BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021850
(306 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P38821|DNPEP_YEAST Aspartyl aminopeptidase 4 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=APE4 PE=1 SV=1
Length = 490
Score = 37.7 bits (86), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 15/117 (12%)
Query: 105 YGYVWWKGWKLPDMMFATRRSLSDA--CNSVARQLEDVYSSISAAQRQLSSKITSVDRDV 162
YG W W D+ A R + DA S+AR ++ ++ ++ + +DRDV
Sbjct: 124 YGGAIWHSWFDKDLGVAGRVFVKDAKTGKSIARLVD-----LNRPLLKIPTLAIHLDRDV 178
Query: 163 NKIVEISQATQ--------EEVTILRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQ 211
N+ E ++ TQ E+ T + ++ EF S++ IVQ ++L+ + K+
Sbjct: 179 NQKFEFNRETQLLPIGGLQEDKTEAKTEKEINNGEFTSIKTIVQRHHAELLGLIAKE 235
>sp|Q076A3|MYH13_CANFA Myosin-13 OS=Canis familiaris GN=MYH13 PE=3 SV=1
Length = 1940
Score = 34.3 bits (77), Expect = 1.1, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 119 MFATRRSLSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTI 178
+ A +RSL D C+S+ R ++D+ +++ +++ + + V + E A +E ++
Sbjct: 940 LVAKKRSLEDKCSSLKRDIDDLELTLTKVEKEKH----ATENKVKNLSEEMTALEENISK 995
Query: 179 LRGRSKLIGDEFQSVRDIVQTLESKL 204
L K + + Q D +Q E K+
Sbjct: 996 LTKEKKSLQEAHQQALDDLQVEEDKV 1021
>sp|Q1CRC2|SYS_HELPH Serine--tRNA ligase OS=Helicobacter pylori (strain HPAG1) GN=serS
PE=3 SV=1
Length = 415
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 10/64 (15%)
Query: 179 LRGRSKLIGDEFQSVRDIVQTLESKLIEIEGKQDITT-----LGVK-----KLCDRAREL 228
L+ R+ +GDE + +R+++ + +LIE+EG Q G+K D +EL
Sbjct: 18 LKKRNHAMGDELERLREVITHYKKQLIELEGLQAFQNKVSKEFGIKMAQKVDTSDLKKEL 77
Query: 229 ENGR 232
EN +
Sbjct: 78 ENNK 81
>sp|O22267|CKI1_ARATH Histidine kinase CKI1 OS=Arabidopsis thaliana GN=CKI1 PE=1 SV=1
Length = 1122
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 71 ELSHVP-RSVIIETSSGSGTGAK------KYGVIVVIVAVGYGYVWWKGWKLPDMMFATR 123
E+S VP R ++ + G T K KY +IVV++ +G+G+ W W MM ATR
Sbjct: 314 EVSGVPLRYTLMFPNKGGATRIKHQAEKAKYQLIVVMIFLGFGWPVWFVWF---MMQATR 370
Query: 124 RSL 126
R +
Sbjct: 371 REM 373
>sp|O60861|GAS7_HUMAN Growth arrest-specific protein 7 OS=Homo sapiens GN=GAS7 PE=1 SV=3
Length = 476
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 135 RQLEDVYSSISAAQRQLSSKITSVDRDVNKI-VEISQATQEEVTILRGRSKLIGDEFQSV 193
+QL Y+S+ A++ L+ + ++ ++ +++S T+E++ R +S GD+
Sbjct: 327 KQLASRYASVEKARKALTERQRDLEMKTQQLEIKLSNKTEEDIKKARRKSTQAGDDLMRC 386
Query: 194 RDIVQTLESKLIEIEGKQDITTLGVKKL 221
D+ +SK E + TTL +++L
Sbjct: 387 VDLYNQAQSKWFE---EMVTTTLELERL 411
>sp|Q9CNC4|LST_PASMU CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,
3-sialyltransferase OS=Pasteurella multocida (strain
Pm70) GN=lst PE=3 SV=1
Length = 308
Score = 33.1 bits (74), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 36 GTLKIV-SKLIKQDDPGPSDRKLFNDLLAEVSSVQ--QELSHVPRSV 79
GT+ IV + L QDDP RKL N LL S+Q + LSH ++
Sbjct: 113 GTINIVPNSLFYQDDPATLQRKLINVLLGNKYSIQSLRALSHTHYTI 159
>sp|Q8IBG1|DYHC1_PLAF7 Dynein heavy chain-like protein MAL7P1.162 OS=Plasmodium falciparum
(isolate 3D7) GN=MAL7P1.162 PE=2 SV=2
Length = 4985
Score = 32.7 bits (73), Expect = 3.1, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 145 SAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRDIVQTLESKL 204
S A L+ + SV +N I+E Q ++E+ L+ +K+ D++ RDI+ LE KL
Sbjct: 3587 SRAAGPLAKWVESVITFLN-ILETVQPLEKEIEKLQEETKVAEDQYNEQRDIICELEKKL 3645
Query: 205 IE 206
++
Sbjct: 3646 VQ 3647
>sp|Q60780|GAS7_MOUSE Growth arrest-specific protein 7 OS=Mus musculus GN=Gas7 PE=1 SV=1
Length = 421
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 135 RQLEDVYSSISAAQRQLSSKITSVDRDVNKI-VEISQATQEEVTILRGRSKLIGDEFQSV 193
+QL Y+S+ A++ L+ + ++ ++ +++S T+E++ R +S GD+
Sbjct: 272 KQLASRYASVEKARKALTERQKDLEMKTQQLEIKLSNKTEEDIKKARRKSTQAGDDLMRC 331
Query: 194 RDIVQTLESKLIE 206
D+ +SK E
Sbjct: 332 VDLYNQAQSKWFE 344
>sp|Q5T9S5|CCD18_HUMAN Coiled-coil domain-containing protein 18 OS=Homo sapiens GN=CCDC18
PE=2 SV=1
Length = 1454
Score = 32.7 bits (73), Expect = 3.5, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 124 RSLSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRS 183
+ L D LE+ Y++I +L ++ +++E+ QA +E L+ R+
Sbjct: 965 QELRDVLQKAQLSLEEKYTTIKDLTAELRECKMEIEDKKQELLEMDQALKERNWELKQRA 1024
Query: 184 KLIGDEFQSVRDIVQTLESKLIEIEGKQDITTLGVKKLCDRARELENGR 232
+ ++R+ +E K+I++EG + + L +K+ C++ E N +
Sbjct: 1025 AQVTHLDMTIREHRGEMEQKIIKLEGTLEKSELELKE-CNKQIESLNDK 1072
>sp|P40806|PKSJ_BACSU Polyketide synthase PksJ OS=Bacillus subtilis (strain 168) GN=pksJ
PE=1 SV=3
Length = 5043
Score = 31.6 bits (70), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 27/181 (14%)
Query: 20 VLAKEGRLSSVSDAVGGTLKIVSKLIKQDDPGPSDRKLFNDLLAEVSSVQQELSHVPRSV 79
L K+ LS + AV GT + V+ L Q+ DL AEVSS + P +
Sbjct: 3972 FLTKQWSLSPIGSAVPGT-RTVAILCCQETA---------DLAAEVSS------YFPNHL 4015
Query: 80 IIETS----SGSGTGAKKYGVIVVIVAVGY---GYVWWKGWKLPDMMFATRRSLSDACNS 132
+I+ S S K++ +V ++ G+ G + W W + F + L C
Sbjct: 4016 LIDVSRIENDQSDIDWKEFDGLVDVIGCGWDDEGRLDWIEWVQRLVEFGHKEGLRLLC-- 4073
Query: 133 VARQLEDV-YSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQ 191
V + LE +S+ A + + + + ++ EEVT R +KLI DEF
Sbjct: 4074 VTKGLESFQNTSVRMAGASRAGLYRMLQCEYSHLIS-RHMDAEEVTDHRRLAKLIADEFY 4132
Query: 192 S 192
S
Sbjct: 4133 S 4133
>sp|Q99323|MYSN_DROME Myosin heavy chain, non-muscle OS=Drosophila melanogaster GN=zip PE=1
SV=2
Length = 2057
Score = 31.6 bits (70), Expect = 8.3, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 123 RRSLSDACNSVARQLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGR 182
R L + C + ++ E++ + + A+ + S+ + S +++ E Q +EE G
Sbjct: 1359 RSELQEKCTKLQQEAENITNQLEEAELKASAAVKSASNMESQLTEAQQLLEEETRQKLGL 1418
Query: 183 S---KLIGDEFQSVRDIVQ-------TLESKLIEIEGKQDITTLGVKKLCDRARELENGR 232
S + I E +++++ ++ E KL E+ + ++ D A+ELE G+
Sbjct: 1419 SSKLRQIESEKEALQEQLEEDDEAKRNYERKLAEVTTQMQEIKKKAEEDADLAKELEEGK 1478
>sp|Q02224|CENPE_HUMAN Centromere-associated protein E OS=Homo sapiens GN=CENPE PE=1 SV=2
Length = 2701
Score = 31.6 bits (70), Expect = 8.6, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 21/94 (22%)
Query: 136 QLEDVYSSISAAQRQLSSKITSVDRDVNKIVEISQATQEEVTILRGRSKLIGDEFQSVRD 195
+L+ + S+ A + QL + D+ + +E++ QEE+ +L+GDE + ++
Sbjct: 1054 ELQQMLESVIAEKEQLKT-------DLKENIEMTIENQEEL-------RLLGDELKKQQE 1099
Query: 196 IVQTLESKLIEIEGKQDITTLGVKKLCDRARELE 229
IV ++ I+ EG+ + + CDR E+E
Sbjct: 1100 IVAQEKNHAIKKEGE-------LSRTCDRLAEVE 1126
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,830,269
Number of Sequences: 539616
Number of extensions: 3908558
Number of successful extensions: 14797
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 14729
Number of HSP's gapped (non-prelim): 149
length of query: 306
length of database: 191,569,459
effective HSP length: 117
effective length of query: 189
effective length of database: 128,434,387
effective search space: 24274099143
effective search space used: 24274099143
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)