Query 021847
Match_columns 306
No_of_seqs 150 out of 156
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 10:12:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021847.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021847hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qg8_A Protein (spore coat pol 92.0 0.41 1.4E-05 40.4 7.3 119 89-227 87-215 (255)
2 1xhb_A Polypeptide N-acetylgal 84.3 1.6 5.6E-05 41.1 6.3 39 89-127 113-151 (472)
3 2ffu_A Ppgalnact-2, polypeptid 74.9 2.5 8.5E-05 40.5 4.3 39 89-127 145-183 (501)
4 3bcv_A Putative glycosyltransf 72.9 2.5 8.6E-05 35.1 3.4 109 13-126 4-120 (240)
5 3f1y_A Mannosyl-3-phosphoglyce 63.9 11 0.00038 35.7 6.1 194 13-227 93-310 (387)
6 4fix_A UDP-galactofuranosyl tr 63.1 13 0.00043 37.9 6.7 37 90-126 268-305 (657)
7 2d7i_A Polypeptide N-acetylgal 59.3 13 0.00044 36.6 5.9 212 13-230 111-342 (570)
8 2z86_A Chondroitin synthase; G 57.1 3.8 0.00013 40.0 1.6 110 14-125 93-210 (625)
9 2c0n_A A197; thermophil protei 40.1 9.7 0.00033 34.2 1.4 38 79-123 45-85 (203)
10 2z86_A Chondroitin synthase; G 39.4 36 0.0012 33.1 5.4 100 13-117 374-481 (625)
11 2nxv_A ATP synthase subunits r 37.5 26 0.00088 30.2 3.7 29 89-117 73-101 (249)
12 3l7i_A Teichoic acid biosynthe 34.6 8.2 0.00028 38.9 0.0 36 89-124 82-117 (729)
13 1omz_A Alpha-1,4-N-acetylhexos 31.1 23 0.00078 33.2 2.4 104 13-118 27-134 (293)
No 1
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=92.02 E-value=0.41 Score=40.43 Aligned_cols=119 Identities=13% Similarity=-0.013 Sum_probs=67.4
Q ss_pred cCccEEEEeccccCCCCCChHHHHHHHHHh-CCcccCCCc-----CCCCCceeeeeeeeeccceecceeccCCCCCCCCC
Q 021847 89 AEYSYIFLWDEDLGVEDFNPQKYVSIVKSE-GLEISQPAL-----DPAKSEVHHQITARSQRSIVHRRTYKPGLCDKNST 162 (306)
Q Consensus 89 ~~YdYIflwDDDl~vd~f~i~ry~~ivr~~-gLeIsQPAL-----d~~~S~~sh~iT~r~~~~~vhr~~~~~~~C~~~~~ 162 (306)
+..|||++.|+|..++...+.++++.+.++ +..+..+.. +.+ +...+.. .+ +...+. .
T Consensus 87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~-~~-~~~~~~-----~-------- 150 (255)
T 1qg8_A 87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNEN-RDIVKET-VR-PAAQVT-----W-------- 150 (255)
T ss_dssp CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC----CEEEEE-EE-CCCSCB-----S--------
T ss_pred cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCC-Ccchhhc-cC-chHHHH-----H--------
Confidence 578999999999999999999999999876 666655543 222 1111110 00 100000 0
Q ss_pred CCCCcceEEEeccccchhHHHHhh-hh---hcCCCcceehhhHhhhhhhcCCCCCcEEEEeeeeEEEcc
Q 021847 163 APPCTGWIEMMAPVFSRAAWRCVW-YL---IQNDLIHAWGLDMQLGYCAQGDRTKNVGVVDAEYVVHYG 227 (306)
Q Consensus 163 ~ppct~fVEiMaPVFSR~Awrcvw-~~---iqNdLvhGWGLD~~~~~c~~~~~~~kiGVVDa~~V~H~g 227 (306)
....++-..+=+|+|++++-+- .| ...+.....+-|+.+...+.. . .++..++...+.|+.
T Consensus 151 --~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~-~-g~~~~~~~~~~~~r~ 215 (255)
T 1qg8_A 151 --NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNH-F-YPFYPLDEELDLNYI 215 (255)
T ss_dssp --CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTT-T-CCBEEEEEEEEEEEE
T ss_pred --hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHH-h-CCEEEecCcEEEEEE
Confidence 0111222234578999997664 34 111111234567666544422 2 369999998888873
No 2
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=84.30 E-value=1.6 Score=41.14 Aligned_cols=39 Identities=10% Similarity=0.066 Sum_probs=33.3
Q ss_pred cCccEEEEeccccCCCCCChHHHHHHHHHhCCcccCCCc
Q 021847 89 AEYSYIFLWDEDLGVEDFNPQKYVSIVKSEGLEISQPAL 127 (306)
Q Consensus 89 ~~YdYIflwDDDl~vd~f~i~ry~~ivr~~gLeIsQPAL 127 (306)
+..|||+|.|+|..++.--+.++++.+++..-.+.-|.+
T Consensus 113 A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~ 151 (472)
T 1xhb_A 113 SRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPII 151 (472)
T ss_dssp CCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEE
T ss_pred ccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeee
Confidence 568999999999999999999999999887655555554
No 3
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=74.92 E-value=2.5 Score=40.45 Aligned_cols=39 Identities=10% Similarity=0.173 Sum_probs=34.8
Q ss_pred cCccEEEEeccccCCCCCChHHHHHHHHHhCCcccCCCc
Q 021847 89 AEYSYIFLWDEDLGVEDFNPQKYVSIVKSEGLEISQPAL 127 (306)
Q Consensus 89 ~~YdYIflwDDDl~vd~f~i~ry~~ivr~~gLeIsQPAL 127 (306)
+..|||+|.|+|..++.-.+.++++.+++..-.+..|.+
T Consensus 145 A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~ 183 (501)
T 2ffu_A 145 AQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPII 183 (501)
T ss_dssp CCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEE
T ss_pred cCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeee
Confidence 578999999999999999999999999988777777764
No 4
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=72.92 E-value=2.5 Score=35.09 Aligned_cols=109 Identities=15% Similarity=0.046 Sum_probs=61.7
Q ss_pred CCCeeEEEEecccccccHHHHhhhcc---CCCceEEEEeecCccCcccc-cc-cc--CceeEE-EeeccchhhhhccccC
Q 021847 13 SSFSLFAIAAGIKQSDLVDKMVTKFL---SSNFSVMLFHYDGVVDQWKT-FE-WC--DRVIHV-SAANQTKWWFAKRFLH 84 (306)
Q Consensus 13 ~~k~Lv~~~VG~kqk~~v~~~v~kf~---~~~Fdv~LfhYdg~~d~w~~-~e-ws--~~aIhv-~~~~qtKww~akRflh 84 (306)
.++.-|++++= +....+...|+... ..+|.|++. =||..|+=.+ ++ +. ...|++ ...+..+ -..|..
T Consensus 4 ~p~vsViIp~y-n~~~~l~~~l~Sl~~q~~~~~eiIvv-Dd~S~d~t~~~~~~~~~~~~~i~~i~~~n~G~--~~a~N~- 78 (240)
T 3bcv_A 4 IPKVSVIVPIY-NVEKYLDQCVQALLAQTLSDIEIILI-DDESPDNCPKICDDYAAQYPNIKVIHKKNAGL--GMACNS- 78 (240)
T ss_dssp CCSEEEEEEES-SCTTTHHHHHHHHHTCSSSSEEEEEE-ECCCSSSHHHHHHHHHHHCSSEEEEECCCCCH--HHHHHH-
T ss_pred CCcEEEEEecC-CCHHHHHHHHHHHHhCcCCCeEEEEE-ECCCCcCHHHHHHHHHhhCCCEEEEECCCCCh--HHHHHH-
Confidence 35666777773 33345555555432 257888877 4676554111 10 11 112332 2222221 111110
Q ss_pred cccccCccEEEEeccccCCCCCChHHHHHHHHHhCCcccCCC
Q 021847 85 PDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSEGLEISQPA 126 (306)
Q Consensus 85 Pdiv~~YdYIflwDDDl~vd~f~i~ry~~ivr~~gLeIsQPA 126 (306)
-=-.+..|||++.|+|..++...+.++++.+++.+.++...+
T Consensus 79 g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~ 120 (240)
T 3bcv_A 79 GLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTG 120 (240)
T ss_dssp HHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC-
T ss_pred HHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEe
Confidence 001256899999999999999999999999998777766544
No 5
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=63.85 E-value=11 Score=35.71 Aligned_cols=194 Identities=12% Similarity=0.052 Sum_probs=98.1
Q ss_pred CCCeeEEEEecccccccHHHHhhhcc------CCCceEEEEeecCccCcccccc--ccCceeEEE------eeccchhhh
Q 021847 13 SSFSLFAIAAGIKQSDLVDKMVTKFL------SSNFSVMLFHYDGVVDQWKTFE--WCDRVIHVS------AANQTKWWF 78 (306)
Q Consensus 13 ~~k~Lv~~~VG~kqk~~v~~~v~kf~------~~~Fdv~LfhYdg~~d~w~~~e--ws~~aIhv~------~~~qtKww~ 78 (306)
.++..|++++=.. ..++...|+... ..+|.|++.. ||.+|+=.++. +..+.++.. ..++.|-.=
T Consensus 93 ~p~vSVVIP~yNe-~~~l~~~l~sl~~~l~~~~~~~EIIVVD-DgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G~g~A 170 (387)
T 3f1y_A 93 GLTVSAVLPSRNV-ADTVGGIIDEIHALNERAPLIDQILVVD-ADSEDGTAGVAASHGAEVYSENELMSGYGDAHGKGDA 170 (387)
T ss_dssp TCCEEEEEEESSC-TTTHHHHHHHHHHHHHHSCCCSEEEEEE-CSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCSHHHH
T ss_pred CCeEEEEEEcCCC-HHHHHHHHHHHHHHHhcCCCCeEEEEEc-CcCCccHHHHHHHhCchhcccceeEecCCccCCHHHH
Confidence 4678888988544 456666665442 2478887774 77766532211 112222210 012223111
Q ss_pred hccccCcccccCccEEEEeccccC-CCCCChHHHHHHHHHh-CCcccCCCcCCCCCceeeeeeeeeccceecce----ec
Q 021847 79 AKRFLHPDIVAEYSYIFLWDEDLG-VEDFNPQKYVSIVKSE-GLEISQPALDPAKSEVHHQITARSQRSIVHRR----TY 152 (306)
Q Consensus 79 akRflhPdiv~~YdYIflwDDDl~-vd~f~i~ry~~ivr~~-gLeIsQPALd~~~S~~sh~iT~r~~~~~vhr~----~~ 152 (306)
.+.=+ -.+.+|||++.|.|.. ++...+.++++.+.+. +..+........ ........ +.....+-+. ..
T Consensus 171 ~n~G~---~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~-~~~~~~~~-~~~~g~v~~~~~~~l~ 245 (387)
T 3f1y_A 171 MWRAL---SVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRP-FRKGESIE-EDGGGRVTELTAKPLF 245 (387)
T ss_dssp HHHHT---TTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC--------C-CBCCSHHHHHTHHHHH
T ss_pred HHHHH---HhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccc-cccccccc-cccCCchhhhhHHHHH
Confidence 11001 1257999999999999 8999999999988765 565554432211 00000110 1101111000 00
Q ss_pred c---CCCCCCCCCCCCCcceEEEeccccchhHHHHhhhhhcCCCcceehhhHhhh-hhhcCCCCCcEEEEeeeeEEEcc
Q 021847 153 K---PGLCDKNSTAPPCTGWIEMMAPVFSRAAWRCVWYLIQNDLIHAWGLDMQLG-YCAQGDRTKNVGVVDAEYVVHYG 227 (306)
Q Consensus 153 ~---~~~C~~~~~~ppct~fVEiMaPVFSR~Awrcvw~~iqNdLvhGWGLD~~~~-~c~~~~~~~kiGVVDa~~V~H~g 227 (306)
. +..+ .. .-+.+||. +|+|++++-+ .| ..|||.|..+- +++....-++|.=|+-.+..|..
T Consensus 246 ~~~~~~l~--~~-~d~~sG~~-----a~rR~~l~~i-~f-----~~gyg~e~ell~~~~~~~G~~~I~eVpi~~~~h~~ 310 (387)
T 3f1y_A 246 NLFYPELA--GF-VQPLAGEF-----VADRELFCSI-PF-----LTGYAVETGIMIDVLKKVGLGAMAQVDLGERQNRH 310 (387)
T ss_dssp HHHCGGGT--TC-SCTTCSCE-----EEEHHHHTTS-CE-----ECSTTHHHHHHHHHHHHHCGGGEEEEEEEECCCCC
T ss_pred HHHhHhhc--cc-cccccccE-----EEEHHHHHhC-CC-----CCCcchHHHHHHHHHHhcCCCeEEEEecceeecCC
Confidence 0 0000 01 11233432 6899999765 22 37899986663 33221112358888888877763
No 6
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=63.07 E-value=13 Score=37.92 Aligned_cols=37 Identities=11% Similarity=0.170 Sum_probs=30.9
Q ss_pred CccEEEEeccccCCCCCChHHHHHHHHHh-CCcccCCC
Q 021847 90 EYSYIFLWDEDLGVEDFNPQKYVSIVKSE-GLEISQPA 126 (306)
Q Consensus 90 ~YdYIflwDDDl~vd~f~i~ry~~ivr~~-gLeIsQPA 126 (306)
.+|||+|.|+|..++...+.++++.++.. ...+..|.
T Consensus 268 ~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~ 305 (657)
T 4fix_A 268 DCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQ 305 (657)
T ss_dssp CCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEE
T ss_pred CCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeE
Confidence 68999999999999999999999999876 34455554
No 7
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=59.28 E-value=13 Score=36.57 Aligned_cols=212 Identities=11% Similarity=0.039 Sum_probs=97.8
Q ss_pred CCCeeEEEEeccccccc----HHHHhhhccCCC--ceEEEEeecCccCcc-cc-cc-cc--CceeEEEeeccchhhhhcc
Q 021847 13 SSFSLFAIAAGIKQSDL----VDKMVTKFLSSN--FSVMLFHYDGVVDQW-KT-FE-WC--DRVIHVSAANQTKWWFAKR 81 (306)
Q Consensus 13 ~~k~Lv~~~VG~kqk~~----v~~~v~kf~~~~--Fdv~LfhYdg~~d~w-~~-~e-ws--~~aIhv~~~~qtKww~akR 81 (306)
.++.-|++++=...... ++.+++.- ..+ |.|+|+ =||..|+- .+ ++ +. ...|++.......-.-.-|
T Consensus 111 ~P~vSVIIp~yNe~~~~L~~~L~Sll~qt-~~~~~~EIIVV-DDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n~G~~~A~ 188 (570)
T 2d7i_A 111 LPNTSIIIPFHNEGWSSLLRTVHSVLNRS-PPELVAEIVLV-DDFSDREHLKKPLEDYMALFPSVRILRTKKREGLIRTR 188 (570)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHS-CGGGEEEEEEE-ECSCCCGGGTHHHHHHHTTSTTEEEEECSSCCCHHHHH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHhcC-CccCcEEEEEE-ECCCCcHHHHHHHHHHHHhCCeEEEEECCCCCCHHHHH
Confidence 46677788875544233 34444432 233 477776 46665543 11 11 10 1134433222111100000
Q ss_pred ccCcccccCccEEEEeccccCCCCCChHHHHHHHHHhCCcccCCCcCCC-CCceeeeee----eeec-cceec-ceeccC
Q 021847 82 FLHPDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSEGLEISQPALDPA-KSEVHHQIT----ARSQ-RSIVH-RRTYKP 154 (306)
Q Consensus 82 flhPdiv~~YdYIflwDDDl~vd~f~i~ry~~ivr~~gLeIsQPALd~~-~S~~sh~iT----~r~~-~~~vh-r~~~~~ 154 (306)
..-=-.+..|||+|.|+|..++...+.++++.+++..--+..|.++.- ...+.+... .+.. ...+. ++....
T Consensus 189 -N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (570)
T 2d7i_A 189 -MLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIP 267 (570)
T ss_dssp -HHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEECCC
T ss_pred -HHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccccccccc
Confidence 000012568999999999999999999999999876544444443210 001111100 0000 00000 000000
Q ss_pred CC-CCCCCCCCCCcceEEEeccccchhHHHHhhhhhcCCCccee-hhhHhhhhhhcCCCCCcEEEEeeeeEEEccccC
Q 021847 155 GL-CDKNSTAPPCTGWIEMMAPVFSRAAWRCVWYLIQNDLIHAW-GLDMQLGYCAQGDRTKNVGVVDAEYVVHYGRPT 230 (306)
Q Consensus 155 ~~-C~~~~~~ppct~fVEiMaPVFSR~Awrcvw~~iqNdLvhGW-GLD~~~~~c~~~~~~~kiGVVDa~~V~H~g~Pt 230 (306)
.. -......+--+.++-..+=+|+|+++.-+=.|- .. ...| |=|+-+..-+. ..+.+|.++....|.|..+..
T Consensus 268 ~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfD-e~-~~~~g~ED~dl~~Rl~-~~G~~i~~~p~~~v~H~~r~~ 342 (570)
T 2d7i_A 268 PELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYD-PG-LEIWGGEQYEISFKVW-MCGGRMEDIPCSRVGHIYRKY 342 (570)
T ss_dssp TTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSC-TT-CCSSSSHHHHHHHHHH-HTTCEEEEEEEEEEEECCCSS
T ss_pred hhhhccCCCcceecccccceEEEEEHHHHHhcCCCC-Cc-ccccCcchHHHHHHHH-hCCCeEEEccCeEEEEEcccc
Confidence 00 000001111111222223468899998663332 22 3556 44544432221 124689999999999975544
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=57.07 E-value=3.8 Score=40.00 Aligned_cols=110 Identities=12% Similarity=0.167 Sum_probs=58.2
Q ss_pred CCeeEEEEecccccccHHHHhhhcc----CCCceEEEEeecCccCcccc-cc-ccC-ceeEEEeeccchhhhhccccCcc
Q 021847 14 SFSLFAIAAGIKQSDLVDKMVTKFL----SSNFSVMLFHYDGVVDQWKT-FE-WCD-RVIHVSAANQTKWWFAKRFLHPD 86 (306)
Q Consensus 14 ~k~Lv~~~VG~kqk~~v~~~v~kf~----~~~Fdv~LfhYdg~~d~w~~-~e-ws~-~aIhv~~~~qtKww~akRflhPd 86 (306)
++.-|++++=. ....+...|.... ..++.|++.. ||..|+=.+ ++ +.. ..+++........-.+.-.-.-=
T Consensus 93 p~vsviIp~~n-~~~~l~~~l~sl~~q~~~~~~eiivvD-d~s~d~t~~~~~~~~~~~~i~~i~~~~~~~g~~~a~N~g~ 170 (625)
T 2z86_A 93 DGLSIVIPTYN-RAKILAITLACLCNQKTIYDYEVIVAD-DGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLGL 170 (625)
T ss_dssp CCEEEEEEESS-CHHHHHHHHHHHHTCCCSSCEEEEEEE-ESCSSCHHHHHHTTTTTSCEEEEEECCCSCCHHHHHHHHH
T ss_pred CcEEEEEecCC-cHHHHHHHHHHHHhhccCCCeEEEEEe-CCCchhHHHHHHHhhhcCCeEEEEeCCCCcchhHHHHHHH
Confidence 45567777643 3344555555432 1378888875 666554221 11 111 12333222211100000000000
Q ss_pred cccCccEEEEeccccCCCCCChHHHHHHHHHhC-CcccCC
Q 021847 87 IVAEYSYIFLWDEDLGVEDFNPQKYVSIVKSEG-LEISQP 125 (306)
Q Consensus 87 iv~~YdYIflwDDDl~vd~f~i~ry~~ivr~~g-LeIsQP 125 (306)
-.+.+|||++.|+|..++...+.++++.+.+.. .-+.+|
T Consensus 171 ~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~ 210 (625)
T 2z86_A 171 RAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGP 210 (625)
T ss_dssp HHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECC
T ss_pred HhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEe
Confidence 125799999999999999999999999998743 334444
No 9
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=40.13 E-value=9.7 Score=34.25 Aligned_cols=38 Identities=21% Similarity=0.431 Sum_probs=28.0
Q ss_pred hccccCcccccCccEEEEeccc---cCCCCCChHHHHHHHHHhCCccc
Q 021847 79 AKRFLHPDIVAEYSYIFLWDED---LGVEDFNPQKYVSIVKSEGLEIS 123 (306)
Q Consensus 79 akRflhPdiv~~YdYIflwDDD---l~vd~f~i~ry~~ivr~~gLeIs 123 (306)
+.+||- -..|||+++.|-| ++.+..++-|++ +.|.+|.
T Consensus 45 v~~Fl~---~~~~dhllfIDAD~~~I~FdPe~V~rLl----~~g~DVV 85 (203)
T 2c0n_A 45 LDMFLE---MKDYDTLAFLDEDVVPIEIDFQKVEAKF----NEGYDVV 85 (203)
T ss_dssp HHHHHH---CTTCCEEEEECTTEEEEECCHHHHHHHH----HHTCSEE
T ss_pred HHHHHh---cCCCCEEEEEeCCCCccccCHHHHHHHH----hCCCCEE
Confidence 445552 1369999999999 998888888888 4555554
No 10
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=39.37 E-value=36 Score=33.05 Aligned_cols=100 Identities=16% Similarity=0.099 Sum_probs=54.1
Q ss_pred CCCeeEEEEecccccccHHHHhhhcc---CCCceEEEEeecCccCcccc-cc-c--cCceeE-EEeeccchhhhhccccC
Q 021847 13 SSFSLFAIAAGIKQSDLVDKMVTKFL---SSNFSVMLFHYDGVVDQWKT-FE-W--CDRVIH-VSAANQTKWWFAKRFLH 84 (306)
Q Consensus 13 ~~k~Lv~~~VG~kqk~~v~~~v~kf~---~~~Fdv~LfhYdg~~d~w~~-~e-w--s~~aIh-v~~~~qtKww~akRflh 84 (306)
.++.-|++++ ++....+...|+... -.+|.|++.. ||.+|+=.+ ++ + ....|+ +...+..+---...-+
T Consensus 374 ~~~vsiii~~-yn~~~~l~~~l~s~~~q~~~~~eiivvd-d~S~d~t~~~~~~~~~~~~~i~~~~~~n~G~~~a~n~g~- 450 (625)
T 2z86_A 374 VPLVSIYIPA-YNCSKYIVRCVESALNQTITDLEVCICD-DGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASNTAV- 450 (625)
T ss_dssp SCSEEEEEEE-SSCTTTHHHHHHHHHSSSCCSEEEEEEE-ESCSSSHHHHHHHHHTTCTTEEEEEECCCCHHHHHHHHH-
T ss_pred CCeEEEEEeC-CCCHHHHHHHHHHHHhCcCCCeEEEEEE-CcCChhHHHHHHHHHhhCCcEEEEeCCCCCHHHHHHHHH-
Confidence 3456666666 344455566555432 2578888775 565554111 11 1 011233 2323322211000000
Q ss_pred cccccCccEEEEeccccCCCCCChHHHHHHHHH
Q 021847 85 PDIVAEYSYIFLWDEDLGVEDFNPQKYVSIVKS 117 (306)
Q Consensus 85 Pdiv~~YdYIflwDDDl~vd~f~i~ry~~ivr~ 117 (306)
-.+..|||++.|+|..++...++++++.+.+
T Consensus 451 --~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~ 481 (625)
T 2z86_A 451 --RLCRGFYIGQLDSDDFLEPDAVELCLDEFRK 481 (625)
T ss_dssp --HHCCSSEEEECCTTCEECTTHHHHHHHHHHH
T ss_pred --HhcCCCEEEEECCCcccChhHHHHHHHHHHh
Confidence 1257899999999999988888888887754
No 11
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=37.52 E-value=26 Score=30.21 Aligned_cols=29 Identities=17% Similarity=0.338 Sum_probs=26.7
Q ss_pred cCccEEEEeccccCCCCCChHHHHHHHHH
Q 021847 89 AEYSYIFLWDEDLGVEDFNPQKYVSIVKS 117 (306)
Q Consensus 89 ~~YdYIflwDDDl~vd~f~i~ry~~ivr~ 117 (306)
+..|||+|.|.|..++.-.++++++.+++
T Consensus 73 A~g~yl~fln~D~~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 73 CKGRYVIFCHEDVELVDRGYDDLVAAIEA 101 (249)
T ss_dssp CCSSEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred cCCCEEEEECCCcccCccHHHHHHHHHHh
Confidence 56899999999999999999999999887
No 12
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=34.65 E-value=8.2 Score=38.90 Aligned_cols=36 Identities=17% Similarity=0.251 Sum_probs=0.0
Q ss_pred cCccEEEEeccccCCCCCChHHHHHHHHHhCCcccC
Q 021847 89 AEYSYIFLWDEDLGVEDFNPQKYVSIVKSEGLEISQ 124 (306)
Q Consensus 89 ~~YdYIflwDDDl~vd~f~i~ry~~ivr~~gLeIsQ 124 (306)
+..|||++.|+|-.++...++++++.+...++-++.
T Consensus 82 A~gdyI~flD~Dd~~~p~~l~~l~~~l~~~d~v~~~ 117 (729)
T 3l7i_A 82 VETPYFMFLDADDELASYAITFYLEKFNNTDGLIAP 117 (729)
T ss_dssp ------------------------------------
T ss_pred ccCCEEEEECCCCCCChhHHHHHHHHhcCCCEEEEe
Confidence 578999999999999998899998888744444433
No 13
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=31.06 E-value=23 Score=33.18 Aligned_cols=104 Identities=13% Similarity=0.095 Sum_probs=61.3
Q ss_pred CCCeeEEEEecccccccHHHHhhhcc-CCCceEEEEeecCccCccccccccC---ceeEEEeeccchhhhhccccCcccc
Q 021847 13 SSFSLFAIAAGIKQSDLVDKMVTKFL-SSNFSVMLFHYDGVVDQWKTFEWCD---RVIHVSAANQTKWWFAKRFLHPDIV 88 (306)
Q Consensus 13 ~~k~Lv~~~VG~kqk~~v~~~v~kf~-~~~Fdv~LfhYdg~~d~w~~~ews~---~aIhv~~~~qtKww~akRflhPdiv 88 (306)
..++=|+|-+-.+ .....+.|+... .+.-+=++..+-+.....-+..|.. .++.|....+.+==+-.||+..+.
T Consensus 27 ~~~FTvvi~ty~R-~~~L~~lv~~~~~~~~v~~IvVvWn~~~~~pp~~~~~~~~~~~vpv~v~~~~~nsLnnRF~p~~~- 104 (293)
T 1omz_A 27 LDSFTLIMQTYNR-TDLLLRLLNHYQAVPSLHKVIVVWNNVGEKGPEELWNSLGPHPIPVIFKPQTANKMRNRLQVFPE- 104 (293)
T ss_dssp TTCEEEEEEESSC-HHHHHHHHHHHTTSTTEEEEEEEECCTTCCCTHHHHHHTCCCSSCEEEEECSSCCGGGGGSCCTT-
T ss_pred CCceEEEEEeecc-cHHHHHHHHHHhcCCCCCeEEEEeCCCCCCCChhhccccCCCCccEEEEeCCCCchhhccCCCcc-
Confidence 3455555544432 333445554332 3455556666655322222333422 234454555544446788874433
Q ss_pred cCccEEEEeccccCCCCCChHHHHHHHHHh
Q 021847 89 AEYSYIFLWDEDLGVEDFNPQKYVSIVKSE 118 (306)
Q Consensus 89 ~~YdYIflwDDDl~vd~f~i~ry~~ivr~~ 118 (306)
-+-|.||..|||+.++..+++.=|++-+++
T Consensus 105 i~T~AVLslDDDv~l~~~el~faF~vWr~~ 134 (293)
T 1omz_A 105 VETNAVLMVDDDTLISAQDLVFAFSIWQQF 134 (293)
T ss_dssp CCSSEEEEECTTEEECHHHHHHHHHHHTTS
T ss_pred CCcCEEEEEcCCCCCCHHHHHHHHHHHHHC
Confidence 458999999999999999999988888754
Done!