Query 021846
Match_columns 306
No_of_seqs 329 out of 1704
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 06:07:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021846.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021846hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1485 Mitochondrial Fe2+ tra 100.0 1E-46 2.3E-51 356.6 24.3 295 11-305 13-323 (412)
2 COG0053 MMT1 Predicted Co/Zn/C 100.0 2.4E-37 5.3E-42 289.7 27.4 201 99-305 8-214 (304)
3 PRK09509 fieF ferrous iron eff 100.0 3E-35 6.6E-40 275.4 28.3 197 101-303 8-209 (299)
4 PRK03557 zinc transporter ZitB 100.0 1.9E-35 4.2E-40 278.3 26.6 196 103-304 18-217 (312)
5 COG1230 CzcD Co/Zn/Cd efflux s 100.0 5E-35 1.1E-39 270.1 25.5 199 101-305 19-220 (296)
6 TIGR01297 CDF cation diffusion 100.0 5.5E-31 1.2E-35 242.0 22.8 183 116-304 2-189 (268)
7 PF01545 Cation_efflux: Cation 100.0 1.3E-29 2.8E-34 234.4 3.9 193 106-303 1-201 (284)
8 KOG1484 Putative Zn2+ transpor 99.9 6.1E-23 1.3E-27 189.6 18.1 198 101-304 32-271 (354)
9 KOG1482 Zn2+ transporter [Inor 99.9 6.7E-22 1.5E-26 185.1 12.7 197 102-304 71-291 (379)
10 COG3965 Predicted Co/Zn/Cd cat 99.8 6.5E-19 1.4E-23 157.6 19.0 199 98-301 14-225 (314)
11 KOG1483 Zn2+ transporter ZNT1 99.8 1E-20 2.2E-25 177.9 6.0 195 106-305 11-297 (404)
12 KOG2802 Membrane protein HUEL 99.7 1.3E-17 2.7E-22 155.6 8.5 179 100-286 203-405 (503)
13 COG0053 MMT1 Predicted Co/Zn/C 98.6 7.5E-07 1.6E-11 84.0 12.3 96 102-205 119-214 (304)
14 TIGR01297 CDF cation diffusion 98.4 3.9E-06 8.4E-11 77.0 11.8 92 104-203 98-189 (268)
15 PRK09509 fieF ferrous iron eff 98.4 6.8E-06 1.5E-10 77.2 13.0 92 104-203 119-210 (299)
16 PRK03557 zinc transporter ZitB 97.7 0.00043 9.4E-09 65.5 11.1 90 106-203 128-217 (312)
17 KOG1485 Mitochondrial Fe2+ tra 97.2 0.0012 2.5E-08 64.1 7.7 95 104-206 231-325 (412)
18 PF01545 Cation_efflux: Cation 95.9 0.0081 1.7E-07 55.4 4.1 91 106-203 109-202 (284)
19 COG1230 CzcD Co/Zn/Cd efflux s 93.2 0.6 1.3E-05 44.0 9.2 91 104-203 129-219 (296)
20 PF07444 Ycf66_N: Ycf66 protei 91.6 2.5 5.4E-05 32.3 9.1 47 247-293 33-82 (84)
21 COG4956 Integral membrane prot 89.9 15 0.00031 35.0 14.3 52 250-301 79-139 (356)
22 COG1183 PssA Phosphatidylserin 82.7 19 0.00042 32.7 10.9 82 214-297 37-118 (234)
23 TIGR00473 pssA CDP-diacylglyce 66.8 78 0.0017 26.7 12.4 81 214-297 22-102 (151)
24 PF09685 Tic20: Tic20-like pro 53.2 1E+02 0.0022 23.6 8.3 24 143-166 81-104 (109)
25 COG4858 Uncharacterized membra 51.5 1.8E+02 0.0038 25.9 11.3 100 184-287 103-208 (226)
26 TIGR00816 tdt C4-dicarboxylate 50.6 2.2E+02 0.0047 26.7 11.3 17 270-286 101-117 (320)
27 PF11712 Vma12: Endoplasmic re 48.8 52 0.0011 27.3 5.8 23 107-129 78-100 (142)
28 PF11654 DUF2665: Protein of u 46.0 19 0.0004 24.5 2.1 19 269-287 4-22 (47)
29 KOG1482 Zn2+ transporter [Inor 44.9 89 0.0019 30.4 7.3 71 130-207 224-294 (379)
30 PRK10764 potassium-tellurite e 44.9 2.7E+02 0.0059 26.2 11.8 23 178-200 13-35 (324)
31 PHA02975 hypothetical protein; 43.2 1.3E+02 0.0028 22.0 6.3 62 173-234 3-66 (69)
32 KOG1484 Putative Zn2+ transpor 42.2 3.3E+02 0.0071 26.3 12.6 86 215-300 37-130 (354)
33 COG0581 PstA ABC-type phosphat 41.1 3.1E+02 0.0068 25.8 10.5 77 221-297 86-168 (292)
34 PF02038 ATP1G1_PLM_MAT8: ATP1 39.8 66 0.0014 22.1 4.1 29 162-191 5-33 (50)
35 PLN02601 beta-carotene hydroxy 37.5 2E+02 0.0044 26.9 8.1 17 247-263 178-194 (303)
36 PRK14856 nhaA pH-dependent sod 35.6 4.7E+02 0.01 26.2 11.9 144 113-281 25-179 (438)
37 PRK10263 DNA translocase FtsK; 32.5 8.3E+02 0.018 28.2 13.8 31 256-286 142-172 (1355)
38 PF07062 Clc-like: Clc-like; 27.2 4.6E+02 0.0099 23.5 11.6 46 103-148 104-152 (211)
39 COG4171 SapC ABC-type antimicr 24.7 5.5E+02 0.012 23.6 11.0 87 189-283 82-170 (296)
40 PRK09560 nhaA pH-dependent sod 23.4 7.2E+02 0.016 24.5 10.9 103 173-280 58-170 (389)
41 PF06570 DUF1129: Protein of u 23.2 5.1E+02 0.011 22.6 13.6 8 229-236 194-201 (206)
42 PF01970 TctA: Tripartite tric 22.8 7E+02 0.015 24.7 9.8 25 151-175 258-282 (419)
43 COG3965 Predicted Co/Zn/Cd cat 22.2 4.9E+02 0.011 24.5 7.8 14 270-283 120-133 (314)
44 PF06738 DUF1212: Protein of u 21.7 1.9E+02 0.0042 24.7 5.1 45 256-300 109-154 (193)
45 PF09877 DUF2104: Predicted me 21.0 1.4E+02 0.0031 23.4 3.5 20 167-186 78-97 (99)
46 PF04156 IncA: IncA protein; 20.4 5.3E+02 0.011 21.9 7.6 24 170-193 5-28 (191)
47 COG0651 HyfB Formate hydrogenl 20.1 9.1E+02 0.02 24.4 16.0 154 100-256 157-340 (504)
No 1
>KOG1485 consensus Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-46 Score=356.59 Aligned_cols=295 Identities=38% Similarity=0.536 Sum_probs=251.6
Q ss_pred ccccccccccccc----ccccccccccCCCcccccc----CCCCCccccccccCcccchhhchhhhHHHHhchhhhhhhh
Q 021846 11 EETSLLAQQGNVD----RSWRLNFDGFQVSPERTEK----KPPRGLHDCLGVLGPEDNVAEYYQQQVQMLEGFNEMDALA 82 (306)
Q Consensus 11 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~fy~~q~~~i~~~~e~~~~~ 82 (306)
+..+|++...+.+ .+|+.+++.|..+++.-.+ +.+.....+++...+.+++.+||..|.++.+.+.|..+.+
T Consensus 13 ~~~sl~~~~~~~~~l~~~~~~~~~~~f~~~~e~~~~~~r~~~~~~~~~~~~~~~~e~~~~e~~~~~~~~l~~~~~~~~~~ 92 (412)
T KOG1485|consen 13 SKSSLLSIDGNKPQLSIKSWSEKLDNFELISEQINSENRTCRRTKLHKSLRSPEKEDNVSEFYSSQKSLLQKFVEHSHTH 92 (412)
T ss_pred cccchhcccCCCCchhhhhHHHHHHHhccchhhhhcccccccccccccccccchhhhccchHHHHHHHHhcccccccccc
Confidence 5567777663333 4999999999986543221 1234444677777888888899999999999999999998
Q ss_pred hcCCCCCCCHHHH-HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 021846 83 ERGFVPGMTKEER-ENLARSETLAIRISNVANMVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNP 161 (306)
Q Consensus 83 ~~~~~~~~~~~~~-~~~~~~~r~al~isl~~Nl~l~i~kl~a~~~sgSlaLiAdaldsl~D~~s~~i~l~~~~~~~k~~~ 161 (306)
++|..+++.+++. +..+..++++.|+++++|++++++|+++|+.+||+|++||++||+.|+++++++|++.+.++|+++
T Consensus 93 ~~~~~~~~~~~e~~~~~~~~~~~~~~i~l~~Nigl~vaK~~as~~sgS~aIiAsavdSl~Dl~s~fvll~s~~~~~k~~~ 172 (412)
T KOG1485|consen 93 EHGFVSEALELEKLQILKNAERRAAWIGLAANIGLAVAKVVASYLSGSMAIIASAVDSLSDLVSGFVLLFSLRAAKKKPT 172 (412)
T ss_pred cCCCCccccchhhhhhhhcHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh
Confidence 8888766544333 344557789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcc-ccccchhh-----HHHHHHHHHHHHHHHHHHHHHHH
Q 021846 162 YQYPIGKKRMQPLGILVFASVMATLGLQIILESLRTLVSNEDQ-FNLTKEQE-----QWVVGIMLSVTLVKLLLVVYCRA 235 (306)
Q Consensus 162 ~~~P~G~~R~E~l~~li~s~~m~~~~~~ii~esi~~Li~~~~~-~~~~~~~~-----~~~i~i~~~s~vv~~~l~~~~~~ 235 (306)
++||+|++|+||+|.+.++.+|..+|++++++|++.+.++... .+.+++.. .|+++++++...+++.+++||++
T Consensus 173 ~~YP~G~~r~EtvG~i~~S~iMa~agv~ii~sSl~~i~~~~~~~~~~~~~q~~~~~a~~~i~i~is~~~vk~~l~~~c~~ 252 (412)
T KOG1485|consen 173 YEYPRGRGRVETVGLIAVSVIMAMAGVQIIWSSLRLIVGPHAIGHHHNPSQLIFINALWLIAIMISAKEVKLRLTLYCAI 252 (412)
T ss_pred hhCCCCCCcccchhHHHHHHHHHHHHHHHHHHhHHhhhcccccccccCchhhcccchhhhheehhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999872211 01212222 38899999999999999999998
Q ss_pred hCC-HHHHHHHHHHHHhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 021846 236 FTN-EIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIIVSQISNSLVFSCACVHLLVFMWGIEE 305 (306)
Q Consensus 236 ~~s-~~l~a~a~~~~~Dv~~n~~~i~~~~l~~~~~~~iDpi~aiiIa~~i~~~~~~~~~~~~~~l~~~~~~ 305 (306)
.++ ..++|.|+|||+|+++|.++++++.++.+++||+||+||+++|.|+++.|+++..+++.+|.+.-.+
T Consensus 253 ~~ns~iv~a~A~dHr~D~lTn~vaLva~~la~~~~~~lDP~gailVS~~ii~t~~~t~~~~i~~Lvg~~a~ 323 (412)
T KOG1485|consen 253 KTNSNIVRANAWDHRNDVLTNSVALVAASLAYYYNYWLDPIGAILVSTYIIYTGGRTGLENIKELVGRSAP 323 (412)
T ss_pred hcCcHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhhcccchhhhhhheehhhhhhHHHHHHHHHHhCCCCC
Confidence 765 9999999999999999999999999999998999999999999999999999999999999976444
No 2
>COG0053 MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-37 Score=289.73 Aligned_cols=201 Identities=24% Similarity=0.358 Sum_probs=186.5
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHH
Q 021846 99 ARSETLAIRISNVANMVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILV 178 (306)
Q Consensus 99 ~~~~r~al~isl~~Nl~l~i~kl~a~~~sgSlaLiAdaldsl~D~~s~~i~l~~~~~~~k~~~~~~P~G~~R~E~l~~li 178 (306)
.+..+++.+++++.|+++.+.|+++|+.+||.||+||++||+.|++++++.+++.+.++||+|++|||||+|+|++++++
T Consensus 8 ~~~~~~~~~~sl~~nl~l~~~K~~~g~~~gS~ALlADaihs~~D~~~si~~l~~l~~s~kp~d~~HpyGh~k~E~l~sl~ 87 (304)
T COG0053 8 LKLVRRAALISLAVNLALALLKLIAGILTGSVALLADAIHSLSDIVASLIVLIGLRISSKPPDRDHPYGHGKAETLASLI 87 (304)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHH
Confidence 45567788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHhHHH
Q 021846 179 FASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRA----FTNEIVKAYAQDHFFDVIT 254 (306)
Q Consensus 179 ~s~~m~~~~~~ii~esi~~Li~~~~~~~~~~~~~~~~i~i~~~s~vv~~~l~~~~~~----~~s~~l~a~a~~~~~Dv~~ 254 (306)
.+++++++|++++++++.+++.+.+. .+..++++++++++++|..+++|.++ .+|+.++|++.|+++|+++
T Consensus 88 ~~~~i~~~g~~i~~~a~~~~~~~~~~-----~~~~~~~~v~l~s~~~~~~l~~~~~~~~kk~~S~aL~Ada~h~~sD~~t 162 (304)
T COG0053 88 VSILIFAAGFEILLEAIKRLISPQPV-----EPPLLALGVALISIVIKEALYRYLRRVGKKTNSQALIADALHHRSDVLT 162 (304)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCC-----CccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHH
Confidence 99999999999999999999996652 44678999999999999999999864 6899999999999999999
Q ss_pred HHHHHHHHHHHHhhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccc
Q 021846 255 NIIGLVAVLLANYID-DWMDPVGAIIVSQISNSLVFSCACVHLLVFMW-GIEE 305 (306)
Q Consensus 255 n~~~i~~~~l~~~~~-~~iDpi~aiiIa~~i~~~~~~~~~~~~~~l~~-~~~~ 305 (306)
|+ +++.|+++.++| +|+||++|++|+++|++.+++.++++...||+ +.|+
T Consensus 163 s~-~~lvgl~~~~~g~~~lD~i~a~~I~~~Il~~~~~~~~~s~~~L~d~~~~~ 214 (304)
T COG0053 163 SL-AVLVGLLGSLLGWPWLDPLAALLISLYILKTGFRLFKESVNELMDAALDP 214 (304)
T ss_pred HH-HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCH
Confidence 98 566666688888 79999999999999999999999999999998 5553
No 3
>PRK09509 fieF ferrous iron efflux protein F; Reviewed
Probab=100.00 E-value=3e-35 Score=275.38 Aligned_cols=197 Identities=16% Similarity=0.168 Sum_probs=179.9
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHH
Q 021846 101 SETLAIRISNVANMVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFA 180 (306)
Q Consensus 101 ~~r~al~isl~~Nl~l~i~kl~a~~~sgSlaLiAdaldsl~D~~s~~i~l~~~~~~~k~~~~~~P~G~~R~E~l~~li~s 180 (306)
..+++.++++++|++++++|+++|+.+||+||+||++||+.|++++++++++.+.++||++++|||||+|+|++++++.+
T Consensus 8 ~~~~~~~~~~~~n~~l~i~k~~~g~~sgS~allaDa~hsl~D~~~~~l~l~~~~~s~k~~d~~~pyG~~r~E~l~~l~~~ 87 (299)
T PRK09509 8 LVSRAAIAATAMASLLLLIKIFAWWYTGSVSLLAALVDSLVDIAASLTNLLVVRYSLQPADDEHTFGHGKAESLAALAQS 87 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHH
Confidence 45578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHhHHHHH
Q 021846 181 SVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRA----FTNEIVKAYAQDHFFDVITNI 256 (306)
Q Consensus 181 ~~m~~~~~~ii~esi~~Li~~~~~~~~~~~~~~~~i~i~~~s~vv~~~l~~~~~~----~~s~~l~a~a~~~~~Dv~~n~ 256 (306)
+++++.++++++||++++++|++. ....++++++++++++|.++++|+++ .+|+.+++++.|+++|+++|+
T Consensus 88 ~~l~~~~~~~~~esi~~l~~~~~~-----~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~s~~l~a~~~~~~~D~~~s~ 162 (299)
T PRK09509 88 MFISGSALFLFLTGIQHLISPTPM-----NDPGVGIIVTLVALICTLILVTFQRWVVRKTQSQAVRADMLHYQSDVMMNG 162 (299)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCC-----CcchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987662 22456677888899999998887764 578999999999999999997
Q ss_pred HHHHHHHHHHhhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 021846 257 IGLVAVLLANYID-DWMDPVGAIIVSQISNSLVFSCACVHLLVFMWGI 303 (306)
Q Consensus 257 ~~i~~~~l~~~~~-~~iDpi~aiiIa~~i~~~~~~~~~~~~~~l~~~~ 303 (306)
+++.++++.+++ +|+||++++++++++++.++++++++...||+..
T Consensus 163 -~vl~~~~~~~~g~~~~D~i~aiii~~~il~~~~~i~~~~~~~Ll~~~ 209 (299)
T PRK09509 163 -AILLALGLSWYGWHRADALFALGIGIYILYSALRMGYEAVQSLLDRA 209 (299)
T ss_pred -HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 666677777777 6999999999999999999999999999999854
No 4
>PRK03557 zinc transporter ZitB; Provisional
Probab=100.00 E-value=1.9e-35 Score=278.29 Aligned_cols=196 Identities=17% Similarity=0.168 Sum_probs=177.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHHHH
Q 021846 103 TLAIRISNVANMVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASV 182 (306)
Q Consensus 103 r~al~isl~~Nl~l~i~kl~a~~~sgSlaLiAdaldsl~D~~s~~i~l~~~~~~~k~~~~~~P~G~~R~E~l~~li~s~~ 182 (306)
++.+++++++|++++++|+++|+.+||+||+||++||+.|++++++++++.+.++||++++|||||+|+|++++++++++
T Consensus 18 ~r~~~~~~~~n~~l~i~k~~~g~~tgS~AllaDa~hsl~D~~~~~~~l~a~~~s~kp~d~~hpyG~~r~E~l~al~~~~~ 97 (312)
T PRK03557 18 ARRLLYAFGVTAGFMLVEVIGGFLSGSLALLADAGHMLTDAAALLFALLAVQFSRRPPTIRHTFGWLRLTTLAAFVNAIA 97 (312)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHHHHHHH
Confidence 45578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHH---hCCHHHHHHHHHHHHhHHHHHHHH
Q 021846 183 MATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRA---FTNEIVKAYAQDHFFDVITNIIGL 259 (306)
Q Consensus 183 m~~~~~~ii~esi~~Li~~~~~~~~~~~~~~~~i~i~~~s~vv~~~l~~~~~~---~~s~~l~a~a~~~~~Dv~~n~~~i 259 (306)
|+++++++++||+++++++.+ + +..++++++++++++|.+++++.++ .+|..++++++|+++|+++|++++
T Consensus 98 l~~~~~~i~~eai~~l~~~~~-~-----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~s~~l~a~~~h~~~D~l~s~~vl 171 (312)
T PRK03557 98 LVVITILIVWEAIERFRTPRP-V-----AGGMMMAIAVAGLLANILSFWLLHHGSEEKNLNVRAAALHVLGDLLGSVGAI 171 (312)
T ss_pred HHHHHHHHHHHHHHHHcCCcc-c-----cchHHHHHHHHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997754 2 1345777788889999988887754 457899999999999999999777
Q ss_pred HHHHHHHhhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 021846 260 VAVLLANYID-DWMDPVGAIIVSQISNSLVFSCACVHLLVFMWGIE 304 (306)
Q Consensus 260 ~~~~l~~~~~-~~iDpi~aiiIa~~i~~~~~~~~~~~~~~l~~~~~ 304 (306)
++++++.+++ +|+||+++++|++++++.++++++++..+||++.+
T Consensus 172 v~~~~~~~~g~~~~Dpi~~ilis~~i~~~~~~l~~~~~~~Lld~~p 217 (312)
T PRK03557 172 IAALIIIWTGWTPADPILSILVSVLVLRSAWRLLKESVNELLEGAP 217 (312)
T ss_pred HHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 7777777667 68999999999999999999999999999998864
No 5
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-35 Score=270.14 Aligned_cols=199 Identities=17% Similarity=0.273 Sum_probs=187.4
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHH
Q 021846 101 SETLAIRISNVANMVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFA 180 (306)
Q Consensus 101 ~~r~al~isl~~Nl~l~i~kl~a~~~sgSlaLiAdaldsl~D~~s~~i~l~~~~~~~k~~~~~~P~G~~R~E~l~~li~s 180 (306)
+.+|.++++++.|.+++++|+++|+.|||+||+||++|++.|+++.++++++.+.++|+++.+|||||.|+|.+++++++
T Consensus 19 ~~~r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~~~a~r~~~~~~TfGy~R~eiLaa~~na 98 (296)
T COG1230 19 RNERRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAIKLARRPATKRFTFGYKRLEILAAFLNA 98 (296)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccHhHHHHHHHHHHH
Confidence 34556799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHhHHHHHHH
Q 021846 181 SVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRAF--TNEIVKAYAQDHFFDVITNIIG 258 (306)
Q Consensus 181 ~~m~~~~~~ii~esi~~Li~~~~~~~~~~~~~~~~i~i~~~s~vv~~~l~~~~~~~--~s~~l~a~a~~~~~Dv~~n~~~ 258 (306)
++++.+++++++|+++||.+|.+. +...|++++++++++|+++.+..++. +|.++|+.+.|.++|.+.|+++
T Consensus 99 v~Li~~s~~I~~EAi~R~~~P~~i------~~~~ml~va~~GL~vN~~~a~ll~~~~~~~lN~r~a~LHvl~D~Lgsv~v 172 (296)
T COG1230 99 LLLIVVSLLILWEAIQRLLAPPPI------HYSGMLVVAIIGLVVNLVSALLLHKGHEENLNMRGAYLHVLGDALGSVGV 172 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCC------CccchHHHHHHHHHHHHHHHHHhhCCCcccchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998872 23678999999999999999998875 4689999999999999999999
Q ss_pred HHHHHHHHhhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 021846 259 LVAVLLANYIDD-WMDPVGAIIVSQISNSLVFSCACVHLLVFMWGIEE 305 (306)
Q Consensus 259 i~~~~l~~~~~~-~iDpi~aiiIa~~i~~~~~~~~~~~~~~l~~~~~~ 305 (306)
++++++..+++| |+||+.+++|+++++..+|+..+++..+||+++||
T Consensus 173 Iia~i~i~~~~w~~~Dpi~si~i~~lil~~a~~l~k~s~~iLle~~P~ 220 (296)
T COG1230 173 IIAAIVIRFTGWSWLDPILSIVIALLILSSAWPLLKESLNILLEGVPE 220 (296)
T ss_pred HHHHHHHHHhCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999985 99999999999999999999999999999999985
No 6
>TIGR01297 CDF cation diffusion facilitator family transporter. This model describes a broadly distributed family of transporters, a number of which have been shown to transport divalent cations of cobalt, cadmium and/or zinc. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.
Probab=99.98 E-value=5.5e-31 Score=241.99 Aligned_cols=183 Identities=21% Similarity=0.314 Sum_probs=164.6
Q ss_pred HHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021846 116 LFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILESL 195 (306)
Q Consensus 116 l~i~kl~a~~~sgSlaLiAdaldsl~D~~s~~i~l~~~~~~~k~~~~~~P~G~~R~E~l~~li~s~~m~~~~~~ii~esi 195 (306)
++++|+++|+.+||.+|+||++||+.|++++++++++.+.++||++++|||||+|+|++++++.|+++++.+++++++++
T Consensus 2 l~~~k~~~g~~~~S~allada~~s~~D~~~~~~~l~~~~~~~~~~d~~~pyG~~r~E~l~~l~~~~~l~~~~~~~~~~si 81 (268)
T TIGR01297 2 LMLIKIVGGLLSGSLALLADAIHSLSDVAASAIALLALRISRRPADERHPFGHGRAEILAALLNGLFLVVVALFILYEAI 81 (268)
T ss_pred EEEeehHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhh-h
Q 021846 196 RTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRA----FTNEIVKAYAQDHFFDVITNIIGLVAVLLANYID-D 270 (306)
Q Consensus 196 ~~Li~~~~~~~~~~~~~~~~i~i~~~s~vv~~~l~~~~~~----~~s~~l~a~a~~~~~Dv~~n~~~i~~~~l~~~~~-~ 270 (306)
++++++++. .+..++++++++++++|.++++++++ .+|+++++++.|+++|+++|+.+ +.++.+..++ +
T Consensus 82 ~~l~~~~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~s~~l~a~~~~~~~D~~~s~~v-li~~~~~~~~~~ 155 (268)
T TIGR01297 82 ERLINPEPE-----IDGGTMLIVAIVGLIVNLILALYLHRVGHRLGSLALRAAALHVLSDALSSVGV-LIGALLIYFGWH 155 (268)
T ss_pred HHHhCCCCc-----ccchhHHHHHHHHHHHHHHHHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 999987642 23466788888999999999999876 56899999999999999999854 4444444454 7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 021846 271 WMDPVGAIIVSQISNSLVFSCACVHLLVFMWGIE 304 (306)
Q Consensus 271 ~iDpi~aiiIa~~i~~~~~~~~~~~~~~l~~~~~ 304 (306)
|+||++++++++++++.+++.++++...|++..+
T Consensus 156 ~~D~l~~i~i~~~i~~~~~~l~~~~~~~Ll~~~~ 189 (268)
T TIGR01297 156 WADPIAALLISLLILYTAFRLLKESINVLLDAAP 189 (268)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999998763
No 7
>PF01545 Cation_efflux: Cation efflux family; InterPro: IPR002524 Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt. These proteins are considered to be efflux pumps that remove these ions from cells [, ], however others are implicated in ion uptake []. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.; GO: 0008324 cation transmembrane transporter activity, 0006812 cation transport, 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3BYP_B 3BYR_A 3H90_B 2QFI_B 2ZZT_A.
Probab=99.95 E-value=1.3e-29 Score=234.39 Aligned_cols=193 Identities=27% Similarity=0.417 Sum_probs=163.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHHHHHHH
Q 021846 106 IRISNVANMVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMAT 185 (306)
Q Consensus 106 l~isl~~Nl~l~i~kl~a~~~sgSlaLiAdaldsl~D~~s~~i~l~~~~~~~k~~~~~~P~G~~R~E~l~~li~s~~m~~ 185 (306)
+++++++|++++++|+.+|+.+||.++++|++|++.|+++.++.+++.+.++||++.+||||++|+|++++++.++++++
T Consensus 1 L~i~~~~~~~~~~~~~~~~~~t~S~al~~d~~~sl~d~~~~~~~l~~~~~~~~~~~~~~pfG~~r~e~l~~~~~~~~l~~ 80 (284)
T PF01545_consen 1 LIISLILNLILAVVKIIAGIITGSLALLADGLHSLADAISLLISLFALRIASKPPDKRYPFGYGRLEPLAALIVSILLIF 80 (284)
T ss_dssp -HHHHHHHCCTHHCTTCSS-SSSSS---SCCCHHHHHHHHHHHHHHHHHHHTSS-SSSSSSSSTTHHHHHHHHHHHHHHH
T ss_pred CeeeHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccchhhhhhHhhhhhhhhHhh
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHH----hC--CHHHHHHHHHHHHhHHHHHHHH
Q 021846 186 LGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRA----FT--NEIVKAYAQDHFFDVITNIIGL 259 (306)
Q Consensus 186 ~~~~ii~esi~~Li~~~~~~~~~~~~~~~~i~i~~~s~vv~~~l~~~~~~----~~--s~~l~a~a~~~~~Dv~~n~~~i 259 (306)
+++.++.+++++++++++. + ...+++.++++++++|.+++++.+| .+ |+.+++.+.|+++|++.|++++
T Consensus 81 ~~~~~~~~si~~~~~~~~~-~----~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~~~~~~~~d~~~s~~v~ 155 (284)
T PF01545_consen 81 LGLFLIVESIQRLISPHEP-S----PPGIVLIVALVSIIVNLLLAWYLRRVGKRLQRRSPALRADALHSLIDVLSSLAVL 155 (284)
T ss_dssp HHHHHHHHHTTTSSSSSSS-S----TTTS-THHHHHHHHHHHHHHHHHHHHHHHS---SHHHHHHHHHHHHHTS-SSTS-
T ss_pred hHHHHHHHHhhcccccccc-h----hhhhhhhhhhhhhhHHHHHHHHHhhcccccccccccchhhhhhcccchhHHHHHH
Confidence 9999999999999998652 2 2344555588889999999998876 44 8999999999999999998555
Q ss_pred HHHHHHHhhh--hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 021846 260 VAVLLANYID--DWMDPVGAIIVSQISNSLVFSCACVHLLVFMWGI 303 (306)
Q Consensus 260 ~~~~l~~~~~--~~iDpi~aiiIa~~i~~~~~~~~~~~~~~l~~~~ 303 (306)
++.++....+ ||+||++++++++++++.+++.++++...||++.
T Consensus 156 i~~~~~~~~~~~~~~D~v~~l~i~~~i~~~~~~~~~~~~~~Ll~~~ 201 (284)
T PF01545_consen 156 ISLLLAYLGPWFWYADPVASLLIALFILYSGYPLIKESIRILLDAS 201 (284)
T ss_dssp SSSTSSSTT-STS-SSHHHHHHHHHHHHHHHHHHHHHHHHHHTT-S
T ss_pred HHHHHHHHHhcccccchhhhhHHHHHHhhhhhhchhhhhccccccc
Confidence 5555555543 4599999999999999999999999999999885
No 8
>KOG1484 consensus Putative Zn2+ transporter MSC2 (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]
Probab=99.90 E-value=6.1e-23 Score=189.63 Aligned_cols=198 Identities=13% Similarity=0.173 Sum_probs=172.3
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHH
Q 021846 101 SETLAIRISNVANMVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFA 180 (306)
Q Consensus 101 ~~r~al~isl~~Nl~l~i~kl~a~~~sgSlaLiAdaldsl~D~~s~~i~l~~~~~~~k~~~~~~P~G~~R~E~l~~li~s 180 (306)
+++|-+...+.+|+.+...+++.+..|+|++|++|++|++.|+.+.++.+++..++++|++.+||||+.|+|.+++++++
T Consensus 32 ~~sr~if~f~llnl~~~fv~l~y~~~snSlgLiSda~hm~FDctal~~gL~a~~is~~~~~~~fsyG~~r~evLagF~n~ 111 (354)
T KOG1484|consen 32 KDSRSIFLFLLLNLAFMFVELFYGSWSNSLGLISDAFHMFFDCTALLAGLYASVISKWPANDKFSYGYGRIEVLAGFVNG 111 (354)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHhhhhHHHHhcCCCccccCcchhHHHHHHHHHHH
Confidence 34455789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHH-----h-------------------
Q 021846 181 SVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRA-----F------------------- 236 (306)
Q Consensus 181 ~~m~~~~~~ii~esi~~Li~~~~~~~~~~~~~~~~i~i~~~s~vv~~~l~~~~~~-----~------------------- 236 (306)
++..+.++.++.|+++|+++|++. + ..-...+.+++.++|++-.+..+. .
T Consensus 112 vflvl~a~fi~~Es~eRl~~ppei-~-----t~rllvVS~~gllvnLvGi~aF~h~~~h~hg~~~~s~~~~h~~~~~~~~ 185 (354)
T KOG1484|consen 112 VFLVLIAFFIFSESVERLFDPPEI-H-----TNRLLVVSVLGLLVNLVGILAFSHGHAHSHGSHHHSSHSGHLALLFHSL 185 (354)
T ss_pred HHHHHHHHHHhHHHHHHhcCchhc-C-----CceeEEeeHHHHHHHHHHHHHhccccccccCCCCccccccchhcccccc
Confidence 999999999999999999998552 1 233456677788888776655432 0
Q ss_pred -----------------CCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021846 237 -----------------TNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDD-WMDPVGAIIVSQISNSLVFSCACVHLLV 298 (306)
Q Consensus 237 -----------------~s~~l~a~a~~~~~Dv~~n~~~i~~~~l~~~~~~-~iDpi~aiiIa~~i~~~~~~~~~~~~~~ 298 (306)
.+..+.....|-+.|.+.+++++++.++..+++| |.||+++++||++|+.+.++..+++-..
T Consensus 186 ~~~~~~~~~~~~~i~g~~~~~m~gifLHVLaDtlgSvGviist~Li~~~gw~~aDpicsllIailIf~sv~PL~k~s~~i 265 (354)
T KOG1484|consen 186 LGVWDLHHHAHGHIHGHSHENMPGIFLHVLADTLGSVGVIISTLLIKLFGWMIADPICSLLIAILIFLSVLPLLKYSGKI 265 (354)
T ss_pred ccccccccccccccCCcccccccchhHHHHHHHhcchHHHHHHHHHHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0123557789999999999988888899988986 9999999999999999999999999999
Q ss_pred Hhcccc
Q 021846 299 FMWGIE 304 (306)
Q Consensus 299 l~~~~~ 304 (306)
||+-.|
T Consensus 266 LLq~tP 271 (354)
T KOG1484|consen 266 LLQRTP 271 (354)
T ss_pred HHhcCC
Confidence 997654
No 9
>KOG1482 consensus Zn2+ transporter [Inorganic ion transport and metabolism]
Probab=99.87 E-value=6.7e-22 Score=185.10 Aligned_cols=197 Identities=20% Similarity=0.226 Sum_probs=175.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHHH
Q 021846 102 ETLAIRISNVANMVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFAS 181 (306)
Q Consensus 102 ~r~al~isl~~Nl~l~i~kl~a~~~sgSlaLiAdaldsl~D~~s~~i~l~~~~~~~k~~~~~~P~G~~R~E~l~~li~s~ 181 (306)
.++-++++.++.+.+.+.|++.|+.+||+|+++|+.|.+.|+.+-.+.+++.+.+++|++.+..||+.|+|.+++++.-.
T Consensus 71 ~~r~L~~~~~l~l~fm~~E~vGg~~a~SLAImTDAaHlLsD~~sf~isl~slw~s~~pa~~r~sfG~~R~Evlgal~Sv~ 150 (379)
T KOG1482|consen 71 AERKLSIAAALCLVFMIGEVVGGYKANSLAIMTDAAHLLSDVASFIISLFSLWLSSRPATKRMSFGFHRAEVLGALVSVL 150 (379)
T ss_pred hhhhHHHHHHHHHHHHHHHHhCCeeccchhhhhcchHHHHHHHHHHHHHHHHHHccCCCCCceecceehHHHHHHHHHHH
Confidence 34557899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHH------hC---------------CHH
Q 021846 182 VMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRA------FT---------------NEI 240 (306)
Q Consensus 182 ~m~~~~~~ii~esi~~Li~~~~~~~~~~~~~~~~i~i~~~s~vv~~~l~~~~~~------~~---------------s~~ 240 (306)
.+..+...++++++.|+++++.+. +...|++++.+++++|.++...... ++ |.+
T Consensus 151 ~IW~~tgvLV~~Ai~Rl~s~~~ev-----~g~~m~i~a~~gv~vNiim~~vL~~~~h~h~H~~~~s~g~~h~~~~~~n~n 225 (379)
T KOG1482|consen 151 LIWVVTGVLVYEAIQRLLSGDYEV-----NGGIMLITAAVGVAVNIIMGFVLHQSGHGHSHGGSHSHGHSHDHGEELNLN 225 (379)
T ss_pred HHHHhhhhhHHHHHhhhhcCceee-----cceEEEEEeehhhhhhhhhhhhhcccCCCCCCCCCCCcCcccccccccchH
Confidence 999999999999999999988642 3567888889999999888766532 11 278
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhhh--h-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 021846 241 VKAYAQDHFFDVITNIIGLVAVLLANYID--D-WMDPVGAIIVSQISNSLVFSCACVHLLVFMWGIE 304 (306)
Q Consensus 241 l~a~a~~~~~Dv~~n~~~i~~~~l~~~~~--~-~iDpi~aiiIa~~i~~~~~~~~~~~~~~l~~~~~ 304 (306)
++|.+.|.+.|.+.|.++++++.+. ++. | ..||+..++.+++++.+..++.+..+..|||++|
T Consensus 226 vraAyiHVlGDliQSvGV~iaa~Ii-~f~P~~~i~DpICT~~FSiivl~TT~~i~rd~~~iLmE~~P 291 (379)
T KOG1482|consen 226 VRAAFVHVLGDLIQSVGVLIAALII-YFKPEYKIADPICTFVFSIIVLGTTITILRDILGILMEGTP 291 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHhhheeE-EecccceecCchhhhhHHHHHHHhHHHHHHHHHHHHhcCCC
Confidence 9999999999999998555555554 554 4 8999999999999999999999999999999987
No 10
>COG3965 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
Probab=99.82 E-value=6.5e-19 Score=157.59 Aligned_cols=199 Identities=17% Similarity=0.209 Sum_probs=174.0
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCcchhHHHHHHH
Q 021846 98 LARSETLAIRISNVANMVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQ-TPNPYQYPIGKKRMQPLGI 176 (306)
Q Consensus 98 ~~~~~r~al~isl~~Nl~l~i~kl~a~~~sgSlaLiAdaldsl~D~~s~~i~l~~~~~~~-k~~~~~~P~G~~R~E~l~~ 176 (306)
....|++.+.+|++..+++....+++|+.+||++++-|++.|+.|+...++.++..|... +|.+.|||||+..+||+..
T Consensus 14 ~~~~eq~~L~~Si~~tvi~A~~GIi~GL~~gS~~IiFDGvYSl~da~mtllsL~vsrli~~~p~~~RF~~GfwhlEplvL 93 (314)
T COG3965 14 DSSNEQLYLRISIAGTVIFAAFGIIWGLLSGSMSIIFDGVYSLIDAGMTLLSLLVSRLIAKDPRDARFPYGFWHLEPLVL 93 (314)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcceEEEeccHHHHHHHHHHHHHHHHHHHhccCCCccccCcchhhhhhhHh
Confidence 345677889999999999999999999999999999999999999999999999888777 6777799999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHhH
Q 021846 177 LVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRA----FTNEIVKAYAQDHFFDV 252 (306)
Q Consensus 177 li~s~~m~~~~~~ii~esi~~Li~~~~~~~~~~~~~~~~i~i~~~s~vv~~~l~~~~~~----~~s~~l~a~a~~~~~Dv 252 (306)
.+++.+++.++++-++.++..+++|+.+.+ +.++++..+++..++...+++.+| .+|+.+.++...+..|.
T Consensus 94 ~ing~ll~ll~lyAlinAl~~l~dGGR~v~-----~~~ai~yt~~s~~~Ca~~~~~~~r~nrr~~s~lIald~kqW~Mst 168 (314)
T COG3965 94 AINGTLLALLCLYALINALGSLLDGGREVE-----PGHAIAYTLVSVTGCAAIAWKLRRLNRRLKSPLIALDTKQWLMST 168 (314)
T ss_pred hhccHHHHHHHHHHHHHHHHHHhcCCcccc-----ccHHHHHHHHHHHHHHHHHHHHHhhhccCCCchhhhHHHHHHHHH
Confidence 999999999999999999999999998633 567888888898888888888865 57899999999999999
Q ss_pred HHHHHHHHHHHHHHhh--------hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 021846 253 ITNIIGLVAVLLANYI--------DDWMDPVGAIIVSQISNSLVFSCACVHLLVFMW 301 (306)
Q Consensus 253 ~~n~~~i~~~~l~~~~--------~~~iDpi~aiiIa~~i~~~~~~~~~~~~~~l~~ 301 (306)
..|....++-+.++.. ..|.||+.-.+++++++....++.+.++.+.+.
T Consensus 169 ~lS~al~VaF~~a~~l~~T~~a~l~~Y~DPmvlaL~~~v~IplPlg~vk~al~eiLl 225 (314)
T COG3965 169 CLSAALFVAFAAAWLLAGTKFAHLVVYADPMVLALVCLVFIPLPLGTVKSALREILL 225 (314)
T ss_pred HHHHHHHHHHHHHHHhccCchhhhhcccCHHHHHHHHHheeeccHHHHHHHHHHHHh
Confidence 9998444433333322 148999999999999999999999999988764
No 11
>KOG1483 consensus Zn2+ transporter ZNT1 and related Cd2+/Zn2+ transporters (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]
Probab=99.82 E-value=1e-20 Score=177.91 Aligned_cols=195 Identities=17% Similarity=0.236 Sum_probs=163.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHHHHHHH
Q 021846 106 IRISNVANMVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMAT 185 (306)
Q Consensus 106 l~isl~~Nl~l~i~kl~a~~~sgSlaLiAdaldsl~D~~s~~i~l~~~~~~~k~~~~~~P~G~~R~E~l~~li~s~~m~~ 185 (306)
++.-++..+++|++|++.++.++|+||++|++|++.|+++..+++++.+.+++.+..+||||+.|+|.+|++++++++..
T Consensus 11 li~~l~ltiiFfvLEli~gyv~~sLaLiadSfHML~dIiaLivaf~~ik~a~~~~~~k~tyGw~rAEilGalvN~ifl~a 90 (404)
T KOG1483|consen 11 LISVLVLTIIFFVLELITGYVTNSLALIADSFHMLNDIIALIVAFWAIKEAKRIPLQKYTYGWARAEILGALVNAIFLTA 90 (404)
T ss_pred eeehHHHHHHHHHhhhhhhcccchHHHHhhHHHHHHHHHHHHHHHHHHHhhhcCcccccCcchhHHHHHhhhhHHHHHHH
Confidence 45678889999999999999999999999999999999999999999999998788899999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHH-------------------------------
Q 021846 186 LGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCR------------------------------- 234 (306)
Q Consensus 186 ~~~~ii~esi~~Li~~~~~~~~~~~~~~~~i~i~~~s~vv~~~l~~~~~------------------------------- 234 (306)
+.+.+..|+++|++.+... ..+...+.+.+++++.|++-+....
T Consensus 91 lc~~I~~EA~~R~I~p~~i-----~~P~~vL~vgi~gLi~Nvlg~~lfhdhg~~h~~~~H~h~hg~~~~~~~~~~~~~~~ 165 (404)
T KOG1483|consen 91 LCVSILIEAIERIIEPHHI-----ENPILVLYVGIIGLISNVLGLFLFHDHGHDHGHGVHGHSHGGMKGFIGLNLTHLHS 165 (404)
T ss_pred HHHHHHHHHHHhhcCCccc-----cCceeeehhhHHHHHHHHHHhheeeccCcccCCcCCCCCCCccccchhhhccCCch
Confidence 9999999999999988763 3344556666667777765443210
Q ss_pred ---------H------------------------------------------------hCCHHHHHHHHHHHHhHHHHHH
Q 021846 235 ---------A------------------------------------------------FTNEIVKAYAQDHFFDVITNII 257 (306)
Q Consensus 235 ---------~------------------------------------------------~~s~~l~a~a~~~~~Dv~~n~~ 257 (306)
+ .++.+++..+.|-+.|++.|++
T Consensus 166 ~~~G~~t~~~~~d~~~~~~p~~~l~~~~~~N~~~~s~pv~~~~S~~r~~~~~~~~e~~~~~lnmhGv~LhvL~Dalg~I~ 245 (404)
T KOG1483|consen 166 HAIGCNTLAKQLDTPLGPGPNAHLSGVMSQNLDGSSTPVQNHGSLSRDDAREKTEEKLDRNLNMHGVFLHVLGDALGSII 245 (404)
T ss_pred hccCCcchhhccccCCCCcchhhhccccccCCCCCCCccccCCcccccchhhhhhhhhhccccccceeeeeecccccceE
Confidence 0 0112334556677889999998
Q ss_pred HHHHHHHHHhhh----hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 021846 258 GLVAVLLANYID----DWMDPVGAIIVSQISNSLVFSCACVHLLVFMWGIEE 305 (306)
Q Consensus 258 ~i~~~~l~~~~~----~~iDpi~aiiIa~~i~~~~~~~~~~~~~~l~~~~~~ 305 (306)
+++++++.+++. .|+||+.+++++.++++++|...+++-..|++.+++
T Consensus 246 Vi~~A~~v~~t~~~~~~y~DP~lsi~~~~ii~~sa~pl~k~s~liLLq~~P~ 297 (404)
T KOG1483|consen 246 VIVSALFVYKTEYSWAYYLDPILSIVLTVIILFSAYPLLKESALILLQTTPG 297 (404)
T ss_pred EEEEEEEEEecceehhhhcCchHHHHHHHHHHHhhhHHHHHHHHHHHHhCCC
Confidence 888888777664 399999999999999999999999999999998875
No 12
>KOG2802 consensus Membrane protein HUEL (cation efflux superfamily) [General function prediction only]
Probab=99.72 E-value=1.3e-17 Score=155.60 Aligned_cols=179 Identities=16% Similarity=0.146 Sum_probs=134.3
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHH
Q 021846 100 RSETLAIRISNVANMVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVF 179 (306)
Q Consensus 100 ~~~r~al~isl~~Nl~l~i~kl~a~~~sgSlaLiAdaldsl~D~~s~~i~l~~~~~~~k~~~~~~P~G~~R~E~l~~li~ 179 (306)
+...+++.+++++|.+-+.+|+.+++.|||-+++|+++||++|..+++++.+|++.+.+.||..|||||.++.++..++.
T Consensus 203 k~s~rvVatAi~iN~l~~~~Kfg~w~~tgShsmfAEaIHS~aD~~NQ~lLa~Gis~S~q~PD~lhPYGYsnmRyVsSLIS 282 (503)
T KOG2802|consen 203 KGSGRVVATAICINGLNCFFKFGAWIYTGSHSMFAEAIHSLADTCNQLLLALGISKSVQTPDPLHPYGYSNMRYVSSLIS 282 (503)
T ss_pred cCCCceehhHHHHHHHHHHHHhhHhhhcccHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCCCCCCcccchhHHHHHHh
Confidence 44567788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-HHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHH----H---------------HhCCH
Q 021846 180 ASVMATLGLQI-ILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYC----R---------------AFTNE 239 (306)
Q Consensus 180 s~~m~~~~~~i-i~esi~~Li~~~~~~~~~~~~~~~~i~i~~~s~vv~~~l~~~~----~---------------~~~s~ 239 (306)
|+-++.+|..+ +++++..|++|++. ++..|+..+...+++......+.. + +.++|
T Consensus 283 gvGIfc~G~GlSiyhGv~gLlhpePi-----~~l~~ay~il~gSl~~eGasllvAi~evkr~Ak~~gmSi~dYV~~~~DP 357 (503)
T KOG2802|consen 283 GVGIFCMGCGLSIYHGVMGLLHPEPI-----ESLLWAYCILAGSLVSEGASLLVAINEVKRNAKAKGMSIYDYVMESRDP 357 (503)
T ss_pred ccceeeecccchhhhccccccCCCCC-----cchHHHHHHHhhHHHhcchHHHHHHHHHHHHHHHcCCCHHHHHhhcCCC
Confidence 99887777644 89999999999874 345677777666666544333222 1 11223
Q ss_pred HHHHHHHHHHHhHHHHH-HHHHHH--HHHHhhh-hhhhHHHHHHHHHHHHH
Q 021846 240 IVKAYAQDHFFDVITNI-IGLVAV--LLANYID-DWMDPVGAIIVSQISNS 286 (306)
Q Consensus 240 ~l~a~a~~~~~Dv~~n~-~~i~~~--~l~~~~~-~~iDpi~aiiIa~~i~~ 286 (306)
...+... .|...-. ++|+++ .+..++| +..|++|+|+|+.++..
T Consensus 358 s~nvVl~---EDtAAVtGv~IAaa~m~lss~tgnPIyD~~GSivvGaLLGm 405 (503)
T KOG2802|consen 358 STNVVLL---EDTAAVTGVIIAAACMGLSSITGNPIYDSLGSIVVGALLGM 405 (503)
T ss_pred cceEEEe---cchHHHHHHHHHHHHHHHHHhcCCCCccccchHHHHHHHHH
Confidence 3222221 1222211 122222 2344556 89999999999988743
No 13
>COG0053 MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
Probab=98.57 E-value=7.5e-07 Score=83.95 Aligned_cols=96 Identities=21% Similarity=0.226 Sum_probs=86.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHHH
Q 021846 102 ETLAIRISNVANMVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFAS 181 (306)
Q Consensus 102 ~r~al~isl~~Nl~l~i~kl~a~~~sgSlaLiAdaldsl~D~~s~~i~l~~~~~~~k~~~~~~P~G~~R~E~l~~li~s~ 181 (306)
.-.+..+++++|..++.++...+..+||.+|.||+.|+..|+++++..+++.- .. -+|+..++++++++.++
T Consensus 119 ~~~v~l~s~~~~~~l~~~~~~~~kk~~S~aL~Ada~h~~sD~~ts~~~lvgl~-~~-------~~g~~~lD~i~a~~I~~ 190 (304)
T COG0053 119 ALGVALISIVIKEALYRYLRRVGKKTNSQALIADALHHRSDVLTSLAVLVGLL-GS-------LLGWPWLDPLAALLISL 190 (304)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHH-HH-------HhCcHHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999999999999999987 32 24688899999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCccc
Q 021846 182 VMATLGLQIILESLRTLVSNEDQF 205 (306)
Q Consensus 182 ~m~~~~~~ii~esi~~Li~~~~~~ 205 (306)
+++..++.++.|++..|++...++
T Consensus 191 ~Il~~~~~~~~~s~~~L~d~~~~~ 214 (304)
T COG0053 191 YILKTGFRLFKESVNELMDAALDP 214 (304)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCCH
Confidence 999999999999999999955433
No 14
>TIGR01297 CDF cation diffusion facilitator family transporter. This model describes a broadly distributed family of transporters, a number of which have been shown to transport divalent cations of cobalt, cadmium and/or zinc. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.
Probab=98.38 E-value=3.9e-06 Score=77.03 Aligned_cols=92 Identities=21% Similarity=0.292 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHHHHH
Q 021846 104 LAIRISNVANMVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVM 183 (306)
Q Consensus 104 ~al~isl~~Nl~l~i~kl~a~~~sgSlaLiAdaldsl~D~~s~~i~l~~~~~~~k~~~~~~P~G~~R~E~l~~li~s~~m 183 (306)
.+...++++|.+++..+...+...+|.++.||+.|++.|+++++..+++...+. +|+.++|++++++.++++
T Consensus 98 ~~~~~~~~v~~~~~~~~~~~~~~~~s~~l~a~~~~~~~D~~~s~~vli~~~~~~--------~~~~~~D~l~~i~i~~~i 169 (268)
T TIGR01297 98 IVAIVGLIVNLILALYLHRVGHRLGSLALRAAALHVLSDALSSVGVLIGALLIY--------FGWHWADPIAALLISLLI 169 (268)
T ss_pred HHHHHHHHHHHHHHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHhHHHHHHHHHHH
Confidence 356688899999999999999999999999999999999999999999887763 467899999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCc
Q 021846 184 ATLGLQIILESLRTLVSNED 203 (306)
Q Consensus 184 ~~~~~~ii~esi~~Li~~~~ 203 (306)
+..++.+++++++.|++...
T Consensus 170 ~~~~~~l~~~~~~~Ll~~~~ 189 (268)
T TIGR01297 170 LYTAFRLLKESINVLLDAAP 189 (268)
T ss_pred HHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999998765
No 15
>PRK09509 fieF ferrous iron efflux protein F; Reviewed
Probab=98.35 E-value=6.8e-06 Score=77.16 Aligned_cols=92 Identities=15% Similarity=0.133 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHHHHH
Q 021846 104 LAIRISNVANMVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVM 183 (306)
Q Consensus 104 ~al~isl~~Nl~l~i~kl~a~~~sgSlaLiAdaldsl~D~~s~~i~l~~~~~~~k~~~~~~P~G~~R~E~l~~li~s~~m 183 (306)
.+..+++++|.++...+...+..++|.++.||+.|+..|+++++.++.+...+. +|+..+|++++++.++++
T Consensus 119 ~~~~~~~v~~~~~~~~~~~~~~~~~s~~l~a~~~~~~~D~~~s~~vl~~~~~~~--------~g~~~~D~i~aiii~~~i 190 (299)
T PRK09509 119 IVTLVALICTLILVTFQRWVVRKTQSQAVRADMLHYQSDVMMNGAILLALGLSW--------YGWHRADALFALGIGIYI 190 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hChHHHHHHHHHHHHHHH
Confidence 345678889999999999999999999999999999999999999888877652 367789999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCc
Q 021846 184 ATLGLQIILESLRTLVSNED 203 (306)
Q Consensus 184 ~~~~~~ii~esi~~Li~~~~ 203 (306)
+..++.+++++++.|++...
T Consensus 191 l~~~~~i~~~~~~~Ll~~~~ 210 (299)
T PRK09509 191 LYSALRMGYEAVQSLLDRAL 210 (299)
T ss_pred HHHHHHHHHHHHHHHhccCC
Confidence 99999999999999998654
No 16
>PRK03557 zinc transporter ZitB; Provisional
Probab=97.66 E-value=0.00043 Score=65.46 Aligned_cols=90 Identities=18% Similarity=0.187 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHHHHHHH
Q 021846 106 IRISNVANMVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMAT 185 (306)
Q Consensus 106 l~isl~~Nl~l~i~kl~a~~~sgSlaLiAdaldsl~D~~s~~i~l~~~~~~~k~~~~~~P~G~~R~E~l~~li~s~~m~~ 185 (306)
...++++|++.+.... -+...+|.++.||+.|.+.|+++++.++++...... .|+..++|+++++++++++.
T Consensus 128 ~~~~~~~~~~~~~~~~-~~~~~~s~~l~a~~~h~~~D~l~s~~vlv~~~~~~~-------~g~~~~Dpi~~ilis~~i~~ 199 (312)
T PRK03557 128 AVAGLLANILSFWLLH-HGSEEKNLNVRAAALHVLGDLLGSVGAIIAALIIIW-------TGWTPADPILSILVSVLVLR 199 (312)
T ss_pred HHHHHHHHHHHHHHHh-cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------cCCcchhHHHHHHHHHHHHH
Confidence 3466677776654433 355578999999999999999999998887755432 23445899999999999999
Q ss_pred HHHHHHHHHHHHhhcCCc
Q 021846 186 LGLQIILESLRTLVSNED 203 (306)
Q Consensus 186 ~~~~ii~esi~~Li~~~~ 203 (306)
.++.+++++++.|++..+
T Consensus 200 ~~~~l~~~~~~~Lld~~p 217 (312)
T PRK03557 200 SAWRLLKESVNELLEGAP 217 (312)
T ss_pred HHHHHHHHHHHHHHccCC
Confidence 999999999999998765
No 17
>KOG1485 consensus Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]
Probab=97.19 E-value=0.0012 Score=64.08 Aligned_cols=95 Identities=20% Similarity=0.226 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHHHHH
Q 021846 104 LAIRISNVANMVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVM 183 (306)
Q Consensus 104 ~al~isl~~Nl~l~i~kl~a~~~sgSlaLiAdaldsl~D~~s~~i~l~~~~~~~k~~~~~~P~G~~R~E~l~~li~s~~m 183 (306)
+.+.+++.+..+.+.+-.+.+..++|-.+.|-|.|...|++++.+++.+...+.. .+..++|+|+++++.++
T Consensus 231 ~~i~i~is~~~vk~~l~~~c~~~~ns~iv~a~A~dHr~D~lTn~vaLva~~la~~--------~~~~lDP~gailVS~~i 302 (412)
T KOG1485|consen 231 WLIAIMISAKEVKLRLTLYCAIKTNSNIVRANAWDHRNDVLTNSVALVAASLAYY--------YNYWLDPIGAILVSTYI 302 (412)
T ss_pred hhheehhhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhHHHHHHHHHHHHHHHHh--------hhhcccchhhhhhheeh
Confidence 5556777778888888899999999999999999999999999999999988754 23668999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCcccc
Q 021846 184 ATLGLQIILESLRTLVSNEDQFN 206 (306)
Q Consensus 184 ~~~~~~ii~esi~~Li~~~~~~~ 206 (306)
+..+..-..+++..|++...+|+
T Consensus 303 i~t~~~t~~~~i~~Lvg~~a~pe 325 (412)
T KOG1485|consen 303 IYTGGRTGLENIKELVGRSAPPE 325 (412)
T ss_pred hhhhhHHHHHHHHHHhCCCCCHH
Confidence 99999999999999998755443
No 18
>PF01545 Cation_efflux: Cation efflux family; InterPro: IPR002524 Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt. These proteins are considered to be efflux pumps that remove these ions from cells [, ], however others are implicated in ion uptake []. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.; GO: 0008324 cation transmembrane transporter activity, 0006812 cation transport, 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3BYP_B 3BYR_A 3H90_B 2QFI_B 2ZZT_A.
Probab=95.94 E-value=0.0081 Score=55.36 Aligned_cols=91 Identities=23% Similarity=0.232 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc--hHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchh-HHHHHHHHHHHHH
Q 021846 106 IRISNVANMVLFAAKVYASVKSG--SLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKK-RMQPLGILVFASV 182 (306)
Q Consensus 106 l~isl~~Nl~l~i~kl~a~~~sg--SlaLiAdaldsl~D~~s~~i~l~~~~~~~k~~~~~~P~G~~-R~E~l~~li~s~~ 182 (306)
..+++++|.++.....-.+...+ |..+.+++.|++.|.+.++.++++.....-.+ .. -+|++++++.+++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~~~~~~~~d~~~s~~v~i~~~~~~~~~-------~~~~~D~v~~l~i~~~ 181 (284)
T PF01545_consen 109 ALVSIIVNLLLAWYLRRVGKRLQRRSPALRADALHSLIDVLSSLAVLISLLLAYLGP-------WFWYADPVASLLIALF 181 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHS---SHHHHHHHHHHHHHTS-SSTS-SSSTSSSTT--------STS-SSHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHhhcccccccccccchhhhhhcccchhHHHHHHHHHHHHHHHh-------cccccchhhhhHHHHH
Confidence 56888899999888888877788 99999999999999999988888776554332 22 3799999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCc
Q 021846 183 MATLGLQIILESLRTLVSNED 203 (306)
Q Consensus 183 m~~~~~~ii~esi~~Li~~~~ 203 (306)
++..++.++.++++.|++...
T Consensus 182 i~~~~~~~~~~~~~~Ll~~~~ 202 (284)
T PF01545_consen 182 ILYSGYPLIKESIRILLDASP 202 (284)
T ss_dssp HHHHHHHHHHHHHHHHTT-SH
T ss_pred Hhhhhhhchhhhhcccccccc
Confidence 999999999999999998764
No 19
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=93.24 E-value=0.6 Score=43.96 Aligned_cols=91 Identities=20% Similarity=0.198 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHHHHH
Q 021846 104 LAIRISNVANMVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVM 183 (306)
Q Consensus 104 ~al~isl~~Nl~l~i~kl~a~~~sgSlaLiAdaldsl~D~~s~~i~l~~~~~~~k~~~~~~P~G~~R~E~l~~li~s~~m 183 (306)
.+..+++++|++.+.+-.-. ...++-+-+--+|.+.|.+.++.+..+.-.... +|+...+|+.+++.++++
T Consensus 129 ~va~~GL~vN~~~a~ll~~~--~~~~lN~r~a~LHvl~D~Lgsv~vIia~i~i~~-------~~w~~~Dpi~si~i~~li 199 (296)
T COG1230 129 VVAIIGLVVNLVSALLLHKG--HEENLNMRGAYLHVLGDALGSVGVIIAAIVIRF-------TGWSWLDPILSIVIALLI 199 (296)
T ss_pred HHHHHHHHHHHHHHHHhhCC--CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCccchHHHHHHHHHH
Confidence 34557777787665544333 223788888899999999999888886655432 355668999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCc
Q 021846 184 ATLGLQIILESLRTLVSNED 203 (306)
Q Consensus 184 ~~~~~~ii~esi~~Li~~~~ 203 (306)
+-.+..++.++.+-++++.+
T Consensus 200 l~~a~~l~k~s~~iLle~~P 219 (296)
T COG1230 200 LSSAWPLLKESLNILLEGVP 219 (296)
T ss_pred HHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999998776
No 20
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=91.58 E-value=2.5 Score=32.30 Aligned_cols=47 Identities=15% Similarity=0.283 Sum_probs=36.9
Q ss_pred HHHHhHHHHHHHHHHHHHHHhhhhhhhHH---HHHHHHHHHHHHHHHHHH
Q 021846 247 DHFFDVITNIIGLVAVLLANYIDDWMDPV---GAIIVSQISNSLVFSCAC 293 (306)
Q Consensus 247 ~~~~Dv~~n~~~i~~~~l~~~~~~~iDpi---~aiiIa~~i~~~~~~~~~ 293 (306)
+...|.+-+.+|++.+.+....+|-+||+ +-++.+..+++.+|++.+
T Consensus 33 ~Rd~D~~fs~vgLl~g~IL~~~gwRldp~ll~~Q~l~~~~~i~f~~e~ir 82 (84)
T PF07444_consen 33 SRDYDIFFSSVGLLYGLILWFQGWRLDPILLFGQMLLVGLLIFFGWETIR 82 (84)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45579999999999998888788999999 566666667777776654
No 21
>COG4956 Integral membrane protein (PIN domain superfamily) [General function prediction only]
Probab=89.94 E-value=15 Score=34.96 Aligned_cols=52 Identities=19% Similarity=0.248 Sum_probs=38.4
Q ss_pred HhHHHHHHHHHHHHHHHhh--------h-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 021846 250 FDVITNIIGLVAVLLANYI--------D-DWMDPVGAIIVSQISNSLVFSCACVHLLVFMW 301 (306)
Q Consensus 250 ~Dv~~n~~~i~~~~l~~~~--------~-~~iDpi~aiiIa~~i~~~~~~~~~~~~~~l~~ 301 (306)
.+++...+|++.|++...+ + +++-++.++++.+++++.|++.+..+-.++|.
T Consensus 79 ~~ilf~tiGLiiGLlia~l~~~pL~~~~ip~~~~ii~vi~t~il~y~G~~~~~k~~de~~~ 139 (356)
T COG4956 79 TTILFGTIGLIIGLLIAVLLSSPLFLLPIPFISTIIPVILTIILAYFGFQLADKKRDEFLR 139 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHhhCCccHHHhHHHHHHHHHHHHHhhHHhhhhhHHHHH
Confidence 4555555555555544332 2 68999999999999999999999887777763
No 22
>COG1183 PssA Phosphatidylserine synthase [Lipid metabolism]
Probab=82.66 E-value=19 Score=32.74 Aligned_cols=82 Identities=13% Similarity=0.079 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 021846 214 WVVGIMLSVTLVKLLLVVYCRAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIIVSQISNSLVFSCAC 293 (306)
Q Consensus 214 ~~i~i~~~s~vv~~~l~~~~~~~~s~~l~a~a~~~~~Dv~~n~~~i~~~~l~~~~~~~iDpi~aiiIa~~i~~~~~~~~~ 293 (306)
.+.+..+++.++...=-..-|+.+..+.-..-.|++.|.++ +|++-+++.+..+-.-.+.+-++-.++++-...|.++
T Consensus 37 ~a~~~i~lA~i~DglDG~VAR~~~~~s~~G~~lDSLaD~Vs--FgVaPA~l~y~~~~~~~~~~~~~a~~~~~~~alRLAr 114 (234)
T COG1183 37 AALLLILLALILDGLDGRVARKLNAKSAFGAELDSLADLVS--FGVAPALLLYSSGLNTGPLGLLAALLYVLCGALRLAR 114 (234)
T ss_pred HHHHHHHHHHHHcccchHHHHhcCCcchHHHHHhHHHHHHH--hhHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHH
Confidence 35555566666666666666887766666888999999998 5888888877665333677888888888888888887
Q ss_pred HHHH
Q 021846 294 VHLL 297 (306)
Q Consensus 294 ~~~~ 297 (306)
-+..
T Consensus 115 FN~~ 118 (234)
T COG1183 115 FNVK 118 (234)
T ss_pred ccCc
Confidence 6644
No 23
>TIGR00473 pssA CDP-diacylglycerol--serine O-phosphatidyltransferase. This enzyme, CDP-diacylglycerol--serine O-phosphatidyltransferase, is involved in phospholipid biosynthesis catalyzing the reaction CDP-diacylglycerol + L-serine = CMP + L-1-phosphatidylserine. Members of this family do not bear any significant sequence similarity to the corresponding E.coli protein.
Probab=66.83 E-value=78 Score=26.72 Aligned_cols=81 Identities=16% Similarity=0.147 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 021846 214 WVVGIMLSVTLVKLLLVVYCRAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIIVSQISNSLVFSCAC 293 (306)
Q Consensus 214 ~~i~i~~~s~vv~~~l~~~~~~~~s~~l~a~a~~~~~Dv~~n~~~i~~~~l~~~~~~~iDpi~aiiIa~~i~~~~~~~~~ 293 (306)
++.+...++.+...+=-..-|+.+..+-...-.|+..|.++ +|++.+++....+ ...+.+.++..++++-..+|.++
T Consensus 22 ~a~~~l~~a~~~D~~DG~vAR~~~~~s~~G~~lDsl~D~vs--fgvaPa~l~~~~~-~~~~~~~~~~~~~~l~~a~RLAr 98 (151)
T TIGR00473 22 RACFLILLSMFFDFLDGRVARKTNRVSDFGKELDSLADVVS--FGVAPAALAYSIG-NFQTIGILVAALFFLCGILRLAR 98 (151)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHcCCCChHHHHHHHHHHHHH--HHHHHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHH
Confidence 34444455556665555556776666677888999999997 4677776665442 12333444445677888899888
Q ss_pred HHHH
Q 021846 294 VHLL 297 (306)
Q Consensus 294 ~~~~ 297 (306)
-+..
T Consensus 99 FN~~ 102 (151)
T TIGR00473 99 FNVL 102 (151)
T ss_pred hccc
Confidence 7653
No 24
>PF09685 Tic20: Tic20-like protein; InterPro: IPR019109 This entry represents a group of uncharacterised conserved proteins including a chloroplast protein import component called Tic20. Chloroplast function requires the import of nuclear encoded proteins from the cytoplasm across the chloroplast double membrane. This is accomplished by two protein complexes, the Toc complex located at the outer membrane and the Tic complex located at the inner membrane. The Toc complex recognises specific proteins by a cleavable N-terminal sequence and is primarily responsible for translocation through the outer membrane, while the Tic complex translocates the protein through the inner membrane. Tic20 is a core member of the Tic complex and is deeply embedded in the inner envelope membrane. It is thought to function as a protein conducting component of the Tic complex [].
Probab=53.24 E-value=1e+02 Score=23.63 Aligned_cols=24 Identities=33% Similarity=0.569 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCc
Q 021846 143 LLSGFILWFTAFSMQTPNPYQYPI 166 (306)
Q Consensus 143 ~~s~~i~l~~~~~~~k~~~~~~P~ 166 (306)
++..+...++...+.+..+.+||+
T Consensus 81 l~~~v~~I~~~~~a~~g~~~~~P~ 104 (109)
T PF09685_consen 81 LLSLVLSIIGAIKANKGEPYRYPF 104 (109)
T ss_pred HHHHHHHHHHHHHHHCCCeeecCe
Confidence 444555566777778888888987
No 25
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=51.45 E-value=1.8e+02 Score=25.86 Aligned_cols=100 Identities=10% Similarity=0.178 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHhHHHHHHHHHHH
Q 021846 184 ATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRAFT-NEIVKAYAQDHFFDVITNIIGLVAV 262 (306)
Q Consensus 184 ~~~~~~ii~esi~~Li~~~~~~~~~~~~~~~~i~i~~~s~vv~~~l~~~~~~~~-s~~l~a~a~~~~~Dv~~n~~~i~~~ 262 (306)
+++|+..+..++..++.... +.++ ....++.++++-.....+++|.+|.+ +.+-|-.+.....-...+.+.=++-
T Consensus 103 l~lg~~aLlsgitaff~~nA-~~~G---lItlll~a~vgGfamy~my~y~yr~~ad~sqr~~~~K~~lv~~~sm~lWi~v 178 (226)
T COG4858 103 LFLGAMALLSGITAFFQKNA-QVYG---LITLLLTAVVGGFAMYIMYYYAYRMRADNSQRPGTWKYLLVAVLSMLLWIAV 178 (226)
T ss_pred HHHHHHHHHHHHHHHHhcCC-cchh---HHHHHHHHHhhhHHHHHHHHHHHHhhcccccCCchHHHHHHHHHHHHHHHHH
Confidence 44555566677777886554 2211 12223333344444555666665532 1222222222222222222111111
Q ss_pred HHH-Hh----hhhhhhHHHHHHHHHHHHHH
Q 021846 263 LLA-NY----IDDWMDPVGAIIVSQISNSL 287 (306)
Q Consensus 263 ~l~-~~----~~~~iDpi~aiiIa~~i~~~ 287 (306)
... .. ..+-+||+.-.+++..++..
T Consensus 179 ~i~t~~lPtslN~~L~pi~l~IiGav~lal 208 (226)
T COG4858 179 MIATVFLPTSLNPQLPPIALTIIGAVILAL 208 (226)
T ss_pred HHHHhhCCCcCCcCCchHHHHHHHHHHHHH
Confidence 111 11 13678999988888877544
No 26
>TIGR00816 tdt C4-dicarboxylate transporter/malic acid transport protein. spanners (TMSs).
Probab=50.62 E-value=2.2e+02 Score=26.68 Aligned_cols=17 Identities=18% Similarity=0.335 Sum_probs=8.5
Q ss_pred hhhhHHHHHHHHHHHHH
Q 021846 270 DWMDPVGAIIVSQISNS 286 (306)
Q Consensus 270 ~~iDpi~aiiIa~~i~~ 286 (306)
||++.+..++.++++.+
T Consensus 101 w~~~~~l~l~~~~~~~~ 117 (320)
T TIGR00816 101 WYIGAIGQLLFSVIVPF 117 (320)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45555555545444443
No 27
>PF11712 Vma12: Endoplasmic reticulum-based factor for assembly of V-ATPase; InterPro: IPR021013 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. The yeast vacuolar proton-translocating ATPase (V-ATPase) is the best characterised member of the V-ATPase family. A total of thirteen genes are required for encoding the subunits of the enzyme complex itself and an additional three for providing factors necessary for the assembly of the whole. Vma12 is one of these latter, all three of which are localised to the endoplasmic reticulum [].
Probab=48.81 E-value=52 Score=27.30 Aligned_cols=23 Identities=17% Similarity=0.122 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhch
Q 021846 107 RISNVANMVLFAAKVYASVKSGS 129 (306)
Q Consensus 107 ~isl~~Nl~l~i~kl~a~~~sgS 129 (306)
-+++++|+++.++-..++.+..+
T Consensus 78 qls~v~Nilvsv~~~~~~~~~~~ 100 (142)
T PF11712_consen 78 QLSTVFNILVSVFAVFFAGWYWA 100 (142)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 36778888888777666554333
No 28
>PF11654 DUF2665: Protein of unknown function (DUF2665); InterPro: IPR024242 This entry represents the non classical export protein 1 family. Family members are Involved in a novel pathway of export of proteins that lack a cleavable signal sequence [].; GO: 0009306 protein secretion
Probab=46.02 E-value=19 Score=24.46 Aligned_cols=19 Identities=21% Similarity=0.448 Sum_probs=15.2
Q ss_pred hhhhhHHHHHHHHHHHHHH
Q 021846 269 DDWMDPVGAIIVSQISNSL 287 (306)
Q Consensus 269 ~~~iDpi~aiiIa~~i~~~ 287 (306)
+.++||+.|+++++.-.++
T Consensus 4 sr~lDP~~av~iG~~ayyl 22 (47)
T PF11654_consen 4 SRFLDPLFAVFIGTSAYYL 22 (47)
T ss_pred hhhhhhHHHHHHHHHHHHH
Confidence 4689999999998876544
No 29
>KOG1482 consensus Zn2+ transporter [Inorganic ion transport and metabolism]
Probab=44.93 E-value=89 Score=30.44 Aligned_cols=71 Identities=21% Similarity=0.259 Sum_probs=60.3
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccc
Q 021846 130 LAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILESLRTLVSNEDQFNL 207 (306)
Q Consensus 130 laLiAdaldsl~D~~s~~i~l~~~~~~~k~~~~~~P~G~~R~E~l~~li~s~~m~~~~~~ii~esi~~Li~~~~~~~~ 207 (306)
+.+-|--+|-+.|++=+...+++..+.+=.| +|.-++|+-.++++++.+...+.++++.+..|+++.+ .++
T Consensus 224 ~nvraAyiHVlGDliQSvGV~iaa~Ii~f~P------~~~i~DpICT~~FSiivl~TT~~i~rd~~~iLmE~~P-~~~ 294 (379)
T KOG1482|consen 224 LNVRAAFVHVLGDLIQSVGVLIAALIIYFKP------EYKIADPICTFVFSIIVLGTTITILRDILGILMEGTP-RNL 294 (379)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhheeEEecc------cceecCchhhhhHHHHHHHhHHHHHHHHHHHHhcCCC-ccC
Confidence 7788889999999999998888877765434 3555899999999999999999999999999999876 344
No 30
>PRK10764 potassium-tellurite ethidium and proflavin transporter; Provisional
Probab=44.92 E-value=2.7e+02 Score=26.22 Aligned_cols=23 Identities=22% Similarity=0.297 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Q 021846 178 VFASVMATLGLQIILESLRTLVS 200 (306)
Q Consensus 178 i~s~~m~~~~~~ii~esi~~Li~ 200 (306)
.+++.|...|+....+...+..+
T Consensus 13 ~f~~~mG~~gL~~~~~~~~~~~~ 35 (324)
T PRK10764 13 YFGIVLGLIGLGFAWRYAAQLWP 35 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC
Confidence 45788888888888877666554
No 31
>PHA02975 hypothetical protein; Provisional
Probab=43.19 E-value=1.3e+02 Score=22.03 Aligned_cols=62 Identities=5% Similarity=0.170 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 021846 173 PLGILVFASVMATLG--LQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCR 234 (306)
Q Consensus 173 ~l~~li~s~~m~~~~--~~ii~esi~~Li~~~~~~~~~~~~~~~~i~i~~~s~vv~~~l~~~~~ 234 (306)
-+.+-++|++|--.- +.=+.|.+++.+++...|.-......+.++..+..+++-+++++|.+
T Consensus 3 KLYaaiFGvFmsS~DdDF~nFI~vVksVLtdk~~~~~~~~~~~~~ii~i~~v~~~~~~~flYLK 66 (69)
T PHA02975 3 KLFTGTYGVFLESNDSDFEDFIDTIMHVLTGKKEPKKKSSLSIILIIFIIFITCIAVFTFLYLK 66 (69)
T ss_pred hHHHHHHHhhcCCChHHHHHHHHHHHHHHcCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555443221 34456777777776543332111112233333333444555666654
No 32
>KOG1484 consensus Putative Zn2+ transporter MSC2 (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]
Probab=42.24 E-value=3.3e+02 Score=26.35 Aligned_cols=86 Identities=12% Similarity=0.121 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhh-------h-hhhhHHHHHHHHHHHHH
Q 021846 215 VVGIMLSVTLVKLLLVVYCRAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYI-------D-DWMDPVGAIIVSQISNS 286 (306)
Q Consensus 215 ~i~i~~~s~vv~~~l~~~~~~~~s~~l~a~a~~~~~Dv~~n~~~i~~~~l~~~~-------~-~~iDpi~aiiIa~~i~~ 286 (306)
.+...+..+...++..+|+...+|-.+.+++.|...|.....+++.++++.-+- | ..+..+++.+=+++...
T Consensus 37 if~f~llnl~~~fv~l~y~~~snSlgLiSda~hm~FDctal~~gL~a~~is~~~~~~~fsyG~~r~evLagF~n~vflvl 116 (354)
T KOG1484|consen 37 IFLFLLLNLAFMFVELFYGSWSNSLGLISDAFHMFFDCTALLAGLYASVISKWPANDKFSYGYGRIEVLAGFVNGVFLVL 116 (354)
T ss_pred hHHHHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHhhhhHHHHhcCCCccccCcchhHHHHHHHHHHHHHHHH
Confidence 345555666777777888888889999999999999999998888888876432 2 23444444444555555
Q ss_pred HHHHHHHHHHHHHh
Q 021846 287 LVFSCACVHLLVFM 300 (306)
Q Consensus 287 ~~~~~~~~~~~~l~ 300 (306)
.++-++.+..-.|.
T Consensus 117 ~a~fi~~Es~eRl~ 130 (354)
T KOG1484|consen 117 IAFFIFSESVERLF 130 (354)
T ss_pred HHHHHhHHHHHHhc
Confidence 55555555554444
No 33
>COG0581 PstA ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]
Probab=41.14 E-value=3.1e+02 Score=25.82 Aligned_cols=77 Identities=10% Similarity=0.090 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhh-----h-hhhhHHHHHHHHHHHHHHHHHHHHH
Q 021846 221 SVTLVKLLLVVYCRAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYI-----D-DWMDPVGAIIVSQISNSLVFSCACV 294 (306)
Q Consensus 221 ~s~vv~~~l~~~~~~~~s~~l~a~a~~~~~Dv~~n~~~i~~~~l~~~~-----~-~~iDpi~aiiIa~~i~~~~~~~~~~ 294 (306)
+++-+-+....|...+...+--+.......|.+.++=.++.|+++..+ + .+-=..|++.++++++-...+.+.+
T Consensus 86 i~~PiGv~aaIYL~EYa~~~~~t~~ir~~i~~La~vPSIV~GLFg~~~fV~~~g~~~S~laGaLaLall~LP~iirttee 165 (292)
T COG0581 86 IGVPLGIGAGIYLAEYAKKSRLTKVIRFAIDILASVPSIVYGLFGLGFFVVTLGFGFSALAGALALALLMLPVVIRTTEE 165 (292)
T ss_pred HHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334444555555544455566677788888888777777776543 3 2445667888888887777777766
Q ss_pred HHH
Q 021846 295 HLL 297 (306)
Q Consensus 295 ~~~ 297 (306)
.+.
T Consensus 166 aL~ 168 (292)
T COG0581 166 ALR 168 (292)
T ss_pred HHH
Confidence 553
No 34
>PF02038 ATP1G1_PLM_MAT8: ATP1G1/PLM/MAT8 family; InterPro: IPR000272 The FXYD protein family contains at least seven members in mammals []. Two other family members that are not obvious orthologs of any identified mammalian FXYD protein exist in zebrafish. All these proteins share a signature sequence of six conserved amino acids comprising the FXYD motif in the NH2-terminus, and two glycines and one serine residue in the transmembrane domain. FXYD proteins are widely distributed in mammalian tissues with prominent expression in tissues that perform fluid and solute transport or that are electrically excitable. Initial functional characterisation suggested that FXYD proteins act as channels or as modulators of ion channels however studies have revealed that most FXYD proteins have another specific function and act as tissue-specific regulatory subunits of the Na,K-ATPase. Each of these auxiliary subunits produces a distinct functional effect on the transport characteristics of the Na,K-ATPase that is adjusted to the specific functional demands of the tissue in which the FXYD protein is expressed. FXYD proteins appear to preferentially associate with Na,K-ATPase alpha1-beta isozymes, and affect their function in a way that render them operationally complementary or supplementary to coexisting isozymes.; GO: 0005216 ion channel activity, 0006811 ion transport, 0016020 membrane; PDB: 2JO1_A 2JP3_A 2ZXE_G 3A3Y_G 3N23_E 3B8E_H 3KDP_G 3N2F_E.
Probab=39.83 E-value=66 Score=22.12 Aligned_cols=29 Identities=31% Similarity=0.535 Sum_probs=19.3
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 021846 162 YQYPIGKKRMQPLGILVFASVMATLGLQII 191 (306)
Q Consensus 162 ~~~P~G~~R~E~l~~li~s~~m~~~~~~ii 191 (306)
..|.|-|..+. +++++++.+++++|+.++
T Consensus 5 ~pF~YDy~tLr-igGLi~A~vlfi~Gi~ii 33 (50)
T PF02038_consen 5 DPFYYDYETLR-IGGLIFAGVLFILGILII 33 (50)
T ss_dssp SGGGGCHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCccchhHhh-ccchHHHHHHHHHHHHHH
Confidence 34555565544 477788888888887654
No 35
>PLN02601 beta-carotene hydroxylase
Probab=37.52 E-value=2e+02 Score=26.89 Aligned_cols=17 Identities=18% Similarity=0.073 Sum_probs=10.1
Q ss_pred HHHHhHHHHHHHHHHHH
Q 021846 247 DHFFDVITNIIGLVAVL 263 (306)
Q Consensus 247 ~~~~Dv~~n~~~i~~~~ 263 (306)
.-+||++.=++++.+-.
T Consensus 178 FE~NDlFaVifAvpAIa 194 (303)
T PLN02601 178 FELNDVFAIVNAVPAIG 194 (303)
T ss_pred cccccchhhhhHHHHHH
Confidence 34799887655544433
No 36
>PRK14856 nhaA pH-dependent sodium/proton antiporter; Provisional
Probab=35.55 E-value=4.7e+02 Score=26.20 Aligned_cols=144 Identities=22% Similarity=0.236 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHhchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcchhHH-HHHHHHHHHHHHHHHHHHHH
Q 021846 113 NMVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRM-QPLGILVFASVMATLGLQII 191 (306)
Q Consensus 113 Nl~l~i~kl~a~~~sgSlaLiAdaldsl~D~~s~~i~l~~~~~~~k~~~~~~P~G~~R~-E~l~~li~s~~m~~~~~~ii 191 (306)
-+++.++-+.+=+..||. .+|++|.+.+.-. ...+|..++ .++--.++-.+|..--+.+.
T Consensus 25 GilLl~a~~~Ali~ANsp--~~~~Y~~~~~~~~-----------------~~~~~~~~l~~sl~~wINDgLMaiFFf~VG 85 (438)
T PRK14856 25 GIFLFLNAVLAMVVANSF--LKESYFALWHTPF-----------------GFQIGDFFIGFSLHNWIDDVLMALFFLMIG 85 (438)
T ss_pred HHHHHHHHHHHHHHHhCC--cHHHHHHHHcCcc-----------------ccccccccCCCCHHHHHHHHHHHHHHHHHH
Confidence 344555555555667774 3666776654210 011111111 23444455555555555555
Q ss_pred HHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhh---
Q 021846 192 LESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYI--- 268 (306)
Q Consensus 192 ~esi~~Li~~~~~~~~~~~~~~~~i~i~~~s~vv~~~l~~~~~~~~s~~l~a~a~~~~~Dv~~n~~~i~~~~l~~~~--- 268 (306)
.|-=++++.|+-. + .......++.++.++++-...|+.... .++..+..+.-.-+|+.... |++ ++++...
T Consensus 86 LEIKrE~~~GeLs-~--~rka~lPi~AAlGGmivPAlIY~~~n~-~~~~~~GWgIPmATDIAFAl-gvL-allG~rvP~~ 159 (438)
T PRK14856 86 LEIKRELLFGELS-S--FKKASFPVIAALGGMIAPGLIYFFLNA-DTPSQHGFGIPMATDIAFAL-GVI-MLLGKRVPTA 159 (438)
T ss_pred HHHHHHHhcccCC-C--hHHHHHHHHHHHhccHHHHHHHhheec-CCCccCccccccHHHHHHHH-HHH-HHhcCCCCHH
Confidence 5555666665541 2 123344556666777887777776644 44568888888889998876 544 4444332
Q ss_pred ------h-hhhhHHHHHHHH
Q 021846 269 ------D-DWMDPVGAIIVS 281 (306)
Q Consensus 269 ------~-~~iDpi~aiiIa 281 (306)
. -..|-++|++|-
T Consensus 160 LrvFLlaLAIvDDlgAI~VI 179 (438)
T PRK14856 160 LKVFLITLAVADDLGAIVVI 179 (438)
T ss_pred HHHHHHHHHHHHHhhhHhhe
Confidence 1 356777776653
No 37
>PRK10263 DNA translocase FtsK; Provisional
Probab=32.50 E-value=8.3e+02 Score=28.16 Aligned_cols=31 Identities=16% Similarity=0.213 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHHHHHHH
Q 021846 256 IIGLVAVLLANYIDDWMDPVGAIIVSQISNS 286 (306)
Q Consensus 256 ~~~i~~~~l~~~~~~~iDpi~aiiIa~~i~~ 286 (306)
.+|+++.++...+.+++-.+|+.++.++++.
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa~LILLlllL 172 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGGTIALLCVWA 172 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3577776666666566666666555444433
No 38
>PF07062 Clc-like: Clc-like; InterPro: IPR010761 Clc proteins are a nine-member gene family of chloride channels that have diverse roles in the plasma membrane and in intracellular organelles, especially membrane excitability and the maintenance of osmotic balance [, ]. This family contains a number of Clc-like proteins that are approximately 250 residues long and their homologues. ; GO: 0016021 integral to membrane
Probab=27.21 E-value=4.6e+02 Score=23.49 Aligned_cols=46 Identities=22% Similarity=0.097 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HhchHHHHHhHHHHHHHHHHHHH
Q 021846 103 TLAIRISNVANMVLFAAKVYASV---KSGSLAIIASTLDSLLDLLSGFI 148 (306)
Q Consensus 103 r~al~isl~~Nl~l~i~kl~a~~---~sgSlaLiAdaldsl~D~~s~~i 148 (306)
.+++.+-+....++.++-+..|+ -..+.+++-+.+--++-+++...
T Consensus 104 h~AvLil~~~s~lf~~lsi~~~iCa~c~~~~ai~~~v~~~ia~l~S~~g 152 (211)
T PF07062_consen 104 HKAVLILISFSMLFALLSICFGICAPCHPSFAIFYTVLVFIAALLSLIG 152 (211)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHH
Confidence 34555555566666666655544 45677766665554444444433
No 39
>COG4171 SapC ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]
Probab=24.67 E-value=5.5e+02 Score=23.58 Aligned_cols=87 Identities=14% Similarity=0.206 Sum_probs=52.8
Q ss_pred HHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhh
Q 021846 189 QIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYI 268 (306)
Q Consensus 189 ~ii~esi~~Li~~~~~~~~~~~~~~~~i~i~~~s~vv~~~l~~~~~~~~s~~l~a~a~~~~~Dv~~n~~~i~~~~l~~~~ 268 (306)
-+.++-..|++.|.. +.+ ..++.+.+.++.+...+-.+..- ...+++....|..|.+.|+-.++.+++...+
T Consensus 82 DlGRDvlSRli~Gt~-~t~-----G~allvt~~a~l~g~~lGi~AG~--t~gl~s~~lnHilDt~lSiPsLLlAiivvaf 153 (296)
T COG4171 82 DLGRDVLSRLISGTA-PTV-----GGALLVTLAATICGGVLGIFAGA--THGLRSAVLNHILDTLLSIPSLLLAIIVVAF 153 (296)
T ss_pred cchHHHHHHHHccCc-ccc-----chHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 345677788888876 322 22334444444433333333221 3467888899999999998777777665544
Q ss_pred -h-hhhhHHHHHHHHHH
Q 021846 269 -D-DWMDPVGAIIVSQI 283 (306)
Q Consensus 269 -~-~~iDpi~aiiIa~~ 283 (306)
+ .....+.|+.++++
T Consensus 154 ~gpsl~namfA~~LAll 170 (296)
T COG4171 154 AGPSLSNAMFAVWLALL 170 (296)
T ss_pred cCchHHHHHHHHHHHHH
Confidence 4 35566666666654
No 40
>PRK09560 nhaA pH-dependent sodium/proton antiporter; Reviewed
Probab=23.36 E-value=7.2e+02 Score=24.47 Aligned_cols=103 Identities=21% Similarity=0.216 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhH
Q 021846 173 PLGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRAFTNEIVKAYAQDHFFDV 252 (306)
Q Consensus 173 ~l~~li~s~~m~~~~~~ii~esi~~Li~~~~~~~~~~~~~~~~i~i~~~s~vv~~~l~~~~~~~~s~~l~a~a~~~~~Dv 252 (306)
++--.++-.+|..--+.+..|-=|++..|+- .+ .......+..++.++++-...|......++...+..+.-.-+|+
T Consensus 58 sl~~wiNDgLMaiFFf~vGLEiKrE~~~GeL-s~--~r~a~lPi~AAlGGmivPAlIy~~~n~g~~~~~~GWgIPmATDI 134 (389)
T PRK09560 58 SLLHWINDGLMAVFFLLVGLEIKRELLEGQL-SS--WQQRILPAIAAVGGMVVPALIYAAFNYNNPETLRGWAIPAATDI 134 (389)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CC--hHHHHHHHHHHHhchHHHHHHHheeecCCCcccCccccccHHHH
Confidence 3344444444444444445555555666553 12 12334455666667778777777664433334678888888898
Q ss_pred HHHHHHHHHHHHHHhh---------h-hhhhHHHHHHH
Q 021846 253 ITNIIGLVAVLLANYI---------D-DWMDPVGAIIV 280 (306)
Q Consensus 253 ~~n~~~i~~~~l~~~~---------~-~~iDpi~aiiI 280 (306)
.... ++++ +++... . -..|-++|++|
T Consensus 135 AFAl-gvL~-llG~rvP~~Lr~FLlaLAIvDDlgAI~V 170 (389)
T PRK09560 135 AFAL-GVLA-LLGKRVPVSLKVFLLALAIIDDLGAIVI 170 (389)
T ss_pred HHHH-HHHH-HhcCCCCHHHHHHHHHHHHHHhhhhHhh
Confidence 8876 5554 444332 1 35676666654
No 41
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=23.16 E-value=5.1e+02 Score=22.63 Aligned_cols=8 Identities=0% Similarity=0.060 Sum_probs=3.4
Q ss_pred HHHHHHHh
Q 021846 229 LVVYCRAF 236 (306)
Q Consensus 229 l~~~~~~~ 236 (306)
-+++.||+
T Consensus 194 ~~~lkkk~ 201 (206)
T PF06570_consen 194 RFYLKKKY 201 (206)
T ss_pred HHHHHHHh
Confidence 34444443
No 42
>PF01970 TctA: Tripartite tricarboxylate transporter TctA family; InterPro: IPR002823 Members of this prokaryotic family have no known function. Members are predicted to be integral membrane proteins and are similar to a protein in a tartrate utilisation region (TAR) of Agrobacterium vitis a common pathogen of grapevine. Most grapevine strains utilise tartrate, an abundant compound in grapevine [].
Probab=22.79 E-value=7e+02 Score=24.66 Aligned_cols=25 Identities=8% Similarity=-0.036 Sum_probs=12.9
Q ss_pred HHHHHhcCCCCCCCCcchhHHHHHH
Q 021846 151 FTAFSMQTPNPYQYPIGKKRMQPLG 175 (306)
Q Consensus 151 ~~~~~~~k~~~~~~P~G~~R~E~l~ 175 (306)
++...++|.++++..||++..|-+.
T Consensus 258 lay~~~k~~sk~~e~fg~G~~~gv~ 282 (419)
T PF01970_consen 258 LAYGQAKRFSKNPEKFGKGSPEGVA 282 (419)
T ss_pred HHHHHhhhccCCccccCCCChheee
Confidence 3333344333333347888777763
No 43
>COG3965 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
Probab=22.15 E-value=4.9e+02 Score=24.45 Aligned_cols=14 Identities=21% Similarity=0.242 Sum_probs=6.9
Q ss_pred hhhhHHHHHHHHHH
Q 021846 270 DWMDPVGAIIVSQI 283 (306)
Q Consensus 270 ~~iDpi~aiiIa~~ 283 (306)
.-+||.-|++.+++
T Consensus 120 R~v~~~~ai~yt~~ 133 (314)
T COG3965 120 REVEPGHAIAYTLV 133 (314)
T ss_pred ccccccHHHHHHHH
Confidence 34555555544443
No 44
>PF06738 DUF1212: Protein of unknown function (DUF1212); InterPro: IPR010619 This entry represents a predicted domain found within a number of hypothetical proteins of unknown function found in eukaryotes, bacteria and archaea. Some of these sequences are predicted to be membrane proteins.
Probab=21.70 E-value=1.9e+02 Score=24.71 Aligned_cols=45 Identities=22% Similarity=0.311 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021846 256 IIGLVAVLLANYID-DWMDPVGAIIVSQISNSLVFSCACVHLLVFM 300 (306)
Q Consensus 256 ~~~i~~~~l~~~~~-~~iDpi~aiiIa~~i~~~~~~~~~~~~~~l~ 300 (306)
..++.++.+...++ .|.|.+.+.++++++........+.....+.
T Consensus 109 ~~~l~~~~fa~lfgg~~~~~~~a~i~g~~~~~~~~~~~r~~~~~~~ 154 (193)
T PF06738_consen 109 AAGLASAAFALLFGGSWIDMIVAFILGLLVGLLRQLLSRRRLNSFI 154 (193)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHhccchHHH
No 45
>PF09877 DUF2104: Predicted membrane protein (DUF2104); InterPro: IPR019211 This entry is found in various hypothetical archaeal proteins, has no known function.
Probab=21.05 E-value=1.4e+02 Score=23.45 Aligned_cols=20 Identities=25% Similarity=0.308 Sum_probs=16.1
Q ss_pred chhHHHHHHHHHHHHHHHHH
Q 021846 167 GKKRMQPLGILVFASVMATL 186 (306)
Q Consensus 167 G~~R~E~l~~li~s~~m~~~ 186 (306)
|++|.|...+++.+++....
T Consensus 78 GYGr~E~~iG~iiA~l~~~l 97 (99)
T PF09877_consen 78 GYGRIETVIGLIIALLIYLL 97 (99)
T ss_pred CCCeehhhhhHHHHHHHHHH
Confidence 89999999988888776543
No 46
>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion. The inclusion is nonfusogenic with lysosomes but intercepts lipids from a host cell exocytic pathway. Initiation of chlamydial development is concurrent with modification of the inclusion membrane by a set of C. trachomatis-encoded proteins collectively designated Incs. One of these Incs, IncA (Inclusion membrane protein A), is functionally associated with the homotypic fusion of inclusions [].
Probab=20.39 E-value=5.3e+02 Score=21.92 Aligned_cols=24 Identities=8% Similarity=0.361 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 021846 170 RMQPLGILVFASVMATLGLQIILE 193 (306)
Q Consensus 170 R~E~l~~li~s~~m~~~~~~ii~e 193 (306)
|+=.+..++.|+++++.|+..+.-
T Consensus 5 ~i~~i~~iilgilli~~gI~~Lv~ 28 (191)
T PF04156_consen 5 RIISIILIILGILLIASGIAALVL 28 (191)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444556666666666666554433
No 47
>COG0651 HyfB Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=20.08 E-value=9.1e+02 Score=24.39 Aligned_cols=154 Identities=12% Similarity=0.105 Sum_probs=83.3
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHhch--HHHHHhHHHH----HHHHHHHHHHH--HHHHHhcCCCCCCCCcchhHH
Q 021846 100 RSETLAIRISNVANMVLFAAKVYASVKSGS--LAIIASTLDS----LLDLLSGFILW--FTAFSMQTPNPYQYPIGKKRM 171 (306)
Q Consensus 100 ~~~r~al~isl~~Nl~l~i~kl~a~~~sgS--laLiAdalds----l~D~~s~~i~l--~~~~~~~k~~~~~~P~G~~R~ 171 (306)
+...+-++++.+...++.+.=.+..-.+|| .+-++....+ ..........+ ++.+..-.|-..-=|.=|...
T Consensus 157 ~a~~~Y~i~~~~~~~l~L~gv~lly~~tGtln~~~i~~~~~~~~~~~~~~~~~~L~ligf~~KaglfPlh~WLP~A~~~a 236 (504)
T COG0651 157 SAGFKYLILGHIGTLLLLIGVGLLYAATGTLNFADIALKLSSELDPGLGIAAFLLLLIGFGVKAGLFPLHFWLPDAHSEA 236 (504)
T ss_pred hhhhHhhhhhhHHHHHHHHHHHHHHHHhCcccHHHHHHHhhcccCchHHHHHHHHHHHHHHHhcccCchhhhhhhhhccC
Confidence 344555667777777777777777788885 4444443332 22223333333 334444344333334455555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHH----------------
Q 021846 172 QPLGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRA---------------- 235 (306)
Q Consensus 172 E~l~~li~s~~m~~~~~~ii~esi~~Li~~~~~~~~~~~~~~~~i~i~~~s~vv~~~l~~~~~~---------------- 235 (306)
.+=.+-+++.++..+|++.+..-+...+..... . .....+.+....+++++-....+.++.
T Consensus 237 p~pvSAllS~v~~k~g~y~i~ril~~~~~~~~~-~--~~~~~~l~~~~~~t~i~G~~~Al~q~d~KRlLAYsti~q~G~i 313 (504)
T COG0651 237 PSPVSALLSGVLVKVGVYGILRILYLVFPLLGG-A--YLWGNLLIALGILTILFGVLYALLQKDIKRLLAYSTVSQMGYI 313 (504)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHcCcccc-h--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555555666677777787777777666654431 0 011234444555555555555555432
Q ss_pred -----hCCH-HHHHHHHHHHHhHHHHH
Q 021846 236 -----FTNE-IVKAYAQDHFFDVITNI 256 (306)
Q Consensus 236 -----~~s~-~l~a~a~~~~~Dv~~n~ 256 (306)
..++ .+.+.-.|..++.+.-.
T Consensus 314 llg~~ig~~~~l~~ai~~~l~H~l~K~ 340 (504)
T COG0651 314 LLGLGIGTPLGLAGAIFHLLNHALVKA 340 (504)
T ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 1121 35566778888888876
Done!