Your job contains 1 sequence.
>021849
MNYAIPLYQCRKDEASGKVQFSCTVEIGDIRYIGGAAKTKKEAEIKAARTALLAIQSSAS
ELSGNSAGNTQLTVLPSRKRGPEVANNPEETVNVPKAKKGRFKKKILKMKRPGGRMDRTQ
LQNTGNMENINASQEGSKVSQANTSGIQGVSTEVLAVEGTMDCQEGRSEIEPIEREMPAV
NDALPHHIGGDSETIHSAATHCSDRSSNEASEMGTSSLAKEVNEVTPGVGTSSVSCHTTA
LAKEVNEGTPNEGTSTALTEEVNEPSGIMEAASMTNNSTLGQIESSCVIPGINQPEERIQ
AGTSQA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021849
(306 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2024407 - symbol:HYL1 "HYPONASTIC LEAVES 1" sp... 251 4.4e-21 1
UNIPROTKB|Q0IQN6 - symbol:DRB8 "Double-stranded RNA-bindi... 196 1.2e-13 1
>TAIR|locus:2024407 [details] [associations]
symbol:HYL1 "HYPONASTIC LEAVES 1" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;IDA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0009735 "response to
cytokinin stimulus" evidence=IMP] [GO:0009737 "response to abscisic
acid stimulus" evidence=IMP] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA;IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0035279 "mRNA cleavage involved
in gene silencing by miRNA" evidence=IMP] [GO:0031054 "pre-miRNA
processing" evidence=IMP] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA;IMP] [GO:0015030 "Cajal
body" evidence=IDA] [GO:0035198 "miRNA binding" evidence=IDA]
[GO:0010445 "nuclear dicing body" evidence=IDA] [GO:0051607
"defense response to virus" evidence=RCA] [GO:0010305 "leaf
vascular tissue pattern formation" evidence=IMP] [GO:0010589 "leaf
proximal/distal pattern formation" evidence=IMP] InterPro:IPR001159
Pfam:PF00035 PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0009735
GO:GO:0009733 Gene3D:3.30.160.20 GO:GO:0003725 GO:GO:0035198
GO:GO:0035279 GO:GO:0031054 GO:GO:0010267 GO:GO:0010305
EMBL:AC000132 EMBL:AF276440 EMBL:AY054631 EMBL:AY081525
EMBL:AK319123 IPI:IPI00525041 IPI:IPI00975255 PIR:H86230
RefSeq:NP_563850.1 UniGene:At.10223 PDB:2L2M PDB:2L2N PDB:3ADG
PDB:3ADI PDB:3ADJ PDBsum:2L2M PDBsum:2L2N PDBsum:3ADG PDBsum:3ADI
PDBsum:3ADJ ProteinModelPortal:O04492 SMR:O04492 DIP:DIP-33453N
IntAct:O04492 STRING:O04492 PaxDb:O04492 PRIDE:O04492
EnsemblPlants:AT1G09700.1 GeneID:837498 KEGG:ath:AT1G09700
TAIR:At1g09700 eggNOG:NOG237225 InParanoid:O04492 OMA:CMNGLKE
ProtClustDB:CLSN2916994 EvolutionaryTrace:O04492
Genevestigator:O04492 GO:GO:0010445 GO:GO:0010589 Uniprot:O04492
Length = 419
Score = 251 (93.4 bits), Expect = 4.4e-21, P = 4.4e-21
Identities = 99/307 (32%), Positives = 137/307 (44%)
Query: 1 MNYAIPLYQCRKDEASGKV-QFSCTVEIGDIRYXXXXXXXXXXXXXXXXXXXLLAIQSSA 59
MNYAIPLYQC+K E G+V QF+CTVEIG I+Y LLAIQS
Sbjct: 113 MNYAIPLYQCQKVETLGRVTQFTCTVEIGGIKYTGAATRTKKDAEISAGRTALLAIQSDT 172
Query: 60 SELSGNSAGNTQLTVLPSRKRGPEVANNPEETVNVPKAKKGRFKKKILKMKRPGGRMDRT 119
N NTQLTVLP K+ + A +ETV KA+K +FKKK K KR +
Sbjct: 173 KNNLANY--NTQLTVLPCEKKTIQAAIPLKETVKTLKARKAQFKKKAQKGKRTVAKNPED 230
Query: 120 QL---QNTGNMENINASQEGSKVSQANTSGIQGVSTEVLAVEGTMDCQEGRSEIEPIERE 176
+ Q T + +N + + + + +S + G+ A G+++ + + E P E
Sbjct: 231 IIIPPQPTDHCQNDQSEKIETTPNLEPSSCMNGLKE---AAFGSVETE--KIETTP-NLE 284
Query: 177 MPAVNDALPHHIGGDSETIHSAATHCSDRSS--NEASEMGTSSLAKEVNEVTPGVGTSSV 234
P+ + L G ET T + S N E S+ E E TP + SS
Sbjct: 285 PPSCMNGLKEAAFGSVETEKIETTPNLEPPSCMNGLKEAAFGSVETEKIETTPNLEPSS- 343
Query: 235 SCHTTALAKEVNEGTPNEGTSTALTEEVNEPS---GIMEAA--SMTNNS--TLGQIESSC 287
C L KE G+ E T + PS G+ EAA S+ T +ESS
Sbjct: 344 -C-MNGL-KEAAFGSV-ETEKIETTPNLEPPSCMNGLKEAAFGSVETEKIETTPNLESSS 399
Query: 288 VIPGINQ 294
+ G+ +
Sbjct: 400 CMSGLKE 406
>UNIPROTKB|Q0IQN6 [details] [associations]
symbol:DRB8 "Double-stranded RNA-binding protein 8"
species:39947 "Oryza sativa Japonica Group" [GO:0003725
"double-stranded RNA binding" evidence=IDA] InterPro:IPR001159
InterPro:IPR011907 Pfam:PF00035 PROSITE:PS50137 SMART:SM00358
InterPro:IPR014720 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
GO:GO:0016075 EMBL:AP008218 GO:GO:0004525 EMBL:AB036988
EMBL:DQ009988 RefSeq:NP_001065960.1 UniGene:Os.3740
EnsemblPlants:LOC_Os12g01916.1 GeneID:4351288
KEGG:dosa:Os12t0109900-02 KEGG:osa:4351288 Gramene:Q0IQN6
HOGENOM:HOG000119022 OMA:TPKPLKV ProtClustDB:CLSN2695502
PANTHER:PTHR11207 Uniprot:Q0IQN6
Length = 424
Score = 196 (74.1 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 56/151 (37%), Positives = 74/151 (49%)
Query: 1 MNYAIPLYQCRKDEASGKVQFSCTVEIGDIRYXXXXXXXXXXXXXXXXXXXLLAIQSSAS 60
MNYAIP Y C K ASG F CTVEIG I+Y LLAIQ S
Sbjct: 130 MNYAIPSYICTKS-ASGLAPFICTVEIGGIQYIGAAARTKKDAEIKAARTALLAIQGQ-S 187
Query: 61 ELSGNSAGNTQLTVLPSRKRGPEVANNPEETVNVPKAKKGRFKKKILK---MKRPGGRMD 117
E S N A T+ V+P ++ G EV P ET K KKG FKKK K MK+ G +D
Sbjct: 188 EGSANGA--TKYIVVPGKRVGKEVEKRPIETPKPLKVKKGGFKKKWNKRKFMKKDGQAVD 245
Query: 118 --RTQLQNTGNMENINASQEGSKVSQANTSG 146
+ + + G+ + + + + ++Q + G
Sbjct: 246 VEKDEARVAGDAHDSDVLMQPTVITQEASCG 276
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.305 0.122 0.332 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 306 287 0.00087 115 3 11 23 0.38 35
33 0.43 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 572 (61 KB)
Total size of DFA: 170 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.66u 0.12s 25.78t Elapsed: 00:00:01
Total cpu time: 25.66u 0.12s 25.78t Elapsed: 00:00:01
Start: Fri May 10 15:25:34 2013 End: Fri May 10 15:25:35 2013