Your job contains 1 sequence.
>021854
MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD
YIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFPEEARDAVLVTDGDSDIGQMVILSLI
VKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAGS
LKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTP
GGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKKCFSRL
MEKTGK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021854
(306 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2030270 - symbol:AT1G72640 species:3702 "Arabi... 902 1.9e-90 1
TAIR|locus:2015651 - symbol:HCF173 "high chlorophyll fluo... 125 6.6e-05 1
TAIR|locus:2185228 - symbol:AT5G02240 species:3702 "Arabi... 104 9.4e-05 2
>TAIR|locus:2030270 [details] [associations]
symbol:AT1G72640 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] InterPro:IPR016040 EMBL:CP002684
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0009535 EMBL:BT011739
IPI:IPI00533777 RefSeq:NP_177408.3 UniGene:At.35075
ProteinModelPortal:Q6NMC1 SMR:Q6NMC1 PRIDE:Q6NMC1
EnsemblPlants:AT1G72640.1 GeneID:843596 KEGG:ath:AT1G72640
TAIR:At1g72640 HOGENOM:HOG000265886 InParanoid:Q6NMC1 OMA:AFGTYVE
PhylomeDB:Q6NMC1 ProtClustDB:CLSN2681414 Genevestigator:Q6NMC1
Uniprot:Q6NMC1
Length = 312
Score = 902 (322.6 bits), Expect = 1.9e-90, P = 1.9e-90
Identities = 182/308 (59%), Positives = 223/308 (72%)
Query: 1 MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
MAGT+ PS L+ Q + F+S + E AN + K+ L RC AKKKISFVDQILD
Sbjct: 1 MAGTSLPSCLLSQGPSLLFSSSNQDSE-ANKCRIGITSGKRCLVRCFAKKKISFVDQILD 59
Query: 61 YIEGGPKLRKWYGAPDLLPKDGS-----NXXXXXXXXXXXXXARDAVLVTDGDSDIGQMV 115
YIEGGPKLRKWYGAP+L PKDGS + +D V VTDGDSD+GQM+
Sbjct: 60 YIEGGPKLRKWYGAPELRPKDGSLSGDDDEFEAEEKEDDLDGEKDVVFVTDGDSDLGQMI 119
Query: 116 ILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFI 175
IL LIVK TR+KALVKDKR A+E+FG+YVE GDAS+++FLK A +GV ++I P+EGF+
Sbjct: 120 ILQLIVKGTRVKALVKDKRKALEAFGSYVELTTGDASDERFLKKAFKGVGAVISPTEGFL 179
Query: 176 SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGV 235
S S +GV+H +LLSQLSVY SGGIQA+M A+KLAEQDE+ ++S +PYTIIRTG
Sbjct: 180 SIVKSFRGVKHAVLLSQLSVYESSGGIQAMMNSKAKKLAEQDENAAISSNVPYTIIRTGK 239
Query: 236 LQNTPGGKQGFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVSDWKK 295
L+N+PGG QGF F G AA GS+SKEDAA ICVEAL IP TGLIFEV NGEE VSDW+
Sbjct: 240 LENSPGGSQGFNFSAGAAAKGSISKEDAARICVEALSVIPPTGLIFEVTNGEEVVSDWEG 299
Query: 296 CFSRLMEK 303
++M++
Sbjct: 300 QLMKVMQR 307
>TAIR|locus:2015651 [details] [associations]
symbol:HCF173 "high chlorophyll fluorescence phenotype
173" species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0006413
"translational initiation" evidence=IMP] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0010155 "regulation of proton transport"
evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006413 GO:GO:0009941 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR013857 Pfam:PF08547 eggNOG:COG0702
EMBL:AY062632 EMBL:AY128723 IPI:IPI00529705 RefSeq:NP_173116.1
UniGene:At.27283 UniGene:At.49888 ProteinModelPortal:Q8W4D6
SMR:Q8W4D6 STRING:Q8W4D6 PaxDb:Q8W4D6 PRIDE:Q8W4D6
EnsemblPlants:AT1G16720.1 GeneID:838243 KEGG:ath:AT1G16720
TAIR:At1g16720 HOGENOM:HOG000238768 InParanoid:Q8W4D6 OMA:KANNYLT
PhylomeDB:Q8W4D6 ProtClustDB:CLSN2679821 ArrayExpress:Q8W4D6
Genevestigator:Q8W4D6 Uniprot:Q8W4D6
Length = 598
Score = 125 (49.1 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 31/86 (36%), Positives = 44/86 (51%)
Query: 198 GSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEGCAANGS 257
GSG ++A + K E L SG+ YTIIR G L+ PGG++ F++G +
Sbjct: 476 GSG-VEANRREQVLKAKRAGEDSLRRSGLGYTIIRPGPLKEEPGGQRALIFDQGNRISQG 534
Query: 258 LSKEDAAFICVEALESIPQTGLIFEV 283
+S D A ICV+AL F+V
Sbjct: 535 ISCADVADICVKALHDSTARNKSFDV 560
>TAIR|locus:2185228 [details] [associations]
symbol:AT5G02240 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0048046 "apoplast" evidence=IDA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR016040 GO:GO:0005829 GO:GO:0005886
GO:GO:0009737 GO:GO:0005774 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0048046
EMBL:AL162508 eggNOG:COG0702 UniGene:At.21103 HOGENOM:HOG000262433
ProtClustDB:CLSN2688756 EMBL:AY142045 EMBL:BT000751 EMBL:AK221714
EMBL:AF410336 IPI:IPI00530877 PIR:T48245 RefSeq:NP_568098.1
PDB:1XQ6 PDB:1YBM PDB:2Q46 PDB:2Q4B PDBsum:1XQ6 PDBsum:1YBM
PDBsum:2Q46 PDBsum:2Q4B ProteinModelPortal:Q94EG6 SMR:Q94EG6
PaxDb:Q94EG6 PRIDE:Q94EG6 ProMEX:Q94EG6 DNASU:830851
EnsemblPlants:AT5G02240.1 GeneID:830851 KEGG:ath:AT5G02240
TAIR:At5g02240 InParanoid:Q94EG6 OMA:KTGFRIA PhylomeDB:Q94EG6
EvolutionaryTrace:Q94EG6 Genevestigator:Q94EG6 GermOnline:AT5G02240
Uniprot:Q94EG6
Length = 253
Score = 104 (41.7 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 35/135 (25%), Positives = 60/135 (44%)
Query: 177 NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVL 236
+A + GV+H++++ + + L GN + E L SG PYTIIR G L
Sbjct: 118 DAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGL 177
Query: 237 QNTPGGKQ----GFQFEEGCAANGSLSKEDAAFICVEALESIPQTGLIFEVVNGEEKVS- 291
+ GG + G E ++ + D A +C++AL F++ + E S
Sbjct: 178 LDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTST 237
Query: 292 ---DWKKCFSRLMEK 303
D+K FS++ +
Sbjct: 238 PTKDFKALFSQVTSR 252
Score = 51 (23.0 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 17/69 (24%), Positives = 30/69 (43%)
Query: 102 VLVTDGDSDIGQMVILSLIVKRTRI--KALVKDKRNAMESFGTYVESMAGDASNKKFLKT 159
VLVT GQ+V L + K LV+ + E G + GD ++ +
Sbjct: 7 VLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK-EKIGGEADVFIGDITDADSINP 65
Query: 160 ALRGVRSII 168
A +G+ +++
Sbjct: 66 AFQGIDALV 74
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 306 293 0.00091 115 3 11 22 0.40 34
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 599 (64 KB)
Total size of DFA: 184 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.08u 0.14s 21.22t Elapsed: 00:00:01
Total cpu time: 21.08u 0.14s 21.22t Elapsed: 00:00:01
Start: Fri May 10 15:36:49 2013 End: Fri May 10 15:36:50 2013