|CAW93198.1| peptide chain release factor 2 [Streptococcus equi subsp. equi
4047]
gi|338846806|gb|AEJ25018.1| peptide chain release factor 2 [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
Length = 338
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 183 HTSFVSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 241
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 242 ASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYT 301
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT E + + VMDG++E FI +YLK++
Sbjct: 302 MVKDHRTNFEVAQVDKVMDGDIEGFIDAYLKWR 334
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 66/115 (57%), Gaps = 4/115 (3%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE K + FW++ AQ+T Q L ++K D + D+ +++ +E
Sbjct: 1 MEEDIALLENKMTEPDFWNDNMAAQKTSQELNELKLTYQTFHDMQELSDETELYLEMLDE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
DS L AS+IK L++ L +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 DDSVKEEL---EASLIK-LSQMLASYEMTLLLSEPYDHSNAILEIHPGSGGTEAQ 111
>gi|373463798|ref|ZP_09555381.1| peptide chain release factor 2 [Lactobacillus kisonensis F0435]
gi|371763879|gb|EHO52329.1| peptide chain release factor 2 [Lactobacillus kisonensis F0435]
Length = 354
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 109/155 (70%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++ + + I +DL++ R+ G GGQ+VNK +AVRITHIPTG+ V
Sbjct: 196 HTSFASVDVMPELNDD-VTININPDDLKVDVYRSSGAGGQHVNKTSSAVRITHIPTGIVV 254
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ A++ LK+KL +E++ +E +I G+ WG QIR+YVFHPY
Sbjct: 255 ASQAQRSQLQNRQTAMNMLKSKLYEREQEKKQAEKDKIEGEQKDIGWGSQIRSYVFHPYS 314
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RTG+ET+++ VMDG+L+PFI +YL+++ S
Sbjct: 315 MVKDHRTGYETANVNGVMDGDLDPFINAYLQWQLS 349
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L + +A E K A+ FWDN+ AQ+ + +K K + K+DD ++L E
Sbjct: 12 LSESIAINEAKMAEPGFWDNQETAQKLIDETNQMKTKRDSFNALVAKLDDLKVTLELISE 71
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+D+G+ EE +L L +++L LL+G YD A++ I GAGGT++Q
Sbjct: 72 --DSDSGMQEEFQDDSADLQAKLQRYQLGLLLNGKYDHNNAILEIHPGAGGTESQ 124
>gi|56964831|ref|YP_176562.1| peptide chain release factor 2 [Bacillus clausii KSM-K16]
gi|56911074|dbj|BAD65601.1| peptide chain release factor 2 [Bacillus clausii KSM-K16]
Length = 328
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 107/156 (68%), Gaps = 1/156 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP L ++++D+++ EDL+I RA G GGQ+VN ++AVRITH+PT V
Sbjct: 174 HTSFVSCEVMPEL-DDAVDIELNSEDLKIDTYRASGAGGQHVNTTDSAVRITHLPTNTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ +KAKL + E++ E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQSERSQIKNREQAMKMMKAKLYQLRIEEQERELAEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSM 299
+VKD RTG E + SVMDGE++ FI +YL+ +M
Sbjct: 293 MVKDHRTGFEIGNTNSVMDGEIDGFIDAYLRQSLAM 328
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD FW+++ +AQ + +K++++ D DD +L E D T+ L E
Sbjct: 2 ADPDFWNDQEQAQAIINETNGLKEQVHTFKDMAESYDDLEVSYELVREEDDTE--LASEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S + L + ++QFEL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 ESGLAALKQKMNQFELQLLLSAPYDKNNAILELHPGAGGTESQ 102
>gi|402310432|ref|ZP_10829398.1| peptide chain release factor 2 [Eubacterium sp. AS15]
gi|400368884|gb|EJP21891.1| peptide chain release factor 2 [Eubacterium sp. AS15]
Length = 316
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 107/150 (71%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P L ++S++V+I +DL++ R+ G GGQ+VNK E+A+RITHIPTGV V
Sbjct: 163 HTSFASVDVLPEL-DDSINVEINPKDLKVDTYRSSGAGGQHVNKTESAIRITHIPTGVVV 221
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ++N+ A+ L AKL+ + E + +I+ I+G + WG QIR+YVF PY
Sbjct: 222 QCQNERSQISNRETAMKMLTAKLIELKELEHKDKIEDIQGKYSQIAWGSQIRSYVFQPYT 281
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD RT +E +I SVMDG++ PFI +YL
Sbjct: 282 MVKDHRTNYEVGNIGSVMDGDIMPFINAYL 311
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 74 KTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVIS 133
K K +D + + S D+ EE + L K D + +L+G YD A++S
Sbjct: 25 KNKFEDILVLFDFA----SQDSSFEEELSKETDNLEKITDSLSTSIMLNGQYDANNAILS 80
Query: 134 ITAGAGGTDAQ 144
+ +G GG DAQ
Sbjct: 81 VHSGTGGLDAQ 91
>gi|386086741|ref|YP_006002615.1| Bacterial peptide chain release factor 2 (BRF-2) [Streptococcus
thermophilus ND03]
gi|312278454|gb|ADQ63111.1| Bacterial peptide chain release factor 2 (BRF-2) [Streptococcus
thermophilus ND03]
Length = 326
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RTG+ + + V+DG++E FI +YLK++
Sbjct: 291 MVKDHRTGYGVAQVDKVIDGDIEGFIDAYLKWR 323
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K K + K D+ +++ EE DS E +
Sbjct: 6 FWNDNIAAQKTSQELNELKIKYETFNNMKELSDETELYLEMLEEDDSVQE----ELEETL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
++L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 EKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|386830396|ref|YP_006237050.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
HO 5096 0412]
gi|385195788|emb|CCG15397.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
HO 5096 0412]
Length = 369
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 175/359 (48%), Gaps = 72/359 (20%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQE----------- 55
++++++ + + +IR S L+ E + E E A+ +FWDN+ +AQ+
Sbjct: 6 IKRNIDKYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAI 65
Query: 56 -----TLQALTDVKDKI-NLLTD----------------FKTKMDDAVTIVKLTEEMDST 93
TLQA D D +LL + FK K+D+ + L D+
Sbjct: 66 VNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLEQEVIYFKAKVDEYELQLLLDGPHDAN 125
Query: 94 DAGL-LEEAASIIKELNKALDQFELTQLLSG------------PYDKEGAVISITAGAGG 140
+A L L A + + A F + Q P D E + S+T G
Sbjct: 126 NAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGD-EAGIKSVTLLIKG 184
Query: 141 TDA-------------------------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFS 175
+A TSF+ +V+P + ++++I +D+ +
Sbjct: 185 HNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTF 244
Query: 176 RAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRA 235
RA G GGQ++NK E+A+RITH P+G+ V ERSQ+ N+ A+ LK+KL + E++A
Sbjct: 245 RASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQA 304
Query: 236 SEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
E+ +IRG+ + WG QIR+YVFHPY +VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 305 REMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLR 363
>gi|452943243|ref|YP_007499408.1| peptide chain release factor 2 [Hydrogenobaculum sp. HO]
gi|452881661|gb|AGG14365.1| peptide chain release factor 2 [Hydrogenobaculum sp. HO]
Length = 375
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 180/355 (50%), Gaps = 70/355 (19%)
Query: 17 RVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTK 76
R EE+ +S +++ KE+ + + ++ FW ++ +A+ Q ++DK+N T K++
Sbjct: 14 RFEELSSSIDEEKIRKEIEKYDQMMSEPDFWSDQEKAKSISQKRKALQDKLNTYTSLKSR 73
Query: 77 ---MDDAVTIVK-----------------------------LTEEMDSTDAGLLEEA--- 101
+D+ V+ +K L++EMD +A L +A
Sbjct: 74 IKDLDEMVSELKEEDLDTTLLISEELEAVEKDLKKFELETYLSDEMDINNAYLTIQAGAG 133
Query: 102 -------ASIIKEL-----NKALDQFELTQL--------------LSGPY-----DKEGA 130
AS++ + K + +LT + + GPY E
Sbjct: 134 GTEACDWASMLLRMYTRWAEKHGYEVQLTDINPDDVAGIKSATLYIKGPYAYGYLKSENG 193
Query: 131 V---ISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNK 187
V + I+ TSF+ V+P + E+ ++++I EEDL I RA G GGQ VNK
Sbjct: 194 VHRLVRISPFDANARRHTSFASVLVVPEVNED-VNIEIKEEDLRIDTYRASGAGGQYVNK 252
Query: 188 VETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVK 247
+TAVRITHIPTG+ V C +ERSQ+ N+ KA+ LKA+L + ++ + K + G
Sbjct: 253 TDTAVRITHIPTGIVVACQQERSQIQNRRKAMEMLKARLYQLELQKIEEKKKSLEGPKTD 312
Query: 248 AEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLS 302
WG +IR+Y+F P +LVKD+RTG E+ +I +VMDGE++ FI++YL+ K LS
Sbjct: 313 IGWGYKIRSYIFQPSQLVKDLRTGEESGNIEAVMDGEIDNFIEAYLRKKALNQLS 367
>gi|438001839|ref|YP_007271582.1| Peptide chain release factor 2; programmed frameshift-containing
[Tepidanaerobacter acetatoxydans Re1]
gi|432178633|emb|CCP25606.1| Peptide chain release factor 2; programmed frameshift-containing
[Tepidanaerobacter acetatoxydans Re1]
Length = 316
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 159/277 (57%), Gaps = 25/277 (9%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLLTDFKTKM-DDAVT 82
++ +K+L +++++ S +D R A TL A T+ +D +++L T+ +D
Sbjct: 52 MKDFKKQLEKMKLQTLLSGKYDGR-NAILTLHAGAGGTEAQDWVSMLLRMYTRWAEDKGY 110
Query: 83 IVKLTEEMDSTDAGLLEEAASIIKELNKALDQFE----LTQLLS-GPYDKEGAVISITAG 137
V + + + +AG+ ++A+++ E A + + +L+ P+D G
Sbjct: 111 KVSILDMLPGDEAGI--KSAAVLVEGPNAYGYLKSEKGVHRLVRISPFDAAGR------- 161
Query: 138 AGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 197
TSF+ +VMP + ++ PE DL+I R+GG GGQ+VNK E+AVRITHI
Sbjct: 162 -----RHTSFASVDVMPEIDDDIEIDIKPE-DLKIDTFRSGGAGGQHVNKTESAVRITHI 215
Query: 198 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 257
PTG V C ERSQ +N+ A+ L+AKL I +E++ E+ +IRG + WG QIR+Y
Sbjct: 216 PTGTVVSCQNERSQQSNRNTAMKILRAKLFDIYQEEQQKELDKIRGSQKEIAWGSQIRSY 275
Query: 258 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+FHPY LVKD RT E ++ +VMDGEL+ FI +YLK
Sbjct: 276 IFHPYSLVKDHRTDVEVGNVQAVMDGELDEFINAYLK 312
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Query: 53 AQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKAL 112
AQ+TLQ L D+K+K + T + K DD +T+++L E D D L E + +K+ K L
Sbjct: 2 AQKTLQRLNDLKEKFDNFTLLEKKYDDLLTLIELCTETD--DEELRTELLNEMKDFKKQL 59
Query: 113 DQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
++ +L LLSG YD A++++ AGAGGT+AQ
Sbjct: 60 EKMKLQTLLSGKYDGRNAILTLHAGAGGTEAQ 91
>gi|320528516|ref|ZP_08029673.1| peptide chain release factor 2 [Solobacterium moorei F0204]
gi|320131102|gb|EFW23675.1| peptide chain release factor 2 [Solobacterium moorei F0204]
Length = 350
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ E+MP E+ ++++I ++DL+I RA G GGQ++NK ++AVR+THIP+G+TV
Sbjct: 194 HTSFASVEIMPEF-EDDLEIEIDDKDLDIITMRASGAGGQHINKTDSAVRMTHIPSGITV 252
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C +RSQ+ N+ L+ LK+KLL + + +RG+ EWG QIR+YVF PY
Sbjct: 253 FCQSQRSQIQNREACLNMLKSKLLQLKIRENEERAAAVRGEVKANEWGSQIRSYVFAPYT 312
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RTGHE ++ +VMDGE++ FI SYL+
Sbjct: 313 MVKDLRTGHEAGNVQAVMDGEIDGFIDSYLR 343
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 65/120 (54%), Gaps = 8/120 (6%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI---NLLTDFKTKMDDAVTI 83
L+ EK LAE A++ FW+++ +AQ+ ++ +K I + LTD ++ + +
Sbjct: 7 LEGKEKRLAENNALMAEADFWNDQKKAQKIIRESNQLKVLIETHHSLTDSFAELSEGIG- 65
Query: 84 VKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+L+ D L+ E + E K ++FE+ LLSGPYD +++ I GAGGT+A
Sbjct: 66 -ELSSSFDEDMNELISEEYT---ETMKKFEEFEIQVLLSGPYDNHNSILEIHPGAGGTEA 121
>gi|220929619|ref|YP_002506528.1| hypothetical protein Ccel_2206 [Clostridium cellulolyticum H10]
gi|219999947|gb|ACL76548.1| hypothetical protein Ccel_2206 [Clostridium cellulolyticum H10]
Length = 373
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 152/277 (54%), Gaps = 25/277 (9%)
Query: 26 GLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLLTDFKTKMDDAVT 82
GL QL+ L L ++ + +D + A TL A T+ +D + +L T+ +A
Sbjct: 102 GLVQLKNNLESLRLETLLTGPYD-KNNAILTLHAGAGGTEAQDWVQMLLRMFTRWGEAKG 160
Query: 83 I-VKLTEEMDSTDAGLLEEAASIIKE-----LNKALDQFELTQLLSGPYDKEGAVISITA 136
VK+ + +D +AG+ +I E L L ++ P+D G
Sbjct: 161 YEVKILDYLDGDEAGIKSVTIHVIGENAYGYLKSEKGVHRLVRI--SPFDSSGR------ 212
Query: 137 GAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITH 196
TSF+ +VMP L ++++++ I +DL I RA G GGQ++NK ++A+RITH
Sbjct: 213 ------RHTSFASLDVMPEL-DDTIEININPDDLRIDTYRASGAGGQHINKTDSAIRITH 265
Query: 197 IPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRN 256
IPTGV V C ERSQ NK A+ LKAKL + E ++ +I+ ++G + WG QIR+
Sbjct: 266 IPTGVVVSCQTERSQFQNKDTAMKMLKAKLFELKEREQKEKIEDLKGVQMDIAWGSQIRS 325
Query: 257 YVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
YVF PY LVKD RT +E ++ +VMDGEL+ FI +YL
Sbjct: 326 YVFCPYTLVKDHRTNYEEGNVDAVMDGELDGFINAYL 362
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 76/127 (59%), Gaps = 2/127 (1%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+EE+RAS + ++ E+AELE KA++ FW++ +Q+ LQ +K KI + ++
Sbjct: 18 LEEMRASLDIARISDEIAELEHKASEPEFWNDMENSQKILQKTKILKTKIERFNNITSQW 77
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
+D T+ +L ++ D ++ E + +L L+ L LL+GPYDK A++++ AG
Sbjct: 78 EDLFTLAELG--LEEQDESVIPEVGEGLVQLKNNLESLRLETLLTGPYDKNNAILTLHAG 135
Query: 138 AGGTDAQ 144
AGGT+AQ
Sbjct: 136 AGGTEAQ 142
>gi|395239462|ref|ZP_10417341.1| Peptide chain release factor RF2 [Lactobacillus gigeriorum CRBIP
24.85]
gi|394476369|emb|CCI87318.1| Peptide chain release factor RF2 [Lactobacillus gigeriorum CRBIP
24.85]
Length = 332
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 111/165 (67%), Gaps = 1/165 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ EV+P + ++S+ + I +DL I R+ G GGQ++NK +
Sbjct: 161 LVRISPFDAAKRRHTSFASVEVIPEV-DDSIKIDIDPKDLRIDVYRSSGAGGQHINKTSS 219
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PTG+ +RSQL N+ A++ LKAKL + EE++ E ++G+ + W
Sbjct: 220 AVRITHLPTGIVTTSQAQRSQLQNREMAMNELKAKLFHLEEEKKRQEKMALKGEQKENGW 279
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
G QIR+YVFHPY +VKD+RTG+ET+D VMDG+L+PFI +YL++
Sbjct: 280 GSQIRSYVFHPYNMVKDLRTGYETADTSGVMDGKLQPFIYAYLQW 324
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FW+++ AQ+ + +K+K + L + DD T ++L +E D L +E
Sbjct: 2 AEPDFWNDQENAQKLIGETNILKEKRDSLVELSDSFDDVRTALELIKE--DPDPELQQEI 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+ + +L + +EL LLSG YD A++ I GAGGT+A
Sbjct: 60 SDNLDDLQEKFKNYELDLLLSGEYDAHNALMEIHPGAGGTEA 101
>gi|421298222|ref|ZP_15748911.1| peptide chain release factor 2 [Streptococcus pneumoniae GA60080]
gi|395903494|gb|EJH14424.1| peptide chain release factor 2 [Streptococcus pneumoniae GA60080]
Length = 325
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + ++++A+E+ ++G + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGKKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E D + +E + +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DESVHDELVAQL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 AELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|418157053|ref|ZP_12793769.1| peptide chain release factor 2 [Streptococcus pneumoniae GA16833]
gi|353823501|gb|EHE03675.1| peptide chain release factor 2 [Streptococcus pneumoniae GA16833]
Length = 273
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 120 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 178
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + ++++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 179 QSTVDRTQYGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 238
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 239 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 273
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +E + + EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 1 MHDELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 48
>gi|377809277|ref|YP_005004498.1| peptide chain release factor 2 [Pediococcus claussenii ATCC
BAA-344]
gi|361056018|gb|AEV94822.1| peptide chain release factor 2 [Pediococcus claussenii ATCC
BAA-344]
Length = 332
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 105/153 (68%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L +ES++V I +DL + R+ G GGQ++NK +AVRITH+PTG+
Sbjct: 174 HTSFASVDVMPEL-DESVEVNINPDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGIVA 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQL N+ A+S LKAKL + EE++A E + G + WG QIR+YVFHPY
Sbjct: 233 ASQAERSQLQNRATAMSMLKAKLFELEEEKKAQEKAALEGIQLDIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT ET+++ VMDG+L+ FI +YL++K
Sbjct: 293 MVKDHRTNFETANVQGVMDGDLDGFINAYLQWK 325
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+S FW++ EAQ + +K+K + + +++ ++L E DA + +
Sbjct: 2 AESDFWNDSVEAQALIDQNNILKEKYDNFERLQKHVENLEVTLELLES--EPDAEMQADL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ I+E NK L + L LL+GPYD A++ I GAGGT++Q
Sbjct: 60 EAEIEETNKLLRDYRLGLLLNGPYDANNAILEIHPGAGGTESQ 102
>gi|257870245|ref|ZP_05649898.1| peptide chain release factor 2 [Enterococcus gallinarum EG2]
gi|357050511|ref|ZP_09111709.1| peptide chain release factor 2 [Enterococcus saccharolyticus 30_1]
gi|257804409|gb|EEV33231.1| peptide chain release factor 2 [Enterococcus gallinarum EG2]
gi|355381164|gb|EHG28291.1| peptide chain release factor 2 [Enterococcus saccharolyticus 30_1]
Length = 329
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 106/153 (69%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L + ++D++I +DL+I RA G GGQ++NK E+AVRITHIPTG V
Sbjct: 174 HTSFCSVDVMPEL-DGAIDIEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+ LKAKL + E++ E +RG+ ++ WG QIR+YVFHPY
Sbjct: 233 ASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQMEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT ET ++ +VMDG+L+ FI +YLK K
Sbjct: 293 MVKDHRTNFETGNVQAVMDGDLDGFIDAYLKLK 325
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD +FWD+ +AQ+ + K+ + + ++ ++++ +E DA + E
Sbjct: 2 ADPTFWDDSEQAQKVINENNANKETYDQFNQLAEEFEELEVLLEMIQE--EPDAEMEAEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
A I+ LN+ + +EL+ LL PYD+ A+I + GAGGT++Q
Sbjct: 60 AERIQALNEKMGTYELSMLLDEPYDRNNAIIELHPGAGGTESQ 102
>gi|376261889|ref|YP_005148609.1| peptide chain release factor 2 [Clostridium sp. BNL1100]
gi|373945883|gb|AEY66804.1| peptide chain release factor 2 [Clostridium sp. BNL1100]
Length = 373
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 153/277 (55%), Gaps = 25/277 (9%)
Query: 26 GLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLLTDFKTKMDDAVT 82
GLQ L+ L L ++ + +D + A TL A T+ +D + +L T+ +A
Sbjct: 102 GLQLLKHNLESLRLETLLTGPYD-KNNAILTLHAGAGGTEAQDWVQMLLRMFTRWGEAKG 160
Query: 83 I-VKLTEEMDSTDAGLLEEAASIIKE-----LNKALDQFELTQLLSGPYDKEGAVISITA 136
VK+ + +D +AG+ +I E L L ++ P+D G
Sbjct: 161 YEVKVLDYLDGDEAGIKSVTIHVIGENAYGYLKSEKGVHRLVRI--SPFDSSGR------ 212
Query: 137 GAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITH 196
TSF+ A+VMP L ++++++ I +DL I RA G GGQ++NK ++A+RITH
Sbjct: 213 ------RHTSFASADVMPEL-DDTIEININPDDLRIDTYRASGAGGQHINKTDSAIRITH 265
Query: 197 IPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRN 256
IPTGV V C ERSQ NK A+ LKAKL + E ++ +I+ ++G ++ WG QIR+
Sbjct: 266 IPTGVVVSCQTERSQFQNKDTAMKMLKAKLFELKEREQKEKIEDLKGVQMEIAWGSQIRS 325
Query: 257 YVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
YVF PY LVKD RT +E ++ +VMDGEL+ I +YL
Sbjct: 326 YVFCPYTLVKDHRTNYEEGNVDAVMDGELDGIINAYL 362
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 76/127 (59%), Gaps = 2/127 (1%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+EE+RAS + ++ E+AELE KA++ FW++ +Q+ LQ +K KI + ++
Sbjct: 18 LEEMRASLDIARISDEIAELEHKASEPEFWNDMENSQKILQKTKILKTKIERFNNITSQW 77
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
+D T+ +L ++ D ++ E ++ L L+ L LL+GPYDK A++++ AG
Sbjct: 78 EDLFTLSELG--LEEQDESVIPEVGEGLQLLKHNLESLRLETLLTGPYDKNNAILTLHAG 135
Query: 138 AGGTDAQ 144
AGGT+AQ
Sbjct: 136 AGGTEAQ 142
>gi|282856730|ref|ZP_06265994.1| peptide chain release factor 2 [Pyramidobacter piscolens W5455]
gi|282585426|gb|EFB90730.1| peptide chain release factor 2 [Pyramidobacter piscolens W5455]
Length = 252
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 104/152 (68%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V P LP++ +DV+I EDL I R+ G GGQ+VN ++AVRITH+PTG+ V
Sbjct: 100 HTSFASVDVSPQLPDD-VDVEIAPEDLRIDTYRSSGAGGQHVNMTDSAVRITHLPTGIVV 158
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ NK A+S LK+KL EQR +E+ + G+ ++ WG QIR+YV PY
Sbjct: 159 SCQNERSQHMNKATAMSVLKSKLYQRELEQRQAEMNALAGEKKESTWGSQIRSYVLQPYT 218
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
LVKD RTG ET ++ V+DG L+PFI +YL++
Sbjct: 219 LVKDHRTGEETGNVGGVLDGGLDPFILAYLRW 250
>gi|374587319|ref|ZP_09660411.1| bacterial peptide chain release factor 2 (bRF-2) [Leptonema illini
DSM 21528]
gi|373876180|gb|EHQ08174.1| bacterial peptide chain release factor 2 (bRF-2) [Leptonema illini
DSM 21528]
Length = 391
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 108/151 (71%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ + P L ++S++V I E+DL + RA G GGQ+VNK ++A+RITHIPTG+ V
Sbjct: 226 HTSFASVHISPEL-DDSVNVLIEEKDLRVDTYRASGAGGQHVNKTDSAIRITHIPTGIVV 284
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ N+ +A+ LKA+L + + ++ +E + G+ WG QIR+YV HPYK
Sbjct: 285 QCQNERSQHKNRDRAMKMLKARLYEVEKAKKEAEAESKAGEKKDVAWGSQIRSYVMHPYK 344
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD+RTG +TSD+ SVM+G+L+PF+ SYLK
Sbjct: 345 MVKDLRTGEQTSDVESVMNGDLDPFVISYLK 375
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 68/123 (55%), Gaps = 17/123 (13%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDD-----AVTIV 84
L EL+++E + + FWD+ +A+E + + ++ K + + ++DD A+TI
Sbjct: 41 LRVELSDMENRMSQPDFWDDADQAREISRQKSALEKKTEPWVELRREVDDFGDLIALTID 100
Query: 85 KLTEEMDSTDAGLLEEAASIIKELNKALDQF---ELTQLLSGPYDKEGAVISITAGAGGT 141
+L EE E AS+ K+ + +QF +L++ L G D A+++I++GAGGT
Sbjct: 101 ELGEE---------EGFASLSKDFARMKEQFDGLQLSEALLGEDDGRNALVTISSGAGGT 151
Query: 142 DAQ 144
++Q
Sbjct: 152 ESQ 154
>gi|358068069|ref|ZP_09154539.1| peptide chain release factor 2 [Johnsonella ignava ATCC 51276]
gi|356693613|gb|EHI55284.1| peptide chain release factor 2 [Johnsonella ignava ATCC 51276]
Length = 339
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF +VMP + EE +D+ + +D++I RA G GGQ+VNK +AVR+THIPTGV V
Sbjct: 174 QTSFVSCDVMPDI-EEDIDIDLNPDDIKIDTFRASGAGGQHVNKTSSAVRMTHIPTGVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL NK KAL LKAKLL+I ++ ++ IRGD + W QIR+YV PY
Sbjct: 233 QCQNERSQLRNKEKALQILKAKLLIIKQQANVEKLSDIRGDVKEIGWSSQIRSYVMQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
+VKD RT E+S++ +V+DG ++ FI +YL +
Sbjct: 293 MVKDHRTACESSNVSAVLDGGIDDFISAYLTW 324
>gi|363893323|ref|ZP_09320460.1| peptide chain release factor 2 [Eubacteriaceae bacterium CM2]
gi|361961421|gb|EHL14622.1| peptide chain release factor 2 [Eubacteriaceae bacterium CM2]
Length = 344
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 163/331 (49%), Gaps = 71/331 (21%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
+ E+ + E+ A D FW++R AQ+ L+ ++ K+ +K++D + +L E
Sbjct: 12 QDEILKEEINAQD--FWNDRENAQKILKKSKQIQTKLESYNTASSKLEDLEVLFELATED 69
Query: 91 DSTDAGLLEEAASI---IKEL------------NKA----------LDQFELTQLLSGPY 125
++ + L++E + IK+L N A LD + TQ+L Y
Sbjct: 70 ENLEEELIKEIDDVQADIKQLSLQVLLSGEYDANNAILSVHSGTGGLDAQDWTQMLLRMY 129
Query: 126 ------------------DKEGAVISITAGAGGTDA------------------------ 143
D E + S T G +A
Sbjct: 130 TRFAQNMGFKIYYIDIQQDPEAGIKSATLHIEGDNAYGYLKCEKGVHRLVRISPFDSSGK 189
Query: 144 -QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVT 202
TSF+ +V+P L ++S+ + I +DL+I R+ G GGQ+VNK E+A+RITHIPTGV
Sbjct: 190 RHTSFASVDVLPEL-DDSIKIDINPKDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGVV 248
Query: 203 VRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPY 262
V+C ERSQ +NK A+ L AKL+ + E + +I+ I+G WG QIR+YVF PY
Sbjct: 249 VQCQNERSQFSNKDTAMKMLMAKLIELKELEHKDKIEDIQGKYSLIAWGSQIRSYVFQPY 308
Query: 263 KLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD RT E +I SVMDG++ PFI SYL
Sbjct: 309 TMVKDHRTNFEIGNITSVMDGDIMPFINSYL 339
>gi|335044896|ref|ZP_08537919.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 108
str. F0425]
gi|363896223|ref|ZP_09322777.1| peptide chain release factor 2 [Oribacterium sp. ACB7]
gi|333758682|gb|EGL36239.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 108
str. F0425]
gi|361961231|gb|EHL14449.1| peptide chain release factor 2 [Oribacterium sp. ACB7]
Length = 378
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 110/162 (67%), Gaps = 4/162 (2%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF +VMP + E +D+++ EED+++ RA G GGQ++NK +AVR+ HIPTG V
Sbjct: 214 QTSFVSCDVMPDI-ETDIDIEVREEDIKMEVFRASGAGGQHINKTSSAVRLIHIPTGFVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C EERSQ+ NK KA+ LK KL + +E++ +++ IRG+ WG QIR+YV PY+
Sbjct: 273 ACQEERSQIQNKNKAMQMLKTKLYLKEKEEQEAKLAGIRGEVKDNGWGSQIRSYVLQPYR 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASD 305
+VKD+RTG ET + +V+DG+++ FI +YLK+ M L D
Sbjct: 333 MVKDLRTGEETGNTDAVLDGDIDRFITAYLKW---MQLGCPD 371
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M +F + ++ + ++++ + L +K +AEL+ + FW + + +
Sbjct: 1 MIEFEQFKSELNTKEEPLKQLEQALDLDNKKKRIAELDRMMEEPDFWADAEKGNKLSTEA 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+ +KD++ K +D ++++ +E DA ++ E ++ ++ L+ T L
Sbjct: 61 SHLKDEVEGFLKLKEDYEDIDALIQMGKE--EEDASVIPEIKEMLARFSEELENMNTTLL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDA 143
LSG YD ++ + AGAGGT+A
Sbjct: 119 LSGEYDSMNVILRLNAGAGGTEA 141
>gi|402838400|ref|ZP_10886907.1| peptide chain release factor 2 [Eubacteriaceae bacterium OBRC8]
gi|402272877|gb|EJU22088.1| peptide chain release factor 2 [Eubacteriaceae bacterium OBRC8]
Length = 344
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 163/331 (49%), Gaps = 71/331 (21%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
+ E+ + E+ A D FW++R AQ+ L+ ++ K+ +K++D + +L E
Sbjct: 12 QDEILKEEINAQD--FWNDRENAQKILKKSKQIQTKLESYNTASSKLEDLEVLFELATED 69
Query: 91 DSTDAGLLEEAASI---IKEL------------NKA----------LDQFELTQLLSGPY 125
++ + L++E + IK+L N A LD + TQ+L Y
Sbjct: 70 ENLEEELIKEIDDVQADIKQLSLQVLLSGEYDANNAILSVHSGTGGLDAQDWTQMLLRMY 129
Query: 126 ------------------DKEGAVISITAGAGGTDA------------------------ 143
D E + S T G +A
Sbjct: 130 TRFAQNMGFKIYYIDIQQDPEAGIKSATLHIEGDNAYGYLKCEKGVHRLVRISPFDSSGK 189
Query: 144 -QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVT 202
TSF+ +V+P L ++S+ + I +DL+I R+ G GGQ+VNK E+A+RITHIPTGV
Sbjct: 190 RHTSFASVDVLPEL-DDSIKIDINPKDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGVV 248
Query: 203 VRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPY 262
V+C ERSQ +NK A+ L AKL+ + E + +I+ I+G WG QIR+YVF PY
Sbjct: 249 VQCQNERSQFSNKDTAMKMLMAKLIELKELEHKDKIEDIQGKYSLIAWGSQIRSYVFQPY 308
Query: 263 KLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD RT E +I SVMDG++ PFI SYL
Sbjct: 309 TMVKDHRTNFEIGNITSVMDGDIMPFINSYL 339
>gi|332983173|ref|YP_004464614.1| peptide chain release factor 2 (bRF-2) [Mahella australiensis 50-1
BON]
gi|332700851|gb|AEE97792.1| bacterial peptide chain release factor 2 (bRF-2) [Mahella
australiensis 50-1 BON]
Length = 353
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++ V+I EDL+I R+ G GGQ+VNK E+A+RITHIPTG+ V
Sbjct: 196 HTSFASVDVMPELDDDE-GVEINPEDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGIVV 254
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ +NK A+ LKAKLL + E++ ++I I+G+ + EWG QIR+Y+F PY
Sbjct: 255 QCQNERSQHSNKETAMKMLKAKLLELKEQEEQAKISDIKGELKRIEWGSQIRSYIFQPYT 314
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT E ++ +VMDG+++ FI YLK
Sbjct: 315 MVKDHRTNAEIGNVNAVMDGDIDLFISEYLK 345
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 70/115 (60%), Gaps = 2/115 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+E+ LE + AD SFW + +Q+ Q + +KDK+ L + K +D T+ L E
Sbjct: 12 MEEEIKNLEKQMADPSFWSDMERSQKVNQRIKALKDKLQNLRAVEQKWEDLRTLADLGRE 71
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D DA ++ E A+ + L K +++ + LLSGPYD+ A++++ AGAGGT+AQ
Sbjct: 72 ED--DASIVGEVAAELASLRKEVERLRIETLLSGPYDRNNAIVTLHAGAGGTEAQ 124
>gi|294790676|ref|ZP_06755834.1| peptide chain release factor 2 [Scardovia inopinata F0304]
gi|294458573|gb|EFG26926.1| peptide chain release factor 2 [Scardovia inopinata F0304]
Length = 370
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 118/168 (70%), Gaps = 4/168 (2%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLL-PEESMDVQIPEEDLEISFSRAGGKGGQNVNKVE 189
++ I+ + QTSF+ EV+PL+ P + +D IP+ D+ + + G GGQ VN
Sbjct: 200 LVRISPFDNNSRRQTSFAAVEVIPLVEPTDHID--IPDSDIRVDTYMSHGPGGQGVNTTY 257
Query: 190 TAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAE 249
+AVRITHIPTG+ V +ERSQ+ N+ A+S L+++LLV+ +E+ A++ K++ GD VKA
Sbjct: 258 SAVRITHIPTGIVVTMQDERSQIQNRAAAMSVLQSRLLVMKQEEEAAKKKELAGD-VKAS 316
Query: 250 WGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKY 297
WG Q+R+YV HPY++VKD+RTG+ETSD V DG+++ FI + +++++
Sbjct: 317 WGDQMRSYVLHPYQMVKDLRTGYETSDPQKVFDGDIDAFIDAGIRWRH 364
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
Y+ +D+ A + E I ++ G Q L +++ LE +A+ WD++ AQ L+ +
Sbjct: 4 YDFTQDLSEARSKFETISSALGRQNLAEKIVSLEKEASAPGLWDDQENAQLVTSRLSQTQ 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ L D + ++DD T+ +L E D D+ EA + + L E+ LL G
Sbjct: 64 NEAKRLDDLERRLDDIATLYELGSEEDDQDSKA--EAEKELTAVRSDLSDLEIQTLLDGE 121
Query: 125 YDKEGAVISITAGAGGTDA 143
YD AV++I +GAGG DA
Sbjct: 122 YDNRAAVVTIRSGAGGVDA 140
>gi|300869767|ref|YP_003784638.1| peptide chain release factor RF-2 [Brachyspira pilosicoli 95/1000]
gi|404476074|ref|YP_006707505.1| peptide chain release factor RF-0 [Brachyspira pilosicoli B2904]
gi|434382084|ref|YP_006703867.1| peptide chain release factor RF-2 [Brachyspira pilosicoli WesB]
gi|300687466|gb|ADK30137.1| peptide chain release factor RF-2 [Brachyspira pilosicoli 95/1000]
gi|404430733|emb|CCG56779.1| peptide chain release factor RF-2 [Brachyspira pilosicoli WesB]
gi|404437563|gb|AFR70757.1| peptide chain release factor RF-0 [Brachyspira pilosicoli B2904]
Length = 312
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 107/164 (65%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF VMP + +E ++V+I + DL I RA G GGQ+VNK +
Sbjct: 145 LVRISPFDANAKRHTSFVAVSVMPDI-DEDIEVEINQADLRIDTYRASGAGGQHVNKTSS 203
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
A+RITHIPT + V+C ERSQ NK A+ LKAKL + +E+ E ++I G+ W
Sbjct: 204 AIRITHIPTNIVVQCQAERSQHNNKDMAMKMLKAKLYQLEKEKLDKEKQKIAGEKTDIAW 263
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIR+YVF PY++VKD+RTGHET ++ SVMDG ++ FI +YLK
Sbjct: 264 GNQIRSYVFQPYQMVKDLRTGHETGNMNSVMDGNIDEFISAYLK 307
>gi|403508387|ref|YP_006640025.1| peptide chain release factor 2 [Nocardiopsis alba ATCC BAA-2165]
gi|402801847|gb|AFR09257.1| peptide chain release factor 2 [Nocardiopsis alba ATCC BAA-2165]
Length = 370
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 109/155 (70%), Gaps = 2/155 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G +V+P++ E+S ++I E +L + R+ G GGQ VN ++AVRITH+PTG+ V
Sbjct: 213 QTSFAGVDVVPMV-EQSDHIEIDETELRVDVYRSSGPGGQGVNTTDSAVRITHMPTGIVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQL NK A+S L+AKLL ++ + + ++RGD+V + WG Q+RNYV HPY+
Sbjct: 272 SCQNERSQLQNKATAMSMLQAKLLARKRQEEQAALDELRGDSVSS-WGTQMRNYVLHPYQ 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
VKDVRTG ET + V+DG+++ FI + +++ S
Sbjct: 331 SVKDVRTGMETGNTSGVLDGDIDGFIDAEIRWMRS 365
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 67/117 (57%), Gaps = 2/117 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L+ ++ ++AEL ++AD W ++ AQ+ + L+ ++ +N + ++DD + +L
Sbjct: 26 LEAMQTQIAELREQSADPELWADQDNAQKVTRRLSTLESMVNKVGGIGRRLDDLGVLYEL 85
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
E D D EA +++L K + + E+ LL+GP+D+ A+++I + AGG DA
Sbjct: 86 AEAEDDPDT--RAEADRELEQLRKEIGELEVRTLLNGPHDEREAIVTINSQAGGVDA 140
>gi|315641246|ref|ZP_07896323.1| peptide chain release factor RF2 [Enterococcus italicus DSM 15952]
gi|315483013|gb|EFU73532.1| peptide chain release factor RF2 [Enterococcus italicus DSM 15952]
Length = 340
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 107/153 (69%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++++D++I +DL+I RA G GGQ++NK E+AVRITHIPTG V
Sbjct: 185 HTSFCSVDVMPEL-DDTIDIEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVV 243
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+ LKAKL + E++ E +RG+ ++ WG QIR+YVFHPY
Sbjct: 244 ASQAQRSQLKNREQAMGMLKAKLYQLEVEKQEQEAAALRGEQMEIGWGSQIRSYVFHPYS 303
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT ET ++ +VMDG+++ FI +YLK K
Sbjct: 304 MVKDHRTNFETGNVQAVMDGDIDGFIDAYLKQK 336
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++AE E + A+ FWD+ AQ+ + K+ + + ++++ ++++ +E
Sbjct: 1 MEEDIAEAENRMAEPGFWDDTQSAQKVINENNSNKEAFDQFHELADELEELEVLLEMIQE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D + +E A+ EL + +EL LL GPYD A+I + GAGGT++Q
Sbjct: 61 --EPDDEMEQELATRASELLGKMSAYELAMLLDGPYDHNNAIIELHPGAGGTESQ 113
>gi|194468150|ref|ZP_03074136.1| peptide chain release factor 2 [Lactobacillus reuteri 100-23]
gi|194453003|gb|EDX41901.1| peptide chain release factor 2 [Lactobacillus reuteri 100-23]
Length = 332
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++S++V I DL + R+ G GGQ++NK+E+AVRITHIPTG+
Sbjct: 174 HTSFASVDVMPEL-DDSVEVDIDPSDLRVDTFRSSGAGGQHINKIESAVRITHIPTGIVT 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQL N++ A++ LK+KL + EE++A + +I G+ + WG QIR+YVFHPY
Sbjct: 233 SSQAERSQLQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKD RTG+ET + +VMDG+L+PFI ++L++K S
Sbjct: 293 LVKDNRTGYETHNGQAVMDGDLDPFIDAFLQWKLS 327
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL-TEEMDSTDAGLLEE 100
A FW++ +AQ+ + +K+K + + + ++ D T ++L T E D L +
Sbjct: 2 AQPDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQIGDLETSIELLTVEPDDD---LQRD 58
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ KAL+Q+ LTQLL G YD + A++ I GAGGT+AQ
Sbjct: 59 FEVSFTKTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQ 102
>gi|395242683|ref|ZP_10419679.1| Peptide chain release factor 2 [Lactobacillus pasteurii CRBIP
24.76]
gi|394479931|emb|CCI85919.1| Peptide chain release factor 2 [Lactobacillus pasteurii CRBIP
24.76]
Length = 332
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 111/165 (67%), Gaps = 1/165 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ EV+P + ++S+D++I +DL I R+ G GGQ++NK +
Sbjct: 161 LVRISPFDSAKRRHTSFASVEVIPEV-DDSIDIEIDPKDLRIDVFRSSGAGGQHINKTSS 219
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PTG +RSQL N+ A++ LKAKL + EE++ E ++G+ + W
Sbjct: 220 AVRITHLPTGFVTTSQAQRSQLQNRETAMNELKAKLFHLEEEKKRQEKMALKGEQKEIGW 279
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
G QIR+YVFHPY +VKD+RT +ET+D VMDG+L+PFI +YL++
Sbjct: 280 GSQIRSYVFHPYNMVKDLRTNYETADTSGVMDGKLQPFIYAYLQW 324
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A FW+++ AQ+ + +K+K + L + +D T ++L + D L EE
Sbjct: 2 AQPDFWNDQEAAQKLISENNRLKEKRDSLMNLVAGYEDEQTALELLKA--DPDPELQEEI 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+ + L + +EL LL+G YD A++ I GAGGT+A
Sbjct: 60 ETELASLQEKFHNYELDLLLAGEYDDHNALMEIHPGAGGTEA 101
>gi|325287611|ref|YP_004263401.1| hypothetical protein Celly_2713 [Cellulophaga lytica DSM 7489]
gi|324323065|gb|ADY30530.1| hypothetical protein Celly_2713 [Cellulophaga lytica DSM 7489]
Length = 365
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 105/150 (70%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL ++S++++I D+EI+ +R+ G GGQNVNKVET V++TH PTG+ +
Sbjct: 208 HTSFASVYVYPL-ADDSIEIEINPADIEITTARSSGAGGQNVNKVETKVQLTHKPTGIQI 266
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C++ RSQ N+ A+ LK++L I ++ +I +K EWG QIRNYV HPYK
Sbjct: 267 SCSDSRSQHDNRATAMKMLKSQLYEIELRKKQEARSEIEAGKMKIEWGSQIRNYVMHPYK 326
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRT ET ++ +VMDG+++PF+K+YL
Sbjct: 327 LVKDVRTAEETGNVDAVMDGQIDPFLKAYL 356
>gi|161507200|ref|YP_001577154.1| peptide chain release factor 2 [Lactobacillus helveticus DPC 4571]
gi|417020651|ref|ZP_11947320.1| peptide chain release factor 2 [Lactobacillus helveticus MTCC 5463]
gi|160348189|gb|ABX26863.1| Peptide chain release factor 2 [Lactobacillus helveticus DPC 4571]
gi|328461868|gb|EGF34090.1| peptide chain release factor 2 [Lactobacillus helveticus MTCC 5463]
Length = 332
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ EV+P + + P+ DL I R+ G GGQ++NK +
Sbjct: 161 LVRISPFDAAKRRHTSFASVEVIPEIDDSIKIDIDPK-DLRIDVYRSSGAGGQHINKTSS 219
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PTG+ +RSQL N+ A++ L+AKL + EE++ + + ++GD + W
Sbjct: 220 AVRITHLPTGIVTTSQAQRSQLQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGW 279
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
G QIR+YVFHPY LVKD+RTG+ET+D+ VMDG+L+PFI SYL++
Sbjct: 280 GSQIRSYVFHPYNLVKDLRTGYETADVNGVMDGKLQPFIYSYLQW 324
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAAS 103
+ FWD++ AQ+ + +K+K + + +D +T ++L DA L +E +
Sbjct: 4 TGFWDDQEGAQKLISDNNLLKEKRDSFLKLQQDYEDELTALELLRA--EPDADLQQEVET 61
Query: 104 IIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+K+L +A +EL LLSG YD A++ I GAGGT+A
Sbjct: 62 DLKDLQEAFHNYELDLLLSGKYDSHNALLEIHPGAGGTEA 101
>gi|222100137|ref|YP_002534705.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359]
gi|221572527|gb|ACM23339.1| Peptide chain release factor 2 [Thermotoga neapolitana DSM 4359]
Length = 218
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 107/152 (70%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V+P + E+ + ++I EDL+I RA G GGQ+VNK E+AVRITHIPTG+ V
Sbjct: 62 HTSFASVNVIPEI-EDDVHIEIKPEDLKIETFRASGHGGQHVNKTESAVRITHIPTGIVV 120
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ NK AL LKA+L + E++ EI++I+G+ WG QIR+YVFHPY
Sbjct: 121 TCQNERSQHQNKQTALKILKARLYQLELEKKRKEIQEIQGELKDISWGNQIRSYVFHPYT 180
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
LVKD RTG ETS++ +VMDG+++ FI++ L Y
Sbjct: 181 LVKDHRTGVETSNVDAVMDGDIDIFIEAELVY 212
>gi|403515420|ref|YP_006656240.1| peptide chain release factor 2 [Lactobacillus helveticus R0052]
gi|403080858|gb|AFR22436.1| peptide chain release factor 2 [Lactobacillus helveticus R0052]
Length = 331
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ EV+P + + P+ DL I R+ G GGQ++NK +
Sbjct: 160 LVRISPFDAAKRRHTSFASVEVIPEIDDSIKIDIDPK-DLRIDVYRSSGAGGQHINKTSS 218
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PTG+ +RSQL N+ A++ L+AKL + EE++ + + ++GD + W
Sbjct: 219 AVRITHLPTGIVTTSQAQRSQLQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGW 278
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
G QIR+YVFHPY LVKD+RTG+ET+D+ VMDG+L+PFI SYL++
Sbjct: 279 GSQIRSYVFHPYNLVKDLRTGYETADVNGVMDGKLQPFIYSYLQW 323
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD++ AQ+ + +K+K + + +D +T ++L DA L +E + +
Sbjct: 5 FWDDQEGAQKLISDNNLLKEKRDSFLKLQQDYEDELTALELLRA--EPDADLQQEVETDL 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
K+L +A +EL LLSG YD A++ I GAGGT+A
Sbjct: 63 KDLQEAFHNYELDLLLSGKYDSHNALLEIHPGAGGTEA 100
>gi|260102492|ref|ZP_05752729.1| peptide chain release factor RF2 [Lactobacillus helveticus DSM
20075]
gi|260083697|gb|EEW67817.1| peptide chain release factor RF2 [Lactobacillus helveticus DSM
20075]
Length = 332
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P + + P+ DL I R+ G GGQ++NK +AVRITH+PTG+
Sbjct: 174 HTSFASVEVIPEIDDSIKIDIDPK-DLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVT 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ A++ L+AKL + EE++ + + ++GD + WG QIR+YVFHPY
Sbjct: 233 TSQAQRSQLQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYN 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
LVKD+RTG+ET+D+ VMDG+L+PFI SYL++
Sbjct: 293 LVKDLRTGYETADVNGVMDGKLQPFIYSYLQW 324
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAAS 103
+ FWD++ AQ+ + +K+K + + +D +T ++L DA L +E +
Sbjct: 4 TGFWDDQEGAQKLISDNNLLKEKRDSFLKLQQDYEDELTALELLRA--EPDADLQQEVET 61
Query: 104 IIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+K+L +A +EL LLSG YD A++ I GAGGT+A
Sbjct: 62 DLKDLQEAFHNYELDLLLSGKYDSHNALLEIHPGAGGTEA 101
>gi|167772028|ref|ZP_02444081.1| hypothetical protein ANACOL_03402 [Anaerotruncus colihominis DSM
17241]
gi|167665826|gb|EDS09956.1| peptide chain release factor 2 [Anaerotruncus colihominis DSM
17241]
Length = 374
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 103/151 (68%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P LP++ V+I ED+++ R+ G GGQ++NK +AVR+THIPTG+ V
Sbjct: 214 HTSFASVEVLPELPDDH-SVEINPEDIKMDVFRSSGAGGQHINKTSSAVRLTHIPTGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ N+ + L AKL+ I E + + I +I+G+ ++ WG QIR+YVF PY
Sbjct: 273 SCQNERSQFQNREMCMKMLTAKLVEIKEREHLANINEIKGEQMQIAWGSQIRSYVFMPYT 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
L KD RTG E+ +I +VMDG+L+ FI +YLK
Sbjct: 333 LAKDHRTGFESGNINAVMDGDLDGFINAYLK 363
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 2/144 (1%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M F LR +EA ++E + G L ++LAELE + FW++ +Q+
Sbjct: 1 MLQFEELRLRLEAHRAELDEFAQAIGYDALRRKLAELEEQTTAPGFWNDVERSQKNQLET 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
V+ K+ DD +T++ L +E D + EA + ++ L+ +L+ L
Sbjct: 61 ARVRGKLEACDKLNALYDDTLTLIGLADE--ENDESVYSEALADVERFESDLETQKLSTL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
L+G YD A+++ AGAGGT+AQ
Sbjct: 119 LTGEYDANNAIMTFHAGAGGTEAQ 142
>gi|387759013|ref|YP_006065991.1| peptide chain release factor 2 [Streptococcus pneumoniae INV200]
gi|418199610|ref|ZP_12836057.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47976]
gi|419495051|ref|ZP_14034771.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47461]
gi|419514311|ref|ZP_14053939.1| peptide chain release factor 2 [Streptococcus pneumoniae
England14-9]
gi|421265785|ref|ZP_15716668.1| peptide chain release factor 2 [Streptococcus pneumoniae SPAR27]
gi|421267959|ref|ZP_15718831.1| peptide chain release factor 2 [Streptococcus pneumoniae SPAR95]
gi|301801602|emb|CBW34300.1| peptide chain release factor 2 [Streptococcus pneumoniae INV200]
gi|353866288|gb|EHE46190.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47976]
gi|379597415|gb|EHZ62218.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47461]
gi|379638801|gb|EIA03346.1| peptide chain release factor 2 [Streptococcus pneumoniae
England14-9]
gi|395868521|gb|EJG79638.1| peptide chain release factor 2 [Streptococcus pneumoniae SPAR27]
gi|395871383|gb|EJG82489.1| peptide chain release factor 2 [Streptococcus pneumoniae SPAR95]
Length = 325
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+T+IPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+ Q L ++K+ N + D+ ++ E D + +E + +
Sbjct: 6 FWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DESVHDELVAQL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 AELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|76798117|ref|ZP_00780371.1| peptide chain release factor 2 [Streptococcus agalactiae 18RS21]
gi|77405443|ref|ZP_00782536.1| peptide chain release factor 2 [Streptococcus agalactiae H36B]
gi|77408934|ref|ZP_00785658.1| peptide chain release factor 2 [Streptococcus agalactiae COH1]
gi|77411593|ref|ZP_00787935.1| peptide chain release factor 2 [Streptococcus agalactiae CJB111]
gi|209559087|ref|YP_002285559.1| peptide chain release factor 2 [Streptococcus pyogenes NZ131]
gi|76586525|gb|EAO63029.1| peptide chain release factor 2 [Streptococcus agalactiae 18RS21]
gi|77162378|gb|EAO73347.1| peptide chain release factor 2 [Streptococcus agalactiae CJB111]
gi|77172476|gb|EAO75621.1| peptide chain release factor 2 [Streptococcus agalactiae COH1]
gi|77175936|gb|EAO78712.1| peptide chain release factor 2 [Streptococcus agalactiae H36B]
gi|209540288|gb|ACI60864.1| Peptide chain release factor 2 [Streptococcus pyogenes NZ131]
Length = 326
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V++ ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFASVEVMPEL-DDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 231 SSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT E + + VMDGE+ FI +YLK++
Sbjct: 291 MVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 323
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K K + + + D+ ++++ +E DS L EE +
Sbjct: 6 FWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDEDDS----LKEELEENL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 MQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|333904674|ref|YP_004478545.1| peptide chain release factor 2 [Streptococcus parauberis KCTC
11537]
gi|333119939|gb|AEF24873.1| peptide chain release factor 2 [Streptococcus parauberis KCTC
11537]
gi|456370558|gb|EMF49454.1| Peptide chain release factor 2 [Streptococcus parauberis KRS-02109]
gi|457095857|gb|EMG26328.1| Peptide chain release factor 2 [Streptococcus parauberis KRS-02083]
Length = 327
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT E + + VMDG+++ FI +YLK++
Sbjct: 291 MVKDHRTSFEVAQVDKVMDGDIDGFIDAYLKWR 323
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
++ FW++ AQ+T Q L ++K K + D + ++ +++ +E DS L EE
Sbjct: 2 SEPDFWNDNIAAQKTSQELNELKVKFDTYHDMQNLSEETELYLEMLDEDDS----LQEEL 57
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +++L++ L +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 58 EASLEKLDQILSSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|15902709|ref|NP_358259.1| peptide chain release factor 2 [Streptococcus pneumoniae R6]
gi|116516272|ref|YP_816152.1| peptide chain release factor 2 [Streptococcus pneumoniae D39]
gi|182683675|ref|YP_001835422.1| peptide chain release factor 2 [Streptococcus pneumoniae CGSP14]
gi|303255830|ref|ZP_07341871.1| peptide chain release factor 2 [Streptococcus pneumoniae BS455]
gi|15458252|gb|AAK99469.1| Peptide chain release factor 2 [Streptococcus pneumoniae R6]
gi|116076848|gb|ABJ54568.1| peptide chain release factor 2 [Streptococcus pneumoniae D39]
gi|182629009|gb|ACB89957.1| peptide chain release factor 2 [Streptococcus pneumoniae CGSP14]
gi|302597214|gb|EFL64319.1| peptide chain release factor 2 [Streptococcus pneumoniae BS455]
Length = 329
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+T+IPTG+ V
Sbjct: 176 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 235 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 295 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+ Q L ++K+ N + D+ ++ E D
Sbjct: 1 MENKMTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DES 56
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +E + + EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 57 VHDELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 104
>gi|271962992|ref|YP_003337188.1| peptide chain release factor 2 [Streptosporangium roseum DSM 43021]
gi|270506167|gb|ACZ84445.1| peptide chain release factor 2 [Streptosporangium roseum DSM 43021]
Length = 372
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 167/339 (49%), Gaps = 72/339 (21%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L + K+L EL +AA W+++ AQ+ L+ ++ ++N + +++D + +L
Sbjct: 26 LDAIRKQLEELGEQAAAPDLWNDQEHAQKVTSKLSYLQGEVNRVESLGQRLEDLTVLYEL 85
Query: 87 T---------EEMD------STDAGLLE------------EAASIIKELNKALDQFELTQ 119
EE D +D G LE EA I +D + Q
Sbjct: 86 AAAEDDEETREEADRELASLKSDIGALEVRTLLSGEYDAREAVVTINSQAGGVDAADWAQ 145
Query: 120 LL------------------SGPYDKEGAVISIT------------AGAGGTDA------ 143
+L Y +E + S T G GT
Sbjct: 146 MLLRMYIRWAERKGYPTEVYETSYAEEAGIKSATFTVKAPYAYGTLRGEHGTHRLVRISP 205
Query: 144 -------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITH 196
QTSF+G +V+P++ E + + I E+DL + R+ G GGQ VN ++AVR+TH
Sbjct: 206 FDNQGRRQTSFAGVDVVPVV-ETTDHIDINEDDLRVDVYRSSGPGGQGVNTTDSAVRLTH 264
Query: 197 IPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRN 256
+PTG+ V C ERSQL NK A++ L++KLL ++ A+ + +IRG+A + WG QIRN
Sbjct: 265 LPTGIVVSCQNERSQLQNKATAMAVLQSKLLERKRQEEAAALNEIRGEATTS-WGTQIRN 323
Query: 257 YVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
YV HPY++VKD+RTG E + SV+DG+L+ FI+S +++
Sbjct: 324 YVLHPYQIVKDLRTGTEAGNPSSVLDGDLDEFIESEIRW 362
>gi|410594195|ref|YP_006950922.1| peptide chain release factor [Streptococcus agalactiae SA20-06]
gi|421531563|ref|ZP_15977944.1| peptide chain release factor 2 [Streptococcus agalactiae
STIR-CD-17]
gi|403643237|gb|EJZ04022.1| peptide chain release factor 2 [Streptococcus agalactiae
STIR-CD-17]
gi|410517834|gb|AFV71978.1| Peptide chain release factor [Streptococcus agalactiae SA20-06]
Length = 337
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V++ ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 183 HTSFASVEVMPEL-DDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 241
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 242 SSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 301
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT E + + VMDGE+ FI +YLK++
Sbjct: 302 MVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+E+A LE + + FW++ AQ+T Q L ++K K + + + D+ ++++ +E
Sbjct: 1 MEEEIALLENQMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
DS L EE + +L+K +D +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 DDS----LKEELEENLMQLDKIMDAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 111
>gi|410680209|ref|YP_006932611.1| peptide chain release factor 2 [Streptococcus pyogenes A20]
gi|409692798|gb|AFV37658.1| peptide chain release factor 2 [Streptococcus pyogenes A20]
Length = 326
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V++ ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFASVEVMPEL-DDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 231 SSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT E + + VMDGE+ FI +YLK++
Sbjct: 291 MVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 323
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K K + + + D+ ++++ +E DS L EE +
Sbjct: 6 FWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDEDDS----LKEELEENL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 MQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|395800716|ref|ZP_10479988.1| peptide chain release factor 2 [Flavobacterium sp. F52]
gi|395437124|gb|EJG03046.1| peptide chain release factor 2 [Flavobacterium sp. F52]
Length = 273
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 107/150 (71%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF V PL+ ++S+++ I D+EI+ SR+ G GGQNVNKVET V++ H PTG+ +
Sbjct: 116 HTSFVSVYVYPLV-DDSIEIDINPADIEITTSRSSGAGGQNVNKVETKVQLVHKPTGIQI 174
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C+E RSQ N+ +A+ L+++L I +++ ++ I +K EWG QIRNYV PYK
Sbjct: 175 QCSETRSQQDNRQRAMQMLRSQLYEIELKKQQAQRADIEASKMKIEWGSQIRNYVMQPYK 234
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRTG+ETSD+ VM+G ++PF+K+YL
Sbjct: 235 LVKDVRTGYETSDVDGVMNGNIDPFLKAYL 264
>gi|365156912|ref|ZP_09353199.1| peptide chain release factor 2 [Bacillus smithii 7_3_47FAA]
gi|363626379|gb|EHL77369.1| peptide chain release factor 2 [Bacillus smithii 7_3_47FAA]
Length = 327
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP EE ++++I EDL+I R+ G GGQ+VN ++AVRITH+PTG+ V
Sbjct: 174 HTSFVSCDVMPEFNEE-VEIEIRNEDLKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A++ LKAKL E++ E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQSERSQIQNRERAMNMLKAKLYQKKLEEQEKELAEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDGE++ FI +YL+
Sbjct: 293 MVKDHRTNTETGNVQAVMDGEIDMFIDAYLR 323
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW+++ +AQ + +KD +N D ++ L +E + T+ L E S +
Sbjct: 6 FWNDQQKAQAIINEANGLKDLVNEYKDLLETQENLDLTYDLVKEENDTE--LKAELESEL 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
++ K L+++EL LLS PYDK A++ + GAGGT++Q
Sbjct: 64 EDFTKRLNRYELELLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|21909990|ref|NP_664258.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS315]
gi|21904179|gb|AAM79061.1| putative peptide chain release factor 2 [Streptococcus pyogenes
MGAS315]
Length = 326
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V++ ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFASVEVMPEL-DDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 231 SSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT E + + VMDGE+ FI +YLK++
Sbjct: 291 MVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 323
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K K + + + D+ ++++ +E D L EE +
Sbjct: 6 FWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE----DDFLKEELEENL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+L+K +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 MQLDKITGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|421302565|ref|ZP_15753230.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17484]
gi|395903379|gb|EJH14311.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17484]
Length = 310
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+T+IPTG+ V
Sbjct: 157 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVV 215
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 216 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 275
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 276 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 310
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 17/89 (19%)
Query: 56 TLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQF 115
T + +++D++ +L DF L E D + +E + + EL+K + +
Sbjct: 14 TFHKMEELQDEVEILLDF------------LAE-----DESVHDELVAQLAELDKIMTSY 56
Query: 116 ELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 57 EMTLLLSEPYDHNNAILEIHPGSGGTEAQ 85
>gi|419523025|ref|ZP_14062606.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13723]
gi|379558564|gb|EHZ23597.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13723]
Length = 293
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 113/155 (72%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+T+IPTG+ V
Sbjct: 140 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVV 198
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 199 QSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 258
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 259 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 293
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D + +E + + EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 18 DESVHDELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 68
>gi|354807385|ref|ZP_09040854.1| peptide chain release factor 2 [Lactobacillus curvatus CRL 705]
gi|354514107|gb|EHE86085.1| peptide chain release factor 2 [Lactobacillus curvatus CRL 705]
Length = 332
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++S+D+++ EDL I R+ G GGQ++NK +AVR+TH+PTG+ V
Sbjct: 174 HTSFCSVDVMPEL-DDSIDIEVRTEDLRIDVFRSSGAGGQHINKTSSAVRLTHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ A++ LKAKL +E++A + I+G+ ++ WG QIR+YVFHPY
Sbjct: 233 SSQAQRSQLQNRETAMNMLKAKLYQKEQEEQAKKAAAIKGEQLEIGWGSQIRSYVFHPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +ET + +VMDG+L+PF+ +YL+++ S
Sbjct: 293 MVKDHRTDYETGNGQAVMDGDLDPFMYAYLQWQLS 327
>gi|421892749|ref|ZP_16323358.1| Peptide chain release factor 2; programmed frameshift-containing
[Streptococcus pyogenes NS88.2]
gi|379981496|emb|CCG27080.1| Peptide chain release factor 2; programmed frameshift-containing
[Streptococcus pyogenes NS88.2]
Length = 337
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V++ ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 183 HTSFASVEVMPEL-DDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 241
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 242 SSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 301
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT E + + VMDGE+ FI +YLK++
Sbjct: 302 MVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+E+A LE D FW++ AQ+T Q L ++K K + + + D+ ++++ +E
Sbjct: 1 MEEEIALLENHMTDPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
DS L EE + +L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 DDS----LKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 111
>gi|332522300|ref|ZP_08398552.1| peptide chain release factor 2 [Streptococcus porcinus str.
Jelinkova 176]
gi|332313564|gb|EGJ26549.1| peptide chain release factor 2 [Streptococcus porcinus str.
Jelinkova 176]
Length = 327
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 231 SSTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT E + + VMDG+++ FI +YLK++
Sbjct: 291 MVKDHRTNFEVAQVDKVMDGDIDGFIDAYLKWR 323
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K K + + + ++ +++ EE D + G LEE S++
Sbjct: 6 FWNDTISAQKTSQELNELKVKFDTFHNMENLSEETELYMEMLEE-DESVKGELEE--SLL 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
K L++ L +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 63 K-LDQILAAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|322374638|ref|ZP_08049152.1| peptide chain release factor 2 [Streptococcus sp. C300]
gi|321280138|gb|EFX57177.1| peptide chain release factor 2 [Streptococcus sp. C300]
Length = 329
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V
Sbjct: 176 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ +A+ L+ KL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 235 QSTVDRTQYGNRDRAMKMLQTKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 295 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E +S
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDE 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L+E+ + EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 LVEQ----LTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 104
>gi|427414371|ref|ZP_18904561.1| peptide chain release factor 2 [Veillonella ratti ACS-216-V-Col6b]
gi|425714747|gb|EKU77750.1| peptide chain release factor 2 [Veillonella ratti ACS-216-V-Col6b]
Length = 330
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP + ++++D+ + +D+ + RA G GGQ++NK ++A+R+THIPTGV V
Sbjct: 174 HTSFAAVDVMPEI-DDTVDIHLDMKDVRVDTYRASGAGGQHINKTDSAIRMTHIPTGVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ+ N+ +AL L+AKL + E++A ++I G EWG QIR+YVFHPY
Sbjct: 233 QCQSERSQIQNREQALKLLRAKLFELELEKQAELKEKIGGTYQAIEWGSQIRSYVFHPYN 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RTG ET +I SVMDG L+ F++ YLK
Sbjct: 293 LVKDHRTGVETGNIQSVMDGNLDAFMEGYLK 323
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLE 99
+D FW++ A+E Q T +KD + ++++D +KL EM D D +
Sbjct: 2 SDPEFWNDPDSAKEISQEATQLKDAVEGYKALVSEIED----LKLMLEMAIDEQDVSMES 57
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E + ++ + + +++ E+ LLSG YD A+++ AGAGGT+AQ
Sbjct: 58 ELKTSVEHITEEVERREVLLLLSGEYDTNNAILTFHAGAGGTEAQ 102
>gi|28896314|ref|NP_802664.1| peptide chain release factor 2 [Streptococcus pyogenes SSI-1]
gi|28811565|dbj|BAC64497.1| putative peptide chain release factor 2 [Streptococcus pyogenes
SSI-1]
Length = 337
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V++ ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 183 HTSFASVEVMPEL-DDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 241
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 242 SSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 301
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT E + + VMDGE+ FI +YLK++
Sbjct: 302 MVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+E+A LE + FW++ AQ+T Q L ++K K + + + D+ ++++ +E
Sbjct: 1 MEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D L EE + +L+K +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 ----DDFLKEELEENLMQLDKITGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 111
>gi|19745741|ref|NP_606877.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS8232]
gi|50913897|ref|YP_059869.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS10394]
gi|71903175|ref|YP_279978.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS6180]
gi|94988152|ref|YP_596253.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS9429]
gi|94992039|ref|YP_600138.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS2096]
gi|94993945|ref|YP_602043.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS10750]
gi|306827732|ref|ZP_07461004.1| peptide chain release factor RF2 [Streptococcus pyogenes ATCC
10782]
gi|383479712|ref|YP_005388606.1| peptide chain release factor protein (2) PrfB [Streptococcus
pyogenes MGAS15252]
gi|383493632|ref|YP_005411308.1| peptide chain release factor protein (2) PrfB [Streptococcus
pyogenes MGAS1882]
gi|386362389|ref|YP_006071720.1| peptide chain release factor 2 [Streptococcus pyogenes Alab49]
gi|417857260|ref|ZP_12502319.1| peptide chain release factor 2 [Streptococcus pyogenes HKU
QMH11M0907901]
gi|19747880|gb|AAL97376.1| putative peptide chain release factor 2 [Streptococcus pyogenes
MGAS8232]
gi|50902971|gb|AAT86686.1| Bacterial Peptide Chain Release Factor 2 [Streptococcus pyogenes
MGAS10394]
gi|71802270|gb|AAX71623.1| bacterial peptide chain release factor 2 [Streptococcus pyogenes
MGAS6180]
gi|94541660|gb|ABF31709.1| bacterial peptide chain release factor 2 (RF-2) [Streptococcus
pyogenes MGAS9429]
gi|94543542|gb|ABF33590.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus
pyogenes MGAS10270]
gi|94545547|gb|ABF35594.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus
pyogenes MGAS2096]
gi|94547453|gb|ABF37499.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus
pyogenes MGAS10750]
gi|304430050|gb|EFM33087.1| peptide chain release factor RF2 [Streptococcus pyogenes ATCC
10782]
gi|350276798|gb|AEQ24166.1| peptide chain release factor 2 [Streptococcus pyogenes Alab49]
gi|378927702|gb|AFC65908.1| peptide chain release factor protein (2) PrfB [Streptococcus
pyogenes MGAS15252]
gi|378929360|gb|AFC67777.1| peptide chain release factor protein (2) PrfB [Streptococcus
pyogenes MGAS1882]
gi|387934215|gb|EIK42328.1| peptide chain release factor 2 [Streptococcus pyogenes HKU
QMH11M0907901]
Length = 337
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V++ ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 183 HTSFASVEVMPEL-DDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 241
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 242 SSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 301
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT E + + VMDGE+ FI +YLK++
Sbjct: 302 MVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+E+A LE + FW++ AQ+T Q L ++K K + + + D+ ++++ +E
Sbjct: 1 MEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
DS L EE + +L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 DDS----LKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 111
>gi|15674713|ref|NP_268887.1| peptide chain release factor 2 [Streptococcus pyogenes SF370]
gi|71910343|ref|YP_281893.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS5005]
gi|13621834|gb|AAK33608.1| putative peptide chain release factor 2 [Streptococcus pyogenes M1
GAS]
gi|71853125|gb|AAZ51148.1| bacterial peptide chain release factor 2 [Streptococcus pyogenes
MGAS5005]
gi|395453579|dbj|BAM29918.1| peptide chain release factor 2 [Streptococcus pyogenes M1 476]
Length = 337
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V++ ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 183 HTSFASVEVMPEL-DDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 241
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 242 SSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 301
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT E + + VMDGE+ FI +YLK++
Sbjct: 302 MVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+E+A LE + FW++ AQ+T Q L ++K K + + + D+ ++++ +E
Sbjct: 1 MEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
DS L EE + +L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 DDS----LKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 111
>gi|76787098|ref|YP_329299.1| peptide chain release factor 2 [Streptococcus agalactiae A909]
gi|123602195|sp|Q3K2F4.1|RF2_STRA1 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|76562155|gb|ABA44739.1| peptide chain release factor 2, programmed frameshift
[Streptococcus agalactiae A909]
Length = 365
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V++ ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 211 HTSFASVEVMPEL-DDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 269
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 270 SSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 329
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT E + + VMDGE+ FI +YLK++
Sbjct: 330 MVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 362
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 79/138 (57%), Gaps = 4/138 (2%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+ + +++ R S L +LE+E+A LE + + FW++ AQ+T Q L ++K K
Sbjct: 6 IRQKIVENKEKLTSFRRSLDLDRLEEEIALLENQMTEPDFWNDNIAAQKTSQELNELKGK 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + + D+ ++++ +E DS L EE + +L+K + +E+T LLS PYD
Sbjct: 66 YDTFHNMQELSDETELLLEMLDEDDS----LKEELEENLMQLDKIMGAYEMTLLLSEPYD 121
Query: 127 KEGAVISITAGAGGTDAQ 144
A++ I G+GGT+AQ
Sbjct: 122 HNNAILEIHPGSGGTEAQ 139
>gi|25010633|ref|NP_735028.1| peptide chain release factor 2 [Streptococcus agalactiae NEM316]
gi|339301957|ref|ZP_08651031.1| peptide chain release factor RF2 [Streptococcus agalactiae ATCC
13813]
gi|406709049|ref|YP_006763775.1| peptide chain release factor 2 [Streptococcus agalactiae
GD201008-001]
gi|417004735|ref|ZP_11943374.1| peptide chain release factor 2 [Streptococcus agalactiae FSL
S3-026]
gi|421147673|ref|ZP_15607358.1| peptide chain release factor 2 [Streptococcus agalactiae GB00112]
gi|424049883|ref|ZP_17787434.1| peptide chain release factor 2 [Streptococcus agalactiae ZQ0910]
gi|23094987|emb|CAD46208.1| Unknown [Streptococcus agalactiae NEM316]
gi|319744591|gb|EFV96943.1| peptide chain release factor RF2 [Streptococcus agalactiae ATCC
13813]
gi|341577717|gb|EGS28124.1| peptide chain release factor 2 [Streptococcus agalactiae FSL
S3-026]
gi|389648606|gb|EIM70103.1| peptide chain release factor 2 [Streptococcus agalactiae ZQ0910]
gi|401685793|gb|EJS81788.1| peptide chain release factor 2 [Streptococcus agalactiae GB00112]
gi|406649934|gb|AFS45335.1| peptide chain release factor 2 [Streptococcus agalactiae
GD201008-001]
Length = 337
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V++ ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 183 HTSFASVEVMPEL-DDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 241
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 242 SSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 301
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT E + + VMDGE+ FI +YLK++
Sbjct: 302 MVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 68/115 (59%), Gaps = 4/115 (3%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+E+A LE + + FW++ AQ+T Q L ++K K + + + D+ ++++ +E
Sbjct: 1 MEEEIALLENQMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
DS L EE + +L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 61 DDS----LKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 111
>gi|403253475|ref|ZP_10919776.1| peptide chain release factor 2 [Thermotoga sp. EMP]
gi|402811009|gb|EJX25497.1| peptide chain release factor 2 [Thermotoga sp. EMP]
Length = 367
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 111/165 (67%), Gaps = 1/165 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ V+P + ++ +D++I EDL+I RA G GGQ VNK E+
Sbjct: 198 LVRISPFDAARRRHTSFASVNVIPEI-DDDVDIEIKPEDLKIETFRASGHGGQYVNKTES 256
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PTG+ V C ERSQ NK AL LKAKL + E++ EI++I+G+ W
Sbjct: 257 AVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKRREIQEIQGELKDISW 316
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
G QIR+Y+FHPY +VKD RTG ET+++ +VMDG+++ FI++ L Y
Sbjct: 317 GNQIRSYIFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAELVY 361
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
+ + +E + +++ + ++ KEL E+E K D S W+++ +A+E Q L +K
Sbjct: 4 FETKTKIEELEKKYKDVLSVVNEDEINKELEEVEKKLTDPSVWNDQKKAREYTQKLKRLK 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
+ L ++ +D ++L++E D + + I++EL A+ + EL +L+G
Sbjct: 64 NISEDLKRVRSLFEDLEVAIELSDE----DQEMAQHVEEIVQELEGAVKKLELEIILNGK 119
Query: 125 YDKEGAVISITAGAGGTDAQ 144
YD A +S+ GAGGT++Q
Sbjct: 120 YDPNNAYLSVHPGAGGTESQ 139
>gi|381188709|ref|ZP_09896269.1| peptide chain release factor 2 [Flavobacterium frigoris PS1]
gi|379649347|gb|EIA07922.1| peptide chain release factor 2 [Flavobacterium frigoris PS1]
Length = 295
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 107/150 (71%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL+ ++S+++ I D+EI+ SR+ G GGQNVNKVET V++ H PTG+ +
Sbjct: 137 HTSFASVYVYPLV-DDSIEIDINPADIEITTSRSSGAGGQNVNKVETKVQLVHKPTGIQI 195
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C+E RSQ N+ +A+ L+++L I +++ +E I +K EWG QIRNYV PYK
Sbjct: 196 QCSETRSQQDNRQRAMQMLRSQLYEIELKKQQAERANIEASKMKIEWGSQIRNYVMQPYK 255
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRTG ETSD+ VM+GE++ F+K+YL
Sbjct: 256 LVKDVRTGFETSDVDGVMNGEIDQFLKAYL 285
>gi|406576986|ref|ZP_11052607.1| peptide chain release factor 2 [Streptococcus sp. GMD6S]
gi|404460450|gb|EKA06713.1| peptide chain release factor 2 [Streptococcus sp. GMD6S]
Length = 325
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ T +R+Q N+ A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY
Sbjct: 231 QSTVDRTQYGNRDCAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 291 MVKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 325
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E +S L+E+ +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDELVEQ----L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EL+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 TELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|306820781|ref|ZP_07454406.1| peptide chain release factor RF2 [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551171|gb|EFM39137.1| peptide chain release factor RF2 [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 316
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 106/150 (70%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P L ++S+ V+I +DL++ R+ G GGQ+VNK E+A+RITHIPTGV V
Sbjct: 163 HTSFASVDVLPEL-DDSIKVEINPKDLKVDTYRSSGAGGQHVNKTESAIRITHIPTGVVV 221
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ++N+ A+ L AKL+ + E + +I+ I+G + WG QIR+YVF PY
Sbjct: 222 QCQNERSQISNRETAMKMLTAKLIELKELEHKDKIEDIQGKYSQIAWGSQIRSYVFQPYT 281
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD RT +E +I SVMDG++ PFI +YL
Sbjct: 282 MVKDHRTNYEVGNIGSVMDGDIMPFINAYL 311
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 74 KTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVIS 133
K K +D + + S D+ EE + L K D ++ +L+G YD A++S
Sbjct: 25 KNKFEDILVLFDFA----SQDSSFEEELSKETDNLEKITDSLSISIMLNGQYDANNAILS 80
Query: 134 ITAGAGGTDAQ 144
+ +G GG DAQ
Sbjct: 81 VHSGTGGLDAQ 91
>gi|213962528|ref|ZP_03390790.1| peptide chain release factor 2 [Capnocytophaga sputigena Capno]
gi|213954854|gb|EEB66174.1| peptide chain release factor 2 [Capnocytophaga sputigena Capno]
Length = 317
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 106/150 (70%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL +++++++I D+ R+ G GGQNVNKVETAVR+ H PTG+ +
Sbjct: 157 HTSFASVYVYPL-ADDTIEIEINPADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIII 215
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+E RSQL NK KAL LK++L I ++R ++ +I +K EWG QIRNYV HPYK
Sbjct: 216 ENSETRSQLDNKNKALQLLKSQLYEIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYK 275
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRT +E++D+ SVM+GEL+ F+K+YL
Sbjct: 276 LVKDVRTNYESTDVDSVMNGELDEFLKAYL 305
>gi|430748512|ref|YP_007211420.1| peptide chain release factor 2 [Thermobacillus composti KWC4]
gi|430732477|gb|AGA56422.1| peptide chain release factor 2 [Thermobacillus composti KWC4]
Length = 369
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +V+P + ++ ++++I EDL+I R+ G GGQ+VNK E+AVRITHIPTG+ V
Sbjct: 213 HTSFVSCDVVPEI-DDDVEIEIRPEDLKIDTYRSSGAGGQHVNKTESAVRITHIPTGIIV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ L++KL + E++ E+ IRG+ WG QIR+YVFHPY
Sbjct: 272 ACQSERSQIQNRERAMKMLRSKLYELKIEEQRKELAAIRGEQTDIAWGNQIRSYVFHPYS 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT +ET ++ +VMDGE++ FI +YL+
Sbjct: 332 MVKDHRTQYETGNVQAVMDGEIDGFIDAYLR 362
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++++D+ + R++ +R S L ++ +A+ E K FWD+ AQ+ + L VK
Sbjct: 5 SVKQDLREMAKRLQALRGSLDLDLKQEIIADYEEKMTAPDFWDDNDRAQKLIAELNAVKS 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
+ T + D A L + D L E A + +L + + FEL LL+ PY
Sbjct: 65 VVE--TYNRLTGDHADLETLLELAEEEGDESLEAELAEGVAKLVRDIGDFELQLLLNQPY 122
Query: 126 DKEGAVISITAGAGGTDAQ 144
D+ A++ + GAGGT++Q
Sbjct: 123 DRLNAILELHPGAGGTESQ 141
>gi|365877955|ref|ZP_09417445.1| peptide chain release factor 2 [Elizabethkingia anophelis Ag1]
gi|442587195|ref|ZP_21006014.1| peptide chain release factor 2 [Elizabethkingia anophelis R26]
gi|365754338|gb|EHM96287.1| peptide chain release factor 2 [Elizabethkingia anophelis Ag1]
gi|442563068|gb|ELR80284.1| peptide chain release factor 2 [Elizabethkingia anophelis R26]
Length = 369
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/163 (46%), Positives = 106/163 (65%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF V PL+ ++++++ I D+ RA G GGQNVNKVET
Sbjct: 195 LVRISPFDSNAKRHTSFVSVYVYPLV-DDTIEININPADITFETMRASGAGGQNVNKVET 253
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVR+ H PTG+ + +E RSQL NK KA+ L+++L I E+R +I + +K EW
Sbjct: 254 AVRLRHAPTGIIIENSESRSQLQNKEKAMQLLRSRLYEIELEERMKARNEIEANKMKIEW 313
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYV HPYKLVKDVR+ +ETSD+ VM+G + PF+K++L
Sbjct: 314 GSQIRNYVMHPYKLVKDVRSAYETSDVDGVMNGNITPFLKAFL 356
>gi|429753727|ref|ZP_19286506.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
taxon 326 str. F0382]
gi|429171932|gb|EKY13520.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
taxon 326 str. F0382]
Length = 316
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 106/150 (70%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL +++++++I D+ R+ G GGQNVNKVETAVR+ H PTG+ +
Sbjct: 156 HTSFASVYVYPL-ADDTIEIEINPADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIII 214
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+E RSQL NK KAL LK++L I ++R ++ +I +K EWG QIRNYV HPYK
Sbjct: 215 ENSETRSQLDNKNKALQLLKSQLYEIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYK 274
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRT +E++D+ SVM+GEL+ F+K+YL
Sbjct: 275 LVKDVRTNYESTDVDSVMNGELDEFLKAYL 304
>gi|377556378|ref|ZP_09786085.1| Peptide chain release factor 2 [Lactobacillus gastricus PS3]
gi|376168428|gb|EHS87197.1| Peptide chain release factor 2 [Lactobacillus gastricus PS3]
Length = 332
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 109/155 (70%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP + ++S+++ I DL + R+ G GGQ++NK ++A+RITH+PTG+
Sbjct: 174 HTSFASIDVMPEM-DDSIEIDINSADLRVDTFRSSGAGGQHINKTDSAIRITHLPTGIVT 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQL N+ A+ LK+KL + +E++A+E +I G+ ++ WG QIR+YV HPY
Sbjct: 233 SSQAERSQLQNRETAMRMLKSKLYELEQEKQAAERAKIAGEQLENGWGSQIRSYVLHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKD RTG+ET D V+DG+L+PFI ++LK++ S
Sbjct: 293 LVKDTRTGYETHDTQGVLDGDLDPFINAFLKWQLS 327
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ +AQ+ + +K + + +T ++D + + L DA L +E + +
Sbjct: 6 FWDDNQQAQKLIDETNQLKGRRDTFLSLQTAVNDLIDLRDLLSL--EADADLEKELENNL 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +++++L QLL GPYD A++ I GAGGT+AQ
Sbjct: 64 RRTTSEVEKYQLNQLLDGPYDANNAILEIHPGAGGTEAQ 102
>gi|126664153|ref|ZP_01735146.1| peptide chain release factor RF-2 [Flavobacteria bacterium BAL38]
gi|126623867|gb|EAZ94562.1| peptide chain release factor RF-2 [Flavobacteria bacterium BAL38]
Length = 285
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 108/150 (72%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL+ ++++++ I D+EI SR+ G GGQNVNKVET V++ H PTG+ +
Sbjct: 129 HTSFASVYVYPLV-DDTIEIDINPADIEIITSRSSGAGGQNVNKVETKVQLFHKPTGIQI 187
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C+E RSQ N+ +A+ LK++L I +++ ++ I +K EWG QIRNYV HPYK
Sbjct: 188 QCSETRSQQDNRQRAMQMLKSQLYEIELKKQQAQRSDIEAGKMKIEWGSQIRNYVMHPYK 247
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVR+GHE+SD+ +M+GE++ F+K+YL
Sbjct: 248 LVKDVRSGHESSDVEGIMNGEIDNFLKAYL 277
>gi|242372989|ref|ZP_04818563.1| peptide chain release factor 2 [Staphylococcus epidermidis
M23864:W1]
gi|242349315|gb|EES40916.1| peptide chain release factor 2 [Staphylococcus epidermidis
M23864:W1]
Length = 386
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 161/338 (47%), Gaps = 70/338 (20%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVT---- 82
L+ E + E E AD FWD++ +AQ+ + +K +N D +++D
Sbjct: 41 LENKETNIQEYEEMMADPGFWDDQNKAQDIIDKNNALKSIVNGYHDLANEVEDMSATREL 100
Query: 83 ----------------IVKLTEEMDSTDAGLL----EEAASIIKELNKALDQFE---LTQ 119
+++ E+MD + LL +A + I EL+ E
Sbjct: 101 LQEEYDEDMKAELEEEVIQFKEKMDQYELQLLLDGPHDANNAILELHPGAGGTESQDWAS 160
Query: 120 LLSGPYDKEG------------------AVISITAGAGGTDA------------------ 143
+L Y + G V S+T G +A
Sbjct: 161 MLLRMYQRYGEQKGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISP 220
Query: 144 -------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITH 196
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH
Sbjct: 221 FDSSGRRHTSFASCDVIPDFDNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITH 280
Query: 197 IPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRN 256
PTG+ V ERSQ+ N+ A+ LK+KL + E++ E+ +IRG+ + WG QIR+
Sbjct: 281 HPTGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRS 340
Query: 257 YVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
YVFHPY +VKD RT ET + +VMDGE+EPFI++YL+
Sbjct: 341 YVFHPYSMVKDHRTNEETGKVDAVMDGEIEPFIEAYLR 378
>gi|227545120|ref|ZP_03975169.1| peptide chain release factor RF2 [Lactobacillus reuteri CF48-3A]
gi|338203931|ref|YP_004650076.1| peptide chain release factor RF2 [Lactobacillus reuteri SD2112]
gi|227184908|gb|EEI64979.1| peptide chain release factor RF2 [Lactobacillus reuteri CF48-3A]
gi|336449171|gb|AEI57786.1| peptide chain release factor RF2 [Lactobacillus reuteri SD2112]
Length = 332
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++S++V I DL + R+ G GGQ++NK E+AVRITHIPTG+
Sbjct: 174 HTSFASVDVMPEL-DDSVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHIPTGIVT 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQL N++ A++ LK+KL + EE++A + +I G+ + WG QIR+YVFHPY
Sbjct: 233 SSQAERSQLQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKD RTG+ET + +VMDG+L+PFI ++L++K S
Sbjct: 293 LVKDNRTGYETHNGQAVMDGDLDPFIDAFLQWKLS 327
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A FW++ +AQ+ + +K+K + + + ++ D T ++L D L ++
Sbjct: 2 AQPDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQISDLETSLELLAV--EPDDDLQKDF 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ KAL+Q+ LTQLL G YD + A++ I GAGGT+AQ
Sbjct: 60 EASFTNTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQ 102
>gi|148270343|ref|YP_001244803.1| peptide chain release factor 2 [Thermotoga petrophila RKU-1]
gi|166225119|sp|A5IM04.1|RF2_THEP1 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|147735887|gb|ABQ47227.1| bacterial peptide chain release factor 2 (bRF-2) [Thermotoga
petrophila RKU-1]
Length = 367
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 111/165 (67%), Gaps = 1/165 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ V+P + ++ +D++I EDL+I RA G GGQ VNK E+
Sbjct: 198 LVRISPFDAARRRHTSFASVNVIPEI-DDDVDIEIRPEDLKIETFRASGHGGQYVNKTES 256
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PTG+ V C ERSQ NK AL LKAKL + E++ EI++I+G+ W
Sbjct: 257 AVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKQREIQEIQGELKDISW 316
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
G QIR+YVFHPY +VKD RTG ET+++ +VMDG+++ FI++ L Y
Sbjct: 317 GNQIRSYVFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAELVY 361
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 76/140 (54%), Gaps = 4/140 (2%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
+ R +E + ++I + ++++E+ E+E K D S WD++ +A+E Q L +K
Sbjct: 4 FETRTRMEELEKKYKDILSVVNENEVDREIEEIEKKLTDPSVWDDQKKAREYTQKLKRLK 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
+ L ++ +D ++L++E D + + I++EL A+ + EL +L+G
Sbjct: 64 NISEDLKRVRSLFEDLEVAIELSDE----DQEMAQHVEEIVQELEGAVKKLELEIILNGK 119
Query: 125 YDKEGAVISITAGAGGTDAQ 144
YD A +S+ GAGGT++Q
Sbjct: 120 YDPNNAYLSVHPGAGGTESQ 139
>gi|420160156|ref|ZP_14666943.1| peptide chain release factor 2 [Capnocytophaga ochracea str. Holt
25]
gi|394760939|gb|EJF43401.1| peptide chain release factor 2 [Capnocytophaga ochracea str. Holt
25]
Length = 315
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 106/150 (70%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL+ ++++++ I D+ R+ G GGQNVNKVETAVR+ H PTG+ +
Sbjct: 156 HTSFASVYVYPLV-DDTIEIDINPADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIII 214
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+E RSQL NK KAL LK++L I ++R ++ +I +K EWG QIRNYV HPYK
Sbjct: 215 ENSETRSQLDNKNKALQLLKSQLYEIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYK 274
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRT +E++D+ SVM+GEL+ F+K+YL
Sbjct: 275 LVKDVRTNYESTDVDSVMNGELDEFLKAYL 304
>gi|363894512|ref|ZP_09321593.1| peptide chain release factor 2 [Eubacteriaceae bacterium ACC19a]
gi|361962263|gb|EHL15409.1| peptide chain release factor 2 [Eubacteriaceae bacterium ACC19a]
Length = 344
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 103/150 (68%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P L ++S+ + I +DL+I R+ G GGQ+VNK E+A+RITHIPTGV V
Sbjct: 191 HTSFASVDVLPEL-DDSIKIDINPKDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGVVV 249
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ +NK A+ L AKL+ + E + +I+ I+G WG QIR+YVF PY
Sbjct: 250 QCQNERSQFSNKDTAMKMLMAKLIELKELEHKDKIEDIQGKYSLIAWGSQIRSYVFQPYT 309
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD RT E +I+SVMDG++ PFI +YL
Sbjct: 310 MVKDHRTNFEIGNIISVMDGDIMPFINAYL 339
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
+ E+ + E+ + D FW++R AQ+ L+ ++ K+ +K++D + +L E
Sbjct: 12 QDEILKEEINSQD--FWNDRENAQKILKKSKQIQTKLESYNTASSKLEDLEVLFELATE- 68
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D L EE I ++ + Q L LLSG YD A++S+ +G GG DAQ
Sbjct: 69 ---DENLEEELIKEIDDVQADIKQLSLQVLLSGEYDANNAILSVHSGTGGLDAQ 119
>gi|256820726|ref|YP_003142005.1| peptide chain release factor 2 [Capnocytophaga ochracea DSM 7271]
gi|256582309|gb|ACU93444.1| bacterial peptide chain release factor 2 (bRF- 2) [Capnocytophaga
ochracea DSM 7271]
Length = 367
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 110/163 (67%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ V PL+ ++++++ I D+ R+ G GGQNVNKVET
Sbjct: 195 LVRISPFDSNAKRHTSFASVYVYPLV-DDTIEIDINPADITFETMRSSGAGGQNVNKVET 253
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVR+ H PTG+ + +E RSQL NK KAL LK++L I ++R ++ +I +K EW
Sbjct: 254 AVRLRHHPTGIIIENSETRSQLDNKNKALQLLKSQLYEIELKKRQAKRDEIEAGKMKIEW 313
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYV HPYKLVKDVRT +E++D+ SVM+GEL+ F+K+YL
Sbjct: 314 GSQIRNYVMHPYKLVKDVRTNYESTDVDSVMNGELDEFLKAYL 356
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 33 ELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDS 92
E++ E K FWDN EA++ ++ L K + + + D ++ +E ++
Sbjct: 29 EISNEEEKTFAPDFWDNAKEAEKVMRELRTKKKWVEDYEEAENLTSDIEVLLDFFKEGEA 88
Query: 93 TDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
T + + + A++ E +LS D AV+ ITAGAGGT++
Sbjct: 89 TAEDVDHQYTQALH----AIEALEFRNMLSDEGDTMSAVLQITAGAGGTES 135
>gi|406904961|gb|EKD46571.1| hypothetical protein ACD_67C00169G0003 [uncultured bacterium]
Length = 268
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/153 (51%), Positives = 107/153 (69%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P++ EE +V I DL I RA G GGQ+VN ++AVRITH PTGV V
Sbjct: 109 QTSFAIVEVLPVI-EEISEVVISTSDLVIDTYRASGAGGQHVNTTDSAVRITHTPTGVVV 167
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQL NK +A+ LKA++ E++ E ++RG+ AEWG QIR+YV HPYK
Sbjct: 168 TCQSERSQLQNKEQAMKVLKARIHQKYLEKQKEEKAKLRGEYKSAEWGSQIRSYVIHPYK 227
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT HETSD V++G+L+ F++SYL+++
Sbjct: 228 MVKDHRTKHETSDAEKVLEGDLQGFMESYLRWQ 260
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 108 LNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ K + E LL G YDK +++I +GAGG DAQ
Sbjct: 1 MQKEFEALEFKSLLGGEYDKSDVILAIRSGAGGVDAQ 37
>gi|393780195|ref|ZP_10368415.1| peptide chain release factor 2 [Capnocytophaga sp. oral taxon 412
str. F0487]
gi|429756013|ref|ZP_19288627.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
taxon 324 str. F0483]
gi|392608837|gb|EIW91671.1| peptide chain release factor 2 [Capnocytophaga sp. oral taxon 412
str. F0487]
gi|429172115|gb|EKY13694.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
taxon 324 str. F0483]
Length = 315
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 106/150 (70%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL+ ++++++ I D+ R+ G GGQNVNKVETAVR+ H PTG+ +
Sbjct: 156 HTSFASVYVYPLV-DDTIEIDINPADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIII 214
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+E RSQL NK KAL LK++L I ++R ++ +I +K EWG QIRNYV HPYK
Sbjct: 215 ENSETRSQLDNKNKALQLLKSQLYEIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYK 274
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRT +E++D+ SVM+GEL+ F+K+YL
Sbjct: 275 LVKDVRTNYESTDVDSVMNGELDEFLKAYL 304
>gi|373471242|ref|ZP_09562304.1| peptide chain release factor 2 [Lachnospiraceae bacterium oral
taxon 082 str. F0431]
gi|371760786|gb|EHO49457.1| peptide chain release factor 2 [Lachnospiraceae bacterium oral
taxon 082 str. F0431]
Length = 337
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF ++MP + EE +DV I +DL I R+ G GGQ++NK +A+RITHIPTGV V
Sbjct: 174 QTSFVSCDIMPDI-EEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK KA+ LKAKL ++ ++ ++ IRGD WG QIR+YV PY
Sbjct: 233 QCQNERSQFQNKDKAMQMLKAKLFLLKQQANVEKLSDIRGDVKDIGWGNQIRSYVMQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD TG E+ ++ +V+DG+++ FI +YL ++
Sbjct: 293 MVKDHGTGAESGNVSAVLDGDIDKFIIAYLTWQ 325
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 45 SFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASI 104
+FWD+ E+ + ++ +KD + K++ +D ++++ E D L+ E +
Sbjct: 5 TFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEMGYE--ENDESLIPEIEGM 62
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
++ K +D+ ++ LL+G YD A++ + AGAGGT++
Sbjct: 63 LEAFTKEIDELKIATLLTGEYDSSNAIMKLNAGAGGTES 101
>gi|420149933|ref|ZP_14657100.1| peptide chain release factor 2 [Capnocytophaga sp. oral taxon 335
str. F0486]
gi|394752926|gb|EJF36543.1| peptide chain release factor 2 [Capnocytophaga sp. oral taxon 335
str. F0486]
Length = 315
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 106/150 (70%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL+ ++++++ I D+ R+ G GGQNVNKVETAVR+ H PTG+ +
Sbjct: 156 HTSFASVYVYPLV-DDTIEIDINPADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIII 214
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+E RSQL NK KAL LK++L I ++R ++ +I +K EWG QIRNYV HPYK
Sbjct: 215 ENSETRSQLDNKNKALQLLKSQLYEIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYK 274
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRT +E++D+ SVM+GEL+ F+K+YL
Sbjct: 275 LVKDVRTNYESTDVDSVMNGELDEFLKAYL 304
>gi|423336076|ref|ZP_17313827.1| peptide chain release factor 2 [Lactobacillus reuteri ATCC 53608]
gi|337729279|emb|CCC04406.1| peptide chain release factor 2 [Lactobacillus reuteri ATCC 53608]
Length = 332
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++S++V I DL + R+ G GGQ++NK E+AVRITHIPTG+
Sbjct: 174 HTSFASVDVMPEL-DDSVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHIPTGIVT 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQL N++ A++ LK+KL + EE++A + +I G+ + WG QIR+YVFHPY
Sbjct: 233 SSQAERSQLQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKD RTG+ET + +VMDG+L+PFI ++L++K S
Sbjct: 293 LVKDNRTGYETHNGQAVMDGDLDPFIDAFLQWKLS 327
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A FW++ +AQ+ + +K+K + + + ++ D T ++L D L ++
Sbjct: 2 AQPDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQISDLETSLELLAV--EPDDDLQKDF 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ KAL+Q+ LTQLL G YD + A++ I GAGGT+AQ
Sbjct: 60 EASFTNTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQ 102
>gi|72162878|ref|YP_290535.1| peptide chain release factor 2 [Thermobifida fusca YX]
gi|71916610|gb|AAZ56512.1| bacterial peptide chain release factor 2 (bRF-2) [Thermobifida
fusca YX]
Length = 375
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 180/348 (51%), Gaps = 72/348 (20%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+E I A L E+ +L ++AD W+++A AQ+ + L+ ++ +++ + + ++++
Sbjct: 17 LENIEAVLDLDAKRTEIEQLREQSADPELWNDQANAQKVTRRLSFLESEVSKVENIRSRI 76
Query: 78 D-------------DAVTIVKLTEEM-----DSTD-------AGLLEEAASIIKELNKA- 111
D DA T+ + E+ D +D +G +E ++I +A
Sbjct: 77 DDLGVLFELAAAENDAETLAEARRELAALRKDISDLEVRTLLSGPYDEREALISINAQAG 136
Query: 112 -LDQFELTQLLS------------------GPYDKEGAVISIT------------AGAGG 140
+D + TQ+L Y +E + S T G G
Sbjct: 137 GVDAADWTQMLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFVVKAPYAYGMLRGEHG 196
Query: 141 TDA-------------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNK 187
T QTSF+G +V+P++ E+S ++I E +L I R+ G GGQ VN
Sbjct: 197 THRLVRISPFDNQSRRQTSFAGVDVVPVV-EQSDHIEIDESELRIDVYRSSGPGGQGVNT 255
Query: 188 VETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVK 247
++AVRITH+PTG+ V C ERSQL N+ A+S L+AKLL ++ +E+ +RG++ +
Sbjct: 256 TDSAVRITHLPTGIVVSCQNERSQLQNRATAMSILQAKLLERKRQEEEAELAALRGESAR 315
Query: 248 AEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
A WG Q+RNYV HPY+ VKD+RTG ET + +V+DGE++ FI + +++
Sbjct: 316 A-WGTQMRNYVLHPYQSVKDIRTGVETGNTSAVLDGEIDEFINAGIRW 362
>gi|429747201|ref|ZP_19280486.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
taxon 380 str. F0488]
gi|429163718|gb|EKY05917.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
taxon 380 str. F0488]
Length = 315
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 106/150 (70%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL+ ++++++ I D+ R+ G GGQNVNKVETAVR+ H PTG+ +
Sbjct: 156 HTSFASVYVYPLV-DDTIEIDINPADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIII 214
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+E RSQL NK KAL LK++L I ++R ++ +I +K EWG QIRNYV HPYK
Sbjct: 215 ENSETRSQLDNKNKALQLLKSQLYEIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYK 274
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRT +E++D+ SVM+GEL+ F+K+YL
Sbjct: 275 LVKDVRTNYESTDVDSVMNGELDEFLKAYL 304
>gi|403667837|ref|ZP_10933137.1| peptide chain release factor 2 [Kurthia sp. JC8E]
Length = 327
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 103/153 (67%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP +E + V I EDL+I RA G GGQ++NK E+AVRITH+PT V
Sbjct: 174 HTSFVSCDVMPEFSDEVV-VDIRTEDLKIDTYRASGAGGQHINKTESAVRITHLPTNTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ KA+S L+AKL + E++ + +IRG+ + W QIR+YVFHPY
Sbjct: 233 SCQAERSQIKNRAKAMSMLQAKLYQLKLEEKQEHLDEIRGEQKEIGWSSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT ET ++ +VMDG+L+ FI +YL+ K
Sbjct: 293 MVKDHRTNVETGNVQAVMDGDLDDFINAYLRMK 325
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA-VTIVKLTEEMDSTDAGLLEEA 101
D SFW+++ +AQ + +KD +N T+ +D +T L EEMD LL +
Sbjct: 3 DPSFWNDQQKAQTLINESKALKDTVNEFYSLATEQEDLEMTHDLLKEEMDE---ALLVDL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+K +D FEL LLS PYD+ A++ + GAGGT++Q
Sbjct: 60 DESMKAYQARIDTFELQLLLSEPYDQNNAILELHPGAGGTESQ 102
>gi|315223860|ref|ZP_07865708.1| peptide chain release factor RF2 [Capnocytophaga ochracea F0287]
gi|314946190|gb|EFS98191.1| peptide chain release factor RF2 [Capnocytophaga ochracea F0287]
Length = 315
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 106/150 (70%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL+ ++++++ I D+ R+ G GGQNVNKVETAVR+ H PTG+ +
Sbjct: 156 HTSFASVYVYPLV-DDTIEIDINPADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIII 214
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+E RSQL NK KAL LK++L I ++R ++ +I +K EWG QIRNYV HPYK
Sbjct: 215 ENSETRSQLDNKNKALQLLKSQLYEIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYK 274
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRT +E++D+ SVM+GEL+ F+K+YL
Sbjct: 275 LVKDVRTNYESTDVDSVMNGELDEFLKAYL 304
>gi|148543602|ref|YP_001270972.1| peptide chain release factor 2 [Lactobacillus reuteri DSM 20016]
gi|184153010|ref|YP_001841351.1| peptide chain release factor 2 [Lactobacillus reuteri JCM 1112]
gi|227363435|ref|ZP_03847559.1| peptide chain release factor RF2 [Lactobacillus reuteri MM2-3]
gi|325681956|ref|ZP_08161474.1| peptide chain release factor RF2 [Lactobacillus reuteri MM4-1A]
gi|148530636|gb|ABQ82635.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
reuteri DSM 20016]
gi|183224354|dbj|BAG24871.1| peptide chain release factor 2 [Lactobacillus reuteri JCM 1112]
gi|227071535|gb|EEI09834.1| peptide chain release factor RF2 [Lactobacillus reuteri MM2-3]
gi|324978600|gb|EGC15549.1| peptide chain release factor RF2 [Lactobacillus reuteri MM4-1A]
Length = 332
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++S++V I DL + R+ G GGQ++NK E+AVRITHIPTG+
Sbjct: 174 HTSFASVDVMPEL-DDSVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHIPTGIVT 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQL N++ A++ LK+KL + EE++A + +I G+ + WG QIR+YVFHPY
Sbjct: 233 SSQAERSQLQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKD RTG+ET + +VMDG+L+PFI ++L++K S
Sbjct: 293 LVKDNRTGYETHNGQAVMDGDLDPFIDAFLQWKLS 327
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A FW++ +AQ+ + +K+K + + + ++ D T ++L D L +E
Sbjct: 2 AQPDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQIGDLETSLELLAV--EPDDDLQKEF 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ KAL+Q+ LTQLL G YD + A++ I GAGGT+AQ
Sbjct: 60 EASFTNTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQ 102
>gi|300853467|ref|YP_003778451.1| peptide chain release factor B [Clostridium ljungdahlii DSM 13528]
gi|300433582|gb|ADK13349.1| peptide chain release factor B [Clostridium ljungdahlii DSM 13528]
Length = 329
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 107/164 (65%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ QTSF+ EV+P L ++ D+ I EDL + R+ G GGQ+VNK E+
Sbjct: 163 LVRISPFNANGKRQTSFASVEVLPELTKDQ-DIDIRPEDLRVDTYRSSGAGGQHVNKTES 221
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITHIPTG+ V+C ERSQ N+ A+ LK+KL+ + E +I+ + G+ W
Sbjct: 222 AVRITHIPTGIVVQCQNERSQHYNRETAMLMLKSKLVELKERAHKEKIEDLAGELKDMGW 281
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIR+YVFHPY LVKD RTG E ++ SVMDGE++ FI +YL+
Sbjct: 282 GSQIRSYVFHPYTLVKDHRTGVENGNVSSVMDGEIDNFILAYLR 325
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
MK + +FWD+ AQE + +K+++ +++++DA + + EE D
Sbjct: 1 MKMQEPNFWDHLERAQEVTSEEKFLNEKLDMYNKLESRINDAEILAHIAEE--EEDVSDC 58
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
++ S ++++ +D+ ++ LLSG YDK A++++ G GGTDAQ
Sbjct: 59 KDILSEVEDIENIIDKLKIEILLSGEYDKNNAILNLHVGVGGTDAQ 104
>gi|170289031|ref|YP_001739269.1| peptide chain release factor 2 [Thermotoga sp. RQ2]
gi|281412649|ref|YP_003346728.1| peptide chain release factor 2 [Thermotoga naphthophila RKU-10]
gi|418045638|ref|ZP_12683733.1| peptide chain release factor 2 [Thermotoga maritima MSB8]
gi|238688848|sp|B1LB88.1|RF2_THESQ RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|170176534|gb|ACB09586.1| peptide chain release factor 2 [Thermotoga sp. RQ2]
gi|281373752|gb|ADA67314.1| peptide chain release factor 2 [Thermotoga naphthophila RKU-10]
gi|351676523|gb|EHA59676.1| peptide chain release factor 2 [Thermotoga maritima MSB8]
Length = 367
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 111/165 (67%), Gaps = 1/165 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ V+P + ++ +D++I EDL+I RA G GGQ VNK E+
Sbjct: 198 LVRISPFDAARRRHTSFASVNVIPEI-DDDVDIEIRPEDLKIETFRASGHGGQYVNKTES 256
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PTG+ V C ERSQ NK AL LKAKL + E++ EI++I+G+ W
Sbjct: 257 AVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKRREIQEIQGELKDISW 316
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
G QIR+Y+FHPY +VKD RTG ET+++ +VMDG+++ FI++ L Y
Sbjct: 317 GNQIRSYIFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAELVY 361
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
+ + +E + +++ + ++ KEL E+E K D S WD++ +A+E Q L +K
Sbjct: 4 FETKTKIEELEKKYKDVLSVVNEDEINKELEEVEKKLTDPSVWDDQKKAREYTQKLKRLK 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
+ L ++ +D ++L++E D + + I++EL A+ + EL +L+G
Sbjct: 64 NISEDLKRVRSLFEDLEVAIELSDE----DQEMAQHVEEIVQELEGAVKKLELEIILNGK 119
Query: 125 YDKEGAVISITAGAGGTDAQ 144
YD A +S+ GAGGT++Q
Sbjct: 120 YDPNNAYLSVHPGAGGTESQ 139
>gi|293375591|ref|ZP_06621865.1| peptide chain release factor 2 [Turicibacter sanguinis PC909]
gi|325836763|ref|ZP_08166230.1| peptide chain release factor 2 [Turicibacter sp. HGF1]
gi|292645808|gb|EFF63844.1| peptide chain release factor 2 [Turicibacter sanguinis PC909]
gi|325491141|gb|EGC93430.1| peptide chain release factor 2 [Turicibacter sp. HGF1]
Length = 365
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ G TSF +VMP + +D++I EDL+I RA G GGQ++N ++
Sbjct: 200 LVRISPFDSGGRRHTSFCSCDVMPEFSGD-IDIEIRAEDLKIDTYRASGAGGQHINTTDS 258
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITHIPT V C +RSQ+ N+ A+ LK+KL E++ +E+ +IRG+ + W
Sbjct: 259 AVRITHIPTNTIVTCQNQRSQIKNREAAMEMLKSKLYQRKLEEQEAELAKIRGEVKEIGW 318
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
G QIR+YVFHPY LVKD RT +E ++ SVMDG+L+ FI +YL+Y
Sbjct: 319 GSQIRSYVFHPYSLVKDHRTSYEVGNVQSVMDGDLDGFIDAYLRY 363
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 86/142 (60%), Gaps = 2/142 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
+ + +R +++ S+R+ + + S ++Q E E+ E + + + FWD++ +AQE + A
Sbjct: 2 EIHEIRSEIKKMSERINQFKDSLNVEQKEAEIKEYDDQMQVAGFWDDQRKAQEVINAANA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+KDK+N + ++++ +L ++ DA L E S I+E+++ L++FEL LLS
Sbjct: 62 IKDKVNTFYSLEGEVEELAVAFELI--LEEPDADLQAELESQIEEVSEHLNKFELEILLS 119
Query: 123 GPYDKEGAVISITAGAGGTDAQ 144
GPYD A++ + GAGGT++Q
Sbjct: 120 GPYDANNAILELHPGAGGTESQ 141
>gi|139474158|ref|YP_001128874.1| peptide chain release factor 2 [Streptococcus pyogenes str.
Manfredo]
gi|166225116|sp|A2RFN2.1|RF2_STRPG RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|134272405|emb|CAM30661.1| peptide chain release factor 2 [Streptococcus pyogenes str.
Manfredo]
Length = 365
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 108/153 (70%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L + +++V++ ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 211 HTSFASVEVMPEL-DNTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 269
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 270 SSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 329
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT E + + VMDGE+ FI +YLK++
Sbjct: 330 MVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 362
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+ + +++ R S L +LE+E+A LE + FW++ AQ+T Q L ++K K
Sbjct: 6 IRQKIVENKEKLTSFRRSLDLDRLEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGK 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + + D+ ++++ +E DS L EE + +L+K + +E+T LLS PYD
Sbjct: 66 YDTFHNMQELSDETELLLEMLDEDDS----LKEELEENLMQLDKIMGAYEMTLLLSEPYD 121
Query: 127 KEGAVISITAGAGGTDAQ 144
A++ I G+GGT+AQ
Sbjct: 122 HNNAILEIHPGSGGTEAQ 139
>gi|366164665|ref|ZP_09464420.1| peptide chain release factor 2 [Acetivibrio cellulolyticus CD2]
Length = 340
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 106/157 (67%), Gaps = 1/157 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++ ++V I +DL I RA G GGQ++NK E+A+RITHIPTGV V
Sbjct: 185 HTSFASCDVMPELSDD-VEVNINPDDLRIDTYRASGAGGQHINKTESAIRITHIPTGVVV 243
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ NK A+ LK+KLL I E ++ +I+ ++G + WG QIR+YVF PY
Sbjct: 244 ACQTERSQFQNKDTAMRMLKSKLLEIKEREQKEKIEDLKGIQMDIAWGSQIRSYVFCPYT 303
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 300
LVKD RT +E ++ +VMDG+L+ FI SYL + S S
Sbjct: 304 LVKDHRTNYEQINVDNVMDGDLDGFINSYLVFSNSES 340
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+ ++ ELE KA++ FW++ +Q+ LQ + +K+K+ + +DA T+ +L E
Sbjct: 1 MSNDIEELEQKASEPDFWNDIENSQKVLQKIKTMKEKLERYNRLTQEWEDAKTLCELGLE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D D + E K+ K ++ L LL GPYDK A++++ AGAGGT+AQ
Sbjct: 61 ED--DESVFTEVEDSFKKFKKDFEELRLETLLIGPYDKNNAILTLHAGAGGTEAQ 113
>gi|15644327|ref|NP_229379.1| peptide chain release factor 2 [Thermotoga maritima MSB8]
gi|7388057|sp|Q9X1R5.1|RF2_THEMA RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|4982148|gb|AAD36646.1|AE001802_15 peptide chain release factor RF-2 [Thermotoga maritima MSB8]
Length = 369
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 111/165 (67%), Gaps = 1/165 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ V+P + ++ +D++I EDL+I RA G GGQ VNK E+
Sbjct: 200 LVRISPFDAARRRHTSFASVNVIPEI-DDDVDIEIRPEDLKIETFRASGHGGQYVNKTES 258
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PTG+ V C ERSQ NK AL LKAKL + E++ EI++I+G+ W
Sbjct: 259 AVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKRREIQEIQGELKDISW 318
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
G QIR+Y+FHPY +VKD RTG ET+++ +VMDG+++ FI++ L Y
Sbjct: 319 GNQIRSYIFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAELVY 363
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
+ + +E + +++ + ++ KEL E+E K D S WD++ +A+E Q L +K
Sbjct: 6 FETKTKIEELEKKYKDVLSVVNEDEINKELEEVEKKLTDPSVWDDQKKAREYTQKLKRLK 65
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
+ L ++ +D ++L++E D + + I++EL A+ + EL +L+G
Sbjct: 66 NISEDLKRVRSLFEDLEVAIELSDE----DQEMAQHVEEIVQELEGAVKKLELEIILNGK 121
Query: 125 YDKEGAVISITAGAGGTDAQ 144
YD A +S+ GAGGT++Q
Sbjct: 122 YDPNNAYLSVHPGAGGTESQ 141
>gi|260438124|ref|ZP_05791940.1| peptide chain release factor 2 [Butyrivibrio crossotus DSM 2876]
gi|292809448|gb|EFF68653.1| peptide chain release factor 2 [Butyrivibrio crossotus DSM 2876]
Length = 372
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 171/362 (47%), Gaps = 77/362 (21%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQET---------- 56
R ++ + + ++E+R++ L K++ ELEM D FW++ +Q+
Sbjct: 7 FRYELNSYDEPLKELRSALDLDNKAKKIEELEMHMEDQGFWNDPETSQKKLKELKALKDA 66
Query: 57 ------LQALTD-----------------VKDKINLLTDFKTKMDDAVTIVKLTEEMDST 93
L+ L D + D L+ +FK + L+EE D+
Sbjct: 67 FTNYNELEKLRDDARTFMEIADEENDTSIIPDIEELVNEFKNLFEKVRISTLLSEEYDNC 126
Query: 94 DAGL-----------LEEAASIIKELNKALDQ----FELTQLLSGPYDKEGAVISITAGA 138
+A L + A+ +++ + + E L G E V S+T
Sbjct: 127 NAILKLNAGAGGTESCDWASMLLRMYTRWAESKGYTVETLDYLDG---DEAGVKSVTIQI 183
Query: 139 GGTDA-------------------------QTSFSGAEVMPLLPEESMDVQIPEEDLEIS 173
G +A QTSF +VMP + EE +DV I E+DL I
Sbjct: 184 NGENAYGYLKSERGVHRLVRISPFNANGKRQTSFVSCDVMPDI-EEDLDVDINEDDLRID 242
Query: 174 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 233
R+ G GGQ++NK +A+RITHIPTG+ V+C ERSQ NK KA+ LKAKL ++ +++
Sbjct: 243 TYRSSGAGGQHINKTSSAIRITHIPTGIVVQCQNERSQHQNKDKAMQMLKAKLYLLKQQE 302
Query: 234 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
A + IRG+ + WG QIR+Y+ PY LVKD RT E+ + +V+DG ++ F+ YL
Sbjct: 303 NAEKEAGIRGEVKEIGWGNQIRSYILQPYTLVKDHRTNAESGNAQAVLDGNIDLFLGEYL 362
Query: 294 KY 295
K+
Sbjct: 363 KW 364
>gi|406659286|ref|ZP_11067424.1| peptide chain release factor RF2 [Streptococcus iniae 9117]
gi|405577395|gb|EKB51543.1| peptide chain release factor RF2 [Streptococcus iniae 9117]
Length = 338
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V I ++++++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 183 HTSFTSVEVMPEL-DDTIEVDIRDDEIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 241
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 242 ASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYT 301
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT E S + VMDG+++ FI +YLK++
Sbjct: 302 MVKDHRTNFEVSQVDKVMDGDIDGFIDAYLKWR 334
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+E+A LE + + FW++ AQ+T Q L D+K N +M D +L E
Sbjct: 1 MEEEIALLEHQMTEPDFWNDNIAAQKTSQELNDLKVTYNTFH----QMQDLSEETELYLE 56
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
M D + EE + +++L++ L +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 57 MLDEDESVKEELEASLEKLDQILASYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 111
>gi|110802702|ref|YP_699445.1| peptide chain release factor 2 [Clostridium perfringens SM101]
gi|123145940|sp|Q0SR12.1|RF2_CLOPS RecName: Full=Peptide chain release factor 2; Short=RF-2
Length = 364
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 102/150 (68%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P L + D++I DL I RAGG GGQ+VNK E+AVRITHIPTG+ V
Sbjct: 214 QTSFASVEVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ +N+ A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY
Sbjct: 273 QCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYS 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD RT ETS++ VM G+++ FI +YL
Sbjct: 333 MVKDHRTNVETSNVNGVMGGDIDNFIIAYL 362
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 77/129 (59%), Gaps = 3/129 (2%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
+ ++E+ AS L LEK+ AELE+K ++ FWD+ +AQE Q VKDKI+ +
Sbjct: 17 NNLKEMGASLDLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNE 76
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
++DD + +L EE D A +E S +K L+K +D ++ +LSG YD+ A++++
Sbjct: 77 RIDDVEVLKELMEENDEETA---KEIISEVKALSKEIDTLKIETILSGEYDRNNAILTLH 133
Query: 136 AGAGGTDAQ 144
G GG+DA
Sbjct: 134 TGVGGSDAN 142
>gi|125972886|ref|YP_001036796.1| peptide chain release factor 2 [Clostridium thermocellum ATCC
27405]
gi|125713111|gb|ABN51603.1| peptide chain release factor 2 [Clostridium thermocellum ATCC
27405]
Length = 357
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 153/278 (55%), Gaps = 21/278 (7%)
Query: 23 ASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLLTDFKTKMDD 79
A G + +KE L ++ + +D + A TL A T+ +D + +L T+ +
Sbjct: 81 AVEGFKAFKKEFEALRLETLLTGQYD-KNNALLTLHAGAGGTEAQDWVQMLFRMYTRWAE 139
Query: 80 AVTI-VKLTEEMDSTDAGLLEEAASIIKELNKALDQFE--LTQLLS-GPYDKEGAVISIT 135
VK+ + +D +AG+ +I E + E + +L+ P+D G
Sbjct: 140 KKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKSEKGVHRLVRISPFDASGR----- 194
Query: 136 AGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRIT 195
TSF+ +VMP L ++ ++V I +DL I R+ G GGQ++NK E+AVRIT
Sbjct: 195 -------RHTSFASLDVMPELNDD-IEVHINPDDLRIDTYRSSGAGGQHINKTESAVRIT 246
Query: 196 HIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIR 255
HIPTG+ V C ERSQ NK A+ LKAKL+ + E + +I+ ++G ++ WG QIR
Sbjct: 247 HIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDLKGIQLEIAWGSQIR 306
Query: 256 NYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+YVF PY LVKD RT +E ++ +VMDGEL+ FI SYL
Sbjct: 307 SYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYL 344
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 33 ELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDS 92
++ ELE KA++ FW++ +Q+ LQ + ++ K+ ++ +D +T+ +L ++
Sbjct: 15 QIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKLVSQWEDLITLCELG--IEE 72
Query: 93 TDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D ++ EA K K + L LL+G YDK A++++ AGAGGT+AQ
Sbjct: 73 QDESVIPEAVEGFKAFKKEFEALRLETLLTGQYDKNNALLTLHAGAGGTEAQ 124
>gi|442805591|ref|YP_007373740.1| peptide chain release factor 2 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741441|gb|AGC69130.1| peptide chain release factor 2 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 339
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 106/152 (69%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P++ +S ++ I ED+++ RA G GGQ+VNK +AVR+THIPTG+ V
Sbjct: 185 HTSFASMEVLPVM-NDSDEIHIDPEDIKMDVFRASGAGGQHVNKTSSAVRLTHIPTGIVV 243
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ N+ A+ L AKLL + E ++ +I +++G+ + WG QIR+Y+F PY
Sbjct: 244 TCQNERSQHQNRETAMKMLYAKLLELKEREKQQKINELKGEQMDIAWGSQIRSYIFCPYT 303
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
LVKD RTG+E +++ VMDGE++ FI +YLK+
Sbjct: 304 LVKDHRTGYEEANVQKVMDGEIDEFISAYLKW 335
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 70/114 (61%), Gaps = 2/114 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+EKELAEL+ KA + FWD+ +Q+ LQ +++DK++ KT +D +T+V+L
Sbjct: 1 MEKELAELDQKAQEPGFWDDIENSQKILQRSKNLRDKLDGFNKLKTDCEDLLTLVELA-- 58
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
++ D + +E S KE+ ++ +L LL G YDK A+ ++ AGAGGT+A
Sbjct: 59 LEEKDESVFDEVESNFKEIKSRFEKLKLQTLLKGEYDKNDAIFTLHAGAGGTEA 112
>gi|292669366|ref|ZP_06602792.1| peptide chain release factor RF2 [Selenomonas noxia ATCC 43541]
gi|292649001|gb|EFF66973.1| peptide chain release factor RF2 [Selenomonas noxia ATCC 43541]
Length = 368
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS +VMP + +++++V I +D+ + + RA G GGQ++NK +AVR+TH PTG+ V
Sbjct: 212 HTSFSACDVMPEI-DDAVEVPINMDDVRVDYFRASGAGGQHINKTSSAVRMTHEPTGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL NK + L L+AKL + +E++ EI ++ G K EWG QIR+YVF PY
Sbjct: 271 QCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEEIARLEGVQQKIEWGSQIRSYVFQPYT 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKDVRT ET ++ +VMDG+++PFI++YL K
Sbjct: 331 MVKDVRTNAETGNVQAVMDGDIDPFIRAYLNAK 363
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 79/130 (60%), Gaps = 2/130 (1%)
Query: 15 SDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFK 74
++++++R S + E+++AELE K + SFWD+ A AQ+ Q L D+K ++ D
Sbjct: 13 GEKLDQMRISLEIPAKEEKIAELEYKMGEPSFWDDAAAAQKLNQELADLKGGVDTYRDLV 72
Query: 75 TKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISI 134
K +DA T+ ++ ++ DA + + + + +++ L+ +L LLSG YD A++++
Sbjct: 73 AKYEDAETLYEMG--IEENDASMEADIRAELTLISEGLETLQLEVLLSGEYDANDAILTL 130
Query: 135 TAGAGGTDAQ 144
AGAGGT+AQ
Sbjct: 131 HAGAGGTEAQ 140
>gi|255926563|gb|ABG86573.2| peptide chain release factor 2 [Clostridium perfringens SM101]
Length = 364
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 102/150 (68%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P L + D++I DL I RAGG GGQ+VNK E+AVRITHIPTG+ V
Sbjct: 214 QTSFASVEVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ +N+ A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY
Sbjct: 273 QCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYS 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD RT ETS++ VM G+++ FI +YL
Sbjct: 333 MVKDHRTNVETSNVNGVMGGDIDNFIIAYL 362
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 77/129 (59%), Gaps = 3/129 (2%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
+ ++E+ AS L LEK+ AELE+K ++ FWD+ +AQE Q VKDKI+ +
Sbjct: 17 NNLKEMGASLCLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNE 76
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
++DD + +L EE D A +E S +K L+K +D ++ +LSG YD+ A++++
Sbjct: 77 RIDDVEVLKELMEENDEETA---KEIISEVKALSKEIDTLKIETILSGEYDRNNAILTLH 133
Query: 136 AGAGGTDAQ 144
G GG+DA
Sbjct: 134 TGVGGSDAN 142
>gi|332686413|ref|YP_004456187.1| peptide chain release factor 2 [Melissococcus plutonius ATCC 35311]
gi|332370422|dbj|BAK21378.1| peptide chain release factor 2 [Melissococcus plutonius ATCC 35311]
Length = 328
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 108/153 (70%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF ++MP L +E++++ I +DL++ RA G GGQ++NK E+AVRITHIPT V
Sbjct: 174 HTSFCSVDIMPEL-DETIEIDINPDDLKVDTYRASGAGGQHINKTESAVRITHIPTSTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+ LK+KL + E++A E ++RG+ ++ WG QIR+YVFHPY
Sbjct: 233 SSQAQRSQLKNREQAMKTLKSKLYQLEMEKKAQESAELRGEQLEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT ET ++ +VMDGE++ FI +YLK++
Sbjct: 293 MVKDHRTNMETGNVQAVMDGEIDNFIDAYLKWQ 325
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD +FW+N +AQ+ + K+K ++++ + +L +++D D + E
Sbjct: 2 ADVNFWNNAKQAQQIINETNREKEKYQQFNQLADELEELEIMYEL-QQVD-FDEAIQTEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQTSFSGAEVMPLLPEESM 161
IK+L K L +EL LL+GPYDK A++ GAGGT++Q S M + ES
Sbjct: 60 IQRIKQLEKQLKTYELALLLNGPYDKNNAIVEFHPGAGGTESQDWGSMLLRMYMRWAESR 119
Query: 162 DVQIPEEDLEISFSRAGGKGG 182
+ QI E+ +AG + G
Sbjct: 120 NFQI-----EVLDYQAGDEAG 135
>gi|295105719|emb|CBL03262.1| peptide chain release factor 2 [Gordonibacter pamelaeae 7-10-1-b]
Length = 363
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 108/155 (69%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
T+F+G EV+P+LP++ ++V + D+ + R+ G GGQ VN ++AVR+THIPT + V
Sbjct: 209 HTTFAGVEVLPVLPDD-IEVDLNPADVRVDVYRSSGPGGQCVNTTDSAVRLTHIPTNIVV 267
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C E+SQL NK A LKAKL E++RA E+ ++RGD + +G QIRNYV +PY+
Sbjct: 268 TCQNEKSQLQNKEAAFRVLKAKLYEREEQKRAQELAELRGDRMDNTFGSQIRNYVLYPYQ 327
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKDVR+G ET ++ +V+DG+LE F+ Y K++ S
Sbjct: 328 MVKDVRSGVETGNVDAVLDGDLEEFVIGYHKWRVS 362
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 4/135 (2%)
Query: 10 DVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINL 69
D+E + RV + + ELA+L+ + A FWD+ A AQ + +++++ I
Sbjct: 7 DIEHMAARVTDAHGFLHIDDKTAELAKLDEEIAAPGFWDDAAHAQGVSKQASNLRETIRE 66
Query: 70 LTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEG 129
+ ++DA + E+ D EA + L+ LD E+T S +D
Sbjct: 67 YDEAAALLEDA----RAALELAGEDEAFAAEADDALARLSDLLDALEITSWFSERFDGGD 122
Query: 130 AVISITAGAGGTDAQ 144
A++++ G+GG +AQ
Sbjct: 123 AILTVNPGSGGLEAQ 137
>gi|15896100|ref|NP_349449.1| peptide chain release factor 2 [Clostridium acetobutylicum ATCC
824]
gi|337738054|ref|YP_004637501.1| peptide chain release factor 2 [Clostridium acetobutylicum DSM
1731]
gi|384459565|ref|YP_005671985.1| peptide chain release factor 2 [Clostridium acetobutylicum EA 2018]
gi|15025890|gb|AAK80789.1|AE007782_3 Protein chain release factor B [Clostridium acetobutylicum ATCC
824]
gi|325510254|gb|ADZ21890.1| peptide chain release factor 2 [Clostridium acetobutylicum EA 2018]
gi|336293316|gb|AEI34450.1| peptide chain release factor 2 [Clostridium acetobutylicum DSM
1731]
Length = 329
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ QTSF+ EV+P L + S D+ I EDL++ RA G GGQ+VNK E+
Sbjct: 161 LVRISPFNANGKRQTSFASVEVLPQLTQ-SQDIVIRPEDLKVDTYRASGAGGQHVNKTES 219
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PTG+ V+C ERSQ +NK A++ LK+KL+ + E +++ + G+ W
Sbjct: 220 AVRITHLPTGIVVQCQSERSQHSNKETAMNMLKSKLVELKERMHKEKVEDLAGELKDMGW 279
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIR+YVF PY +VKD RTG ETS++ +VMDGE++ FI YL
Sbjct: 280 GNQIRSYVFQPYTMVKDHRTGVETSNVDAVMDGEIDKFIIEYL 322
>gi|399028845|ref|ZP_10729968.1| protein chain release factor B [Flavobacterium sp. CF136]
gi|398073440|gb|EJL64614.1| protein chain release factor B [Flavobacterium sp. CF136]
Length = 254
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 108/150 (72%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL+ ++S+++ I D+EI+ SR+ G GGQNVNKVET V++ H PTG+ +
Sbjct: 97 HTSFASVYVYPLV-DDSIEIDINPADIEITTSRSSGAGGQNVNKVETKVQLVHKPTGIQI 155
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C+E RSQ N+ +A+ L+++L I +++ ++ I +K EWG QIRNYV PYK
Sbjct: 156 QCSETRSQQDNRQRAMQMLRSQLYEIELKKQQAQRADIEAGKMKIEWGSQIRNYVMQPYK 215
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRTG+ETSD+ VM+G ++PF+K++L
Sbjct: 216 LVKDVRTGYETSDVDGVMNGNIDPFLKAFL 245
>gi|27262208|gb|AAN87385.1| bacterial peptide chain release factor 2 [Heliobacillus mobilis]
gi|111074980|gb|ABH04839.1| bacterial peptide chain release factor 2 [Heliobacillus mobilis]
Length = 341
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P + ++ +D+QI EDL++ RA G GGQ+VNK E+AVRITHIPTG+ V
Sbjct: 188 HTSFASVEVLPEVSDD-IDIQINSEDLKVDTFRASGAGGQHVNKTESAVRITHIPTGIVV 246
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ L+AKL +++A E+ +++GD +G QIR+YVFHPY
Sbjct: 247 ACQSERSQIQNRATAMRMLQAKLFERQRQEQADEVNRLKGDQQDIAFGSQIRSYVFHPYN 306
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
LVKD RT E + +VMDGE++ F+ +Y+ +
Sbjct: 307 LVKDHRTNCEVGAVYNVMDGEIDDFVSAYMIW 338
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 72/113 (63%), Gaps = 2/113 (1%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
E+ +AELE+ D +FW+++ +AQ+T+Q LT +KDK+ D K +D + +L E
Sbjct: 5 EERIAELELMITDPTFWEDQEQAQKTMQELTGLKDKVKSFFDLYQKWEDLGVLRELGAEE 64
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+ D +L+E I+ + LD++ L LL+GPYD+ A++++ AGAGGT+A
Sbjct: 65 EDPD--ILQEIEEGIQTIQSELDRWHLQLLLNGPYDRNNALVTLHAGAGGTEA 115
>gi|256824891|ref|YP_003148851.1| peptide chain release factor 2 [Kytococcus sedentarius DSM 20547]
gi|256688284|gb|ACV06086.1| bacterial peptide chain release factor 2 (bRF-2) [Kytococcus
sedentarius DSM 20547]
Length = 370
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 182/349 (52%), Gaps = 72/349 (20%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK------------- 64
+E +R L +L+++LA+LE +++ WD+ Q+ A++ V+
Sbjct: 16 MESVREVIDLPRLKEQLADLEQQSSAPDLWDDPENGQKVSAAMSRVRGEVERIESMDSRI 75
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGL--LE------------EAASIIKELNK 110
D + +L + T+ DA T+ + T+E+ + A + LE EA I+
Sbjct: 76 DDLEVLVEMGTEEGDAETLAEATKELAAIQAAVEKLEVRTLLSGEYDEREAVITIRAGAG 135
Query: 111 ALDQFEL------------------TQLLSGPYDKEGAVISIT------------AGAGG 140
+D + T++L Y +E + S+T GG
Sbjct: 136 GVDAADFAEMLMRMYLRWAERHEYPTKVLDTSYAEEAGLKSVTFEVNVPYAYGNLVVEGG 195
Query: 141 TDA-------------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNK 187
T QTSF+ EV+P++ E++ ++IPE ++++ R+ G GGQ+VN
Sbjct: 196 THRLVRISPYDNQGRRQTSFAAVEVVPVI-EQTDSIEIPENEIKVDVFRSSGPGGQSVNT 254
Query: 188 VETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVK 247
++AVR+THIPTG+ V E+SQ+ N+ AL L+++LL+ + + A+E K++ GD +K
Sbjct: 255 TDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLQRKAEEAAERKELAGD-IK 313
Query: 248 AEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
A WG Q+R+YV HPY++VKD+RT HE + SV DG+++ FI++ +++K
Sbjct: 314 ASWGDQMRSYVLHPYQMVKDLRTEHEVGNTQSVFDGDIDGFIEAGIRWK 362
>gi|254555779|ref|YP_003062196.1| peptide chain release factor 2 [Lactobacillus plantarum JDM1]
gi|300767562|ref|ZP_07077472.1| peptide chain release factor RF2 [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308179754|ref|YP_003923882.1| peptide chain release factor 2 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|448820326|ref|YP_007413488.1| Peptide chain release factor 2 [Lactobacillus plantarum ZJ316]
gi|254044706|gb|ACT61499.1| peptide chain release factor 2 [Lactobacillus plantarum JDM1]
gi|300494547|gb|EFK29705.1| peptide chain release factor RF2 [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308045245|gb|ADN97788.1| peptide chain release factor 2 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|448273823|gb|AGE38342.1| Peptide chain release factor 2 [Lactobacillus plantarum ZJ316]
Length = 357
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++++DV I EDL+I RA G GGQ+VNK +AVRITH+PTG+ V
Sbjct: 199 HTSFASVDVMPEL-DDTVDVDIRPEDLKIDVYRASGAGGQHVNKTSSAVRITHVPTGIVV 257
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ AL+ L+AKL EE++A E I+G+ + WG QIR+YVFHPY
Sbjct: 258 ASQAQRSQLQNRQTALNMLRAKLYEREEEKKAKERAAIQGEQMDIGWGSQIRSYVFHPYT 317
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E+ D +VMDG+L+PF+ +YL++K
Sbjct: 318 MVKDHRTNYESHDGQAVMDGDLDPFMDAYLQWK 350
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 4/119 (3%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDD-AVTIVK 85
L L + + E E + A+ FWD++A AQ+ + +K K + ++ D AV
Sbjct: 12 LDALNESIQENEARMAEPGFWDDQAAAQKVIDENNVLKGKYDTFKQLADEVGDLAVAYEL 71
Query: 86 LTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L+EE DA + E + + L Q+ L LL GPYD+ A++ I GAGGT++Q
Sbjct: 72 LSEE---PDAEMQAEFETDFQHAEHDLQQYRLNLLLDGPYDRNNAILEIHPGAGGTESQ 127
>gi|225387178|ref|ZP_03756942.1| hypothetical protein CLOSTASPAR_00930 [Clostridium asparagiforme
DSM 15981]
gi|225046726|gb|EEG56972.1| hypothetical protein CLOSTASPAR_00930 [Clostridium asparagiforme
DSM 15981]
Length = 338
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 109/164 (66%), Gaps = 4/164 (2%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF +VMP + E +DV++ +D+ + R+ G GGQ++NK +A+RITH+PTG+ V
Sbjct: 174 QTSFVSCDVMPDI-EADLDVEVNPDDIRVDTYRSSGAGGQHINKTSSAIRITHMPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ NK KA+ LKAKL ++ +++ A++ IRG+ WG QIR+YV PY
Sbjct: 233 TCQNERSQFQNKDKAMQMLKAKLYMLKQQESAAKAAGIRGEVKDIGWGNQIRSYVLQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDAN 307
+VKD RTG E+ ++ +V+DG ++ FI +YL++ MSL + N
Sbjct: 293 MVKDHRTGEESGNVDAVLDGSIDSFISAYLRW---MSLGCPNKN 333
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ ++ ++ + ++KD + + + + DD ++++ E DA ++ + ++
Sbjct: 6 FWDDPEKSTRMVREVKNLKDDVETYRELEQEYDDIQVMIQMGYE--ENDASVIPDIQEML 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
K L+ L LLSG YDK A++ + AGAGGT++
Sbjct: 64 DHFIKTLEDMRLKLLLSGEYDKNNAILRLNAGAGGTES 101
>gi|389574968|ref|ZP_10165019.1| peptide chain release factor RF2 [Bacillus sp. M 2-6]
gi|388425392|gb|EIL83226.1| peptide chain release factor RF2 [Bacillus sp. M 2-6]
Length = 327
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 105/155 (67%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP EE +D+ I ED+++ RA G GGQ+VN ++AVRITHIPT V V
Sbjct: 174 HTSFVSCDVMPEFNEE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHIPTNVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LK+KL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQTERSQIKNRERAMKMLKSKLYQKRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKD RT E ++ +VMDG+L+ FI +YL+ K S
Sbjct: 293 LVKDHRTNTEMGNVQAVMDGDLDSFIDAYLRSKLS 327
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+++ FW+++ +AQ + +KD +N + D+ L +E D L E
Sbjct: 2 SEADFWNDQQKAQGVINEANALKDYVNTYHELSESHDELQMTHDLLKE--DYDEDLHAEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+K L K ++FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 EKELKNLTKQFNEFELQLLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|294102045|ref|YP_003553903.1| hypothetical protein [Aminobacterium colombiense DSM 12261]
gi|293617025|gb|ADE57179.1| hypothetical protein Amico_1055 [Aminobacterium colombiense DSM
12261]
Length = 368
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 105/153 (68%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +++P LPE+ D++I EDL I R+ G GGQ+VN ++AVRITH P+G+ V
Sbjct: 212 HTSFASVDIVPELPEDE-DIEIRTEDLRIDTYRSSGAGGQHVNMTDSAVRITHFPSGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ NK A+ LK+KL A E+R +E+ I G+ + WG QIR+YV HPY
Sbjct: 271 SCQNERSQHMNKAVAMQVLKSKLYERAIEERRNEMDTIIGEKKEISWGSQIRSYVLHPYT 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RTG ET ++ +V+DG+++ FI +YL++K
Sbjct: 331 LVKDHRTGEETGNVQAVLDGDIDDFIMAYLRWK 363
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 19 EEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMD 78
+E++ S L LE ++ ELE K FW + EA++ Q L +DK++ +
Sbjct: 18 DELQESLDLPILEIKIQELEEKTLKPDFWGS-DEARKVTQELARYQDKLDSWKKIAEDYE 76
Query: 79 DAVTIVK-LTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
D I + L EE D E+ A +K K +++ +L +LLS YD+ A++S+ AG
Sbjct: 77 DLEIIEEMLKEEEDRELQKDFEQKAFSLK---KEIERQQLIELLSEDYDQGNAIVSVHAG 133
Query: 138 AGGTDAQ 144
+GG D+Q
Sbjct: 134 SGGLDSQ 140
>gi|77413702|ref|ZP_00789885.1| peptide chain release factor 2 [Streptococcus agalactiae 515]
gi|77160247|gb|EAO71375.1| peptide chain release factor 2 [Streptococcus agalactiae 515]
Length = 326
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 108/153 (70%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V++ + D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFASVEVMPEL-DDTIEVEVRDYDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 231 SSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT E + + VMDGE+ FI +YLK++
Sbjct: 291 MVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 323
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K K + + + D+ ++++ +E DS L EE +
Sbjct: 6 FWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDEDDS----LKEELEENL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+L+K + +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 62 MQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|325571387|ref|ZP_08146887.1| peptide chain release factor RF2 [Enterococcus casseliflavus ATCC
12755]
gi|325155863|gb|EGC68059.1| peptide chain release factor RF2 [Enterococcus casseliflavus ATCC
12755]
Length = 329
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 105/153 (68%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L + ++DV+I +DL+I RA G GGQ++NK E+AVRITHIP G V
Sbjct: 174 HTSFCSVDVMPEL-DGAIDVEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPKGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+ LKAKL + E++ E +RG+ ++ WG QIR+YVFHPY
Sbjct: 233 ASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQLEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT ET ++ +VMDG+L+ FI +YLK K
Sbjct: 293 MVKDHRTNFETGNVQAVMDGDLDGFIDAYLKLK 325
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD +FWD+ +AQ+ + A K+ + ++++ ++++ +E D + E
Sbjct: 2 ADPTFWDDSEKAQQVINANNANKETYDQFNQLAEELEELEVMLEMIQE--EADPEMEAEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ I +LN+ + +EL+ LL PYD+ A+I + GAGGT++Q
Sbjct: 60 DARIGKLNEKMASYELSMLLDEPYDRNNAIIELHPGAGGTESQ 102
>gi|313889933|ref|ZP_07823573.1| peptide chain release factor 2 [Streptococcus pseudoporcinus SPIN
20026]
gi|416851071|ref|ZP_11908412.1| peptide chain release factor 2 [Streptococcus pseudoporcinus LQ
940-04]
gi|313121699|gb|EFR44798.1| peptide chain release factor 2 [Streptococcus pseudoporcinus SPIN
20026]
gi|356740750|gb|EHI65973.1| peptide chain release factor 2 [Streptococcus pseudoporcinus LQ
940-04]
Length = 327
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + ++++A E+ ++GD + WG QIR+YVF PY
Sbjct: 231 SSTVDRTQYGNRDRAMKMLQAKLYQMEQDKKAEEVNALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT E + + VMDG+++ FI +YLK++
Sbjct: 291 MVKDHRTNFEVAQVDKVMDGDIDGFIDAYLKWR 323
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K K + + + ++ +++ EE D + G LEE S++
Sbjct: 6 FWNDTIAAQKTSQELNELKVKFDTFHNMENLSEETELYMEMLEE-DESVKGELEE--SLL 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
K L++ L +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 63 K-LDQILAAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|227872846|ref|ZP_03991157.1| peptide chain release factor RF2 [Oribacterium sinus F0268]
gi|227841316|gb|EEJ51635.1| peptide chain release factor RF2 [Oribacterium sinus F0268]
Length = 378
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 109/162 (67%), Gaps = 4/162 (2%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF +VMP + E +D++I EED+++ RA G GGQ++NK +AVR+ HIPTG
Sbjct: 214 QTSFVSCDVMPDI-ETDIDIEIREEDIKMEVFRASGAGGQHINKTSSAVRLIHIPTGFVA 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C EERSQL NK KA+ LK KL + +E++ +++ IRG+ WG QIR+YV PY+
Sbjct: 273 ACQEERSQLQNKNKAMQMLKTKLYLKEKEEQEAKLAGIRGEVKDNGWGSQIRSYVLQPYR 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASD 305
+VKD+RTG E+ + +V+DG+++ FI +YLK+ M L D
Sbjct: 333 MVKDLRTGEESGNTDAVLDGDIDRFISAYLKW---MQLGCPD 371
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M +F + ++ + + ++++ A+ L K + EL+ + FW + +A +
Sbjct: 1 MIEFDQFKSELSSKEEPLQQLEAALDLDTKRKRIIELDRMMEEPDFWGDPEKANKLSTEA 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+KD++ T K +D ++++ +E D ++ E ++ ++ LDQ T L
Sbjct: 61 RHLKDELEGFTALKGNYEDIEALIQMGKE--ENDDSVIPEIRELLDSFSERLDQMNTTLL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDA 143
LSG YD ++ + AGAGGT+A
Sbjct: 119 LSGEYDSMNVILRLNAGAGGTEA 141
>gi|256006007|ref|ZP_05430946.1| peptide chain release factor 2 [Clostridium thermocellum DSM 2360]
gi|281417086|ref|ZP_06248106.1| peptide chain release factor 2 [Clostridium thermocellum JW20]
gi|419723549|ref|ZP_14250667.1| peptide chain release factor 2 [Clostridium thermocellum AD2]
gi|419725319|ref|ZP_14252368.1| peptide chain release factor 2 [Clostridium thermocellum YS]
gi|255990030|gb|EEU00173.1| peptide chain release factor 2 [Clostridium thermocellum DSM 2360]
gi|281408488|gb|EFB38746.1| peptide chain release factor 2 [Clostridium thermocellum JW20]
gi|380771283|gb|EIC05154.1| peptide chain release factor 2 [Clostridium thermocellum YS]
gi|380780424|gb|EIC10104.1| peptide chain release factor 2 [Clostridium thermocellum AD2]
Length = 357
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 153/278 (55%), Gaps = 21/278 (7%)
Query: 23 ASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLLTDFKTKMDD 79
A G + +KE L ++ + +D + A TL A T+ +D + +L T+ +
Sbjct: 81 AVEGFKAFKKEFEALRLETLLTGQYD-KNNAILTLHAGAGGTEAQDWVQMLFRMYTRWAE 139
Query: 80 AVTI-VKLTEEMDSTDAGLLEEAASIIKELNKALDQFE--LTQLLS-GPYDKEGAVISIT 135
VK+ + +D +AG+ +I E + E + +L+ P+D G
Sbjct: 140 KKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKSEKGVHRLVRISPFDASGR----- 194
Query: 136 AGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRIT 195
TSF+ +VMP L ++ ++V I +DL I R+ G GGQ++NK E+AVRIT
Sbjct: 195 -------RHTSFASLDVMPELNDD-IEVHINPDDLRIDTYRSSGAGGQHINKTESAVRIT 246
Query: 196 HIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIR 255
HIPTG+ V C ERSQ NK A+ LKAKL+ + E + +I+ ++G ++ WG QIR
Sbjct: 247 HIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDLKGIQLEIAWGSQIR 306
Query: 256 NYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+YVF PY LVKD RT +E ++ +VMDGEL+ FI SYL
Sbjct: 307 SYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYL 344
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 33 ELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDS 92
++ ELE KA++ FW++ +Q+ LQ + ++ K+ ++ +D +T+ +L ++
Sbjct: 15 QIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKLVSQWEDLITLCELG--IEE 72
Query: 93 TDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D ++ EA K K + L LL+G YDK A++++ AGAGGT+AQ
Sbjct: 73 QDESVIPEAVEGFKAFKKEFEALRLETLLTGQYDKNNAILTLHAGAGGTEAQ 124
>gi|158321505|ref|YP_001514012.1| peptide chain release factor 2 [Alkaliphilus oremlandii OhILAs]
gi|158141704|gb|ABW20016.1| peptide chain release factor 2 [Alkaliphilus oremlandii OhILAs]
Length = 340
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP + ++S+D+QI DL I RA G GGQ+VNK ++AVRITHIPTG+ V
Sbjct: 184 HTSFASVDVMPEI-DDSVDIQINPNDLRIDTYRASGSGGQHVNKTDSAVRITHIPTGIVV 242
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ +N+ A+ L +KL+ + E ++ +I+ ++G+ + WG QIR+YVF+PY
Sbjct: 243 QCQNERSQHSNRETAMKMLISKLIEVKETEQKEKIEDLQGEYNQIAWGSQIRSYVFNPYN 302
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E +I +VMDGE++ FI YLK
Sbjct: 303 LVKDHRTNVEMGNIQAVMDGEIDEFINGYLK 333
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
ELE K ++ FW++ AQ L+ +D I +D ++ E+ D +
Sbjct: 7 ELEYKMSEEDFWNDPENAQSVLKKAKGYRDTIEEYNQLHVDHEDLEMMISFIEDGDES-- 64
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
++ ++ L + + ++ LL G YDK A+ISI AG GG DAQ
Sbjct: 65 -FQKDLLKGLEALENRVREIKIATLLKGEYDKNNAIISIHAGTGGLDAQ 112
>gi|225011020|ref|ZP_03701485.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-3C]
gi|225004825|gb|EEG42782.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-3C]
Length = 288
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 103/150 (68%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL+ ++S+++ I D+ +F+R+GG GGQNVNKVET V +TH PTG+ +
Sbjct: 130 HTSFASVYVYPLI-DDSIEIVINPADISWAFARSGGAGGQNVNKVETKVILTHHPTGIII 188
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+E RSQL N+ A+ LK++L I +R +I +K EWG QIRNYV HPYK
Sbjct: 189 HNSETRSQLDNRENAMKLLKSQLYEIELRKRQEARSEIESSKMKIEWGSQIRNYVLHPYK 248
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVR+G ET D+ +V+DG L+PF+K +L
Sbjct: 249 LVKDVRSGTETGDVDAVLDGHLDPFLKGFL 278
>gi|407980384|ref|ZP_11161173.1| peptide chain release factor RF2 [Bacillus sp. HYC-10]
gi|407412865|gb|EKF34620.1| peptide chain release factor RF2 [Bacillus sp. HYC-10]
Length = 327
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 105/155 (67%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP EE +D+ I ED+++ RA G GGQ+VN ++AVRITHIPT V V
Sbjct: 174 HTSFVSCDVMPEFNEE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHIPTNVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LK+KL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQTERSQIKNRERAMKMLKSKLYQKRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKD RT E ++ +VMDG+L+ FI +YL+ K S
Sbjct: 293 LVKDHRTNTEMGNVQAVMDGDLDSFIDAYLRSKLS 327
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+++ FW+++ +AQ + +KD +N + ++ L +E D L E
Sbjct: 2 SEADFWNDQQKAQGVINEANALKDYVNTYHELSESHEELQMTHDLLKE--DYDEELHAEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+K L K ++FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 EKELKSLTKQFNEFELQLLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|407010011|gb|EKE25026.1| hypothetical protein ACD_5C00323G0003 [uncultured bacterium]
Length = 231
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 121/189 (64%), Gaps = 9/189 (4%)
Query: 118 TQLLSGPY-----DKEGAV---ISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEED 169
T +SGPY E V + ++ + QTSF+ E++P++ ++ +V I +D
Sbjct: 42 TMEVSGPYAYGNLKSEAGVHRLVRLSPFNADSLRQTSFAIVEILPVI-DDIAEVNIQPQD 100
Query: 170 LEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVI 229
L I RA G GGQ+VN ++AVRITHIPTGV V C ERSQL NK +A+ LKA++
Sbjct: 101 LVIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVTCQSERSQLQNKEQAMKVLKARIHQK 160
Query: 230 AEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFI 289
EQ+ E +++RG+ AEWG QIR+YV HPYK+VKD RT ETSD V++G+L F+
Sbjct: 161 YLEQQELEKQKLRGEVKSAEWGSQIRSYVLHPYKMVKDHRTKFETSDAEKVLEGDLNGFM 220
Query: 290 KSYLKYKYS 298
+SYL+++ S
Sbjct: 221 ESYLRWRAS 229
>gi|157693929|ref|YP_001488391.1| peptide chain release factor RF2 [Bacillus pumilus SAFR-032]
gi|157682687|gb|ABV63831.1| peptide chain release factor RF2 [Bacillus pumilus SAFR-032]
Length = 327
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 105/155 (67%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP EE +D+ I ED+++ RA G GGQ+VN ++AVRITHIPT V V
Sbjct: 174 HTSFVSCDVMPEFNEE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHIPTNVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LK+KL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQTERSQIKNRERAMKMLKSKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKD RT E ++ +VMDG+L+ FI +YL+ K S
Sbjct: 293 LVKDHRTNTEMGNVQAVMDGDLDSFIDAYLRSKLS 327
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+++ FW+++ +AQ + +KD +N + ++ L +E D L E
Sbjct: 2 SEADFWNDQQKAQGVINEANALKDNVNAYHELSESHEELQMTHDLLKE--DYDEELHVEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+K L K ++FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 EKELKNLTKQFNEFELQLLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|383788715|ref|YP_005473284.1| peptide chain release factor 2 [Caldisericum exile AZM16c01]
gi|381364352|dbj|BAL81181.1| peptide chain release factor 2 [Caldisericum exile AZM16c01]
Length = 363
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 107/153 (69%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P L E D++I E+DL+I RA G GGQNV KVETAVRITHIPTG+T
Sbjct: 211 HTSFALVEVVPDLGEVE-DIEIDEKDLKIEIFRASGHGGQNVQKVETAVRITHIPTGITA 269
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C +ERSQ NK A+ LK++L+++ ++++ +K ++G EWG +IR+YV PYK
Sbjct: 270 TCQDERSQTQNKAMAMKILKSRLMLLEKKKQEETLKGLKGAFRSIEWGNEIRSYVLQPYK 329
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RTG E ++ V++GEL+ FI +YLK K
Sbjct: 330 LVKDHRTGVEIGNVDEVLEGELDEFIWAYLKSK 362
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 72/129 (55%), Gaps = 4/129 (3%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
+++E + L++ E + LE K + FW + +++ETL+ L+ K +I +T
Sbjct: 15 EKIEALLDPVWLKEHEDAVKALESKTLNPDFWKS-PDSKETLKLLSMTKKEIAKFKQLET 73
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
+D T+++L EE + +EA ++ + NK + +FE+ + LS PYD A +S +
Sbjct: 74 VKNDLNTLLELYEEAEEHLD---KEAQEVLFDANKLVKEFEIERFLSEPYDDLNAFVSFS 130
Query: 136 AGAGGTDAQ 144
+GAGG DAQ
Sbjct: 131 SGAGGVDAQ 139
>gi|167748494|ref|ZP_02420621.1| hypothetical protein ANACAC_03238 [Anaerostipes caccae DSM 14662]
gi|317471975|ref|ZP_07931307.1| peptide chain release factor 2 protein [Anaerostipes sp. 3_2_56FAA]
gi|167652486|gb|EDR96615.1| peptide chain release factor 2 [Anaerostipes caccae DSM 14662]
gi|316900379|gb|EFV22361.1| peptide chain release factor 2 protein [Anaerostipes sp. 3_2_56FAA]
Length = 367
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ +VMP + +E ++V+I +ED+ I RA G GGQ++NK ++A+RITHIPTG+ V
Sbjct: 214 QTSFASCDVMPEI-DEDLNVEIADEDIRIDTYRASGAGGQHINKTDSAIRITHIPTGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK +A+ LK KL ++ E+Q ++ IRGD WG QIR+YV PY
Sbjct: 273 QCQNERSQHKNKDQAMKMLKTKLYLLKEQQHLEKLSDIRGDVGDNGWGSQIRSYVLQPYT 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
+VKD RT E+ + +V+DG+L+ F+ +YL +
Sbjct: 333 MVKDHRTNKESGNPSAVLDGDLDGFMNAYLAW 364
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L+ + + + +E++ S GL++ ++ + +LE+ FW++ E+Q+ ++ + +KD+
Sbjct: 7 LKYSLNSYREPLEKLSGSLGLEEKKERIEQLELDMEAPGFWEDLEESQKVVREVKGLKDQ 66
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ K + +D T++++ E + + + A E A + ++ LLSG YD
Sbjct: 67 VEGYEGLKGQFEDIETLIEMASEEEDEELAAETQEA--FAEFETAYENLRISTLLSGEYD 124
Query: 127 KEGAVISITAGAGGTDA 143
K A++S+ AGAGGT++
Sbjct: 125 KNNAILSLHAGAGGTES 141
>gi|167628822|ref|YP_001679321.1| peptide chain release factor 2 [Heliobacterium modesticaldum Ice1]
gi|167591562|gb|ABZ83310.1| peptide chain release factor 2 [Heliobacterium modesticaldum Ice1]
Length = 333
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P + + ++QI EDL++ RAGG GGQ+VNK E+AVRITHIPTG+ V
Sbjct: 175 HTSFASLEVLPEVSD-GAEIQIRPEDLKVDTFRAGGAGGQHVNKTESAVRITHIPTGIVV 233
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ L+AKL +++ +E+ +++GD +G QIR+YVFHPY
Sbjct: 234 ACQSERSQIQNRATAMRMLQAKLFERQRQEQEAEVNRLKGDQQDIAFGSQIRSYVFHPYN 293
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
LVKD RT E ++ +VMDGEL+ FI +YL +
Sbjct: 294 LVKDHRTNTEVGNVHAVMDGELDEFISAYLVW 325
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 63/101 (62%), Gaps = 2/101 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ FWD+ AQ+T+Q LT +KDK+ D +++ +D + +L E DA +L E
Sbjct: 4 EPGFWDDTERAQKTMQELTGLKDKVKAYRDLRSQWEDLCVLRELGAE--ENDAEILAEIE 61
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+ I+ + LD++ L LL+GPYD+ A++++ AGAGGT+A
Sbjct: 62 AGIQTITAELDRWHLELLLNGPYDRNNALLTLHAGAGGTEA 102
>gi|392988944|ref|YP_006487537.1| peptide chain release factor 2 [Enterococcus hirae ATCC 9790]
gi|392336364|gb|AFM70646.1| peptide chain release factor 2 [Enterococcus hirae ATCC 9790]
Length = 326
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 104/151 (68%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L +E++DV I +DL+I RA G GGQ++NK E+AVRITH+PTG V
Sbjct: 174 HTSFCSVDVMPEL-DETIDVAINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+S LKAKL + E++ E +RG+ + WG QIR+YVFHPY
Sbjct: 233 ASQAQRSQLKNREQAMSMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDG+L+ FI YLK
Sbjct: 293 MVKDHRTNVETGNVQAVMDGDLDLFIDGYLK 323
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FWD+ AQ+ + K+ + ++++ +V++ +E DA + +EA
Sbjct: 2 AEPGFWDDSEAAQKVINENNTNKETYDQFNALAEELEELALMVEMLQE--EPDAQMQQEA 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
I+ L++ + +EL LL GPYD+ A++ + GAGGT++Q
Sbjct: 60 EDRIQLLDEKMKTYELAMLLDGPYDRNHAIVELHPGAGGTESQ 102
>gi|334881786|emb|CCB82692.1| peptide chain release factor 2 (RF-2) [Lactobacillus pentosus
MP-10]
gi|339637510|emb|CCC16442.1| peptide chain release factor 2 (RF-2) [Lactobacillus pentosus IG1]
Length = 357
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/153 (50%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++++D+ + EDL+I RA G GGQ+VNK +AVRITHIPTG+ V
Sbjct: 199 HTSFASVDVMPEL-DDTVDIDVRPEDLKIDVYRASGAGGQHVNKTSSAVRITHIPTGIVV 257
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ AL+ L+AKL EE++A E I+G+ + WG QIR+YVFHPY
Sbjct: 258 ASQAQRSQLQNRQTALNMLRAKLYEREEEKKAKERAAIQGEQMDIGWGSQIRSYVFHPYT 317
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E+ D +VMDG+L+PF+ +YL++K
Sbjct: 318 MVKDHRTNYESHDGQAVMDGDLDPFMDAYLQWK 350
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 4/119 (3%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDD-AVTIVK 85
L L + + E E + A+ FWD++A AQ+ + +K K ++ D AV
Sbjct: 12 LDALNESIQENEARMAEPGFWDDQAAAQKVIDDNNALKSKYETFKQLSDEVGDLAVAYEL 71
Query: 86 LTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L+EE DA + E + K L Q+ L+ LL GPYD+ A++ I GAGGT++Q
Sbjct: 72 LSEE---PDAEMQAEFETDFKHAEHDLQQYRLSLLLDGPYDRNNAILEIHPGAGGTESQ 127
>gi|187250476|ref|YP_001874958.1| peptide chain release factor 2 [Elusimicrobium minutum Pei191]
gi|186970636|gb|ACC97621.1| Peptide chain release factor 2 [Elusimicrobium minutum Pei191]
Length = 371
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/165 (48%), Positives = 112/165 (67%), Gaps = 1/165 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ + TSF+ +V+P + +E E+DLE+ R+GG GGQNVNKVET
Sbjct: 203 LVRISPFDANSRRHTSFASCDVLPDIEDEIKIEI-EEKDLEVDTFRSGGAGGQNVNKVET 261
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRI HIPTG+ V C ERSQL N+ A+ L+AKL I +++ SE+++ G W
Sbjct: 262 AVRIKHIPTGIVVACQIERSQLQNRQTAMKMLRAKLYQIEADKKRSEMEKHYGQKGDIAW 321
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
G QIR+YVF PY+LVKD+RTG+ETS + +VMDG+L+ F++SYL Y
Sbjct: 322 GHQIRSYVFMPYQLVKDLRTGYETSQVQAVMDGDLDAFMQSYLDY 366
>gi|260587039|ref|ZP_05852952.1| peptide chain release factor 2 [Blautia hansenii DSM 20583]
gi|331082810|ref|ZP_08331932.1| peptide chain release factor 2 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260542529|gb|EEX23098.1| peptide chain release factor 2 [Blautia hansenii DSM 20583]
gi|330400139|gb|EGG79788.1| peptide chain release factor 2 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 372
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ QTSF +VMP + EE +DV+I +DL I R+ G GGQ++NK +
Sbjct: 201 LVRISPFNAAGKRQTSFVSCDVMPDI-EEDVDVEINPDDLRIDTYRSSGAGGQHINKTSS 259
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
A+RITH+PTG+ V+C ERSQ NK KA+ LKAKL ++ +++ ++ I+G+ + W
Sbjct: 260 AIRITHLPTGIVVQCQNERSQFQNKDKAMQMLKAKLYLLKQQENEKKLSGIQGELTEIGW 319
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
G QIR+YV PY +VKD RT ET ++ +VM+G ++ FI +YLK+
Sbjct: 320 GNQIRSYVMQPYTMVKDHRTNEETGNVDAVMNGNIDNFINAYLKW 364
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 73/133 (54%), Gaps = 2/133 (1%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
+ ++ ++E+R S L+ EK + ELE + FWDN +Q+ ++ L+ +K + +
Sbjct: 11 LNGYTEPLKEVRDSLDLENKEKRVEELEREMEAPGFWDNAERSQKMMKELSALKGDMEIY 70
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
+ + ++ ++++ E D ++ + ++ E + + + LLSG YDK+ A
Sbjct: 71 HKLQNQKEEIELMIEMGYE--ENDPSIVPDIQEMLDEFIQDFEHIRIKTLLSGEYDKDNA 128
Query: 131 VISITAGAGGTDA 143
++++ AGAGGT++
Sbjct: 129 IVTLHAGAGGTES 141
>gi|169335448|ref|ZP_02862641.1| hypothetical protein ANASTE_01862 [Anaerofustis stercorihominis DSM
17244]
gi|169258186|gb|EDS72152.1| peptide chain release factor 2 [Anaerofustis stercorihominis DSM
17244]
Length = 364
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 108/164 (65%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ + TSF+ +V P + E+ ++++I DL+I RAGG GGQ+VNK ++
Sbjct: 201 LVRISPFDSNSRRHTSFASVDVEPEIKED-INLEINPSDLKIDTYRAGGAGGQHVNKTDS 259
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PT + V C ERSQ NK A+ LK KL I E+ +I +I+GD + W
Sbjct: 260 AVRITHLPTKIVVSCQNERSQFQNKETAMKILKGKLYKILMEEHKEKIDEIKGDYGQIAW 319
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIR+YVFHPY +VKD RT ETS++ SVMDG++ FI ++LK
Sbjct: 320 GNQIRSYVFHPYSMVKDHRTKTETSNVQSVMDGDINIFIDAFLK 363
>gi|338814372|ref|ZP_08626393.1| peptide chain release factor 2 [Acetonema longum DSM 6540]
gi|337273694|gb|EGO62310.1| peptide chain release factor 2 [Acetonema longum DSM 6540]
Length = 335
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ ++MP + +E++++ I DL++ RA G GGQ++NK ++AVR+THIPTG+ V
Sbjct: 178 HTSFAAVDIMPEI-DENVEIAINPADLKVDTYRASGAGGQHINKTDSAVRMTHIPTGIIV 236
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ+ N+ + + L+A+L + + ++A + +I G+ EWG QIR+YVFHPY
Sbjct: 237 QCQNERSQIQNREQCMKLLRARLFELEQRKQAEKKAEIGGEYQAIEWGSQIRSYVFHPYS 296
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
L KD RT ET +I +VMDGELE FI++YLK
Sbjct: 297 LAKDHRTNCETGNIQAVMDGELEAFIEAYLK 327
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K FWD AQ+ +Q LT +KD + + +D T+ +L MD D
Sbjct: 1 MENKIQAPGFWDEPVGAQKVMQELTGLKDTAADYYAMRRRYEDMETLWRLG--MDEKDES 58
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ + +++L ++ ELT +LSG YD A++++ AGAGGT+AQ
Sbjct: 59 VYSDVTEAMQQLQAEIEHLELTLMLSGEYDANNAIVTLHAGAGGTEAQ 106
>gi|313672869|ref|YP_004050980.1| peptide chain release factor 2 [Calditerrivibrio nitroreducens DSM
19672]
gi|312939625|gb|ADR18817.1| bacterial peptide chain release factor 2 (bRF-2) [Calditerrivibrio
nitroreducens DSM 19672]
Length = 371
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 105/156 (67%), Gaps = 1/156 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V+P + E+ +D+ I E DL+I RAGG GGQ+VN ++AVRITH+PTG+ V
Sbjct: 210 HTSFASVFVLPEI-EDDVDIVINESDLKIDTFRAGGAGGQHVNTTDSAVRITHLPTGIVV 268
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ NK AL LK+KL + E++ E ++ + +G QIR+YV HPYK
Sbjct: 269 SCQNERSQHKNKAHALKILKSKLYELEMEKKNKEKNELESSKTEINFGSQIRSYVLHPYK 328
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSM 299
+VKD+RT HET + +V+DGEL+ FI+SYL YK M
Sbjct: 329 MVKDLRTRHETGNPDAVLDGELDDFIRSYLFYKAGM 364
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
Query: 28 QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT 87
+ L+++L+ +E + D FW ++ E++ L+ + +K ++ + +D +++L
Sbjct: 27 EHLKEKLSNIEKQTHDPDFWSSK-ESKHLLKEQSSIKKFLDDWYYLVRRFEDMDVLLELQ 85
Query: 88 EEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EE ++ A + E EL + ++ FEL +L+G D A+++I +GAGGT+A
Sbjct: 86 EEGENVAAEIEEN----FTELKQIVNDFELKLILNGENDINNAILTIHSGAGGTEAN 138
>gi|385779195|ref|YP_005688360.1| peptide chain release factor 2 [Clostridium thermocellum DSM 1313]
gi|316940875|gb|ADU74909.1| Peptide chain release factor 2 [Clostridium thermocellum DSM 1313]
Length = 375
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 153/278 (55%), Gaps = 21/278 (7%)
Query: 23 ASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLLTDFKTKMDD 79
A G + +KE L ++ + +D + A TL A T+ +D + +L T+ +
Sbjct: 99 AVEGFKAFKKEFEALRLETLLTGQYD-KNNAILTLHAGAGGTEAQDWVQMLFRMYTRWAE 157
Query: 80 AVTI-VKLTEEMDSTDAGLLEEAASIIKELNKALDQFE--LTQLLS-GPYDKEGAVISIT 135
VK+ + +D +AG+ +I E + E + +L+ P+D G
Sbjct: 158 KKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKSEKGVHRLVRISPFDASGR----- 212
Query: 136 AGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRIT 195
TSF+ +VMP L ++ ++V I +DL I R+ G GGQ++NK E+AVRIT
Sbjct: 213 -------RHTSFASLDVMPELNDD-IEVHINPDDLRIDTYRSSGAGGQHINKTESAVRIT 264
Query: 196 HIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIR 255
HIPTG+ V C ERSQ NK A+ LKAKL+ + E + +I+ ++G ++ WG QIR
Sbjct: 265 HIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDLKGIQLEIAWGSQIR 324
Query: 256 NYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+YVF PY LVKD RT +E ++ +VMDGEL+ FI SYL
Sbjct: 325 SYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYL 362
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 78/144 (54%), Gaps = 2/144 (1%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M + L+ +++ ++E+ S + + ++ ELE KA++ FW++ +Q+ LQ +
Sbjct: 1 MLELEQLKLEIDDFKQNLDEMGKSLDIASIGNQIEELEQKASEPDFWNDTENSQKILQKI 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
++ K+ ++ +D +T+ +L ++ D ++ EA K K + L L
Sbjct: 61 KSLRSKVERYNKLVSQWEDLITLCELG--IEEQDESVIPEAVEGFKAFKKEFEALRLETL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQ 144
L+G YDK A++++ AGAGGT+AQ
Sbjct: 119 LTGQYDKNNAILTLHAGAGGTEAQ 142
>gi|222056175|ref|YP_002538537.1| hypothetical protein Geob_3093 [Geobacter daltonii FRC-32]
gi|221565464|gb|ACM21436.1| hypothetical protein Geob_3093 [Geobacter daltonii FRC-32]
Length = 370
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 173/356 (48%), Gaps = 77/356 (21%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK------ 64
VEA ++R+ +R S + L +++ ELE + A FWD+ AQ+ L+ T ++
Sbjct: 9 VEAMAERINNLRGSLDIDSLREDIQELESRIAAPGFWDDNEAAQKVLKERTVMEKTLASW 68
Query: 65 DKIN-------LLTDFKTKMDDAVTIVKLTEEMDSTDAGLLE-----------EAASIIK 106
D++N +L + ++ +D T+ ++ + D + GL++ +A+S
Sbjct: 69 DRLNRQVEDIRVLIELGSEAEDEATLAEVHDLNDQLEKGLVDAEFQKMLSGPHDASSCFF 128
Query: 107 ELNKALD------------------------QFELTQLLSGPYDKEGAVISITAGAGGTD 142
+N + E+T SG E V +T G
Sbjct: 129 SINSGAGGTESQDWAEMLLRMYLRYCERKGWKTEITDYQSG---DEAGVKGVTFSVSGEY 185
Query: 143 A-------------------------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRA 177
A TSF+ V P + E+ +DV+I E DL + R+
Sbjct: 186 AYGYLKAEVGIHRLVRISPFDSNARRHTSFASVFVFPEI-EDDIDVKIVETDLRVDTFRS 244
Query: 178 GGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASE 237
G GGQ+VN ++A+RITHIPTG+ V C ERSQ N+ A+ L+AKL ++R S+
Sbjct: 245 SGAGGQHVNTTDSAIRITHIPTGIVVACQTERSQHMNRATAMRVLRAKLYERELQERESQ 304
Query: 238 IKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+I G+ + WG QIR+YV HPYK+VKD+RTG E+ + +V+DGELE FI ++L
Sbjct: 305 AAEIAGEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGELEQFIIAFL 360
>gi|58336996|ref|YP_193581.1| peptide chain release factor 2 [Lactobacillus acidophilus NCFM]
gi|227903556|ref|ZP_04021361.1| peptide chain release factor RF2 [Lactobacillus acidophilus ATCC
4796]
gi|58254313|gb|AAV42550.1| peptide chain release factor 2 [Lactobacillus acidophilus NCFM]
gi|227868443|gb|EEJ75864.1| peptide chain release factor RF2 [Lactobacillus acidophilus ATCC
4796]
Length = 332
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 104/152 (68%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P + + P+ DL I R+ G GGQ++NK +AVRITH+PTG+
Sbjct: 174 HTSFASVEVIPEIDDSIKIDIDPK-DLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVT 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQ+ N+ A++ L+AKL + EE++ + + ++GD + WG QIR+YVFHPY
Sbjct: 233 TSQAQRSQIQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGWGSQIRSYVFHPYN 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
LVKD+RTG+ET+D VMDG+L+PFI SYL++
Sbjct: 293 LVKDLRTGYETADTTGVMDGKLQPFIYSYLQW 324
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A FWDN+ +AQ+ + +K+K + ++ +T + L E D+ L E
Sbjct: 2 AQPDFWDNQEKAQKLISENNVLKEKRDSFLKLSEDYENELTALDLLRE--EPDSDLQTEV 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+ + L +A +EL LLSG YD A+ I GAGGT+A
Sbjct: 60 ETDLIALQEAFHNYELDLLLSGKYDSHNALFEIHPGAGGTEA 101
>gi|395203753|ref|ZP_10394846.1| peptide chain release factor 2 [Propionibacterium humerusii P08]
gi|422439222|ref|ZP_16516045.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA3]
gi|422470709|ref|ZP_16547209.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA2]
gi|422574464|ref|ZP_16650018.1| peptide chain release factor 2 [Propionibacterium acnes HL044PA1]
gi|313837551|gb|EFS75265.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA2]
gi|314927570|gb|EFS91401.1| peptide chain release factor 2 [Propionibacterium acnes HL044PA1]
gi|314972490|gb|EFT16587.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA3]
gi|328907839|gb|EGG27602.1| peptide chain release factor 2 [Propionibacterium humerusii P08]
Length = 371
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 166/334 (49%), Gaps = 73/334 (21%)
Query: 33 ELAELEMKAADSSFWDNRAEAQ-------------ETLQALTDVKDKINLLTDFKTKMDD 79
E+A+LE + A + WD++ AQ E L+ L + +++L +F T DD
Sbjct: 35 EIADLEKQVAAPNLWDDQENAQWVTSRLSALQAEIERLERLRARIEDVHVLLEFATADDD 94
Query: 80 AVTI-------VKLTEEMDSTDAGLL-------EEAASIIKELNKALDQFELTQLLSGPY 125
++ VKL EE+D+ + +L EA I+ +D + ++L Y
Sbjct: 95 KESLTEATSETVKLREEIDALEVRILLSGQYDEREAVVTIRSEAGGVDAADFAEMLLRMY 154
Query: 126 ----DKEGAVISITAGAGGTDA-------------------------------------- 143
++ G + I + +A
Sbjct: 155 LRWAERHGYKVEILDTSYAEEAGIKSATFVVHAPFSYGTLSVEQGTHRLVRISPFDNQGR 214
Query: 144 -QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVT 202
QTSF+G EV+P++ EE+ V IPE DL + A G GGQ VN ++AVR+TH+PTG+
Sbjct: 215 RQTSFAGVEVLPVV-EETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLTHLPTGIV 273
Query: 203 VRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPY 262
V C ERSQ+ NK AL L+AKLL A E++ +E+ ++ + WG Q+R+YV HPY
Sbjct: 274 VSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSEG--NSWGAQMRSYVLHPY 331
Query: 263 KLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
++VKD+RT HE + +V DG+++ FI + ++++
Sbjct: 332 QMVKDLRTNHEVGNTDAVFDGDIDDFIGAGIRWR 365
>gi|258645336|ref|ZP_05732805.1| peptide chain release factor 2 [Dialister invisus DSM 15470]
gi|260402685|gb|EEW96232.1| peptide chain release factor 2 [Dialister invisus DSM 15470]
Length = 330
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS +VMP + ++ +++ + D+ + + RA G GGQ++NK +AVR+THIPTG+
Sbjct: 174 HTSFSAVDVMPEIGDD-IEIDLNMADVRVDYYRASGAGGQHINKTSSAVRMTHIPTGIVA 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ NK + L LKAKL + ++R K I G+ EWG QIR+YVF PY
Sbjct: 233 ACQNERSQFQNKEQCLRLLKAKLFELEMQKREQVKKGIEGEQQAIEWGSQIRSYVFQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RTG ET +I SVMDG L PFI+ +LK+K
Sbjct: 293 LVKDNRTGIETGNIQSVMDGGLNPFIEGFLKHK 325
>gi|257457828|ref|ZP_05622987.1| peptide chain release factor 2 [Treponema vincentii ATCC 35580]
gi|257444541|gb|EEV19625.1| peptide chain release factor 2 [Treponema vincentii ATCC 35580]
Length = 363
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 112/176 (63%), Gaps = 1/176 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
+I I+ TSFS V P+L +++++V I EDL + RAGG GGQ+VNK ++
Sbjct: 187 LIRISPFDANARRHTSFSSVYVFPVL-DDTIEVNIRPEDLRVDTYRAGGAGGQHVNKTDS 245
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVR+TH+PTG+ V C ERSQ++N+ A+S LKA+L ++ E + + W
Sbjct: 246 AVRLTHLPTGIVVACQNERSQISNRATAMSMLKARLYEYYRNEKEKENAKFAAEKKGISW 305
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDA 306
G QIR+Y+F PY +VKD RT HET +I +VMDG+++ FI+ +LK +++ L D+
Sbjct: 306 GNQIRSYIFQPYTMVKDHRTKHETGNIQAVMDGDIDGFIEDFLKKQWANQLMYEDS 361
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
++K +AE E A FW++ +A++ L + +K++I ++D T+ +LT+E
Sbjct: 14 VKKRIAEKEAVAGQEGFWNDPKKAEKLLTEIKKLKNRIEPWETLIADIEDLQTLYELTQE 73
Query: 90 M-DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
D+ +A ++E +KEL + ++ LLS D A +++ AGAGGT+A
Sbjct: 74 AGDADNADSVQEIDMSLKELQERFEKLNTLALLSDEVDGSDAFLTVHAGAGGTEA 128
>gi|379727562|ref|YP_005319747.1| peptide chain release factor 2 [Melissococcus plutonius DAT561]
gi|376318465|dbj|BAL62252.1| peptide chain release factor 2 [Melissococcus plutonius DAT561]
Length = 328
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 108/153 (70%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF ++MP L +E++++ I +DL++ RA G GGQ++NK E+AVRITHIPT V
Sbjct: 174 HTSFCSIDIMPEL-DETIEIDINPDDLKVDTYRASGAGGQHINKTESAVRITHIPTSTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+ LK+KL + E++A E ++RG+ ++ WG QIR+YVFHPY
Sbjct: 233 SSQAQRSQLKNREQAMKTLKSKLYQLEMEKKAQESAELRGEQLEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT ET ++ +VMDGE++ FI +YLK++
Sbjct: 293 MVKDHRTNMETGNVQAVMDGEIDNFIDAYLKWQ 325
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 72/141 (51%), Gaps = 7/141 (4%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD +FW+N +AQ+ + K+K ++++ + +L +++D D + E
Sbjct: 2 ADVNFWNNAKQAQQIINETNREKEKYQQFNQLADELEELEIMYEL-QQVD-FDEAIQTEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQTSFSGAEVMPLLPEESM 161
IK+L K L +EL LL+GPYDK A++ GAGGT++Q S M + ES
Sbjct: 60 IQRIKQLEKQLKTYELALLLNGPYDKNNAIVEFHPGAGGTESQDWGSMLLRMYMRWAESR 119
Query: 162 DVQIPEEDLEISFSRAGGKGG 182
+ QI E+ +AG + G
Sbjct: 120 NFQI-----EVLDYQAGDEAG 135
>gi|257785087|ref|YP_003180304.1| peptide chain release factor 2 [Atopobium parvulum DSM 20469]
gi|257473594|gb|ACV51713.1| peptide chain release factor 2 [Atopobium parvulum DSM 20469]
Length = 369
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 108/153 (70%), Gaps = 2/153 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EV+P+LPE+ ++V I DL I A G GGQ VN ++AVRITHIPTG V
Sbjct: 212 QTSFAGVEVLPVLPED-IEVDIDPNDLRIDVYHASGPGGQGVNTTDSAVRITHIPTGTVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQL NK A++ L+++L I +E+R +E+ ++RG + +G QIR+YV +PY+
Sbjct: 271 TCQNERSQLQNKAAAMNILRSRLYEIEKEKREAELDELRGPKREISFGNQIRSYVLYPYQ 330
Query: 264 LVKDVRTGHETSDIVSVM-DGELEPFIKSYLKY 295
L+KD+RTG ET ++ SV DG+L+ FI +Y ++
Sbjct: 331 LIKDLRTGAETGNVESVFSDGDLDQFIIAYHRW 363
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
++A ++R+ EI L + ++++ELE ++A +FWD+ AQ+ + L ++D + +
Sbjct: 9 LQALAERLFEIEGYLHLAEKRQQISELEAESARPNFWDDAEAAQKIMTQLASLRDDVAGI 68
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
K K+ DA +L E+ D +E+ ++ L K L + EL+ + D A
Sbjct: 69 DRAKEKLGDAEAAFELGTEL--GDQASFDESRALAVSLEKDLSELELSSWFTDELDHGDA 126
Query: 131 VISITAGAGGTDAQ 144
+++I G GG ++Q
Sbjct: 127 IVTIKPGQGGLESQ 140
>gi|329116145|ref|ZP_08244862.1| peptide chain release factor 2 [Streptococcus parauberis NCFD 2020]
gi|326906550|gb|EGE53464.1| peptide chain release factor 2 [Streptococcus parauberis NCFD 2020]
Length = 327
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 108/153 (70%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP L +++++V I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 172 HTSFTSVEVMPEL-DDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVV 230
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY
Sbjct: 231 ASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYT 290
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT E + + VMDG ++ FI +YLK++
Sbjct: 291 MVKDHRTSFEVAQVDKVMDGFIDGFIDAYLKWR 323
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
++ FW++ AQ+T Q L ++K K + D + ++ +++ +E DS L EE
Sbjct: 2 SEPDFWNDNIAAQKTSQELNELKVKFDTYHDMQNLSEETELYLEMLDEDDS----LQEEL 57
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +++L++ L +E+T LLS PYD A++ I G+GGT+AQ
Sbjct: 58 EASLEKLDQILSSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQ 100
>gi|225016122|ref|ZP_03705355.1| hypothetical protein CLOSTMETH_00066 [Clostridium methylpentosum
DSM 5476]
gi|224951119|gb|EEG32328.1| hypothetical protein CLOSTMETH_00066 [Clostridium methylpentosum
DSM 5476]
Length = 375
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 104/150 (69%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P + ++S++V+I EDL + R+ G GGQ+VNK E+A+RITH+PTG+
Sbjct: 219 HTSFASLEVIPEV-DDSIEVEIRPEDLRVDTYRSSGAGGQHVNKTESAIRITHLPTGIVT 277
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LK+KL+ I E + +I I+G+ + WG QIR+YVF PY
Sbjct: 278 ACQNERSQMQNRAVAMKMLKSKLIEIKEREHLDKISDIKGEQKEIAWGSQIRSYVFMPYT 337
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKD RTG E +I +VMDG+L+ FI +YL
Sbjct: 338 LVKDHRTGFENGNISAVMDGDLDGFINAYL 367
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 76/140 (54%), Gaps = 2/140 (1%)
Query: 4 FYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDV 63
F + ++ A +++++RA+ + L +E+A+LE AA FWD+ +Q+ LQ T +
Sbjct: 9 FEEYKAELSALKPKIQQLRAALDVDALVQEVAQLEETAAQPGFWDDLDNSQKVLQKTTRL 68
Query: 64 KDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSG 123
K+ I ++ +D T+V+ E D D +E + +K + +D L LLSG
Sbjct: 69 KNTIAEFEKIESLYEDTQTLVEFAFEED--DESCSDEVKANLKSIQDQVDAQRLATLLSG 126
Query: 124 PYDKEGAVISITAGAGGTDA 143
YD A+++ AGAGGT+A
Sbjct: 127 EYDANNAILTFHAGAGGTEA 146
>gi|52082063|ref|YP_080854.1| peptide chain release factor 2 [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|319647929|ref|ZP_08002147.1| peptide chain release factor 2 [Bacillus sp. BT1B_CT2]
gi|404490944|ref|YP_006715050.1| peptide chain release factor 2 [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|423684069|ref|ZP_17658908.1| peptide chain release factor 2 [Bacillus licheniformis WX-02]
gi|52005274|gb|AAU25216.1| peptide chain release factor 2 [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|52349954|gb|AAU42588.1| peptide chain release factor 2 [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|317390270|gb|EFV71079.1| peptide chain release factor 2 [Bacillus sp. BT1B_CT2]
gi|383440843|gb|EID48618.1| peptide chain release factor 2 [Bacillus licheniformis WX-02]
Length = 327
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 107/155 (69%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP EE +D++I ED+++ RA G GGQ+VN ++AVRITH+PTGV V
Sbjct: 174 HTSFVSCDVMPEFNEE-IDIEIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTGVIV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LK+KL E++ +++ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQTERSQIKNRERAMKMLKSKLYQRRIEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKD RT E ++ +VMDG+++ FI +YL+ K S
Sbjct: 293 LVKDHRTNTEMGNVQAVMDGDIDSFIDAYLRSKLS 327
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD FW ++ +AQ + +KD +N ++ L +E D L E
Sbjct: 2 ADPDFWGDQQKAQTIINEANALKDYVNTYKSLSESHEELQMTHDLLKE--DPDQDLQNEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +K L K ++FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 VNELKSLTKQFNEFELQLLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|315037900|ref|YP_004031468.1| peptide chain release factor 2 [Lactobacillus amylovorus GRL 1112]
gi|325956373|ref|YP_004291785.1| peptide chain release factor 2 [Lactobacillus acidophilus 30SC]
gi|385817254|ref|YP_005853644.1| peptide chain release factor 2 [Lactobacillus amylovorus GRL1118]
gi|312276033|gb|ADQ58673.1| peptide chain release factor 2 [Lactobacillus amylovorus GRL 1112]
gi|325332938|gb|ADZ06846.1| peptide chain release factor 2 [Lactobacillus acidophilus 30SC]
gi|327183192|gb|AEA31639.1| peptide chain release factor 2 [Lactobacillus amylovorus GRL1118]
Length = 332
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ EV+P + + P+ DL I R+ G GGQ++NK +
Sbjct: 161 LVRISPFDAAKRRHTSFASVEVIPEIDDSIKIDIDPK-DLRIDVYRSSGAGGQHINKTSS 219
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PTG+ +RSQL N+ A++ L+AKL + EE++ + + ++GD + W
Sbjct: 220 AVRITHLPTGIVTTSQAQRSQLQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGW 279
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
G QIR+YVFHPY LVKD+RTG+ET+D VMDG+L+PFI SYL++
Sbjct: 280 GSQIRSYVFHPYNLVKDLRTGYETADANGVMDGKLQPFIYSYLQW 324
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A FW+++ +AQ+ + +K+K + + +D T V+L E D L +E
Sbjct: 2 AQPDFWNDQEKAQKLISENNVLKEKRDSFLKLQKGYEDESTAVELLRE--EPDPDLQKET 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+ L +EL LLSG YD A++ I GAGGT+A
Sbjct: 60 EEDLATLQDEFHNYELDLLLSGKYDSHNALMEIHPGAGGTEA 101
>gi|169347339|ref|ZP_02866277.1| hypothetical protein CLOSPI_00054 [Clostridium spiroforme DSM 1552]
gi|169293956|gb|EDS76089.1| peptide chain release factor 2 [Clostridium spiroforme DSM 1552]
Length = 367
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 108/151 (71%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP E +++ I EDL+I RA G GGQ++NK ++AVRITHIPT + V
Sbjct: 213 HTSFASVDVMPEFNNE-IEIDIKNEDLKIDTYRASGAGGQHINKTDSAVRITHIPTNIVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C +RSQ+ N+ +A+ LK+KL + E++ASE+K+++G+ + WG QIR+YV HPY
Sbjct: 272 TCQSQRSQIKNREQAMIMLKSKLYQLMLEKQASELKELKGEQKEIAWGSQIRSYVLHPYS 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD R+ +E+S+ +V+DG+L+ FI +YLK
Sbjct: 332 LVKDNRSNYESSNPKAVLDGDLDGFIYAYLK 362
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
+ Y ++ + A +EE S ++ +E+ L + +FWD+ +A+ T L
Sbjct: 2 ELYEIKNGLNKAHLLIEEFYRSIDIESYRREIEGLTIVTEQDNFWDDTNKAKITYDKLNK 61
Query: 63 VK---DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQ 119
+K D+ ++L +D+ +VK +EE++ LE S + + LD+FE
Sbjct: 62 MKKIVDQYDVLATTLNNLDETYELVKSSEEVE-----FLEILESDYLKFQEDLDKFEKMM 116
Query: 120 LLSGPYDKEGAVISITAGAGGTDAQ 144
LLSG +D A++ I GAGGT++Q
Sbjct: 117 LLSGEHDNLNAIVEIHPGAGGTESQ 141
>gi|159462370|ref|XP_001689415.1| peptide chain release factor [Chlamydomonas reinhardtii]
gi|158283403|gb|EDP09153.1| peptide chain release factor [Chlamydomonas reinhardtii]
Length = 263
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 106/155 (68%), Gaps = 2/155 (1%)
Query: 144 QTSFSGAEVMPLL-PEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVT 202
QTSF+G +VMP+L P++ ++ + E+DLEI+ R+GGKGGQNVNKVET VRI H+PTG+
Sbjct: 96 QTSFAGVDVMPVLGPDDLPELDLNEKDLEITTMRSGGKGGQNVNKVETGVRILHVPTGLA 155
Query: 203 VRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAE-WGQQIRNYVFHP 261
V+CT+ERSQ NK AL LKA+LL + E E G +++ +FHP
Sbjct: 156 VKCTQERSQAQNKAIALDLLKARLLANSREPPMEEAGSRMGAVADCNTHAHRVQGCLFHP 215
Query: 262 YKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
YKLVKD RTG ETSD+ +VMDGEL F+ + L+ +
Sbjct: 216 YKLVKDTRTGTETSDVQAVMDGELGGFMAAVLRQR 250
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 115 FELTQLLSGPYDKEGAVISITAGAGGTDA 143
+EL +LL GPYD GA ++I+AGAGG DA
Sbjct: 1 WELRRLLCGPYDDRGARLTISAGAGGVDA 29
>gi|221633612|ref|YP_002522838.1| peptide chain release factor 2, programmed frameshift
[Thermomicrobium roseum DSM 5159]
gi|254790922|sp|B9L0E3.1|RF2_THERP RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|221155396|gb|ACM04523.1| peptide chain release factor 2, programmed frameshift
[Thermomicrobium roseum DSM 5159]
Length = 374
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 104/151 (68%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+PL+ EE DV+I EED+ I RA G GGQ+VNK E+AVRITH+PTG+ V
Sbjct: 210 HTSFALVEVLPLV-EEDDDVEIREEDIRIDTFRASGHGGQHVNKTESAVRITHLPTGIVV 268
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKA+LL + QR E +++G V WG +IR+YV HPY
Sbjct: 269 TCQNERSQIQNRETAMKILKARLLELKIRQRQEEQARLKGKPVVTGWGNRIRSYVLHPYT 328
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+V D RT T +I +V++GE++PFI++YL
Sbjct: 329 MVTDHRTEVSTPNIQAVLEGEIDPFIEAYLH 359
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 4/135 (2%)
Query: 10 DVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINL 69
D+E +R++ I L +++ +LE +AAD W + AQ L+ L+ ++D +
Sbjct: 8 DLEELVERLDRIGVRLCLPSKRQQIEQLEHEAADPDLWQDPQRAQSLLRRLSQLRDLVQE 67
Query: 70 LTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEG 129
+ D + + L + D AG +E+ A+ EL + + Q EL LL+G YD
Sbjct: 68 WETLSQQARDLLELRALASD-DLELAGQVEQEAT---ELAERVRQLELRLLLTGQYDGHD 123
Query: 130 AVISITAGAGGTDAQ 144
A++++ AG GG DAQ
Sbjct: 124 AILAVHAGTGGVDAQ 138
>gi|365959459|ref|YP_004941026.1| peptide chain release factor 2 (RF-2) [Flavobacterium columnare
ATCC 49512]
gi|365736140|gb|AEW85233.1| peptide chain release factor 2 (RF-2) [Flavobacterium columnare
ATCC 49512]
Length = 338
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 107/150 (71%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL+ +++++++I D+EI+ +R+ G GGQNVNKVET V++ H PTG+ +
Sbjct: 182 HTSFASVYVYPLV-DDTIEIEISSADIEITTARSSGAGGQNVNKVETKVQLLHKPTGIQI 240
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C+E RSQ N+ +A+ L+++L I ++R + I +K EWG QIRNYV HPYK
Sbjct: 241 QCSETRSQHDNRERAMQMLRSQLYEIELKKRLEQRADIEASKMKIEWGSQIRNYVMHPYK 300
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
L+KDVRT +ETSD+ VM+G L+ F+K+YL
Sbjct: 301 LIKDVRTQYETSDVDGVMNGNLDSFLKAYL 330
>gi|295426388|ref|ZP_06819038.1| peptide chain release factor RF2 [Lactobacillus amylolyticus DSM
11664]
gi|295063756|gb|EFG54714.1| peptide chain release factor RF2 [Lactobacillus amylolyticus DSM
11664]
Length = 332
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 110/168 (65%), Gaps = 1/168 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ EV+P + + P+ DL I R+ G GGQ++NK +
Sbjct: 161 LVRISPFDSAKRRHTSFASVEVIPEIDDSIKIDIDPK-DLRIDVYRSSGAGGQHINKTSS 219
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PTG+ +RSQL N+ A++ L+AKL + EE++ + + ++GD + W
Sbjct: 220 AVRITHLPTGIVTTSQAQRSQLQNRETAMNELRAKLFHLEEEKKRKQKQALKGDQKEIGW 279
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
G QIR+YVFHPY LVKD+RT +ET+D+ VMDG+L+PFI +YL+++ S
Sbjct: 280 GSQIRSYVFHPYNLVKDLRTNYETADVKGVMDGKLQPFIYAYLQWRLS 327
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ +FW+++ +AQ+ + +K+K + + K + +D T ++L +E D L EE
Sbjct: 2 AEPNFWNDQDQAQKLISETNLLKEKRDSFLELKKEYEDETTALELIKE--EPDKELQEEV 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+ + L A +EL L+SG YD A++ I GAGGT+A
Sbjct: 60 ENNLTHLQSAFHNYELDLLMSGKYDSHNALVEIHPGAGGTEA 101
>gi|162449904|ref|YP_001612271.1| peptide chain release factor 2 [Sorangium cellulosum So ce56]
gi|161160486|emb|CAN91791.1| peptide chain release factor 2 [Sorangium cellulosum So ce56]
Length = 350
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 106/150 (70%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QT+F+ EV P +E +++Q+ E+D+EI+ RAGGKGGQNVNKVETAVR+ HIPTG+ +
Sbjct: 182 QTAFAAVEVTPDSDDE-INIQVNEKDIEITTMRAGGKGGQNVNKVETAVRLRHIPTGLNI 240
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ N+ A+ LKAKL + ++R +E++ +G QIRNYV PY+
Sbjct: 241 VCRAERSQHQNRAMAMKVLKAKLYEMELQKREAEVQAYNAAKSSINFGSQIRNYVLAPYR 300
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRT E +D+ +V+DG+LE FI++YL
Sbjct: 301 LVKDVRTSTEATDVDAVLDGDLEGFIEAYL 330
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Query: 34 LAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDST 93
L +L S FW+++ +AQ L+ V+ K+ + +++D ++L
Sbjct: 2 LQDLTQTTLSSGFWNDQEKAQAVLRKRAQVESKLEVAQRLGREIEDLAEYLELGAA--EG 59
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D G++ +A + + L + EL ++LSGP D+ A++SI GAGGTDA+
Sbjct: 60 DEGVIADADAQADAIAGRLRKVELDRMLSGPADRGNAIVSIHPGAGGTDAK 110
>gi|218961845|ref|YP_001741620.1| Protein chain release factor B [Candidatus Cloacamonas
acidaminovorans]
gi|167730502|emb|CAO81414.1| Protein chain release factor B [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 340
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 103/152 (67%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ V P +E ++++I +DL+I RA G GGQ VN ++AVRITH+PT +TV
Sbjct: 182 QTSFASVFVYPEF-DEDLEIEINPKDLKIDTFRASGAGGQYVNTTDSAVRITHLPTNITV 240
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ KA+S LK++L EEQR E K + + WG QIR+YVFHPY+
Sbjct: 241 TCQNERSQMQNREKAMSILKSRLYQYYEEQREKEKKNLENSKTEIGWGNQIRSYVFHPYQ 300
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
++KD RT +ET ++ VM+G+L FI ++LKY
Sbjct: 301 MIKDHRTNYETGNVDKVMNGDLNDFIYAWLKY 332
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 34 LAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDST 93
+ ELE K FW+++ +A++ + L+ ++D++ L T + T + L +E
Sbjct: 2 IMELEQKMNAPDFWEDQTQAKKISKQLSQLRDELEHLKKLDTVKGELETYLTLLDE--DF 59
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+A LL EA S + + +++ E+ L+ YD A+++I +GAGGT++Q
Sbjct: 60 NAELLAEAVSELPRIQSFIEKAEIECYLNDKYDHNDALLTIHSGAGGTESQ 110
>gi|283769449|ref|ZP_06342347.1| peptide chain release factor 2 [Bulleidia extructa W1219]
gi|283103974|gb|EFC05359.1| peptide chain release factor 2 [Bulleidia extructa W1219]
Length = 346
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 114/167 (68%), Gaps = 7/167 (4%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ E+MP E+ ++++I ++DL++ R+ G GGQ++NK ++
Sbjct: 181 LVRISPFDSNARRHTSFASVEIMPEF-EDDLEIEIEDKDLDVITMRSSGAGGQHINKTDS 239
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLL---VIAEEQRASEIKQIRGDAVK 247
AVR+TH PTG+TV +RSQL N+ L+ LK+KLL + +EQRASEIK G+
Sbjct: 240 AVRMTHKPTGITVFSQSQRSQLQNRETCLNMLKSKLLQLKIREQEQRASEIK---GEVKA 296
Query: 248 AEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
EWG QIR+YVF PY +VKD+RTG+E ++ SVMDG++E FI SYL+
Sbjct: 297 NEWGSQIRSYVFAPYTMVKDLRTGYEVGNVQSVMDGDIEGFIDSYLR 343
>gi|363890707|ref|ZP_09318023.1| peptide chain release factor 2 [Eubacteriaceae bacterium CM5]
gi|361964449|gb|EHL17484.1| peptide chain release factor 2 [Eubacteriaceae bacterium CM5]
Length = 344
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 102/150 (68%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P L ++S+ + I +DL+I R+ G GGQ+VNK E+A+RITHIPTGV V
Sbjct: 191 HTSFASVDVLPEL-DDSIKIDINPKDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGVVV 249
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ +NK A+ L AKL+ + E + +I+ I+G WG QIR+YVF PY
Sbjct: 250 QCQNERSQFSNKDTAMKMLMAKLIELKELEHKDKIEDIQGKYSLIAWGSQIRSYVFQPYT 309
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD RT E +I SVMDG++ PFI +YL
Sbjct: 310 MVKDHRTNFEIGNITSVMDGDIMPFINAYL 339
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
+ E+ + E+ + D FW++R AQ+ L+ ++ K+ +K++D + +L E
Sbjct: 12 QDEILKEEINSQD--FWNDRENAQKILKKSKQIQTKLESYNTASSKLEDLEVLFELATE- 68
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D L EE I ++ + Q L LLSG YD A++S+ +G GG DAQ
Sbjct: 69 ---DENLEEELIKEIDDVQADIKQLSLQVLLSGEYDANNAILSVHSGTGGLDAQ 119
>gi|317057134|ref|YP_004105601.1| peptide chain release factor 2 [Ruminococcus albus 7]
gi|315449403|gb|ADU22967.1| peptide chain release factor 2 [Ruminococcus albus 7]
Length = 378
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/253 (37%), Positives = 145/253 (57%), Gaps = 24/253 (9%)
Query: 61 TDVKDKINLLTDFKTKMDDAVTI-VKLTEEMDSTDAGLLEEAASIIKELNKALDQFE--- 116
T+ +D +L TK D+ K+ + ++ DAG+ ++ S+ E A +
Sbjct: 144 TEAQDWTEMLIRMYTKWADSHGFSAKIMDILEGGDAGI--KSCSMFIEGENAYGYLKSES 201
Query: 117 -LTQLLS-GPYDKEGAVISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 174
+ +L+ P+D G+ TSFS EVMP L +++++V+I ED+E+
Sbjct: 202 GIHRLVRISPFDSSGS------------RHTSFSAVEVMPEL-DDTIEVEIRPEDIEMEV 248
Query: 175 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 234
RA G GGQ++NK +AVR+ H PTG+ C +RSQ NK A+ LKAKL+ I E +
Sbjct: 249 YRASGAGGQHINKTSSAVRLIHKPTGIVTACQTQRSQFQNKDYAMKMLKAKLIEIKEREH 308
Query: 235 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+I+ I+G + WG QIR+YVF PY LVKD+RTG E +++ +VMDG+L+ FI +YLK
Sbjct: 309 LEKIEDIKGVQKEIAWGSQIRSYVFMPYTLVKDLRTGFEYNNVKAVMDGDLDGFINAYLK 368
Query: 295 YKYSMSLSASDAN 307
++SL + N
Sbjct: 369 ---ALSLGKIEKN 378
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 77/140 (55%), Gaps = 1/140 (0%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
NLR ++EA + E+ ++ +++ EL KAA+ FWD+ ++Q LQ +++
Sbjct: 8 NLRSELEACRPMIRELHDVYDIENAAEKIEELHEKAAEPGFWDDPEKSQVVLQQTRNLEG 67
Query: 66 KINLLTDFKTKMDDAVTIVKLT-EEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
K+ F DD ++++ EE + T A L+EE + + +L LD L LL+G
Sbjct: 68 KVERYNKFNGAADDIEVMIEMAAEEDEDTQAELVEEIKAELDKLKADLDAASLETLLTGE 127
Query: 125 YDKEGAVISITAGAGGTDAQ 144
YD A+++ AGAGGT+AQ
Sbjct: 128 YDHSNAILNFHAGAGGTEAQ 147
>gi|325679774|ref|ZP_08159348.1| peptide chain release factor 2 [Ruminococcus albus 8]
gi|324108589|gb|EGC02831.1| peptide chain release factor 2 [Ruminococcus albus 8]
Length = 378
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/253 (36%), Positives = 146/253 (57%), Gaps = 24/253 (9%)
Query: 61 TDVKDKINLLTDFKTKMDDAVTI-VKLTEEMDSTDAGLLEEAASIIKELNKALDQFE--- 116
T+ +D +L TK D+ K+ + ++ DAG+ ++ S+ E A +
Sbjct: 144 TEAQDWTEMLIRMYTKWADSHGFNAKIMDILEGGDAGI--KSCSMFIEGENAYGYLKSES 201
Query: 117 -LTQLLS-GPYDKEGAVISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 174
+ +L+ P+D G+ TSFS EVMP L +++++V+I ED+E+
Sbjct: 202 GIHRLVRISPFDSSGS------------RHTSFSAVEVMPEL-DDNIEVEIRPEDIEMEV 248
Query: 175 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 234
RA G GGQ++NK +AVR+ H PTG+ C +RSQ N+ A+ LKAKL+ I E +
Sbjct: 249 YRASGAGGQHINKTSSAVRLIHKPTGIVTACQTQRSQFQNRDYAMKMLKAKLIEIKEREH 308
Query: 235 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+I+ I+G + WG QIR+YVF PY LVKD+RTG+E +++ +VMDG+L+ FI +YLK
Sbjct: 309 LEKIEDIKGVQKEIAWGSQIRSYVFMPYTLVKDLRTGYEYNNVKAVMDGDLDGFINAYLK 368
Query: 295 YKYSMSLSASDAN 307
++SL + N
Sbjct: 369 ---ALSLGKIEKN 378
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 78/140 (55%), Gaps = 1/140 (0%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
NL+ +++A ++E+ ++ +++ EL KAA+ FWD+ ++Q LQ +++
Sbjct: 8 NLKSELDACRPLIKELHDVYDIENAAEKIEELHEKAAEPGFWDDPEKSQVVLQQTRNLEG 67
Query: 66 KINLLTDFKTKMDDAVTIVKLT-EEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
K+ F DD ++++ EE + T A L+EE + + +L LD L LL+G
Sbjct: 68 KVERYNKFNGAADDIEVMIEMAGEEDEDTQAELVEEIKAELDKLKADLDAASLETLLTGE 127
Query: 125 YDKEGAVISITAGAGGTDAQ 144
YD A+++ AGAGGT+AQ
Sbjct: 128 YDHSNAILNFHAGAGGTEAQ 147
>gi|452973508|gb|EME73330.1| peptide chain release factor 2 [Bacillus sonorensis L12]
Length = 327
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 107/155 (69%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP EE +D++I ED+++ RA G GGQ+VN ++AVRITH+PTGV V
Sbjct: 174 HTSFVSCDVMPEFNEE-IDIEIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTGVIV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LK+KL E++ +++ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQTERSQIKNRERAMKMLKSKLYQRRIEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKD RT E ++ +VMDG+++ FI +YL+ K S
Sbjct: 293 LVKDHRTNTEMGNVQAVMDGDIDSFIDAYLRSKLS 327
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD FW ++ +AQ + +K+ +N + ++ L +E D L E
Sbjct: 2 ADPDFWGDQQKAQTIINEANALKEYVNTYKELSESHEELQMTHDLLKE--DPDEDLQNEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +K L K ++FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 ENELKSLTKKFNEFELQLLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|409122903|ref|ZP_11222298.1| peptide chain release factor 2 [Gillisia sp. CBA3202]
Length = 313
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 105/150 (70%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL+ ++S+++ + ++ R+ G GGQNVNKVETAVR+ H PTG+ +
Sbjct: 156 HTSFASVYVYPLV-DDSIEIDVNPSEISWETMRSSGAGGQNVNKVETAVRLRHAPTGIVI 214
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+E RSQL NK KA+ LK++L I +++ ++ ++I +K EWG QIRNYV HPYK
Sbjct: 215 ENSETRSQLENKTKAMQLLKSQLYEIELQKQQAQRREIEDSKMKIEWGSQIRNYVMHPYK 274
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRT ET ++ +VMDG L+PF+K+YL
Sbjct: 275 LVKDVRTAEETGNVDAVMDGALDPFLKAYL 304
>gi|406983802|gb|EKE04960.1| peptide chain release factor 2 [uncultured bacterium]
Length = 350
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 106/154 (68%), Gaps = 1/154 (0%)
Query: 144 QTSFSGAEVMPLLPEESM-DVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVT 202
QTSF+ EV+P L + D+QI +E+L+ F+RAGG GGQNVNKV TAVR+TH+PTG+
Sbjct: 197 QTSFALVEVLPDLEASDLPDIQIKDEELDWQFTRAGGHGGQNVNKVSTAVRLTHLPTGIV 256
Query: 203 VRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPY 262
+ ER Q N+ AL L+AKL + +E + +K I+G+ A WG QIR+YV HPY
Sbjct: 257 ITARTERFQEQNRKIALGLLRAKLWIRQQEMEKNNLKDIKGEYKPASWGNQIRSYVLHPY 316
Query: 263 KLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
K+VKD+RT E+ + V+DGEL+ FI++ LK K
Sbjct: 317 KMVKDLRTEVESGNPDRVLDGELDEFIEAELKLK 350
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 16/103 (15%)
Query: 41 AADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEE 100
+ D WD++ +A+ LQ L+ +K +++ + D + D + I+ E+++
Sbjct: 38 STDPKLWDDQNKAKAVLQNLSGLKAELDEIKD----VSDTLEILNEVEDVEE-------- 85
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+ +L + + + EL LS +D + +I+I AG GGT+A
Sbjct: 86 ----LNKLGRLIAKLELKSYLSATHDSKNTIITIHAGQGGTEA 124
>gi|333896506|ref|YP_004470380.1| hypothetical protein Thexy_0660 [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333111771|gb|AEF16708.1| hypothetical protein Thexy_0660 [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 365
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 109/155 (70%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P + ++ + V I EDL+I R+ G GGQ+VNK E+A+RITHIPTG+ V
Sbjct: 212 HTSFALVEVLPEI-DDDIKVDIRPEDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGIIV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ+ N+ A+ LKAKL+ + +++ +I+ ++G+ +A WG QIR+YVF PY
Sbjct: 271 QCQTERSQMQNRETAMKMLKAKLMDMMIKEQKEKIEDLKGEHKEAGWGNQIRSYVFQPYT 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKD RT E ++ +VMDGE++ FI +YLK K S
Sbjct: 331 LVKDHRTNFEVGNVNAVMDGEIDDFINAYLKQKVS 365
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 80/129 (62%), Gaps = 2/129 (1%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
D ++E+ AS ++ L++E+AE++ K ++ FW++ + QE + D+K+ I+ +
Sbjct: 14 DTIKEMGASLDIEGLKREVAEIDKKMSEPDFWNDLEKFQELSKKQKDLKEIISEYEALEK 73
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
+ +D T+++L ++ D L +E K L+K ++ ++ LLSGPYDK A++SI
Sbjct: 74 QWEDLHTLIELG--LEEGDESLSQEVHEEYKALSKKINDMKIKTLLSGPYDKNNAILSIH 131
Query: 136 AGAGGTDAQ 144
AGAGGT+AQ
Sbjct: 132 AGAGGTEAQ 140
>gi|81428109|ref|YP_395108.1| peptide chain release factor 2 [Lactobacillus sakei subsp. sakei
23K]
gi|78609750|emb|CAI54796.1| Peptide chain release factor 2 [Lactobacillus sakei subsp. sakei
23K]
Length = 332
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 109/155 (70%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L + S+D+++ EDL + R+ G GGQ++NK +AVR+TH+PTG+ V
Sbjct: 174 HTSFCSVDVMPEL-DGSIDIEVRTEDLRVDVFRSSGAGGQHINKTSSAVRLTHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ A++ LKAKL +E++A + I+G+ ++ WG QIR+YVFHPY
Sbjct: 233 SSQAQRSQLQNRETAMNMLKAKLYQKEQEEQAKKAAAIKGEQLEIGWGSQIRSYVFHPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT +ET + +VMDG+L+PF+ +YL+++ S
Sbjct: 293 MVKDHRTNYETGNGQAVMDGDLDPFMYAYLQWQLS 327
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDD-AVTIVKLTEEMDSTDAGLLEE 100
D FW+++ AQ+ + +K+K + + + ++ +VT+ L EE D E
Sbjct: 2 GDPDFWNDQQSAQQLIDQNNVLKEKYDSFNQLQAQFEELSVTLELLQEEPDDELQASFE- 60
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ ++++ + Q+EL QLLSG YD A++ + GAGGT++Q
Sbjct: 61 --ADLEQIQSQMRQYELGQLLSGEYDSNNAIVELHPGAGGTESQ 102
>gi|336118944|ref|YP_004573716.1| peptide chain release factor 2 [Microlunatus phosphovorus NM-1]
gi|334686728|dbj|BAK36313.1| peptide chain release factor 2 [Microlunatus phosphovorus NM-1]
Length = 368
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 107/155 (69%), Gaps = 2/155 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EV+P+ EE+ + IPE D+ I R+ G GGQ+VN ++AVRITH+PTG+ V
Sbjct: 213 QTSFAGVEVLPVT-EEADHIDIPEADIRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C E+SQL NK AL L+A+LL A R +E+ ++GD + WG Q+R+YV HPY+
Sbjct: 272 SCQNEKSQLQNKAAALRVLQARLLEKARRDREAEMNALKGDGGNS-WGSQMRSYVLHPYQ 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD+RT E S +V DGEL+ FI+S ++++ +
Sbjct: 331 MVKDLRTDFEVSSPDAVFDGELDGFIESGIRWRMT 365
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
Query: 33 ELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDS 92
E+AEL + A WD+ AQ L+ ++ +I+ + D ++++DD +++L E
Sbjct: 32 EIAELSEQVAAPDLWDDVDNAQRITSRLSALQSEIDRVADLRSRLDDLSVLIELATE--E 89
Query: 93 TDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+DA L EA + + L A++ E+ LLSG YD A+++I + AGG DA
Sbjct: 90 SDAASLAEAEAELSSLQHAVESLEVRTLLSGEYDPREALVTIRSEAGGVDA 140
>gi|352685083|ref|YP_004897068.1| peptide chain release factor [Acidaminococcus intestini RyC-MR95]
gi|350279738|gb|AEQ22928.1| peptide chain release factor [Acidaminococcus intestini RyC-MR95]
Length = 366
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 104/151 (68%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP + + +++V I +D+ + + RA G GGQ+VNK +AVR+TH+PTG+ V
Sbjct: 213 HTSFAAVDVMPEI-DNTVEVNINMDDVRVDYYRASGAGGQHVNKTSSAVRMTHLPTGIVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL NK + L L+AKL + + +I + GD EWG QIR+YVF PY
Sbjct: 272 QCQNERSQLQNKERCLQLLRAKLFEYEKAIQDQKISDLAGDYQAIEWGSQIRSYVFQPYT 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RTG ET +I +VMDG+L+ F++SYL+
Sbjct: 332 LVKDHRTGAETGNIQAVMDGDLDLFVESYLR 362
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 77/138 (55%), Gaps = 2/138 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
LR + +R+ E++ ++ ++ + +L+ + A FWD+ +AQ+ Q ++K +
Sbjct: 6 LRPQIGELRNRLGELKTGLKIEPKKERIQDLDYQMAAPGFWDDPDKAQKVAQEANNLKSE 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
++ T +TK+DD T+ ++ M+ D L+ E S ++ L + EL LLS YD
Sbjct: 66 VDTFTSLETKVDDLDTLWEMA--MEEKDDTLVSEMESELEGAKHTLSELELGMLLSDEYD 123
Query: 127 KEGAVISITAGAGGTDAQ 144
A++++ AGAGGT+AQ
Sbjct: 124 ANNAIMNLHAGAGGTEAQ 141
>gi|424845145|ref|ZP_18269756.1| peptide chain release factor 2 [Jonquetella anthropi DSM 22815]
gi|363986583|gb|EHM13413.1| peptide chain release factor 2 [Jonquetella anthropi DSM 22815]
Length = 364
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 104/153 (67%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFSG V P LP++ ++V I +EDL I R+ G GGQ+VN ++AVRITH+PTG+ V
Sbjct: 212 HTSFSGVVVSPQLPDD-VEVAIRDEDLRIDTYRSSGAGGQHVNMTDSAVRITHLPTGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ NK A+ L++KL + + R E+ + G+ ++ WG QIR+YV PY
Sbjct: 271 SCQNERSQHMNKATAMQVLRSKLYDLQVQNRRQELDDLAGEKKESSWGHQIRSYVLQPYT 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RTG ET ++ +V+DG+L+ FI +YL+++
Sbjct: 331 LVKDHRTGEETGNVAAVLDGDLDRFILAYLRWR 363
>gi|399887171|ref|ZP_10773048.1| peptide chain release factor 2 [Clostridium arbusti SL206]
Length = 326
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/152 (51%), Positives = 102/152 (67%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P L E + D+ I +DL I RA G GGQ+VNK E+A+RITHIPTG+ V
Sbjct: 174 QTSFASVEVLPELTE-NQDIDIKSDDLRIDTYRASGAGGQHVNKTESAIRITHIPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ +NK A+ LKAKL+ + E I+ + G+ +G QIR+YVF PY
Sbjct: 233 QCQNERSQHSNKESAMVMLKAKLVELKERAHKERIEDLTGELKDNGFGSQIRSYVFQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
+VKD RTG ET I SVMDG+++ FI YLK+
Sbjct: 293 MVKDHRTGVETGSIDSVMDGDIDNFITEYLKH 324
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ +AQE Q +KD++ L + +++DA ++++ +E + D +L+E S I
Sbjct: 6 FWDDMKKAQEITQKSKGLKDRVELFNALEERLEDAKILIQMCQEEE--DENILDEIVSEI 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L ++D F + LL+G YD+ A++ + GAGGTDAQ
Sbjct: 64 NNLKVSIDTFRVEILLAGQYDRNNAILDLHTGAGGTDAQ 102
>gi|308175261|ref|YP_003921966.1| peptide chain release factor 2 [Bacillus amyloliquefaciens DSM 7]
gi|384161146|ref|YP_005543219.1| peptide chain release factor 2 [Bacillus amyloliquefaciens TA208]
gi|384166040|ref|YP_005547419.1| peptide chain release factor 2 [Bacillus amyloliquefaciens LL3]
gi|384170235|ref|YP_005551613.1| peptide chain release factor 2 [Bacillus amyloliquefaciens XH7]
gi|307608125|emb|CBI44496.1| peptide chain release factor 2 [Bacillus amyloliquefaciens DSM 7]
gi|328555234|gb|AEB25726.1| peptide chain release factor 2 [Bacillus amyloliquefaciens TA208]
gi|328913595|gb|AEB65191.1| peptide chain release factor 2 [Bacillus amyloliquefaciens LL3]
gi|341829514|gb|AEK90765.1| peptide chain release factor 2 [Bacillus amyloliquefaciens XH7]
Length = 327
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 106/155 (68%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP EE +D++I ED+++ RA G GGQ+VN ++AVRITH+PT V V
Sbjct: 174 HTSFVSCEVMPEFNEE-IDIEIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQTERSQIKNRDRAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E ++ +VMDG+++ FI +YL+ K S
Sbjct: 293 MVKDHRTNTEMGNVQAVMDGDIDIFIDAYLRSKLS 327
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FW+++ +AQ + +KD +N ++ +L +E D L +E
Sbjct: 2 AEPEFWNDQQKAQTVINEANGLKDYVNSYHQLSESHEELQMTYELLKE--EPDQELQQEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+K L K L++FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 EKELKSLTKELNEFELQLLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|374594234|ref|ZP_09667239.1| bacterial peptide chain release factor 2 (bRF-2) [Gillisia limnaea
DSM 15749]
gi|373872309|gb|EHQ04306.1| bacterial peptide chain release factor 2 (bRF-2) [Gillisia limnaea
DSM 15749]
Length = 365
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/346 (32%), Positives = 168/346 (48%), Gaps = 69/346 (19%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK----------- 64
DR+ +R + + E++ LE K +FWDN EA+E ++ L K
Sbjct: 12 DRLVALRRYLDVDAKQIEISNLEEKTYSPNFWDNPKEAEELMRGLNSEKKWVDQYLKAET 71
Query: 65 --DKINLLTDF-----------KTKMDDAVTIVK-------LTEEMDSTDAGL------- 97
D + ++ +F + + AV +++ L+EE D A L
Sbjct: 72 LVDDLEIIYEFYKEKEASAEDVDARNEQAVNLIEELEFKNMLSEEGDGLSAVLQITAGAG 131
Query: 98 ------------------LEEAASIIKELNKALDQF----ELTQLLSGPY-----DKEGA 130
E IKELN + +T + G Y E
Sbjct: 132 GTESCDWAEMLMRMYMRWAENRGFSIKELNYQSGEVAGIKTVTLEIEGEYAFGWLKSENG 191
Query: 131 V---ISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNK 187
V + I+ TSF+ V PL+ ++S+++ I D+ R+ G GGQNVNK
Sbjct: 192 VHRLVRISPFDSNAKRHTSFASVYVYPLV-DDSIEIDINPADISWETMRSSGAGGQNVNK 250
Query: 188 VETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVK 247
VETAVR+ H P+G+ V +E RSQL NK KA+ LK++L I +++ ++ ++I +K
Sbjct: 251 VETAVRLRHAPSGIVVENSETRSQLENKTKAMQLLKSQLYEIELQKQQAQRREIEDSKMK 310
Query: 248 AEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
EWG QIRNYV HPYKLVKDVRT ET ++ +VMDG+++ F+K+YL
Sbjct: 311 IEWGSQIRNYVMHPYKLVKDVRTAEETGNVEAVMDGDIDRFLKAYL 356
>gi|312142853|ref|YP_003994299.1| peptide chain release factor 2 [Halanaerobium hydrogeniformans]
gi|311903504|gb|ADQ13945.1| peptide chain release factor 2 [Halanaerobium hydrogeniformans]
Length = 346
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 104/153 (67%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P L +E ++V I E DL I RA G GGQ+VNK ++AVRITH PTGV V
Sbjct: 192 HTSFASVDVLPELDDE-LEVDIDENDLRIETYRASGAGGQHVNKTDSAVRITHQPTGVVV 250
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C +RSQ NK A+ L +KLL + EE +A +I+ +RG+ + WG QIR+YV HPY
Sbjct: 251 QCQSQRSQHKNKNVAMKILSSKLLELKEEAQAEKIEDLRGEHKEIAWGSQIRSYVLHPYN 310
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
++KD RT E ++ V+DG L+ FI+ YLKYK
Sbjct: 311 MIKDHRTDFEEGNVDKVLDGYLDEFIEEYLKYK 343
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Query: 29 QLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTE 88
+LE E A +E + A S FWD++ A+ Q L +K ++ ++++ + K D+ +L
Sbjct: 8 ELESEKAAIEKEMAQSGFWDDKENARHKSQRLDKLKKRLKVISELEEKFDEIEIYQQLAA 67
Query: 89 EMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E L EE +L K LD EL L+ PYD A++SI GAGGT++Q
Sbjct: 68 E---EGENLREELEQSFSQLEKKLDNLELKLRLNEPYDDHNAILSIHPGAGGTESQ 120
>gi|225012847|ref|ZP_03703280.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-2A]
gi|225002969|gb|EEG40946.1| peptide chain release factor 2 [Flavobacteria bacterium MS024-2A]
Length = 314
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 103/150 (68%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL+ ++S+++ I D RA G GGQNVNKVETAVR+ H PTG+ +
Sbjct: 156 HTSFASVYVYPLV-DDSIEIVISPSDYTWETMRASGAGGQNVNKVETAVRLRHHPTGIII 214
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+E RSQL NK KA+ L+++L I +++ S +I K EWG QIRNYV HPYK
Sbjct: 215 ENSETRSQLENKNKAMQLLRSQLYEIELQKKLSARDEIEASKKKIEWGSQIRNYVMHPYK 274
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRT HE +D+ +VM+G+++PF+K+YL
Sbjct: 275 LVKDVRTQHEVTDVDAVMNGQIDPFLKAYL 304
>gi|406671406|ref|ZP_11078645.1| peptide chain release factor 2 [Facklamia hominis CCUG 36813]
gi|405580656|gb|EKB54715.1| peptide chain release factor 2 [Facklamia hominis CCUG 36813]
Length = 344
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 113/165 (68%), Gaps = 1/165 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
+I I+ TSF +V P++ ++S+++ I ++DL I RA G GGQ++NK +
Sbjct: 175 LIRISPFDSNGKRHTSFCSIDVTPMI-DDSIEIHINQDDLRIDTYRASGAGGQHINKTSS 233
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITHIPTG+ + +RSQ+ N+ +A+ L+AKL + + +E+++I+G+ + W
Sbjct: 234 AVRITHIPTGIVTQSQAQRSQIQNREQAMGLLRAKLYQLELADKEAELQKIKGEQKEIAW 293
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
G QIR+YVFHPY++VKD RT E++++ +VMDGE++PFI +YL +
Sbjct: 294 GSQIRSYVFHPYRMVKDHRTNFESANVDAVMDGEIDPFIDAYLNW 338
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
+ Q+E ++A+ + + A FWD++++AQ +Q + D + N + +D V+L
Sbjct: 1 MDQMESDIAQCQDRMAQPGFWDDQSQAQSIIQEMNDKESTRNAFLKLVSDWEDLQVEVEL 60
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EE + D L EE + + L ++L+ LLS +D A++ I GAGG ++Q
Sbjct: 61 YEE--TLDRPLWEEIEKNCYKFEQNLKAYQLSLLLSEEHDHCNAILEIHPGAGGKESQ 116
>gi|365903499|ref|ZP_09441322.1| protein chain release factor B [Lactobacillus malefermentans KCTC
3548]
Length = 332
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 105/153 (68%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P L ++S+D++I DL + RA G GGQ+VNK +AVRITH PTG+ V
Sbjct: 174 HTSFASVDVLPEL-DDSVDIEINPADLRVDVYRASGAGGQHVNKTSSAVRITHEPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ A++ LKAKL + E ++A E + G + WG QIR+YVFHPY
Sbjct: 233 ASQAQRSQLQNRQTAMNMLKAKLYELEESKKAKEKAALEGVQLDIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT ET+++ VMDG+L+PFI +YL+++
Sbjct: 293 MVKDHRTNQETANVQGVMDGDLDPFIDAYLQFQ 325
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD++ AQ + D+K K + T +DD +++L MD D + E +
Sbjct: 6 FWDDQRSAQGLIDETNDLKKKFDDFHKLTTDLDDVNVLLELL--MDDPDDEMWTEFEEKL 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+L + L + L QLL+G YDK A++ I GAGGT++Q
Sbjct: 64 AKLQENLQAYRLAQLLNGQYDKNNAILEIHPGAGGTESQ 102
>gi|399923642|ref|ZP_10781000.1| hypothetical protein Prhi1_00305 [Peptoniphilus rhinitidis 1-13]
Length = 371
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS +V P L +++ DV+I EE+L+I R+ G GGQ+VN ++AVRITHIPTG+ V
Sbjct: 215 HTSFSSVDVFPELDDDT-DVEIKEEELKIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVV 273
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ+ N+ KA++ LKAKL+ +AEE++ +I+ ++G+ + WG QIR+YVF PY
Sbjct: 274 QCQNERSQIQNREKAMNMLKAKLIALAEEEKKEKIEDLQGNYSQIAWGSQIRSYVFQPYT 333
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT + D+ VMDG+L+ FI +YL+ K
Sbjct: 334 MVKDHRTNIDVGDVEKVMDGDLDVFINAYLQDK 366
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Query: 2 QDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALT 61
Q+ Y ++ +E + + + S + L+ ++ EL K + FWD+ AQ+ +
Sbjct: 3 QNIYLDKERLENSKNTTLALGDSLEISSLKDKVVELNKKQMEPGFWDDNDSAQKIINETN 62
Query: 62 DVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLL 121
+ KI+ + + DA +++L E + D ++ ++++E+ K +F+L LL
Sbjct: 63 SYQKKIDQYDELNKLITDAEDLIELMEIEE--DYSSYDDFRNLVEEIEKKTTEFKLNTLL 120
Query: 122 SGPYDKEGAVISITAGAGGTDAQ 144
+G YD A++SI AGAGGT+AQ
Sbjct: 121 NGEYDSHNAILSIHAGAGGTEAQ 143
>gi|257893004|ref|ZP_05672657.1| peptide chain release factor 2 [Enterococcus faecium 1,231,408]
gi|257829383|gb|EEV55990.1| peptide chain release factor 2 [Enterococcus faecium 1,231,408]
Length = 338
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 104/151 (68%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L +E++D++I +DL+I RA G GGQ++NK E+AVRITH+PTG V
Sbjct: 185 HTSFCSVDVMPEL-DETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTGTVV 243
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+ LKAKL + E++ E +RG+ + WG QIR+YVFHPY
Sbjct: 244 ASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVFHPYS 303
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDG+L+ FI YLK
Sbjct: 304 MVKDHRTNVETGNVQAVMDGDLDLFIDGYLK 334
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 67/115 (58%), Gaps = 2/115 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++AE E K A+ FWD+ AQ+ + K+ + ++++ +V++ +E
Sbjct: 1 MEEDIAEAEAKMAEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVEMLQE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
DA + EEA + I L++ + +EL+ LL GPYD+ A++ + GAGGT++Q
Sbjct: 61 --EPDAAMQEEAETRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQ 113
>gi|312868547|ref|ZP_07728744.1| peptide chain release factor 2 [Lactobacillus oris PB013-T2-3]
gi|417886530|ref|ZP_12530674.1| peptide chain release factor 2 [Lactobacillus oris F0423]
gi|311095918|gb|EFQ54165.1| peptide chain release factor 2 [Lactobacillus oris PB013-T2-3]
gi|341592921|gb|EGS35778.1| peptide chain release factor 2 [Lactobacillus oris F0423]
Length = 332
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++S++V I DL + R+ G GGQ++NK E+AVRITH+PTG+
Sbjct: 174 HTSFASVDVMPEL-DDSVEVDINPADLRVDTFRSSGAGGQHINKTESAVRITHLPTGLVA 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQL N+ A++ LK+KL + EE++A E +I G+ ++ WG QIR+YVFHPY
Sbjct: 233 SSQAERSQLLNRQTAMNMLKSKLYELEEEKKAKERAEIEGEQLEIGWGSQIRSYVFHPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKD R+GHET + +VMDG+L+PFI +YL++K S
Sbjct: 293 LVKDNRSGHETHNGQAVMDGDLDPFINAYLQWKLS 327
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A FW++ AQ+ + D+K K + + ++ A L D L +E
Sbjct: 2 AQPDFWNDNERAQKLINDNNDLKAKRDTYVALRDQL--ADLETNLELLELEPDPELEKEF 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
A+ + +AL Q+ L QLLS YD + A++ I GAGGT+AQ
Sbjct: 60 ATSFAQTEEALQQYRLNQLLSEKYDSKNAILEIHPGAGGTEAQ 102
>gi|427396509|ref|ZP_18889268.1| peptide chain release factor 2 [Enterococcus durans FB129-CNAB-4]
gi|425723179|gb|EKU86070.1| peptide chain release factor 2 [Enterococcus durans FB129-CNAB-4]
Length = 327
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 104/151 (68%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L +E++D++I +DL+I RA G GGQ++NK E+AVRITH+PTG V
Sbjct: 174 HTSFCSVDVMPEL-DETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+ LKAKL + E++ E +RG+ + WG QIR+YVFHPY
Sbjct: 233 ASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDG+L+ FI YLK
Sbjct: 293 MVKDHRTNVETGNVQAVMDGDLDLFIDGYLK 323
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FWD+ AQ+ + K+ + ++++ +V++ +E DA + EEA
Sbjct: 2 AEPDFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVEMLQE--EPDAAMQEEA 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ I L++ + +EL+ LL GPYD+ A++ + GAGGT++Q
Sbjct: 60 ETRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQ 102
>gi|196231602|ref|ZP_03130460.1| peptide chain release factor 2 [Chthoniobacter flavus Ellin428]
gi|196224455|gb|EDY18967.1| peptide chain release factor 2 [Chthoniobacter flavus Ellin428]
Length = 350
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 105/151 (69%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+G +V+P LPE S ++I E D+E+ R+GGKGGQNVNKVETAVRI HIPTG+
Sbjct: 174 HTSFAGVDVVPELPE-SAPIEINEADIEVDTYRSGGKGGQNVNKVETAVRIRHIPTGIVA 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ NK+ A+ L+AKL I ++ A+E G+ +G QIR+YVF PY+
Sbjct: 233 ACQNERSQQKNKVTAMRMLQAKLQQIEVDKMAAETAAAYGEKADVSFGSQIRSYVFQPYQ 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
V D+RTG +TS+I +VMDG+++ FI+ L+
Sbjct: 293 KVLDLRTGVDTSNISAVMDGDIDAFIQGKLR 323
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 60/103 (58%), Gaps = 4/103 (3%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM-DSTDAGLLEE 100
A+ FW N+ AQ+ ++ ++ +++KI L +++D +++L E D T +E+
Sbjct: 2 AEPDFWANKERAQKNVEEVSTLRNKIGPLLTLDRQIEDLPVLIELAREANDETSVKEVEK 61
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+I+ L +FEL LL+GP D+ A ++I +GAGGT++
Sbjct: 62 EYGVIQ---NGLAEFELKMLLNGPNDRYNAFLTINSGAGGTES 101
>gi|310644311|ref|YP_003949070.1| protein chain release factor b [Paenibacillus polymyxa SC2]
gi|309249262|gb|ADO58829.1| Protein chain release factor B-like protein [Paenibacillus polymyxa
SC2]
Length = 339
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +V+P + ++ +D++I EDL+I RA G GGQ++N ++AVRITH+PTG+ V
Sbjct: 182 HTSFVSCDVVPEIADD-VDIEIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGIVV 240
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A++ L++KL E++ ++ +IRG+ WG QIR+YVFHPY
Sbjct: 241 TCQNERSQIKNRERAMTMLRSKLYERKIEEQQQQLDEIRGEQSDIAWGSQIRSYVFHPYS 300
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDG+L+PFI YL+
Sbjct: 301 MVKDHRTSVETGNVGAVMDGDLDPFIDGYLR 331
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 34 LAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDST 93
+A E K A FWD+ +AQ + + VK ++ + + +DA +V+L EE
Sbjct: 2 IANFEEKMAAPDFWDDNEKAQGVIAEMNVVKSSVDSYEQLRQEYEDAGMMVELAEE--EG 59
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D L+ E + IK L L++FEL LL+ PYDK A++ + GAGGT++Q
Sbjct: 60 DEALVGEVENSIKSLLSKLEEFELQLLLNQPYDKLNAILELHPGAGGTESQ 110
>gi|284989796|ref|YP_003408350.1| peptide chain release factor 2 [Geodermatophilus obscurus DSM
43160]
gi|284063041|gb|ADB73979.1| peptide chain release factor 2 [Geodermatophilus obscurus DSM
43160]
Length = 370
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 117/173 (67%), Gaps = 15/173 (8%)
Query: 124 PYDKEGAVISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQ 183
P+D +G QTSF+G EV+P++ E++ V IPE ++ I R+ G GGQ
Sbjct: 204 PFDNQGR------------RQTSFAGVEVLPVV-EQTDHVDIPENEIRIDVFRSSGPGGQ 250
Query: 184 NVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRG 243
+VN ++AVRITH+PTG+ V C E+SQ+ N+ A+ L+A+LL +E++ +E+ +RG
Sbjct: 251 SVNTTDSAVRITHLPTGIVVSCQNEKSQIQNRAAAMRVLQARLLARRQEEQRAEMDALRG 310
Query: 244 DAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+ + WG Q+R+YV HPY++VKD+RT ET + +V+DG+++PFI++ ++++
Sbjct: 311 EG--SSWGNQMRSYVLHPYQMVKDLRTEQETGNTSAVLDGDIDPFIEAGIRWR 361
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 6/125 (4%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
I A + +L +E+AELE +A+ W++ AQ L+ ++ + + + ++++DD
Sbjct: 19 IEAVLDVDRLRREVAELEQQASAPDLWNDVEAAQALTSKLSYLQGDLRRVEELRSRLDD- 77
Query: 81 VTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGA 138
V L EM + +D EA + L +A+D+ E+ LLSG YD A+++I + A
Sbjct: 78 ---VGLLHEMAVEESDEATAAEAERELASLRQAIDELEVRTLLSGEYDSREALVTIRSEA 134
Query: 139 GGTDA 143
GG DA
Sbjct: 135 GGVDA 139
>gi|313884513|ref|ZP_07818274.1| peptide chain release factor 2 [Eremococcus coleocola
ACS-139-V-Col8]
gi|312620297|gb|EFR31725.1| peptide chain release factor 2 [Eremococcus coleocola
ACS-139-V-Col8]
Length = 341
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 108/153 (70%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV P + ++S++++I +D+ + RA G GGQ++NK +AVRITHIPTG+
Sbjct: 185 HTSFASIEVTPEM-DDSIEIEINPDDIRVDTYRASGAGGQHINKTSSAVRITHIPTGIVT 243
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ +RSQ N+ +A++ LKAKL EE+RA E+ I+G ++ WG QIR+YVFHPY
Sbjct: 244 QSQAQRSQFQNRDQAMAMLKAKLYQREEEERAKEMAAIKGQQLEIGWGSQIRSYVFHPYS 303
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RTG+E + +V+DG+L+ F+ +YLK++
Sbjct: 304 MVKDHRTGYEVGNSQAVIDGDLDGFMDAYLKWQ 336
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 68/115 (59%), Gaps = 2/115 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A+ E + FWD+ +AQ+ + L + K + D +++DD ++L EE
Sbjct: 1 MEEDIADYEHQMLAPDFWDDNDKAQKVISQLNEAKASYQTIQDLVSQVDDLGMALELYEE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S D +L EA I+ +KAL+ +EL LLSGP+D A++ I GAGGT++Q
Sbjct: 61 --SQDLDMLSEAEDIMTVTSKALNNYELQLLLSGPHDSANAILEIHPGAGGTESQ 113
>gi|260655334|ref|ZP_05860822.1| peptide chain release factor 2 [Jonquetella anthropi E3_33 E1]
gi|260629782|gb|EEX47976.1| peptide chain release factor 2 [Jonquetella anthropi E3_33 E1]
Length = 348
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 104/153 (67%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFSG V P LP++ ++V I +EDL I R+ G GGQ+VN ++AVRITH+PTG+ V
Sbjct: 196 HTSFSGVVVSPQLPDD-VEVAIRDEDLRIDTYRSSGAGGQHVNMTDSAVRITHLPTGIVV 254
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ NK A+ L++KL + + R E+ + G+ ++ WG QIR+YV PY
Sbjct: 255 SCQNERSQHMNKATAMQVLRSKLYDLQVQNRRQELDDLAGEKKESSWGHQIRSYVLQPYT 314
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RTG ET ++ +V+DG+L+ FI +YL+++
Sbjct: 315 LVKDHRTGEETGNVAAVLDGDLDRFILAYLRWR 347
>gi|392304997|emb|CCI71360.1| peptide chain release factor 2 [Paenibacillus polymyxa M1]
Length = 331
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +V+P + ++ +D++I EDL+I RA G GGQ++N ++AVRITH+PTG+ V
Sbjct: 174 HTSFVSCDVVPEIADD-VDIEIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A++ L++KL E++ ++ +IRG+ WG QIR+YVFHPY
Sbjct: 233 TCQNERSQIKNRERAMTMLRSKLYERKIEEQQQQLDEIRGEQSDIAWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDG+L+PFI YL+
Sbjct: 293 MVKDHRTSVETGNVGAVMDGDLDPFIDGYLR 323
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M A D FWD+ +AQ + + VK ++ + + +DA +V+L EE D L+
Sbjct: 1 MAAPD--FWDDNEKAQGVIAEMNAVKSSVDSYEQLRQEYEDAGMMVELAEE--EGDEALV 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E + IK L L++FEL LL+ PYDK A++ + GAGGT++Q
Sbjct: 57 GEVENSIKSLLSKLEEFELQLLLNQPYDKLNAILELHPGAGGTESQ 102
>gi|296127692|ref|YP_003634944.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296019508|gb|ADG72745.1| hypothetical protein Bmur_2678 [Brachyspira murdochii DSM 12563]
Length = 367
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 106/164 (64%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF VMP + +E ++V+I DL + RA G GGQ+VNK +
Sbjct: 200 LVRISPFDANAKRHTSFVAVSVMPDI-DEDIEVEINPSDLRVDTYRASGAGGQHVNKTSS 258
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
A+RITHIPT + V+C ERSQ NK A+ LKAKL + +++ E ++I G+ W
Sbjct: 259 AIRITHIPTNIVVQCQAERSQHNNKDMAMKMLKAKLYQLEKDKLDKEKQKIAGEKTDIAW 318
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIR+YVF PY++VKD+RTGHET ++ SVMDG ++ FI +YLK
Sbjct: 319 GNQIRSYVFQPYQMVKDLRTGHETGNMNSVMDGNIDEFISAYLK 362
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
++ V ++ E +R + K + E++ +A FW++ +AQ+ ++ + DK
Sbjct: 6 IKNTVSNIKEQSEILRGYLDPDSIYKRVKEIDEISAKDDFWNDNIKAQKLMKERMLLLDK 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
I + + ++ +V++ ++S D + +E EL + D+ E L SG +D
Sbjct: 66 IEPVENLIKNSNNIYELVEMA--IESNDIEMEKELEGECIELQRVFDELETKNLFSGEFD 123
Query: 127 KEGAVISITAGAGGTDA 143
+ A +++ AGAGGT++
Sbjct: 124 SKNAYLTLNAGAGGTES 140
>gi|150021425|ref|YP_001306779.1| peptide chain release factor 2 [Thermosipho melanesiensis BI429]
gi|166225118|sp|A6LN93.1|RF2_THEM4 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|149793946|gb|ABR31394.1| peptide chain release factor 2 [Thermosipho melanesiensis BI429]
Length = 369
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ VMP + E+ +DV+I EDL I RA G GGQ VNK E+
Sbjct: 198 LVRISPFDANKRRHTSFASVNVMPEI-EDDIDVEINPEDLRIDTYRASGAGGQYVNKTES 256
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITHIPTG+ V C ERSQL NK A+ LKA+L + E+R ++++I+G+ W
Sbjct: 257 AVRITHIPTGIVVTCQTERSQLQNKETAMKVLKARLYQLELEKRQKQLEEIQGELKDISW 316
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
G QIR+YVF PY +VKD RT ET +I +VMDG+++ FI+S L +
Sbjct: 317 GNQIRSYVFQPYTMVKDHRTNVETGNIDAVMDGDIDIFIESELIF 361
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 6/163 (3%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
Y L++ ++ R E+I + +KEL ELE +S FW+++ A+E Q ++
Sbjct: 4 YELKQRIDEVKKRYEDIVKVFHPEDKKKELEELEKLMGESDFWNDQKRAKEISQNAQRIR 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
I+ + D + K+ ++ E+ DA L+ +I ++ + + FEL +L+
Sbjct: 64 KIIDDMVDIENKL----EDLEAGLELLEEDATFLDTIKQLIDDIERKVKTFELELILNEK 119
Query: 125 YDKEGAVISITAGAGGTDAQ--TSFSGAEVMPLLPEESMDVQI 165
+D A +SI GAGGT++Q S M DVQI
Sbjct: 120 FDSSNAYLSIHPGAGGTESQDWASMLLRMYMRWAERRGFDVQI 162
>gi|431752329|ref|ZP_19541012.1| peptide chain release factor 2 [Enterococcus faecium E2620]
gi|430613820|gb|ELB50819.1| peptide chain release factor 2 [Enterococcus faecium E2620]
Length = 327
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 104/151 (68%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L +E++D++I +DL+I RA G GGQ++NK E+AVRITH+PTG V
Sbjct: 174 HTSFCSVDVMPEL-DETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+ LKAKL + E++ E +RG+ + WG QIR+YVFHPY
Sbjct: 233 ASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDG+L+ FI YLK
Sbjct: 293 MVKDHRTNVETGNVQAVMDGDLDLFIDGYLK 323
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FWD+ AQ+ + K+ + ++++ +V++ +E DA + EEA
Sbjct: 2 AEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVEMLQE--EPDAVMQEEA 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ I L++ ++ +EL+ LL GPYD+ A++ + GAGGT++Q
Sbjct: 60 EARINALDEKMNTYELSMLLDGPYDRNNAIVELHPGAGGTESQ 102
>gi|424762478|ref|ZP_18189987.1| peptide chain release factor 2 [Enterococcus faecalis TX1337RF]
gi|402424703|gb|EJV56871.1| peptide chain release factor 2 [Enterococcus faecium TX1337RF]
Length = 327
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 104/151 (68%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L +E++D++I +DL+I RA G GGQ++NK E+AVRITH+PTG V
Sbjct: 174 HTSFCSVDVMPEL-DETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+ LKAKL + E++ E +RG+ + WG QIR+YVFHPY
Sbjct: 233 ASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDG+L+ FI YLK
Sbjct: 293 MVKDHRTNVETGNVQAVMDGDLDLFIDGYLK 323
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FWD+ AQ+ + K+ + ++++ +V++ +E DA + EEA
Sbjct: 2 AEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVEMLQE--EPDAAMQEEA 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ I L++ L +EL+ LL GPYD+ A++ + GAGGT++Q
Sbjct: 60 ETRINALDEKLKTYELSMLLDGPYDRNNAIVELHPGAGGTESQ 102
>gi|385800795|ref|YP_005837199.1| peptide chain release factor 2 (bRF-2) [Halanaerobium praevalens
DSM 2228]
gi|309390159|gb|ADO78039.1| bacterial peptide chain release factor 2 (bRF-2) [Halanaerobium
praevalens DSM 2228]
Length = 365
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 105/153 (68%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP + + ++V+I E +L+I RA G GGQ+VNK ++AVRITH PTGV V
Sbjct: 211 HTSFASVDVMPEI-DSDLEVEIDENNLKIDTYRASGAGGQHVNKTDSAVRITHQPTGVVV 269
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C +RSQ NK A+ L +KLL + E +A +I ++ G+ + WG QIR+YVFHPY
Sbjct: 270 QCQNQRSQHKNKETAMKILSSKLLELKREAQAEKIDELGGEHKEIAWGSQIRSYVFHPYS 329
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
++KD RT E ++ VMDG L+ FI+SYLKYK
Sbjct: 330 MIKDHRTDFEEGNVDKVMDGYLDEFIESYLKYK 362
>gi|291517989|emb|CBK73210.1| bacterial peptide chain release factor 2 (bRF-2) [Butyrivibrio
fibrisolvens 16/4]
Length = 338
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 112/162 (69%), Gaps = 4/162 (2%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ +VMP + EE +DV+I +ED+ I R+ G GGQ++NK +A+RITH PTG+ V
Sbjct: 174 QTSFASCDVMPDI-EEDVDVEIRDEDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ NK KA+ LK KLL++ +E+ A++ IRG+ + WG QIR+YV PY
Sbjct: 233 TCQNERSQFQNKDKAMQMLKTKLLLLKQEENAAKASGIRGEVSEIGWGNQIRSYVLQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASD 305
+VKD+RTG E+ + +V+DG+L PF+ +YLK+ +SL D
Sbjct: 293 MVKDLRTGEESGNADAVLDGKLTPFMNAYLKW---LSLGCPD 331
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDK---INLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
M+A D FW + + ++ L +KD I+ L D +++D + + E D
Sbjct: 1 MEAPD--FWTDAQVSTAKMKELKSMKDDVAVIDKLEDLYKEIEDYIELGNEEE-----DQ 53
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+++ A +I+E L+ + LLSG YD + A++++ +GAGG +A
Sbjct: 54 EIVDTVALLIEEFENDLESLRMKTLLSGEYDSDSAIVTLHSGAGGVEA 101
>gi|182419781|ref|ZP_02951021.1| peptide chain release factor 2 [Clostridium butyricum 5521]
gi|237666525|ref|ZP_04526510.1| peptide chain release factor 2 [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182376329|gb|EDT73911.1| peptide chain release factor 2 [Clostridium butyricum 5521]
gi|237657724|gb|EEP55279.1| peptide chain release factor 2 [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 347
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 109/164 (66%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ QTSF+ EV+P L +E D+ I +DL++ R+ G GGQ++NK ++
Sbjct: 182 LVRISPYNANGKRQTSFASMEVLPELTKEQ-DITIRPDDLKVDTYRSSGSGGQHINKTDS 240
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITHIPTG+ V+C ERSQ +N+ A+ LK+KL+ + E +I+ + G+ W
Sbjct: 241 AVRITHIPTGIVVQCQNERSQFSNRETAMEMLKSKLVELKERAHKEKIEDLTGELKDMGW 300
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIR+YVFHPY +VKD RT ETS++ VMDG+++ FI ++LK
Sbjct: 301 GSQIRSYVFHPYSMVKDHRTNVETSNVNGVMDGDIDLFINAFLK 344
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
LEKEL ELE K + FWD+ +A+E + +KDKI K+++DD + + EE
Sbjct: 12 LEKELHELECKMQEPGFWDDSKKAEEVTKKSKLIKDKIENYDKLKSQLDDIDVLKDIMEE 71
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D A E IK + ++ + + LLSG YDK A++++ G GGTDA
Sbjct: 72 DDIESAN---EIIQTIKSIEHEIEDYNMKILLSGEYDKNNAIVTLHVGVGGTDAN 123
>gi|430822862|ref|ZP_19441437.1| peptide chain release factor 2 [Enterococcus faecium E0120]
gi|430865541|ref|ZP_19481176.1| peptide chain release factor 2 [Enterococcus faecium E1574]
gi|430442791|gb|ELA52812.1| peptide chain release factor 2 [Enterococcus faecium E0120]
gi|430552888|gb|ELA92605.1| peptide chain release factor 2 [Enterococcus faecium E1574]
Length = 327
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 104/151 (68%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L +E++D++I +DL+I RA G GGQ++NK E+AVRITH+PTG V
Sbjct: 174 HTSFCSVDVMPEL-DETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+ LKAKL + E++ E +RG+ + WG QIR+YVFHPY
Sbjct: 233 ASQTQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDG+L+ FI YLK
Sbjct: 293 MVKDHRTNVETGNVQAVMDGDLDLFIDGYLK 323
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FWD+ AQ+ + K+ + ++++ +V++ +E DA + EEA
Sbjct: 2 AEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVEMLQE--EPDAAMQEEA 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ I L++ + +EL+ LL GPYD+ A++ + GAGGT++Q
Sbjct: 60 ETRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQ 102
>gi|390457185|ref|ZP_10242713.1| peptide chain release factor 2 [Paenibacillus peoriae KCTC 3763]
Length = 331
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 105/151 (69%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +V+P + ++ +D++I EDL+I RA G GGQ++N ++AVRITH+PTG+ V
Sbjct: 174 HTSFVSCDVVPEIADD-VDIEIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A++ L++KL E++ + +IRG+ WG QIR+YVFHPY
Sbjct: 233 TCQNERSQIKNRERAMTMLRSKLYERKIEEQRQHLDEIRGEQSDIAWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDG+L+PFI YL+
Sbjct: 293 MVKDHRTSVETGNVGAVMDGDLDPFIDGYLR 323
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M A D FWD+ +AQ+ + + VK ++ + + +DA + +L +E D L+
Sbjct: 1 MAAPD--FWDDNEKAQDVIAEMNAVKSSVDSYEQLRQEYEDAGMMAELADE--EGDETLV 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E + ++ L L +FEL LL+ PYDK A++ + GAGGT++Q
Sbjct: 57 GEIENSVRSLLSKLQEFELQLLLNQPYDKLNAILELHPGAGGTESQ 102
>gi|408790270|ref|ZP_11201899.1| Peptide chain release factor 2 [Lactobacillus florum 2F]
gi|408520492|gb|EKK20538.1| Peptide chain release factor 2 [Lactobacillus florum 2F]
Length = 355
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 106/153 (69%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P L +E++ V I +DL + R+ G GGQ++NK +AVRITH+PTG+
Sbjct: 197 HTSFASVDVLPEL-DETVQVTINPDDLRVDVFRSSGAGGQHINKTSSAVRITHLPTGIVT 255
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N++ A++ LK+KL + E++A E Q+ G ++ WG QIR+YVFHPY
Sbjct: 256 SSQAQRSQLQNRVTAMNMLKSKLYELELEKQAQEKAQLEGKQLEIGWGSQIRSYVFHPYT 315
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RT +ET++ +VMDG+L PFI +YL++
Sbjct: 316 LVKDHRTNYETANGKAVMDGDLNPFITAYLQWN 348
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L QL++ +A E K A FW+N +AQ + K++ N L + +++
Sbjct: 10 LDQLQENIAINEAKMATPDFWENPTQAQALIAVTNHDKERYNQLQSLAENLHSLQDTLEV 69
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
E+ DA L E + +A+DQ+ L+ LL+G YD A++ I +GAGGT+A
Sbjct: 70 LAEL--PDAELEAEFNKELATEQEAVDQYRLSLLLNGKYDANNAIVEINSGAGGTEA 124
>gi|406967614|gb|EKD92649.1| protein chain release factor B [uncultured bacterium]
Length = 374
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 108/154 (70%), Gaps = 5/154 (3%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
+TSF EV+P + E+ ++QI +EDL+I RAGG GGQ VN ++AVRITH+PTG+ V
Sbjct: 217 ETSFCRVEVVPEI--EANELQIKDEDLKIDVFRAGGHGGQGVNTTDSAVRITHLPTGIVV 274
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL NK A+ L +KL+VI E+ R E+K I+G+ V+ WG QIR+YV HPY+
Sbjct: 275 QCQNERSQLQNKELAMKSLTSKLVVIQEKNRLKELKDIKGEHVEGAWGTQIRSYVLHPYQ 334
Query: 264 LVKDVRTGHETSDIVSVMDGE---LEPFIKSYLK 294
+VKD RT ETS + +V+ G+ L+ FI+ LK
Sbjct: 335 MVKDHRTKKETSQVDAVLAGDPEALDGFIEESLK 368
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 8/121 (6%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L +LE+++ LE + FWDN +AQ + + K+ KT + D + L
Sbjct: 30 LPELEQKIKNLEEEMQAPGFWDNAQKAQHIAREQGILDRKVTAWKRLKTDLIDGQELATL 89
Query: 87 TEEMDSTDAGLLEEAASIIKE---LNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
E + D EAA + K+ L K E+ LSG YD A++S+ A AGGTDA
Sbjct: 90 INEEEHPD-----EAAELKKQVEGLEKTYQDLEIQLYLSGKYDASPAMLSLHASAGGTDA 144
Query: 144 Q 144
Q
Sbjct: 145 Q 145
>gi|227552028|ref|ZP_03982077.1| peptide chain release factor 2 [Enterococcus faecium TX1330]
gi|257879881|ref|ZP_05659534.1| peptide chain release factor 2 [Enterococcus faecium 1,230,933]
gi|257882725|ref|ZP_05662378.1| peptide chain release factor 2 [Enterococcus faecium 1,231,502]
gi|257884039|ref|ZP_05663692.1| peptide chain release factor 2 [Enterococcus faecium 1,231,501]
gi|257890396|ref|ZP_05670049.1| peptide chain release factor 2 [Enterococcus faecium 1,231,410]
gi|257895380|ref|ZP_05675033.1| peptide chain release factor 2 [Enterococcus faecium Com12]
gi|257897991|ref|ZP_05677644.1| peptide chain release factor 2 [Enterococcus faecium Com15]
gi|260559609|ref|ZP_05831789.1| peptide chain release factor 2 [Enterococcus faecium C68]
gi|261208674|ref|ZP_05923111.1| peptide chain release factor 2 [Enterococcus faecium TC 6]
gi|289566068|ref|ZP_06446505.1| peptide chain release factor 2 [Enterococcus faecium D344SRF]
gi|293378249|ref|ZP_06624418.1| peptide chain release factor 2 [Enterococcus faecium PC4.1]
gi|293556398|ref|ZP_06674979.1| peptide chain release factor 2 [Enterococcus faecium E1039]
gi|293560376|ref|ZP_06676869.1| peptide chain release factor 2 [Enterococcus faecium E1162]
gi|293568705|ref|ZP_06680020.1| peptide chain release factor 2 [Enterococcus faecium E1071]
gi|293572408|ref|ZP_06683388.1| peptide chain release factor 2 [Enterococcus faecium E980]
gi|294616268|ref|ZP_06696061.1| peptide chain release factor 2 [Enterococcus faecium E1636]
gi|294617600|ref|ZP_06697230.1| peptide chain release factor 2 [Enterococcus faecium E1679]
gi|294622340|ref|ZP_06701373.1| peptide chain release factor 2 [Enterococcus faecium U0317]
gi|314939593|ref|ZP_07846820.1| peptide chain release factor 2 [Enterococcus faecium TX0133a04]
gi|314941219|ref|ZP_07848115.1| peptide chain release factor 2 [Enterococcus faecium TX0133C]
gi|314948616|ref|ZP_07851991.1| peptide chain release factor 2 [Enterococcus faecium TX0082]
gi|314953358|ref|ZP_07856285.1| peptide chain release factor 2 [Enterococcus faecium TX0133A]
gi|314993437|ref|ZP_07858802.1| peptide chain release factor 2 [Enterococcus faecium TX0133B]
gi|314995786|ref|ZP_07860875.1| peptide chain release factor 2 [Enterococcus faecium TX0133a01]
gi|383329357|ref|YP_005355241.1| peptide chain release factor 2 [Enterococcus faecium Aus0004]
gi|389869211|ref|YP_006376634.1| peptide chain release factor 2 [Enterococcus faecium DO]
gi|406590693|ref|ZP_11065051.1| peptide chain release factor 2 [Enterococcus sp. GMD1E]
gi|410936781|ref|ZP_11368644.1| peptide chain release factor 2 [Enterococcus sp. GMD5E]
gi|415889754|ref|ZP_11549371.1| peptide chain release factor 2 [Enterococcus faecium E4453]
gi|416140990|ref|ZP_11599326.1| peptide chain release factor 2 [Enterococcus faecium E4452]
gi|424793826|ref|ZP_18219884.1| peptide chain release factor 2 [Enterococcus faecium V689]
gi|424795781|ref|ZP_18221593.1| peptide chain release factor 2 [Enterococcus faecium S447]
gi|424849349|ref|ZP_18273806.1| peptide chain release factor 2 [Enterococcus faecium R501]
gi|424856159|ref|ZP_18280418.1| peptide chain release factor 2 [Enterococcus faecium R499]
gi|424866975|ref|ZP_18290793.1| peptide chain release factor 2 [Enterococcus faecium R497]
gi|424950542|ref|ZP_18365703.1| peptide chain release factor 2 [Enterococcus faecium R496]
gi|424953951|ref|ZP_18368878.1| peptide chain release factor 2 [Enterococcus faecium R494]
gi|424956315|ref|ZP_18371102.1| peptide chain release factor 2 [Enterococcus faecium R446]
gi|424961531|ref|ZP_18375969.1| peptide chain release factor 2 [Enterococcus faecium P1986]
gi|424966088|ref|ZP_18379932.1| peptide chain release factor 2 [Enterococcus faecium P1190]
gi|424966707|ref|ZP_18380467.1| peptide chain release factor 2 [Enterococcus faecium P1140]
gi|424971318|ref|ZP_18384761.1| peptide chain release factor 2 [Enterococcus faecium P1139]
gi|424975035|ref|ZP_18388228.1| peptide chain release factor 2 [Enterococcus faecium P1137]
gi|424978546|ref|ZP_18391459.1| peptide chain release factor 2 [Enterococcus faecium P1123]
gi|424980976|ref|ZP_18393732.1| peptide chain release factor 2 [Enterococcus faecium ERV99]
gi|424985595|ref|ZP_18398058.1| peptide chain release factor 2 [Enterococcus faecium ERV69]
gi|424989410|ref|ZP_18401677.1| peptide chain release factor 2 [Enterococcus faecium ERV38]
gi|424990527|ref|ZP_18402735.1| peptide chain release factor 2 [Enterococcus faecium ERV26]
gi|424995717|ref|ZP_18407581.1| peptide chain release factor 2 [Enterococcus faecium ERV168]
gi|424997608|ref|ZP_18409355.1| peptide chain release factor 2 [Enterococcus faecium ERV165]
gi|425000208|ref|ZP_18411784.1| peptide chain release factor 2 [Enterococcus faecium ERV161]
gi|425005546|ref|ZP_18416784.1| peptide chain release factor 2 [Enterococcus faecium ERV102]
gi|425007088|ref|ZP_18418239.1| peptide chain release factor 2 [Enterococcus faecium ERV1]
gi|425010474|ref|ZP_18421423.1| peptide chain release factor 2 [Enterococcus faecium E422]
gi|425015980|ref|ZP_18426567.1| peptide chain release factor 2 [Enterococcus faecium E417]
gi|425016230|ref|ZP_18426803.1| peptide chain release factor 2 [Enterococcus faecium C621]
gi|425021273|ref|ZP_18431540.1| peptide chain release factor 2 [Enterococcus faecium C497]
gi|425025988|ref|ZP_18434755.1| peptide chain release factor 2 [Enterococcus faecium C1904]
gi|425032037|ref|ZP_18437126.1| peptide chain release factor 2 [Enterococcus faecium 515]
gi|425035287|ref|ZP_18440130.1| peptide chain release factor 2 [Enterococcus faecium 514]
gi|425038121|ref|ZP_18442750.1| peptide chain release factor 2 [Enterococcus faecium 513]
gi|425041550|ref|ZP_18445943.1| peptide chain release factor 2 [Enterococcus faecium 511]
gi|425044673|ref|ZP_18448814.1| peptide chain release factor 2 [Enterococcus faecium 510]
gi|425048914|ref|ZP_18452794.1| peptide chain release factor 2 [Enterococcus faecium 509]
gi|425051790|ref|ZP_18455432.1| peptide chain release factor 2 [Enterococcus faecium 506]
gi|425059088|ref|ZP_18462440.1| peptide chain release factor 2 [Enterococcus faecium 504]
gi|425059823|ref|ZP_18463141.1| peptide chain release factor 2 [Enterococcus faecium 503]
gi|430819567|ref|ZP_19438218.1| peptide chain release factor 2 [Enterococcus faecium E0045]
gi|430825832|ref|ZP_19444032.1| peptide chain release factor 2 [Enterococcus faecium E0164]
gi|430827929|ref|ZP_19446059.1| peptide chain release factor 2 [Enterococcus faecium E0269]
gi|430831059|ref|ZP_19449112.1| peptide chain release factor 2 [Enterococcus faecium E0333]
gi|430834249|ref|ZP_19452256.1| peptide chain release factor 2 [Enterococcus faecium E0679]
gi|430835489|ref|ZP_19453479.1| peptide chain release factor 2 [Enterococcus faecium E0680]
gi|430838444|ref|ZP_19456390.1| peptide chain release factor 2 [Enterococcus faecium E0688]
gi|430841786|ref|ZP_19459704.1| peptide chain release factor 2 [Enterococcus faecium E1007]
gi|430843700|ref|ZP_19461599.1| peptide chain release factor 2 [Enterococcus faecium E1050]
gi|430847823|ref|ZP_19465657.1| peptide chain release factor 2 [Enterococcus faecium E1133]
gi|430849266|ref|ZP_19467047.1| peptide chain release factor 2 [Enterococcus faecium E1185]
gi|430852009|ref|ZP_19469744.1| peptide chain release factor 2 [Enterococcus faecium E1258]
gi|430855236|ref|ZP_19472945.1| peptide chain release factor 2 [Enterococcus faecium E1392]
gi|430857801|ref|ZP_19475434.1| peptide chain release factor 2 [Enterococcus faecium E1552]
gi|430860551|ref|ZP_19478150.1| peptide chain release factor 2 [Enterococcus faecium E1573]
gi|430882349|ref|ZP_19484042.1| peptide chain release factor 2 [Enterococcus faecium E1575]
gi|430946963|ref|ZP_19485743.1| peptide chain release factor 2 [Enterococcus faecium E1576]
gi|431003682|ref|ZP_19488780.1| peptide chain release factor 2 [Enterococcus faecium E1578]
gi|431033349|ref|ZP_19491195.1| peptide chain release factor 2 [Enterococcus faecium E1590]
gi|431077649|ref|ZP_19495114.1| peptide chain release factor 2 [Enterococcus faecium E1604]
gi|431112216|ref|ZP_19497592.1| peptide chain release factor 2 [Enterococcus faecium E1613]
gi|431149493|ref|ZP_19499351.1| peptide chain release factor 2 [Enterococcus faecium E1620]
gi|431230168|ref|ZP_19502371.1| peptide chain release factor 2 [Enterococcus faecium E1622]
gi|431251996|ref|ZP_19504054.1| peptide chain release factor 2 [Enterococcus faecium E1623]
gi|431301388|ref|ZP_19507707.1| peptide chain release factor 2 [Enterococcus faecium E1626]
gi|431374530|ref|ZP_19510218.1| peptide chain release factor 2 [Enterococcus faecium E1627]
gi|431514002|ref|ZP_19516050.1| peptide chain release factor 2 [Enterococcus faecium E1634]
gi|431546351|ref|ZP_19518976.1| peptide chain release factor 2 [Enterococcus faecium E1731]
gi|431586368|ref|ZP_19520883.1| peptide chain release factor 2 [Enterococcus faecium E1861]
gi|431637442|ref|ZP_19523211.1| peptide chain release factor 2 [Enterococcus faecium E1904]
gi|431737080|ref|ZP_19526036.1| peptide chain release factor 2 [Enterococcus faecium E1972]
gi|431741077|ref|ZP_19529985.1| peptide chain release factor 2 [Enterococcus faecium E2039]
gi|431742783|ref|ZP_19531667.1| peptide chain release factor 2 [Enterococcus faecium E2071]
gi|431746562|ref|ZP_19535387.1| peptide chain release factor 2 [Enterococcus faecium E2134]
gi|431748973|ref|ZP_19537725.1| peptide chain release factor 2 [Enterococcus faecium E2297]
gi|431755188|ref|ZP_19543842.1| peptide chain release factor 2 [Enterococcus faecium E2883]
gi|431764482|ref|ZP_19553021.1| peptide chain release factor 2 [Enterococcus faecium E4215]
gi|431767561|ref|ZP_19556008.1| peptide chain release factor 2 [Enterococcus faecium E1321]
gi|431771166|ref|ZP_19559552.1| peptide chain release factor 2 [Enterococcus faecium E1644]
gi|431772608|ref|ZP_19560946.1| peptide chain release factor 2 [Enterococcus faecium E2369]
gi|431775410|ref|ZP_19563683.1| peptide chain release factor 2 [Enterococcus faecium E2560]
gi|431780137|ref|ZP_19568322.1| peptide chain release factor 2 [Enterococcus faecium E4389]
gi|431781567|ref|ZP_19569712.1| peptide chain release factor 2 [Enterococcus faecium E6012]
gi|431786057|ref|ZP_19574074.1| peptide chain release factor 2 [Enterococcus faecium E6045]
gi|447912256|ref|YP_007393668.1| Peptide chain release factor 2 [Enterococcus faecium NRRL B-2354]
gi|227178781|gb|EEI59753.1| peptide chain release factor 2 [Enterococcus faecium TX1330]
gi|257814109|gb|EEV42867.1| peptide chain release factor 2 [Enterococcus faecium 1,230,933]
gi|257818383|gb|EEV45711.1| peptide chain release factor 2 [Enterococcus faecium 1,231,502]
gi|257819877|gb|EEV47025.1| peptide chain release factor 2 [Enterococcus faecium 1,231,501]
gi|257826756|gb|EEV53382.1| peptide chain release factor 2 [Enterococcus faecium 1,231,410]
gi|257831945|gb|EEV58366.1| peptide chain release factor 2 [Enterococcus faecium Com12]
gi|257835903|gb|EEV60977.1| peptide chain release factor 2 [Enterococcus faecium Com15]
gi|260074277|gb|EEW62599.1| peptide chain release factor 2 [Enterococcus faecium C68]
gi|260077176|gb|EEW64896.1| peptide chain release factor 2 [Enterococcus faecium TC 6]
gi|289162175|gb|EFD10038.1| peptide chain release factor 2 [Enterococcus faecium D344SRF]
gi|291588665|gb|EFF20498.1| peptide chain release factor 2 [Enterococcus faecium E1071]
gi|291590782|gb|EFF22498.1| peptide chain release factor 2 [Enterococcus faecium E1636]
gi|291596206|gb|EFF27469.1| peptide chain release factor 2 [Enterococcus faecium E1679]
gi|291598167|gb|EFF29266.1| peptide chain release factor 2 [Enterococcus faecium U0317]
gi|291601465|gb|EFF31736.1| peptide chain release factor 2 [Enterococcus faecium E1039]
gi|291605664|gb|EFF35105.1| peptide chain release factor 2 [Enterococcus faecium E1162]
gi|291607470|gb|EFF36812.1| peptide chain release factor 2 [Enterococcus faecium E980]
gi|292643113|gb|EFF61254.1| peptide chain release factor 2 [Enterococcus faecium PC4.1]
gi|313590058|gb|EFR68903.1| peptide chain release factor 2 [Enterococcus faecium TX0133a01]
gi|313592102|gb|EFR70947.1| peptide chain release factor 2 [Enterococcus faecium TX0133B]
gi|313594634|gb|EFR73479.1| peptide chain release factor 2 [Enterococcus faecium TX0133A]
gi|313599943|gb|EFR78786.1| peptide chain release factor 2 [Enterococcus faecium TX0133C]
gi|313641133|gb|EFS05713.1| peptide chain release factor 2 [Enterococcus faecium TX0133a04]
gi|313644947|gb|EFS09527.1| peptide chain release factor 2 [Enterococcus faecium TX0082]
gi|364090319|gb|EHM32922.1| peptide chain release factor 2 [Enterococcus faecium E4452]
gi|364094613|gb|EHM36760.1| peptide chain release factor 2 [Enterococcus faecium E4453]
gi|378939051|gb|AFC64123.1| peptide chain release factor 2 [Enterococcus faecium Aus0004]
gi|388534460|gb|AFK59652.1| peptide chain release factor 2 [Enterococcus faecium DO]
gi|402915942|gb|EJX36863.1| peptide chain release factor 2 [Enterococcus faecium V689]
gi|402917216|gb|EJX38024.1| peptide chain release factor 2 [Enterococcus faecium R501]
gi|402924020|gb|EJX44262.1| peptide chain release factor 2 [Enterococcus faecium S447]
gi|402930467|gb|EJX50118.1| peptide chain release factor 2 [Enterococcus faecium R499]
gi|402932940|gb|EJX52406.1| peptide chain release factor 2 [Enterococcus faecium R496]
gi|402937871|gb|EJX56930.1| peptide chain release factor 2 [Enterococcus faecium R494]
gi|402938278|gb|EJX57295.1| peptide chain release factor 2 [Enterococcus faecium R497]
gi|402941831|gb|EJX60501.1| peptide chain release factor 2 [Enterococcus faecium P1190]
gi|402943461|gb|EJX61946.1| peptide chain release factor 2 [Enterococcus faecium P1986]
gi|402946268|gb|EJX64552.1| peptide chain release factor 2 [Enterococcus faecium R446]
gi|402954951|gb|EJX72526.1| peptide chain release factor 2 [Enterococcus faecium P1137]
gi|402955994|gb|EJX73481.1| peptide chain release factor 2 [Enterococcus faecium P1140]
gi|402959552|gb|EJX76806.1| peptide chain release factor 2 [Enterococcus faecium P1139]
gi|402961404|gb|EJX78440.1| peptide chain release factor 2 [Enterococcus faecium P1123]
gi|402964803|gb|EJX81560.1| peptide chain release factor 2 [Enterococcus faecium ERV99]
gi|402965408|gb|EJX82126.1| peptide chain release factor 2 [Enterococcus faecium ERV69]
gi|402968826|gb|EJX85283.1| peptide chain release factor 2 [Enterococcus faecium ERV38]
gi|402976606|gb|EJX92484.1| peptide chain release factor 2 [Enterococcus faecium ERV168]
gi|402979300|gb|EJX94975.1| peptide chain release factor 2 [Enterococcus faecium ERV26]
gi|402985774|gb|EJY00954.1| peptide chain release factor 2 [Enterococcus faecium ERV165]
gi|402985895|gb|EJY01056.1| peptide chain release factor 2 [Enterococcus faecium ERV102]
gi|402989725|gb|EJY04637.1| peptide chain release factor 2 [Enterococcus faecium ERV161]
gi|402993588|gb|EJY08186.1| peptide chain release factor 2 [Enterococcus faecium E417]
gi|402995830|gb|EJY10254.1| peptide chain release factor 2 [Enterococcus faecium ERV1]
gi|402999850|gb|EJY14019.1| peptide chain release factor 2 [Enterococcus faecium E422]
gi|403006054|gb|EJY19726.1| peptide chain release factor 2 [Enterococcus faecium C1904]
gi|403007277|gb|EJY20865.1| peptide chain release factor 2 [Enterococcus faecium C497]
gi|403007570|gb|EJY21136.1| peptide chain release factor 2 [Enterococcus faecium C621]
gi|403014216|gb|EJY27233.1| peptide chain release factor 2 [Enterococcus faecium 515]
gi|403018359|gb|EJY31047.1| peptide chain release factor 2 [Enterococcus faecium 514]
gi|403020156|gb|EJY32714.1| peptide chain release factor 2 [Enterococcus faecium 513]
gi|403025838|gb|EJY37883.1| peptide chain release factor 2 [Enterococcus faecium 511]
gi|403029067|gb|EJY40842.1| peptide chain release factor 2 [Enterococcus faecium 510]
gi|403029454|gb|EJY41206.1| peptide chain release factor 2 [Enterococcus faecium 509]
gi|403036699|gb|EJY48041.1| peptide chain release factor 2 [Enterococcus faecium 506]
gi|403036807|gb|EJY48148.1| peptide chain release factor 2 [Enterococcus faecium 504]
gi|403043209|gb|EJY54131.1| peptide chain release factor 2 [Enterococcus faecium 503]
gi|404469008|gb|EKA13849.1| peptide chain release factor 2 [Enterococcus sp. GMD1E]
gi|410734811|gb|EKQ76729.1| peptide chain release factor 2 [Enterococcus sp. GMD5E]
gi|430440477|gb|ELA50727.1| peptide chain release factor 2 [Enterococcus faecium E0045]
gi|430445729|gb|ELA55451.1| peptide chain release factor 2 [Enterococcus faecium E0164]
gi|430481930|gb|ELA59071.1| peptide chain release factor 2 [Enterococcus faecium E0333]
gi|430484010|gb|ELA61045.1| peptide chain release factor 2 [Enterococcus faecium E0269]
gi|430485480|gb|ELA62386.1| peptide chain release factor 2 [Enterococcus faecium E0679]
gi|430489480|gb|ELA66094.1| peptide chain release factor 2 [Enterococcus faecium E0680]
gi|430491686|gb|ELA68138.1| peptide chain release factor 2 [Enterococcus faecium E0688]
gi|430493844|gb|ELA70128.1| peptide chain release factor 2 [Enterococcus faecium E1007]
gi|430497559|gb|ELA73596.1| peptide chain release factor 2 [Enterococcus faecium E1050]
gi|430536497|gb|ELA76865.1| peptide chain release factor 2 [Enterococcus faecium E1133]
gi|430538112|gb|ELA78411.1| peptide chain release factor 2 [Enterococcus faecium E1185]
gi|430542591|gb|ELA82699.1| peptide chain release factor 2 [Enterococcus faecium E1258]
gi|430547011|gb|ELA86953.1| peptide chain release factor 2 [Enterococcus faecium E1552]
gi|430547242|gb|ELA87178.1| peptide chain release factor 2 [Enterococcus faecium E1392]
gi|430551949|gb|ELA91699.1| peptide chain release factor 2 [Enterococcus faecium E1573]
gi|430556891|gb|ELA96382.1| peptide chain release factor 2 [Enterococcus faecium E1575]
gi|430558360|gb|ELA97779.1| peptide chain release factor 2 [Enterococcus faecium E1576]
gi|430561771|gb|ELB01025.1| peptide chain release factor 2 [Enterococcus faecium E1578]
gi|430564450|gb|ELB03634.1| peptide chain release factor 2 [Enterococcus faecium E1590]
gi|430566064|gb|ELB05185.1| peptide chain release factor 2 [Enterococcus faecium E1604]
gi|430569170|gb|ELB08187.1| peptide chain release factor 2 [Enterococcus faecium E1613]
gi|430574154|gb|ELB12932.1| peptide chain release factor 2 [Enterococcus faecium E1622]
gi|430575382|gb|ELB14098.1| peptide chain release factor 2 [Enterococcus faecium E1620]
gi|430578422|gb|ELB16974.1| peptide chain release factor 2 [Enterococcus faecium E1623]
gi|430580578|gb|ELB19045.1| peptide chain release factor 2 [Enterococcus faecium E1626]
gi|430583154|gb|ELB21543.1| peptide chain release factor 2 [Enterococcus faecium E1627]
gi|430586258|gb|ELB24519.1| peptide chain release factor 2 [Enterococcus faecium E1634]
gi|430591670|gb|ELB29699.1| peptide chain release factor 2 [Enterococcus faecium E1731]
gi|430593546|gb|ELB31532.1| peptide chain release factor 2 [Enterococcus faecium E1861]
gi|430599456|gb|ELB37162.1| peptide chain release factor 2 [Enterococcus faecium E1972]
gi|430602326|gb|ELB39901.1| peptide chain release factor 2 [Enterococcus faecium E1904]
gi|430602401|gb|ELB39974.1| peptide chain release factor 2 [Enterococcus faecium E2039]
gi|430607752|gb|ELB45053.1| peptide chain release factor 2 [Enterococcus faecium E2071]
gi|430608464|gb|ELB45710.1| peptide chain release factor 2 [Enterococcus faecium E2134]
gi|430612498|gb|ELB49538.1| peptide chain release factor 2 [Enterococcus faecium E2297]
gi|430617188|gb|ELB54062.1| peptide chain release factor 2 [Enterococcus faecium E2883]
gi|430630514|gb|ELB66869.1| peptide chain release factor 2 [Enterococcus faecium E1321]
gi|430630869|gb|ELB67209.1| peptide chain release factor 2 [Enterococcus faecium E4215]
gi|430633691|gb|ELB69845.1| peptide chain release factor 2 [Enterococcus faecium E1644]
gi|430637687|gb|ELB73686.1| peptide chain release factor 2 [Enterococcus faecium E2369]
gi|430640616|gb|ELB76450.1| peptide chain release factor 2 [Enterococcus faecium E4389]
gi|430643126|gb|ELB78882.1| peptide chain release factor 2 [Enterococcus faecium E2560]
gi|430646270|gb|ELB81761.1| peptide chain release factor 2 [Enterococcus faecium E6045]
gi|430649283|gb|ELB84669.1| peptide chain release factor 2 [Enterococcus faecium E6012]
gi|445187965|gb|AGE29607.1| Peptide chain release factor 2 [Enterococcus faecium NRRL B-2354]
Length = 327
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 104/151 (68%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L +E++D++I +DL+I RA G GGQ++NK E+AVRITH+PTG V
Sbjct: 174 HTSFCSVDVMPEL-DETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+ LKAKL + E++ E +RG+ + WG QIR+YVFHPY
Sbjct: 233 ASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDG+L+ FI YLK
Sbjct: 293 MVKDHRTNVETGNVQAVMDGDLDLFIDGYLK 323
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FWD+ AQ+ + K+ + ++++ +V++ +E DA + EEA
Sbjct: 2 AEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVEMLQE--EPDAAMQEEA 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ I L++ + +EL+ LL GPYD+ A++ + GAGGT++Q
Sbjct: 60 ETRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQ 102
>gi|334139368|ref|ZP_08512760.1| peptide chain release factor 2 [Paenibacillus sp. HGF7]
gi|333602181|gb|EGL13612.1| peptide chain release factor 2 [Paenibacillus sp. HGF7]
Length = 333
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 104/151 (68%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +V+P + E+ ++V I EDL+I RA G GGQ++N ++AVRITH+PTGV V
Sbjct: 176 HTSFVSCDVVPEI-EDDVEVDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ L++KL E++ + +IRG+ WG QIR+YVFHPY
Sbjct: 235 TCQTERSQIKNRERAMKHLRSKLYEKKIEEQEKHLAEIRGEQSDIAWGSQIRSYVFHPYS 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDG+L+PFI +YL+
Sbjct: 295 MVKDHRTTEETGNVGAVMDGDLDPFIDAYLR 325
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
MK A FWD+ +AQ+ + L +K ++ + +D + +L +E D +
Sbjct: 1 MKMAAPDFWDDNEKAQKIIGELNAIKSVVDQFQALNNEYEDLDVMAQLADE--ENDEDMA 58
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E A +K + + L+ F+L LL+ PYD+ A++ + GAGGT++Q
Sbjct: 59 AELADGLKGVLRKLEDFQLQLLLNQPYDRLNAILELHPGAGGTESQ 104
>gi|257886811|ref|ZP_05666464.1| peptide chain release factor 2 [Enterococcus faecium 1,141,733]
gi|431762435|ref|ZP_19550997.1| peptide chain release factor 2 [Enterococcus faecium E3548]
gi|257822865|gb|EEV49797.1| peptide chain release factor 2 [Enterococcus faecium 1,141,733]
gi|430625127|gb|ELB61777.1| peptide chain release factor 2 [Enterococcus faecium E3548]
Length = 327
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 104/151 (68%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L +E++D++I +DL+I RA G GGQ++NK E+AVRITH+PTG V
Sbjct: 174 HTSFCSVDVMPEL-DETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+ LKAKL + E++ E +RG+ + WG QIR+YVFHPY
Sbjct: 233 ASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDG+L+ FI YLK
Sbjct: 293 MVKDHRTNVETGNVQAVMDGDLDLFIDGYLK 323
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FWD+ AQ+ + K+ + ++++ +V + +E DA + EEA
Sbjct: 2 AEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVDMLQE--EPDAVMQEEA 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ I L++ ++ +EL+ LL GPYD+ A++ + GAGGT++Q
Sbjct: 60 ETRINALDEKMNTYELSMLLDGPYDRNNAIVELHPGAGGTESQ 102
>gi|355681869|ref|ZP_09062157.1| peptide chain release factor 2 [Clostridium citroniae WAL-17108]
gi|354811280|gb|EHE95913.1| peptide chain release factor 2 [Clostridium citroniae WAL-17108]
Length = 338
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 107/164 (65%), Gaps = 4/164 (2%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF ++MP + E+ P+ D+ I R+ G GGQ++NK +A+RITH PTG V
Sbjct: 174 QTSFVSCDIMPDIEEDIDIEINPD-DIRIDTYRSSGAGGQHINKTSSAIRITHFPTGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ NK KA+ LK+KL ++ +E++A++ IRGD + WG QIR+YV PY
Sbjct: 233 TCQNERSQFQNKDKAMQMLKSKLFMLKQEEQAAKAAGIRGDVKENGWGSQIRSYVLQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDAN 307
+VKD RTG E+ ++ +V+DG L+PFI +YL++ MSL + N
Sbjct: 293 MVKDHRTGEESGNVDAVLDGGLDPFISAYLRW---MSLGCPNKN 333
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ FWDN ++ ++ ++KD++ + + + DD ++++ E DA L+ E
Sbjct: 3 EPGFWDNPEKSTRMVREAKNLKDEVETFRELEQEYDDIQVMIQMGYE--ENDASLIPEIE 60
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
++ + L++ + LLSG YD A++ + AGAGGT++
Sbjct: 61 EMLSHFAETLEKMRMKLLLSGEYDANNAILRLNAGAGGTES 101
>gi|403383557|ref|ZP_10925614.1| peptide chain release factor 2 [Kurthia sp. JC30]
Length = 326
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 101/151 (66%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF ++MP +E + V I EDL+I RA G GGQ++NK E+AVRITH+PT V
Sbjct: 174 HTSFVSCDIMPEFTDEVV-VDIRTEDLKIDTYRASGAGGQHINKTESAVRITHLPTNTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQL N+ A+ L+AKL + E++ + +IRG+ + W QIR+YVFHPY
Sbjct: 233 ACQAERSQLKNRETAMKMLQAKLYQLKLEEKQEHLDEIRGEQKEIGWSSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDG+L+PFI +YL+
Sbjct: 293 MVKDHRTNEETGNVQAVMDGDLDPFINAYLR 323
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
D SFW+++++AQ + +KD +N + + + + L + D +LEE
Sbjct: 3 DPSFWNDQSKAQAIINESKGLKDIVNEF--YALQGEQEELEMTLELLKEEMDDDMLEELG 60
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ + +FEL L+SGPYDK A++ + GAGGT++Q
Sbjct: 61 EAMHAFEARVAEFELQLLMSGPYDKNNAILELHPGAGGTESQ 102
>gi|56416847|ref|YP_153921.1| peptide chain release factor 2 [Anaplasma marginale str. St.
Maries]
gi|56388079|gb|AAV86666.1| peptide chain release factor 2 [Anaplasma marginale str. St.
Maries]
Length = 338
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 106/155 (68%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV P+ ++ +D++I E+DL I RA G GGQ+VNK E+AVRITH+P+G+ V
Sbjct: 181 HTSFASVEVSPI-ADDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVV 239
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C RSQ N+ +A S L+++L + +++ ++ Q WG QIR+YV HPY+
Sbjct: 240 QCQTSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYR 299
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD+RTGHET D+ +V+DG+L+ FI + L YK S
Sbjct: 300 MVKDLRTGHETGDVDAVLDGDLDKFIAAALTYKLS 334
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 34 LAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDST 93
+ EL+ + + +S WD++ A++ L V++ +L F+ + V+L + D +
Sbjct: 1 MEELDSRCSSASLWDDQENAKKLLSERARVEE---VLASFRALEKEYAECVELLDLADES 57
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
D+ L+ S + +L + + Q + + SG D G + I GAGGT++
Sbjct: 58 DSEFLDGLWSALTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTES 107
>gi|431757173|ref|ZP_19545804.1| peptide chain release factor 2 [Enterococcus faecium E3083]
gi|430619462|gb|ELB56289.1| peptide chain release factor 2 [Enterococcus faecium E3083]
Length = 327
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 104/151 (68%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L +E++D++I +DL+I RA G GGQ++NK E+AVRITH+PTG V
Sbjct: 174 HTSFCSVDVMPEL-DETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+ LKAKL + E++ E +RG+ + WG QIR+YVFHPY
Sbjct: 233 ASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDG+L+ FI YLK
Sbjct: 293 MVKDHRTNVETGNVQAVMDGDLDLFIDGYLK 323
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FWD+ AQ+ + K+ + ++++ +V++ +E DA + EEA
Sbjct: 2 AEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVEMLQE--EPDAAMQEEA 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ I L + + +EL+ LL GPYD+ A++ + GAGGT++Q
Sbjct: 60 ETRINALGEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQ 102
>gi|152977397|ref|YP_001376914.1| peptide chain release factor 2 [Bacillus cytotoxicus NVH 391-98]
gi|152026149|gb|ABS23919.1| peptide chain release factor 2 [Bacillus cytotoxicus NVH 391-98]
Length = 327
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 105/155 (67%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P +E +++++ EDL++ RA G GGQ+VN ++AVRITHIPT V
Sbjct: 174 HTSFVSCEVVPEFNDE-VEIEVRTEDLKVDTYRASGAGGQHVNTTDSAVRITHIPTNTIV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKD RT E ++ +VMDGE++PFI +YL+ + S
Sbjct: 293 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSRIS 327
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 62/104 (59%), Gaps = 6/104 (5%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEE 100
++ FWD++ AQ + +KD ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 3 EAGFWDDQQGAQTVINEANALKD---MVGKFR-QLDETFENLEVTHELLKEEYDKDLHEE 58
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S +K L + ++++EL LLS PYDK A++ + GAGGT++Q
Sbjct: 59 LESEVKSLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQ 102
>gi|164687096|ref|ZP_02211124.1| hypothetical protein CLOBAR_00722 [Clostridium bartlettii DSM
16795]
gi|164603981|gb|EDQ97446.1| peptide chain release factor 2 [Clostridium bartlettii DSM 16795]
Length = 349
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 103/164 (62%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF +V P L ++ +DV+I DL+I R+ G GGQ+VNK ++
Sbjct: 180 IVRISPFDASGKRHTSFVSVDVTPEL-DDKIDVEINPNDLKIDTYRSSGAGGQHVNKTDS 238
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITHIPTG+ V+C ERSQ ANK A+ LK KL+ + E + I+ I+G + W
Sbjct: 239 AVRITHIPTGIVVQCQNERSQFANKDTAMKMLKGKLIHLKELENKERIEDIQGKYSQITW 298
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIR+YVF PYKLVKD RT E ++ SVMDG + FI YLK
Sbjct: 299 GSQIRSYVFQPYKLVKDHRTNAEIGNVDSVMDGNINLFINEYLK 342
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 11/121 (9%)
Query: 25 AGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIV 84
A +Q+ E+E+ + FWD+ +AQ+ LQ +D+K N++ +F+ D I
Sbjct: 11 AQIQKYEEEINK-------QDFWDDNEKAQKILQQNSDLK---NIIAEFEGLNSDLEEIE 60
Query: 85 KLTEEMDSTDAGLLE-EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
L E + +E + IK+L +D+ ++ LL+G YD AV+SI AG GG DA
Sbjct: 61 ILIELGLEEEDESIEHDIEKSIKKLEDKIDEVKIKTLLNGKYDVNNAVLSINAGTGGLDA 120
Query: 144 Q 144
Q
Sbjct: 121 Q 121
>gi|269958738|ref|YP_003328525.1| peptide chain release factor 2 [Anaplasma centrale str. Israel]
gi|269848567|gb|ACZ49211.1| peptide chain release factor 2 [Anaplasma centrale str. Israel]
Length = 338
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 106/155 (68%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV P+ ++ +D++I E+DL I RA G GGQ+VNK E+AVRITH+P+G+ V
Sbjct: 181 HTSFASVEVSPI-ADDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVV 239
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C RSQ N+ +A S L+++L + +++ ++ Q WG QIR+YV HPY+
Sbjct: 240 QCQTSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYR 299
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD+RTGHET D+ +V+DG+L+ FI + L YK S
Sbjct: 300 MVKDLRTGHETGDVDAVLDGDLDKFIAAALTYKLS 334
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 34 LAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDST 93
+ EL+ + + +S WD++ A++ L V++ +L F+ + V+L + D +
Sbjct: 1 MEELDSRCSSASLWDDQENAKKLLSERARVEE---VLASFRALEKEYAECVELLDVADES 57
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
D+ L+ S + +L + + Q + + SG D G + I GAGGT++
Sbjct: 58 DSEFLDGLWSALTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTES 107
>gi|222475212|ref|YP_002563628.1| peptide chain release factor 2 [Anaplasma marginale str. Florida]
gi|255003190|ref|ZP_05278154.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str.
Puerto Rico]
gi|222419349|gb|ACM49372.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str.
Florida]
Length = 338
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 106/155 (68%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV P+ ++ +D++I E+DL I RA G GGQ+VNK E+AVRITH+P+G+ V
Sbjct: 181 HTSFASVEVSPI-ADDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVV 239
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C RSQ N+ +A S L+++L + +++ ++ Q WG QIR+YV HPY+
Sbjct: 240 QCQTSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYR 299
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD+RTGHET D+ +V+DG+L+ FI + L YK S
Sbjct: 300 MVKDLRTGHETGDVDAVLDGDLDKFIAAALTYKLS 334
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 34 LAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDST 93
+ EL+ + + +S WD++ A++ L V++ +L F+ + V+L + D +
Sbjct: 1 MEELDSRCSSASLWDDQENAKKLLSERARVEE---VLASFRALEKEYAECVELLDVADES 57
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
D+ L+ S + +L + + Q + + SG D G + I GAGGT++
Sbjct: 58 DSEFLDGLWSALTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTES 107
>gi|366053902|ref|ZP_09451624.1| peptide chain release factor 2 [Lactobacillus suebicus KCTC 3549]
Length = 332
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 110/155 (70%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++S +V I ++DL + R+ G GGQ++NK +AVRITHIPTG+ V
Sbjct: 174 HTSFASVDVMPEL-DDSTNVDISDDDLRVDVFRSSGAGGQHINKTSSAVRITHIPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ A++ LK+KL + EE++A + +I+G+ + WG QIR+YVFHPY
Sbjct: 233 SSQAQRSQLQNRQTAMNMLKSKLYELEEEKKAKKRAEIQGEQLDIGWGSQIRSYVFHPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKD RT ET D +VMDG+L+PFI +YL+++ S
Sbjct: 293 LVKDHRTNFETHDGNAVMDGDLDPFINAYLQWRLS 327
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDD-AVTIVKLTEEMDSTDAGLLEE 100
A+ FW++ +AQE + +K+K + + +DD VT L EE +DA + +E
Sbjct: 2 AEPGFWNDGQKAQELIGENNQLKEKRDTFVGLRDGVDDLRVTWSLLQEE---SDADMQQE 58
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
++ + + L+Q+ L QLL+ PYD A++ I GAGGT++Q
Sbjct: 59 FDDQLQSVKQKLEQYRLEQLLNEPYDANNAILEIHPGAGGTESQ 102
>gi|227824555|ref|ZP_03989387.1| peptide chain release factor [Acidaminococcus sp. D21]
gi|226905054|gb|EEH90972.1| peptide chain release factor [Acidaminococcus sp. D21]
Length = 382
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 104/151 (68%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP + + +++V I +D+ + + RA G GGQ+VNK +AVR+TH+PTG+ V
Sbjct: 229 HTSFAAVDVMPEI-DNTVEVNINMDDVRVDYYRASGAGGQHVNKTSSAVRMTHLPTGIVV 287
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL NK + L L+AKL + + +I + GD EWG QIR+YVF PY
Sbjct: 288 QCQNERSQLQNKERCLQLLRAKLFEYEKAIQDQKISDLAGDYQAIEWGSQIRSYVFQPYT 347
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RTG ET +I +VMDG+L+ F++SYL+
Sbjct: 348 LVKDHRTGAETGNIQAVMDGDLDLFVESYLR 378
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 77/138 (55%), Gaps = 2/138 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
LR + +R+ E++ ++ ++ + +L+ + A FWD+ +AQ+ Q ++K +
Sbjct: 22 LRPQIGELRNRLGELKTGLKIEPKKERIQDLDYQMAAPGFWDDPDKAQKVAQEANNLKSE 81
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
++ T +TK+DD T+ ++ M+ D L+ E S ++ L + EL LLS YD
Sbjct: 82 VDTFTSLETKVDDLDTLWEMA--MEEKDDTLVSEMESELEGAKHTLSELELGMLLSDEYD 139
Query: 127 KEGAVISITAGAGGTDAQ 144
A++++ AGAGGT+AQ
Sbjct: 140 ANNAIMNLHAGAGGTEAQ 157
>gi|167755601|ref|ZP_02427728.1| hypothetical protein CLORAM_01115 [Clostridium ramosum DSM 1402]
gi|237734350|ref|ZP_04564831.1| peptide chain release factor 2 [Mollicutes bacterium D7]
gi|365831223|ref|ZP_09372775.1| peptide chain release factor 2 [Coprobacillus sp. 3_3_56FAA]
gi|374624896|ref|ZP_09697313.1| peptide chain release factor 2 [Coprobacillus sp. 8_2_54BFAA]
gi|167704540|gb|EDS19119.1| peptide chain release factor 2 [Clostridium ramosum DSM 1402]
gi|229382580|gb|EEO32671.1| peptide chain release factor 2 [Coprobacillus sp. D7]
gi|365261700|gb|EHM91601.1| peptide chain release factor 2 [Coprobacillus sp. 3_3_56FAA]
gi|373916179|gb|EHQ47927.1| peptide chain release factor 2 [Coprobacillus sp. 8_2_54BFAA]
Length = 365
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 109/151 (72%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP E ++++I DL+I RA G GGQ++NK ++AVRITH+PT + V
Sbjct: 213 HTSFASVDVMPEFNNE-IEIEIQSTDLKIDTYRASGAGGQHINKTDSAVRITHLPTNIVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C +RSQ+ N+ +A+ LK+KL + E++ASE+K+++G+ + WG QIR+YV HPY
Sbjct: 272 TCQSQRSQIQNREQAMVMLKSKLYQLMLEKQASELKELKGEQKEIAWGSQIRSYVLHPYS 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD R+G+E+++ +V+DG+L+ FI +YLK
Sbjct: 332 LVKDNRSGYESNNPKAVLDGDLDGFIYAYLK 362
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
+ Y ++ + A + E S ++ +E+ L + FWD+ +A+ T L
Sbjct: 2 ELYEIKNGLTKAHLLMTEFYQSIDIEAYRREIEGLTVITLQEGFWDDANKAKVTYDKLNK 61
Query: 63 VK---DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQ 119
+K D+ +LL T +D+ +VK TE+ + + +LE ++ + K L +FE
Sbjct: 62 MKKTTDQYDLLETTLTSLDETYELVKNTEDQEFKE--ILESDYTVFE---KELSKFETMM 116
Query: 120 LLSGPYDKEGAVISITAGAGGTDAQ 144
LLSG +D A++ I GAGGT++Q
Sbjct: 117 LLSGEHDDLNAIVEIHPGAGGTESQ 141
>gi|304317582|ref|YP_003852727.1| hypothetical protein Tthe_2166 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779084|gb|ADL69643.1| hypothetical protein Tthe_2166 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 365
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 109/155 (70%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P + ++ + V I EDL+I R+ G GGQ+VNK E+A+RITHIPTG+ V
Sbjct: 212 HTSFALVEVLPEI-DDDIKVDIRPEDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGIIV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ+ N+ A+ LKAKL+ + +++ +I+ ++G+ +A WG QIR+YVF PY
Sbjct: 271 QCQSERSQMQNRETAMKMLKAKLMDLMIKEQKEKIEDLKGEHKEAGWGNQIRSYVFQPYT 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKD RT E ++ +VMDG+++ FI +YLK K S
Sbjct: 331 LVKDHRTNFEVGNVNAVMDGDIDEFINAYLKQKVS 365
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 80/129 (62%), Gaps = 2/129 (1%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
D ++E+ AS ++ L++E+AE++ K A+ FW++ ++QE + L D+K+ I+ +
Sbjct: 14 DTIKEMGASLDIEGLKREVAEIDKKMAEPDFWNDLQKSQELSKKLKDLKELISEYESIEK 73
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
+D +++L ++ D L +E K L+K ++ ++ LLSGPYD+ A++SI
Sbjct: 74 LCEDLNALIELG--IEEGDESLSQEVHEEYKSLSKKINDMKIKTLLSGPYDRNNAILSIH 131
Query: 136 AGAGGTDAQ 144
AGAGGT+AQ
Sbjct: 132 AGAGGTEAQ 140
>gi|443244925|ref|YP_007378150.1| peptide chain release factor 2 (RF-2) [Nonlabens dokdonensis DSW-6]
gi|442802324|gb|AGC78129.1| peptide chain release factor 2 (RF-2) [Nonlabens dokdonensis DSW-6]
Length = 368
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ V PL ++S+++ I D+ F+R+ G GGQNVNKVET
Sbjct: 195 LVRISPFDSNAKRHTSFASVYVYPL-ADDSIEIDINPADISWDFARSSGAGGQNVNKVET 253
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
+TH P+G+ + +E RSQL N+ KA+ LK++L I ++R + ++I +K EW
Sbjct: 254 KAILTHHPSGIVIHNSETRSQLENREKAMQMLKSQLFEIELQKRNAARQEIESGKMKIEW 313
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYV HPYKL+KDVRTGHET ++ +V++G+L+ F+K++L
Sbjct: 314 GSQIRNYVLHPYKLIKDVRTGHETGNVDAVLNGDLDAFLKAFL 356
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
V+ +RV +++ + + E+ LE K FW++ EA+ ++ L ++K
Sbjct: 7 VKELQERVIKLKNYLQIDAKQIEITNLEEKTFSPDFWNDPKEAESIMKVL---RNKKQWT 63
Query: 71 TDFKTKMDDAVTIVKLTE---EMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDK 127
TD+ T AVT+++ E E D ++ N +++ E +LS D
Sbjct: 64 TDYAT----AVTLIEDLEVLYEFFKEDEATEQDVMLKYNAANDLIEKLEFKNMLSNEGDD 119
Query: 128 EGAVISITAGAGGTDA 143
AV+ ITAGAGGT++
Sbjct: 120 MSAVLQITAGAGGTES 135
>gi|384267063|ref|YP_005422770.1| peptide chain release factor 2 [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387900157|ref|YP_006330453.1| Peptide chain release factor [Bacillus amyloliquefaciens Y2]
gi|380500416|emb|CCG51454.1| peptide chain release factor 2 [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387174267|gb|AFJ63728.1| Peptide chain release factor [Bacillus amyloliquefaciens Y2]
Length = 327
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 105/155 (67%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP EE +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT V V
Sbjct: 174 HTSFVSCEVMPEFNEE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQTERSQIKNRDRAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E ++ +VMDG+++ FI +YL+ K S
Sbjct: 293 MVKDHRTNTEMGNVQAVMDGDIDIFIDAYLRSKLS 327
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FW+++ +AQ + +K+ +N ++ L +E D L +E
Sbjct: 2 AEPEFWNDQQKAQTVINEANGLKEYVNSYHQLSESHEELQMTHDLLKE--DPDQDLQQEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+K L K L++FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 EKELKSLTKELNEFELQLLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|16080582|ref|NP_391409.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
str. 168]
gi|402777692|ref|YP_006631636.1| peptide chain release factor 2 [Bacillus subtilis QB928]
gi|430756690|ref|YP_007207969.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|6174964|sp|P28367.2|RF2_BACSU RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|2331287|gb|AAC97534.1| release factor 2 [Bacillus subtilis]
gi|2618874|gb|AAC67303.1| putative peptide chain release factor RF-2 [Bacillus subtilis]
gi|2636055|emb|CAB15546.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
str. 168]
gi|402482871|gb|AFQ59380.1| Peptide chain release factor 2 [Bacillus subtilis QB928]
gi|430021210|gb|AGA21816.1| Peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
str. BSP1]
Length = 366
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 105/155 (67%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP +E +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT V V
Sbjct: 213 HTSFVSCEVMPEFNDE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 272 TCQTERSQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E ++ +VMDG+++ FI +YL+ K S
Sbjct: 332 MVKDHRTNTEMGNVQAVMDGDIDTFIDAYLRSKLS 366
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 2/138 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R ++E + R+ + R S L+ E +AEL+ + AD FW+++ +AQ + +KD
Sbjct: 6 IRAELENMASRLADFRGSLDLESKEARIAELDEQMADPEFWNDQQKAQTVINEANGLKDY 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+N ++ L +E TD L E +K L K ++FEL LLS PYD
Sbjct: 66 VNSYKKLNESHEELQMTHDLLKEEPDTDLQL--ELEKELKSLTKEFNEFELQLLLSEPYD 123
Query: 127 KEGAVISITAGAGGTDAQ 144
K A++ + GAGGT++Q
Sbjct: 124 KNNAILELHPGAGGTESQ 141
>gi|406667205|ref|ZP_11074965.1| Peptide chain release factor 2 [Bacillus isronensis B3W22]
gi|405384897|gb|EKB44336.1| Peptide chain release factor 2 [Bacillus isronensis B3W22]
Length = 328
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 108/155 (69%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP +E +++ I EDL++ RA G GGQ++N ++AVRITH+PTGV V
Sbjct: 174 HTSFVSCDVMPEFNDE-IEIDIRTEDLKVDTYRATGAGGQHINTTDSAVRITHLPTGVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ+ N+ A+ LK+KL + E++ +++ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 QCQSERSQIKNRDAAMKMLKSKLYQLEIEKQQAQLDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT ET ++ +VMDG+L+ FI +YL+ K S
Sbjct: 293 MVKDHRTSAETGNVGAVMDGDLDIFITAYLRSKIS 327
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 46 FWDNRAEAQETLQALTDVK---DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
FW+++ AQ + +K ++ N L D + ++ + +++ + + + L +E A
Sbjct: 6 FWNDQNGAQAIINESNGIKAVVNEFNELVDTQENLEMTLELLREEPDEELQEE-LGKELA 64
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E +++FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 65 ----EFQTKMEEFELQMLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|313675052|ref|YP_004053048.1| bacterial peptide chain release factor 2 (brf-2) [Marivirga
tractuosa DSM 4126]
gi|312941750|gb|ADR20940.1| bacterial peptide chain release factor 2 (bRF-2) [Marivirga
tractuosa DSM 4126]
Length = 363
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 111/163 (68%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ G TSF+ V P++ ++S+++ I D+E+ SR+GG GGQNVNKVET
Sbjct: 194 LVRISPFDSGGRRHTSFASVYVYPVV-DDSIEIDIHPNDVELHTSRSGGAGGQNVNKVET 252
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
V++TH PTG+ V C R+QL N+ +A+ LK++L I E+R++E ++ K ++
Sbjct: 253 KVQLTHKPTGIVVVCQANRTQLGNREEAMKMLKSQLYQIEVEKRSAERNEVEAGKKKIDF 312
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYV HPYKL+KD RTG E +D+ +V+DG+L +IK+YL
Sbjct: 313 GSQIRNYVLHPYKLIKDARTGVERTDVQNVLDGDLNDYIKAYL 355
>gi|421730073|ref|ZP_16169202.1| peptide chain release factor 2 [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|407076039|gb|EKE49023.1| peptide chain release factor 2 [Bacillus amyloliquefaciens subsp.
plantarum M27]
Length = 327
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 105/155 (67%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP EE +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT V V
Sbjct: 174 HTSFVSCEVMPEFNEE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQTERSQIKNRDRAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E ++ +VMDG+++ FI +YL+ K S
Sbjct: 293 MVKDHRTNTEMGNVQAVMDGDIDIFIDAYLRSKLS 327
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FW+++ +AQ + +K+ +N ++ L +E D L +E
Sbjct: 2 AEPEFWNDQQKAQTVINEANGLKEYVNSYHQLSESHEELQMTHDLLKE--EPDQDLQQEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+K L + L++FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 EKELKSLTRELNEFELQLLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|344204295|ref|YP_004789438.1| peptide chain release factor 2 [Muricauda ruestringensis DSM 13258]
gi|343956217|gb|AEM72016.1| peptide chain release factor 2 [Muricauda ruestringensis DSM 13258]
Length = 366
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 105/150 (70%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL+ ++S+++++ D+EI+ +R+ G GGQNVNKVET V++ H PTG+ +
Sbjct: 208 HTSFASVYVYPLV-DDSIEIEVNPSDIEITTARSSGAGGQNVNKVETKVQLVHKPTGIQI 266
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C++ RSQ N+ A+ LK++L I ++ +I +K EWG QIRNYV HPYK
Sbjct: 267 SCSDSRSQHDNRATAVKMLKSQLYEIELRKKQEARAEIESSKMKIEWGSQIRNYVMHPYK 326
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRTG ET ++ +VMDG+L+ F+K+YL
Sbjct: 327 LVKDVRTGEETGNVDAVMDGDLDAFLKAYL 356
>gi|262340849|ref|YP_003283704.1| peptide chain release factor 2 [Blattabacterium sp. (Blattella
germanica) str. Bge]
gi|262272186|gb|ACY40094.1| peptide chain release factor 2 [Blattabacterium sp. (Blattella
germanica) str. Bge]
Length = 365
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 112/166 (67%), Gaps = 1/166 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
+I I+ + TSFS V P++ +++D+ I D++ R+ G GGQNVNKVET
Sbjct: 194 LIRISPFDSNSKRHTSFSSVYVYPMI-NDNIDIDIKTSDIQWETFRSSGAGGQNVNKVET 252
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
VR+ H PTG+T+ TE RSQ+ N+ KAL LK++L I ++ + ++I+ + K EW
Sbjct: 253 GVRLRHHPTGITIENTESRSQMQNRQKALLLLKSRLFEIEMIKKNEKKEKIKSEKKKIEW 312
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
G QIRNY+ HPYKLVKD+RTG++T+ I SVMDGE++ F+K +L YK
Sbjct: 313 GSQIRNYIMHPYKLVKDLRTGYQTTQIQSVMDGEIDTFLKKFLMYK 358
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/136 (18%), Positives = 70/136 (51%), Gaps = 5/136 (3%)
Query: 8 RKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI 67
++++++ S+++ + + Q++ L + + + + +FW + ++++++++L ++K I
Sbjct: 4 KEEIQSISEKIHRMHDVLKIDQIKAILDKEQNQILNPNFWKDYKKSKDSIRSLHEMKTSI 63
Query: 68 NLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDK 127
K +++ I ++E + ++ ++ K L E LLS D
Sbjct: 64 KDFMKLKNALEELEIIFSFSKEENLEKELEIQFHKTM-----KLLSNIEFKNLLSEKEDS 118
Query: 128 EGAVISITAGAGGTDA 143
A++ I++GAGGT++
Sbjct: 119 LNAILQISSGAGGTES 134
>gi|154687644|ref|YP_001422805.1| hypothetical protein RBAM_032440 [Bacillus amyloliquefaciens FZB42]
gi|375363964|ref|YP_005132003.1| peptide chain release factor 2 [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|385266424|ref|ZP_10044511.1| RF-1 domain-containing protein [Bacillus sp. 5B6]
gi|394991070|ref|ZP_10383878.1| hypothetical protein BB65665_01519 [Bacillus sp. 916]
gi|429506822|ref|YP_007188006.1| peptide chain release factor 2 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|451345319|ref|YP_007443950.1| peptide chain release factor 2 [Bacillus amyloliquefaciens IT-45]
gi|452857151|ref|YP_007498834.1| Peptide chain release factor 2 [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|154353495|gb|ABS75574.1| PrfB [Bacillus amyloliquefaciens FZB42]
gi|371569958|emb|CCF06808.1| peptide chain release factor 2 [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|385150920|gb|EIF14857.1| RF-1 domain-containing protein [Bacillus sp. 5B6]
gi|393808053|gb|EJD69364.1| hypothetical protein BB65665_01519 [Bacillus sp. 916]
gi|429488412|gb|AFZ92336.1| peptide chain release factor 2 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|449849077|gb|AGF26069.1| peptide chain release factor 2 [Bacillus amyloliquefaciens IT-45]
gi|452081411|emb|CCP23179.1| Peptide chain release factor 2 [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 327
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 105/155 (67%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP EE +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT V V
Sbjct: 174 HTSFVSCEVMPEFNEE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQTERSQIKNRDRAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E ++ +VMDG+++ FI +YL+ K S
Sbjct: 293 MVKDHRTNTEMGNVQAVMDGDIDIFIDAYLRSKLS 327
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FW+++ +AQ + +K+ +N ++ L +E D L +E
Sbjct: 2 AEPEFWNDQQKAQTVINEANGLKEYVNSYHQLSESHEELQMTHDLLKE--EPDQDLQQEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+K L K L++FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 EKELKSLTKELNEFELQLLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|291523975|emb|CBK89562.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
rectale DSM 17629]
Length = 330
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 142/270 (52%), Gaps = 29/270 (10%)
Query: 52 EAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKA 111
E Q+ L D I + T + D I++L T++ + AA + + +K
Sbjct: 58 EIQQMLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTES--CDWAAMLFRMYSKW 115
Query: 112 LDQFELT-QLLSGPYDKEGAVISITAGAGGTDA-------------------------QT 145
D+ T ++L E + SIT G +A QT
Sbjct: 116 ADKKGFTLEVLDSLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQT 175
Query: 146 SFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRC 205
SF +VMP + EE +D+++ +ED+ I R+ G GGQ++NK +A+RITH P+G+ V+C
Sbjct: 176 SFVSCDVMPDI-EEDLDIEVKDEDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVVQC 234
Query: 206 TEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLV 265
ERSQ NK KA+ LKAKL ++ +E+ A++ IRG+ + WG QIR+YV PY +V
Sbjct: 235 QNERSQHMNKDKAMQMLKAKLYLLKQEENAAKEAGIRGEVKEIGWGSQIRSYVLQPYTMV 294
Query: 266 KDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
KD RT ET + +V+DG ++ FI YLK+
Sbjct: 295 KDHRTDVETGNADAVLDGNIDIFINGYLKW 324
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M+A D FWD+ ++Q ++ L +KD + K + +D T++++ E D L+
Sbjct: 1 MEAPD--FWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEMGYE--ENDESLI 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
E ++ + D + LLSG YDK A++ + AGAGGT++
Sbjct: 57 PEIQQMLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTES 101
>gi|210615399|ref|ZP_03290526.1| hypothetical protein CLONEX_02742 [Clostridium nexile DSM 1787]
gi|210150248|gb|EEA81257.1| hypothetical protein CLONEX_02742 [Clostridium nexile DSM 1787]
Length = 313
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 109/151 (72%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ +V+P + E+ +D+++ ++DL+I RA G GGQ+VNK +A+RITHIPTG+ V
Sbjct: 158 QTSFASCDVVPDI-EDDIDIELNDDDLKIDTYRASGAGGQHVNKTSSAIRITHIPTGIVV 216
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK KA+ LKAKL ++ E+++A ++ IRG+ + +G QIR+YV PY
Sbjct: 217 QCQNERSQHNNKEKAMQMLKAKLYLLKEQEQAEKVSDIRGEIKEIGFGNQIRSYVMQPYT 276
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E+ ++ SV+DG ++ F+ +YLK
Sbjct: 277 LVKDHRTNVESGNVSSVLDGNIDLFMNAYLK 307
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 57 LQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFE 116
L++L D +K++ LT T +D ++++ D D LL E S + + ++
Sbjct: 4 LKSLKDFLEKVSQLT---TSYEDIGVLIEMA--YDENDESLLPEIESELTAFQQGYEEIR 58
Query: 117 LTQLLSGPYDKEGAVISITAGAGGTDA 143
+ LLSG YDK+ A++++ AGAGGT++
Sbjct: 59 IQTLLSGEYDKDNAIVTLHAGAGGTES 85
>gi|333398790|ref|ZP_08480603.1| peptide chain release factor 2 [Leuconostoc gelidum KCTC 3527]
Length = 372
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 109/156 (69%), Gaps = 1/156 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++++DV+I ++D+++ R+GG GGQNVNKV T VR+TH PTG+ V
Sbjct: 214 HTSFVSVDVMPEL-DDTIDVEIRDDDVKMDVFRSGGAGGQNVNKVSTGVRLTHEPTGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T ER+Q N+ A+ LK KL + E++ +E + GD ++ WG QIR+YV HPY+
Sbjct: 273 SSTVERTQYGNRDYAMRLLKGKLYQLELEKQEAERAALTGDKLENGWGSQIRSYVLHPYQ 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSM 299
+VKD RT +ET+ V+DG+L+PFI +YL+++ S+
Sbjct: 333 MVKDHRTDYETNQPQQVLDGDLDPFINAYLQWQLSL 368
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 73/128 (57%), Gaps = 1/128 (0%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
+ + RA+ L+ L +E+A+ E + +S FWD+ +AQ+ ++ +K++ + +
Sbjct: 15 ENIARFRATLDLEALTEEIADFENRMTESGFWDDNVKAQKIIEENNVLKNRRDSFLNLTN 74
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
+ ++ ++++ E D TD+ ++ E I + K ++ + L QLL+ PYD A++ +
Sbjct: 75 QAEEIDLLIEMLSE-DVTDSEMMTELEESIAKAQKDIETYNLEQLLTEPYDANNAILEVH 133
Query: 136 AGAGGTDA 143
G+GGT++
Sbjct: 134 PGSGGTES 141
>gi|427406560|ref|ZP_18896765.1| peptide chain release factor 2 [Selenomonas sp. F0473]
gi|425707990|gb|EKU71031.1| peptide chain release factor 2 [Selenomonas sp. F0473]
Length = 368
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS +VMP + +++++V I +D+ + + RA G GGQ++NK +AVR+TH PTG+ V
Sbjct: 212 HTSFSACDVMPEI-DDAVEVDIHMDDVRVDYYRASGAGGQHINKTSSAVRMTHEPTGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL NK + L L+AKL + +E++ EI ++ G K EWG QIR+YVF PY
Sbjct: 271 QCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEEIAKLEGVQQKIEWGSQIRSYVFQPYT 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKDVRT ET ++ +VMDGE++PFI++YL K
Sbjct: 331 MVKDVRTNAETGNVQAVMDGEIDPFIRAYLNAK 363
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L+ + ++++++R S + E+++AELE K ++ +FWD+ A AQ+ + L D+K
Sbjct: 4 DLKPTLSDLGEKLDQMRISLEIPAKEEKIAELEYKMSEPTFWDDAAAAQKVNRELVDLKG 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ K +DA T+ ++ ++ D + ++ + + + L+ +L LLSG Y
Sbjct: 64 GVDTYKALAAKYEDAETLYEMG--IEENDPAMEDDIRAELDAIAAGLETLQLEVLLSGEY 121
Query: 126 DKEGAVISITAGAGGTDAQ 144
D A++++ AGAGGT+AQ
Sbjct: 122 DANNAILTLHAGAGGTEAQ 140
>gi|295134177|ref|YP_003584853.1| peptide chain release factor 2 [Zunongwangia profunda SM-A87]
gi|294982192|gb|ADF52657.1| peptide chain release factor 2 [Zunongwangia profunda SM-A87]
Length = 365
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ V PL+ +++++++I D+EI+ +R+ G GGQNVNKVET
Sbjct: 195 LVRISPFDSNAKRHTSFASVYVYPLV-DDTIEIEINPADIEITTARSSGAGGQNVNKVET 253
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
V++ H PTG+ + C+E RSQ N+ +A+ LK++L I E++ + + I K EW
Sbjct: 254 KVQLVHHPTGIQISCSETRSQHDNRNRAMQMLKSQLYEIELEKQREQREDIEASKKKIEW 313
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYV HPYKLVKDVRT ET ++ SVMDG ++ F+K+YL
Sbjct: 314 GSQIRNYVMHPYKLVKDVRTAEETGNVDSVMDGHIDQFLKAYL 356
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 72/136 (52%), Gaps = 10/136 (7%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
V+ + R++ ++ ++Q + E+ E K D SFWDN +EA+E ++ L K +N
Sbjct: 7 VKDITTRIDNLQVHLNIEQKQIEIQNEEEKTFDPSFWDNPSEAEEFMKTLKGKKKWVNDY 66
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALD---QFELTQLLSGPYDK 127
K+ +++ +++ E ++ E + +IK+ K LD + E +LS D
Sbjct: 67 NVAKSGLEELQVLLEFYNEGEA-------EESDVIKQYQKILDVVEELEFKNMLSEEGDD 119
Query: 128 EGAVISITAGAGGTDA 143
AV+ ITAGAGGT++
Sbjct: 120 LSAVLQITAGAGGTES 135
>gi|392403518|ref|YP_006440130.1| bacterial peptide chain release factor 2 (bRF-2) [Turneriella parva
DSM 21527]
gi|390611472|gb|AFM12624.1| bacterial peptide chain release factor 2 (bRF-2) [Turneriella parva
DSM 21527]
Length = 372
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 105/153 (68%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V P + ++ +++++ E+DL I RA G GGQ+VNK E+AVR+TH+PTGV V
Sbjct: 218 HTSFAAVHVSPEISDD-VEIEVLEKDLRIDVYRASGAGGQHVNKTESAVRMTHLPTGVVV 276
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQ+ N++ + LKA+L +A ++ +EI+ G+ WG QIR+YVFHPY
Sbjct: 277 SSQTQRSQIQNRLTCMKMLKARLYEMARAEKEAEIESRSGERKDISWGNQIRSYVFHPYS 336
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD+RTG ETS + +VMDG+ PFI ++L+ K
Sbjct: 337 MVKDLRTGEETSQVQNVMDGDFGPFIDAFLRNK 369
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
Query: 2 QDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFW--DNR-AEAQETLQ 58
Q ++ + A D+++ L+ +E EL +L K D + D+R E +E
Sbjct: 3 QSLKEVKGSLAALRDQIDARYTELNLKDVEAELGDLNKKMEDPRLFADDSRVGEVRELQT 62
Query: 59 ALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNK-------A 111
+ ++ KI+ K ++ DA+ ++ E +E A ++ EL +
Sbjct: 63 RIAVLERKISSWKALKAEIADALEYAEIAE---------MENAENMAAELEQRGTDARAT 113
Query: 112 LDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D+ +L LL+GP D A ++I GAGGT++Q
Sbjct: 114 FDKLDLESLLTGPDDMNNAFVNIHPGAGGTESQ 146
>gi|256390605|ref|YP_003112169.1| peptide chain release factor 2 [Catenulispora acidiphila DSM 44928]
gi|256356831|gb|ACU70328.1| peptide chain release factor 2 [Catenulispora acidiphila DSM 44928]
Length = 368
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 111/157 (70%), Gaps = 10/157 (6%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EV+P++ E+S V IPE++L + R+ G GGQ VN ++AVRITH+P+G+ V
Sbjct: 212 QTSFAGVEVVPVV-EQSDHVDIPEDELRVDVYRSSGPGGQGVNTTDSAVRITHLPSGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVK----AEWGQQIRNYVF 259
C ERSQ+ N+ A++ L+AKLL QR E +Q + DA+K WG Q+R+YV
Sbjct: 271 SCQNERSQIQNRASAMAVLQAKLL-----QRRREEEQAKMDALKDDSSGSWGNQMRSYVL 325
Query: 260 HPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
HPY+LVKD+RT +ET + +V+DG+++ FI++ ++++
Sbjct: 326 HPYQLVKDLRTNYETGNTTAVLDGDIDEFIEAGIRWR 362
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
I A L +L ++A+LE +A+ WD++A+AQ L+ ++ ++N + +++D
Sbjct: 19 IEAVLDLGKLRAQIADLEEQASAPDLWDDQAKAQAVTSKLSGLQAELNRFSTLNRRLEDI 78
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
+ +L + DA L E + +++KA+ + E+ LLSG YD A++++ A AGG
Sbjct: 79 EVLFELGQSEGDEDA--LAEVQGELVDVSKAVGELEVRTLLSGEYDAREALVTLRAEAGG 136
Query: 141 TDA 143
DA
Sbjct: 137 VDA 139
>gi|320530290|ref|ZP_08031358.1| peptide chain release factor 2 [Selenomonas artemidis F0399]
gi|320137433|gb|EFW29347.1| peptide chain release factor 2 [Selenomonas artemidis F0399]
Length = 368
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS +VMP + +++++V I +D+ + + RA G GGQ++NK +AVR+TH PTG+ V
Sbjct: 212 HTSFSACDVMPEI-DDAVEVDIDMDDVRVDYYRASGAGGQHINKTSSAVRMTHEPTGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL NK + L L+AKL + +E++ E+ ++ G K EWG QIR+YVF PY
Sbjct: 271 QCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEELAKLEGVQQKIEWGSQIRSYVFQPYT 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKDVRT ET ++ +VMDGE++PFI++YL K
Sbjct: 331 MVKDVRTNAETGNVQAVMDGEIDPFIRAYLNAK 363
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 79/140 (56%), Gaps = 4/140 (2%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L+ + ++++++R S + E+++AELE K ++ +FWD+ A AQ+ Q L +K
Sbjct: 4 DLKPTLNDLGEKLDQMRISLEIPAKEEKIAELEYKMSEPTFWDDAAAAQKVNQELAGLKG 63
Query: 66 KINLLTDFKTKMDDAVTIVKL-TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ K +DA T+ ++ EE D T G + I E L+ +L LLSG
Sbjct: 64 GVDTYKALAAKYEDAETLYEMGIEENDPTMEGDIRAELDAIAE---GLETLQLEVLLSGE 120
Query: 125 YDKEGAVISITAGAGGTDAQ 144
YD A++++ AGAGGT+AQ
Sbjct: 121 YDANNAILTLHAGAGGTEAQ 140
>gi|304437837|ref|ZP_07397786.1| peptide chain release factor RF2 [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304369194|gb|EFM22870.1| peptide chain release factor RF2 [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 368
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS +VMP + +++++V I +D+ + + RA G GGQ++NK +AVR+TH PTG+ V
Sbjct: 212 HTSFSACDVMPEI-DDAVEVPINMDDVRVDYYRASGAGGQHINKTSSAVRMTHEPTGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL NK + + L+AKL + +E++ EI ++ G K EWG QIR+YVF PY
Sbjct: 271 QCQNERSQLQNKEQCMKMLRAKLFELEQEKKEEEIAKLEGVQQKIEWGSQIRSYVFQPYT 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKDVRT ET ++ +VMDGEL+PFI++YL K
Sbjct: 331 MVKDVRTNAETGNVQAVMDGELDPFIRAYLNAK 363
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L+ + ++++++R S + E+++AELE K + SFWD+ A AQ+ Q L +K
Sbjct: 4 DLKPTLNDLGEKLDQMRISLEIPAKEEKIAELEYKMGEPSFWDDAAAAQKLNQELAALKG 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ K +DA T+ ++ ++ DA + ++ + + + + L+ +L LLSG Y
Sbjct: 64 GVDTYKGLMAKYEDAETLYEMG--IEEGDASMEDDIRAELDLIAEGLETLQLEVLLSGDY 121
Query: 126 DKEGAVISITAGAGGTDAQ 144
D A++++ AGAGGT+AQ
Sbjct: 122 DANDAILTLHAGAGGTEAQ 140
>gi|340621696|ref|YP_004740148.1| peptide chain release factor 2 [Capnocytophaga canimorsus Cc5]
gi|339901962|gb|AEK23041.1| Peptide chain release factor 2 [Capnocytophaga canimorsus Cc5]
Length = 315
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 106/150 (70%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL +++++++I D+ R+ G GGQNVNKVETAVR+ H PTG+ +
Sbjct: 156 HTSFASVYVYPL-ADDTIEIEINPADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIII 214
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+E RSQL NK KAL LK++L I ++R ++ +I +K EWG QIRNYV HPYK
Sbjct: 215 ENSETRSQLDNKNKALQLLKSQLYEIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYK 274
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRT +E++D+ SVM+GE++ F+K++L
Sbjct: 275 LVKDVRTSYESTDVDSVMNGEIDEFLKAFL 304
>gi|393201991|ref|YP_006463833.1| protein chain release factor B [Solibacillus silvestris StLB046]
gi|327441322|dbj|BAK17687.1| protein chain release factor B [Solibacillus silvestris StLB046]
Length = 328
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 108/155 (69%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP +E +++ I EDL++ RA G GGQ++N ++AVRITH+PTGV V
Sbjct: 174 HTSFVSCDVMPEFNDE-IEIDIRTEDLKVDTYRATGAGGQHINTTDSAVRITHLPTGVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ+ N+ A+ LK+KL + E++ +++ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 QCQSERSQIKNRDAAMKMLKSKLYQLEIEKQQAQLDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT ET ++ +VMDG+L+ FI +YL+ K S
Sbjct: 293 MVKDHRTSAETGNVGAVMDGDLDIFITAYLRSKIS 327
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ E +++FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 63 LAEFQTKMEEFELQMLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|313895325|ref|ZP_07828882.1| peptide chain release factor 2 [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312976220|gb|EFR41678.1| peptide chain release factor 2 [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 368
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS +VMP + +++++V I +D+ + + RA G GGQ++NK +AVR+TH PTG+ V
Sbjct: 212 HTSFSACDVMPEI-DDAVEVDIDMDDVRVDYYRASGAGGQHINKTSSAVRMTHEPTGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL NK + L L+AKL + +E++ E+ ++ G K EWG QIR+YVF PY
Sbjct: 271 QCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEELAKLEGVQQKIEWGSQIRSYVFQPYT 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKDVRT ET ++ +VMDGE++PFI++YL K
Sbjct: 331 MVKDVRTNAETGNVQAVMDGEIDPFIRAYLNAK 363
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L+ + ++++++R S + E+++AELE K ++ +FWD+ A AQ+ Q L +K
Sbjct: 4 DLKPTLNDLGEKLDQMRISLEIPAKEEKIAELEYKMSEPTFWDDAAAAQKVNQELAGLKG 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ K +DA T+ ++ ++ D + + + + + + L+ +L LLSG Y
Sbjct: 64 GVDTYKALAAKYEDAETLYEMG--IEENDPSMERDIRAELDLIAEGLETLQLEVLLSGEY 121
Query: 126 DKEGAVISITAGAGGTDAQ 144
D A++++ AGAGGT+AQ
Sbjct: 122 DANNAILTLHAGAGGTEAQ 140
>gi|337288092|ref|YP_004627564.1| hypothetical protein TOPB45_0534 [Thermodesulfobacterium sp. OPB45]
gi|334901830|gb|AEH22636.1| hypothetical protein TOPB45_0534 [Thermodesulfobacterium geofontis
OPF15]
Length = 378
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 108/163 (66%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
+I I+ + TSF+ V+P + EE ++V+I EDL+I RA G GGQ+VNK ET
Sbjct: 206 LIRISPFNANSKRHTSFASVTVIPQI-EEDIEVEIRPEDLKIETMRASGHGGQHVNKTET 264
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITHIPTG+TV C ERSQ NK+ AL L+++L + +++ S+ + + G+ + W
Sbjct: 265 AVRITHIPTGITVTCQNERSQYLNKMTALKILRSRLYQLEKQKLESKKESLIGEKKEISW 324
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIR Y HPYK+VKD RT +E+ + ++DGE++ FI+ YL
Sbjct: 325 GNQIRTYTLHPYKVVKDHRTQYESYKVEEILDGEIDDFIREYL 367
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L K ++ D++E++R Q+LE +L ++E + ++ WD++ + ++ LQ + +
Sbjct: 12 DLEKLIKNFEDKLEDLRGCLEPQKLETKLIKIEEELQNNKDWDSQ-KIKKLLQERAQIFE 70
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDA--GLLEEAASIIKELNKALDQFELTQLLSG 123
KI++L + + K + + L +E S D LLEE S K E LLSG
Sbjct: 71 KISILENLERKFKEILEWYSLYKEEKSFDILNTLLEELTS----FEKTFKTEETKLLLSG 126
Query: 124 PYDKEGAVISITAGAGGTDAQ 144
YD A++SI AG GGTDAQ
Sbjct: 127 EYDSSSAILSIHAGTGGTDAQ 147
>gi|269123112|ref|YP_003305689.1| peptide chain release factor 2 [Streptobacillus moniliformis DSM
12112]
gi|268314438|gb|ACZ00812.1| bacterial peptide chain release factor 2 (bRF- 2) [Streptobacillus
moniliformis DSM 12112]
Length = 362
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 106/166 (63%), Gaps = 1/166 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ V+P + E+ ++V + +EDL+I RA G GGQ+VN ++
Sbjct: 198 LVRISPFDSNARRHTSFAAVNVIPEI-EDDVEVNLKKEDLKIDTYRASGAGGQHVNTTDS 256
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITHIPTG+ V C ERSQ N A+ L+AKL I + R +EI ++G K EW
Sbjct: 257 AVRITHIPTGIVVICQNERSQNKNLNSAMKVLRAKLFEIELKNRENEINDLKGVQSKIEW 316
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
G QIR+YVF PYK+VKD RT HE +++ VMDG++ FI YLK +
Sbjct: 317 GSQIRSYVFQPYKMVKDHRTNHEENNVDKVMDGDINIFIDEYLKIR 362
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 59/98 (60%), Gaps = 4/98 (4%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
F+ ++ ++Q L+ ++ +K++I ++ T ++ +++ ++ + + L E I
Sbjct: 45 FYKDQNKSQNVLKEISLLKERIKDISKLLTLNENIQILLEFYKQEEISLEELETETLEFI 104
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
KEL D+F++ LL+G YDK A+++I AGAGGT++
Sbjct: 105 KEL----DKFKIKLLLNGKYDKNSAILTINAGAGGTES 138
>gi|406600644|ref|YP_006745990.1| peptide chain release factor 2 [Leuconostoc gelidum JB7]
gi|406372179|gb|AFS41104.1| peptide chain release factor 2 [Leuconostoc gelidum JB7]
Length = 333
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 109/156 (69%), Gaps = 1/156 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++++DV+I ++D+++ R+GG GGQNVNKV T VR+TH PTG+ V
Sbjct: 175 HTSFVSVDVMPEL-DDTIDVEIRDDDVKMDVFRSGGAGGQNVNKVSTGVRLTHEPTGIVV 233
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T ER+Q N+ A+ LK KL + E++ +E + GD ++ WG QIR+YV HPY+
Sbjct: 234 SSTVERTQYGNRDYAMRLLKGKLYQLELEKQEAERAALTGDKLENGWGSQIRSYVLHPYQ 293
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSM 299
+VKD RT +ET+ V+DG+L+PFI +YL+++ S+
Sbjct: 294 MVKDHRTDYETNQPQQVLDGDLDPFINAYLQWQLSL 329
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+S FWD+ +AQ+ ++ +K++ + + + ++ ++++ E D TD+ ++ E
Sbjct: 2 TESGFWDDNVKAQKIIEENNVLKNRRDSFLNLTNQAEEIDLLIEMLSE-DVTDSEMMTEL 60
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
I + K ++ + L QLL+ PYD A++ + G+GGT++
Sbjct: 61 EESIAKAQKDIETYNLEQLLTEPYDANNAILEVHPGSGGTES 102
>gi|402303929|ref|ZP_10823011.1| peptide chain release factor 2 [Selenomonas sp. FOBRC9]
gi|400376998|gb|EJP29884.1| peptide chain release factor 2 [Selenomonas sp. FOBRC9]
Length = 368
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS +VMP + +++++V I +D+ + + RA G GGQ++NK +AVR+TH PTG+ V
Sbjct: 212 HTSFSACDVMPEI-DDAVEVDIDMDDVRVDYYRASGAGGQHINKTSSAVRMTHEPTGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL NK + L L+AKL + +E++ E+ ++ G K EWG QIR+YVF PY
Sbjct: 271 QCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEELAKLEGVQQKIEWGSQIRSYVFQPYT 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKDVRT ET ++ +VMDGE++PFI++YL K
Sbjct: 331 MVKDVRTNAETGNVQAVMDGEIDPFIRAYLNAK 363
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 80/140 (57%), Gaps = 4/140 (2%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L+ + ++++++R S + E+++AELE K ++ +FWD+ A AQ+ Q L +K
Sbjct: 4 DLKPTLNDLGEKLDQMRISLEIPAKEEKIAELEYKMSEPTFWDDAAAAQKVNQELAGLKG 63
Query: 66 KINLLTDFKTKMDDAVTIVKL-TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ K +DA T+ ++ EE D + G + +I E L+ +L LLSG
Sbjct: 64 GVDTYKALAAKYEDAETLYEMGIEENDPSMEGDIRAELDLIAE---GLETLQLEVLLSGE 120
Query: 125 YDKEGAVISITAGAGGTDAQ 144
YD A++++ AGAGGT+AQ
Sbjct: 121 YDANNAILTLHAGAGGTEAQ 140
>gi|261420549|ref|YP_003254231.1| hypothetical protein GYMC61_3194 [Geobacillus sp. Y412MC61]
gi|297531361|ref|YP_003672636.1| hypothetical protein GC56T3_3133 [Geobacillus sp. C56-T3]
gi|319768218|ref|YP_004133719.1| hypothetical protein [Geobacillus sp. Y412MC52]
gi|261377006|gb|ACX79749.1| hypothetical protein GYMC61_3194 [Geobacillus sp. Y412MC61]
gi|297254613|gb|ADI28059.1| hypothetical protein GC56T3_3133 [Geobacillus sp. C56-T3]
gi|317113084|gb|ADU95576.1| hypothetical protein GYMC52_3223 [Geobacillus sp. Y412MC52]
Length = 367
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P L +++++++I E+L+I R+ G GGQ+VN ++AVRITH+PTG+ V
Sbjct: 214 HTSFVSCEVVPEL-DDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ KA++ LKAKL E++ +E+ ++RG+ + WG QIR+YVFHPY
Sbjct: 273 TCQSERSQIKNREKAMNMLKAKLYQKKLEEQQAELAELRGEQKEIGWGNQIRSYVFHPYS 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RT E ++ +VMDGE++ FI +YL+ K
Sbjct: 333 LVKDHRTNVEVGNVQAVMDGEIDVFIDAYLRAK 365
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 82/146 (56%), Gaps = 6/146 (4%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M D +++++E + R+ EIR S L+ + + ELE + A +FWD++ AQ + +
Sbjct: 1 MIDLVEIKQELEKMAKRLAEIRGSLDLEAKQARIRELEEQMAAPNFWDDQKAAQAVISEV 60
Query: 61 TDVKDKINLLTDFKTKMDD-AVTIVKLTEEM-DSTDAGLLEEAASIIKELNKALDQFELT 118
+KD + + + + D+ VT L EE D A L+EEA K+L K +FEL
Sbjct: 61 NALKDLVEEFSSLEERFDNLEVTYELLKEEPDDELQAELVEEA----KKLMKDFSEFELQ 116
Query: 119 QLLSGPYDKEGAVISITAGAGGTDAQ 144
LL+ PYD+ A++ + GAGGT++Q
Sbjct: 117 LLLNEPYDQNNAILELHPGAGGTESQ 142
>gi|395244794|ref|ZP_10421748.1| Peptide chain release factor 2 [Lactobacillus hominis CRBIP 24.179]
gi|394483000|emb|CCI82756.1| Peptide chain release factor 2 [Lactobacillus hominis CRBIP 24.179]
Length = 332
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 108/157 (68%), Gaps = 1/157 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P + ++S+ + I +DL I R+ G GGQ++NK +AVRITH+PTG+
Sbjct: 174 HTSFASVEVIPEI-DQSIKIDINPDDLRIDVYRSSGAGGQHINKTSSAVRITHLPTGIVT 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ A++ L+AKL + EE++ + + ++GD + +G QIR+YVFHPY
Sbjct: 233 ASQAQRSQLQNRETAMNMLRAKLFQLEEEKKRKQTQALKGDQMDIGFGSQIRSYVFHPYN 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 300
+VKD RT ETSD+ VMDG+++ FI +YL++K S S
Sbjct: 293 MVKDHRTNFETSDVNGVMDGKIDDFIYAYLQWKLSQS 329
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FWD++ AQ + +K+K DA + L + D L E
Sbjct: 2 AEPDFWDDQEAAQNLIAQTNQMKEKSEKFQKLNNDFQDAQVALDLLKS--DPDQDLQTEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+ + EL+K+ ++EL LLS YD+ A++ I GAGGT+A
Sbjct: 60 SDQMIELSKSFHEYELNLLLSDKYDQHNALMEIHPGAGGTEA 101
>gi|308071079|ref|YP_003872684.1| peptide chain release factor 2 [Paenibacillus polymyxa E681]
gi|305860358|gb|ADM72146.1| Peptide chain release factor 2 (RF-2) [Paenibacillus polymyxa E681]
Length = 331
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +V+P + ++ +DV+I EDL+I RA G GGQ++N ++AVRITH+P+G+ V
Sbjct: 174 HTSFVSCDVVPEIADD-VDVEIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPSGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A++ L++KL E++ ++ +IRG+ WG QIR+YVFHPY
Sbjct: 233 TCQNERSQIKNREQAMTMLRSKLYERKIEEQRQQLDEIRGEQSDIAWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDG+L+PFI YL+
Sbjct: 293 MVKDHRTSVETGNVGAVMDGDLDPFIDGYLR 323
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT-EEMDSTDAGL 97
M A D FWD+ +AQ + + VK ++ + + +DA + +L EE D T AG
Sbjct: 1 MAAPD--FWDDNDKAQAVIAEMNAVKSSVDSYEQLRLEYEDAGMMAELADEEGDETLAGE 58
Query: 98 LEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+E + I+ L L +FEL LL+ PYDK A++ + GAGGT++Q
Sbjct: 59 IENS---IRSLLSKLQEFELQLLLNQPYDKLNAILELHPGAGGTESQ 102
>gi|291087933|ref|ZP_06347924.2| peptide chain release factor 2 [Clostridium sp. M62/1]
gi|291073455|gb|EFE10819.1| peptide chain release factor 2 [Clostridium sp. M62/1]
Length = 343
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF +VMP + E+ +DV+I ++L I R+ G GGQ++NK +A+RITH+PTG+ V
Sbjct: 184 QTSFVSCDVMPDIKED-LDVEINPDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVV 242
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK A+ LK KL ++ +E+ A ++ IRGD +G QIR+YV PY
Sbjct: 243 QCQNERSQFQNKEVAMQMLKTKLYMLKQEEHAEKLSDIRGDVKDINFGNQIRSYVMQPYT 302
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
LVKD RTG E+ ++ +V+DG+++ FI +YLK+
Sbjct: 303 LVKDHRTGAESGNVNAVLDGDIDLFISAYLKW 334
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Query: 32 KELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMD 91
K + EL+ + FWD+ + ++ ++KD + + + +D ++++ E
Sbjct: 2 KRIDELDKSMEEPGFWDDPEMSTRLMREAKNLKDTVESYRKLEQEYEDIQVMLEMGYE-- 59
Query: 92 STDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
D L+ E ++ + + L+ + LLSG YD A++ + AGAGGT+A
Sbjct: 60 ENDPSLIPEIQGMMDDFVEKLEAIRIQTLLSGEYDNNNAILKLNAGAGGTEA 111
>gi|386821354|ref|ZP_10108570.1| peptide chain release factor 2 [Joostella marina DSM 19592]
gi|386426460|gb|EIJ40290.1| peptide chain release factor 2 [Joostella marina DSM 19592]
Length = 364
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 102/150 (68%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL ++S+++ I D+ F+R+ G GGQNVNKVET +TH PTG+ +
Sbjct: 208 HTSFASVYVYPL-ADDSIEIDINPADISWDFARSSGAGGQNVNKVETKAILTHHPTGIII 266
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+E RSQL N+ KA+ LK++L I ++R + +I +K EWG QIRNYV HPYK
Sbjct: 267 HNSETRSQLENREKAMQMLKSQLYEIELKKRQAARDEIESSKMKIEWGSQIRNYVMHPYK 326
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRT HET ++ +VMDG ++ F+K+YL
Sbjct: 327 LVKDVRTAHETGNVDAVMDGNIDEFLKAYL 356
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 10/160 (6%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
V+ ++R +++ ++Q E+ E K FWD EA+ ++AL K +
Sbjct: 7 VKNLAERTADLKGYLNIEQKLIEIQNEEEKTFAPDFWDKPKEAEAIMRALRTQKKWVEDY 66
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGL---LEEAASIIKELNKALDQFELTQLLSGPYDK 127
T + + + + +E ++T+ + E+A S+I+ + E +LS D
Sbjct: 67 NKANTLVTELDVLFEFYKEGEATEEDIVTQFEKAKSLIEGM-------EFKNMLSEEGDS 119
Query: 128 EGAVISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPE 167
AV+ ITAGAGGT++ S M L+ E +I E
Sbjct: 120 MSAVLQITAGAGGTESCDWASMLMRMYLMWGEKNGYKIKE 159
>gi|283783522|ref|YP_003374276.1| peptide chain release factor 2 [Gardnerella vaginalis 409-05]
gi|283441040|gb|ADB13506.1| peptide chain release factor 2 [Gardnerella vaginalis 409-05]
Length = 378
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 114/160 (71%), Gaps = 2/160 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QT FS EV+PL+ E + + IP+ D+ + +A G GGQ VN +AVRITH+PTG+ V
Sbjct: 213 QTGFSAVEVIPLV-EATDHIDIPDSDIRVDTFQASGPGGQGVNTTYSAVRITHLPTGLVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ERSQ+ N+ A++ L+++LLV+ + A++ K++ GD +KA WG Q+R+YV HPY+
Sbjct: 272 SMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGD-IKASWGDQMRSYVLHPYQ 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 303
+VKD+RTG+ETS +V DG+++ FI++ +++++ ++A
Sbjct: 331 MVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWRHEQRVAA 370
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF DVEA + I + + L+ +A+LE +AA+ WD+ AQ+ L+
Sbjct: 5 DFSQALNDVEA---KYSSISKALDVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ ++ L +++D T+++L +E DA + EA + + LD E+ LL
Sbjct: 62 AQSQLKRLQAVDQRIEDTKTLIELGQE--EGDADSMSEAQEELGNIAHELDDMEVQTLLD 119
Query: 123 GPYDKEGAVISITAGAGGTDA 143
G YD AV++I +GAGG DA
Sbjct: 120 GEYDARSAVVTIRSGAGGVDA 140
>gi|333445914|ref|ZP_08480856.1| peptide chain release factor 2 [Leuconostoc inhae KCTC 3774]
Length = 380
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 109/156 (69%), Gaps = 1/156 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++++D++I ++D+++ R+GG GGQNVNKV T VR+TH PTG+ V
Sbjct: 214 HTSFVSVDVMPEL-DDTIDIEIRDDDVKMDVFRSGGAGGQNVNKVSTGVRLTHEPTGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T ER+Q N+ A+ LK KL + E++ +E + GD ++ WG QIR+YV HPY+
Sbjct: 273 SSTVERTQYGNRDYAMRLLKGKLYQLELEKQEAERAALTGDKLENGWGSQIRSYVLHPYQ 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSM 299
+VKD RT +ET+ V+DG+L+PFI +YL+++ S+
Sbjct: 333 MVKDHRTDYETNQPQQVLDGDLDPFINAYLQWQLSL 368
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 77/129 (59%), Gaps = 3/129 (2%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
+ + RA+ L+ L +E+A+ E + +S FWD+ +AQ+ ++ +K++ + + +
Sbjct: 15 ENIARFRATLDLEALTEEIADFENRMTESGFWDDNVKAQKIIEENNVLKNRRDSFLNLTS 74
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEE-AASIIKELNKALDQFELTQLLSGPYDKEGAVISI 134
+ ++ ++++ E D TD+ ++ E SI+K L K ++ + L QLL+ PYD A++ +
Sbjct: 75 QAEEIDLLIEMLSE-DVTDSEMMSELEESIVKAL-KDIETYNLEQLLTEPYDANNAILEV 132
Query: 135 TAGAGGTDA 143
G+GGT++
Sbjct: 133 HPGSGGTES 141
>gi|56421641|ref|YP_148959.1| peptide chain release factor 2 [Geobacillus kaustophilus HTA426]
gi|56381483|dbj|BAD77391.1| peptide chain release factor 2 in translation [Geobacillus
kaustophilus HTA426]
Length = 327
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P L +++++++I E+L+I R+ G GGQ+VN ++AVRITH+PTG+ V
Sbjct: 174 HTSFVSCEVVPEL-DDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ KA++ LKAKL E++ +E+ ++RG+ + WG QIR+YVFHPY
Sbjct: 233 TCQSERSQIKNREKAMNMLKAKLYQKKLEEQQAELAELRGEQKEIGWGNQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RT E ++ +VMDGE++ FI +YL+ K
Sbjct: 293 LVKDHRTNVEVGNVQAVMDGEIDVFIDAYLRAK 325
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDD-AVTIVKLTEEMD-STDAGLLE 99
A +FWD++ AQ + +KD + + + + D+ VT L EE D A L+E
Sbjct: 2 AAPNFWDDQKSAQAVISEANALKDLVEEFSSLEERFDNLEVTYELLKEEPDDELQAELVE 61
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EA K+L K +FEL LL+ PYD+ A++ + GAGGT++Q
Sbjct: 62 EA----KKLMKDFSEFELQLLLNEPYDQNNAILELHPGAGGTESQ 102
>gi|415720929|ref|ZP_11468173.1| peptide chain release factor 2 [Gardnerella vaginalis 00703Bmash]
gi|388061190|gb|EIK83847.1| peptide chain release factor 2 [Gardnerella vaginalis 00703Bmash]
Length = 373
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 114/160 (71%), Gaps = 2/160 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QT FS EV+PL+ E + + IP+ D+ + +A G GGQ VN +AVRITH+PTG+ V
Sbjct: 213 QTGFSAVEVIPLV-EATDHIDIPDSDIRVDTFQASGPGGQGVNTTYSAVRITHLPTGLVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ERSQ+ N+ A++ L+++LLV+ + A++ K++ GD +KA WG Q+R+YV HPY+
Sbjct: 272 SMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGD-IKASWGDQMRSYVLHPYQ 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 303
+VKD+RTG+ETS +V DG+++ FI++ +++++ ++A
Sbjct: 331 MVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWRHEQRVAA 370
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF DVEA + I + + L+ +A+LE +AA WD+ AQ+ L+
Sbjct: 5 DFAQALNDVEA---KYSSISKAIDIDSLKSTIADLEKQAAQPGLWDDSEHAQQVTSKLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ ++ L +++DA T+++L +E DA + EA + + LD E+ LL
Sbjct: 62 AQSQLKRLQAVDQRIEDAKTLIELGQE--EGDADSMSEAQEELGAIAHELDDMEVQTLLD 119
Query: 123 GPYDKEGAVISITAGAGGTDA 143
G YD AV++I +GAGG DA
Sbjct: 120 GEYDARAAVVTIRSGAGGVDA 140
>gi|297243831|ref|ZP_06927761.1| protein chain release factor B [Gardnerella vaginalis AMD]
gi|415708622|ref|ZP_11462636.1| peptide chain release factor 2 [Gardnerella vaginalis 6420LIT]
gi|415710294|ref|ZP_11463683.1| peptide chain release factor 2 [Gardnerella vaginalis 6420B]
gi|296888252|gb|EFH26994.1| protein chain release factor B [Gardnerella vaginalis AMD]
gi|388054521|gb|EIK77459.1| peptide chain release factor 2 [Gardnerella vaginalis 6420LIT]
gi|388055534|gb|EIK78435.1| peptide chain release factor 2 [Gardnerella vaginalis 6420B]
Length = 378
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 114/160 (71%), Gaps = 2/160 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QT FS EV+PL+ E + + IP+ D+ + +A G GGQ VN +AVRITH+PTG+ V
Sbjct: 213 QTGFSAVEVIPLV-EATDHIDIPDSDIRVDTFQASGPGGQGVNTTYSAVRITHLPTGLVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ERSQ+ N+ A++ L+++LLV+ + A++ K++ GD +KA WG Q+R+YV HPY+
Sbjct: 272 SMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGD-IKASWGDQMRSYVLHPYQ 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 303
+VKD+RTG+ETS +V DG+++ FI++ +++++ ++A
Sbjct: 331 MVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWRHEQRVAA 370
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF DVEA + I + + L+ +A+LE +AA+ WD+ AQ+ L+
Sbjct: 5 DFSQALNDVEA---KYSLISKALDVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ ++ L + +++D T+++L EE DA + EA + + LD E+ LL
Sbjct: 62 AQSQLKRLQAVEQRIEDTKTLIELGEE--EGDADSMNEAQEELGNIAHELDDMEVQTLLD 119
Query: 123 GPYDKEGAVISITAGAGGTDA 143
G YD AV++I +GAGG DA
Sbjct: 120 GEYDARSAVVTIRSGAGGVDA 140
>gi|225175296|ref|ZP_03729291.1| peptide chain release factor 2 [Dethiobacter alkaliphilus AHT 1]
gi|225169048|gb|EEG77847.1| peptide chain release factor 2 [Dethiobacter alkaliphilus AHT 1]
Length = 288
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 104/151 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + E ++I +DL+I RA G GGQ+VN ++AVRITHIPTG V
Sbjct: 131 HTSFASLDVLPEVEEGDSGIEISPDDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGTVV 190
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ +N+ +A+ LKA+L + + Q+A E+ +RG+ + WG QIR+YVF PY
Sbjct: 191 QCQNERSQHSNRDRAMKILKARLADLYQRQQAEELSNLRGEQKEIAWGSQIRSYVFQPYT 250
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RTG E +I +VMDG+L+ I+SYL+
Sbjct: 251 MVKDHRTGVEVGNINAVMDGDLDELIESYLR 281
>gi|295092740|emb|CBK78847.1| bacterial peptide chain release factor 2 (bRF-2) [Clostridium cf.
saccharolyticum K10]
Length = 333
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF +VMP + E+ +DV+I ++L I R+ G GGQ++NK +A+RITH+PTG+ V
Sbjct: 174 QTSFVSCDVMPDIKED-LDVEINPDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK A+ LK KL ++ +E+ A ++ IRGD +G QIR+YV PY
Sbjct: 233 QCQNERSQFQNKEVAMQMLKTKLYMMKQEEHAEKLSDIRGDVKDINFGNQIRSYVMQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
LVKD RTG E+ ++ +V+DG+++ FI +YLK+
Sbjct: 293 LVKDHRTGAESGNVNAVLDGDIDLFISAYLKW 324
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ + + ++ ++KD + + + +D ++++ E D L+ E ++
Sbjct: 6 FWDDPETSTKLMREAKNLKDTVENYRKLEQEYEDIQVMLEMGYE--ENDPSLIPEIQGMM 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+ L+ + LLSG YD A++ + AGAGGT+A
Sbjct: 64 DDFVAKLEAIRIQTLLSGEYDNNNAILKLNAGAGGTEA 101
>gi|390935721|ref|YP_006393226.1| Peptide chain release factor 2 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389571222|gb|AFK87627.1| Peptide chain release factor 2 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 327
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 109/155 (70%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P + ++ + V I EDL+I R+ G GGQ+VNK E+A+RITH+PTG+ V
Sbjct: 174 HTSFALVEVLPEI-DDDIKVDIRPEDLKIDTYRSSGAGGQHVNKTESAIRITHLPTGIIV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ+ N+ A+ LKAKL+ + +++ +I+ ++G+ +A WG QIR+YVF PY
Sbjct: 233 QCQTERSQMQNRETAMKMLKAKLMDMMIKEQKEKIEDLKGEHKEAGWGNQIRSYVFQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKD RT E ++ +VMDGE++ FI +YLK K S
Sbjct: 293 LVKDHRTNFEVGNVNAVMDGEIDDFINAYLKQKVS 327
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
++ FW + ++QE + D+K+ I+ + + +D T+++L ++ D L +E
Sbjct: 2 SEPDFWSDLEKSQELSKKQKDLKEIISEYEALEKQWEDLHTLIELG--LEEGDESLSQEV 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
K L+K ++ ++ LLSGPYDK A++SI AGAGGT+AQ
Sbjct: 60 HDEYKALSKKVNDMKIKTLLSGPYDKNNAILSIHAGAGGTEAQ 102
>gi|383755047|ref|YP_005433950.1| putative peptide chain release factor 2 [Selenomonas ruminantium
subsp. lactilytica TAM6421]
gi|381367099|dbj|BAL83927.1| putative peptide chain release factor 2 [Selenomonas ruminantium
subsp. lactilytica TAM6421]
Length = 368
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 106/153 (69%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS ++MP + +++++V I D+ + RA G GGQ++NK +AVR+TH PTG+ V
Sbjct: 212 HTSFSACDIMPEI-DDAVEVDINMADVRVDTYRASGAGGQHINKTSSAVRMTHEPTGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL N+ + + L+AKL + E++ +E+ ++ GD EWG QIR+YVF PY
Sbjct: 271 QCQNERSQLQNREQCMKMLRAKLFELEMEKKEAELAKLEGDQQNIEWGSQIRSYVFQPYT 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT ET ++ +VMDG+++PFI+++L K
Sbjct: 331 MVKDHRTSQETGNVQAVMDGDIDPFIRAFLAAK 363
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 70/114 (61%), Gaps = 2/114 (1%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
E+++AELE K + +FWD+ AQ+ Q L D+K ++ K +DA T++++ E
Sbjct: 29 EEKIAELEYKMGEPTFWDDAEAAQKLNQELADLKSGVDKYKSLVAKHEDAETLLEMGLEE 88
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D D + ++ + + E+ + L+ +L LLSGPYD A++++ AGAGGT+AQ
Sbjct: 89 D--DPSMEDDVKAELDEVAEGLEALQLEVLLSGPYDANNAILTLHAGAGGTEAQ 140
>gi|415724069|ref|ZP_11469756.1| peptide chain release factor 2 [Gardnerella vaginalis 00703C2mash]
gi|388063003|gb|EIK85601.1| peptide chain release factor 2 [Gardnerella vaginalis 00703C2mash]
Length = 373
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 114/160 (71%), Gaps = 2/160 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QT FS EV+PL+ E + + IP+ D+ + +A G GGQ VN +AVRITH+PTG+ V
Sbjct: 213 QTGFSAVEVIPLV-EATDHIDIPDSDIRVDTFQASGPGGQGVNTTYSAVRITHLPTGLVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ERSQ+ N+ A++ L+++LLV+ + A++ K++ GD +KA WG Q+R+YV HPY+
Sbjct: 272 SMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGD-IKASWGDQMRSYVLHPYQ 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 303
+VKD+RTG+ETS +V DG+++ FI++ +++++ ++A
Sbjct: 331 MVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWRHEQRVAA 370
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF DVEA + I + + L+ +A+LE +AA+ WD+ AQ+ L+
Sbjct: 5 DFAQALNDVEA---KYSSISKAIDIDSLKSTIADLEKQAAEPGLWDDSEHAQQVTSKLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ ++ L + ++D T+++L +E DA + EA + + LD E+ LL
Sbjct: 62 AQSQLKRLQAVEQSIEDTKTLIELGQE--EGDADSMSEAQEELGAIAHELDDMEVQTLLD 119
Query: 123 GPYDKEGAVISITAGAGGTDA 143
G YD AV++I +GAGG DA
Sbjct: 120 GEYDARSAVVTIRSGAGGVDA 140
>gi|298252599|ref|ZP_06976393.1| protein chain release factor B [Gardnerella vaginalis 5-1]
gi|297532963|gb|EFH71847.1| protein chain release factor B [Gardnerella vaginalis 5-1]
Length = 378
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 114/160 (71%), Gaps = 2/160 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QT FS EV+PL+ E + + IP+ D+ + +A G GGQ VN +AVRITH+PTG+ V
Sbjct: 213 QTGFSAVEVIPLV-EATDHIDIPDSDIRVDTFQASGPGGQGVNTTYSAVRITHLPTGLVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ERSQ+ N+ A++ L+++LLV+ + A++ K++ GD +KA WG Q+R+YV HPY+
Sbjct: 272 SMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGD-IKASWGDQMRSYVLHPYQ 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 303
+VKD+RTG+ETS +V DG+++ FI++ +++++ ++A
Sbjct: 331 MVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWRHEQRVAA 370
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF + DVEA + I + + L+ +A+LE +AA+ WD+ AQ+ L+
Sbjct: 5 DFSQVLNDVEA---KYSSISKALDVDSLKVTIADLEKQAAEPGLWDDSEHAQQVTSKLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ ++ L +++D T+++L +E DA + EA + + LD E+ LL
Sbjct: 62 AQSQLKRLQAVDQRIEDTKTLIELGQE--EGDADSMSEAQEELGNIAHELDDMEVQTLLD 119
Query: 123 GPYDKEGAVISITAGAGGTDA 143
G YD AV++I +GAGG DA
Sbjct: 120 GEYDARSAVVTIRSGAGGVDA 140
>gi|347549812|ref|YP_004856140.1| putative peptide chain release factor 2 [Listeria ivanovii subsp.
ivanovii PAM 55]
gi|346982883|emb|CBW86917.1| Putative peptide chain release factor 2 [Listeria ivanovii subsp.
ivanovii PAM 55]
Length = 338
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++ +++++ +DL+I RA G GGQ++N ++AVR+THIP+G+ V
Sbjct: 185 HTSFVSVDVMPEL-DDDIEIEVRPDDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVV 243
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQL N+ +A+ LK KL +E++ E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 244 TCQSERSQLKNRDQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYS 303
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT HET +I +VMDG+L+ FI +YL+
Sbjct: 304 MVKDHRTNHETGNIQAVMDGDLDDFINAYLR 334
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E +AELE + D +FW+++ AQ+ + K+ + + + ++L +E
Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D L E I +++FEL +LS PYDK A++ + GAGGT++Q
Sbjct: 61 --EADEDLQAELEKDITAYMATINEFELKLMLSDPYDKNNAILELHPGAGGTESQ 113
>gi|308235215|ref|ZP_07665952.1| peptide chain release factor 2 [Gardnerella vaginalis ATCC 14018 =
JCM 11026]
gi|311114816|ref|YP_003986037.1| peptide chain release factor RF2 [Gardnerella vaginalis ATCC 14019]
gi|415711540|ref|ZP_11464277.1| peptide chain release factor 2 [Gardnerella vaginalis 55152]
gi|417556586|ref|ZP_12207643.1| peptide chain release factor 2 [Gardnerella vaginalis 315-A]
gi|310946310|gb|ADP39014.1| peptide chain release factor RF2 [Gardnerella vaginalis ATCC 14019]
gi|333602274|gb|EGL13704.1| peptide chain release factor 2 [Gardnerella vaginalis 315-A]
gi|388058374|gb|EIK81171.1| peptide chain release factor 2 [Gardnerella vaginalis 55152]
Length = 380
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 114/160 (71%), Gaps = 2/160 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QT FS EV+PL+ E + + IP+ D+ + +A G GGQ VN +AVRITH+PTG+ V
Sbjct: 213 QTGFSAVEVIPLV-EATDHIDIPDSDIRVDTFQASGPGGQGVNTTYSAVRITHLPTGLVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ERSQ+ N+ A++ L+++LLV+ + A++ K++ GD +KA WG Q+R+YV HPY+
Sbjct: 272 SMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGD-IKASWGDQMRSYVLHPYQ 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 303
+VKD+RTG+ETS +V DG+++ FI++ +++++ ++A
Sbjct: 331 MVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWRHEQRVAA 370
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF DVEA + I + + L+ +A+LE +A++ WD+ AQ+ L+
Sbjct: 5 DFAQALNDVEA---KYSLISKALDVNSLKTAIADLEKQASEPGLWDDSDHAQQVTSKLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ ++ L + +++D T+++L +E + D+ + EA + + LD E+ LL
Sbjct: 62 AQSQLKRLQAVEQRIEDTKTLIELGQEEEDADS--MSEAQEELGSIAHELDDMEVQTLLD 119
Query: 123 GPYDKEGAVISITAGAGGTDA 143
G YD AV++I +GAGG DA
Sbjct: 120 GEYDARAAVVTIRSGAGGVDA 140
>gi|406944423|gb|EKD76199.1| hypothetical protein ACD_43C00196G0003 [uncultured bacterium]
Length = 372
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 105/151 (69%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P L E + V I +EDL I R+GG GGQ+VN ++AVRITH+PT + V
Sbjct: 211 QTSFALIEVLPELGELN-PVVIKDEDLRIDVFRSGGHGGQSVNTTDSAVRITHLPTNIVV 269
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NKI A+ L+AKL + E +E ++RG+ AEWG QIR+YV HPYK
Sbjct: 270 QCQNERSQHQNKIIAMKILRAKLHKLQLEAEQAEKLKLRGEFTSAEWGNQIRSYVLHPYK 329
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT E SD +V+DG+L+ FI++YL+
Sbjct: 330 MVKDHRTDFEVSDPQAVLDGKLDGFIEAYLR 360
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 70/137 (51%), Gaps = 5/137 (3%)
Query: 11 VEAASD---RVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI 67
+E+A D R+ I + ++ + LE + A+ FW+N AQ + + D++++I
Sbjct: 5 IESAKDLRQRINIIGQQLNVSGMQAKQHALETEMAEPDFWNNTKHAQTVSKEVNDLREEI 64
Query: 68 NLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDK 127
+ + + ++D + + +L + DAG+ + +N+ + E L +G YD
Sbjct: 65 STWENLRHELDSIIELAQLNR--TAGDAGMAIDLEQQFAAVNQKFSELEFHLLFNGQYDA 122
Query: 128 EGAVISITAGAGGTDAQ 144
AV++I AGAGG DAQ
Sbjct: 123 SPAVVAIHAGAGGVDAQ 139
>gi|359690548|ref|ZP_09260549.1| peptide chain release factor 2 [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418750004|ref|ZP_13306291.1| peptide chain release factor 2 [Leptospira licerasiae str. MMD4847]
gi|418759704|ref|ZP_13315883.1| peptide chain release factor 2 [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|384113456|gb|EID99721.1| peptide chain release factor 2 [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|404274158|gb|EJZ41477.1| peptide chain release factor 2 [Leptospira licerasiae str. MMD4847]
Length = 367
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 107/164 (65%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF V P L ++ +++QI ++D+ + R+ G GGQ+VN ++
Sbjct: 203 LVRISPFDANKRRHTSFVSVHVSPEL-DDDINIQIEDKDIRVDVYRSSGAGGQHVNTTDS 261
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITHIP+G+ V C ERSQ+ N+ A LKA+L + +E+ ++++ G+ W
Sbjct: 262 AVRITHIPSGIVVACQNERSQIKNRDTAFKMLKARLYELEQERLKDDLEKKSGEKKDIAW 321
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIR+YVFHPY +VKD RT HET ++ +VMDG++EPFI +YLK
Sbjct: 322 GSQIRSYVFHPYNMVKDHRTDHETGNVQAVMDGDIEPFIMAYLK 365
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Query: 26 GLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVK 85
L + + +L + A+ SFWDN +A+ Q T+++ K+ + + + D +V+
Sbjct: 28 NLDKDQDQLKSYNDRIAEPSFWDNPDQAKSISQRKTELERKLEPWVNIRRDILDFPDLVE 87
Query: 86 LTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
LT E D ++E +S + L ++ EL L+ P D + A ++I GAGGT++Q
Sbjct: 88 LTFEEKGEDG--VDELSSEYQRLKSEFERLELLGALNEPEDMKPAFLNIHPGAGGTESQ 144
>gi|339448618|ref|ZP_08652174.1| peptide chain release factor 2 [Lactobacillus fructivorans KCTC
3543]
Length = 332
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 104/152 (68%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L +E++ V I EDL + R+ G GGQ++NK +AVRITH+PTG+
Sbjct: 174 HTSFASVDVMPEL-DETVSVDINPEDLRVDVFRSSGAGGQHINKTSSAVRITHLPTGIVT 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N++ A++ LK+KL +E++ +E +I G + WG QIR+YVFHPY
Sbjct: 233 SSQAQRSQLQNRVTAMNMLKSKLYEREQEKKEAEKAKIEGKQLDIGWGSQIRSYVFHPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
+VKD RT +ET + +VMDG+L PFI +YL++
Sbjct: 293 MVKDHRTNYETGNGQAVMDGDLNPFINAYLQW 324
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD++ +AQ+ + +K K + K+DD ++L EE D DA L +E +
Sbjct: 6 FWDDQRKAQKLIDENNRLKLKYDNFNSLVKKVDDLKVNLELLEESD--DADLEKEFNDEL 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E K LD + L+ LL+G YD+ A++ I GAGGT++Q
Sbjct: 64 SETQKELDSYRLSLLLNGKYDENNAIVEIHPGAGGTESQ 102
>gi|425055590|ref|ZP_18459063.1| peptide chain release factor 2 [Enterococcus faecium 505]
gi|403033663|gb|EJY45154.1| peptide chain release factor 2 [Enterococcus faecium 505]
Length = 326
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 103/151 (68%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L +E++D++I +DL+I RA G GGQ++NK E+AVRITH+PTG V
Sbjct: 174 HTSFCSVDVMPEL-DETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+ LKAKL + E++ E +RG+ + WG QIR+YVFHPY
Sbjct: 233 ASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDG L+ FI YLK
Sbjct: 293 MVKDHRTNVETGNVQAVMDGYLDLFIDGYLK 323
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FWD+ AQ+ + K+ + ++++ +V++ +E DA + EEA
Sbjct: 2 AEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVEMLQE--EPDAAMQEEA 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ I L++ + +EL+ LL GPYD+ A++ + GAGGT++Q
Sbjct: 60 ETRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQ 102
>gi|415705167|ref|ZP_11460438.1| peptide chain release factor 2 [Gardnerella vaginalis 75712]
gi|388051889|gb|EIK74913.1| peptide chain release factor 2 [Gardnerella vaginalis 75712]
Length = 380
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 114/160 (71%), Gaps = 2/160 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QT FS EV+PL+ E + + IP+ D+ + +A G GGQ VN +AVRITH+PTG+ V
Sbjct: 213 QTGFSAVEVIPLV-EATDHIDIPDSDIRVDTFQASGPGGQGVNTTYSAVRITHLPTGLVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ERSQ+ N+ A++ L+++LLV+ + A++ K++ GD +KA WG Q+R+YV HPY+
Sbjct: 272 SMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGD-IKASWGDQMRSYVLHPYQ 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 303
+VKD+RTG+ETS +V DG+++ FI++ +++++ ++A
Sbjct: 331 MVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWRHEQRVAA 370
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF DVEA + I + + L+ +A+LE +A++ WD+ AQ+ L+
Sbjct: 5 DFAQALNDVEA---KYSLISKALDVNSLKTAIADLEKQASEPGLWDDSEHAQQVTSKLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ ++ L + +++D T+++L +E + D+ + EA + + LD E+ LL
Sbjct: 62 AQSQLKRLQAVEQRIEDTKTLIELGQEEEDADS--MSEAQEELGSIAHELDDMEVQTLLD 119
Query: 123 GPYDKEGAVISITAGAGGTDA 143
G YD AV++I +GAGG DA
Sbjct: 120 GEYDARAAVVTIRSGAGGVDA 140
>gi|380031731|ref|YP_004888722.1| peptide chain release factor 2, C-terminal fragment (natural
frameshift) [Lactobacillus plantarum WCFS1]
gi|342240974|emb|CCC78208.1| peptide chain release factor 2, C-terminal fragment (natural
frameshift) [Lactobacillus plantarum WCFS1]
Length = 357
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/153 (50%), Positives = 108/153 (70%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++++DV I EDL+I RA G GGQ+VNK +AVRITH+PTG+ V
Sbjct: 199 HTSFASVDVMPEL-DDTVDVDIRPEDLKIDVYRASGAGGQHVNKTSSAVRITHVPTGIVV 257
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ AL+ L+AKL EE++A E I+G+ + WG QIR+YVFHPY
Sbjct: 258 ASQAQRSQLQNRQTALNMLRAKLYEREEEKKAKERAAIQGEQMDIGWGSQIRSYVFHPYT 317
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E+ +VMDG+L+PF+ +YL++K
Sbjct: 318 MVKDHRTNYESHHGQAVMDGDLDPFMDAYLQWK 350
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 4/119 (3%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDD-AVTIVK 85
L L + + E E + A+ FWD++A AQ+ + +K K + ++ D AV
Sbjct: 12 LDALNESIQENEARMAEPGFWDDQAAAQKVIDENNVLKGKYDTFKQLADEVGDLAVAYEL 71
Query: 86 LTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L+EE DA + E + + L Q+ L LL GPYD+ A++ I GAGGT++Q
Sbjct: 72 LSEE---PDAEMQAEFETDFQHAEHDLQQYRLNLLLDGPYDRNNAILEIHPGAGGTESQ 127
>gi|443630926|ref|ZP_21115107.1| peptide chain release factor 2 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443348731|gb|ELS62787.1| peptide chain release factor 2 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 327
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 105/155 (67%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP +E +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT V V
Sbjct: 174 HTSFVSCEVMPEFNDE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQTERSQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E ++ +VMDG+++ FI +YL+ K S
Sbjct: 293 MVKDHRTNTEMGNVQAVMDGDIDTFIDAYLRSKLS 327
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 61/105 (58%), Gaps = 6/105 (5%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLE 99
AD FW+++ +AQ + +KD +N +K K++++ +++T ++ + D L
Sbjct: 2 ADPEFWNDQQKAQTVINEANGLKDYVN---SYK-KLNESHEELQMTHDLLKEEPDQDLQL 57
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E +K L K ++FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 58 ELEKELKALTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|415728929|ref|ZP_11472267.1| peptide chain release factor 2 [Gardnerella vaginalis 6119V5]
gi|388064929|gb|EIK87444.1| peptide chain release factor 2 [Gardnerella vaginalis 6119V5]
Length = 380
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 114/160 (71%), Gaps = 2/160 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QT FS EV+PL+ E + + IP+ D+ + +A G GGQ VN +AVRITH+PTG+ V
Sbjct: 213 QTGFSAVEVIPLV-EATDHIDIPDSDIRVDTFQASGPGGQGVNTTYSAVRITHLPTGLVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ERSQ+ N+ A++ L+++LLV+ + A++ K++ GD +KA WG Q+R+YV HPY+
Sbjct: 272 SMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGD-IKASWGDQMRSYVLHPYQ 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 303
+VKD+RTG+ETS +V DG+++ FI++ +++++ ++A
Sbjct: 331 MVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWRHEQRVAA 370
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF +DVE+ + I + + L+ +A+LE +AA+ WD+ AQ+ L+
Sbjct: 5 DFAQALRDVES---KYASIVKALDVDSLKVTIADLEKQAAEPGLWDDSEHAQQVTSKLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ ++ L +++D T+++L +E DA + EA + + LD E+ LL
Sbjct: 62 AQSQLKRLQAVDQRIEDTKTLIELGQE--EGDADSMSEAQDELGSIAHELDDMEVQTLLD 119
Query: 123 GPYDKEGAVISITAGAGGTDA 143
G YD AV++I +GAGG DA
Sbjct: 120 GEYDARSAVVTIRSGAGGVDA 140
>gi|415719555|ref|ZP_11467715.1| peptide chain release factor 2 [Gardnerella vaginalis 1500E]
gi|388059080|gb|EIK81840.1| peptide chain release factor 2 [Gardnerella vaginalis 1500E]
Length = 380
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 114/160 (71%), Gaps = 2/160 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QT FS EV+PL+ E + + IP+ D+ + +A G GGQ VN +AVRITH+PTG+ V
Sbjct: 213 QTGFSAVEVIPLV-EATDHIDIPDSDIRVDTFQASGPGGQGVNTTYSAVRITHLPTGLVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ERSQ+ N+ A++ L+++LLV+ + A++ K++ GD +KA WG Q+R+YV HPY+
Sbjct: 272 SMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGD-IKASWGDQMRSYVLHPYQ 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 303
+VKD+RTG+ETS +V DG+++ FI++ +++++ ++A
Sbjct: 331 MVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWRHEQRVAA 370
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF +DVE+ + I + + L+ +A+LE +AA+ WD+ AQ+ L+
Sbjct: 5 DFAQALRDVES---KYASIEKALDVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ ++ L +++D T+++L +E DA + EA + + LD E+ LL
Sbjct: 62 AQSQLKRLQAVDQRIEDTKTLIELGQE--EGDADSMSEAQEELGSIAHELDDMEVQTLLD 119
Query: 123 GPYDKEGAVISITAGAGGTDA 143
G YD AV++I +GAGG DA
Sbjct: 120 GEYDARSAVVTIRSGAGGVDA 140
>gi|294791755|ref|ZP_06756903.1| peptide chain release factor 2 [Veillonella sp. 6_1_27]
gi|294793616|ref|ZP_06758753.1| peptide chain release factor 2 [Veillonella sp. 3_1_44]
gi|416999056|ref|ZP_11939725.1| peptide chain release factor 2 [Veillonella parvula
ACS-068-V-Sch12]
gi|294455186|gb|EFG23558.1| peptide chain release factor 2 [Veillonella sp. 3_1_44]
gi|294456985|gb|EFG25347.1| peptide chain release factor 2 [Veillonella sp. 6_1_27]
gi|333977209|gb|EGL78068.1| peptide chain release factor 2 [Veillonella parvula
ACS-068-V-Sch12]
Length = 330
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 112/158 (70%), Gaps = 1/158 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP + ++++++ I +D+++ RA G GGQ++NK ++AVR+TH PTG+ V
Sbjct: 174 HTSFAAVDVMPEI-DDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C +RSQ+ N+ +AL L+AKL + E++A +QI G EWG QIR+YVFHPY
Sbjct: 233 QCQTQRSQMQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYN 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSL 301
LVKD RT ET ++ +VMDG L+PFI+ +LK + ++++
Sbjct: 293 LVKDHRTSVETGNVQAVMDGNLDPFIEGFLKKEANLTI 330
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+D +FWDN +A+E Q T +K+ + + ++DA ++++ +D D + E
Sbjct: 2 SDPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANMMLEMA--IDEDDLSMESEI 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+K++ + L++ E+ LLSG YD A+++ AGAGGT+AQ
Sbjct: 60 KEYVKQIEETLEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQ 102
>gi|415703468|ref|ZP_11459284.1| peptide chain release factor 2 [Gardnerella vaginalis 284V]
gi|415716587|ref|ZP_11466579.1| peptide chain release factor 2 [Gardnerella vaginalis 1400E]
gi|388052508|gb|EIK75530.1| peptide chain release factor 2 [Gardnerella vaginalis 284V]
gi|388057204|gb|EIK80037.1| peptide chain release factor 2 [Gardnerella vaginalis 1400E]
Length = 380
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 114/160 (71%), Gaps = 2/160 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QT FS EV+PL+ E + + IP+ D+ + +A G GGQ VN +AVRITH+PTG+ V
Sbjct: 213 QTGFSAVEVIPLV-EATDHIDIPDSDIRVDTFQASGPGGQGVNTTYSAVRITHLPTGLVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ERSQ+ N+ A++ L+++LLV+ + A++ K++ GD +KA WG Q+R+YV HPY+
Sbjct: 272 SMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGD-IKASWGDQMRSYVLHPYQ 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 303
+VKD+RTG+ETS +V DG+++ FI++ +++++ ++A
Sbjct: 331 MVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWRHEQRVAA 370
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF DVEA + I + + L+ +A+LE +A++ WD+ AQ+ L+
Sbjct: 5 DFAQALNDVEA---KYSLISKALDVNSLKTAIADLEKQASEPGLWDDSEHAQQVTSKLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ ++ L + +++D T+++L +E + D+ + EA + + LD E+ LL
Sbjct: 62 AQSQLKRLQAVEQRIEDTKTLIELGQEEEDADS--MSEAQEELGNIAHELDDMEVQTLLD 119
Query: 123 GPYDKEGAVISITAGAGGTDA 143
G YD AV++I +GAGG DA
Sbjct: 120 GEYDARAAVVTIRSGAGGVDA 140
>gi|423349181|ref|ZP_17326837.1| peptide chain release factor 2 [Scardovia wiggsiae F0424]
gi|393703410|gb|EJD65611.1| peptide chain release factor 2 [Scardovia wiggsiae F0424]
Length = 373
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 116/164 (70%), Gaps = 4/164 (2%)
Query: 144 QTSFSGAEVMPLL-PEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVT 202
QTSF+ EV+PL+ P + +D IP+ D+ + + G GGQ VN +AVRITH+PTG+
Sbjct: 213 QTSFAAVEVIPLVEPTDHID--IPDSDIRVDTYMSHGPGGQGVNTTYSAVRITHLPTGIV 270
Query: 203 VRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPY 262
V +ERSQ+ N+ A+S L+++LLVI +E+ A++ K++ GD +KA WG Q+R+YV HPY
Sbjct: 271 VTMQDERSQIQNRAAAMSVLQSRLLVIKQEEEAAKKKELAGD-IKASWGDQMRSYVLHPY 329
Query: 263 KLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDA 306
++VKD+RTG+ETS+ +V DG+++ I + +++++ + +A
Sbjct: 330 QMVKDLRTGYETSNTQNVFDGDIDGLIDAGIRWRHQQRKGSGNA 373
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
Y+ +D+ A + I + GL L +++A LE +AA WD++ AQ L +
Sbjct: 4 YDFTQDLGEARTKFTTITRAVGLDSLRRKIAGLEKEAAAPGLWDDQDNAQRVTSQLAQAQ 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
+++ L D +++DD + L E + D+ +EA +K +++ L E+ LL G
Sbjct: 64 NELKQLEDIGSRLDDIEVLYSLGSEEEDADS--RDEAREELKAVSRELSDVEIQTLLDGE 121
Query: 125 YDKEGAVISITAGAGGTDA 143
YD AV++I +GAGG DA
Sbjct: 122 YDNRAAVVTIRSGAGGVDA 140
>gi|363548458|sp|Q88YL5.2|RF2_LACPL RecName: Full=Peptide chain release factor 2; Short=RF-2
Length = 377
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/153 (50%), Positives = 108/153 (70%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++++DV I EDL+I RA G GGQ+VNK +AVRITH+PTG+ V
Sbjct: 219 HTSFASVDVMPEL-DDTVDVDIRPEDLKIDVYRASGAGGQHVNKTSSAVRITHVPTGIVV 277
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ AL+ L+AKL EE++A E I+G+ + WG QIR+YVFHPY
Sbjct: 278 ASQAQRSQLQNRQTALNMLRAKLYEREEEKKAKERAAIQGEQMDIGWGSQIRSYVFHPYT 337
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +E+ +VMDG+L+PF+ +YL++K
Sbjct: 338 MVKDHRTNYESHHGQAVMDGDLDPFMDAYLQWK 370
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 4/135 (2%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
+E V++ R S L L + + E E + A+ FWD++A AQ+ + +K K +
Sbjct: 16 IEEMQSAVDDFRGSLDLDALNESIQENEARMAEPGFWDDQAAAQKVIDENNVLKGKYDTF 75
Query: 71 TDFKTKMDD-AVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEG 129
++ D AV L+EE DA + E + + L Q+ L LL GPYD+
Sbjct: 76 KQLADEVGDLAVAYELLSEE---PDAEMQAEFETDFQHAEHDLQQYRLNLLLDGPYDRNN 132
Query: 130 AVISITAGAGGTDAQ 144
A++ I GAGGT++Q
Sbjct: 133 AILEIHPGAGGTESQ 147
>gi|354613403|ref|ZP_09031324.1| Peptide chain release factor 2 [Saccharomonospora paurometabolica
YIM 90007]
gi|353222233|gb|EHB86550.1| Peptide chain release factor 2 [Saccharomonospora paurometabolica
YIM 90007]
Length = 368
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 187/364 (51%), Gaps = 76/364 (20%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQET------ 56
DF KD+ ++ ++ A L L KE+AELE +AA W++ AQ+
Sbjct: 4 DFETAIKDL---GGKLSQVEAVMDLDALRKEVAELEQEAARPDLWNDPDAAQKVTSRLSH 60
Query: 57 ----LQALTDVKDKINLLT----------DFKTKMDDAVTIVKLTEEMDSTD-----AGL 97
L+ +TD++ ++N L+ D ++ + + +LT E+D+ + +G
Sbjct: 61 QQGALRKVTDLRQRVNDLSVLHELAVAEGDAASRAEADTELAELTREIDALEVRTLLSGE 120
Query: 98 LEEAASIIKELNKA-----LDQFEL---------------TQLLSGPYDKEGAVISIT-- 135
+E +++ ++A D E+ T++ Y +E + S T
Sbjct: 121 YDERNAVVTIRSEAGGVDAADWAEMLLRMYLRWAERHNYPTRIYDISYAEEAGIRSATFK 180
Query: 136 ---AGAGGTDA--------------------QTSFSGAEVMPLLPEESMDVQIPEEDLEI 172
+ A GT + QTSF+ EV+P + E V+IPE+D+ +
Sbjct: 181 VEASYAYGTLSVEQGTHRLVRISPFDNQNRRQTSFAHVEVLPEVAEVDH-VEIPEKDIRV 239
Query: 173 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 232
R+ G GGQ+VN ++AVRITH+PTGV V C E+SQL NK A+S L+AKLL +E
Sbjct: 240 DVYRSSGPGGQSVNTTDSAVRITHLPTGVVVSCQNEKSQLQNKAVAMSVLQAKLLQRKKE 299
Query: 233 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 292
+ +E+ +R + WG Q+R+YV HPY+LVKD+RT HET + +V++GE++ F+ +
Sbjct: 300 EERAELDALRDSG--SSWGNQMRSYVLHPYQLVKDLRTEHETGNPTAVLEGEIDRFLDAG 357
Query: 293 LKYK 296
++++
Sbjct: 358 IRWR 361
>gi|296330264|ref|ZP_06872745.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305676131|ref|YP_003867803.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
str. W23]
gi|296152532|gb|EFG93400.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305414375|gb|ADM39494.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
str. W23]
Length = 327
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 105/155 (67%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP +E +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT V V
Sbjct: 174 HTSFVSCEVMPEFNDE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQTERSQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E ++ +VMDG+++ FI +YL+ K S
Sbjct: 293 MVKDHRTNTEMGNVQAVMDGDIDTFIDAYLRSKLS 327
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLE 99
AD FW+++ +AQ + +KD +N +K K++D+ +++T ++ + D+ L
Sbjct: 2 ADPEFWNDQQKAQTVINEANGIKDYVN---SYK-KLNDSHEELQMTHDLLKEEPDSDLQL 57
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E +K L K ++FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 58 ELEKELKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|428281124|ref|YP_005562859.1| hypothetical protein BSNT_05369 [Bacillus subtilis subsp. natto
BEST195]
gi|291486081|dbj|BAI87156.1| hypothetical protein BSNT_05369 [Bacillus subtilis subsp. natto
BEST195]
Length = 327
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 105/155 (67%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP +E +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT V V
Sbjct: 174 HTSFVSCEVMPEFNDE-IDIDIRAEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQTERSQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E ++ +VMDG+++ FI +YL+ K S
Sbjct: 293 MVKDHRTNTEMGNVQAVMDGDIDTFIDAYLRSKLS 327
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD FW+++ +AQ + +KD +N ++ L +E TD L E
Sbjct: 2 ADPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQMTHDLLKEEPDTDLQL--EL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+K L K ++FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 EKELKSLTKDFNEFELQLLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|86133579|ref|ZP_01052161.1| peptide chain release factor 2 [Polaribacter sp. MED152]
gi|85820442|gb|EAQ41589.1| peptide chain release factor 2 [Polaribacter sp. MED152]
Length = 367
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 107/163 (65%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ V P+ ++S+++ I D+EI+ +R+ G GGQNVNKVET
Sbjct: 195 LVRISPFDSNAKRHTSFASVYVYPV-ADDSIEIDINPADIEITTARSSGAGGQNVNKVET 253
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
V++TH P+G+ + C+ RSQ N+ A+ LK++L I +++ + I + +K EW
Sbjct: 254 KVQLTHKPSGIQISCSNSRSQHDNRATAMQMLKSQLYEIELQKQQAARDDIEANKMKNEW 313
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYV HPYKLVKDVRT HET ++ +VMDG + F+K+YL
Sbjct: 314 GSQIRNYVMHPYKLVKDVRTAHETGNVDAVMDGNINAFLKAYL 356
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 18/136 (13%)
Query: 15 SDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFK 74
S R++++++ + + E+A E K A+ FW++ A+ ++ L FK
Sbjct: 11 STRIDKLKSYLEIDKKLIEIANEEEKTANPDFWNDPKAAELVMKELR-----------FK 59
Query: 75 TK-MDDAVTIVKLTEEMDSTDAGLLEEAAS---IIKELNKA---LDQFELTQLLSGPYDK 127
K ++D TI++L E++ E+ A ++++ K L+ E +LS D
Sbjct: 60 KKWVEDYNTIIRLNEDLIVFYEFYKEDEADEKDVVQQYEKTIALLEDIEFKNMLSDEGDS 119
Query: 128 EGAVISITAGAGGTDA 143
AVI ITAGAGGT++
Sbjct: 120 LSAVIQITAGAGGTES 135
>gi|449104795|ref|ZP_21741533.1| peptide chain release factor 2 [Treponema denticola AL-2]
gi|449127915|ref|ZP_21764185.1| peptide chain release factor 2 [Treponema denticola SP33]
gi|448943247|gb|EMB24139.1| peptide chain release factor 2 [Treponema denticola SP33]
gi|448962931|gb|EMB43617.1| peptide chain release factor 2 [Treponema denticola AL-2]
Length = 320
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 108/164 (65%), Gaps = 2/164 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ P+L +++++V I EDL I RAGG GGQ+VNK ++AVRITHIPTG+ V
Sbjct: 157 HTSFTSVFAFPVL-DDTIEVDIRPEDLRIDTYRAGGAGGQHVNKTDSAVRITHIPTGIVV 215
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C +RSQ++N+ A++ LK++L EEQ+ E + + WG QIR+YVF PY
Sbjct: 216 ACQTQRSQISNRATAMNVLKSRLYNYYEEQKEKENMKFAAEKKGISWGNQIRSYVFQPYT 275
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKY-SMSLSASDA 306
+VKD RT +ET +I +VMDGE++ FI S+L K MS+ DA
Sbjct: 276 MVKDHRTKYETGNIQAVMDGEIDEFINSFLNTKIEDMSIDEDDA 319
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+K++I + ++ D +++L+EE S + L EE S + + + + LLS
Sbjct: 7 LKNRIYPWQELMDEVSDLEVLMELSEE--SGNEELSEEIGSNYNSVYEKYKKLSILSLLS 64
Query: 123 GPYDKEGAVISITAGAGGTDA 143
G DK A +++ AGAGGT+A
Sbjct: 65 GEVDKNDAYLTVHAGAGGTEA 85
>gi|67461212|sp|Q927Y4.2|RF2_LISIN RecName: Full=Peptide chain release factor 2; Short=RF-2
Length = 366
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L +E +++++ EDL+I RA G GGQ++N ++AVR+THIP+G+ V
Sbjct: 213 HTSFVSVDVMPELDDE-IEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQL N+ +A+ LK KL +E++ E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 272 TCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYS 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 332 MVKDHRTNYETGNIQAVMDGDLDDFINAYLR 362
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 2/138 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R ++E + ++++ R S L +E +AELE + D +FW+++ AQ+ + K+
Sbjct: 6 IRNELEKTAQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKET 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + + ++L +E D L E IK + +FEL +LS PYD
Sbjct: 66 YQAFHALEEEQESMEISLELLKE--EADEDLQAELEKDIKAYVATISEFELKLMLSDPYD 123
Query: 127 KEGAVISITAGAGGTDAQ 144
K A++ + GAGGT++Q
Sbjct: 124 KNNAILELHPGAGGTESQ 141
>gi|414153363|ref|ZP_11409690.1| Peptide chain release factor 2 [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
gi|411455745|emb|CCO07593.1| Peptide chain release factor 2 [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
Length = 328
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 108/153 (70%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P++ EE ++VQI EDL+I R+GG GGQ+VNK ++AVRITH+PTG+ V
Sbjct: 174 HTSFASVDVLPVV-EEEVEVQIRPEDLKIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ N++ A+ LKAKL+ + ++ E+ +RG+ WG QIR+YVFHPY
Sbjct: 233 ACQNERSQTYNRMAAMKLLKAKLIDLELRKKEEELAALRGEQKDIAWGNQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RTG ET ++ +VMDG +E FI + LK K
Sbjct: 293 LVKDHRTGVETGNVQAVMDGRIEEFIAACLKQK 325
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 45 SFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASI 104
FWD+ +++ Q L +KD++ ++ + D +++L +E D L EE +
Sbjct: 5 GFWDDLEHSRQLNQQLAGLKDRVARFASLESALQDLEVMLELCQE--EQDPLLEEELTAG 62
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+++L + L EL LL+GPYD+ A++S+ GAGGT++Q
Sbjct: 63 LEDLARRLADTELEVLLAGPYDRNDAILSLHPGAGGTESQ 102
>gi|269797862|ref|YP_003311762.1| peptide chain release factor 2 [Veillonella parvula DSM 2008]
gi|269094491|gb|ACZ24482.1| bacterial peptide chain release factor 2 (bRF- 2) [Veillonella
parvula DSM 2008]
Length = 368
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 112/158 (70%), Gaps = 1/158 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP + ++++++ I +D+++ RA G GGQ++NK ++AVR+TH PTG+ V
Sbjct: 212 HTSFAAVDVMPEI-DDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C +RSQ+ N+ +AL L+AKL + E++A +QI G EWG QIR+YVFHPY
Sbjct: 271 QCQTQRSQMQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYN 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSL 301
LVKD RT ET ++ +VMDG L+PFI+ +LK + ++++
Sbjct: 331 LVKDHRTSVETGNVQAVMDGNLDPFIEGFLKKEANLTI 368
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 76/139 (54%), Gaps = 2/139 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L+ + +R+ + + Q E + L+++ +D +FWDN +A+E Q T +K+
Sbjct: 4 DLKPIISNLEERIYGMGIHFNIAQKEDRIFTLDVQMSDPTFWDNPDKAREISQEATQLKN 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
+ + ++DA ++++ +D D + E +K++ + L++ E+ LLSG Y
Sbjct: 64 AVESYKQLVSDIEDANVMLEMA--IDEDDLSMESEIKEYVKQIEETLEKQEVLLLLSGEY 121
Query: 126 DKEGAVISITAGAGGTDAQ 144
D A+++ AGAGGT+AQ
Sbjct: 122 DANNAILTFHAGAGGTEAQ 140
>gi|300174043|ref|YP_003773209.1| peptide chain release factor 2 [Leuconostoc gasicomitatum LMG
18811]
gi|299888422|emb|CBL92390.1| Peptide chain release factor 2 [Leuconostoc gasicomitatum LMG
18811]
Length = 372
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 109/156 (69%), Gaps = 1/156 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++++D++I ++D+++ R+GG GGQNVNKV T VR+TH PTG+ V
Sbjct: 214 HTSFVSVDVMPEL-DDTIDIEIRDDDVKMDVFRSGGAGGQNVNKVSTGVRLTHEPTGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T ER+Q N+ A+ LK KL + E++ +E + GD ++ WG QIR+YV HPY+
Sbjct: 273 SSTVERTQYGNRDYAMRLLKGKLYQLELEKQEAERAALTGDKLENGWGSQIRSYVLHPYQ 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSM 299
+VKD RT +ET+ V+DG+L+PFI +YL+++ S+
Sbjct: 333 MVKDHRTDYETNQPQQVLDGDLDPFINAYLQWQLSL 368
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 74/128 (57%), Gaps = 1/128 (0%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
+ + RA+ L+ L +E+A+ E + +S FWD+ +AQ+ ++ +K++ + + +
Sbjct: 15 ENIARFRATLDLEALTEEIADFENRMTESGFWDDNVKAQKIIEENNVLKNRRDSFLNLTS 74
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
+ ++ ++++ E D TD+ ++ E I + K ++ + L QLL+ PYD A++ +
Sbjct: 75 QAEEIDLLIEMLSE-DVTDSEMMSELEESIVKAQKDIETYNLEQLLTEPYDANNAILEVH 133
Query: 136 AGAGGTDA 143
G+GGT++
Sbjct: 134 PGSGGTES 141
>gi|299144433|ref|ZP_07037513.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298518918|gb|EFI42657.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 348
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 108/151 (71%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V P L +++ +V+I EDL+I R+ G GGQ+VN ++AVRITHIPTG+ V
Sbjct: 194 HTSFASLDVYPQLDDDN-EVEIKAEDLKIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVV 252
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ+ N+ KA++ LKAKL+ +AEE++ +I+ ++G+ + WG QIR+YVF PY
Sbjct: 253 QCQNERSQIQNRDKAMNMLKAKLIALAEEEKKEKIEDLQGNYSQIAWGSQIRSYVFQPYT 312
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E D+ VMDG L+ FI SYL+
Sbjct: 313 LVKDHRTNTEIGDVNKVMDGYLDEFINSYLQ 343
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L ++ ++ EL K D FWDN AQ+ ++ + KI+ +++A ++ L
Sbjct: 7 LSEMRNKVKELNDKQMDVGFWDNAENAQKVIREQNHYQSKIDKYDKLIKSINEAEDLIDL 66
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E D D + ++ + K + F+L LL+G YD +ISI AGAGGT+AQ
Sbjct: 67 MEMED--DYSFYGDLKLDLENIEKLSNDFKLETLLNGEYDSNNCIISIHAGAGGTEAQ 122
>gi|449116322|ref|ZP_21752773.1| peptide chain release factor 2 [Treponema denticola H-22]
gi|448954209|gb|EMB34992.1| peptide chain release factor 2 [Treponema denticola H-22]
Length = 320
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 108/164 (65%), Gaps = 2/164 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ P+L +++++V I EDL I RAGG GGQ+VNK ++AVRITHIPTG+ V
Sbjct: 157 HTSFTSVFAFPVL-DDTIEVDIRPEDLRIDTYRAGGAGGQHVNKTDSAVRITHIPTGIVV 215
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C +RSQ++N+ A++ LK++L EEQ+ E + + WG QIR+YVF PY
Sbjct: 216 ACQTQRSQISNRATAMNVLKSRLYNYYEEQKEKENMKFAAEKKGISWGNQIRSYVFQPYT 275
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKY-SMSLSASDA 306
+VKD RT +ET +I +VMDGE++ FI S+L K MS+ DA
Sbjct: 276 MVKDHRTKYETGNIQAVMDGEIDEFINSFLNTKIEDMSIDEDDA 319
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+K++I + ++ D +++L+EE S + L EE S + + + + LLS
Sbjct: 7 LKNRIYPWQELMDEVSDLEVLMELSEE--SGNEELSEEIGSNYNSIYEKYKKLSILSLLS 64
Query: 123 GPYDKEGAVISITAGAGGTDA 143
G DK A +++ AGAGGT+A
Sbjct: 65 GEVDKNDAYLTVHAGAGGTEA 85
>gi|284023776|ref|ZP_06378174.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
132]
Length = 331
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 104/151 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH P+G+ V
Sbjct: 175 HTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 235 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYS 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 295 MVKDHRTNEETGKVDAVMDGDIRPFIESYLR 325
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ +FWDN+ +AQ+ + +K +N + ++DD L +E D + E+
Sbjct: 3 AEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQE--EFDEEMKEDL 60
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +D++EL LL GP+D A++ + GAGGT++Q
Sbjct: 61 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQ 103
>gi|386760146|ref|YP_006233363.1| peptide chain release factor 2 [Bacillus sp. JS]
gi|384933429|gb|AFI30107.1| peptide chain release factor 2 [Bacillus sp. JS]
Length = 327
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 105/155 (67%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP +E +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT V V
Sbjct: 174 HTSFVSCEVMPEFNDE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQTERSQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E ++ +VMDG+++ FI +YL+ K S
Sbjct: 293 MVKDHRTNTEMGNVQAVMDGDIDTFIDAYLRSKLS 327
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLE 99
AD FW+++ +AQ + +KD +N +K K++++ +++T ++ + D+ L
Sbjct: 2 ADPEFWNDQQKAQTVINEANGLKDYVN---SYK-KLNESHEELQMTHDLLKEEPDSDLQL 57
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E +K L K ++FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 58 ELEKELKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|347534212|ref|YP_004840882.1| peptide chain release factor 2 [Lactobacillus sanfranciscensis TMW
1.1304]
gi|345504268|gb|AEN98950.1| Peptide chain release factor 2 [Lactobacillus sanfranciscensis TMW
1.1304]
Length = 352
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 108/153 (70%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ VMP L +E+++V I +DL I R+ G GGQ++NK +AVRITH+PTG+
Sbjct: 196 HTSFASVNVMPEL-DENVNVDINPDDLRIDVFRSSGAGGQHINKTSSAVRITHLPTGIVT 254
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N++ A++ LK+KL + EE++A E +I G ++ WG QIR+YVFHPY
Sbjct: 255 SSQAQRSQLQNRVTAMNMLKSKLYELEEEKKAEEKAKIEGKQLEIGWGSQIRSYVFHPYT 314
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RTGHET++ +VMDG+L PFI YL++K
Sbjct: 315 MVKDHRTGHETANGKAVMDGDLNPFINDYLQWK 347
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L L + ++ E K A++ FWDN+ +AQ+ + ++K K + + +D + L
Sbjct: 9 LDHLNEAISINEGKMAEAGFWDNQRKAQKVIDENNELKAKYDTFHQLVEEYEDLEVTLSL 68
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D DA L EE + ++ K + ++L LL+G YDK A++ I GAGGT+A+
Sbjct: 69 ISTED--DAELEEEFNETLAKVEKHIQNYKLNLLLNGKYDKNNAIVEIHPGAGGTEAE 124
>gi|385801583|ref|YP_005837986.1| peptide chain release factor 2 [Gardnerella vaginalis HMP9231]
gi|415707102|ref|ZP_11461949.1| peptide chain release factor 2 [Gardnerella vaginalis 0288E]
gi|333393731|gb|AEF31649.1| peptide chain release factor 2 [Gardnerella vaginalis HMP9231]
gi|388054102|gb|EIK77047.1| peptide chain release factor 2 [Gardnerella vaginalis 0288E]
Length = 380
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 114/160 (71%), Gaps = 2/160 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QT FS EV+PL+ E + + IP+ D+ + +A G GGQ VN +AVRITH+PTG+ V
Sbjct: 213 QTGFSAVEVIPLV-EATDHIDIPDSDIRVDTFQASGPGGQGVNTTYSAVRITHLPTGLVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ERSQ+ N+ A++ L+++LLV+ + A++ K++ GD +KA WG Q+R+YV HPY+
Sbjct: 272 SMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGD-IKASWGDQMRSYVLHPYQ 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 303
+VKD+RTG+ETS +V DG+++ FI++ +++++ ++A
Sbjct: 331 MVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWRHEQRVAA 370
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF DVEA + I + + L+ +A+LE +A++ WD+ AQ+ L+
Sbjct: 5 DFSQALNDVEA---KYSSISKALDVDSLKVTIADLEKQASEPGLWDDSEHAQQVTSKLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ ++ L + +++D T+++L +E + D+ + EA + + LD E+ LL
Sbjct: 62 AQSQLKRLQAVEQRIEDTKTLIELGQEEEDADS--MSEAQEELGSIAHELDDMEVQTLLD 119
Query: 123 GPYDKEGAVISITAGAGGTDA 143
G YD AV++I +GAGG DA
Sbjct: 120 GEYDARAAVVTIRSGAGGVDA 140
>gi|259502724|ref|ZP_05745626.1| peptide chain release factor RF2 [Lactobacillus antri DSM 16041]
gi|259169369|gb|EEW53864.1| peptide chain release factor RF2 [Lactobacillus antri DSM 16041]
Length = 332
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++S++V I DL + R+ G GGQ++NK E+AVRITH+PTG+
Sbjct: 174 HTSFASVDVMPEL-DDSVEVDINPADLRVDTFRSSGAGGQHINKTESAVRITHLPTGLVA 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQL N+ A++ LK+KL + EE++A E +I G+ ++ WG QIR+YVFHPY
Sbjct: 233 SSQAERSQLLNRQTAMNMLKSKLYELEEEKKAKERAEIEGEQLEIGWGSQIRSYVFHPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKD R+G+ET + +VMDGEL+PFI +YL++K S
Sbjct: 293 LVKDNRSGYETHNGQAVMDGELDPFINAYLQWKLS 327
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A FWD+ +AQ+ + D+K+K + + ++ A L D L +E
Sbjct: 2 AQPGFWDDNEKAQQLINDNNDLKEKRDTYVALRDQL--ADLETNLELLELEPDPDLEQEF 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
A+ + +AL Q+ L+QLLS YD + A++ I GAGGT+AQ
Sbjct: 60 AASFAKTTEALQQYRLSQLLSEKYDGKNAILEIHPGAGGTEAQ 102
>gi|429750419|ref|ZP_19283467.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
taxon 332 str. F0381]
gi|429165171|gb|EKY07240.1| putative peptide chain release factor 2 [Capnocytophaga sp. oral
taxon 332 str. F0381]
Length = 316
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 105/150 (70%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL +++++++I D+ R+ G GGQNVNKVETAVR+ H PTG+ +
Sbjct: 156 HTSFASVYVYPL-ADDTIEIEINPADITFETMRSSGAGGQNVNKVETAVRLRHHPTGIII 214
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+E RSQL NK KAL LK++L I ++R ++ +I +K EWG QIRNYV HPYK
Sbjct: 215 ENSETRSQLDNKNKALQLLKSQLYEIELKKRQAKRDEIEAGKMKIEWGSQIRNYVMHPYK 274
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRT +E++ + SVM+GEL+ F+K+YL
Sbjct: 275 LVKDVRTNYESTYVDSVMNGELDEFLKAYL 304
>gi|429736427|ref|ZP_19270325.1| peptide chain release factor 2 [Selenomonas sp. oral taxon 138 str.
F0429]
gi|429155106|gb|EKX97806.1| peptide chain release factor 2 [Selenomonas sp. oral taxon 138 str.
F0429]
Length = 368
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS +VMP + +++++V I +D+ + + RA G GGQ++NK +AVR+TH PTG+ V
Sbjct: 212 HTSFSACDVMPEI-DDAVEVPINMDDVRVDYFRASGAGGQHINKTSSAVRMTHEPTGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL NK + L L+AKL + +E++ EI ++ G K EWG QIR+YVF PY
Sbjct: 271 QCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEEIAKLEGVQQKIEWGSQIRSYVFQPYT 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKDVRT ET ++ +VMDGE++PFI++YL K
Sbjct: 331 MVKDVRTNAETGNVQAVMDGEIDPFIRAYLNAK 363
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 79/131 (60%), Gaps = 4/131 (3%)
Query: 15 SDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFK 74
++++++R S + E+++AELE K ++ SFWD+ A AQ+ Q L +K ++ + K
Sbjct: 13 GEKLDQMRISLEIPAKEEKIAELEYKMSEPSFWDDAAAAQKLNQELAALKGGVDTYEELK 72
Query: 75 TKMDDAVTIVKL-TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVIS 133
K +DA T+ ++ EE D T G + ++I E L+ +L LLSG YD A+++
Sbjct: 73 AKYEDAETLYEMGIEENDPTMEGDIRAELTLIAE---GLETLQLEVLLSGDYDANDAILT 129
Query: 134 ITAGAGGTDAQ 144
+ AGAGGT+AQ
Sbjct: 130 LHAGAGGTEAQ 140
>gi|221311479|ref|ZP_03593326.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
str. 168]
gi|221315806|ref|ZP_03597611.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221320721|ref|ZP_03602015.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221325006|ref|ZP_03606300.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
str. SMY]
gi|321313075|ref|YP_004205362.1| peptide chain release factor 2 [Bacillus subtilis BSn5]
gi|384177161|ref|YP_005558546.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|418031253|ref|ZP_12669738.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|449095977|ref|YP_007428468.1| peptide chain release factor [Bacillus subtilis XF-1]
gi|452912348|ref|ZP_21960976.1| peptide chain release factor 2 [Bacillus subtilis MB73/2]
gi|320019349|gb|ADV94335.1| peptide chain release factor 2 [Bacillus subtilis BSn5]
gi|349596385|gb|AEP92572.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|351472312|gb|EHA32425.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|407962365|dbj|BAM55605.1| peptide chain release factor 2 [Bacillus subtilis BEST7613]
gi|407966379|dbj|BAM59618.1| peptide chain release factor 2 [Bacillus subtilis BEST7003]
gi|449029892|gb|AGE65131.1| peptide chain release factor [Bacillus subtilis XF-1]
gi|452117376|gb|EME07770.1| peptide chain release factor 2 [Bacillus subtilis MB73/2]
Length = 327
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 105/155 (67%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP +E +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT V V
Sbjct: 174 HTSFVSCEVMPEFNDE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQTERSQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E ++ +VMDG+++ FI +YL+ K S
Sbjct: 293 MVKDHRTNTEMGNVQAVMDGDIDTFIDAYLRSKLS 327
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD FW+++ +AQ + +KD +N ++ L +E TD L E
Sbjct: 2 ADPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQMTHDLLKEEPDTDLQL--EL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+K L K ++FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 EKELKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|229087663|ref|ZP_04219789.1| Peptide chain release factor 2 [Bacillus cereus Rock3-44]
gi|228695624|gb|EEL48483.1| Peptide chain release factor 2 [Bacillus cereus Rock3-44]
Length = 327
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 104/155 (67%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH PT V
Sbjct: 174 HTSFVSCEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKD RT E ++ +VMDGE++PFI +YL+ + S
Sbjct: 293 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLRSRIS 327
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 4 AGFWDDQQGAQTVINEANALKD---MVGKFR-QLDETFENLEVTHELLKEEYDEDLHEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S +K L + ++++EL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 ESEVKSLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQ 102
>gi|398305006|ref|ZP_10508592.1| peptide chain release factor 2 [Bacillus vallismortis DV1-F-3]
Length = 327
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 105/155 (67%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP +E +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT V V
Sbjct: 174 HTSFVSCEVMPEFNDE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQTERSQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E ++ +VMDG+++ FI +YL+ K S
Sbjct: 293 MVKDHRTNTEMGNVQAVMDGDIDTFIDAYLRSKLS 327
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+D FW+++ +AQ + +KD +N ++ L +E TD L E
Sbjct: 2 SDPEFWNDQQKAQTVINEANGIKDYVNSYKKLSESHEELQMTHDLLKEEPDTDLQL--EL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+K L K ++FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 EKELKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|350267767|ref|YP_004879074.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349600654|gb|AEP88442.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 327
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 105/155 (67%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP +E +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT V V
Sbjct: 174 HTSFVSCEVMPEFNDE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQTERSQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E ++ +VMDG+++ FI +YL+ K S
Sbjct: 293 MVKDHRTNTEMGNVQAVMDGDIDTFIDAYLRSKLS 327
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLE 99
AD FW+++ +AQ + +KD +N +K K++++ +++T ++ + D+ L
Sbjct: 2 ADPEFWNDQQKAQTVINEANGIKDYVN---SYK-KLNESHEELQMTHDLLKEEPDSDLQL 57
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E +K L K ++FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 58 ELEKELKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|379058079|ref|ZP_09848605.1| peptide chain release factor 2 [Serinicoccus profundi MCCC 1A05965]
Length = 370
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 172/353 (48%), Gaps = 82/353 (23%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK-------------DKI 67
+R L +L ++ ELE +A+ WD+ AQ+ AL+ K D +
Sbjct: 19 VREVTDLDRLSAQITELETQASTPDLWDDVDNAQKVTSALSRAKAEHDKVVGMDARIDDL 78
Query: 68 NLLTDFKTKMDDAVTIVKLTEEMDSTDAGL------------------LEEAASIIKELN 109
L + + +DA T+V+ E+ AGL + EA I+
Sbjct: 79 EALVELGREENDADTLVEAEREL----AGLKKAVQLLEVRTLLNGDYDIREAVVTIRSGA 134
Query: 110 KALDQFEL------------------TQLLSGPYDKEGAVISIT-----AGAGGTDA--- 143
+D + T +L Y +E + S T A GT A
Sbjct: 135 GGVDAADFAEMLMRMYLRWAERHDYPTSVLDTSYAEEAGLKSATFEVKVPYAFGTLAVEA 194
Query: 144 -----------------QTSFSGAEVMPLLPEESMD-VQIPEEDLEISFSRAGGKGGQNV 185
QTSF+ EV+PL+ ES D ++IPE DL+I R+ G GGQ+V
Sbjct: 195 GTHRLVRISPFDNQGRRQTSFAAVEVVPLI--ESTDTIEIPEGDLKIDVFRSSGPGGQSV 252
Query: 186 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 245
N ++AVR+TH+PTG V E+SQ+ N+ AL L+++LL++ + + + K++ GD
Sbjct: 253 NTTDSAVRMTHLPTGTVVSMQNEKSQIQNRAAALRVLQSRLLLLKKAEEDAARKEMAGD- 311
Query: 246 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
VKA WG Q+R+YV HPY++VKD+RTGHE +V+DG+++ FI + +++K S
Sbjct: 312 VKASWGDQMRSYVLHPYQMVKDLRTGHEVGSTAAVLDGDIDDFIDAGIRWKRS 364
>gi|313113161|ref|ZP_07798787.1| peptide chain release factor 2 [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310624500|gb|EFQ07829.1| peptide chain release factor 2 [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 373
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EVMP L + ++ V I ED+E+ R+ G GGQ++NK +AVR+ H PTGV V
Sbjct: 214 QTSFASLEVMPEL-DNTIQVDISPEDIEMQVYRSSGAGGQHINKTSSAVRLIHKPTGVVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C +RSQ N+ A+ LKAKL IA++Q +I I+G + WG QIR+YVF PY
Sbjct: 273 SCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQNEIAWGHQIRSYVFMPYT 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT +ET ++ +VMDG+L+ FI +YLK
Sbjct: 333 MVKDHRTNYETGNVDAVMDGDLDGFIFAYLK 363
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 69/127 (54%), Gaps = 2/127 (1%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
V+++ + + K + ELE + F+D+ +++ + D+K K++ +
Sbjct: 18 VKDLEEALAIDASRKRVQELEHTMSRPGFYDDADLSKKVFDEVGDLKGKLSRFEKLQGLY 77
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
DDA T++++ +E D ++ EA + + KA+D+ +L +L+G YD A+++ AG
Sbjct: 78 DDAETMLEMLDE--EYDPAMIPEAEESVNAVGKAVDELQLMTMLNGEYDHSNAILTFHAG 135
Query: 138 AGGTDAQ 144
GGT+AQ
Sbjct: 136 TGGTEAQ 142
>gi|12642654|gb|AAK00335.1|AF320250_8 RF2 [Lactobacillus delbrueckii]
Length = 371
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 109/155 (70%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P + ++S+++ I +DL I R+ G GGQ++NK +AVRITHIPTG+
Sbjct: 213 HTSFASVEVIPEV-DDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPTGIVT 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQ N+ A++ ++AKL + EE++ E ++G+ + WG QIR+YVFHPY
Sbjct: 272 TSQAQRSQFQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDIAWGSQIRSYVFHPYS 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RTG+ET+D+ VMDG+L+PFI +YL+++ S
Sbjct: 332 MVKDHRTGYETADVGGVMDGKLDPFIYAYLQWRLS 366
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Query: 38 EMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGL 97
E K A+ FWDN+ +AQ+ + +K+K + K + D T ++L DA L
Sbjct: 37 EAKMAEPGFWDNQEKAQKLISETNLLKEKRDSFLALKKDLTDEETALELLRL--EADADL 94
Query: 98 LEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
++ + +L + Q+EL LLSG YD A++ I GAGGT+A
Sbjct: 95 QKDTEDQLAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAGGTEA 140
>gi|146300308|ref|YP_001194899.1| peptide chain release factor 2 [Flavobacterium johnsoniae UW101]
gi|146154726|gb|ABQ05580.1| bacterial peptide chain release factor 2 (bRF-2) [Flavobacterium
johnsoniae UW101]
Length = 254
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 106/150 (70%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF V PL+ ++S+++ I D+EI+ SR+ G GGQNVNKVET V++ H PTG+ +
Sbjct: 97 HTSFVSVYVYPLV-DDSIEIDINPADIEITTSRSSGAGGQNVNKVETKVQLVHKPTGIQI 155
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C+E RSQ N+ +A+ L+++L I +++ ++ I +K EWG QIRNYV PYK
Sbjct: 156 QCSETRSQQDNRQRAMQMLRSQLYEIELKKQQAQRADIEAGKMKIEWGSQIRNYVMQPYK 215
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRTG+ETSD+ VM+G ++ F+K+YL
Sbjct: 216 LVKDVRTGYETSDVDGVMNGNIDAFLKAYL 245
>gi|448239363|ref|YP_007403421.1| peptide chain release factor II [Geobacillus sp. GHH01]
gi|445208205|gb|AGE23670.1| peptide chain release factor II [Geobacillus sp. GHH01]
Length = 308
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P L +++++++I E+L+I R+ G GGQ+VN ++AVRITH+PTG+ V
Sbjct: 155 HTSFVSCEVVPEL-DDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVV 213
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ KA++ LKAKL E++ +E+ ++RG+ + WG QIR+YVFHPY
Sbjct: 214 TCQSERSQIKNREKAMNMLKAKLYQKKLEEQQAELAELRGEQKEIGWGNQIRSYVFHPYS 273
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RT E ++ +VMDGE++ FI +YL+ K
Sbjct: 274 LVKDHRTNVEVGNVQAVMDGEIDVFIDAYLRAK 306
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 60 LTDVKDKINLLTDFKTKMDDA-VTIVKLTEEMD-STDAGLLEEAASIIKELNKALDQFEL 117
+ +KD + + + + D+ VT L EE D A L+EEA K+L K +FEL
Sbjct: 1 MNALKDLVEEFSSLEERFDNLEVTYELLKEEPDDELQAELVEEA----KKLMKDFSEFEL 56
Query: 118 TQLLSGPYDKEGAVISITAGAGGTDAQ 144
LL+ PYD+ A++ + GAGGT++Q
Sbjct: 57 QLLLNEPYDQNNAILELHPGAGGTESQ 83
>gi|374320752|ref|YP_005073881.1| peptide chain release factor 2 [Paenibacillus terrae HPL-003]
gi|357199761|gb|AET57658.1| peptide chain release factor 2 [Paenibacillus terrae HPL-003]
Length = 339
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +V+P + ++ +DV+I EDL+I RA G GGQ++N ++AVRITH+P+G+ V
Sbjct: 182 HTSFVSCDVVPEIVDD-VDVEIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPSGIVV 240
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A++ L++KL E++ ++ +IRG+ WG QIR+YVFHPY
Sbjct: 241 TCQNERSQIKNREQAMTMLRSKLYERKIEEQRQQLDEIRGEQSDIAWGSQIRSYVFHPYS 300
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDG+L+PFI YL+
Sbjct: 301 MVKDHRTSVETGNVGAVMDGDLDPFIDGYLR 331
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Query: 34 LAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT-EEMDS 92
+A E K A FWD+ +AQ + + VK ++ + + +DA + +L EE D
Sbjct: 2 IANFEEKMAAPDFWDDNDKAQAVIAEMNAVKSSVDSYEQLRQEYEDAGMMAELADEEGDE 61
Query: 93 TDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
T AG +E + I+ L L +FEL LL+ PYDK A++ + GAGGT++Q
Sbjct: 62 TLAGEIENS---IRSLLSKLQEFELQLLLNQPYDKLNAILELHPGAGGTESQ 110
>gi|389843547|ref|YP_006345627.1| peptide chain release factor 2 [Mesotoga prima MesG1.Ag.4.2]
gi|387858293|gb|AFK06384.1| peptide chain release factor 2 [Mesotoga prima MesG1.Ag.4.2]
Length = 370
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 182/367 (49%), Gaps = 71/367 (19%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEA----------Q 54
Y ++ ++ + IRA+ L++++++L E+E + +D S W+++ EA +
Sbjct: 4 YETNSRIQELKEKFDSIRATLDLERIDEKLKEIEKRMSDPSIWNDQREASNLGREAQSYR 63
Query: 55 ETLQALTDVKDKIN---------------------LLTDFKTKMDDAVTIVKLTEEMDST 93
T++ L DV+++ L+ + K+ + + L+ E D
Sbjct: 64 STIELLRDVEEEFESIEIAVELSGEDESYVKHVEELVRSAEKKVREFELTILLSGEYDIN 123
Query: 94 D--------AGLLE--EAASIIKELNKAL---DQFELTQLLSGPYDKEGAVISITAGAGG 140
+ AG E + AS++ + ++F++T + P +E + S+T G
Sbjct: 124 NCFISIHPGAGGTESQDWASMLMRMYMRWAEANRFKITIVDELP-GEEAGIKSVTINLAG 182
Query: 141 TDA-------------------------QTSFSGAEVMPLLPEESMDVQIPEEDLEISFS 175
A TSF+ V P + +E +++I EDL+I
Sbjct: 183 PHAYGKMKFEAGVHRLVRISPFDANHRRHTSFASVSVFPEM-DEVPEIEIRPEDLKIDTY 241
Query: 176 RAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRA 235
R+GG GGQ+VNK ++AVRITH+PTG+ V C ERSQ NK A+ L AKL I E++
Sbjct: 242 RSGGAGGQHVNKTDSAVRITHLPTGIVVACQTERSQHQNKANAMKMLYAKLFEIEIEKKR 301
Query: 236 SEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
SE ++ GD + WG QIR+YVF PY LVKD RT ET DI SVM+GE++ FI+ L +
Sbjct: 302 SEKLKLMGDQKEISWGNQIRSYVFQPYTLVKDHRTDFETGDIQSVMNGEIDEFIEKELLF 361
Query: 296 KYSMSLS 302
S+ S
Sbjct: 362 FSSIEKS 368
>gi|104773716|ref|YP_618696.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116513713|ref|YP_812619.1| protein chain release factor B [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|385815329|ref|YP_005851720.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|418029072|ref|ZP_12667620.1| hypothetical protein LDBUL1632_00414 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|418035446|ref|ZP_12673903.1| hypothetical protein LDBUL1519_00603 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|103422797|emb|CAI97438.1| Peptide chain release factor 2 (RF-2) [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|116093028|gb|ABJ58181.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|325125366|gb|ADY84696.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|354690435|gb|EHE90383.1| hypothetical protein LDBUL1519_00603 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|354690790|gb|EHE90732.1| hypothetical protein LDBUL1632_00414 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 332
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 109/155 (70%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P + ++S+++ I +DL I R+ G GGQ++NK +AVRITHIPTG+
Sbjct: 174 HTSFASVEVIPEV-DDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPTGIVT 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQ N+ A++ ++AKL + EE++ E ++G+ + WG QIR+YVFHPY
Sbjct: 233 TSQAQRSQFQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDIAWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RTG+ET+D+ VMDG+L+PFI +YL+++ S
Sbjct: 293 MVKDHRTGYETADVGGVMDGKLDPFIYAYLQWRLS 327
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FWDN+ +AQ+ + +K+K + K + D T ++L DA L ++
Sbjct: 2 AEPGFWDNQEKAQKLISETNLLKEKRDSFLALKKDLTDEETALELLRL--EADADLQKDT 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+ +L + Q+EL LLSG YD A++ I GAGGT+A
Sbjct: 60 EDQLAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAGGTEA 101
>gi|238923127|ref|YP_002936640.1| peptide chain release factor 2 in translation [Eubacterium rectale
ATCC 33656]
gi|238874799|gb|ACR74506.1| peptide chain release factor 2 in translation [Eubacterium rectale
ATCC 33656]
Length = 330
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 104/152 (68%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF +VMP + EE +D+++ +ED+ I R+ G GGQ++NK +A+RITH P+G+ V
Sbjct: 174 QTSFVSCDVMPDI-EEDLDIEVKDEDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK KA+ LKAKL ++ +E+ A++ IRG+ + WG QIR+YV PY
Sbjct: 233 QCQNERSQHMNKDKAMQMLKAKLYLLKQEENAAKEAGIRGEVKEIGWGSQIRSYVLQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
+VKD RT ET + +V+DG ++ FI YLK+
Sbjct: 293 MVKDHRTDVETGNADAVLDGNIDIFINGYLKW 324
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M+A D FWD+ ++Q ++ L +KD + K + +D T++++ E D L+
Sbjct: 1 MEAPD--FWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEMGYE--ENDESLI 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
E ++ + D + LLSG YDK A++ + AGAGGT++
Sbjct: 57 PEIQQMLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTES 101
>gi|317497043|ref|ZP_07955371.1| peptide chain release factor 2 [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895703|gb|EFV17857.1| peptide chain release factor 2 [Lachnospiraceae bacterium
5_1_63FAA]
Length = 333
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ +VMP + ++ ++V+I +ED+ I RA G GGQ++NK ++A+RITH+PTG+ V
Sbjct: 174 QTSFASCDVMPDIKDD-IEVEIADEDIRIDTYRASGAGGQHINKTDSAIRITHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK +A+ LK KL ++ ++Q ++ IRGD WG QIR+YV PY
Sbjct: 233 QCQNERSQHKNKDQAMKMLKTKLYLLKQQQHLEKLSDIRGDVGDNGWGNQIRSYVLQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
+VKD RT E+ + +V+DG+L+ F+ +YL +
Sbjct: 293 MVKDHRTNFESGNPSAVLDGDLDGFMNAYLAW 324
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Query: 45 SFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASI 104
FWDN E+Q ++ + +K + D KTK +D T++ + EE DA L+EEA ++
Sbjct: 5 GFWDNVEESQNVMKEVKSLKGVVEEYDDLKTKYEDIETLIDMAEE--DEDADLIEEATAL 62
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+ E K ++ ++ LL+G YDK+ A++++ AGAGGT++
Sbjct: 63 MDEFEKTYEELRISTLLTGEYDKDDAILTLHAGAGGTES 101
>gi|267847202|gb|ACJ79637.2| peptide chain release factor 2, programmed frameshift [Bacillus
cereus AH187]
Length = 380
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P +E ++++I EDL+I RA G GGQ+VN ++AVRITH PT V
Sbjct: 228 HTSFVSCEVVPEFNDE-VEIEIRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVV 286
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 287 TCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 346
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE++PFI +YL+
Sbjct: 347 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLR 377
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 82/140 (58%), Gaps = 6/140 (4%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+++E + R+ R S L EK++AELE K + FWD++ AQ + +KD
Sbjct: 21 IRQELEKMAKRLAAFRGSLYLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKD- 79
Query: 67 INLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ F+ ++D+ +++T E+ + D L EE S +K L + ++++EL LLS P
Sbjct: 80 --MVGSFR-QLDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDP 136
Query: 125 YDKEGAVISITAGAGGTDAQ 144
YDK A++ + GAGGT++Q
Sbjct: 137 YDKNNAILELHPGAGGTESQ 156
>gi|300813058|ref|ZP_07093436.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|313123317|ref|YP_004033576.1| bacterial peptide chain release factor 2 (brf-2) [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|300495899|gb|EFK31043.1| peptide chain release factor 2 [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|312279880|gb|ADQ60599.1| Bacterial peptide chain release factor 2 (BRF-2) [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 332
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 109/155 (70%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P + ++S+++ I +DL I R+ G GGQ++NK +AVRITHIPTG+
Sbjct: 174 HTSFASVEVIPEV-DDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPTGIVT 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQ N+ A++ ++AKL + EE++ E ++G+ + WG QIR+YVFHPY
Sbjct: 233 TSQAQRSQFQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDIAWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RTG+ET+D+ VMDG+L+PFI +YL+++ S
Sbjct: 293 MVKDHRTGYETADVGGVMDGKLDPFIYAYLQWRLS 327
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FWDN+ +AQ+ + +K+K + + + D T ++L DA L ++
Sbjct: 2 AEPGFWDNQEKAQKLISETNLLKEKRDSFLALEKDLTDEETALELLRL--EADADLQKDT 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+ +L + Q+EL LLSG YD A++ I GAGGT+A
Sbjct: 60 EDQLAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAGGTEA 101
>gi|167767702|ref|ZP_02439755.1| hypothetical protein CLOSS21_02237 [Clostridium sp. SS2/1]
gi|429761689|ref|ZP_19294105.1| peptide chain release factor 2 [Anaerostipes hadrus DSM 3319]
gi|167710441|gb|EDS21020.1| peptide chain release factor 2 [Clostridium sp. SS2/1]
gi|291558928|emb|CBL37728.1| bacterial peptide chain release factor 2 (bRF-2)
[butyrate-producing bacterium SSC/2]
gi|429183124|gb|EKY24193.1| peptide chain release factor 2 [Anaerostipes hadrus DSM 3319]
Length = 373
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ +VMP + ++ ++V+I +ED+ I RA G GGQ++NK ++A+RITH+PTG+ V
Sbjct: 214 QTSFASCDVMPDIKDD-IEVEIADEDIRIDTYRASGAGGQHINKTDSAIRITHLPTGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK +A+ LK KL ++ ++Q ++ IRGD WG QIR+YV PY
Sbjct: 273 QCQNERSQHKNKDQAMKMLKTKLYLLKQQQHLEKLSDIRGDVGDNGWGNQIRSYVLQPYT 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
+VKD RT E+ + +V+DG+L+ F+ +YL +
Sbjct: 333 MVKDHRTNFESGNPSAVLDGDLDGFMNAYLAW 364
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 82/137 (59%), Gaps = 2/137 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L+ + + + +E++ S L+ ++ + +LE+ + FWDN E+Q ++ + +K
Sbjct: 7 LKYKLNSFQEPLEDLSGSLALEAKKERIDQLELNMEEPGFWDNVEESQNVMKEVKSLKGV 66
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ D KTK +D T++ + EE DA L+EEA +++ E K ++ ++ LL+G YD
Sbjct: 67 VEEYDDLKTKYEDIETLIDMAEE--DEDADLIEEATALMDEFEKTYEELRISTLLTGEYD 124
Query: 127 KEGAVISITAGAGGTDA 143
K+ A++++ AGAGGT++
Sbjct: 125 KDDAILTLHAGAGGTES 141
>gi|217962667|ref|YP_002341241.1| peptide chain release factor 2 [Bacillus cereus AH187]
Length = 380
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P +E ++++I EDL+I RA G GGQ+VN ++AVRITH PT V
Sbjct: 228 HTSFVSCEVVPEFNDE-VEIEIRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVV 286
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 287 TCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 346
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE++PFI +YL+
Sbjct: 347 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLR 377
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 82/140 (58%), Gaps = 6/140 (4%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+++E + R+ R S L EK++AELE K + FWD++ AQ + +KD
Sbjct: 21 IRQELEKMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKD- 79
Query: 67 INLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ F+ ++D+ +++T E+ + D L EE S +K L + ++++EL LLS P
Sbjct: 80 --MVGSFR-QLDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDP 136
Query: 125 YDKEGAVISITAGAGGTDAQ 144
YDK A++ + GAGGT++Q
Sbjct: 137 YDKNNAILELHPGAGGTESQ 156
>gi|407002947|gb|EKE19587.1| hypothetical protein ACD_8C00135G0001 [uncultured bacterium]
Length = 306
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 77/153 (50%), Positives = 108/153 (70%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P++ EE +V I DL I RA G GGQ+VN ++AVRITH PTGV V
Sbjct: 151 QTSFAIVEVLPVI-EEISEVVISPTDLVIDTYRASGAGGQHVNTTDSAVRITHTPTGVVV 209
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQL NK +A+ LKA++ E++ E +++RG+ AEWG QIR+YV HPYK
Sbjct: 210 TCQSERSQLQNKEQAMKVLKARIHQKYLEKQKEEREKLRGEYKSAEWGSQIRSYVVHPYK 269
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT HE+SD V++G+L+ F++S+L+++
Sbjct: 270 MVKDHRTKHESSDPEKVLEGDLQDFMESFLRWQ 302
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
++++I L + K+ + + I+ L E ++ +E+ E+ K D E LL
Sbjct: 1 MRNEIASLESLEKKVAELIEIISLFGETENEQHAEIEKQ---FAEIQKEFDALEFKSLLG 57
Query: 123 GPYDKEGAVISITAGAGGTDAQ 144
G YDK +++I +GAGG DAQ
Sbjct: 58 GEYDKSDVILAIRSGAGGVDAQ 79
>gi|47567398|ref|ZP_00238111.1| peptide chain release factor 2 [Bacillus cereus G9241]
gi|47568468|ref|ZP_00239168.1| peptide chain release factor 2 [Bacillus cereus G9241]
gi|47569292|ref|ZP_00239977.1| peptide chain release factor 2 [Bacillus cereus G9241]
gi|222098640|ref|YP_002532698.1| peptide chain release factor 2 [Bacillus cereus Q1]
gi|228936472|ref|ZP_04099270.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228988409|ref|ZP_04148500.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229141914|ref|ZP_04270440.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST26]
gi|229158750|ref|ZP_04286808.1| Peptide chain release factor 2 [Bacillus cereus ATCC 4342]
gi|375287196|ref|YP_005107635.1| peptide chain release factor 2 [Bacillus cereus NC7401]
gi|423355664|ref|ZP_17333288.1| peptide chain release factor 2 [Bacillus cereus IS075]
gi|423375271|ref|ZP_17352608.1| peptide chain release factor 2 [Bacillus cereus AND1407]
gi|423572129|ref|ZP_17548342.1| peptide chain release factor 2 [Bacillus cereus MSX-A12]
gi|47554063|gb|EAL12429.1| peptide chain release factor 2 [Bacillus cereus G9241]
gi|47554859|gb|EAL13210.1| peptide chain release factor 2 [Bacillus cereus G9241]
gi|47556019|gb|EAL14357.1| peptide chain release factor 2 [Bacillus cereus G9241]
gi|221242699|gb|ACM15409.1| peptide chain release factor [Bacillus cereus Q1]
gi|228624734|gb|EEK81503.1| Peptide chain release factor 2 [Bacillus cereus ATCC 4342]
gi|228641529|gb|EEK97834.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST26]
gi|228771265|gb|EEM19740.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228823304|gb|EEM69138.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|358355723|dbj|BAL20895.1| bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus cereus
NC7401]
gi|401082016|gb|EJP90287.1| peptide chain release factor 2 [Bacillus cereus IS075]
gi|401092690|gb|EJQ00815.1| peptide chain release factor 2 [Bacillus cereus AND1407]
gi|401198685|gb|EJR05600.1| peptide chain release factor 2 [Bacillus cereus MSX-A12]
Length = 326
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P +E ++++I EDL+I RA G GGQ+VN ++AVRITH PT V
Sbjct: 174 HTSFVSCEVVPEFNDE-VEIEIRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE++PFI +YL+
Sbjct: 293 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLR 323
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 4 AGFWDDQQGAQAVINEANALKD---MVGSFR-QLDETFENLEITHELLKEEYDEDLHEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S +K L + ++++EL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 ESEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQ 102
>gi|283777745|ref|ZP_06344221.1| peptide chain release factor 2, programmed frameshift [Bacillus
cereus NVH0597-99]
gi|283645392|gb|EFC27417.1| peptide chain release factor 2, programmed frameshift [Bacillus
cereus NVH0597-99]
Length = 380
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P +E ++++I EDL+I RA G GGQ+VN ++AVRITH PT V
Sbjct: 228 HTSFVSCEVVPEFNDE-VEIEIRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVV 286
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 287 TCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 346
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE++PFI +YL+
Sbjct: 347 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLR 377
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 82/140 (58%), Gaps = 6/140 (4%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+++E + R+ R S L EK++AELE K + FWD++ AQ + +KD
Sbjct: 21 IRQELEKMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKD- 79
Query: 67 INLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ F+ ++D+ +++T E+ + D L EE S +K L + ++++EL LLS P
Sbjct: 80 --MVGKFR-QLDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDP 136
Query: 125 YDKEGAVISITAGAGGTDAQ 144
YDK A++ + GAGGT++Q
Sbjct: 137 YDKNNAILELHPGAGGTESQ 156
>gi|255004320|ref|ZP_05279121.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str.
Virginia]
Length = 255
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 106/155 (68%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV P+ ++ +D++I E+DL I RA G GGQ+VNK E+AVRITH+P+G+ V
Sbjct: 98 HTSFASVEVSPI-ADDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVV 156
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C RSQ N+ +A S L+++L + +++ ++ Q WG QIR+YV HPY+
Sbjct: 157 QCQTSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYR 216
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD+RTGHET D+ +V+DG+L+ FI + L YK S
Sbjct: 217 MVKDLRTGHETGDVDAVLDGDLDKFIAAALTYKLS 251
>gi|373253623|ref|ZP_09541741.1| peptide chain release factor 2 [Nesterenkonia sp. F]
Length = 372
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 116/173 (67%), Gaps = 14/173 (8%)
Query: 124 PYDKEGAVISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQ 183
P+D +G QTSF+ EV+PL+ E + V+I E +L+I R+ G GGQ
Sbjct: 205 PFDNQGR------------RQTSFAAVEVIPLI-EGTDHVEIDENELKIDVYRSSGPGGQ 251
Query: 184 NVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRG 243
+VN ++AVRITH+PTG V E+SQ+ N+ A+ L+++LL++ +++ A+E K++ G
Sbjct: 252 SVNTTDSAVRITHLPTGTVVAMQNEKSQIQNRAAAMRVLQSRLLLLKQQEEAAEKKELAG 311
Query: 244 DAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
D +KA WG QIR+YV HPY++VKD+RTGHE + ++ DG+L+ FI + ++++
Sbjct: 312 D-IKASWGDQIRSYVLHPYQMVKDLRTGHEVGNTSAIFDGDLDGFIDAGIRWR 363
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 72/117 (61%), Gaps = 2/117 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
+ +L ++AEL +AA W+++ AQ+ L+ + ++N LT ++++DD T+V++
Sbjct: 26 VDRLRADVAELSEQAAAPDLWNDQEHAQKVTSQLSHKQAELNRLTKLESRIDDVETMVEM 85
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+E DA L+EA I ++K L+ E+ LLSG YD+ AV++I AGAGG DA
Sbjct: 86 GQE--EGDAATLQEARDEISAISKDLESLEIVTLLSGEYDERDAVVTIRAGAGGIDA 140
>gi|422845304|ref|ZP_16892014.1| peptide chain release factor RF2 [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
gi|325684476|gb|EGD26640.1| peptide chain release factor RF2 [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 332
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 109/155 (70%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P + ++S+++ I +DL I R+ G GGQ++NK +AVRITHIPTG+
Sbjct: 174 HTSFASVEVIPEV-DDSIEIDIDPKDLRIDVYRSSGAGGQHINKTSSAVRITHIPTGIVT 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQ N+ A++ ++AKL + EE++ E ++G+ + WG QIR+YVFHPY
Sbjct: 233 TSQAQRSQFQNRDTAMNEMRAKLFHLEEEKKRKEKAALKGEQLDIAWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RTG+ET+D+ VMDG+L+PFI +YL+++ S
Sbjct: 293 MVKDHRTGYETADVGGVMDGKLDPFIYAYLQWRLS 327
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FWDN+ +AQ+ + +K+K + + + D T ++L DA L ++
Sbjct: 2 AEPGFWDNQEKAQKLISETNLLKEKRDSFLALEKDLTDEETALELLRL--EADADLQKDT 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+ +L + Q+EL LLSG YD A++ I GAGGT+A
Sbjct: 60 EDQLAKLQEEFHQYELNLLLSGEYDDHNALMEIHPGAGGTEA 101
>gi|210631232|ref|ZP_03296815.1| hypothetical protein COLSTE_00700 [Collinsella stercoris DSM 13279]
gi|210160119|gb|EEA91090.1| peptide chain release factor 2 [Collinsella stercoris DSM 13279]
Length = 376
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 109/153 (71%), Gaps = 2/153 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QT+F+G EV+P+LP++ +++++ +D+ + A G GGQ VN ++AVR+THIPTG+ V
Sbjct: 219 QTTFAGVEVIPVLPDD-IEIEVAPDDIRVDVYHASGPGGQGVNTTDSAVRVTHIPTGIVV 277
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ NK + LKA+L + E+RA + +IRG + +G QIR+YV +PY+
Sbjct: 278 TCQNERSQIQNKAACMQILKARLYELELEKRAETLDEIRGPKTEIGFGNQIRSYVLYPYQ 337
Query: 264 LVKDVRTGHETSDIVSVM-DGELEPFIKSYLKY 295
+VKD+R+G ETS++ SV+ DG+L+PFI Y ++
Sbjct: 338 MVKDLRSGVETSNVDSVLEDGDLDPFIIGYHRW 370
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 74/135 (54%)
Query: 10 DVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINL 69
++EA S R+ E+ A +++ + ELE +A FWD+ A+ + L VK + L
Sbjct: 13 ELEALSARLTEVEAYLHIEEARGRVTELEEASAAPGFWDDAEAARAYMAELAQVKGDVGL 72
Query: 70 LTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEG 129
+ ++ DA ++L +EM A + EAA+ +EL +A+D+ EL+ +G +D
Sbjct: 73 VDRAHERLSDARAALELADEMGQDGAEFIAEAAAAAEELTRAIDEMELSSWFTGEFDHGS 132
Query: 130 AVISITAGAGGTDAQ 144
A++SI G GG +AQ
Sbjct: 133 AILSIKPGQGGLEAQ 147
>gi|410458996|ref|ZP_11312750.1| peptide chain release factor 2 [Bacillus azotoformans LMG 9581]
gi|409930702|gb|EKN67697.1| peptide chain release factor 2 [Bacillus azotoformans LMG 9581]
Length = 327
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 107/155 (69%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP EE +++++ + DL+I R+ G GGQ++N ++AVRITH+PTG+ V
Sbjct: 174 HTSFVSCDVMPEFNEE-IEIEVRDADLKIDTYRSTGAGGQHINTTDSAVRITHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQSERSQIKNREQAMKMLKAKLYQKKIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKD RT E + +V+DGE++PFI +YL+ + S
Sbjct: 293 LVKDHRTNVEIGNTQAVVDGEIDPFIDAYLRSRLS 327
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 45 SFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDD-AVTIVKLTEEMDSTDAGLLEEAAS 103
+FWD++ AQ+ + +KD + T D+ VT L EE D L +E
Sbjct: 5 NFWDDQQAAQQVINETNALKDIVGEYTALNESFDNLEVTHELLKEEYDED---LQKELEK 61
Query: 104 IIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
IK L++++ QFEL LLS PYDK A++ + GAGGT++Q
Sbjct: 62 EIKTLSESVSQFELQLLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|423573165|ref|ZP_17549284.1| peptide chain release factor 2 [Bacillus cereus MSX-D12]
gi|401215563|gb|EJR22279.1| peptide chain release factor 2 [Bacillus cereus MSX-D12]
Length = 325
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P +E ++++I EDL+I RA G GGQ+VN ++AVRITH PT V
Sbjct: 173 HTSFVSCEVVPEFNDE-VEIEIRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVV 231
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 232 TCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 291
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE++PFI +YL+
Sbjct: 292 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLR 322
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 3 AGFWDDQQGAQAVINEANALKD---MVGSFR-QLDETFENLEITHELLKEEYDEDLHEEL 58
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S +K L + ++++EL LLS PYDK A++ + GAGGT++Q
Sbjct: 59 ESEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQ 101
>gi|387779889|ref|YP_005754687.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
LGA251]
gi|344176991|emb|CCC87455.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
LGA251]
Length = 369
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 104/151 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH P+G+ V
Sbjct: 213 HTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 273 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYS 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 333 MVKDHRTNEETGKVDAVMDGDIGPFIESYLR 363
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 72/138 (52%), Gaps = 2/138 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
++++++ + + +IR S L+ E + E E A+ +FWDN+ +AQ+ + +K
Sbjct: 6 IKRNIDKYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAI 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+N + ++DD L +E D + E+ + +D++EL LL GP+D
Sbjct: 66 VNGYKALQAEVDDMDATWDLLQE--EFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHD 123
Query: 127 KEGAVISITAGAGGTDAQ 144
A++ + GAGGT++Q
Sbjct: 124 ANNAILELHPGAGGTESQ 141
>gi|16801714|ref|NP_471982.1| peptide chain release factor 2 [Listeria innocua Clip11262]
gi|16415189|emb|CAC97879.1| prfB [Listeria innocua Clip11262]
Length = 327
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L +E +++++ EDL+I RA G GGQ++N ++AVR+THIP+G+ V
Sbjct: 174 HTSFVSVDVMPELDDE-IEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQL N+ +A+ LK KL +E++ E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 293 MVKDHRTNYETGNIQAVMDGDLDDFINAYLR 323
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
D +FW+++ AQ+ + K+ + + + ++L +E D L E
Sbjct: 3 DPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE--EADEDLQAELE 60
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
IK + +FEL +LS PYDK A++ + GAGGT++Q
Sbjct: 61 KDIKAYVATISEFELKLMLSDPYDKNNAILELHPGAGGTESQ 102
>gi|282848898|ref|ZP_06258288.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745]
gi|282581403|gb|EFB86796.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745]
Length = 330
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 112/158 (70%), Gaps = 1/158 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP + ++++++ I +D+++ RA G GGQ++NK ++AVR+TH PTG+ V
Sbjct: 174 HTSFAAVDVMPEI-DDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C +RSQ+ N+ +AL L+AKL + E++A +QI G EWG QIR+YVFHPY
Sbjct: 233 QCQTQRSQMQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYN 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSL 301
LVKD RT ET ++ +VMDG L+PF++ +LK + ++++
Sbjct: 293 LVKDHRTSVETGNVQAVMDGNLDPFVEGFLKKEANLTI 330
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+D +FWDN +A+E Q T +K+ + + ++DA ++++ +D D + E
Sbjct: 2 SDPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANMMLEMA--IDEDDLSMESEI 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+K++ + L++ E+ LLSG YD A+++ AGAGGT+AQ
Sbjct: 60 KEYVKQIEETLEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQ 102
>gi|295697362|ref|YP_003590600.1| hypothetical protein [Kyrpidia tusciae DSM 2912]
gi|295412964|gb|ADG07456.1| hypothetical protein Btus_2812 [Kyrpidia tusciae DSM 2912]
Length = 382
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 107/158 (67%), Gaps = 1/158 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P L +ES+DV I EDL+I R+ G GGQ+VN ++AVRITHIPTG+ V
Sbjct: 215 HTSFASVDVLPEL-DESVDVDIRPEDLKIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVV 273
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ L A+L ++ +I +RG+ + WG QIR+YVFHPY
Sbjct: 274 TCQSERSQIKNRATAMKILAARLYERRRREQEEQIAALRGEQKEIAWGSQIRSYVFHPYS 333
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSL 301
+VKD RTG ET ++ +VMDG+++ FI ++L+ + + L
Sbjct: 334 MVKDHRTGVETGNVQAVMDGDIDAFIDAWLRQRAAAQL 371
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 83/143 (58%), Gaps = 2/143 (1%)
Query: 2 QDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALT 61
Q F LR+ + +R++EI S L +K++A +E + A + FWD++ AQ+ + +
Sbjct: 3 QTFGELRQALHDLVERLDEIGRSLDLAGKKKQIAGMEQRMAAADFWDDQEGAQKVIAEVN 62
Query: 62 DVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLL 121
+KD + + +++++D + +L E D +L E + I +++ L QFEL +L
Sbjct: 63 RLKDVVERVEGLRSRVEDLEVLWELGHE--EGDETVLGEIEAGITQVHSQLGQFELELML 120
Query: 122 SGPYDKEGAVISITAGAGGTDAQ 144
SGPYD+ A++ + GAGGT++Q
Sbjct: 121 SGPYDRNNAIVELHPGAGGTESQ 143
>gi|415727369|ref|ZP_11471467.1| peptide chain release factor 2 [Gardnerella vaginalis 00703Dmash]
gi|388062266|gb|EIK84884.1| peptide chain release factor 2 [Gardnerella vaginalis 00703Dmash]
Length = 380
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 113/160 (70%), Gaps = 2/160 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QT FS EV+PL+ E + + IP+ D+ + +A G GGQ VN +AVRITH+PTG+ V
Sbjct: 213 QTGFSAVEVIPLV-EATDHIDIPDSDIRVDTFQASGPGGQGVNTTYSAVRITHLPTGLVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ERSQ+ N+ A++ L+++LLV+ + A++ K++ GD +KA WG Q+R+YV HPY+
Sbjct: 272 SMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGD-IKASWGDQMRSYVLHPYQ 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 303
+VKD+RTG+ETS +V DG+++ FI++ +++++ + A
Sbjct: 331 MVKDLRTGYETSQTQAVFDGDIDGFIEAGIRWRHEQRVEA 370
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF +DVE+ + I + + L+ +A+LE +AA+ WD+ AQ+ L+
Sbjct: 5 DFAQALRDVES---KYASIEKALDVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ ++ L ++DD T+++L +E DA + EA + + LD E+ LL
Sbjct: 62 AQSQLKRLQAVDQRIDDTKTLIELGQE--EGDADSMSEAQDELGNIAHELDDMEVQTLLD 119
Query: 123 GPYDKEGAVISITAGAGGTDA 143
G YD AV++I +GAGG DA
Sbjct: 120 GEYDARSAVVTIRSGAGGVDA 140
>gi|291544247|emb|CBL17356.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus
champanellensis 18P13]
Length = 375
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 140/248 (56%), Gaps = 29/248 (11%)
Query: 52 EAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKA 111
EAQ+ Q L + ++ DFK V L + +D +AGL ++AS++ E A
Sbjct: 140 EAQDWAQMLYRMYNRWAERHDFK---------VSLLDYLDGDEAGL--KSASMLVEGQNA 188
Query: 112 LDQFE----LTQLLS-GPYDKEGAVISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIP 166
+ + +L+ P+D G TSF+ EVMP + ++SM+V I
Sbjct: 189 YGFLKSEAGVHRLVRVSPFDASGR------------RHTSFAALEVMPEI-DDSMEVDIR 235
Query: 167 EEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKL 226
ED+++ R+ G GGQ++NK +AVR+THIPTG+ V C +RSQ N+ A+ L++KL
Sbjct: 236 LEDVKMDVFRSSGAGGQHINKTSSAVRLTHIPTGIVVSCQTQRSQFQNRDFAMKMLRSKL 295
Query: 227 LVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELE 286
+ I E + +I I+G + WG QIR+YVF PY L KD RTG E +I +VMDG+L+
Sbjct: 296 VEIKEREHLEKISDIKGVQKEIAWGAQIRSYVFMPYTLAKDHRTGFENGNISAVMDGDLD 355
Query: 287 PFIKSYLK 294
FI +YLK
Sbjct: 356 GFINAYLK 363
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 67/116 (57%), Gaps = 6/116 (5%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT--E 88
+ EL +L ++ FWD+ ++Q+ +Q + +++ ++ K++D + ++ L E
Sbjct: 31 QSELDDLRIQVTYDGFWDDAEKSQKVMQKIRKLENTVDKFRHLNQKLEDTIALIDLCMEE 90
Query: 89 EMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ DS++ +L++ S +EL +L+ LL+G YD A+++ AGAGGT+AQ
Sbjct: 91 DDDSSNEEILQDVESFKEELEAE----KLSTLLTGEYDGSNAILTFHAGAGGTEAQ 142
>gi|294786673|ref|ZP_06751927.1| peptide chain release factor 2 [Parascardovia denticolens F0305]
gi|420237326|ref|ZP_14741797.1| peptide chain release factor 2 [Parascardovia denticolens IPLA
20019]
gi|294485506|gb|EFG33140.1| peptide chain release factor 2 [Parascardovia denticolens F0305]
gi|391879597|gb|EIT88103.1| peptide chain release factor 2 [Parascardovia denticolens IPLA
20019]
Length = 377
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 114/155 (73%), Gaps = 4/155 (2%)
Query: 144 QTSFSGAEVMPLL-PEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVT 202
QTSF+ EV+PL+ P + +DV P+ D+ + + G GGQ VN +AVR+TH+PTG+
Sbjct: 213 QTSFAAVEVIPLVEPTDHIDV--PDSDVRVDTYMSHGPGGQGVNTTYSAVRLTHLPTGIV 270
Query: 203 VRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPY 262
V +ERSQ+ N+ A++ L+++LLV+ +E+ A++ K++ GD +KA WG Q+R+YV HPY
Sbjct: 271 VTMQDERSQIQNRAAAMAVLQSRLLVLKQEEEAAKKKELAGD-IKASWGDQMRSYVLHPY 329
Query: 263 KLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKY 297
++VKD+RTG+ETSD +V DG+++ FI + +++++
Sbjct: 330 QMVKDLRTGYETSDPQAVFDGDIDGFIDAGIRWRH 364
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
Y+ +D+ A + E I + GL L ++AELE +A+ WD+ AQ L+ +
Sbjct: 4 YDFTQDLGEARSKYETITQAVGLDSLRGKIAELEKQASAPGLWDDPETAQRVTSNLSASQ 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
+ LT+ ++DD T+ L E + D+ +EA S +K+L+K L E+ LL G
Sbjct: 64 AEYKRLTEAGQRLDDIDTLYSLGMEEEDEDSK--QEAWSELKKLSKDLSDIEIQTLLDGE 121
Query: 125 YDKEGAVISITAGAGGTDA 143
YD AV++I +GAGG DA
Sbjct: 122 YDNRAAVVTIRSGAGGVDA 140
>gi|441500566|ref|ZP_20982723.1| Peptide chain release factor 2 [Fulvivirga imtechensis AK7]
gi|441435717|gb|ELR69104.1| Peptide chain release factor 2 [Fulvivirga imtechensis AK7]
Length = 331
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 113/163 (69%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ G TSF+ V P++ ++ ++++I D++ SR+GG GGQNVNKVET
Sbjct: 161 LVRISPFDSGGRRHTSFASVYVYPIV-DDDIEIEINPGDIDFHTSRSGGAGGQNVNKVET 219
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
V++TH PTG+ + C ERSQLAN+ +A+ LK++L + E+R +E +I +K ++
Sbjct: 220 KVQLTHKPTGIVIVCQVERSQLANRERAMKMLKSRLYQMEIEKRNAERDKIESSKMKIDF 279
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYV HPYKL+KD RTG E +D+ +V+DG+L+ +IK++L
Sbjct: 280 GSQIRNYVLHPYKLIKDARTGVERTDVQNVLDGDLDDYIKAFL 322
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M A FWDN EA++ L+ + K + M+D T+ + +E + +D +
Sbjct: 1 MVTAQPGFWDNPVEAEKVLKEIRAKKIWTESFAEVHQLMEDLETLNEFYQEEEVSDEDMD 60
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+E A + KA+++ E ++LSG D+ GA++ I GAGGT++Q
Sbjct: 61 KEYA----KTKKAIEELEFKKMLSGEEDQLGAMLEINPGAGGTESQ 102
>gi|406669892|ref|ZP_11077154.1| peptide chain release factor 2 [Facklamia ignava CCUG 37419]
gi|405581655|gb|EKB55670.1| peptide chain release factor 2 [Facklamia ignava CCUG 37419]
Length = 327
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 112/165 (67%), Gaps = 1/165 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
+I I+ + TSF+ EV P++ E S++++I +DL I RA G GGQ++NK ++
Sbjct: 161 LIRISPFDSNSRRHTSFASVEVTPII-EHSIELEIMPDDLRIDTYRASGAGGQHINKTDS 219
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PTG+ + ERSQ+ N+ +ALS LKAKL +++A ++ +I+G+ W
Sbjct: 220 AVRITHLPTGIVTQSQSERSQIQNREQALSLLKAKLYQRQLDEQAEQLAEIKGEQKDNAW 279
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
G QIR+YVFHPY +VKD RT +E + VMDGE++ F+++YLK+
Sbjct: 280 GSQIRSYVFHPYSMVKDHRTSYEIGNADKVMDGEIDDFVEAYLKW 324
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FWD+ AQ+ Q L K+++ + + + ++L E + D L +E
Sbjct: 3 EPTFWDDNEHAQQVTQQLNHEKERLAQIEGLIDQYSEVECGLELYRE--TQDQELYQEVE 60
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
++I L++ +++FE +LLSG YD A++ I GAGGT++Q
Sbjct: 61 TMIHTLSQQVERFETARLLSGEYDSNDAILEIHPGAGGTESQ 102
>gi|170782441|ref|YP_001710774.1| chain release factor 2 [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157010|emb|CAQ02182.1| chain release factor 2 [Clavibacter michiganensis subsp.
sepedonicus]
Length = 367
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 111/155 (71%), Gaps = 2/155 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+PL+ E++ ++IPE D+ + R+ G GGQ+VN ++AVRITH+PTG+ V
Sbjct: 211 QTSFAAVEVVPLI-EQTESIEIPENDMRVDVFRSSGPGGQSVNTTDSAVRITHLPTGIVV 269
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C E+SQ+ N+ AL L+++LL++ EQ A+ K++ G+ + A WG Q+R+YV PY+
Sbjct: 270 TCQNEKSQIQNRAAALRVLQSRLLLVQREQEAATKKELAGN-ITASWGDQMRSYVLAPYQ 328
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD+RT HE ++ +V DG+L+ FI + ++++ S
Sbjct: 329 MVKDLRTEHEVNNPSNVFDGDLDGFISAGIRWRKS 363
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
D IR+ G+++L++E+ EL +A + WD+ +AQ+ L+ + ++ + + +
Sbjct: 15 DTYSNIRSVIGVERLQQEVEELSAQAGEPDLWDDTEKAQKVTSDLSHRQSELKRIDELQR 74
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
++DD +V EM D EEA + + K +D+ E+ LL+G +D AV++I
Sbjct: 75 RLDDLDVLV----EMAKDDEESAEEAVVELAGITKIMDELEVQTLLNGEFDPRPAVVTIR 130
Query: 136 AGAGGTDA 143
AGAGG DA
Sbjct: 131 AGAGGVDA 138
>gi|297568438|ref|YP_003689782.1| hypothetical protein DaAHT2_0457 [Desulfurivibrio alkaliphilus
AHT2]
gi|296924353|gb|ADH85163.1| conserved hypothetical protein [Desulfurivibrio alkaliphilus AHT2]
Length = 368
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 108/166 (65%), Gaps = 1/166 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ G TSF+ + P L +++++V+I ++DL I RA G GGQ+VNK +
Sbjct: 203 LVRISPFDTGGRRHTSFASVFIFPEL-DDNIEVEINDKDLRIDTYRASGAGGQHVNKTSS 261
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
A+RITH+P+G+ V+C ERSQ NK A+ LKA+L R E + + GD + W
Sbjct: 262 AIRITHLPSGIVVQCQNERSQHRNKDTAMKMLKAQLYERERANRKEEQQHLHGDKKEIAW 321
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
G QIR+YV PY+LVKD RT HET ++ +V+DG+L+PFI SYL ++
Sbjct: 322 GSQIRSYVLQPYRLVKDHRTNHETGNVDNVLDGDLDPFIISYLLWQ 367
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L++ E R++ +R+ L + ELE ++A +FWDN A + +D++D
Sbjct: 9 LKEKAENLQGRLQTLRSHLDLDNKLLRIQELEHRSAAPNFWDNPEAAAGVQKEQSDLQDT 68
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
I+ +DA +++L + D +E + + + + L EL + +G +D
Sbjct: 69 IDNWQQVIDSFEDAEVLLELA--IAENDHETEQEVSRALNSVEQRLAAMELECMFNGEHD 126
Query: 127 KEGAVISITAGAGGTDAQ 144
A+++I AGAGGT+AQ
Sbjct: 127 ASNAMLTIHAGAGGTEAQ 144
>gi|408829971|ref|ZP_11214861.1| peptide chain release factor 2 [Streptomyces somaliensis DSM 40738]
Length = 368
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 110/153 (71%), Gaps = 2/153 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EV+P++ E++ ++IPE DL I R+ G GGQ+VN ++AVRITHIPTGV V
Sbjct: 213 QTSFAGVEVLPVV-EQTDHIEIPENDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGVVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C E+SQ+ NK A+ L+A+LL ++ +++ ++GD + WG Q+R+YV HPY+
Sbjct: 272 SCQNEKSQIQNKASAMRVLQARLLERQRQEERAKMDALKGDG-GSSWGNQMRSYVLHPYQ 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD+RT HE + +V+DGE++ F+++ ++++
Sbjct: 331 MVKDLRTEHEVGNPQAVLDGEIDAFLEAGIRWR 363
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
I A L ++ ++A LE +AA S WD+ AQ+ L+ ++ ++ + ++DD
Sbjct: 20 IEAVLDLDKMRADIAVLEEQAAAPSLWDDPEAAQKITSRLSHLQAEVRKAETLRGRIDDL 79
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
+ +L E D D L EA + + + KALD+ E+ LLSG YD+ A+++I A AGG
Sbjct: 80 AVLFELAEAEDDPDT--LAEAEAELAAVRKALDEMEVRTLLSGEYDEREALVTIRAEAGG 137
Query: 141 TDA 143
DA
Sbjct: 138 VDA 140
>gi|57234653|ref|YP_181313.1| peptide chain release factor 2, programmed frameshift, partial
[Dehalococcoides ethenogenes 195]
gi|57225101|gb|AAW40158.1| peptide chain release factor 2, programmed frameshift
[Dehalococcoides ethenogenes 195]
Length = 362
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 104/151 (68%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EVMP E+S+D+ I ED++I R+ G GGQNV KV TAVR+THIP+G+ V
Sbjct: 206 HTSFALVEVMPE-AEDSVDIDIKPEDIKIDMFRSSGPGGQNVQKVSTAVRVTHIPSGIVV 264
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ N+ A+ L +KLL + +RA E +I+G+ + AEWG QIR+YV HPYK
Sbjct: 265 ASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKIKGERISAEWGNQIRSYVLHPYK 324
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT +E + +V++GEL+ FI +YL+
Sbjct: 325 MVKDHRTDYEVGNAEAVLEGELDGFINAYLR 355
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
E E+ ELE +A FW ++ AQ+ ++ L K + + +++D + + LT E
Sbjct: 25 ELEITELESASASPDFWQDQQNAQKAMKKLAANKRVSEVWRGLEQRVNDLLELFALTHE- 83
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D L E + L +D E+ SG YD A++++ AGAGG ++Q
Sbjct: 84 ---DPSLGNEIEREVNTLTAEIDTLEVGLAFSGQYDSRNALLTVHAGAGGVESQ 134
>gi|238926688|ref|ZP_04658448.1| peptide chain release factor RF2 [Selenomonas flueggei ATCC 43531]
gi|238885445|gb|EEQ49083.1| peptide chain release factor RF2 [Selenomonas flueggei ATCC 43531]
Length = 368
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS +VMP + +++++V I +D+ + + RA G GGQ++NK +AVR+TH PTG+ V
Sbjct: 212 HTSFSACDVMPEI-DDAVEVPINMDDVRVDYYRASGAGGQHINKTSSAVRMTHEPTGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL NK + + L+AKL + +E++ EI ++ G K EWG QIR+YVF PY
Sbjct: 271 QCQNERSQLQNKEQCMKMLRAKLFELEQEKKEEEIAKLEGVQQKIEWGSQIRSYVFQPYT 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKDVRT ET ++ +VMDGE++PFI++YL K
Sbjct: 331 MVKDVRTNAETGNVQAVMDGEIDPFIRAYLNAK 363
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 82/139 (58%), Gaps = 2/139 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L+ + ++++++R S + E+++AELE K + SFWD+ A AQ+ Q L D+K
Sbjct: 4 DLKPTLNDLGEKLDQMRISLEIPAKEEKIAELEYKMGEPSFWDDAAAAQKLNQELADLKG 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ K +DA T+ ++ ++ DA + ++ + + + + L+ +L LLSG Y
Sbjct: 64 GVDTYKGLMAKYEDAETLYEMG--IEEGDASMEDDIRAELDLITEGLETLQLEVLLSGDY 121
Query: 126 DKEGAVISITAGAGGTDAQ 144
D A++++ AGAGGT+AQ
Sbjct: 122 DANNAILTLHAGAGGTEAQ 140
>gi|99035041|ref|ZP_01314835.1| hypothetical protein Wendoof_01000330 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 336
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V P++ E+S+D+ + E+DL+I RA G GGQ+VNK E+AVRITHIPTGV V
Sbjct: 184 HTSFASVGVTPVI-EDSIDIAVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVVV 242
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C RSQ NK +AL LK +L I E++ ++ + G WG QIR+YV HPY+
Sbjct: 243 QCQNGRSQHRNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGNQIRSYVMHPYQ 302
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD+RTGHE +I SV DG ++ FI S L
Sbjct: 303 MVKDLRTGHEVGNINSVFDGNIDCFIVSVL 332
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 34 LAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDST 93
L EL+ +A++ W + +AQE L+ + +K+ + ++ +DA++++K +D
Sbjct: 3 LEELDSQASNDDLWQDNQKAQEVLKERSKIKNDVESFLKLESDYNDAISLMKSA--IDEN 60
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D E + + +L K + E L +G D + I +GAGGT++
Sbjct: 61 DEEFFSEVENELAKLEKLIKYKETESLFTGEADNNNCFLEIHSGAGGTESN 111
>gi|339624364|ref|ZP_08660153.1| peptide chain release factor 2 [Fructobacillus fructosus KCTC 3544]
Length = 372
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 110/156 (70%), Gaps = 1/156 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++S++V++ ++D+++ R+GG GGQNVNKV T VR+TH PTG+ V
Sbjct: 214 HTSFVSVDVMPEL-DDSIEVEVRDDDIKMDVFRSGGAGGQNVNKVSTGVRLTHEPTGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T ER+Q N+ A+ LKAKL + E++ +E + G+ + WG QIR+YV HPY+
Sbjct: 273 SSTVERTQYGNRDYAMRLLKAKLYQMELEKKEAERAALAGEKKENGWGSQIRSYVLHPYQ 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSM 299
+VKD RTG+ET+ V+DG+L+PFI +YL+++ ++
Sbjct: 333 MVKDHRTGYETNQPQDVLDGDLDPFINAYLQWQLAL 368
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L L +E+A+ E + + FWD++ +AQ + +K + + D+ ++++
Sbjct: 26 LDALTEEIADFENQMTEPGFWDDQQKAQGVIDETNVLKKRRDSFLALGEAADEIEMLIEI 85
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
E D D EE ++++ A+ + L QLL+G YD A++ I G+GGT++
Sbjct: 86 VSE-DPEDTDSAEELGQLVEKTQDAVQAYNLEQLLTGEYDANNAILEIHPGSGGTES 141
>gi|295115079|emb|CBL35926.1| bacterial peptide chain release factor 2 (bRF-2)
[butyrate-producing bacterium SM4/1]
Length = 333
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF +VMP + E+ +DV++ ++L I R+ G GGQ++NK +A+RITH+PTG+ V
Sbjct: 174 QTSFVSCDVMPDIKED-LDVEVNPDELRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK A+ LK KL ++ +E+ A ++ IRGD +G QIR+YV PY
Sbjct: 233 QCQNERSQFQNKEVAMQMLKTKLYMMKQEEHAEKLSDIRGDVKDINFGNQIRSYVMQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
LVKD RTG E+ ++ +V+DG+++ FI +YLK+
Sbjct: 293 LVKDHRTGAESGNVNAVLDGDIDLFISAYLKW 324
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ + ++ ++KD + + + +D ++++ E D L+ E ++
Sbjct: 6 FWDDPEMSTRLMREAKNLKDTVESYRKLEQEYEDIQVMLEMGYE--ENDPSLIPEIQGMM 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+ + L+ + LLSG YD A++ + AGAGGT+A
Sbjct: 64 DDFVEKLEAIRIQTLLSGEYDNNNAILKLNAGAGGTEA 101
>gi|375010251|ref|YP_004983884.1| peptide chain release factor 2 [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|359289100|gb|AEV20784.1| Peptide chain release factor 2 [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 327
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P + +++++++I E+L+I R+ G GGQ+VN ++AVRITH+PTG+ V
Sbjct: 174 HTSFVSCEVVPEM-DDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ KA++ LKAKL E++ +E+ ++RG+ + WG QIR+YVFHPY
Sbjct: 233 TCQSERSQIKNREKAMNMLKAKLYQKKLEEQQAELAELRGEQKEIGWGNQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RT E ++ +VMDGE++ FI +YL+ K
Sbjct: 293 LVKDHRTNVEVGNVQAVMDGEIDVFIDAYLRAK 325
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDD-AVTIVKLTEEMD-STDAGLLE 99
A +FWD++ AQ + + +KD + + + + D+ VT L EE D A L+E
Sbjct: 2 AAPNFWDDQKAAQAVISEVNALKDLVEEFSSLEERFDNLEVTYELLKEEPDDELQAELVE 61
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EA K+L K +FEL LL+ PYD+ A++ + GAGGT++Q
Sbjct: 62 EA----KKLMKDFSEFELQLLLNEPYDQNNAILELHPGAGGTESQ 102
>gi|386772748|ref|ZP_10095126.1| peptide chain release factor 2 [Brachybacterium paraconglomeratum
LC44]
Length = 371
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 177/338 (52%), Gaps = 74/338 (21%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L+K++A+LE +A+ WD+ AQ+ AL+ + + +++ ++++D +V+L E
Sbjct: 29 LDKKIADLEKQASAQDLWDDVENAQKVSSALSHAQSERRRISELASRIEDLEVMVELAAE 88
Query: 90 MDSTD--AGLLEEAASIIKELNK----------------------------ALDQFEL-- 117
D D A E SI K L++ A D E+
Sbjct: 89 EDDPDTLAEAEAEVVSIHKTLDELEVRTLLSGEYDERDAVITIRAGAGGVDAADFAEMLM 148
Query: 118 -------------TQLLSGPYDKEGAVISIT---AGA---------GGTDA--------- 143
T+++ Y +E + S+T AG GGT
Sbjct: 149 RMYLRWAENNGYSTKVMDTSYAEEAGLKSVTFEVAGPFAYGTLSVEGGTHRLVRISPFDN 208
Query: 144 ----QTSFSGAEVMPLLPEESMD-VQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 198
QTSF+ EV+PL+ ES D ++IPE DL+I R+ G GGQ+VN ++AVR+TH+P
Sbjct: 209 QGRRQTSFAAVEVIPLI--ESTDHIEIPENDLKIDVFRSSGPGGQSVNTTDSAVRMTHLP 266
Query: 199 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 258
TG V +E+SQ+ N+ AL ++++LL++ + + A+E K++ GD VKA WG Q+R+YV
Sbjct: 267 TGTVVSMQDEKSQIQNRAAALRVMQSRLLLLKKAEEAAERKELAGD-VKASWGDQMRSYV 325
Query: 259 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+PY++VKD+RT ++ + SV DGE+ FI + ++++
Sbjct: 326 LNPYQMVKDLRTEYQEGNPSSVFDGEISGFIDAGIRWR 363
>gi|417904612|ref|ZP_12548434.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21269]
gi|341846518|gb|EGS87710.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21269]
Length = 331
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 104/151 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH P+G+ V
Sbjct: 175 HTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 235 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYS 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 295 MVKDHRTNEETGKVDAVMDGDIGPFIESYLR 325
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ +FWDN+ +AQ+ + +K +N + ++DD L +E D + E+
Sbjct: 3 AEPNFWDNQTKAQDIIDKNNALKAIVNGYKALQAEVDDMDATWDLLQE--EFDEEMKEDL 60
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +D++EL LL GP+D A++ + GAGGT++Q
Sbjct: 61 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQ 103
>gi|406884797|gb|EKD32138.1| hypothetical protein ACD_77C00170G0004 [uncultured bacterium]
Length = 311
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 104/150 (69%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QT+FS V P + ++++ ++I DLE R+GG GGQNVNKVET VR+ H+PTG+TV
Sbjct: 158 QTTFSSVYVYPAV-DDTITIEINPGDLEWDTFRSGGAGGQNVNKVETGVRVRHLPTGITV 216
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
TE RSQL N+ A+ LK+ L + +R + ++ G +K EWG QIR+YV HPYK
Sbjct: 217 ENTESRSQLDNRANAMRILKSHLYELELRKRKEKEAELEGKKLKIEWGSQIRSYVLHPYK 276
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD+RTG ETSD +V+DG++ F++S+L
Sbjct: 277 MVKDLRTGCETSDTQAVLDGDINEFMRSFL 306
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 57 LQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFE 116
L+ ++ +K + ++ + ++D + ++ ++E DS DA E KEL K LD E
Sbjct: 3 LKKVSILKFWVKGFSEIEKSLEDLIVLLDFSKEDDSVDA----EVNEHYKELVKKLDNLE 58
Query: 117 LTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L +L D GA++ I +GAGGT++
Sbjct: 59 LRSMLGSEGDNLGAILKINSGAGGTESN 86
>gi|423484791|ref|ZP_17461480.1| peptide chain release factor 2 [Bacillus cereus BAG6X1-2]
gi|401137377|gb|EJQ44959.1| peptide chain release factor 2 [Bacillus cereus BAG6X1-2]
Length = 326
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITHIPT V
Sbjct: 174 HTSFVSCEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHIPTNTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKL E++ +++ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE+ PFI +YL+
Sbjct: 293 LVKDHRTNTEVGNVQAVMDGEINPFIDAYLR 323
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 58/103 (56%), Gaps = 6/103 (5%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD + ++D+ +++T ++ + D L EE
Sbjct: 4 AGFWDDQQGAQAVINEANALKDMVGRFR----QLDETFENLEMTHDLLKEEYDEDLHEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S +K L + ++++EL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 ESEVKTLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQ 102
>gi|398308472|ref|ZP_10511946.1| peptide chain release factor 2 [Bacillus mojavensis RO-H-1]
Length = 327
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 105/155 (67%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP +E +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT V V
Sbjct: 174 HTSFVSCEVMPEFNDE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQTERSQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+VKD RT E ++ +VMDG+++ FI +YL+ K S
Sbjct: 293 MVKDHRTNTEMGNVQAVMDGDIDVFIDAYLRSKLS 327
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 61/105 (58%), Gaps = 6/105 (5%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLE 99
AD FW+++ +AQ + +KD +N +K K++++ +++T ++ + D L
Sbjct: 2 ADPEFWNDQQKAQTVINEANGLKDYVN---SYK-KLNESHEELQMTHDLLKEEPDHDLQL 57
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E +K L K ++FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 58 ELEKELKALTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|332297634|ref|YP_004439556.1| Peptide chain release factor 2 [Treponema brennaborense DSM 12168]
gi|332180737|gb|AEE16425.1| Peptide chain release factor 2 [Treponema brennaborense DSM 12168]
Length = 378
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 101/154 (65%), Gaps = 1/154 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS V P+L +++++V I EDL + RAGG GGQ+VNK ++AVR TH+PTG+ V
Sbjct: 211 HTSFSSVYVFPVL-DDTIEVDIRPEDLRVDTYRAGGAGGQHVNKTDSAVRFTHLPTGIVV 269
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ N+ A+S L+A+L EQ+ E + + WG QIR+YVF PY
Sbjct: 270 ACQTERSQTMNRATAMSMLRARLYEYYREQKEKENAKFASEKKDISWGNQIRSYVFQPYT 329
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKY 297
+VKD RT HE +I SVMDG ++PFI+++L ++
Sbjct: 330 MVKDHRTKHEIGNIQSVMDGAIDPFIEAFLAAQW 363
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E ++E E + +S FW+N A+A++ + + +K++I D +DDA + +L
Sbjct: 28 IEAAISEKEALSGESGFWENPAKAEKVMTDIKQLKNRIEPWRDLIAAVDDAEALYELG-- 85
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
M+S D L E + + D+ + LLSG D+ GA ++I AGAGGT+A
Sbjct: 86 MESGDESLEAELKAAYDQAQAEYDRLSILNLLSGEVDRNGAFLTIHAGAGGTEA 139
>gi|435854879|ref|YP_007316198.1| peptide chain release factor 2 [Halobacteroides halobius DSM 5150]
gi|433671290|gb|AGB42105.1| peptide chain release factor 2 [Halobacteroides halobius DSM 5150]
Length = 362
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 109/164 (66%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ + TSF+ +VMP L +E ++V I + DL+I RA G GGQ+VN ++
Sbjct: 198 LVRISPFDSSSRRHTSFASVDVMPEL-DEDIEVDIDKSDLKIETYRASGAGGQHVNTTDS 256
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITH+PTG+ +C ERSQ N+ A+ L+AKL +E++A ++ +IRG+ + W
Sbjct: 257 AVRITHLPTGIVAQCQNERSQHKNRQGAMKVLQAKLFEYLQEKQAEKLDEIRGEHKEIAW 316
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIR+YVFHPY+++KD RT ET VMDG+L+ I++YLK
Sbjct: 317 GNQIRSYVFHPYQMIKDHRTDFETGKTEQVMDGDLDQLIEAYLK 360
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 74/130 (56%), Gaps = 4/130 (3%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
++++E+R S +L + +L+ K + FWD+ ++AQ+ + + ++DKI T F +
Sbjct: 13 EQLKELRRSLDYDKLVAKHEKLKEKMSQPDFWDDSSKAQQISKQASALQDKI---TGFDS 69
Query: 76 KMDDAVTIVKLTEE-MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISI 134
+++ + L E + D ++ E ++L KA ++ EL LLSG YD A+++I
Sbjct: 70 LVEEREELEVLLELAIAEDDQAVIAEVKERSQKLVKAREELELKVLLSGEYDSNNALLAI 129
Query: 135 TAGAGGTDAQ 144
GAGGT++Q
Sbjct: 130 NPGAGGTESQ 139
>gi|148267214|ref|YP_001246157.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
JH9]
gi|151220935|ref|YP_001331757.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|221141228|ref|ZP_03565721.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253315812|ref|ZP_04839025.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
str. CF-Marseille]
gi|253732798|ref|ZP_04866963.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
TCH130]
gi|258418241|ref|ZP_05682506.1| peptide chain release factor 2 [Staphylococcus aureus A9763]
gi|258430733|ref|ZP_05688445.1| peptide chain release factor 2 [Staphylococcus aureus A9299]
gi|258440954|ref|ZP_05690789.1| peptide chain release factor 2 [Staphylococcus aureus A8115]
gi|258445784|ref|ZP_05693961.1| peptide chain release factor 2 [Staphylococcus aureus A6300]
gi|258449595|ref|ZP_05697697.1| peptide chain release factor 2 [Staphylococcus aureus A6224]
gi|258452962|ref|ZP_05700956.1| peptide chain release factor 2 [Staphylococcus aureus A5948]
gi|258453995|ref|ZP_05701967.1| peptide chain release factor 2 [Staphylococcus aureus A5937]
gi|269202375|ref|YP_003281644.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ED98]
gi|282895050|ref|ZP_06303271.1| peptide chain release factor 2 [Staphylococcus aureus A8117]
gi|282916096|ref|ZP_06323859.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
D139]
gi|282922051|ref|ZP_06329748.1| peptide chain release factor 2 [Staphylococcus aureus A9765]
gi|282926620|ref|ZP_06334250.1| peptide chain release factor 2 [Staphylococcus aureus A10102]
gi|283769917|ref|ZP_06342809.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
H19]
gi|297208519|ref|ZP_06924948.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300912611|ref|ZP_07130054.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
aureus TCH70]
gi|304381625|ref|ZP_07364275.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|379014042|ref|YP_005290278.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VC40]
gi|384549614|ref|YP_005738866.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
JKD6159]
gi|384861422|ref|YP_005744142.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|386728520|ref|YP_006194903.1| peptide chain release factor 2 (RF-2) [Staphylococcus aureus subsp.
aureus 71193]
gi|404478154|ref|YP_006709584.1| peptide chain release factor 2 [Staphylococcus aureus 08BA02176]
gi|415689250|ref|ZP_11452649.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CGS01]
gi|415693279|ref|ZP_11455112.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CGS03]
gi|416842496|ref|ZP_11905045.1| peptide chain release factor 2 [Staphylococcus aureus O11]
gi|417650425|ref|ZP_12300196.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21189]
gi|417652465|ref|ZP_12302212.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21172]
gi|417655111|ref|ZP_12304825.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21193]
gi|417802439|ref|ZP_12449497.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21318]
gi|417890507|ref|ZP_12534580.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21200]
gi|417892399|ref|ZP_12536449.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21201]
gi|417900179|ref|ZP_12544074.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21259]
gi|418979251|ref|ZP_13527048.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Staphylococcus
aureus subsp. aureus DR10]
gi|422746643|ref|ZP_16800574.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MRSA131]
gi|147740283|gb|ABQ48581.1| bacterial peptide chain release factor 2 (bRF-2) [Staphylococcus
aureus subsp. aureus JH9]
gi|150373735|dbj|BAF66995.1| peptide chain release factor 2, programmed frameshift
[Staphylococcus aureus subsp. aureus str. Newman]
gi|253729163|gb|EES97892.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
TCH130]
gi|257839034|gb|EEV63513.1| peptide chain release factor 2 [Staphylococcus aureus A9763]
gi|257849405|gb|EEV73375.1| peptide chain release factor 2 [Staphylococcus aureus A9299]
gi|257852468|gb|EEV76389.1| peptide chain release factor 2 [Staphylococcus aureus A8115]
gi|257855360|gb|EEV78298.1| peptide chain release factor 2 [Staphylococcus aureus A6300]
gi|257857103|gb|EEV80002.1| peptide chain release factor 2 [Staphylococcus aureus A6224]
gi|257859473|gb|EEV82327.1| peptide chain release factor 2 [Staphylococcus aureus A5948]
gi|257863860|gb|EEV86616.1| peptide chain release factor 2 [Staphylococcus aureus A5937]
gi|262074665|gb|ACY10638.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ED98]
gi|282320044|gb|EFB50391.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
D139]
gi|282591513|gb|EFB96585.1| peptide chain release factor 2 [Staphylococcus aureus A10102]
gi|282593709|gb|EFB98701.1| peptide chain release factor 2 [Staphylococcus aureus A9765]
gi|282762546|gb|EFC02685.1| peptide chain release factor 2 [Staphylococcus aureus A8117]
gi|283460064|gb|EFC07154.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
H19]
gi|296886774|gb|EFH25678.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300886857|gb|EFK82059.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
aureus TCH70]
gi|302332463|gb|ADL22656.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302750651|gb|ADL64828.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304339988|gb|EFM05932.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|315129439|gb|EFT85432.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CGS03]
gi|315196430|gb|EFU26781.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CGS01]
gi|320139911|gb|EFW31772.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MRSA131]
gi|323438713|gb|EGA96454.1| peptide chain release factor 2 [Staphylococcus aureus O11]
gi|329723780|gb|EGG60308.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21189]
gi|329724575|gb|EGG61082.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21172]
gi|329729572|gb|EGG65973.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21193]
gi|334274439|gb|EGL92757.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21318]
gi|341842951|gb|EGS84184.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21259]
gi|341854642|gb|EGS95508.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21200]
gi|341857861|gb|EGS98671.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21201]
gi|374362739|gb|AEZ36844.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VC40]
gi|379992930|gb|EIA14379.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Staphylococcus
aureus subsp. aureus DR10]
gi|384229813|gb|AFH69060.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Staphylococcus
aureus subsp. aureus 71193]
gi|404439643|gb|AFR72836.1| peptide chain release factor 2 [Staphylococcus aureus 08BA02176]
gi|408423142|emb|CCJ10553.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ST228]
gi|408425132|emb|CCJ12519.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ST228]
gi|408427120|emb|CCJ14483.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ST228]
gi|408429107|emb|CCJ26272.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ST228]
gi|408431095|emb|CCJ18410.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ST228]
gi|408433089|emb|CCJ20374.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ST228]
gi|408435080|emb|CCJ22340.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ST228]
gi|408437065|emb|CCJ24308.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ST228]
Length = 331
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 104/151 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH P+G+ V
Sbjct: 175 HTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 235 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYS 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 295 MVKDHRTNEETGKVDAVMDGDIGPFIESYLR 325
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ +FWDN+ +AQ+ + +K +N + ++DD L +E D + E+
Sbjct: 3 AEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQE--EFDEEMKEDL 60
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +D++EL LL GP+D A++ + GAGGT++Q
Sbjct: 61 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQ 103
>gi|58696790|ref|ZP_00372322.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila simulans]
gi|58698424|ref|ZP_00373334.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58698511|ref|ZP_00373415.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225630212|ref|YP_002727003.1| Protein chain release factor B [Wolbachia sp. wRi]
gi|58534979|gb|EAL59074.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58535047|gb|EAL59136.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58537012|gb|EAL60158.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila simulans]
gi|225592193|gb|ACN95212.1| Protein chain release factor B [Wolbachia sp. wRi]
Length = 336
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 101/150 (67%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V P++ E+S+D+ + E+DL+I RA G GGQ+VNK E+AVRITHIPTGV V
Sbjct: 184 HTSFASVGVTPVI-EDSIDIAVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGVVV 242
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C RSQ NK +AL LK +L I E++ ++ + G WG QIR+YV HPY+
Sbjct: 243 QCQNGRSQHRNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGNQIRSYVMHPYQ 302
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD+RTGHE +I SV DG ++ FI S L
Sbjct: 303 MVKDLRTGHEVGNINSVFDGNIDCFIVSVL 332
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Query: 34 LAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDST 93
L EL+ +A++ + W + +AQE L+ + +K+ + ++ +DA++++K +D
Sbjct: 3 LEELDSQASNDNLWQDNQKAQEILKERSKIKNDVESFLKLESDYNDAISLMKSA--IDEN 60
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D E + + +L K + E L +G D + I +GAGGT++
Sbjct: 61 DEEFFSEVENELAKLEKLIKYKETESLFTGEADNNNCFLEIHSGAGGTESN 111
>gi|138896684|ref|YP_001127137.1| peptide chain release factor 2 [Geobacillus thermodenitrificans
NG80-2]
gi|134268197|gb|ABO68392.1| Bacterial peptide chain release factor 2, RF-2 [Geobacillus
thermodenitrificans NG80-2]
Length = 327
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P + +++++++I E+L+I R+ G GGQ+VN ++AVRITH+PTG+ V
Sbjct: 174 HTSFVSCEVVPEM-DDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ KA++ LKAKL E++ +E+ ++RG+ + WG QIR+YVFHPY
Sbjct: 233 TCQSERSQIKNREKAMNMLKAKLYQKKMEEQQAELAELRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RT E ++ +VMDGE++ FI +YL+ K
Sbjct: 293 LVKDHRTNVEVGNVQAVMDGEIDVFIDAYLRAK 325
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDD-AVTIVKLTEEMD-STDAGLLE 99
A FWD++ AQ + +K+ + + D+ VT L EE D A L+E
Sbjct: 2 AAPGFWDDQKAAQAIISEANALKELVGEFESLAERFDNLEVTYELLKEEPDDELQAELVE 61
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EA K+L K QFEL LL+ PYD+ A++ + GAGGT++Q
Sbjct: 62 EA----KKLTKDFSQFELQLLLNEPYDQNNAILELHPGAGGTESQ 102
>gi|408370107|ref|ZP_11167886.1| hypothetical protein I215_04365 [Galbibacter sp. ck-I2-15]
gi|407744582|gb|EKF56150.1| hypothetical protein I215_04365 [Galbibacter sp. ck-I2-15]
Length = 365
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 107/163 (65%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ V PL ++S+++ I ++ F+R+ G GGQNVNKVET
Sbjct: 195 LVRISPFDSNAKRHTSFASVYVYPL-ADDSIEIDINPSEISWDFARSSGAGGQNVNKVET 253
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
+TH PTG+ + +E RSQL N+ KA+ LK++L I ++R + +I +K EW
Sbjct: 254 KAILTHHPTGIIIHNSETRSQLENREKAMQMLKSQLYEIELKKRQAAKDEIEAGKMKIEW 313
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYV HPYKL+KDVR+GHET ++ +VMDG L+ F+K+YL
Sbjct: 314 GSQIRNYVMHPYKLIKDVRSGHETGNVDNVMDGGLDEFLKAYL 356
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
V+ SDR EE+R ++Q E+ E K FWD EA+ ++ D++ + +
Sbjct: 7 VKNLSDRTEELRKYLNIEQKLIEIQNEEEKTFAPDFWDKPKEAEIIMK---DLRTQKKWV 63
Query: 71 TDF---KTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALD---QFELTQLLSGP 124
DF K + D +++ +E D+ + +I + NKA D E +LS
Sbjct: 64 EDFQLAKIMVSDLEVLLEFYKEGDAQE-------EDVINQFNKAKDLIESLEFKNMLSEE 116
Query: 125 YDKEGAVISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPE 167
D AV+ IT+GAGGT++ S M L+ E +I E
Sbjct: 117 GDNMSAVLQITSGAGGTESCDWASMLMRMYLMWGEKHGYKIKE 159
>gi|373855714|ref|ZP_09598460.1| peptide chain release factor 2 [Bacillus sp. 1NLA3E]
gi|372454783|gb|EHP28248.1| peptide chain release factor 2 [Bacillus sp. 1NLA3E]
Length = 327
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 105/153 (68%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP +E ++V I EDL+I RA G GGQ++N ++AVRITH PTGV V
Sbjct: 174 HTSFVSCEVMPEFNDE-IEVDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHAPTGVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LKAKL + E++ +++ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQNERSQIKNREQAMKMLKAKLYQLKIEEQEAQLLEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT E+ ++ +VMDG++ FI +YL+ K
Sbjct: 293 MVKDHRTSTESGNVQAVMDGDINMFIDAYLRSK 325
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 45 SFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASI 104
+FWD++ +AQ + +KD++++ D ++ +L +E DA L + S
Sbjct: 5 NFWDDQQQAQTVISESNALKDQVHVFHDLYETYENLELTFELIKE--EPDAELQSDLESE 62
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ E L +FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 63 LLEFTDRLSKFELELLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|417796172|ref|ZP_12443388.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21305]
gi|334270036|gb|EGL88444.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21305]
Length = 331
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 104/151 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH P+G+ V
Sbjct: 175 HTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 235 NNQNERSQIKNREAAMKMLKSKLYHLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYS 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 295 MVKDHRTNEETGKVDAVMDGDIGPFIESYLR 325
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ +FWDN+ +AQ+ + +K +N + ++DD L +E D + E+
Sbjct: 3 AEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQE--EFDEEMKEDL 60
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +D++EL LL GP+D A++ + GAGGT++Q
Sbjct: 61 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQ 103
>gi|311070034|ref|YP_003974957.1| peptide chain release factor 2 [Bacillus atrophaeus 1942]
gi|419821592|ref|ZP_14345185.1| peptide chain release factor 2 [Bacillus atrophaeus C89]
gi|310870551|gb|ADP34026.1| peptide chain release factor 2 [Bacillus atrophaeus 1942]
gi|388474228|gb|EIM10958.1| peptide chain release factor 2 [Bacillus atrophaeus C89]
Length = 327
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 105/155 (67%), Gaps = 1/155 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP EE +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT V V
Sbjct: 174 HTSFVSCDVMPEFNEE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LK+KL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQTERSQIKNRDRAMKMLKSKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
LVKD RT E ++ +VMDG+++ FI +YL+ K S
Sbjct: 293 LVKDHRTNTEMGNVQAVMDGDIDVFIDAYLRSKLS 327
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 6/105 (5%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLE 99
AD FW+++ +AQ + +KD +N +K K+ ++ +++T ++ + D L
Sbjct: 2 ADPEFWNDQQKAQTVINEANGLKDYVN---SYK-KLSESHEELQMTHDLLKEEPDEELQL 57
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E +K L K ++FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 58 ELVKELKTLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|417798692|ref|ZP_12445852.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21310]
gi|421149526|ref|ZP_15609184.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
str. Newbould 305]
gi|334275553|gb|EGL93842.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21310]
gi|394330443|gb|EJE56535.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
str. Newbould 305]
Length = 331
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 104/151 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH P+G+ V
Sbjct: 175 HTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 235 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYS 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 295 MVKDHRTNEETGKVDAVMDGDIGPFIESYLR 325
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA-VTIVKLTEEMDSTDAGLLEE 100
A+ +FWDN+ +AQ+ + +K +N + ++DD T L EE D LE+
Sbjct: 3 AEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLEQ 62
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
K +D++EL LL GP+D A++ + GAGGT++Q
Sbjct: 63 EVIYFK---AKVDEYELQLLLDGPHDANNAILELHPGAGGTESQ 103
>gi|416849065|ref|ZP_11908008.1| peptide chain release factor 2 [Staphylococcus aureus O46]
gi|323441389|gb|EGA99047.1| peptide chain release factor 2 [Staphylococcus aureus O46]
Length = 331
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 104/151 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH P+G+ V
Sbjct: 175 HTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 235 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYS 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 295 MVKDHRTNEETGKVDAVMDGDIGPFIESYLR 325
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ +FWDN+ +AQ+ + +K +N + ++DD L +E D + E+
Sbjct: 3 AEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQE--EFDEEMKEDL 60
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +D++EL LL GP+D A++ + GAGGT++Q
Sbjct: 61 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQ 103
>gi|418644339|ref|ZP_13206485.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-55]
gi|375025884|gb|EHS19277.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-55]
Length = 330
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 104/151 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH P+G+ V
Sbjct: 174 HTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVV 233
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 234 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYS 293
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 294 MVKDHRTNEETGKVDAVMDGDIGPFIESYLR 324
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA-VTIVKLTEEMDSTDAGLLEE 100
A+ +FWDN+ +AQ+ + +K +N + ++DD T L EE D LE+
Sbjct: 2 AEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLEQ 61
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
K +D++EL LL GP+D A++ + GAGG ++Q
Sbjct: 62 EVIYFK---AKVDEYELQLLLDGPHDANNAILELHPGAGGAESQ 102
>gi|308233692|ref|ZP_07664429.1| peptide chain release factor 2 [Atopobium vaginae DSM 15829]
gi|328943371|ref|ZP_08240836.1| peptide chain release factor RF2 [Atopobium vaginae DSM 15829]
gi|327491340|gb|EGF23114.1| peptide chain release factor RF2 [Atopobium vaginae DSM 15829]
Length = 375
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 151/281 (53%), Gaps = 28/281 (9%)
Query: 42 ADSSFWDNRA--EAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT------EEMDST 93
AD+S D+ EA+ LT+V D + L T F + D IV +T E D
Sbjct: 90 ADTSSQDDEMLIEAKRLANKLTNVLDNLELNTWFNDEFDTGAAIVTITPGQGGLEAQDWC 149
Query: 94 DAGL-----LEEAASIIKELNKA-------LDQFELTQLLSGPYD----KEGA--VISIT 135
D E S ++N A +D+ T Y ++G ++ I+
Sbjct: 150 DMLFKMYLHYCERKSWTVDINDAPVGEVIGIDRATFTVTGKNAYGMLRAEQGVHRLVRIS 209
Query: 136 AGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRIT 195
QT+F+G EV+P+LP+ +++VQI +D+ I A G GGQ VN ++AVRIT
Sbjct: 210 PTDAKKRRQTTFAGVEVLPVLPQ-TIEVQIDTQDIRIDVYHASGPGGQGVNTTDSAVRIT 268
Query: 196 HIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIR 255
HIPTG+ V C ERSQL NK A+ L++KL + +++R E+ +RG WG QIR
Sbjct: 269 HIPTGIVVTCQNERSQLQNKAAAMQILRSKLYELEKQRREEELDDLRGPKHDISWGNQIR 328
Query: 256 NYVFHPYKLVKDVRTGHETSDIVSVM-DGELEPFIKSYLKY 295
NY+ +P++LVKD RT ET ++ +V+ +G+L+ FI +Y ++
Sbjct: 329 NYILYPFQLVKDTRTQVETGNVDAVLQEGDLDQFIIAYHRW 369
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 15/135 (11%)
Query: 17 RVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKIN-------L 69
R E++ + +L + +L ++A +++FW++ A A E + L +K+K+N L
Sbjct: 20 RCEQVGMYLHINELRSHVDKLTVQAGETTFWNDAAHATEVMAQLGALKEKLNQYDSAYKL 79
Query: 70 LTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEG 129
L D + + A T S D +L EA + +L LD EL + +D
Sbjct: 80 LLDVQAAFELADT--------SSQDDEMLIEAKRLANKLTNVLDNLELNTWFNDEFDTGA 131
Query: 130 AVISITAGAGGTDAQ 144
A+++IT G GG +AQ
Sbjct: 132 AIVTITPGQGGLEAQ 146
>gi|120436153|ref|YP_861839.1| peptide chain release factor 2 [Gramella forsetii KT0803]
gi|117578303|emb|CAL66772.1| peptide chain release factor 2 [Gramella forsetii KT0803]
Length = 333
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 107/163 (65%), Gaps = 1/163 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ A + PL+ ++S+++ I DL R+ G GGQNVNKVET
Sbjct: 163 LVRISPFDSNAKRHTSFASAYIYPLV-DDSIEIDINPSDLSWETMRSSGAGGQNVNKVET 221
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVR+ H PTG+ + +E RSQL NK KA+ LK++L I +++ + ++I +K EW
Sbjct: 222 AVRLRHEPTGIVIENSETRSQLENKNKAMQLLKSQLFEIELQKKQEQRREIEDSKMKIEW 281
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
G QIRNYV HPYKLVKDVRT ET ++ VM+G ++ F+KS+L
Sbjct: 282 GSQIRNYVMHPYKLVKDVRTAEETGNVDDVMNGNIDAFLKSFL 324
>gi|401565607|ref|ZP_10806437.1| peptide chain release factor 2 [Selenomonas sp. FOBRC6]
gi|400186702|gb|EJO20909.1| peptide chain release factor 2 [Selenomonas sp. FOBRC6]
Length = 368
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS +VMP + +++++V I +D+ + + RA G GGQ++NK +AVR+TH PTG+ V
Sbjct: 212 HTSFSACDVMPEI-DDAVEVPINMDDVRVDYFRASGAGGQHINKTSSAVRMTHEPTGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL NK + L L+AKL + +E++ EI ++ G K EWG QIR+YVF PY
Sbjct: 271 QCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEEIAKLEGVQQKIEWGSQIRSYVFQPYT 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKDVRT ET ++ +VMDGE++PFI++YL K
Sbjct: 331 MVKDVRTNVETGNVQAVMDGEIDPFIRAYLNAK 363
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 78/131 (59%), Gaps = 4/131 (3%)
Query: 15 SDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFK 74
++++++R S + E+++AELE K ++ SFWD+ A AQ+ Q L +K ++ K
Sbjct: 13 GEKLDQMRISLEIPAKEEKIAELEYKMSEPSFWDDAAAAQKLNQELAALKGGVDTYEGLK 72
Query: 75 TKMDDAVTIVKL-TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVIS 133
K +DA T+ ++ EE D T G + ++I E L+ +L LLSG YD A+++
Sbjct: 73 AKYEDAETLYEMGIEENDPTMEGDIRAELTLIAE---GLETLQLEVLLSGDYDANDAILT 129
Query: 134 ITAGAGGTDAQ 144
+ AGAGGT+AQ
Sbjct: 130 LHAGAGGTEAQ 140
>gi|258421538|ref|ZP_05684463.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
aureus A9719]
gi|258423403|ref|ZP_05686294.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
aureus A9635]
gi|257842464|gb|EEV66888.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
aureus A9719]
gi|257846464|gb|EEV70487.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
aureus A9635]
Length = 352
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 104/151 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH P+G+ V
Sbjct: 196 HTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVV 255
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 256 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYS 315
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 316 MVKDHRTNEETGKVDAVMDGDIGPFIESYLR 346
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L+ E + E E A+ +FWDN+ +AQ+ + +K +N + ++DD L
Sbjct: 9 LENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDL 68
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+E D + E+ + +D++EL LL GP+D A++ + GAGGT++Q
Sbjct: 69 LQE--EFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQ 124
>gi|418581468|ref|ZP_13145549.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1605]
gi|418891396|ref|ZP_13445513.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1176]
gi|418897171|ref|ZP_13451244.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|418900141|ref|ZP_13454200.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1214]
gi|418908547|ref|ZP_13462555.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG149]
gi|418916619|ref|ZP_13470580.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1267]
gi|418922423|ref|ZP_13476340.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1233]
gi|418981657|ref|ZP_13529372.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1242]
gi|418985295|ref|ZP_13532984.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1500]
gi|377705223|gb|EHT29531.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1214]
gi|377707137|gb|EHT31431.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1500]
gi|377707477|gb|EHT31770.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1242]
gi|377711695|gb|EHT35924.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1605]
gi|377732353|gb|EHT56404.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1176]
gi|377735746|gb|EHT59776.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1233]
gi|377751124|gb|EHT75058.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1267]
gi|377755886|gb|EHT79784.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG149]
gi|377761950|gb|EHT85819.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC341D]
Length = 330
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 104/151 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH P+G+ V
Sbjct: 174 HTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVV 233
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 234 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYS 293
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 294 MVKDHRTNEETGKVDAVMDGDIGPFIESYLR 324
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ +FWDN+ +AQ+ + +K +N + ++DD L +E D + E+
Sbjct: 2 AEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQE--EFDGEMKEDL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +D++EL LL GP+D A++ + GAGGT++Q
Sbjct: 60 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQ 102
>gi|417902351|ref|ZP_12546218.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21266]
gi|341843441|gb|EGS84668.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21266]
Length = 331
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 104/151 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH P+G+ V
Sbjct: 175 HTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 235 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYS 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 295 MVKDHRTNEETGKVDAVMDGDIGPFIESYLR 325
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ +FWDN+ +AQ+ + +K +N + ++DD L +E D + E+
Sbjct: 3 AEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQE--EFDEEMKEDL 60
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +D++EL LL GP+D A++ + GAGGT++Q
Sbjct: 61 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQ 103
>gi|417896571|ref|ZP_12540517.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21235]
gi|341840537|gb|EGS82040.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21235]
Length = 331
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 104/151 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH P+G+ V
Sbjct: 175 HTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 235 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYS 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 295 MVKDHRTNEETGKVDAVMDGDIGPFIESYLR 325
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ +FWDN+ +AQ+ + +K +N + ++DD L +E D + E+
Sbjct: 3 AEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQVEVDDMDATWDLLQE--EFDEEMKEDL 60
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +D++EL LL GP+D A++ + GAGGT++Q
Sbjct: 61 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQ 103
>gi|15923744|ref|NP_371278.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926431|ref|NP_373964.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
N315]
gi|82750458|ref|YP_416199.1| peptide chain release factor 2 [Staphylococcus aureus RF122]
gi|156979082|ref|YP_001441341.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
Mu3]
gi|253731382|ref|ZP_04865547.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|255005545|ref|ZP_05144146.2| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257794925|ref|ZP_05643904.1| peptide chain release factor 2 [Staphylococcus aureus A9781]
gi|262052329|ref|ZP_06024532.1| peptide chain release factor 2 [Staphylococcus aureus 930918-3]
gi|296275163|ref|ZP_06857670.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MR1]
gi|379020525|ref|YP_005297187.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
M013]
gi|384547036|ref|YP_005736289.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ED133]
gi|384864079|ref|YP_005749438.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|384869340|ref|YP_005752054.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
T0131]
gi|385781080|ref|YP_005757251.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
11819-97]
gi|387149917|ref|YP_005741481.1| Peptide chain release factor 2 [Staphylococcus aureus 04-02981]
gi|387602109|ref|YP_005733630.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ST398]
gi|418280783|ref|ZP_12893608.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21178]
gi|418285829|ref|ZP_12898496.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21209]
gi|418308216|ref|ZP_12919859.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21194]
gi|418309566|ref|ZP_12921120.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21331]
gi|418313637|ref|ZP_12925122.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21334]
gi|418315392|ref|ZP_12926856.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21340]
gi|418318355|ref|ZP_12929760.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21232]
gi|418322194|ref|ZP_12933531.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VCU006]
gi|418423897|ref|ZP_12997039.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VRS1]
gi|418426874|ref|ZP_12999895.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VRS2]
gi|418429804|ref|ZP_13002730.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|418432700|ref|ZP_13005493.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VRS4]
gi|418436415|ref|ZP_13008225.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS5]
gi|418439312|ref|ZP_13011028.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS6]
gi|418442290|ref|ZP_13013902.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VRS7]
gi|418445418|ref|ZP_13016904.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS8]
gi|418448357|ref|ZP_13019757.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS9]
gi|418451178|ref|ZP_13022517.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS10]
gi|418454200|ref|ZP_13025468.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS11a]
gi|418457104|ref|ZP_13028314.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS11b]
gi|418560578|ref|ZP_13125091.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21252]
gi|418569746|ref|ZP_13134060.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21283]
gi|418574180|ref|ZP_13138357.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21333]
gi|418578653|ref|ZP_13142748.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1114]
gi|418600554|ref|ZP_13164010.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21343]
gi|418639427|ref|ZP_13201674.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-3]
gi|418640930|ref|ZP_13203146.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-24]
gi|418647137|ref|ZP_13209216.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-88]
gi|418651038|ref|ZP_13213049.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-91]
gi|418654275|ref|ZP_13216188.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-99]
gi|418659140|ref|ZP_13220830.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-111]
gi|418660976|ref|ZP_13222582.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-122]
gi|418872469|ref|ZP_13426808.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-125]
gi|418874775|ref|ZP_13429041.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC93]
gi|418877599|ref|ZP_13431838.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1165]
gi|418880458|ref|ZP_13434678.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1213]
gi|418883384|ref|ZP_13437583.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1769]
gi|418886046|ref|ZP_13440196.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1150]
gi|418888652|ref|ZP_13442788.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1524]
gi|418894210|ref|ZP_13448311.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1057]
gi|418903029|ref|ZP_13457070.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1770]
gi|418904873|ref|ZP_13458902.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|418911431|ref|ZP_13465414.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG547]
gi|418913943|ref|ZP_13467915.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418919626|ref|ZP_13473569.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC348]
gi|418924992|ref|ZP_13478895.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG2018]
gi|418928077|ref|ZP_13481963.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1612]
gi|418930787|ref|ZP_13484635.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1750]
gi|418933689|ref|ZP_13487513.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC128]
gi|418948884|ref|ZP_13501164.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-157]
gi|418952399|ref|ZP_13504429.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-160]
gi|418952673|ref|ZP_13504689.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-189]
gi|418987657|ref|ZP_13535330.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1835]
gi|418990644|ref|ZP_13538305.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1096]
gi|418993467|ref|ZP_13541104.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG290]
gi|419775539|ref|ZP_14301478.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CO-23]
gi|419784550|ref|ZP_14310314.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-M]
gi|422744898|ref|ZP_16798853.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MRSA177]
gi|424775720|ref|ZP_18202711.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CM05]
gi|424784611|ref|ZP_18211421.1| Peptide chain release factor 2 [Staphylococcus aureus CN79]
gi|440706819|ref|ZP_20887541.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21282]
gi|440734234|ref|ZP_20913846.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
DSM 20231]
gi|443637554|ref|ZP_21121630.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21236]
gi|448741992|ref|ZP_21723948.1| peptide chain release factor 2 [Staphylococcus aureus KT/314250]
gi|448744324|ref|ZP_21726218.1| peptide chain release factor 2 [Staphylococcus aureus KT/Y21]
gi|13700645|dbj|BAB41942.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
N315]
gi|14246523|dbj|BAB56916.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
Mu50]
gi|82655989|emb|CAI80394.1| peptide chain release factor 2 [Staphylococcus aureus RF122]
gi|156721217|dbj|BAF77634.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
Mu3]
gi|253724907|gb|EES93636.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|257788897|gb|EEV27237.1| peptide chain release factor 2 [Staphylococcus aureus A9781]
gi|259159769|gb|EEW44810.1| peptide chain release factor 2 [Staphylococcus aureus 930918-3]
gi|283470047|emb|CAQ49258.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ST398]
gi|285816456|gb|ADC36943.1| Peptide chain release factor 2 [Staphylococcus aureus 04-02981]
gi|298694086|gb|ADI97308.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ED133]
gi|312829246|emb|CBX34088.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|320141998|gb|EFW33826.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MRSA177]
gi|329313475|gb|AEB87888.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
T0131]
gi|359829834|gb|AEV77812.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
M013]
gi|364522069|gb|AEW64819.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
11819-97]
gi|365167354|gb|EHM58819.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21178]
gi|365169390|gb|EHM60643.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21209]
gi|365223803|gb|EHM65078.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VCU006]
gi|365235336|gb|EHM76255.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21334]
gi|365238899|gb|EHM79727.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21331]
gi|365240804|gb|EHM81567.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21194]
gi|365243224|gb|EHM83910.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21232]
gi|365244022|gb|EHM84690.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21340]
gi|371971642|gb|EHO89039.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21252]
gi|371980277|gb|EHO97491.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21333]
gi|371985352|gb|EHP02425.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21283]
gi|374393361|gb|EHQ64674.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21343]
gi|375016561|gb|EHS10200.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-99]
gi|375017453|gb|EHS11067.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-3]
gi|375020127|gb|EHS13668.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-24]
gi|375026850|gb|EHS20228.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-91]
gi|375030960|gb|EHS24255.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-88]
gi|375036385|gb|EHS29458.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-111]
gi|375039751|gb|EHS32669.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-122]
gi|375367219|gb|EHS71187.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-125]
gi|375368874|gb|EHS72772.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-160]
gi|375370391|gb|EHS74200.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-157]
gi|375376387|gb|EHS79922.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-189]
gi|377696307|gb|EHT20663.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1165]
gi|377696680|gb|EHT21035.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1114]
gi|377698558|gb|EHT22906.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1057]
gi|377716050|gb|EHT40235.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1769]
gi|377716654|gb|EHT40836.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1750]
gi|377719445|gb|EHT43615.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1835]
gi|377722766|gb|EHT46891.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1096]
gi|377724809|gb|EHT48924.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG547]
gi|377727344|gb|EHT51451.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1150]
gi|377732896|gb|EHT56946.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1213]
gi|377737989|gb|EHT61998.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1612]
gi|377742044|gb|EHT66029.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1770]
gi|377746287|gb|EHT70258.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG2018]
gi|377746626|gb|EHT70596.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG290]
gi|377754162|gb|EHT78071.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1524]
gi|377757445|gb|EHT81333.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377766413|gb|EHT90246.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|377767151|gb|EHT90964.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC348]
gi|377771469|gb|EHT95223.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC128]
gi|377772115|gb|EHT95868.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC93]
gi|383363994|gb|EID41319.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-M]
gi|383970762|gb|EID86855.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CO-23]
gi|387720235|gb|EIK08148.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|387720486|gb|EIK08396.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VRS2]
gi|387722260|gb|EIK10085.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VRS1]
gi|387726884|gb|EIK14424.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VRS4]
gi|387729085|gb|EIK16551.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS5]
gi|387731393|gb|EIK18701.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS6]
gi|387737592|gb|EIK24657.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS8]
gi|387738825|gb|EIK25842.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS9]
gi|387739267|gb|EIK26275.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VRS7]
gi|387746342|gb|EIK33074.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS10]
gi|387747174|gb|EIK33884.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS11a]
gi|387748704|gb|EIK35373.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS11b]
gi|402346795|gb|EJU81871.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CM05]
gi|421957210|gb|EKU09534.1| Peptide chain release factor 2 [Staphylococcus aureus CN79]
gi|436431262|gb|ELP28615.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
DSM 20231]
gi|436506693|gb|ELP42464.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21282]
gi|443405545|gb|ELS64147.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21236]
gi|445547384|gb|ELY15654.1| peptide chain release factor 2 [Staphylococcus aureus KT/314250]
gi|445562327|gb|ELY18503.1| peptide chain release factor 2 [Staphylococcus aureus KT/Y21]
Length = 330
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 104/151 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH P+G+ V
Sbjct: 174 HTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVV 233
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 234 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYS 293
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 294 MVKDHRTNEETGKVDAVMDGDIGPFIESYLR 324
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ +FWDN+ +AQ+ + +K +N + ++DD L +E D + E+
Sbjct: 2 AEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQE--EFDEEMKEDL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +D++EL LL GP+D A++ + GAGGT++Q
Sbjct: 60 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQ 102
>gi|282908140|ref|ZP_06315971.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282910399|ref|ZP_06318203.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282325791|gb|EFB56099.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282327805|gb|EFB58087.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
aureus subsp. aureus WW2703/97]
Length = 352
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 104/151 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH P+G+ V
Sbjct: 196 HTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVV 255
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 256 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYS 315
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 316 MVKDHRTNEETGKVDAVMDGDIGPFIESYLR 346
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L+ E + E E A+ +FWDN+ +AQ+ + +K +N + ++DD L
Sbjct: 9 LENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDL 68
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+E D + E+ + +D++EL LL GP+D A++ + GAGGT++Q
Sbjct: 69 LQE--EFDGEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQ 124
>gi|262049538|ref|ZP_06022408.1| peptide chain release factor 2 [Staphylococcus aureus D30]
gi|259162374|gb|EEW46946.1| peptide chain release factor 2 [Staphylococcus aureus D30]
Length = 330
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 104/151 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH P+G+ V
Sbjct: 174 HTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVV 233
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 234 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYS 293
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 294 MVKDHRTNEETGKVDAVMDGDIGPFIESYLR 324
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA-VTIVKLTEEMDSTDAGLLEE 100
A+ +FWDN+ +AQ+ + +K +N + ++DD T L EE D LE+
Sbjct: 2 AEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEYLEQ 61
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +D++EL LL GP+D A++ + GAGGT++Q
Sbjct: 62 E---VINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQ 102
>gi|418656280|ref|ZP_13218094.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-105]
gi|443640229|ref|ZP_21124220.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21196]
gi|375034002|gb|EHS27180.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-105]
gi|443405370|gb|ELS63973.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21196]
Length = 330
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 104/151 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH P+G+ V
Sbjct: 174 HTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVV 233
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 234 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYS 293
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 294 MVKDHRTNEETGKVDAVMDGDIGPFIESYLR 324
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA-VTIVKLTEEMDSTDAGLLEE 100
A+ +FWDN+ +AQ+ + +K +N + ++DD T L EE D LE+
Sbjct: 2 AEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLEQ 61
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
K +D++EL LL GP+D A++ + GAGGT++Q
Sbjct: 62 EVIYFK---AKVDEYELQLLLDGPHDANNAILELHPGAGGTESQ 102
>gi|415683581|ref|ZP_11448797.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CGS00]
gi|418565434|ref|ZP_13129838.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21264]
gi|418595814|ref|ZP_13159409.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21342]
gi|418601772|ref|ZP_13165188.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21345]
gi|315194373|gb|EFU24765.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CGS00]
gi|371973363|gb|EHO90713.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21264]
gi|374397583|gb|EHQ68792.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21345]
gi|374400422|gb|EHQ71536.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21342]
Length = 330
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 104/151 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH P+G+ V
Sbjct: 174 HTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVV 233
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 234 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYS 293
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 294 MVKDHRTNEETGKVDAVMDGDIGPFIESYLR 324
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ +FWDN+ +AQ+ + +K +N + ++DD L +E D + E+
Sbjct: 2 AEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQE--EFDGEMKEDL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +D++EL LL GP+D A++ + GAGGT++Q
Sbjct: 60 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQ 102
>gi|257438202|ref|ZP_05613957.1| peptide chain release factor 2 [Faecalibacterium prausnitzii
A2-165]
gi|257199279|gb|EEU97563.1| peptide chain release factor 2 [Faecalibacterium prausnitzii
A2-165]
Length = 373
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EVMP L + ++ V I ED+E+ R+ G GGQ++NK +AVR+ H PTGV V
Sbjct: 214 QTSFASLEVMPEL-DNTIQVDIRPEDIEMQVFRSSGAGGQHINKTSSAVRLIHKPTGVVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C +RSQ N+ A+ LKAKL IA++Q +I I+G + WG QIR+YVF PY
Sbjct: 273 SCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQNEIAWGHQIRSYVFMPYT 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT +ET ++ +VMDG+L+ FI +YLK
Sbjct: 333 MVKDHRTNYETGNVDAVMDGDLDGFIFAYLK 363
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
V+++ + + K + ELE + F+D+ +++ + D+K K+N +
Sbjct: 18 VKDLEEALAIDASRKRVQELEHTMSRPGFYDDAELSKKVFDEVGDLKGKLNRFEKLQGLY 77
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
DDA T++ + +E D ++ EA + + KA+D+ +L +L+G YD A+++ AG
Sbjct: 78 DDAETMLVMLDE--EYDPDMVPEAEEAVNAVGKAVDELQLMTMLNGEYDHSNAILTFHAG 135
Query: 138 AGGTDAQ 144
GGT+AQ
Sbjct: 136 TGGTEAQ 142
>gi|257424874|ref|ZP_05601301.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427542|ref|ZP_05603941.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
65-1322]
gi|257430173|ref|ZP_05606557.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
68-397]
gi|257432874|ref|ZP_05609234.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
E1410]
gi|257435778|ref|ZP_05611826.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
M876]
gi|282913594|ref|ZP_06321383.1| peptide chain release factor 2, programmed [Staphylococcus aureus
subsp. aureus M899]
gi|282918547|ref|ZP_06326284.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
C427]
gi|282923513|ref|ZP_06331193.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
C101]
gi|283957586|ref|ZP_06375039.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293500640|ref|ZP_06666491.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
58-424]
gi|293509587|ref|ZP_06668298.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
M809]
gi|293524173|ref|ZP_06670860.1| peptide chain release factor 2, programmed [Staphylococcus aureus
subsp. aureus M1015]
gi|297590314|ref|ZP_06948953.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
aureus MN8]
gi|384868314|ref|YP_005748510.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
aureus TCH60]
gi|417887266|ref|ZP_12531399.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21195]
gi|257272444|gb|EEV04567.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275735|gb|EEV07208.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
65-1322]
gi|257279370|gb|EEV09971.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
68-397]
gi|257282289|gb|EEV12424.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
E1410]
gi|257284969|gb|EEV15088.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
M876]
gi|282314381|gb|EFB44771.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
C101]
gi|282317681|gb|EFB48053.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
C427]
gi|282322626|gb|EFB52948.1| peptide chain release factor 2, programmed [Staphylococcus aureus
subsp. aureus M899]
gi|283791037|gb|EFC29852.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290921136|gb|EFD98197.1| peptide chain release factor 2, programmed [Staphylococcus aureus
subsp. aureus M1015]
gi|291095645|gb|EFE25906.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
58-424]
gi|291467684|gb|EFF10199.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
M809]
gi|297576613|gb|EFH95328.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
aureus MN8]
gi|312438819|gb|ADQ77890.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
aureus TCH60]
gi|341858319|gb|EGS99116.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21195]
Length = 331
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 104/151 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH P+G+ V
Sbjct: 175 HTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 235 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYS 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 295 MVKDHRTNEETGKVDAVMDGDIGPFIESYLR 325
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ +FWDN+ +AQ+ + +K +N + ++DD L +E D + E+
Sbjct: 3 AEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQE--EFDGEMKEDL 60
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +D++EL LL GP+D A++ + GAGGT++Q
Sbjct: 61 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQ 103
>gi|222150753|ref|YP_002559906.1| peptide chain release factor RF-2 [Macrococcus caseolyticus
JCSC5402]
gi|222119875|dbj|BAH17210.1| peptide chain release factor RF-2 [Macrococcus caseolyticus
JCSC5402]
Length = 350
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 102/151 (67%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV P ++++++I ED++I RA G GGQ+VN ++AVRITH PTG+ V
Sbjct: 197 HTSFVSCEVTPEFDNDNIEIEINSEDIKIDTYRASGAGGQHVNTTDSAVRITHQPTGIVV 256
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LKAKL E++ +E+ IRG+ + WG QIR+YVFHPY
Sbjct: 257 TCQNERSQIKNREQAMKMLKAKLYQKKIEEQEAELAAIRGEQKEIGWGSQIRSYVFHPYS 316
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET + +VMDG+++ FI +YLK
Sbjct: 317 MVKDHRTNVETGNTNAVMDGDIDLFIDAYLK 347
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L++ E + E E AD FW++ +AQ+ + +K + + + ++++ + ++
Sbjct: 10 LEEKETNIKEYEEMMADPDFWNDGDKAQDIINKNNALKSVVQEFSTLEEGLENSEVLFEM 69
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+E +D +E + L + + FEL LLSG +D A++ + GAGGT++Q
Sbjct: 70 YKE--ESDEDTHQELIEQLNTLQQIANDFELKMLLSGEFDANNAILELHPGAGGTESQ 125
>gi|196249386|ref|ZP_03148084.1| peptide chain release factor 2 [Geobacillus sp. G11MC16]
gi|196211143|gb|EDY05904.1| peptide chain release factor 2 [Geobacillus sp. G11MC16]
Length = 327
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P + +++++++I E+L+I R+ G GGQ+VN ++AVRITH+PTG+ V
Sbjct: 174 HTSFVSCEVVPEM-DDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ KA++ LKAKL E++ +E+ ++RG+ + WG QIR+YVFHPY
Sbjct: 233 TCQSERSQIKNREKAINMLKAKLYQKKMEEQQAELAELRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
LVKD RT E ++ +VMDGE++ FI +YL+ K
Sbjct: 293 LVKDHRTNVEVGNVQAVMDGEIDVFIDAYLRAK 325
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDD-AVTIVKLTEEMD-STDAGLLE 99
A FWD++ AQ + +K+ + + D+ VT L EE D A L+E
Sbjct: 2 AAPGFWDDQKAAQAIISEANALKELVGEFESLAERFDNLEVTYELLKEEPDDELQAELVE 61
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EA K+L K QFEL LL+ PYD+ A++ + GAGGT++Q
Sbjct: 62 EA----KKLTKDFSQFELQLLLNEPYDQNNAILELHPGAGGTESQ 102
>gi|42784339|ref|NP_981586.1| peptide chain release factor 2 [Bacillus cereus ATCC 10987]
gi|42740270|gb|AAS44194.1| peptide chain release factor 2, programmed frameshift [Bacillus
cereus ATCC 10987]
Length = 380
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH PT V
Sbjct: 228 HTSFVSCEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVV 286
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 287 TCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 346
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE++PFI +YL+
Sbjct: 347 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLR 377
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 82/140 (58%), Gaps = 6/140 (4%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+++E + R+ R S L EK++AELE K + FWD++ AQ + +KD
Sbjct: 21 IRQELEKMAKRLAAFRGSLDLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKD- 79
Query: 67 INLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ F+ ++D+ +++T E+ + D L EE S +K L + ++++EL LLS P
Sbjct: 80 --MVGKFR-QLDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDP 136
Query: 125 YDKEGAVISITAGAGGTDAQ 144
YDK A++ + GAGGT++Q
Sbjct: 137 YDKNNAILELHPGAGGTESQ 156
>gi|421858651|ref|ZP_16290915.1| protein chain release factor B [Paenibacillus popilliae ATCC 14706]
gi|410831824|dbj|GAC41352.1| protein chain release factor B [Paenibacillus popilliae ATCC 14706]
Length = 340
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 108/151 (71%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +V+P + ++ +D+++ EDL+I RA G GGQ++N ++AVRITHIPTG+ V
Sbjct: 182 HTSFVSCDVVPEITDD-VDIEVRNEDLKIDTYRASGAGGQHINTTDSAVRITHIPTGIVV 240
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A++ L++KL E++ ++ +IRGD + WG QIR+YVFHPY
Sbjct: 241 TCQTERSQIKNRERAMTLLRSKLYERKIEEQQKQLAEIRGDQMDIAWGSQIRSYVFHPYS 300
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDG+++ FI++YL+
Sbjct: 301 MVKDHRTQVETGNVGAVMDGDIDEFIEAYLR 331
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 34 LAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDST 93
+A E K + FWD+ AQ + L +K + + + +D +++L +E
Sbjct: 2 IANYEEKMSAPDFWDDNERAQGMISELNAIKGIVEEYSSLQQDYEDTQMMLELADE--EH 59
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D GL +E +K+L ++QFEL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 DEGLAQELGEGVKQLYGRVEQFELQLLLSEPYDKMNAILELHPGAGGTESQ 110
>gi|399928309|ref|ZP_10785667.1| peptide chain release factor 2 [Myroides injenensis M09-0166]
Length = 254
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 105/150 (70%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF V PL +++++++I D+ R+ G GGQNVNKVETAVR+ H PTG+ +
Sbjct: 97 HTSFVSVYVYPL-ADDTIEIEISPADISWETMRSSGAGGQNVNKVETAVRLRHHPTGIII 155
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+E RSQL NK KA+ LK++L I +++ + +I + K EWG QIRNYV HPYK
Sbjct: 156 ENSETRSQLDNKTKAMQLLKSQLYEIELKKKQAMRDEIEANKKKIEWGSQIRNYVMHPYK 215
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRT +E++D+ +VM+GE++PF+K+YL
Sbjct: 216 LVKDVRTQYESTDVDAVMNGEIDPFLKAYL 245
>gi|418283228|ref|ZP_12895982.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21202]
gi|365168015|gb|EHM59374.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21202]
Length = 330
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 104/151 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH P+G+ V
Sbjct: 174 HTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVV 233
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 234 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYS 293
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 294 MVKDHRTNEETGKVDAVMDGDIGPFIESYLR 324
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ +FWDN+ +AQ+ + +K +N + ++DD L +E D + E+
Sbjct: 2 AEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQE--EFDEEMKEDL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +D++EL LL GP+D A++ + GAGGT++Q
Sbjct: 60 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQ 102
>gi|289435770|ref|YP_003465642.1| peptide chain release factor RF-2 [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|289172014|emb|CBH28560.1| peptide chain release factor RF-2 [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 327
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++ +++++ EDL+I RA G GGQ++N ++AVR+THIP+G+ V
Sbjct: 174 HTSFVSVDVMPEL-DDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQL N+ +A+ LK KL +E++ E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQSERSQLKNRDQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 293 MVKDHRTNYETGNIQAVMDGDLDDFINAYLR 323
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
D +FW+++ AQ+ + K+ + + + ++L +E D L EE
Sbjct: 3 DPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE--EADEDLQEELE 60
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
I ++ FEL +LS PYDK A++ + GAGGT++Q
Sbjct: 61 KDITAYMATINAFELKLMLSDPYDKNNAILELHPGAGGTESQ 102
>gi|449108914|ref|ZP_21745555.1| peptide chain release factor 2 [Treponema denticola ATCC 33520]
gi|448961189|gb|EMB41897.1| peptide chain release factor 2 [Treponema denticola ATCC 33520]
Length = 320
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 108/164 (65%), Gaps = 2/164 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ P+L +++++V I EDL I RAGG GGQ+VNK ++AVRITHIPTG+ V
Sbjct: 157 HTSFTSVFAFPVL-DDTIEVDIRPEDLRIDTYRAGGAGGQHVNKTDSAVRITHIPTGIVV 215
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C +RSQ++N+ A++ LK++L EEQ+ E + + WG QIR+YVF PY
Sbjct: 216 ACQTQRSQISNRATAMNVLKSRLYNYYEEQKEKENMKFAAEKKGISWGNQIRSYVFQPYT 275
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKY-SMSLSASDA 306
+VKD RT +ET +I +VMDGE++ FI S+L K MS+ D+
Sbjct: 276 MVKDHRTKYETGNIQAVMDGEIDEFINSFLNTKIEDMSIDEDDS 319
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+K++I + ++ D +++L+EE S + L EE S + + + + LLS
Sbjct: 7 LKNRIYPWQELMDEVSDLEVLMELSEE--SGNEELSEEIDSNYNSVYEKYKKLSILSLLS 64
Query: 123 GPYDKEGAVISITAGAGGTDA 143
G DK A +++ AGAGGT+A
Sbjct: 65 GEVDKNDAYLTVHAGAGGTEA 85
>gi|282905164|ref|ZP_06313021.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282331571|gb|EFB61083.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
Btn1260]
Length = 331
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 104/151 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH P+G+ V
Sbjct: 175 HTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 235 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYS 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 295 MVKDHRTNEETGKVDAVMDGDIGPFIESYLR 325
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 18/111 (16%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ +FWDN+ +AQ+ + +K +N + ++DD MD+T L EE
Sbjct: 3 AEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDD----------MDATWDLLQEEF 52
Query: 102 ASIIKE--------LNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+KE +D++EL LL GP+D A++ + GAGGT++Q
Sbjct: 53 EGEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQ 103
>gi|229164123|ref|ZP_04292059.1| Peptide chain release factor 2 [Bacillus cereus R309803]
gi|228619359|gb|EEK76249.1| Peptide chain release factor 2 [Bacillus cereus R309803]
Length = 326
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P +E ++++I EDL+I RA G GGQ++N ++AVRITH PT V
Sbjct: 174 HTSFVSCEVVPEFNDE-VEIEIRSEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE++PFI +YL+
Sbjct: 293 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLR 323
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +K+ ++ F+ K+D+ +++T E+ + D L EE
Sbjct: 4 AGFWDDQQGAQVVINEANALKE---MVGKFR-KLDETFENLEITHELLKEEYDEDLHEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +K L + ++++EL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 EAEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQ 102
>gi|227817946|ref|YP_002817955.1| peptide chain release factor 2 [Bacillus anthracis str. CDC 684]
gi|229604792|ref|YP_002869406.1| peptide chain release factor 2 [Bacillus anthracis str. A0248]
gi|386739041|ref|YP_006212222.1| Peptide chain release factor 2 [Bacillus anthracis str. H9401]
gi|227003828|gb|ACP13571.1| peptide chain release factor 2, programmed frameshift [Bacillus
anthracis str. CDC 684]
gi|229269200|gb|ACQ50837.1| peptide chain release factor 2, programmed [Bacillus anthracis str.
A0248]
gi|384388893|gb|AFH86554.1| Peptide chain release factor 2 [Bacillus anthracis str. H9401]
Length = 380
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH PT V
Sbjct: 228 HTSFVSCEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVV 286
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 287 TCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 346
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE++PFI +YL+
Sbjct: 347 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLR 377
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 82/140 (58%), Gaps = 6/140 (4%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+++E + R+ R S L EK++AELE K + FWD++ AQ + +KD
Sbjct: 21 IRQELEKMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKD- 79
Query: 67 INLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ F+ ++D+ +++T E+ + D L EE S +K L + ++++EL LLS P
Sbjct: 80 --MVGKFR-QLDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDP 136
Query: 125 YDKEGAVISITAGAGGTDAQ 144
YDK A++ + GAGGT++Q
Sbjct: 137 YDKNKAILELHPGAGGTESQ 156
>gi|379012633|ref|YP_005270445.1| peptide chain release factor 2 [Acetobacterium woodii DSM 1030]
gi|375303422|gb|AFA49556.1| peptide chain release factor 2 [Acetobacterium woodii DSM 1030]
Length = 337
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 104/150 (69%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP + +ES++++I ED+ I R+ G GGQ+VN ++A+RITH+ TG+ V
Sbjct: 185 HTSFASLDVMPEV-DESVEIEILPEDIRIDTFRSSGAGGQHVNTTDSAIRITHLKTGIVV 243
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK A+ LK KL+ I E+++ I+ I+GD + WG QIR+YVFHPY
Sbjct: 244 QCQNERSQHQNKEVAMGMLKGKLVEIMEQEKMDHIEDIKGDYSQIAWGSQIRSYVFHPYT 303
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
+VKD RT E ++ SVMDG+L+ F+ +YL
Sbjct: 304 MVKDHRTNVEVGNVASVMDGDLDGFMNAYL 333
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 70/118 (59%), Gaps = 5/118 (4%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
+ +L KE+ ELE K D FW+++ AQ L+ L K K++ + +DD + +++L
Sbjct: 1 MARLVKEIDELEKKTEDPEFWNDQKSAQIVLKELKITKIKVDHYNELAEALDDIMVMLEL 60
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EE + ++E ++ IKEL+ LD F + LLSG YD A+IS+ GAGGT++Q
Sbjct: 61 AEEGE-----IVEGFSAAIKELDVNLDNFRIETLLSGEYDSNNAIISLHPGAGGTESQ 113
>gi|339480212|ref|ZP_08655871.1| peptide chain release factor 2 [Leuconostoc pseudomesenteroides
KCTC 3652]
Length = 372
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 111/156 (71%), Gaps = 1/156 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++S++V++ ++D+++ R+GG GGQNVNKV T VR+TH PTG+ V
Sbjct: 214 HTSFVSVDVMPEL-DDSIEVEVRDDDVKMDVFRSGGAGGQNVNKVSTGVRLTHEPTGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T ER+Q N+ A+ LK+KL + E++ +E + G+ ++ WG QIR+YV HPY+
Sbjct: 273 SSTVERTQYGNRDYAMRLLKSKLYQLELEKKEAERAALTGEKMENGWGSQIRSYVLHPYQ 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSM 299
+VKD RT +ET+ +V+DG+L+PFI +YL+++ S+
Sbjct: 333 MVKDHRTNYETNQPQAVLDGDLDPFINAYLQWQLSL 368
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 71/128 (55%), Gaps = 1/128 (0%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
+ + R S L+ L +E+A+ E + + FWD+ +AQ+ ++ +K++ + + +
Sbjct: 15 ENITRFRNSLDLEALTEEIADYENRMTEPGFWDDNDKAQKVIEENNVLKNRRDSFLNLTS 74
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
+++D + ++ E D D L E + I++ + +D + L QLL+ PYD AV+ I
Sbjct: 75 QVEDLEVLTEMLAE-DPEDTDLENELSEGIEKAQQDIDAYNLEQLLTEPYDANNAVLEIH 133
Query: 136 AGAGGTDA 143
G+GGT++
Sbjct: 134 PGSGGTES 141
>gi|218906362|ref|YP_002454196.1| peptide chain release factor 2 [Bacillus cereus AH820]
gi|218540032|gb|ACK92430.1| peptide chain release factor 2, programmed frameshift [Bacillus
cereus AH820]
Length = 380
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH PT V
Sbjct: 228 HTSFVSCEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVV 286
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 287 TCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 346
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE++PFI +YL+
Sbjct: 347 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLR 377
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 82/140 (58%), Gaps = 6/140 (4%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+++E + R+ R S L EK++AELE K + FWD++ AQ + +KD
Sbjct: 21 IRQELEKMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKD- 79
Query: 67 INLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ F+ ++D+ +++T E+ + D L EE S +K L + ++++EL LLS P
Sbjct: 80 --MVGKFR-QLDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDP 136
Query: 125 YDKEGAVISITAGAGGTDAQ 144
YDK A++ + GAGGT++Q
Sbjct: 137 YDKNNAILELHPGAGGTESQ 156
>gi|418561330|ref|ZP_13125822.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21262]
gi|371977675|gb|EHO94938.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21262]
Length = 330
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 104/151 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH P+G+ V
Sbjct: 174 HTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVV 233
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 234 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYS 293
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 294 MVKDHRTNEETGKVDAVMDGDIGPFIESYLR 324
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ +FW+N+ +AQE + +K +N + ++DD L +E D + E+
Sbjct: 2 AEPNFWENQTKAQEIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQE--EFDEEMKEDL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +D++EL LL GP+D A++ + GAGGT++Q
Sbjct: 60 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQ 102
>gi|116873873|ref|YP_850654.1| peptide chain release factor 2 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742751|emb|CAK21875.1| peptide chain release factor 2 [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 327
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++ +++++ EDL+I RA G GGQ++N ++AVR+THIP+G+ V
Sbjct: 174 HTSFVSVDVMPEL-DDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQL N+ +A+ LK KL +E++ E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQSERSQLKNRDQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 293 MVKDHRTNYETGNIQAVMDGDLDDFINAYLR 323
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
D +FW+++ AQ+ + K+ + + + ++L +E D L E
Sbjct: 3 DPNFWNDQQAAQKIINESNGYKETYQAFHALEEEQESMEISLELLKE--EADEDLQAELE 60
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
I +++FEL +LS PYDK A++ + GAGGT++Q
Sbjct: 61 KDITAYMATINEFELKLMLSDPYDKNNAILELHPGAGGTESQ 102
>gi|449124064|ref|ZP_21760383.1| peptide chain release factor 2 [Treponema denticola OTK]
gi|448942395|gb|EMB23289.1| peptide chain release factor 2 [Treponema denticola OTK]
Length = 320
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 108/164 (65%), Gaps = 2/164 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ P+L +++++V I EDL I RAGG GGQ+VNK ++AVRITHIPTG+ V
Sbjct: 157 HTSFTSVFAFPVL-DDTIEVDIRPEDLRIDTYRAGGAGGQHVNKTDSAVRITHIPTGIVV 215
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C +RSQ++N+ A++ LK++L EEQ+ E + + WG QIR+YVF PY
Sbjct: 216 ACQTQRSQISNRATAMNVLKSRLYNYYEEQKEKENMKFAAEKKGISWGNQIRSYVFQPYT 275
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKY-SMSLSASDA 306
+VKD RT +ET +I +VMDGE++ FI S+L K MS+ D+
Sbjct: 276 MVKDHRTKYETGNIQAVMDGEIDEFINSFLNTKIEDMSIDEDDS 319
>gi|163754877|ref|ZP_02161998.1| peptide chain release factor RF-2 [Kordia algicida OT-1]
gi|161324944|gb|EDP96272.1| peptide chain release factor RF-2 [Kordia algicida OT-1]
Length = 316
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 105/150 (70%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL+ ++++++ I D+EI+ +R+ G GGQNVNKVET V++TH P+G+ +
Sbjct: 156 HTSFASVYVYPLV-DDTIEIDINPADIEITTARSSGAGGQNVNKVETKVQLTHKPSGIQI 214
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C+E RSQ N+ +A+ LK++L I +++ I +K EWG QIRNYV HPYK
Sbjct: 215 SCSETRSQHDNRTRAMQMLKSQLYEIELKKQMEARDDIEAGKMKIEWGSQIRNYVMHPYK 274
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRT HET ++ +VM+G ++ F+K+YL
Sbjct: 275 LVKDVRTAHETGNVDAVMNGYIDEFLKAYL 304
>gi|374601529|ref|ZP_09674529.1| peptide chain release factor 2 [Paenibacillus dendritiformis C454]
gi|374392864|gb|EHQ64186.1| peptide chain release factor 2 [Paenibacillus dendritiformis C454]
Length = 340
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 108/151 (71%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +V+P + ++ +D+++ EDL+I RA G GGQ++N ++AVRITHIPTG+ V
Sbjct: 182 HTSFVSCDVVPEITDD-VDIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHIPTGIVV 240
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A++ L++KL E++ ++ +IRGD + WG QIR+YVFHPY
Sbjct: 241 TCQTERSQIKNRERAMTLLRSKLYERKIEEQQKQLAEIRGDQMDIAWGSQIRSYVFHPYS 300
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDG+++ FI++YL+
Sbjct: 301 MVKDHRTQVETGNVGAVMDGDIDEFIEAYLR 331
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 34 LAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDST 93
++ E K + FWD+ AQ + L +K + + + +D +++L +E
Sbjct: 2 ISNYEEKMSAPDFWDDNERAQGIISELNAIKGIVEEYSKLQQDHEDTQMMLELADE--EN 59
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D GL +E A +K+L + ++QFEL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 DEGLAQELADSVKQLYERVEQFELQLLLSEPYDKMNAILELHPGAGGTESQ 110
>gi|365840058|ref|ZP_09381272.1| peptide chain release factor 2 [Anaeroglobus geminatus F0357]
gi|364562797|gb|EHM40629.1| peptide chain release factor 2 [Anaeroglobus geminatus F0357]
Length = 342
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 106/152 (69%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP LP++ ++V+I +D+ + + RA G GGQ+VNK +AVR+THIPTG+ V
Sbjct: 180 HTSFTAVDVMPELPDD-VEVEINMDDVRVDYFRASGAGGQHVNKTSSAVRMTHIPTGIVV 238
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ+ N+ + L+AKL + EE++ ++ G EWG QIR+YVFHPY
Sbjct: 239 QCQNERSQVQNREMCMKYLRAKLFELEEEKKERLRAELTGTQQAIEWGSQIRSYVFHPYT 298
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
LVKD RTG ET +I +V DG+++ FI+ YL++
Sbjct: 299 LVKDHRTGVETGNIQAVADGDIDMFIEGYLQF 330
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTE-EMDSTD 94
+L+M+ +D FW++ +A+ Q T +K+++ D ++A + +L E ++ D
Sbjct: 2 DLDMQMSDPDFWNDPDKAKIVSQEATKLKEEVQGHDDLA---EEAAELHELCEMALEDGD 58
Query: 95 AGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E L + L++ E+ LLSG YD A+++ AGAGGT+AQ
Sbjct: 59 PSFTAEIERQYNHLLRELERREVLLLLSGEYDSCNAIMTFHAGAGGTEAQ 108
>gi|260063027|ref|YP_003196107.1| peptide chain release factor 2 [Robiginitalea biformata HTCC2501]
gi|88784596|gb|EAR15766.1| peptide chain release factor 2 [Robiginitalea biformata HTCC2501]
Length = 313
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 103/150 (68%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL ++S++++I D+EI+ +R+ G GGQNVNKVET V++ H PTG+ +
Sbjct: 156 HTSFASVYVYPL-ADDSIEIEINPADIEITTARSSGAGGQNVNKVETKVQLVHKPTGIQI 214
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C++ RSQ N+ AL LK++L I ++ + I +K EWG QIRNYV HPYK
Sbjct: 215 SCSDSRSQHDNRATALKMLKSQLYEIELRKKQEAREAIESSKMKIEWGSQIRNYVMHPYK 274
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRTG ET ++ +VMDGE+ F+K++L
Sbjct: 275 LVKDVRTGEETGNVDAVMDGEINDFLKAFL 304
>gi|291547275|emb|CBL20383.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus sp.
SR1/5]
Length = 332
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 104/152 (68%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF +VMP + ++ +DV+I ++D+ I R+ G GGQ++NK +A+RITH PTG+ V
Sbjct: 174 QTSFVSCDVMPDIKKD-LDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK KA+ LKAKL ++ +++ ++ IRG+ WG QIR+YV PY
Sbjct: 233 QCQNERSQHMNKDKAMQMLKAKLYLLKQQEAEEKLSGIRGEVTDIGWGNQIRSYVLQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
+VKD RT ET ++ +V+DG ++ FI +YLK+
Sbjct: 293 MVKDHRTNEETGNVDAVLDGGIDIFINAYLKW 324
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 4/105 (3%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M+A D FWDN +Q ++ L +KD I + +T+M+D T++++ E D ++
Sbjct: 1 MEAPD--FWDNAEASQMKMKQLKSLKDDIETYHNLETQMEDMETMIEMGYE--ENDPEIV 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
E ++ E + D + LLSG YD E A+I + AGAGGT+A
Sbjct: 57 PEIQEMLDEFQASFDSIRVKTLLSGEYDGENAIIKLNAGAGGTEA 101
>gi|238019424|ref|ZP_04599850.1| hypothetical protein VEIDISOL_01293 [Veillonella dispar ATCC 17748]
gi|237864123|gb|EEP65413.1| hypothetical protein VEIDISOL_01293 [Veillonella dispar ATCC 17748]
Length = 330
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 112/158 (70%), Gaps = 1/158 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP + ++++++ I +D+++ RA G GGQ++NK ++AVR+TH PTG+ V
Sbjct: 174 HTSFAAVDVMPEI-DDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHRPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C +RSQ+ N+ +AL L+AKL + E++A +QI G EWG QIR+YVFHPY
Sbjct: 233 QCQTQRSQMQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYN 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSL 301
LVKD RTG ET ++ SVMDG L+ F++ +LK + ++++
Sbjct: 293 LVKDHRTGVETGNVQSVMDGNLDQFMEGFLKKEANLTI 330
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+D +FWD+ +A+E Q T +K+ + + ++DA ++++ E D D L E
Sbjct: 2 SDPTFWDDPDKAREISQEATQLKNAVESYKQLVSDIEDANVMLEMAIEED--DRSLEGEI 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
++++ + +++ E+ LLSG YD A+++ AGAGGT+AQ
Sbjct: 60 KDYVQQIEETVEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQ 102
>gi|46908681|ref|YP_015070.1| peptide chain release factor 2 [Listeria monocytogenes serotype 4b
str. F2365]
gi|67461157|sp|Q71WR9.1|RF2_LISMF RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|46881953|gb|AAT05247.1| peptide chain release factor 2, programmed frameshift [Listeria
monocytogenes serotype 4b str. F2365]
Length = 366
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++ +++++ EDL+I RA G GGQ++N ++AVR+THIP+G+ V
Sbjct: 213 HTSFVSVDVMPEL-DDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQL N+ +A+ LK KL +E++ E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 272 TCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYS 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 332 MVKDHRTNYETGNIQAVMDGDLDEFINAYLR 362
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 2/138 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R ++E + ++++ R S L +E +AELE + D +FW+++ AQ+ + K+
Sbjct: 6 IRNELEKTAQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKET 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + + ++L +E D L EE IK + +FEL +LS PYD
Sbjct: 66 YQAFHALEEEQESMEISLELLKE--EADEDLQEELEKDIKAYMATISEFELKLMLSDPYD 123
Query: 127 KEGAVISITAGAGGTDAQ 144
K A++ + GAGGT++Q
Sbjct: 124 KNNAILELHPGAGGTESQ 141
>gi|311031920|ref|ZP_07710010.1| peptide chain release factor 2 [Bacillus sp. m3-13]
Length = 326
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 105/153 (68%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP ++++++ I EDL+I RA G GGQ++N ++AVRITH+PT V V
Sbjct: 174 HTSFVSCEVMPEF-DDNIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ L+AKL +++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQTERSQIKNRERAMKMLQAKLYQKKLDEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT E + +VMDG+L+PFI +YL+ K
Sbjct: 293 MVKDHRTNTEVGNTQAVMDGDLDPFIDAYLRSK 325
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
++ FW+N++ AQ + +K+ + + ++ +L +E DA L E
Sbjct: 2 SNPEFWNNQSSAQVVINEANALKEPVGQFHELSENYENLQLTYELVKE--EPDAELQAEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S +K + + ++FEL LLSG +DK A++ + GAGGT++Q
Sbjct: 60 GSEVKTVAEDFNKFELQLLLSGEHDKNNAILELHPGAGGTESQ 102
>gi|381180503|ref|ZP_09889342.1| bacterial peptide chain release factor 2 (bRF-2) [Treponema
saccharophilum DSM 2985]
gi|380767491|gb|EIC01491.1| bacterial peptide chain release factor 2 (bRF-2) [Treponema
saccharophilum DSM 2985]
Length = 380
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 102/154 (66%), Gaps = 1/154 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS + P+L +++++V I EDL + R+GGKGGQ+VNK ++AVR TH+PTG+ V
Sbjct: 213 HTSFSSVFIFPIL-DDTIEVNIRPEDLRVDTYRSGGKGGQHVNKTDSAVRFTHLPTGIVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ+ N+ ++ L+AKL EEQR E + + WG QIR+YVF PY
Sbjct: 272 QCDSERSQIMNRQTCMNLLRAKLYAYYEEQRQKETAKFGAEKKDISWGNQIRSYVFQPYT 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKY 297
+VKD RT DI +VMDG+++ FI S+L+ ++
Sbjct: 332 MVKDNRTKFSVGDIQAVMDGDIDQFIDSFLQAQW 365
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+LRKD++ ++++ + +E+++ E E K FW++ +AQ+ + L +K
Sbjct: 11 SLRKDIQGVWEKLDP-------ESIERKIKETEAKTLAEGFWNDTEKAQKVMNDLKLLKG 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
+I D ++ DD T+ +L E D L E + ++ K ++ + LLSG
Sbjct: 64 RIEPWRDLISQADDISTLYELAIEDGDDDGSLEAEVRTNLEAAQKRFEELSILNLLSGEA 123
Query: 126 DKEGAVISITAGAGGTDA 143
DK G ++I AGAGGT+A
Sbjct: 124 DKNGCFLTIHAGAGGTEA 141
>gi|49478907|ref|YP_039176.1| peptide chain release factor 2 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52140380|ref|YP_086452.1| peptide chain release factor 2 [Bacillus cereus E33L]
gi|118480225|ref|YP_897376.1| peptide chain release factor 2 [Bacillus thuringiensis str. Al
Hakam]
gi|228923910|ref|ZP_04087187.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228930187|ref|ZP_04093196.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228948905|ref|ZP_04111178.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228955423|ref|ZP_04117428.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228961413|ref|ZP_04123027.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229050846|ref|ZP_04194398.1| Peptide chain release factor 2 [Bacillus cereus AH676]
gi|229072632|ref|ZP_04205834.1| Peptide chain release factor 2 [Bacillus cereus F65185]
gi|229082391|ref|ZP_04214854.1| Peptide chain release factor 2 [Bacillus cereus Rock4-2]
gi|229094280|ref|ZP_04225356.1| Peptide chain release factor 2 [Bacillus cereus Rock3-42]
gi|229112593|ref|ZP_04242130.1| Peptide chain release factor 2 [Bacillus cereus Rock1-15]
gi|229124692|ref|ZP_04253873.1| Peptide chain release factor 2 [Bacillus cereus 95/8201]
gi|229130431|ref|ZP_04259388.1| Peptide chain release factor 2 [Bacillus cereus BDRD-Cer4]
gi|229147710|ref|ZP_04276053.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST24]
gi|229153340|ref|ZP_04281518.1| Peptide chain release factor 2 [Bacillus cereus m1550]
gi|229181440|ref|ZP_04308768.1| Peptide chain release factor 2 [Bacillus cereus 172560W]
gi|229187396|ref|ZP_04314539.1| Peptide chain release factor 2 [Bacillus cereus BGSC 6E1]
gi|229193426|ref|ZP_04320374.1| Peptide chain release factor 2 [Bacillus cereus ATCC 10876]
gi|229199302|ref|ZP_04325969.1| Peptide chain release factor 2 [Bacillus cereus m1293]
gi|296505600|ref|YP_003667300.1| peptide chain release factor 2 [Bacillus thuringiensis BMB171]
gi|301056649|ref|YP_003794860.1| peptide chain release factor 2 [Bacillus cereus biovar anthracis
str. CI]
gi|423411078|ref|ZP_17388198.1| peptide chain release factor 2 [Bacillus cereus BAG3O-2]
gi|423427270|ref|ZP_17404301.1| peptide chain release factor 2 [Bacillus cereus BAG3X2-2]
gi|423433137|ref|ZP_17410141.1| peptide chain release factor 2 [Bacillus cereus BAG4O-1]
gi|423438579|ref|ZP_17415560.1| peptide chain release factor 2 [Bacillus cereus BAG4X12-1]
gi|423506938|ref|ZP_17483527.1| peptide chain release factor 2 [Bacillus cereus HD73]
gi|449092236|ref|YP_007424677.1| PrfB [Bacillus thuringiensis serovar kurstaki str. HD73]
gi|49330463|gb|AAT61109.1| peptide chain release factor [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51973849|gb|AAU15399.1| peptide chain release factor 2 (RF-2) [Bacillus cereus E33L]
gi|118419450|gb|ABK87869.1| bacterial peptide chain release factor 2 (bRF-2) [Bacillus
thuringiensis str. Al Hakam]
gi|228584162|gb|EEK42313.1| Peptide chain release factor 2 [Bacillus cereus m1293]
gi|228590081|gb|EEK47952.1| Peptide chain release factor 2 [Bacillus cereus ATCC 10876]
gi|228596100|gb|EEK53777.1| Peptide chain release factor 2 [Bacillus cereus BGSC 6E1]
gi|228602015|gb|EEK59508.1| Peptide chain release factor 2 [Bacillus cereus 172560W]
gi|228629944|gb|EEK86595.1| Peptide chain release factor 2 [Bacillus cereus m1550]
gi|228635723|gb|EEK92210.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST24]
gi|228653026|gb|EEL08907.1| Peptide chain release factor 2 [Bacillus cereus BDRD-Cer4]
gi|228658787|gb|EEL14446.1| Peptide chain release factor 2 [Bacillus cereus 95/8201]
gi|228670973|gb|EEL26280.1| Peptide chain release factor 2 [Bacillus cereus Rock1-15]
gi|228689133|gb|EEL42956.1| Peptide chain release factor 2 [Bacillus cereus Rock3-42]
gi|228700823|gb|EEL53346.1| Peptide chain release factor 2 [Bacillus cereus Rock4-2]
gi|228710608|gb|EEL62581.1| Peptide chain release factor 2 [Bacillus cereus F65185]
gi|228722502|gb|EEL73895.1| Peptide chain release factor 2 [Bacillus cereus AH676]
gi|228798298|gb|EEM45297.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228804215|gb|EEM50829.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228810661|gb|EEM57009.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228829472|gb|EEM75100.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228835709|gb|EEM81073.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|296326652|gb|ADH09580.1| peptide chain release factor 2 [Bacillus thuringiensis BMB171]
gi|300378818|gb|ADK07722.1| peptide chain release factor 2 [Bacillus cereus biovar anthracis
str. CI]
gi|401108094|gb|EJQ16026.1| peptide chain release factor 2 [Bacillus cereus BAG3O-2]
gi|401109455|gb|EJQ17379.1| peptide chain release factor 2 [Bacillus cereus BAG3X2-2]
gi|401113049|gb|EJQ20921.1| peptide chain release factor 2 [Bacillus cereus BAG4O-1]
gi|401116194|gb|EJQ24036.1| peptide chain release factor 2 [Bacillus cereus BAG4X12-1]
gi|402445749|gb|EJV77617.1| peptide chain release factor 2 [Bacillus cereus HD73]
gi|449025993|gb|AGE81156.1| PrfB [Bacillus thuringiensis serovar kurstaki str. HD73]
Length = 326
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH PT V
Sbjct: 174 HTSFVSCEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE++PFI +YL+
Sbjct: 293 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLR 323
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 4 AGFWDDQQGAQAVINEANALKD---MVGKFR-QLDETFENLEITHELLKEEYDEDLHEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S +K L + ++++EL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 ESEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQ 102
>gi|406905686|gb|EKD47084.1| hypothetical protein ACD_66C00234G0002 [uncultured bacterium]
Length = 369
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 101/158 (63%), Gaps = 1/158 (0%)
Query: 144 QTSFSGAEVMPLLPEESM-DVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVT 202
TSF+ EV+P L S +QI E+D+ + AGG GGQ VN +AVRITHIPT
Sbjct: 211 HTSFALVEVIPELTGFSQASIQIDEKDIRVDTFMAGGHGGQGVNTTYSAVRITHIPTNTV 270
Query: 203 VRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPY 262
V C ERSQL NK A+ LK++L V +E+RA ++ Q++G WG QIR+YV HPY
Sbjct: 271 VTCQNERSQLQNKESAMRVLKSRLFVRMQEERAEKLDQLKGGHKSPAWGNQIRSYVLHPY 330
Query: 263 KLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 300
K+VKD RT E D V+DG+L+PFI +YL+ + S S
Sbjct: 331 KMVKDHRTDCEIQDAEKVLDGDLQPFIDAYLRKEVSES 368
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
++ + ELE++ + + FW+++ +A++ Q ++ K +I + ++ DA+ + KL +
Sbjct: 28 QERVHELEVQMSGADFWNDQEQAKQVSQEASERKAQIEVWQTLLIEIQDALDLSKLAQ-- 85
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
D +A + E +L ++ EL LLSG D+ A++SI AGAGG+DA
Sbjct: 86 DEQNAKVESEIEKTFNDLQSRYEKLELQILLSGEMDENNAILSIHAGAGGSDA 138
>gi|423100842|ref|ZP_17088548.1| peptide chain release factor 2 [Listeria innocua ATCC 33091]
gi|370792648|gb|EHN60504.1| peptide chain release factor 2 [Listeria innocua ATCC 33091]
Length = 338
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++ +++++ EDL+I RA G GGQ++N ++AVR+THIP+G+ V
Sbjct: 185 HTSFVSVDVMPEL-DDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVV 243
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQL N+ +A+ LK KL +E++ E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 244 TCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYS 303
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 304 MVKDHRTNYETGNIQAVMDGDLDDFINAYLR 334
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E +AELE + D +FW+++ AQ+ + K+ + + + ++L +E
Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D L E IK + +FEL +LS PYDK A++ + GAGGT++Q
Sbjct: 61 --EADEDLQAELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQ 113
>gi|312898633|ref|ZP_07758023.1| peptide chain release factor 2 [Megasphaera micronuciformis F0359]
gi|310620552|gb|EFQ04122.1| peptide chain release factor 2 [Megasphaera micronuciformis F0359]
Length = 338
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 107/152 (70%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP LP+++ +V+I +D+ + + RA G GGQ+VNK +AVR+THIPTG+ V
Sbjct: 176 HTSFTAVDVMPELPDDA-EVEINMDDVRVDYFRASGAGGQHVNKTSSAVRMTHIPTGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ+ N+ + L+AKL + EE++ ++ G EWG QIR+YVFHPY
Sbjct: 235 QCQNERSQIQNREMCMKYLRAKLFELEEEKKEKLRAELTGTQQSIEWGSQIRSYVFHPYN 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
LVKD RTG ETS+I SVMDG ++ FI+ YL++
Sbjct: 295 LVKDHRTGVETSNIQSVMDGNIDMFIEGYLQF 326
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT-EEMDSTDAGL 97
M+ +D FW++ A+ Q T +K+++ D + D + L E+ D++ G
Sbjct: 1 MRMSDPDFWNSPDTAKAVSQEATKLKEEVQGHDDLVNEAADLSELYDLAAEDEDTSFTGE 60
Query: 98 LE-EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+E + ++KEL K E+ LLSG YD A+++ AGAGGT+AQ
Sbjct: 61 IERQYYRLVKELEKR----EVLLLLSGEYDSCNAIMAFHAGAGGTEAQ 104
>gi|284802947|ref|YP_003414812.1| peptide chain release factor 2 [Listeria monocytogenes 08-5578]
gi|284996088|ref|YP_003417856.1| peptide chain release factor 2 [Listeria monocytogenes 08-5923]
gi|386054698|ref|YP_005972256.1| peptide chain release factor 2 [Listeria monocytogenes Finland
1998]
gi|284058509|gb|ADB69450.1| peptide chain release factor 2 [Listeria monocytogenes 08-5578]
gi|284061555|gb|ADB72494.1| peptide chain release factor 2 [Listeria monocytogenes 08-5923]
gi|346647349|gb|AEO39974.1| peptide chain release factor 2 [Listeria monocytogenes Finland
1998]
Length = 338
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++ +++++ EDL+I RA G GGQ++N ++AVR+THIP+G+ V
Sbjct: 185 HTSFVSVDVMPEL-DDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVV 243
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQL N+ +A+ LK KL +E++ E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 244 TCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYS 303
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 304 MVKDHRTNYETGNIQAVMDGDLDDFINAYLR 334
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E +AELE + D +FW+++ AQ+ + K+ + + + ++L +E
Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D L EE IK + FEL +LS PYDK A++ + GAGGT++Q
Sbjct: 61 --EADEDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILELHPGAGGTESQ 113
>gi|449105225|ref|ZP_21741930.1| peptide chain release factor 2 [Treponema denticola ASLM]
gi|451969531|ref|ZP_21922760.1| peptide chain release factor 2 [Treponema denticola US-Trep]
gi|448967212|gb|EMB47853.1| peptide chain release factor 2 [Treponema denticola ASLM]
gi|451701628|gb|EMD56089.1| peptide chain release factor 2 [Treponema denticola US-Trep]
Length = 320
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 108/164 (65%), Gaps = 2/164 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ P+L +++++V I EDL I RAGG GGQ+VNK ++AVRITHIPTG+ V
Sbjct: 157 HTSFTSVFAFPVL-DDTIEVDIRPEDLRIDTYRAGGAGGQHVNKTDSAVRITHIPTGIVV 215
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C +RSQ++N+ A++ LK++L EEQ+ E + + WG QIR+YVF PY
Sbjct: 216 ACQTQRSQISNRATAMNVLKSRLYNYYEEQKEKENMKFAAEKKGISWGNQIRSYVFQPYT 275
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKY-SMSLSASDA 306
+VKD RT +ET +I +VMDGE++ FI S+L K MS+ D+
Sbjct: 276 MVKDHRTKYETGNIQAVMDGEIDEFINSFLNTKIEDMSIDEDDS 319
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+K++I + ++ D +++L+EE S + L EE S + + + + LLS
Sbjct: 7 LKNRIYPWQELMDEVSDLEVLMELSEE--SGNEELSEEIGSNYNSVYEKYKKLSILSLLS 64
Query: 123 GPYDKEGAVISITAGAGGTDA 143
G DK A +++ AGAGGT+A
Sbjct: 65 GEVDKNDAYLTVHAGAGGTEA 85
>gi|49188023|ref|YP_031276.1| peptide chain release factor 2 [Bacillus anthracis str. Sterne]
gi|49181950|gb|AAT57326.1| peptide chain release factor 2 [Bacillus anthracis str. Sterne]
Length = 326
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH PT V
Sbjct: 174 HTSFVSCEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE++PFI +YL+
Sbjct: 293 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLR 323
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 4 AGFWDDQQGAQAVINEANALKD---MVGKFR-QLDETFENLEITHELLKEEYDEDLHEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S +K L + ++++EL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 ESEVKGLIQEMNEYELQLLLSDPYDKNKAILELHPGAGGTESQ 102
>gi|295100603|emb|CBK98148.1| bacterial peptide chain release factor 2 (bRF-2) [Faecalibacterium
prausnitzii L2-6]
Length = 373
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EVMP L + ++ V I ED+E+ R+ G GGQ++NK +AVR+ H PTG+ V
Sbjct: 214 QTSFASLEVMPEL-DNTIQVDIRPEDIEMQVYRSSGAGGQHINKTSSAVRLIHKPTGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C +RSQ N+ A+ LKAKL IA++Q +I I+G + WG QIR+YVF PY
Sbjct: 273 SCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQNEIAWGHQIRSYVFMPYT 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT +ET ++ +VMDG+L+ FI +YLK
Sbjct: 333 MVKDHRTNYETGNVDAVMDGDLDGFIFAYLK 363
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
V+++ + + K + ELE + F+D+ +++ + D+K K+N +
Sbjct: 18 VKDLEEALAIDASRKRVQELEHTMSRPGFYDDAELSKKVFDEVGDLKGKLNRFEKLQGLY 77
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
DDA T++ + +E D ++ EA + + KA+D+ +L +L+G YD A+++ AG
Sbjct: 78 DDAETMLVMLDE--EYDPEMVPEAEEAVNAVGKAVDELQLMTMLNGEYDHSNAILTFHAG 135
Query: 138 AGGTDAQ 144
GGT+AQ
Sbjct: 136 TGGTEAQ 142
>gi|449129128|ref|ZP_21765359.1| peptide chain release factor 2 [Treponema denticola SP37]
gi|448945970|gb|EMB26835.1| peptide chain release factor 2 [Treponema denticola SP37]
Length = 320
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 108/164 (65%), Gaps = 2/164 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ P+L +++++V I EDL I RAGG GGQ+VNK ++AVRITHIPTG+ V
Sbjct: 157 HTSFTSVFAFPVL-DDTIEVDIRPEDLRIDTYRAGGAGGQHVNKTDSAVRITHIPTGIVV 215
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C +RSQ++N+ A++ LK++L EEQ+ E + + WG QIR+YVF PY
Sbjct: 216 ACQTQRSQISNRATAMNVLKSRLYNYYEEQKEKENMKFAAEKKGISWGNQIRSYVFQPYT 275
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKY-SMSLSASDA 306
+VKD RT +ET +I +VMDGE++ FI S+L K MS+ D+
Sbjct: 276 MVKDHRTKYETGNIQAVMDGEIDEFINSFLNTKIEDMSIDEDDS 319
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+K++I + ++ D +++L+EE S + L EE S + + + + LLS
Sbjct: 7 LKNRIYPWQELMDEVSDLEVLMELSEE--SGNEELSEEIGSSYNSVYEKYKKLSILSLLS 64
Query: 123 GPYDKEGAVISITAGAGGTDA 143
G DK A +++ AGAGGT+A
Sbjct: 65 GEVDKNDAYLTVHAGAGGTEA 85
>gi|315226283|ref|ZP_07868071.1| peptide chain release factor RF2 [Parascardovia denticolens DSM
10105 = JCM 12538]
gi|315120415|gb|EFT83547.1| peptide chain release factor RF2 [Parascardovia denticolens DSM
10105 = JCM 12538]
Length = 396
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 119/168 (70%), Gaps = 4/168 (2%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLL-PEESMDVQIPEEDLEISFSRAGGKGGQNVNKVE 189
++ I+ + QTSF+ EV+PL+ P + +DV P+ D+ + + G GGQ VN
Sbjct: 219 LVRISPFDNNSRRQTSFAAVEVIPLVEPTDHIDV--PDSDVRVDTYMSHGPGGQGVNTTY 276
Query: 190 TAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAE 249
+AVR+TH+PTG+ V +ERSQ+ N+ A++ L+++LLV+ +E+ A++ K++ GD +KA
Sbjct: 277 SAVRLTHLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLKQEEEAAKKKELAGD-IKAS 335
Query: 250 WGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKY 297
WG Q+R+YV HPY++VKD+RTG+ETSD +V DG+++ FI + +++++
Sbjct: 336 WGDQMRSYVLHPYQMVKDLRTGYETSDPQAVFDGDIDGFIDAGIRWRH 383
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
Y+ +D+ A + E I + GL L ++AELE +A+ WD+ AQ L+ +
Sbjct: 23 YDFTQDLGEARSKYETITQAVGLDSLRGKIAELEKQASAPGLWDDPETAQRVTSNLSASQ 82
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
+ LT+ ++DD T+ L E + D+ +EA S +K+L+K L E+ LL G
Sbjct: 83 AEYKRLTEAGQRLDDIDTLYSLGMEEEDEDSK--QEAWSELKKLSKDLSDIEIQTLLDGE 140
Query: 125 YDKEGAVISITAGAGGTDA 143
YD AV++I +GAGG DA
Sbjct: 141 YDNRAAVVTIRSGAGGVDA 159
>gi|402814026|ref|ZP_10863620.1| peptide chain release factor 2 [Paenibacillus alvei DSM 29]
gi|402507873|gb|EJW18394.1| peptide chain release factor 2 [Paenibacillus alvei DSM 29]
Length = 332
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/151 (45%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +V+P + +++ +++I EDL++ RA G GGQ++N ++AVRITHIPTG+ V
Sbjct: 174 HTSFVSCDVVPEITDDA-EIEIRTEDLKVDTYRASGAGGQHINTTDSAVRITHIPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A++ L++KL E++ ++ +IRGD + WG QIR+YVFHPY
Sbjct: 233 TCQTERSQIKNRERAMTHLRSKLYERKIEEQQKQLAEIRGDQMDIAWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDG+L+ FI +YL+
Sbjct: 293 MVKDHRTQVETGNVGAVMDGDLDTFIDAYLR 323
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M A D FWD+ +AQ + L +K + K +D + L + D L
Sbjct: 1 MAAPD--FWDDNDKAQGLISELNAIKSIVEQYGKLKQDYED--NEMMLELAEEEDDESLA 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EE + +++L +++ FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 57 EELTASVEKLLSSIENFELQLLLSEPYDKMNAILELHPGAGGTESQ 102
>gi|373454574|ref|ZP_09546440.1| peptide chain release factor 2 [Dialister succinatiphilus YIT
11850]
gi|371935849|gb|EHO63592.1| peptide chain release factor 2 [Dialister succinatiphilus YIT
11850]
Length = 332
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 99/151 (65%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS +VMP + ++ + V + +D+ + + R+ G GGQ++NK +AVR+THIPTG+
Sbjct: 174 HTSFSAVDVMPEI-DDDVQVDLNMDDVRVDYYRSSGAGGQHINKTSSAVRMTHIPTGIVA 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ NK + L L+AKL ++ E+ + GD EWG QIR+YVF PY
Sbjct: 233 ACQNERSQFQNKEQCLRLLRAKLYEFEMKKHEQEVNALEGDQQAIEWGSQIRSYVFQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RTG ET +I VMDG+++PFI+ +LK
Sbjct: 293 LVKDNRTGVETGNIQGVMDGDIDPFIEGFLK 323
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+D +FWD+ +A+ Q T+ KD T + + I+ L E D D + E
Sbjct: 2 SDPTFWDDADKARRISQEATEAKDAYETYTKLFERAEGLKDILDLAIEED--DQSMEPEI 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
A + E+ + LD+ E+ LLSG YD+ A+++ AGAGGT+AQ
Sbjct: 60 AKELNEVKEILDKKEIELLLSGKYDENNAILTFHAGAGGTEAQ 102
>gi|422344171|ref|ZP_16425097.1| peptide chain release factor 2 [Selenomonas noxia F0398]
gi|355377490|gb|EHG24707.1| peptide chain release factor 2 [Selenomonas noxia F0398]
Length = 368
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS +VMP + +++++V I +D+ + + RA G GGQ++NK +AVR+TH PTG+ V
Sbjct: 212 HTSFSACDVMPEI-DDAVEVPINMDDVRVDYFRASGAGGQHINKTSSAVRMTHEPTGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL NK + L L+AKL + +E++ EI ++ G K EWG QIR+YVF PY
Sbjct: 271 QCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEEIAKLEGVQQKIEWGSQIRSYVFQPYT 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKDVRT ET ++ +VMDG+++PFI++YL K
Sbjct: 331 MVKDVRTNAETGNVQAVMDGDIDPFIRAYLNAK 363
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 79/130 (60%), Gaps = 2/130 (1%)
Query: 15 SDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFK 74
++++++R S + E+++AELE K + SFWD+ A AQ+ Q L D+K ++ D
Sbjct: 13 GEKLDQMRISLEIPAKEEKIAELEYKMGEPSFWDDAAAAQKLNQELADLKGGVDTYRDLM 72
Query: 75 TKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISI 134
K +DA T+ ++ ++ DA + + + + +++ L+ +L LLSG YD A++++
Sbjct: 73 AKYEDAETLYEMG--IEENDASMEADIRAELTLISEGLETLQLEVLLSGEYDANDAILTL 130
Query: 135 TAGAGGTDAQ 144
AGAGGT+AQ
Sbjct: 131 HAGAGGTEAQ 140
>gi|269215856|ref|ZP_06159710.1| peptide chain release factor 2 [Slackia exigua ATCC 700122]
gi|269130806|gb|EEZ61882.1| peptide chain release factor 2 [Slackia exigua ATCC 700122]
Length = 364
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 165/324 (50%), Gaps = 33/324 (10%)
Query: 4 FYNLRKDVEAASDRVEEIRAS-----AGLQQLEKELAELEMKAADSSFWDNRAEAQETLQ 58
F++ + +A S R +IR++ A LE A LE+ D +F E E
Sbjct: 44 FWDDAQAAQATSKRASDIRSTLDEYRAACATLEDARAALELIEEDDAF---AVEFDELRA 100
Query: 59 ALTDVKDKINLLTDFKTKMDDAVTIVKLT------EEMDSTD----------------AG 96
L+ D++ + + F D IV + E D TD
Sbjct: 101 GLSSALDRMEVESWFTDPSDACDAIVSVNPGSGGLEAQDWTDMLYRMYVRYAEKKGWKVK 160
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGA--VISITAGAGGTDAQTSFSGAEVMP 154
LL+ + L++A+ Q E + G ++ I+ QT+F+G EV+P
Sbjct: 161 LLDVVPGEVIGLDRAVVQIEGKNAFGMLRSEHGVHRLVRISPTDDKKRRQTTFAGVEVLP 220
Query: 155 LLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLAN 214
++ E+ ++V+I D+ + R+ G GGQ VN ++AVR+TH+PTG+ V C E+SQL N
Sbjct: 221 VV-EDDIEVEINPSDVRVDVYRSSGPGGQCVNTTDSAVRLTHLPTGIVVTCQNEKSQLQN 279
Query: 215 KIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHET 274
K A L+AKL + ++R E+ +RG+ +G QIRNYV +PY+LVKDVR+G ET
Sbjct: 280 KESAFKVLRAKLYELERQKREDEMDALRGEKRDNSFGSQIRNYVLYPYQLVKDVRSGVET 339
Query: 275 SDIVSVMDGELEPFIKSYLKYKYS 298
++ +V+DG+++ F+ Y +++ S
Sbjct: 340 GNVDAVLDGQIDEFVIGYHRWRVS 363
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 4/130 (3%)
Query: 15 SDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFK 74
++R+ R +++ E+ L +L+ + FWD+ AQ T + +D++ ++
Sbjct: 13 AERLAAARGYLHIEENERRLHDLDAVISQPGFWDDAQAAQATSKRASDIRSTLDEYRAAC 72
Query: 75 TKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISI 134
++DA ++L EE D+ E A L+ ALD+ E+ + P D A++S+
Sbjct: 73 ATLEDARAALELIEEDDAFAVEFDELRAG----LSSALDRMEVESWFTDPSDACDAIVSV 128
Query: 135 TAGAGGTDAQ 144
G+GG +AQ
Sbjct: 129 NPGSGGLEAQ 138
>gi|224552865|gb|ACN55074.1| peptide chain release factor 2, programmed frameshift [Bacillus
anthracis str. 'Ames Ancestor']
Length = 365
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH PT V
Sbjct: 213 HTSFVSCEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 272 TCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE++PFI +YL+
Sbjct: 332 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLR 362
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 82/140 (58%), Gaps = 6/140 (4%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+++E + R+ R S L EK++AELE K + FWD++ AQ + +KD
Sbjct: 6 IRQELEKMAKRLAAFRGSLDLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKD- 64
Query: 67 INLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ F+ ++D+ +++T E+ + D L EE S +K L + ++++EL LLS P
Sbjct: 65 --MVGKFR-QLDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDP 121
Query: 125 YDKEGAVISITAGAGGTDAQ 144
YDK A++ + GAGGT++Q
Sbjct: 122 YDKNKAILELHPGAGGTESQ 141
>gi|30023221|ref|NP_834852.1| peptide chain release factor 2 [Bacillus cereus ATCC 14579]
gi|376269083|ref|YP_005121795.1| Peptide chain release factor 2 [Bacillus cereus F837/76]
gi|423554367|ref|ZP_17530693.1| peptide chain release factor 2 [Bacillus cereus ISP3191]
gi|423583335|ref|ZP_17559446.1| peptide chain release factor 2 [Bacillus cereus VD014]
gi|423589005|ref|ZP_17565091.1| peptide chain release factor 2 [Bacillus cereus VD045]
gi|423608477|ref|ZP_17584369.1| peptide chain release factor 2 [Bacillus cereus VD102]
gi|423631921|ref|ZP_17607668.1| peptide chain release factor 2 [Bacillus cereus VD154]
gi|423633970|ref|ZP_17609623.1| peptide chain release factor 2 [Bacillus cereus VD156]
gi|423644339|ref|ZP_17619956.1| peptide chain release factor 2 [Bacillus cereus VD166]
gi|423651027|ref|ZP_17626597.1| peptide chain release factor 2 [Bacillus cereus VD169]
gi|423658093|ref|ZP_17633392.1| peptide chain release factor 2 [Bacillus cereus VD200]
gi|29898781|gb|AAP12053.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus cereus
ATCC 14579]
gi|364514883|gb|AEW58282.1| Peptide chain release factor 2 [Bacillus cereus F837/76]
gi|401181165|gb|EJQ88318.1| peptide chain release factor 2 [Bacillus cereus ISP3191]
gi|401209395|gb|EJR16154.1| peptide chain release factor 2 [Bacillus cereus VD014]
gi|401225393|gb|EJR31942.1| peptide chain release factor 2 [Bacillus cereus VD045]
gi|401238486|gb|EJR44927.1| peptide chain release factor 2 [Bacillus cereus VD102]
gi|401263143|gb|EJR69276.1| peptide chain release factor 2 [Bacillus cereus VD154]
gi|401271404|gb|EJR77421.1| peptide chain release factor 2 [Bacillus cereus VD166]
gi|401280347|gb|EJR86268.1| peptide chain release factor 2 [Bacillus cereus VD169]
gi|401281876|gb|EJR87781.1| peptide chain release factor 2 [Bacillus cereus VD156]
gi|401288345|gb|EJR94098.1| peptide chain release factor 2 [Bacillus cereus VD200]
Length = 325
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH PT V
Sbjct: 173 HTSFVSCEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVV 231
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 232 TCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 291
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE++PFI +YL+
Sbjct: 292 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLR 322
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 3 AGFWDDQQGAQAVINEANALKD---MVGKFR-QLDETFENLEITHELLKEEYDEDLHEEL 58
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S +K L + ++++EL LLS PYDK A++ + GAGGT++Q
Sbjct: 59 ESEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQ 101
>gi|406986791|gb|EKE07300.1| hypothetical protein ACD_18C00125G0004 [uncultured bacterium]
Length = 366
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 106/152 (69%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P L EES DV+I ++D+ I AGG GGQ+VN +AVR+ HIPTG+TV
Sbjct: 213 HTSFALVEVIPEL-EESEDVKIDDKDIRIDTFMAGGNGGQSVNTTYSAVRLVHIPTGITV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C E+SQ N+ A+ L ++L + EE+ E ++RG+ EWG QIR+YV HPY
Sbjct: 272 TCQNEKSQQQNRKLAMKVLLSRLQKVQEEKDEEERLKLRGEYKSPEWGSQIRSYVLHPYH 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
+VKD+RT +ET+D V++GEL+PF+++YL++
Sbjct: 332 MVKDLRTRYETTDDEGVLNGELDPFVEAYLRF 363
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW ++ A + + ++D++ +I+L + + D + I ++ E D + E+
Sbjct: 45 FWKDQENATKKSREMSDLQAEIDLWGKYDKETKDLLEIAQMDEA--DKDVNMREDIEKQY 102
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
L K + + E L G +DKE A+++I +G+GGT+AQ
Sbjct: 103 VVLEKNILKLEFKTLFDGKHDKESAIVAIHSGSGGTEAQ 141
>gi|226225057|ref|YP_002759164.1| peptide chain release factor 2 [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|258611946|ref|ZP_05243310.2| peptide chain release factor 2 [Listeria monocytogenes FSL R2-503]
gi|293596308|ref|ZP_05230370.2| peptide chain release factor 2 [Listeria monocytogenes FSL J1-194]
gi|293596920|ref|ZP_05265609.2| peptide chain release factor 2 [Listeria monocytogenes HPB2262]
gi|300764992|ref|ZP_07074980.1| peptide chain release factor 2 [Listeria monocytogenes FSL N1-017]
gi|404282067|ref|YP_006682965.1| peptide chain release factor 2 [Listeria monocytogenes SLCC2755]
gi|404287880|ref|YP_006694466.1| peptide chain release factor 2 [Listeria monocytogenes serotype 7
str. SLCC2482]
gi|405750854|ref|YP_006674320.1| peptide chain release factor 2 [Listeria monocytogenes ATCC 19117]
gi|405753717|ref|YP_006677182.1| peptide chain release factor 2 [Listeria monocytogenes SLCC2378]
gi|406705244|ref|YP_006755598.1| peptide chain release factor 2 [Listeria monocytogenes L312]
gi|424715322|ref|YP_007016037.1| Peptide chain release factor 2 [Listeria monocytogenes serotype 4b
str. LL195]
gi|424824259|ref|ZP_18249272.1| Peptide chain release factor 2 [Listeria monocytogenes str. Scott
A]
gi|225877519|emb|CAS06233.1| Putative peptide chain release factor 2 [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258607352|gb|EEW19960.1| peptide chain release factor 2 [Listeria monocytogenes FSL R2-503]
gi|293583807|gb|EFF95839.1| peptide chain release factor 2 [Listeria monocytogenes HPB2262]
gi|293594612|gb|EFG02373.1| peptide chain release factor 2 [Listeria monocytogenes FSL J1-194]
gi|300514292|gb|EFK41351.1| peptide chain release factor 2 [Listeria monocytogenes FSL N1-017]
gi|332312939|gb|EGJ26034.1| Peptide chain release factor 2 [Listeria monocytogenes str. Scott
A]
gi|404220054|emb|CBY71418.1| peptide chain release factor 2 [Listeria monocytogenes ATCC 19117]
gi|404222917|emb|CBY74280.1| peptide chain release factor 2 [Listeria monocytogenes SLCC2378]
gi|404228702|emb|CBY50107.1| peptide chain release factor 2 [Listeria monocytogenes SLCC2755]
gi|404246809|emb|CBY05034.1| peptide chain release factor 2 [Listeria monocytogenes serotype 7
str. SLCC2482]
gi|406362274|emb|CBY68547.1| peptide chain release factor 2 [Listeria monocytogenes L312]
gi|424014506|emb|CCO65046.1| Peptide chain release factor 2 [Listeria monocytogenes serotype 4b
str. LL195]
Length = 338
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++ +++++ EDL+I RA G GGQ++N ++AVR+THIP+G+ V
Sbjct: 185 HTSFVSVDVMPEL-DDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVV 243
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQL N+ +A+ LK KL +E++ E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 244 TCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYS 303
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 304 MVKDHRTNYETGNIQAVMDGDLDEFINAYLR 334
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E +AELE + D +FW+++ AQ+ + K+ + + + ++L +E
Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D L EE IK + +FEL +LS PYDK A++ + GAGGT++Q
Sbjct: 61 --EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQ 113
>gi|334127093|ref|ZP_08501023.1| peptide chain release factor RF2 [Centipeda periodontii DSM 2778]
gi|333390055|gb|EGK61207.1| peptide chain release factor RF2 [Centipeda periodontii DSM 2778]
Length = 368
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS +VMP + +++++V I +D+ + + RA G GGQ++NK +AVR+TH PTG+ V
Sbjct: 212 HTSFSACDVMPEI-DDAVEVPINMDDVRVDYFRASGAGGQHINKTSSAVRMTHEPTGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL NK + L L+AKL + +E++ EI ++ G K EWG QIR+YVF PY
Sbjct: 271 QCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEEIAKLEGVQQKIEWGSQIRSYVFQPYT 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKDVRT ET ++ +VMDG+++PFI++YL K
Sbjct: 331 MVKDVRTNAETGNVQAVMDGDIDPFIRAYLNAK 363
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 77/131 (58%), Gaps = 4/131 (3%)
Query: 15 SDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFK 74
++++++R S + E+++AELE K ++ SFWD+ A AQ+ Q L +K ++ D
Sbjct: 13 GEKLDQMRISLEIPAKEEKIAELEYKMSEPSFWDDAAAAQKLNQELAALKGGVDTYRDLM 72
Query: 75 TKMDDAVTIVKL-TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVIS 133
K +DA T+ ++ EE D + + ++I E L+ +L LLSG YD A+++
Sbjct: 73 AKYEDAETLYEMGIEESDPSMEADIRAELTLIAE---GLETLQLEVLLSGEYDANDAILT 129
Query: 134 ITAGAGGTDAQ 144
+ AGAGGT+AQ
Sbjct: 130 LHAGAGGTEAQ 140
>gi|290892673|ref|ZP_06555665.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-071]
gi|386009226|ref|YP_005927504.1| peptide chain release factor 2 [Listeria monocytogenes L99]
gi|404408886|ref|YP_006691601.1| peptide chain release factor 2 [Listeria monocytogenes SLCC2376]
gi|404414526|ref|YP_006700113.1| peptide chain release factor 2 [Listeria monocytogenes SLCC7179]
gi|422810539|ref|ZP_16858950.1| peptide chain release factor 2, prfB [Listeria monocytogenes FSL
J1-208]
gi|290557733|gb|EFD91255.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-071]
gi|307572036|emb|CAR85215.1| peptide chain release factor 2 [Listeria monocytogenes L99]
gi|378751429|gb|EHY62019.1| peptide chain release factor 2, prfB [Listeria monocytogenes FSL
J1-208]
gi|404240225|emb|CBY61626.1| peptide chain release factor 2 [Listeria monocytogenes SLCC7179]
gi|404243035|emb|CBY64435.1| peptide chain release factor 2 [Listeria monocytogenes SLCC2376]
Length = 338
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++ +++++ EDL+I RA G GGQ++N ++AVR+THIP+G+ V
Sbjct: 185 HTSFVSVDVMPEL-DDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVV 243
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQL N+ +A+ LK KL +E++ E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 244 TCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYS 303
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 304 MVKDHRTNYETGNIQAVMDGDLDDFINAYLR 334
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E +AELE + D +FW+++ AQ+ + K+ + + + ++L +E
Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D L EE IK + +FEL +LS PYDK A++ + GAGGT++Q
Sbjct: 61 --EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQ 113
>gi|168185950|ref|ZP_02620585.1| peptide chain release factor 2 [Clostridium botulinum C str.
Eklund]
gi|169295927|gb|EDS78060.1| peptide chain release factor 2 [Clostridium botulinum C str.
Eklund]
Length = 326
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 103/152 (67%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P L E+ D++I +DL + RA G GGQ++NK ++AVRITHIPTG+ V
Sbjct: 174 QTSFASLEVIPEL-RENQDIEIKADDLRVDTYRASGAGGQHINKTDSAVRITHIPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ ERSQ NK A+S LK+KL+ + E +I+ + GD + WG QIR+YVF PY
Sbjct: 233 QSQSERSQFQNKDTAMSMLKSKLIELKERAHKEKIEDLSGDLKEIGWGSQIRSYVFQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
+VKD RT E ++ +VMDG+++ FI YLK+
Sbjct: 293 MVKDHRTNTEMGNVDAVMDGDIDNFILQYLKF 324
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 66/102 (64%), Gaps = 2/102 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+S FWD+ +AQE Q +KD+I+ + KT+++D +++++ E + + +EE
Sbjct: 3 ESDFWDDINKAQEITQEAKGLKDRIDGYNNTKTRIEDLEVLIEISIEEEDESS--IEEIL 60
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ IKE+ +D F++ LLSG YDK A++S+ +GAGGTDAQ
Sbjct: 61 NEIKEIEIIIDDFKVQILLSGEYDKNNAIVSLHSGAGGTDAQ 102
>gi|255659162|ref|ZP_05404571.1| peptide chain release factor 2 [Mitsuokella multacida DSM 20544]
gi|260848613|gb|EEX68620.1| peptide chain release factor 2 [Mitsuokella multacida DSM 20544]
Length = 368
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 107/153 (69%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ ++MP + +++++V I D+ + RA G GGQ++NK +AVR+TH+PTG+ V
Sbjct: 212 HTSFAACDIMPEI-DDNVEVNINMSDVRVDTYRASGAGGQHINKTSSAVRMTHMPTGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL N+ + L L+AKL + E++ +E+ ++ GD K EWG QIR+YVF PY
Sbjct: 271 QCQNERSQLQNREQCLKMLRAKLFELEMEKKEAELAKLEGDQQKIEWGSQIRSYVFQPYT 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT ET ++ +VMDG+++ FI+++L K
Sbjct: 331 MVKDHRTNVETGNVQAVMDGDIDMFIRAFLAAK 363
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 70/114 (61%), Gaps = 2/114 (1%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
E+++AELE K + +FWD+ +AQ+ Q L DVK ++ + K +DA T+ ++ M
Sbjct: 29 EEKIAELEYKMGEPTFWDDAEKAQKINQELNDVKISVDKYKNLVAKFEDAQTLWEMG--M 86
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ D + E+ S + + + L+ +L LLSGPYD A++++ AGAGGT+AQ
Sbjct: 87 EEQDESMEEDVKSELAAVAEGLESLQLEVLLSGPYDANNAILTLHAGAGGTEAQ 140
>gi|65317159|ref|ZP_00390118.1| COG1186: Protein chain release factor B [Bacillus anthracis str.
A2012]
Length = 325
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH PT V
Sbjct: 173 HTSFVSCEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVV 231
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 232 TCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 291
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE++PFI +YL+
Sbjct: 292 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLR 322
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 3 AGFWDDQQGAQAVINEANALKD---MVGKFR-QLDETFENLEITHELLKEEYDEDLHEEL 58
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S +K L + ++++EL LLS PYDK A++ + GAGGT++Q
Sbjct: 59 ESEVKGLIQEMNEYELQLLLSDPYDKNKAILELHPGAGGTESQ 101
>gi|291528563|emb|CBK94149.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
rectale M104/1]
Length = 330
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 104/152 (68%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF +VMP + EE +D+++ ++D+ I R+ G GGQ++NK +A+RITH P+G+ V
Sbjct: 174 QTSFVSCDVMPDI-EEDLDIEVKDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ NK KA+ LKAKL ++ +E+ A++ IRG+ + WG QIR+YV PY
Sbjct: 233 QCQNERSQHMNKDKAMQMLKAKLYLLKQEENAAKEAGIRGEVKEIGWGSQIRSYVLQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
+VKD RT ET + +V+DG ++ FI YLK+
Sbjct: 293 MVKDHRTDVETGNADAVLDGNIDIFINGYLKW 324
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M+A D FWD+ ++Q ++ L +KD + K + +D T++++ E D L+
Sbjct: 1 MEAPD--FWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEMGYE--ENDESLI 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
E ++ + D + LLSG YDK A++ + AGAGGT++
Sbjct: 57 PEIQQMLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTES 101
>gi|269850236|gb|ACZ49981.1| peptide chain release factor 2, programmed frameshift [Bacillus
anthracis str. Ames]
Length = 365
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH PT V
Sbjct: 213 HTSFVSCEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVV 271
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 272 TCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 331
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE++PFI +YL+
Sbjct: 332 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLR 362
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 82/140 (58%), Gaps = 6/140 (4%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+++E + R+ R S L EK++AELE K + FWD++ AQ + +KD
Sbjct: 6 IRQELEKMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKD- 64
Query: 67 INLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ F+ ++D+ +++T E+ + D L EE S +K L + ++++EL LLS P
Sbjct: 65 --MVGKFR-QLDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDP 121
Query: 125 YDKEGAVISITAGAGGTDAQ 144
YDK A++ + GAGGT++Q
Sbjct: 122 YDKNKAILELHPGAGGTESQ 141
>gi|386044811|ref|YP_005963616.1| peptide chain release factor 2 [Listeria monocytogenes 10403S]
gi|404411751|ref|YP_006697339.1| peptide chain release factor 2 [Listeria monocytogenes SLCC5850]
gi|345538045|gb|AEO07485.1| peptide chain release factor 2 [Listeria monocytogenes 10403S]
gi|404231577|emb|CBY52981.1| peptide chain release factor 2 [Listeria monocytogenes SLCC5850]
Length = 338
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++ +++++ EDL+I RA G GGQ++N ++AVR+THIP+G+ V
Sbjct: 185 HTSFVSVDVMPEL-DDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVV 243
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQL N+ +A+ LK KL +E++ E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 244 TCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYS 303
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 304 MVKDHRTNYETGNIQAVMDGDLDDFINAYLR 334
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E +AELE + D +FW+++ AQ+ + K+ + + + ++L +E
Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNVYKETYQAFHALEEEQESMEISLELLKE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D L EE IK + +FEL +LS PYDK A++ + GAGGT++Q
Sbjct: 61 --EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQ 113
>gi|282903384|ref|ZP_06311275.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
C160]
gi|282596339|gb|EFC01300.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
C160]
Length = 331
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 104/151 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH P+G+ V
Sbjct: 175 HTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 235 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYS 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 295 MVKDHRTNEETGKVDAVMDGDVGPFIESYLR 325
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ +FWDN+ +AQ+ + +K +N + ++DD L +E D + E+
Sbjct: 3 AEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQE--EFDGEMKEDL 60
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +D++EL LL GP+D A++ + GAGGT++Q
Sbjct: 61 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQ 103
>gi|406947899|gb|EKD78745.1| hypothetical protein ACD_41C00281G0010 [uncultured bacterium]
Length = 365
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 104/151 (68%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P L E S V+I +ED+ I R+GGKGGQ VN ++AVRITH+ T + V
Sbjct: 204 QTSFALIEVLPELGELS-PVEIKDEDIRIDVYRSGGKGGQGVNTTDSAVRITHLSTNIVV 262
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ NK A+ L+AKL + E +E ++RG+ AEWG QIR+YV HPYK
Sbjct: 263 TCQNERSQHQNKATAMKILRAKLHQLQLEAEQAEKLKLRGEYTSAEWGNQIRSYVLHPYK 322
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT +E SD SV++GEL+ F+++YL+
Sbjct: 323 MVKDHRTEYEVSDPDSVLNGELDGFVEAYLR 353
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 2/128 (1%)
Query: 17 RVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTK 76
R+ I + + ++A LE + + FW N + AQ+ + + D++ +I + +
Sbjct: 7 RITTIGEQLNIAGMRAKVAALEAEMSQPDFWQNPSHAQQVGRVVNDLRKEIATWEQVQQQ 66
Query: 77 MDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITA 136
+ +L E+ D L +E K+L + + E L YD AV++I A
Sbjct: 67 ATSLQEMAQLNEQ--ERDPDLTKELEQQQKKLERQFAELEFHLLFGKKYDDASAVLAIHA 124
Query: 137 GAGGTDAQ 144
GAGG DAQ
Sbjct: 125 GAGGVDAQ 132
>gi|116617317|ref|YP_817688.1| peptide chain release factor 2 [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|381335792|ref|YP_005173567.1| peptide chain release factor 2 [Leuconostoc mesenteroides subsp.
mesenteroides J18]
gi|122272482|sp|Q03ZQ7.1|RF2_LEUMM RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|116096164|gb|ABJ61315.1| bacterial peptide chain release factor 2 (bRF-2) [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
gi|356643758|gb|AET29601.1| peptide chain release factor 2 [Leuconostoc mesenteroides subsp.
mesenteroides J18]
Length = 372
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 111/156 (71%), Gaps = 1/156 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++S++V++ ++D+++ R+GG GGQNVNKV T VR+TH PTG+ V
Sbjct: 214 HTSFVSVDVMPEL-DDSIEVEVRDDDVKMDVFRSGGAGGQNVNKVSTGVRLTHEPTGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T ER+Q N+ A+ LK+KL + E++ +E + G+ ++ WG QIR+YV HPY+
Sbjct: 273 SSTVERTQYGNRDYAMRLLKSKLYQLELEKKEAERAALTGEKMENGWGSQIRSYVLHPYQ 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSM 299
+VKD RT +ET+ +V+DG+L+PFI +YL+++ S+
Sbjct: 333 MVKDHRTNYETNQPQAVLDGDLDPFINAYLQWQLSL 368
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
V + +E R + ++ L +E+A+ E + + FW++ +AQ+ ++ +K++ +
Sbjct: 10 VSDMQENIERFRGTLDMEALTEEIADYENRMTEPDFWNDNEKAQKVIEENNVLKNRRDSF 69
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
+ ++++ ++++ E D D L E + + + K +D + L QLL+ PYD A
Sbjct: 70 LNLTNQVEELELLIEMAVE-DPEDEDTLGELEAGVAKAQKDIDAYNLEQLLTEPYDANNA 128
Query: 131 VISITAGAGGTDA 143
++ I G+GGT++
Sbjct: 129 ILEIHPGSGGTES 141
>gi|374308692|ref|YP_005055123.1| peptide chain release factor 2 [Filifactor alocis ATCC 35896]
gi|291167022|gb|EFE29068.1| peptide chain release factor 2 [Filifactor alocis ATCC 35896]
Length = 338
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 105/164 (64%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ TSF+ +V+P + +++++V I DL+I RA G GGQ+VNK ++
Sbjct: 170 IVRISPFDSSGKRHTSFTSVDVIPEM-DDTVEVDIDTNDLKIDTYRASGAGGQHVNKTDS 228
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVRITHIPTG+ + C ERSQ +N+ A+ L +KL+ I + +I+ I G+ + W
Sbjct: 229 AVRITHIPTGIVITCQNERSQHSNRETAMKMLFSKLMDIKIREHKEKIEDISGEYSQIAW 288
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIR+YVF PY LVKD RT HE + SVMDG + PFI +YLK
Sbjct: 289 GSQIRSYVFQPYTLVKDHRTNHEIGSVQSVMDGNIMPFINAYLK 332
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 69/114 (60%), Gaps = 6/114 (5%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
EK+ +L+M+ AD FW+N +Q ++ +++ +++ + +++++ + +LT+E
Sbjct: 4 EKQQNDLKMEDAD--FWNNLELSQHIVKRNKELERTLDIYSSAFSELEEVEILFELTKE- 60
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D+ L +E I EL++ ++Q ++ LL G YD A++SI AG+GG DAQ
Sbjct: 61 ---DSELEKELEQCINELSEKMEQLKIQTLLDGEYDGNNAILSIHAGSGGLDAQ 111
>gi|88803344|ref|ZP_01118870.1| peptide chain release factor RF-2 [Polaribacter irgensii 23-P]
gi|88780910|gb|EAR12089.1| peptide chain release factor RF-2 [Polaribacter irgensii 23-P]
Length = 365
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 102/150 (68%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
T+F V P+ ++S+++ + D+EI +R+ G GGQNVNKVET V++TH PTG+ +
Sbjct: 208 HTTFGSVYVFPV-ADDSIEIAVNPADIEIVTARSSGAGGQNVNKVETKVQLTHKPTGIQI 266
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C+ RSQ N+ A+ LK++L I +++ + I +K EWG QIRNYV HPYK
Sbjct: 267 QCSNSRSQHDNRATAMKMLKSQLYEIELKKQQATRADIEAGKLKNEWGSQIRNYVMHPYK 326
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRT +ET ++ +VMDG + PF+KSYL
Sbjct: 327 LVKDVRTAYETGNVDAVMDGNINPFLKSYL 356
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 10/132 (7%)
Query: 15 SDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFK 74
+DR+E++++ + + E+A E K + FWD+ EA+ A+ +++ K +TD++
Sbjct: 11 ADRIEKLKSYLEIDKKLIEIANEEEKTTNPGFWDHPKEAE---VAIKELRFKKKWVTDYQ 67
Query: 75 ---TKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAV 131
T DD + + + +E D + + E+ ++++ L+ E +LS D A
Sbjct: 68 HAITLNDDVIVLYEFYKEGDVAETEMDEQ----FEKVSSFLEDIEFRNMLSEEGDSLAAT 123
Query: 132 ISITAGAGGTDA 143
I ITAGAGGT++
Sbjct: 124 IQITAGAGGTES 135
>gi|150388626|ref|YP_001318675.1| peptide chain release factor 2 [Alkaliphilus metalliredigens QYMF]
gi|149948488|gb|ABR47016.1| peptide chain release factor 2 [Alkaliphilus metalliredigens QYMF]
Length = 329
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 107/152 (70%), Gaps = 1/152 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++S++V+I DL+I RA G GGQ+VNK ++AVRITHIPTG+ V
Sbjct: 173 HTSFASVDVMPEL-DDSIEVEINPNDLKIDTYRASGAGGQHVNKTDSAVRITHIPTGLVV 231
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C +RSQ +N+ ++ LKAKL+ + E ++ +I+ ++G+ + WG QIR+YVF+PY
Sbjct: 232 QCQNQRSQHSNRETSMKMLKAKLIELKEREQKEKIEDLQGEYSQIAWGSQIRSYVFNPYN 291
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 295
L KD RT E +I SVMDG+++ FI YL +
Sbjct: 292 LAKDHRTNTEMGNIQSVMDGDIDLFINEYLTW 323
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 45 SFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASI 104
+FWD++ +AQE L+ VKD+I + ++ ++ TEE D T L+E
Sbjct: 5 NFWDDQDKAQEILKEAKMVKDRIEDYQSVIDQTEEVQMMITFTEEGDQTFEKELKET--- 61
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
I +L+ + + LL G YD+ ++SI AG GG DAQ
Sbjct: 62 INQLDVRVKTMKTATLLQGQYDRFSVILSIHAGTGGLDAQ 101
>gi|403739010|ref|ZP_10951611.1| peptide chain release factor 2 [Austwickia chelonae NBRC 105200]
gi|403191660|dbj|GAB78381.1| peptide chain release factor 2 [Austwickia chelonae NBRC 105200]
Length = 383
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 117/164 (71%), Gaps = 4/164 (2%)
Query: 144 QTSFSGAEVMPLLPEESMD-VQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVT 202
QTSF+ EV+PL+ ES D + IPE +L+I R+ G GGQ+VN ++AVR+THIPTG+
Sbjct: 223 QTSFAAVEVIPLI--ESTDTIDIPESELKIDVFRSSGPGGQSVNTTDSAVRMTHIPTGIV 280
Query: 203 VRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPY 262
V E+SQ+ N+ AL L+++LL++ +++ ++ K++ GD VKA WG Q+R+YV HPY
Sbjct: 281 VSMQNEKSQIQNRAAALRVLQSRLLLLKKQEEDAKKKELAGD-VKASWGDQMRSYVLHPY 339
Query: 263 KLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDA 306
++VKD+RT HE + V DG+++ F+++ +++K S+ A+++
Sbjct: 340 QMVKDLRTEHEVGNTSGVFDGDIDAFLEAGIRWKRSLEREAANS 383
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 1/123 (0%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
+R + L+ + +LE A+ WD++ AQ L+ ++ + ++++D
Sbjct: 29 VRQVTDVDTLKARITDLEKAASAPDLWDDQENAQAVTSRLSRANAELERIEGMDSRIEDL 88
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
+V++ E D DA L EA + L KA+ + E+ LL+G YD+ AV++I +GAGG
Sbjct: 89 EVLVEMATE-DGGDAETLAEAEDELASLRKAVGELEVRTLLNGEYDEREAVVTIRSGAGG 147
Query: 141 TDA 143
DA
Sbjct: 148 VDA 150
>gi|239636633|ref|ZP_04677635.1| peptide chain release factor 2 [Staphylococcus warneri L37603]
gi|239597988|gb|EEQ80483.1| peptide chain release factor 2 [Staphylococcus warneri L37603]
Length = 330
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 105/153 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH PTG+ V
Sbjct: 175 HTSFASCDVIPDFDNDEIEIEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++ E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 235 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYS 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT ET + +VMDG++ PFI++YL+++
Sbjct: 295 MVKDHRTNEETGKVDAVMDGDIGPFIEAYLRHQ 327
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FWD++ AQ+ + +K +N + + ++D V+L +E D + +E
Sbjct: 4 EPNFWDDQNRAQDIIDKNNALKSMVNGYYELEESVEDMSATVELLQE--EFDEDMKQELE 61
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ + E +D FEL LL GPYD A++ + GAGGT++Q
Sbjct: 62 NNVVEFKAEIDHFELQLLLDGPYDANNAILELHPGAGGTESQ 103
>gi|225867150|ref|YP_002752528.1| peptide chain release factor 2, programmed frameshift, partial
[Bacillus cereus 03BB102]
gi|225787101|gb|ACO27318.1| peptide chain release factor 2, programmed frameshift [Bacillus
cereus 03BB102]
Length = 380
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH PT V
Sbjct: 228 HTSFVSCEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVV 286
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 287 TCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 346
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE++PFI +YL+
Sbjct: 347 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLR 377
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 82/140 (58%), Gaps = 6/140 (4%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+++E + R+ R S L EK++AELE K + FWD++ AQ + +KD
Sbjct: 21 IRQELEKMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKD- 79
Query: 67 INLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ F+ ++D+ +++T E+ + D L EE S +K L + ++++EL LLS P
Sbjct: 80 --MVGKFR-QLDETFENLEITHELLKEEYDEELHEELESEVKGLIQEMNEYELQLLLSDP 136
Query: 125 YDKEGAVISITAGAGGTDAQ 144
YDK A++ + GAGGT++Q
Sbjct: 137 YDKNNAILELHPGAGGTESQ 156
>gi|374852036|dbj|BAL54979.1| peptide chain release factor RF-2 [uncultured Chloroflexi
bacterium]
Length = 311
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 101/151 (66%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ EV+P + + V I +DL+I RA GGQNV K TAVRITHIPTG+ V
Sbjct: 154 HTSFAMVEVLPQIAMDDPVVVIDPKDLKIDVYRASSAGGQNVQKNATAVRITHIPTGIVV 213
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ NK A+ L+A+L + ++ EI +RG+ VKAEWG QIR+YV HPY+
Sbjct: 214 TCENERSQTQNKETAMRILRARLFELKRAEKEEEIALLRGEYVKAEWGNQIRSYVLHPYQ 273
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT +ET + +V+DGE++ F+ +YL+
Sbjct: 274 MVKDHRTDYETGNTQAVLDGEIDDFMIAYLR 304
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 57 LQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFE 116
++ L D+++ + F+ ++ DA+ + +L +E L EE + L + +Q
Sbjct: 1 MRRLADLRETVETWQAFQQRLHDALELCQLEDE------SLREELEKEVHSLEEEFEQKS 54
Query: 117 LTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+LSGPYD A+++I AGAGGTD+Q
Sbjct: 55 FAAMLSGPYDAGDALLAIHAGAGGTDSQ 82
>gi|431414449|ref|ZP_19512268.1| peptide chain release factor 2 [Enterococcus faecium E1630]
gi|431759663|ref|ZP_19548274.1| peptide chain release factor 2 [Enterococcus faecium E3346]
gi|430589182|gb|ELB27327.1| peptide chain release factor 2 [Enterococcus faecium E1630]
gi|430625844|gb|ELB62447.1| peptide chain release factor 2 [Enterococcus faecium E3346]
Length = 327
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 103/151 (68%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L +E++D++I +DL+I RA G GGQ++NK E+AVRITH+PTG V
Sbjct: 174 HTSFCSVDVMPEL-DETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTGTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQL N+ +A+ LKAKL + E++ E +RG+ + WG QIR+YVFHPY
Sbjct: 233 ASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDG+L+ I YLK
Sbjct: 293 MVKDHRTNVETGNVQAVMDGDLDLLIDGYLK 323
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FWD+ AQ+ + K+ + ++++ +V++ +E DA + EEA
Sbjct: 2 AEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVEMLQE--EPDAAMQEEA 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ I L++ + +EL+ LL GPYD+ A++ + GAGGT++Q
Sbjct: 60 ETRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQ 102
>gi|386027838|ref|YP_005948614.1| peptide chain release factor RF2 [Listeria monocytogenes M7]
gi|336024419|gb|AEH93556.1| peptide chain release factor RF2 [Listeria monocytogenes M7]
Length = 327
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++ +++++ EDL+I RA G GGQ++N ++AVR+THIP+G+ V
Sbjct: 174 HTSFVSVDVMPEL-DDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQL N+ +A+ LK KL +E++ E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 293 MVKDHRTNYETGNIQAVMDGDLDDFINAYLR 323
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
D +FW+++ AQ+ + K+ + + + ++L +E D L EE
Sbjct: 3 DPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE--EADEDLQEELE 60
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
IK + +FEL +LS PYDK A++ + GAGGT++Q
Sbjct: 61 KDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQ 102
>gi|445060263|ref|YP_007385667.1| peptide chain release factor 2 [Staphylococcus warneri SG1]
gi|443426320|gb|AGC91223.1| peptide chain release factor 2 [Staphylococcus warneri SG1]
Length = 329
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/153 (43%), Positives = 105/153 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH PTG+ V
Sbjct: 174 HTSFASCDVIPDFDNDEIEIEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVV 233
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++ E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 234 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYS 293
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT ET + +VMDG++ PFI++YL+++
Sbjct: 294 MVKDHRTNEETGKVDAVMDGDIGPFIEAYLRHQ 326
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+ +FWD++ AQ+ + +K +N + + ++D V+L +E D + +E
Sbjct: 2 TEPNFWDDQNRAQDIIDKNNALKSMVNGYYELEETVEDMSATVELLQE--EFDEDMKQEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ + E +D FEL LL GPYD A++ + GAGGT++Q
Sbjct: 60 ENNVIEFKSEIDHFELQLLLDGPYDANNAILELHPGAGGTESQ 102
>gi|268611479|ref|ZP_06145206.1| hypothetical protein RflaF_18501 [Ruminococcus flavefaciens FD-1]
Length = 372
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 129/216 (59%), Gaps = 20/216 (9%)
Query: 84 VKLTEEMDSTDAGLLEEAASIIKELNKALDQFE----LTQLLS-GPYDKEGAVISITAGA 138
V+L + +D +AG+ ++ASI+ E A + + +L+ P+D +G
Sbjct: 163 VELLDYLDGDEAGM--KSASILIEGENAYGYMKSESGVHRLVRVSPFDAQGR-------- 212
Query: 139 GGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 198
TSF+ EVMP L ++S++V I ED+E+ R+ G GGQ VNK +AVR+ H P
Sbjct: 213 ----RHTSFAALEVMPEL-DDSIEVDIRPEDIEMEVYRSSGAGGQKVNKTSSAVRLIHKP 267
Query: 199 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 258
TG+ V C +RSQ NK A+ L++KL+ I E + +I+ I+G + WG QIR+YV
Sbjct: 268 TGIVVSCQTQRSQYQNKDYAMKMLRSKLIEIKEREHLEKIEDIKGVQNQIAWGSQIRSYV 327
Query: 259 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
F PY LVKD RTG E +I +VMDG+++ FI +YLK
Sbjct: 328 FMPYTLVKDTRTGFENGNIQAVMDGDIDGFINAYLK 363
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 74/138 (53%), Gaps = 2/138 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
LR ++ +EE+ ++ +K +AEL + A FWD+ +Q+ L+ ++ K
Sbjct: 7 LRVEMTGYRKEMEELADVLNIENAKKRVAELGDETAKEGFWDDLENSQKVLKEQKSLERK 66
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
I ++D +T+++L+ +++ D +EE + + L+ +L+ LL+G YD
Sbjct: 67 IEKFNKLNDSLEDLITLIELS--IEAEDESDIEEIKAEAESFKSKLEDEKLSTLLTGEYD 124
Query: 127 KEGAVISITAGAGGTDAQ 144
A+++ AGAGGT+AQ
Sbjct: 125 GANAILTFHAGAGGTEAQ 142
>gi|139438906|ref|ZP_01772366.1| Hypothetical protein COLAER_01370 [Collinsella aerofaciens ATCC
25986]
gi|133775617|gb|EBA39437.1| peptide chain release factor 2 [Collinsella aerofaciens ATCC 25986]
Length = 382
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 107/153 (69%), Gaps = 2/153 (1%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QT+F+G EV+P+LP++ +D++I +D+ + A G GGQ VN ++AVR+TH P+G+ V
Sbjct: 219 QTTFAGVEVIPVLPDD-IDIEISPDDIRVDVYHASGPGGQGVNTTDSAVRVTHFPSGIVV 277
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ NK + LKA+L I E+RA + +IRG +G QIR+YV +PY+
Sbjct: 278 TCQNERSQIQNKAACMQILKARLYEIELEKRAEALDEIRGPKTTIGFGNQIRSYVLYPYQ 337
Query: 264 LVKDVRTGHETSDIVSVM-DGELEPFIKSYLKY 295
+VKD+R+G ETS++ +V+ DG+L+PF+ Y ++
Sbjct: 338 MVKDLRSGVETSNVEAVLDDGDLDPFVIGYHRW 370
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Query: 10 DVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINL 69
+++A +DR+ E+ + L + ++ELE K+ FWD+ A+ T++ + K+ I
Sbjct: 11 ELDAFADRLGEVESYLHLDEKRTRVSELEAKSVAPGFWDDADAARATMEEIARTKEDIAA 70
Query: 70 LTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDK 127
+ + ++ DA ++L EEM D A L EEAA+ + L +A+D+ EL+ +G +D
Sbjct: 71 VDTARGELSDARAALELAEEMGDDPDAAALREEAAATAERLARAIDELELSSWFTGEFDH 130
Query: 128 EGAVISITAGAGGTDAQ 144
A+++I G GG +AQ
Sbjct: 131 GDAIVTIKPGQGGLEAQ 147
>gi|323140697|ref|ZP_08075618.1| peptide chain release factor 2 [Phascolarctobacterium succinatutens
YIT 12067]
gi|322414821|gb|EFY05619.1| peptide chain release factor 2 [Phascolarctobacterium succinatutens
YIT 12067]
Length = 329
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 104/151 (68%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +VMP L ++++DV I +++ + R+ G GGQ+VNK +AVR+TH PTG+ V
Sbjct: 174 HTSFAAVDVMPEL-DDTVDVNINMDEVRVDVYRSSGAGGQHVNKTSSAVRMTHEPTGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQ+ N+ + L L+AKL + ++ + + I GD EWG QIR+YVF PY
Sbjct: 233 QCQNERSQIQNRERCLQMLRAKLYEYEKAKQDALVSDIAGDYQNIEWGSQIRSYVFQPYT 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RTG ET +I +VMDG+L PF+++YL+
Sbjct: 293 MVKDHRTGCETGNIQAVMDGDLMPFVEAYLR 323
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
D +FWD+ +AQ+T Q + +K++++ +DD + ++ E D LL E
Sbjct: 2 GDPTFWDDPEKAQKTAQDVNSLKEEVDGFHKLSAGVDDLEALQEMAAE--ENDESLLPEM 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
++ + L+ EL LLSG YD A++++ AGAGGT+AQ
Sbjct: 60 DELLAKCRSELEHLELGMLLSGEYDANNAILTLHAGAGGTEAQ 102
>gi|227431353|ref|ZP_03913406.1| peptide chain release factor RF2 [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227352946|gb|EEJ43119.1| peptide chain release factor RF2 [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 372
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 111/156 (71%), Gaps = 1/156 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++S++V++ ++D+++ R+GG GGQNVNKV T VR+TH PTG+ V
Sbjct: 214 HTSFVSVDVMPEL-DDSIEVEVRDDDVKMDVFRSGGAGGQNVNKVSTGVRLTHEPTGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
T ER+Q N+ A+ LK+KL + E++ +E + G+ ++ WG QIR+YV HPY+
Sbjct: 273 SSTVERTQYGNRDYAMRLLKSKLYQLELEKKEAERAALTGEKMENGWGSQIRSYVLHPYQ 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSM 299
+VKD RT +ET+ +V+DG+L+PFI +YL+++ S+
Sbjct: 333 MVKDHRTNYETNQPQAVLDGDLDPFINAYLQWQLSL 368
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
V + +E R + ++ L +E+A+ E + + FW++ +A++ ++ +K++ +
Sbjct: 10 VSDMQENIERFRGTLDMEALTEEIADYENRMTEPDFWNDNEKAKKVIEENNVLKNRRDSF 69
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
+ ++++ ++++ E D D L E + + K +D + L QLL+ PYD A
Sbjct: 70 LNLTNQVEELELLIEMAVE-DPEDEDTLGELEAGVANAQKDIDAYNLEQLLTEPYDANNA 128
Query: 131 VISITAGAGGTDA 143
++ I G+GGT++
Sbjct: 129 ILEIHPGSGGTES 141
>gi|47093711|ref|ZP_00231463.1| peptide chain release factor 2 [Listeria monocytogenes str. 4b
H7858]
gi|254992782|ref|ZP_05274972.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-064]
gi|386733193|ref|YP_006206689.1| peptide chain release factor 2 [Listeria monocytogenes 07PF0776]
gi|417316291|ref|ZP_12102941.1| peptide chain release factor 2 [Listeria monocytogenes J1816]
gi|47017905|gb|EAL08686.1| peptide chain release factor 2 [Listeria monocytogenes str. 4b
H7858]
gi|328465115|gb|EGF36383.1| peptide chain release factor 2 [Listeria monocytogenes J1816]
gi|384391951|gb|AFH81021.1| peptide chain release factor 2 [Listeria monocytogenes 07PF0776]
Length = 327
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +VMP L ++ +++++ EDL+I RA G GGQ++N ++AVR+THIP+G+ V
Sbjct: 174 HTSFVSVDVMPEL-DDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQL N+ +A+ LK KL +E++ E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 293 MVKDHRTNYETGNIQAVMDGDLDEFINAYLR 323
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
D +FW+++ AQ+ + K+ + + + ++L +E D L EE
Sbjct: 3 DPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE--EADEDLQEELE 60
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
IK + +FEL +LS PYDK A++ + GAGGT++Q
Sbjct: 61 KDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQ 102
>gi|253575894|ref|ZP_04853228.1| peptide chain release factor 2 [Paenibacillus sp. oral taxon 786
str. D14]
gi|251844688|gb|EES72702.1| peptide chain release factor 2 [Paenibacillus sp. oral taxon 786
str. D14]
Length = 342
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 105/151 (69%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +V+P + ++ ++++I EDL+I RA G GGQ++N ++AVRITHIPTG+ V
Sbjct: 186 HTSFVSCDVVPEISDD-VEIEIRNEDLKIDTYRASGAGGQHINTTDSAVRITHIPTGIVV 244
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A++ L++KL E++ E+ +IRG+ WG QIR+YVFHPY
Sbjct: 245 TCQNERSQIKNRERAMTMLRSKLYERKIEEQQRELDEIRGEQSDIAWGSQIRSYVFHPYS 304
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDG+L+ FI YL+
Sbjct: 305 MVKDHRTNVETGNVGAVMDGDLDAFIDGYLR 335
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 34 LAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDST 93
+A E K A FWD+ +AQ + + VK ++ T + + D+ + +L EE
Sbjct: 6 IANYEEKMAAPDFWDDNEKAQGIIAEMNAVKSSVDQYTALQNEYDELEMMAELAEE--EG 63
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D L E A +++L K L++FEL LL+ PYDK A++ + GAGGT++Q
Sbjct: 64 DESLAAEVADSVEKLVKKLEEFELQLLLNQPYDKMNAILELHPGAGGTESQ 114
>gi|417809962|ref|ZP_12456643.1| peptide chain release factor 2 [Lactobacillus salivarius GJ-24]
gi|335350886|gb|EGM52382.1| peptide chain release factor 2 [Lactobacillus salivarius GJ-24]
Length = 355
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 106/153 (69%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ VMP L ++S++V++ ED+++ RA G GGQ++NK +AVR+ HIPTG+ V
Sbjct: 197 HTSFASVNVMPEL-DDSVEVELRPEDIKMEVFRASGAGGQHINKTSSAVRLIHIPTGIVV 255
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQ N+ A + L+AKL + E++ + I+G+ + WG QIR+YVFHPY
Sbjct: 256 SSQAQRSQFQNRATAENMLRAKLYQLEMEEKEKQRAAIQGEQLDIGWGSQIRSYVFHPYS 315
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +ET +I +VMDG+L+PFI +YL++K
Sbjct: 316 MVKDHRTDYETGNIQAVMDGDLDPFINAYLQWK 348
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L LE+++AE E + A+ FWD++ +AQE + D+K K + + + D ++L
Sbjct: 9 LDALEEKIAENEARMAEQGFWDDQEKAQEVIAENNDLKAKFETFHELEESISDLGVSLEL 68
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+E+ D L + + K L ++L LLS YDK A++ I GAGGT++Q
Sbjct: 69 LQEI-PDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGGTESQ 125
>gi|229175857|ref|ZP_04303355.1| Peptide chain release factor 2 [Bacillus cereus MM3]
gi|423399991|ref|ZP_17377164.1| peptide chain release factor 2 [Bacillus cereus BAG2X1-2]
gi|423462035|ref|ZP_17438831.1| peptide chain release factor 2 [Bacillus cereus BAG5X2-1]
gi|423479316|ref|ZP_17456031.1| peptide chain release factor 2 [Bacillus cereus BAG6X1-1]
gi|228607590|gb|EEK64914.1| Peptide chain release factor 2 [Bacillus cereus MM3]
gi|401133890|gb|EJQ41513.1| peptide chain release factor 2 [Bacillus cereus BAG5X2-1]
gi|401656618|gb|EJS74133.1| peptide chain release factor 2 [Bacillus cereus BAG2X1-2]
gi|402425620|gb|EJV57766.1| peptide chain release factor 2 [Bacillus cereus BAG6X1-1]
Length = 325
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P +E ++++I EDL++ RA G GGQ++N ++AVRITH PT V
Sbjct: 173 HTSFVSCEVVPEFNDE-VEIEIRSEDLKVDTYRASGAGGQHINTTDSAVRITHTPTNTVV 231
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 232 TCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYS 291
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE++PFI +YL+
Sbjct: 292 LVKDHRTNTEVGNVQAVMDGEIDPFIDAYLR 322
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +K+ ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 3 AGFWDDQQGAQAVINEANALKE---MVGKFR-QLDETFENLEITHELLKEEYDEDLHEEL 58
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S +K L + ++++EL LLS PYDK A++ + GAGGT++Q
Sbjct: 59 ESEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQ 101
>gi|21282445|ref|NP_645533.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MW2]
gi|88194533|ref|YP_499328.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|161509023|ref|YP_001574682.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|21203882|dbj|BAB94581.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MW2]
gi|87202091|gb|ABD29901.1| peptide chain release factor 2, putative [Staphylococcus aureus
subsp. aureus NCTC 8325]
gi|160367832|gb|ABX28803.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
Length = 291
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 104/151 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH P+G+ V
Sbjct: 135 HTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVV 194
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 195 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYS 254
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 255 MVKDHRTNEETGKVDAVMDGDIGPFIESYLR 285
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 112 LDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+D++EL LL GP+D A++ + GAGGT++Q
Sbjct: 31 VDEYELQLLLDGPHDANNAILELHPGAGGTESQ 63
>gi|160944128|ref|ZP_02091358.1| hypothetical protein FAEPRAM212_01630 [Faecalibacterium prausnitzii
M21/2]
gi|158444804|gb|EDP21808.1| peptide chain release factor 2 [Faecalibacterium prausnitzii M21/2]
gi|295105045|emb|CBL02589.1| bacterial peptide chain release factor 2 (bRF-2) [Faecalibacterium
prausnitzii SL3/3]
Length = 373
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EVMP L + ++ V I ED+E+ R+ G GGQ++NK +AVR+ H PTG+ V
Sbjct: 214 QTSFASLEVMPEL-DNTIQVNIRPEDIEMQVYRSSGAGGQHINKTSSAVRLIHKPTGIVV 272
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C +RSQ N+ A+ LKAKL IA++Q +I I+G + WG QIR+YVF PY
Sbjct: 273 NCQTQRSQFQNRDYAMEMLKAKLYQIAKQQHMDKIDDIKGVQNEIAWGHQIRSYVFMPYT 332
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT +ET ++ +VMDG+++ FI +YLK
Sbjct: 333 MVKDHRTNYETGNVDAVMDGDIDEFIFAYLK 363
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 70/127 (55%), Gaps = 2/127 (1%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
V+++ + ++ K + ELE + F+D+ +++ + D+K K+N +
Sbjct: 18 VKDLEEALAIEASRKRVQELEHTMSRPGFYDDAELSKKVFDEVGDLKGKLNRFEKLQGLY 77
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
DDA T++++ +E D ++ EA + + KA+++ +L +L+G YD A+++ AG
Sbjct: 78 DDAETMLEMLDE--EYDPAMIPEAEEAVNTVGKAVEELQLMTMLNGEYDHSNAILTFHAG 135
Query: 138 AGGTDAQ 144
GGT+AQ
Sbjct: 136 TGGTEAQ 142
>gi|354585137|ref|ZP_09004027.1| peptide chain release factor 2 [Paenibacillus lactis 154]
gi|353189157|gb|EHB54669.1| peptide chain release factor 2 [Paenibacillus lactis 154]
Length = 331
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +V+P + ++ ++V+I EDL+I RA G GGQ++N ++AVRITHIPTGV V
Sbjct: 174 HTSFVSCDVVPEITDD-VEVEIRTEDLKIDTYRASGAGGQHINTTDSAVRITHIPTGVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A++ L++KL E++ E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQNERSQIKNRERAMTMLRSKLYERKIEEQQKELAEIRGEQSEIAWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDG+L+ FI YL+
Sbjct: 293 MVKDHRTQVETGNVGAVMDGDLDAFIDGYLR 323
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M A D FWD+ +AQ + + VK ++ + DDAV +++L +E D L
Sbjct: 1 MAAPD--FWDDNEKAQGIISEMNAVKSAVDSYQKLQQDYDDAVVMIELADE--EGDDSLA 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E IKEL ++ FEL LL+ PYDK A++ + GAGGT++Q
Sbjct: 57 GEIGDTIKELVGRVEAFELQLLLNQPYDKMNAILELHPGAGGTESQ 102
>gi|352517918|ref|YP_004887235.1| peptide chain release factor 2 [Tetragenococcus halophilus NBRC
12172]
gi|348602025|dbj|BAK95071.1| peptide chain release factor 2 [Tetragenococcus halophilus NBRC
12172]
Length = 330
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 106/151 (70%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EVMP + +ES+D++I ++L+I RA G GGQ++NK E+AVRITH+PTG
Sbjct: 174 HTSFCSIEVMPEM-DESIDIEINPDELKIDTYRASGAGGQHINKTESAVRITHLPTGTVA 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQ+ N+ +A++ LKAKL E++ E +RG+ ++ WG QIR+YVFHPY+
Sbjct: 233 ASQAQRSQIKNREQAMNMLKAKLYQQEREKQEQEQAALRGEQLEIGWGSQIRSYVFHPYQ 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT HET + +VMDG+++ FI +YLK
Sbjct: 293 MVKDHRTDHETGNTEAVMDGQIDEFIDAYLK 323
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD SFWD++ +AQ+ + K+ + ++DA ++++ +E D+ L E
Sbjct: 2 ADPSFWDDQEKAQKVINENNRKKETYDNFNHLAKGVEDAEVLLEMLQE--EADSDLAAEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
I +L K + +EL LL PYD+ A++ + GAGGT++Q
Sbjct: 60 DDKIVKLQKEMADYELALLLDEPYDRNNAIVELHPGAGGTESQ 102
>gi|417788605|ref|ZP_12436288.1| peptide chain release factor 2 [Lactobacillus salivarius NIAS840]
gi|334308782|gb|EGL99768.1| peptide chain release factor 2 [Lactobacillus salivarius NIAS840]
Length = 355
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 106/153 (69%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ VMP L ++S++V++ ED+++ RA G GGQ++NK +AVR+ HIPTG+ V
Sbjct: 197 HTSFASVNVMPEL-DDSVEVELRPEDIKMEVFRASGAGGQHINKTSSAVRLIHIPTGIVV 255
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQ N+ A + L+AKL + E++ + I+G+ + WG QIR+YVFHPY
Sbjct: 256 SSQAQRSQFQNRATAENMLRAKLYQLEMEEKEKQRAAIQGEQLDIGWGSQIRSYVFHPYS 315
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +ET +I +VMDG+L+PFI +YL++K
Sbjct: 316 MVKDHRTDYETGNIQAVMDGDLDPFINAYLQWK 348
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L LE+++AE E + A+ FWD++ +AQ+ + D+K K + + D ++L
Sbjct: 9 LDALEEKIAENEARMAEPGFWDDQEKAQKVIAENNDLKAKFETFHELAESISDLGVSLEL 68
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+E+ D L + + K L ++L LLS YDK A++ I GAGGT++Q
Sbjct: 69 LQEI-PDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGGTESQ 125
>gi|295707157|ref|YP_003600232.1| peptide chain release factor 2 [Bacillus megaterium DSM 319]
gi|294804816|gb|ADF41882.1| peptide chain release factor 2 [Bacillus megaterium DSM 319]
Length = 326
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 101/151 (66%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF ++MP +E + + I EDL++ RA G GGQ++N ++AVRITH+PT V V
Sbjct: 174 HTSFVSCDIMPEFNDE-ISIDIRTEDLKVDTYRASGAGGQHINTTDSAVRITHLPTNVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LK+KL + E++ ++ +IRG+ WG QIR+YVFHPY
Sbjct: 233 SCQTERSQIKNREQAMKMLKSKLYQLEIEKQQEQLAEIRGEQKDIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E + SVMDG+L+PFI +YL+
Sbjct: 293 LVKDHRTNTEVGNTQSVMDGDLDPFIDAYLR 323
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+D +FW+++ AQ + +KD +N ++ +L +E D L EE
Sbjct: 2 SDPNFWNDQQAAQTVINEANGLKDAVNQFNHLDETYENLQVSYELVKE--EYDEDLAEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S +KEL ++ FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 VSELKELISGMNDFELQLLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|385840722|ref|YP_005864046.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius
CECT 5713]
gi|300214843|gb|ADJ79259.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius
CECT 5713]
Length = 355
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 106/153 (69%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ VMP L ++S++V++ ED+++ RA G GGQ++NK +AVR+ HIPTG+ V
Sbjct: 197 HTSFASVNVMPEL-DDSVEVELRPEDIKMEVFRASGAGGQHINKTSSAVRLIHIPTGIVV 255
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQ N+ A + L+AKL + E++ + I+G+ + WG QIR+YVFHPY
Sbjct: 256 SSQAQRSQFQNRATAENMLRAKLYQLEMEEKEKQRAAIQGEQLDIGWGSQIRSYVFHPYS 315
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +ET +I +VMDG+L+PFI +YL++K
Sbjct: 316 MVKDHRTDYETGNIQAVMDGDLDPFINAYLQWK 348
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L LE+++AE E + A+ FWD++ +AQE + D+K K + + D ++L
Sbjct: 9 LDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISDLEVSLEL 68
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+E+ D L + + K L ++L LLS YDK A++ I GAGGT++Q
Sbjct: 69 LQEI-PDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGGTESQ 125
>gi|270307933|ref|YP_003329991.1| peptide chain release factor 2 [Dehalococcoides sp. VS]
gi|270153825|gb|ACZ61663.1| peptide chain release factor 2 [Dehalococcoides sp. VS]
Length = 357
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 104/151 (68%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ E+MP E+S+D+ I ED++I R+ G GGQNV KV TAVRITHIP+G+ V
Sbjct: 201 HTSFALVEIMPE-AEDSVDIDIKPEDIKIEMFRSSGPGGQNVQKVSTAVRITHIPSGIVV 259
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ N+ A+ L +KLL + +RA E +++G+ + AEWG QIR+YV HPYK
Sbjct: 260 ASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKLKGERISAEWGNQIRSYVLHPYK 319
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT +E + +V++GEL+ FI +YL+
Sbjct: 320 MVKDHRTDYEVGNAETVLEGELDGFINAYLR 350
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
E E+ ELE +A FW ++ AQ ++ L K L + +++D + L+ E
Sbjct: 20 ELEITELENASASPDFWQDQQNAQRVMKKLAANKRTSELWRGLERRVNDLTELAVLSYE- 78
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
D L E I L L+ E+ SG YD A++++ AGAGG ++Q
Sbjct: 79 ---DPSLSNEIEHEISGLTAELNSLEVGLAFSGQYDNRNALLTVHAGAGGVESQ 129
>gi|433602857|ref|YP_007035226.1| Peptide chain release factor 2 [Saccharothrix espanaensis DSM
44229]
gi|407880710|emb|CCH28353.1| Peptide chain release factor 2 [Saccharothrix espanaensis DSM
44229]
Length = 365
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 110/156 (70%), Gaps = 9/156 (5%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+G EV+P++ E++ V I E+DL + R+ G GGQ VN ++AVR+THIPTG+ V
Sbjct: 212 QTSFAGVEVVPVV-EQTDHVDIDEKDLRVDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVK---AEWGQQIRNYVFH 260
C ERSQL NK A++ L+AKLL E QR E Q R DA+K + WG Q+R+YV H
Sbjct: 271 SCQNERSQLQNKATAMAVLQAKLL---ERQRQEE--QARMDALKDSGSSWGNQMRSYVLH 325
Query: 261 PYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
PY++VKD+RT HE + +V+DGE++ F+++ ++++
Sbjct: 326 PYQMVKDLRTEHEVGNPSAVLDGEIDDFLEAGIRWR 361
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 2/138 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ D++ S + I A L L ++AELE AA WD++ +AQ L+ +
Sbjct: 4 DVEADIKDLSATLASIEAVMDLASLRAQVAELEEAAARPDLWDDQEQAQRVTSQLSHKQG 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ + + ++DD + +L E D D G L EA + ++L + E+ LLSG Y
Sbjct: 64 ELRRVVALRDRLDDLSVLYELAE--DEGDEGSLAEADTEHRKLRDEISSLEVRTLLSGEY 121
Query: 126 DKEGAVISITAGAGGTDA 143
D+ A+++I A AGG DA
Sbjct: 122 DERNALVTIRAEAGGIDA 139
>gi|372221284|ref|ZP_09499705.1| peptide chain release factor 2 [Mesoflavibacter zeaxanthinifaciens
S86]
Length = 328
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 104/150 (69%), Gaps = 1/150 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ V PL+ ++S++++I ++EI+ +R+ G GGQNVNKVET V++ H PTG+ +
Sbjct: 171 HTSFASVYVYPLV-DDSIEIEINPSEIEITTARSSGAGGQNVNKVETKVQLVHKPTGIQI 229
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C++ RSQ N+ AL LK++L I ++ +I +K EWG QIRNYV HPYK
Sbjct: 230 SCSDSRSQHDNRATALKMLKSQLYEIELRKKQEARAEIESSKMKIEWGSQIRNYVMHPYK 289
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 293
LVKDVRT ET ++ +VMDGE++ F+K+YL
Sbjct: 290 LVKDVRTSEETGNVDAVMDGEIDAFLKAYL 319
>gi|90962160|ref|YP_536076.1| peptide chain release factor 2 [Lactobacillus salivarius UCC118]
gi|301301257|ref|ZP_07207412.1| peptide chain release factor 2 [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|90821354|gb|ABD99993.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius
UCC118]
gi|300851133|gb|EFK78862.1| peptide chain release factor 2 [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 355
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 106/153 (69%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ VMP L ++S++V++ ED+++ RA G GGQ++NK +AVR+ HIPTG+ V
Sbjct: 197 HTSFASVNVMPEL-DDSVEVELRPEDIKMEVFRASGAGGQHINKTSSAVRLIHIPTGIVV 255
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQ N+ A + L+AKL + E++ + I+G+ + WG QIR+YVFHPY
Sbjct: 256 SSQAQRSQFQNRATAENMLRAKLYQLEMEEKEKQRAAIQGEQLDIGWGSQIRSYVFHPYS 315
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +ET +I +VMDG+L+PFI +YL++K
Sbjct: 316 MVKDHRTDYETGNIQAVMDGDLDPFINAYLQWK 348
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L LE+++AE E + A+ FWD++ +AQE + D+K K + + D ++L
Sbjct: 9 LDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISDLGVSLEL 68
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+E+ D L + + K L ++L LLS YDK A++ I GAGGT++Q
Sbjct: 69 LQEI-PDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGGTESQ 125
>gi|423451567|ref|ZP_17428420.1| peptide chain release factor 2 [Bacillus cereus BAG5X1-1]
gi|423471334|ref|ZP_17448078.1| peptide chain release factor 2 [Bacillus cereus BAG6O-2]
gi|423520979|ref|ZP_17497452.1| peptide chain release factor 2 [Bacillus cereus HuA4-10]
gi|423557296|ref|ZP_17533599.1| peptide chain release factor 2 [Bacillus cereus MC67]
gi|401145275|gb|EJQ52801.1| peptide chain release factor 2 [Bacillus cereus BAG5X1-1]
gi|401180076|gb|EJQ87239.1| peptide chain release factor 2 [Bacillus cereus HuA4-10]
gi|401193104|gb|EJR00111.1| peptide chain release factor 2 [Bacillus cereus MC67]
gi|402432814|gb|EJV64870.1| peptide chain release factor 2 [Bacillus cereus BAG6O-2]
Length = 326
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH+PT V
Sbjct: 174 HTSFVSCEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHLPTNTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKL E++ +++ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE+ PFI +YL+
Sbjct: 293 LVKDHRTNTEVGNVQAVMDGEINPFIDAYLR 323
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 58/103 (56%), Gaps = 6/103 (5%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD + ++D+ +++T ++ + D L EE
Sbjct: 4 AGFWDDQQGAQAVINEANALKDMVGRFR----QLDETFENLEMTHDLLKEEYDEDLHEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S +K L + ++++EL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 ESEVKTLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQ 102
>gi|294501808|ref|YP_003565508.1| peptide chain release factor 2 [Bacillus megaterium QM B1551]
gi|384044357|ref|YP_005492374.1| protein chain release factor B-like protein [Bacillus megaterium
WSH-002]
gi|294351745|gb|ADE72074.1| peptide chain release factor 2 [Bacillus megaterium QM B1551]
gi|345442048|gb|AEN87065.1| Protein chain release factor B-like protein [Bacillus megaterium
WSH-002]
Length = 326
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 101/151 (66%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF ++MP +E + + I EDL++ RA G GGQ++N ++AVRITH+PT V V
Sbjct: 174 HTSFVSCDIMPEFNDE-ISIDIRTEDLKVDTYRASGAGGQHINTTDSAVRITHLPTNVVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ +A+ LK+KL + E++ ++ +IRG+ WG QIR+YVFHPY
Sbjct: 233 SCQTERSQIKNREQAMKMLKSKLYQLEIEKQQEQLAEIRGEQKDIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E + SVMDG+L+PFI +YL+
Sbjct: 293 LVKDHRTNTEVGNTQSVMDGDLDPFIDAYLR 323
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD +FW+++ AQ + +KD +N ++ +L +E D L EE
Sbjct: 2 ADPNFWNDQQAAQTVINEANGLKDAVNQFNHLDETYENLQVSYELVKE--EYDEDLAEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S +KEL ++ FEL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 VSELKELISGMNDFELQLLLSEPYDKNNAILELHPGAGGTESQ 102
>gi|224475896|ref|YP_002633502.1| peptide chain release factor RF-2, major part [Staphylococcus
carnosus subsp. carnosus TM300]
gi|222420503|emb|CAL27317.1| peptide chain release factor RF-2, major part [Staphylococcus
carnosus subsp. carnosus TM300]
Length = 333
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 102/151 (67%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF +V+P +++++ +D+ + RA G GGQ++NK E+A+RITH PTG+ V
Sbjct: 175 HTSFVSCDVIPEFSNNEIEIEVNPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++ E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 235 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYS 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET ++ +VMDGE+ PFI++YL+
Sbjct: 295 MVKDHRTNEETGNVNAVMDGEIGPFIEAYLR 325
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 60/103 (58%), Gaps = 4/103 (3%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDD-AVTIVKLTEEMDSTDAGLLEEA 101
D +FWD++ +AQE + +K +N D + +++D + T L EE D LEE
Sbjct: 4 DPNFWDDQNKAQEIIDKNNALKHVVNGYRDLEAELEDMSATHELLAEEFDEDLKADLEEE 63
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
A+ K+ LDQFEL LL+GPYD A++ + GAGGT++Q
Sbjct: 64 ANAFKD---KLDQFELQLLLNGPYDANNAILELHPGAGGTESQ 103
>gi|416348669|ref|ZP_11680427.1| peptide chain release factor 2 [Clostridium botulinum C str.
Stockholm]
gi|338196741|gb|EGO88922.1| peptide chain release factor 2 [Clostridium botulinum C str.
Stockholm]
Length = 245
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 103/151 (68%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
QTSF+ EV+P L E S D++I +DL I RA G GGQ++NK ++AVRITHIPTG+ V
Sbjct: 92 QTSFASLEVLPELTE-SQDIEIKSDDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVV 150
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+ ERSQ NK A+S LK+KL+ + E +I+ + GD + WG QIR+YVF PY
Sbjct: 151 QSQSERSQFQNKDTAMSMLKSKLVELKERAHKEKIEDLSGDLKEIGWGSQIRSYVFQPYT 210
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT E +++ +VMDG+++ FI YLK
Sbjct: 211 MVKDHRTNTEMTNVDAVMDGDIDIFIVEYLK 241
>gi|418961684|ref|ZP_13513569.1| peptide chain release factor 2 [Lactobacillus salivarius SMXD51]
gi|380343779|gb|EIA32127.1| peptide chain release factor 2 [Lactobacillus salivarius SMXD51]
Length = 333
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 106/153 (69%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ VMP L ++S++V++ ED+++ RA G GGQ++NK +AVR+ HIPTG+ V
Sbjct: 175 HTSFASVNVMPEL-DDSVEVELRPEDIKMEVFRASGAGGQHINKTSSAVRLIHIPTGIVV 233
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+RSQ N+ A + L+AKL + E++ + I+G+ + WG QIR+YVFHPY
Sbjct: 234 SSQAQRSQFQNRATAENMLRAKLYQLEMEEKEKQRAAIQGEQLDIGWGSQIRSYVFHPYS 293
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKD RT +ET +I +VMDG+L+PFI +YL++K
Sbjct: 294 MVKDHRTDYETGNIQAVMDGDLDPFINAYLQWK 326
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FWD++ +AQ+ + D+K K + + D ++L +E+ D L +
Sbjct: 2 AEQGFWDDQEKAQKVIAENNDLKAKFETFHELAESISDLGVSLELLQEI-PDDEELQADL 60
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ K L ++L LLS YDK A++ I GAGGT++Q
Sbjct: 61 EENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGGTESQ 103
>gi|309809397|ref|ZP_07703259.1| peptide chain release factor 2 [Lactobacillus iners SPIN 2503V10-D]
gi|312870788|ref|ZP_07730894.1| peptide chain release factor 2 [Lactobacillus iners LEAF 3008A-a]
gi|312873174|ref|ZP_07733233.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2062A-h1]
gi|315653886|ref|ZP_07906802.1| peptide chain release factor RF2 [Lactobacillus iners ATCC 55195]
gi|308170308|gb|EFO72339.1| peptide chain release factor 2 [Lactobacillus iners SPIN 2503V10-D]
gi|311091407|gb|EFQ49792.1| peptide chain release factor 2 [Lactobacillus iners LEAF 2062A-h1]
gi|311093664|gb|EFQ52002.1| peptide chain release factor 2 [Lactobacillus iners LEAF 3008A-a]
gi|315488582|gb|EFU78228.1| peptide chain release factor RF2 [Lactobacillus iners ATCC 55195]
Length = 359
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 164/292 (56%), Gaps = 15/292 (5%)
Query: 10 DVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL--TDVKDKI 67
++E +D + EI +A +++L+ E + E+ S +D+ E T+ D
Sbjct: 75 NMEPENDMLMEI--TAEVEKLKNEFNDYELHLLLSGKYDDHNALLEIHSGAGGTEAMDWA 132
Query: 68 NLLTDFKTKMDDAVTIVKLTEEMDSTD-AGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
N+L + D+ + ++ D AGL ++ S+ + N A F L + +G +
Sbjct: 133 NMLFRMYQRWCDSHNLTFEVDDFQVGDEAGL--KSVSVRVQGNNA---FGLLKSENGVH- 186
Query: 127 KEGAVISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVN 186
++ I+ TSF+ EV+P + ++S++++I +DL I R+ G GGQ++N
Sbjct: 187 ---RLVRISPFDSAKRRHTSFASVEVIPEI-DKSINIEINPDDLRIDVYRSSGAGGQHIN 242
Query: 187 KVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAV 246
K +AVRITH+PTG+ +RSQ N+ A+ L+AKL + E+++ + + ++G+
Sbjct: 243 KTSSAVRITHLPTGIVTSSQAQRSQFQNRETAMDMLRAKLFKLEEDKKRKQTEALKGNQK 302
Query: 247 KAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 298
+ +G QIR+YVFHPY +VKD RT +ETSD + VM+G L+PFI +YL++ S
Sbjct: 303 EINFGSQIRSYVFHPYNMVKDHRTDYETSDTIGVMNGNLDPFIYAYLQWMLS 354
>gi|219849743|ref|YP_002464176.1| hypothetical protein Cagg_2879 [Chloroflexus aggregans DSM 9485]
gi|254790911|sp|B8G607.1|RF2_CHLAD RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|219544002|gb|ACL25740.1| hypothetical protein Cagg_2879 [Chloroflexus aggregans DSM 9485]
Length = 367
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/286 (34%), Positives = 166/286 (58%), Gaps = 37/286 (12%)
Query: 24 SAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL---TDVKDKINLLTDFKTKMDD- 79
+A L+ +++E+A+ E++ S +D+R +A ++QA TD +D +L T+ +
Sbjct: 98 AAELRAVQREVAQRELEILLSGPYDDR-DAFLSIQAGMGGTDAQDWAAMLLRMYTRWAER 156
Query: 80 ---AVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA------ 130
V ++ L+E +AG+ ++A+I + GPY A
Sbjct: 157 RGYTVNLIDLSE---GEEAGI--KSATI---------------EIRGPYAYGYARAEAGV 196
Query: 131 --VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 188
+I ++ QTSF+ EVMP + +++ +V+I EDL I R+GG GGQ VN
Sbjct: 197 HRLIRLSPFNAAHTRQTSFARVEVMPEV-DDAPEVEIKPEDLRIDVFRSGGHGGQGVNTT 255
Query: 189 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 248
++AVRITH+PTG+ V C ERSQ+ N+ AL L+A+LL +++A E ++RG+ +A
Sbjct: 256 DSAVRITHLPTGIVVTCQNERSQIQNRETALRVLRARLLERELQRQAEERARLRGEYREA 315
Query: 249 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+G Q+R Y HP LVKD RT +ETS++ +V+DGE++PFI+++L+
Sbjct: 316 AFGNQMRTYYLHPSTLVKDHRTDYETSNVQAVLDGEIDPFIEAFLR 361
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 2/138 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L +++E +R +R L + E+ +LE++A+D W+ AQE +Q LT +K++
Sbjct: 5 LHEELETIRERFANLRGHLDLAAKQAEIEQLEVRASDPELWNTPRVAQELMQRLTRLKEE 64
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ L D +M +++L E+ D L + A+ ++ + + + Q EL LLSGPYD
Sbjct: 65 VALWNDLDHRMTSLAELIELAEQ--EGDESLAADLAAELRAVQREVAQRELEILLSGPYD 122
Query: 127 KEGAVISITAGAGGTDAQ 144
A +SI AG GGTDAQ
Sbjct: 123 DRDAFLSIQAGMGGTDAQ 140
>gi|420199740|ref|ZP_14705411.1| peptide chain release factor 2 [Staphylococcus epidermidis
NIHLM031]
gi|394271490|gb|EJE15983.1| peptide chain release factor 2 [Staphylococcus epidermidis
NIHLM031]
Length = 333
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 102/151 (67%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH PTG+ V
Sbjct: 175 HTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++ E+ +IRG+ WG QIR+YVFHPY
Sbjct: 235 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQEQEMAEIRGEQKDIGWGSQIRSYVFHPYS 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET + +VMDGE+ PFI++YL+
Sbjct: 295 MVKDHRTNEETGKVDAVMDGEIGPFIEAYLR 325
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
D FW+++ +AQ+ + +K +N +DD +L +E D + +E
Sbjct: 4 DPDFWNDQTKAQDIIDKNNALKSIVNGYYQLTNAVDDMSATRELLQE--EYDDDMKKELE 61
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+++ + +DQ+EL LL GP+D A++ + GAGGT++Q
Sbjct: 62 EEVQQFEEQIDQYELQLLLDGPHDANNAILELHPGAGGTESQ 103
>gi|163942871|ref|YP_001647755.1| peptide chain release factor 2 [Bacillus weihenstephanensis KBAB4]
gi|229014346|ref|ZP_04171465.1| Peptide chain release factor 2 [Bacillus mycoides DSM 2048]
gi|229063835|ref|ZP_04200139.1| Peptide chain release factor 2 [Bacillus cereus AH603]
gi|229135993|ref|ZP_04264753.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST196]
gi|229169892|ref|ZP_04297588.1| Peptide chain release factor 2 [Bacillus cereus AH621]
gi|423369152|ref|ZP_17346583.1| peptide chain release factor 2 [Bacillus cereus VD142]
gi|423490324|ref|ZP_17467006.1| peptide chain release factor 2 [Bacillus cereus BtB2-4]
gi|423496048|ref|ZP_17472692.1| peptide chain release factor 2 [Bacillus cereus CER057]
gi|423497158|ref|ZP_17473775.1| peptide chain release factor 2 [Bacillus cereus CER074]
gi|423513371|ref|ZP_17489901.1| peptide chain release factor 2 [Bacillus cereus HuA2-1]
gi|423595633|ref|ZP_17571663.1| peptide chain release factor 2 [Bacillus cereus VD048]
gi|423597567|ref|ZP_17573567.1| peptide chain release factor 2 [Bacillus cereus VD078]
gi|423660014|ref|ZP_17635183.1| peptide chain release factor 2 [Bacillus cereus VDM022]
gi|423670701|ref|ZP_17645730.1| peptide chain release factor 2 [Bacillus cereus VDM034]
gi|423673072|ref|ZP_17648011.1| peptide chain release factor 2 [Bacillus cereus VDM062]
gi|163865068|gb|ABY46127.1| peptide chain release factor 2 [Bacillus weihenstephanensis KBAB4]
gi|228613606|gb|EEK70735.1| Peptide chain release factor 2 [Bacillus cereus AH621]
gi|228647451|gb|EEL03526.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST196]
gi|228716472|gb|EEL68176.1| Peptide chain release factor 2 [Bacillus cereus AH603]
gi|228746946|gb|EEL96830.1| Peptide chain release factor 2 [Bacillus mycoides DSM 2048]
gi|401078282|gb|EJP86597.1| peptide chain release factor 2 [Bacillus cereus VD142]
gi|401149884|gb|EJQ57351.1| peptide chain release factor 2 [Bacillus cereus CER057]
gi|401162878|gb|EJQ70231.1| peptide chain release factor 2 [Bacillus cereus CER074]
gi|401221527|gb|EJR28141.1| peptide chain release factor 2 [Bacillus cereus VD048]
gi|401239099|gb|EJR45531.1| peptide chain release factor 2 [Bacillus cereus VD078]
gi|401294988|gb|EJS00613.1| peptide chain release factor 2 [Bacillus cereus VDM034]
gi|401303675|gb|EJS09236.1| peptide chain release factor 2 [Bacillus cereus VDM022]
gi|401311172|gb|EJS16480.1| peptide chain release factor 2 [Bacillus cereus VDM062]
gi|402430003|gb|EJV62085.1| peptide chain release factor 2 [Bacillus cereus BtB2-4]
gi|402445615|gb|EJV77484.1| peptide chain release factor 2 [Bacillus cereus HuA2-1]
Length = 326
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH+PT V
Sbjct: 174 HTSFVSCEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHLPTNTVV 232
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKL E++ +++ +IRG+ + WG QIR+YVFHPY
Sbjct: 233 TCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYS 292
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE+ PFI +YL+
Sbjct: 293 LVKDHRTNTEVGNVQAVMDGEINPFIDAYLR 323
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 58/103 (56%), Gaps = 6/103 (5%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD + ++D+ +++T ++ + D L EE
Sbjct: 4 AGFWDDQQGAQAVINEANALKDMVGRFR----QLDETFENLEMTHDLLKEEYDEDLHEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S +K L + ++++EL LLS PYDK A++ + GAGGT++Q
Sbjct: 60 ESEVKTLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQ 102
>gi|357058420|ref|ZP_09119274.1| peptide chain release factor 2 [Selenomonas infelix ATCC 43532]
gi|355374273|gb|EHG21574.1| peptide chain release factor 2 [Selenomonas infelix ATCC 43532]
Length = 368
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSFS +VMP + +++++V I +D+ + + RA G GGQ++NK +AVR+TH PTG+ V
Sbjct: 212 HTSFSACDVMPEI-DDAVEVPINMDDVRVDYFRASGAGGQHINKTSSAVRMTHEPTGIVV 270
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
+C ERSQL NK + L L+AKL + +E++ EI ++ G K EWG QIR+YVF PY
Sbjct: 271 QCQNERSQLQNKEQCLKMLRAKLFELEQEKKEEEIAKLEGVQQKIEWGSQIRSYVFQPYT 330
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 296
+VKDVRT ET ++ +VMDG+++PFI++YL K
Sbjct: 331 MVKDVRTNAETGNVQAVMDGDIDPFIRAYLNAK 363
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 75/131 (57%), Gaps = 4/131 (3%)
Query: 15 SDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFK 74
++++++R S + E+++AELE K ++ SFWD+ AQ+ Q L +K ++ D
Sbjct: 13 GEKLDQMRISLEIPAKEEKIAELEYKMSEPSFWDDAVAAQKLNQELAALKGGVDTYRDLM 72
Query: 75 TKMDDAVTIVKL-TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVIS 133
K +DA T+ ++ EE D + G + +I E L+ L LLSG YD A+++
Sbjct: 73 AKYEDAETLYEMGIEESDPSMEGDIRAELDLIAE---GLETLRLEVLLSGEYDANDAILT 129
Query: 134 ITAGAGGTDAQ 144
+ AGAGGT+AQ
Sbjct: 130 LHAGAGGTEAQ 140
>gi|228474266|ref|ZP_04059001.1| peptide chain release factor 2 [Staphylococcus hominis SK119]
gi|314936947|ref|ZP_07844294.1| peptide chain release factor 2 [Staphylococcus hominis subsp.
hominis C80]
gi|228271625|gb|EEK12972.1| peptide chain release factor 2 [Staphylococcus hominis SK119]
gi|313655566|gb|EFS19311.1| peptide chain release factor 2 [Staphylococcus hominis subsp.
hominis C80]
Length = 332
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 104/151 (68%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH PTG+ V
Sbjct: 175 HTSFASCDVIPEFDNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVV 234
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
ERSQ+ N+ A+ LK+KL + E++ E+ +IRG+ + WG QIR+YVFHPY
Sbjct: 235 NNQNERSQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYS 294
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
+VKD RT ET+ + +VMDG++ PFI++YL+
Sbjct: 295 MVKDHRTNEETAKVDAVMDGDIAPFIEAYLR 325
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWDN+ +AQ+ + +K +N + K++D +L +E D + E+ I
Sbjct: 7 FWDNQNKAQDVIDKNNALKSIVNGYYELNHKLEDMDATWELLQE--EYDDEIKEDLEQDI 64
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+ +DQFEL LL GP+D A++ + GAGGT++Q
Sbjct: 65 VSFREQIDQFELQLLLDGPHDANNAILELHPGAGGTESQ 103
>gi|218282777|ref|ZP_03488959.1| hypothetical protein EUBIFOR_01545 [Eubacterium biforme DSM 3989]
gi|218216361|gb|EEC89899.1| hypothetical protein EUBIFOR_01545 [Eubacterium biforme DSM 3989]
Length = 346
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 106/164 (64%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ G TSF+ +VMP +E +++ I EDL + RA G GGQ++NK ++
Sbjct: 180 LVRISPFDSGARRHTSFASLDVMPQFNDE-IEIDIKPEDLIVETKRASGAGGQHINKTDS 238
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVR+ H PTG+ C RSQ N+ + L LK++L + E++ +I QI+G EW
Sbjct: 239 AVRMVHKPTGIVATCQNGRSQHENREECLRVLKSRLYQLEIEEQEKKIAQIKGVQSANEW 298
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIR+YV HPY LVKDVRTG+ETS + SV+DG+L+ FI +YLK
Sbjct: 299 GSQIRSYVMHPYSLVKDVRTGYETSQVQSVLDGDLDEFIFAYLK 342
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 32 KELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMD 91
K++ + + + + FW ++ +AQ+ ++A +KD ++ + +++ L + D
Sbjct: 11 KQIEDYDKQTLEPDFWQDQKKAQQVIRAKNALKDIVDRYEELDLQLN------SLNDTAD 64
Query: 92 STDAGLLEEAASIIKE----LNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+ EE I +E ++K + FE+ LLS YD+ A++ I GAGGT++
Sbjct: 65 ELKSEFDEELMMIAEEEYMDMDKKFENFEIQVLLSHEYDQNNAILEIHPGAGGTES 120
>gi|423519840|ref|ZP_17496321.1| peptide chain release factor 2 [Bacillus cereus HuA2-4]
gi|401157419|gb|EJQ64817.1| peptide chain release factor 2 [Bacillus cereus HuA2-4]
Length = 325
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 144 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 203
TSF EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH+PT V
Sbjct: 173 HTSFVSCEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHLPTNTVV 231
Query: 204 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 263
C ERSQ+ N+ A+ LKAKL E++ +++ +IRG+ + WG QIR+YVFHPY
Sbjct: 232 TCQSERSQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYS 291
Query: 264 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
LVKD RT E ++ +VMDGE+ PFI +YL+
Sbjct: 292 LVKDHRTNTEVGNVQAVMDGEINPFIDAYLR 322
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 58/103 (56%), Gaps = 6/103 (5%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD + ++D+ +++T ++ + D L EE
Sbjct: 3 AGFWDDQQGAQAVINEANALKDMVGRFR----QLDETFENLEMTHDLLKEEYDEDLHEEL 58
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
S +K L + ++++EL LLS PYDK A++ + GAGGT++Q
Sbjct: 59 ESEVKTLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQ 101
>gi|293400349|ref|ZP_06644495.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291306749|gb|EFE47992.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 346
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 108/164 (65%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ G TSF+ +VMP +E ++++I EDL + RA G GGQ++NK ++
Sbjct: 180 LVRISPFDAGGRRHTSFASLDVMPQFNDE-IEIEIKPEDLIVETKRASGAGGQHINKTDS 238
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVR+ H PTG+ C RSQ N+ +AL LK++L E++ +++ +I+G+ EW
Sbjct: 239 AVRMVHKPTGLVATCQNGRSQHENREEALRVLKSRLYQKMIEEQEAKLAEIKGEVKANEW 298
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIR+YVFHPY +VKD RT HETSD+ VMDG+L+ FI +YLK
Sbjct: 299 GSQIRSYVFHPYSMVKDHRTNHETSDVQGVMDGDLDGFIFAYLK 342
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 33 ELAELEMKAADSSFWDNRAEAQ---ETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
++ EL K + SFW++ +AQ L A+ DV D + L +D+ ++K
Sbjct: 12 KIQELTAKTLEESFWNDPQKAQVVIRQLNAIKDVVDSYDALQKALNSLDETQELLK---- 67
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+ D + E +E+ K FE+ LLS YD A++ + GAGGT++
Sbjct: 68 -EDFDEEIFELFELEYQEMEKNFADFEIKVLLSHEYDHSSAILELHPGAGGTES 120
>gi|373453408|ref|ZP_09545302.1| peptide chain release factor 2 [Eubacterium sp. 3_1_31]
gi|371963780|gb|EHO81326.1| peptide chain release factor 2 [Eubacterium sp. 3_1_31]
Length = 346
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 108/164 (65%), Gaps = 1/164 (0%)
Query: 131 VISITAGAGGTDAQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 190
++ I+ G TSF+ +VMP +E ++++I EDL + RA G GGQ++NK ++
Sbjct: 180 LVRISPFDAGGRRHTSFASLDVMPQFNDE-IEIEIKPEDLIVETKRASGAGGQHINKTDS 238
Query: 191 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 250
AVR+ H PTG+ C RSQ N+ +AL LK++L E++ +++ +I+G+ EW
Sbjct: 239 AVRMVHKPTGLVATCQNGRSQHENREEALRVLKSRLYQKMIEEQEAKLAEIKGEVKANEW 298
Query: 251 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 294
G QIR+YVFHPY +VKD RT HETSD+ VMDG+L+ FI +YLK
Sbjct: 299 GSQIRSYVFHPYSMVKDHRTNHETSDVQGVMDGDLDGFIFAYLK 342
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 33 ELAELEMKAADSSFWDNRAEAQ---ETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
++ EL K + SFW++ +AQ L A+ DV D + L + +D+ ++K
Sbjct: 12 KIQELTAKTLEESFWNDPQKAQVVIRQLNAIKDVVDSYDALQKALSSLDETQELLK---- 67
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+ D + E +E+ K FE+ LLS YD A++ + GAGGT++
Sbjct: 68 -EDFDEEIFELFELEYQEMEKNFADFEIKVLLSHEYDHSSAILELHPGAGGTES 120
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.128 0.341
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,258,967,586
Number of Sequences: 23463169
Number of extensions: 166567885
Number of successful extensions: 572278
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9036
Number of HSP's successfully gapped in prelim test: 672
Number of HSP's that attempted gapping in prelim test: 550636
Number of HSP's gapped (non-prelim): 15628
length of query: 307
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 165
effective length of database: 9,027,425,369
effective search space: 1489525185885
effective search space used: 1489525185885
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 76 (33.9 bits)