Query 021845
Match_columns 306
No_of_seqs 272 out of 1965
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 10:10:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021845.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021845hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wfi_A Peptidyl-prolyl CIS-tra 100.0 8.8E-51 3E-55 355.4 20.6 163 63-289 7-179 (179)
2 2r99_A Peptidyl-prolyl CIS-tra 100.0 1.2E-50 4.1E-55 352.7 20.6 165 61-290 7-173 (173)
3 1a58_A Cyclophilin; isomerase, 100.0 1.4E-50 4.6E-55 353.7 20.7 163 64-290 5-177 (177)
4 3ich_A Peptidyl-prolyl CIS-tra 100.0 5.8E-51 2E-55 358.9 18.0 170 58-291 8-179 (188)
5 1qng_A Peptidyl-prolyl CIS-tra 100.0 1.3E-50 4.3E-55 351.7 19.8 161 64-289 2-170 (170)
6 1mzw_A Cyclophilin H, U-snRNP- 100.0 1.5E-50 5.1E-55 353.4 19.6 162 63-289 8-177 (177)
7 2he9_A NK-tumor recognition pr 100.0 2.1E-50 7.1E-55 356.4 20.5 165 63-291 17-191 (192)
8 2haq_A Cyclophilin; rotamase, 100.0 1.5E-50 5.3E-55 351.5 19.2 163 61-289 7-172 (172)
9 2z6w_A Peptidyl-prolyl CIS-tra 100.0 2.5E-50 8.7E-55 348.2 20.2 160 65-290 3-165 (165)
10 2cmt_A Peptidyl-prolyl CIS-tra 100.0 2.4E-50 8.4E-55 350.4 20.0 164 62-290 7-172 (172)
11 2igv_A Peptidyl-prolyl CIS-tra 100.0 2.4E-50 8.1E-55 350.9 20.0 162 64-290 2-172 (173)
12 3pmp_A Cyclophilin A; peptidyl 100.0 3.5E-50 1.2E-54 347.1 20.1 160 65-290 2-164 (164)
13 4fru_A Cyclophilin B, peptidyl 100.0 2.2E-50 7.5E-55 354.7 17.1 168 60-291 7-176 (185)
14 3rdd_A Peptidyl-prolyl CIS-tra 100.0 6.6E-50 2.2E-54 351.2 19.7 166 60-290 17-184 (184)
15 2poy_A Peptidyl-prolyl CIS-tra 100.0 2.3E-49 7.7E-54 348.2 19.4 162 62-288 16-186 (186)
16 3k2c_A Peptidyl-prolyl CIS-tra 100.0 9.7E-49 3.3E-53 346.1 21.6 163 63-290 25-191 (193)
17 1z81_A Cyclophilin; structural 100.0 1.7E-48 5.7E-53 352.0 18.3 163 64-289 58-229 (229)
18 2c3b_A Ppiase, cyclophilin; is 100.0 1.1E-48 3.6E-53 340.2 14.0 167 64-289 2-172 (172)
19 2ose_A Probable peptidyl-proly 100.0 4E-48 1.4E-52 351.2 17.2 174 60-292 9-209 (234)
20 2ok3_A Peptidyl-prolyl CIS-tra 100.0 2.4E-47 8.1E-52 328.5 17.8 153 91-292 5-158 (161)
21 2poe_A Cyclophilin-like protei 100.0 1.8E-47 6.1E-52 335.9 16.9 155 92-292 22-177 (185)
22 2fu0_A Cyclophilin, putative; 100.0 5.5E-47 1.9E-51 325.8 15.9 151 89-289 8-159 (160)
23 2x7k_A Peptidyl-prolyl CIS-tra 100.0 8.3E-47 2.8E-51 326.5 15.8 147 93-289 18-165 (166)
24 1zkc_A Peptidyl-prolyl CIS-tra 100.0 1.3E-46 4.3E-51 333.0 16.7 151 92-292 25-177 (197)
25 3bo7_A Peptidyl-prolyl CIS-tra 100.0 1.6E-46 5.5E-51 334.0 16.6 161 91-294 11-177 (201)
26 2b71_A Cyclophilin-like protei 100.0 1.5E-46 5.1E-51 332.5 15.7 150 92-291 44-194 (196)
27 2a2n_A Peptidylprolyl isomeras 100.0 6.4E-46 2.2E-50 323.7 16.9 148 92-288 27-175 (176)
28 1ihg_A Cyclophilin 40; ppiase 100.0 1.9E-45 6.5E-50 352.4 20.5 163 65-292 15-187 (370)
29 2k7n_A Peptidyl-prolyl CIS-tra 100.0 2.5E-45 8.4E-50 326.0 18.5 150 93-292 18-168 (203)
30 1w74_A Peptidyl-prolyl CIS-tra 100.0 1.2E-45 4E-50 325.7 15.7 146 92-289 29-191 (191)
31 2hq6_A Serologically defined c 100.0 2.7E-45 9.1E-50 322.0 15.8 148 94-292 32-182 (185)
32 1lop_A Cyclophilin A; rotamase 100.0 2.2E-44 7.4E-49 310.9 12.1 152 91-290 4-164 (164)
33 1v9t_A Cyclophilin B; beta bar 100.0 8.7E-44 3E-48 307.7 15.7 151 93-290 11-166 (166)
34 3bkp_A Cyclophilin; malaria, i 100.0 7.2E-44 2.5E-48 322.8 15.7 163 93-294 28-197 (232)
35 3s6m_A Peptidyl-prolyl CIS-tra 100.0 1.9E-43 6.5E-48 305.8 13.8 151 91-289 8-167 (167)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 3E-37 1E-41 295.0 11.3 137 93-242 185-344 (369)
37 3kop_A Uncharacterized protein 90.5 3.1 0.00011 35.6 11.1 37 95-135 31-68 (188)
38 2nnz_A Hypothetical protein; b 31.5 42 0.0014 27.6 3.8 23 96-118 39-61 (153)
No 1
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=8.8e-51 Score=355.37 Aligned_cols=163 Identities=28% Similarity=0.531 Sum_probs=150.1
Q ss_pred CCCceEEEEEEeCCccCCCCCCCCCcCCCCccceeEEEEecCCCCchHHHHHHHHhcc----------CccccCceeEee
Q 021845 63 TITDSIFMDFSLCPTFFRPEGTDPTLCSSPVPLGRLIIGLYGHLAPITVSNFKAMCSS----------RSLYRNTLVHKI 132 (306)
Q Consensus 63 ~~~~~v~~di~i~~~~~~~~~~~~~~~~~~t~~GrIvIeL~~d~aP~tv~NF~~L~~~----------~~~Y~gt~FhRV 132 (306)
..+++|||||++ ++|++|+|+||||.+.||+||+||++||++ .++|+|+.||||
T Consensus 7 ~~~~~vf~di~i----------------~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRv 70 (179)
T 2wfi_A 7 VQRPRCFFDIAI----------------NNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRV 70 (179)
T ss_dssp -CCCEEEEEEEE----------------TTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEE
T ss_pred CCCCeEEEEEEE----------------CCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEE
Confidence 358899999999 899999999999999999999999999972 268999999999
Q ss_pred cCCeEEEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCCCCcccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEc
Q 021845 133 FPGQFFLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLRPNAFLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITT 212 (306)
Q Consensus 133 i~~f~iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~de~~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl 212 (306)
+++||||+||+ ..+++.+|.+++ +..|+||++.++|+++|+|||||. +||+|+||||||+
T Consensus 71 i~~f~iQgGd~--~~~~g~gg~si~--------g~~f~dE~~~~~h~~~G~lsMAn~----------gp~tngSQFfIt~ 130 (179)
T 2wfi_A 71 VKDFMVQGGDF--SEGNGRGGESIY--------GGFFEDESFAVKHNKEFLLSMANR----------GKDTNGSQFFITT 130 (179)
T ss_dssp ETTTEEEECCT--TTSSSSCCCCTT--------SSCBCCCCCCSCCCSTTEEEECCS----------STTCBCSCEEEES
T ss_pred ECCCEEEcccc--cCCCCCCCCccc--------CCcccccccCcCcCCCeEEEEEeC----------CCCCcceEEEEEc
Confidence 99999999997 457788888876 466899999999999999999998 7999999999999
Q ss_pred CCCCCCCCCCCCcEEEEEEcCHHHHHHHHcCCCCCCchhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEe
Q 021845 213 GPGPCPQLDNKNIVFGTVLQGLDVVAAIASIPTYKPSERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGEL 289 (306)
Q Consensus 213 ~~~~~p~LDg~~tVFGrVv~GmdVl~kI~~~~t~~~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l 289 (306)
.+ ++|||++|+|||||++|||||++|++++++. +++|.++|+|.+||+|
T Consensus 131 ~~--~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~--------------------------~~~P~~~v~I~~~G~l 179 (179)
T 2wfi_A 131 KP--TPHLDGHHVVFGQVISGQEVVREIENQKTDA--------------------------ASKPFAEVRILSCGEL 179 (179)
T ss_dssp SC--CGGGTTTSCEEEEEEECHHHHHHHHTCCBCT--------------------------TSCBSSCEEEEEEEEC
T ss_pred CC--CcccCCCeeEEEEEeCCHHHHHHHHcCCCCC--------------------------CCCCCCCeEEEeCeeC
Confidence 98 9999999999999999999999999999874 5899999999999986
No 2
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=1.2e-50 Score=352.74 Aligned_cols=165 Identities=27% Similarity=0.543 Sum_probs=149.0
Q ss_pred CCCCCceEEEEEEeCCccCCCCCCCCCcCCCCccceeEEEEecCCCCchHHHHHHHHhcc-Ccc-ccCceeEeecCCeEE
Q 021845 61 DTTITDSIFMDFSLCPTFFRPEGTDPTLCSSPVPLGRLIIGLYGHLAPITVSNFKAMCSS-RSL-YRNTLVHKIFPGQFF 138 (306)
Q Consensus 61 ~~~~~~~v~~di~i~~~~~~~~~~~~~~~~~~t~~GrIvIeL~~d~aP~tv~NF~~L~~~-~~~-Y~gt~FhRVi~~f~i 138 (306)
....+++||||+++ ++|++|+|+||||.+.||+||+||++||++ .++ |+|+.||||+++|||
T Consensus 7 ~~~~~~~v~~di~i----------------~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~i 70 (173)
T 2r99_A 7 KARSNPQVYMDIKI----------------GNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMC 70 (173)
T ss_dssp ---CCCEEEEEEEE----------------TTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEE
T ss_pred cccCCCEEEEEEEE----------------CCccceeEEEEECCCCCcHHHHHHHHHhcccCCceecCCEEEEeeCCCEE
Confidence 34568999999999 789999999999999999999999999962 255 999999999999999
Q ss_pred EcCCCCCcCCCCCCCccCCCCCCCCCCCCCCCCCcccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCCCCC
Q 021845 139 LAGRQGLSRRDSKLGELHPPLDFLPPNTDTLRPNAFLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPGPCP 218 (306)
Q Consensus 139 q~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~de~~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~~~p 218 (306)
||||+ ..++|.+|.+++ +..|+||++.++|+++|+|||||. +||+++||||||+.+ .+
T Consensus 71 QgGd~--~~~~g~gg~si~--------g~~f~dE~~~l~h~~~G~lsmA~~----------gp~t~gSQFfIt~~~--~~ 128 (173)
T 2r99_A 71 QGGDF--TNHNGTGGKSIY--------GKKFDDENFILKHTGPGLLSMANS----------GPNTNGSQFFLTCDK--TD 128 (173)
T ss_dssp EECCT--TTSSSSCCCBTT--------BSCBCCCCCCSCCCSSSEEEECCS----------STTCBCSCEEEESSC--CG
T ss_pred EeCCc--CCCCCCCCCccC--------CCcccCcccCcccCCCcEEEEccC----------CCCCcccEEEEECCC--CC
Confidence 99997 456788888876 456889999999999999999998 799999999999998 99
Q ss_pred CCCCCCcEEEEEEcCHHHHHHHHcCCCCCCchhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEec
Q 021845 219 QLDNKNIVFGTVLQGLDVVAAIASIPTYKPSERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGELK 290 (306)
Q Consensus 219 ~LDg~~tVFGrVv~GmdVl~kI~~~~t~~~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l~ 290 (306)
|||++|+|||||++|||||++|++++++ .++|.++|+|.+||+|+
T Consensus 129 ~LDg~~tVFG~Vv~G~dvv~~I~~~~~~---------------------------~~~P~~~v~I~~cG~l~ 173 (173)
T 2r99_A 129 WLDGKHVVFGEVTEGLDVLRQIEAQGSK---------------------------DGKPKQKVIIADCGEYV 173 (173)
T ss_dssp GGTTTSCEEEEEEECHHHHHHHHTTCCT---------------------------TCCCSSCEEEEEEEECC
T ss_pred ccCCCeeEEEEEEcCHHHHHHHHhCCCC---------------------------CCCCCCCeEEEEeeeEC
Confidence 9999999999999999999999999875 38999999999999984
No 3
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=1.4e-50 Score=353.65 Aligned_cols=163 Identities=32% Similarity=0.571 Sum_probs=150.3
Q ss_pred CCceEEEEEEeCCccCCCCCCCCCcCCCCccceeEEEEecCCCCchHHHHHHHHhcc--------Cc--cccCceeEeec
Q 021845 64 ITDSIFMDFSLCPTFFRPEGTDPTLCSSPVPLGRLIIGLYGHLAPITVSNFKAMCSS--------RS--LYRNTLVHKIF 133 (306)
Q Consensus 64 ~~~~v~~di~i~~~~~~~~~~~~~~~~~~t~~GrIvIeL~~d~aP~tv~NF~~L~~~--------~~--~Y~gt~FhRVi 133 (306)
.+++|||||++ +++++|+|+||||.+.||+||+||++||++ +. +|+|+.||||+
T Consensus 5 ~~~~v~~di~i----------------~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi 68 (177)
T 1a58_A 5 DRRRVFLDVTI----------------DGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVI 68 (177)
T ss_dssp GCEEEEEEEEE----------------TTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEE
T ss_pred CCcEEEEEEEE----------------CCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEE
Confidence 47899999999 899999999999999999999999999984 12 89999999999
Q ss_pred CCeEEEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCCCCcccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcC
Q 021845 134 PGQFFLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLRPNAFLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTG 213 (306)
Q Consensus 134 ~~f~iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~de~~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~ 213 (306)
++|||||||+ ..++|.+|.+++ +..|+||++.++|+++|+|||||. +||+++||||||+.
T Consensus 69 ~~f~iQgGd~--~~~~g~gg~si~--------g~~f~dE~~~~~h~~~G~lsmAn~----------gp~tngSQFfIt~~ 128 (177)
T 1a58_A 69 KNFMIQGGDF--TKGDGTGGESIY--------GGMFDDEEFVMKHDEPFVVSMANK----------GPNTNGSQFFITTT 128 (177)
T ss_dssp TTTEEEECCC--SSSSSSCCCCTT--------SSCBCCCCCCSCCCSSSEEEECCS----------STTCBCSCEEEESS
T ss_pred CCCEEEeCCc--cCCCCCCCCccc--------CCcccCcccCcccCCCeEEEEeeC----------CCCCceeEEEEECC
Confidence 9999999997 467788888876 466899999999999999999998 79999999999999
Q ss_pred CCCCCCCCCCCcEEEEEEcCHHHHHHHHcCCCCCCchhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEec
Q 021845 214 PGPCPQLDNKNIVFGTVLQGLDVVAAIASIPTYKPSERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGELK 290 (306)
Q Consensus 214 ~~~~p~LDg~~tVFGrVv~GmdVl~kI~~~~t~~~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l~ 290 (306)
+ ++|||++|+|||||++|||||++|++++++. +++|.++|+|.+||+|.
T Consensus 129 ~--~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~--------------------------~~~P~~~v~I~~~G~l~ 177 (177)
T 1a58_A 129 P--APHLNNIHVVFGKVVSGQEVVTKIEYLKTNS--------------------------KNRPLADVVILNCGELV 177 (177)
T ss_dssp C--CGGGTTTSCEEEEEEECHHHHHHHHTSCBCT--------------------------TSCBSSCEEEEEEEEEC
T ss_pred C--CCccCCCEEEEEEEEcCHHHHHHHHhCCCCC--------------------------CCcCCCCeEEEEeEEEC
Confidence 8 9999999999999999999999999999874 58999999999999984
No 4
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=5.8e-51 Score=358.91 Aligned_cols=170 Identities=31% Similarity=0.562 Sum_probs=154.3
Q ss_pred CCCCCCCCceEEEEEEeCCccCCCCCCCCCcCCCCccceeEEEEecCCCCchHHHHHHHHhcc-Ccc-ccCceeEeecCC
Q 021845 58 PTPDTTITDSIFMDFSLCPTFFRPEGTDPTLCSSPVPLGRLIIGLYGHLAPITVSNFKAMCSS-RSL-YRNTLVHKIFPG 135 (306)
Q Consensus 58 ~~~~~~~~~~v~~di~i~~~~~~~~~~~~~~~~~~t~~GrIvIeL~~d~aP~tv~NF~~L~~~-~~~-Y~gt~FhRVi~~ 135 (306)
....+.++++|||||++ ++|++|+|+||||.+.||+||+||++||++ .++ |+|+.||||+++
T Consensus 8 ~~~~p~~~~~v~~di~i----------------~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~ 71 (188)
T 3ich_A 8 KKKGPKVTVKVYFDLRI----------------GDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKD 71 (188)
T ss_dssp -CCSCEEEEEEEEEEEE----------------TTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBCCEEETT
T ss_pred CCCCCCcCCeEEEEEEE----------------CCEeceeEEEEEcCCCCcHHHHHHHHHhcccCCccccCCEEEEEECC
Confidence 34556789999999999 789999999999999999999999999973 267 999999999999
Q ss_pred eEEEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCCCCcccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCC
Q 021845 136 QFFLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLRPNAFLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPG 215 (306)
Q Consensus 136 f~iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~de~~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~ 215 (306)
|||||||. ..++|.+|.+++ +..|++|++.++|+++|+|||||. +||+++||||||+.+
T Consensus 72 f~iQgGd~--~~~~g~gg~si~--------g~~f~dE~~~l~h~~~G~lsmAn~----------gp~tngSQFfIt~~~- 130 (188)
T 3ich_A 72 FMIQGGDF--TRGDGTGGKSIY--------GERFPDENFKLKHYGPGWVSMANA----------GKDTNGSQFFITTVK- 130 (188)
T ss_dssp TEEEECCT--TTSSSSCCCBTT--------BSCBCCCCCCSCCCSTTEEEECCS----------STTCBCSCEEEESSC-
T ss_pred CEEEcCCc--cCCCCCCCcccc--------CCcccccccCcccCCCeEEEEccC----------CCCCcccEEEEECCC-
Confidence 99999995 467788888876 467889999999999999999998 799999999999998
Q ss_pred CCCCCCCCCcEEEEEEcCHHHHHHHHcCCCCCCchhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEecc
Q 021845 216 PCPQLDNKNIVFGTVLQGLDVVAAIASIPTYKPSERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGELKL 291 (306)
Q Consensus 216 ~~p~LDg~~tVFGrVv~GmdVl~kI~~~~t~~~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l~~ 291 (306)
++|||++|+|||||++|||||++|++++++. .++|.++|+|.+||+|..
T Consensus 131 -~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~--------------------------~~~P~~~v~I~~~~~l~~ 179 (188)
T 3ich_A 131 -TAWLDGKHVVFGKVLEGMEVVRKVESTKTDS--------------------------RDKPLKDVIIADCGKIEV 179 (188)
T ss_dssp -CGGGTTTSCEEEEEEECHHHHHHHHTSCBCT--------------------------TSCBSSCEEEEEEEEEEE
T ss_pred -CcccCCCeeEEEEEeCCHHHHHHHHhCCcCC--------------------------CCeECCCEEEEEeEEEec
Confidence 9999999999999999999999999999974 479999999999999954
No 5
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=1.3e-50 Score=351.71 Aligned_cols=161 Identities=31% Similarity=0.622 Sum_probs=148.9
Q ss_pred CCceEEEEEEeCCccCCCCCCCCCcCCCCccceeEEEEecCCCCchHHHHHHHHhccCcc--------ccCceeEeecCC
Q 021845 64 ITDSIFMDFSLCPTFFRPEGTDPTLCSSPVPLGRLIIGLYGHLAPITVSNFKAMCSSRSL--------YRNTLVHKIFPG 135 (306)
Q Consensus 64 ~~~~v~~di~i~~~~~~~~~~~~~~~~~~t~~GrIvIeL~~d~aP~tv~NF~~L~~~~~~--------Y~gt~FhRVi~~ 135 (306)
.+++||||+++ ++++.|+|+||||.+.||+||+||++||++.++ |+|+.||||+++
T Consensus 2 ~~~~v~~di~i----------------~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~g~g~~~~~~~Y~g~~FhRvi~~ 65 (170)
T 1qng_A 2 KRSKVFFDISI----------------DNSNAGRIIFELFSDITPRTCENFRALCTGEKIGSRGKNLHYKNSIFHRIIPQ 65 (170)
T ss_dssp CSCEEEEEEEE----------------SSSEEEEEEEEECTTTCHHHHHHHHHHHHTCEECTTSSEECCTTCBCCEEETT
T ss_pred CCCEEEEEEeE----------------CCEeceeEEEEEcCCCCCHHHHHHHHHhccCCcCccCccceECCCEEEEEECC
Confidence 47899999999 799999999999999999999999999983267 999999999999
Q ss_pred eEEEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCCCCcccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCC
Q 021845 136 QFFLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLRPNAFLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPG 215 (306)
Q Consensus 136 f~iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~de~~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~ 215 (306)
||||+||+ ..++|.+|.+++ ++.|+||++.++|+++|+|||||. +||+++||||||+.+
T Consensus 66 f~iQgGd~--~~~~g~gg~si~--------g~~f~dE~~~l~h~~~G~lsmAn~----------gp~tngSQFfIt~~~- 124 (170)
T 1qng_A 66 FMCQGGDI--TNGNGSGGESIY--------GRSFTDENFNMKHDQPGLLSMANA----------GPNTNSSQFFITLVP- 124 (170)
T ss_dssp TEEEECCT--TTSSSSCCCBTT--------BSCBCCCCCCSCCCSTTEEEECCS----------STTCBCSCEEEESSC-
T ss_pred CEEEcCCc--cCCCCCCCcccc--------CCcccccccccccCCCCEEEEeec----------CCCCcccEEEEECCC-
Confidence 99999997 457788888876 466899999999999999999987 799999999999998
Q ss_pred CCCCCCCCCcEEEEEEcCHHHHHHHHcCCCCCCchhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEe
Q 021845 216 PCPQLDNKNIVFGTVLQGLDVVAAIASIPTYKPSERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGEL 289 (306)
Q Consensus 216 ~~p~LDg~~tVFGrVv~GmdVl~kI~~~~t~~~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l 289 (306)
++|||++|+|||||++|||||++|+++++. +++|.++|+|.+||+|
T Consensus 125 -~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t~---------------------------~~~P~~~v~I~~cG~l 170 (170)
T 1qng_A 125 -CPWLDGKHVVFGKVIEGMNVVREMEKEGAK---------------------------SGYVKRSVVITDCGEL 170 (170)
T ss_dssp -CGGGTTTSCEEEEEEECHHHHHHHHTTCCT---------------------------TCCCSSCEEEEEEEEC
T ss_pred -CcccCCCeeEEEEEECCHHHHHHHHhCCCC---------------------------CCCCCCCeEEEeceeC
Confidence 999999999999999999999999999884 4899999999999986
No 6
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=1.5e-50 Score=353.36 Aligned_cols=162 Identities=30% Similarity=0.561 Sum_probs=150.2
Q ss_pred CCCceEEEEEEeCCccCCCCCCCCCcCCCCccceeEEEEecCCCCchHHHHHHHHhccCcc--------ccCceeEeecC
Q 021845 63 TITDSIFMDFSLCPTFFRPEGTDPTLCSSPVPLGRLIIGLYGHLAPITVSNFKAMCSSRSL--------YRNTLVHKIFP 134 (306)
Q Consensus 63 ~~~~~v~~di~i~~~~~~~~~~~~~~~~~~t~~GrIvIeL~~d~aP~tv~NF~~L~~~~~~--------Y~gt~FhRVi~ 134 (306)
+.+++||||+++ ++|+.|+|+||||.+.||+||+||++||++ ++ |+|+.||||++
T Consensus 8 ~~~~~v~~di~i----------------~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~-~~g~~g~~~~Y~g~~FhRvi~ 70 (177)
T 1mzw_A 8 PVNPVVFFDVSI----------------GGQEVGRMKIELFADVVPKTAENFRQFCTG-EFRKDGVPIGYKGSTFHRVIK 70 (177)
T ss_dssp CCCCEEEEEEEE----------------TTEEEEEEEEEECTTTCHHHHHHHHHHHHT-CCEETTEECSSTTCBCCEEET
T ss_pred CCCCEEEEEEEE----------------CCeeceeEEEEEcCCCCcHHHHHHHHHHhc-ccCCcCccceECCCEEEEEEC
Confidence 347899999999 789999999999999999999999999998 66 99999999999
Q ss_pred CeEEEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCCCCcccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCC
Q 021845 135 GQFFLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLRPNAFLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGP 214 (306)
Q Consensus 135 ~f~iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~de~~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~ 214 (306)
+|||||||+ ..++|.+|.+++ ++.|+||++.++|+++|+|||||. +||+++|||||++++
T Consensus 71 ~f~iQgGd~--~~~~G~gg~si~--------g~~f~dE~~~l~h~~~G~lsmAn~----------gp~tngSQFfIt~~~ 130 (177)
T 1mzw_A 71 DFMIQGGDF--VNGDGTGVASIY--------RGPFADENFKLRHSAPGLLSMANS----------GPSTNGCQFFITCSK 130 (177)
T ss_dssp TTEEEECCT--TTSSSCCCCCTT--------SSCBCCCCCCSCCCSTTEEEECCS----------STTCBCSCEEEESSC
T ss_pred CCEEEcCCc--ccCCCCCCCccC--------CCcccCcccccccCCCCEEEEccC----------CCCCcceEEEEECCC
Confidence 999999997 467788888876 466889999999999999999998 799999999999998
Q ss_pred CCCCCCCCCCcEEEEEEcCHHHHHHHHcCCCCCCchhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEe
Q 021845 215 GPCPQLDNKNIVFGTVLQGLDVVAAIASIPTYKPSERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGEL 289 (306)
Q Consensus 215 ~~~p~LDg~~tVFGrVv~GmdVl~kI~~~~t~~~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l 289 (306)
.+|||++|+|||||++|||||++|++++++. +++|.++|+|.+||+|
T Consensus 131 --~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~--------------------------~~~P~~~v~I~~cG~l 177 (177)
T 1mzw_A 131 --CDWLDGKHVVFGKIIDGLLVMRKIENVPTGP--------------------------NNKPKLPVVISQCGEM 177 (177)
T ss_dssp --CGGGTTTSCEEEEEEECHHHHHHHHTSCBCG--------------------------GGCBSSCEEEEEEEEC
T ss_pred --CCccCCCeeEEEEEeCCHHHHHHHHhCCcCC--------------------------CCCCCCCEEEEeceeC
Confidence 9999999999999999999999999999863 4899999999999986
No 7
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-50 Score=356.38 Aligned_cols=165 Identities=29% Similarity=0.547 Sum_probs=150.7
Q ss_pred CCCceEEEEEEeCCccCCCCCCCCCcCCCCccceeEEEEecCCCCchHHHHHHHHhcc----------CccccCceeEee
Q 021845 63 TITDSIFMDFSLCPTFFRPEGTDPTLCSSPVPLGRLIIGLYGHLAPITVSNFKAMCSS----------RSLYRNTLVHKI 132 (306)
Q Consensus 63 ~~~~~v~~di~i~~~~~~~~~~~~~~~~~~t~~GrIvIeL~~d~aP~tv~NF~~L~~~----------~~~Y~gt~FhRV 132 (306)
.++++|||||++ ++|++|+|+||||.+.||+||+||++||++ .++|+|+.||||
T Consensus 17 ~~~~~vf~di~i----------------~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRV 80 (192)
T 2he9_A 17 RGSPQCHFDIEI----------------NREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRV 80 (192)
T ss_dssp --CCEEEEEEEE----------------TTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEE
T ss_pred cCCCeEEEEEEE----------------CCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEE
Confidence 568999999999 899999999999999999999999999962 268999999999
Q ss_pred cCCeEEEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCCCCcccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEc
Q 021845 133 FPGQFFLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLRPNAFLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITT 212 (306)
Q Consensus 133 i~~f~iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~de~~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl 212 (306)
+++||||+||+ ..++|.+|.++| +..|+||++.++|+++|+|||||. +||+|+||||||+
T Consensus 81 i~~fmiQgGd~--~~~~G~gg~siy--------g~~f~dE~~~l~h~~~G~lsMAn~----------gp~tngSQFFIt~ 140 (192)
T 2he9_A 81 VKNFMIQGGDF--SEGNGKGGESIY--------GGYFKDENFILKHDRAFLLSMANR----------GKHTNGSQFFITT 140 (192)
T ss_dssp ETTTEEEECCT--TTSSSSCCCCTT--------SSCBCCCCCCSCCCSTTEEEECCS----------STTCBCSCEEEES
T ss_pred ECCCEEEcCcc--cCCCCCCCCccc--------CCcccCccccCCCCCCeEEEEEeC----------CCCCcceEEEEEc
Confidence 99999999997 467788888886 467899999999999999999998 7999999999999
Q ss_pred CCCCCCCCCCCCcEEEEEEcCHHHHHHHHcCCCCCCchhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEecc
Q 021845 213 GPGPCPQLDNKNIVFGTVLQGLDVVAAIASIPTYKPSERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGELKL 291 (306)
Q Consensus 213 ~~~~~p~LDg~~tVFGrVv~GmdVl~kI~~~~t~~~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l~~ 291 (306)
.+ ++|||++|+|||||++|||||++|++++++. .++|.++|+|.+||+|..
T Consensus 141 ~~--~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~--------------------------~~~P~~~v~I~~~g~l~~ 191 (192)
T 2he9_A 141 KP--APHLDGVHVVFGLVISGFEVIEQIENLKTDA--------------------------ASRPYADVRVIDCGVLAT 191 (192)
T ss_dssp SC--CGGGTTTSCEEEEEEECHHHHHHHHTSCBCT--------------------------TSCBSSCEEEEEEEECC-
T ss_pred CC--CcccCCCccEEEEEEeCHHHHHHHHcCCcCC--------------------------CCCCcCCeEEEEeEEEcc
Confidence 98 9999999999999999999999999999874 589999999999999975
No 8
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=1.5e-50 Score=351.52 Aligned_cols=163 Identities=33% Similarity=0.635 Sum_probs=150.0
Q ss_pred CCCCCceEEEEEEeCCccCCCCCCCCCcCCCCccceeEEEEecCCCCchHHHHHHHHhc--cCcc-ccCceeEeecCCeE
Q 021845 61 DTTITDSIFMDFSLCPTFFRPEGTDPTLCSSPVPLGRLIIGLYGHLAPITVSNFKAMCS--SRSL-YRNTLVHKIFPGQF 137 (306)
Q Consensus 61 ~~~~~~~v~~di~i~~~~~~~~~~~~~~~~~~t~~GrIvIeL~~d~aP~tv~NF~~L~~--~~~~-Y~gt~FhRVi~~f~ 137 (306)
.+.++++|||||++ ++|++|+|+||||.+.||+||+||++||+ . ++ |+|+.||||+|+||
T Consensus 7 ~~~~~~~v~~di~i----------------~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~-g~~Y~g~~FhRvi~~f~ 69 (172)
T 2haq_A 7 EPEVTAKVYFDVMI----------------DSEPLGRITIGLFGKDAPLTTENFRQLCTGEH-GFGYKDSIFHRVIQNFM 69 (172)
T ss_dssp CCCCCEEEEEEEEE----------------TTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT-SCCSTTCBCCEEETTTE
T ss_pred CCCCCCeEEEEEEE----------------CCEecceEEEEEeCCCCcHHHHHHHHHhccCC-CcccCCCEEEEEECCCE
Confidence 35679999999999 89999999999999999999999999994 5 77 99999999999999
Q ss_pred EEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCCCCcccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCCCC
Q 021845 138 FLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLRPNAFLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPGPC 217 (306)
Q Consensus 138 iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~de~~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~~~ 217 (306)
|||||. ..++|.+|.+++ ++.|++|++.++|+ +|+|||||. +||+++||||||+++ +
T Consensus 70 iQgGd~--~~~~g~gg~si~--------g~~f~dE~~~l~h~-~G~lsmAn~----------gp~tngSQFfIt~~~--~ 126 (172)
T 2haq_A 70 IQGGDF--TNFDGTGGKSIY--------GEKFADENLNVKHF-VGALSMANA----------GPNTNGSQFFITTAP--T 126 (172)
T ss_dssp EEECCT--TTSSSSCCCCSS--------SSCBCCCCCCSCCC-TTEEEECCS----------STTCBCSCEEEESSC--C
T ss_pred EecCCc--cCCCCCCCcccc--------CCcccCcCCCcccC-ceEEEEccC----------CCCCcccEEEEECCC--C
Confidence 999995 467788888876 46788999999999 899999998 799999999999998 9
Q ss_pred CCCCCCCcEEEEEEcCHHHHHHHHcCCCCCCchhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEe
Q 021845 218 PQLDNKNIVFGTVLQGLDVVAAIASIPTYKPSERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGEL 289 (306)
Q Consensus 218 p~LDg~~tVFGrVv~GmdVl~kI~~~~t~~~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l 289 (306)
++||++|+|||||++|||||++|++++++. .++|.++|+|.+||+|
T Consensus 127 ~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~--------------------------~~~P~~~v~I~~~g~l 172 (172)
T 2haq_A 127 PWLDGRHVVFGKVLDGMDVVLRIEKTKTNS--------------------------HDRPVKPVKIVASGEL 172 (172)
T ss_dssp GGGTTTSCEEEEEEECHHHHHHHHTSCBCG--------------------------GGCBSSCEEEEEEEEC
T ss_pred CccCCCEeEEEEEeCCHHHHHHHHhCCcCC--------------------------CCcCCCCeEEEEeEEC
Confidence 999999999999999999999999999874 4699999999999986
No 9
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=2.5e-50 Score=348.24 Aligned_cols=160 Identities=31% Similarity=0.571 Sum_probs=148.4
Q ss_pred CceEEEEEEeCCccCCCCCCCCCcCCCCccceeEEEEecCCCCchHHHHHHHHhc--cCcc-ccCceeEeecCCeEEEcC
Q 021845 65 TDSIFMDFSLCPTFFRPEGTDPTLCSSPVPLGRLIIGLYGHLAPITVSNFKAMCS--SRSL-YRNTLVHKIFPGQFFLAG 141 (306)
Q Consensus 65 ~~~v~~di~i~~~~~~~~~~~~~~~~~~t~~GrIvIeL~~d~aP~tv~NF~~L~~--~~~~-Y~gt~FhRVi~~f~iq~G 141 (306)
+++||||+++ ++|++|+|+||||.+.||+||+||++||+ . ++ |+|+.||||+|+||||+|
T Consensus 3 ~~~v~~di~i----------------~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~-g~~Y~g~~fhRvi~~f~iQgG 65 (165)
T 2z6w_A 3 NPLVYLDVDA----------------NGKPLGRVVLELKADVVPKTAENFRALCTGEK-GFGYKGSTFHRVIPSFMCQAG 65 (165)
T ss_dssp CCEEEEEEEE----------------TTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT-SCCSTTCBEEEEETTTEEEEC
T ss_pred CCEEEEEEEE----------------CCEeeeEEEEEEeCCCCcHHHHHHHHHhccCC-CccCcCCEEEEEECCCEEEeC
Confidence 6899999999 89999999999999999999999999999 6 77 999999999999999999
Q ss_pred CCCCcCCCCCCCccCCCCCCCCCCCCCCCCCcccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCCCCCCCC
Q 021845 142 RQGLSRRDSKLGELHPPLDFLPPNTDTLRPNAFLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPGPCPQLD 221 (306)
Q Consensus 142 d~~~~~~~g~~g~s~~~~~~~~~~g~~~~de~~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~~~p~LD 221 (306)
|+ ..++|.+|.+++ +..|+||++.++|+++|+|||||. +||+++|||||++.+ .+|||
T Consensus 66 d~--~~~~g~gg~si~--------g~~f~dE~~~l~h~~~G~lsmA~~----------gp~s~~SQFfI~~~~--~~~Ld 123 (165)
T 2z6w_A 66 DF--TNHNGTGGKSIY--------GSRFPDENFTLKHVGPGVLSMANA----------GPNTNGSQFFICTIK--TDWLD 123 (165)
T ss_dssp CT--TTSSSSCCCBTT--------BSCBCCCCCCSCCCSTTEEEECCS----------STTCBCSCEEEESSC--CGGGT
T ss_pred Cc--cCCCCCCCCccc--------CCcccCcccccccCCCCEEEEeeC----------CCCCcccEEEEEcCC--CcccC
Confidence 97 456777888776 456889999999999999999998 799999999999998 99999
Q ss_pred CCCcEEEEEEcCHHHHHHHHcCCCCCCchhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEec
Q 021845 222 NKNIVFGTVLQGLDVVAAIASIPTYKPSERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGELK 290 (306)
Q Consensus 222 g~~tVFGrVv~GmdVl~kI~~~~t~~~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l~ 290 (306)
++|+|||||++|||||++|+++++. +++|.++|+|.+||+|.
T Consensus 124 g~~~vFG~Vv~G~dvv~~I~~~~~~---------------------------~~~P~~~v~I~~~g~l~ 165 (165)
T 2z6w_A 124 GKHVVFGHVIEGMDVVKKIESFGSK---------------------------SGRTSKKIVITDCGQLS 165 (165)
T ss_dssp TTSCEEEEEEECHHHHHHHHHTCCT---------------------------TSCCSSCEEEEEEEECC
T ss_pred CCeeEEEEEEcCHHHHHHHHhCCCC---------------------------CCCCCCcEEEEEeEEEC
Confidence 9999999999999999999998764 48999999999999984
No 10
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=2.4e-50 Score=350.43 Aligned_cols=164 Identities=30% Similarity=0.529 Sum_probs=149.4
Q ss_pred CCCCceEEEEEEeCCccCCCCCCCCCcCCCCccceeEEEEecCCCCchHHHHHHHHhcc-Ccc-ccCceeEeecCCeEEE
Q 021845 62 TTITDSIFMDFSLCPTFFRPEGTDPTLCSSPVPLGRLIIGLYGHLAPITVSNFKAMCSS-RSL-YRNTLVHKIFPGQFFL 139 (306)
Q Consensus 62 ~~~~~~v~~di~i~~~~~~~~~~~~~~~~~~t~~GrIvIeL~~d~aP~tv~NF~~L~~~-~~~-Y~gt~FhRVi~~f~iq 139 (306)
...+++||||+++ ++|+.|+|+||||.+.||+||+||++||++ .++ |+|+.||||+|+||||
T Consensus 7 ~~~~~~v~~di~i----------------~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQ 70 (172)
T 2cmt_A 7 KRNLPRVFFDIRI----------------GNGDAGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQFMCQ 70 (172)
T ss_dssp --CCCEEEEEEEE----------------TTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEE
T ss_pred CCCCCEEEEEEEE----------------CCeecceEEEEEcCCCCCHHHHHHHHHhccCCCceECCCEEEEEECCCEEE
Confidence 3558899999999 789999999999999999999999999984 256 9999999999999999
Q ss_pred cCCCCCcCCCCCCCccCCCCCCCCCCCCCCCCCcccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCCCCCC
Q 021845 140 AGRQGLSRRDSKLGELHPPLDFLPPNTDTLRPNAFLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPGPCPQ 219 (306)
Q Consensus 140 ~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~de~~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~~~p~ 219 (306)
|||+ ..++|.+|.+++ +..|+||++.++|+++|+|||||. +||+++|||||++.+ .+|
T Consensus 71 gGd~--~~~~G~gg~si~--------g~~f~dE~~~l~h~~~G~lsmA~~----------gp~t~gSQFfIt~~~--~~~ 128 (172)
T 2cmt_A 71 GGDF--VKGDGTGGKSIY--------GRKFDDENFQLRHEGFGVLSMANS----------GPNTNGSQFFICTTK--CDW 128 (172)
T ss_dssp ECCT--TTSSSSCCCBTT--------BSCBCCCCCCSCCCSTTEEEECCS----------STTCBCSCEEEESSC--CGG
T ss_pred cCCc--cCCCCCCCCccC--------CCcccccccCcccCCceEEEEeeC----------CCCCcccEEEEECCC--CCc
Confidence 9997 456778888876 456889999999999999999997 799999999999998 999
Q ss_pred CCCCCcEEEEEEcCHHHHHHHHcCCCCCCchhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEec
Q 021845 220 LDNKNIVFGTVLQGLDVVAAIASIPTYKPSERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGELK 290 (306)
Q Consensus 220 LDg~~tVFGrVv~GmdVl~kI~~~~t~~~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l~ 290 (306)
||++|+|||||++|||||++|++++++ +++|.++|+|.+||+|+
T Consensus 129 LDg~~tvFG~Vv~G~dvv~~I~~~~~~---------------------------~~~P~~~v~I~~~g~l~ 172 (172)
T 2cmt_A 129 LDGKHVVFGRVVDGQNVVKKMESVGSK---------------------------SGKVKEPVIISRCGELI 172 (172)
T ss_dssp GTTTSCEEEEEEECHHHHHHGGGGCCT---------------------------TCCCSSCEEEEEEEEEC
T ss_pred cCCCeeEEEEEEcCHHHHHHHHhCCCC---------------------------CCCCCCCEEEEEeEeEC
Confidence 999999999999999999999999875 48999999999999984
No 11
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=2.4e-50 Score=350.92 Aligned_cols=162 Identities=31% Similarity=0.584 Sum_probs=149.3
Q ss_pred CCceEEEEEEeCCccCCCCCCCCCcCCCCccceeEEEEecCCCCchHHHHHHHHhccC-c--------cccCceeEeecC
Q 021845 64 ITDSIFMDFSLCPTFFRPEGTDPTLCSSPVPLGRLIIGLYGHLAPITVSNFKAMCSSR-S--------LYRNTLVHKIFP 134 (306)
Q Consensus 64 ~~~~v~~di~i~~~~~~~~~~~~~~~~~~t~~GrIvIeL~~d~aP~tv~NF~~L~~~~-~--------~Y~gt~FhRVi~ 134 (306)
.+++||||+++ +++++|+|+||||.+.||+||+||++||++. + +|+|+.||||++
T Consensus 2 ~~~~v~~di~i----------------~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~ 65 (173)
T 2igv_A 2 SRSKVFFDITI----------------GGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIP 65 (173)
T ss_dssp CCCEEEEEEEE----------------TTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEET
T ss_pred CCCEEEEEEEE----------------CCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEEC
Confidence 37899999999 8999999999999999999999999999861 2 799999999999
Q ss_pred CeEEEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCCCCcccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCC
Q 021845 135 GQFFLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLRPNAFLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGP 214 (306)
Q Consensus 135 ~f~iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~de~~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~ 214 (306)
+|||||||+ ..++|.+|.++| +..|+||++.++|+++|+|||||. +||+++||||||+.+
T Consensus 66 ~f~iQgGd~--~~~~G~gg~siy--------g~~f~dE~~~l~h~~~G~lsmAn~----------gp~tngSQFfIt~~~ 125 (173)
T 2igv_A 66 NFMIQGGDF--TRGNGTGGESIY--------GEKFPDENFKEKHTGPGVLSMANA----------GPNTNGSQFFLCTVK 125 (173)
T ss_dssp TTEEEECCT--TTSSSSCCCBTT--------BSCBCCCCCCSCCCSTTEEEECCS----------STTCBSSCEEEESSC
T ss_pred CCEEEcCCC--CCCCCCCCCccC--------CCcccCcccccCCCCCeEEEEeeC----------CCCCcceEEEEEcCC
Confidence 999999997 467788888876 456899999999999999999998 799999999999998
Q ss_pred CCCCCCCCCCcEEEEEEcCHHHHHHHHcCCCCCCchhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEec
Q 021845 215 GPCPQLDNKNIVFGTVLQGLDVVAAIASIPTYKPSERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGELK 290 (306)
Q Consensus 215 ~~~p~LDg~~tVFGrVv~GmdVl~kI~~~~t~~~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l~ 290 (306)
++|||++|+|||||++|||||++|+++++. .++|.++|+|.+||+|+
T Consensus 126 --~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~---------------------------~~~P~~~v~I~~~g~l~ 172 (173)
T 2igv_A 126 --TEWLDGKHVVFGRVVEGLDVVKAVESNGSQ---------------------------SGKPVKDCMIADCGQLK 172 (173)
T ss_dssp --CGGGTTTSCEEEEEEECHHHHHHHHTTCCT---------------------------TSCCSSCEEEEEEEEEC
T ss_pred --ccccCCCeeEEEEEecCHHHHHHHHhCCCC---------------------------CCCCCCCEEEEEeEEEc
Confidence 999999999999999999999999999885 48999999999999985
No 12
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=3.5e-50 Score=347.11 Aligned_cols=160 Identities=27% Similarity=0.570 Sum_probs=148.5
Q ss_pred CceEEEEEEeCCccCCCCCCCCCcCCCCccceeEEEEecCCCCchHHHHHHHHhc--cCcc-ccCceeEeecCCeEEEcC
Q 021845 65 TDSIFMDFSLCPTFFRPEGTDPTLCSSPVPLGRLIIGLYGHLAPITVSNFKAMCS--SRSL-YRNTLVHKIFPGQFFLAG 141 (306)
Q Consensus 65 ~~~v~~di~i~~~~~~~~~~~~~~~~~~t~~GrIvIeL~~d~aP~tv~NF~~L~~--~~~~-Y~gt~FhRVi~~f~iq~G 141 (306)
+++|||||++ ++|+.|+|+||||.+.||+||+||++||+ . ++ |+|+.||||+++||||+|
T Consensus 2 ~p~vf~di~i----------------~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~-g~~Y~g~~fhRvi~~f~iQgG 64 (164)
T 3pmp_A 2 MANVFFNISI----------------NDKPEGRIVFKLYDEAVPKTAKNFRELATGQH-GFGYKDSIFHRVIPQFMLQGG 64 (164)
T ss_dssp CCCEEEEEEE----------------TTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT-SCSSTTCBEEEEETTTEEEEC
T ss_pred CCEEEEEEEE----------------CCEEeeEEEEEEeCCCCcHHHHHHHHHhcccC-CCcccCCEEEEEECCCeEEeC
Confidence 6899999999 78999999999999999999999999999 5 67 999999999999999999
Q ss_pred CCCCcCCCCCCCccCCCCCCCCCCCCCCCCCcccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCCCCCCCC
Q 021845 142 RQGLSRRDSKLGELHPPLDFLPPNTDTLRPNAFLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPGPCPQLD 221 (306)
Q Consensus 142 d~~~~~~~g~~g~s~~~~~~~~~~g~~~~de~~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~~~p~LD 221 (306)
|. ..+++.+|.+++ +..|++|++.++|+++|+|||||. +||+++|||||++.+ .+|||
T Consensus 65 d~--~~~~g~gg~si~--------g~~~~dE~~~l~h~~~G~lsma~~----------g~~t~~SQFfIt~~~--~~~Ld 122 (164)
T 3pmp_A 65 DF--TRHNGTGGKSIY--------GEKFADENFQVKHTKPGLLSMANA----------GANTNGSQFFITTVP--TSWLD 122 (164)
T ss_dssp CT--TTSSSSCCCBTT--------BSCBCCCCCCSCCCSTTEEEECBS----------STTCBCSCEEEESSC--CGGGT
T ss_pred CC--CCCCCCCCcccC--------CccccccccccCcCCCcEEEEeeC----------CCCCcccEEEEECCC--ChhhC
Confidence 95 467788888876 567899999999999999999998 799999999999998 99999
Q ss_pred CCCcEEEEEEcCHHHHHHHHcCCCCCCchhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEec
Q 021845 222 NKNIVFGTVLQGLDVVAAIASIPTYKPSERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGELK 290 (306)
Q Consensus 222 g~~tVFGrVv~GmdVl~kI~~~~t~~~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l~ 290 (306)
++|+|||||++|||||++|++++++ .++|.++|+|.+||+|.
T Consensus 123 ~~~~vFG~Vv~G~~vv~~I~~~~~~---------------------------~~~P~~~v~I~~cg~l~ 164 (164)
T 3pmp_A 123 GKHVVFGEVIEGLDIVRKVEGKGSA---------------------------SGKTNATIKITDCGTVA 164 (164)
T ss_dssp TTSCEEEEEEECHHHHHHHHTTCCT---------------------------TCCCSSCEEEEEEEEC-
T ss_pred CCccEEEEEeCCHHHHHHHHhCCCC---------------------------CCCcccCEEEEeCeEEC
Confidence 9999999999999999999999886 38999999999999984
No 13
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=2.2e-50 Score=354.67 Aligned_cols=168 Identities=30% Similarity=0.541 Sum_probs=154.6
Q ss_pred CCCCCCceEEEEEEeCCccCCCCCCCCCcCCCCccceeEEEEecCCCCchHHHHHHHHhcc--CccccCceeEeecCCeE
Q 021845 60 PDTTITDSIFMDFSLCPTFFRPEGTDPTLCSSPVPLGRLIIGLYGHLAPITVSNFKAMCSS--RSLYRNTLVHKIFPGQF 137 (306)
Q Consensus 60 ~~~~~~~~v~~di~i~~~~~~~~~~~~~~~~~~t~~GrIvIeL~~d~aP~tv~NF~~L~~~--~~~Y~gt~FhRVi~~f~ 137 (306)
.++.++++|||||++ +++++|+|+||||.+.||+||+||++||++ +.+|+|+.||||+++||
T Consensus 7 ~~p~~~~~v~~di~i----------------~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~ 70 (185)
T 4fru_A 7 KGPKVTVKVYFDLRI----------------GDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFM 70 (185)
T ss_dssp EEEEEEEEEEEEEEE----------------TTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTE
T ss_pred CCCCcCcEEEEEEEE----------------CCEecceEEEEEeCCCCcHHHHHHHHHHhcCCCCeEcCCEEEEeeCCCe
Confidence 346789999999999 789999999999999999999999999985 23799999999999999
Q ss_pred EEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCCCCcccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCCCC
Q 021845 138 FLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLRPNAFLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPGPC 217 (306)
Q Consensus 138 iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~de~~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~~~ 217 (306)
|||||+ ..+++.+|.+++ +..|++|++.++|+++|+|||||. ++|+++|||||++.+ .
T Consensus 71 iQgGd~--~~~~g~gg~si~--------g~~f~de~~~~~h~~~G~lsma~~----------gp~t~~SQFfI~~~~--~ 128 (185)
T 4fru_A 71 IQGGDF--TRGDGTGGKSIY--------GERFPDENFKLKHYGPGWVSMANA----------GKDTNGSQFFITTVK--T 128 (185)
T ss_dssp EEECCT--TTSSSSCCCBTT--------BSCBCCCCCCSCCCSTTEEEECCS----------STTCBCSCEEEESSC--C
T ss_pred EEECCC--CCCCCCCCcccc--------CCccCccccccCcCCCeEEEEeeC----------CCCCcceEEEEEeCC--C
Confidence 999997 467788888876 467899999999999999999998 799999999999998 9
Q ss_pred CCCCCCCcEEEEEEcCHHHHHHHHcCCCCCCchhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEecc
Q 021845 218 PQLDNKNIVFGTVLQGLDVVAAIASIPTYKPSERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGELKL 291 (306)
Q Consensus 218 p~LDg~~tVFGrVv~GmdVl~kI~~~~t~~~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l~~ 291 (306)
+|||++|+|||||++|||||++|++++++. +++|.++|+|.+||+|..
T Consensus 129 ~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~--------------------------~~~P~~~v~I~~~g~l~~ 176 (185)
T 4fru_A 129 AWLDGKHVVFGKVLEGMEVVRKVETTKTDG--------------------------RDKPLKDVTIADCGKIEV 176 (185)
T ss_dssp GGGTTTSCEEEEEEECHHHHHHHHTSCBCT--------------------------TSCBSSCEEEEEEEEEEE
T ss_pred cccCCCccEEEEEeCCHHHHHHHHhCCCCC--------------------------CCcCCCCEEEEEceEEec
Confidence 999999999999999999999999999874 589999999999999976
No 14
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=6.6e-50 Score=351.20 Aligned_cols=166 Identities=28% Similarity=0.570 Sum_probs=149.2
Q ss_pred CCCCCCceEEEEEEeCCccCCCCCCCCCcCCCCccceeEEEEecCCCCchHHHHHHHHhcc-Ccc-ccCceeEeecCCeE
Q 021845 60 PDTTITDSIFMDFSLCPTFFRPEGTDPTLCSSPVPLGRLIIGLYGHLAPITVSNFKAMCSS-RSL-YRNTLVHKIFPGQF 137 (306)
Q Consensus 60 ~~~~~~~~v~~di~i~~~~~~~~~~~~~~~~~~t~~GrIvIeL~~d~aP~tv~NF~~L~~~-~~~-Y~gt~FhRVi~~f~ 137 (306)
+.+..+++||||+++ +++++|+|+||||.+.||+||+||++||++ .++ |+|+.||||+++||
T Consensus 17 ~~~~~~p~v~~di~i----------------~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~ 80 (184)
T 3rdd_A 17 FQGMVNPTVFFDIAV----------------DGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFM 80 (184)
T ss_dssp ----CCCEEEEEEEE----------------TTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTE
T ss_pred cccCCCCEEEEEEeE----------------CCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcccCCCEEEEccCCcE
Confidence 444678999999999 899999999999999999999999999986 133 99999999999999
Q ss_pred EEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCCCCcccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCCCC
Q 021845 138 FLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLRPNAFLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPGPC 217 (306)
Q Consensus 138 iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~de~~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~~~ 217 (306)
|||||+ ..+++.+|.+++ +..|++|++.++|+++|+|||||. +||+++|||||++++ .
T Consensus 81 iQgGd~--~~~~g~gg~si~--------g~~~~de~~~l~h~~~G~lsmA~~----------gp~s~gSQFfIt~~~--~ 138 (184)
T 3rdd_A 81 CQGGDF--TRHNGTGGKSIY--------GEKFEDENFILKHTGPGILSMANA----------GPNTNGSQFFICTAK--T 138 (184)
T ss_dssp EEECCT--TTSSSSCCCBTT--------BSCBCCCCCCSCCCSTTEEEECCS----------STTCBSSCEEEESSC--C
T ss_pred EEeCCC--CCCCCCCCcccC--------CCcccCcccccccCCCcEEEEEeC----------CCCCcccEEEEEeCC--c
Confidence 999996 467788888776 466889999999999999999997 799999999999998 9
Q ss_pred CCCCCCCcEEEEEEcCHHHHHHHHcCCCCCCchhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEec
Q 021845 218 PQLDNKNIVFGTVLQGLDVVAAIASIPTYKPSERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGELK 290 (306)
Q Consensus 218 p~LDg~~tVFGrVv~GmdVl~kI~~~~t~~~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l~ 290 (306)
++||++|+|||||++|||||++|++++++ .++|.++|+|.+||+|+
T Consensus 139 ~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~---------------------------~g~P~~~v~I~~cG~l~ 184 (184)
T 3rdd_A 139 EWLDGKHVVFGKVKEGMNIVEAMERFGSR---------------------------NGKTSKKITIADCGQLE 184 (184)
T ss_dssp GGGTTTSCEEEEEEECHHHHHHHHTTCCT---------------------------TSCCSSCEEEEEEEECC
T ss_pred hhhCCCceEEEEEecCHHHHHHHHhcCCC---------------------------CCCCcCCeEEEeCeEEC
Confidence 99999999999999999999999999775 48999999999999985
No 15
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=2.3e-49 Score=348.17 Aligned_cols=162 Identities=31% Similarity=0.604 Sum_probs=147.3
Q ss_pred CCCCceEEEEEEeCCccCCCCCCCCCcCCCCccceeEEEEecCCCCchHHHHHHHHhcc-Ccc--------ccCceeEee
Q 021845 62 TTITDSIFMDFSLCPTFFRPEGTDPTLCSSPVPLGRLIIGLYGHLAPITVSNFKAMCSS-RSL--------YRNTLVHKI 132 (306)
Q Consensus 62 ~~~~~~v~~di~i~~~~~~~~~~~~~~~~~~t~~GrIvIeL~~d~aP~tv~NF~~L~~~-~~~--------Y~gt~FhRV 132 (306)
...+++||||+++ ++++.|+|+||||.+.||+||+||++||++ .++ |+|+.||||
T Consensus 16 ~~~~~~v~~di~i----------------~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRV 79 (186)
T 2poy_A 16 FQGNPVVYFDISI----------------GQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRI 79 (186)
T ss_dssp --CCCEEEEEEEE----------------TTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEE
T ss_pred cCCCCEEEEEEeE----------------CCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEE
Confidence 3568999999999 789999999999999999999999999973 256 999999999
Q ss_pred cCCeEEEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCCCCcccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEc
Q 021845 133 FPGQFFLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLRPNAFLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITT 212 (306)
Q Consensus 133 i~~f~iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~de~~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl 212 (306)
+++||||+||+ ..++|.+|.+++ ++.|+||++.++|+++|+|||||. +||+|+||||||+
T Consensus 80 i~~f~iQgGd~--~~~~G~gg~si~--------g~~f~dE~~~l~h~~~G~lsMAn~----------gpntngSQFFIt~ 139 (186)
T 2poy_A 80 IPQFMIQGGDF--TRGDGTGGESIY--------GSKFRDENFVYTHDAPFLLSMANA----------GPNTNGSQFFITT 139 (186)
T ss_dssp ETTTEEEECCT--TTSSSSCCCCTT--------C-CBCCCCCCSCCCSTTEEEECCS----------STTCBCSCEEEES
T ss_pred eCCCEEEeCCC--CCCCCCCCCccC--------CCcccCcccccccCCCcEEEEeeC----------CCCCcccEEEEEC
Confidence 99999999997 467788888876 466899999999999999999997 7999999999999
Q ss_pred CCCCCCCCCCCCcEEEEEEcCHHHHHHHHcCCCCCCchhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeE
Q 021845 213 GPGPCPQLDNKNIVFGTVLQGLDVVAAIASIPTYKPSERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGE 288 (306)
Q Consensus 213 ~~~~~p~LDg~~tVFGrVv~GmdVl~kI~~~~t~~~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~ 288 (306)
.+ ++|||++|+|||||++|||||++|+++++. +++|.++|+|.+||+
T Consensus 140 ~~--~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~---------------------------~~~P~~~v~I~~cG~ 186 (186)
T 2poy_A 140 VP--CPWLDGKHVVFGKVLEGMEVVKSIEKCGSQ---------------------------NGKPTKSVCITASGV 186 (186)
T ss_dssp SC--CGGGTTTSCEEEEEEECHHHHHHHHHTCCT---------------------------TSCCSSCEEEEEEEC
T ss_pred CC--CcccCCCeeEEEEEecCHHHHHHHHhCCCC---------------------------CCCCCCCEEEEeCCC
Confidence 98 999999999999999999999999999885 489999999999996
No 16
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=9.7e-49 Score=346.08 Aligned_cols=163 Identities=28% Similarity=0.543 Sum_probs=149.4
Q ss_pred CCCceEEEEEEeCCccCCCCCCCCCcCCCCccceeEEEEecCCCCchHHHHHHHHhcc-Ccc-ccCceeEeecCCeEEEc
Q 021845 63 TITDSIFMDFSLCPTFFRPEGTDPTLCSSPVPLGRLIIGLYGHLAPITVSNFKAMCSS-RSL-YRNTLVHKIFPGQFFLA 140 (306)
Q Consensus 63 ~~~~~v~~di~i~~~~~~~~~~~~~~~~~~t~~GrIvIeL~~d~aP~tv~NF~~L~~~-~~~-Y~gt~FhRVi~~f~iq~ 140 (306)
..+++|||||++ ++|++|+|+||||.+.||+||+||++||++ .++ |+|+.||||+++|+|||
T Consensus 25 ~~~p~v~~di~i----------------~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQg 88 (193)
T 3k2c_A 25 EASGNVYFDVYA----------------NEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGFMVQG 88 (193)
T ss_dssp -CTTCEEEEEEE----------------TTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSSSTTCBEEEEETTTEEEE
T ss_pred cCCCEEEEEEeE----------------CCEEeeEEEEEEcCCCChHHHHHHHHHhccccCCcccCCEEEEEeCCCEEEe
Confidence 557899999999 899999999999999999999999999983 145 99999999999999999
Q ss_pred CCCCCcCCCCCCCccCCCCCCCCCCCCCCCCCcccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCCCCCCC
Q 021845 141 GRQGLSRRDSKLGELHPPLDFLPPNTDTLRPNAFLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPGPCPQL 220 (306)
Q Consensus 141 Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~de~~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~~~p~L 220 (306)
||. ..+++.+|.+++ +..|++|++.++|+++|+|||||. ++|+++|||||++++ .++|
T Consensus 89 Gd~--~~~~g~gg~si~--------g~~f~dE~~~l~h~~~G~lsmAn~----------gp~t~gSQFFIt~~~--~~~L 146 (193)
T 3k2c_A 89 GDY--TAHNGTGGRSIY--------GEKFPDENFELKHTKEGILSMANC----------GAHTNGSQFFITLGK--TQWL 146 (193)
T ss_dssp CCT--TTSSSSCCCCTT--------SSCBCCCCCCSCCCSTTEEEECCS----------STTCBCSCEEEESSC--CGGG
T ss_pred CCC--CCCCCcCCcccC--------CCcccccccccccCCCcEEEEEeC----------CCCCCccEEEEECCC--Cccc
Confidence 995 467778888876 467889999999999999999998 799999999999998 9999
Q ss_pred CCCCcEEEEEEcCHHHHHHHHcCCCCCCchhhhhhhhhHhhhcccccccccccCCCCC--CcEEEeeeeEec
Q 021845 221 DNKNIVFGTVLQGLDVVAAIASIPTYKPSERIQKYNELAAFIGDKRADTARAIWNRPL--KTVYISDCGELK 290 (306)
Q Consensus 221 Dg~~tVFGrVv~GmdVl~kI~~~~t~~~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~--~~V~I~~cg~l~ 290 (306)
|++|+|||||++|||||++|++++++. ++|. ++|+|.+||+|.
T Consensus 147 Dg~~tVFG~Vv~Gmdvv~~I~~~~t~~---------------------------g~P~~~~~v~I~~cG~l~ 191 (193)
T 3k2c_A 147 DEKHVVFGEVVEGMDVVHKIAKYGSES---------------------------GQVKKGYRIEIRDCGVLG 191 (193)
T ss_dssp TTTSCEEEEEEECHHHHHHHHTTCCTT---------------------------CCCCTTCCEEEEEEEECC
T ss_pred CCCccEEEEEeCCHHHHHHHHhcCCCC---------------------------CcCccCccEEEEEceEeC
Confidence 999999999999999999999998863 7899 999999999986
No 17
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=1.7e-48 Score=352.02 Aligned_cols=163 Identities=26% Similarity=0.508 Sum_probs=149.6
Q ss_pred CCceEEEEEEeCCccCCCCCCCCCcCCCCccceeEEEEecCCCCchHHHHHHHHhccCc-------cccCceeEeecCCe
Q 021845 64 ITDSIFMDFSLCPTFFRPEGTDPTLCSSPVPLGRLIIGLYGHLAPITVSNFKAMCSSRS-------LYRNTLVHKIFPGQ 136 (306)
Q Consensus 64 ~~~~v~~di~i~~~~~~~~~~~~~~~~~~t~~GrIvIeL~~d~aP~tv~NF~~L~~~~~-------~Y~gt~FhRVi~~f 136 (306)
.+++||||+++ ++|++|+|+||||.+.||+||+||++||+++. +|+|+.||||+++|
T Consensus 58 ~~~~V~~disi----------------~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~~~~Y~gt~FHRVi~~F 121 (229)
T 1z81_A 58 SNPVVFMDINL----------------GNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKEF 121 (229)
T ss_dssp TCCEEEEEEEE----------------TTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSSBCSSTTEECCEEETTT
T ss_pred CCcEEEEEEeE----------------CCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCCCceECCCEEEEEeCCC
Confidence 47899999999 78999999999999999999999999999721 79999999999999
Q ss_pred EEEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCCCCcccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCCC
Q 021845 137 FFLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLRPNAFLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPGP 216 (306)
Q Consensus 137 ~iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~de~~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~~ 216 (306)
||||||+ ..++|.+|.+++ ++.|+||++.++|+++|+|||||. +||+++||||||+.+
T Consensus 122 miQgGD~--~~g~G~Gg~siy--------g~~f~dE~~~l~h~~~G~LsMAn~----------gpntngSQFFIt~~~-- 179 (229)
T 1z81_A 122 MIQGGDF--INHNGSGSLSIY--------GEKFDDENFDIKHDKEGLLSMANS----------GPNTNGCQFFITTKK-- 179 (229)
T ss_dssp EEEECCT--TTSSSCCCCBTT--------BSCCCCCCCCSCCCSTTEEEECCS----------SSSCCCSCEEEESSC--
T ss_pred EEEcCCC--cCCCCCCCCccC--------CCcccccccccccCCCcEEEeccC----------CCCCcccEEEEECCC--
Confidence 9999997 467788888876 466899999999999999999998 799999999999998
Q ss_pred CCCCCCCCcEEEEEE--cCHHHHHHHHcCCCCCCchhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEe
Q 021845 217 CPQLDNKNIVFGTVL--QGLDVVAAIASIPTYKPSERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGEL 289 (306)
Q Consensus 217 ~p~LDg~~tVFGrVv--~GmdVl~kI~~~~t~~~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l 289 (306)
+++||++|+|||||+ +|||||++|++++++. ..++|.++|+|.+||+|
T Consensus 180 ~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~-------------------------~~~~P~~~V~I~~cG~l 229 (229)
T 1z81_A 180 CEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTP-------------------------YIYKPKIPINVVECGEL 229 (229)
T ss_dssp CGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCT-------------------------TTCCBSSCEEEEEEEEC
T ss_pred CcccCCCeeEEEEEEecCcHHHHHHHHhCCCCC-------------------------CCCCCCCCeEEEeCeeC
Confidence 999999999999999 9999999999999874 02899999999999986
No 18
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=1.1e-48 Score=340.20 Aligned_cols=167 Identities=28% Similarity=0.530 Sum_probs=122.3
Q ss_pred CCceEEEEEEeCCccCCCCCCCCCcCCCCccceeEEEEecCCCCchHHHHHHHHhcc-Ccc-ccCceeEeecCCeEEEcC
Q 021845 64 ITDSIFMDFSLCPTFFRPEGTDPTLCSSPVPLGRLIIGLYGHLAPITVSNFKAMCSS-RSL-YRNTLVHKIFPGQFFLAG 141 (306)
Q Consensus 64 ~~~~v~~di~i~~~~~~~~~~~~~~~~~~t~~GrIvIeL~~d~aP~tv~NF~~L~~~-~~~-Y~gt~FhRVi~~f~iq~G 141 (306)
+| +|||||++.|+ ....|++|+|+||||.+.||+||+||++||++ .++ |+|+.||||+++||||||
T Consensus 2 it-~vf~di~i~~~-----------~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgG 69 (172)
T 2c3b_A 2 MS-QVFFDVEYAPV-----------GTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIPNFMIQGG 69 (172)
T ss_dssp CC-CEEEEEEECCT-----------TCSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTSSTTCBCCEEETTTEEEEC
T ss_pred ce-EEEEEEEeCCC-----------CceecccccEEEEEcCCCCcHHHHHHHHHhccCCCcccCCCEEEEEeCCCEEEeC
Confidence 57 99999999421 12357789999999999999999999999993 156 999999999999999999
Q ss_pred CCCCcCCCCCCCccCCCCCCCCCCCCCCCCCcccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCCCCCCCC
Q 021845 142 RQGLSRRDSKLGELHPPLDFLPPNTDTLRPNAFLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPGPCPQLD 221 (306)
Q Consensus 142 d~~~~~~~g~~g~s~~~~~~~~~~g~~~~de~~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~~~p~LD 221 (306)
|. ..++|.+|.++| ++.|++|++.++|+++|+|||||. +||+++|||||++.+ .+|||
T Consensus 70 d~--~~~~g~gg~si~--------g~~f~dE~~~~~h~~~G~lsmA~~----------gp~t~gSQFfIt~~~--~~~LD 127 (172)
T 2c3b_A 70 DF--TRGNGTGGRSIY--------GDKFADENFSRKHDKKGILSMANA----------GPNTNGSQFFITTAV--TSWLD 127 (172)
T ss_dssp C--------------------------------CHHHHHTCEEEEC-------------------CEEEECSC--CTTCC
T ss_pred Cc--CCCCCCCCcccC--------CCcccCcccccccCCCeEEEEeeC----------CCCCcccEEEEECCC--CCccC
Confidence 94 367788888876 466889988999999999999998 799999999999998 99999
Q ss_pred CCCcEEEEEEc--CHHHHHHHHcCCCCCCchhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEe
Q 021845 222 NKNIVFGTVLQ--GLDVVAAIASIPTYKPSERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGEL 289 (306)
Q Consensus 222 g~~tVFGrVv~--GmdVl~kI~~~~t~~~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l 289 (306)
++|+|||||++ |||||++|++++++. | +++|.++|+|.+||+|
T Consensus 128 g~~tvFG~Vv~~~G~dvv~~I~~~~t~~---------------~----------~~~P~~~v~I~~cG~l 172 (172)
T 2c3b_A 128 GKHVVFGEVADEKSYSVVKEIEALGSSS---------------G----------SVRSNTRPKIVNCGEL 172 (172)
T ss_dssp SCCEEEEEECSHHHHHHHHHHHTTCCTT---------------S----------CCCSSSCCEEEEEEEC
T ss_pred CCeeEEEEEEecCCHHHHHHHHhCCCCC---------------C----------CccCCCCeEEEeCeeC
Confidence 99999999999 999999999998874 0 1399999999999986
No 19
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=4e-48 Score=351.22 Aligned_cols=174 Identities=24% Similarity=0.376 Sum_probs=147.3
Q ss_pred CCCCCCceEEEEEEeCCccCCCCCCCCCcCCCCccceeEEEEecCCCCchHHHHHHHHhccC----------------c-
Q 021845 60 PDTTITDSIFMDFSLCPTFFRPEGTDPTLCSSPVPLGRLIIGLYGHLAPITVSNFKAMCSSR----------------S- 122 (306)
Q Consensus 60 ~~~~~~~~v~~di~i~~~~~~~~~~~~~~~~~~t~~GrIvIeL~~d~aP~tv~NF~~L~~~~----------------~- 122 (306)
+....+++|||||+| ++|++|+|+||||.+.||+||+||++||++. +
T Consensus 9 p~~~~~p~v~~di~i----------------~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~ 72 (234)
T 2ose_A 9 PNSGKNPRVYMDIVL----------------NNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHI 72 (234)
T ss_dssp CCCCSSCEEEEEEEE----------------TTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------
T ss_pred CcCCCCCEEEEEEEE----------------CCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCC
Confidence 444668999999999 6799999999999999999999999999952 2
Q ss_pred -c-ccCceeEeecCCeEEEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCCCCcccccCCCceEEEEec----CCCCCCCC
Q 021845 123 -L-YRNTLVHKIFPGQFFLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLRPNAFLLKHSRGGVVSLCL----SENDDDPD 196 (306)
Q Consensus 123 -~-Y~gt~FhRVi~~f~iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~de~~~l~h~~~G~lsma~----~~~~~~~~ 196 (306)
+ |+|+.||||+++|||||||. ..++|.+|.++|+... ...+|+ ++.++|+++|+||||| .
T Consensus 73 ~~~Y~gt~FHRVi~~FmiQgGd~--~~g~G~Gg~siyg~~~---~p~~f~--~~~l~h~~~G~lsMAn~~~~~------- 138 (234)
T 2ose_A 73 NRTYEGCKFHNVLHNNYIVSGDI--YNSNGSSAGTVYCDEP---IPPVFG--DYFYPHESKGLLSLVPYTDES------- 138 (234)
T ss_dssp CCCSTTCBCCEEETTTEEEECCC--C----CCCCCTTTTCC---BCCCCC--SCCCCSCSTTEEEECCEECTT-------
T ss_pred ceEECCcEEEEEECCCEEEcCCc--cCCCCCCCccccCCcc---Cccccc--CcCccCCCCCEEEEecccccC-------
Confidence 5 99999999999999999995 4778888888875420 011254 5679999999999999 5
Q ss_pred CCCCCCCccceEEEEcCC----CCCCCCCCCCcEEEEEEcCHHHHHHHHcCCCCCCchhhhhhhhhHhhhcccccccccc
Q 021845 197 VKLDPHYRNVEFLITTGP----GPCPQLDNKNIVFGTVLQGLDVVAAIASIPTYKPSERIQKYNELAAFIGDKRADTARA 272 (306)
Q Consensus 197 ~~~~p~t~gSqFfItl~~----~~~p~LDg~~tVFGrVv~GmdVl~kI~~~~t~~~~~~~~~~~~~a~~~gd~~a~~~~~ 272 (306)
+||+++||||||+.+ ++++|||++|+|||||++|||||++|++++++.
T Consensus 139 ---gpntngSQFFIt~~~~~~~~g~p~LDg~~tVFG~Vv~GmdVv~~I~~~~t~~------------------------- 190 (234)
T 2ose_A 139 ---GNRYYDSTFMITLDDIRPSNVLDELDRDQVVIGQVYGGLDVLDKINSMIKPY------------------------- 190 (234)
T ss_dssp ---SCEEBCSCEEEESSCCCTTSSGGGSCTTSEEEEEEEECHHHHHHHHHHTCCC-------------------------
T ss_pred ---CCCCccceEEEEecCccccCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCC-------------------------
Confidence 799999999999996 227999999999999999999999999998874
Q ss_pred cCCCCCCcEEEeeeeEeccC
Q 021845 273 IWNRPLKTVYISDCGELKLK 292 (306)
Q Consensus 273 ~~~~P~~~V~I~~cg~l~~~ 292 (306)
+++|.++|+|.+||++.++
T Consensus 191 -~~~P~~~V~I~~~~~l~~p 209 (234)
T 2ose_A 191 -AGRKYPTFSIGKCGAYLDS 209 (234)
T ss_dssp -TTCCCCCEEEEEEEECCCH
T ss_pred -CCCccCCEEEEEEEEecCC
Confidence 5899999999999999884
No 20
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=2.4e-47 Score=328.47 Aligned_cols=153 Identities=28% Similarity=0.444 Sum_probs=139.8
Q ss_pred CCccceeEEEEecCCCCchHHHHHHHHhccCccccCceeEeecCCeEEEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCC
Q 021845 91 SPVPLGRLIIGLYGHLAPITVSNFKAMCSSRSLYRNTLVHKIFPGQFFLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLR 170 (306)
Q Consensus 91 ~~t~~GrIvIeL~~d~aP~tv~NF~~L~~~~~~Y~gt~FhRVi~~f~iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~ 170 (306)
.+|+.|+|+||||.+.||+||+||++||++ ++|+|+.||||+++|+|||||+ .+++.+|.+++ +..|+
T Consensus 5 ~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~-g~Y~g~~fhRvi~~f~iQgGd~---~~~g~gg~si~--------g~~~~ 72 (161)
T 2ok3_A 5 LHTDVGDIKIEVFCERTPKTCENFLALCAS-NYYNGCIFHRNIKGFMVQTGDP---TGTGRGGNSIW--------GKKFE 72 (161)
T ss_dssp EEETTEEEEEEECTTTCHHHHHHHHHHHHT-TTTTTCBCCEEETTTEEEECCT---TSSSSCCCCTT--------SSCBC
T ss_pred EEeCCccEEEEEcCCCCcHHHHHHHHHhhh-cccCCCEEEEEECCCEEecCCC---CCCCCCCCccc--------CCccc
Confidence 368899999999999999999999999999 9999999999999999999997 56777888776 45688
Q ss_pred CCcc-cccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCCCCCCCCCCCcEEEEEEcCHHHHHHHHcCCCCCCc
Q 021845 171 PNAF-LLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPGPCPQLDNKNIVFGTVLQGLDVVAAIASIPTYKPS 249 (306)
Q Consensus 171 de~~-~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~~~p~LDg~~tVFGrVv~GmdVl~kI~~~~t~~~~ 249 (306)
+|.. .++|+++|+|||||. +||+++|||||++++ .+|||++|+|||||++|||||++|+++++++.
T Consensus 73 dE~~~~l~h~~~G~lsma~~----------gp~s~~SQFfI~~~~--~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~- 139 (161)
T 2ok3_A 73 DEYSEYLKHNVRGVVSMANN----------GPNTNGSQFFITYGK--QPHLDMKYTVFGKVIDGLETLDELEKLPVNEK- 139 (161)
T ss_dssp CCCCTTCCSCSTTEEEECCS----------STTCBCSCEEEESSC--CGGGTTTSCEEEEEEECHHHHHHHHTCCBCTT-
T ss_pred cccCcCcCcCCCeEEEEecC----------CCCCcceEEEEEcCC--CCccCCCEeEEEEEeCCHHHHHHHHhCCccCC-
Confidence 8875 689999999999998 799999999999998 99999999999999999999999999999740
Q ss_pred hhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEeccC
Q 021845 250 ERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGELKLK 292 (306)
Q Consensus 250 ~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l~~~ 292 (306)
.++|.++|+|.+|.++.++
T Consensus 140 ------------------------~~~P~~~v~I~~~~i~~~P 158 (161)
T 2ok3_A 140 ------------------------TYRPLNDVHIKDITIHANP 158 (161)
T ss_dssp ------------------------TCCBSSCCBEEEEEEECCS
T ss_pred ------------------------CCCcCCCeEEEEEEEecCC
Confidence 2899999999999999874
No 21
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=1.8e-47 Score=335.93 Aligned_cols=155 Identities=25% Similarity=0.405 Sum_probs=139.9
Q ss_pred CccceeEEEEecCCCCchHHHHHHHHhccCccccCceeEeecCCeEEEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCCC
Q 021845 92 PVPLGRLIIGLYGHLAPITVSNFKAMCSSRSLYRNTLVHKIFPGQFFLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLRP 171 (306)
Q Consensus 92 ~t~~GrIvIeL~~d~aP~tv~NF~~L~~~~~~Y~gt~FhRVi~~f~iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~d 171 (306)
+|++|+|+||||.+.||+||+||++||++ +||+|+.||||+++|||||||+ .+++.+|.++| +..|++
T Consensus 22 ~t~~G~i~ieL~~~~aP~t~~NF~~L~~~-g~Y~g~~FhRvi~~f~iQgGd~---~~~g~gg~si~--------g~~~~d 89 (185)
T 2poe_A 22 ITNYGDLKFELFCSQCPKACKNFLALSAS-GYYKNTIFHKNIKGFIIQGGDP---TGTGKGGESIY--------GRYFDD 89 (185)
T ss_dssp EETTEEEEEEECTTTCHHHHHHHHHHHHT-TTTTTEEEEEECTTSEEEEEET---TSSSSCCCBTT--------BSCBCC
T ss_pred EecCccEEEEEeCCCCcHHHHHHHHHhcc-CCCCCCEEEEEECCCEEEcCCC---CCCCCCCCccC--------CCcccc
Confidence 57899999999999999999999999999 9999999999999999999997 56777888776 456888
Q ss_pred Cc-ccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCCCCCCCCCCCcEEEEEEcCHHHHHHHHcCCCCCCch
Q 021845 172 NA-FLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPGPCPQLDNKNIVFGTVLQGLDVVAAIASIPTYKPSE 250 (306)
Q Consensus 172 e~-~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~~~p~LDg~~tVFGrVv~GmdVl~kI~~~~t~~~~~ 250 (306)
|. +.++|+++|+|||||.+... .||+++|||||++++ ++|||++|+|||||++|||||++|++++++.
T Consensus 90 E~~~~l~h~~~G~lsmA~~g~~~------~p~s~gSQFFIt~~~--~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~--- 158 (185)
T 2poe_A 90 EIYPELKYDRRGILSMASKGASK------KPNTNGSQFFITYSS--LPQLNGEYVIFGKLIDGFETLNTLENCPSDK--- 158 (185)
T ss_dssp CCCTTSCCCSTTEEEECCSCC-C------CCSCBCSCEEEESSC--CGGGTTTSCEEEEEEECHHHHHHHHHSCBCT---
T ss_pred cccCCCccCCCeEEEEecCCCCC------CCCCccceEEEECCC--CCccCCCeeEEEEEeCCHHHHHHHHhCCcCC---
Confidence 87 68999999999999983100 299999999999998 9999999999999999999999999999874
Q ss_pred hhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEeccC
Q 021845 251 RIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGELKLK 292 (306)
Q Consensus 251 ~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l~~~ 292 (306)
.++|.++|+|.+|+++.++
T Consensus 159 -----------------------~~~P~~~v~I~~~~i~~dP 177 (185)
T 2poe_A 159 -----------------------SHKPIDEIIIKDIVIHSNP 177 (185)
T ss_dssp -----------------------TSCBSSCCEEEEEEEECCC
T ss_pred -----------------------CCCcCCCeEEEEEEEECCC
Confidence 4899999999999999874
No 22
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=5.5e-47 Score=325.83 Aligned_cols=151 Identities=29% Similarity=0.415 Sum_probs=138.6
Q ss_pred CCCCccceeEEEEecCCCCchHHHHHHHHhccCccccCceeEeecCCeEEEcCCCCCcCCCCCCCccCCCCCCCCCCCCC
Q 021845 89 CSSPVPLGRLIIGLYGHLAPITVSNFKAMCSSRSLYRNTLVHKIFPGQFFLAGRQGLSRRDSKLGELHPPLDFLPPNTDT 168 (306)
Q Consensus 89 ~~~~t~~GrIvIeL~~d~aP~tv~NF~~L~~~~~~Y~gt~FhRVi~~f~iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~ 168 (306)
++..|+.|+|+||||.+.||+||+||++||+. ++|+|+.||||+++|||||||+ .++|.+|.+++ +..
T Consensus 8 v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~-g~Y~g~~fhRvi~~f~iQgGd~---~~~g~gg~si~--------g~~ 75 (160)
T 2fu0_A 8 AIIYTTMGDIHISLFYKECKKTVQNFSVHSIN-GYYNNCIFHRVIKHFMVQTGDP---SGDGTGGESIW--------GNE 75 (160)
T ss_dssp EEEEETTEEEEEEECTTTCHHHHHHHHHHHHT-TTTTTCBCCEEETTTEEEECCT---TSSSSCCCCTT--------SSC
T ss_pred EEEEecCccEEEEEeCCCChHHHHHHHHHhcc-CccCCCEEEEEECCCEEEeCCc---CCCCCCCCccc--------CCC
Confidence 33577889999999999999999999999999 9999999999999999999997 56777888776 456
Q ss_pred CCCCcc-cccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCCCCCCCCCCCcEEEEEEcCHHHHHHHHcCCCCC
Q 021845 169 LRPNAF-LLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPGPCPQLDNKNIVFGTVLQGLDVVAAIASIPTYK 247 (306)
Q Consensus 169 ~~de~~-~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~~~p~LDg~~tVFGrVv~GmdVl~kI~~~~t~~ 247 (306)
|++|.+ .++|+++|+|||||. +||+++|||||++.+ ++|||++|+|||||++|||||++|+++++++
T Consensus 76 ~~dE~~~~l~h~~~G~lsmA~~----------gp~s~~SQFfI~~~~--~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~ 143 (160)
T 2fu0_A 76 FEDEFFDHLNHSKPFMVSMANC----------GPNTNGSQFFITTVP--CPWLDFKHTVFGKVTQGSKIVLDIEKVRTDK 143 (160)
T ss_dssp BCCCCBTTBCSSSSSEEEECCS----------STTCBCSCEEEESSC--CGGGTTTSCEEEEEEECHHHHHHHHTSCBCT
T ss_pred ccccccCCcccCCceEEEEecC----------CCCCcccEEEEECCC--CCccCCCcEEEEEEEcCHHHHHHHHhCCcCC
Confidence 888887 599999999999998 799999999999998 9999999999999999999999999999874
Q ss_pred CchhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEe
Q 021845 248 PSERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGEL 289 (306)
Q Consensus 248 ~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l 289 (306)
.++|.++|+|.+|.++
T Consensus 144 --------------------------~~~P~~~v~I~~~~v~ 159 (160)
T 2fu0_A 144 --------------------------RDKPLEDIKILNIKIN 159 (160)
T ss_dssp --------------------------TSCBSSCCBEEEEEEC
T ss_pred --------------------------CCCcCCCeEEEEEEEe
Confidence 5899999999999986
No 23
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=8.3e-47 Score=326.52 Aligned_cols=147 Identities=24% Similarity=0.401 Sum_probs=135.5
Q ss_pred ccceeEEEEecCCCCchHHHHHHHHhccCccccCceeEeecCCeEEEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCCCC
Q 021845 93 VPLGRLIIGLYGHLAPITVSNFKAMCSSRSLYRNTLVHKIFPGQFFLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLRPN 172 (306)
Q Consensus 93 t~~GrIvIeL~~d~aP~tv~NF~~L~~~~~~Y~gt~FhRVi~~f~iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~de 172 (306)
|++|+|+||||.+.||+||+||++||+. ++|+|+.||||+++|||||||+ .+++.+|.+++ +..|++|
T Consensus 18 t~~G~i~ieL~~~~aP~t~~NF~~L~~~-g~Y~g~~fhRvi~~f~iQgGd~---~~~g~gg~si~--------g~~~~dE 85 (166)
T 2x7k_A 18 TSMGIIVLELYWKHAPKTCKNFAELARR-GYYNGTKFHRIIKDFMIQGGDP---TGTGRGGASIY--------GKQFEDE 85 (166)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHH-TTTTTEECCEEETTTEEEECCT---TSSSSCCCCTT--------SSCBCCC
T ss_pred eCCCcEEEEEccCCCCHHHHHHHHHHhc-CCCCCCEEEEEECCCEEEcCCC---CCCCCCCCccC--------CCccccc
Confidence 4569999999999999999999999999 9999999999999999999997 56777888876 4568888
Q ss_pred c-ccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCCCCCCCCCCCcEEEEEEcCHHHHHHHHcCCCCCCchh
Q 021845 173 A-FLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPGPCPQLDNKNIVFGTVLQGLDVVAAIASIPTYKPSER 251 (306)
Q Consensus 173 ~-~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~~~p~LDg~~tVFGrVv~GmdVl~kI~~~~t~~~~~~ 251 (306)
. ..++|+++|+|||||. +||+++|||||++++ .+|||++|+|||||++|||||++|+++++++
T Consensus 86 ~~~~l~h~~~G~lsmAn~----------gp~s~gSQFfI~~~~--~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~---- 149 (166)
T 2x7k_A 86 LHPDLKFTGAGILAMANA----------GPDTNGSQFFVTLAP--TQWLDGKHTIFGRVCQGIGMVNRVGMVETNS---- 149 (166)
T ss_dssp CCTTSCCCSTTEEEECBS----------STTCBCSCEEEESSC--CGGGTTTSCEEEEEEECHHHHHHHTTSCBCT----
T ss_pred cccccCCCCCeEEEEeeC----------CCCCccceEEEECCC--CCccCCCeeEEEEEEcCHHHHHHHHcCCcCC----
Confidence 7 4799998999999997 799999999999998 9999999999999999999999999999874
Q ss_pred hhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEe
Q 021845 252 IQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGEL 289 (306)
Q Consensus 252 ~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l 289 (306)
.++|.++|+|.+|.++
T Consensus 150 ----------------------~~~P~~~i~I~~~~i~ 165 (166)
T 2x7k_A 150 ----------------------QDRPVDDVKIIKAYPS 165 (166)
T ss_dssp ----------------------TSCBSSCCEEEEEEEC
T ss_pred ----------------------CCCcCCCeEEEEEEEe
Confidence 4799999999999986
No 24
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=1.3e-46 Score=333.05 Aligned_cols=151 Identities=25% Similarity=0.403 Sum_probs=139.2
Q ss_pred CccceeEEEEecCCCCchHHHHHHHHhccCccccCceeEeecCCeEEEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCCC
Q 021845 92 PVPLGRLIIGLYGHLAPITVSNFKAMCSSRSLYRNTLVHKIFPGQFFLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLRP 171 (306)
Q Consensus 92 ~t~~GrIvIeL~~d~aP~tv~NF~~L~~~~~~Y~gt~FhRVi~~f~iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~d 171 (306)
.|+.|+|+||||.+.||+||+||++||+. +||+|+.||||+++|||||||+ .++|.+|.+++ +..|++
T Consensus 25 ~T~~G~I~ieL~~~~aP~tv~NF~~L~~~-g~Ydg~~FhRVi~~f~iQgGd~---~~~g~Gg~si~--------g~~f~d 92 (197)
T 1zkc_A 25 HTNKGDLNLELHCDLTPKTCENFIRLCKK-HYYDGTIFHRSIRNFVIQGGDP---TGTGTGGESYW--------GKPFKD 92 (197)
T ss_dssp EETTEEEEEEECTTTSHHHHHHHHHHHHT-TTTTTEEEEEEETTTEEEECCT---TSSSSCCCBTT--------BSCBCC
T ss_pred EeCCccEEEEEcCCCCcHHHHHHHHHHhc-CCCCCCEEEEEeCCCEEEcCCC---CCCCCCCCccC--------CCcccc
Confidence 56789999999999999999999999999 9999999999999999999997 56777888876 456888
Q ss_pred C-cccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCCCCCCCCCCCcEEEEEEcCHHHHHHHHcCCCCCCch
Q 021845 172 N-AFLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPGPCPQLDNKNIVFGTVLQGLDVVAAIASIPTYKPSE 250 (306)
Q Consensus 172 e-~~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~~~p~LDg~~tVFGrVv~GmdVl~kI~~~~t~~~~~ 250 (306)
| +..++|+++|+|||||. +||+++|||||++.+ +++||++|+|||||++|||||++|++++++.
T Consensus 93 E~~~~l~h~~~G~lsMAn~----------gp~sngSQFFIt~~~--~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~--- 157 (197)
T 1zkc_A 93 EFRPNLSHTGRGILSMANS----------GPNSNRSQFFITFRS--CAYLDKKHTIFGRVVGGFDVLTAMENVESDP--- 157 (197)
T ss_dssp CCCTTCCSCSTTEEEECCS----------STTCBCSCEEEESSC--CGGGTTTSCEEEEEEECHHHHHHHHHSCBCT---
T ss_pred ccCcCcCCCCceEEEEecC----------CCCCcccEEEEEcCC--CCccCCCccEEEEEEcCHHHHHHHHcCCCCC---
Confidence 8 47899999999999998 799999999999998 9999999999999999999999999999874
Q ss_pred hhhhhhhhHhhhcccccccccccC-CCCCCcEEEeeeeEeccC
Q 021845 251 RIQKYNELAAFIGDKRADTARAIW-NRPLKTVYISDCGELKLK 292 (306)
Q Consensus 251 ~~~~~~~~a~~~gd~~a~~~~~~~-~~P~~~V~I~~cg~l~~~ 292 (306)
. ++|.++|+|.+|+++.++
T Consensus 158 -----------------------~~~~P~~~i~I~~~~v~~dP 177 (197)
T 1zkc_A 158 -----------------------KTDRPKEEIRIDATTVFVDP 177 (197)
T ss_dssp -----------------------TTCCBSSCCEEEEEEEEECT
T ss_pred -----------------------CCCCcCCCeEEEEEEEEcCC
Confidence 3 899999999999999874
No 25
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=1.6e-46 Score=333.97 Aligned_cols=161 Identities=24% Similarity=0.377 Sum_probs=137.9
Q ss_pred CCccceeEEEEecCCCCchHHHHHHHHhccCccccCceeEeecCCeEEEcC-----CCCCcCCCCCCCccCCCCCCCCCC
Q 021845 91 SPVPLGRLIIGLYGHLAPITVSNFKAMCSSRSLYRNTLVHKIFPGQFFLAG-----RQGLSRRDSKLGELHPPLDFLPPN 165 (306)
Q Consensus 91 ~~t~~GrIvIeL~~d~aP~tv~NF~~L~~~~~~Y~gt~FhRVi~~f~iq~G-----d~~~~~~~g~~g~s~~~~~~~~~~ 165 (306)
..|+.|+|+||||++.||+||+||++||+. +||+|+.||||+++|||||| |+ .++|.+|.++|.... ...
T Consensus 11 l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~-g~Ydg~~FhRvi~~f~iQgG~~~~~Dp---~~~g~gg~si~~~~~-~~~ 85 (201)
T 3bo7_A 11 IVTTQGSLNIELHADMAPRACDSFLRLCAV-KYFDDTIFHRCIRNFMIQGGRAELRQP---SKKKEVQQSPRSISG-FPG 85 (201)
T ss_dssp EEETTEEEEEEECTTTCHHHHHHHHHHHHT-TTTTTCBEEEEETTTEEEECCGGGCCC----------CCSSCCCS-STT
T ss_pred EEeCCCCEEEEEcCCCCcHHHHHHHHHHhc-CccCCCEEEEeeCCCEEEcCcccccCC---CCCCCCCcccccccc-ccC
Confidence 367889999999999999999999999999 99999999999999999999 87 567778888874321 123
Q ss_pred CCCCCCC-cccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCCCCCCCCCCCcEEEEEEcCHHHHHHHHcCC
Q 021845 166 TDTLRPN-AFLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPGPCPQLDNKNIVFGTVLQGLDVVAAIASIP 244 (306)
Q Consensus 166 g~~~~de-~~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~~~p~LDg~~tVFGrVv~GmdVl~kI~~~~ 244 (306)
+..|.+| +..++|+++|+|||||. +||+++|||||++.+ ++|||++|+|||||++|||||++|++++
T Consensus 86 g~~f~dE~~~~l~h~~~G~lsmA~~----------gp~s~gSQFFIt~~~--~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~ 153 (201)
T 3bo7_A 86 GAPFEDEFDNRLVHQGIGVLSMAND----------GKHSNLSEFFITFKS--CEHLNNKHTIFGRVVGGLDVLRQWEKLE 153 (201)
T ss_dssp CCCBCCCCCTTCCCCSTTEEEECCS----------STTCBSSCEEEESSC--CGGGTTTSCEEEEEEECHHHHHHHTTCC
T ss_pred CCcccCcccCCCCcCCCcEEEEeeC----------CCCCcccEEEEECCC--CcccCCCceEEEEEecCHHHHHHHHhCC
Confidence 5678888 47899999999999997 799999999999998 9999999999999999999999999999
Q ss_pred CCCCchhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEeccCCC
Q 021845 245 TYKPSERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGELKLKPN 294 (306)
Q Consensus 245 t~~~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l~~~~~ 294 (306)
++. +++|.++|+|.+|+++.++..
T Consensus 154 t~~--------------------------~~~P~~~i~I~~~~v~~dPf~ 177 (201)
T 3bo7_A 154 TDK--------------------------KDKPLKPPKVEEIIVFKNPFE 177 (201)
T ss_dssp BCT--------------------------TSCBSSCCBEEEEEEEECCC-
T ss_pred cCC--------------------------CCCcCCCeEEEEEEEEcCCcc
Confidence 974 489999999999999998533
No 26
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=1.5e-46 Score=332.47 Aligned_cols=150 Identities=27% Similarity=0.433 Sum_probs=135.1
Q ss_pred CccceeEEEEecCCCCchHHHHHHHHhccCccccCceeEeecCCeEEEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCCC
Q 021845 92 PVPLGRLIIGLYGHLAPITVSNFKAMCSSRSLYRNTLVHKIFPGQFFLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLRP 171 (306)
Q Consensus 92 ~t~~GrIvIeL~~d~aP~tv~NF~~L~~~~~~Y~gt~FhRVi~~f~iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~d 171 (306)
.|++|+|+||||.+.||+||+||++||+. ++|+|+.||||+++|||||||+ .++|.+|.+++ +..|++
T Consensus 44 ~T~~G~I~ieL~~~~aP~tv~NF~~L~~~-g~Y~g~~FhRVi~~f~iQgGd~---~~~g~gg~si~--------g~~~~d 111 (196)
T 2b71_A 44 YTNLGDFEVELYWYHSPKTCLNFYTLCEM-GFYDNTIFHRVIPNFVIQGGDP---TGTGKGGKSIY--------GEYFED 111 (196)
T ss_dssp EETTEEEEEEECTTTSHHHHHHHHHHHHT-TTTTTEEEEEEETTTEEEEEET---TSSSSCCCBTT--------BSCBCC
T ss_pred EeCCCCEEEEEeCCCCcHHHHHHHHHhhc-CCcCCCEEEEEeCCcEEEcCCC---CCCCCCCCccC--------CCcccc
Confidence 34569999999999999999999999999 9999999999999999999997 56777888876 456788
Q ss_pred Cc-ccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCCCCCCCCCCCcEEEEEEcCHHHHHHHHcCCCCCCch
Q 021845 172 NA-FLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPGPCPQLDNKNIVFGTVLQGLDVVAAIASIPTYKPSE 250 (306)
Q Consensus 172 e~-~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~~~p~LDg~~tVFGrVv~GmdVl~kI~~~~t~~~~~ 250 (306)
|. ..++|+++|+||||+. +||+++|||||++++ .+|||++|+|||||++|||||++|++++++.
T Consensus 112 E~~~~l~h~~~G~lsMAn~----------gpns~gSQFFIt~~~--~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~--- 176 (196)
T 2b71_A 112 EINKELKHTGAGILSMSNN----------GPNTNSSQFFITLAP--LPHLDGKHTIFARVSKNMTCIENIASVQTTA--- 176 (196)
T ss_dssp CCCTTCCCCSTTEEEECCS----------STTCBSSCEEEESSC--CGGGTTTSCEEEEEEECHHHHHHHHTSCBCT---
T ss_pred cccCCcCcCCCeEEEEccC----------CCCCcccEEEEECCC--CCccCCCEeEEEEEecCHHHHHHHHhCCcCC---
Confidence 84 5789999999999987 799999999999998 9999999999999999999999999999874
Q ss_pred hhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEecc
Q 021845 251 RIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGELKL 291 (306)
Q Consensus 251 ~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l~~ 291 (306)
.++|.++|+|.+|+++.+
T Consensus 177 -----------------------~~~P~~~i~I~~~~i~~d 194 (196)
T 2b71_A 177 -----------------------TNKPIFDLKILRTSTAVN 194 (196)
T ss_dssp -----------------------TCCBSSCCEEEEEEC---
T ss_pred -----------------------CCCCCCCeEEEEEEEecC
Confidence 589999999999999986
No 27
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=6.4e-46 Score=323.68 Aligned_cols=148 Identities=26% Similarity=0.380 Sum_probs=135.7
Q ss_pred CccceeEEEEecCCCCchHHHHHHHHhccCccccCceeEeecCCeEEEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCCC
Q 021845 92 PVPLGRLIIGLYGHLAPITVSNFKAMCSSRSLYRNTLVHKIFPGQFFLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLRP 171 (306)
Q Consensus 92 ~t~~GrIvIeL~~d~aP~tv~NF~~L~~~~~~Y~gt~FhRVi~~f~iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~d 171 (306)
+|++|+|+||||.+.||+||+||++||+. +||+|+.||||+++|||||||+ .++|.+|.+++ +..|++
T Consensus 27 ~t~~G~i~ieL~~~~aP~t~~NF~~L~~~-g~Y~g~~FhRvi~~f~iQgGd~---~~~g~gg~si~--------g~~~~d 94 (176)
T 2a2n_A 27 HTSMGDIHTKLFPVECPKTVENFCVHSRN-GYYNGHTFHRIIKGFMIQTGDP---TGTGMGGESIW--------GGEFED 94 (176)
T ss_dssp EETTEEEEEEECTTTCHHHHHHHHHHHHT-TTTTTCBCCEEETTTEEEECCT---TSSSSCCCCTT--------SSCBCC
T ss_pred EecCccEEEEEeCCCChHHHHHHHHHhhc-CccCCCEEEEEECCcEEEccCC---CCCCCCCCccc--------CCcccc
Confidence 56789999999999999999999999999 9999999999999999999997 56777888776 466888
Q ss_pred Ccc-cccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCCCCCCCCCCCcEEEEEEcCHHHHHHHHcCCCCCCch
Q 021845 172 NAF-LLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPGPCPQLDNKNIVFGTVLQGLDVVAAIASIPTYKPSE 250 (306)
Q Consensus 172 e~~-~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~~~p~LDg~~tVFGrVv~GmdVl~kI~~~~t~~~~~ 250 (306)
|.+ .++|+++|+|||||. +||+++|||||++.+ ++|||++|+|||||++|||||++|++++++.
T Consensus 95 E~~~~l~h~~~G~lsmA~~----------gp~s~gSQFFIt~~~--~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~--- 159 (176)
T 2a2n_A 95 EFHSTLRHDRPYTLSMANA----------GSNTNGSQFFITVVP--TPWLDNKHTVFGRVTKGMEVVQRISNVKVNP--- 159 (176)
T ss_dssp CCCTTCCSCSSSEEEECCS----------STTCBCSCEEEESSC--CGGGTTTSCEEEEEEECHHHHHHHHTSCBCT---
T ss_pred ccccccccCCceEEEEEeC----------CCCCcccEEEEECCC--CCccCCCeeEEEEEeCCHHHHHHHHcCCccC---
Confidence 887 699999999999997 799999999999998 9999999999999999999999999999872
Q ss_pred hhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeE
Q 021845 251 RIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGE 288 (306)
Q Consensus 251 ~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~ 288 (306)
..++|.++|+|.+|.+
T Consensus 160 ----------------------~~~~P~~~v~I~~v~v 175 (176)
T 2a2n_A 160 ----------------------KTDKPYEDVSIINITV 175 (176)
T ss_dssp ----------------------TTCCBSSCCBEEEEEE
T ss_pred ----------------------CCCccCCCeEEEEEEE
Confidence 0489999999999975
No 28
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=1.9e-45 Score=352.37 Aligned_cols=163 Identities=28% Similarity=0.559 Sum_probs=151.0
Q ss_pred CceEEEEEEeCCccCCCCCCCCCcCCCCccceeEEEEecCCCCchHHHHHHHHhcc--------C--ccccCceeEeecC
Q 021845 65 TDSIFMDFSLCPTFFRPEGTDPTLCSSPVPLGRLIIGLYGHLAPITVSNFKAMCSS--------R--SLYRNTLVHKIFP 134 (306)
Q Consensus 65 ~~~v~~di~i~~~~~~~~~~~~~~~~~~t~~GrIvIeL~~d~aP~tv~NF~~L~~~--------~--~~Y~gt~FhRVi~ 134 (306)
+++||||++| ++++.|+|+||||.+.||+||+||++||++ + .+|+|+.||||++
T Consensus 15 ~~~v~~~~~~----------------~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~ 78 (370)
T 1ihg_A 15 NPRVFFDVDI----------------GGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIK 78 (370)
T ss_dssp SCEEEEEEEE----------------TTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEET
T ss_pred CCeEEEEEEE----------------CCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEEC
Confidence 8999999999 899999999999999999999999999996 2 2799999999999
Q ss_pred CeEEEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCCCCcccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCC
Q 021845 135 GQFFLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLRPNAFLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGP 214 (306)
Q Consensus 135 ~f~iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~de~~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~ 214 (306)
||||||||+ ..++|.+|.+++ +..|++|++.++|+++|+|||||. +|||||||||||+.+
T Consensus 79 ~f~~q~Gd~--~~~~g~g~~~~~--------~~~~~~e~~~~~~~~~g~l~ma~~----------~~~~~~sqffi~~~~ 138 (370)
T 1ihg_A 79 KFMIQGGDF--SNQNGTGGESIY--------GEKFEDENFHYKHDKEGLLSMANA----------GSNTNGSQFFITTVP 138 (370)
T ss_dssp TTEEEECCT--TTSSSSCCCBTT--------BSCBCCCCCCBCCCSTTEEEECCS----------STTCBCSCEEEESSC
T ss_pred CcEEECCCC--CCCCCCCCCCCC--------CCCcCCCcCCcCCCCCeEEEEeeC----------CCCCCCceEEEeCCC
Confidence 999999997 457888998886 567999999999999999999998 799999999999998
Q ss_pred CCCCCCCCCCcEEEEEEcCHHHHHHHHcCCCCCCchhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEeccC
Q 021845 215 GPCPQLDNKNIVFGTVLQGLDVVAAIASIPTYKPSERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGELKLK 292 (306)
Q Consensus 215 ~~~p~LDg~~tVFGrVv~GmdVl~kI~~~~t~~~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l~~~ 292 (306)
++|||++|+|||+|++||+||++|++++++ .++|.++|+|.+||++...
T Consensus 139 --~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~---------------------------~~~P~~~v~I~~~g~l~~~ 187 (370)
T 1ihg_A 139 --TPHLDGKHVVFGQVIKGMGVAKILENVEVK---------------------------GEKPAKLCVIAECGELKEG 187 (370)
T ss_dssp --CGGGTTTSCEEEEEEECHHHHHHHHTSCEE---------------------------TTEESSCEEEEEEEEECTT
T ss_pred --CcccCCCceEEEEEecCHHHHHHHHcCCCC---------------------------CCccceeEEEEEEEEeccC
Confidence 999999999999999999999999999875 2799999999999999763
No 29
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=2.5e-45 Score=326.04 Aligned_cols=150 Identities=23% Similarity=0.378 Sum_probs=137.5
Q ss_pred ccceeEEEEecCCCCchHHHHHHHHhccCccccCceeEeecCCeEEEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCCCC
Q 021845 93 VPLGRLIIGLYGHLAPITVSNFKAMCSSRSLYRNTLVHKIFPGQFFLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLRPN 172 (306)
Q Consensus 93 t~~GrIvIeL~~d~aP~tv~NF~~L~~~~~~Y~gt~FhRVi~~f~iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~de 172 (306)
|++|+|+||||.+.||+||+||++||+. +||+|+.||||+++||||+||+ .+++.+|.+++ +..|++|
T Consensus 18 T~~G~I~ieL~~d~aP~tv~NF~~L~~~-g~Ydg~~FhRVi~~F~iQgGd~---~~~g~gg~si~--------g~~f~dE 85 (203)
T 2k7n_A 18 TSMGIIVLELYWKHAPKTCKNFAELARR-GYYNGTKFHRIIKDFMIQGGDP---TGTGRGGASIY--------GKQFEDE 85 (203)
T ss_dssp ESSCEEEEEECTTTCTTHHHHHHHHHHH-TCGGGCEEEEEETTTEEEEECS---SSSSSCCCTTS--------CSCBCCC
T ss_pred eCCCcEEEEEccCCCcHHHHHHHHHHhc-CccCCCEEEEEeCCcEEEcCCC---CCCCCCCCccC--------CCccccc
Confidence 3569999999999999999999999999 9999999999999999999997 56777888776 4568888
Q ss_pred c-ccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCCCCCCCCCCCcEEEEEEcCHHHHHHHHcCCCCCCchh
Q 021845 173 A-FLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPGPCPQLDNKNIVFGTVLQGLDVVAAIASIPTYKPSER 251 (306)
Q Consensus 173 ~-~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~~~p~LDg~~tVFGrVv~GmdVl~kI~~~~t~~~~~~ 251 (306)
. ..++|+++|+|+|||. +||+++|||||++.+ ++|||++|+|||||++|||||++|+++++++
T Consensus 86 ~~~~l~h~~~G~lsMAn~----------gpnsngSQFFIt~~~--~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~---- 149 (203)
T 2k7n_A 86 LHPDLKFTGAGILAMANA----------GPDTNGSQFFVTLAP--TQWLDGKHTIFGRVCQGIGMVNRVGMVETNS---- 149 (203)
T ss_dssp CCCSSCCCSSCEEEEEES----------STTCEEEEEEEESSC--CCSSTTTSCEEEEEESCHHHHHHHHSCCEEE----
T ss_pred ccccccCCCCeEEEEeeC----------CCCCcccEEEEEcCC--CCccCCCeeEEEEEEcCHHHHHHHHcCCcCC----
Confidence 7 4799998999999997 799999999999998 9999999999999999999999999998863
Q ss_pred hhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEeccC
Q 021845 252 IQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGELKLK 292 (306)
Q Consensus 252 ~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l~~~ 292 (306)
.++|.++|+|.+|++++..
T Consensus 150 ----------------------~~~P~~~V~I~~~~v~~~~ 168 (203)
T 2k7n_A 150 ----------------------QDRPVDDVKIIKAYPSGGG 168 (203)
T ss_dssp ----------------------TTEECCCCBEEEEEECCCC
T ss_pred ----------------------CCCcCCCeEEEEEEEEecC
Confidence 4799999999999999885
No 30
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=1.2e-45 Score=325.68 Aligned_cols=146 Identities=24% Similarity=0.413 Sum_probs=131.3
Q ss_pred CccceeEEEEecCCCCchHHHHHHHHhcc--------------CccccCceeEeecCCeEEEcCCCCCcCCCCCCCccCC
Q 021845 92 PVPLGRLIIGLYGHLAPITVSNFKAMCSS--------------RSLYRNTLVHKIFPGQFFLAGRQGLSRRDSKLGELHP 157 (306)
Q Consensus 92 ~t~~GrIvIeL~~d~aP~tv~NF~~L~~~--------------~~~Y~gt~FhRVi~~f~iq~Gd~~~~~~~g~~g~s~~ 157 (306)
.|+.|+|+||||.+.||+||+||++||++ .++|+|+.||||+++|||||||+ .++|.+|.
T Consensus 29 ~t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~---~g~G~gg~--- 102 (191)
T 1w74_A 29 HTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDP---TGTGRGGP--- 102 (191)
T ss_dssp EETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCT---TSSSSCCS---
T ss_pred EecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCC---CCCCCCCC---
Confidence 56789999999999999999999999931 27999999999999999999997 55555552
Q ss_pred CCCCCCCCCCCCCCC-cccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCCCCCCCCCCCcEEEEEEc--CH
Q 021845 158 PLDFLPPNTDTLRPN-AFLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPGPCPQLDNKNIVFGTVLQ--GL 234 (306)
Q Consensus 158 ~~~~~~~~g~~~~de-~~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~~~p~LDg~~tVFGrVv~--Gm 234 (306)
+..|+|| ++.++|+++|+|||||. +||+|+||||||+.+ ++|||++|+|||||++ ||
T Consensus 103 --------g~~f~dE~~~~l~h~~~G~lsMAn~----------gpntngSQFFIt~~~--~~~LDg~~tVFG~Vv~~~Gm 162 (191)
T 1w74_A 103 --------GYKFADEFHPELQFDKPYLLAMANA----------GPGTNGSQFFITVGK--TPHLNRRHTIFGEVIDAESQ 162 (191)
T ss_dssp --------SCCBCCCCCTTCCSCSSSEEEECCS----------STTCBSSCEEEESSC--CGGGTTTSCEEEEECSHHHH
T ss_pred --------CCccccccccCCCcCCCcEEEEeeC----------CCCCccceEEEEcCC--CcccCCCeeEEEEEEECCCH
Confidence 4668888 46899999999999998 799999999999998 9999999999999999 99
Q ss_pred HHHHHHHcCCCCCCchhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEe
Q 021845 235 DVVAAIASIPTYKPSERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGEL 289 (306)
Q Consensus 235 dVl~kI~~~~t~~~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l 289 (306)
|||++|++++++. +++|.++|+|.+|+++
T Consensus 163 dvv~~I~~~~t~~--------------------------~~~P~~~v~I~~~~i~ 191 (191)
T 1w74_A 163 RVVEAISKTATDG--------------------------NDRPTDPVVIESITIS 191 (191)
T ss_dssp HHHHHHHTSCBCT--------------------------TSCBSSCCEEEEEEEC
T ss_pred HHHHHHHcCCcCC--------------------------CCCcCCCeEEEEEEEC
Confidence 9999999999874 5899999999999985
No 31
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=2.7e-45 Score=322.01 Aligned_cols=148 Identities=26% Similarity=0.426 Sum_probs=134.0
Q ss_pred cceeEEEEecCCCCchHHHHHHHHhccCccccCceeEeecCCeEEEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCCCCc
Q 021845 94 PLGRLIIGLYGHLAPITVSNFKAMCSSRSLYRNTLVHKIFPGQFFLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLRPNA 173 (306)
Q Consensus 94 ~~GrIvIeL~~d~aP~tv~NF~~L~~~~~~Y~gt~FhRVi~~f~iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~de~ 173 (306)
++|+|+||||.+.||+||+||++||+. ++|+|+.||||+++|||||||+ .+++.+|.+++ +..|++|.
T Consensus 32 ~~G~I~ieL~~~~aP~tv~NF~~L~~~-g~Y~g~~FhRvi~~f~iQgGd~---~~~g~gg~si~--------g~~~~dE~ 99 (185)
T 2hq6_A 32 TAGDIDIELWSKEAPKACRNFIQLCLE-AYYDNTIFHRVVPGFIVQGGDP---TGTGSGGESIY--------GAPFKDEF 99 (185)
T ss_dssp TTEEEEEEEBTTTCHHHHHHHHHHHHT-TTTTTEECCEEETTTEEEECCT---TSSSSCCCCTT--------SSCBCCCC
T ss_pred CCccEEEEEeCCCCcHHHHHHHHHhhc-CccCCCEEEEEECCCEEEcCCC---CCCCCCCCccc--------CCcccccc
Confidence 459999999999999999999999999 9999999999999999999997 56777888776 45688887
Q ss_pred c-cccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCCCCCCCCCCCcEEEEEEcCHHHH--HHHHcCCCCCCch
Q 021845 174 F-LLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPGPCPQLDNKNIVFGTVLQGLDVV--AAIASIPTYKPSE 250 (306)
Q Consensus 174 ~-~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~~~p~LDg~~tVFGrVv~GmdVl--~kI~~~~t~~~~~ 250 (306)
. .++|+++|+|||||. ++|+++|||||++++ +++||++|+|||||+ ||+|+ ++|+++++++
T Consensus 100 ~~~l~h~~~G~lsMA~~----------g~~s~gSQFFIt~~~--~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~~--- 163 (185)
T 2hq6_A 100 HSRLRFNRRGLVAMANA----------GSHDNGSQFFFTLGR--ADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDD--- 163 (185)
T ss_dssp BTTBCSCSSSEEEECCS----------STTCBCSCEEEESSC--CGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBCT---
T ss_pred ccCcccCCCeEEEEccC----------CCCCccceEEEECCC--CCccCCCceEEEEEE-eCeeehhhHHhhCCcCC---
Confidence 5 689999999999998 799999999999998 999999999999999 88774 6888888864
Q ss_pred hhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEeccC
Q 021845 251 RIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGELKLK 292 (306)
Q Consensus 251 ~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l~~~ 292 (306)
+++|.++|+|.+|+++.++
T Consensus 164 -----------------------~~~P~~~v~I~~~~v~~~P 182 (185)
T 2hq6_A 164 -----------------------DERPHNPHKIKSCEVLFNP 182 (185)
T ss_dssp -----------------------TSCBSSCCEEEEEEEEECT
T ss_pred -----------------------CCCCCCCeEEEEEEEeCCC
Confidence 5899999999999999884
No 32
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=2.2e-44 Score=310.89 Aligned_cols=152 Identities=24% Similarity=0.375 Sum_probs=130.3
Q ss_pred CCccceeEEEEecCCCCchHHHHHHHHhccCccccCceeEeecCCeEEEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCC
Q 021845 91 SPVPLGRLIIGLYGHLAPITVSNFKAMCSSRSLYRNTLVHKIFPGQFFLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLR 170 (306)
Q Consensus 91 ~~t~~GrIvIeL~~d~aP~tv~NF~~L~~~~~~Y~gt~FhRVi~~f~iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~ 170 (306)
..|++|+|+||||.+.||+||+||++||+. ++|+|+.||||+++|||||||+ ..+. |.+++ +..|+
T Consensus 4 l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~-g~Y~g~~FhRvi~~f~iQgGd~--~~~~---g~~~~--------g~~~~ 69 (164)
T 1lop_A 4 FHTNHGDIVIKTFDDKAPETVKNFLDYCRE-GFYNNTIFHRVINGFMIQGGGF--EPGM---KQKAT--------KEPIK 69 (164)
T ss_dssp EEETTEEEEEEECTTTSHHHHHHHHHHHHT-TTTTTEECCEEETTTEEEESSE--ETTT---EECCC--------CCCBC
T ss_pred EEeCCCCEEEEEeCCCCcHHHHHHHHHHhc-CCCCCCEEEEEeCCceEecCCc--ccCC---CcCCC--------CCccc
Confidence 478899999999999999999999999999 9999999999999999999997 2222 33333 46688
Q ss_pred CCccc-ccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCCCCCCCCCC--------CcEEEEEEcCHHHHHHHH
Q 021845 171 PNAFL-LKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPGPCPQLDNK--------NIVFGTVLQGLDVVAAIA 241 (306)
Q Consensus 171 de~~~-l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~~~p~LDg~--------~tVFGrVv~GmdVl~kI~ 241 (306)
+|... ++| ++|+|||||.+ +|||++|||||++.+ .+|||++ |+|||||++|||||++|+
T Consensus 70 dE~~~~l~~-~~G~lsmA~~~---------~p~s~gSQFfI~~~~--~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~ 137 (164)
T 1lop_A 70 NEANNGLKN-TRGTLAMARTQ---------APHSATAQFFINVVD--NDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIK 137 (164)
T ss_dssp CCCCSSCCC-CTTEEEECCCS---------STTCBCSCEEEESSC--CGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHH
T ss_pred ccccccccc-CccEEEEeecC---------CCCCccceEEEEcCC--ccccCCccccccCCceEEEEEEecCHHHHHHHH
Confidence 88764 666 58999999863 799999999999998 9999998 999999999999999999
Q ss_pred cCCCCCCchhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEec
Q 021845 242 SIPTYKPSERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGELK 290 (306)
Q Consensus 242 ~~~t~~~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l~ 290 (306)
+++++.. |+ .+++|.++|+|.+|++++
T Consensus 138 ~~~t~~~--------------~~--------~~~~P~~~v~I~~~~v~~ 164 (164)
T 1lop_A 138 GVATGRS--------------GM--------HQDVPKEDVIIESVTVSE 164 (164)
T ss_dssp TSCEEEE--------------TT--------EEEEESSCCEEEEEEECC
T ss_pred hCCcCCc--------------cc--------cCCCcCCCeEEEEEEEeC
Confidence 9988620 11 137999999999999874
No 33
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=8.7e-44 Score=307.68 Aligned_cols=151 Identities=26% Similarity=0.421 Sum_probs=127.5
Q ss_pred ccceeEEEEecCCCCchHHHHHHHHhccCccccCceeEeecCCeEEEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCCCC
Q 021845 93 VPLGRLIIGLYGHLAPITVSNFKAMCSSRSLYRNTLVHKIFPGQFFLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLRPN 172 (306)
Q Consensus 93 t~~GrIvIeL~~d~aP~tv~NF~~L~~~~~~Y~gt~FhRVi~~f~iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~de 172 (306)
|++|+|+||||.+.||+||+||++||+. +||+|+.||||+++|||||||+ ...+ +...+ +..|.+|
T Consensus 11 t~~G~i~ieL~~~~aP~t~~NF~~L~~~-g~Y~g~~FhRvi~~f~iQgGd~---~~~~--~~~~~--------g~~~~dE 76 (166)
T 1v9t_A 11 TSAGNIELELDKQKAPVSVQNFVDYVNS-GFYNNTTFHRVIPGFMIQGGGF---TEQM--QQKKP--------NPPIKNE 76 (166)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHT-TTTTTCBEEEEETTTEEEESSB---CTTC--CBCCC--------CCCBCCC
T ss_pred eCCccEEEEEcCCCCcHHHHHHHHHhcc-CCCCCCEEEEEECCcEEEcCCc---CcCC--CCCCC--------CCccccc
Confidence 4569999999999999999999999999 8999999999999999999997 2221 11111 4568888
Q ss_pred cccccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCCCCCCCCCC-----CcEEEEEEcCHHHHHHHHcCCCCC
Q 021845 173 AFLLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPGPCPQLDNK-----NIVFGTVLQGLDVVAAIASIPTYK 247 (306)
Q Consensus 173 ~~~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~~~p~LDg~-----~tVFGrVv~GmdVl~kI~~~~t~~ 247 (306)
.....|+++|+|||||.+ +|||++|||||++.+ .+|||++ |+|||||++|||||++|++++++.
T Consensus 77 ~~~~l~~~~G~lsmA~~~---------~p~t~gSQFfI~~~~--~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~~~ 145 (166)
T 1v9t_A 77 ADNGLRNTRGTIAMARTA---------DKDSATSQFFINVAD--NAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHD 145 (166)
T ss_dssp GGGSCCCCTTEEEECCCS---------STTCBCSCEEEESSC--CGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCEEE
T ss_pred ccccccCCceEEEEeecC---------CCCCccceEEEEeCC--ccccCCccCcCCeeEEEEEecCHHHHHHHHhCCCCC
Confidence 876556668999999974 699999999999998 9999998 999999999999999999998863
Q ss_pred CchhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEec
Q 021845 248 PSERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGELK 290 (306)
Q Consensus 248 ~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l~ 290 (306)
. | ...++|.++|+|.+|++++
T Consensus 146 ~--------------~--------~~~~~P~~~v~I~~~~v~~ 166 (166)
T 1v9t_A 146 V--------------G--------PYQNVPSKPVVILSATVLP 166 (166)
T ss_dssp E--------------T--------TEEEEESSCCBEEEEEECC
T ss_pred C--------------C--------ccCCCcCCCeEEEEEEEeC
Confidence 0 0 0137899999999999874
No 34
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=7.2e-44 Score=322.82 Aligned_cols=163 Identities=20% Similarity=0.304 Sum_probs=134.4
Q ss_pred ccceeEEEEecCCCCchHHHHHHHHhccCccccCceeEeecCCeEEEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCCCC
Q 021845 93 VPLGRLIIGLYGHLAPITVSNFKAMCSSRSLYRNTLVHKIFPGQFFLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLRPN 172 (306)
Q Consensus 93 t~~GrIvIeL~~d~aP~tv~NF~~L~~~~~~Y~gt~FhRVi~~f~iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~de 172 (306)
|++|+|+||||.+.||+||+||++||+. +||+|+.||||+++|||||||+ .++|.+|.+++. .+..|++|
T Consensus 28 T~~G~I~ieL~~d~aP~tv~NF~~L~~~-g~Ydgt~FhRVi~~FmiQgGdp---~~~G~Gg~si~~------~g~~f~dE 97 (232)
T 3bkp_A 28 TSLGDLDVELWARECPLACRNFVQLCLE-GYYVNTIFHRVVKDFIVQGGDP---TGTGRGGADTTF------DGKPFDVE 97 (232)
T ss_dssp ETTEEEEEEEBTTTCHHHHHHHHHHHHH-TTTTTCBEEEEETTTEEEECCT---TSSSSCCCCCTT------TTCCBCCC
T ss_pred ECCCcEEEEEcCCCCcHHHHHHHHHhhc-CccCCCEEEEEeCCCEEEcCCC---CCCCCCCCcccc------CCCccCCc
Confidence 3469999999999999999999999999 9999999999999999999997 567778887762 14568888
Q ss_pred cc-cccCCCceEEEEecCCCCC----CCCCCCCCCCccceEEEEcCCCCCCCCCCCCcEEEEEEcCHHH--HHHHHcCCC
Q 021845 173 AF-LLKHSRGGVVSLCLSENDD----DPDVKLDPHYRNVEFLITTGPGPCPQLDNKNIVFGTVLQGLDV--VAAIASIPT 245 (306)
Q Consensus 173 ~~-~l~h~~~G~lsma~~~~~~----~~~~~~~p~t~gSqFfItl~~~~~p~LDg~~tVFGrVv~GmdV--l~kI~~~~t 245 (306)
.. .++|+++|+|||||.+..+ ++..+..+++++||||||+++ ++|||++|+|||||+ ||+| |++|+++++
T Consensus 98 ~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~--~p~LDg~~tVFG~Vv-g~~v~~v~kI~~~~t 174 (232)
T 3bkp_A 98 THPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLAR--ADVLNNAYTLFGKVT-GHTLYNLMKFNDLEV 174 (232)
T ss_dssp CCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSC--CGGGTTTSCEEEEEC-GGGHHHHHHHTTSCB
T ss_pred cccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCC--CcccCCCccEEEEEE-eCchHHHHHHHcCCc
Confidence 75 6899999999999984100 000000017999999999998 999999999999999 7765 899999998
Q ss_pred CCCchhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEeccCCC
Q 021845 246 YKPSERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGELKLKPN 294 (306)
Q Consensus 246 ~~~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l~~~~~ 294 (306)
+. +++|.++|+|.+|+++.++..
T Consensus 175 ~~--------------------------~~~P~~~i~I~~~~vl~dPf~ 197 (232)
T 3bkp_A 175 GK--------------------------EDRPMTPPFIKSVDVLWNPFE 197 (232)
T ss_dssp CG--------------------------GGCBSSCCBEEEEEEEECCCT
T ss_pred CC--------------------------CCCcCCCeEEEEEEEEcCChh
Confidence 74 489999999999999998543
No 35
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=1.9e-43 Score=305.78 Aligned_cols=151 Identities=23% Similarity=0.306 Sum_probs=127.0
Q ss_pred CCccceeEEEEecCCCCchHHHHHHHHhccCccccCceeEeecCCeEEEcCCCCCcCCCCCCCccCCCCCCCCCCCCCCC
Q 021845 91 SPVPLGRLIIGLYGHLAPITVSNFKAMCSSRSLYRNTLVHKIFPGQFFLAGRQGLSRRDSKLGELHPPLDFLPPNTDTLR 170 (306)
Q Consensus 91 ~~t~~GrIvIeL~~d~aP~tv~NF~~L~~~~~~Y~gt~FhRVi~~f~iq~Gd~~~~~~~g~~g~s~~~~~~~~~~g~~~~ 170 (306)
.+|++|+|+||||.+.||+||+||++||++ +||+|+.||||+++|||||||+ .... +...+ +..+.
T Consensus 8 l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~-g~Y~g~~FhRvi~~f~iQgGd~--~~~~---~~~~~--------~~~~~ 73 (167)
T 3s6m_A 8 LHTNHGVIKLELDEAKAPKTVENFLNYVKK-GHYDGTIFHRVINGFMIQGGGF--EPGL---KQKPT--------DAPIA 73 (167)
T ss_dssp EEETTEEEEEEECTTTCHHHHHHHHHHHHH-TTTTTEECCEEETTTEEEESSE--ETTT---EECCC--------CCCBC
T ss_pred EEeCCceEEEEEeCCCCcHHHHHHHHHhhh-cccCCCEeEEecCCcEEEeccc--cCCC---CCCCC--------CCccC
Confidence 467889999999999999999999999999 9999999999999999999997 2221 11111 35577
Q ss_pred CCcc-cccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCCCCCCCCCCC--------CcEEEEEEcCHHHHHHHH
Q 021845 171 PNAF-LLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGPGPCPQLDNK--------NIVFGTVLQGLDVVAAIA 241 (306)
Q Consensus 171 de~~-~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~~~~p~LDg~--------~tVFGrVv~GmdVl~kI~ 241 (306)
+|.. .++| ++|+|||||.+ +|||++|||||++.+ .+|||++ |+|||||++|||||++|+
T Consensus 74 ~E~~~~l~~-~~G~lsmA~~~---------~p~t~gSQFfI~~~~--~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~ 141 (167)
T 3s6m_A 74 NEANNGLKN-DTYTIAMARTN---------DPHSATAQFFINVND--NEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIK 141 (167)
T ss_dssp CCGGGCCCC-CTTEEEECCCS---------STTCBCSCEEEESSC--CGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHT
T ss_pred CcccccccC-CccEEEEecCC---------CCCCccceEEEEcCC--chhcCCcccccCCCCceEEEEEEcCHHHHHHHH
Confidence 7754 4555 68999999953 799999999999998 8999998 999999999999999999
Q ss_pred cCCCCCCchhhhhhhhhHhhhcccccccccccCCCCCCcEEEeeeeEe
Q 021845 242 SIPTYKPSERIQKYNELAAFIGDKRADTARAIWNRPLKTVYISDCGEL 289 (306)
Q Consensus 242 ~~~t~~~~~~~~~~~~~a~~~gd~~a~~~~~~~~~P~~~V~I~~cg~l 289 (306)
+++++.. | ...++|+++|+|.+|.+|
T Consensus 142 ~~~t~~~--------------~--------~~~~~P~~~v~I~~~~il 167 (167)
T 3s6m_A 142 AVKTGSK--------------G--------FHQDVPNDDVVIEKAVVV 167 (167)
T ss_dssp TSCBBC-------------------------CBTCBSSCCEEEEEEEC
T ss_pred cCCcCCC--------------c--------ccCCCcCCCeEEEEEEEC
Confidence 9999741 0 013899999999999886
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=3e-37 Score=294.97 Aligned_cols=137 Identities=18% Similarity=0.200 Sum_probs=111.6
Q ss_pred ccceeEEEEecCCCCchHHHHHHHHhccCccccCceeEeecCCeEEEcCCCCCcCCCCCCC--------ccCCCC-----
Q 021845 93 VPLGRLIIGLYGHLAPITVSNFKAMCSSRSLYRNTLVHKIFPGQFFLAGRQGLSRRDSKLG--------ELHPPL----- 159 (306)
Q Consensus 93 t~~GrIvIeL~~d~aP~tv~NF~~L~~~~~~Y~gt~FhRVi~~f~iq~Gd~~~~~~~g~~g--------~s~~~~----- 159 (306)
++.|+|+|+||.+.||+||+||++||+. +||+|+.|||| +||||||||+ .+++.++ ..++..
T Consensus 185 ~~~G~I~IeL~~d~AP~Tv~NFl~L~~~-GfYdGt~FHRV-~gFmIQgGDp---~g~G~G~~~~~~g~~~~iP~E~~~~G 259 (369)
T 3rfy_A 185 IEDCVFRIVLDGYNAPVTAGNFVDLVER-HFYDGMEIQRS-DGFVVQTGDP---EGPAEGFIDPSTEKTRTVPLEIMVTG 259 (369)
T ss_dssp CSEEEEEEEEETTTCHHHHHHHHHHHHT-TTTTTEECEEE-EEEEECCCCC---CCCCSCCCSCCCCCCCSSSSSSCSSS
T ss_pred ccceEEEEEEeCCCCcHHHHHHHHHhhc-CCcCCCeeeee-CCeeEecCCC---CCCCCCccCcccCcCcccCccccccC
Confidence 4699999999999999999999999999 99999999999 9999999998 3444331 111100
Q ss_pred CCCCCCCCCCCCCcc-----cccCCCceEEEEecCCCCCCCCCCCCCCCccceEEEEcCC-----CCCCCCCCCCcEEEE
Q 021845 160 DFLPPNTDTLRPNAF-----LLKHSRGGVVSLCLSENDDDPDVKLDPHYRNVEFLITTGP-----GPCPQLDNKNIVFGT 229 (306)
Q Consensus 160 ~~~~~~g~~~~de~~-----~l~h~~~G~lsma~~~~~~~~~~~~~p~t~gSqFfItl~~-----~~~p~LDg~~tVFGr 229 (306)
...+..+..|++|++ .++|+++|+|||||.++ +|||++||||||+++ .+.+|||++|+||||
T Consensus 260 ~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~--------gPnSngSQFFItl~d~~L~~~~~~~LDgkytVFG~ 331 (369)
T 3rfy_A 260 EKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEF--------ENDSGSSQVFWLLKESELTPSNSNILDGRYAVFGY 331 (369)
T ss_dssp SCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCC--------CCCCSSCCCCCCCEEEEECSCCCSSSCSCEEEEEE
T ss_pred CCCCcCCCccccccccccccccccCCCceEEEeecCC--------CCCCccceEEEEecccccCCCCCcccCCCeeEEEE
Confidence 012233566777754 68899999999999732 799999999999942 248999999999999
Q ss_pred EEcCHHHHHHHHc
Q 021845 230 VLQGLDVVAAIAS 242 (306)
Q Consensus 230 Vv~GmdVl~kI~~ 242 (306)
|++|||||++|++
T Consensus 332 VveGmdVVdkI~~ 344 (369)
T 3rfy_A 332 VTDNEDFLADLKV 344 (369)
T ss_dssp EEESTTGGGGCCT
T ss_pred EecCHHHHHHHhC
Confidence 9999999999988
No 37
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=90.55 E-value=3.1 Score=35.61 Aligned_cols=37 Identities=16% Similarity=0.097 Sum_probs=26.7
Q ss_pred ce-eEEEEecCCCCchHHHHHHHHhccCccccCceeEeecCC
Q 021845 95 LG-RLIIGLYGHLAPITVSNFKAMCSSRSLYRNTLVHKIFPG 135 (306)
Q Consensus 95 ~G-rIvIeL~~d~aP~tv~NF~~L~~~~~~Y~gt~FhRVi~~ 135 (306)
.| .++.+|..+.||+||+.|+++- =|.+..+|-..-+
T Consensus 31 ~g~~~~A~Lldd~APkTcaA~~~~L----P~~~~viHarwSG 68 (188)
T 3kop_A 31 RGVTCKALLLDDVAPRTSKAVWDAL----PQSSQVFHGKYAR 68 (188)
T ss_dssp TTEEEEEEECTTTSHHHHHHHHHHC----CEEEECEECSSSS
T ss_pred CCeEEEEEEccccChHHHHHHHHhC----CCCcceEEEEEec
Confidence 35 4899999999999999999963 3445555544433
No 38
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=31.47 E-value=42 Score=27.60 Aligned_cols=23 Identities=26% Similarity=0.299 Sum_probs=21.0
Q ss_pred eeEEEEecCCCCchHHHHHHHHh
Q 021845 96 GRLIIGLYGHLAPITVSNFKAMC 118 (306)
Q Consensus 96 GrIvIeL~~d~aP~tv~NF~~L~ 118 (306)
..++++|+.+.||+||+.|+++-
T Consensus 39 ~~~~a~L~D~~aP~Ta~~f~~~L 61 (153)
T 2nnz_A 39 AECEVELYEEWAPETVRAIADAL 61 (153)
T ss_dssp EEEEECCCTTSCHHHHHHHHHTC
T ss_pred EEEEEEEcCCCCHHHHHHHHHhC
Confidence 67999999999999999999864
Done!