Query 021856
Match_columns 306
No_of_seqs 49 out of 51
Neff 3.1
Searched_HMMs 13730
Date Mon Mar 25 10:21:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021856.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021856hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1rzhh2 f.23.10.1 (H:11-35) Ph 46.9 5.6 0.00041 23.9 2.1 20 184-203 4-23 (26)
2 d1m56d_ f.23.8.1 (D:) Bacteria 25.3 27 0.002 22.9 3.0 19 184-202 21-39 (42)
3 d1qled_ f.23.8.1 (D:) Bacteria 23.1 31 0.0023 22.7 3.0 19 184-202 22-40 (43)
4 d1pq1a_ f.1.4.1 (A:) Apoptosis 12.0 1E+02 0.0074 24.9 4.2 43 178-220 130-177 (196)
5 d2jm6b1 f.1.4.1 (B:147-308) EA 10.1 1.5E+02 0.011 22.5 4.5 39 182-220 93-136 (162)
6 d1rhsa2 c.46.1.2 (A:150-293) R 8.7 69 0.005 23.8 1.8 40 149-189 90-130 (144)
7 d1g5ma_ f.1.4.1 (A:) Bcl-2 {Hu 8.5 1.8E+02 0.013 22.5 4.3 41 178-218 94-139 (164)
8 d1xmeb2 f.17.2.1 (B:3-36) Bact 8.4 1.6E+02 0.011 18.0 3.1 9 166-174 15-23 (34)
9 d1zy3a1 f.1.4.1 (A:1-170) Apop 8.2 1.8E+02 0.013 22.5 4.3 40 179-218 86-130 (170)
10 d1ohua_ f.1.4.1 (A:) Apoptosis 7.6 1.9E+02 0.014 22.5 4.1 44 177-220 90-139 (172)
No 1
>d1rzhh2 f.23.10.1 (H:11-35) Photosystem II reaction centre subunit H, transmembrane region {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=46.89 E-value=5.6 Score=23.88 Aligned_cols=20 Identities=45% Similarity=0.476 Sum_probs=15.9
Q ss_pred chhHHHHHHHHHHHHHHHHh
Q 021856 184 SRLRLSALVLLASLIYLYQT 203 (306)
Q Consensus 184 Sw~R~llLi~lAvlVYL~QT 203 (306)
|..-|+..+++|.++|-.||
T Consensus 4 slaiw~fw~ffalli~ylqt 23 (26)
T d1rzhh2 4 SLAIYSFWIFLAGLIYYLQT 23 (26)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 44567778899999998887
No 2
>d1m56d_ f.23.8.1 (D:) Bacterial aa3 type cytochrome c oxidase subunit IV {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=25.33 E-value=27 Score=22.91 Aligned_cols=19 Identities=32% Similarity=0.511 Sum_probs=15.4
Q ss_pred chhHHHHHHHHHHHHHHHH
Q 021856 184 SRLRLSALVLLASLIYLYQ 202 (306)
Q Consensus 184 Sw~R~llLi~lAvlVYL~Q 202 (306)
.|..|..++++++++||+.
T Consensus 21 k~~t~~~i~~i~~liflAi 39 (42)
T d1m56d_ 21 RMVTWAAVVIVAALIFLAL 39 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3677888889999999874
No 3
>d1qled_ f.23.8.1 (D:) Bacterial aa3 type cytochrome c oxidase subunit IV {Paracoccus denitrificans [TaxId: 266]}
Probab=23.07 E-value=31 Score=22.67 Aligned_cols=19 Identities=16% Similarity=0.286 Sum_probs=15.4
Q ss_pred chhHHHHHHHHHHHHHHHH
Q 021856 184 SRLRLSALVLLASLIYLYQ 202 (306)
Q Consensus 184 Sw~R~llLi~lAvlVYL~Q 202 (306)
.|..|..++++++++||+.
T Consensus 22 ~~~t~~~i~~i~~liflAi 40 (43)
T d1qled_ 22 KGATWVSILSIAVLVFLAL 40 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3677888889999999874
No 4
>d1pq1a_ f.1.4.1 (A:) Apoptosis regulator Bcl-xL {Mouse (Mus musculus) [TaxId: 10090]}
Probab=11.97 E-value=1e+02 Score=24.86 Aligned_cols=43 Identities=12% Similarity=0.234 Sum_probs=30.8
Q ss_pred eeeCCCchhHHHHHHHH--HHHHHHHHhc---ccHHHHHHHHHhhhhc
Q 021856 178 VFNQDGSRLRLSALVLL--ASLIYLYQTG---ALTPLLRWLSQSMQRA 220 (306)
Q Consensus 178 ~Fsq~gSw~R~llLi~l--AvlVYL~QTG---~Lapl~R~l~r~~qRa 220 (306)
+|.-+-.|.|+..|..+ .+.+++...| .+.-|++|+.+-+.++
T Consensus 130 lF~dginWGRIVal~~F~~~la~~~~~~~~~~~v~~I~~~~~~fl~~~ 177 (196)
T d1pq1a_ 130 LFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIASWMATYLNDH 177 (196)
T ss_dssp HTTTCCCHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHh
Confidence 45656899999988855 5677888777 5666777766665444
No 5
>d2jm6b1 f.1.4.1 (B:147-308) EAT/MCL-1 (Myeloid cell leukemia sequence 1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=10.12 E-value=1.5e+02 Score=22.50 Aligned_cols=39 Identities=15% Similarity=0.167 Sum_probs=26.2
Q ss_pred CCchhHHHHHHHH--HHHHHHHHhcc---cHHHHHHHHHhhhhc
Q 021856 182 DGSRLRLSALVLL--ASLIYLYQTGA---LTPLLRWLSQSMQRA 220 (306)
Q Consensus 182 ~gSw~R~llLi~l--AvlVYL~QTG~---Lapl~R~l~r~~qRa 220 (306)
...|.|.+.|..+ .+++++...|. +.-|+.|+.+-+..+
T Consensus 93 ~~NWGRIval~~F~~~la~~~~~~~~~~~v~~i~~~~~~fl~~~ 136 (162)
T d2jm6b1 93 VTNWGRIVTLISFGAFVAKHLKSVNQESFIEPLAETITDVLVRT 136 (162)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHh
Confidence 4579999999866 45777777774 455666666555433
No 6
>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}
Probab=8.70 E-value=69 Score=23.84 Aligned_cols=40 Identities=15% Similarity=0.076 Sum_probs=26.5
Q ss_pred hccceeeeeehHHHHH-HHHHHHHHHhhheeeeCCCchhHHH
Q 021856 149 RQRQVVVRRFQIAFHL-DLMLILKLAAVIFVFNQDGSRLRLS 189 (306)
Q Consensus 149 ~qrqvvvrrfqvai~~-dLWLiLKLa~fVf~Fsq~gSw~R~l 189 (306)
.-+.||+= -.-|++- .+|++|+++-+==+...||||..|.
T Consensus 90 ~~~~iI~y-C~sG~~A~~~~~~l~~lG~~~v~~YdGsw~eW~ 130 (144)
T d1rhsa2 90 LTKPLIAT-CRKGVTACHIALAAYLCGKPDVAIYDGSWFEWF 130 (144)
T ss_dssp TTSCEEEE-CSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHH
T ss_pred CCCCEEEE-ecccchHHHHHHHHHHcCCCCCEEeCCCHHHHh
Confidence 34566654 2345443 4888888888754555689999995
No 7
>d1g5ma_ f.1.4.1 (A:) Bcl-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.46 E-value=1.8e+02 Score=22.47 Aligned_cols=41 Identities=10% Similarity=0.225 Sum_probs=27.1
Q ss_pred eeeCCCchhHHHHHHHH--HHHHHHHHhcc---cHHHHHHHHHhhh
Q 021856 178 VFNQDGSRLRLSALVLL--ASLIYLYQTGA---LTPLLRWLSQSMQ 218 (306)
Q Consensus 178 ~Fsq~gSw~R~llLi~l--AvlVYL~QTG~---Lapl~R~l~r~~q 218 (306)
+|.-+-+|.|...|.++ .+++++...|. +.-|++|+.+-+.
T Consensus 94 lF~dginWGRIVal~~F~~~la~~~~~~~~~~~v~~i~~~~~~~l~ 139 (164)
T d1g5ma_ 94 LFRDGVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIALWMTEYLN 139 (164)
T ss_dssp HTTSCCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHH
Confidence 45667899999988855 56677777773 3445555555443
No 8
>d1xmeb2 f.17.2.1 (B:3-36) Bacterial ba3 type cytochrome c oxidase subunit II {Thermus thermophilus [TaxId: 274]}
Probab=8.35 E-value=1.6e+02 Score=17.96 Aligned_cols=9 Identities=33% Similarity=0.209 Sum_probs=5.1
Q ss_pred HHHHHHHHh
Q 021856 166 LMLILKLAA 174 (306)
Q Consensus 166 LWLiLKLa~ 174 (306)
=||.+.|++
T Consensus 15 gwlafslam 23 (34)
T d1xmeb2 15 GWLAFSLAM 23 (34)
T ss_dssp HHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 366666653
No 9
>d1zy3a1 f.1.4.1 (A:1-170) Apoptosis regulator Bcl-w {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.23 E-value=1.8e+02 Score=22.48 Aligned_cols=40 Identities=15% Similarity=0.227 Sum_probs=26.8
Q ss_pred eeCCCchhHHHHHHHH--HHHHHHHHhcc---cHHHHHHHHHhhh
Q 021856 179 FNQDGSRLRLSALVLL--ASLIYLYQTGA---LTPLLRWLSQSMQ 218 (306)
Q Consensus 179 Fsq~gSw~R~llLi~l--AvlVYL~QTG~---Lapl~R~l~r~~q 218 (306)
|..+-+|.|+..|.++ .+.+++...|. +.-|++|+.+-+.
T Consensus 86 F~dginWGRIVal~~F~g~la~~~~~~~~~~~v~~i~~~~~~fl~ 130 (170)
T d1zy3a1 86 FQGGPNWGRLVAFFVFGAALCAESVNKEMEVLVGQVQEWMVAYLE 130 (170)
T ss_dssp HTTCCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred hcCCCcHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHH
Confidence 4667899999988865 56677777774 3445555555543
No 10
>d1ohua_ f.1.4.1 (A:) Apoptosis regulator ced-9 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=7.57 E-value=1.9e+02 Score=22.52 Aligned_cols=44 Identities=14% Similarity=0.060 Sum_probs=26.1
Q ss_pred eeeeCCCchhHHHHHHHHHH--HHHHHHhc----ccHHHHHHHHHhhhhc
Q 021856 177 FVFNQDGSRLRLSALVLLAS--LIYLYQTG----ALTPLLRWLSQSMQRA 220 (306)
Q Consensus 177 f~Fsq~gSw~R~llLi~lAv--lVYL~QTG----~Lapl~R~l~r~~qRa 220 (306)
=+|..+-+|.|+..|.++|. ++++...| ...-+++|+.+-+...
T Consensus 90 elf~~ginWGRIVal~aF~g~la~~~~~~~~~~~~v~~i~~~~~~fl~~~ 139 (172)
T d1ohua_ 90 QTDQSPMSYGRLIGLISFGGFVAAKMMESVELQGQVRNLFVYTSLFIKTR 139 (172)
T ss_dssp -----CCCHHHHHHHHHHHHHHHHHHTTCTTTGGGHHHHHHHHHHHHHHH
T ss_pred hhccCCCCHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHh
Confidence 46667789999999997644 35655444 4566777766655443
Done!