BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021857
(306 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224100531|ref|XP_002311913.1| predicted protein [Populus trichocarpa]
gi|222851733|gb|EEE89280.1| predicted protein [Populus trichocarpa]
Length = 302
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/304 (79%), Positives = 267/304 (87%), Gaps = 7/304 (2%)
Query: 1 MAGAGIHTYHQQWPPAPAPPPPPAAAAAAPP---PPPPVPYDNTNRI--AHDEVRTIFIT 55
MAG GIH YHQQWPPA APPPP A A P PP V +DN+NR H+EVRTIFIT
Sbjct: 1 MAGTGIHPYHQQWPPAQAPPPPTAPGAPPPSIHHAPPHVLFDNSNRGPPTHEEVRTIFIT 60
Query: 56 GLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAE 115
G PDDVKERELQNLLRWLPGYEASQVNYKG+K MGFALFS++Q A+AAKD+LQ+M+FD E
Sbjct: 61 GFPDDVKERELQNLLRWLPGYEASQVNYKGDKAMGFALFSSSQHAIAAKDSLQDMVFDVE 120
Query: 116 TKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGP 175
TKSVLHTEMAKKNLFVKRGIVAD+NAYDQSKRLRTGGDY+H Y+ PSPF PP PVWGP
Sbjct: 121 TKSVLHTEMAKKNLFVKRGIVADSNAYDQSKRLRTGGDYSHAAYTTPSPF-HPPPPVWGP 179
Query: 176 HGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESI 235
HGYMAP PPPYDPYGGY P V M PAP+PAPSSYVP+QNTKDNPPCNTLFIGNLG++I
Sbjct: 180 HGYMAPVPPPYDPYGGYPAPQVPM-PPAPIPAPSSYVPIQNTKDNPPCNTLFIGNLGQNI 238
Query: 236 NEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMR 295
NE+ELRGLFS QPGFKQMK+LRQERHTVCFIEFED+NSA++VHH+LQGAVIPSSGS+GMR
Sbjct: 239 NEDELRGLFSVQPGFKQMKILRQERHTVCFIEFEDLNSATNVHHSLQGAVIPSSGSIGMR 298
Query: 296 IQYP 299
IQYP
Sbjct: 299 IQYP 302
>gi|298204782|emb|CBI25280.3| unnamed protein product [Vitis vinifera]
Length = 299
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 258/299 (86%), Positives = 275/299 (91%)
Query: 1 MAGAGIHTYHQQWPPAPAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDD 60
MAGAGIH YHQQWPPAPAP P A AP PPP+ +N NR DEVRTIFI+GLP+D
Sbjct: 1 MAGAGIHPYHQQWPPAPAPQPSAPGAPPAPAHPPPILVENPNRPNSDEVRTIFISGLPED 60
Query: 61 VKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVL 120
VKERELQNLLRWLPGYEASQVN+KGE PMGFALFST QLAVAAKDALQEM+FDAE+KSVL
Sbjct: 61 VKERELQNLLRWLPGYEASQVNFKGEHPMGFALFSTPQLAVAAKDALQEMVFDAESKSVL 120
Query: 121 HTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMA 180
HTEMAKKNLFVKRGIVAD++AYDQSKRLRTGGDYTHTGYS+PSPFH PPAPVWGPHGYMA
Sbjct: 121 HTEMAKKNLFVKRGIVADSSAYDQSKRLRTGGDYTHTGYSSPSPFHPPPAPVWGPHGYMA 180
Query: 181 PPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEEL 240
P PPPYDPYG Y VPPV MPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGE+INEEEL
Sbjct: 181 PAPPPYDPYGAYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENINEEEL 240
Query: 241 RGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYP 299
RGLFS QPGFKQMK+LRQERHTVCFIEFED+N+A++VHH+LQGAVIPSSGSVGMRIQYP
Sbjct: 241 RGLFSVQPGFKQMKILRQERHTVCFIEFEDMNTATNVHHSLQGAVIPSSGSVGMRIQYP 299
>gi|255568059|ref|XP_002525006.1| RNA-binding protein with multiple splicing, putative [Ricinus
communis]
gi|223535714|gb|EEF37378.1| RNA-binding protein with multiple splicing, putative [Ricinus
communis]
Length = 337
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 257/307 (83%), Positives = 276/307 (89%), Gaps = 9/307 (2%)
Query: 1 MAGAGIHTYH-QQWPPAPAPPPPPAAAA-------AAPPPPPPVPYDNTNRI-AHDEVRT 51
MAGAGIH YH QQWPPA APPPPPAAA +A PP V DN+NR HDEVRT
Sbjct: 1 MAGAGIHPYHHQQWPPAAAPPPPPAAAGGAAPPPPSAVHHPPTVLVDNSNRGPTHDEVRT 60
Query: 52 IFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMI 111
IFITGLP+DVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFST+Q A+AAK+ALQ+M+
Sbjct: 61 IFITGLPEDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTSQFAIAAKEALQDML 120
Query: 112 FDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAP 171
FDAE+KS+LHTEMAKKNLFVKRGIVAD+NAYDQSKRLRTGGDY+HT Y+ PSPFH PPAP
Sbjct: 121 FDAESKSILHTEMAKKNLFVKRGIVADSNAYDQSKRLRTGGDYSHTAYTTPSPFHPPPAP 180
Query: 172 VWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNL 231
VWGPHGYMAP PPPYDPY GY VP V MPAPAP+PAPSSY+PVQNTKDNPPCNTLFIGNL
Sbjct: 181 VWGPHGYMAPAPPPYDPYAGYPVPQVPMPAPAPMPAPSSYLPVQNTKDNPPCNTLFIGNL 240
Query: 232 GESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGS 291
GE+INE+ELRGLFS QPGFKQMKVLRQERHTVCFIEFEDVNSAS+VH +LQGAVIPSSGS
Sbjct: 241 GENINEDELRGLFSVQPGFKQMKVLRQERHTVCFIEFEDVNSASNVHRSLQGAVIPSSGS 300
Query: 292 VGMRIQY 298
VGMRIQY
Sbjct: 301 VGMRIQY 307
>gi|225443274|ref|XP_002273578.1| PREDICTED: cell wall integrity protein scw1-like [Vitis vinifera]
Length = 328
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 257/298 (86%), Positives = 274/298 (91%)
Query: 1 MAGAGIHTYHQQWPPAPAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDD 60
MAGAGIH YHQQWPPAPAP P A AP PPP+ +N NR DEVRTIFI+GLP+D
Sbjct: 1 MAGAGIHPYHQQWPPAPAPQPSAPGAPPAPAHPPPILVENPNRPNSDEVRTIFISGLPED 60
Query: 61 VKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVL 120
VKERELQNLLRWLPGYEASQVN+KGE PMGFALFST QLAVAAKDALQEM+FDAE+KSVL
Sbjct: 61 VKERELQNLLRWLPGYEASQVNFKGEHPMGFALFSTPQLAVAAKDALQEMVFDAESKSVL 120
Query: 121 HTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMA 180
HTEMAKKNLFVKRGIVAD++AYDQSKRLRTGGDYTHTGYS+PSPFH PPAPVWGPHGYMA
Sbjct: 121 HTEMAKKNLFVKRGIVADSSAYDQSKRLRTGGDYTHTGYSSPSPFHPPPAPVWGPHGYMA 180
Query: 181 PPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEEL 240
P PPPYDPYG Y VPPV MPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGE+INEEEL
Sbjct: 181 PAPPPYDPYGAYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGENINEEEL 240
Query: 241 RGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
RGLFS QPGFKQMK+LRQERHTVCFIEFED+N+A++VHH+LQGAVIPSSGSVGMRIQY
Sbjct: 241 RGLFSVQPGFKQMKILRQERHTVCFIEFEDMNTATNVHHSLQGAVIPSSGSVGMRIQY 298
>gi|224113311|ref|XP_002316452.1| predicted protein [Populus trichocarpa]
gi|222865492|gb|EEF02623.1| predicted protein [Populus trichocarpa]
Length = 281
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 221/252 (87%), Positives = 235/252 (93%), Gaps = 1/252 (0%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQ 108
VRTIFITG PDDVKERELQNLLRWLPGYEASQVNYKGEK MGFALFS AQ A+AAKDALQ
Sbjct: 1 VRTIFITGFPDDVKERELQNLLRWLPGYEASQVNYKGEKAMGFALFSCAQHAIAAKDALQ 60
Query: 109 EMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAP 168
+M+FDA+TKSVLHTEMAKKNLFVKRGIVAD+NAYDQSKRLRTGGDY+HT Y++PSP P
Sbjct: 61 DMVFDADTKSVLHTEMAKKNLFVKRGIVADSNAYDQSKRLRTGGDYSHTTYTSPSP-FHP 119
Query: 169 PAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFI 228
P PVWGPHGYM P PPPYDPYGGY VP V MP PAP+PAPSSYVPVQNTKDNPPCNTLFI
Sbjct: 120 PPPVWGPHGYMTPAPPPYDPYGGYPVPQVPMPPPAPIPAPSSYVPVQNTKDNPPCNTLFI 179
Query: 229 GNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPS 288
GNLGE+INE+ELRGLFS QPGFKQMKVLRQERHTVCFIEFED+NSA++VHH LQGAVIPS
Sbjct: 180 GNLGENINEDELRGLFSVQPGFKQMKVLRQERHTVCFIEFEDLNSATNVHHTLQGAVIPS 239
Query: 289 SGSVGMRIQYPF 300
SGSVGMRIQYPF
Sbjct: 240 SGSVGMRIQYPF 251
>gi|449447968|ref|XP_004141738.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
sativus]
gi|449515829|ref|XP_004164950.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
sativus]
Length = 335
Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust.
Identities = 254/305 (83%), Positives = 271/305 (88%), Gaps = 7/305 (2%)
Query: 1 MAGAGIHTYHQQWPPAPAPPPPPAAAAAAPPPPPPVP-------YDNTNRIAHDEVRTIF 53
MAG GIH YHQQWP A A PPPP AAA PPP DN R A DEVRTIF
Sbjct: 1 MAGTGIHPYHQQWPAAAAAPPPPPPQAAAAAPPPIPHPHPPQILVDNPGRHASDEVRTIF 60
Query: 54 ITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFD 113
ITGLP+DVKERELQNLLRWLPGYEASQVN+KGEKPMGFALFS AQ A+AAKDALQ+M+FD
Sbjct: 61 ITGLPEDVKERELQNLLRWLPGYEASQVNFKGEKPMGFALFSNAQFAIAAKDALQDMVFD 120
Query: 114 AETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVW 173
AE+KSVLHTEMAKKNLFVKRGIVAD + YDQSKRLRTGGDY HTGYS+PSPFHAPP P+W
Sbjct: 121 AESKSVLHTEMAKKNLFVKRGIVADASVYDQSKRLRTGGDYAHTGYSSPSPFHAPPPPIW 180
Query: 174 GPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGE 233
GPHGYMAPPPPPYDPYGGY VPPV MPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGE
Sbjct: 181 GPHGYMAPPPPPYDPYGGYPVPPVPMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGE 240
Query: 234 SINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVG 293
++NEEELRGLFS QPGFKQMK+LRQERHTVCFIEFEDVN+A++VHH+LQGAVIPSSGSVG
Sbjct: 241 NVNEEELRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNNATNVHHSLQGAVIPSSGSVG 300
Query: 294 MRIQY 298
MRIQ+
Sbjct: 301 MRIQF 305
>gi|9280223|dbj|BAB01713.1| unnamed protein product [Arabidopsis thaliana]
Length = 317
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 241/313 (76%), Positives = 259/313 (82%), Gaps = 9/313 (2%)
Query: 1 MAGAGIHTYHQQWPPAPAPPPPPAAAAAAPPPPPP---------VPYDNTNRIAHDEVRT 51
MAGAGIH YHQQWPPA APPPP A ++AAPP PPP V DN NR +DE+RT
Sbjct: 1 MAGAGIHPYHQQWPPAGAPPPPAAVSSAAPPHPPPIHHHPPPPPVLVDNHNRPPYDELRT 60
Query: 52 IFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMI 111
IFI GLPDDVKEREL NLLRWLPGYEASQVN+KGEKPMGFALFSTAQ A+AAKD LQ M+
Sbjct: 61 IFIAGLPDDVKERELLNLLRWLPGYEASQVNFKGEKPMGFALFSTAQFAMAAKDTLQHMV 120
Query: 112 FDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAP 171
FDAE+KSV+HTEMAKKNLFVKRGIV D+NAYDQSKRLRTGGD TH+ YS PP
Sbjct: 121 FDAESKSVIHTEMAKKNLFVKRGIVGDSNAYDQSKRLRTGGDCTHSVYSPSPFHPPPPPV 180
Query: 172 VWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNL 231
PHGYMAP PPPYDPY GY PPV MP P P+ APSSYVPVQN KDNPPCNTLFIGNL
Sbjct: 181 WGPPHGYMAPAPPPYDPYAGYHAPPVPMPTPPPIAAPSSYVPVQNIKDNPPCNTLFIGNL 240
Query: 232 GESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGS 291
GE+INEEELR L SAQPGFKQMK+LRQERHTVCFIEFEDVNSA++VHHNLQGAVIPSSGS
Sbjct: 241 GENINEEELRSLLSAQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNLQGAVIPSSGS 300
Query: 292 VGMRIQYPFCCFC 304
+GMRIQYP+
Sbjct: 301 IGMRIQYPYILLL 313
>gi|30686138|ref|NP_683582.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|13605613|gb|AAK32800.1|AF361632_1 At3g21211 [Arabidopsis thaliana]
gi|23505943|gb|AAN28831.1| At3g21211/At3g21211 [Arabidopsis thaliana]
gi|26451397|dbj|BAC42798.1| unknown protein [Arabidopsis thaliana]
gi|110740646|dbj|BAE98426.1| hypothetical protein [Arabidopsis thaliana]
gi|222423570|dbj|BAH19754.1| AT3G21215 [Arabidopsis thaliana]
gi|332642956|gb|AEE76477.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 339
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 240/307 (78%), Positives = 257/307 (83%), Gaps = 9/307 (2%)
Query: 1 MAGAGIHTYHQQWPPAPAPPPPPAAAAAAPPPPPP---------VPYDNTNRIAHDEVRT 51
MAGAGIH YHQQWPPA APPPP A ++AAPP PPP V DN NR +DE+RT
Sbjct: 1 MAGAGIHPYHQQWPPAGAPPPPAAVSSAAPPHPPPIHHHPPPPPVLVDNHNRPPYDELRT 60
Query: 52 IFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMI 111
IFI GLPDDVKEREL NLLRWLPGYEASQVN+KGEKPMGFALFSTAQ A+AAKD LQ M+
Sbjct: 61 IFIAGLPDDVKERELLNLLRWLPGYEASQVNFKGEKPMGFALFSTAQFAMAAKDTLQHMV 120
Query: 112 FDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAP 171
FDAE+KSV+HTEMAKKNLFVKRGIV D+NAYDQSKRLRTGGD TH+ YS PP
Sbjct: 121 FDAESKSVIHTEMAKKNLFVKRGIVGDSNAYDQSKRLRTGGDCTHSVYSPSPFHPPPPPV 180
Query: 172 VWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNL 231
PHGYMAP PPPYDPY GY PPV MP P P+ APSSYVPVQN KDNPPCNTLFIGNL
Sbjct: 181 WGPPHGYMAPAPPPYDPYAGYHAPPVPMPTPPPIAAPSSYVPVQNIKDNPPCNTLFIGNL 240
Query: 232 GESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGS 291
GE+INEEELR L SAQPGFKQMK+LRQERHTVCFIEFEDVNSA++VHHNLQGAVIPSSGS
Sbjct: 241 GENINEEELRSLLSAQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNLQGAVIPSSGS 300
Query: 292 VGMRIQY 298
+GMRIQY
Sbjct: 301 IGMRIQY 307
>gi|297835092|ref|XP_002885428.1| hypothetical protein ARALYDRAFT_479641 [Arabidopsis lyrata subsp.
lyrata]
gi|297331268|gb|EFH61687.1| hypothetical protein ARALYDRAFT_479641 [Arabidopsis lyrata subsp.
lyrata]
Length = 339
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 241/307 (78%), Positives = 258/307 (84%), Gaps = 9/307 (2%)
Query: 1 MAGAGIHTYHQQWPPAPAPPPPPAAAAAAPPPPPP---------VPYDNTNRIAHDEVRT 51
MAGAGIH YHQQWPPA APPPP A ++AAPP PPP V DN NR +DE+RT
Sbjct: 1 MAGAGIHPYHQQWPPAGAPPPPAAVSSAAPPHPPPIHHHHPPPPVLVDNHNRPPYDELRT 60
Query: 52 IFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMI 111
IFI GLPDDVKEREL NLLRWLPGYEASQVN+KGEKPMGFALFSTAQ A+AAKD LQ M+
Sbjct: 61 IFIAGLPDDVKERELLNLLRWLPGYEASQVNFKGEKPMGFALFSTAQYAMAAKDNLQHMV 120
Query: 112 FDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAP 171
FDAE+KSV+HTEMAKKNLFVKRGIV D+NAYDQSKRLRTGGD TH+ YS PP
Sbjct: 121 FDAESKSVIHTEMAKKNLFVKRGIVGDSNAYDQSKRLRTGGDCTHSVYSPSPFHPPPPPV 180
Query: 172 VWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNL 231
PHGYMAP PPPYDPY GY PPV MPAP P+ APSSYVPVQN KDNPPCNTLFIGNL
Sbjct: 181 WGPPHGYMAPAPPPYDPYAGYHAPPVPMPAPPPIAAPSSYVPVQNIKDNPPCNTLFIGNL 240
Query: 232 GESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGS 291
GE+INEEELR L SAQPGFKQMK+LRQERHTVCFIEFEDVNSA++VHHNLQGAVIPSSGS
Sbjct: 241 GENINEEELRSLLSAQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNLQGAVIPSSGS 300
Query: 292 VGMRIQY 298
+GMRIQY
Sbjct: 301 IGMRIQY 307
>gi|356526326|ref|XP_003531769.1| PREDICTED: uncharacterized protein LOC100817421 [Glycine max]
Length = 318
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 230/299 (76%), Positives = 250/299 (83%), Gaps = 11/299 (3%)
Query: 1 MAGAGIHTYHQQWPPAPAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDD 60
MAG GIH YHQQW PA A PPPP AAA +EVRTIFITGLP+D
Sbjct: 1 MAGTGIHPYHQQWAPAAAAPPPPPPAAAG----------GPPPHPGEEVRTIFITGLPED 50
Query: 61 VKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVL 120
VKERELQNLLRWLPG+EASQ+N+K EKPMGFALFS A+ AKD LQ+M+FD +TKSVL
Sbjct: 51 VKERELQNLLRWLPGFEASQLNFKAEKPMGFALFSAPHQALTAKDILQDMLFDPDTKSVL 110
Query: 121 HTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGY-M 179
HTEMAKKNLFVKRGI AD A+DQSKRLRT GDYTHTGY++PSPFH PP PVWGPHGY
Sbjct: 111 HTEMAKKNLFVKRGIGADAGAFDQSKRLRTAGDYTHTGYTSPSPFHPPPPPVWGPHGYMA 170
Query: 180 APPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEE 239
PPPPPYDPY GY V PV MP PAP+ APS+YVPVQNTKDNPPCNTLFIGNLGE+INEEE
Sbjct: 171 PPPPPPYDPYAGYPVAPVPMPTPAPIAAPSTYVPVQNTKDNPPCNTLFIGNLGENINEEE 230
Query: 240 LRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+RGLFS QPGFKQMK+LRQERHTVCFIEFEDVNSA++VHHNLQGAVIPSSGS+GMRIQY
Sbjct: 231 VRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGMRIQY 289
>gi|195641146|gb|ACG40041.1| cell wall integrity protein scw1 [Zea mays]
gi|195642380|gb|ACG40658.1| cell wall integrity protein scw1 [Zea mays]
Length = 321
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/298 (70%), Positives = 238/298 (79%), Gaps = 2/298 (0%)
Query: 1 MAGAGIHTYHQQWPPAPAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDD 60
MAGAGIH + QQWPPA A PPPP AAA+ PPPP + DEVRTIFITGLP D
Sbjct: 1 MAGAGIHPF-QQWPPAAAAPPPPGAAASVAVPPPPPVPGAPGTVGPDEVRTIFITGLPAD 59
Query: 61 VKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVL 120
VKEREL NLLRWLPG+EASQ+N+KG++PMGFALFSTA A+AAK ALQ+M+FDAETK L
Sbjct: 60 VKERELHNLLRWLPGFEASQINFKGDQPMGFALFSTAHQAIAAKTALQDMVFDAETKVAL 119
Query: 121 HTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMA 180
HTEMAKKNLFVKR + D NA DQSKRLRTGGDYTH+ Y+ P P +WG GY+
Sbjct: 120 HTEMAKKNLFVKRCVGIDANAVDQSKRLRTGGDYTHSPYAPPFHPPPPAVSMWGTPGYIT 179
Query: 181 PPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEEL 240
PPPY+PY Y VPPV M +PAPV P++Y PVQNTKDNPPCNTLFIGNLG+++ EEEL
Sbjct: 180 -APPPYNPYAAYPVPPVAMTSPAPVTGPTAYAPVQNTKDNPPCNTLFIGNLGDTVVEEEL 238
Query: 241 RGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
R LFS QPGFKQMKVLRQ+R+TVCFIEFEDVN+A+SVH LQGAVIPSSG GMRIQ+
Sbjct: 239 RSLFSVQPGFKQMKVLRQDRNTVCFIEFEDVNAATSVHQTLQGAVIPSSGRGGMRIQF 296
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 2/122 (1%)
Query: 13 WPPAPAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDE-VRTIFITGLPDDVKERELQNLLR 71
+ P A P PP A + P P Y + T+FI L D V E EL++L
Sbjct: 184 YNPYAAYPVPPVAMTSPAPVTGPTAYAPVQNTKDNPPCNTLFIGNLGDTVVEEELRSLFS 243
Query: 72 WLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFV 131
PG++ +V + + F F A + LQ + + + + + + KN F
Sbjct: 244 VQPGFKQMKVLRQDRNTVCFIEFEDVNAATSVHQTLQGAVIPSSGRGGMRIQFS-KNPFG 302
Query: 132 KR 133
+R
Sbjct: 303 RR 304
>gi|226531816|ref|NP_001149394.1| LOC100283020 [Zea mays]
gi|195626938|gb|ACG35299.1| cell wall integrity protein scw1 [Zea mays]
gi|413921012|gb|AFW60944.1| cell wall integrity protein scw1 [Zea mays]
Length = 321
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/298 (70%), Positives = 237/298 (79%), Gaps = 2/298 (0%)
Query: 1 MAGAGIHTYHQQWPPAPAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDD 60
MAGAGIH + QQWPP A PPPP AAA+ PPPP + DEVRTIFITGLP D
Sbjct: 1 MAGAGIHPF-QQWPPTAAAPPPPGAAASVAVPPPPPVPGAPGTVGPDEVRTIFITGLPAD 59
Query: 61 VKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVL 120
VKEREL NLLRWLPG+EASQ+N+KG++PMGFALFSTA A+AAK ALQ+M+FDAETK L
Sbjct: 60 VKERELHNLLRWLPGFEASQINFKGDQPMGFALFSTAHQAIAAKTALQDMVFDAETKVAL 119
Query: 121 HTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMA 180
HTEMAKKNLFVKR + D NA DQSKRLRTGGDYTH+ Y+ P P +WG GY+
Sbjct: 120 HTEMAKKNLFVKRCVGIDANAVDQSKRLRTGGDYTHSPYAPPFHPPPPAVSMWGTPGYIT 179
Query: 181 PPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEEL 240
PPPY+PY Y VPPV M +PAPV P++Y PVQNTKDNPPCNTLFIGNLG+++ EEEL
Sbjct: 180 -APPPYNPYAAYPVPPVAMTSPAPVTGPTAYAPVQNTKDNPPCNTLFIGNLGDTVVEEEL 238
Query: 241 RGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
R LFS QPGFKQMKVLRQ+R+TVCFIEFEDVN+A+SVH LQGAVIPSSG GMRIQ+
Sbjct: 239 RSLFSVQPGFKQMKVLRQDRNTVCFIEFEDVNAATSVHQTLQGAVIPSSGRGGMRIQF 296
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 2/122 (1%)
Query: 13 WPPAPAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDE-VRTIFITGLPDDVKERELQNLLR 71
+ P A P PP A + P P Y + T+FI L D V E EL++L
Sbjct: 184 YNPYAAYPVPPVAMTSPAPVTGPTAYAPVQNTKDNPPCNTLFIGNLGDTVVEEELRSLFS 243
Query: 72 WLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFV 131
PG++ +V + + F F A + LQ + + + + + + KN F
Sbjct: 244 VQPGFKQMKVLRQDRNTVCFIEFEDVNAATSVHQTLQGAVIPSSGRGGMRIQFS-KNPFG 302
Query: 132 KR 133
+R
Sbjct: 303 RR 304
>gi|413921013|gb|AFW60945.1| hypothetical protein ZEAMMB73_771004 [Zea mays]
Length = 314
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/298 (69%), Positives = 236/298 (79%), Gaps = 2/298 (0%)
Query: 1 MAGAGIHTYHQQWPPAPAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDD 60
MAGAGIH + QQWPP A PPPP AAA+ PPPP + DEVRTIFITGLP D
Sbjct: 1 MAGAGIHPF-QQWPPTAAAPPPPGAAASVAVPPPPPVPGAPGTVGPDEVRTIFITGLPAD 59
Query: 61 VKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVL 120
VKEREL NLLRWLPG+EASQ+N+KG++PMGFALFSTA A+AAK ALQ+M+FDAETK L
Sbjct: 60 VKERELHNLLRWLPGFEASQINFKGDQPMGFALFSTAHQAIAAKTALQDMVFDAETKVAL 119
Query: 121 HTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMA 180
HTEMAKKNLFVKR + D NA DQSKRLRTGGDYTH+ Y+ P P +WG GY+
Sbjct: 120 HTEMAKKNLFVKRCVGIDANAVDQSKRLRTGGDYTHSPYAPPFHPPPPAVSMWGTPGYIT 179
Query: 181 PPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEEL 240
PPPY+PY Y VPPV M +PAPV P++Y PVQNTKDNPPCNTLFIGNLG+++ EEEL
Sbjct: 180 -APPPYNPYAAYPVPPVAMTSPAPVTGPTAYAPVQNTKDNPPCNTLFIGNLGDTVVEEEL 238
Query: 241 RGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
R LFS QPGFKQMKVLRQ+R+TVCFIEFEDVN+A+SVH LQGAVIPSSG GMRI +
Sbjct: 239 RSLFSVQPGFKQMKVLRQDRNTVCFIEFEDVNAATSVHQTLQGAVIPSSGRGGMRIHF 296
>gi|388516627|gb|AFK46375.1| unknown [Medicago truncatula]
Length = 314
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 222/299 (74%), Positives = 244/299 (81%), Gaps = 16/299 (5%)
Query: 1 MAGAGIHTYHQQWPPAPAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDD 60
MA GIH YHQQWPPA APPPP A +P + +EVRTIFITGLP+D
Sbjct: 1 MAANGIHPYHQQWPPAAAPPPPQPTAIPSP--------------SSEEVRTIFITGLPED 46
Query: 61 VKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVL 120
VKERELQNL RWLPG+EASQ+N+K EKPMGFALF++ A+AAKD LQ+M+FD E KSVL
Sbjct: 47 VKERELQNLCRWLPGFEASQLNFKAEKPMGFALFNSPHQAIAAKDILQDMLFDPEAKSVL 106
Query: 121 HTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMA 180
HTEMAKKNLFVKRGI AD A+DQSKRLRT GDY HTGY PSPFH PP PVWGPHGYMA
Sbjct: 107 HTEMAKKNLFVKRGIGADAVAFDQSKRLRTAGDYNHTGYVTPSPFHPPPPPVWGPHGYMA 166
Query: 181 PPPPPYDPYGGYGVPPVQMPAPAPVP-APSSYVPVQNTKDNPPCNTLFIGNLGESINEEE 239
PPPPP G P Q+P PAPV APSSYVP+QNTKDNPPCNTLFIGNLGE+INEEE
Sbjct: 167 PPPPPPYDP-YAGYPVAQVPMPAPVSIAPSSYVPIQNTKDNPPCNTLFIGNLGENINEEE 225
Query: 240 LRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+RGLFS QPGFKQMK++RQERHTVCFIEFEDVNSA++VHHNLQGAVIPSSGS+GMRIQY
Sbjct: 226 VRGLFSVQPGFKQMKIIRQERHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGMRIQY 284
>gi|356521751|ref|XP_003529515.1| PREDICTED: uncharacterized protein LOC100797865 [Glycine max]
Length = 320
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 226/302 (74%), Positives = 247/302 (81%), Gaps = 15/302 (4%)
Query: 1 MAGAGIHTYHQQWPPAPAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDD 60
MAG GIH YHQQW PA A PPPP AAA +EVRTIFITGLP+D
Sbjct: 1 MAGTGIHPYHQQWAPAAAAPPPPPAAAGG-----------PPPHPGEEVRTIFITGLPED 49
Query: 61 VKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVL 120
VKERELQNLLRWLPG+EASQ+N+K EKPMGFALFS A+AAKD LQ+M+FD +TKSVL
Sbjct: 50 VKERELQNLLRWLPGFEASQLNFKAEKPMGFALFSAPHQALAAKDILQDMLFDPDTKSVL 109
Query: 121 HTEMAKKNLFVKR--GIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPH-- 176
HTEMAKKNLFVKR G A+DQSKRLRT GDYTH+GY++PSPFH PP PVWGPH
Sbjct: 110 HTEMAKKNLFVKRGIGAADAGGAFDQSKRLRTAGDYTHSGYTSPSPFHPPPPPVWGPHGY 169
Query: 177 GYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESIN 236
PPPPPYDPY GY V PV MP PAP+PAPS+YVPVQNTKDNPPCNTLFIGNLGE+IN
Sbjct: 170 MAPPPPPPPYDPYAGYPVAPVPMPTPAPIPAPSTYVPVQNTKDNPPCNTLFIGNLGENIN 229
Query: 237 EEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRI 296
EEE+RGLFS QPGFKQMK+LRQERHTVCFIEFEDVNSA++VHHNLQGAVIPSSGS+GMRI
Sbjct: 230 EEEVRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGMRI 289
Query: 297 QY 298
QY
Sbjct: 290 QY 291
>gi|357145342|ref|XP_003573610.1| PREDICTED: uncharacterized protein LOC100829014 [Brachypodium
distachyon]
Length = 317
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/298 (69%), Positives = 236/298 (79%), Gaps = 6/298 (2%)
Query: 1 MAGAGIHTYHQQWPPAPAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDD 60
MAGAGIH +HQQWPPA A PPA P P D R DEVRTIFITGLP D
Sbjct: 1 MAGAGIHPFHQQWPPAAAASVPPAVPPPPPVP---GVPDAAARPGSDEVRTIFITGLPVD 57
Query: 61 VKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVL 120
VKEREL NLLRWLPG+EASQ+N+KG++PMGFALFS A A AAK ALQ+++FDAETKS L
Sbjct: 58 VKERELHNLLRWLPGFEASQINFKGDQPMGFALFSYAHHANAAKAALQDLVFDAETKSAL 117
Query: 121 HTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMA 180
H EMAKKNLF+KRG AD NA DQSKRLRTGGDYTH+ Y+ P P VWG GY+A
Sbjct: 118 HIEMAKKNLFIKRG--ADANAMDQSKRLRTGGDYTHSPYAPPFHPPPPAVAVWGNAGYLA 175
Query: 181 PPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEEL 240
PPP Y+PY Y VPPV M +P+P+P P++Y PVQNTKDNPPCNTLFIGNLGE++ EEEL
Sbjct: 176 APPP-YNPYAAYPVPPVPMASPSPLPGPTAYAPVQNTKDNPPCNTLFIGNLGETVVEEEL 234
Query: 241 RGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
RGLFS QPGFKQMKVLRQ+R+TVCFIEF+DV++AS+VHH LQGAVIPSSG GMRIQ+
Sbjct: 235 RGLFSVQPGFKQMKVLRQDRNTVCFIEFDDVSAASAVHHTLQGAVIPSSGRGGMRIQF 292
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 2/121 (1%)
Query: 17 PAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGY 76
P PP P A+ + P P P NT + T+FI L + V E EL+ L PG+
Sbjct: 187 PVPPVPMASPSPLPGPTAYAPVQNTKD--NPPCNTLFIGNLGETVVEEELRGLFSVQPGF 244
Query: 77 EASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIV 136
+ +V + + F F A A LQ + + + + + +K ++ +V
Sbjct: 245 KQMKVLRQDRNTVCFIEFDDVSAASAVHHTLQGAVIPSSGRGGMRIQFSKNPFGRRKDLV 304
Query: 137 A 137
Sbjct: 305 G 305
>gi|357467715|ref|XP_003604142.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355505197|gb|AES86339.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 311
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/301 (72%), Positives = 243/301 (80%), Gaps = 16/301 (5%)
Query: 1 MAGAGIHTYHQQWPPAPAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDD 60
MA GIH YHQQWPPA APPPP A +P + +EVRTIFITGLP+D
Sbjct: 1 MAANGIHPYHQQWPPAAAPPPPQPTAIPSP--------------SSEEVRTIFITGLPED 46
Query: 61 VKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVL 120
VKERELQNL RWLPG+EASQ+N+K EKPMGFALF++ A+AAKD LQ+M+FD E KSVL
Sbjct: 47 VKERELQNLCRWLPGFEASQLNFKAEKPMGFALFNSPHQAIAAKDILQDMLFDPEAKSVL 106
Query: 121 HTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMA 180
HTEMAKKNLFVKRGI AD A+DQSKRLRT GDY HTGY PSPFH PP PVWGPHGYMA
Sbjct: 107 HTEMAKKNLFVKRGIGADAVAFDQSKRLRTAGDYNHTGYVTPSPFHPPPPPVWGPHGYMA 166
Query: 181 PPPPPYDPYGGYGVPPVQMPAPAPVP-APSSYVPVQNTKDNPPCNTLFIGNLGESINEEE 239
PPPPP G P Q+P PAPV APSSYVP+QNTKDNPPCNTLFIGNLGE+INEEE
Sbjct: 167 PPPPPPYDP-YAGYPVAQVPMPAPVSIAPSSYVPIQNTKDNPPCNTLFIGNLGENINEEE 225
Query: 240 LRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYP 299
+RGLFS QPGFKQMK++RQERHTVCFIEFEDVNSA++VHHNLQGAVIPSSGS+G+ + P
Sbjct: 226 VRGLFSVQPGFKQMKIIRQERHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGIYSKNP 285
Query: 300 F 300
F
Sbjct: 286 F 286
>gi|413921011|gb|AFW60943.1| hypothetical protein ZEAMMB73_771004 [Zea mays]
Length = 318
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/298 (69%), Positives = 234/298 (78%), Gaps = 5/298 (1%)
Query: 1 MAGAGIHTYHQQWPPAPAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDD 60
MAGAGIH + QQWPP A PPPP AAA+ PPPP + DEVRTIFITGLP D
Sbjct: 1 MAGAGIHPF-QQWPPTAAAPPPPGAAASVAVPPPPPVPGAPGTVGPDEVRTIFITGLPAD 59
Query: 61 VKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVL 120
VKEREL NLLRWLPG+EASQ+N+KG++PMGFALFSTA A+AAK ALQ+M+FDAETK L
Sbjct: 60 VKERELHNLLRWLPGFEASQINFKGDQPMGFALFSTAHQAIAAKTALQDMVFDAETKVAL 119
Query: 121 HTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMA 180
HTEMAKKNLFVKR + D NA DQSKRLRTGGDYTH+ Y+ P P +WG GY+
Sbjct: 120 HTEMAKKNLFVKRCVGIDANAVDQSKRLRTGGDYTHSPYAPPFHPPPPAVSMWGTPGYIT 179
Query: 181 PPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEEL 240
PPPY+PY Y VPPV M +PAPV P++Y PVQ DNPPCNTLFIGNLG+++ EEEL
Sbjct: 180 -APPPYNPYAAYPVPPVAMTSPAPVTGPTAYAPVQ---DNPPCNTLFIGNLGDTVVEEEL 235
Query: 241 RGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
R LFS QPGFKQMKVLRQ+R+TVCFIEFEDVN+A+SVH LQGAVIPSSG GMRIQ+
Sbjct: 236 RSLFSVQPGFKQMKVLRQDRNTVCFIEFEDVNAATSVHQTLQGAVIPSSGRGGMRIQF 293
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 11/125 (8%)
Query: 13 WPPAPAPPPPPAAAAAAPPPPPPVPY----DNTNRIAHDEVRTIFITGLPDDVKERELQN 68
+ P A P PP A + P P Y DN T+FI L D V E EL++
Sbjct: 184 YNPYAAYPVPPVAMTSPAPVTGPTAYAPVQDNP------PCNTLFIGNLGDTVVEEELRS 237
Query: 69 LLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKN 128
L PG++ +V + + F F A + LQ + + + + + + KN
Sbjct: 238 LFSVQPGFKQMKVLRQDRNTVCFIEFEDVNAATSVHQTLQGAVIPSSGRGGMRIQFS-KN 296
Query: 129 LFVKR 133
F +R
Sbjct: 297 PFGRR 301
>gi|40253748|dbj|BAD05688.1| putative mec-8 [Oryza sativa Japonica Group]
gi|40253912|dbj|BAD05845.1| putative mec-8 [Oryza sativa Japonica Group]
Length = 315
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/255 (74%), Positives = 218/255 (85%), Gaps = 2/255 (0%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDA 106
DEVRTIFITGLP DVKEREL NLLRWLPG+EASQ+N+KG++PMGFALFS+A A+AAK A
Sbjct: 59 DEVRTIFITGLPTDVKERELHNLLRWLPGFEASQINFKGDQPMGFALFSSAHHAIAAKAA 118
Query: 107 LQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFH 166
LQ++IFDAETK+ LHTEMAKKNLFVKRG+ D NA DQSKRLRTGGDYTH+ Y+AP
Sbjct: 119 LQDLIFDAETKTALHTEMAKKNLFVKRGVGNDANAMDQSKRLRTGGDYTHSPYAAPPYHP 178
Query: 167 APP-APVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNT 225
PP +WG GY+A PPP Y+ Y Y VPPV M +P+PVP P++Y PVQNTKDNPPCNT
Sbjct: 179 PPPAVSMWGTPGYIAAPPP-YNHYAAYSVPPVAMTSPSPVPGPTAYAPVQNTKDNPPCNT 237
Query: 226 LFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAV 285
LFIGNLGE++ EEELR LFS QPG+KQMKVLRQ+R+TVCFIEFEDVN+AS+VHHNLQGAV
Sbjct: 238 LFIGNLGETVIEEELRSLFSVQPGYKQMKVLRQDRNTVCFIEFEDVNAASAVHHNLQGAV 297
Query: 286 IPSSGSVGMRIQYPF 300
IPSSG GMRIQYP
Sbjct: 298 IPSSGRGGMRIQYPL 312
>gi|21615411|emb|CAD33925.1| proline rich protein 3 [Cicer arietinum]
Length = 284
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/253 (82%), Positives = 228/253 (90%), Gaps = 1/253 (0%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDA 106
+EVRTIFITGLP+DVKERE+QNLLRWLPG+EASQ+N+K EKPMGFALFS+ A+AAKD
Sbjct: 2 EEVRTIFITGLPEDVKEREIQNLLRWLPGFEASQLNFKAEKPMGFALFSSPHQAIAAKDI 61
Query: 107 LQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFH 166
LQ+M+FD ++KSVLHTEMAKKNLFVKRGI AD A+DQSKRLRT GDYTHTGY PSPFH
Sbjct: 62 LQDMLFDPDSKSVLHTEMAKKNLFVKRGIGADAVAFDQSKRLRTAGDYTHTGYVTPSPFH 121
Query: 167 APPAPVWGPHGY-MAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNT 225
PP PVWGPHGY PPPPPYDPY GY V PV MPAP + APSSYVPVQNTKDNPPCNT
Sbjct: 122 PPPPPVWGPHGYMAPPPPPPYDPYAGYPVAPVPMPAPVSIAAPSSYVPVQNTKDNPPCNT 181
Query: 226 LFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAV 285
LFIGNLGE+INEEE+RGLFS QPGFKQMK+LRQERHTVCFIEFEDVNSA++VHHNLQGAV
Sbjct: 182 LFIGNLGENINEEEVRGLFSVQPGFKQMKILRQERHTVCFIEFEDVNSATNVHHNLQGAV 241
Query: 286 IPSSGSVGMRIQY 298
IPSSGSVGMRIQY
Sbjct: 242 IPSSGSVGMRIQY 254
>gi|242081063|ref|XP_002445300.1| hypothetical protein SORBIDRAFT_07g008520 [Sorghum bicolor]
gi|241941650|gb|EES14795.1| hypothetical protein SORBIDRAFT_07g008520 [Sorghum bicolor]
Length = 320
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/298 (69%), Positives = 239/298 (80%), Gaps = 3/298 (1%)
Query: 1 MAGAGIHTYHQQWPPAPAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDD 60
MAGAGIH + QWPPA A PPPP AAA+ PPPP +A DEVRTIFITGLP D
Sbjct: 1 MAGAGIHPF--QWPPAAAAPPPPGAAASVAVPPPPPVPGAPGTVAADEVRTIFITGLPAD 58
Query: 61 VKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVL 120
VKEREL NLLRWLPG+EASQ+N+KG++PMGFALFS+A A+AAK ALQ+M+FDAET+ L
Sbjct: 59 VKERELHNLLRWLPGFEASQINFKGDQPMGFALFSSAHQAIAAKAALQDMVFDAETQVAL 118
Query: 121 HTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMA 180
HTEMAKKNLFVKRG+ D NA DQSKRLRTGGDYTH+ Y+ P P +WG GY+
Sbjct: 119 HTEMAKKNLFVKRGVGIDANAVDQSKRLRTGGDYTHSPYAPPFHPPPPAVSMWGTPGYIT 178
Query: 181 PPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEEL 240
PPPY+PY Y VPPV M +P+PV P++Y PVQNTKDNPPCNTLFIGNLG+++ EEEL
Sbjct: 179 -APPPYNPYAAYPVPPVAMTSPSPVTGPTAYAPVQNTKDNPPCNTLFIGNLGDTVVEEEL 237
Query: 241 RGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
R LFS QPG+KQMKVLRQ+R+TVCFIEFEDVN+A+SVH LQGAVIPSSG GMRIQ+
Sbjct: 238 RSLFSVQPGYKQMKVLRQDRNTVCFIEFEDVNAATSVHQTLQGAVIPSSGRGGMRIQF 295
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 2/122 (1%)
Query: 13 WPPAPAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDE-VRTIFITGLPDDVKERELQNLLR 71
+ P A P PP A + P P Y + T+FI L D V E EL++L
Sbjct: 183 YNPYAAYPVPPVAMTSPSPVTGPTAYAPVQNTKDNPPCNTLFIGNLGDTVVEEELRSLFS 242
Query: 72 WLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFV 131
PGY+ +V + + F F A + LQ + + + + + + KN F
Sbjct: 243 VQPGYKQMKVLRQDRNTVCFIEFEDVNAATSVHQTLQGAVIPSSGRGGMRIQFS-KNPFG 301
Query: 132 KR 133
+R
Sbjct: 302 RR 303
>gi|357467717|ref|XP_003604143.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355505198|gb|AES86340.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 309
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/301 (72%), Positives = 241/301 (80%), Gaps = 18/301 (5%)
Query: 1 MAGAGIHTYHQQWPPAPAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDD 60
MA GIH YHQQWPPA APPPP A +P + +EVRTIFITGLP+D
Sbjct: 1 MAANGIHPYHQQWPPAAAPPPPQPTAIPSP--------------SSEEVRTIFITGLPED 46
Query: 61 VKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVL 120
VKERELQNL RWLPG+EASQ+N+K EKPMGFALF++ A+AAKD LQ+M+FD E KSVL
Sbjct: 47 VKERELQNLCRWLPGFEASQLNFKAEKPMGFALFNSPHQAIAAKDILQDMLFDPEAKSVL 106
Query: 121 HTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMA 180
HTEMAKKNLFVKRG AD A+DQSKRLRT GDY HTGY PSPFH PP PVWGPHGYMA
Sbjct: 107 HTEMAKKNLFVKRG--ADAVAFDQSKRLRTAGDYNHTGYVTPSPFHPPPPPVWGPHGYMA 164
Query: 181 PPPPPYDPYGGYGVPPVQMPAPAPVP-APSSYVPVQNTKDNPPCNTLFIGNLGESINEEE 239
PPPPP P Q+P PAPV APSSYVP+QNTKDNPPCNTLFIGNLGE+INEEE
Sbjct: 165 PPPPPPYDPYAG-YPVAQVPMPAPVSIAPSSYVPIQNTKDNPPCNTLFIGNLGENINEEE 223
Query: 240 LRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYP 299
+RGLFS QPGFKQMK++RQERHTVCFIEFEDVNSA++VHHNLQGAVIPSSGS+G+ + P
Sbjct: 224 VRGLFSVQPGFKQMKIIRQERHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGIYSKNP 283
Query: 300 F 300
F
Sbjct: 284 F 284
>gi|168054248|ref|XP_001779544.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669025|gb|EDQ55620.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 268
Score = 320 bits (819), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 165/262 (62%), Positives = 191/262 (72%), Gaps = 17/262 (6%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDA 106
++VRTIF+ G P DVKERELQNLLRW PGYEASQ+N+K ++PMGFALFST +A+AA+DA
Sbjct: 1 EQVRTIFVLGFPSDVKERELQNLLRWWPGYEASQMNFKCDQPMGFALFSTVAMAMAARDA 60
Query: 107 LQEMIFDAETKSVLHTEMAKKNLFVKRGIVAD-TNAYDQSKRLRTGG-DYTHTGYSAPSP 164
LQ ++FDA+T SVL EMAKKNLFVKRG+ D ++D SKR+RTGG DY+ YSAP P
Sbjct: 61 LQNLVFDADTNSVLRAEMAKKNLFVKRGVAGDPCISFDGSKRMRTGGGDYSPAPYSAPYP 120
Query: 165 F------HAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVP-APSSYVPVQNT 217
P P W P Y P P YD YG Y AP P+P PS Y PVQNT
Sbjct: 121 STYLTQPMTSPTPAWAPQTY-GLPQPQYDQYGAY-------VAPQPLPITPSGYAPVQNT 172
Query: 218 KDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSV 277
KDNPPCNTLFIGNLGE++NE ELR LFS Q GF+QMKVLRQ ++ VCFIEF DVNSA V
Sbjct: 173 KDNPPCNTLFIGNLGEAVNEIELRALFSGQLGFRQMKVLRQGKNIVCFIEFLDVNSAMLV 232
Query: 278 HHNLQGAVIPSSGSVGMRIQYP 299
H NLQGAV+ +S GMRIQYP
Sbjct: 233 HTNLQGAVLSTSDRGGMRIQYP 254
>gi|125560763|gb|EAZ06211.1| hypothetical protein OsI_28451 [Oryza sativa Indica Group]
Length = 215
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 155/213 (72%), Positives = 178/213 (83%), Gaps = 2/213 (0%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRL 148
MGFALFS+A A+AAK ALQ+++FDAETK+ LHTEMAKKNLFVKRG+ D NA DQSKRL
Sbjct: 1 MGFALFSSAHHAIAAKSALQDLVFDAETKTALHTEMAKKNLFVKRGVGNDANAMDQSKRL 60
Query: 149 RTGGDYTHTGYSAPSPFHAPP-APVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPA 207
RTGGDYTH+ Y+AP PP +WG GY+A PPP Y+ Y Y VPPV M +P+PVP
Sbjct: 61 RTGGDYTHSPYAAPPYHPPPPAVSMWGTPGYIAAPPP-YNHYAAYSVPPVAMTSPSPVPG 119
Query: 208 PSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIE 267
P++Y PVQNTKDNPPCNTLFIGNLGE++ EEELR LFS QPG+KQMKVLRQ+R+TVCFIE
Sbjct: 120 PTAYAPVQNTKDNPPCNTLFIGNLGETVIEEELRSLFSVQPGYKQMKVLRQDRNTVCFIE 179
Query: 268 FEDVNSASSVHHNLQGAVIPSSGSVGMRIQYPF 300
FEDVN+AS+VHHNLQGAVIPSSG GMRIQYP
Sbjct: 180 FEDVNAASAVHHNLQGAVIPSSGRGGMRIQYPL 212
>gi|223949569|gb|ACN28868.1| unknown [Zea mays]
Length = 234
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/210 (71%), Positives = 170/210 (80%), Gaps = 1/210 (0%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRL 148
MGFALFSTA A+AAK ALQ+M+FDAETK LHTEMAKKNLFVKR + D NA DQSKRL
Sbjct: 1 MGFALFSTAHQAIAAKTALQDMVFDAETKVALHTEMAKKNLFVKRCVGIDANAVDQSKRL 60
Query: 149 RTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAP 208
RTGGDYTH+ Y+ P P +WG GY+ PPP Y+PY Y VPPV M +PAPV P
Sbjct: 61 RTGGDYTHSPYAPPFHPPPPAVSMWGTPGYITAPPP-YNPYAAYPVPPVAMTSPAPVTGP 119
Query: 209 SSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEF 268
++Y PVQNTKDNPPCNTLFIGNLG+++ EEELR LFS QPGFKQMKVLRQ+R+TVCFIEF
Sbjct: 120 TAYAPVQNTKDNPPCNTLFIGNLGDTVVEEELRSLFSVQPGFKQMKVLRQDRNTVCFIEF 179
Query: 269 EDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
EDVN+A+SVH LQGAVIPSSG GMRIQ+
Sbjct: 180 EDVNAATSVHQTLQGAVIPSSGRGGMRIQF 209
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 2/122 (1%)
Query: 13 WPPAPAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDE-VRTIFITGLPDDVKERELQNLLR 71
+ P A P PP A + P P Y + T+FI L D V E EL++L
Sbjct: 97 YNPYAAYPVPPVAMTSPAPVTGPTAYAPVQNTKDNPPCNTLFIGNLGDTVVEEELRSLFS 156
Query: 72 WLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFV 131
PG++ +V + + F F A + LQ + + + + + + KN F
Sbjct: 157 VQPGFKQMKVLRQDRNTVCFIEFEDVNAATSVHQTLQGAVIPSSGRGGMRIQFS-KNPFG 215
Query: 132 KR 133
+R
Sbjct: 216 RR 217
>gi|218200768|gb|EEC83195.1| hypothetical protein OsI_28448 [Oryza sativa Indica Group]
Length = 215
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/213 (73%), Positives = 178/213 (83%), Gaps = 2/213 (0%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRL 148
MGFALFS+A A+AAK ALQ++IFDAETK+ LHTEMAKKNLFVKRG+ D NA DQSKRL
Sbjct: 1 MGFALFSSAHHAIAAKAALQDLIFDAETKTALHTEMAKKNLFVKRGVGNDANAMDQSKRL 60
Query: 149 RTGGDYTHTGYSAPSPFHAPP-APVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPA 207
RTGGDYTH+ Y+AP PP +WG GY+A PPP Y+ Y Y VPPV M +P+PVP
Sbjct: 61 RTGGDYTHSPYAAPPYHPPPPAVSMWGTPGYIAAPPP-YNHYAAYSVPPVAMTSPSPVPG 119
Query: 208 PSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIE 267
P++Y PVQNTKDNPPCNTLFIGNLGE++ EEELR LFS QPG+KQMKVLRQ+R+TVCFIE
Sbjct: 120 PTAYAPVQNTKDNPPCNTLFIGNLGETVIEEELRSLFSVQPGYKQMKVLRQDRNTVCFIE 179
Query: 268 FEDVNSASSVHHNLQGAVIPSSGSVGMRIQYPF 300
FEDVN+AS+VHHNLQGAVIPSSG GMRIQYP
Sbjct: 180 FEDVNAASAVHHNLQGAVIPSSGRGGMRIQYPL 212
>gi|302789375|ref|XP_002976456.1| hypothetical protein SELMODRAFT_104881 [Selaginella moellendorffii]
gi|300156086|gb|EFJ22716.1| hypothetical protein SELMODRAFT_104881 [Selaginella moellendorffii]
Length = 350
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 168/284 (59%), Positives = 194/284 (68%), Gaps = 33/284 (11%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDAL 107
+VRTIF+ G P DVKERELQNLLRW PGYEASQ+N+KG++PMGFALFSTA +A+AA+DAL
Sbjct: 1 QVRTIFVLGFPPDVKERELQNLLRWWPGYEASQMNFKGDQPMGFALFSTASMAMAARDAL 60
Query: 108 Q--EMIFDAETKSVLHTEMAKKNLFVKR-------------------GIVADTNAYDQSK 146
Q ++FDA+ KSVL EMAKKNL+VKR GI A+ AYD SK
Sbjct: 61 QASNLVFDADAKSVLRAEMAKKNLYVKRGNFCDMSAHDFLFTVSGVTGINAEGTAYDHSK 120
Query: 147 RLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDPYGGY-GVPPVQMPAPAPV 205
R+RTGG+ T +P P P P GYMA P PYDPYG Y P
Sbjct: 121 RMRTGGECTPAYPPPFAPPPPPAWP---PQGYMA--PAPYDPYGSYPVAQVPPPVPPPAP 175
Query: 206 PAPSSYVPV-QNTKDNPPCNTLFIGNLGESINEEELRGLFS-----AQPGFKQMKVLRQE 259
AP+ Y PV QNTKDNPPCNTLFIGNLGE+ +E ELRGLFS +QPGF+QMKVLRQ
Sbjct: 176 VAPAGYAPVQQNTKDNPPCNTLFIGNLGEATSEAELRGLFSRQCLCSQPGFRQMKVLRQG 235
Query: 260 RHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYPFCCF 303
R TVCFIEF DVN+A +VH NLQGAV+ +S GMRIQYPF F
Sbjct: 236 RSTVCFIEFVDVNTAMAVHTNLQGAVLSTSDRGGMRIQYPFFGF 279
>gi|194708472|gb|ACF88320.1| unknown [Zea mays]
Length = 231
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 147/210 (70%), Positives = 167/210 (79%), Gaps = 4/210 (1%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRL 148
MGFALFSTA A+AAK ALQ+M+FDAETK LHTEMAKKNLFVKR + D NA DQSKRL
Sbjct: 1 MGFALFSTAHQAIAAKTALQDMVFDAETKVALHTEMAKKNLFVKRCVGIDANAVDQSKRL 60
Query: 149 RTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAP 208
RTGGDYTH+ Y+ P P +WG GY+ PPP Y+PY Y VPPV M +PAPV P
Sbjct: 61 RTGGDYTHSPYAPPFHPPPPAVSMWGTPGYITAPPP-YNPYAAYPVPPVAMTSPAPVTGP 119
Query: 209 SSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEF 268
++Y PVQ DNPPCNTLFIGNLG+++ EEELR LFS QPGFKQMKVLRQ+R+TVCFIEF
Sbjct: 120 TAYAPVQ---DNPPCNTLFIGNLGDTVVEEELRSLFSVQPGFKQMKVLRQDRNTVCFIEF 176
Query: 269 EDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
EDVN+A+SVH LQGAVIPSSG GMRIQ+
Sbjct: 177 EDVNAATSVHQTLQGAVIPSSGRGGMRIQF 206
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 11/125 (8%)
Query: 13 WPPAPAPPPPPAAAAAAPPPPPPVPY----DNTNRIAHDEVRTIFITGLPDDVKERELQN 68
+ P A P PP A + P P Y DN T+FI L D V E EL++
Sbjct: 97 YNPYAAYPVPPVAMTSPAPVTGPTAYAPVQDN------PPCNTLFIGNLGDTVVEEELRS 150
Query: 69 LLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKN 128
L PG++ +V + + F F A + LQ + + + + + + KN
Sbjct: 151 LFSVQPGFKQMKVLRQDRNTVCFIEFEDVNAATSVHQTLQGAVIPSSGRGGMRIQFS-KN 209
Query: 129 LFVKR 133
F +R
Sbjct: 210 PFGRR 214
>gi|302811155|ref|XP_002987267.1| hypothetical protein SELMODRAFT_125897 [Selaginella moellendorffii]
gi|300144902|gb|EFJ11582.1| hypothetical protein SELMODRAFT_125897 [Selaginella moellendorffii]
Length = 350
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 166/280 (59%), Positives = 192/280 (68%), Gaps = 33/280 (11%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDAL 107
+VRTIF+ G P DVKERELQNLLRW PGYEASQ+N+KG++PMGFALFSTA +A+AA+DAL
Sbjct: 1 QVRTIFVLGFPPDVKERELQNLLRWWPGYEASQMNFKGDQPMGFALFSTASMAMAARDAL 60
Query: 108 Q--EMIFDAETKSVLHTEMAKKNLFVKR-------------------GIVADTNAYDQSK 146
Q ++FDA+ KSVL EMAKKNL+VKR GI A+ AYD SK
Sbjct: 61 QASNLVFDADAKSVLRAEMAKKNLYVKRGNFYDMSAHDFLFTVSGVTGINAEGTAYDHSK 120
Query: 147 RLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDPYGGY-GVPPVQMPAPAPV 205
R+RTGG+ T +P P P P GYMA P PYDPYG Y P
Sbjct: 121 RMRTGGECTPAYPPPFAPPPPPAWP---PQGYMA--PAPYDPYGSYPVAQVPPPVPPPAP 175
Query: 206 PAPSSYVPV-QNTKDNPPCNTLFIGNLGESINEEELRGLFS-----AQPGFKQMKVLRQE 259
AP+ Y PV QNTKDNPPCNTLFIGNLGE+ +E ELRGLFS +QPGF+QMKVLRQ
Sbjct: 176 VAPAGYAPVQQNTKDNPPCNTLFIGNLGEATSEAELRGLFSRQCPCSQPGFRQMKVLRQG 235
Query: 260 RHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYP 299
R TVCFIEF DVN+A +VH NLQGAV+ +S GMRIQYP
Sbjct: 236 RSTVCFIEFVDVNTAMAVHTNLQGAVLSTSDRGGMRIQYP 275
>gi|294463303|gb|ADE77187.1| unknown [Picea sitchensis]
Length = 245
Score = 287 bits (735), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 143/210 (68%), Positives = 165/210 (78%), Gaps = 4/210 (1%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRL 148
MGFALFSTA +A+ A+DALQ ++FDA+T SVL EMAKKNL+VKR V+DTN +DQSKR+
Sbjct: 1 MGFALFSTAHMAIQARDALQNLVFDADTNSVLRAEMAKKNLYVKR--VSDTNNFDQSKRM 58
Query: 149 RTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAP 208
RTGGDYT Y AP F +PPA VWGP YMA YDPYGGY P Q+P AP
Sbjct: 59 RTGGDYTPAAYHAPGTFVSPPASVWGPQTYMASSTASYDPYGGY--PVAQVPPVPIPVAP 116
Query: 209 SSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEF 268
+ Y PVQN KDNPPCNTLFIGNLGE+ NE ELRGLFS QPGF+QMKVLRQER TVCFIE+
Sbjct: 117 AGYAPVQNMKDNPPCNTLFIGNLGENTNETELRGLFSGQPGFRQMKVLRQERSTVCFIEY 176
Query: 269 EDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
ED++SA++VH+NLQGAV+ SS GMRIQY
Sbjct: 177 EDLHSAAAVHNNLQGAVLSSSERGGMRIQY 206
>gi|307110907|gb|EFN59142.1| hypothetical protein CHLNCDRAFT_19159, partial [Chlorella
variabilis]
Length = 382
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 118/254 (46%), Positives = 160/254 (62%), Gaps = 5/254 (1%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDA 106
DEVRT+FI+G P+DV+EREL N+LR+LPGYEASQ++++ + GFALF++ LA AA DA
Sbjct: 2 DEVRTVFISGFPEDVRERELNNMLRFLPGYEASQMHFRNGQAQGFALFASGSLARAAVDA 61
Query: 107 LQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFH 166
+Q ++FD + VL EMA KN+ +R A + R DY T S PS +
Sbjct: 62 IQNLVFDNDC--VLRAEMAHKNMCARRRGAA-CRGPGAAPHDRAAADYLQTHRSRPSSYE 118
Query: 167 APPAPVWGPHGYMAPPPPPYDPYGGYG--VPPVQMPAPAPVPAPSSYVPVQNTKDNPPCN 224
A P P +G + A P P + GYG P Y P+ NTKDNPPCN
Sbjct: 119 AQPPPSYGGYQPAAAPAPAPFAHAGYGGLAAAPAAVVAVQPVQPRGYAPISNTKDNPPCN 178
Query: 225 TLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGA 284
TLFIGNLG+S++E E+RGLF QPGF+Q+K++R ++ CFIE+ D+ +A +VH QGA
Sbjct: 179 TLFIGNLGDSVSEAEMRGLFGHQPGFQQLKLVRGQKGMSCFIEYADIPTAMAVHDAQQGA 238
Query: 285 VIPSSGSVGMRIQY 298
++ SS G+RIQY
Sbjct: 239 ILSSSDRGGIRIQY 252
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMG-FALFSTAQLAVAAKDALQE 109
T+FI L D V E E++ L PG++ ++ +G+K M F ++ A+A DA Q
Sbjct: 179 TLFIGNLGDSVSEAEMRGLFGHQPGFQQLKL-VRGQKGMSCFIEYADIPTAMAVHDAQQG 237
Query: 110 MIFDAETKSVLHTEMAKKNLFVKR 133
I + + + + +K KR
Sbjct: 238 AILSSSDRGGIRIQYSKNPFGRKR 261
>gi|159475870|ref|XP_001696037.1| hypothetical protein CHLREDRAFT_104778 [Chlamydomonas reinhardtii]
gi|158275208|gb|EDP00986.1| predicted protein [Chlamydomonas reinhardtii]
Length = 269
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/259 (43%), Positives = 148/259 (57%), Gaps = 24/259 (9%)
Query: 45 AHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAK 104
A DEVRT+F+TG P DVKEREL NLLR+LPGYEASQ+NY GFALF++ A AA
Sbjct: 3 ATDEVRTVFVTGFPIDVKERELNNLLRFLPGYEASQMNYGKGSAQGFALFTSGAHARAAC 62
Query: 105 DALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLR-TGGDYTHTGYSAPS 163
D LQ + FD S L EMA+KN+++K + +KR R G GY P
Sbjct: 63 DQLQHVRFD--ENSSLRAEMARKNMYIK-------DMEPNAKRARPASGMVVTGGYGVP- 112
Query: 164 PFHAPP---APVWG-PHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKD 219
P P AP+W PH +AP GGY P P + D
Sbjct: 113 PSGGPSQRRAPLWLLPHRRVAPTA------GGYSRPG---SFGGPGGGGGAAAAAAARDD 163
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHH 279
NPPCNTLF+GNL +S++E ELR LFS PGF+Q+K++R + T+ F+EF+D SA + H+
Sbjct: 164 NPPCNTLFVGNLSDSVDENELRSLFSGSPGFRQLKLMRGPKATLGFVEFDDTGSAITAHN 223
Query: 280 NLQGAVIPSSGSVGMRIQY 298
Q A++ SS +R+Q+
Sbjct: 224 AQQNAMLNSSDRGPIRVQF 242
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 40/85 (47%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+F+ L D V E EL++L PG+ ++ + +GF F A+ A +A Q
Sbjct: 169 TLFVGNLSDSVDENELRSLFSGSPGFRQLKLMRGPKATLGFVEFDDTGSAITAHNAQQNA 228
Query: 111 IFDAETKSVLHTEMAKKNLFVKRGI 135
+ ++ + + + +K KR +
Sbjct: 229 MLNSSDRGPIRVQFSKNPFGRKRDV 253
>gi|302842092|ref|XP_002952590.1| hypothetical protein VOLCADRAFT_32205 [Volvox carteri f.
nagariensis]
gi|300262229|gb|EFJ46437.1| hypothetical protein VOLCADRAFT_32205 [Volvox carteri f.
nagariensis]
Length = 257
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 110/255 (43%), Positives = 145/255 (56%), Gaps = 9/255 (3%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYK---GEKPMGFALFSTAQLAVAA 103
+E+RTIF+TG P +V EREL NL+ +LPGYEASQ+N K G P GFALFS+ A AA
Sbjct: 1 EEIRTIFVTGFPSNVHERELHNLVCFLPGYEASQMNTKPATGTAPQGFALFSSHAHAQAA 60
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPS 163
L +M FD + L E+A KN+++K + + + S R + S
Sbjct: 61 MLTLHDMPFDTDCH--LRCEIAHKNMYLK--VRHEFRFFVFSLEYRFLRFFIRPSSLRSS 116
Query: 164 PFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPC 223
P P P + PP P P G P P PA S+ PV N DNPPC
Sbjct: 117 PVLTSPEPSFLKPQVTRPPVPSCVP-AGMAPPAFTSPLLGGAPA-VSFGPVTNKFDNPPC 174
Query: 224 NTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQG 283
NTLFIGNLG++++E EL +F QPG+KQ+K+LR R CF+EF D+ SAS+VH LQG
Sbjct: 175 NTLFIGNLGDTVDENELMQVFGNQPGYKQLKLLRHPRQVSCFVEFVDMASASAVHSRLQG 234
Query: 284 AVIPSSGSVGMRIQY 298
++ +S +RIQY
Sbjct: 235 CILHTSDRGPIRIQY 249
>gi|302834225|ref|XP_002948675.1| hypothetical protein VOLCADRAFT_104008 [Volvox carteri f.
nagariensis]
gi|300265866|gb|EFJ50055.1| hypothetical protein VOLCADRAFT_104008 [Volvox carteri f.
nagariensis]
Length = 332
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/252 (41%), Positives = 138/252 (54%), Gaps = 33/252 (13%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDA 106
+EVRTIF+TG P DVKEREL NLLR+LPGYEASQ+NY GFALF+T +A AA D
Sbjct: 63 EEVRTIFVTGFPADVKERELNNLLRFLPGYEASQMNYSKGAAQGFALFNTGAMARAACDQ 122
Query: 107 LQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFH 166
LQ + FD S L EMA+KN++++ + +KR R +AP
Sbjct: 123 LQHVRFD--ENSSLRCEMARKNMYIR--------DMEPNKRSRP---------NAPQAGG 163
Query: 167 APPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTL 226
G G P YG G S + DNPPCNTL
Sbjct: 164 FGGPGPAGAAGAAPAFGRPQASYGSAGA--------------RSGGDGGSRDDNPPCNTL 209
Query: 227 FIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVI 286
F+GNL E+++E ELR LF PGF+Q+K++R + T+ F+EF+DV +A + H QGAV+
Sbjct: 210 FVGNLSETVDENELRNLFGGAPGFRQLKLMRGPKATLGFVEFDDVPTAMAAHAAQQGAVL 269
Query: 287 PSSGSVGMRIQY 298
SS +R+QY
Sbjct: 270 ASSDRGPIRVQY 281
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+F+ L + V E EL+NL PG+ ++ + +GF F A+AA A Q
Sbjct: 208 TLFVGNLSETVDENELRNLFGGAPGFRQLKLMRGPKATLGFVEFDDVPTAMAAHAAQQGA 267
Query: 111 IFDAETKSVLHTEMAKKNLFVKRGI 135
+ + + + + +K KR +
Sbjct: 268 VLASSDRGPIRVQYSKNPFGRKRDV 292
>gi|28207154|gb|AAO37217.1| hypothetical protein [Arabidopsis thaliana]
gi|61742673|gb|AAX55157.1| hypothetical protein At2g42245 [Arabidopsis thaliana]
Length = 287
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 104/270 (38%), Positives = 137/270 (50%), Gaps = 34/270 (12%)
Query: 45 AHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-NYKGEKPMGFALFSTAQLAVAA 103
A DEVRT+F+ GLP+DVK RE+ NL R PGYE S + + G KP FA+FS Q AVA
Sbjct: 30 ARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSDGAKPFAFAVFSDLQSAVAV 89
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPS 163
AL M+FD E S LH ++AK N KR D ++ K+L++ T +G+
Sbjct: 90 MHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRTDD--GWESLKKLKSWNTTTESGF---- 143
Query: 164 PFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVP--APSSYVPVQNTKDNP 221
G P Y G P Q A V AP+S P +K
Sbjct: 144 -------------GSFQTPGMSSSAYNTIGYSPAQSQGIANVAGRAPTSRKP---SKAAD 187
Query: 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNL 281
PC TLFI N+G + E EL +FS GF ++K+ V F++F+DV+ +S H L
Sbjct: 188 PCPTLFIANMGPNCTEAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSEALHTL 247
Query: 282 QGAVIPSS--GSVGMRIQYP------FCCF 303
QG V+ SS G V +R+QYP F CF
Sbjct: 248 QGTVLYSSLTGEV-LRLQYPSLLPILFLCF 276
>gi|145331097|ref|NP_001078040.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|110737249|dbj|BAF00572.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330255000|gb|AEC10094.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 302
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/270 (38%), Positives = 137/270 (50%), Gaps = 34/270 (12%)
Query: 45 AHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-NYKGEKPMGFALFSTAQLAVAA 103
A DEVRT+F+ GLP+DVK RE+ NL R PGYE S + + G KP FA+FS Q AVA
Sbjct: 45 ARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSDGAKPFAFAVFSDLQSAVAV 104
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPS 163
AL M+FD E S LH ++AK N KR D ++ K+L++ T +G+
Sbjct: 105 MHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRTDD--GWESLKKLKSWNTTTESGF---- 158
Query: 164 PFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVP--APSSYVPVQNTKDNP 221
G P Y G P Q A V AP+S P +K
Sbjct: 159 -------------GSFQTPGMSSSAYNTIGYSPAQSQGIANVAGRAPTSRKP---SKAAD 202
Query: 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNL 281
PC TLFI N+G + E EL +FS GF ++K+ V F++F+DV+ +S H L
Sbjct: 203 PCPTLFIANMGPNCTEAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSEALHTL 262
Query: 282 QGAVIPSS--GSVGMRIQYP------FCCF 303
QG V+ SS G V +R+QYP F CF
Sbjct: 263 QGTVLYSSLTGEV-LRLQYPSLLPILFLCF 291
>gi|28207150|gb|AAO37215.1| hypothetical protein [Arabidopsis thaliana]
Length = 277
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/259 (38%), Positives = 133/259 (51%), Gaps = 28/259 (10%)
Query: 45 AHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-NYKGEKPMGFALFSTAQLAVAA 103
A DEVRT+F+ GLP+DVK RE+ NL R PGYE S + + G KP FA+FS Q AVA
Sbjct: 30 ARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSDGAKPFAFAVFSDLQSAVAV 89
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPS 163
AL M+FD E S LH ++AK N KR D ++ K+L++ T +G+
Sbjct: 90 MHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRTDD--GWESLKKLKSWNTTTESGF---- 143
Query: 164 PFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVP--APSSYVPVQNTKDNP 221
G P Y G P Q A V AP+S P +K
Sbjct: 144 -------------GSFQTPGMSSSAYNTIGYSPAQSQGIANVAGRAPTSRKP---SKAAD 187
Query: 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNL 281
PC TLFI N+G + E EL +FS GF ++K+ V F++F+DV+ +S H L
Sbjct: 188 PCPTLFIANMGPNCTEAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSEALHTL 247
Query: 282 QGAVIPSS--GSVGMRIQY 298
QG V+ SS G V +R+QY
Sbjct: 248 QGTVLYSSLTGEV-LRLQY 265
>gi|145361708|ref|NP_850366.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|62321263|dbj|BAD94469.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|110739960|dbj|BAF01884.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330254999|gb|AEC10093.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 292
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/259 (38%), Positives = 133/259 (51%), Gaps = 28/259 (10%)
Query: 45 AHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-NYKGEKPMGFALFSTAQLAVAA 103
A DEVRT+F+ GLP+DVK RE+ NL R PGYE S + + G KP FA+FS Q AVA
Sbjct: 45 ARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSDGAKPFAFAVFSDLQSAVAV 104
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPS 163
AL M+FD E S LH ++AK N KR D ++ K+L++ T +G+
Sbjct: 105 MHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRTDD--GWESLKKLKSWNTTTESGF---- 158
Query: 164 PFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVP--APSSYVPVQNTKDNP 221
G P Y G P Q A V AP+S P +K
Sbjct: 159 -------------GSFQTPGMSSSAYNTIGYSPAQSQGIANVAGRAPTSRKP---SKAAD 202
Query: 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNL 281
PC TLFI N+G + E EL +FS GF ++K+ V F++F+DV+ +S H L
Sbjct: 203 PCPTLFIANMGPNCTEAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSEALHTL 262
Query: 282 QGAVIPSS--GSVGMRIQY 298
QG V+ SS G V +R+QY
Sbjct: 263 QGTVLYSSLTGEV-LRLQY 280
>gi|186507399|ref|NP_001118504.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|330255001|gb|AEC10095.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 289
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/258 (38%), Positives = 132/258 (51%), Gaps = 28/258 (10%)
Query: 45 AHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-NYKGEKPMGFALFSTAQLAVAA 103
A DEVRT+F+ GLP+DVK RE+ NL R PGYE S + + G KP FA+FS Q AVA
Sbjct: 45 ARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSDGAKPFAFAVFSDLQSAVAV 104
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPS 163
AL M+FD E S LH ++AK N KR D ++ K+L++ T +G+
Sbjct: 105 MHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRTDD--GWESLKKLKSWNTTTESGF---- 158
Query: 164 PFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVP--APSSYVPVQNTKDNP 221
G P Y G P Q A V AP+S P +K
Sbjct: 159 -------------GSFQTPGMSSSAYNTIGYSPAQSQGIANVAGRAPTSRKP---SKAAD 202
Query: 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNL 281
PC TLFI N+G + E EL +FS GF ++K+ V F++F+DV+ +S H L
Sbjct: 203 PCPTLFIANMGPNCTEAELIQVFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSEALHTL 262
Query: 282 QGAVIPSS--GSVGMRIQ 297
QG V+ SS G V +R+Q
Sbjct: 263 QGTVLYSSLTGEV-LRLQ 279
>gi|116791286|gb|ABK25922.1| unknown [Picea sitchensis]
Length = 345
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 131/258 (50%), Gaps = 12/258 (4%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYK--GEKPMGFALFSTAQLAVAAK 104
DEVRT+FI GLPDDVK RE+ NL R PGY + Q+ G + F +F+ Q A+AA
Sbjct: 80 DEVRTLFIAGLPDDVKHREIYNLFREFPGYRSCQLRNSEGGTQVYAFTVFTDQQSALAAM 139
Query: 105 DALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLR----TGGDYTHTGYS 160
AL M FD ET++VL+ ++AK N KR D + KR+R G Y G
Sbjct: 140 HALNGMDFDPETRAVLYIDLAKSNSRSKRSRTDDGGSNSSDKRIRGPNSVPGVYPDAGVG 199
Query: 161 APSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDN 220
H P GY P GG + + S P Q N
Sbjct: 200 GT--VHMPG---MANSGYSDTSGFPSTQSGGMMEASIFQDGVPGLTTGQSTAPTQ-PASN 253
Query: 221 PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHN 280
PPC TLF+ NLG + +EEEL +FS PGF ++K+ V F++F+++ S++ ++
Sbjct: 254 PPCPTLFVANLGPTCSEEELTQVFSRCPGFLKLKMQIIGELPVAFVDFQEITSSTQALNH 313
Query: 281 LQGAVIPSSGSVGMRIQY 298
LQ A++ SS GMR+QY
Sbjct: 314 LQNAMLLSSDRGGMRLQY 331
>gi|297824185|ref|XP_002879975.1| hypothetical protein ARALYDRAFT_903572 [Arabidopsis lyrata subsp.
lyrata]
gi|297325814|gb|EFH56234.1| hypothetical protein ARALYDRAFT_903572 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 144/296 (48%), Gaps = 43/296 (14%)
Query: 15 PAPAPPPPPAAAAAAPPPPPPVPYDNTNRI---------AHDEVRTIFITGLPDDVKERE 65
PA PPP P A P+P + + + A DEVRT+F+ GLP+DVK RE
Sbjct: 12 PAIVPPPQPGVA--------PIPITSAHSVFLPTHVSIGARDEVRTLFVAGLPEDVKPRE 63
Query: 66 LQNLLRWLPGYEASQV-NYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEM 124
+ NL R PGYE S + + G KP FA+FS Q AV AL M+FD E S LH ++
Sbjct: 64 IYNLFREFPGYETSHLRSSDGAKPFAFAVFSDLQSAVTVMHALNGMVFDLEKYSTLHIDL 123
Query: 125 AKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAP--PAPVWGPHGYMAPP 182
AK N KR D ++ K+ + T +G+ + FH P + + GY
Sbjct: 124 AKSNPKSKRSRTDD--GWESLKKPKPWSTTTESGFGS---FHTPGMSSSTYNTIGY---- 174
Query: 183 PPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRG 242
P G+ V AP ++K PC TLFI N+G + E EL
Sbjct: 175 ----SPAQSQGIANVAGRAP---------TTGNSSKAADPCPTLFIANMGPNCTEAELIQ 221
Query: 243 LFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGS-VGMRIQ 297
+FS GF ++K+ V F++F+DV+ +S H LQG V+ SS + G+R+Q
Sbjct: 222 VFSRCRGFLKLKIQGTYGTPVAFVDFQDVSCSSEALHTLQGTVLYSSLTGEGLRLQ 277
>gi|224094288|ref|XP_002310126.1| predicted protein [Populus trichocarpa]
gi|222853029|gb|EEE90576.1| predicted protein [Populus trichocarpa]
Length = 323
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 133/258 (51%), Gaps = 20/258 (7%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAA 103
HD+VRT+F+ GLPDD+K RE+ NL R PGYE+S + + +P FA F+ AVAA
Sbjct: 69 HDQVRTLFVAGLPDDIKPREMYNLFREFPGYESSHLRTPSQNSQPFAFATFTDQPSAVAA 128
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT-NAYDQSKRLRTGGDYTHTGYSAP 162
AL M+FD E S L+ ++AK N KR D ++ D+ R+ +G+S
Sbjct: 129 MHALNGMVFDLEKGSTLYIDLAKSNSRSKRSRTDDEWSSLDKKARV-------SSGFSMG 181
Query: 163 SPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPS-SYVPVQNTKDNP 221
+P G + P + G P Q P + + S N P
Sbjct: 182 TPDSG--------FGSVHLPGMANSAFNTIGFPSAQSPGSIDDRSRNESKAGRMNNSSAP 233
Query: 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNL 281
PC TLF+ NLG++ EEEL +FS PGF ++K+ V F++F+D S++ ++L
Sbjct: 234 PCPTLFVANLGQNCTEEELIQVFSRCPGFLKLKMQSTYGAPVAFVDFQDTASSTGALNHL 293
Query: 282 QGAVIPSS-GSVGMRIQY 298
QG V+ SS G+R++Y
Sbjct: 294 QGTVLYSSVAGEGLRLEY 311
>gi|255587763|ref|XP_002534389.1| RNA binding protein, putative [Ricinus communis]
gi|223525395|gb|EEF27997.1| RNA binding protein, putative [Ricinus communis]
Length = 318
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 133/273 (48%), Gaps = 23/273 (8%)
Query: 33 PPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--KGEKPMG 90
PP VPY HD VRT+F+ GLP+DV RE+ NL R PGYE+S + + +P
Sbjct: 63 PPYVPY-----AGHDLVRTLFVAGLPEDVMPREIYNLFREFPGYESSHLRTPTQTSQPFA 117
Query: 91 FALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRT 150
FA F+ AVAA AL M+FD E S L+ ++AK N +SKR RT
Sbjct: 118 FATFADQPSAVAAMHALNGMVFDLEKGSTLYIDLAKSN--------------SRSKRSRT 163
Query: 151 GGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSS 210
++ A + P + G + P Y G PP Q A +
Sbjct: 164 ADEWPGLDKKAKASPAIPQSNFDSGFGSVHLPGMGNSAYNMIGYPPAQSHGTFDSRAKTE 223
Query: 211 YVPVQ-NTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+ N PPC TLF+ NLG + E+EL LFS GF ++K+ V F++F+
Sbjct: 224 TKSINSNNSSAPPCPTLFVANLGPNCTEQELTQLFSRFAGFLKLKMQSTYGAPVAFVDFQ 283
Query: 270 DVNSASSVHHNLQGAVIPSSGS-VGMRIQYPFC 301
D ++ ++LQG V+ SS S GMR++YPF
Sbjct: 284 DTACSTGALNHLQGTVLYSSTSGEGMRLEYPFL 316
>gi|356495478|ref|XP_003516604.1| PREDICTED: uncharacterized protein LOC100799471 [Glycine max]
Length = 332
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/266 (36%), Positives = 136/266 (51%), Gaps = 32/266 (12%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAKD 105
EVRT+F+ GLP+DVK RE+ NL R P YE+S + +P FA+F++ Q A+ AK
Sbjct: 71 EVRTLFVAGLPEDVKPREIYNLFREFPDYESSHLRSPSNSSQPFAFAVFASQQSAIMAKH 130
Query: 106 ALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPF 165
AL ++FD E S+L+ ++AK N KR + D R G D G + PS +
Sbjct: 131 ALNGLVFDLEKGSILYIDLAKSNSRSKRTRIDDE---------RAGADKKARGLT-PS-W 179
Query: 166 HAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSS------------YVP 213
P + V H M P +G P Q A S YVP
Sbjct: 180 ATPDSGVGSIH--MPGMGNPAFNTNMFGYPSAQSLGNADGSTMSGGLFANLKKSSTPYVP 237
Query: 214 VQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNS 273
+T PC TLF+ NLG S NE+EL +FS PGF ++K+ V F++F+DV S
Sbjct: 238 QNST----PCATLFVANLGSSCNEQELIQVFSRYPGFLKLKMQSTYGAPVAFVDFQDVGS 293
Query: 274 ASSVHHNLQGAVIPSSGS-VGMRIQY 298
++ ++LQG ++ SS S GMR++Y
Sbjct: 294 STDALNSLQGTILHSSQSGEGMRVEY 319
>gi|357482791|ref|XP_003611682.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355513017|gb|AES94640.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 340
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 134/269 (49%), Gaps = 17/269 (6%)
Query: 35 PVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--KGEKPMGFA 92
P P +TN +VRT+FI GLP+DVK RE+ NL R PGYE+S + + FA
Sbjct: 72 PSPLASTN-----DVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPNNSSQAFAFA 126
Query: 93 LFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGG 152
+FS Q A+ A AL MIFD E S L+ ++AK N KR + D A K+ R
Sbjct: 127 VFSNQQSAIMALHALNGMIFDLEKGSTLYIDLAKSNSRAKRARIDDDRA-SSDKKARGSA 185
Query: 153 DYTHTGYSAPSPFHAPPA--PVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSS 210
T S S H P P + + PP + G + P
Sbjct: 186 SSWPTPDSGVSSIHMPGMGNPAFNTNMIGYPPAQSHGIADGNAMHDGLFLNLKKCSNP-- 243
Query: 211 YVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFED 270
Y+P T PC TLF+ NLG S NE+EL +FS PGF ++K+ V F++F+D
Sbjct: 244 YIPTNTT----PCATLFVANLGPSCNEQELIQVFSRFPGFLKLKMQSTYGAPVSFVDFKD 299
Query: 271 VNSASSVHHNLQGAVIPSS-GSVGMRIQY 298
+ SA+ ++LQG ++ SS GMR++Y
Sbjct: 300 IPSATVALNSLQGTILYSSPAGEGMRLEY 328
>gi|356541768|ref|XP_003539345.1| PREDICTED: uncharacterized protein LOC100780983 [Glycine max]
Length = 338
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 136/266 (51%), Gaps = 32/266 (12%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAKD 105
EVRT+F+ GLP+DVK RE+ NL R PGYE+S + +P FA+F++ + A+ A
Sbjct: 77 EVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSPSNSSQPFAFAVFASQKSAILAMH 136
Query: 106 ALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPF 165
AL ++FD E S L+ ++AK N KR + D R G D G + PS +
Sbjct: 137 ALNGLVFDLEKGSTLYIDLAKSNSRSKRTRIDDE---------RVGADKKARGLT-PS-W 185
Query: 166 HAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSS------------YVP 213
P + V H M P +G P Q A A S Y+P
Sbjct: 186 STPDSGVGSIH--MPGMGNPAFNTNTFGYPSAQSLGNADGSAMSDSLFANLKKSSTPYIP 243
Query: 214 VQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNS 273
+T PC TLF+ NLG S NE+EL +FS PGF ++K+ V F++F+DV S
Sbjct: 244 QNST----PCATLFVANLGPSCNEQELIQVFSRYPGFLKLKMQSTYGAPVAFVDFQDVGS 299
Query: 274 ASSVHHNLQGAVIPSSGS-VGMRIQY 298
++ ++LQG ++ SS S GMR++Y
Sbjct: 300 STDALNSLQGTILHSSQSGEGMRLEY 325
>gi|326532978|dbj|BAJ89334.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 151/319 (47%), Gaps = 61/319 (19%)
Query: 20 PPPPAAAAAA-----PPPPPPVPYDNTNRIAH-------------------------DEV 49
PPPP AA+++ PPPP YD + H DE+
Sbjct: 8 PPPPRAASSSYATLPPPPPGTSSYDTYRQHEHAYLAAPPPPAYGGYFDRAEPLAPPRDEL 67
Query: 50 RTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-KGEKPMGFALFSTAQLAVAAKDALQ 108
RT+FI GLP DVK RE+ NL R PGY +S V K + FA+F A+AA A
Sbjct: 68 RTLFIAGLPADVKPREVYNLFRDFPGYVSSHVRSGKSAQSYAFAVFGDQPSALAAVSATN 127
Query: 109 EMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDY----THTGYSAPSP 164
++FD E +H ++AK N + SKR R+ DY TG A SP
Sbjct: 128 GLVFDLEKNCSIHVDLAKSN-----------SRSTSSKRPRS--DYEDFPKSTGKKARSP 174
Query: 165 FHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQM-----PAPAPVPAPSSYVPVQNTKD 219
P G + +M+ GY P Q + A PS + P ++
Sbjct: 175 -RGRPDSGAGSNNHMSGMGNSSHSLNGY---PAQSYTDFGSSAAFSKDPSMFAP----QN 226
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHH 279
NPPC TLF+ NLG++++E EL +FS GF ++K+ + V F++F+D +S++ +
Sbjct: 227 NPPCPTLFVANLGQTVSERELTDVFSGCEGFIKLKMQNKFGAPVAFVDFKDDHSSTEALN 286
Query: 280 NLQGAVIPSSGSVGMRIQY 298
LQGA++ SS GMR++Y
Sbjct: 287 RLQGAILHSSSGEGMRLEY 305
>gi|194697902|gb|ACF83035.1| unknown [Zea mays]
gi|413934630|gb|AFW69181.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
Length = 306
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 134/260 (51%), Gaps = 26/260 (10%)
Query: 45 AHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-KGEKPMGFALFSTAQLAVAA 103
A DEVRT+FI GLP D K RE+ NL R PGY +S + K + FA+F+ Q A+AA
Sbjct: 53 ARDEVRTLFIAGLPADAKPREVYNLFRDFPGYVSSHLRTGKSSQAYAFAVFADQQSALAA 112
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPS 163
A M+FD E LH ++AK N KR DT+ Y KR R P
Sbjct: 113 LSATNGMVFDLEKNCSLHVDLAKSNSRSKRLRSDDTSPYSPEKRNRK-----------PR 161
Query: 164 PFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQ----MPAPAPVPA-PSSYVPVQNTK 218
F P G + Y++ GY P Q + + A + PS++ P +
Sbjct: 162 GF---PDSGAGSNIYISGMGSTSHSLSGY--PSAQSYTSLESSASLSKDPSTFAP----Q 212
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+NPPC TLF+ NL + +E++L +FS+ GF ++K+ + V F++F+D S++
Sbjct: 213 NNPPCPTLFVANLAPACSEQQLIDVFSSCAGFVKLKMQNKLGAPVAFVDFKDAISSTEAI 272
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
+ LQG ++ SS GMR++Y
Sbjct: 273 NRLQGVILYSSSGEGMRLEY 292
>gi|148909446|gb|ABR17821.1| unknown [Picea sitchensis]
Length = 302
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 137/285 (48%), Gaps = 26/285 (9%)
Query: 26 AAAAPPPPPPVPYDNTNRIA---------HDE-VRTIFITGLPDDVKERELQNLLRWLPG 75
A APP P P N N+ H E VRT+FI+GLP+D+K RE+ NL R PG
Sbjct: 2 APVAPPLAPHSPLQNNNKKQTHSRHHNNNHKERVRTLFISGLPEDIKHREIYNLFRRRPG 61
Query: 76 YEASQVNY--KGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
+EA Q+ Y +G + + FA+FS QLA+AAKD L + FD ET + L+ E+A+ N +KR
Sbjct: 62 FEACQLKYTGRGYQIVAFAVFSHHQLALAAKDVLNGLTFDPETGATLNIELARTNSRIKR 121
Query: 134 GIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYG 193
D KR+R PF P G P + G
Sbjct: 122 SGTDDGGNGPYDKRIR-------------GPFGVPGVFDDDGVGETVKMPGSSNIVQSGG 168
Query: 194 VPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQM 253
V + P+ NPPC TLF+ NLG + E ELR + S GFK +
Sbjct: 169 VVGGSLAGEDGNSGPTKE-QAPGPGGNPPCPTLFVANLGPTCTEGELREVLSRFQGFKML 227
Query: 254 KVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
K+ + V F++FEDV S++ LQ ++PSS G+ ++Y
Sbjct: 228 KLQTKGGMPVAFVDFEDVTSSAEALKQLQDTLLPSSDRGGLHLEY 272
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 36/79 (45%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+F+ L E EL+ +L G++ ++ KG P+ F F + A LQ+
Sbjct: 199 TLFVANLGPTCTEGELREVLSRFQGFKMLKLQTKGGMPVAFVDFEDVTSSAEALKQLQDT 258
Query: 111 IFDAETKSVLHTEMAKKNL 129
+ + + LH E AK +
Sbjct: 259 LLPSSDRGGLHLEYAKSRM 277
>gi|449525690|ref|XP_004169849.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like, partial
[Cucumis sativus]
Length = 306
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 131/259 (50%), Gaps = 23/259 (8%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAK 104
+EVRT+FI GLP+DVK RE+ NL R PGYE+S + + +P FA+FS Q AV A
Sbjct: 65 NEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAM 124
Query: 105 DALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSP 164
A+ M+FD E +SVL+ ++AK N KR + Y K+ + + S P P
Sbjct: 125 HAVNGMVFDLEKQSVLYVDLAKSNSRSKR-TRTEEERYGSDKKAKV----SIIPRSTPDP 179
Query: 165 -FHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPC 223
+ G Y P +G + V A +P NPPC
Sbjct: 180 GLGSTHMSGMGNSAYNTIGYPSAQSHGSFDNKTVNDTVAANIP------------QNPPC 227
Query: 224 NTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQG 283
TLF+ NLG E+EL +F PGF ++K+ V F++F+D ++ ++LQG
Sbjct: 228 PTLFVANLGPGCTEQELIQIFLRCPGFLKLKMQSTYGAPVAFVDFQDTACSTGALNHLQG 287
Query: 284 AVIPSS--GSVGMRIQYPF 300
+++ SS G GMR++YPF
Sbjct: 288 SILYSSPPGE-GMRLEYPF 305
>gi|357125294|ref|XP_003564329.1| PREDICTED: uncharacterized protein LOC100840294 isoform 1
[Brachypodium distachyon]
Length = 302
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 141/304 (46%), Gaps = 29/304 (9%)
Query: 10 HQQWPPAPAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNL 69
H + PA APP AP P + + R V T+F+ GLPDDVK RE+ NL
Sbjct: 5 HHRLLPAAAPPLGDPYYVYAPHP-----HSDPQRQG---VVTLFVAGLPDDVKPREIHNL 56
Query: 70 LRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKK 127
PG++ + Y +G + F F T Q A++ AL +FD E LH E+AK
Sbjct: 57 FSRRPGFDQCLLEYTGRGNQVCAFVSFFTHQAALSTMLALNGTVFDPENGDCLHIELAKS 116
Query: 128 NLFVKRGIVADT-NAYDQS-KRLRTGGDYTHTGYSAPSPFHA-----------PPAPVWG 174
N + G D D+ R D H G S P+
Sbjct: 117 NSRRRHGGGGDVYRVIDKRVNRREVNADNEHIGDDDVSGEDEGEGKYGEGGSDEPSDTEN 176
Query: 175 PHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGES 234
+ P +G G+ + +P S+ P +++ D PPC+TLFI NLG++
Sbjct: 177 DNSSDKNELPADQRFGEPGIKQKKRQSP------SNDQPDKSSVDIPPCSTLFIENLGQT 230
Query: 235 INEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGM 294
EEEL +FS QPGF +K+ R+ F +F D+ S+++ +NLQG ++ SS S G+
Sbjct: 231 CTEEELEEVFSKQPGFHVLKMRRRGGMPAAFADFTDIESSTAAMNNLQGTILSSSDSDGL 290
Query: 295 RIQY 298
RI+Y
Sbjct: 291 RIEY 294
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+FI L E EL+ + PG+ ++ +G P FA F+ + + AA + LQ
Sbjct: 221 TLFIENLGQTCTEEELEEVFSKQPGFHVLKMRRRGGMPAAFADFTDIESSTAAMNNLQGT 280
Query: 111 IFDAETKSVLHTEMAKKNL 129
I + L E A+ +
Sbjct: 281 ILSSSDSDGLRIEYARSKM 299
>gi|296082378|emb|CBI21383.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 132/256 (51%), Gaps = 13/256 (5%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAK 104
DEVRT+FI GLP+DVK RE+ NL R PGYE+S + + +P FA+F Q A+AA
Sbjct: 75 DEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQNSQPFAFAVFLDQQSAIAAM 134
Query: 105 DALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSP 164
AL M+FD E S L+ ++AK N KR AD K+++ ++ S
Sbjct: 135 HALNGMVFDLEKGSTLYIDLAKSNSRSKRS-RADDERPGLDKKVKGSAGFSRPPDSGVGS 193
Query: 165 FHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSS-YVPVQNTKDNPPC 223
H P G Y P +G + + PA + S+ Y P T PC
Sbjct: 194 VHMPG---MGNSAYSMIGYPSTQSHGNFDGRALN-ETPAKLNNSSAPYFPQNAT----PC 245
Query: 224 NTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQG 283
TLF+ NLG + +E+EL +FS PGF ++K+ V F++F+D ++ ++LQG
Sbjct: 246 PTLFVANLGPTCSEQELIDIFSRCPGFLKLKMQSTYGTPVAFVDFQDTPCSTGALNHLQG 305
Query: 284 AVIPSS-GSVGMRIQY 298
V+ SS GMRI+Y
Sbjct: 306 TVLYSSPAGEGMRIEY 321
>gi|225438787|ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247532 [Vitis vinifera]
Length = 336
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 132/256 (51%), Gaps = 13/256 (5%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAK 104
DEVRT+FI GLP+DVK RE+ NL R PGYE+S + + +P FA+F Q A+AA
Sbjct: 78 DEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQNSQPFAFAVFLDQQSAIAAM 137
Query: 105 DALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSP 164
AL M+FD E S L+ ++AK N KR AD K+++ ++ S
Sbjct: 138 HALNGMVFDLEKGSTLYIDLAKSNSRSKRS-RADDERPGLDKKVKGSAGFSRPPDSGVGS 196
Query: 165 FHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSS-YVPVQNTKDNPPC 223
H P G Y P +G + + PA + S+ Y P T PC
Sbjct: 197 VHMPG---MGNSAYSMIGYPSTQSHGNFDGRALN-ETPAKLNNSSAPYFPQNAT----PC 248
Query: 224 NTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQG 283
TLF+ NLG + +E+EL +FS PGF ++K+ V F++F+D ++ ++LQG
Sbjct: 249 PTLFVANLGPTCSEQELIDIFSRCPGFLKLKMQSTYGTPVAFVDFQDTPCSTGALNHLQG 308
Query: 284 AVIPSS-GSVGMRIQY 298
V+ SS GMRI+Y
Sbjct: 309 TVLYSSPAGEGMRIEY 324
>gi|414870052|tpg|DAA48609.1| TPA: hypothetical protein ZEAMMB73_404025 [Zea mays]
Length = 665
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/129 (55%), Positives = 88/129 (68%), Gaps = 3/129 (2%)
Query: 11 QQWPPAPAPPPPPAAAAAAP-PPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNL 69
QQWPP A P P + A+ PP PP+P ++ +A DEV TIF+ LP DVKE E+ NL
Sbjct: 428 QQWPPTGAVLPLPGSTASVTNPPSPPIP-GASDIVAADEVCTIFM-DLPIDVKETEMHNL 485
Query: 70 LRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNL 129
L WL G+EA ++N+KG +PMGFALFST A+ AK Q+ +FD ETK VL T+MAKKNL
Sbjct: 486 LCWLLGFEAFEMNFKGNQPMGFALFSTVHQAITAKAMFQDTVFDTETKVVLQTDMAKKNL 545
Query: 130 FVKRGIVAD 138
FVKR D
Sbjct: 546 FVKRSNQLD 554
>gi|449447844|ref|XP_004141677.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cucumis
sativus]
Length = 262
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 121/252 (48%), Gaps = 24/252 (9%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAKDA 106
+ T+FI+GLPDDVK RE+ NL R PG+++ Q+ Y +G + + FA F Q AV A A
Sbjct: 25 INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHA 84
Query: 107 LQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFH 166
L + FD ++ SVLH E+A+ N S+R G +
Sbjct: 85 LNGVKFDPQSGSVLHIELARSN----------------SRRKHKPGGGAYVVIDKRKKTD 128
Query: 167 APPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTL 226
A G P P V PA A + AP + D PC+TL
Sbjct: 129 ANSQETSSDDGGSEPDEPS--KKAQQSNEAVVTPANA-ISAPYEH---HEKNDGGPCSTL 182
Query: 227 FIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVI 286
FI NLG + NE+EL+ + PGF +K+ + V F +FED+ AS V LQG+V+
Sbjct: 183 FIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVL 242
Query: 287 PSSGSVGMRIQY 298
PSS GM I+Y
Sbjct: 243 PSSDRGGMHIEY 254
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 21/111 (18%)
Query: 185 PYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLF 244
PYDPY Y P P + + N NTLFI L + + E+ LF
Sbjct: 5 PYDPYYLYNQPD----------------PTYSERSN--INTLFISGLPDDVKAREIHNLF 46
Query: 245 SAQPGFK--QMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVI-PSSGSV 292
+PGF Q+K + V F F + SA + H L G P SGSV
Sbjct: 47 RRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSV 97
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 44/104 (42%)
Query: 26 AAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKG 85
A P PY++ + T+FI L + E EL+ +L PG+ ++ K
Sbjct: 156 AVVTPANAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKS 215
Query: 86 EKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNL 129
P+ FA F + A + LQ + + + +H E A+ +
Sbjct: 216 GMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKM 259
>gi|357125296|ref|XP_003564330.1| PREDICTED: uncharacterized protein LOC100840294 isoform 2
[Brachypodium distachyon]
Length = 261
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 137/291 (47%), Gaps = 44/291 (15%)
Query: 10 HQQWPPAPAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNL 69
H + PA APP AP P + + R V T+F+ GLPDDVK RE+ NL
Sbjct: 5 HHRLLPAAAPPLGDPYYVYAPHP-----HSDPQRQG---VVTLFVAGLPDDVKPREIHNL 56
Query: 70 LRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKK 127
PG++ + Y +G + F F T Q A++ AL +FD E LH E+AK
Sbjct: 57 FSRRPGFDQCLLEYTGRGNQVCAFVSFFTHQAALSTMLALNGTVFDPENGDCLHIELAKS 116
Query: 128 NLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYD 187
N R R GG+ G PS + P D
Sbjct: 117 N-----------------SRRRHGGE---GGSDEPSDTENDNSSDKNE--------LPAD 148
Query: 188 PYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQ 247
G G+ + +P S+ P +++ D PPC+TLFI NLG++ EEEL +FS Q
Sbjct: 149 QSGEPGIKQKKRQSP------SNDQPDKSSVDIPPCSTLFIENLGQTCTEEELEEVFSKQ 202
Query: 248 PGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
PGF +K+ R+ F +F D+ S+++ +NLQG ++ SS S G+RI+Y
Sbjct: 203 PGFHVLKMRRRGGMPAAFADFTDIESSTAAMNNLQGTILSSSDSDGLRIEY 253
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+FI L E EL+ + PG+ ++ +G P FA F+ + + AA + LQ
Sbjct: 180 TLFIENLGQTCTEEELEEVFSKQPGFHVLKMRRRGGMPAAFADFTDIESSTAAMNNLQGT 239
Query: 111 IFDAETKSVLHTEMAKKNL 129
I + L E A+ +
Sbjct: 240 ILSSSDSDGLRIEYARSKM 258
>gi|449480586|ref|XP_004155937.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
B''-like [Cucumis sativus]
Length = 262
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 121/252 (48%), Gaps = 24/252 (9%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAKDA 106
+ T+FI+GLPDDVK RE+ NL R PG+++ Q+ Y +G + + FA F Q AV A A
Sbjct: 25 INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHA 84
Query: 107 LQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFH 166
L + FD ++ SVLH E+A+ N S+R G +
Sbjct: 85 LNGVKFDPQSGSVLHIELARSN----------------SRRKHKPGGGAYVVIDKRKKPX 128
Query: 167 APPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTL 226
A G P P V PA A + AP + D PC+TL
Sbjct: 129 ANSQETSSDDGGSEPDEPS--KKAQQSNEAVVTPANA-ISAPYEH---HEKNDGGPCSTL 182
Query: 227 FIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVI 286
FI NLG + NE+EL+ + PGF +K+ + V F +FED+ AS V LQG+V+
Sbjct: 183 FIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVL 242
Query: 287 PSSGSVGMRIQY 298
PSS GM I+Y
Sbjct: 243 PSSDRGGMHIEY 254
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 21/111 (18%)
Query: 185 PYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLF 244
PYDPY Y P P + + N NTLFI L + + E+ LF
Sbjct: 5 PYDPYYLYNQPD----------------PTYSERSN--INTLFISGLPDDVKAREIHNLF 46
Query: 245 SAQPGFK--QMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVI-PSSGSV 292
+PGF Q+K + V F F + SA + H L G P SGSV
Sbjct: 47 RRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSV 97
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 44/104 (42%)
Query: 26 AAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKG 85
A P PY++ + T+FI L + E EL+ +L PG+ ++ K
Sbjct: 156 AVVTPANAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKS 215
Query: 86 EKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNL 129
P+ FA F + A + LQ + + + +H E A+ +
Sbjct: 216 GMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKM 259
>gi|242093984|ref|XP_002437482.1| hypothetical protein SORBIDRAFT_10g027920 [Sorghum bicolor]
gi|241915705|gb|EER88849.1| hypothetical protein SORBIDRAFT_10g027920 [Sorghum bicolor]
Length = 310
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 132/260 (50%), Gaps = 26/260 (10%)
Query: 45 AHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-KGEKPMGFALFSTAQLAVAA 103
A DE+RT+FI GLP D K RE+ NL R PGY +S + K + FA+F+ Q A+ A
Sbjct: 57 ARDELRTLFIAGLPADAKPREVYNLFRDFPGYVSSHLRTGKSSQAYAFAVFADQQSALTA 116
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPS 163
M+FD E LH ++AK N KR DT+ Y KR R P
Sbjct: 117 LSGTNGMVFDLEKNCSLHVDLAKSNSRSKRLRSDDTSPYSPEKRTRK-----------PR 165
Query: 164 PFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQ----MPAPAPVPA-PSSYVPVQNTK 218
F P G + Y++ GY P Q + + A + PS++ P +
Sbjct: 166 GF---PDSGAGSNIYISGMGSSSHSLSGY--PSAQSYTSLESSASLSKDPSTFAP----Q 216
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
NPPC TLF+ NLG + +E+EL +FS+ GF ++K+ + V F++F+D S++
Sbjct: 217 INPPCPTLFVANLGPACSEQELIDVFSSCAGFVKLKMQNKLGAPVAFVDFKDSISSTEAI 276
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
+ LQG ++ SS GMR++Y
Sbjct: 277 NRLQGVILYSSLGEGMRLEY 296
>gi|384493858|gb|EIE84349.1| hypothetical protein RO3G_09059 [Rhizopus delemar RA 99-880]
Length = 387
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 152/353 (43%), Gaps = 83/353 (23%)
Query: 19 PPPPPAAAAAAP-PPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYE 77
P PP +AA +P PVP D V TIF+ G PDD++ERE QN+ + G+E
Sbjct: 16 PSSPPLSAAQSPFSGTSPVPED---------VTTIFVVGFPDDMQEREFQNMFLFSKGFE 66
Query: 78 AS----------QVNYKGEKPM-GFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAK 126
+ + N +K M GFA F+T A+ A D L D E SVL EMAK
Sbjct: 67 GASLKWHCKQDEETNENNKKQMIGFARFATRSEAIEAVDILNGRKVDLEKSSVLKAEMAK 126
Query: 127 KNLFVKRG----------IVADTNAYDQSKRLRTGGDY-----THTGYSAPSPFHAPPAP 171
KNL +K+G + NA ++ +L G Y H + P +
Sbjct: 127 KNLHIKKGTNSSATIAPMTIGTRNASQKNPKL-VGIQYEPFSPIHDSFFREHPLFSTSRS 185
Query: 172 ---------------------------VWGPHGYMAPPPPPYDPYGGYGVP-----PV-- 197
++ +M P P Y +P P+
Sbjct: 186 QSIDAGRNTIISPPPPPQSPFQQQPFHLFSKSAFMMDPEPDSFHYLSKSLPMSNVDPILE 245
Query: 198 -QMPAPAPVPAPSSYVPVQNTK---------DNPPCNTLFIGNLGESINEEELRGLFSAQ 247
++P + +S+ P T NPPCNTL++GNL S N+EELR LFS
Sbjct: 246 NKLPDDVSMSRKNSFQPTATTSLSRLAAVVDQNPPCNTLYVGNLPSSTNQEELRSLFSKC 305
Query: 248 PGFKQM--KVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
G+K+M ++ ++ +CF+EFEDV A+ LQG + +S G+R+ +
Sbjct: 306 EGYKRMSFRIKSPQQGPMCFVEFEDVLYATQAMTQLQGHALSNSVKGGIRLSF 358
>gi|384253459|gb|EIE26934.1| hypothetical protein COCSUDRAFT_12206, partial [Coccomyxa
subellipsoidea C-169]
Length = 253
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 69/89 (77%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
SYVPV NTKDNPPCNTLFIGNL E+ NE+ELRGLF QPGF+Q+K++R R CF+EF
Sbjct: 128 SYVPVNNTKDNPPCNTLFIGNLSENTNEDELRGLFVGQPGFRQLKLVRGARSVTCFVEFS 187
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
DV SA VH + QGAV+ +S G+RIQY
Sbjct: 188 DVASAMGVHQSQQGAVLSTSDRGGIRIQY 216
>gi|356526031|ref|XP_003531623.1| PREDICTED: uncharacterized protein LOC100783764 [Glycine max]
Length = 264
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 132/266 (49%), Gaps = 36/266 (13%)
Query: 46 HDE---VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGE--KPMGFALFSTAQLA 100
HDE + T+F++GLPDDVK RE+ NL R PG+++ Q+ Y G + + FA F Q A
Sbjct: 14 HDEQSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQVVAFATFFNHQSA 73
Query: 101 VAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRG------IVADTNAYDQSKRLRTGGDY 154
+AA AL + FD +T SVLH E+A+ N KR +V D R+ G+
Sbjct: 74 MAALHALNGVKFDPQTGSVLHIELARSNSRRKRKPGSGAYVVIDK---------RSKGEP 124
Query: 155 THTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPV 214
G S+ + P P D G + V + ++
Sbjct: 125 DLQGSSSEDG--------------DSDPDEPSDSGDNQGDLAIMTSDETAVGSDNAVSVE 170
Query: 215 QNTKDNPP--CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVN 272
Q+ K + C+TLFI NLG + E+EL+ FSA GF +K+ + V F++FE+ +
Sbjct: 171 QHGKGSTGGLCSTLFIANLGPNCTEDELKQAFSAYTGFNMVKMRSRGGMPVAFVDFEETH 230
Query: 273 SASSVHHNLQGAVIPSSGSVGMRIQY 298
A+ V LQG+++PSS GM I+Y
Sbjct: 231 QAAKVMEELQGSLLPSSDRGGMHIEY 256
>gi|225442319|ref|XP_002279868.1| PREDICTED: uncharacterized protein LOC100263499 [Vitis vinifera]
gi|297743102|emb|CBI35969.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 125/259 (48%), Gaps = 23/259 (8%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAKDA 106
+ T+F++GLPDDVK RE+ NL R PG+++ Q+ Y +G + + FA F Q AVAA A
Sbjct: 20 INTLFVSGLPDDVKPREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFFNHQTAVAALHA 79
Query: 107 LQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFH 166
L + FD +T S+LH E+A+ N + KR+ G Y + + +
Sbjct: 80 LNGVKFDPQTGSILHIELARSN--------------SRRKRVPGSGAYVVIDKRSKTSTN 125
Query: 167 APPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQN-----TKDN- 220
A P +P G V + P S + N T D
Sbjct: 126 AHETSSDDGDSESDEPAKTSNPDSGNNDDLVTAKSGEMAVDPDSTLTAVNEQPEKTTDAG 185
Query: 221 -PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHH 279
PPC+TLFI NLG + E+EL+ + S PGF +K+ + V F +FE++ A+
Sbjct: 186 LPPCSTLFIANLGPTCTEDELKQVLSQYPGFNVLKMRAKGGMPVAFADFEEIEQANKAMD 245
Query: 280 NLQGAVIPSSGSVGMRIQY 298
LQG+++ SS GM ++Y
Sbjct: 246 ALQGSMLASSDRGGMHLEY 264
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+FI L E EL+ +L PG+ ++ KG P+ FA F + A A DALQ
Sbjct: 191 TLFIANLGPTCTEDELKQVLSQYPGFNVLKMRAKGGMPVAFADFEEIEQANKAMDALQGS 250
Query: 111 IFDAETKSVLHTEMAKKNL 129
+ + + +H E A+ +
Sbjct: 251 MLASSDRGGMHLEYARSKM 269
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFK--QMKVLRQERHTVCFIEFEDVNSASS 276
D NTLF+ L + + E+ LF +PGF Q+K + V F F + +A +
Sbjct: 16 DRSGINTLFVSGLPDDVKPREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFFNHQTAVA 75
Query: 277 VHHNLQGAVI-PSSGSV 292
H L G P +GS+
Sbjct: 76 ALHALNGVKFDPQTGSI 92
>gi|115466456|ref|NP_001056827.1| Os06g0151200 [Oryza sativa Japonica Group]
gi|55296621|dbj|BAD69323.1| RNA-binding protein-like [Oryza sativa Japonica Group]
gi|55297274|dbj|BAD69059.1| RNA-binding protein-like [Oryza sativa Japonica Group]
gi|113594867|dbj|BAF18741.1| Os06g0151200 [Oryza sativa Japonica Group]
gi|215697009|dbj|BAG91003.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 300
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 135/289 (46%), Gaps = 24/289 (8%)
Query: 30 PPPP-------PPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVN 82
PPPP P PY + R V T+F+ GLPDDVK RE+ NL PG++ +
Sbjct: 8 PPPPGDPYYVYAPHPYPDPQRQG---VLTLFVAGLPDDVKPREIHNLFSSRPGFDHCLLE 64
Query: 83 Y--KGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTN 140
Y +G + + F F Q A++A AL +FD +T LH E+AK + + G
Sbjct: 65 YTGRGNQVVAFVSFVNHQAALSAMSALNGTVFDPDTGDRLHIELAKSSSRKRHGDGGVYR 124
Query: 141 AYDQS-KRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQM 199
D+ KR D+ + G + A G + P D ++
Sbjct: 125 VVDKRLKRKERAADHENAG-DGGNDDDAWGEDDNGGNDGDGGSDEPLDTENDDSDEKNEL 183
Query: 200 PAPAPVPAP----------SSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPG 249
PA P S P + + D PPC+TLF+ NLG S EEEL+ + S QPG
Sbjct: 184 PAERSSGQPGLKQHRGQSLSDDQPDKLSSDIPPCSTLFVANLGHSCTEEELKEVLSKQPG 243
Query: 250 FKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
F +K+ R+ V F +F D+ S+++ LQG V+ SS + G++I+Y
Sbjct: 244 FHLLKMRRRGGMPVAFADFTDIESSTAAMDALQGTVLASSDADGLQIEY 292
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+F+ L E EL+ +L PG+ ++ +G P+ FA F+ + + AA DALQ
Sbjct: 219 TLFVANLGHSCTEEELKEVLSKQPGFHLLKMRRRGGMPVAFADFTDIESSTAAMDALQGT 278
Query: 111 IFDAETKSVLHTEMAKKNL 129
+ + L E A+ +
Sbjct: 279 VLASSDADGLQIEYARSKM 297
>gi|363814370|ref|NP_001242824.1| uncharacterized protein LOC100810989 [Glycine max]
gi|255636681|gb|ACU18677.1| unknown [Glycine max]
Length = 265
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 134/282 (47%), Gaps = 37/282 (13%)
Query: 28 AAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGE- 86
A PP P Y + ++ + T+F++GLPDDVK RE+ NL R PG+++ Q+ Y G
Sbjct: 2 AHPPLDPYYLYQQQDERSN--INTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRA 59
Query: 87 -KPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQS 145
+ + FA F Q A+AA AL + FD +T SVLH E+A+ N S
Sbjct: 60 NQVVAFATFFNHQSAMAALHALNGVKFDPQTGSVLHIELARSN----------------S 103
Query: 146 KRLRT-GG------DYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQ 198
+R R GG D TG P + P P D G +
Sbjct: 104 RRKRKPGGEACVVIDKRSTG--------EPDLQGSSSDDGDSDPDEPSDSGDNQGNIAIM 155
Query: 199 MPAPAPVPAPSSYVPVQNTKDNPP--CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVL 256
V + ++ Q+ K + C+TLFI NLG + E+EL+ FS GF +K+
Sbjct: 156 TSDETAVGSDNAVSVEQHGKGSAGGLCSTLFIANLGPNCTEDELKQAFSVYTGFNMVKMR 215
Query: 257 RQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+ V F++FE+ + A+ V LQG+++PSS GM I+Y
Sbjct: 216 SRGGMPVAFVDFEETDQAAKVVEELQGSLLPSSDRGGMHIEY 257
>gi|297608262|ref|NP_001061371.2| Os08g0249400 [Oryza sativa Japonica Group]
gi|255678286|dbj|BAF23285.2| Os08g0249400, partial [Oryza sativa Japonica Group]
Length = 95
Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats.
Identities = 57/70 (81%), Positives = 65/70 (92%)
Query: 229 GNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPS 288
GNLGE++ EEELR LFS QPG+KQMKVLRQ+R+TVCFIEFEDVN+AS+VHHNLQGAVIPS
Sbjct: 1 GNLGETVIEEELRSLFSVQPGYKQMKVLRQDRNTVCFIEFEDVNAASAVHHNLQGAVIPS 60
Query: 289 SGSVGMRIQY 298
SG GMRIQ+
Sbjct: 61 SGRGGMRIQF 70
>gi|317106697|dbj|BAJ53198.1| JHL03K20.7 [Jatropha curcas]
Length = 316
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 134/264 (50%), Gaps = 28/264 (10%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVN--YKGEKPMGFALFSTAQLAVAA 103
HD VRT+F+ GLPDDVK RE+ NL R PGYE+S + + +P FA F AVAA
Sbjct: 72 HDPVRTLFVAGLPDDVKPREIYNLFREFPGYESSHLRSPTQTSQPFAFATFIDQPSAVAA 131
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLR----TGGDYTHTGY 159
AL M+FD E S L+ ++AK N + +D KR++ T G +G+
Sbjct: 132 MHALNGMVFDLEKGSTLYIDLAKSNS-RSKRSRSDDEWSGLDKRVKASPATPGGSLDSGF 190
Query: 160 SAPSPFHAP--PAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNT 217
+ H P + GY +P +G+ + A P A SS
Sbjct: 191 GS---VHLPGMSNSAYNMIGYTSPQ--------SHGIFDSR-AASEPTGANSS------N 232
Query: 218 KDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSV 277
PPC TLF+ NLG + E+EL +FS PGF ++K+ V F++F+D + ++
Sbjct: 233 SSAPPCPTLFVANLGPNCMEQELIQVFSRCPGFLKLKMQSTYGAPVAFVDFQDTSCSTGA 292
Query: 278 HHNLQGAVIPSS-GSVGMRIQYPF 300
++LQG ++ SS GMR++YPF
Sbjct: 293 LNHLQGTILYSSPAGDGMRLEYPF 316
>gi|413918505|gb|AFW58437.1| hypothetical protein ZEAMMB73_336478 [Zea mays]
Length = 242
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 83/131 (63%), Gaps = 14/131 (10%)
Query: 15 PAPAPPPPPAA---AAAAP---------PPPPPVPYDNTNRIAHDEVRTIFITGLPDDVK 62
P APP P A A P P PVP ++ +A DEV TIF+ LP DVK
Sbjct: 38 PLAAPPVPTVAIHGGCATPARVHDLGHQPTASPVP-GASDIVAADEVCTIFM-DLPADVK 95
Query: 63 ERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHT 122
EREL NLL WL G+E S++N+KG +PMGFALFST A+ AK Q+ +FDAETK L T
Sbjct: 96 ERELHNLLCWLLGFETSEMNFKGNQPMGFALFSTVHQAITAKAMFQDTVFDAETKVALQT 155
Query: 123 EMAKKNLFVKR 133
+MAKKNLFVKR
Sbjct: 156 DMAKKNLFVKR 166
>gi|388496982|gb|AFK36557.1| unknown [Medicago truncatula]
Length = 268
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 127/264 (48%), Gaps = 38/264 (14%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGE--KPMGFALFSTAQLAVAAKDA 106
+ T+F++GLPDDVK RE+ NL R PG+++ Q+ Y G + + FA F Q A+ A +
Sbjct: 20 INTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQVVAFATFFNHQAAMQALHS 79
Query: 107 LQEMIFDAETKSVLHTEMAKKNLFVKRG------IVADTNAYDQSKRLRTGGDYTHTGYS 160
L + FD ++ SVLH E+A+ N KR +V D + ++ G + G S
Sbjct: 80 LNGVKFDPQSGSVLHIELARSNSRRKRKPGGGAYVVIDKRSKGEAN---VQGSSSDDGES 136
Query: 161 APSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTK-- 218
P P+ HG +A + V ++VPV +
Sbjct: 137 DPDE----PSENGSNHGDIATAQ-----------------SGDAVVGSDNHVPVARAQHG 175
Query: 219 ----DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSA 274
D PC+TLFI NLG + E+EL+ S GF +K+ + V F +FE+++ A
Sbjct: 176 KGGGDGGPCSTLFIANLGPNCTEDELKQALSVYAGFNLVKMRSRGGMPVAFADFEEIDQA 235
Query: 275 SSVHHNLQGAVIPSSGSVGMRIQY 298
V LQG+ +PSS GM I+Y
Sbjct: 236 VKVMEELQGSSLPSSDRGGMHIEY 259
>gi|427782383|gb|JAA56643.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 326
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 143/302 (47%), Gaps = 45/302 (14%)
Query: 39 DNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEAS-----QVNYKGEKPMGFAL 93
D+ N +A +EVRT+F++GLP D K REL L R GYE S Q N K P+GF
Sbjct: 17 DSVNTVAEEEVRTLFVSGLPMDAKPRELYLLFRAYKGYEGSLLKVTQKNGKTSSPVGFVT 76
Query: 94 FSTAQLAVAAKDALQEMI-FDAETKSVLHTEMAKKNLFVKR-------------GIVADT 139
FS+ A AAK LQ+ + FD + + E AK N V + ++
Sbjct: 77 FSSRAGAEAAKQELQQGVRFDPDLPQTIRLEFAKSNTKVSKPKQQSPPAAATHPTLLHPI 136
Query: 140 NAYDQSKRLRTGGDYTHTGY--------SAPSPFHAPPAPVWGPHGYMAPPPPPYDPY-- 189
+ S L G TH G+ P A + P + PPP P+
Sbjct: 137 TGQEISAALLPG---THDGWPHHPLSYAEVPVTTTLHTAALMHPALHAQLPPPLTVPHPL 193
Query: 190 ------GGYGVPPVQMPAPAPVPAPSSYVPVQNTKDN-------PPCNTLFIGNLGESIN 236
G MP P V +P+ PV +T + PPC+TLF+ NLG+ ++
Sbjct: 194 SHAALAGSAAAIHATMPPPHLVASPALASPVGSTSSSAAAAAGTPPCSTLFVANLGQFVS 253
Query: 237 EEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRI 296
E+EL+ LF + PGF ++++ + V F+E++DV A+ + LQG V+ SS G+RI
Sbjct: 254 EQELKDLFGSFPGFCRLRMHNKGGAPVAFVEYQDVRLATHAMNALQGCVLFSSDRGGVRI 313
Query: 297 QY 298
++
Sbjct: 314 EF 315
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+F+ L V E+EL++L PG+ +++ KG P+ F + +LA A +ALQ
Sbjct: 242 TLFVANLGQFVSEQELKDLFGSFPGFCRLRMHNKGGAPVAFVEYQDVRLATHAMNALQGC 301
Query: 111 IFDAETKSVLHTEMAKKNL 129
+ + + + E AK +
Sbjct: 302 VLFSSDRGGVRIEFAKNKM 320
>gi|297834202|ref|XP_002884983.1| hypothetical protein ARALYDRAFT_478769 [Arabidopsis lyrata subsp.
lyrata]
gi|297330823|gb|EFH61242.1| hypothetical protein ARALYDRAFT_478769 [Arabidopsis lyrata subsp.
lyrata]
Length = 287
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 122/258 (47%), Gaps = 22/258 (8%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAKDA 106
+ T+F++GLP+DVK RE+ NL R G+E+ Q+ Y +G++ + FA F++ + A+AA +
Sbjct: 36 INTLFVSGLPNDVKAREIHNLFRRRYGFESCQLKYTGRGDQVVAFATFTSHRFAMAAMNE 95
Query: 107 LQEMIFDAETKSVLHTEMAKKNLFVKRG------IVADTNAYDQSKRLRTGGDYTHTGYS 160
L + FD +T S LH E+A+ N K +V D + SK + D + G S
Sbjct: 96 LNGVKFDPQTGSTLHIELARSNSRRKERPGSGPYVVIDNRNKELSK---SQDDQSDEGDS 152
Query: 161 APSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDN 220
P P A +P + AP +
Sbjct: 153 DPDEVQEPRNSESPKENDNAKSEADSEP-----------DSKAPSANGHLEKAYEGGSGA 201
Query: 221 PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHN 280
C+TLFI NLG + E+ELR L S GF +K+ + V F +FE++ A+ +
Sbjct: 202 RACSTLFIANLGPNCTEDELRQLLSRYSGFNILKIRARGGMPVAFADFEEIEQATDAMNE 261
Query: 281 LQGAVIPSSGSVGMRIQY 298
LQG ++ SS GM I+Y
Sbjct: 262 LQGNLLSSSDRGGMHIEY 279
>gi|186510039|ref|NP_001118622.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|26449895|dbj|BAC42069.1| unknown protein [Arabidopsis thaliana]
gi|332641880|gb|AEE75401.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 287
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 129/262 (49%), Gaps = 30/262 (11%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAKDA 106
+ T+F++GLP+DVK RE+ NL R G+E+ Q+ Y +G++ + FA F++ + A+AA +
Sbjct: 36 INTLFVSGLPNDVKAREIHNLFRRRHGFESCQLKYTGRGDQVVAFATFTSHRFALAAMNE 95
Query: 107 LQEMIFDAETKSVLHTEMAKKNLFVKRG------IVADTNAYDQSKRLRTGGDYTHTGYS 160
L + FD +T S LH E+A+ N K +V D + SK + D + G S
Sbjct: 96 LNGVKFDPQTGSNLHIELARSNSRRKERPGSGPYVVIDNRNKEISK---SQDDQSDEGDS 152
Query: 161 APSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDN 220
P P + P D + + APS+ ++ +
Sbjct: 153 DPDEVQEPGN---------SDSPKEND------TTKSEADSEPDSKAPSANGHLEKASEG 197
Query: 221 ----PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASS 276
C+TLFI NLG + E+EL+ L S PGF +K+ + V F +FE++ A+
Sbjct: 198 GSGARACSTLFIANLGPNCTEDELKQLLSRYPGFHILKIRARGGMPVAFADFEEIEQATD 257
Query: 277 VHHNLQGAVIPSSGSVGMRIQY 298
++LQG ++ SS GM I+Y
Sbjct: 258 AMNHLQGNLLSSSDRGGMHIEY 279
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+FI L + E EL+ LL PG+ ++ +G P+ FA F + A A + LQ
Sbjct: 206 TLFIANLGPNCTEDELKQLLSRYPGFHILKIRARGGMPVAFADFEEIEQATDAMNHLQGN 265
Query: 111 IFDAETKSVLHTEMAKKNL 129
+ + + +H E A+ +
Sbjct: 266 LLSSSDRGGMHIEYARSKM 284
>gi|291241724|ref|XP_002740760.1| PREDICTED: conserved hypothetical protein-like, partial
[Saccoglossus kowalevskii]
Length = 297
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 124/281 (44%), Gaps = 40/281 (14%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEK-----PMGFALFSTAQLAVAA 103
VRT+F++GLP D K REL L R GYE S + G++ P+GF F T A AA
Sbjct: 1 VRTLFVSGLPMDAKPRELYLLFRAYKGYEGSLLKVTGKQGKNTSPVGFVTFETRVGAEAA 60
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVAD----------------TNAYDQSKR 147
K ALQ + FD + L E AK N V + + YD
Sbjct: 61 KQALQGVRFDPDIPQTLRLEFAKSNTKVSKPKQSSPQPPNSHQALGPHLTPREPYDLGAA 120
Query: 148 LRTG----------GDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPV 197
G Y G + P + PA PH P P P
Sbjct: 121 FFPGAPEAWVHHPLAAYAELGPAMHHPAFSHPALHAQPH--------PAHPVIAPSHPHA 172
Query: 198 QMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLR 257
+P P P+PA + T N PC+TLF+ NLG EEELR LF PGF ++++
Sbjct: 173 PIPQP-PLPASIANAMAAVTGSNAPCSTLFVANLGTHTTEEELRELFGRIPGFSRLRLHN 231
Query: 258 QERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+ CF+EF++V AS + +QG V+ SS G+RI++
Sbjct: 232 KGGAPCCFVEFQNVVFASQALNQMQGQVMFSSDRGGLRIEF 272
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Query: 29 APPPPPPVPYDNTNRIA-----HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY 83
AP P PP+P N +A + T+F+ L E EL+ L +PG+ +++
Sbjct: 172 APIPQPPLPASIANAMAAVTGSNAPCSTLFVANLGTHTTEEELRELFGRIPGFSRLRLHN 231
Query: 84 KGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNL 129
KG P F F A A + +Q + + + L E AK +
Sbjct: 232 KGGAPCCFVEFQNVVFASQALNQMQGQVMFSSDRGGLRIEFAKNKM 277
>gi|224134967|ref|XP_002327534.1| predicted protein [Populus trichocarpa]
gi|222836088|gb|EEE74509.1| predicted protein [Populus trichocarpa]
Length = 281
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 132/300 (44%), Gaps = 37/300 (12%)
Query: 7 HTYHQQWPPAPAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKEREL 66
H +HQ + P PP AAAAP + + T+F++GLPDDVK RE+
Sbjct: 3 HGHHQPYDPYYQLPP----AAAAPGGE-----------WNSGINTLFVSGLPDDVKAREI 47
Query: 67 QNLLRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEM 124
N+ R PG+++ Q+ Y +G + + FA F Q A+AA +L + FD ++ S LH E+
Sbjct: 48 HNIFRRRPGFDSCQLKYTGRGNQVVAFATFFNHQSAIAALHSLNGVKFDPQSGSTLHIEL 107
Query: 125 AKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPP 184
A+ N + KR G Y P A P
Sbjct: 108 ARSN--------------SRRKRKPGSGAYVVIDKRTKKPSDAHETSSDDVESDPEEDPE 153
Query: 185 PYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNP------PCNTLFIGNLGESINEE 238
+ Y + A ++ V V + PC+TLFI NLG + E+
Sbjct: 154 MNNVDTAYQGDSENAKSEAASDPDNAAVAVNEIGERTAEGGVRPCSTLFIANLGPNCTED 213
Query: 239 ELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
EL+ + S PGF +K+ + V F +FE++ A+ V NLQ +PSS GM I+Y
Sbjct: 214 ELKQVLSQYPGFHVLKIRAKGGMPVAFADFEEIEQATKVMENLQETTLPSSDRGGMHIEY 273
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 25 AAAAAPPPPPPVPYDNT-NRIAHDEVR---TIFITGLPDDVKERELQNLLRWLPGYEASQ 80
+ AA+ P V + R A VR T+FI L + E EL+ +L PG+ +
Sbjct: 170 SEAASDPDNAAVAVNEIGERTAEGGVRPCSTLFIANLGPNCTEDELKQVLSQYPGFHVLK 229
Query: 81 VNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNL 129
+ KG P+ FA F + A + LQE + + +H E A+ +
Sbjct: 230 IRAKGGMPVAFADFEEIEQATKVMENLQETTLPSSDRGGMHIEYARSKM 278
>gi|219363207|ref|NP_001136951.1| uncharacterized protein LOC100217110 [Zea mays]
gi|194697740|gb|ACF82954.1| unknown [Zea mays]
Length = 303
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 139/307 (45%), Gaps = 25/307 (8%)
Query: 4 AGIHTYHQQWPPAPAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKE 63
+G+ H+ PPA A P AA P P V T+F+ GLPDDVK
Sbjct: 2 SGMSLSHR-LPPAAAAVDPYYVYAAHPDPQ------------RQGVLTLFVAGLPDDVKP 48
Query: 64 RELQNLLRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLH 121
RE+ NL P ++ + Y +G + + F F T + A++A +L IFD E+ LH
Sbjct: 49 REIHNLFSHRPAFDHCLLEYTGRGNQAVAFVTFFTHEAALSAMSSLNGTIFDPESGDRLH 108
Query: 122 TEMAKKNLFVKRGIVADTNAYDQ-SKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMA 180
E+AK RG V D+ + + D+ + G +
Sbjct: 109 IELAKSTSRRPRGGVEGYRVIDKRANKTEGNADHENVGDEDDDEVWGEDEDGGNDNNGDG 168
Query: 181 PPPPPY-----DPYGGYGVPPVQMPAPAPVP----APSSYVPVQNTKDNPPCNTLFIGNL 231
P +P +P Q P + S+ +++ D PPC+T+FI NL
Sbjct: 169 GSDEPSGTENENPSDKNELPTDQSDQPGHKQQNGQSLSNEGRDKSSSDIPPCSTIFIANL 228
Query: 232 GESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGS 291
G + E+EL+ + S +PGF +K+ R+ V F +F D+ S+++ + LQG V+ SS +
Sbjct: 229 GHTCTEDELKEVLSKEPGFHVLKMRRRGGMPVAFADFTDIESSTAAMNRLQGTVLASSDN 288
Query: 292 VGMRIQY 298
G+ I+Y
Sbjct: 289 DGLHIEY 295
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
TIFI L E EL+ +L PG+ ++ +G P+ FA F+ + + AA + LQ
Sbjct: 222 TIFIANLGHTCTEDELKEVLSKEPGFHVLKMRRRGGMPVAFADFTDIESSTAAMNRLQGT 281
Query: 111 IFDAETKSVLHTEMAKKNL 129
+ + LH E A+ +
Sbjct: 282 VLASSDNDGLHIEYARSKM 300
>gi|218197597|gb|EEC80024.1| hypothetical protein OsI_21699 [Oryza sativa Indica Group]
Length = 315
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 136/304 (44%), Gaps = 39/304 (12%)
Query: 30 PPPP-------PPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVN 82
PPPP P PY +T R V T+F+ GLPDDVK RE+ L PG++ +
Sbjct: 8 PPPPGDPYYVYAPHPYPDTQRQG---VLTLFVAGLPDDVKPREIHKLFSSRPGFDHCLLE 64
Query: 83 Y--KGEKPMGFALFSTAQLAVAAKDALQEMI---------------FDAETKSVLHTEMA 125
Y +G + + F F Q A++A AL +I FD +T LH E+A
Sbjct: 65 YTGRGNQVVAFVSFVNHQAALSAMSALNYVIPGVKYPDHREYSGTVFDPDTGDRLHIELA 124
Query: 126 KKNLFVKRGIVADTNAYDQS-KRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPP 184
K + + G D+ KR D+ + G + A G +
Sbjct: 125 KSSSRKRHGDGGVYRVVDKRLKRKERAADHENAG-DGGNDDDAWGEDDNGGNDGDGGSDE 183
Query: 185 PYDPYGGYGVPPVQMPAPAPVPAP----------SSYVPVQNTKDNPPCNTLFIGNLGES 234
P D ++PA P S P + + D PPC+TLF+ NLG S
Sbjct: 184 PLDTENDDSDEKNELPAERSSGQPGLKQHRGQSLSDDQPDKLSSDIPPCSTLFVANLGHS 243
Query: 235 INEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGM 294
EEEL+ + S QPGF +K+ R+ V F +F D+ S+++ LQG V+ SS + G+
Sbjct: 244 CTEEELKEVLSKQPGFHLLKMRRRGGMPVAFADFTDIESSTAAMDALQGTVLASSDADGL 303
Query: 295 RIQY 298
+I+Y
Sbjct: 304 QIEY 307
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+F+ L E EL+ +L PG+ ++ +G P+ FA F+ + + AA DALQ
Sbjct: 234 TLFVANLGHSCTEEELKEVLSKQPGFHLLKMRRRGGMPVAFADFTDIESSTAAMDALQGT 293
Query: 111 IFDAETKSVLHTEMAKKNL 129
+ + L E A+ +
Sbjct: 294 VLASSDADGLQIEYARSKM 312
>gi|195996479|ref|XP_002108108.1| hypothetical protein TRIADDRAFT_52243 [Trichoplax adhaerens]
gi|190588884|gb|EDV28906.1| hypothetical protein TRIADDRAFT_52243 [Trichoplax adhaerens]
Length = 298
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 134/277 (48%), Gaps = 37/277 (13%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEK--------PMGFALFSTAQLA 100
VRT+F++GLP DVK+R+L L R LPGY S + ++ P+ FA F T +LA
Sbjct: 15 VRTLFVSGLPVDVKQRDLHLLFRGLPGYLDSILKTSTKQPGHGNKSGPVAFATFETRELA 74
Query: 101 VAAKDALQEMIFDAE-TKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGY 159
AK LQ FD + T S L + AK N T +Y G + +T Y
Sbjct: 75 NEAKAILQGFQFDPDVTDSHLRVDFAKSN----------TKSYRSRHNSSNGQNVKNTIY 124
Query: 160 SAPSP----FHAPPAPVWGPHG----------YMAPPPPPYDPYGGYGVPPVQMPAPAPV 205
+ P P P++ H Y P Y + P ++P PA
Sbjct: 125 NGNIPNKLELANPAIPIYREHSISTIDLTPTYYQNIIPETYVNHIPIYPCPTEIPQPACH 184
Query: 206 PAPSSYVP-VQNTKDNPP--CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERH- 261
AP P +Q+ + P C+TLF+ NLG +I ++ELR +F GF+++++ ++
Sbjct: 185 SAPPVLQPHMQSFQQQLPQVCSTLFVANLGRNITDKELRDIFGRCVGFRRLRMHKKPGFP 244
Query: 262 TVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
T FIEF ++ A+ + LQGA+I SS G+RI+Y
Sbjct: 245 TTAFIEFANIQFATQALNALQGAIIQSSECGGIRIEY 281
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 1/123 (0%)
Query: 8 TYHQQWPPAPAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQ 67
TY P P P P A + PP + + T+F+ L ++ ++EL+
Sbjct: 164 TYVNHIPIYPCPTEIPQPACHSAPPVLQPHMQSFQQQLPQVCSTLFVANLGRNITDKELR 223
Query: 68 NLLRWLPGYEASQVNYK-GEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAK 126
++ G+ +++ K G F F+ Q A A +ALQ I + + E A+
Sbjct: 224 DIFGRCVGFRRLRMHKKPGFPTTAFIEFANIQFATQALNALQGAIIQSSECGGIRIEYAR 283
Query: 127 KNL 129
K +
Sbjct: 284 KKM 286
>gi|222634965|gb|EEE65097.1| hypothetical protein OsJ_20145 [Oryza sativa Japonica Group]
Length = 315
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 136/304 (44%), Gaps = 40/304 (13%)
Query: 31 PPPP--------PVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVN 82
PPPP P PY + R V T+F+ GLPDDVK RE+ NL PG++ +
Sbjct: 8 PPPPGDPYYVYAPHPYPDPQRQG---VLTLFVAGLPDDVKPREIHNLFSSRPGFDHCLLE 64
Query: 83 Y--KGEKPMGFALFSTAQLAVAAKDALQEMI---------------FDAETKSVLHTEMA 125
Y +G + + F F Q A++A AL +I FD +T LH E+A
Sbjct: 65 YTGRGNQVVAFVSFVNHQAALSAMSALNYVIPGVKYPDHREYSGTVFDPDTGDRLHIELA 124
Query: 126 KKNLFVKRGIVADTNAYDQS-KRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPP 184
K + + G D+ KR D+ + G + A G +
Sbjct: 125 KSSSRKRHGDGGVYRVVDKRLKRKERAADHENAG-DGGNDDDAWGEDDNGGNDGDGGSDE 183
Query: 185 PYDPYGGYGVPPVQMPAPAPVPAP----------SSYVPVQNTKDNPPCNTLFIGNLGES 234
P D ++PA P S P + + D PPC+TLF+ NLG S
Sbjct: 184 PLDTENDDSDEKNELPAERSSGQPGLKQHRGQSLSDDQPDKLSSDIPPCSTLFVANLGHS 243
Query: 235 INEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGM 294
EEEL+ + S QPGF +K+ R+ V F +F D+ S+++ LQG V+ SS + G+
Sbjct: 244 CTEEELKEVLSKQPGFHLLKMRRRGGMPVAFADFTDIESSTAAMDALQGTVLASSDADGL 303
Query: 295 RIQY 298
+I+Y
Sbjct: 304 QIEY 307
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+F+ L E EL+ +L PG+ ++ +G P+ FA F+ + + AA DALQ
Sbjct: 234 TLFVANLGHSCTEEELKEVLSKQPGFHLLKMRRRGGMPVAFADFTDIESSTAAMDALQGT 293
Query: 111 IFDAETKSVLHTEMAKKNL 129
+ + L E A+ +
Sbjct: 294 VLASSDADGLQIEYARSKM 312
>gi|380018457|ref|XP_003693144.1| PREDICTED: protein couch potato-like [Apis florea]
Length = 331
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 137/299 (45%), Gaps = 47/299 (15%)
Query: 39 DNTNRIA--HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGF 91
D+ N +A DEVRT+F++GLP D K REL L R GYE S + N K P+GF
Sbjct: 10 DSVNTVATGEDEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGF 69
Query: 92 ALFSTAQLAVAAKDALQEMI-FDAETKSVLHTEMAKKNLFV---KRGIVADTNAYDQSKR 147
F T A AAK LQ+ + FD + + E AK N V K+ A ++
Sbjct: 70 VTFHTRAGAEAAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSKPKQPAAAAATSHPALMH 129
Query: 148 LRTGGDYTHTGYSAPSPFHAPPAPVW-GPHGYMAPPPPPYDPYGGYGVPPV---QMPAPA 203
TG H G SPF +W P Y P V P Q+PAP
Sbjct: 130 PLTG----HLG----SPFFPGGPELWHHPLAYSTAGELPGTLQHATLVHPALHPQVPAPM 181
Query: 204 PVPAPSSYVPVQNTK------------------------DNPPCNTLFIGNLGESINEEE 239
+P P++ + + N PC+TLF+ NLG+ ++E E
Sbjct: 182 SLPHPTTLTSIHASLPHFLPSPALASPVGSPSSQPNIAVSNAPCSTLFVANLGQFVSEHE 241
Query: 240 LRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
L+ +FS+ PGF ++++ + V F+E++DV A+ LQG+ + SS +RI+Y
Sbjct: 242 LKDIFSSFPGFSRLRMHTKGGSPVAFVEYQDVRYAAQAMATLQGSFLLSSDRGAIRIEY 300
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+F+ L V E EL+++ PG+ +++ KG P+ F + + A A LQ
Sbjct: 227 TLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTKGGSPVAFVEYQDVRYAAQAMATLQGS 286
Query: 111 IFDAETKSVLHTEMAKKNL 129
+ + + E AK +
Sbjct: 287 FLLSSDRGAIRIEYAKSKM 305
>gi|328789046|ref|XP_392443.4| PREDICTED: protein couch potato-like [Apis mellifera]
gi|350408751|ref|XP_003488500.1| PREDICTED: protein couch potato-like [Bombus impatiens]
Length = 326
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 137/299 (45%), Gaps = 47/299 (15%)
Query: 39 DNTNRIA--HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGF 91
D+ N +A DEVRT+F++GLP D K REL L R GYE S + N K P+GF
Sbjct: 10 DSVNTVATGEDEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGF 69
Query: 92 ALFSTAQLAVAAKDALQEMI-FDAETKSVLHTEMAKKNLFV---KRGIVADTNAYDQSKR 147
F T A AAK LQ+ + FD + + E AK N V K+ A ++
Sbjct: 70 VTFHTRAGAEAAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSKPKQPAAAAATSHPALMH 129
Query: 148 LRTGGDYTHTGYSAPSPFHAPPAPVW-GPHGYMAPPPPPYDPYGGYGVPPV---QMPAPA 203
TG H G SPF +W P Y P V P Q+PAP
Sbjct: 130 PLTG----HLG----SPFFPGGPELWHHPLAYSTAGELPGTLQHATLVHPALHPQVPAPM 181
Query: 204 PVPAPSSYVPVQNTK------------------------DNPPCNTLFIGNLGESINEEE 239
+P P++ + + N PC+TLF+ NLG+ ++E E
Sbjct: 182 SLPHPTTLTSIHASLPHFLPSPALASPVGSPSSQPNIAVSNAPCSTLFVANLGQFVSEHE 241
Query: 240 LRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
L+ +FS+ PGF ++++ + V F+E++DV A+ LQG+ + SS +RI+Y
Sbjct: 242 LKDIFSSFPGFSRLRMHTKGGSPVAFVEYQDVRYAAQAMATLQGSFLLSSDRGAIRIEY 300
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+F+ L V E EL+++ PG+ +++ KG P+ F + + A A LQ
Sbjct: 227 TLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTKGGSPVAFVEYQDVRYAAQAMATLQGS 286
Query: 111 IFDAETKSVLHTEMAKKNLFVKRGIVADTNAY-DQSKRLRTG 151
+ + + E AK K V TN + + SKR G
Sbjct: 287 FLLSSDRGAIRIEYAKS----KMAEVGFTNLWIEGSKREENG 324
>gi|147802946|emb|CAN64038.1| hypothetical protein VITISV_021557 [Vitis vinifera]
Length = 335
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 114/226 (50%), Gaps = 12/226 (5%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVN--YKGEKPMGFALFSTAQLAVAAK 104
DEVRT+FI GLP+DVK RE+ NL R PGYE+S + + +P FA+F Q A+A
Sbjct: 75 DEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPSQNSQPFAFAVFLDQQSAIATM 134
Query: 105 DALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSP 164
AL M+FD E S L+ ++AK N KR AD K+++ ++ S
Sbjct: 135 HALNGMVFDLEKGSTLYIDLAKSNSRSKRS-RADDERPGLDKKVKGSAGFSRPPDSGVGS 193
Query: 165 FHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSS-YVPVQNTKDNPPC 223
H P G Y P +G + + PA + S+ Y P QN PC
Sbjct: 194 VHMPG---MGNSAYSMIGYPSTQSHGNFDGRALN-ETPAKLNNSSAPYFP-QNVT---PC 245
Query: 224 NTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
TLF+ NLG + +E+EL +FS PGF ++K+ V F++F+
Sbjct: 246 PTLFVANLGPTCSEQELIDIFSRCPGFLKLKMQSTYGTPVAFVDFQ 291
>gi|222636114|gb|EEE66246.1| hypothetical protein OsJ_22424 [Oryza sativa Japonica Group]
Length = 283
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 114/233 (48%), Gaps = 18/233 (7%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGE--KPMGFALFSTAQLAVAA 103
DE+RT+FI GLP D K RE+ NL R PGY +S + G+ + FA+F+ A+AA
Sbjct: 65 RDELRTLFIAGLPGDAKAREVYNLFRDFPGYVSSHLRTSGKSSQAYAFAVFADQPSALAA 124
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPS 163
A IFD E LH ++AK N KR D +Y K+ R + +G +
Sbjct: 125 MSATNGRIFDLENNCTLHVDLAKSNSRSKRSRTDDVPSYSSEKKARNPRGFPDSGAGSNI 184
Query: 164 PFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPC 223
+GY P Y + PA A PS++ P ++NPPC
Sbjct: 185 HMSGMGNSSHSLNGY-----PSAQSYTNF------EPA-AFSKDPSAFAP----QNNPPC 228
Query: 224 NTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASS 276
TLF+ NLG + +E+EL +FS+ GF ++K+ + V F++F+ V A S
Sbjct: 229 PTLFVANLGPTCSEQELIDVFSSCAGFIKVKMQNKFGAPVAFVDFKGVFGAYS 281
>gi|452825214|gb|EME32212.1| RNA-binding protein, putative [Galdieria sulphuraria]
Length = 333
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 132/269 (49%), Gaps = 25/269 (9%)
Query: 41 TNRIAHDEVRTIFITGLPDDVKERELQNLLRW-LPGYEASQV--NYKGEKPMGFALFSTA 97
T + + D VRT+FITG P DV ERE+ NL R+ P Y+ + + + ++P+ FA+F T
Sbjct: 18 TKQESEDTVRTLFITGFPADVLEREVHNLFRFRYPLYDGCIIKNSSRRKEPVVFAVFRTR 77
Query: 98 QLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKR---LRTGGDY 154
+ A A ++FD S L E AK N VKR A +++++ ++R R Y
Sbjct: 78 EEAEEAMKDFDGIVFDPALGSKLKIEFAKSNTRVKRDW-AHSSSFEDNRRNEGRRVEKRY 136
Query: 155 THTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDP----YGGYGVPPVQMPAPAPVPAPSS 210
+ YS + G G +A P P P +Q P + V P +
Sbjct: 137 RGSDYSLGT----------GTGGVVAQLPLFTQPGSWNLASNNTPGLQYPMFSNVSLPLT 186
Query: 211 YVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKV-LRQERHTVCFIEFE 269
P N C+TLF+GNL S+ + EL LFS GF+++++ ++ ER V F+EF
Sbjct: 187 SNPSFNQN---ACSTLFVGNLSPSVTQAELENLFSRCTGFRRVRLNIKDERAPVAFVEFT 243
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
D ++ Q +PSS G+RI++
Sbjct: 244 DSVYSTQAMQQCQNVPLPSSEKGGIRIEF 272
>gi|242094708|ref|XP_002437844.1| hypothetical protein SORBIDRAFT_10g003600 [Sorghum bicolor]
gi|241916067|gb|EER89211.1| hypothetical protein SORBIDRAFT_10g003600 [Sorghum bicolor]
Length = 826
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 131/305 (42%), Gaps = 38/305 (12%)
Query: 22 PPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV 81
P AAAAA P P+ + R V T+F+ GLPDDVK RE+ NL P ++ +
Sbjct: 8 PHAAAAAVDPYYVYAPHPDPQRQG---VLTLFVAGLPDDVKPREIHNLFSHRPAFDHCLL 64
Query: 82 NYKGE--KPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
Y G + + F F T + A++A +L IFD ET LH E+AK RG
Sbjct: 65 EYTGRANQVVAFVTFFTHEAALSAMTSLNGTIFDPETGYRLHIELAKSTSRRPRGGGEVY 124
Query: 140 NAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDPYGG------YG 193
D+ G + G VWG D G G
Sbjct: 125 RVIDKRTNKTEGNADENVGDEVDEE-------VWG-----GDEDGANDDNGDGESDEPSG 172
Query: 194 VPPVQMPAPAPVPAPSSYVPV---QNTK------------DNPPCNTLFIGNLGESINEE 238
+PA S P QN K D PPC+TLFI NLG++ ++
Sbjct: 173 TENENSSDKNELPADQSDQPRHKKQNGKSLSNDGRDKSSNDIPPCSTLFIANLGDTCTKD 232
Query: 239 ELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
EL + S +PGF +K+ R+ V F +F D+ S+++ ++LQG V+ SS S G+ I+
Sbjct: 233 ELNEVLSKEPGFDVLKMRRRGGMPVAFADFTDIESSTAAMNSLQGTVLASSDSDGLHIES 292
Query: 299 PFCCF 303
Sbjct: 293 ELSTL 297
>gi|218198782|gb|EEC81209.1| hypothetical protein OsI_24241 [Oryza sativa Indica Group]
Length = 283
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 114/235 (48%), Gaps = 22/235 (9%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGE--KPMGFALFSTAQLAVAA 103
DE+RT+FI GLP D K RE+ NL R PGY +S + G+ + FA+F+ A+AA
Sbjct: 65 RDELRTLFIAGLPGDAKAREVYNLFRDFPGYVSSHLRTSGKSSQAYAFAVFADQPSALAA 124
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPS 163
A IFD E LH ++AK N KR D +Y K+ R + +G +
Sbjct: 125 MSATNGRIFDLENNCTLHVDLAKSNSRSKRSRTDDVPSYSSEKKARNPRGFPDSGAGSNI 184
Query: 164 PFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPC 223
+GY P Y + PA A PS++ P ++NPPC
Sbjct: 185 HMSGMGNSSHSLNGY-----PSAQSYTNF------EPA-AFSKDPSAFAP----QNNPPC 228
Query: 224 NTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT--VCFIEFEDVNSASS 276
TLF+ NLG + +E+EL +FS+ GF +KV Q + V F++F+ V A S
Sbjct: 229 PTLFVANLGPTCSEQELIDVFSSCAGF--IKVKMQNKFGAPVAFVDFKGVFGAYS 281
>gi|345485970|ref|XP_001605039.2| PREDICTED: protein couch potato-like [Nasonia vitripennis]
Length = 327
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 139/291 (47%), Gaps = 34/291 (11%)
Query: 40 NTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFALF 94
NT + DEVRT+F++GLP D K REL L R GYE S + N K P+GF F
Sbjct: 13 NTVATSEDEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTNKNGKTASPVGFVTF 72
Query: 95 STAQLAVAAKDALQEMI-FDAETKSVLHTEMAKKNLFV---KRGIVADTNAYDQSKRLRT 150
T A AAK LQ+ + FD + + E AK N V K+ A ++ T
Sbjct: 73 HTRSEAEAAKHDLQQGVRFDPDMPQTIRLEFAKSNTKVSKPKQPAAAAATSHPALMHPLT 132
Query: 151 GGDYTHTGYSAPSPFHAPPA-----PVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPV 205
G + P +H P A + G + A P P VP + +P P +
Sbjct: 133 GPLGSPFFPGGPELWHHPLAYSTAGELPGTLQHAALVHPALHPQ--VPVPSMSLPHPTTL 190
Query: 206 -----------PAPSSYVPVQNTKDNP-------PCNTLFIGNLGESINEEELRGLFSAQ 247
P+P+ PV ++ P PC+TLF+ NLG+ ++E EL+ +F++
Sbjct: 191 TSLHASLPHFLPSPALASPVGSSSSQPSIAVSNAPCSTLFVANLGQFVSEHELKEIFNSF 250
Query: 248 PGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
PGF ++++ + V F+E++DV A+ LQG+++ SS +RI+Y
Sbjct: 251 PGFCRLRMHTKGGSPVAFVEYQDVRYAAQAMATLQGSLLVSSDRGAIRIEY 301
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+F+ L V E EL+ + PG+ +++ KG P+ F + + A A LQ
Sbjct: 228 TLFVANLGQFVSEHELKEIFNSFPGFCRLRMHTKGGSPVAFVEYQDVRYAAQAMATLQGS 287
Query: 111 IFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGD 153
+ + + + E AK K V TN + + + G
Sbjct: 288 LLVSSDRGAIRIEYAKS----KMAEVGFTNLWMEGSKGEENGQ 326
>gi|339251724|ref|XP_003372884.1| protein couch potato [Trichinella spiralis]
gi|316968731|gb|EFV52966.1| protein couch potato [Trichinella spiralis]
Length = 355
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 133/285 (46%), Gaps = 43/285 (15%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEAS-----QVNYKGEKPMGFALFSTAQLAVA 102
VRT+F++GLP D K REL L R GYE+S Q N K P+GF F++ A
Sbjct: 64 RVRTLFVSGLPIDAKPRELYLLFRAYKGYESSLLKVTQKNGKATTPIGFVTFNSRAAAEE 123
Query: 103 AKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTH--TGYS 160
AK +LQ + FD E + E A+ N V + V QS + H TG+
Sbjct: 124 AKQSLQGVKFDPELPQPIRLEFARSNTKVCKPKV-------QSPPASAYAPFLHPITGHE 176
Query: 161 APSP-FHAPPAPVWGP--------------HGYM-------APPPPPYDPYGGYGVPPVQ 198
+P H P A ++ P H + A PP P+ Y P
Sbjct: 177 LMAPILHGPGADLFHPALASYAAEFAQTFPHPLLQNTLQHPALPPIPHQLASHY--PAAM 234
Query: 199 MPAPAPVPA---PSSYVP--VQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQM 253
+ A + +P P+S P V + P TLF+ NLG E+EL +FS PGF ++
Sbjct: 235 LAAASGMPGMLPPASLPPTSVSSMSAGQPSTTLFVANLGAKTQEQELLEVFSNIPGFIRL 294
Query: 254 KVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
++L + V F+E+ DV +A+ + LQG V+ SS GMRI++
Sbjct: 295 RILHKNGFPVAFVEYSDVINANHALNALQGFVLMSSDRGGMRIEF 339
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 24 AAAAAAPPPPPPV---PYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQ 80
AAA+ P PP P ++ A T+F+ L +E+EL + +PG+ +
Sbjct: 236 AAASGMPGMLPPASLPPTSVSSMSAGQPSTTLFVANLGAKTQEQELLEVFSNIPGFIRLR 295
Query: 81 VNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKN 128
+ +K P+ F +S A A +ALQ + + + + E A+
Sbjct: 296 ILHKNGFPVAFVEYSDVINANHALNALQGFVLMSSDRGGMRIEFARSK 343
>gi|383858263|ref|XP_003704621.1| PREDICTED: protein couch potato-like [Megachile rotundata]
Length = 334
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 130/289 (44%), Gaps = 45/289 (15%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFALFSTAQLAV 101
VRT+F++GLP D K REL L R GYE S + N K P+GF F T A
Sbjct: 13 KSVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 72
Query: 102 AAKDALQEMI-FDAETKSVLHTEMAKKNLFV---KRGIVADTNAYDQSKRLRTGGDYTHT 157
AAK LQ+ + FD + + E AK N V K+ A ++ TG H
Sbjct: 73 AAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSKPKQPAAAAATSHPALMHPLTG----HL 128
Query: 158 GYSAPSPFHAPPAPVW-GPHGYMAPPPPPYDPYGGYGVPPV---QMPAPAPVPAPSSYVP 213
G SPF +W P Y P V P Q+PAP +P P++
Sbjct: 129 G----SPFFPGGPELWHHPLAYSTAGELPGTLQHATLVHPALHPQVPAPMSLPHPTTLTS 184
Query: 214 VQNTK------------------------DNPPCNTLFIGNLGESINEEELRGLFSAQPG 249
+ + N PC+TLF+ NLG+ ++E EL+ +FS+ PG
Sbjct: 185 IHASLPHFLPSPALASPVGSPSSQPNIAVSNAPCSTLFVANLGQFVSEHELKDIFSSFPG 244
Query: 250 FKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
F ++++ + V F+E++DV A+ LQG+ + SS +RI+Y
Sbjct: 245 FSRLRMHTKGGSPVAFVEYQDVRYAAQAMATLQGSFLLSSDRGAIRIEY 293
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+F+ L V E EL+++ PG+ +++ KG P+ F + + A A LQ
Sbjct: 220 TLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTKGGSPVAFVEYQDVRYAAQAMATLQGS 279
Query: 111 IFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLR 149
+ + + E AK K V TN + + +R R
Sbjct: 280 FLLSSDRGAIRIEYAKS----KMAEVGFTNLWIEWRRYR 314
>gi|308494202|ref|XP_003109290.1| CRE-MEC-8 protein [Caenorhabditis remanei]
gi|308246703|gb|EFO90655.1| CRE-MEC-8 protein [Caenorhabditis remanei]
Length = 305
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 133/298 (44%), Gaps = 25/298 (8%)
Query: 20 PPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEAS 79
P P A+A + V + TN +VRT+F++GLP D K REL L R GYE +
Sbjct: 4 PKPNLASAVSMESLNSVSSEVTN---PSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGA 60
Query: 80 QV-----NYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRG 134
+ N K P+GF F T Q A A+ LQ + FD E VL E+AK N V R
Sbjct: 61 LLKMTSKNGKPTSPVGFVTFLTQQDAQDARKMLQGVRFDPECAQVLRLELAKSNTKVAR- 119
Query: 135 IVADTNAYDQSKRLRTGGDYTHTGYSAPSP--FHAPPAPVWGPHGYMAPPPP----PYDP 188
+ Q L G PS A A + H +A P
Sbjct: 120 --PKQSPPPQQSALSAAGVPQFLAPMQPSDLLLDAQSAALLNEHQLLALSLPHLHAAQAL 177
Query: 189 YGGYGVPPVQ---MPAPAPVPAP-----SSYVPVQNTKDNPPCNTLFIGNLGESINEEEL 240
Y P +Q P A P +S Q+ C+TLF+ NL +NE++L
Sbjct: 178 QAAYMQPSLQQFNQPLYATQLHPAAAAAASLHSQQSQASTSACSTLFVANLSAEVNEDQL 237
Query: 241 RGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
RG+F A GF ++++ + V F+E+ D++ A+ +LQG + ++ G+RI+Y
Sbjct: 238 RGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLHKATQAMMSLQGFQVSANDRGGLRIEY 295
>gi|326506974|dbj|BAJ95564.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 259
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 112/256 (43%), Gaps = 49/256 (19%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAKDA 106
V T+F+ GLPDDVK RE+ NL PG++ + Y +G + + F F T A++A +
Sbjct: 39 VVTLFVAGLPDDVKPREIHNLFSRRPGFDHCLLEYTGRGNQAVAFVSFFTHHAALSAMAS 98
Query: 107 LQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFH 166
L +FD + LH E+AK N R R GG G
Sbjct: 99 LNGSVFDPDNGDCLHIELAKSN-----------------SRKRHGGQGGSDG-------- 133
Query: 167 APPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNP----P 222
P D ++ + +++ D P P
Sbjct: 134 ------------------PSDEENDNSSDKNELLTDQSGEPGTKQQKGRSSNDQPDKIPP 175
Query: 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQ 282
C+TLF+ NLG++ E+EL L S QPGF +K+ R+ F +F D+ S+++ N +
Sbjct: 176 CSTLFLSNLGQTCTEKELEELLSKQPGFHVLKMRRRGGLPAAFADFTDIESSTAAMENFK 235
Query: 283 GAVIPSSGSVGMRIQY 298
G ++ SS S G++I+Y
Sbjct: 236 GTMLSSSDSDGLQIEY 251
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 38/79 (48%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+F++ L E+EL+ LL PG+ ++ +G P FA F+ + + AA + +
Sbjct: 178 TLFLSNLGQTCTEKELEELLSKQPGFHVLKMRRRGGLPAAFADFTDIESSTAAMENFKGT 237
Query: 111 IFDAETKSVLHTEMAKKNL 129
+ + L E A+ +
Sbjct: 238 MLSSSDSDGLQIEYARSKM 256
>gi|321469536|gb|EFX80516.1| hypothetical protein DAPPUDRAFT_23478 [Daphnia pulex]
Length = 270
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 126/266 (47%), Gaps = 21/266 (7%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFALFSTAQLAVA 102
+VRT+F++GLP D K REL L R GYE SQ+ N K P+GF F+T A
Sbjct: 1 QVRTLFVSGLPMDAKPRELYLLFRAYDGYENSQLKVTSKNGKTTSPVGFVTFATRASAEG 60
Query: 103 AKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTN---AYDQSKRLR--TGGDY--- 154
AK LQ + FD + + E AK N V + +++ A L TG +Y
Sbjct: 61 AKQDLQGVRFDPDIPQTIRLEFAKSNTKVSKPKQQNSSPPAAAPHPTLLHPLTGREYHDD 120
Query: 155 --THTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYV 212
TH G+ + P H MA GG V A A P+
Sbjct: 121 FFTHGGHHLTQLMGSTPHHHHHHHHQMAQAAAAAAAAGGSPVAAPGAGAGASTPS----- 175
Query: 213 PVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVN 272
N PC+TLF+ NLG+ ++E+EL+ LF + PG+ ++++ + V F+E+ DV
Sbjct: 176 -AMGGGANAPCSTLFVANLGQFVSEQELKELFGSFPGYCRLRMHNKGGAPVAFVEYADVR 234
Query: 273 SASSVHHNLQGAVIPSSGSVGMRIQY 298
A+ +LQG + SS G+RI+Y
Sbjct: 235 CAAQALISLQGTYLLSSDRGGVRIEY 260
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+F+ L V E+EL+ L PGY +++ KG P+ F ++ + A A +LQ
Sbjct: 187 TLFVANLGQFVSEQELKELFGSFPGYCRLRMHNKGGAPVAFVEYADVRCAAQALISLQGT 246
Query: 111 IFDAETKSVLHTEMAKKNL 129
+ + + E A+ +
Sbjct: 247 YLLSSDRGGVRIEYARNKM 265
>gi|15231331|ref|NP_187983.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332641879|gb|AEE75400.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 296
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 125/279 (44%), Gaps = 48/279 (17%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKP-------------------- 88
+ T+F++GLP+DVK RE+ NL R G+E+ Q+ Y G
Sbjct: 36 INTLFVSGLPNDVKAREIHNLFRRRHGFESCQLKYTGRGDQVCKNLQFLFFFIPIFRKAV 95
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRG------IVADTNAY 142
+ FA F++ + A+AA + L + FD +T S LH E+A+ N K +V D
Sbjct: 96 VAFATFTSHRFALAAMNELNGVKFDPQTGSNLHIELARSNSRRKERPGSGPYVVIDNRNK 155
Query: 143 DQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAP 202
+ SK + D + G S P P + P D + +
Sbjct: 156 EISK---SQDDQSDEGDSDPDEVQEPGN---------SDSPKEND------TTKSEADSE 197
Query: 203 APVPAPSSYVPVQNTKDN----PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQ 258
APS+ ++ + C+TLFI NLG + E+EL+ L S PGF +K+ +
Sbjct: 198 PDSKAPSANGHLEKASEGGSGARACSTLFIANLGPNCTEDELKQLLSRYPGFHILKIRAR 257
Query: 259 ERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQ 297
V F +FE++ A+ ++LQG ++ SS GM I+
Sbjct: 258 GGMPVAFADFEEIEQATDAMNHLQGNLLSSSDRGGMHIE 296
>gi|440804858|gb|ELR25722.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 287
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 126/260 (48%), Gaps = 21/260 (8%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQ 108
+RT++++G P DVK RE+ NL R GYE S + G + F F++ + AVAAK +
Sbjct: 22 MRTLWLSGFPLDVKHREIHNLFRPYRGYEDSILKPNG---VAFVTFTSHEAAVAAKSDIT 78
Query: 109 EMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAY-------DQSKRLRTGGDYTHTGYSA 161
+ FD + VL E AK+N KR A+ +A ++KR++ G
Sbjct: 79 GLHFDPDGTDVLKVEFAKQN--SKRRREAEESASPEFWSKEREAKRIKRALAGGGGGGGG 136
Query: 162 PSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPA---PAPVPAPSSYVPVQNTK 218
P+ G GY PP Y VP + P PA S V
Sbjct: 137 PTSIDVNAMYRAGLAGYPFNPPSMYGLSSMGPVPDAYLLGGQDRLPKPAGKSLVRF---- 192
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
PP +TLFI NLG + +E+E+ +F A GF + ++ + + F++++D S++
Sbjct: 193 --PPGSTLFISNLGTASSEQEISEVFGAFQGFVRAQLYNRGHNINAFVQYKDYESSTQAL 250
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
++LQG+V+ SS M+I+Y
Sbjct: 251 NHLQGSVLMSSDKGPMKIEY 270
>gi|384486783|gb|EIE78963.1| hypothetical protein RO3G_03668 [Rhizopus delemar RA 99-880]
Length = 236
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 110/251 (43%), Gaps = 55/251 (21%)
Query: 61 VKERELQNLLRWLPGYEAS------------QVNYKGEKPM-GFALFSTAQLAVAAKDAL 107
+ ERE QN+ + G+EA+ +N G+K M GFA F T A+ + + L
Sbjct: 1 MSEREFQNMFTFCRGFEAASLKWHCKDQEDDMLNNGGKKQMIGFARFKTRLEALESIEVL 60
Query: 108 QEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHA 167
D E +VL EMAKKNL +KR N+ D
Sbjct: 61 SGKKIDQEKGTVLKAEMAKKNLHIKRATTG--NSVDM----------------------- 95
Query: 168 PPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLF 227
P YD + P + + + S + NPPCNTL+
Sbjct: 96 --------------KPSIYDHFSPL---PSDLFHDSDMLMDDSLFRKRPVDQNPPCNTLY 138
Query: 228 IGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIP 287
+GNL + +EEEL LFS + G+++M + + +CF+EFED+ SAS + LQG +
Sbjct: 139 VGNLPLNTSEEELSDLFSNREGYRRMCFRTKSQGPMCFVEFEDIPSASHTLNELQGHALT 198
Query: 288 SSGSVGMRIQY 298
+S G+R+ Y
Sbjct: 199 NSVKGGIRLSY 209
>gi|168036913|ref|XP_001770950.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677814|gb|EDQ64280.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 212
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 101/217 (46%), Gaps = 41/217 (18%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGE--KPMGFALFSTAQLAV 101
+A +EV+T+F++GLPDD+KERE+ NL R GYE+ Q+ + G + + FA+F+ A+
Sbjct: 10 MAEEEVKTLFLSGLPDDIKEREIYNLFRNFEGYESCQLKFSGRGFQIVAFAVFTDQATAL 69
Query: 102 AAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSA 161
AK+ L + FD +T +VLH E+A+ N KR T T +T TG A
Sbjct: 70 KAKEELNGLKFDPQTGAVLHIELARANSRTKRSRSVKTLT---ESFCGTVFGFTLTGVGA 126
Query: 162 PSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNP 221
H P G H P + P P PS + ++ +
Sbjct: 127 --TLHMP-----GLH------------------PSIFNDMPGFPPPPSDFTNLRRFQGMV 161
Query: 222 P-----------CNTLFIGNLGESINEEELRGLFSAQ 247
P C+TLFI NLG S EEEL L S Q
Sbjct: 162 PLPPPAPGSNPPCSTLFIANLGPSCTEEELSQLLSRQ 198
>gi|28207152|gb|AAO37216.1| hypothetical protein [Arabidopsis thaliana]
Length = 204
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 83/174 (47%), Gaps = 22/174 (12%)
Query: 45 AHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-NYKGEKPMGFALFSTAQLAVAA 103
A DEVRT+F+ GLP+DVK RE+ NL R PGYE S + + G KP FA+FS Q AVA
Sbjct: 30 ARDEVRTLFVAGLPEDVKPREIXNLFREFPGYETSHLRSSDGAKPFAFAVFSDLQSAVAV 89
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPS 163
AL M+FD E S LH ++AK N KR D ++ K+ ++ T +G+
Sbjct: 90 MHALNGMVFDLEKHSTLHIDLAKSNPKSKRSRTDD--GWESLKKPKSWNTTTESGF---- 143
Query: 164 PFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVP--APSSYVPVQ 215
G P Y G P Q A V AP+S PV
Sbjct: 144 -------------GSFQTPGMSSSAYNTIGYSPAQSQGIANVAGRAPTSRKPVS 184
>gi|270002453|gb|EEZ98900.1| hypothetical protein TcasGA2_TC004515 [Tribolium castaneum]
Length = 296
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 124/270 (45%), Gaps = 31/270 (11%)
Query: 60 DVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFALFSTAQLAVAAKDALQEMI-FD 113
D K REL L R GYE S + N K P+GF F+T A AAK LQ+ + FD
Sbjct: 2 DAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFNTRAGAEAAKQDLQQGVRFD 61
Query: 114 AETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLR---TGGDYTHTGYSAPSPFHAPPA 170
+ + E AK N V + NA + L TG T P +H P A
Sbjct: 62 PDMPQTIRLEFAKSNTKVSKPKQQAANAANTHPTLMHPLTGHLGTPFFPGGPELWHHPLA 121
Query: 171 PVWGP--------HGYMAPP------PPPYD---PYGGYGVPPVQMPAPAPVPAPSSYVP 213
H + P PPP P V +P P PA +S V
Sbjct: 122 YSAAAELPGAALQHATLVHPALHPQVPPPMSLPHPTALTSVHAASLPHFLPSPALASPVG 181
Query: 214 VQNTK-----DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEF 268
+++ NPPC+TLF+ NLG+ ++E EL+ +F++ PGF ++++ + V F+E+
Sbjct: 182 SSSSQPGLGVSNPPCSTLFVANLGQFVSEHELKEIFASFPGFCRLRMHNKGGSPVAFMEY 241
Query: 269 EDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+DV A+ V LQG+ + SS +RI+Y
Sbjct: 242 QDVRCAAQVMAALQGSFLLSSDRGPIRIEY 271
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 40/87 (45%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+F+ L V E EL+ + PG+ +++ KG P+ F + + A ALQ
Sbjct: 198 TLFVANLGQFVSEHELKEIFASFPGFCRLRMHNKGGSPVAFMEYQDVRCAAQVMAALQGS 257
Query: 111 IFDAETKSVLHTEMAKKNLFVKRGIVA 137
+ + + E AK + + G++A
Sbjct: 258 FLLSSDRGPIRIEYAKSKMAAEVGLLA 284
>gi|357611617|gb|EHJ67566.1| putative Protein couch potato [Danaus plexippus]
Length = 324
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 134/294 (45%), Gaps = 42/294 (14%)
Query: 42 NRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFALFST 96
+IA +VRT+F++GLP D K REL L R GYE S + N K P+GF F T
Sbjct: 9 RKIADIKVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHT 68
Query: 97 AQLAVAAKDALQEMI-FDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYT 155
A AAK LQ+ + FD + + E AK N V + A A + +
Sbjct: 69 RAGAEAAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSKPKPAVATAAPAAHPALM---HP 125
Query: 156 HTGYSAPSPFHAPPAPVWG------------PHGYMAPPPPPYDPYGGYGVPPVQMPAPA 203
TG+ A F A +W HG + P P + +PAPA
Sbjct: 126 LTGHLASPFFPGGGAELWHHPLAYGGELPTLSHGLVHPAIHPQMAPTPLTLGACVLPAPA 185
Query: 204 PVPAPSSYVPVQNTKDNP-------------------PCNTLFIGNLGESINEEELRGLF 244
+ +P + VP +P PC+TLF+ NLG+ ++E EL+ +F
Sbjct: 186 -LGSPGASVPPPAHPSHPQHPSHPAHPGHQAHPAHTAPCSTLFVANLGQFVSEHELKEIF 244
Query: 245 SAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
S+ GF +++++ V F+EF A++ +LQGA++ SS S ++++Y
Sbjct: 245 SSCSGFNRLRLMTGGNGPVAFVEFATTRDAAAARASLQGALLLSSESA-LQLEY 297
>gi|340716150|ref|XP_003396564.1| PREDICTED: protein couch potato-like [Bombus terrestris]
Length = 315
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 129/295 (43%), Gaps = 50/295 (16%)
Query: 39 DNTNRIA--HDEVRTIFITGLPDDVKERELQNLLRWLPGYEAS--QVNYKGEKPMGFALF 94
D+ N +A DEVRT+F++GLP D K REL L R GYE S +V K K + +
Sbjct: 10 DSVNTVATGEDEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASVSHY 69
Query: 95 STAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFV---KRGIVADTNAYDQSKRLRTG 151
K Q + FD + + E AK N V K+ A ++ TG
Sbjct: 70 -------FFKLPAQGVRFDPDMPQTIRLEFAKSNTKVSKPKQPAAAAATSHPALMHPLTG 122
Query: 152 GDYTHTGYSAPSPFHAPPAPVW-GPHGYMAPPPPPYDPYGGYGVPPV---QMPAPAPVPA 207
H G SPF +W P Y P V P Q+PAP +P
Sbjct: 123 ----HLG----SPFFPGGPELWHHPLAYSTAGELPGTLQHATLVHPALHPQVPAPMSLPH 174
Query: 208 PSSYVPVQNTK------------------------DNPPCNTLFIGNLGESINEEELRGL 243
P++ + + N PC+TLF+ NLG+ ++E EL+ +
Sbjct: 175 PTTLTSIHASLPHFLPSPALASPVGSPSSQPNIAVSNAPCSTLFVANLGQFVSEHELKDI 234
Query: 244 FSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
FS+ PGF ++++ + V F+E++DV A+ LQG+ + SS +RI+Y
Sbjct: 235 FSSFPGFSRLRMHTKGGSPVAFVEYQDVRYAAQAMATLQGSFLLSSDRGAIRIEY 289
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+F+ L V E EL+++ PG+ +++ KG P+ F + + A A LQ
Sbjct: 216 TLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTKGGSPVAFVEYQDVRYAAQAMATLQGS 275
Query: 111 IFDAETKSVLHTEMAKKNLFVKRGIVADTNAY-DQSKRLRTG 151
+ + + E AK K V TN + + SKR G
Sbjct: 276 FLLSSDRGAIRIEYAKS----KMAEVGFTNLWIEGSKREENG 313
>gi|2673920|gb|AAB88654.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 158
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 45 AHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-NYKGEKPMGFALFSTAQLAVAA 103
A DEVRT+F+ GLP+DVK RE+ NL R PGYE S + + G KP FA+FS Q AVA
Sbjct: 30 ARDEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSDGAKPFAFAVFSDLQSAVAV 89
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYS 160
AL M+FD E S LH ++AK N KR + T Y Q+ + + Y GYS
Sbjct: 90 MHALNGMVFDLEKHSTLHIDLAKSNPKSKR---SRTGKYFQTPGMSSSA-YNTIGYS 142
>gi|449681275|ref|XP_002157969.2| PREDICTED: uncharacterized protein LOC100208163 [Hydra
magnipapillata]
Length = 328
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 125/294 (42%), Gaps = 49/294 (16%)
Query: 45 AHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEK-----PMGFALFSTAQL 99
+ EVRT+F++GLP D K RE+ + R GY+ S + G++ P+ F F +
Sbjct: 22 SQQEVRTLFVSGLPMDTKPREIYLMFRSYSGYQGSLLKLTGKEGKKATPVAFVTFENREQ 81
Query: 100 AVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR-------------------------- 133
A K LQ + FD E + + E AK N V +
Sbjct: 82 AEVCKAELQGIRFDPELPTSIRIEFAKANTKVTKPVLIRPPSISGTTIIPGPGFPGFELT 141
Query: 134 -GIVA-------DTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPP 185
GI +TN D + T + H G + H+P P
Sbjct: 142 PGIFTPDMQWPQNTNFVDINGN-HTALQHLHPGITTLPLVHSPLLAYISPLDRFHALSLN 200
Query: 186 YDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFS 245
P V MP+ +P+ P+ D+ C TLF+ NLG + E+EL+ +F
Sbjct: 201 LSPNLS---STVNMPSHSPLIGN----PMLGL-DHHVCTTLFVANLGYNTTEDELKNMFG 252
Query: 246 AQPGFKQMKVLRQERHT-VCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
P F+++K+LR + T V F+E+ DV A + GAV+ +S + G+RI++
Sbjct: 253 RIPSFRRLKMLRNKGTTPVSFVEYSDVIGALHAKNIFHGAVLLTSENGGIRIEF 306
>gi|384501069|gb|EIE91560.1| hypothetical protein RO3G_16271 [Rhizopus delemar RA 99-880]
Length = 314
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 126/294 (42%), Gaps = 63/294 (21%)
Query: 63 ERELQNLLRWLPGYEASQVNY----------KGEKPM-GFALFSTAQLAVAAKDALQEMI 111
ERE QN+ + PG+EA+ + + +G+K M GFA F T A+ + + L
Sbjct: 3 EREFQNIFTFCPGFEAASLKWHCKDQQHNDIQGKKQMIGFARFKTRLEALESIEILNGKK 62
Query: 112 FDAETKSVLHTEMAKKNLFVKRGIVADTN---AYDQSKRLRTGGDYTHTGYS-APSPF-- 165
D E VL EMAKKNL +KR DT + R T G+ ++ G+S PS
Sbjct: 63 IDQEKGIVLKAEMAKKNLHIKRSFNTDTKSSASSSIVSRGETRGN-SYDGFSPLPSDLLQ 121
Query: 166 ------HAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQ--------------MPAPAPV 205
H+ ++ Y + +G+ P+
Sbjct: 122 NDTFMDHSLNDSLFTTRSYSFDQNLSF--ISRFGLSPLHYHQQQHQHQFINTTSTNTNNS 179
Query: 206 PAPSSYVPVQNTKDNP---------------------PCNTLFIGNLGESINEEELRGLF 244
+ Y +T+ +P PCNT+++GNL + +E+ELR LF
Sbjct: 180 QQHTRYKFKNDTESDPHYYHLSNQELSLPPRMMDGNPPCNTIYVGNLPSTTSEDELRALF 239
Query: 245 SAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
S G+++M + + +CF+EFED+ AS +LQG + +S G+R+ +
Sbjct: 240 SNCKGYRRMCF--RTKGPMCFVEFEDILCASQAIKDLQGYTLSNSAKSGVRLSF 291
>gi|405952772|gb|EKC20544.1| Protein couch potato [Crassostrea gigas]
Length = 318
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 120/297 (40%), Gaps = 65/297 (21%)
Query: 60 DVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFALFSTAQLAVAAKDALQEMIFDA 114
D K REL L R GYE S + N K P+GF FS+ A AAK LQ + FD
Sbjct: 2 DAKPRELYLLFRAYKGYEGSLLKVTNKNGKNTSPVGFVTFSSRSAAEAAKQDLQGVRFDP 61
Query: 115 ETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKR-LRTGGDYTH--TGYSAPSPFHAPPAP 171
+ L E AK N V T QS + T H TG + F
Sbjct: 62 DLPQTLRLEFAKSNTKV-------TKPKQQSPQPAATHPTLIHPITGQELSAAFFPGATE 114
Query: 172 VWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVP-----------APSSYVP------- 213
W PH A P + +Q PA A VP A S+ +P
Sbjct: 115 TWAPHPLAAYPELAAPTAALHHHALIQHPALAQVPIHHPTMVASPQAVSAALPHPPIAAT 174
Query: 214 --------------------VQNTKD------------NPPCNTLFIGNLGESINEEELR 241
VQ T N PC+TLF+ NLG+ +E+EL+
Sbjct: 175 PILTSPLSTSVSTAGAGTLQVQQTSSQSPGVSMAAHTSNSPCSTLFVANLGQFSSEQELK 234
Query: 242 GLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
LF++ GF ++++ + V F+EF+DV A+ LQG V+ SS G+RI+Y
Sbjct: 235 DLFNSFQGFSRLRMHNKGGSPVAFVEFQDVRQAAEAMGRLQGFVLLSSDRGGIRIEY 291
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+F+ L E+EL++L G+ +++ KG P+ F F + A A LQ
Sbjct: 218 TLFVANLGQFSSEQELKDLFNSFQGFSRLRMHNKGGSPVAFVEFQDVRQAAEAMGRLQGF 277
Query: 111 IFDAETKSVLHTEMAKKNL 129
+ + + + E AK +
Sbjct: 278 VLLSSDRGGIRIEYAKNKM 296
>gi|198423670|ref|XP_002129832.1| PREDICTED: similar to MEChanosensory abnormality family member
(mec-8) [Ciona intestinalis]
Length = 359
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 126/303 (41%), Gaps = 63/303 (20%)
Query: 37 PYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-----KGEKPMGF 91
P N N +EVRT+F++GLP D K+REL L R GYE S + K P+GF
Sbjct: 69 PDTNNNNAKEEEVRTLFVSGLPADAKKRELYLLFRGFTGYEGSIIRTTAKPGKAPVPVGF 128
Query: 92 ALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTG 151
F + A AK++LQ + FD E L E AK N VK + + A + + +
Sbjct: 129 VTFDSRGEADLAKNSLQGIKFDPELPHTLRLEFAKANTKVK--LRPSSPAQELANHI--- 183
Query: 152 GDYTHTGYSAPSPFHAP---PAPVWGPHGYMAPPPPPYDPY----GGYGVPP--VQMPAP 202
GY P F + PA ++G PY Y G+ P Q+ AP
Sbjct: 184 -----IGY-LPQQFGSANLLPAEIFG---------QPYSSYPELLQGFQTHPSVTQVGAP 228
Query: 203 APV-PAPSSYVPV--------------------------QNTKDNPPCNTLFIGNLGESI 235
V PA P+ Q P + L + N+G
Sbjct: 229 LQVTPALHHIAPIHPAQPPPHGAIFTHLAGAPMMNLALGQANGTTAPTSCLLVCNIGGGT 288
Query: 236 NEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMR 295
E+EL+ +FS G+ + K++ + +EF D +AS H+LQG + + MR
Sbjct: 289 TEKELKDIFSRFHGYVRAKLINRGGMLCAVVEFTDAGTASYALHSLQGTRLNDRSA--MR 346
Query: 296 IQY 298
I++
Sbjct: 347 IEF 349
>gi|307184926|gb|EFN71193.1| Protein couch potato [Camponotus floridanus]
Length = 358
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 119/276 (43%), Gaps = 45/276 (16%)
Query: 60 DVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFALFSTAQLAVAAKDALQEMI-FD 113
D K REL L R GYE S + N K P+GF F T A AAK LQ+ + FD
Sbjct: 2 DTKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAAKQDLQQGVRFD 61
Query: 114 AETKSVLHTEMAKKNLFV---KRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPA 170
+ + E AK N V K+ A ++ TG H G SPF
Sbjct: 62 PDMPQTIRLEFAKSNTKVSKPKQPAAAAATSHPALMHPLTG----HLG----SPFFPGGP 113
Query: 171 PVW-GPHGYMAPPPPPYDPYGGYGVPPV---QMPAPAPVPAPSSYVPVQNTK-------- 218
+W P Y P V P Q+PAP +P P++ + +
Sbjct: 114 ELWHHPLAYSTAGELPGTLQHATLVHPALHPQVPAPMSLPHPTTLTSIHASLPHFLPSPA 173
Query: 219 ----------------DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT 262
N C+TLF+ NLG+ ++E EL+ +FS+ PGF ++++ +
Sbjct: 174 LASPVGSPSSQPNIAVSNAQCSTLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTKGGSP 233
Query: 263 VCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
V F+E++DV A+ LQG+ + SS +RI+Y
Sbjct: 234 VAFVEYQDVRYAAQAMATLQGSFLLSSDRGAIRIEY 269
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Query: 19 PPPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEA 78
P P A+ +P P + N + T+F+ L V E EL+++ PG+
Sbjct: 170 PSPALASPVGSPSSQPNIAVSNA------QCSTLFVANLGQFVSEHELKDIFSSFPGFSR 223
Query: 79 SQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNL 129
+++ KG P+ F + + A A LQ + + + E AK +
Sbjct: 224 LRMHTKGGSPVAFVEYQDVRYAAQAMATLQGSFLLSSDRGAIRIEYAKSKM 274
>gi|242014736|ref|XP_002428041.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512560|gb|EEB15303.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 363
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 133/330 (40%), Gaps = 78/330 (23%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFALFSTAQLA 100
+ +VRT+F++GLP D K REL L R GYE S + N K P+GF F+T A
Sbjct: 17 YSDVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFNTRAGA 76
Query: 101 VAAKDALQEMIFDAETKSVLHTEMAKKNLFV---KRGIVADTNAYDQSKRLRTG------ 151
AAK LQ + FD + + E AK N V K+ A A+ TG
Sbjct: 77 EAAKQDLQGVRFDPDLPQTIRLEFAKSNTKVSKPKQPAAASATAHPTLVHSLTGHLSAPF 136
Query: 152 ----GDYTH---TGYSAPSPFHA-PPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPA 203
+ H YSA P A A + P + PP P+ + + P
Sbjct: 137 FPGAAELWHHPALAYSAELPGAALQHAALVHPALHPQVPPSLSIPHP-TALTSIHASLPH 195
Query: 204 PVPAPSSYVPVQNTKD---NPPCNTLFIGNLGESINEEELRGLFSAQ------------- 247
+P+P PV ++ NPPC+TLF+ NLG+ ++E EL+ +FS+
Sbjct: 196 FLPSPGLASPVGSSASQPANPPCSTLFVANLGQFVSEHELKEIFSSHNIVVVLLCPRRLS 255
Query: 248 ------------------------------------PGFKQMKVLRQERHT---VCFIEF 268
PGF ++++ + + V F+EF
Sbjct: 256 VKYGGGGEDAIREREKVMTSRNISQKALVDCVCRILPGFSRLRMHAKGQGGGSPVAFVEF 315
Query: 269 EDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+DV A L G + SS +R++Y
Sbjct: 316 QDVRCAGHAKAALHGTFLLSSDRGAIRVEY 345
>gi|343172665|gb|AEL99036.1| RNA recognition motif-containing protein, partial [Silene
latifolia]
Length = 226
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 100/236 (42%), Gaps = 29/236 (12%)
Query: 75 GYEASQVNY--KGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVK 132
G+++ Q+ + +G + + F F Q AV A AL + FD + +VLH E+A+ N K
Sbjct: 1 GFDSCQLKFTGRGNQVVAFVTFFNHQSAVLALQALDGVQFDPQDGTVLHIELARSNSRRK 60
Query: 133 RG------IVADTNAYDQSKRLRTGGD----YTHTGYSAPSPFHAPPAPVWGPHGYMAPP 182
R +V D KR + D + G + + H
Sbjct: 61 RKSGSGPYVVID-------KRRKAANDAEEMSSEDGDNESNNSHQSEDQDQNNSSGDDEQ 113
Query: 183 PPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRG 242
+ + A P SS D PC+TLFI NLG EEEL+
Sbjct: 114 TDEKSDVKKADLNDPKYAANKPTEKTSS--------DLQPCSTLFIANLGSKCKEEELKQ 165
Query: 243 LFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
S PGFK +K R+ + TV F ++E+V A++ LQG +PSS M I+Y
Sbjct: 166 ALSEYPGFKGLK--RRGKGTVAFADYEEVEQATNAMQGLQGTTLPSSDKGAMVIEY 219
>gi|212723796|ref|NP_001132012.1| uncharacterized protein LOC100193418 [Zea mays]
gi|194693198|gb|ACF80683.1| unknown [Zea mays]
gi|413934627|gb|AFW69178.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
gi|413934628|gb|AFW69179.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
Length = 203
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 45 AHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-KGEKPMGFALFSTAQLAVAA 103
A DEVRT+FI GLP D K RE+ NL R PGY +S + K + FA+F+ Q A+AA
Sbjct: 53 ARDEVRTLFIAGLPADAKPREVYNLFRDFPGYVSSHLRTGKSSQAYAFAVFADQQSALAA 112
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLR 149
A M+FD E LH ++AK N KR DT+ Y KR R
Sbjct: 113 LSATNGMVFDLEKNCSLHVDLAKSNSRSKRLRSDDTSPYSPEKRNR 158
>gi|413934629|gb|AFW69180.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
Length = 208
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 45 AHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-KGEKPMGFALFSTAQLAVAA 103
A DEVRT+FI GLP D K RE+ NL R PGY +S + K + FA+F+ Q A+AA
Sbjct: 53 ARDEVRTLFIAGLPADAKPREVYNLFRDFPGYVSSHLRTGKSSQAYAFAVFADQQSALAA 112
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLR 149
A M+FD E LH ++AK N KR DT+ Y KR R
Sbjct: 113 LSATNGMVFDLEKNCSLHVDLAKSNSRSKRLRSDDTSPYSPEKRNR 158
>gi|255637677|gb|ACU19162.1| unknown [Glycine max]
Length = 189
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 46 HDE---VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGE--KPMGFALFSTAQLA 100
HDE + T+F++GLPDDVK RE+ NL R PG+++ Q+ Y G + + FA F Q A
Sbjct: 14 HDEQSNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQVVAFATFFNHQSA 73
Query: 101 VAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
+AA AL + FD +T SVLH E+A+ N KR
Sbjct: 74 MAALHALNGVKFDPQTGSVLHIELARSNSRRKR 106
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 223 CNTLFIGNLGESINEEELRGLFSAQPGFK--QMKVLRQERHTVCFIEFEDVNSASSVHHN 280
NTLF+ L + + E+ LF +PGF Q+K + V F F + SA + H
Sbjct: 20 INTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQVVAFATFFNHQSAMAALHA 79
Query: 281 LQGAVI-PSSGSV 292
L G P +GSV
Sbjct: 80 LNGVKFDPQTGSV 92
>gi|343172667|gb|AEL99037.1| RNA recognition motif-containing protein, partial [Silene
latifolia]
Length = 226
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 101/237 (42%), Gaps = 31/237 (13%)
Query: 75 GYEASQVNY--KGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVK 132
G+++ Q+ + +G + + F F Q AV A AL + FD + +VLH E+A+ N K
Sbjct: 1 GFDSCQLKFTGRGNQVVAFVTFFNHQSAVLALQALDGVQFDPQDGTVLHIELARSNSRRK 60
Query: 133 RG------IVADTNAYDQSKRLRTGGD----YTHTGYSAPSPFHAPPAPVWGPHGYMAPP 182
R +V D KR + D + G + + H +
Sbjct: 61 RKSGSGPYVVID-------KRRKAANDAEEMSSEDGDNESNNSHQSEDQ---DQNNSSSD 110
Query: 183 PPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTK-DNPPCNTLFIGNLGESINEEELR 241
D + P A P + T D PC+TLFI NLG EEEL+
Sbjct: 111 DEQTDEKSDVKKADLNDPKDAANK------PTEKTSGDLQPCSTLFIANLGSKCKEEELK 164
Query: 242 GLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
S GFK +K R+ + TV F ++E+V A++ LQG +PSS M I+Y
Sbjct: 165 QALSEYHGFKGLK--RRVKGTVAFADYEEVEQATNAMQGLQGTTLPSSDKGAMVIEY 219
>gi|115469616|ref|NP_001058407.1| Os06g0687500 [Oryza sativa Japonica Group]
gi|52077025|dbj|BAD46058.1| RNA-binding protein-like [Oryza sativa Japonica Group]
gi|113596447|dbj|BAF20321.1| Os06g0687500 [Oryza sativa Japonica Group]
gi|215692539|dbj|BAG87959.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 219
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGE--KPMGFALFSTAQLAVAAK 104
DE+RT+FI GLP D K RE+ NL R PGY +S + G+ + FA+F+ A+AA
Sbjct: 66 DELRTLFIAGLPGDAKAREVYNLFRDFPGYVSSHLRTSGKSSQAYAFAVFADQPSALAAM 125
Query: 105 DALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLR 149
A IFD E LH ++AK N KR D +Y K+ R
Sbjct: 126 SATNGRIFDLENNCTLHVDLAKSNSRSKRSRTDDVPSYSSEKKAR 170
>gi|312086378|ref|XP_003145052.1| hypothetical protein LOAG_09478 [Loa loa]
Length = 396
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 53/79 (67%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHH 279
+P C+TLF+ NLG+ I E+EL+ +F A PGF ++++ + TV F+EF DV A+ V +
Sbjct: 306 SPACSTLFVANLGDGITEDELKAVFCAYPGFTRLRLHTRNDTTVAFVEFRDVRQATLVMN 365
Query: 280 NLQGAVIPSSGSVGMRIQY 298
LQG I SS G+RI+Y
Sbjct: 366 ALQGCRISSSHRGGIRIEY 384
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEK------PMGFALFSTAQLAVA 102
VRT+F++GLP D K+REL L R GYE S + K P+GF FS+A+ A
Sbjct: 38 VRTLFVSGLPMDAKQRELYLLFRSCRGYENSLLRITQSKDGGIASPVGFVTFSSAEDADI 97
Query: 103 AKDALQEMIFDAETKSVLHTEMAKKNLFV 131
A LQ ++FD T + E AK N V
Sbjct: 98 AMKTLQSVLFDPTTGHKIRLEKAKSNTKV 126
>gi|393910177|gb|EFO19018.2| hypothetical protein LOAG_09478 [Loa loa]
Length = 395
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 53/79 (67%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHH 279
+P C+TLF+ NLG+ I E+EL+ +F A PGF ++++ + TV F+EF DV A+ V +
Sbjct: 306 SPACSTLFVANLGDGITEDELKAVFCAYPGFTRLRLHTRNDTTVAFVEFRDVRQATLVMN 365
Query: 280 NLQGAVIPSSGSVGMRIQY 298
LQG I SS G+RI+Y
Sbjct: 366 ALQGCRISSSHRGGIRIEY 384
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEK------PMGFALFSTAQLAVA 102
VRT+F++GLP D K+REL L R GYE S + K P+GF FS+A+ A
Sbjct: 38 VRTLFVSGLPMDAKQRELYLLFRSCRGYENSLLRITQSKDGGIASPVGFVTFSSAEDADI 97
Query: 103 AKDALQEMIFDAETKSVLHTEMAKKNLFV 131
A LQ ++FD T + E AK N V
Sbjct: 98 AMKTLQSVLFDPTTGHKIRLEKAKSNTKV 126
>gi|307136276|gb|ADN34103.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 113
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 8/98 (8%)
Query: 33 PPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--KGEKPMG 90
P P D +N + T+FI+GLPDDVK RE+ NL R PG+++ Q+ Y +G + +
Sbjct: 15 PDPTYSDRSN------INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVA 68
Query: 91 FALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKN 128
FA F Q AV A AL + FD ++ SVLH E+A+ N
Sbjct: 69 FATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSN 106
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 21/111 (18%)
Query: 185 PYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLF 244
PYDPY Y P P + + N NTLFI L + + E+ LF
Sbjct: 5 PYDPYYLYNQPD----------------PTYSDRSN--INTLFISGLPDDVKAREIHNLF 46
Query: 245 SAQPGFK--QMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVI-PSSGSV 292
+PGF Q+K + V F F + SA + H L G P SGSV
Sbjct: 47 RRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSV 97
>gi|9294016|dbj|BAB01919.1| unnamed protein product [Arabidopsis thaliana]
Length = 271
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 107/237 (45%), Gaps = 30/237 (12%)
Query: 73 LPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVK 132
L ++ S+V Y + + FA F++ + A+AA + L + FD +T S LH E+A+ N K
Sbjct: 39 LSMFKLSEVTYL--QVVAFATFTSHRFALAAMNELNGVKFDPQTGSNLHIELARSNSRRK 96
Query: 133 RG------IVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPPY 186
+V D + SK + D + G S P P + P
Sbjct: 97 ERPGSGPYVVIDNRNKEISK---SQDDQSDEGDSDPDEVQEPGN---------SDSPKEN 144
Query: 187 DPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDN----PPCNTLFIGNLGESINEEELRG 242
D + + APS+ ++ + C+TLFI NLG + E+EL+
Sbjct: 145 D------TTKSEADSEPDSKAPSANGHLEKASEGGSGARACSTLFIANLGPNCTEDELKQ 198
Query: 243 LFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYP 299
L S PGF +K+ + V F +FE++ A+ ++LQG ++ SS GM I YP
Sbjct: 199 LLSRYPGFHILKIRARGGMPVAFADFEEIEQATDAMNHLQGNLLSSSDRGGMHIDYP 255
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+FI L + E EL+ LL PG+ ++ +G P+ FA F + A A + LQ
Sbjct: 181 TLFIANLGPNCTEDELKQLLSRYPGFHILKIRARGGMPVAFADFEEIEQATDAMNHLQGN 240
Query: 111 IFDAETKSVLHTE 123
+ + + +H +
Sbjct: 241 LLSSSDRGGMHID 253
>gi|115433500|ref|XP_001216887.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114189739|gb|EAU31439.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 599
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 71/141 (50%), Gaps = 23/141 (16%)
Query: 180 APPPPPYDPYGGYGVPPVQMPAPAPVPAPS---------------------SYVPVQNTK 218
+PPP Y P GG P + +P P+ APS +P N
Sbjct: 339 SPPPQNYTP-GGSAQPQMGLPTPSSAYAPSLNSNMVGAPSMGMYGNPHTPRHSLPAANPN 397
Query: 219 D-NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSV 277
D NPPCNTL++GNL +EEEL+ LF Q G+K++ ++ +CF+EFEDV +A
Sbjct: 398 DMNPPCNTLYVGNLPPDASEEELKALFIKQRGYKRLCFRNKQNGPMCFVEFEDVGTAGKT 457
Query: 278 HHNLQGAVIPSSGSVGMRIQY 298
H L G + +S G+R+ +
Sbjct: 458 LHELYGYRLSNSVKTGIRLSF 478
>gi|384499199|gb|EIE89690.1| hypothetical protein RO3G_14401 [Rhizopus delemar RA 99-880]
Length = 400
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 204 PVPAPS-SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQM--KVLRQER 260
P+P PS S + NPPCNTL++GNL N+EELR LFS G+K+M ++ Q++
Sbjct: 274 PMPTPSLSRLSAATMDQNPPCNTLYVGNLPLCTNQEELRSLFSKCLGYKRMSFRIKSQQQ 333
Query: 261 HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+CF+EFEDV AS LQG + +S G+R+ +
Sbjct: 334 GPMCFVEFEDVLCASQAMSQLQGFALSNSLKGGIRLSF 371
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 66/128 (51%), Gaps = 20/128 (15%)
Query: 21 PPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEAS- 79
P +AA + PVP D V TIF+ G PDD++ERE QN+ + G+E +
Sbjct: 19 PTLSAAQSLFSGTSPVPED---------VTTIFVVGFPDDMQEREFQNMFLFSKGFEGAS 69
Query: 80 ---------QVNYKGEKPM-GFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNL 129
+ N +K M GFA F+T A+ A D L D+E S+L EMAKKNL
Sbjct: 70 LKWHCKQDEETNENNKKQMIGFARFATRSEAIEAVDVLNGRKVDSEKSSILKAEMAKKNL 129
Query: 130 FVKRGIVA 137
+K+G+ A
Sbjct: 130 HIKKGVNA 137
>gi|224084380|ref|XP_002307278.1| predicted protein [Populus trichocarpa]
gi|222856727|gb|EEE94274.1| predicted protein [Populus trichocarpa]
Length = 97
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVN--YKGEKPMGFALFSTAQLAV 101
+++D+VR +F+ GLPDD+K E+ +L R PGYE+S + + +P FA F+ AV
Sbjct: 5 VSYDQVRILFVAGLPDDIKPSEIYSLFREFPGYESSHLRSPSQNSQPFAFATFADQPSAV 64
Query: 102 AAKDALQEMIFDAETKSVLHTEMAKKN 128
AA AL M+FD E S L+T++AK N
Sbjct: 65 AAMHALNGMVFDLERGSTLYTDLAKSN 91
>gi|170583984|ref|XP_001896809.1| RNA binding protein [Brugia malayi]
gi|158595852|gb|EDP34335.1| RNA binding protein, putative [Brugia malayi]
Length = 367
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 53/79 (67%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHH 279
+P C+TLF+ NLG+ + E+EL+ +F A PGF ++++ + TV F+EF DV A+ V +
Sbjct: 277 SPACSTLFVANLGDGVTEDELKAVFCAYPGFTRLRLHTRNDTTVAFVEFRDVRQATLVMN 336
Query: 280 NLQGAVIPSSGSVGMRIQY 298
LQG I SS G+RI+Y
Sbjct: 337 ALQGCRISSSHRGGIRIEY 355
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 42 NRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEK------PMGFALFS 95
N ++ VRT+F++GLP D K+REL L R GYE S + K P+GF FS
Sbjct: 31 NITGNEPVRTLFVSGLPMDAKQRELYLLFRSCRGYENSLLRITQSKDGGIASPVGFVTFS 90
Query: 96 TAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
+A+ A A ALQ +FD T + E AK N V +
Sbjct: 91 SAEDAEIAMKALQSALFDPITGHKIRLEKAKSNTKVAK 128
>gi|402075260|gb|EJT70731.1| RNA binding protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 620
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 57/89 (64%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
++ PV NPPCNTL++GNL +EEEL+ FS Q G+K++ ++ +CF+EFE
Sbjct: 417 NFPPVNPADQNPPCNTLYVGNLPIDTSEEELKATFSKQRGYKRLCFRTKQNGPMCFVEFE 476
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
DV+ A+ H+L G ++ +S G+R+ +
Sbjct: 477 DVSFATKALHDLYGHMLHNSVKGGIRLSF 505
>gi|320589895|gb|EFX02351.1| RNA-binding protein [Grosmannia clavigera kw1407]
Length = 562
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 213 PVQNTKD-NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDV 271
P N D NPPCNTL++GN+ +EEEL+ LFS Q G+K++ V + +CF+EFED+
Sbjct: 336 PAANPADQNPPCNTLYVGNIPMDTSEEELKALFSKQRGYKRLSVRSKGNGPMCFVEFEDI 395
Query: 272 NSASSVHHNLQGAVIPSSGSVGMRIQY 298
+ A+ + L GA + S G+R+ +
Sbjct: 396 SFATKTLYELYGAALRGSTRGGIRLSF 422
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 32/83 (38%)
Query: 50 RTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQE 109
T+++ +P D E EL+ L GY+ V KG PM F F A L
Sbjct: 348 NTLYVGNIPMDTSEEELKALFSKQRGYKRLSVRSKGNGPMCFVEFEDISFATKTLYELYG 407
Query: 110 MIFDAETKSVLHTEMAKKNLFVK 132
T+ + +K L V+
Sbjct: 408 AALRGSTRGGIRLSFSKNPLGVR 430
>gi|116193039|ref|XP_001222332.1| hypothetical protein CHGG_06237 [Chaetomium globosum CBS 148.51]
gi|88182150|gb|EAQ89618.1| hypothetical protein CHGG_06237 [Chaetomium globosum CBS 148.51]
Length = 650
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 57/90 (63%)
Query: 209 SSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEF 268
+++ P NPPCNTL++GNL +EEEL+ LFS Q G+K++ ++ +CF+EF
Sbjct: 450 NNFPPANPADQNPPCNTLYVGNLPLDTSEEELKALFSRQRGYKRLCFRTKQNGPMCFVEF 509
Query: 269 EDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
EDV A+ H+L G ++ +S G+R+ +
Sbjct: 510 EDVTFATKALHDLYGQLLHNSVKGGIRLSF 539
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 48/134 (35%), Gaps = 4/134 (2%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+++ LP D E EL+ L GY+ K PM F F A A L
Sbjct: 466 TLYVGNLPLDTSEEELKALFSRQRGYKRLCFRTKQNGPMCFVEFEDVTFATKALHDLYGQ 525
Query: 111 IFDAETKSVLHTEMAKKNLFVKRGIVADTN---AYDQSKRLRTGGDYTHTGYSAPSP-FH 166
+ K + +K L V+ G N A + +G + T + P P
Sbjct: 526 LLHNSVKGGIRLSFSKNPLGVRSGQNQAQNGAGALGSMNGIHSGSNGGFTTANGPPPGLS 585
Query: 167 APPAPVWGPHGYMA 180
APP GY A
Sbjct: 586 APPGLGSNRSGYTA 599
>gi|429852927|gb|ELA28038.1| RNA binding protein [Colletotrichum gloeosporioides Nara gc5]
Length = 518
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 4/120 (3%)
Query: 179 MAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEE 238
M+P P+GG P M P A ++ PV NPPCNTL++GNL +EE
Sbjct: 297 MSPTVLGSGPHGGM---PFHMAGGHPY-ARHNFPPVNPADQNPPCNTLYVGNLPIDTSEE 352
Query: 239 ELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
EL+ +FS Q G+K++ ++ +CF+EFEDV+ A+ H+L G + +S G+R+ +
Sbjct: 353 ELKAMFSKQRGYKRLCFRTKQNGPMCFVEFEDVSFATKALHDLYGQPLHNSVKGGIRLSF 412
>gi|340975878|gb|EGS22993.1| putative RNA binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 586
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%)
Query: 211 YVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFED 270
Y P+ NPPCNTL++GNL +EEEL+ +FS Q G+K++ + +CF+EFED
Sbjct: 396 YPPINPADQNPPCNTLYVGNLPHDTSEEELKAMFSKQRGYKRLCFRTKANGPMCFVEFED 455
Query: 271 VNSASSVHHNLQGAVIPSSGSVGMRIQY 298
V A+ H L G + +S G+R+ +
Sbjct: 456 VTFATKALHELYGQPLHNSVKGGIRLSF 483
>gi|389645993|ref|XP_003720628.1| RNA binding protein [Magnaporthe oryzae 70-15]
gi|86196803|gb|EAQ71441.1| hypothetical protein MGCH7_ch7g848 [Magnaporthe oryzae 70-15]
gi|351638020|gb|EHA45885.1| RNA binding protein [Magnaporthe oryzae 70-15]
gi|440479486|gb|ELQ60251.1| RNA binding protein [Magnaporthe oryzae P131]
Length = 622
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 56/89 (62%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
S+ PV NPPCNTL++GNL +EEEL+ FS Q G+K++ ++ +CF+EFE
Sbjct: 404 SFPPVNPADQNPPCNTLYVGNLPIDTSEEELKATFSKQRGYKRLCFRTKQNGPMCFVEFE 463
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
DV+ A+ H L G ++ +S G+R+ +
Sbjct: 464 DVSFATKALHELYGHMLHNSVKGGIRLSF 492
>gi|440472158|gb|ELQ41041.1| RNA binding protein [Magnaporthe oryzae Y34]
Length = 622
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 56/89 (62%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
S+ PV NPPCNTL++GNL +EEEL+ FS Q G+K++ ++ +CF+EFE
Sbjct: 404 SFPPVNPADQNPPCNTLYVGNLPIDTSEEELKATFSKQRGYKRLCFRTKQNGPMCFVEFE 463
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
DV+ A+ H L G ++ +S G+R+ +
Sbjct: 464 DVSFATKALHELYGHMLHNSVKGGIRLSF 492
>gi|322709618|gb|EFZ01194.1| RNA binding protein [Metarhizium anisopliae ARSEF 23]
Length = 564
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Query: 178 YMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINE 237
YM P P P G G P P ++ PV NPPCNTL++GNL +E
Sbjct: 334 YMTPLSPANAPAPGLGYPVNGHSFPR-----HNFPPVNPADQNPPCNTLYVGNLPIDTSE 388
Query: 238 EELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQ 297
EEL+ +FS Q G+K++ ++ +CF+EFEDV+ A+ H L G + +S G+R+
Sbjct: 389 EELKAMFSKQRGYKRLCFRTKQNGPMCFVEFEDVSFATKALHELYGQPLHNSVKGGIRLS 448
Query: 298 Y 298
+
Sbjct: 449 F 449
>gi|239611843|gb|EEQ88830.1| RNA binding protein [Ajellomyces dermatitidis ER-3]
Length = 531
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y PV NPPCNTL++GNL +E+EL+ LF+ Q G+K++ ++ +CF+EFE
Sbjct: 368 NYPPVNPADQNPPCNTLYVGNLPHDTSEDELKALFTKQRGYKRLCFRNKQNGPMCFVEFE 427
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
D++ A+ H L G + +S G+R+ +
Sbjct: 428 DISFATKALHELYGYQLSNSVKGGIRLSF 456
>gi|380482693|emb|CCF41081.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 519
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 75/147 (51%), Gaps = 20/147 (13%)
Query: 154 YTHTGYSAPS--PFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSY 211
Y G SA S P +P A GPH P + PYG + PPV PA
Sbjct: 284 YGQQGMSAISAHPVMSPTAMGGGPHSVPFPMGGNH-PYGRHNFPPVN-------PA---- 331
Query: 212 VPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDV 271
NPPCNTL++GNL +EEEL+ +FS Q G+K++ ++ +CF+EFEDV
Sbjct: 332 ------DQNPPCNTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNGPMCFVEFEDV 385
Query: 272 NSASSVHHNLQGAVIPSSGSVGMRIQY 298
+ A+ H L G + +S G+R+ +
Sbjct: 386 SFATKALHELYGHPLHNSVKGGIRLSF 412
>gi|154285786|ref|XP_001543688.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150407329|gb|EDN02870.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 408
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y PV NPPCNTL++GNL +E+EL+ LF+ Q G+K++ ++ +CF+EFE
Sbjct: 196 NYPPVNPADQNPPCNTLYVGNLPHDTSEDELKALFTKQRGYKRLCFRNKQNGPMCFVEFE 255
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
D++ A+ H L G + +S G+R+ +
Sbjct: 256 DISFATKALHELYGYQLSNSVKGGIRLSF 284
>gi|295657738|ref|XP_002789435.1| RNA binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283857|gb|EEH39423.1| RNA binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 583
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y PV NPPCNTL++GNL +E+EL+ LF+ Q G+K++ ++ +CF+EFE
Sbjct: 367 NYPPVNPADQNPPCNTLYVGNLPHDTSEDELKSLFTKQRGYKRLCFRNKQNGPMCFVEFE 426
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
D++ A+ H L G + +S G+R+ +
Sbjct: 427 DISFATKALHELYGYQLSNSVKGGIRLSF 455
>gi|225558198|gb|EEH06482.1| RNA binding protein [Ajellomyces capsulatus G186AR]
Length = 591
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y PV NPPCNTL++GNL +E+EL+ LF+ Q G+K++ ++ +CF+EFE
Sbjct: 379 NYPPVNPADQNPPCNTLYVGNLPHDTSEDELKALFTKQRGYKRLCFRNKQNGPMCFVEFE 438
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
D++ A+ H L G + +S G+R+ +
Sbjct: 439 DISFATKALHELYGYQLSNSVKGGIRLSF 467
>gi|62203475|gb|AAH92476.1| RNA binding protein with multiple splicing [Homo sapiens]
Length = 219
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 55/96 (57%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 77
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
K+AL + FD E L E AK N + + + +T
Sbjct: 78 KNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVET 113
>gi|41053746|ref|NP_956553.1| RNA binding protein with multiple splicing 2b [Danio rerio]
gi|29124508|gb|AAH48876.1| RNA binding protein with multiple splicing 2 [Danio rerio]
gi|42542540|gb|AAH66414.1| Rbpms2 protein [Danio rerio]
gi|45126693|dbj|BAD12195.1| RNA binding protein [Danio rerio]
Length = 200
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 55/100 (55%)
Query: 40 NTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQL 99
N N +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F +
Sbjct: 10 NNNVSLEEEVRTLFVSGLPTDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDSRSG 69
Query: 100 AVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
A AAK+AL + FD E L E AK N + + + T
Sbjct: 70 AEAAKNALNGVRFDPENPQTLRLEFAKANTKMAKSKLMGT 109
>gi|410912397|ref|XP_003969676.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Takifugu rubripes]
Length = 259
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Query: 24 AAAAAAPPPPPPVPYD---NTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQ 80
AA A+ PP + D N N +EVRT+F++GLP D+K REL L R GYE S
Sbjct: 61 AAEASEPPVNMSLKTDAEPNNNVSIEEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSL 120
Query: 81 VNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKN 128
+ ++P+GF F + A AAK+AL + FD E L E AK N
Sbjct: 121 IKLTSKQPVGFVTFDSRSGAEAAKNALNGIRFDPENPQTLRLEFAKAN 168
>gi|338720949|ref|XP_003364277.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Equus caballus]
gi|350593442|ref|XP_003133441.3| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Sus scrofa]
gi|410956131|ref|XP_003984698.1| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Felis catus]
Length = 219
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 40 NTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQL 99
N + +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F +
Sbjct: 14 NEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSE 73
Query: 100 AVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
A AAK+AL + FD E L E AK N + + + T
Sbjct: 74 AEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 113
>gi|327279916|ref|XP_003224701.1| PREDICTED: RNA-binding protein with multiple splicing-like [Anolis
carolinensis]
Length = 255
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 76 LTEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 135
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
K+AL + FD E L E AK N + + + T
Sbjct: 136 KNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 171
>gi|350632868|gb|EHA21235.1| hypothetical protein ASPNIDRAFT_54716 [Aspergillus niger ATCC 1015]
Length = 611
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 208 PSSYVPVQNTKD-NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFI 266
P +P N D NPPCNTL++GNL +EEEL+ LFS Q G+K++ ++ +CF+
Sbjct: 389 PRHSLPAANPNDMNPPCNTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGPMCFV 448
Query: 267 EFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
EF+DV +A + L G + +S G+R+ +
Sbjct: 449 EFDDVGTAGKALNELYGVKLSNSIKTGIRLSF 480
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 34/85 (40%)
Query: 50 RTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQE 109
T+++ LP D E EL+ L GY+ K PM F F A A + L
Sbjct: 406 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFDDVGTAGKALNELYG 465
Query: 110 MIFDAETKSVLHTEMAKKNLFVKRG 134
+ K+ + +K L V+ G
Sbjct: 466 VKLSNSIKTGIRLSFSKNPLGVRSG 490
>gi|225683351|gb|EEH21635.1| RNA-binding protein Scw1 [Paracoccidioides brasiliensis Pb03]
Length = 594
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y PV NPPCNTL++GNL +E+EL+ LF+ Q G+K++ ++ +CF+EFE
Sbjct: 378 NYPPVNPADQNPPCNTLYVGNLPHDTSEDELKSLFTKQRGYKRLCFRNKQNGPMCFVEFE 437
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
D++ A+ H L G + +S G+R+ +
Sbjct: 438 DISFATKALHELYGYQLSNSVKGGIRLSF 466
>gi|145235395|ref|XP_001390346.1| RNA binding protein [Aspergillus niger CBS 513.88]
gi|134058028|emb|CAK38257.1| unnamed protein product [Aspergillus niger]
Length = 611
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 208 PSSYVPVQNTKD-NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFI 266
P +P N D NPPCNTL++GNL +EEEL+ LFS Q G+K++ ++ +CF+
Sbjct: 389 PRHSLPAANPNDMNPPCNTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGPMCFV 448
Query: 267 EFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
EF+DV +A + L G + +S G+R+ +
Sbjct: 449 EFDDVGTAGKALNELYGVKLSNSIKTGIRLSF 480
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 34/85 (40%)
Query: 50 RTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQE 109
T+++ LP D E EL+ L GY+ K PM F F A A + L
Sbjct: 406 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFDDVGTAGKALNELYG 465
Query: 110 MIFDAETKSVLHTEMAKKNLFVKRG 134
+ K+ + +K L V+ G
Sbjct: 466 VKLSNSIKTGIRLSFSKNPLGVRSG 490
>gi|358374685|dbj|GAA91275.1| RNA binding protein [Aspergillus kawachii IFO 4308]
Length = 609
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 208 PSSYVPVQNTKD-NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFI 266
P +P N D NPPCNTL++GNL +EEEL+ LFS Q G+K++ ++ +CF+
Sbjct: 387 PRHSLPAANPNDMNPPCNTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGPMCFV 446
Query: 267 EFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
EF+DV +A + L G + +S G+R+ +
Sbjct: 447 EFDDVGTAGKALNELYGVKLSNSIKTGIRLSF 478
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 34/85 (40%)
Query: 50 RTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQE 109
T+++ LP D E EL+ L GY+ K PM F F A A + L
Sbjct: 404 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFDDVGTAGKALNELYG 463
Query: 110 MIFDAETKSVLHTEMAKKNLFVKRG 134
+ K+ + +K L V+ G
Sbjct: 464 VKLSNSIKTGIRLSFSKNPLGVRSG 488
>gi|226286959|gb|EEH42472.1| RNA binding protein [Paracoccidioides brasiliensis Pb18]
Length = 582
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y PV NPPCNTL++GNL +E+EL+ LF+ Q G+K++ ++ +CF+EFE
Sbjct: 366 NYPPVNPADQNPPCNTLYVGNLPHDTSEDELKSLFTKQRGYKRLCFRNKQNGPMCFVEFE 425
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
D++ A+ H L G + +S G+R+ +
Sbjct: 426 DISFATKALHELYGYQLSNSVKGGIRLSF 454
>gi|417397319|gb|JAA45693.1| Putative rna-binding protein with multiple splicing-like isoform 2
equus caballus [Desmodus rotundus]
Length = 219
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 40 NTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQL 99
N + +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F +
Sbjct: 14 NEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSE 73
Query: 100 AVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
A AAK+AL + FD E L E AK N + + + T
Sbjct: 74 AEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 113
>gi|296472388|tpg|DAA14503.1| TPA: RNA-binding protein with multiple splicing [Bos taurus]
gi|440895026|gb|ELR47324.1| RNA-binding protein with multiple splicing [Bos grunniens mutus]
Length = 219
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 40 NTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQL 99
N + +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F +
Sbjct: 14 NEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSE 73
Query: 100 AVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
A AAK+AL + FD E L E AK N + + + T
Sbjct: 74 AEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 113
>gi|240277155|gb|EER40664.1| RNA binding protein [Ajellomyces capsulatus H143]
gi|325093977|gb|EGC47287.1| RNA binding protein [Ajellomyces capsulatus H88]
Length = 509
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y PV NPPCNTL++GNL +E+EL+ LF+ Q G+K++ ++ +CF+EFE
Sbjct: 297 NYPPVNPADQNPPCNTLYVGNLPHDTSEDELKALFTKQRGYKRLCFRNKQNGPMCFVEFE 356
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
D++ A+ H L G + +S G+R+ +
Sbjct: 357 DISFATKALHELYGYQLSNSVKGGIRLSF 385
>gi|114052324|ref|NP_001040000.1| RNA-binding protein with multiple splicing [Bos taurus]
gi|86438185|gb|AAI12765.1| RNA binding protein with multiple splicing [Bos taurus]
Length = 219
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 40 NTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQL 99
N + +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F +
Sbjct: 14 NEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSE 73
Query: 100 AVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
A AAK+AL + FD E L E AK N + + + T
Sbjct: 74 AEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 113
>gi|261201640|ref|XP_002628034.1| RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239590131|gb|EEQ72712.1| RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|327352905|gb|EGE81762.1| RNA binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 591
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y PV NPPCNTL++GNL +E+EL+ LF+ Q G+K++ ++ +CF+EFE
Sbjct: 379 NYPPVNPADQNPPCNTLYVGNLPHDTSEDELKALFTKQRGYKRLCFRNKQNGPMCFVEFE 438
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
D++ A+ H L G + +S G+R+ +
Sbjct: 439 DISFATKALHELYGYQLSNSVKGGIRLSF 467
>gi|449297722|gb|EMC93739.1| hypothetical protein BAUCODRAFT_48247, partial [Baudoinia
compniacensis UAMH 10762]
Length = 444
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 57/88 (64%)
Query: 211 YVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFED 270
Y PV NPPCNTL++GNL + +E+EL+ +FS Q G+K++ ++ +CF+EFED
Sbjct: 293 YPPVNPADQNPPCNTLYVGNLPINTSEDELKAIFSRQRGYKRLCFRTKQNGPMCFVEFED 352
Query: 271 VNSASSVHHNLQGAVIPSSGSVGMRIQY 298
V A+ ++L G V+ +S G+R+ +
Sbjct: 353 VGFATRALNDLYGFVLSNSVKGGIRLSF 380
>gi|322701438|gb|EFY93188.1| hypothetical protein MAC_00971 [Metarhizium acridum CQMa 102]
Length = 567
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 56/89 (62%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
++ PV NPPCNTL++GNL +EEEL+ +FS Q G+K++ ++ +CF+EFE
Sbjct: 363 NFPPVNPADQNPPCNTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNGPMCFVEFE 422
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
DV+ A+ H L G + +S G+R+ +
Sbjct: 423 DVSFATKALHELYGQPLHNSVKGGIRLSF 451
>gi|213404620|ref|XP_002173082.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
gi|212001129|gb|EEB06789.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
Length = 595
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 212 VPVQNTK---DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEF 268
+P+ NT NPPCNTL++GNL + E+ELR LFS Q G++++ + +CF+EF
Sbjct: 426 MPMVNTNPADQNPPCNTLYVGNLAANTKEDELRELFSRQRGYRRLCFRTKGISPMCFVEF 485
Query: 269 EDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
EDV A++ LQG + +S G+R+ +
Sbjct: 486 EDVKYATAALFELQGVCLSNSVKGGIRLSF 515
Score = 41.2 bits (95), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 1/122 (0%)
Query: 22 PPAAAAAAPPPPPPVPYDNTNRIAHDE-VRTIFITGLPDDVKERELQNLLRWLPGYEASQ 80
P + +++P P +P NTN + T+++ L + KE EL+ L GY
Sbjct: 412 PASRHSSSPKKPVVMPMVNTNPADQNPPCNTLYVGNLAANTKEDELRELFSRQRGYRRLC 471
Query: 81 VNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTN 140
KG PM F F + A AA LQ + K + +K L V+ T+
Sbjct: 472 FRTKGISPMCFVEFEDVKYATAALFELQGVCLSNSVKGGIRLSFSKNPLGVRSSADNATS 531
Query: 141 AY 142
+
Sbjct: 532 VF 533
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 57 LPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDAL 107
P D EREL + + PG++ +Q+ + +P+ A F+T LA AAK L
Sbjct: 121 FPKDFDERELFGIFTFCPGFKKAQLVREHGEPVAIATFTTPSLAAAAKQQL 171
>gi|213405979|ref|XP_002173761.1| cell wall integrity protein scw1 [Schizosaccharomyces japonicus
yFS275]
gi|212001808|gb|EEB07468.1| cell wall integrity protein scw1 [Schizosaccharomyces japonicus
yFS275]
Length = 565
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 203 APVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT 262
APV P V + NPPCNT+++GNL S +E+EL+ LFS QPG+K++ +
Sbjct: 420 APVTTP---VNINPADQNPPCNTIYVGNLPPSTSEDELKALFSTQPGYKRLCFRTKGNGP 476
Query: 263 VCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+CF+EFE + A+ LQG + SS G+R+ +
Sbjct: 477 MCFVEFESIAYATEALKALQGVCLSSSVKGGIRLSF 512
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 5/125 (4%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
TI++ LP E EL+ L PGY+ KG PM F F + A A ALQ +
Sbjct: 439 TIYVGNLPPSTSEDELKALFSTQPGYKRLCFRTKGNGPMCFVEFESIAYATEALKALQGV 498
Query: 111 IFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGG-DYTHTGYSAPSPFHAPP 169
+ K + +K L G+ + ++++ ++ L +G +Y + + +
Sbjct: 499 CLSSSVKGGIRLSFSKNPL----GVRSPSSSHSNNRNLHSGSVNYPNLSLLNQNNHNDTH 554
Query: 170 APVWG 174
P WG
Sbjct: 555 VPSWG 559
>gi|194226464|ref|XP_001915758.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Equus caballus]
gi|350593440|ref|XP_003483688.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Sus scrofa]
gi|410956133|ref|XP_003984699.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Felis catus]
Length = 196
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 40 NTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQL 99
N + +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F +
Sbjct: 14 NEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSE 73
Query: 100 AVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
A AAK+AL + FD E L E AK N + + + T
Sbjct: 74 AEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 113
>gi|367021232|ref|XP_003659901.1| hypothetical protein MYCTH_2297450 [Myceliophthora thermophila ATCC
42464]
gi|347007168|gb|AEO54656.1| hypothetical protein MYCTH_2297450 [Myceliophthora thermophila ATCC
42464]
Length = 565
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Query: 203 APVPAPSSYVPVQNTKD-NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERH 261
AP+P + P N D NPPCNTL++GNL +EEEL+ +FS Q G+K++ ++
Sbjct: 358 APMPHRMNNFPPANPADQNPPCNTLYVGNLPLDTSEEELKAMFSRQRGYKRLCFRTKQNG 417
Query: 262 TVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+CF+EFEDV A+ H L G + +S G+R+ +
Sbjct: 418 PMCFVEFEDVTFATKALHELYGQPLHNSVKGGIRLSF 454
>gi|301770903|ref|XP_002920867.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Ailuropoda melanoleuca]
Length = 195
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 40 NTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQL 99
N + +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F +
Sbjct: 13 NEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSE 72
Query: 100 AVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
A AAK+AL + FD E L E AK N + + + T
Sbjct: 73 AEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 112
>gi|348526652|ref|XP_003450833.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Oreochromis niloticus]
Length = 199
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 56/100 (56%)
Query: 40 NTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQL 99
N N +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F +
Sbjct: 10 NNNVSIEEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDSRSG 69
Query: 100 AVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
A AAK+AL + FD E+ L E AK N + + + T
Sbjct: 70 AEAAKNALNGIRFDPESPQTLRLEFAKANTKMAKSKLMAT 109
>gi|350578519|ref|XP_003121510.3| PREDICTED: RNA-binding protein with multiple splicing 2-like [Sus
scrofa]
Length = 327
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKD 105
+EVRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+
Sbjct: 144 EEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQPVGFVIFDSRAGAEAAKN 203
Query: 106 ALQEMIFDAETKSVLHTEMAKKNL-FVKRGIVADTN 140
AL + FD E L E AK N K ++A N
Sbjct: 204 ALNGIRFDPENPQTLRLEFAKANTKMAKNKLMATPN 239
>gi|310791144|gb|EFQ26673.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 539
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 68/133 (51%), Gaps = 28/133 (21%)
Query: 166 HAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNT 225
H+ P P+ G H PYG + PPV PA NPPCNT
Sbjct: 327 HSVPFPMGGNH-----------PYGRHNFPPVN-------PA----------DQNPPCNT 358
Query: 226 LFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAV 285
L++GNL +EEEL+ +FS Q G+K++ ++ +CF+EFEDV+ A+ H L G
Sbjct: 359 LYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNGPMCFVEFEDVSFATKALHELYGHP 418
Query: 286 IPSSGSVGMRIQY 298
+ +S G+R+ +
Sbjct: 419 LHNSVKGGIRLSF 431
>gi|398405022|ref|XP_003853977.1| hypothetical protein MYCGRDRAFT_38046 [Zymoseptoria tritici IPO323]
gi|339473860|gb|EGP88953.1| hypothetical protein MYCGRDRAFT_38046 [Zymoseptoria tritici IPO323]
Length = 499
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 76/153 (49%), Gaps = 24/153 (15%)
Query: 152 GDYTHTGYSAP---SPFHAPP---APVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPV 205
G + GY +P S H+P +P GPH P G Y M A P
Sbjct: 246 GHVSGNGYGSPRGTSALHSPVPPMSPTDGPHA---------GPNGQY------MAANYPR 290
Query: 206 PAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCF 265
P Y PV NPPCNTL++GNL +E+EL+ LFS Q G+K++ ++ +CF
Sbjct: 291 P---HYPPVNPADQNPPCNTLYVGNLPIDTSEDELKSLFSKQRGYKRLCFRTKQNGPMCF 347
Query: 266 IEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+EFED + A+ H L G + +S G+R+ +
Sbjct: 348 VEFEDTSFATKTLHELYGHPLHNSVKGGIRLSF 380
>gi|50539886|ref|NP_001002409.1| RNA binding protein with multiple splicing 2 [Danio rerio]
gi|166158150|ref|NP_001107477.1| uncharacterized protein LOC100135328 [Xenopus (Silurana)
tropicalis]
gi|49902931|gb|AAH76171.1| Zgc:92689 [Danio rerio]
gi|156230446|gb|AAI52179.1| Zgc:92689 [Danio rerio]
gi|163915769|gb|AAI57627.1| LOC100135328 protein [Xenopus (Silurana) tropicalis]
Length = 199
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%)
Query: 40 NTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQL 99
NT+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F +
Sbjct: 10 NTSVSLEEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDSRSG 69
Query: 100 AVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
A AAK+AL + FD E+ L E AK N + + + T
Sbjct: 70 AEAAKNALNGIRFDPESPQTLRLEFAKANTKMAKSKLMAT 109
>gi|413942879|gb|AFW75528.1| hypothetical protein ZEAMMB73_795624, partial [Zea mays]
Length = 210
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 10/202 (4%)
Query: 107 LQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQ-SKRLRTGGDYTHTGYSAPSPF 165
Q IFD E+ LH E+AK RG V D+ + + D+ + G
Sbjct: 1 FQGTIFDPESGDRLHIELAKSTSRRPRGGVEGYRVIDKRANKTEGNADHENVGDEDDDEV 60
Query: 166 HAPPAPVWGPHGYMAPPPPPY-----DPYGGYGVPPVQMPAPAPVP----APSSYVPVQN 216
+ P +P +P Q P + S+ ++
Sbjct: 61 WGEDEDGGNDNNGDGGSDEPSGTENENPSDKNELPTDQSDQPGHKQQNGQSLSNEGRDKS 120
Query: 217 TKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASS 276
+ D PPC+T+FI NLG + E+EL+ + S +PGF +K+ R+ V F +F D+ S+++
Sbjct: 121 SSDIPPCSTIFIANLGHTCTEDELKEVLSKEPGFHVLKMRRRGGMPVAFADFTDIESSTA 180
Query: 277 VHHNLQGAVIPSSGSVGMRIQY 298
+ LQG V+ SS + G+ I+Y
Sbjct: 181 AMNRLQGTVLASSDNDGLHIEY 202
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
TIFI L E EL+ +L PG+ ++ +G P+ FA F+ + + AA + LQ
Sbjct: 129 TIFIANLGHTCTEDELKEVLSKEPGFHVLKMRRRGGMPVAFADFTDIESSTAAMNRLQGT 188
Query: 111 IFDAETKSVLHTEMAKKNL 129
+ + LH E A+ +
Sbjct: 189 VLASSDNDGLHIEYARSKM 207
>gi|291386104|ref|XP_002709596.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Oryctolagus cuniculus]
Length = 219
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 77
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
K+AL + FD E L E AK N + + + T
Sbjct: 78 KNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 113
>gi|390473655|ref|XP_002756964.2| PREDICTED: RNA-binding protein with multiple splicing [Callithrix
jacchus]
Length = 219
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 77
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
K+AL + FD E L E AK N + + + T
Sbjct: 78 KNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 113
>gi|348553686|ref|XP_003462657.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Cavia porcellus]
Length = 219
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 77
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
K+AL + FD E L E AK N + + + T
Sbjct: 78 KNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 113
>gi|57164973|ref|NP_001008712.1| RNA-binding protein with multiple splicing isoform C [Homo sapiens]
gi|332825789|ref|XP_001167950.2| PREDICTED: RNA-binding protein with multiple splicing [Pan
troglodytes]
gi|345781578|ref|XP_532815.3| PREDICTED: RNA-binding protein with multiple splicing [Canis lupus
familiaris]
gi|395739552|ref|XP_002819013.2| PREDICTED: RNA-binding protein with multiple splicing [Pongo
abelii]
gi|1669551|dbj|BAA12227.1| RBP-MS/type 3 [Homo sapiens]
gi|13177644|gb|AAH03608.1| RNA binding protein with multiple splicing [Homo sapiens]
gi|119583866|gb|EAW63462.1| hCG2043421, isoform CRA_d [Homo sapiens]
gi|261858762|dbj|BAI45903.1| RNA binding protein with multiple splicing [synthetic construct]
gi|383415405|gb|AFH30916.1| RNA-binding protein with multiple splicing isoform C [Macaca
mulatta]
gi|387541276|gb|AFJ71265.1| RNA-binding protein with multiple splicing isoform C [Macaca
mulatta]
gi|410212518|gb|JAA03478.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410212522|gb|JAA03480.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410253368|gb|JAA14651.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410253372|gb|JAA14653.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410294224|gb|JAA25712.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410294228|gb|JAA25714.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410342391|gb|JAA40142.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410342395|gb|JAA40144.1| RNA binding protein with multiple splicing [Pan troglodytes]
Length = 219
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 77
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
K+AL + FD E L E AK N + + + T
Sbjct: 78 KNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 113
>gi|119479645|ref|XP_001259851.1| RNA binding protein [Neosartorya fischeri NRRL 181]
gi|119408005|gb|EAW17954.1| RNA binding protein [Neosartorya fischeri NRRL 181]
Length = 616
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 21/127 (16%)
Query: 172 VWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNL 231
+ G HGY PYG P +PA P NPPCNTL++GNL
Sbjct: 376 MMGGHGY---------PYGSQHTPRHSLPAANP------------NDLNPPCNTLYVGNL 414
Query: 232 GESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGS 291
+EEEL+ LFS Q G+K++ ++ +CF+EF++V AS + L G + +S
Sbjct: 415 PPDTSEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFDEVAMASKALNELYGYKLSNSNK 474
Query: 292 VGMRIQY 298
G+R+ +
Sbjct: 475 TGIRLSF 481
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 37/94 (39%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+++ LP D E EL+ L GY+ K PM F F +A A + L
Sbjct: 408 TLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFDEVAMASKALNELYGY 467
Query: 111 IFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQ 144
K+ + +K L V+ G NA +
Sbjct: 468 KLSNSNKTGIRLSFSKNPLGVRSGQPGSMNASNH 501
>gi|403294314|ref|XP_003938139.1| PREDICTED: RNA-binding protein with multiple splicing [Saimiri
boliviensis boliviensis]
Length = 219
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 77
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
K+AL + FD E L E AK N + + + T
Sbjct: 78 KNALNGIRFDPEIPQTLRLEFAKANTKMAKSKLVGT 113
>gi|344281670|ref|XP_003412601.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Loxodonta africana]
Length = 219
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 77
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
K+AL + FD E L E AK N + + + T
Sbjct: 78 KNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 113
>gi|395850274|ref|XP_003797719.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Otolemur garnettii]
Length = 242
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 77
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
K+AL + FD E L E AK N + + + T
Sbjct: 78 KNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 113
>gi|57164971|ref|NP_001008711.1| RNA-binding protein with multiple splicing isoform B [Homo sapiens]
gi|1669549|dbj|BAA12226.1| RBP-MS/type 2 [Homo sapiens]
gi|119583858|gb|EAW63454.1| hCG14793, isoform CRA_c [Homo sapiens]
Length = 204
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 77
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
K+AL + FD E L E AK N + + + T
Sbjct: 78 KNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 113
>gi|400600735|gb|EJP68403.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 933
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
++ PV NPPCNTL++GNL +EEEL+ +F Q G+K++ ++ +CF+EFE
Sbjct: 729 NFPPVNPADQNPPCNTLYVGNLPIDTSEEELKAVFCKQRGYKRLCFRTKQNGPMCFVEFE 788
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
D+ A+ H+L G + +S G+R+ +
Sbjct: 789 DITFATKALHDLYGTPLHNSTKGGIRLSF 817
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 43/123 (34%), Gaps = 3/123 (2%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+++ LP D E EL+ + GY+ K PM F F A A L
Sbjct: 744 TLYVGNLPIDTSEEELKAVFCKQRGYKRLCFRTKQNGPMCFVEFEDITFATKALHDLYGT 803
Query: 111 IFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSP---FHA 167
TK + +K L V+ G V A Q GYSA P A
Sbjct: 804 PLHNSTKGGIRLSFSKNPLGVRSGQVPTQPASMQMPNANGMSSGPANGYSASGPPPGLSA 863
Query: 168 PPA 170
PP
Sbjct: 864 PPG 866
>gi|402877940|ref|XP_003902666.1| PREDICTED: RNA-binding protein with multiple splicing, partial
[Papio anubis]
Length = 268
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 55/103 (53%)
Query: 37 PYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFST 96
P + R+ VRT+F++GLP D+K REL L R GYE S + ++P+GF F +
Sbjct: 60 PAVRSPRVLRATVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDS 119
Query: 97 AQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
A AAK+AL + FD E L E AK N + + + T
Sbjct: 120 RSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 162
>gi|67901426|ref|XP_680969.1| hypothetical protein AN7700.2 [Aspergillus nidulans FGSC A4]
gi|40742696|gb|EAA61886.1| hypothetical protein AN7700.2 [Aspergillus nidulans FGSC A4]
gi|259484045|tpe|CBF79932.1| TPA: RNA binding protein (AFU_orthologue; AFUA_5G08330)
[Aspergillus nidulans FGSC A4]
Length = 628
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 213 PVQNTKD-NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDV 271
P N D NPPCNTL++GNL EEEL+ LFS Q G+K++ ++ +CF+EFEDV
Sbjct: 401 PAANPNDMNPPCNTLYVGNLPPDTQEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFEDV 460
Query: 272 NSASSVHHNLQGAVIPSSGSVGMRIQY 298
+A + L G + +S G+R+ +
Sbjct: 461 RTAGKTLNELYGYKLSNSIKTGIRLSF 487
>gi|332240824|ref|XP_003269587.1| PREDICTED: RNA-binding protein with multiple splicing [Nomascus
leucogenys]
Length = 219
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 77
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
K+AL + FD E L E AK N + + + T
Sbjct: 78 KNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 113
>gi|395541849|ref|XP_003772849.1| PREDICTED: RNA-binding protein with multiple splicing [Sarcophilus
harrisii]
Length = 188
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 54/95 (56%)
Query: 45 AHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAK 104
A D+VRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AAK
Sbjct: 11 AVDDVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAAK 70
Query: 105 DALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
+AL + FD E L E AK N + + + T
Sbjct: 71 NALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 105
>gi|432851215|ref|XP_004066912.1| PREDICTED: RNA-binding protein with multiple splicing-like [Oryzias
latipes]
Length = 264
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 52/89 (58%)
Query: 40 NTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQL 99
N N +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F +
Sbjct: 75 NNNVSIEEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDSRSG 134
Query: 100 AVAAKDALQEMIFDAETKSVLHTEMAKKN 128
A AAK+AL + FD E+ L E AK N
Sbjct: 135 AEAAKNALNGIRFDPESPQTLRLEFAKAN 163
>gi|70998148|ref|XP_753803.1| RNA binding protein [Aspergillus fumigatus Af293]
gi|66851439|gb|EAL91765.1| RNA binding protein [Aspergillus fumigatus Af293]
gi|159126462|gb|EDP51578.1| RNA binding protein [Aspergillus fumigatus A1163]
Length = 616
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 21/127 (16%)
Query: 172 VWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNL 231
+ G HGY PYG P +PA P NPPCNTL++GNL
Sbjct: 376 MMGGHGY---------PYGSQHTPRHSLPAANP------------NDLNPPCNTLYVGNL 414
Query: 232 GESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGS 291
+EEEL+ LFS Q G+K++ ++ +CF+EF++V AS + L G + +S
Sbjct: 415 PPDTSEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFDEVAMASKALNELYGYKLSNSTK 474
Query: 292 VGMRIQY 298
G+R+ +
Sbjct: 475 TGIRLSF 481
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 38/94 (40%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+++ LP D E EL+ L GY+ K PM F F +A A + L
Sbjct: 408 TLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFDEVAMASKALNELYGY 467
Query: 111 IFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQ 144
TK+ + +K L V+ G NA +
Sbjct: 468 KLSNSTKTGIRLSFSKNPLGVRSGQPGSMNASNH 501
>gi|348553688|ref|XP_003462658.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Cavia porcellus]
Length = 196
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 77
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
K+AL + FD E L E AK N + + + T
Sbjct: 78 KNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 113
>gi|5803141|ref|NP_006858.1| RNA-binding protein with multiple splicing isoform A [Homo sapiens]
gi|57164969|ref|NP_001008710.1| RNA-binding protein with multiple splicing isoform A [Homo sapiens]
gi|291386102|ref|XP_002709595.1| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Oryctolagus cuniculus]
gi|395850272|ref|XP_003797718.1| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Otolemur garnettii]
gi|13124469|sp|Q93062.1|RBPMS_HUMAN RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|1669547|dbj|BAA12225.1| RBP-MS/type 1 [Homo sapiens]
gi|1669553|dbj|BAA12228.1| RBP-MS/type 4 [Homo sapiens]
gi|119583855|gb|EAW63451.1| hCG14793, isoform CRA_a [Homo sapiens]
gi|119583857|gb|EAW63453.1| hCG14793, isoform CRA_a [Homo sapiens]
gi|383415403|gb|AFH30915.1| RNA-binding protein with multiple splicing isoform A [Macaca
mulatta]
gi|410212520|gb|JAA03479.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410253370|gb|JAA14652.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410294226|gb|JAA25713.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410342393|gb|JAA40143.1| RNA binding protein with multiple splicing [Pan troglodytes]
Length = 196
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 77
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
K+AL + FD E L E AK N + + + T
Sbjct: 78 KNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 113
>gi|440634774|gb|ELR04693.1| hypothetical protein GMDG_01551 [Geomyces destructans 20631-21]
Length = 577
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 56/89 (62%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
S+ PV NPPCNTL++GNL +E+EL+ +FS Q G+K++ ++ +CF+EFE
Sbjct: 366 SFPPVNPADQNPPCNTLYVGNLPIDTSEDELKAMFSKQRGYKRLCFRTKQNGPMCFVEFE 425
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
DV+ A+ H L G + +S G+R+ +
Sbjct: 426 DVSFATKALHELYGHPLHNSVKGGIRLSF 454
>gi|224049139|ref|XP_002196184.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Taeniopygia guttata]
Length = 195
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 17 LPEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 76
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
K+AL + FD E L E AK N + + + T
Sbjct: 77 KNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 112
>gi|344281668|ref|XP_003412600.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Loxodonta africana]
Length = 196
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 77
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
K+AL + FD E L E AK N + + + T
Sbjct: 78 KNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 113
>gi|111185959|ref|NP_001036140.1| RNA-binding protein with multiple splicing isoform 3 [Mus musculus]
gi|403420640|ref|NP_001258173.1| RNA-binding protein with multiple splicing [Rattus norvegicus]
gi|12848898|dbj|BAB28128.1| unnamed protein product [Mus musculus]
gi|12849426|dbj|BAB28336.1| unnamed protein product [Mus musculus]
Length = 220
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 77
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
K+AL + FD E L E AK N + + + T
Sbjct: 78 KNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 113
>gi|119583863|gb|EAW63459.1| hCG2043421, isoform CRA_b [Homo sapiens]
gi|119583865|gb|EAW63461.1| hCG2043421, isoform CRA_b [Homo sapiens]
Length = 179
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 77
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
K+AL + FD E L E AK N + + + T
Sbjct: 78 KNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 113
>gi|119583864|gb|EAW63460.1| hCG2043421, isoform CRA_c [Homo sapiens]
gi|194389216|dbj|BAG65596.1| unnamed protein product [Homo sapiens]
Length = 224
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 77
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
K+AL + FD E L E AK N + + + T
Sbjct: 78 KNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 113
>gi|296816757|ref|XP_002848715.1| RNA binding protein [Arthroderma otae CBS 113480]
gi|238839168|gb|EEQ28830.1| RNA binding protein [Arthroderma otae CBS 113480]
Length = 621
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y PV NPPCNTL++GNL +E+EL+ LFS Q G+K+M ++ +CF+EFE
Sbjct: 385 NYPPVNPADQNPPCNTLYVGNLPPDTSEDELKALFSRQRGYKRMIFRQKPNGPICFVEFE 444
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
DV+ A+ L G + +S G+R+ +
Sbjct: 445 DVSFATKCLTELYGYELSNSVKGGIRLSF 473
>gi|346977589|gb|EGY21041.1| RNA binding protein [Verticillium dahliae VdLs.17]
Length = 508
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 56/90 (62%)
Query: 209 SSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEF 268
S++ PV NPPCNTL++GNL +EEEL+ +FS Q G+K++ ++ +CF+EF
Sbjct: 309 SNFPPVNPADQNPPCNTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNGPMCFVEF 368
Query: 269 EDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
EDV A+ + L G + +S G+R+ +
Sbjct: 369 EDVTFATKALNELYGQPLHNSVKGGIRLSF 398
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 32/84 (38%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+++ LP D E EL+ + GY+ K PM F F A A + L
Sbjct: 325 TLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNGPMCFVEFEDVTFATKALNELYGQ 384
Query: 111 IFDAETKSVLHTEMAKKNLFVKRG 134
K + +K L V+ G
Sbjct: 385 PLHNSVKGGIRLSFSKNPLGVRSG 408
>gi|297299182|ref|XP_002805345.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Macaca mulatta]
gi|297299184|ref|XP_001083170.2| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Macaca mulatta]
Length = 224
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 77
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
K+AL + FD E L E AK N + + + T
Sbjct: 78 KNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 113
>gi|452984744|gb|EME84501.1| hypothetical protein MYCFIDRAFT_182368 [Pseudocercospora fijiensis
CIRAD86]
Length = 479
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 55/88 (62%)
Query: 211 YVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFED 270
Y PV NPPCNTL++GNL +E+EL+ LFS Q G+K++ ++ +CF+EFED
Sbjct: 273 YPPVNPADQNPPCNTLYVGNLPIDTSEDELKSLFSKQRGYKRLCFRTKQNGPMCFVEFED 332
Query: 271 VNSASSVHHNLQGAVIPSSGSVGMRIQY 298
++ A+ H L G + +S G+R+ +
Sbjct: 333 ISFATKALHELYGHPLHNSVKGGIRLSF 360
>gi|26347873|dbj|BAC37585.1| unnamed protein product [Mus musculus]
Length = 170
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 77
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
K+AL + FD E L E AK N + + + T
Sbjct: 78 KNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 113
>gi|147903173|ref|NP_001083477.1| RNA binding protein with multiple splicing [Xenopus laevis]
gi|38014401|gb|AAH60391.1| MGC68512 protein [Xenopus laevis]
Length = 200
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 37 PYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFST 96
P D N + +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F +
Sbjct: 11 PPDEIN-LPEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDS 69
Query: 97 AQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
A AAK+AL + FD E L E AK N + + + T
Sbjct: 70 RSEAEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAKSKLVGT 112
>gi|358393470|gb|EHK42871.1| hypothetical protein TRIATDRAFT_164924, partial [Trichoderma
atroviride IMI 206040]
Length = 446
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 56/90 (62%)
Query: 209 SSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEF 268
S++ PV NPPCNTL++GNL EEEL+ +F Q G+K++ + +CF+EF
Sbjct: 285 SNFPPVNPADQNPPCNTLYVGNLPVDTAEEELKAMFCKQRGYKRLCFRTKANGPMCFVEF 344
Query: 269 EDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
ED++ A+ + + GA++ +S G+R+ +
Sbjct: 345 EDISLATRALNEMYGALLHNSTKGGIRLSF 374
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 35/84 (41%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+++ LP D E EL+ + GY+ K PM F F LA A + +
Sbjct: 301 TLYVGNLPVDTAEEELKAMFCKQRGYKRLCFRTKANGPMCFVEFEDISLATRALNEMYGA 360
Query: 111 IFDAETKSVLHTEMAKKNLFVKRG 134
+ TK + +K L V+ G
Sbjct: 361 LLHNSTKGGIRLSFSKNPLGVRSG 384
>gi|260794824|ref|XP_002592407.1| hypothetical protein BRAFLDRAFT_118420 [Branchiostoma floridae]
gi|229277626|gb|EEN48418.1| hypothetical protein BRAFLDRAFT_118420 [Branchiostoma floridae]
Length = 1558
Score = 75.1 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 72/257 (28%), Positives = 95/257 (36%), Gaps = 81/257 (31%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDA 106
D VRT+F++GLP D K REL L R GYE S + ++P+GF F + A AAK A
Sbjct: 13 DSVRTLFVSGLPMDAKPRELYLLFRAYKGYEGSLLKVTTKQPVGFVTFESRAGAEAAKQA 72
Query: 107 LQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFH 166
LQ + FD + L E AK N V++ P
Sbjct: 73 LQGVRFDPDMPQTLRLEFAKANTKVQK----------------------------PKQNS 104
Query: 167 APPA---PVWGPHGYMAPPPPPYDPYGGY--GVPPVQMPAPAPVPAPSSYVPVQNTKDNP 221
P P GPH PY+ G + GVP P P S + + N +P
Sbjct: 105 TTPQVGIPAIGPHFARE----PYELGGAFFTGVPEAWAHHPFP---GFSRLRLNNKGGSP 157
Query: 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNL 281
C FIEF D+ A+ + L
Sbjct: 158 VC-----------------------------------------FIEFTDIPCATQAMNAL 176
Query: 282 QGAVIPSSGSVGMRIQY 298
QG V+ SS G+RI+Y
Sbjct: 177 QGYVLLSSDRGGLRIEY 193
>gi|451850380|gb|EMD63682.1| hypothetical protein COCSADRAFT_27011 [Cochliobolus sativus ND90Pr]
Length = 936
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y PV NPPCNTL++GNL +E+EL+ +FS Q G+K++ ++ +CF+EFE
Sbjct: 738 TYPPVNPADQNPPCNTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGPMCFVEFE 797
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
D + A+ + L G ++ +S G+R+ +
Sbjct: 798 DTSFATKALNELYGYMLHNSVKGGIRLSF 826
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 33/84 (39%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+++ LP D E EL+ + GY+ K PM F F A A + L
Sbjct: 753 TLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGPMCFVEFEDTSFATKALNELYGY 812
Query: 111 IFDAETKSVLHTEMAKKNLFVKRG 134
+ K + +K L V+ G
Sbjct: 813 MLHNSVKGGIRLSFSKNPLGVRSG 836
>gi|13124485|sp|Q9WVB0.1|RBPMS_MOUSE RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|5081739|gb|AAD39515.1|AF148511_1 hermes [Mus musculus]
Length = 197
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 77
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
K+AL + FD E L E AK N + + + T
Sbjct: 78 KNALNGIRFDPEIPQTLRIEFAKANTKMAKNKLVGT 113
>gi|242790607|ref|XP_002481586.1| RNA binding protein [Talaromyces stipitatus ATCC 10500]
gi|218718174|gb|EED17594.1| RNA binding protein [Talaromyces stipitatus ATCC 10500]
Length = 546
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 208 PSSYVPVQNTKD-NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFI 266
P +P N D NPPCNTL++GNL EEEL+ LFS Q G+K++ ++ +CF+
Sbjct: 323 PRHSLPAANPNDLNPPCNTLYVGNLPADTQEEELKALFSKQRGYKRLCFRNKQNGPMCFV 382
Query: 267 EFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
EF++V AS + L G + +S G+R+ +
Sbjct: 383 EFDEVAMASKALNELYGYKLSNSVKTGIRLSF 414
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 71/191 (37%), Gaps = 38/191 (19%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+++ LP D +E EL+ L GY+ K PM F F +A A + L
Sbjct: 341 TLYVGNLPADTQEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFDEVAMASKALNELYGY 400
Query: 111 IFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPA 170
K+ + +K L V+ G + + P+P +P
Sbjct: 401 KLSNSVKTGIRLSFSKNPLGVRSGQPGSS-------------------VNPPTPL-SPQT 440
Query: 171 PVWGPHGY---------MAPPPPPYDPYGGYGVPP-VQMPAPA---PVPAPSSYVPVQNT 217
P+ G G A PPP G PP + +P A P+P P+S+ P+ N
Sbjct: 441 PIHGGAGIGPLPNAMFSTASGPPP-----GLSAPPGLALPVGARNGPIPPPNSHAPMANG 495
Query: 218 KDNPPCNTLFI 228
P N L I
Sbjct: 496 NSFGPNNGLGI 506
>gi|342882619|gb|EGU83235.1| hypothetical protein FOXB_06235 [Fusarium oxysporum Fo5176]
Length = 454
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 193 GVPPVQMPAPAPVPAPSSYVPVQNTKD-NPPCNTLFIGNLGESINEEELRGLFSAQPGFK 251
G P AP P P NT D NPPCNTL++GNL EEEL+ LFS Q G+K
Sbjct: 265 GKGPFGYQAPNQSPFGRMNYPHANTADQNPPCNTLYVGNLPMDTAEEELKTLFSKQRGYK 324
Query: 252 QMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
++ + +CF+EFED+ AS L G ++ +S G+R+ +
Sbjct: 325 RLCFRTKGNGPMCFVEFEDIPFASKALTELYGKLLSNSNKGGIRLSF 371
>gi|396474256|ref|XP_003839528.1| similar to RNA binding protein [Leptosphaeria maculans JN3]
gi|312216097|emb|CBX96049.1| similar to RNA binding protein [Leptosphaeria maculans JN3]
Length = 572
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 57/89 (64%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y PV NPPCNTL++GNL +E+EL+ +FS Q G+K++ ++ +CF+EFE
Sbjct: 370 TYPPVNPADQNPPCNTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGPMCFVEFE 429
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
D + A+ ++L G ++ +S G+R+ +
Sbjct: 430 DTSFATKALNDLYGYMLHNSVKGGIRLSF 458
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 34/87 (39%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+++ LP D E EL+ + GY+ K PM F F A A + L
Sbjct: 385 TLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGPMCFVEFEDTSFATKALNDLYGY 444
Query: 111 IFDAETKSVLHTEMAKKNLFVKRGIVA 137
+ K + +K L V+ G A
Sbjct: 445 MLHNSVKGGIRLSFSKNPLGVRSGQSA 471
>gi|212534592|ref|XP_002147452.1| RNA binding protein [Talaromyces marneffei ATCC 18224]
gi|210069851|gb|EEA23941.1| RNA binding protein [Talaromyces marneffei ATCC 18224]
Length = 591
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 208 PSSYVPVQNTKD-NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFI 266
P +P N D NPPCNTL++GNL EEEL+ LFS Q G+K++ ++ +CF+
Sbjct: 368 PRHSLPAANPNDLNPPCNTLYVGNLPADTQEEELKALFSKQRGYKRLCFRNKQNGPMCFV 427
Query: 267 EFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
EF++V AS + L G + +S G+R+ +
Sbjct: 428 EFDEVAMASKALNELYGYKLSNSVKTGIRLSF 459
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 35/84 (41%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+++ LP D +E EL+ L GY+ K PM F F +A A + L
Sbjct: 386 TLYVGNLPADTQEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFDEVAMASKALNELYGY 445
Query: 111 IFDAETKSVLHTEMAKKNLFVKRG 134
K+ + +K L V+ G
Sbjct: 446 KLSNSVKTGIRLSFSKNPLGVRSG 469
>gi|326479306|gb|EGE03316.1| RNA binding protein [Trichophyton equinum CBS 127.97]
Length = 543
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y PV NPPCNTL++GNL +E+EL+ LFS Q G+K+M ++ +CF+EFE
Sbjct: 326 NYPPVNPADQNPPCNTLYVGNLPPDTSEDELKALFSRQRGYKRMIFRQKPNGPICFVEFE 385
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
DV+ A+ L G + +S G+R+ +
Sbjct: 386 DVSFATKCLTELYGYELSNSVKGGIRLSF 414
>gi|290651751|ref|NP_001166897.1| RNA binding protein with multiple splicing 2 [Rattus norvegicus]
gi|197246487|gb|AAI69038.1| Rbpms2 protein [Rattus norvegicus]
Length = 210
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKD 105
+EVRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+
Sbjct: 27 EEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQPVGFVIFDSRAGAEAAKN 86
Query: 106 ALQEMIFDAETKSVLHTEMAKKNL-FVKRGIVADTN 140
AL + FD E L E AK N K ++A N
Sbjct: 87 ALNGIRFDPENPQTLRLEFAKANTKMAKSKLIATPN 122
>gi|33342267|ref|NP_062707.1| RNA-binding protein with multiple splicing isoform 1 [Mus musculus]
gi|111185961|ref|NP_001036139.1| RNA-binding protein with multiple splicing isoform 2 [Mus musculus]
gi|20988889|gb|AAH30397.1| RNA binding protein gene with multiple splicing [Mus musculus]
gi|26334219|dbj|BAC30827.1| unnamed protein product [Mus musculus]
Length = 197
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 77
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
K+AL + FD E L E AK N + + + T
Sbjct: 78 KNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 113
>gi|307202627|gb|EFN81948.1| Protein couch potato [Harpegnathos saltator]
Length = 189
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 6/103 (5%)
Query: 199 MPAPA---PVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKV 255
+P+PA PV +PSS N N C+TLF+ NLG+ ++E EL+ +FS+ PGF ++++
Sbjct: 66 LPSPALASPVGSPSSQ---PNIAGNAQCSTLFVANLGQFVSEHELKDIFSSFPGFSRLRM 122
Query: 256 LRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+ V FIE++DV A+ LQG+ + SS +RI+Y
Sbjct: 123 HTKGGSPVAFIEYQDVRYAAQAMATLQGSFLLSSDRGAIRIEY 165
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 40/93 (43%)
Query: 37 PYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFST 96
P N + + T+F+ L V E EL+++ PG+ +++ KG P+ F +
Sbjct: 78 PSSQPNIAGNAQCSTLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTKGGSPVAFIEYQD 137
Query: 97 AQLAVAAKDALQEMIFDAETKSVLHTEMAKKNL 129
+ A A LQ + + + E AK +
Sbjct: 138 VRYAAQAMATLQGSFLLSSDRGAIRIEYAKSKM 170
>gi|293342475|ref|XP_001059526.2| PREDICTED: uncharacterized protein LOC498642 isoform 2 [Rattus
norvegicus]
Length = 197
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 77
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
K+AL + FD E L E AK N + + + T
Sbjct: 78 KNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 113
>gi|384498171|gb|EIE88662.1| hypothetical protein RO3G_13373 [Rhizopus delemar RA 99-880]
Length = 464
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 15/103 (14%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV----NYKGEKPM-----------GF 91
+++ TIF+ G P+D++ERE QN+ + G+EA+ + + GE+ M GF
Sbjct: 35 EDISTIFVVGFPEDMQEREFQNMFMFSSGFEAATLKVPSSKDGEEDMTSTSNIKKQIIGF 94
Query: 92 ALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRG 134
A F T + A+ AKD L DAE + L EMAKKNL K+
Sbjct: 95 AKFRTRKEAIEAKDTLNGRKIDAEKGNTLKAEMAKKNLHTKKA 137
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHH 279
NPPCNTL++GNL NEEEL+ +FS G+K++ + +CF+EFED A+
Sbjct: 376 NPPCNTLYVGNLPPDANEEELKSMFSKCAGYKRLSFRNKSNGPMCFVEFEDAIFAAQALQ 435
Query: 280 NLQGAVIPSSGSVGMRIQY 298
+L G + +S G+R+ +
Sbjct: 436 DLHGNPLSNSVKGGIRLSF 454
>gi|397521591|ref|XP_003830876.1| PREDICTED: RNA-binding protein with multiple splicing [Pan
paniscus]
Length = 218
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%)
Query: 40 NTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQL 99
N+ + VRT+F++GLP D+K REL L R GYE S + ++P+GF F +
Sbjct: 53 NSKDFSETFVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSE 112
Query: 100 AVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
A AAK+AL + FD E L E AK N + + + T
Sbjct: 113 AEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 152
>gi|378730449|gb|EHY56908.1| hypothetical protein HMPREF1120_04972 [Exophiala dermatitidis
NIH/UT8656]
Length = 501
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y P NPPCNTL++GNL +E+EL+ +FS Q G+K++ + +CF+EFE
Sbjct: 298 NYPPANPADQNPPCNTLYVGNLPMDTSEDELKAIFSKQRGYKRLCFRTKHNGPMCFVEFE 357
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
D++ A+ + L GA + +S G+R+ +
Sbjct: 358 DISFATKALNELYGAQLHNSVKGGIRLSF 386
>gi|327293680|ref|XP_003231536.1| RNA binding protein [Trichophyton rubrum CBS 118892]
gi|326466164|gb|EGD91617.1| RNA binding protein [Trichophyton rubrum CBS 118892]
Length = 556
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y PV NPPCNTL++GNL +E+EL+ LFS Q G+K+M ++ +CF+EFE
Sbjct: 315 NYPPVNPADQNPPCNTLYVGNLPPDTSEDELKALFSRQRGYKRMIFRQKPNGPICFVEFE 374
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
DV+ A+ L G + +S G+R+ +
Sbjct: 375 DVSFATKCLTELYGYELSNSVKGGIRLSF 403
>gi|31980694|ref|NP_082306.2| RNA-binding protein with multiple splicing 2 [Mus musculus]
gi|81915124|sp|Q8VC52.1|RBPS2_MOUSE RecName: Full=RNA-binding protein with multiple splicing 2
gi|18255713|gb|AAH21788.1| RNA binding protein with multiple splicing 2 [Mus musculus]
gi|74140118|dbj|BAE33785.1| unnamed protein product [Mus musculus]
gi|74194800|dbj|BAE25995.1| unnamed protein product [Mus musculus]
gi|148694156|gb|EDL26103.1| RNA binding protein with multiple splicing 2 [Mus musculus]
Length = 206
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKD 105
+EVRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+
Sbjct: 21 EEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQPVGFVIFDSRAGAEAAKN 80
Query: 106 ALQEMIFDAETKSVLHTEMAKKNL-FVKRGIVADTN 140
AL + FD E L E AK N K ++A N
Sbjct: 81 ALNGIRFDPENPQTLRLEFAKANTKMAKSKLIATPN 116
>gi|346326538|gb|EGX96134.1| RNA binding protein [Cordyceps militaris CM01]
Length = 444
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHH 279
NPPCNTL++GNL +EEEL+ +FS Q G+K++ + +CF+EFEDV+ A+ H
Sbjct: 272 NPPCNTLYVGNLPSDTSEEELKAMFSKQRGYKRLCFRTKSNGPMCFVEFEDVSFATKALH 331
Query: 280 NLQGAVIPSSGSVGMRIQY 298
L G + +S G+R+ +
Sbjct: 332 ELYGHPLHNSTKGGIRLSF 350
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 48/139 (34%), Gaps = 19/139 (13%)
Query: 2 AGAGIHTYHQQW---PPAPAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLP 58
AG G H + P + P PPPA A PP T+++ LP
Sbjct: 241 AGPGNSVTHMNFNHPPGSHHPRPPPANPADQNPP----------------CNTLYVGNLP 284
Query: 59 DDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKS 118
D E EL+ + GY+ K PM F F A A L TK
Sbjct: 285 SDTSEEELKAMFSKQRGYKRLCFRTKSNGPMCFVEFEDVSFATKALHELYGHPLHNSTKG 344
Query: 119 VLHTEMAKKNLFVKRGIVA 137
+ +K L V+ V+
Sbjct: 345 GIRLSFSKNPLGVRSSQVS 363
>gi|169613152|ref|XP_001799993.1| hypothetical protein SNOG_09707 [Phaeosphaeria nodorum SN15]
gi|111061852|gb|EAT82972.1| hypothetical protein SNOG_09707 [Phaeosphaeria nodorum SN15]
Length = 572
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y PV NPPCNTL++GNL +E+EL+ +FS Q G+K++ ++ +CF+EFE
Sbjct: 375 TYPPVNPADQNPPCNTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGPMCFVEFE 434
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
D + A+ + L G ++ +S G+R+ +
Sbjct: 435 DTSFATKALNELYGYMLHNSVKGGIRLSF 463
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 33/84 (39%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+++ LP D E EL+ + GY+ K PM F F A A + L
Sbjct: 390 TLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGPMCFVEFEDTSFATKALNELYGY 449
Query: 111 IFDAETKSVLHTEMAKKNLFVKRG 134
+ K + +K L V+ G
Sbjct: 450 MLHNSVKGGIRLSFSKNPLGVRSG 473
>gi|302420163|ref|XP_003007912.1| RNA binding protein [Verticillium albo-atrum VaMs.102]
gi|261353563|gb|EEY15991.1| RNA binding protein [Verticillium albo-atrum VaMs.102]
Length = 450
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 56/90 (62%)
Query: 209 SSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEF 268
S++ PV NPPCNTL++GNL +EEEL+ +FS Q G+K++ ++ +CF+EF
Sbjct: 251 SNFPPVNPADQNPPCNTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNGPMCFVEF 310
Query: 269 EDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
EDV A+ + L G + +S G+R+ +
Sbjct: 311 EDVTFATKALNELYGQPLHNSVKGGIRLSF 340
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 59/175 (33%), Gaps = 19/175 (10%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+++ LP D E EL+ + GY+ K PM F F A A + L
Sbjct: 267 TLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNGPMCFVEFEDVTFATKALNELYGQ 326
Query: 111 IFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSP-FHAPP 169
K + +K L V+ G + A + + G T + P P PP
Sbjct: 327 PLHNSVKGGIRLSFSKNPLGVRSGQTSGQGAANSMVAMMAGSPNGFTTANGPPPGLTVPP 386
Query: 170 ------------APVWGPHGYMAPPPPPYDPYGGY------GVPPVQMPAPAPVP 206
+ P G+ A ++P+ GY G P V M P
Sbjct: 387 GLSSGRYGGSSGGQSYTPAGFSANGTLSHNPWNGYSGPMASGGPNVNMGGNGSTP 441
>gi|223648622|gb|ACN11069.1| RNA-binding protein with multiple splicing [Salmo salar]
Length = 200
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 40 NTNRIA-HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQ 98
N N ++ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F
Sbjct: 10 NNNVVSLEEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDNRT 69
Query: 99 LAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
A AAK+AL + FD E+ L E AK N + + + T
Sbjct: 70 GAEAAKNALNGIRFDPESPQTLRLEFAKANTKMAKSKLMAT 110
>gi|302660324|ref|XP_003021842.1| RNA binding protein [Trichophyton verrucosum HKI 0517]
gi|291185760|gb|EFE41224.1| RNA binding protein [Trichophyton verrucosum HKI 0517]
Length = 654
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y PV NPPCNTL++GNL +E+EL+ LFS Q G+K+M ++ +CF+EFE
Sbjct: 413 NYPPVNPADQNPPCNTLYVGNLPPDTSEDELKALFSRQRGYKRMIFRQKPNGPICFVEFE 472
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
DV+ A+ L G + +S G+R+ +
Sbjct: 473 DVSFATKCLTELYGYELSNSVKGGIRLSF 501
>gi|238495454|ref|XP_002378963.1| RNA binding protein [Aspergillus flavus NRRL3357]
gi|317149634|ref|XP_001823556.2| RNA binding protein [Aspergillus oryzae RIB40]
gi|220695613|gb|EED51956.1| RNA binding protein [Aspergillus flavus NRRL3357]
gi|391872269|gb|EIT81403.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 614
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 207 APSSYVPVQNTKD-NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCF 265
P +P N D NPPCNTL++GNL +EEEL+ LF Q G+K++ ++ +CF
Sbjct: 387 TPRHSLPAANPNDMNPPCNTLYVGNLPPDASEEELKALFMKQRGYKRLCFRNKQNGPMCF 446
Query: 266 IEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+EFEDV +A + L G + +S G+R+ +
Sbjct: 447 VEFEDVGTAGKSLNELYGYKLSNSIKTGIRLSF 479
>gi|284795211|ref|NP_001165323.1| RNA binding protein with multiple splicing [Xenopus (Silurana)
tropicalis]
Length = 195
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKD 105
+EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AAK+
Sbjct: 19 EEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAAKN 78
Query: 106 ALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
AL + FD E L E AK N + + + T
Sbjct: 79 ALNGIRFDPEIPQTLRLEFAKANTKMAKSKLVGT 112
>gi|83772293|dbj|BAE62423.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 566
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 207 APSSYVPVQNTKD-NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCF 265
P +P N D NPPCNTL++GNL +EEEL+ LF Q G+K++ ++ +CF
Sbjct: 339 TPRHSLPAANPNDMNPPCNTLYVGNLPPDASEEELKALFMKQRGYKRLCFRNKQNGPMCF 398
Query: 266 IEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+EFEDV +A + L G + +S G+R+ +
Sbjct: 399 VEFEDVGTAGKSLNELYGYKLSNSIKTGIRLSF 431
>gi|410925168|ref|XP_003976053.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Takifugu rubripes]
Length = 194
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKD 105
+EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AAK+
Sbjct: 19 EEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAAKN 78
Query: 106 ALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
AL + FD E L E AK N + + + T
Sbjct: 79 ALNGVRFDPEIPQTLRLEFAKANTKMAKNKLVGT 112
>gi|302505920|ref|XP_003014917.1| RNA binding protein [Arthroderma benhamiae CBS 112371]
gi|291178488|gb|EFE34277.1| RNA binding protein [Arthroderma benhamiae CBS 112371]
Length = 655
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y PV NPPCNTL++GNL +E+EL+ LFS Q G+K+M ++ +CF+EFE
Sbjct: 414 NYPPVNPADQNPPCNTLYVGNLPPDTSEDELKALFSRQRGYKRMIFRQKPNGPICFVEFE 473
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
DV+ A+ L G + +S G+R+ +
Sbjct: 474 DVSFATKCLTELYGYELSNSVKGGIRLSF 502
>gi|189188620|ref|XP_001930649.1| RNA binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972255|gb|EDU39754.1| RNA binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 561
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y PV NPPCNTL++GNL +E+EL+ +FS Q G+K++ ++ +CF+EFE
Sbjct: 363 TYPPVNPADQNPPCNTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGPMCFVEFE 422
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
D + A+ + L G ++ +S G+R+ +
Sbjct: 423 DTSFATKALNELYGYMLHNSVKGGIRLSF 451
>gi|121713206|ref|XP_001274214.1| RNA binding protein [Aspergillus clavatus NRRL 1]
gi|119402367|gb|EAW12788.1| RNA binding protein [Aspergillus clavatus NRRL 1]
Length = 616
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 208 PSSYVPVQNTKD-NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFI 266
P +P N D NPPCNTL++GNL +EEEL+ LFS Q G+K++ ++ +CF+
Sbjct: 390 PRHSLPAANPNDLNPPCNTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGPMCFV 449
Query: 267 EFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
EF++V AS + L G + +S G+R+ +
Sbjct: 450 EFDEVAMASKALNELYGYKLSNSVKTGIRLSF 481
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 34/84 (40%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+++ LP D E EL+ L GY+ K PM F F +A A + L
Sbjct: 408 TLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFDEVAMASKALNELYGY 467
Query: 111 IFDAETKSVLHTEMAKKNLFVKRG 134
K+ + +K L V+ G
Sbjct: 468 KLSNSVKTGIRLSFSKNPLGVRSG 491
>gi|332235691|ref|XP_003267039.1| PREDICTED: RNA-binding protein with multiple splicing 2, partial
[Nomascus leucogenys]
Length = 214
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDA 106
+EVRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+A
Sbjct: 33 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQPVGFVIFDSRAGAEAAKNA 92
Query: 107 LQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
L + FD E L E AK N + + + T
Sbjct: 93 LNGIRFDPENPQTLRLEFAKANTKMAKSKLMAT 125
>gi|402874657|ref|XP_003901146.1| PREDICTED: uncharacterized protein LOC101014530 [Papio anubis]
Length = 427
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 48/83 (57%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKD 105
EVRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+
Sbjct: 245 KKEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQPVGFVIFDSRAGAEAAKN 304
Query: 106 ALQEMIFDAETKSVLHTEMAKKN 128
AL + FD E L E AK N
Sbjct: 305 ALNGIRFDPENPQTLRLEFAKAN 327
>gi|452000412|gb|EMD92873.1| hypothetical protein COCHEDRAFT_1223605 [Cochliobolus
heterostrophus C5]
Length = 561
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y PV NPPCNTL++GNL +E+EL+ +FS Q G+K++ ++ +CF+EFE
Sbjct: 363 TYPPVNPADQNPPCNTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGPMCFVEFE 422
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
D + A+ + L G ++ +S G+R+ +
Sbjct: 423 DTSFATKALNELYGYMLHNSVKGGIRLSF 451
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 33/84 (39%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+++ LP D E EL+ + GY+ K PM F F A A + L
Sbjct: 378 TLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGPMCFVEFEDTSFATKALNELYGY 437
Query: 111 IFDAETKSVLHTEMAKKNLFVKRG 134
+ K + +K L V+ G
Sbjct: 438 MLHNSVKGGIRLSFSKNPLGVRSG 461
>gi|126277363|ref|XP_001375205.1| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Monodelphis domestica]
Length = 257
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 49/82 (59%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDA 106
+EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AAK+A
Sbjct: 30 EEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDSRAGAEAAKNA 89
Query: 107 LQEMIFDAETKSVLHTEMAKKN 128
L + FD E L E AK N
Sbjct: 90 LNGIRFDPENPQTLRLEFAKAN 111
>gi|330917653|ref|XP_003297901.1| hypothetical protein PTT_08457 [Pyrenophora teres f. teres 0-1]
gi|311329202|gb|EFQ94032.1| hypothetical protein PTT_08457 [Pyrenophora teres f. teres 0-1]
Length = 559
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y PV NPPCNTL++GNL +E+EL+ +FS Q G+K++ ++ +CF+EFE
Sbjct: 361 TYPPVNPADQNPPCNTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNGPMCFVEFE 420
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
D + A+ + L G ++ +S G+R+ +
Sbjct: 421 DTSFATKALNELYGYMLHNSVKGGIRLSF 449
>gi|345795064|ref|XP_853385.2| PREDICTED: RNA-binding protein with multiple splicing 2 [Canis
lupus familiaris]
Length = 214
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKD 105
+EVRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+
Sbjct: 31 EEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQPVGFVIFDSRAGAEAAKN 90
Query: 106 ALQEMIFDAETKSVLHTEMAKKN 128
AL + FD E L E AK N
Sbjct: 91 ALNGIRFDPENPQTLRLEFAKAN 113
>gi|395822321|ref|XP_003784468.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Otolemur
garnettii]
Length = 211
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKD 105
+EVRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+
Sbjct: 29 EEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQPVGFVIFDSRAGAEAAKN 88
Query: 106 ALQEMIFDAETKSVLHTEMAKKNL-FVKRGIVADTN 140
AL + FD E L E AK N K ++A N
Sbjct: 89 ALNGIRFDPENPQTLRLEFAKANTKMAKSKLIATPN 124
>gi|148703478|gb|EDL35425.1| RNA binding protein gene with multiple splicing, isoform CRA_b [Mus
musculus]
Length = 227
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 53/100 (53%)
Query: 40 NTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQL 99
N R VRT+F++GLP D+K REL L R GYE S + ++P+GF F +
Sbjct: 21 NGKRCCVSMVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSE 80
Query: 100 AVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
A AAK+AL + FD E L E AK N + + + T
Sbjct: 81 AEAAKNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 120
>gi|425774296|gb|EKV12605.1| RNA binding protein [Penicillium digitatum Pd1]
gi|425776297|gb|EKV14519.1| RNA binding protein [Penicillium digitatum PHI26]
Length = 518
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 207 APSSYVPVQNTKD-NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCF 265
P +P N D NPPCNTL++GNL +EEEL+ LFS Q G+K++ ++ +CF
Sbjct: 290 TPRHSLPAANPNDLNPPCNTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGPMCF 349
Query: 266 IEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+EF++V AS + L G + +S G+R+ +
Sbjct: 350 VEFDEVAMASKALNELYGYKLSNSVKTGIRLSF 382
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 37/93 (39%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+++ LP D E EL+ L GY+ K PM F F +A A + L
Sbjct: 309 TLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFDEVAMASKALNELYGY 368
Query: 111 IFDAETKSVLHTEMAKKNLFVKRGIVADTNAYD 143
K+ + +K L V+ G N+ +
Sbjct: 369 KLSNSVKTGIRLSFSKNPLGVRSGQPGSMNSSN 401
>gi|361127106|gb|EHK99086.1| putative Cell wall integrity protein scw1 [Glarea lozoyensis 74030]
Length = 446
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
++ PV NPPCNTL++GNL +E+EL+ +FS Q G+K++ ++ +CF+EFE
Sbjct: 237 NFPPVNPADQNPPCNTLYVGNLPIDTSEDELKAMFSKQRGYKRLCFRTKQNGPMCFVEFE 296
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
DV+ A+ H L G + +S G+R+ +
Sbjct: 297 DVSFATKALHELYGHPLHNSIKGGIRLSF 325
>gi|255949550|ref|XP_002565542.1| Pc22g16260 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592559|emb|CAP98914.1| Pc22g16260 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 602
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 208 PSSYVPVQNTKD-NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFI 266
P +P N D NPPCNTL++GNL +EEEL+ LFS Q G+K++ ++ +CF+
Sbjct: 374 PRHSLPAANPNDLNPPCNTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGPMCFV 433
Query: 267 EFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
EF++V AS + L G + +S G+R+ +
Sbjct: 434 EFDEVAMASKALNELYGYKLSNSVKTGIRLSF 465
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 38/96 (39%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+++ LP D E EL+ L GY+ K PM F F +A A + L
Sbjct: 392 TLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGPMCFVEFDEVAMASKALNELYGY 451
Query: 111 IFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSK 146
K+ + +K L V+ G N+ + +
Sbjct: 452 KLSNSVKTGIRLSFSKNPLGVRSGQPGSMNSSNSAS 487
>gi|126330763|ref|XP_001372734.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Monodelphis domestica]
Length = 186
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
I +VRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 8 IGRLKVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 67
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
K+AL + FD E L E AK N + + + T
Sbjct: 68 KNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 103
>gi|387540910|gb|AFJ71082.1| RNA-binding protein with multiple splicing 2 [Macaca mulatta]
Length = 209
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKD 105
+EVRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+
Sbjct: 27 EEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQPVGFVIFDSRAGAEAAKN 86
Query: 106 ALQEMIFDAETKSVLHTEMAKKN 128
AL + FD E L E AK N
Sbjct: 87 ALNGIRFDPENPQTLRLEFAKAN 109
>gi|213513247|ref|NP_001133590.1| RNA-binding protein with multiple splicing [Salmo salar]
gi|209154600|gb|ACI33532.1| RNA-binding protein with multiple splicing [Salmo salar]
Length = 201
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 41 TNRIA-HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQL 99
TN ++ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F
Sbjct: 12 TNNVSIEEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDNRTG 71
Query: 100 AVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
A AAK+AL + FD E L E AK N + + + T
Sbjct: 72 AEAAKNALNGIRFDPECPQTLRLEFAKANTKMAKSKLMGT 111
>gi|348525747|ref|XP_003450383.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Oreochromis niloticus]
Length = 194
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKD 105
+EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AAK+
Sbjct: 19 EEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAAKN 78
Query: 106 ALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
AL + FD E L E AK N + + + T
Sbjct: 79 ALNGVRFDPEIPQTLRLEFAKANTKMAKNKLVGT 112
>gi|291402858|ref|XP_002718127.1| PREDICTED: RNA binding protein with multiple splicing 2
[Oryctolagus cuniculus]
Length = 210
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKD 105
+EVRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+
Sbjct: 27 EEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQPVGFVIFDSRAGAEAAKN 86
Query: 106 ALQEMIFDAETKSVLHTEMAKKN 128
AL + FD E L E AK N
Sbjct: 87 ALNGIRFDPENPQTLRLEFAKAN 109
>gi|281347421|gb|EFB23005.1| hypothetical protein PANDA_009679 [Ailuropoda melanoleuca]
gi|351701272|gb|EHB04191.1| RNA-binding protein with multiple splicing, partial [Heterocephalus
glaber]
gi|355697845|gb|EHH28393.1| hypothetical protein EGK_18822, partial [Macaca mulatta]
gi|355779616|gb|EHH64092.1| hypothetical protein EGM_17218, partial [Macaca fascicularis]
Length = 198
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDAL 107
+VRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AAK+AL
Sbjct: 1 QVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAAKNAL 60
Query: 108 QEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
+ FD E L E AK N + + + T
Sbjct: 61 NGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 92
>gi|258570691|ref|XP_002544149.1| predicted protein [Uncinocarpus reesii 1704]
gi|237904419|gb|EEP78820.1| predicted protein [Uncinocarpus reesii 1704]
Length = 603
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 55/89 (61%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y PV NPPCNTL++GNL +E+EL+ LFS Q G+K+M ++ +CF+EF+
Sbjct: 378 NYPPVNPADQNPPCNTLYVGNLPPDTSEDELKALFSKQRGYKRMIFRQKPNGPICFVEFD 437
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
D++ A+ L G + +S G+R+ +
Sbjct: 438 DISWATKSLKELYGYELSNSIKGGIRLSF 466
>gi|431902282|gb|ELK08783.1| RNA-binding protein with multiple splicing [Pteropus alecto]
Length = 275
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDAL 107
+VRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AAK+AL
Sbjct: 78 QVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAAKNAL 137
Query: 108 QEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
+ FD E L E AK N + + + T
Sbjct: 138 NGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 169
>gi|338717427|ref|XP_001496966.3| PREDICTED: RNA-binding protein with multiple splicing 2 [Equus
caballus]
Length = 287
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 50/91 (54%)
Query: 38 YDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTA 97
YD +VRT+F++GLP D+K REL L R GYE S + +P+GF +F +
Sbjct: 96 YDRVRTKDGIQVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQPVGFVIFDSR 155
Query: 98 QLAVAAKDALQEMIFDAETKSVLHTEMAKKN 128
A AAK+AL + FD E L E AK N
Sbjct: 156 AGAEAAKNALNGIRFDPENPQTLRLEFAKAN 186
>gi|114657607|ref|XP_001174270.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Pan
troglodytes]
Length = 209
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKD 105
+EVRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+
Sbjct: 27 EEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQPVGFVIFDSRAGAEAAKN 86
Query: 106 ALQEMIFDAETKSVLHTEMAKKN 128
AL + FD E L E AK N
Sbjct: 87 ALNGIRFDPENPQTLRLEFAKAN 109
>gi|34915990|ref|NP_919248.1| RNA-binding protein with multiple splicing 2 [Homo sapiens]
gi|74762401|sp|Q6ZRY4.1|RBPS2_HUMAN RecName: Full=RNA-binding protein with multiple splicing 2
gi|34485858|gb|AAQ73311.1| RNA-binding protein with multiple splicing 2 [Homo sapiens]
gi|34534977|dbj|BAC87172.1| unnamed protein product [Homo sapiens]
gi|119598099|gb|EAW77693.1| RNA binding protein with multiple splicing 2 [Homo sapiens]
gi|225000786|gb|AAI72373.1| RNA binding protein with multiple splicing 2 [synthetic construct]
gi|261861060|dbj|BAI47052.1| RNA binding protein with multiple splicing 2 [synthetic construct]
Length = 209
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKD 105
+EVRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+
Sbjct: 27 EEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQPVGFVIFDSRAGAEAAKN 86
Query: 106 ALQEMIFDAETKSVLHTEMAKKN 128
AL + FD E L E AK N
Sbjct: 87 ALNGIRFDPENPQTLRLEFAKAN 109
>gi|19075417|ref|NP_587917.1| RNA-binding protein Scw1 [Schizosaccharomyces pombe 972h-]
gi|26399672|sp|O74452.1|SCW1_SCHPO RecName: Full=Cell wall integrity protein scw1; AltName:
Full=Strong cell wall protein 1
gi|3560261|emb|CAA20746.1| RNA-binding protein Scw1 [Schizosaccharomyces pombe]
Length = 561
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 88/186 (47%), Gaps = 20/186 (10%)
Query: 120 LHTEMAKKNLFVKRGIVADT-NAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHG- 177
++T +A+ L ++G A T N+ QS R +SA S F P P
Sbjct: 328 INTNVARNYLSSEKGYSAHTQNSSAQSPHPRV--------FSANSAFSTTSPPPLTPSTS 379
Query: 178 ----YMAPPPPPYDPYGGYGVP-PVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLG 232
+ A P P+ Y + PA P ++ P NPPCNT+++GNL
Sbjct: 380 RDYPFSASTISPSTPFSAYSSSHGIHQRIPASTPTNTN--PAD---QNPPCNTIYVGNLP 434
Query: 233 ESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSV 292
S +EEEL+ LFS Q G+K++ + +CF+EFE++ A NLQG + SS
Sbjct: 435 PSTSEEELKVLFSTQVGYKRLCFRTKGNGPMCFVEFENIPYAMEALKNLQGVCLSSSIKG 494
Query: 293 GMRIQY 298
G+R+ +
Sbjct: 495 GIRLSF 500
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 12/132 (9%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
TI++ LP E EL+ L GY+ KG PM F F A+ A LQ +
Sbjct: 427 TIYVGNLPPSTSEEELKVLFSTQVGYKRLCFRTKGNGPMCFVEFENIPYAMEALKNLQGV 486
Query: 111 IFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTG--GDY------THTGYSAP 162
+ K + +K L V+ + N + L +G +Y HTG
Sbjct: 487 CLSSSIKGGIRLSFSKNPLGVRSSSSSHNNHNGNVRNLHSGSMNNYNTDSLLNHTG--GH 544
Query: 163 SPFHAPPAPVWG 174
+ HA P+ WG
Sbjct: 545 NEVHASPS--WG 554
>gi|12845642|dbj|BAB26834.1| unnamed protein product [Mus musculus]
Length = 168
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKD 105
+EVRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+
Sbjct: 21 EEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQPVGFVIFDSRAGAEAAKN 80
Query: 106 ALQEMIFDAETKSVLHTEMAKKNL-FVKRGIVADTN 140
AL + FD E L E AK N K ++A N
Sbjct: 81 ALNGIRFDPENPQTLRLEFAKANTKMAKSKLIATPN 116
>gi|119583862|gb|EAW63458.1| hCG2043421, isoform CRA_a [Homo sapiens]
Length = 200
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDAL 107
+VRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AAK+AL
Sbjct: 3 QVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAAKNAL 62
Query: 108 QEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
+ FD E L E AK N + + + T
Sbjct: 63 NGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 94
>gi|303320063|ref|XP_003070031.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109717|gb|EER27886.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 615
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 55/89 (61%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y PV NPPCNTL++GNL +E+EL+ LFS Q G+K+M ++ +CF+EF+
Sbjct: 389 NYPPVNPADQNPPCNTLYVGNLPPDTSEDELKALFSRQRGYKRMIFRQKPNGPICFVEFD 448
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
D++ A+ L G + +S G+R+ +
Sbjct: 449 DISWATKSLKELYGYELSNSIKGGIRLSF 477
>gi|119183856|ref|XP_001242909.1| hypothetical protein CIMG_06805 [Coccidioides immitis RS]
gi|392865813|gb|EAS31646.2| RNA binding protein [Coccidioides immitis RS]
Length = 615
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 55/89 (61%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y PV NPPCNTL++GNL +E+EL+ LFS Q G+K+M ++ +CF+EF+
Sbjct: 389 NYPPVNPADQNPPCNTLYVGNLPPDTSEDELKALFSRQRGYKRMIFRQKPNGPICFVEFD 448
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
D++ A+ L G + +S G+R+ +
Sbjct: 449 DISWATKSLKELYGYELSNSIKGGIRLSF 477
>gi|320031854|gb|EFW13811.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 615
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 55/89 (61%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y PV NPPCNTL++GNL +E+EL+ LFS Q G+K+M ++ +CF+EF+
Sbjct: 389 NYPPVNPADQNPPCNTLYVGNLPPDTSEDELKALFSRQRGYKRMIFRQKPNGPICFVEFD 448
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
D++ A+ L G + +S G+R+ +
Sbjct: 449 DISWATKSLKELYGYELSNSIKGGIRLSF 477
>gi|345562989|gb|EGX45995.1| hypothetical protein AOL_s00112g12 [Arthrobotrys oligospora ATCC
24927]
Length = 632
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 5/108 (4%)
Query: 196 PVQMPAPAPVPAP----SSYVPVQNTKD-NPPCNTLFIGNLGESINEEELRGLFSAQPGF 250
P+ +P A P +P N D NPPCNTL++GNL + +E+EL+ LFS Q G+
Sbjct: 385 PISIPMSATTATPMQPYQRVLPAANPADQNPPCNTLYVGNLPANTSEDELKALFSRQRGY 444
Query: 251 KQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
K++ + +CF+EFEDV A+ L G + +S G+R+ +
Sbjct: 445 KRLCFRTKANGPMCFVEFEDVAYATRALTELYGRGLSNSVKGGIRLSF 492
>gi|453085210|gb|EMF13253.1| hypothetical protein SEPMUDRAFT_148613 [Mycosphaerella populorum
SO2202]
Length = 568
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 55/88 (62%)
Query: 211 YVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFED 270
Y PV NPPCNTL++GNL +E+EL+ LFS G+K++ + + ++CF+EFED
Sbjct: 362 YPPVNPADQNPPCNTLYVGNLPVDTSEDELKALFSKVRGYKRLCFRTKHQGSMCFVEFED 421
Query: 271 VNSASSVHHNLQGAVIPSSGSVGMRIQY 298
V+ A+ + L G + +S G+R+ +
Sbjct: 422 VSFATKALNELYGIPLHNSTKGGIRLSF 449
>gi|358385005|gb|EHK22602.1| hypothetical protein TRIVIDRAFT_22864, partial [Trichoderma virens
Gv29-8]
Length = 437
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 54/90 (60%)
Query: 209 SSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEF 268
S++ PV NPPCNTL++GNL +EEEL+ LFS G+K++ ++ +CF+EF
Sbjct: 282 SNFPPVNPADQNPPCNTLYVGNLPIDTSEEELKALFSPVRGYKRLCFRTKQNGPMCFVEF 341
Query: 269 EDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
ED+ A+ L G + +S G+R+ +
Sbjct: 342 EDIGHATKALSQLYGWCLHNSVKGGIRLSF 371
>gi|154303210|ref|XP_001552013.1| hypothetical protein BC1G_09625 [Botryotinia fuckeliana B05.10]
Length = 266
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
++ PV NPPCNTL++GNL +E+EL+ +FS Q G+K++ ++ +CF+EFE
Sbjct: 56 NFPPVNPADQNPPCNTLYVGNLPIDTSEDELKSMFSKQRGYKRLCFRTKQNGPMCFVEFE 115
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
D + A+ H L G + +S G+R+ +
Sbjct: 116 DTSFATKALHELYGHPLHNSIKGGIRLSF 144
>gi|302921099|ref|XP_003053217.1| hypothetical protein NECHADRAFT_67581 [Nectria haematococca mpVI
77-13-4]
gi|256734157|gb|EEU47504.1| hypothetical protein NECHADRAFT_67581 [Nectria haematococca mpVI
77-13-4]
Length = 574
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 53/86 (61%)
Query: 213 PVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVN 272
PV NPPCNTL++GNL +EEEL+ LF Q G+K++ + +CF+EFE+V+
Sbjct: 281 PVNPADQNPPCNTLYVGNLPADTSEEELKALFIKQRGYKRLCFRTKANGPMCFVEFEEVS 340
Query: 273 SASSVHHNLQGAVIPSSGSVGMRIQY 298
A+ H+L G + +S G+R+ +
Sbjct: 341 FATKALHDLYGHPLHNSTKGGIRLSF 366
>gi|432919028|ref|XP_004079709.1| PREDICTED: RNA-binding protein with multiple splicing-like [Oryzias
latipes]
Length = 194
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKD 105
+EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AAK+
Sbjct: 19 EEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAAKN 78
Query: 106 ALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
AL + FD E L E AK N + + + T
Sbjct: 79 ALNGVRFDPEIPQTLRLEFAKANTKMAKNKLVGT 112
>gi|119583856|gb|EAW63452.1| hCG14793, isoform CRA_b [Homo sapiens]
Length = 143
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 77
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
K+AL + FD E L E AK N + + + T
Sbjct: 78 KNALNGIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 113
>gi|45382377|ref|NP_990200.1| RNA-binding protein with multiple splicing [Gallus gallus]
gi|13124483|sp|Q9W6I1.1|RBPMS_CHICK RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|4835860|gb|AAD30273.1|AF129933_1 RRM-type RNA-binding protein hermes [Gallus gallus]
Length = 200
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKD 105
+EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AAK+
Sbjct: 18 EEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDSRAGAEAAKN 77
Query: 106 ALQEMIFDAETKSVLHTEMAKKN 128
AL + FD E L E AK N
Sbjct: 78 ALNGIRFDPENPQTLRLEFAKAN 100
>gi|363733276|ref|XP_426296.3| PREDICTED: RNA-binding protein with multiple splicing [Gallus
gallus]
Length = 186
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDAL 107
+VRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AAK+AL
Sbjct: 12 KVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAAKNAL 71
Query: 108 QEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
+ FD E L E AK N + + + T
Sbjct: 72 NGIRFDPEIPQTLRLEFAKANTKMAKSKLVGT 103
>gi|426256354|ref|XP_004021805.1| PREDICTED: RNA-binding protein with multiple splicing [Ovis aries]
Length = 198
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 51/91 (56%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQ 108
VRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AAK+AL
Sbjct: 2 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAAKNALN 61
Query: 109 EMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
+ FD E L E AK N + + + T
Sbjct: 62 GIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 92
>gi|224062243|ref|XP_002193531.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Taeniopygia guttata]
Length = 167
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 48/81 (59%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDAL 107
EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AAK+AL
Sbjct: 2 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDSRAGAEAAKNAL 61
Query: 108 QEMIFDAETKSVLHTEMAKKN 128
+ FD E L E AK N
Sbjct: 62 NGIRFDPENPQTLRLEFAKAN 82
>gi|367043256|ref|XP_003652008.1| hypothetical protein THITE_2112877 [Thielavia terrestris NRRL 8126]
gi|346999270|gb|AEO65672.1| hypothetical protein THITE_2112877 [Thielavia terrestris NRRL 8126]
Length = 513
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y P NPPCNTL++GNL +EEEL+ +FS Q G+K++ + +CF+EFE
Sbjct: 318 NYPPANPADQNPPCNTLYVGNLPLDTSEEELKAMFSKQRGYKRLCFRTKANGPMCFVEFE 377
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
D++ A+ L G + +S G+R+ +
Sbjct: 378 DISFATKALKELYGQPLHNSVKGGIRLSF 406
>gi|326918450|ref|XP_003205501.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Meleagris gallopavo]
Length = 233
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDAL 107
+VRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AAK+AL
Sbjct: 59 QVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAAKNAL 118
Query: 108 QEMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
+ FD E L E AK N + + + T
Sbjct: 119 NGIRFDPEIPQTLRLEFAKANTKMAKSKLVGT 150
>gi|384497012|gb|EIE87503.1| hypothetical protein RO3G_12214 [Rhizopus delemar RA 99-880]
Length = 402
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 15/102 (14%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEA---------------SQVNYKGEKPMGF 91
+E+ TIF+ G P+D++ERE QN+ + G+EA S +N ++ +GF
Sbjct: 35 EEISTIFVVGFPEDMQEREFQNMFTFSSGFEAATLKVPSSKDGEEDISAINNIKKQIIGF 94
Query: 92 ALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
A F T + A AKD L D E + L EMAKKNL K+
Sbjct: 95 AKFRTRKEATEAKDILNGRKVDIEKGNTLKAEMAKKNLHTKK 136
>gi|347839385|emb|CCD53957.1| hypothetical protein [Botryotinia fuckeliana]
Length = 545
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 55/89 (61%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
++ PV NPPCNTL++GNL +E+EL+ +FS Q G+K++ ++ +CF+EFE
Sbjct: 335 NFPPVNPADQNPPCNTLYVGNLPIDTSEDELKSMFSKQRGYKRLCFRTKQNGPMCFVEFE 394
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
D + A+ H L G + +S G+R+ +
Sbjct: 395 DTSFATKALHELYGHPLHNSIKGGIRLSF 423
>gi|390468449|ref|XP_002753282.2| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Callithrix jacchus]
Length = 255
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDAL 107
+VRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+AL
Sbjct: 75 QVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQPVGFVIFDSRAGAEAAKNAL 134
Query: 108 QEMIFDAETKSVLHTEMAKKN 128
+ FD E L E AK N
Sbjct: 135 NGIRFDPENPQTLRLEFAKAN 155
>gi|440907032|gb|ELR57225.1| RNA-binding protein with multiple splicing 2, partial [Bos
grunniens mutus]
Length = 184
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDAL 107
+VRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+AL
Sbjct: 4 QVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQPVGFVIFDSRAGAEAAKNAL 63
Query: 108 QEMIFDAETKSVLHTEMAKKN 128
+ FD E L E AK N
Sbjct: 64 NGIRFDPENPQTLRLEFAKAN 84
>gi|281347320|gb|EFB22904.1| hypothetical protein PANDA_002166 [Ailuropoda melanoleuca]
Length = 163
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDAL 107
+VRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+AL
Sbjct: 1 QVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQPVGFVIFDSRAGAEAAKNAL 60
Query: 108 QEMIFDAETKSVLHTEMAKKN 128
+ FD E L E AK N
Sbjct: 61 NGIRFDPENPQTLRLEFAKAN 81
>gi|355778103|gb|EHH63139.1| RNA-binding protein with multiple splicing 2, partial [Macaca
fascicularis]
Length = 181
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDAL 107
+VRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+AL
Sbjct: 1 QVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQPVGFVIFDSRAGAEAAKNAL 60
Query: 108 QEMIFDAETKSVLHTEMAKKN 128
+ FD E L E AK N
Sbjct: 61 NGIRFDPENPQTLRLEFAKAN 81
>gi|301756893|ref|XP_002914317.1| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Ailuropoda melanoleuca]
Length = 296
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQ 108
VRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+AL
Sbjct: 116 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQPVGFVIFDSRAGAEAAKNALN 175
Query: 109 EMIFDAETKSVLHTEMAKKNL-FVKRGIVADTN 140
+ FD E L E AK N K ++A N
Sbjct: 176 GIRFDPENPQTLRLEFAKANTKMAKNKLMATPN 208
>gi|403300512|ref|XP_003940978.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Saimiri
boliviensis boliviensis]
Length = 238
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 48/81 (59%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDAL 107
EVRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+AL
Sbjct: 58 EVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQPVGFVIFDSRAGAEAAKNAL 117
Query: 108 QEMIFDAETKSVLHTEMAKKN 128
+ FD E L E AK N
Sbjct: 118 NGIRFDPENPQTLRLEFAKAN 138
>gi|348588625|ref|XP_003480065.1| PREDICTED: RNA-binding protein with multiple splicing 2-like [Cavia
porcellus]
Length = 295
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 45 AHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAK 104
A VRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AK
Sbjct: 114 ALGSVRTLFVSGLPMDIKPRELYLLFRPFKGYEGSLIKLTSRQPVGFVIFDSRAGAEVAK 173
Query: 105 DALQEMIFDAETKSVLHTEMAKKNL-FVKRGIVADTN 140
+AL + FD E L E AK N K ++A N
Sbjct: 174 NALNGIRFDPENPQTLRLEFAKANTKMAKSKLLATPN 210
>gi|355715882|gb|AES05433.1| RNA binding protein with multiple splicing [Mustela putorius furo]
Length = 173
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 51/91 (56%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQ 108
VRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AAK+AL
Sbjct: 1 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAAKNALN 60
Query: 109 EMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
+ FD E L E AK N + + + T
Sbjct: 61 GIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 91
>gi|171683983|ref|XP_001906933.1| hypothetical protein [Podospora anserina S mat+]
gi|170941952|emb|CAP67604.1| unnamed protein product [Podospora anserina S mat+]
Length = 570
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 11/122 (9%)
Query: 188 PYGGYG-------VPPVQMPAPAPVPAPSSY---VPVQNTKD-NPPCNTLFIGNLGESIN 236
P G YG + P M + P P Y +P N D NPPCNTL++GNL +
Sbjct: 326 PIGQYGNHQGFATMSPSMMTSVGGFPLPQQYRTHMPPANPADQNPPCNTLYVGNLPVDTS 385
Query: 237 EEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRI 296
EEEL+ LFS Q G+K++ ++ +CF+EFE++ A+ + L G + +S G+R+
Sbjct: 386 EEELKQLFSKQRGYKRLCFRTKQNGPMCFVEFENITFATKALNELYGFQLHNSVKGGIRL 445
Query: 297 QY 298
+
Sbjct: 446 SF 447
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 33/87 (37%)
Query: 50 RTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQE 109
T+++ LP D E EL+ L GY+ K PM F F A A + L
Sbjct: 373 NTLYVGNLPVDTSEEELKQLFSKQRGYKRLCFRTKQNGPMCFVEFENITFATKALNELYG 432
Query: 110 MIFDAETKSVLHTEMAKKNLFVKRGIV 136
K + +K L V+ G V
Sbjct: 433 FQLHNSVKGGIRLSFSKNPLGVRTGQV 459
>gi|194670736|ref|XP_596374.4| PREDICTED: RNA-binding protein with multiple splicing 2 [Bos
taurus]
gi|297479609|ref|XP_002690918.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Bos
taurus]
gi|296483268|tpg|DAA25383.1| TPA: RNA binding protein with multiple splicing 2-like [Bos taurus]
Length = 188
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +VRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AA
Sbjct: 4 LKKKKVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQPVGFVIFDSRAGAEAA 63
Query: 104 KDALQEMIFDAETKSVLHTEMAKKN 128
K+AL + FD E L E AK N
Sbjct: 64 KNALNGIRFDPENPQTLRLEFAKAN 88
>gi|148703479|gb|EDL35426.1| RNA binding protein gene with multiple splicing, isoform CRA_c [Mus
musculus]
Length = 198
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 51/91 (56%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQ 108
VRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AAK+AL
Sbjct: 1 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAAKNALN 60
Query: 109 EMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
+ FD E L E AK N + + + T
Sbjct: 61 GIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 91
>gi|336465288|gb|EGO53528.1| hypothetical protein NEUTE1DRAFT_92899 [Neurospora tetrasperma FGSC
2508]
gi|350295585|gb|EGZ76562.1| hypothetical protein NEUTE2DRAFT_98501 [Neurospora tetrasperma FGSC
2509]
Length = 530
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHH 279
NPPCNTL++GNL +EEEL+ +FS G+K++ + +CF+EFEDV+ A+ +
Sbjct: 343 NPPCNTLYVGNLPIDTSEEELKAVFSKVRGYKRLCYRTKHNGPMCFVEFEDVSFATKALN 402
Query: 280 NLQGAVIPSSGSVGMRIQY 298
L G + +S GMR+ +
Sbjct: 403 ELYGHTLSNSRKGGMRLSF 421
>gi|355692793|gb|EHH27396.1| RNA-binding protein with multiple splicing 2, partial [Macaca
mulatta]
Length = 181
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDAL 107
+VRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+AL
Sbjct: 1 QVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQPVGFVIFDSRAGAEAAKNAL 60
Query: 108 QEMIFDAETKSVLHTEMAKKN 128
+ FD E L E AK N
Sbjct: 61 NGIRFDPENPQTLRLEFAKAN 81
>gi|156845900|ref|XP_001645839.1| hypothetical protein Kpol_1054p28 [Vanderwaltozyma polyspora DSM
70294]
gi|156116508|gb|EDO17981.1| hypothetical protein Kpol_1054p28 [Vanderwaltozyma polyspora DSM
70294]
Length = 683
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 8/87 (9%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT-----VCFIEFEDVNSA 274
NPPCNTL++GNL E ELR LFS+QPGF+++ + + +CF+EFEDV+ A
Sbjct: 558 NPPCNTLYVGNLPSDATEHELRQLFSSQPGFRRLSFRNKNTNGNGHGPICFVEFEDVSFA 617
Query: 275 SSVHHNLQGAVIPS---SGSVGMRIQY 298
+ L G+ +PS S G+R+ +
Sbjct: 618 TRALAELYGSQLPSTNVSNKGGIRLSF 644
>gi|326669776|ref|XP_003199078.1| PREDICTED: RNA-binding protein with multiple splicing-like [Danio
rerio]
Length = 183
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDAL 107
+VRT+F++GLP D+K REL L R GYE S + + ++P+GF FS+ A AAK+ L
Sbjct: 19 QVRTLFVSGLPMDIKPRELYLLFRPFQGYEGSLIKFTSKQPVGFVSFSSRSEAEAAKNRL 78
Query: 108 QEMIFDAETKSVLHTEMAKKNLFVKR 133
+ FD + L E AK N + R
Sbjct: 79 NGVRFDPDVPQTLRLEFAKANTKMSR 104
>gi|85114567|ref|XP_964717.1| hypothetical protein NCU00556 [Neurospora crassa OR74A]
gi|28926509|gb|EAA35481.1| hypothetical protein NCU00556 [Neurospora crassa OR74A]
Length = 530
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHH 279
NPPCNTL++GNL +EEEL+ +FS G+K++ + +CF+EFEDV+ A+ +
Sbjct: 343 NPPCNTLYVGNLPIDTSEEELKAVFSKVRGYKRLCYRTKHNGPMCFVEFEDVSFATKALN 402
Query: 280 NLQGAVIPSSGSVGMRIQY 298
L G + +S GMR+ +
Sbjct: 403 ELYGHTLSNSRKGGMRLSF 421
>gi|336275323|ref|XP_003352414.1| hypothetical protein SMAC_01248 [Sordaria macrospora k-hell]
gi|380094302|emb|CCC07681.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 575
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHH 279
NPPCNTL++GNL +EEEL+ +FS G+K++ + +CF+EFEDV+ A+ +
Sbjct: 388 NPPCNTLYVGNLPIDTSEEELKAVFSKVRGYKRLCYRTKHNGPMCFVEFEDVSFATKALN 447
Query: 280 NLQGAVIPSSGSVGMRIQY 298
L G + +S GMR+ +
Sbjct: 448 ELYGHTLSNSRKGGMRLSF 466
Score = 37.4 bits (85), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 33/84 (39%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+++ LP D E EL+ + + GY+ K PM F F A A + L
Sbjct: 393 TLYVGNLPIDTSEEELKAVFSKVRGYKRLCYRTKHNGPMCFVEFEDVSFATKALNELYGH 452
Query: 111 IFDAETKSVLHTEMAKKNLFVKRG 134
K + +K L V+ G
Sbjct: 453 TLSNSRKGGMRLSFSKNPLGVRTG 476
>gi|407922123|gb|EKG15250.1| hypothetical protein MPH_07584 [Macrophomina phaseolina MS6]
Length = 589
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 55/89 (61%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
+Y PV NPPCNTL++GNL +E+EL+ +FS Q G+K++ + +CF+EFE
Sbjct: 386 NYPPVNPADQNPPCNTLYVGNLPIDTSEDELKAMFSKQRGYKRLCFRTKANGPMCFVEFE 445
Query: 270 DVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
DV+ A+ + L G + +S G+R+ +
Sbjct: 446 DVSFATKALNELYGHPLHNSVKGGIRLSF 474
>gi|351695575|gb|EHA98493.1| RNA-binding protein with multiple splicing 2, partial
[Heterocephalus glaber]
Length = 180
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDAL 107
+VRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+AL
Sbjct: 1 QVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQPVGFVIFDSRAGAEAAKNAL 60
Query: 108 QEMIFDAETKSVLHTEMAKKN 128
+ FD E L E AK N
Sbjct: 61 NGIRFDPENPQTLRLEFAKAN 81
>gi|432092246|gb|ELK24870.1| RNA-binding protein with multiple splicing 2 [Myotis davidii]
Length = 315
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 51/94 (54%)
Query: 35 PVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALF 94
PV D + VRT+F++GLP D+K REL L R GYE S + +P+GF +F
Sbjct: 11 PVSRDTSLAKFFVRVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQPVGFVIF 70
Query: 95 STAQLAVAAKDALQEMIFDAETKSVLHTEMAKKN 128
+ A AAK+AL + FD E L E AK N
Sbjct: 71 DSRAGAEAAKNALNGIRFDPENPQTLRLEFAKAN 104
>gi|344293499|ref|XP_003418460.1| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Loxodonta africana]
Length = 183
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 48/82 (58%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDA 106
+ VRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+A
Sbjct: 3 ERVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQPVGFVIFDSRAGAEAAKNA 62
Query: 107 LQEMIFDAETKSVLHTEMAKKN 128
L + FD E L E AK N
Sbjct: 63 LNGIRFDPENPQTLRLEFAKAN 84
>gi|354474967|ref|XP_003499701.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Cricetulus griseus]
Length = 181
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 51/91 (56%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQ 108
VRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AAK+AL
Sbjct: 7 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAAKNALN 66
Query: 109 EMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
+ FD E L E AK N + + + T
Sbjct: 67 GIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 97
>gi|148703476|gb|EDL35423.1| RNA binding protein gene with multiple splicing, isoform CRA_a [Mus
musculus]
gi|148703477|gb|EDL35424.1| RNA binding protein gene with multiple splicing, isoform CRA_a [Mus
musculus]
Length = 175
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 51/91 (56%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQ 108
VRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AAK+AL
Sbjct: 1 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAAKNALN 60
Query: 109 EMIFDAETKSVLHTEMAKKNLFVKRGIVADT 139
+ FD E L E AK N + + + T
Sbjct: 61 GIRFDPEIPQTLRLEFAKANTKMAKNKLVGT 91
>gi|431895918|gb|ELK05336.1| Ornithine decarboxylase antizyme 2, partial [Pteropus alecto]
Length = 320
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDAL 107
+VRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+AL
Sbjct: 2 QVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQPVGFVIFDSRAGAEAAKNAL 61
Query: 108 QEMIFDAETKSVLHTEMAKKN 128
+ FD E L E AK N
Sbjct: 62 NGIRFDPENPQTLRLEFAKAN 82
>gi|426379407|ref|XP_004056389.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Gorilla
gorilla gorilla]
Length = 214
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDAL 107
+VRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+AL
Sbjct: 34 QVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQPVGFVIFDSRAGAEAAKNAL 93
Query: 108 QEMIFDAETKSVLHTEMAKKN 128
+ FD E L E AK N
Sbjct: 94 NGIRFDPENPQTLRLEFAKAN 114
>gi|426234121|ref|XP_004011049.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Ovis
aries]
Length = 270
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQ 108
VRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+AL
Sbjct: 91 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQPVGFVIFDSRAGAEAAKNALN 150
Query: 109 EMIFDAETKSVLHTEMAKKN 128
+ FD E L E AK N
Sbjct: 151 GIRFDPENPQTLRLEFAKAN 170
>gi|452843907|gb|EME45842.1| hypothetical protein DOTSEDRAFT_71515 [Dothistroma septosporum
NZE10]
Length = 623
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 54/88 (61%)
Query: 211 YVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFED 270
Y PV NPPCNTL++GNL +E+EL+ LF Q G++++ ++ +CF+EFED
Sbjct: 373 YPPVNPADQNPPCNTLYVGNLPVDTSEDELKSLFMKQRGYRRLCFRTKQNGPMCFVEFED 432
Query: 271 VNSASSVHHNLQGAVIPSSGSVGMRIQY 298
++ A+ + L G + +S G+R+ +
Sbjct: 433 ISFATKALNELYGHPLHNSVKGGIRLSF 460
>gi|328768585|gb|EGF78631.1| hypothetical protein BATDEDRAFT_90384 [Batrachochytrium
dendrobatidis JAM81]
Length = 582
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%)
Query: 214 VQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNS 273
+ NPPCNTL++GNL EEELR +F+ Q GFK++ + +CF+EFE V+
Sbjct: 439 ISGMDQNPPCNTLYVGNLPHDALEEELRQIFTVQSGFKRLCFRTRANGPMCFVEFESVDY 498
Query: 274 ASSVHHNLQGAVIPSSGSVGMRIQY 298
A++ L G + +S G+R+ Y
Sbjct: 499 ATAALFQLYGNHLSNSTKGGIRLSY 523
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 12/95 (12%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEAS------------QVNYKGEKPMGFALF 94
+E+ TIF+ G P+D+ +RE QN+ + G+EA+ Q + +GFA F
Sbjct: 51 EEITTIFVVGFPEDMSDREFQNMFIFSTGFEAAALKVPMPGELDEQTGQLKRQIIGFAKF 110
Query: 95 STAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNL 129
T AV A+D L D + ++L E+AKKNL
Sbjct: 111 RTRSEAVKARDVLNGRRIDVDRGAILKAEIAKKNL 145
>gi|397515721|ref|XP_003828094.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Pan
paniscus]
Length = 230
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQ 108
VRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+AL
Sbjct: 51 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTARQPVGFVIFDSRAGAEAAKNALN 110
Query: 109 EMIFDAETKSVLHTEMAKKN 128
+ FD E L E AK N
Sbjct: 111 GIRFDPENPQTLRLEFAKAN 130
>gi|410961120|ref|XP_003987133.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Felis
catus]
Length = 204
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQ 108
VRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+AL
Sbjct: 24 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQPVGFVIFDSRAGAEAAKNALN 83
Query: 109 EMIFDAETKSVLHTEMAKKN 128
+ FD E L E AK N
Sbjct: 84 GIRFDPENPQTLRLEFAKAN 103
>gi|327285368|ref|XP_003227406.1| PREDICTED: RNA-binding protein with multiple splicing-like, partial
[Anolis carolinensis]
Length = 194
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQ 108
VRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AAK+AL
Sbjct: 1 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDSRSGAEAAKNALN 60
Query: 109 EMIFDAETKSVLHTEMAKKN 128
+ FD E L E AK N
Sbjct: 61 GIRFDPENPQTLRLEFAKAN 80
>gi|444730929|gb|ELW71298.1| RNA-binding protein with multiple splicing 2 [Tupaia chinensis]
Length = 240
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQ 108
VRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+AL
Sbjct: 25 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQPVGFVIFDSRAGAEAAKNALN 84
Query: 109 EMIFDAETKSVLHTEMAKKN 128
+ FD E L E AK N
Sbjct: 85 GIRFDPENPQTLRLEFAKAN 104
>gi|449273343|gb|EMC82847.1| RNA-binding protein with multiple splicing, partial [Columba livia]
Length = 180
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQ 108
VRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AAK+AL
Sbjct: 1 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDSRAGAEAAKNALN 60
Query: 109 EMIFDAETKSVLHTEMAKKN 128
+ FD E L E AK N
Sbjct: 61 GIRFDPENPQTLRLEFAKAN 80
>gi|395502670|ref|XP_003755700.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Sarcophilus harrisii]
Length = 207
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDAL 107
+VRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AAK+AL
Sbjct: 27 KVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDSRAGAEAAKNAL 86
Query: 108 QEMIFDAETKSVLHTEMAKKN 128
+ FD E L E AK N
Sbjct: 87 NGIRFDPENPQTLRLEFAKAN 107
>gi|326926326|ref|XP_003209353.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Meleagris gallopavo]
Length = 204
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDAL 107
+VRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AAK+AL
Sbjct: 24 KVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDSRAGAEAAKNAL 83
Query: 108 QEMIFDAETKSVLHTEMAKKN 128
+ FD E L E AK N
Sbjct: 84 NGIRFDPENPQTLRLEFAKAN 104
>gi|408388147|gb|EKJ67837.1| hypothetical protein FPSE_11985 [Fusarium pseudograminearum CS3096]
Length = 571
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 212 VPVQNTKD-NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFED 270
+P N D NPPCNTL++GNL +EEEL+ LFS G+K++ ++ +CF+EF+D
Sbjct: 375 IPAANPADQNPPCNTLYVGNLPGDASEEELKTLFSNARGYKRLCFRTKQNGPMCFVEFDD 434
Query: 271 VNSASSVHHNLQGAVIPSSGSVGMRIQY 298
V+ A+ + G + +S G+R+ +
Sbjct: 435 VSCATKALSDFYGTPLHNSTKGGIRLSF 462
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 31/84 (36%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+++ LP D E EL+ L GY+ K PM F F A A
Sbjct: 389 TLYVGNLPGDASEEELKTLFSNARGYKRLCFRTKQNGPMCFVEFDDVSCATKALSDFYGT 448
Query: 111 IFDAETKSVLHTEMAKKNLFVKRG 134
TK + +K L V+ G
Sbjct: 449 PLHNSTKGGIRLSFSKNPLGVRSG 472
>gi|354504963|ref|XP_003514542.1| PREDICTED: RNA-binding protein with multiple splicing 2-like,
partial [Cricetulus griseus]
Length = 181
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQ 108
VRT+F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+AL
Sbjct: 1 VRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQPVGFVIFDSRAGAEAAKNALN 60
Query: 109 EMIFDAETKSVLHTEMAKKNL-FVKRGIVADTN 140
+ FD + L E AK N K ++A N
Sbjct: 61 GIRFDPDNPQTLRLEFAKANTKMAKSKLIATPN 93
>gi|301619061|ref|XP_002938920.1| PREDICTED: hypothetical protein LOC100038109 [Xenopus (Silurana)
tropicalis]
Length = 198
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQ 108
VRT+F++GLP D+K REL L R GYE S + ++P+GF F A AAK+AL
Sbjct: 19 VRTLFVSGLPIDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDNRAGAEAAKNALN 78
Query: 109 EMIFDAETKSVLHTEMAKKNL-FVKRGIVADTN 140
+ FD E L E AK N K ++A N
Sbjct: 79 GIRFDPENPQTLRLEFAKANTKMAKNKLMATPN 111
>gi|148223487|ref|NP_001081864.1| RNA-binding protein with multiple splicing [Xenopus laevis]
gi|13124486|sp|Q9YGP5.1|RBPMS_XENLA RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|4324639|gb|AAD16971.1| RRM-type RNA-binding protein hermes [Xenopus laevis]
gi|66912013|gb|AAH97507.1| LOC398092 protein [Xenopus laevis]
Length = 196
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 46/80 (57%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQ 108
VRT+F++GLP D+K REL L R GYE S + ++P+GF F A AAK+AL
Sbjct: 19 VRTLFVSGLPIDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDNRAGAEAAKNALN 78
Query: 109 EMIFDAETKSVLHTEMAKKN 128
+ FD E L E AK N
Sbjct: 79 GIRFDPENPQTLRLEFAKAN 98
>gi|324509983|gb|ADY44181.1| Protein couch potato [Ascaris suum]
Length = 340
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 49/73 (67%)
Query: 226 LFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAV 285
LF+ NLG+S+NEEEL+ +F + PGF ++++ + +V F+E+ DV A+ +LQG
Sbjct: 258 LFVANLGQSVNEEELKQVFRSFPGFCRLRMHTKGGTSVAFVEYLDVRQATQAMTSLQGFQ 317
Query: 286 IPSSGSVGMRIQY 298
I SS GMRI+Y
Sbjct: 318 ISSSERGGMRIEY 330
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFALFSTAQLAVA 102
+VRT+F++GLP D K REL L R GYE+S + N K P+GF FST A
Sbjct: 29 QVRTLFVSGLPMDAKPRELYLLFRAYSGYESSLLKITSKNGKTASPVGFVTFSTKAEADE 88
Query: 103 AKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
A+ ALQ + FD + + E+A+ N V +
Sbjct: 89 ARKALQGVRFDPDNAQTIRLELARSNTKVSK 119
>gi|324504525|gb|ADY41956.1| Protein couch potato [Ascaris suum]
Length = 340
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 49/73 (67%)
Query: 226 LFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAV 285
LF+ NLG+S+NEEEL+ +F + PGF ++++ + +V F+E+ DV A+ +LQG
Sbjct: 258 LFVANLGQSVNEEELKQVFRSFPGFCRLRMHTKGGTSVAFVEYLDVRQATQAMTSLQGFQ 317
Query: 286 IPSSGSVGMRIQY 298
I SS GMRI+Y
Sbjct: 318 ISSSERGGMRIEY 330
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFALFSTAQLAVA 102
+VRT+F++GLP D K REL L R GYE+S + N K P+GF FST A
Sbjct: 29 QVRTLFVSGLPMDAKPRELYLLFRAYSGYESSLLKITSKNGKTASPVGFVTFSTKAEADE 88
Query: 103 AKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
A+ ALQ + FD + + E+A+ N V +
Sbjct: 89 ARKALQGVRFDPDNAQTIRLELARSNTKVSK 119
>gi|148222884|ref|NP_001087735.1| RNA binding protein with multiple splicing 2 [Xenopus laevis]
gi|51703926|gb|AAH81153.1| MGC84222 protein [Xenopus laevis]
Length = 197
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 46/80 (57%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQ 108
VRT+F++GLP D+K REL L R GYE S + ++P+GF F A AAK+AL
Sbjct: 19 VRTLFVSGLPIDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDNRAGAEAAKNALN 78
Query: 109 EMIFDAETKSVLHTEMAKKN 128
+ FD E L E AK N
Sbjct: 79 GIRFDPENPQTLRLEFAKAN 98
>gi|301619063|ref|XP_002938921.1| PREDICTED: hypothetical protein LOC100038109 [Xenopus (Silurana)
tropicalis]
Length = 199
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 46/80 (57%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQ 108
VRT+F++GLP D+K REL L R GYE S + ++P+GF F A AAK+AL
Sbjct: 19 VRTLFVSGLPIDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDNRAGAEAAKNALN 78
Query: 109 EMIFDAETKSVLHTEMAKKN 128
+ FD E L E AK N
Sbjct: 79 GIRFDPENPQTLRLEFAKAN 98
>gi|296411285|ref|XP_002835364.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629142|emb|CAZ79521.1| unnamed protein product [Tuber melanosporum]
Length = 598
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 194 VPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQM 253
V PV + +P A P NPPCNTL++GNL + E+EL+ LF Q G+K++
Sbjct: 347 VSPVTVASPNFGWAGRHLPPANPADQNPPCNTLYVGNLPANTTEDELKNLFCRQRGYKRL 406
Query: 254 KVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
++ +CF+EFED+ A+ L G + +S G+R+ +
Sbjct: 407 CFRAKQNGPMCFVEFEDIGMATKALTELYGRNLSTSVKGGIRLSF 451
>gi|50555840|ref|XP_505328.1| YALI0F12375p [Yarrowia lipolytica]
gi|49651198|emb|CAG78135.1| YALI0F12375p [Yarrowia lipolytica CLIB122]
Length = 625
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 49/86 (56%)
Query: 213 PVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVN 272
P NPPCNTL++GNL + EEEL LFS Q G+K++ + +CF+EFE+V
Sbjct: 503 PANPADQNPPCNTLYVGNLPMNTTEEELMQLFSKQKGYKRLCFRTKMNGPMCFVEFENVM 562
Query: 273 SASSVHHNLQGAVIPSSGSVGMRIQY 298
AS + L G + S G+R+ +
Sbjct: 563 YASKALNELYGKGLKYSVKGGIRLSF 588
>gi|388579466|gb|EIM19789.1| hypothetical protein WALSEDRAFT_61284 [Wallemia sebi CBS 633.66]
Length = 597
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Query: 220 NPPCNTLFIGNLGE-------SINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVN 272
NPPC+TL++GNL S+ E+ LR LFS Q GFK++ ++ +CF+EFEDV
Sbjct: 483 NPPCSTLYVGNLTTPPPSQPVSLLEDALRALFSKQGGFKRLSFRQKANGPMCFVEFEDVQ 542
Query: 273 SASSVHHNLQGAVIPSSGSVGMRIQY 298
A+ H+L G + G+R+ Y
Sbjct: 543 LATKTLHDLYGNTLNGLIRGGIRLSY 568
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 66/171 (38%), Gaps = 56/171 (32%)
Query: 32 PPPPVPYDNTNR-------IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEAS----- 79
PPPP+P N R D++ TIF+ G PDD+ ERE QN+ + +EA+
Sbjct: 88 PPPPLPISNVTRNNSFNNLAGSDDISTIFVVGFPDDMTEREFQNMFIFSSEFEAATLKIP 147
Query: 80 -----------------------------------QVNYK---------GEKPMGFALFS 95
VN ++ +GFA F
Sbjct: 148 AKEVLPPPHKDPYTLANIPATGIMSERENSSTIDESVNLNITAAQQLSARKQTIGFAKFR 207
Query: 96 TAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSK 146
T Q A+ AKD L D E SVL EMAKKNL + +T QS+
Sbjct: 208 TKQAALDAKDVLSGRKIDGERGSVLKAEMAKKNLHTRSKNAENTMQSSQSQ 258
>gi|50288343|ref|XP_446600.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525908|emb|CAG59527.1| unnamed protein product [Candida glabrata]
Length = 674
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 15/120 (12%)
Query: 189 YGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQP 248
Y G+ + A VP P++ P NPPCNTL++GNL +E+ELR LFS QP
Sbjct: 528 YSEKGMSQADLSLLAKVPPPAN--PAD---QNPPCNTLYVGNLPPDTSEQELRQLFSPQP 582
Query: 249 GFKQMKVLRQER--HT-----VCFIEFEDVNSASSVHHNLQGAVIPSSGSV---GMRIQY 298
GF+++ + HT +CF+EFEDV+ A+ L G +P +G+ G+R+ +
Sbjct: 583 GFRRLSFKNKNNNGHTHGHGPMCFVEFEDVSFATRALAELYGRQLPRTGANSKGGIRLSF 642
>gi|268564730|ref|XP_002639203.1| C. briggsae CBR-MEC-8 protein [Caenorhabditis briggsae]
Length = 305
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
Query: 30 PPPPPPVPYDNTNRIAHD-----EVRTIFITGLPDDVKERELQNLLRWLPGYEASQV--- 81
P P V ++ N ++ + +VRT+F++GLP D K REL L R GYE + +
Sbjct: 6 PNLAPAVSMESLNSVSSEATNPSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMT 65
Query: 82 --NYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
N K P+GF F T Q A A+ LQ + FD E VL E+AK N V R
Sbjct: 66 SKNGKPTSPVGFVTFLTQQDAQDARKMLQGVRFDPECAQVLRLELAKSNTKVSR 119
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%)
Query: 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQ 282
C+TLF+ NL +NE++LRG+F A GF ++++ + V F+E+ D+ A+ LQ
Sbjct: 220 CSTLFVANLSAEVNEDQLRGVFKAFTGFTRLRLHNKNGSCVAFVEYSDLQKATQAMLALQ 279
Query: 283 GAVIPSSGSVGMRIQY 298
G + ++ G+RI+Y
Sbjct: 280 GFQVSANDRGGLRIEY 295
>gi|341895190|gb|EGT51125.1| CBN-MEC-8 protein [Caenorhabditis brenneri]
gi|341898355|gb|EGT54290.1| hypothetical protein CAEBREN_29517 [Caenorhabditis brenneri]
Length = 313
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 20 PPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEAS 79
P P A+A + V + TN +VRT+F++GLP D K REL L R GYE +
Sbjct: 4 PKPNLASAVSMESLNSVSSEATN---PSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGA 60
Query: 80 QV-----NYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
+ N K P+GF F T Q A AK LQ + FD E VL E+AK N V R
Sbjct: 61 LLKMTSKNGKPTSPVGFVTFLTQQDAQDAKKLLQGVRFDPECAQVLRLELAKSNTKVAR 119
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%)
Query: 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQ 282
C+TLF+ NL +NE++LRG+F A GF ++++ + V F+E+ D+ A+ +LQ
Sbjct: 228 CSTLFVANLSAEVNEDQLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLQKATQAMMSLQ 287
Query: 283 GAVIPSSGSVGMRIQY 298
G + ++ G+RI+Y
Sbjct: 288 GFQVSANDRGGLRIEY 303
>gi|344229622|gb|EGV61507.1| hypothetical protein CANTEDRAFT_94398 [Candida tenuis ATCC 10573]
Length = 526
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 13/92 (14%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT---------VCFIEFED 270
NPPCNTL++GNL E+ELR LFS Q GF+++ + + +CF+EFED
Sbjct: 403 NPPCNTLYVGNLPPDATEQELRALFSPQKGFRRLSFRTKANASGSGSNNHGPMCFVEFED 462
Query: 271 VNSASSVHHNLQGAVIP----SSGSVGMRIQY 298
V A+ L G ++P S+G G+R+ +
Sbjct: 463 VAHATRALAELYGRILPRPSSSNGKGGIRLSF 494
>gi|443713681|gb|ELU06415.1| hypothetical protein CAPTEDRAFT_112394, partial [Capitella teleta]
Length = 347
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%)
Query: 217 TKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASS 276
T + PC+TLF+ NLG +E+EL+ LF + GF ++++ + V F+E++DV A
Sbjct: 213 TSTHAPCSTLFVANLGPFCSEQELKDLFQSISGFLRLRMHNKGGSPVAFVEYQDVRCAME 272
Query: 277 VHHNLQGAVIPSSGSVGMRIQY 298
LQG V+ SS G+RI+Y
Sbjct: 273 AMLKLQGCVLFSSERGGIRIEY 294
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGE-----KPMGFALFSTAQLAVA 102
+VRT+F++GLP D K REL L R GYE S + G+ P+GF F++ A A
Sbjct: 1 QVRTLFVSGLPMDAKPRELYLLFRAYKGYEGSLLKVTGKNGKTTSPVGFVTFTSRVAAEA 60
Query: 103 AKDALQEMI-FDAETKSVLHTEMAKKNLFVKR 133
AK LQ+ + FD + L E AK N V +
Sbjct: 61 AKQDLQQGVRFDPDLPQTLRLEFAKSNTKVTK 92
>gi|442619717|ref|NP_001262690.1| couch potato, isoform Q [Drosophila melanogaster]
gi|440217573|gb|AGB96070.1| couch potato, isoform Q [Drosophila melanogaster]
Length = 762
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Query: 39 DNTNRIAHDE-VRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFA 92
D+ N +++E VRT+F++GLP D K REL L R GYE S + N K P+GF
Sbjct: 430 DSVNTASNEEEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFV 489
Query: 93 LFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
F T A AAK LQ + FD + + E AK N V +
Sbjct: 490 TFHTRAGAEAAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSK 530
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLF 244
N PC+TLF+ NLG+ ++E EL+ +F
Sbjct: 710 NAPCSTLFVANLGQFVSEHELKEVF 734
>gi|442619711|ref|NP_732284.5| couch potato, isoform N [Drosophila melanogaster]
gi|442619725|ref|NP_732283.5| couch potato, isoform U [Drosophila melanogaster]
gi|442619729|ref|NP_001262691.1| couch potato, isoform W [Drosophila melanogaster]
gi|442619731|ref|NP_001262692.1| couch potato, isoform X [Drosophila melanogaster]
gi|442619733|ref|NP_524844.6| couch potato, isoform Y [Drosophila melanogaster]
gi|440217570|gb|AAF55484.6| couch potato, isoform N [Drosophila melanogaster]
gi|440217577|gb|AAF55485.6| couch potato, isoform U [Drosophila melanogaster]
gi|440217579|gb|AGB96071.1| couch potato, isoform W [Drosophila melanogaster]
gi|440217580|gb|AGB96072.1| couch potato, isoform X [Drosophila melanogaster]
gi|440217581|gb|AAN13754.5| couch potato, isoform Y [Drosophila melanogaster]
Length = 606
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Query: 39 DNTNRIAHDE-VRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFA 92
D+ N +++E VRT+F++GLP D K REL L R GYE S + N K P+GF
Sbjct: 430 DSVNTASNEEEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFV 489
Query: 93 LFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
F T A AAK LQ + FD + + E AK N V +
Sbjct: 490 TFHTRAGAEAAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSK 530
>gi|312371573|gb|EFR19722.1| hypothetical protein AND_21916 [Anopheles darlingi]
Length = 516
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 95/227 (41%), Gaps = 36/227 (15%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDAL 107
VRT+F++GLP D K REL L R GYE S + + K A
Sbjct: 40 SVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKN---------------GKTAS 84
Query: 108 QEMIFDAETKSVLHTEMAKKNLFVKRGI----VADTNAYDQSKRLRTGGDYTHTGYSAPS 163
Q + FD + + E AK N V + A T A+ T G SA +
Sbjct: 85 QGVRFDPDMPQTIRLEFAKSNTKVSKPKPQPNTAATAAHPALMHPLTAGPAAAELPSAAA 144
Query: 164 PFHA----PPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKD 219
HA P P P P P + +PA +P+P+ PV +T
Sbjct: 145 LQHATLVHPALHPQVPQQMQMPHPSAIHPASMH--VSAGLPANHFLPSPALASPVGSTAG 202
Query: 220 -----------NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKV 255
N PC+TLF+ NLG+ ++E EL+ +F++ PGF ++++
Sbjct: 203 GQQPPNPPLAANAPCSTLFVANLGQFVSEHELKEIFASLPGFCRLRL 249
>gi|17508419|ref|NP_492508.1| Protein MEC-8 [Caenorhabditis elegans]
gi|1369981|emb|CAA64867.1| mec-8 [Caenorhabditis elegans]
gi|3877217|emb|CAB03111.1| Protein MEC-8 [Caenorhabditis elegans]
Length = 312
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 20 PPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEAS 79
P P A+AA+ V + TN +VRT+F++GLP D K REL L R GYE +
Sbjct: 4 PKPNLASAASMESLNSVSSEATN---PSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGA 60
Query: 80 QV-----NYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
+ N K P+GF F + Q A A+ LQ + FD E VL E+AK N V R
Sbjct: 61 LLKMTSKNGKPTSPVGFVTFLSQQDAQDARKMLQGVRFDPECAQVLRLELAKSNTKVAR 119
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQ 282
C+TLF+ NL +NE+ LRG+F A GF ++++ + V F+E+ D+ A+ +LQ
Sbjct: 227 CSTLFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLQKATQAMISLQ 286
Query: 283 GAVIPSSGSVGMRIQY 298
G I ++ G+RI+Y
Sbjct: 287 GFQITANDRGGLRIEY 302
>gi|345314045|ref|XP_001507449.2| PREDICTED: RNA-binding protein with multiple splicing-like, partial
[Ornithorhynchus anatinus]
Length = 123
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 46/80 (57%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQ 108
VRT+F++GLP D+K REL L R GYE S + ++P+GF F A AAK+AL
Sbjct: 1 VRTLFVSGLPMDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDNRAGAEAAKNALN 60
Query: 109 EMIFDAETKSVLHTEMAKKN 128
+ FD E L E AK N
Sbjct: 61 GIRFDPENPQTLRLEFAKAN 80
>gi|1370048|emb|CAA64866.1| mec-8 [Caenorhabditis elegans]
Length = 312
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 20 PPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEAS 79
P P A+AA+ V + TN +VRT+F++GLP D K REL L R GYE +
Sbjct: 4 PKPNLASAASMESLNSVSSEATN---PSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGA 60
Query: 80 QV-----NYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
+ N K P+GF F + Q A A+ LQ + FD E VL E+AK N V R
Sbjct: 61 LLKMTSKNGKPTSPVGFVTFLSQQDAQDARKMLQGVRFDPECAQVLRLELAKSNTKVAR 119
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQ 282
C+TLF+ NL +NE+ LRG+F A GF ++++ + V F+E+ D+ A+ +LQ
Sbjct: 227 CSTLFVANLSAEVNEDTLRGVFKAFSGFTRLRLHNKNGSCVAFVEYSDLQKATQAMISLQ 286
Query: 283 GAVIPSSGSVGMRIQY 298
G I ++ G+RI+Y
Sbjct: 287 GFQITANDRGGLRIEY 302
>gi|1345457|emb|CAA78696.1| Cpo 61.1 [Drosophila melanogaster]
Length = 615
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Query: 39 DNTNRIAHDE-VRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFA 92
D+ N +++E VRT+F++GLP D K REL L R GYE S + N K P+GF
Sbjct: 439 DSVNTASNEEEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFV 498
Query: 93 LFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
F T A AAK LQ + FD + + E AK N V +
Sbjct: 499 TFHTRAGAEAAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSK 539
>gi|48429205|sp|Q01617.3|CPO_DROME RecName: Full=Protein couch potato
Length = 738
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFALFSTAQLAV 101
+EVRT+F++GLP D K REL L R GYE S + N K P+GF F T A
Sbjct: 448 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 507
Query: 102 AAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
AAK LQ + FD + + E AK N V +
Sbjct: 508 AAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSK 539
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQ 258
N PC+TLF+ NLG+ ++E EL+ +FS+ +K+L Q
Sbjct: 700 NAPCSTLFVANLGQFVSEHELKEVFSSHGNSNWLKLLHQ 738
>gi|254580201|ref|XP_002496086.1| ZYRO0C10164p [Zygosaccharomyces rouxii]
gi|238938977|emb|CAR27153.1| ZYRO0C10164p [Zygosaccharomyces rouxii]
Length = 745
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 8/87 (9%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT-----VCFIEFEDVNSA 274
NPPCNTL++GNL E+ELR LFS Q GF+++ + + +CF+EFEDV+ A
Sbjct: 613 NPPCNTLYVGNLPPDATEQELRQLFSGQQGFRRLSFRNKNSNGNGHGPMCFVEFEDVSFA 672
Query: 275 SSVHHNLQGAVIP---SSGSVGMRIQY 298
+ L G+ +P +S G+R+ +
Sbjct: 673 TRALAELYGSQLPRASASNKGGIRLSF 699
>gi|195348983|ref|XP_002041026.1| GM15269 [Drosophila sechellia]
gi|194122631|gb|EDW44674.1| GM15269 [Drosophila sechellia]
Length = 617
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Query: 39 DNTNRIAHDE-VRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFA 92
D+ N +++E VRT+F++GLP D K REL L R GYE S + N K P+GF
Sbjct: 441 DSVNTASNEEEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFV 500
Query: 93 LFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
F T A AAK LQ + FD + + E AK N V +
Sbjct: 501 TFHTRAGAEAAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSK 541
>gi|442619713|ref|NP_001262688.1| couch potato, isoform O [Drosophila melanogaster]
gi|440217571|gb|AGB96068.1| couch potato, isoform O [Drosophila melanogaster]
Length = 748
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFALFSTAQLAV 101
+EVRT+F++GLP D K REL L R GYE S + N K P+GF F T A
Sbjct: 439 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 498
Query: 102 AAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
AAK LQ + FD + + E AK N V +
Sbjct: 499 AAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSK 530
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQ 258
N PC+TLF+ NLG+ ++E EL+ +FS+ +K+L Q
Sbjct: 710 NAPCSTLFVANLGQFVSEHELKEVFSSHGNSNWLKLLHQ 748
>gi|195157804|ref|XP_002019784.1| GL12579 [Drosophila persimilis]
gi|194116375|gb|EDW38418.1| GL12579 [Drosophila persimilis]
Length = 632
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFALFSTAQLAV 101
+EVRT+F++GLP D K REL L R GYE S + N K P+GF F T A
Sbjct: 465 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 524
Query: 102 AAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
AAK LQ + FD + + E AK N V +
Sbjct: 525 AAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSK 556
>gi|442619721|ref|NP_001014632.3| couch potato, isoform S [Drosophila melanogaster]
gi|440217575|gb|AAX52960.3| couch potato, isoform S [Drosophila melanogaster]
Length = 962
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Query: 39 DNTNRIAHDE-VRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFA 92
D+ N +++E VRT+F++GLP D K REL L R GYE S + N K P+GF
Sbjct: 430 DSVNTASNEEEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFV 489
Query: 93 LFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
F T A AAK LQ + FD + + E AK N V +
Sbjct: 490 TFHTRAGAEAAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSK 530
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 29/108 (26%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQ--------------------- 258
N PC+TLF+ NLG+ ++E EL+ +FS+ PGF ++++ +
Sbjct: 710 NAPCSTLFVANLGQFVSEHELKEVFSSMPGFCRLRMHTKAMATATGSSCSTSNGSGSSSN 769
Query: 259 --------ERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
++H V FIEF+D +AS LQG + SS +RI++
Sbjct: 770 SNHNSAAVQQHPVAFIEFKDPPTASQAMQQLQGKYLLSSDRGSIRIEF 817
>gi|226372064|gb|ACO51657.1| U1 small nuclear ribonucleoprotein A [Rana catesbeiana]
Length = 279
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 17/142 (11%)
Query: 161 APSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVP----APSSYVPVQN 216
AP H P + H M PPP G+ P Q+P P +P P P+Q
Sbjct: 148 APRMMHMPGQTPYMHHPGMMPPP---------GIGPGQIP-PGGMPHGQMMPGQMAPMQP 197
Query: 217 TKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASS 276
+NPP + LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 198 ISENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENEVQAGA 256
Query: 277 VHHNLQGAVIPSSGSVGMRIQY 298
+LQG I S S M+I +
Sbjct: 257 ARESLQGFKITQSNS--MKISF 276
>gi|442619715|ref|NP_001262689.1| couch potato, isoform P [Drosophila melanogaster]
gi|440217572|gb|AGB96069.1| couch potato, isoform P [Drosophila melanogaster]
Length = 841
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Query: 39 DNTNRIAHDE-VRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFA 92
D+ N +++E VRT+F++GLP D K REL L R GYE S + N K P+GF
Sbjct: 430 DSVNTASNEEEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFV 489
Query: 93 LFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
F T A AAK LQ + FD + + E AK N V +
Sbjct: 490 TFHTRAGAEAAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSK 530
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 7/50 (14%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
N PC+TLF+ NLG+ ++E EL+ +FS G + RH + + E
Sbjct: 710 NAPCSTLFVANLGQFVSEHELKEVFSRGAGM-------ESRHDLLAKKLE 752
>gi|347966391|ref|XP_003435905.1| AGAP013145-PB [Anopheles gambiae str. PEST]
gi|333470079|gb|EGK97507.1| AGAP013145-PB [Anopheles gambiae str. PEST]
Length = 515
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 38 YDNTNRIAHDE-VRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGF 91
D+ N +++E VRT+F++GLP D K REL L R GYE S + N K P+GF
Sbjct: 235 MDSVNTASNEEEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGF 294
Query: 92 ALFSTAQLAVAAKDALQEMI-FDAETKSVLHTEMAKKNLFVKR 133
F+T A AAK LQ+ + FD + + E AK N V +
Sbjct: 295 VTFNTRAGAEAAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 337
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNS 273
N PC+TLF+ NLG+ ++E EL+ +F+ G + R E H E D++S
Sbjct: 460 NAPCSTLFVANLGQFVSEHELKEIFARGAGLEP----RMEHHLGKKSERTDLSS 509
>gi|340519782|gb|EGR50020.1| predicted protein [Trichoderma reesei QM6a]
Length = 660
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%)
Query: 209 SSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEF 268
++Y PV NPPCNTL++GNL E+EL+ LFS G+K+M + +CF+E+
Sbjct: 430 ANYPPVNPADQNPPCNTLYVGNLPMDACEDELKVLFSLTKGYKRMCFRIKHNGPMCFVEY 489
Query: 269 EDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
ED+ A+ L G + +S G+R+ +
Sbjct: 490 EDIAHATKALTTLYGFPLHNSVKGGIRLSF 519
>gi|195497499|ref|XP_002096126.1| GE25503 [Drosophila yakuba]
gi|194182227|gb|EDW95838.1| GE25503 [Drosophila yakuba]
Length = 1140
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Query: 39 DNTNRIAHDE-VRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFA 92
D+ N +++E VRT+F++GLP D K REL L R GYE S + N K P+GF
Sbjct: 448 DSVNTASNEEEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFV 507
Query: 93 LFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
F T A AAK LQ + FD + + E AK N V +
Sbjct: 508 TFHTRAGAEAAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSK 548
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 31/42 (73%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERH 261
N PC+TLF+ NLG+ ++E EL+ +FS+ PGF ++++ + H
Sbjct: 713 NAPCSTLFVANLGQFVSEHELKEVFSSMPGFCRLRMHTKGTH 754
>gi|358059557|dbj|GAA94714.1| hypothetical protein E5Q_01367 [Mixia osmundae IAM 14324]
Length = 1103
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 60/145 (41%), Gaps = 52/145 (35%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEA--------------------------- 78
+EV TIF+ G PDD++ERE QN+ + PG+EA
Sbjct: 546 QEEVSTIFVVGFPDDMQEREFQNMFIFCPGFEAATLKVPPGSSSSQGVETNFGLNAYDDA 605
Query: 79 -------SQVNY------------------KGEKPMGFALFSTAQLAVAAKDALQEMIFD 113
S +N+ + +GFA F T A+ A++ L D
Sbjct: 606 FGTNSIESTLNHFMQQQQSQQSNPQSASMASRRQIIGFAKFKTRTEAIDARNILTGRKVD 665
Query: 114 AETKSVLHTEMAKKNLFVKRGIVAD 138
AE +VL EMAKKNL KRG+ D
Sbjct: 666 AERGNVLKAEMAKKNLHTKRGLSND 690
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 220 NPPCNTLFIGNL------GESIN--EEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDV 271
NPPCNTL++G L SI EE LR F GF+++ ++ +CF+EFE
Sbjct: 900 NPPCNTLYLGGLPSLAASASSIRQLEETLRLHFQRLQGFRRLCFRQKSNGPMCFVEFEST 959
Query: 272 NSASSVHHNLQGAVIPSSGSVGMRIQY 298
++A+ + + G + G+R+ +
Sbjct: 960 DAATRAMNEMNGNTLGGLVRSGIRVSF 986
>gi|255572977|ref|XP_002527419.1| RNA binding protein, putative [Ricinus communis]
gi|223533229|gb|EEF34985.1| RNA binding protein, putative [Ricinus communis]
Length = 206
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%)
Query: 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNL 281
PC+TLFI NLG + E+ELR S PGF +K+ + V F +FE++ A +L
Sbjct: 122 PCSTLFIANLGPNCTEDELRHTLSQYPGFNVLKMRAKGGMPVAFADFEEIEQAIKAMEDL 181
Query: 282 QGAVIPSSGSVGMRIQY 298
QG ++PSS GM I+Y
Sbjct: 182 QGTLLPSSDRGGMHIEY 198
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+FI L + E EL++ L PG+ ++ KG P+ FA F + A+ A + LQ
Sbjct: 125 TLFIANLGPNCTEDELRHTLSQYPGFNVLKMRAKGGMPVAFADFEEIEQAIKAMEDLQGT 184
Query: 111 IFDAETKSVLHTEMAKKNL 129
+ + + +H E A+ +
Sbjct: 185 LLPSSDRGGMHIEYARSKM 203
>gi|367003990|ref|XP_003686728.1| hypothetical protein TPHA_0H00860 [Tetrapisispora phaffii CBS 4417]
gi|357525030|emb|CCE64294.1| hypothetical protein TPHA_0H00860 [Tetrapisispora phaffii CBS 4417]
Length = 588
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 13/127 (10%)
Query: 180 APPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEE 239
A P P + G G+ + A VP P++ NPPCNTL++GNL E+E
Sbjct: 412 ATPSVPNNGTGIVGISQADLSLLARVPPPANPA-----DQNPPCNTLYVGNLPPDATEQE 466
Query: 240 LRGLFSAQPGFKQMKVLRQERHT-----VCFIEFEDVNSASSVHHNLQGAVIPS---SGS 291
LR LFS+QPGF+++ + + +CF+EF+DV+ A+ L G +P S
Sbjct: 467 LRQLFSSQPGFRRLSFRNKNNNGNGHGPMCFVEFDDVSFATVALAELYGRQLPRPVISNK 526
Query: 292 VGMRIQY 298
G+R+ +
Sbjct: 527 GGIRLSF 533
>gi|62857647|ref|NP_001016784.1| small nuclear ribonucleoprotein polypeptide A [Xenopus (Silurana)
tropicalis]
gi|60618430|gb|AAH90598.1| small nuclear ribonucleoprotein polypeptide A [Xenopus (Silurana)
tropicalis]
gi|89273875|emb|CAJ82017.1| small nuclear ribonucleoprotein polypeptide A [Xenopus (Silurana)
tropicalis]
Length = 282
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 119/286 (41%), Gaps = 38/286 (13%)
Query: 44 IAHDEVR---TIFITGLPDDVKERELQNLL--------RWLPGYEASQVNYKGEKPMGFA 92
+A EVR TI+I L + +K+ EL+ L + L + + +G+ F
Sbjct: 1 MAVQEVRPNNTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQ---AFV 57
Query: 93 LFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGG 152
+F A A ++Q F + + +++ + +G + + Q KR G
Sbjct: 58 IFKEISSATNALRSMQGFPFYDKPMRIQYSKSDSDIIAKMKGTYVERDRKRQEKRKVKGQ 117
Query: 153 DYTHTGYSAPSPFHAP------------PAPVWGPHGYMAPPPPPYDPYGGY----GVPP 196
+ + P P P P PY + G G+ P
Sbjct: 118 EAPGVKKALPGAALLPGVPGQMAGMQNIPGMTQAPRMMHMAGQAPYMHHPGMMPPPGMAP 177
Query: 197 VQMPAPAPVP----APSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQ 252
Q+P P +P P P+Q +NPP + LF+ NL E NE L LF+ PGFK+
Sbjct: 178 GQIP-PGGMPHGHLMPGQMAPMQPISENPPNHILFLTNLPEETNELMLSMLFNQFPGFKE 236
Query: 253 MKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
++++ RH + F+EF++ A + +LQG I S S M+I +
Sbjct: 237 VRLV-PGRHDIAFVEFDNEVQAGAARESLQGFKITQSNS--MKISF 279
>gi|347966393|ref|XP_003435906.1| AGAP013145-PA [Anopheles gambiae str. PEST]
gi|333470078|gb|EGK97506.1| AGAP013145-PA [Anopheles gambiae str. PEST]
Length = 411
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 38 YDNTNRIAHDE-VRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGF 91
D+ N +++E VRT+F++GLP D K REL L R GYE S + N K P+GF
Sbjct: 235 MDSVNTASNEEEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGF 294
Query: 92 ALFSTAQLAVAAKDALQEMI-FDAETKSVLHTEMAKKNLFVKR 133
F+T A AAK LQ+ + FD + + E AK N V +
Sbjct: 295 VTFNTRAGAEAAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 337
>gi|321172607|gb|ADW77182.1| couch potato [Culex pipiens]
Length = 252
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
Query: 39 DNTNRIAHDE-VRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFA 92
D+ N +++E VRT+F++GLP D K REL L R GYE S + N K P+GF
Sbjct: 75 DSVNTASNEEEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFV 134
Query: 93 LFSTAQLAVAAKDALQEMI-FDAETKSVLHTEMAKKNLFVKR 133
FST A AAK LQ+ + FD + + E AK N V +
Sbjct: 135 TFSTRSGAEAAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 176
>gi|255711664|ref|XP_002552115.1| KLTH0B07546p [Lachancea thermotolerans]
gi|238933493|emb|CAR21677.1| KLTH0B07546p [Lachancea thermotolerans CBS 6340]
Length = 639
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 10/89 (11%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT-----VCFIEFEDVNSA 274
NPPCNTL++GNL E ELR LFS Q GF+++ + + +CF+EFEDV A
Sbjct: 517 NPPCNTLYVGNLPPDATEHELRQLFSTQKGFRRLSFRNKNTNGNGHGPMCFVEFEDVAHA 576
Query: 275 SSVHHNLQGAVIPSSGSV-----GMRIQY 298
+ L G +P SG+ G+R+ +
Sbjct: 577 TRALAELYGRQLPRSGTSHNNKGGIRLSF 605
>gi|367008274|ref|XP_003678637.1| hypothetical protein TDEL_0A00940 [Torulaspora delbrueckii]
gi|359746294|emb|CCE89426.1| hypothetical protein TDEL_0A00940 [Torulaspora delbrueckii]
Length = 682
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 8/87 (9%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT-----VCFIEFEDVNSA 274
NPPCNTL++GNL E+ELR LFS Q GF+++ + + +CF+EFEDV+ A
Sbjct: 549 NPPCNTLYVGNLPPDTTEQELRHLFSGQQGFRRLSFRNKNSNGNGHGPMCFVEFEDVSFA 608
Query: 275 SSVHHNLQGAVIP---SSGSVGMRIQY 298
+ L G+ +P +S G+R+ +
Sbjct: 609 TRALAELYGSQLPRASASNKGGIRLSF 635
>gi|391342685|ref|XP_003745646.1| PREDICTED: uncharacterized protein LOC100903800 [Metaseiulus
occidentalis]
Length = 319
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFALFSTAQLA 100
+EVRT+F++GLP D K REL L R GYE S + N K P+GF FST A
Sbjct: 23 EEEVRTLFVSGLPMDAKPRELYLLFRAYKGYEGSLLKVTSKNGKTSSPVGFVTFSTRAGA 82
Query: 101 VAAKDALQEMI-FDAETKSVLHTEMAKKNLFVKR 133
AAK LQ+ + FD + + E AK N V +
Sbjct: 83 EAAKQELQQGVRFDPDLPQTIRLEFAKSNTKVSK 116
>gi|190344482|gb|EDK36163.2| hypothetical protein PGUG_00261 [Meyerozyma guilliermondii ATCC
6260]
Length = 589
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 17/96 (17%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT-------------VCFI 266
NPPCNTL++GNL E ELR LFS Q GF+++ + + + +CF+
Sbjct: 452 NPPCNTLYVGNLPPDATEAELRALFSPQKGFRRLSFRTKNQSSAGPSSATSHNHGPMCFV 511
Query: 267 EFEDVNSASSVHHNLQGAVIP----SSGSVGMRIQY 298
EFEDV A+ L G +P S+G G+R+ +
Sbjct: 512 EFEDVAHATRALAELYGRALPRPNGSNGKGGIRLSF 547
>gi|1173326|sp|P45429.1|SNRPA_XENLA RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|65181|emb|CAA41021.1| U1 A protein [Xenopus laevis]
Length = 282
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 118/286 (41%), Gaps = 38/286 (13%)
Query: 44 IAHDEVR---TIFITGLPDDVKERELQNLL--------RWLPGYEASQVNYKGEKPMGFA 92
++ EVR TI+I L + +K+ EL+ L + L + + +G+ F
Sbjct: 1 MSIQEVRPNNTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRNLKMRGQ---AFV 57
Query: 93 LFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGG 152
+F A A ++Q F + + +++ + +G + + Q KR
Sbjct: 58 IFKETSSATNALRSMQGFPFYDKPMRIQYSKTDSDIIAKMKGTFVERDRKRQEKRKVKVP 117
Query: 153 DYTHTGYSAPSPFHAP------------PAPVWGPHGYMAPPPPPYDPYGGY----GVPP 196
+ + P P P P PY + G G+ P
Sbjct: 118 EVQGVKNAMPGAALLPGVPGQMAAMQDMPGMTQAPRMMHMAGQAPYMHHPGMMPPPGMAP 177
Query: 197 VQMPAPAPVP----APSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQ 252
QMP P +P P P+Q +NPP + LF+ NL E NE L LF+ PGFK+
Sbjct: 178 GQMP-PGGMPHGQLMPGQMAPMQPISENPPNHILFLTNLPEETNELMLSMLFNQFPGFKE 236
Query: 253 MKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
++++ RH + F+EF++ A + +LQG I S S M+I +
Sbjct: 237 VRLV-PGRHDIAFVEFDNEVQAGAARESLQGFKITQSNS--MKISF 279
>gi|367007687|ref|XP_003688573.1| hypothetical protein TPHA_0O01720 [Tetrapisispora phaffii CBS 4417]
gi|357526882|emb|CCE66139.1| hypothetical protein TPHA_0O01720 [Tetrapisispora phaffii CBS 4417]
Length = 619
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 8/87 (9%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT-----VCFIEFEDVNSA 274
NPPCNTL++GNL E+ELR LFS Q GF+++ + + +CF+EF+DV+ A
Sbjct: 495 NPPCNTLYVGNLPSDATEQELRQLFSVQQGFRRLSFRNKNNNGNGHGPICFVEFDDVSFA 554
Query: 275 SSVHHNLQGAVIPS---SGSVGMRIQY 298
+ L G+ +PS S G+R+ +
Sbjct: 555 TRALAELYGSQLPSATVSNKGGIRLSF 581
>gi|195055450|ref|XP_001994632.1| GH15012 [Drosophila grimshawi]
gi|193892395|gb|EDV91261.1| GH15012 [Drosophila grimshawi]
Length = 193
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Query: 39 DNTNRIAHDE-VRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFA 92
D+ N +++E VRT+F++GLP D K REL L R GYE S + N K P+GF
Sbjct: 17 DSVNTASNEEEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFV 76
Query: 93 LFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
F T A AAK LQ + FD + + E AK N V +
Sbjct: 77 TFHTRAGAEAAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSK 117
>gi|148222234|ref|NP_001080089.1| U1 small nuclear ribonucleoprotein A [Xenopus laevis]
gi|27924189|gb|AAH44979.1| Snf protein [Xenopus laevis]
Length = 282
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 118/286 (41%), Gaps = 38/286 (13%)
Query: 44 IAHDEVR---TIFITGLPDDVKERELQNLL--------RWLPGYEASQVNYKGEKPMGFA 92
++ EVR TI+I L + +K+ EL+ L + L + + +G+ F
Sbjct: 1 MSIQEVRPNNTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRNLKMRGQ---AFV 57
Query: 93 LFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGG 152
+F A A ++Q F + + +++ + +G + + Q KR
Sbjct: 58 IFKETSSATNALRSMQGFPFYDKPMRIQYSKTDSDIIAKMKGTFVERDRKRQEKRKVKVP 117
Query: 153 DYTHTGYSAPSPFHAP------------PAPVWGPHGYMAPPPPPYDPYGGY----GVPP 196
+ + P P P P PY + G G+ P
Sbjct: 118 EVQGVKNAMPGAALLPGVPGQMAAMQNMPGMTQAPRMMHMAGQAPYMHHPGMMPPPGMAP 177
Query: 197 VQMPAPAPVP----APSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQ 252
QMP P +P P P+Q +NPP + LF+ NL E NE L LF+ PGFK+
Sbjct: 178 GQMP-PGGMPHGQLMPGQMAPMQPISENPPNHILFLTNLPEETNELMLSMLFNQFPGFKE 236
Query: 253 MKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
++++ RH + F+EF++ A + +LQG I S S M+I +
Sbjct: 237 VRLV-PGRHDIAFVEFDNEVQAGAARESLQGFKITQSNS--MKISF 279
>gi|442619723|ref|NP_001014631.3| couch potato, isoform T [Drosophila melanogaster]
gi|442619727|ref|NP_001163640.2| couch potato, isoform V [Drosophila melanogaster]
gi|440217576|gb|AAX52961.3| couch potato, isoform T [Drosophila melanogaster]
gi|440217578|gb|ACZ94936.2| couch potato, isoform V [Drosophila melanogaster]
Length = 607
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 39 DNTNRIAHDE-VRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFA 92
D+ N +++E VRT+F++GLP D K REL L R GYE S + N K P+GF
Sbjct: 430 DSVNTASNEEEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFV 489
Query: 93 LFSTAQLAVAAKDALQEMI-FDAETKSVLHTEMAKKNLFVKR 133
F T A AAK LQ+ + FD + + E AK N V +
Sbjct: 490 TFHTRAGAEAAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 531
>gi|442619719|ref|NP_732282.6| couch potato, isoform R [Drosophila melanogaster]
gi|440217574|gb|AAF55483.7| couch potato, isoform R [Drosophila melanogaster]
Length = 749
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFALFSTAQLAV 101
+EVRT+F++GLP D K REL L R GYE S + N K P+GF F T A
Sbjct: 439 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 498
Query: 102 AAKDALQEMI-FDAETKSVLHTEMAKKNLFVKR 133
AAK LQ+ + FD + + E AK N V +
Sbjct: 499 AAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 531
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQ 258
N PC+TLF+ NLG+ ++E EL+ +FS+ +K+L Q
Sbjct: 711 NAPCSTLFVANLGQFVSEHELKEVFSSHGNSNWLKLLHQ 749
>gi|50311967|ref|XP_456015.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645151|emb|CAG98723.1| KLLA0F20834p [Kluyveromyces lactis]
Length = 616
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 10/100 (10%)
Query: 193 GVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQ 252
G+ V + A VP P++ NPPCNTL++GNL E+ELR LF Q GFK+
Sbjct: 423 GISQVDLSLLARVPPPANPA-----DQNPPCNTLYVGNLPPDATEQELRQLFGGQKGFKR 477
Query: 253 MKVLRQERHT-----VCFIEFEDVNSASSVHHNLQGAVIP 287
+ + + +CF+EFEDV A+ L G+ +P
Sbjct: 478 LSFRNKNNNNSGHGPMCFVEFEDVAHATRALAELYGSQLP 517
>gi|189234175|ref|XP_968800.2| PREDICTED: similar to RE20544p [Tribolium castaneum]
Length = 187
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 40 NTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFALF 94
NTN +EVRT+F++GLP D K REL L R GYE S + N K P+GF F
Sbjct: 17 NTNN-GEEEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTF 75
Query: 95 STAQLAVAAKDALQEMI-FDAETKSVLHTEMAKKNLFVKR 133
+T A AAK LQ+ + FD + + E AK N V +
Sbjct: 76 NTRAGAEAAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 115
>gi|365989942|ref|XP_003671801.1| hypothetical protein NDAI_0H03850 [Naumovozyma dairenensis CBS 421]
gi|343770574|emb|CCD26558.1| hypothetical protein NDAI_0H03850 [Naumovozyma dairenensis CBS 421]
Length = 742
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 10/96 (10%)
Query: 213 PVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT-------VCF 265
PV NPPCNTL++GNL E ELR LFS Q GF+++ + + +CF
Sbjct: 615 PVNPADQNPPCNTLYVGNLPPDATENELRQLFSCQNGFRRLSFRNKNTNGHGHGHGPMCF 674
Query: 266 IEFEDVNSASSVHHNLQGAVIPS---SGSVGMRIQY 298
+EFED+N A+ L G+ +P S G+R+ +
Sbjct: 675 VEFEDINFATQALGELYGSQLPRATLSSKGGIRLSF 710
>gi|115894424|ref|XP_001198644.1| PREDICTED: cell wall integrity protein scw1-like
[Strongylocentrotus purpuratus]
Length = 154
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%)
Query: 204 PVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTV 263
P+ ++ V C+TLF+ NLG + +E+ELR PGF ++++ +
Sbjct: 27 PISMANAATMVAMANSGAACSTLFLANLGTNTSEQELRDTLRCLPGFNRLRMHNKGGAPC 86
Query: 264 CFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
CF+EF++V A +LQG ++ SS G+R+++
Sbjct: 87 CFVEFQNVGFAMQALAHLQGLMLKSSDRGGLRVEF 121
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
T+F+ L + E+EL++ LR LPG+ +++ KG P F F A+ A LQ +
Sbjct: 48 TLFLANLGTNTSEQELRDTLRCLPGFNRLRMHNKGGAPCCFVEFQNVGFAMQALAHLQGL 107
Query: 111 IFDAETKSVLHTEMAKKNL 129
+ + + L E AK N+
Sbjct: 108 MLKSSDRGGLRVEFAKANM 126
>gi|366992418|ref|XP_003675974.1| hypothetical protein NCAS_0D00290 [Naumovozyma castellii CBS 4309]
gi|342301840|emb|CCC69610.1| hypothetical protein NCAS_0D00290 [Naumovozyma castellii CBS 4309]
Length = 626
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 8/87 (9%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT-----VCFIEFEDVNSA 274
NPPCNTL++GNL E+ELR LFS+Q GF+++ + + +CF+EFED++ A
Sbjct: 512 NPPCNTLYVGNLPPDATEQELRQLFSSQEGFRRLSFRNKNTNGHGHGPMCFVEFEDISFA 571
Query: 275 SSVHHNLQGAVIPS---SGSVGMRIQY 298
+ L G+ +P S G+R+ +
Sbjct: 572 TRALAELYGSQLPRPSLSSKGGIRLSF 598
>gi|402579243|gb|EJW73195.1| hypothetical protein WUBG_15898, partial [Wuchereria bancrofti]
Length = 419
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 42 NRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEK------PMGFALFS 95
N ++ VRT+F++GLP D K+REL L R GYE S + K P+GF FS
Sbjct: 31 NITGNEPVRTLFVSGLPMDAKQRELYLLFRSCRGYENSLLRITQSKDGGIASPVGFVTFS 90
Query: 96 TAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFV 131
+A+ A A ALQ +FD T + E AK N V
Sbjct: 91 SAEDAEIAMKALQSALFDPITGHKIRLEKAKSNTKV 126
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 42 NRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEK 87
N ++ VRT+F++GLP D K+REL L R GYE S + K
Sbjct: 372 NITGNEPVRTLFVSGLPMDAKQRELYLLFRSCRGYENSLLRITQSK 417
>gi|347839962|emb|CCD54534.1| hypothetical protein [Botryotinia fuckeliana]
Length = 1036
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%)
Query: 211 YVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFED 270
+ P+ + PPCNTL + NL + +E EL +FS Q GFK++ + ++ +CF+EFED
Sbjct: 692 FQPINTAEQYPPCNTLLVKNLPRNTSEHELMMIFSKQKGFKRLCLGTEQNGPMCFVEFED 751
Query: 271 VNSASSVHHNLQGAVIPSSGSVGMRIQY 298
V A+ + G + +S G+ + +
Sbjct: 752 VAFATKCTQEINGTSLQNSTKGGIWLSF 779
>gi|449513226|ref|XP_002193869.2| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Taeniopygia
guttata]
Length = 322
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 55/101 (54%), Gaps = 8/101 (7%)
Query: 198 QMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLR 257
Q A AP P + VP DNPP LF+ NL E NE L LF+ PGFK+++ L
Sbjct: 227 QNSASAPGTTPQNQVP-----DNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVR-LV 280
Query: 258 QERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
RH + F+EFE+ N A + LQG IP S + M+I Y
Sbjct: 281 PGRHDIAFVEFENENQAGAARDALQGFKIPLSHA--MKITY 319
>gi|347966395|ref|XP_003435907.1| AGAP013145-PC [Anopheles gambiae str. PEST]
gi|333470080|gb|EGK97508.1| AGAP013145-PC [Anopheles gambiae str. PEST]
Length = 243
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
Query: 39 DNTNRIAHDE-VRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFA 92
D+ N +++E VRT+F++GLP D K REL L R GYE S + N K P+GF
Sbjct: 68 DSVNTASNEEEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFV 127
Query: 93 LFSTAQLAVAAKDALQEMI-FDAETKSVLHTEMAKKNLFVKR 133
F+T A AAK LQ+ + FD + + E AK N V +
Sbjct: 128 TFNTRAGAEAAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 169
>gi|259149165|emb|CAY82407.1| Whi3p [Saccharomyces cerevisiae EC1118]
gi|365763510|gb|EHN05038.1| Whi3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 661
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 12/90 (13%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT--------VCFIEFEDV 271
NPPCNTL++GNL E+ELR LFS Q GF+++ R + T +CF+EF+DV
Sbjct: 534 NPPCNTLYVGNLPSDATEQELRQLFSGQEGFRRLS-FRNKNTTSNGHSHGPMCFVEFDDV 592
Query: 272 NSASSVHHNLQGAVIPS---SGSVGMRIQY 298
+ A+ L G +P S G+R+ +
Sbjct: 593 SFATRALAELYGTQLPRSTVSSKGGIRLSF 622
>gi|402226337|gb|EJU06397.1| hypothetical protein DACRYDRAFT_92417 [Dacryopinax sp. DJM-731 SS1]
Length = 1156
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 8/97 (8%)
Query: 210 SYVPVQNTKDNPPCNTLFIGNL------GESIN--EEELRGLFSAQPGFKQMKVLRQERH 261
SY+ ++ NPP NTL++GNL S N EE L+ +FS PGF+++ ++
Sbjct: 914 SYIRTNSSDQNPPINTLYVGNLPTTPPASLSSNPLEENLKTVFSQCPGFRKLCFRQKSNG 973
Query: 262 TVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+CFIEF+DV+ A+ H+L G + G+R+ +
Sbjct: 974 PMCFIEFDDVDYATKAMHSLYGHTLNGLVKGGIRLSF 1010
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 17/111 (15%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGI--VADTNAYDQSK 146
+GFA F T + A A+D LQ D E +VL EMAKKNL KRG+ + ++A
Sbjct: 481 IGFAKFRTREQASEARDVLQGRRIDVEKGAVLKAEMAKKNLHTKRGVGPLGGSSAAG--- 537
Query: 147 RLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPV 197
+ G + P +PP + GP+G + P Y G G+PP+
Sbjct: 538 ---------NAGANDPMSLASPPG-MNGPNGAVG--LPGYAGVQGSGLPPL 576
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY--KGEKPMGFALFSTAQLAVAAKDA 106
+ TIF+ G PDD++ERE QN+ + PG+EA+ + K G + A AA +
Sbjct: 332 ISTIFVVGFPDDMQEREFQNMFTFSPGFEAATLKIPNKDLTSYGPGALAPGSSAAAAVNV 391
Query: 107 LQEMIF 112
L++ F
Sbjct: 392 LRQAGF 397
>gi|323346831|gb|EGA81110.1| Whi3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 629
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 12/90 (13%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT--------VCFIEFEDV 271
NPPCNTL++GNL E+ELR LFS Q GF+++ R + T +CF+EF+DV
Sbjct: 534 NPPCNTLYVGNLPSDATEQELRQLFSGQEGFRRLS-FRNKNTTSNGHSHGPMCFVEFDDV 592
Query: 272 NSASSVHHNLQGAVIPS---SGSVGMRIQY 298
+ A+ L G +P S G+R+ +
Sbjct: 593 SFATRALAELYGXQLPRSTVSSKGGIRLSF 622
>gi|448106273|ref|XP_004200705.1| Piso0_003301 [Millerozyma farinosa CBS 7064]
gi|448109390|ref|XP_004201336.1| Piso0_003301 [Millerozyma farinosa CBS 7064]
gi|359382127|emb|CCE80964.1| Piso0_003301 [Millerozyma farinosa CBS 7064]
gi|359382892|emb|CCE80199.1| Piso0_003301 [Millerozyma farinosa CBS 7064]
Length = 496
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 17/96 (17%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT-------------VCFI 266
NPPCNTL++GNL E+ELR LFS Q GF+++ + + +CF+
Sbjct: 355 NPPCNTLYVGNLPPDATEQELRALFSPQKGFRRLSFRTKNSSSSNSGHSGSHNHGPMCFV 414
Query: 267 EFEDVNSASSVHHNLQGAVIP----SSGSVGMRIQY 298
EFEDV A+ L G +P S+G G+R+ +
Sbjct: 415 EFEDVAHATRALAELYGRTLPRPGGSNGKGGIRLSF 450
>gi|323335900|gb|EGA77178.1| Whi3p [Saccharomyces cerevisiae Vin13]
Length = 629
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 12/90 (13%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT--------VCFIEFEDV 271
NPPCNTL++GNL E+ELR LFS Q GF+++ R + T +CF+EF+DV
Sbjct: 534 NPPCNTLYVGNLPSDATEQELRQLFSGQEGFRRLS-FRNKNTTSNGHSHGPMCFVEFDDV 592
Query: 272 NSASSVHHNLQGAVIPS---SGSVGMRIQY 298
+ A+ L G +P S G+R+ +
Sbjct: 593 SFATRALAELYGXQLPRSTVSSKGGIRLSF 622
>gi|410075513|ref|XP_003955339.1| hypothetical protein KAFR_0A07700 [Kazachstania africana CBS 2517]
gi|372461921|emb|CCF56204.1| hypothetical protein KAFR_0A07700 [Kazachstania africana CBS 2517]
Length = 571
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 8/87 (9%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT-----VCFIEFEDVNSA 274
NPPCNTL++GNL E+ELR LFS Q GF+++ + + +CF+EF+DV+ A
Sbjct: 438 NPPCNTLYVGNLPPDATEQELRQLFSKQQGFRRLSFKNKSSNGNGHGPMCFVEFDDVSFA 497
Query: 275 SSVHHNLQGAVIP---SSGSVGMRIQY 298
+ L G+ +P +S G+R+ +
Sbjct: 498 TRALAELYGSQLPRTTTSNKGGIRLSF 524
>gi|156408498|ref|XP_001641893.1| predicted protein [Nematostella vectensis]
gi|156229034|gb|EDO49830.1| predicted protein [Nematostella vectensis]
Length = 97
Score = 64.7 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 46/87 (52%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQ 108
VRT+F++GLP DVK RE+ L R GYE S + ++P+ F F A AK LQ
Sbjct: 1 VRTLFVSGLPLDVKPREVYLLFRSFKGYEGSLLKLTDKQPVAFVTFENKDCASDAKSELQ 60
Query: 109 EMIFDAETKSVLHTEMAKKNLFVKRGI 135
+ FD + L E AK N V + +
Sbjct: 61 GVQFDPDVSQTLRLEFAKSNTKVSKPV 87
>gi|401842199|gb|EJT44453.1| WHI4-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 651
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 12/79 (15%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT-----------VCFIEF 268
NPPCNTL++GNL E+ELR LFS QPGF+++ R + ++ +CF+EF
Sbjct: 530 NPPCNTLYVGNLPPDATEQELRQLFSNQPGFRRLS-FRNKMNSHGHGNGHGHGPICFVEF 588
Query: 269 EDVNSASSVHHNLQGAVIP 287
EDV+ A+ L G+ +P
Sbjct: 589 EDVSFATRALAELYGSQLP 607
>gi|365757759|gb|EHM99639.1| Whi4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 651
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 12/79 (15%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT-----------VCFIEF 268
NPPCNTL++GNL E+ELR LFS QPGF+++ R + ++ +CF+EF
Sbjct: 530 NPPCNTLYVGNLPPDATEQELRQLFSNQPGFRRLS-FRNKMNSHGHGNGHGHGPICFVEF 588
Query: 269 EDVNSASSVHHNLQGAVIP 287
EDV+ A+ L G+ +P
Sbjct: 589 EDVSFATRALAELYGSQLP 607
>gi|195107387|ref|XP_001998295.1| GI23706 [Drosophila mojavensis]
gi|193914889|gb|EDW13756.1| GI23706 [Drosophila mojavensis]
Length = 609
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFALFSTAQLAV 101
+EVRT+F++GLP D K REL L R GYE S + N K P+GF F T A
Sbjct: 441 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 500
Query: 102 AAKDALQEMI-FDAETKSVLHTEMAKKNLFVKR 133
AAK LQ+ + FD + + E AK N V +
Sbjct: 501 AAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 533
>gi|198455332|ref|XP_001359948.2| GA16117 [Drosophila pseudoobscura pseudoobscura]
gi|198133199|gb|EAL29100.2| GA16117 [Drosophila pseudoobscura pseudoobscura]
Length = 692
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFALFSTAQLAV 101
+EVRT+F++GLP D K REL L R GYE S + N K P+GF F T A
Sbjct: 524 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 583
Query: 102 AAKDALQEMI-FDAETKSVLHTEMAKKNLFVKR 133
AAK LQ+ + FD + + E AK N V +
Sbjct: 584 AAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 616
>gi|449512588|ref|XP_004176179.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Taeniopygia
guttata]
Length = 221
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 197 VQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVL 256
Q A AP P + VP DNPP LF+ NL E NE L LF+ PGFK+++++
Sbjct: 125 TQNSASAPGTTPQNQVP-----DNPPNCILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV 179
Query: 257 RQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
RH + F+EFE+ N A + LQG IP S + M+I Y
Sbjct: 180 -PGRHDIAFVEFENENQAGAARDALQGFKIPPSHA--MKITY 218
>gi|323352890|gb|EGA85192.1| Whi3p [Saccharomyces cerevisiae VL3]
Length = 629
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 12/90 (13%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT--------VCFIEFEDV 271
NPPCNTL++GNL E+ELR LFS Q GF+++ R + T +CF+EF+DV
Sbjct: 534 NPPCNTLYVGNLPSDATEQELRQLFSGQEGFRRLS-FRNKNTTSNGHSHGPMCFVEFDDV 592
Query: 272 NSASSVHHNLQGAVIPS---SGSVGMRIQY 298
+ A+ L G +P S G+R+ +
Sbjct: 593 SFATRALAELYGRQLPRSTVSSKGGIRLSF 622
>gi|195570023|ref|XP_002103008.1| GD19192 [Drosophila simulans]
gi|194198935|gb|EDX12511.1| GD19192 [Drosophila simulans]
Length = 221
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 39 DNTNRIAH-DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFA 92
D+ NR+ VRT+F++GLP D K REL L R GYE S + N K P+GF
Sbjct: 45 DSMNRLNFIQSVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFV 104
Query: 93 LFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
F T A AAK LQ + FD + + E AK N V +
Sbjct: 105 TFHTRAGAEAAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSK 145
>gi|365758778|gb|EHN00605.1| Whi3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 664
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 12/90 (13%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT--------VCFIEFEDV 271
NPPCNTL++GNL E+ELR LFS Q GF+++ R + T +CF+EF+DV
Sbjct: 537 NPPCNTLYVGNLPSDATEQELRQLFSGQEGFRRLS-FRNKNTTSNGHSHGPMCFVEFDDV 595
Query: 272 NSASSVHHNLQGAVIPS---SGSVGMRIQY 298
+ A+ L G +P S G+R+ +
Sbjct: 596 SFATRALAELYGRQLPRSTVSSKGGIRLSF 625
>gi|170052648|ref|XP_001862318.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873473|gb|EDS36856.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 175
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFALFSTAQLAVA 102
+VRT+F++GLP D K REL L R GYE S + N K P+GF FST A A
Sbjct: 8 QVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFSTRSGAEA 67
Query: 103 AKDALQEMI-FDAETKSVLHTEMAKKNLFVKR 133
AK LQ+ + FD + + E AK N V +
Sbjct: 68 AKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 99
>gi|390337886|ref|XP_794412.3| PREDICTED: protein couch potato-like [Strongylocentrotus
purpuratus]
Length = 124
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY-----KGEKPMGFALFSTAQLAVAA 103
VRT+F++GLP D K REL L R GYE S + K + P+GF F + A AA
Sbjct: 12 VRTLFVSGLPMDAKPRELYLLFRAYQGYEGSLLKVTSKPGKNQSPVGFVTFESRAGAEAA 71
Query: 104 KDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
K ALQ + FD E + E AK N V +
Sbjct: 72 KQALQGVRFDPELPQTIRLEFAKSNTKVTK 101
>gi|260943586|ref|XP_002616091.1| hypothetical protein CLUG_03332 [Clavispora lusitaniae ATCC 42720]
gi|238849740|gb|EEQ39204.1| hypothetical protein CLUG_03332 [Clavispora lusitaniae ATCC 42720]
Length = 589
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 17/96 (17%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT-------------VCFI 266
NPPCNTL++GNL E ELR LFS Q GF+++ + + + +CF+
Sbjct: 454 NPPCNTLYVGNLPPDATEAELRALFSPQKGFRRLSFRTKNQSSSSGSGSSGHNHGPMCFV 513
Query: 267 EFEDVNSASSVHHNLQGAVIP----SSGSVGMRIQY 298
EFEDV A+ L G +P S+G G+R+ +
Sbjct: 514 EFEDVAHATIALAELYGRALPRPNGSNGKGGIRLSF 549
>gi|349580746|dbj|GAA25905.1| K7_Whi3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 661
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 12/90 (13%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT--------VCFIEFEDV 271
NPPCNTL++GNL E+ELR LFS Q GF+++ R + T +CF+EF+DV
Sbjct: 534 NPPCNTLYVGNLPSDATEQELRQLFSGQEGFRRLS-FRNKNTTSNGHSHGPMCFVEFDDV 592
Query: 272 NSASSVHHNLQGAVIPS---SGSVGMRIQY 298
+ A+ L G +P S G+R+ +
Sbjct: 593 SFATRALAELYGRQLPRSTVSSKGGIRLSF 622
>gi|323303359|gb|EGA57155.1| Whi3p [Saccharomyces cerevisiae FostersB]
Length = 661
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 12/90 (13%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT--------VCFIEFEDV 271
NPPCNTL++GNL E+ELR LFS Q GF+++ R + T +CF+EF+DV
Sbjct: 534 NPPCNTLYVGNLPSDATEQELRQLFSGQEGFRRLS-FRNKNTTSNGHSHGPMCFVEFDDV 592
Query: 272 NSASSVHHNLQGAVIPS---SGSVGMRIQY 298
+ A+ L G +P S G+R+ +
Sbjct: 593 SFATRALAELYGRQLPRSTVSSKGGIRLSF 622
>gi|207341833|gb|EDZ69780.1| YNL197Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 661
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 12/90 (13%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT--------VCFIEFEDV 271
NPPCNTL++GNL E+ELR LFS Q GF+++ R + T +CF+EF+DV
Sbjct: 534 NPPCNTLYVGNLPSDATEQELRQLFSGQEGFRRLS-FRNKNTTSNGHSHGPMCFVEFDDV 592
Query: 272 NSASSVHHNLQGAVIPS---SGSVGMRIQY 298
+ A+ L G +P S G+R+ +
Sbjct: 593 SFATRALAELYGRQLPRSTVSSKGGIRLSF 622
>gi|151944344|gb|EDN62622.1| whiskey [Saccharomyces cerevisiae YJM789]
Length = 661
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 12/90 (13%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT--------VCFIEFEDV 271
NPPCNTL++GNL E+ELR LFS Q GF+++ R + T +CF+EF+DV
Sbjct: 534 NPPCNTLYVGNLPSDATEQELRQLFSGQEGFRRLS-FRNKNTTSNGHSHGPMCFVEFDDV 592
Query: 272 NSASSVHHNLQGAVIPS---SGSVGMRIQY 298
+ A+ L G +P S G+R+ +
Sbjct: 593 SFATRALAELYGRQLPRSTVSSKGGIRLSF 622
>gi|6324132|ref|NP_014202.1| Whi3p [Saccharomyces cerevisiae S288c]
gi|465481|sp|P34761.1|WHI3_YEAST RecName: Full=Protein WHI3
gi|393077|gb|AAA03320.1| Whi3p [Saccharomyces cerevisiae]
gi|600068|emb|CAA55511.1| N1382 [Saccharomyces cerevisiae]
gi|1302195|emb|CAA96092.1| WHI3 [Saccharomyces cerevisiae]
gi|285814462|tpg|DAA10356.1| TPA: Whi3p [Saccharomyces cerevisiae S288c]
gi|392296797|gb|EIW07898.1| Whi3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 661
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 12/90 (13%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT--------VCFIEFEDV 271
NPPCNTL++GNL E+ELR LFS Q GF+++ R + T +CF+EF+DV
Sbjct: 534 NPPCNTLYVGNLPSDATEQELRQLFSGQEGFRRLS-FRNKNTTSNGHSHGPMCFVEFDDV 592
Query: 272 NSASSVHHNLQGAVIPS---SGSVGMRIQY 298
+ A+ L G +P S G+R+ +
Sbjct: 593 SFATRALAELYGRQLPRSTVSSKGGIRLSF 622
>gi|256270770|gb|EEU05931.1| Whi3p [Saccharomyces cerevisiae JAY291]
Length = 661
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 12/90 (13%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT--------VCFIEFEDV 271
NPPCNTL++GNL E+ELR LFS Q GF+++ R + T +CF+EF+DV
Sbjct: 534 NPPCNTLYVGNLPSDATEQELRQLFSGQEGFRRLS-FRNKNTTSNGHSHGPMCFVEFDDV 592
Query: 272 NSASSVHHNLQGAVIPS---SGSVGMRIQY 298
+ A+ L G +P S G+R+ +
Sbjct: 593 SFATRALAELYGRQLPRSTVSSKGGIRLSF 622
>gi|403216283|emb|CCK70780.1| hypothetical protein KNAG_0F01120 [Kazachstania naganishii CBS
8797]
Length = 635
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 22/130 (16%)
Query: 191 GYGVPPVQMPAPAPVPAPSSYV--------------PVQNTKDNPPCNTLFIGNLGESIN 236
G G+ P P+ AP S P NPPCNTL++GNL
Sbjct: 450 GSGMKPATNPSVAPANVAGSSTMSQADLSLLAKVPPPANPADQNPPCNTLYVGNLPPDAT 509
Query: 237 EEELRGLFSAQPGFKQMKVLRQERHT-----VCFIEFEDVNSASSVHHNLQGAVIPS--- 288
E+ELR LFSAQ GF+++ + + +CF+EF+DV+ A+ L G+ +P
Sbjct: 510 EQELRHLFSAQQGFRRLSFRNKNGNGNGHGPMCFVEFDDVSFATRALAELYGSKLPRSTI 569
Query: 289 SGSVGMRIQY 298
S G+R+ +
Sbjct: 570 SNKGGIRLSF 579
>gi|156837691|ref|XP_001642865.1| hypothetical protein Kpol_400p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156113441|gb|EDO15007.1| hypothetical protein Kpol_400p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 600
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 8/87 (9%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT-----VCFIEFEDVNSA 274
NPPCNTL++GNL E+ELR LFS+Q GF+++ + + +CF+EFED + A
Sbjct: 455 NPPCNTLYVGNLPPDATEQELRQLFSSQQGFRRLSFRNKNSNGNGHGPMCFVEFEDASFA 514
Query: 275 SSVHHNLQGAVIPS---SGSVGMRIQY 298
+ L G+ +P S G+R+ +
Sbjct: 515 TVALAELYGSQLPRSTVSNKGGIRLSF 541
>gi|148529834|gb|ABQ82149.1| RNA binding protein with multiple splicing 2, partial [Equus
caballus]
Length = 177
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 43/76 (56%)
Query: 53 FITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIF 112
F++GLP D+K REL L R GYE S + +P+GF +F + A AAK+AL + F
Sbjct: 1 FVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSRQPVGFVIFDSRAGAEAAKNALNGIRF 60
Query: 113 DAETKSVLHTEMAKKN 128
D E L E AK N
Sbjct: 61 DPENPQTLRLEFAKAN 76
>gi|401623965|gb|EJS42043.1| whi3p [Saccharomyces arboricola H-6]
Length = 664
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 12/90 (13%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT--------VCFIEFEDV 271
NPPCNTL++GNL E+ELR LFS Q GF+++ R + T +CF+EF+DV
Sbjct: 537 NPPCNTLYVGNLPSDATEQELRQLFSGQEGFRRLS-FRNKNTTSNGHSHGPMCFVEFDDV 595
Query: 272 NSASSVHHNLQGAVIPS---SGSVGMRIQY 298
+ A+ L G +P S G+R+ +
Sbjct: 596 SFATRALAELYGRQLPRSTVSSKGGIRLSF 625
>gi|238605839|ref|XP_002396559.1| hypothetical protein MPER_03182 [Moniliophthora perniciosa FA553]
gi|215469352|gb|EEB97489.1| hypothetical protein MPER_03182 [Moniliophthora perniciosa FA553]
Length = 362
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 15/92 (16%)
Query: 220 NPPCNTLFIGNLGES----------INEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFE 269
NPP NTL++GNL S I EE LR LF +PGF+++ ++ +CF+EFE
Sbjct: 152 NPPINTLYVGNLPTSPPPMGYHSPDILEESLRELFRLRPGFRRLSFKQKNSGPMCFVEFE 211
Query: 270 DVNSASSVHHNLQGAVIPSSGSV---GMRIQY 298
DV++AS + L G + +G V G+R+ Y
Sbjct: 212 DVSAASKTMNELSGNTL--NGLVKGQGIRLSY 241
>gi|393246120|gb|EJD53629.1| hypothetical protein AURDEDRAFT_110433 [Auricularia delicata
TFB-10046 SS5]
Length = 734
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 196 PVQMPAPA-PVPAPSSYVPVQN-----TKDNPPCNTLFIGNLGESIN--------EEELR 241
P+ P PA PV SS N T NPP NTL++GNL S EE LR
Sbjct: 448 PMSPPQPASPVSGGSSVTTNANMRPNVTDQNPPINTLYVGNLPTSPPPGYPPNQLEESLR 507
Query: 242 GLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
LF PGF+++ ++ +CF+EFEDV AS +L G + G+R+ Y
Sbjct: 508 MLFQRCPGFRKLCFRQKSNGPMCFVEFEDVQYASRAMQDLYGDTLNGLVKNGIRLSY 564
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 29/47 (61%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGI 135
+GFA F T A+ A+D LQ D E +VL EMAKKNL KRG+
Sbjct: 102 IGFAKFKTRAEALEARDVLQGKRIDIEKGAVLKAEMAKKNLHTKRGV 148
>gi|195444819|ref|XP_002070044.1| GK11234 [Drosophila willistoni]
gi|194166129|gb|EDW81030.1| GK11234 [Drosophila willistoni]
Length = 571
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFALFSTAQLAV 101
+EVRT+F++GLP D K REL L R GYE S + N K P+GF F T A
Sbjct: 26 EEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAE 85
Query: 102 AAKDALQEMI-FDAETKSVLHTEMAKKNLFVKR 133
AAK LQ+ + FD + + E AK N V +
Sbjct: 86 AAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 118
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 50/129 (38%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT----------------- 262
N PC+TLF+ NLG+ ++E EL+ +FS+ PGF ++++ + H
Sbjct: 274 NAPCSTLFVANLGQFVSEHELKEVFSSMPGFCRLRMHTKGMHQITTSTLPLTLSSTATKS 333
Query: 263 ---------------------------------VCFIEFEDVNSASSVHHNLQGAVIPSS 289
V FIEF+D SA+ +LQG + SS
Sbjct: 334 TSTSYSSIITNANANANANIVDSASSNTNGTSPVAFIEFKDAPSAAQAMQHLQGKYLLSS 393
Query: 290 GSVGMRIQY 298
+RI+Y
Sbjct: 394 DRGSIRIEY 402
>gi|328702215|ref|XP_001952194.2| PREDICTED: protein couch potato-like [Acyrthosiphon pisum]
Length = 295
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 107/247 (43%), Gaps = 45/247 (18%)
Query: 35 PVPYDNTNRIAHDE----VRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKG 85
P+ D + R +E VRT+F++GLP D K REL L R GYE S + N K
Sbjct: 38 PLKEDYSLRQKKNEKKLLVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKT 97
Query: 86 EKPMGFALFSTAQLAVAAKDALQEMI-FDAETKSVLHTEMAKKNLFVKR-GIVADTNAYD 143
P+GF F T A AAK LQ+ + FD + + E AK N V + A+ N
Sbjct: 98 ASPVGFVTFQTRAGAEAAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSKPKQPANANVTP 157
Query: 144 QSKRLRTGGDYTHTGYSAPSPFHAPPAPVWG-----------------PHGYMAPP---P 183
+ + G + TG+ F PA +W H + P P
Sbjct: 158 NTHQ---GLMHPLTGHLGAPFFTGAPAELWHHPLAYADMPTAATATALQHAALVHPGLHP 214
Query: 184 PPYDP---YGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEEL 240
P P G +G+P + PA P PPC+TLF+ NLG+ +++ EL
Sbjct: 215 HPQQPTLTLGPHGLPFLPSPALPSPPNQQQ--------PQPPCSTLFVANLGQFVSDHEL 266
Query: 241 RGLFSAQ 247
+ +F+ +
Sbjct: 267 KDIFARE 273
>gi|194743840|ref|XP_001954408.1| GF16747 [Drosophila ananassae]
gi|190627445|gb|EDV42969.1| GF16747 [Drosophila ananassae]
Length = 141
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Query: 39 DNTNRIAHDE-VRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFA 92
D+ N +++E VRT+F++GLP D K REL L R GYE S + N K P+GF
Sbjct: 17 DSVNTASNEEEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFV 76
Query: 93 LFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
F T A AAK LQ + FD + + E AK N V +
Sbjct: 77 TFHTRAGAEAAKQDLQGVRFDPDMPQTIRLEFAKSNTKVSK 117
>gi|146421882|ref|XP_001486884.1| hypothetical protein PGUG_00261 [Meyerozyma guilliermondii ATCC
6260]
Length = 589
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 17/103 (16%)
Query: 213 PVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT---------- 262
P NPPCNTL++GNL E ELR LF Q GF+++ + + +
Sbjct: 445 PANPADQNPPCNTLYVGNLPPDATEAELRALFLPQKGFRRLSFRTKNQSSAGPSSATSHN 504
Query: 263 ---VCFIEFEDVNSASSVHHNLQGAVIP----SSGSVGMRIQY 298
+CF+EFEDV A+ L G +P S+G G+R+ +
Sbjct: 505 HGPMCFVEFEDVAHATRALAELYGRALPRPNGSNGKGGIRLSF 547
>gi|299748154|ref|XP_001837498.2| hypothetical protein CC1G_01410 [Coprinopsis cinerea okayama7#130]
gi|298407840|gb|EAU84414.2| hypothetical protein CC1G_01410 [Coprinopsis cinerea okayama7#130]
Length = 935
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 61/162 (37%), Gaps = 68/162 (41%)
Query: 42 NRIAHDEVRTIFITGLPDDVKERELQNL--------------------------LRWLPG 75
N +E+ TIF+ G P+D++ERE QN+ LR PG
Sbjct: 184 NTANQEEISTIFVVGFPEDMQEREFQNMFTFSAGFEAATLKIPNKEYTAYGANALRGFPG 243
Query: 76 YEASQ-------VNYKG-----------------------------------EKPMGFAL 93
Y S VN G ++ +GFA
Sbjct: 244 YNGSNDPYNLVTVNQGGVVVDNGRDGTMSSWPAVVGDDGPGNHFVGVNLPPRKQIIGFAK 303
Query: 94 FSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGI 135
F + + A+ A+D LQ D E +VL EMAKKNL KRG+
Sbjct: 304 FKSREAALEARDVLQGRRVDIEKGAVLKAEMAKKNLHTKRGV 345
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 64/109 (58%), Gaps = 16/109 (14%)
Query: 205 VPAPSSYVPVQNTK----DNPPCNTLFIGNL-------GESIN--EEELRGLFSAQPGFK 251
+P+P+S Q TK NPP NTL++GNL G S + E+ +R LF AQPG++
Sbjct: 660 LPSPASGASSQGTKGAIDQNPPINTLYVGNLPAPSPSIGFSNDQLEDAIRQLFMAQPGYR 719
Query: 252 QMKVLRQERHT-VCFIEFEDVNSASSVHHNLQGAVIPS-SGSVGMRIQY 298
++ V RQ+ + +CF+EFEDV+ A+ + L G + S G+R+ Y
Sbjct: 720 RL-VFRQKNNGPMCFVEFEDVHFATRALNELYGHTLGGLVKSGGIRLSY 767
>gi|25012435|gb|AAN71324.1| RE20544p [Drosophila melanogaster]
Length = 194
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 39 DNTNRIAHDE-VRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFA 92
D+ N +++E VRT+F++GLP D K REL L R GYE S + N K P+GF
Sbjct: 17 DSVNTASNEEEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFV 76
Query: 93 LFSTAQLAVAAKDALQEMI-FDAETKSVLHTEMAKKNLFVKR 133
F T A AAK LQ+ + FD + + E AK N V +
Sbjct: 77 TFHTRAGAEAAKQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 118
>gi|366995285|ref|XP_003677406.1| hypothetical protein NCAS_0G01660 [Naumovozyma castellii CBS 4309]
gi|342303275|emb|CCC71053.1| hypothetical protein NCAS_0G01660 [Naumovozyma castellii CBS 4309]
Length = 585
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 24/103 (23%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT----------------- 262
NPPCNTL++GNL E+ELR LFS QPGFK++ +
Sbjct: 436 NPPCNTLYVGNLPADCTEQELRLLFSNQPGFKRLSFRIKNSKLNPSSSNTNASIMPSSSA 495
Query: 263 ----VCFIEFEDVNSASSVHHNLQGAVIP---SSGSVGMRIQY 298
+CF+EFED++ A+ L GA +P +S G+R+ +
Sbjct: 496 AHGPMCFVEFEDISYATMALAELYGAQLPRATTSTKGGIRLSF 538
>gi|302696611|ref|XP_003037984.1| hypothetical protein SCHCODRAFT_255020 [Schizophyllum commune H4-8]
gi|300111681|gb|EFJ03082.1| hypothetical protein SCHCODRAFT_255020 [Schizophyllum commune H4-8]
Length = 845
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 12/89 (13%)
Query: 220 NPPCNTLFIGNLGESIN-------EEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVN 272
NPP NTL++GNL S+ E+ L+ LF+AQPG++++ ++ +CF+EFEDV+
Sbjct: 624 NPPINTLYVGNLPSSVTGHPPEHLEDSLKALFAAQPGYRRLCFRQKSNGPMCFVEFEDVS 683
Query: 273 SASSVHHNLQGAVIPSSGSV---GMRIQY 298
A+ ++L G + G V G+R+ Y
Sbjct: 684 FATKALNDLYGHTL--DGLVKAPGIRLSY 710
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 35/56 (62%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQ 144
+GFA F T + A++A+DALQ D E SVL EMAKKNL KRG+ T Y Q
Sbjct: 296 IGFAKFRTREEAISARDALQGRRVDMEKGSVLKAEMAKKNLHTKRGVGIGTTGYSQ 351
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 22 PPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV 81
PP +AA PPP + H+E+ TIF+ G PDD++ERE QN+ + G+EA+ +
Sbjct: 164 PPHGSAAQHPPPTG---QQQGPVQHEEISTIFVVGFPDDMQEREFQNMFTFSSGFEAATL 220
>gi|365988166|ref|XP_003670914.1| hypothetical protein NDAI_0F03530 [Naumovozyma dairenensis CBS 421]
gi|343769685|emb|CCD25671.1| hypothetical protein NDAI_0F03530 [Naumovozyma dairenensis CBS 421]
Length = 640
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 18/97 (18%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT---------------VC 264
NPPCNTL++GNL E+ELR LFS Q GFK++ + ++ +C
Sbjct: 481 NPPCNTLYVGNLPVDCTEQELRQLFSTQEGFKRLSFRVKNNNSNNVMLSNSNSAAHGPMC 540
Query: 265 FIEFEDVNSASSVHHNLQGAVIPS---SGSVGMRIQY 298
F+EFED+ A+ L G +P S G+R+ +
Sbjct: 541 FVEFEDIAYATKALAELYGTQLPRATPSNKGGIRLSF 577
>gi|443900067|dbj|GAC77394.1| casein kinase [Pseudozyma antarctica T-34]
Length = 1263
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 15/114 (13%)
Query: 195 PPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESIN-------EEELRGLFSAQ 247
PP Q P+P +P+P+ V + ++PP NTLF+GNL + + E++LR +FS+
Sbjct: 881 PPQQAPSPD-LPSPTGRNVVGD--NHPPVNTLFVGNLPSNASSAVLSQIEDQLRAVFSSC 937
Query: 248 PGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSV---GMRIQY 298
GF+Q + +CF+EFEDV++AS L G + G++ G+R+ +
Sbjct: 938 RGFRQFSFRLKSNGPMCFVEFEDVHTASKAMSELNGHSL--GGAIKNGGIRLSF 989
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 28/45 (62%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
+GFA F T A+ A+DAL DAE VL TEMAKKNL K+
Sbjct: 546 IGFAKFRTRADALEARDALNGRKVDAEKGCVLKTEMAKKNLHTKQ 590
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV 81
+E+ T+FI G PDD+ ERE N+ + G+EAS +
Sbjct: 415 EEITTVFIVGFPDDMSEREFANMFLFAKGFEASTL 449
>gi|255731644|ref|XP_002550746.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131755|gb|EER31314.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 665
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 17/96 (17%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT-------------VCFI 266
NPPCNTL++GNL E ELR LFS Q GF+++ + + + +CF+
Sbjct: 519 NPPCNTLYVGNLPPDATEAELRTLFSPQKGFRRLSFRTKNQSSTNGSGSTSHNHGPMCFV 578
Query: 267 EFEDVNSASSVHHNLQGAVIP----SSGSVGMRIQY 298
EFEDV A+ L G+ +P +G G+R+ +
Sbjct: 579 EFEDVAHATRALAELYGSALPRPNGGNGKGGIRLSF 614
>gi|449513275|ref|XP_004175808.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like, partial
[Taeniopygia guttata]
Length = 99
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 197 VQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVL 256
Q A AP P + VP DNPP LF+ NL E NE L LF+ PGFK+++++
Sbjct: 3 TQNSASAPGTTPQNQVP-----DNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV 57
Query: 257 RQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
R + F+EFE+ N A + LQG IP S + M+I Y
Sbjct: 58 -PGRQDIAFVEFENENQAGAARDALQGFKIPPSHA--MKITY 96
>gi|449280001|gb|EMC87413.1| U2 small nuclear ribonucleoprotein B'' [Columba livia]
Length = 226
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 197 VQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVL 256
+Q P AP + Q DNPP LF+ NL E NE L LF+ PGFK+++++
Sbjct: 125 IQGATPNSASAPGTAAQNQQVPDNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV 184
Query: 257 RQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
RH + F+EFE+ N A + LQG I S + M+I Y
Sbjct: 185 -PGRHDIAFVEFENENQAGAARDALQGFKITPSHA--MKITY 223
>gi|45185072|ref|NP_982789.1| ABL158Cp [Ashbya gossypii ATCC 10895]
gi|44980708|gb|AAS50613.1| ABL158Cp [Ashbya gossypii ATCC 10895]
gi|374105991|gb|AEY94901.1| FABL158Cp [Ashbya gossypii FDAG1]
Length = 729
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 15/116 (12%)
Query: 193 GVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQ 252
G+ V + A VP P++ NPPCNTL++GNL E+ELR LFS+Q GF++
Sbjct: 581 GISQVDLSLLAKVPPPANPA-----DQNPPCNTLYVGNLPPDATEQELRQLFSSQKGFRR 635
Query: 253 MKVLRQERHT-----VCFIEFEDVNSASSVHHNLQGAVIPSSGSV-----GMRIQY 298
+ + + +CF+EFEDV A+ L G+ + + G+R+ +
Sbjct: 636 LSFRNKNNNGNGHGPMCFVEFEDVAHATRALAELYGSQLARTSGTHNNKGGIRLSF 691
>gi|358332433|dbj|GAA51094.1| protein couch potato, partial [Clonorchis sinensis]
Length = 413
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFALFSTAQLAVA 102
+VRTIF++GLP D K REL L R GY++S + N K P+GF F + + A
Sbjct: 80 QVRTIFVSGLPLDAKPRELYLLFRGFKGYQSSTLKPAGKNGKPTAPVGFVTFDSREQAED 139
Query: 103 AKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
A LQ + FD E ++ E A+ N V +
Sbjct: 140 AMRKLQGVKFDPEGNQLMRLEFARTNTKVTK 170
>gi|294658856|ref|XP_461195.2| DEHA2F19514p [Debaryomyces hansenii CBS767]
gi|202953439|emb|CAG89583.2| DEHA2F19514p [Debaryomyces hansenii CBS767]
Length = 529
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 17/96 (17%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT-------------VCFI 266
NPPCNTL++GNL E ELR LFS Q GF+++ + + + +CF+
Sbjct: 389 NPPCNTLYVGNLPPDATESELRALFSPQKGFRRLSFRTKNQSSSNPNQSSNHNHGPMCFV 448
Query: 267 EFEDVNSASSVHHNLQGAVIP----SSGSVGMRIQY 298
EFEDV A+ L G +P S+G G+R+ +
Sbjct: 449 EFEDVAHATRALAELYGRTLPRSGGSNGKGGIRLSF 484
>gi|401881585|gb|EJT45883.1| cell wall integrity protein scw1 [Trichosporon asahii var. asahii
CBS 2479]
Length = 308
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 219 DNPPCNTLFIGNLGE--------SINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFED 270
NPP NTL+IGNL + EE LR LF +PGFK+M ++ +CF+EFED
Sbjct: 6 QNPPINTLYIGNLPAISPPTHPPNFLEESLRALFQRRPGFKRMSFRQKINGPMCFVEFED 65
Query: 271 VNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+ A+ L G + G+R+ Y
Sbjct: 66 IPYATQAMRELYGNTLSGLVKGGIRLSY 93
>gi|19075222|ref|NP_587722.1| RNA-binding protein Mde7 [Schizosaccharomyces pombe 972h-]
gi|74676013|sp|O59784.1|MDE7_SCHPO RecName: Full=RNA-binding protein mde7; AltName:
Full=Mei4-dependent protein 7
gi|2995369|emb|CAA18309.1| RNA-binding protein Mde7 [Schizosaccharomyces pombe]
Length = 761
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 217 TKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASS 276
T N PCNT+++GNL E++LR FS + G++++ + +CF+EFE+V A+
Sbjct: 595 TDHNSPCNTIYVGNLSNPDQEKKLRLAFSKEKGYRRLCFKIKGNSPMCFVEFEEVCHAAK 654
Query: 277 VHHNLQGAVIPSSGSVGMRIQY 298
+QGA + G+R+ Y
Sbjct: 655 AMEKMQGAALDDKIKGGIRLSY 676
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 45 AHDEVRTIFIT---GLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAV 101
++D++ + I GLPDD +REL + + GY+ S++ + F A A+
Sbjct: 212 SNDDLESSIIQIVGGLPDDFDDRELSGIFTFCEGYDFSKIESENGHRKAIVYFRNAIAAL 271
Query: 102 AAKDAL 107
AK+ L
Sbjct: 272 KAKNML 277
>gi|449495575|ref|XP_004176204.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Taeniopygia
guttata]
Length = 225
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 197 VQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVL 256
Q A AP P + VP DNPP LF+ NL E NE L LF+ PGFK+++++
Sbjct: 129 TQNSASAPGTTPQNQVP-----DNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV 183
Query: 257 RQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
RH + F+EFE+ N A + LQG I S + M+I Y
Sbjct: 184 -PGRHDIAFVEFENENQAGAARDALQGFKITPSHA--MKITY 222
>gi|406696600|gb|EKC99882.1| cell wall integrity protein scw1 [Trichosporon asahii var. asahii
CBS 8904]
Length = 926
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 220 NPPCNTLFIGNLGE--------SINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDV 271
NPP NTL+IGNL + EE LR LF +PGFK+M ++ +CF+EFED+
Sbjct: 625 NPPINTLYIGNLPAISPPTHPPNFLEESLRALFQRRPGFKRMSFRQKINGPMCFVEFEDI 684
Query: 272 NSASSVHHNLQGAVIPSSGSVGMRIQY 298
A+ L G + G+R+ Y
Sbjct: 685 PYATQAMRELYGNTLSGLVKGGIRLSY 711
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 30/53 (56%)
Query: 86 EKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVAD 138
+ +GFA F T A+AA+D LQ D T + L EMAKKNL KRG D
Sbjct: 356 RQTIGFARFKTRNDAIAARDHLQGRRIDPLTGATLKAEMAKKNLHTKRGQTND 408
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY---KGEKPMGFALFSTAQ 98
+ TIF+ G PDD+ ERE QN+ + G+EA+ + + +P AL S Q
Sbjct: 230 ISTIFVVGFPDDMSEREFQNIFAFAQGFEAATLKFPSGSRREPQAAALLSELQ 282
>gi|449512082|ref|XP_002199484.2| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Taeniopygia
guttata]
Length = 221
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 197 VQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVL 256
Q A AP P + VP DNPP LF+ NL E NE L LF+ PGFK+++++
Sbjct: 125 TQNSASAPGTTPQNQVP-----DNPPDYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV 179
Query: 257 RQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
RH + F+EFE+ N A + LQG I S + M+I Y
Sbjct: 180 -PGRHDIAFVEFENENQAGAARDALQGFKITPSHA--MKITY 218
>gi|150865889|ref|XP_001385283.2| Protein involved in regulation of cell size putative RNA binding
protein [Scheffersomyces stipitis CBS 6054]
gi|149387145|gb|ABN67254.2| Protein involved in regulation of cell size putative RNA binding
protein [Scheffersomyces stipitis CBS 6054]
Length = 732
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 19/98 (19%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT---------------VC 264
NPPCNTL++GNL E ELR LFS Q GF+++ + + + +C
Sbjct: 583 NPPCNTLYVGNLPPDATEAELRALFSPQKGFRRLSFRTKNQSSGTSGSSGTSGHNHGPMC 642
Query: 265 FIEFEDVNSASSVHHNLQGAVIP----SSGSVGMRIQY 298
F+EFEDV A+ L G +P +G G+R+ +
Sbjct: 643 FVEFEDVAHATRALAELYGRALPRPNGGNGKGGIRLSF 680
>gi|390601674|gb|EIN11068.1| hypothetical protein PUNSTDRAFT_51626 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 802
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 17/109 (15%)
Query: 205 VPAPSSYVPVQN---TKDNPPCNTLFIGNLGESIN---------EEELRGLFSAQPGFKQ 252
+P+P+S N NPP NTL++GNL S E+ LR LFS QPGF++
Sbjct: 567 LPSPTSNASSGNRNAADQNPPINTLYVGNLPASPTQAGYPSSHLEDGLRDLFSQQPGFRK 626
Query: 253 MKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSV---GMRIQY 298
+ ++ +CF+EFEDV+ A+ ++L G + +G V G+R+ Y
Sbjct: 627 LCYRQKSNGPMCFVEFEDVSYATKALNDLYGNTV--NGLVKAGGIRLSY 673
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 32/47 (68%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGI 135
+GFA FST A+AA+D LQ DAE +VL EMAKKNL KRG+
Sbjct: 209 IGFAKFSTRSEALAARDVLQGRRVDAEKGAVLKAEMAKKNLHTKRGV 255
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 9 YHQQWPPAPAPPPPPAAAAAAPPPPPPVPYDNTNR-IAHDEVRTIFITGLPDDVKERELQ 67
YH Q P P P +AA + P V + + + + +E+ TIF+ G PDD++ERE Q
Sbjct: 56 YHSQTPFGPHLPANGSAAGGSVLSAPTVSHVSGGQGSSQEEISTIFVVGFPDDMQEREFQ 115
Query: 68 NLLRWLPGYEASQV 81
N+ + PG+EA+ +
Sbjct: 116 NMFTFSPGFEAATL 129
>gi|363754827|ref|XP_003647629.1| hypothetical protein Ecym_6441 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891266|gb|AET40812.1| hypothetical protein Ecym_6441 [Eremothecium cymbalariae
DBVPG#7215]
Length = 689
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 10/99 (10%)
Query: 193 GVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQ 252
G+ V + A VP P++ NPPCNTL++GNL E+ELR LFS+Q GF++
Sbjct: 541 GISQVDLSLLAKVPPPANPA-----DQNPPCNTLYVGNLPPDATEQELRQLFSSQKGFRR 595
Query: 253 MKVLRQERHT-----VCFIEFEDVNSASSVHHNLQGAVI 286
+ + + +CF+EFEDV A+ L G+ +
Sbjct: 596 LSFRNKNNNGNGHGPMCFVEFEDVAHATRALAELYGSQL 634
>gi|71021503|ref|XP_760982.1| hypothetical protein UM04835.1 [Ustilago maydis 521]
gi|46101057|gb|EAK86290.1| hypothetical protein UM04835.1 [Ustilago maydis 521]
Length = 1001
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 64/114 (56%), Gaps = 14/114 (12%)
Query: 195 PPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESIN-------EEELRGLFSAQ 247
PP QMP+P +P+P+ V ++PP NTLF+GNL + + E++LR +FS+
Sbjct: 826 PPQQMPSP-DLPSPTGGRNVVG-DNHPPVNTLFVGNLPSNASSAVLSQIEDQLRAVFSSC 883
Query: 248 PGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSV---GMRIQY 298
GF+Q + +CF+EF DV++AS L G + G++ G+R+ +
Sbjct: 884 RGFRQFSFRLKSNGPMCFVEFGDVHTASQAMSELNGHSL--GGAIKNGGIRLSF 935
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 28/45 (62%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
+GFA F T A+ A+DAL DA+ VL TEMAKKNL K+
Sbjct: 504 IGFAKFRTRADALEARDALNGRKVDADKGCVLKTEMAKKNLHTKQ 548
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFA 92
+E+ T+FI G PDD+ ERE N+ + G+EAS + P GF
Sbjct: 361 EEITTVFIVGFPDDMSEREFANMFLFAKGFEASTLKI----PAGFG 402
>gi|349576861|dbj|GAA22030.1| K7_Whi4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 649
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 12/79 (15%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT-----------VCFIEF 268
NPPCNTL++GNL E+ELR LFS Q GF+++ R + ++ +CF+EF
Sbjct: 529 NPPCNTLYVGNLPPDATEQELRQLFSNQQGFRRLS-FRNKMNSHGHGNGHGHGPICFVEF 587
Query: 269 EDVNSASSVHHNLQGAVIP 287
EDV+ A+ L G+ +P
Sbjct: 588 EDVSFATRALAELYGSQLP 606
>gi|323338486|gb|EGA79710.1| Whi4p [Saccharomyces cerevisiae Vin13]
Length = 649
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 12/79 (15%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT-----------VCFIEF 268
NPPCNTL++GNL E+ELR LFS Q GF+++ R + ++ +CF+EF
Sbjct: 529 NPPCNTLYVGNLPPDATEQELRQLFSNQQGFRRLS-FRNKMNSHGHGNGHGHGPICFVEF 587
Query: 269 EDVNSASSVHHNLQGAVIP 287
EDV+ A+ L G+ +P
Sbjct: 588 EDVSFATRALAELYGSQLP 606
>gi|6319977|ref|NP_010057.1| Whi4p [Saccharomyces cerevisiae S288c]
gi|74676444|sp|Q07655.1|WHI4_YEAST RecName: Full=Protein WHI4
gi|1431377|emb|CAA98803.1| WHI4 [Saccharomyces cerevisiae]
gi|207347167|gb|EDZ73442.1| YDL224Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270998|gb|EEU06112.1| Whi4p [Saccharomyces cerevisiae JAY291]
gi|259145798|emb|CAY79061.1| Whi4p [Saccharomyces cerevisiae EC1118]
gi|285810817|tpg|DAA11641.1| TPA: Whi4p [Saccharomyces cerevisiae S288c]
gi|323305765|gb|EGA59504.1| Whi4p [Saccharomyces cerevisiae FostersB]
gi|323349375|gb|EGA83599.1| Whi4p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355917|gb|EGA87728.1| Whi4p [Saccharomyces cerevisiae VL3]
gi|365761695|gb|EHN03332.1| Whi4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392300090|gb|EIW11181.1| Whi4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 649
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 12/79 (15%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT-----------VCFIEF 268
NPPCNTL++GNL E+ELR LFS Q GF+++ R + ++ +CF+EF
Sbjct: 529 NPPCNTLYVGNLPPDATEQELRQLFSNQQGFRRLS-FRNKMNSHGHGNGHGHGPICFVEF 587
Query: 269 EDVNSASSVHHNLQGAVIP 287
EDV+ A+ L G+ +P
Sbjct: 588 EDVSFATRALAELYGSQLP 606
>gi|392579952|gb|EIW73079.1| hypothetical protein TREMEDRAFT_70892 [Tremella mesenterica DSM
1558]
Length = 892
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 219 DNPPCNTLFIGNLGE--------SINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFED 270
NPP NTL++GNL + EE LRGLFS GFK+M ++ +CF+EFED
Sbjct: 602 QNPPINTLYVGNLPAISPPTHPPNFLEEALRGLFSRSAGFKRMSFRQKINGPMCFVEFED 661
Query: 271 VNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+ A+ L G + G+R+ Y
Sbjct: 662 IPYAAQAIQELYGHTLGGLVKGGIRLSY 689
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY 83
+ TIF+ G PDD++ERE NL + PG+EA+ + +
Sbjct: 225 ISTIFVVGFPDDMQEREFANLFTFAPGFEAATLKF 259
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 86 EKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
+ +GFA F + A++AK+ LQ D T + L EMAKKNL KR
Sbjct: 345 RQTIGFARFRSRADALSAKEHLQGRRIDVLTGATLKAEMAKKNLHTKR 392
>gi|151941784|gb|EDN60140.1| whiskey [Saccharomyces cerevisiae YJM789]
Length = 649
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 12/79 (15%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT-----------VCFIEF 268
NPPCNTL++GNL E+ELR LFS Q GF+++ R + ++ +CF+EF
Sbjct: 529 NPPCNTLYVGNLPPDATEQELRQLFSNQQGFRRLS-FRNKMNSHGHGNGHGHGPICFVEF 587
Query: 269 EDVNSASSVHHNLQGAVIP 287
EDV+ A+ L G+ +P
Sbjct: 588 EDVSFATRALAELYGSQLP 606
>gi|403416660|emb|CCM03360.1| predicted protein [Fibroporia radiculosa]
Length = 1274
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 14/91 (15%)
Query: 220 NPPCNTLFIGNL-------GESIN--EEELRGLFSAQPGFKQMKVLRQERHTVCFIEFED 270
NPP NTL++GNL G +N E+ LR LFS +PG++++ ++ +CF+EFED
Sbjct: 1037 NPPINTLYVGNLPTSPAPGGFPLNYLEDRLRDLFSKRPGYRKLCFRQKSNGPMCFVEFED 1096
Query: 271 VNSASSVHHNLQGAVIPSSGSV---GMRIQY 298
VN A+ + L G + +G V G+R+ Y
Sbjct: 1097 VNYATKALNELYGNTL--NGLVKGGGIRLSY 1125
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 29/46 (63%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRG 134
+GFA F T Q A+ A+D LQ D E +VL EMAKKNL KRG
Sbjct: 638 IGFAKFRTRQEALEARDILQGRRVDIERGAVLKAEMAKKNLHTKRG 683
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 40 NTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV 81
NT +E+ TIF+ G P+D++ERE QN+ + PG+EA+ +
Sbjct: 516 NTQAQQQEEISTIFVVGFPEDMQEREFQNMFTFSPGFEAATL 557
>gi|403218363|emb|CCK72854.1| hypothetical protein KNAG_0L02390 [Kazachstania naganishii CBS
8797]
Length = 608
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 17/96 (17%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTV--------------CF 265
NPPCNTL++GNL E+ELR LF Q GF+++ + V CF
Sbjct: 493 NPPCNTLYVGNLPSDATEQELRQLFGGQQGFRRLSFKNKNPTNVHGHGHSHGHGHGPMCF 552
Query: 266 IEFEDVNSASSVHHNLQGAVIPSS---GSVGMRIQY 298
+EFED++ A+ +L G+ +P + G+R+ +
Sbjct: 553 VEFEDISFATRALADLYGSQLPRTTVYSKGGIRLSF 588
>gi|194900318|ref|XP_001979704.1| GG22582 [Drosophila erecta]
gi|190651407|gb|EDV48662.1| GG22582 [Drosophila erecta]
Length = 745
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFALFSTAQLAVAA 103
VRT+F++GLP D K REL L R GYE S + N K P+GF F T A AA
Sbjct: 63 VRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAA 122
Query: 104 KDALQEMI-FDAETKSVLHTEMAKKNLFVKR 133
K LQ+ + FD + + E AK N V +
Sbjct: 123 KQDLQQGVRFDPDMPQTIRLEFAKSNTKVSK 153
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 31/42 (73%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERH 261
N PC+TLF+ NLG+ ++E EL+ +FS+ PGF ++++ + H
Sbjct: 318 NAPCSTLFVANLGQFVSEHELKEVFSSMPGFCRLRMHTKGTH 359
>gi|320580822|gb|EFW95044.1| hypothetical protein HPODL_3416 [Ogataea parapolymorpha DL-1]
Length = 602
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 17/95 (17%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT----------VCFIEFE 269
NPPCNTL++GNL E ELR LF Q GF+++ R +++T +CF+EFE
Sbjct: 445 NPPCNTLYVGNLPPDATELELRTLFQPQKGFRRLS-FRTKQNTGNGSSSHHGPMCFVEFE 503
Query: 270 DVNSASSVHHNLQGAVIP------SSGSVGMRIQY 298
DV A+ L G +P S+ G+R+ +
Sbjct: 504 DVAYATRALAELYGRTLPRANGSTSNNKGGIRLSF 538
>gi|401626491|gb|EJS44435.1| whi4p [Saccharomyces arboricola H-6]
Length = 649
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 10/78 (12%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT----------VCFIEFE 269
NPPCNTL++GNL E+ELR LFS Q GF+++ + +CF+EFE
Sbjct: 529 NPPCNTLYVGNLPPDATEQELRQLFSNQQGFRRLSFRNKMNSHGHGSGHGHGPICFVEFE 588
Query: 270 DVNSASSVHHNLQGAVIP 287
DV+ A+ L G+ +P
Sbjct: 589 DVSFATRALAELYGSQLP 606
>gi|410080362|ref|XP_003957761.1| hypothetical protein KAFR_0F00290 [Kazachstania africana CBS 2517]
gi|372464348|emb|CCF58626.1| hypothetical protein KAFR_0F00290 [Kazachstania africana CBS 2517]
Length = 680
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 10/89 (11%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQE-------RHTVCFIEFEDVN 272
NPPCNTL++GNL E+ELR LFS+Q GF+++ + +CF+EF+DV+
Sbjct: 552 NPPCNTLYVGNLPPDATEQELRQLFSSQEGFRRLSFKNKSIPGHGHGHGPMCFVEFDDVS 611
Query: 273 SASSVHHNLQGAVIPSS---GSVGMRIQY 298
++ L G+ +P S G+R+ +
Sbjct: 612 FSTRALAKLYGSQLPRSTINSKGGIRLSF 640
>gi|444315532|ref|XP_004178423.1| hypothetical protein TBLA_0B00600 [Tetrapisispora blattae CBS 6284]
gi|387511463|emb|CCH58904.1| hypothetical protein TBLA_0B00600 [Tetrapisispora blattae CBS 6284]
Length = 734
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 8/87 (9%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT-----VCFIEFEDVNSA 274
NPPCNTL++GNL E+ELR LFS Q GF+++ + + +CF+EFEDV+ A
Sbjct: 604 NPPCNTLYVGNLPPDATEQELRQLFSTQDGFRRLSFRNKNNNGNGHGPMCFVEFEDVSYA 663
Query: 275 SSVHHNLQGAVIPSSGSV---GMRIQY 298
+ L G+ + + + G+R+ +
Sbjct: 664 TRALAELYGSQLQRTTATNKGGIRLSF 690
>gi|148689095|gb|EDL21042.1| mCG15722 [Mus musculus]
Length = 281
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 116/277 (41%), Gaps = 38/277 (13%)
Query: 51 TIFITGLPDDVKERELQN--------LLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVA 102
TI+I L + +K+ EL+ + L + + +G+ F +F +
Sbjct: 11 TIYINSLNEKIKKDELKKSPYAIFSQFGQILDILVSQSLKMRGQ---SFVIFKEVSSTIN 67
Query: 103 AKDALQEMIFD--------AETKSVLHTEMAKKNLFVKRGIVADTNAYDQ------SKRL 148
A ++Q F A+T S + +M K FV+R + KRL
Sbjct: 68 ALRSMQGFPFYGKPMHIQYAKTDSDIIAKM--KGTFVERDHKREKRKPKSQEKPAAKKRL 125
Query: 149 RTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDPYGGY----GVPPVQMPAPAP 204
G G P P PP P + P PPY G G+PP Q+P+ A
Sbjct: 126 FRWGSAPVVGAVQPVP-GMPPMPQAPRVMHHMPGQPPYMRPPGMILPPGLPPGQIPSRAM 184
Query: 205 VPA---PSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERH 261
P P Q +NPP + LF+ NL E NE L LF+ PGFK+++++ RH
Sbjct: 185 PPQQLIPGQMPHAQPLSENPPNHILFLTNLPEETNELMLSMLFTQFPGFKEVRLV-PGRH 243
Query: 262 TVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+ F+EF++ A + LQG I + + M+I +
Sbjct: 244 DIDFVEFDNEVQAGAARDVLQGFKITQNNA--MKISF 278
>gi|406859405|gb|EKD12471.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 842
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 115/279 (41%), Gaps = 32/279 (11%)
Query: 28 AAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEAS---QVNYK 84
PPP ++N+ + + V P + LP E S Q +
Sbjct: 204 GGPPPRQASRFNNSFQASQPRVSPTSNGPYPSNE-----------LPNPENSAHYQSLFS 252
Query: 85 GEKPMGFALFSTAQLAVAAKDAL-QEMIFDAETKSVLHTEMAKKNLFVKRG-IVADTNAY 142
+ P+G L + + K + + + D ET +L + + + G I
Sbjct: 253 PQSPIGNHL--NERTRITGKSLINNDSVDDDETGELLKDPVG----YAEHGSIQGRRKTL 306
Query: 143 DQSKRLRTGGDYTHTGYSAP---SPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQM 199
Q R G T + P S A P P + M+PP G PPV
Sbjct: 307 PQLPISRMNGLSLSTNAAVPASISSTFATPTPHNIHNNTMSPPLTN-------GGPPVNY 359
Query: 200 PAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQE 259
+ ++ PV NPPCNTL++GNL +E+EL+ +FS Q G+K++ ++
Sbjct: 360 QLGSQHYQRHNFPPVNPADQNPPCNTLYVGNLPIDTSEDELKAMFSKQRGYKRLCFRTKQ 419
Query: 260 RHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+CF+EFEDV+ A+ H L G + +S G+R+ +
Sbjct: 420 NGPMCFVEFEDVSFATKALHELYGHPLHNSVKGGIRLSF 458
>gi|50288333|ref|XP_446595.1| hypothetical protein [Candida glabrata CBS 138]
gi|42557534|emb|CAE84437.1| putative Whi3 protein [Candida glabrata]
gi|49525903|emb|CAG59522.1| unnamed protein product [Candida glabrata]
Length = 671
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 7/75 (9%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT-------VCFIEFEDVN 272
NPPCNTL++GNL E+ELR LFS Q GF+++ + + +CF+EF+DV+
Sbjct: 540 NPPCNTLYVGNLPSDATEQELRQLFSNQFGFRRLSFRNKNANGTGHGHGPMCFVEFDDVS 599
Query: 273 SASSVHHNLQGAVIP 287
A+ L G+ +P
Sbjct: 600 CATRALVELYGSQLP 614
>gi|149057909|gb|EDM09152.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_c [Rattus norvegicus]
gi|149057914|gb|EDM09157.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_c [Rattus norvegicus]
gi|149057919|gb|EDM09162.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_c [Rattus norvegicus]
Length = 107
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AA
Sbjct: 18 LQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAA 77
Query: 104 KDAL 107
K+AL
Sbjct: 78 KNAL 81
>gi|406606818|emb|CCH41854.1| RNA-binding protein [Wickerhamomyces ciferrii]
Length = 558
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 21/100 (21%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER--------------HT--- 262
NPPCNTL++GNL E ELR LFS Q GF+++ + + H+
Sbjct: 434 NPPCNTLYVGNLPPDATEAELRQLFSPQRGFRRLSFRTKTQPLNGNGQLNSAGSSHSHGP 493
Query: 263 VCFIEFEDVNSASSVHHNLQGAVIPSSGSV----GMRIQY 298
+CF+EFEDV A+ L G +P G V G+R+ +
Sbjct: 494 MCFVEFEDVAYATRALAELYGRTLPRPGGVPGKGGIRLSF 533
>gi|164659532|ref|XP_001730890.1| hypothetical protein MGL_1889 [Malassezia globosa CBS 7966]
gi|159104788|gb|EDP43676.1| hypothetical protein MGL_1889 [Malassezia globosa CBS 7966]
Length = 649
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 54/135 (40%), Gaps = 48/135 (35%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY------------------------ 83
E+ T+F+ G P+D+ +RE N+ + G+EAS + Y
Sbjct: 191 EISTLFLAGFPEDITDREFSNMFLFAKGFEASMLKYPNTNAVQQLKPDEVEARRAADKRV 250
Query: 84 ------------------------KGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSV 119
K ++ +GFA FS + A+ A+D L D+E +
Sbjct: 251 SGPTGLGAEKEGAGRDASDPQPSPKSKQIIGFAKFSCREEALQARDVLNGFRIDSERGCI 310
Query: 120 LHTEMAKKNLFVKRG 134
L E+AKKNL KR
Sbjct: 311 LKAELAKKNLHTKRS 325
>gi|388857086|emb|CCF49301.1| related to WHI3-involved in regulation of cell size [Ustilago
hordei]
Length = 1030
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 19/116 (16%)
Query: 195 PPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESIN-------EEELRGLFSAQ 247
PP Q+P+P +P+P+ + ++PP NTLF+GNL + + E++LR +FS+
Sbjct: 856 PPPQVPSPD-LPSPTGRN--VHGDNHPPVNTLFVGNLPSNASSAVLSQIEDQLRAVFSSC 912
Query: 248 PGFKQMKVLRQERHTVCFIEFEDVNSASSV-----HHNLQGAVIPSSGSVGMRIQY 298
GF+Q + +CF+EFEDV +AS H+L GA+ + G+R+ +
Sbjct: 913 QGFRQFSFRLKSNGPMCFVEFEDVYTASKAMSELNGHSLGGAIK----NGGIRLSF 964
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 28/45 (62%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
+GFA F T A+ A+DAL DAE VL TEMAKKNL K+
Sbjct: 501 IGFAKFRTRTEALEARDALNGRKVDAEKGCVLKTEMAKKNLHTKQ 545
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV 81
+E+ T+FI G PDD+ ERE N+ + G+EAS +
Sbjct: 359 EEITTVFIVGFPDDMTEREFANMFLFAKGFEASTL 393
>gi|339260634|ref|XP_003368308.1| protein couch potato [Trichinella spiralis]
gi|316959609|gb|EFV47705.1| protein couch potato [Trichinella spiralis]
Length = 155
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEAS-----QVNYKGEKPMGFALFSTAQLAVAA 103
VRT+F++GLP D K REL L R GYE+S Q N K P+GF F++ A A
Sbjct: 1 VRTLFVSGLPIDAKPRELYLLFRAYKGYESSLLKVTQKNGKATTPIGFVTFNSRAAAEEA 60
Query: 104 KDALQEMIFDAETKSVLHTEMAKKN 128
K +LQ + FD E + E A+ N
Sbjct: 61 KQSLQGVKFDPELPQPIRLEFARSN 85
>gi|313221526|emb|CBY32273.1| unnamed protein product [Oikopleura dioica]
Length = 317
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 38 YDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGE-------KPMG 90
Y + +DEVRT+F++GLP DVK+REL+ L R G+E++ + + + P+
Sbjct: 68 YKSHESYQNDEVRTLFVSGLPSDVKQRELRLLFRPYKGFESAVLKFPQKPGKVYPIAPVA 127
Query: 91 FALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKN 128
F F + A K+ LQ FD + + L E AK N
Sbjct: 128 FVTFKSKAEAQVPKEELQGEKFDNDNPTTLRLEFAKSN 165
>gi|313232434|emb|CBY24102.1| unnamed protein product [Oikopleura dioica]
Length = 300
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGE-------KPMGFALFSTAQ 98
+DEVRT+F++GLP DVK+REL+ L R G+E++ + + + P+ F F +
Sbjct: 59 NDEVRTLFVSGLPSDVKQRELRLLFRPYKGFESAVLKFPQKPGKVYPIAPVAFVTFKSKA 118
Query: 99 LAVAAKDALQEMIFDAETKSVLHTEMAKKN 128
A K+ LQ FD + + L E AK N
Sbjct: 119 EAQVPKEELQGEKFDNDNPTTLRLEFAKSN 148
>gi|328352765|emb|CCA39163.1| Protein WHI4 [Komagataella pastoris CBS 7435]
Length = 496
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT---------VCFIEFED 270
NPPCNTL++GNL E ELR LF+ GF+++ + + +CF+EF
Sbjct: 378 NPPCNTLYVGNLPGDATEAELRSLFTPVKGFRRLSFKNKTSISGSSGGGGGPMCFVEFNS 437
Query: 271 VNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+ A+ NL G + S G+R+ +
Sbjct: 438 ITEAAEALANLYGTSLRCSSKGGIRLSF 465
>gi|254572223|ref|XP_002493221.1| RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci
[Komagataella pastoris GS115]
gi|238033019|emb|CAY71042.1| RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci
[Komagataella pastoris GS115]
Length = 497
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT---------VCFIEFED 270
NPPCNTL++GNL E ELR LF+ GF+++ + + +CF+EF
Sbjct: 379 NPPCNTLYVGNLPGDATEAELRSLFTPVKGFRRLSFKNKTSISGSSGGGGGPMCFVEFNS 438
Query: 271 VNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+ A+ NL G + S G+R+ +
Sbjct: 439 ITEAAEALANLYGTSLRCSSKGGIRLSF 466
>gi|47211375|emb|CAF89828.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 194 VPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQM 253
+P QM A VPA + P DNPP LF+ NL E NE L LF+ PGFK++
Sbjct: 114 LPANQMKKAAVVPAVPLHSPAAQVPDNPPNYILFLTNLPEETNEMMLSMLFNQFPGFKEV 173
Query: 254 KVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+++ +H + F+EFE A LQG I + + M+I +
Sbjct: 174 RLV-PGKHDIAFVEFESDLQAGVAKDALQGFRI--TATCAMKITF 215
>gi|327276255|ref|XP_003222885.1| PREDICTED: u1 small nuclear ribonucleoprotein A-like [Anolis
carolinensis]
Length = 280
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 10/106 (9%)
Query: 193 GVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQ 252
+PP QM P PVQ +NPP + LF+ NL E NE L LF+ PGFK+
Sbjct: 182 AMPPQQM-------LPGQMAPVQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKE 234
Query: 253 MKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
++++ RH + F+EF++ A + LQG I + + M+I +
Sbjct: 235 VRLV-PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNA--MKISF 277
>gi|284005979|gb|ADB57051.1| MIP15437p [Drosophila melanogaster]
Length = 299
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 29/108 (26%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQ--------------------- 258
N PC+TLF+ NLG+ ++E EL+ +FS+ PGF ++++ +
Sbjct: 47 NAPCSTLFVANLGQFVSEHELKEVFSSMPGFCRLRMHTKAMATATGSSCSTSNGSGSSSN 106
Query: 259 --------ERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
++H V FIEF+D +AS LQG + SS +RI++
Sbjct: 107 SNHNSAAVQQHPVAFIEFKDPPTASQAMQQLQGKYLLSSDRGSIRIEF 154
>gi|443927409|gb|ELU45901.1| RNA recognition domain-containing protein [Rhizoctonia solani AG-1
IA]
Length = 1372
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 217 TKDNPPCNTLFIGNL--------GESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIE- 267
+ NPP NTL++GNL S EE LRGLF+ PG++++ ++ +CF+E
Sbjct: 1071 SDQNPPINTLYVGNLPTASGQAHSPSYLEEALRGLFARTPGYRKLCFRQKSNGPMCFVEV 1130
Query: 268 -FEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
FEDVN A+ + + G + G+R+ +
Sbjct: 1131 NFEDVNYATKALNEMYGNTLNGLVKGGIRLSF 1162
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGI 135
+GFA F T Q A+ A+D LQ DAE + L EMAKKNL KRG+
Sbjct: 728 IGFAKFRTRQEALEARDVLQGRRVDAEKGAFLKAEMAKKNLHTKRGV 774
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAA 103
+ +E+ TIF+ G PDD+ ERE QN+ + G+EA+ + ++P G+ S Q + +
Sbjct: 587 VPQEEISTIFVVGFPDDMSEREFQNMFTFSSGFEAATLKIPNKEP-GYGGSSNGQ-GLTS 644
Query: 104 KDALQEMIF 112
+AL+ F
Sbjct: 645 ANALRSGAF 653
>gi|68469094|ref|XP_721334.1| hypothetical protein CaO19.6494 [Candida albicans SC5314]
gi|68470119|ref|XP_720821.1| hypothetical protein CaO19.13847 [Candida albicans SC5314]
gi|77022790|ref|XP_888839.1| hypothetical protein CaO19_6494 [Candida albicans SC5314]
gi|46442709|gb|EAL01996.1| hypothetical protein CaO19.13847 [Candida albicans SC5314]
gi|46443247|gb|EAL02530.1| hypothetical protein CaO19.6494 [Candida albicans SC5314]
gi|76573652|dbj|BAE44736.1| hypothetical protein [Candida albicans]
Length = 704
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 25/104 (24%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT----------------- 262
NPPCNTL++GNL E ELR LFS Q GF+++ + + +
Sbjct: 542 NPPCNTLYVGNLPPDATESELRTLFSPQKGFRRLSFRTKNQSSSNNGTGSGGGSGGGGGH 601
Query: 263 ----VCFIEFEDVNSASSVHHNLQGAVIP----SSGSVGMRIQY 298
+CF+EFEDV A+ L G +P +G G+R+ +
Sbjct: 602 SHGPMCFVEFEDVAHATRALAELYGRALPRPNGGNGKGGIRLSF 645
>gi|238883377|gb|EEQ47015.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 708
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 25/104 (24%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT----------------- 262
NPPCNTL++GNL E ELR LFS Q GF+++ + + +
Sbjct: 546 NPPCNTLYVGNLPPDATESELRTLFSPQKGFRRLSFRTKNQSSSNNGTGSGGGSGGGGGH 605
Query: 263 ----VCFIEFEDVNSASSVHHNLQGAVIP----SSGSVGMRIQY 298
+CF+EFEDV A+ L G +P +G G+R+ +
Sbjct: 606 SHGPMCFVEFEDVAHATRALAELYGRALPRPNGGNGKGGIRLSF 649
>gi|170091552|ref|XP_001876998.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648491|gb|EDR12734.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1370
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 14/91 (15%)
Query: 220 NPPCNTLFIGNLGES---------INEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFED 270
NPP NTL++GNL S EE LR LFS+ PGF+++ ++ +CF+EFED
Sbjct: 1090 NPPINTLYVGNLPTSPTPIGFPQDYLEESLRELFSSCPGFRRLCFRQKNNGPMCFVEFED 1149
Query: 271 VNSASSVHHNLQGAVIPSSGSV---GMRIQY 298
V A+ ++L G + G V G+R+ Y
Sbjct: 1150 VQYAAKALNDLYGNTL--KGLVKGGGIRLSY 1178
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGI 135
+GFA F + + A+ A+D LQ D E +VL EMAKKNL KRG+
Sbjct: 713 IGFAKFRSREEALGARDVLQGRRVDIEKGAVLKAEMAKKNLHTKRGV 759
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDA 106
+E+ TIF+ G P+D++ERE QN+ + PG+EA+ + ++ + + A AA +
Sbjct: 592 EEISTIFVVGFPEDMQEREFQNMFTFSPGFEAATLKIPNKEYTAYGGLVGSGTATAALRS 651
Query: 107 LQ 108
Q
Sbjct: 652 FQ 653
>gi|58270628|ref|XP_572470.1| cell wall integrity protein scw1 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134118120|ref|XP_772441.1| hypothetical protein CNBL3070 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255054|gb|EAL17794.1| hypothetical protein CNBL3070 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228728|gb|AAW45163.1| cell wall integrity protein scw1, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 955
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 47/93 (50%), Gaps = 18/93 (19%)
Query: 219 DNPPCNTLFIGNLGE--------SINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFED 270
NPP NTL++GNL EE LR LFS PGFK+M ++ +CF+EFE+
Sbjct: 597 QNPPINTLYVGNLPAVSPPTHPPGFLEESLRALFSRCPGFKRMSYRQKINGPMCFVEFEE 656
Query: 271 VNSASSV-----HHNLQGAVIPSSGSVGMRIQY 298
V AS HNL G V G+R+ Y
Sbjct: 657 VIYASQAIKELYGHNLGGLV-----KGGIRLSY 684
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY 83
+ TIF+ G PDD+ ERE QN+ + PG+EA+ + +
Sbjct: 194 ISTIFVVGFPDDMSEREFQNIFTFAPGFEAATLKF 228
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 28/48 (58%)
Query: 86 EKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
+ +GFA F T A+ AKD LQ D T SVL EMAKKNL K+
Sbjct: 319 RQTIGFARFKTRSDALTAKDHLQGKKIDPLTGSVLKAEMAKKNLHTKK 366
>gi|405124332|gb|AFR99094.1| cell wall integrity protein scw1 [Cryptococcus neoformans var.
grubii H99]
Length = 953
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 219 DNPPCNTLFIGNLGE--------SINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFED 270
NPP NTL++GNL EE LR LFS PGFK+M ++ +CF+EFE+
Sbjct: 597 QNPPINTLYVGNLPAVSPPTHPPGFLEESLRALFSRCPGFKRMSYRQKINGPMCFVEFEE 656
Query: 271 VNSASSVHHNLQGAVIPSSGSVGMRIQY 298
V AS L G + G+R+ Y
Sbjct: 657 VLYASQAIKELYGHNLGGLVKGGIRLSY 684
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 29/48 (60%)
Query: 86 EKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
+ +GFA F T A+AAKD LQ D T SVL EMAKKNL K+
Sbjct: 319 RQTIGFARFKTRSDALAAKDHLQGKKIDPLTGSVLKAEMAKKNLHTKK 366
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY---KGEKPMGFALFSTAQLAV 101
+ TIF+ G PDD+ ERE QN+ + PG+EA+ + + +P L QLA
Sbjct: 194 ISTIFVVGFPDDMSEREFQNIFTFAPGFEAATLKFPSGSRREPTAALLAELTQLAA 249
>gi|321264828|ref|XP_003197131.1| cell wall integrity protein scw1 [Cryptococcus gattii WM276]
gi|317463609|gb|ADV25344.1| cell wall integrity protein scw1, putative [Cryptococcus gattii
WM276]
Length = 963
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 47/92 (51%), Gaps = 18/92 (19%)
Query: 220 NPPCNTLFIGNLGE--------SINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDV 271
NPP NTL++GNL EE LR LFS PGFK+M ++ +CF+EFE+V
Sbjct: 600 NPPINTLYVGNLPAVSPPTHPPGFLEESLRALFSRCPGFKRMSYRQKINGPMCFVEFEEV 659
Query: 272 NSASSV-----HHNLQGAVIPSSGSVGMRIQY 298
AS HNL G V G+R+ Y
Sbjct: 660 LYASQAIKELYGHNLGGLV-----KGGIRLSY 686
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 29/48 (60%)
Query: 86 EKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
+ +GFA F T A+AAKD LQ D T SVL EMAKKNL K+
Sbjct: 319 RQTIGFARFKTRNDALAAKDHLQGKKIDPLTGSVLKAEMAKKNLHTKK 366
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNY 83
+ TIF+ G PDD+ ERE QN+ + PG+EA+ + +
Sbjct: 194 ISTIFVVGFPDDMSEREFQNIFTFAPGFEAATLKF 228
>gi|147902216|ref|NP_001085460.1| MGC80122 protein [Xenopus laevis]
gi|49257361|gb|AAH72799.1| MGC80122 protein [Xenopus laevis]
Length = 223
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 215 QNTK--DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVN 272
QNT+ DNPP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+
Sbjct: 138 QNTQVQDNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENET 196
Query: 273 SASSVHHNLQGAVIPSSGSVGMRIQY 298
A S LQG I S + M+I Y
Sbjct: 197 EAGSARDALQGFKITPSHA--MKITY 220
>gi|63592914|ref|XP_356179.3| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform 1 [Mus
musculus]
Length = 281
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 118/277 (42%), Gaps = 38/277 (13%)
Query: 51 TIFITGLPDDVKERELQN--------LLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVA 102
TI+I L + +K+ EL+ + L + + +G+ F +F +
Sbjct: 11 TIYINSLNEKIKKDELKKSPYAIFSQFGQILDILVSQSLKMRGQ---SFVIFKEVSSTIN 67
Query: 103 AKDALQEMIFD--------AETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKR--LRTG- 151
A ++Q F A+T S + +M K FV+R + ++ ++ G
Sbjct: 68 ALRSMQGFPFYGKPMHIQYAKTDSDIIAKM--KGTFVERDRKREKRKPKSQEKPAVKKGC 125
Query: 152 ---GDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDPYGGY----GVPPVQMPAPAP 204
G G P P PP P + P PPY G G+PP Q+P+ A
Sbjct: 126 SGWGSAPVVGAVQPVP-GMPPMPQAPRVMHHMPGQPPYMRPPGMILPPGLPPGQIPSRAM 184
Query: 205 VPA---PSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERH 261
P P Q +NPP + LF+ NL E NE L LF+ PGFK+++++ RH
Sbjct: 185 PPQQLIPGQMPHAQPLSENPPNHILFLTNLPEETNELMLSMLFTQFPGFKEVRLV-PGRH 243
Query: 262 TVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+ F+EF++ A + LQG I + + M+I +
Sbjct: 244 DIDFVEFDNEVQAGAARDVLQGFKITQNNA--MKISF 278
>gi|392568232|gb|EIW61406.1| hypothetical protein TRAVEDRAFT_34908 [Trametes versicolor
FP-101664 SS1]
Length = 1021
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 14/109 (12%)
Query: 202 PAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESIN---------EEELRGLFSAQPGFKQ 252
P+P SS + NPP NTL++GNL S + E+ LR LFS Q G+++
Sbjct: 759 PSPASGASSGTGRSGSDHNPPINTLYVGNLPTSTSPGGYTLSFLEDRLRDLFSKQLGYRK 818
Query: 253 MKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSV---GMRIQY 298
+ ++ +CFIEFE V A+ + L G + +G V G+R+ Y
Sbjct: 819 LCFRQKSNGPMCFIEFETVEYATKALNELYGDSL--NGLVRNGGIRLSY 865
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 25 AAAAAPPPPP---PVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV 81
+AP P P PVP N A +E+ TIF+ G PDD+ ERE QN+ + G+EA+ +
Sbjct: 262 GTTSAPNPNPTNGPVP----NSQAQEEISTIFVVGFPDDMSEREFQNMFTFSSGFEAATL 317
Query: 82 NYKGEKPMGFA 92
++ +A
Sbjct: 318 KIPNKESTSYA 328
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 28/46 (60%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRG 134
+GFA F T A+ A+D LQ D E +VL EMAKKNL KRG
Sbjct: 400 IGFAKFRTRADALQARDVLQGRRVDVEKGAVLKAEMAKKNLHTKRG 445
>gi|444317322|ref|XP_004179318.1| hypothetical protein TBLA_0B09815 [Tetrapisispora blattae CBS 6284]
gi|387512358|emb|CCH59799.1| hypothetical protein TBLA_0B09815 [Tetrapisispora blattae CBS 6284]
Length = 823
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 29/97 (29%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTV---------------- 263
NPPCNTL++GNL E ELR LFS QPGFK++ + +V
Sbjct: 631 NPPCNTLYVGNLPLDATEMELRQLFSNQPGFKRLSFRNKNSSSVSTPTSANPMSLSSNSN 690
Query: 264 -------------CFIEFEDVNSASSVHHNLQGAVIP 287
CF+EFED++ A+ L G+ +P
Sbjct: 691 NNNNNNNNNHGPMCFVEFEDISYATRALAELYGSQLP 727
>gi|41054443|ref|NP_955965.1| U1 small nuclear ribonucleoprotein A [Danio rerio]
gi|39850066|gb|AAH64308.1| Small nuclear ribonucleoprotein polypeptide A [Danio rerio]
Length = 281
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 13/106 (12%)
Query: 193 GVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQ 252
G+ P QMP P Q +NPP + LF+ NL E NE L LF+ PGFK+
Sbjct: 186 GMMPGQMPGQMP----------QQVSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKE 235
Query: 253 MKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
++++ RH + F+EF++ A + LQG I S + M+I +
Sbjct: 236 VRLV-PGRHDIAFVEFDNEVQAGAAREALQGFKITQSNA--MKISF 278
>gi|149263421|ref|XP_995150.2| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Mus musculus]
Length = 309
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 115/277 (41%), Gaps = 38/277 (13%)
Query: 51 TIFITGLPDDVKERELQNLL--------RWLPGYEASQVNYKGEKPMGFALFSTAQLAVA 102
TI+I L + +K+ EL+ L + L + + +G+ F +F +A
Sbjct: 14 TIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSQSLKMRGQV---FVIFKEVTIATN 70
Query: 103 AKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKR------------LRT 150
A ++ F + + +T+ N+ +G + + + ++ ++
Sbjct: 71 ALWSMLGFPFYDKPMRIQYTKTESDNIAKMKGTFVERDHKGEKRKPKSQETPAAKKAVQG 130
Query: 151 GGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDPYGGY----GVPPVQMPAPAPVP 206
G G P P PP P + P PPY P G G+ P Q+P P +P
Sbjct: 131 GAAAPVVGAVQPVP-GMPPMPQAPRIMHHVPGQPPYMPPAGMIPPTGLAPGQIP-PGAMP 188
Query: 207 APSSYVPVQN-----TKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERH 261
P +P Q +NPP + LF+ NL E NE L LF+ PGFK+ L H
Sbjct: 189 -PQQLMPGQMPPAPPLSENPPNHILFLTNLPEETNELMLSMLFTQFPGFKEAH-LVPGCH 246
Query: 262 TVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+ F+EF++ A + LQG I + + M+I +
Sbjct: 247 DIAFVEFDNEVQAGAALDALQGFKITQNNA--MKISF 281
>gi|343426262|emb|CBQ69793.1| related to WHI3-involved in regulation of cell size [Sporisorium
reilianum SRZ2]
Length = 1021
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 12/90 (13%)
Query: 219 DNPPCNTLFIGNL-------GESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDV 271
++PP NTLF+GNL S E+ LRG+F + GF+Q+ + +CF+EFEDV
Sbjct: 898 NHPPVNTLFVGNLPSNAASAALSQIEDHLRGVFGSCRGFRQISFRLKSNGPMCFVEFEDV 957
Query: 272 NSASSVHHNLQGAVIPSSGSV---GMRIQY 298
+AS L G + G++ G+R+ +
Sbjct: 958 YTASKAMSELNGHSL--GGAIKNGGIRLSF 985
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 27/45 (60%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
+GFA F T A+ A+DAL D E VL TEMAKKNL K+
Sbjct: 513 IGFAKFRTRAEALEARDALNGRKVDVEKGCVLKTEMAKKNLHTKQ 557
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV 81
+E+ T+FI G PDD+ ERE N+ + G+EAS +
Sbjct: 373 EEITTVFIVGFPDDMTEREFANMFLFAKGFEASTL 407
>gi|348538124|ref|XP_003456542.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Oreochromis
niloticus]
Length = 218
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 202 PAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERH 261
PA AP + P DNPP LF+ NL E NE L LF+ PGFK+++++ +H
Sbjct: 122 PAAGLAPPALTPAVQVPDNPPNYILFLSNLPEETNEMMLSMLFNQFPGFKEVRLV-PGKH 180
Query: 262 TVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+ F+EFE A LQG I + + M+I Y
Sbjct: 181 DIAFVEFESDTQAGVAKDALQGFRI--TATCAMKITY 215
>gi|256066562|ref|XP_002570569.1| hypothetical protein [Schistosoma mansoni]
gi|360043573|emb|CCD78986.1| hypothetical protein Smp_181270.2 [Schistosoma mansoni]
Length = 529
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 48 EVRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFALFSTAQLAVA 102
+VRT+F++GLP D K REL L R GY +S + N K P+GF F + + A
Sbjct: 89 QVRTLFVSGLPLDAKPRELYLLFRSFKGYLSSTLKPAGKNGKLTAPVGFVTFESREQAEE 148
Query: 103 AKDALQEMIFDAETKSVLHTEMAKKNLFVKR 133
A LQ + FD + + E A+ N V +
Sbjct: 149 AMSKLQGVKFDPDGNQHMRLEFARSNTKVTK 179
>gi|344299824|gb|EGW30177.1| hypothetical protein SPAPADRAFT_73559 [Spathaspora passalidarum
NRRL Y-27907]
Length = 710
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 14/82 (17%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT--------------VCF 265
NPPCNTL++GNL E ELR LFS Q GF+++ + + + +CF
Sbjct: 562 NPPCNTLYVGNLPPDATEAELRTLFSPQKGFRRLSFRTKTQSSTGGSSSSGSHSHGPMCF 621
Query: 266 IEFEDVNSASSVHHNLQGAVIP 287
+EFE + A+ +L G+ +P
Sbjct: 622 VEFESIAHATRALADLYGSALP 643
>gi|309266585|ref|XP_003086803.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Mus musculus]
Length = 282
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 161 APSPFHAPPA--PVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPA---PSSYVPVQ 215
AP H P P P G + PP G+PP Q+P+ A P P Q
Sbjct: 150 APRVMHHMPGQPPYMRPPGMILPP----------GLPPGQIPSRAMPPQQLIPGQMPHAQ 199
Query: 216 NTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSAS 275
+NPP + LF+ NL E NE L LF+ PGFK+++++ RH + F+EF++ A
Sbjct: 200 PLSENPPNHILFLTNLPEETNELMLSMLFTQFPGFKEVRLV-PGRHDIDFVEFDNEVQAG 258
Query: 276 SVHHNLQGAVIPSSGSVGMRIQY 298
+ LQG I + + M+I +
Sbjct: 259 AARDVLQGFKITQNNA--MKISF 279
>gi|448537570|ref|XP_003871360.1| Whi3 RNA binding protein [Candida orthopsilosis Co 90-125]
gi|380355717|emb|CCG25235.1| Whi3 RNA binding protein [Candida orthopsilosis]
Length = 770
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 28/107 (26%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT----------------- 262
NPPCNTL++GNL E ELR LF+ Q GF+++ + +
Sbjct: 587 NPPCNTLYVGNLPPDATEAELRTLFAPQKGFRRLSFRTKNQTNNSTGGSTSTTSTATNSS 646
Query: 263 ------VCFIEFEDVNSASSVHHNLQGAVIP-----SSGSVGMRIQY 298
+CF+EFEDV A+ L G +P ++G G+R+ +
Sbjct: 647 GHNHGPMCFVEFEDVAHATRALAELYGRTLPRPHAGNNGKGGIRLSF 693
>gi|148706068|gb|EDL38015.1| mCG22457 [Mus musculus]
Length = 275
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 208 PSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIE 267
P P Q +NPP + LF+ NL E NE L LF+ PGFK+++++ RH + F+E
Sbjct: 187 PGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV---RHDIAFVE 243
Query: 268 FEDVNSASSVHHNLQGAVIPSSGSVGMRI 296
F++ A + LQG I + ++ + +
Sbjct: 244 FDNEVQAGAARDALQGFKITQNNAMKISL 272
>gi|348534739|ref|XP_003454859.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Oreochromis
niloticus]
Length = 282
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 10/107 (9%)
Query: 193 GVPPVQM-PAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFK 251
+PP QM P P P Q +NPP + LF+ NL E NE L LF+ PGFK
Sbjct: 182 AIPPGQMMPGQMPGQMP------QQVAENPPNHILFLTNLPEETNELMLSMLFNQFPGFK 235
Query: 252 QMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+++++ RH + F+EFE+ A + LQG I + + M+I +
Sbjct: 236 EVRLV-PGRHDIAFVEFENEVQAGAARDALQGFKITQTNA--MKISF 279
>gi|336386980|gb|EGO28126.1| hypothetical protein SERLADRAFT_462668 [Serpula lacrymans var.
lacrymans S7.9]
Length = 511
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 12/89 (13%)
Query: 220 NPPCNTLFIGNLG-------ESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVN 272
NPP NTL++GNL EE LR LFS + G++++ ++ +CF+EFEDV+
Sbjct: 252 NPPINTLYVGNLPTVGGGYPSGYLEEALRDLFSRRSGYRKLCFRQKSNGPMCFVEFEDVS 311
Query: 273 SASSVHHNLQGAVIPSSGSV---GMRIQY 298
A+ + L G + SG V G+R+ Y
Sbjct: 312 FATKALNELYGNTL--SGLVKNGGIRLSY 338
>gi|194375486|dbj|BAG56688.1| unnamed protein product [Homo sapiens]
Length = 203
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 208 PSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIE 267
P P Q +NPP + LF+ NL E NE L LF+ PGFK+++++ RH + F+E
Sbjct: 113 PGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV-PGRHDIAFVE 171
Query: 268 FEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
F++ A + LQG I + + M+I +
Sbjct: 172 FDNEVQAGAARDALQGFKITQNNA--MKISF 200
>gi|395329839|gb|EJF62224.1| hypothetical protein DICSQDRAFT_104543 [Dichomitus squalens
LYAD-421 SS1]
Length = 1099
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 14/109 (12%)
Query: 202 PAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESIN---------EEELRGLFSAQPGFKQ 252
P+P SS + NPP NTL++GNL S + E+ LR LF Q G+++
Sbjct: 834 PSPASGTSSGGGRNGSDQNPPINTLYVGNLPTSTSPGGHTLSFLEDRLRELFLKQAGYRK 893
Query: 253 MKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSV---GMRIQY 298
+ ++ +CF+EFE V A+ ++L G + +G V G+R+ Y
Sbjct: 894 LCFRQKSNGPMCFVEFESVEFATKALNDLYGDTL--NGLVRNGGIRLSY 940
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 28/46 (60%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRG 134
+GFA F T A+ A+D LQ D E +VL EMAKKNL KRG
Sbjct: 473 IGFAKFRTRAEALEARDVLQGRRVDVEKGAVLKAEMAKKNLHTKRG 518
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 45 AHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV 81
A +E+ TIF+ G PDD+ ERE QN+ + G+EA+ +
Sbjct: 354 AQEEISTIFVVGFPDDMSEREFQNMFTFSVGFEAATL 390
>gi|295314954|gb|ADF97627.1| small nuclear ribonucleoprotein polypeptide A [Hypophthalmichthys
molitrix]
Length = 281
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 13/103 (12%)
Query: 196 PVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKV 255
P QMP P Q +NPP + LF+ NL E NE L LF+ PGFK++++
Sbjct: 189 PGQMPGQMP----------QQVSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRL 238
Query: 256 LRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+ RH + F+EF++ A + LQG I S + M+I +
Sbjct: 239 V-PGRHDIAFVEFDNEVQAGAAREALQGFKITQSNA--MKISF 278
>gi|7512025|pir||B46230 RNA-binding protein homolog Cpo (clone 61.2) - fruit fly
(Drosophila melanogaster)
Length = 536
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 39 DNTNRIAHDE-VRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFA 92
D+ N +++E VRT+F++GLP D K REL L R GYE S + N K P+GF
Sbjct: 440 DSVNTASNEEEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFV 499
Query: 93 LFSTAQLAVAAKDALQ 108
F T A AAK LQ
Sbjct: 500 TFHTRAGAEAAKQDLQ 515
>gi|1345458|emb|CAA78664.1| Cpo 61.2 [Drosophila melanogaster]
Length = 536
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 39 DNTNRIAHDE-VRTIFITGLPDDVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFA 92
D+ N +++E VRT+F++GLP D K REL L R GYE S + N K P+GF
Sbjct: 440 DSVNTASNEEEVRTLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFV 499
Query: 93 LFSTAQLAVAAKDALQ 108
F T A AAK LQ
Sbjct: 500 TFHTRAGAEAAKQDLQ 515
>gi|126723082|ref|NP_001075629.1| nuclear ribonucleoprotein A [Oryctolagus cuniculus]
gi|38641409|gb|AAR26269.1| nuclear ribonucleoprotein A [Oryctolagus cuniculus]
Length = 282
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Query: 208 PSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIE 267
P P Q +NPP + LF+ NL E NE L LF+ PGFK+++++ RH + F+E
Sbjct: 192 PGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV-PGRHDIAFVE 250
Query: 268 FEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
F++ A + +LQG I + + M+I +
Sbjct: 251 FDNEVQAGAARDSLQGFKITQNNA--MKISF 279
>gi|441653781|ref|XP_003270568.2| PREDICTED: U1 small nuclear ribonucleoprotein A [Nomascus
leucogenys]
Length = 211
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 208 PSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIE 267
P P Q +NPP + LF+ NL E NE L LF+ PGFK+++++ RH + F+E
Sbjct: 121 PGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV-PGRHDIAFVE 179
Query: 268 FEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
F++ A + LQG I + + M+I +
Sbjct: 180 FDNEVQAGAARDALQGFKITQNNA--MKISF 208
>gi|440800677|gb|ELR21712.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 341
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 111/272 (40%), Gaps = 28/272 (10%)
Query: 52 IFITGLPDDVKERELQNLLRWLPGYEASQVNY-KGEKPMGFALFSTAQLAVAAKDALQEM 110
+FI +P +V E E ++ PGY ++++ + E +GF FS + A A++
Sbjct: 48 LFIAEIPLEVTEAEFRSTFSSEPGYISARLRRDRNENTVGFVEFSDHKSAAEAREQFNNF 107
Query: 111 IFDAE-----TKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTG---GDYTHTGYSA- 161
F T H K+ G + YDQ R G G Y H GY +
Sbjct: 108 KFSHNDDHGITIHFAHEHSRNKHRERDDGKHYGSQHYDQPSSSRKGYNNGGYRHDGYGSM 167
Query: 162 -PSPFHAPPAPVWG----PHGY--MAPPPPPYDPYGGYGVPPVQMPAP-APVPAPSSYVP 213
+ ++ + G P G M P P D G V A A P +Y P
Sbjct: 168 RAADVNSRVSLTSGLPLVPMGVSPMMPGPTSLDMSGMQFYSTVAPNAQFASYVQPQAYSP 227
Query: 214 VQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERH-------TVCFI 266
Q + D P TL++ L E E+ +F PG+ +++ +E +C++
Sbjct: 228 -QLSPDAAP--TLYVEGLPLDATEREVAHIFRQMPGYLGIRIKPKESKQHPSRVFNLCWV 284
Query: 267 EFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
EFE +A+ H+L+G + + + G+ I Y
Sbjct: 285 EFETKYNAAVALHHLKGYKMDKNDTKGLTISY 316
>gi|241686636|ref|XP_002412834.1| hypothetical protein IscW_ISCW022577 [Ixodes scapularis]
gi|215506636|gb|EEC16130.1| hypothetical protein IscW_ISCW022577 [Ixodes scapularis]
Length = 144
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEAS-----QVNYKGEKPMGFALFSTAQLAVAA 103
VRT+F++GLP D K REL L R GYE S Q N K P+GF FS+ A AA
Sbjct: 75 VRTLFVSGLPMDAKPRELYLLFRAYKGYEGSLLKVTQKNGKTSSPVGFVTFSSRAGAEAA 134
Query: 104 KDALQE 109
K LQE
Sbjct: 135 KQELQE 140
>gi|395859649|ref|XP_003802146.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 2 [Otolemur
garnettii]
Length = 231
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Query: 191 GYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGF 250
G PV PVPAP + +NPP + LF+ NL E NE L LF+ PGF
Sbjct: 127 GGAAAPVVGAVQGPVPAP---ILSWQLSENPPNHILFLTNLPEETNELMLSMLFNQFPGF 183
Query: 251 KQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
K+++++ RH + F+EF++ A + LQG I + + M+I +
Sbjct: 184 KEVRLV-PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNA--MKISF 228
>gi|58331942|ref|NP_001011120.1| small nuclear ribonucleoprotein polypeptide B [Xenopus (Silurana)
tropicalis]
gi|54038268|gb|AAH84519.1| hypothetical LOC496533 [Xenopus (Silurana) tropicalis]
gi|89268683|emb|CAJ82680.1| small nuclear ribonucleoprotein polypeptide B [Xenopus (Silurana)
tropicalis]
Length = 223
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 215 QNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSA 274
Q DNPP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A
Sbjct: 140 QQVPDNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENETEA 198
Query: 275 SSVHHNLQGAVIPSSGSVGMRIQY 298
+ LQG I S + M+I Y
Sbjct: 199 GAARDALQGFKITPSHA--MKITY 220
>gi|149640848|ref|XP_001514376.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 1
[Ornithorhynchus anatinus]
gi|345329106|ref|XP_003431335.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like
[Ornithorhynchus anatinus]
Length = 225
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
DNPP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 146 DNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|147902061|ref|NP_001088194.1| small nuclear ribonucleoprotein polypeptide B [Xenopus laevis]
gi|54035240|gb|AAH84107.1| LOC495019 protein [Xenopus laevis]
Length = 223
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
DNPP LF+ NL E NE L LF+ PGFK+++++ RH + F+EF++ A S
Sbjct: 144 DNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFDNETEAGSAR 202
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I +
Sbjct: 203 DALQGFKITPSNA--MKITF 220
>gi|313231469|emb|CBY08583.1| unnamed protein product [Oikopleura dioica]
Length = 337
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV--NYKGEKPMGFALFSTAQLAVAAK 104
D VRT++I GLP DVK RE++NL + +P +E + + ++ P+ FA FST + A +AK
Sbjct: 116 DGVRTLYIAGLPCDVKHREIRNLFQHIPEFEGAVIKSSHGHIHPIAFATFSTVEAAKSAK 175
Query: 105 ---DALQEMIFDAETKSVLHTEMAKKN 128
Q I +AE K L + AK N
Sbjct: 176 LEYSGYQMDIDNAELK--LKIDFAKSN 200
>gi|241957399|ref|XP_002421419.1| RNA binding protein, putative; cell cycle modulator, dose-dependent
inhibitor of start, putative [Candida dubliniensis CD36]
gi|223644763|emb|CAX40754.1| RNA binding protein, putative [Candida dubliniensis CD36]
Length = 689
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 49/111 (44%), Gaps = 32/111 (28%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER------------------- 260
NPPCNTL++GNL E ELR LFS Q GF+++ + +
Sbjct: 527 NPPCNTLYVGNLPPDATESELRSLFSPQKGFRRLSFRTKNQPSSSNGSGGGSGSGSGGGG 586
Query: 261 ---------HTVCFIEFEDVNSASSVHHNLQGAVIP----SSGSVGMRIQY 298
+CF+EFEDV A+ L G +P +G G+R+ +
Sbjct: 587 GGGGGGHSHGPMCFVEFEDVAHATRALAELYGRALPRPNGGNGKGGIRLSF 637
>gi|12851426|dbj|BAB29037.1| unnamed protein product [Mus musculus]
Length = 287
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 194 VPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQM 253
+PP MP +P P Q +NPP + LF+ NL E NE L LF+ PGFK++
Sbjct: 185 IPPGAMPPQQLMPG--QMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEV 242
Query: 254 KVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+++ RH + F+EF++ A + LQG I + + M+I +
Sbjct: 243 RLV-PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNA--MKISF 284
>gi|387018112|gb|AFJ51174.1| u2 small nuclear ribonucleoprotein B-like [Crotalus adamanteus]
Length = 225
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
DNPP + LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 146 DNPPNHILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDISFVEFENEGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|444732044|gb|ELW72368.1| U1 small nuclear ribonucleoprotein A [Tupaia chinensis]
Length = 282
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 10/106 (9%)
Query: 193 GVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQ 252
+PP Q+ P P Q +NPP + LF+ NL E NE L LF+ PGFK+
Sbjct: 184 AIPPQQL-------MPGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKE 236
Query: 253 MKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
++++ RH + F+EF++ A + LQG I + + M+I +
Sbjct: 237 VRLV-PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNA--MKISF 279
>gi|114052106|ref|NP_056597.3| U1 small nuclear ribonucleoprotein A [Mus musculus]
gi|114052541|ref|NP_001040102.1| U1 small nuclear ribonucleoprotein A [Mus musculus]
gi|41017904|sp|Q62189.3|SNRPA_MOUSE RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|349004|gb|AAC37611.1| small nuclear RNA [Mus musculus]
gi|13096860|gb|AAH03229.1| Small nuclear ribonucleoprotein polypeptide A [Mus musculus]
gi|62740156|gb|AAH94006.1| Small nuclear ribonucleoprotein polypeptide A [Mus musculus]
gi|66794539|gb|AAH96648.1| Small nuclear ribonucleoprotein polypeptide A [Mus musculus]
gi|148692250|gb|EDL24197.1| mCG22754, isoform CRA_a [Mus musculus]
gi|148692251|gb|EDL24198.1| mCG22754, isoform CRA_a [Mus musculus]
Length = 287
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 208 PSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIE 267
P P Q +NPP + LF+ NL E NE L LF+ PGFK+++++ RH + F+E
Sbjct: 197 PGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV-PGRHDIAFVE 255
Query: 268 FEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
F++ A + LQG I + + M+I +
Sbjct: 256 FDNEVQAGAARDALQGFKITQNNA--MKISF 284
>gi|409079579|gb|EKM79940.1| hypothetical protein AGABI1DRAFT_127618 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1064
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 220 NPPCNTLFIGNLGES---------INEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFED 270
NPP NTL++GNL S EE LR LF QPG++++ ++ +CF+EFED
Sbjct: 826 NPPINTLYVGNLPTSPPPIGMPQDHLEESLRELFRNQPGYRRLCFRQKHNGPMCFVEFED 885
Query: 271 VNSASSVHHNLQGAVIPSSGSV---GMRIQY 298
V A+ +L G + G V G+R+ Y
Sbjct: 886 VGFAARAMSDLHGNNL--KGLVKGGGIRLSY 914
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGI 135
+GFA F + A+ A+D LQ D E ++L EMAKKNL KRG+
Sbjct: 443 IGFAKFKSRDAAIEARDVLQGRRIDIEKGAILKAEMAKKNLHTKRGV 489
>gi|225716164|gb|ACO13928.1| RNA-binding protein with multiple splicing [Esox lucius]
Length = 100
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 40 NTNRIA-HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQ 98
N N ++ +EVRT+F++GLP D+K REL L R GYE S + ++P+GF F
Sbjct: 10 NNNVVSLEEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDNRT 69
Query: 99 LAVAAKDAL 107
A AAK+AL
Sbjct: 70 GAEAAKNAL 78
>gi|351715411|gb|EHB18330.1| U1 small nuclear ribonucleoprotein A [Heterocephalus glaber]
Length = 282
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
Query: 194 VPPVQMPAPAPVP----APSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPG 249
+ P QMP P +P P P Q +NPP + LF+ NL E NE L LF+ PG
Sbjct: 175 LAPGQMP-PGAMPPQQLMPGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPG 233
Query: 250 FKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
FK+++++ RH + F+EF++ A + LQG I + + M+I +
Sbjct: 234 FKEVRLV-PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNA--MKISF 279
>gi|426192468|gb|EKV42404.1| hypothetical protein AGABI2DRAFT_188573 [Agaricus bisporus var.
bisporus H97]
Length = 911
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 14/91 (15%)
Query: 220 NPPCNTLFIGNLGES---------INEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFED 270
NPP NTL++GNL S EE LR LF QPG++++ ++ +CF+EFED
Sbjct: 673 NPPINTLYVGNLPTSPPPIGMPQDHLEESLRELFRNQPGYRRLCFRQKHNGPMCFVEFED 732
Query: 271 VNSASSVHHNLQGAVIPSSGSV---GMRIQY 298
V A+ +L G + G V G+R+ Y
Sbjct: 733 VGFAARAMSDLHGNNL--KGLVKGGGIRLSY 761
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGI 135
+GFA F + A+ A+D LQ D E ++L EMAKKNL KRG+
Sbjct: 326 IGFAKFKSRDAAIEARDVLQGRRIDIEKGAILKAEMAKKNLHTKRGV 372
>gi|387018110|gb|AFJ51173.1| U1 small nuclear ribonucleoprotein A [Crotalus adamanteus]
Length = 281
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 193 GVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQ 252
+PP QM P Q +NPP + LF+ NL E NE L LF+ PGFK+
Sbjct: 183 AMPPQQM-------LPGQMATAQQLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKE 235
Query: 253 MKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
++++ RH + F+EF++ A + LQG I + + M+I +
Sbjct: 236 VRLV-PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNA--MKISF 278
>gi|126329351|ref|XP_001371614.1| PREDICTED: u1 small nuclear ribonucleoprotein A-like [Monodelphis
domestica]
Length = 340
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 10/106 (9%)
Query: 193 GVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQ 252
+PP QM P +P P Q +NPP + LF+ NL E NE L LF+ PGFK+
Sbjct: 242 AMPPQQM-MPGQMP------PAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKE 294
Query: 253 MKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
++++ RH + F+EF++ A + LQG I + + M+I +
Sbjct: 295 VRLV-PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNA--MKISF 337
>gi|354486243|ref|XP_003505291.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
A-like [Cricetulus griseus]
Length = 284
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 194 VPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQM 253
+PP MP +P P Q +NPP + LF+ NL E NE L LF+ PGFK++
Sbjct: 182 IPPGAMPPQQLMPG--QMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEV 239
Query: 254 KVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+++ RH + F+EF++ A + LQG I + + M+I +
Sbjct: 240 RLV-PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNA--MKISF 281
>gi|73948310|ref|XP_533663.2| PREDICTED: U1 small nuclear ribonucleoprotein A [Canis lupus
familiaris]
gi|149722301|ref|XP_001499386.1| PREDICTED: u1 small nuclear ribonucleoprotein A-like [Equus
caballus]
gi|301776649|ref|XP_002923740.1| PREDICTED: u1 small nuclear ribonucleoprotein A-like [Ailuropoda
melanoleuca]
gi|403305332|ref|XP_003943221.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Saimiri
boliviensis boliviensis]
gi|281340732|gb|EFB16316.1| hypothetical protein PANDA_012942 [Ailuropoda melanoleuca]
Length = 282
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 194 VPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQM 253
+PP MP +P P Q +NPP + LF+ NL E NE L LF+ PGFK++
Sbjct: 180 IPPGAMPPQQLMPG--QMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEV 237
Query: 254 KVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+++ RH + F+EF++ A + LQG I + + M+I +
Sbjct: 238 RLV-PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNA--MKISF 279
>gi|149597291|ref|XP_001509496.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like
[Ornithorhynchus anatinus]
Length = 139
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 213 PVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVN 272
P Q +NPP + LF+ NL E NE L LF+ PGFK+++++ RH + F+EF++
Sbjct: 54 PAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFDNEV 112
Query: 273 SASSVHHNLQGAVIPSSGSVGMRIQY 298
A + LQG I + + M+I +
Sbjct: 113 QAGAARDALQGFKITQNNA--MKISF 136
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 10/111 (9%)
Query: 17 PAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGY 76
P PP A PP P+ + N I +F+T LP++ E L L PG+
Sbjct: 39 PGAMPPQQMMAGQMPPAQPLSENPPNHI-------LFLTNLPEETNELMLSMLFNQFPGF 91
Query: 77 EASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKK 127
+ ++ G + F F A AA+DALQ F + + AKK
Sbjct: 92 KEVRL-VPGRHDIAFVEFDNEVQAGAARDALQG--FKITQNNAMKISFAKK 139
>gi|383873129|ref|NP_001244434.1| U1 small nuclear ribonucleoprotein A [Macaca mulatta]
gi|114677331|ref|XP_512674.2| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 2 [Pan
troglodytes]
gi|297704832|ref|XP_002829283.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Pongo abelii]
gi|397482634|ref|XP_003812525.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Pan paniscus]
gi|402905610|ref|XP_003915609.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Papio anubis]
gi|355703564|gb|EHH30055.1| hypothetical protein EGK_10636 [Macaca mulatta]
gi|355755853|gb|EHH59600.1| hypothetical protein EGM_09749 [Macaca fascicularis]
gi|380784673|gb|AFE64212.1| U1 small nuclear ribonucleoprotein A [Macaca mulatta]
gi|383414025|gb|AFH30226.1| U1 small nuclear ribonucleoprotein A [Macaca mulatta]
gi|384943590|gb|AFI35400.1| U1 small nuclear ribonucleoprotein A [Macaca mulatta]
gi|410207170|gb|JAA00804.1| small nuclear ribonucleoprotein polypeptide A [Pan troglodytes]
gi|410287236|gb|JAA22218.1| small nuclear ribonucleoprotein polypeptide A [Pan troglodytes]
Length = 282
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 194 VPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQM 253
+PP MP +P P Q +NPP + LF+ NL E NE L LF+ PGFK++
Sbjct: 180 IPPGAMPPQQLMPG--QMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEV 237
Query: 254 KVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+++ RH + F+EF++ A + LQG I + + M+I +
Sbjct: 238 RLV-PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNA--MKISF 279
>gi|410983004|ref|XP_003997834.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Felis catus]
Length = 282
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 194 VPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQM 253
+PP MP +P P Q +NPP + LF+ NL E NE L LF+ PGFK++
Sbjct: 180 IPPGAMPPQQLMPG--QMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEV 237
Query: 254 KVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+++ RH + F+EF++ A + LQG I + + M+I +
Sbjct: 238 RLV-PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNA--MKISF 279
>gi|344250312|gb|EGW06416.1| U1 small nuclear ribonucleoprotein A [Cricetulus griseus]
Length = 291
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 194 VPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQM 253
+PP MP +P P Q +NPP + LF+ NL E NE L LF+ PGFK++
Sbjct: 189 IPPGAMPPQQLMPG--QMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEV 246
Query: 254 KVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+++ RH + F+EF++ A + LQG I + + M+I +
Sbjct: 247 RLV-PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNA--MKISF 288
>gi|410909846|ref|XP_003968401.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform 1
[Takifugu rubripes]
Length = 273
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 215 QNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSA 274
Q +NPP + LF+ NL E NE L LF+ PGFK+++++ RH + F+EF++ A
Sbjct: 190 QQVSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFDNEVQA 248
Query: 275 SSVHHNLQGAVIPSSGSVGMRIQY 298
+ LQG I S + M+I +
Sbjct: 249 GAARDALQGFKITQSNA--MKISF 270
>gi|56605690|ref|NP_001008304.1| U1 small nuclear ribonucleoprotein A [Rattus norvegicus]
gi|55562825|gb|AAH86331.1| Small nuclear ribonucleoprotein polypeptide A [Rattus norvegicus]
gi|149056537|gb|EDM07968.1| small nuclear ribonucleoprotein polypeptide A [Rattus norvegicus]
Length = 281
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 194 VPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQM 253
+PP MP +P P Q +NPP + LF+ NL E NE L LF+ PGFK++
Sbjct: 179 IPPGAMPPQQLMPG--QMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEV 236
Query: 254 KVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+++ RH + F+EF++ A + LQG I + + M+I +
Sbjct: 237 RLV-PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNA--MKISF 278
>gi|189053747|dbj|BAG35999.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 194 VPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQM 253
+PP MP +P P Q +NPP + LF+ NL E NE L LF+ PGFK++
Sbjct: 180 IPPGAMPPQQLMPG--QMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEV 237
Query: 254 KVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+++ RH + F+EF++ A + LQG I + + M+I +
Sbjct: 238 RLV-PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNA--MKISF 279
>gi|4759156|ref|NP_004587.1| U1 small nuclear ribonucleoprotein A [Homo sapiens]
gi|134092|sp|P09012.3|SNRPA_HUMAN RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|315583598|pdb|3PGW|A Chain A, Crystal Structure Of Human U1 Snrnp
gi|315583607|pdb|3PGW|P Chain P, Crystal Structure Of Human U1 Snrnp
gi|37541|emb|CAA29653.1| unnamed protein product [Homo sapiens]
gi|340052|gb|AAA61245.1| U1 snRNP-specific protein A [Homo sapiens]
gi|12653273|gb|AAH00405.1| Small nuclear ribonucleoprotein polypeptide A [Homo sapiens]
gi|14249835|gb|AAH08290.1| Small nuclear ribonucleoprotein polypeptide A [Homo sapiens]
gi|119577399|gb|EAW56995.1| small nuclear ribonucleoprotein polypeptide A, isoform CRA_a [Homo
sapiens]
gi|208967436|dbj|BAG73732.1| small nuclear ribonucleoprotein polypeptide A [synthetic construct]
Length = 282
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 194 VPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQM 253
+PP MP +P P Q +NPP + LF+ NL E NE L LF+ PGFK++
Sbjct: 180 IPPGAMPPQQLMPG--QMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEV 237
Query: 254 KVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+++ RH + F+EF++ A + LQG I + + M+I +
Sbjct: 238 RLV-PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNA--MKISF 279
>gi|426388777|ref|XP_004060809.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 1 [Gorilla
gorilla gorilla]
Length = 282
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 194 VPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQM 253
+PP MP +P P Q +NPP + LF+ NL E NE L LF+ PGFK++
Sbjct: 180 IPPGAMPPQQLMPG--QMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEV 237
Query: 254 KVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+++ RH + F+EF++ A + LQG I + + M+I +
Sbjct: 238 RLV-PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNA--MKISF 279
>gi|395859647|ref|XP_003802145.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 1 [Otolemur
garnettii]
Length = 282
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 194 VPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQM 253
+PP MP +P P Q +NPP + LF+ NL E NE L LF+ PGFK++
Sbjct: 180 IPPGAMPPQQLMPG--QMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEV 237
Query: 254 KVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+++ RH + F+EF++ A + LQG I + + M+I +
Sbjct: 238 RLV-PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNA--MKISF 279
>gi|348552486|ref|XP_003462058.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cavia
porcellus]
Length = 282
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 194 VPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQM 253
+PP MP +P P Q +NPP + LF+ NL E NE L LF+ PGFK++
Sbjct: 180 IPPGAMPPQQLMPG--QMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEV 237
Query: 254 KVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+++ RH + F+EF++ A + LQG I + + M+I +
Sbjct: 238 RLV-PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNA--MKISF 279
>gi|440910289|gb|ELR60098.1| U1 small nuclear ribonucleoprotein A, partial [Bos grunniens mutus]
Length = 287
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 208 PSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIE 267
P P Q +NPP + LF+ NL E NE L LF+ PGFK+++++ RH + F+E
Sbjct: 197 PGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV-PGRHDIAFVE 255
Query: 268 FEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
F++ A + LQG I + + M+I +
Sbjct: 256 FDNEVQAGAARDALQGFKITQNNA--MKISF 284
>gi|116175267|ref|NP_001070690.1| U1 small nuclear ribonucleoprotein A [Sus scrofa]
gi|122131847|sp|Q06AA4.1|SNRPA_PIG RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|115371743|gb|ABI96196.1| SNRPA [Sus scrofa]
Length = 282
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 194 VPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQM 253
+PP MP +P P Q +NPP + LF+ NL E NE L LF+ PGFK++
Sbjct: 180 IPPGAMPPQQLMPG--QMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEV 237
Query: 254 KVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+++ RH + F+EF++ A + LQG I + + M+I +
Sbjct: 238 RLV-PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNA--MKISF 279
>gi|114051315|ref|NP_001039504.1| U1 small nuclear ribonucleoprotein A [Bos taurus]
gi|187607541|ref|NP_001119825.1| U1 small nuclear ribonucleoprotein A [Ovis aries]
gi|122142801|sp|Q2KIR1.1|SNRPA_BOVIN RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|86437996|gb|AAI12545.1| Small nuclear ribonucleoprotein polypeptide A [Bos taurus]
gi|184191137|gb|ACC76781.1| SNPRA [Ovis aries]
gi|296477802|tpg|DAA19917.1| TPA: U1 small nuclear ribonucleoprotein A [Bos taurus]
Length = 282
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 208 PSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIE 267
P P Q +NPP + LF+ NL E NE L LF+ PGFK+++++ RH + F+E
Sbjct: 192 PGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV-PGRHDIAFVE 250
Query: 268 FEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
F++ A + LQG I + + M+I +
Sbjct: 251 FDNEVQAGAARDALQGFKITQNNA--MKISF 279
>gi|355721034|gb|AES07131.1| small nuclear ribonucleoprotein polypeptide A [Mustela putorius
furo]
Length = 281
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 208 PSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIE 267
P P Q +NPP + LF+ NL E NE L LF+ PGFK+++++ RH + F+E
Sbjct: 192 PGQMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV-PGRHDIAFVE 250
Query: 268 FEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
F++ A + LQG I + + M+I +
Sbjct: 251 FDNEVQAGAARDALQGFKITQNNA--MKISF 279
>gi|149234798|ref|XP_001523278.1| hypothetical protein LELG_05504 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146453067|gb|EDK47323.1| hypothetical protein LELG_05504 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 817
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 28/106 (26%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT----------------- 262
NPPCNTL++GNL E ELR LF+ Q GF+++ R + T
Sbjct: 636 NPPCNTLYVGNLPPDATETELRTLFAPQKGFRRLS-FRTKNATPSSSTGTNGNGGASTTS 694
Query: 263 ------VCFIEFEDVNSASSVHHNLQGAVIPS----SGSVGMRIQY 298
+CF+EFEDV A+ L GA +P + G+R+ +
Sbjct: 695 SHNHGPMCFVEFEDVAHATRALAELYGAALPRPQGLNAKGGIRLSF 740
>gi|47225009|emb|CAF97424.1| unnamed protein product [Tetraodon nigroviridis]
Length = 272
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 215 QNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSA 274
Q +NPP + LF+ NL E NE L LF+ PGFK+++++ RH + F+EF++ A
Sbjct: 189 QQVSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFDNEVQA 247
Query: 275 SSVHHNLQGAVIPSSGSVGMRIQY 298
++ LQG I + + M+I +
Sbjct: 248 AAAREALQGFKITQTNA--MKISF 269
>gi|354544405|emb|CCE41128.1| hypothetical protein CPAR2_301170 [Candida parapsilosis]
Length = 776
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 32/111 (28%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT----------------- 262
NPPCNTL++GNL E ELR LF Q GF+++ +
Sbjct: 587 NPPCNTLYVGNLPPDATEAELRALFQPQKGFRRLSFRTKNSTNNNTGSSTSTSTSTGSGS 646
Query: 263 ----------VCFIEFEDVNSASSVHHNLQGAVIP-----SSGSVGMRIQY 298
+CF+EFEDV A+ L G +P +SG G+R+ +
Sbjct: 647 SNSSGHNHGPMCFVEFEDVAHATRALAELYGRTLPRPHVGNSGKGGIRLSF 697
>gi|417409102|gb|JAA51075.1| Putative spliceosomal protein snrnp-u1a/u2b, partial [Desmodus
rotundus]
Length = 258
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 194 VPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQM 253
+PP MP +P P Q +NPP + LF+ NL E NE L LF+ PGFK++
Sbjct: 156 IPPGAMPPQQLMPG--QMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEV 213
Query: 254 KVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+++ RH + F+EF++ A + LQG I + + M+I +
Sbjct: 214 RLV-PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNA--MKISF 255
>gi|149057907|gb|EDM09150.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_a [Rattus norvegicus]
gi|149057912|gb|EDM09155.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_a [Rattus norvegicus]
gi|149057917|gb|EDM09160.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_a [Rattus norvegicus]
Length = 90
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDAL 107
VRT+F++GLP D+K REL L R GYE S + ++P+GF F + A AAK+AL
Sbjct: 6 VRTLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVSFDSRSEAEAAKNAL 64
>gi|327260920|ref|XP_003215280.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like [Anolis
carolinensis]
Length = 224
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
DNPP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 145 DNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENEGQAGAAR 203
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 204 DALQGFKITPSHA--MKITY 221
>gi|432109445|gb|ELK33675.1| U1 small nuclear ribonucleoprotein A [Myotis davidii]
Length = 282
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 194 VPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQM 253
+PP MP +P P Q +NPP + LF+ NL E NE L LF+ PGFK++
Sbjct: 180 IPPGAMPPQQLMPG--QMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEV 237
Query: 254 KVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+++ RH + F+EF++ A + LQG I + + M+I +
Sbjct: 238 RLV-PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNA--MKISF 279
>gi|387914214|gb|AFK10716.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
gi|392878676|gb|AFM88170.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
gi|392884228|gb|AFM90946.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
gi|392884422|gb|AFM91043.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
gi|392884424|gb|AFM91044.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
Length = 226
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
DNPP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 147 DNPPNYILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENEGQAGAAR 205
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 206 DALQGFRITPSHA--MKITY 223
>gi|387915158|gb|AFK11188.1| RNA binding protein with multiple splicing 2 [Callorhinchus milii]
Length = 180
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%)
Query: 60 DVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSV 119
D+K REL L R GYE S + ++P+GF F + A AAK+AL + FD E
Sbjct: 2 DIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDSRTGAEAAKNALNGIRFDPENPQT 61
Query: 120 LHTEMAKKNLFVKRGIVADT 139
L E AK N + + + T
Sbjct: 62 LRLEFAKANTKMAKSKLMGT 81
>gi|363731244|ref|XP_003640940.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1 [Gallus
gallus]
Length = 207
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 197 VQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVL 256
+Q AP + Q DNPP LF+ NL E NE L LF+ PGFK+++++
Sbjct: 106 IQGATQNSTSAPGTSPQNQQVPDNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV 165
Query: 257 RQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
RH + F+EFE+ A + LQG I S + M+I Y
Sbjct: 166 -PGRHDIAFVEFENECQAGAARDALQGFKITPSHA--MKITY 204
>gi|431920192|gb|ELK18231.1| U1 small nuclear ribonucleoprotein A [Pteropus alecto]
Length = 282
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 194 VPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQM 253
+PP MP +P P Q +NPP + LF+ NL E NE L LF+ PGFK++
Sbjct: 180 IPPGAMPPQQLMPG--QMPPAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEV 237
Query: 254 KVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+++ RH + F+EF++ A + LQG I + + M+I +
Sbjct: 238 RLV-PGRHDIAFVEFDNEVQAGAARDALQGFKITQNNA--MKISF 279
>gi|392883960|gb|AFM90812.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
Length = 226
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
DNPP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 147 DNPPNYILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENEGQAGAAR 205
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 206 DALQGFRITPSHA--MKITY 223
>gi|432890232|ref|XP_004075429.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform 1
[Oryzias latipes]
gi|432890234|ref|XP_004075430.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform 2
[Oryzias latipes]
Length = 272
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 215 QNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSA 274
Q +NPP + LF+ NL E NE L LF+ PGFK+++++ RH + F+EF++ A
Sbjct: 189 QQVAENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFDNEVQA 247
Query: 275 SSVHHNLQGAVIPSSGSVGMRIQY 298
+ +LQG I + + M+I +
Sbjct: 248 GAARDSLQGFKITQTHA--MKISF 269
>gi|50738734|ref|XP_419331.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Gallus
gallus]
gi|326914835|ref|XP_003203728.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like [Meleagris
gallopavo]
Length = 226
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 197 VQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVL 256
+Q AP + Q DNPP LF+ NL E NE L LF+ PGFK+++++
Sbjct: 125 IQGATQNSTSAPGTSPQNQQVPDNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV 184
Query: 257 RQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
RH + F+EFE+ A + LQG I S + M+I Y
Sbjct: 185 -PGRHDIAFVEFENECQAGAARDALQGFKITPSHA--MKITY 223
>gi|410909848|ref|XP_003968402.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform 2
[Takifugu rubripes]
Length = 279
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 198 QMPAPAPVPA--PSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKV 255
QMP A +P P + +NPP + LF+ NL E NE L LF+ PGFK++++
Sbjct: 177 QMPPGAMMPGQMPQQVCCLLVVSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRL 236
Query: 256 LRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+ RH + F+EF++ A + LQG I S + M+I +
Sbjct: 237 V-PGRHDIAFVEFDNEVQAGAARDALQGFKITQSNA--MKISF 276
>gi|355784710|gb|EHH65561.1| U2 small nuclear ribonucleoprotein B'' [Macaca fascicularis]
Length = 225
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I +S + M+I Y
Sbjct: 205 DALQGFKITTSHA--MKITY 222
>gi|432953888|ref|XP_004085464.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 2
[Oryzias latipes]
Length = 218
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
DNPP + LF+ NL E NE L LF+ PGFK+++++ +H + F+EFE A
Sbjct: 139 DNPPNHILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGKHDIAFVEFESDTQAGVAK 197
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I + + M+I +
Sbjct: 198 DALQGFRI--TATCAMKITF 215
>gi|148696477|gb|EDL28424.1| mCG19497, isoform CRA_a [Mus musculus]
Length = 132
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 53 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 111
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 112 DALQGFKITPSHA--MKITY 129
>gi|291234607|ref|XP_002737237.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Saccoglossus
kowalevskii]
Length = 249
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 194 VPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQM 253
+P + +P+ P P Q+ ++ PP N LF+ NL E NE L+ LF+ FK++
Sbjct: 145 IPNMGLPSLMSQPPPMQQAAPQSVQEQPPNNILFLTNLPEETNEMMLQMLFNQFQAFKEV 204
Query: 254 KVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+++ RH + F+EFE+ A LQG I S + M+I +
Sbjct: 205 RLV-PGRHDIAFVEFENETQAGVAKDALQGFKITPSNA--MKISF 246
>gi|840823|emb|CAA44752.1| U2-snRNP-specific b'' [Mus musculus]
Length = 123
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 44 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 102
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 103 DALQGFKITPSHA--MKITY 120
>gi|313231398|emb|CBY08513.1| unnamed protein product [Oikopleura dioica]
Length = 239
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 79/190 (41%), Gaps = 29/190 (15%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV----------NYKGEKPMGFALFS 95
+E+RT+F++GLP DVKERE L + G+E + V N + P+ F F+
Sbjct: 40 REELRTLFVSGLPQDVKEREFYLLFQGFSGFECAIVKQPVRNVKLPNNQPLGPVAFLTFA 99
Query: 96 TAQLAVAAKDALQEMIFDAETKS-VLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDY 154
+ + A AKD D + + V+ E AK N K + ++ L G D
Sbjct: 100 SRKDAETAKDKFHGFALDPQVDNLVMKIEFAKAN--TKSRYRSRESSSLSPLSLSLGSDA 157
Query: 155 THTGYSAP---SPFHAPPAPVWGPHGYMAPP---------PPPYDPYGGY----GVPPVQ 198
H + P PF PP PH A P P Y + + G+ P+
Sbjct: 158 NHGVSAFPLFQDPFTMPPFAHCQPHNLGAHPLAIDAGAIWPFSYQDFSQFPMDAGLAPIL 217
Query: 199 MPAPAPVPAP 208
+P+ VP P
Sbjct: 218 LPSEHLVPIP 227
>gi|149041255|gb|EDL95188.1| rCG27500, isoform CRA_a [Rattus norvegicus]
Length = 132
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 53 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 111
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 112 DALQGFKITPSHA--MKITY 129
>gi|355721048|gb|AES07135.1| small nuclear ribonucleoprotein polypeptide B [Mustela putorius
furo]
Length = 99
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 20 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 78
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 79 DALQGFKITPSHA--MKITY 96
>gi|318065773|ref|NP_001187499.1| u2 small nuclear ribonucleoprotein b'' [Ictalurus punctatus]
gi|308322301|gb|ADO28288.1| u2 small nuclear ribonucleoprotein b'' [Ictalurus furcatus]
gi|308323171|gb|ADO28722.1| u2 small nuclear ribonucleoprotein b'' [Ictalurus punctatus]
Length = 219
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 96/251 (38%), Gaps = 45/251 (17%)
Query: 51 TIFITGLPDDVKERELQNLLRWLP---GYEASQVNYKGEKPMGFALFSTAQLAVAAKDAL 107
TI+I L D VK+ EL+ L L G V K K G A +LA AA +AL
Sbjct: 8 TIYINNLNDRVKKEELKRSLYALFSQFGQIVEIVAMKTMKMRGQAFVVFKELA-AATNAL 66
Query: 108 QEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHA 167
+++ + + AK T++ SK T GD
Sbjct: 67 RQLQGFPFYNKPMRIQYAK------------TDSDIVSKMRGTYGDKEKKKEKKKKAQEQ 114
Query: 168 PPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLF 227
P + PPP PA V P DNPP LF
Sbjct: 115 AANAAKKPVNAVNNQPPP----------------PATVQVP----------DNPPNYILF 148
Query: 228 IGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIP 287
+ NL E NE L LF+ PGFK+++++ +H + F+EFE A LQG I
Sbjct: 149 LTNLPEETNEMMLSMLFNQFPGFKEVRLV-PGKHDIAFVEFEGEAQAGVAKDALQGFRI- 206
Query: 288 SSGSVGMRIQY 298
+ + M+I Y
Sbjct: 207 -TATCAMKITY 216
>gi|371874989|ref|NP_001243119.1| U2 small nuclear ribonucleoprotein B'' [Danio rerio]
Length = 220
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
DNPP LF+ NL E NE L LF+ PGFK+++++ +H + F+EFE A
Sbjct: 141 DNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGKHDISFVEFESEAQAGVAK 199
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I + + M+I Y
Sbjct: 200 DALQGFRI--TATCAMKITY 217
>gi|358340304|dbj|GAA48227.1| U1 small nuclear ribonucleoprotein A [Clonorchis sinensis]
Length = 314
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 177 GYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESIN 236
G PPPP D GV P M PAP P + +P D PP LF+ NL E +
Sbjct: 203 GAAVPPPPNMDG----GVQPA-MTQPAPPPINPAMIP-----DQPPNKILFLTNLPEDSD 252
Query: 237 EEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQG 283
E L LF+ G+++++++ RH + F+EF + A + H LQG
Sbjct: 253 EAMLSMLFNQFSGYREVRMV-PGRHDIAFVEFGNEIEAGAAKHGLQG 298
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 222 PCNTLFIGNLGESINEEEL-RGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASS 276
P NTL+I NL E I +EL + L++ F Q+ + R F+ F+DVNSA++
Sbjct: 50 PNNTLYIRNLNEKIKRDELKKSLYAVFVQFGQILDIITSRTLKMRGQAFVVFDDVNSATT 109
Query: 277 VHHNLQ 282
+Q
Sbjct: 110 ALRAMQ 115
>gi|37748043|gb|AAH59527.1| Snrpb2 protein [Danio rerio]
Length = 229
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
DNPP LF+ NL E NE L LF+ PGFK+++++ +H + F+EFE A
Sbjct: 150 DNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGKHDISFVEFESEAQAGVAK 208
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I + + M+I Y
Sbjct: 209 DALQGFRI--TATCAMKITY 226
>gi|344255667|gb|EGW11771.1| U2 small nuclear ribonucleoprotein B'' [Cricetulus griseus]
Length = 180
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 101 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 159
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 160 DALQGFKITPSHA--MKITY 177
>gi|225707030|gb|ACO09361.1| U2 small nuclear ribonucleoprotein B [Osmerus mordax]
Length = 219
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 200 PAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQE 259
PA P++ V Q DNPP LF+ NL E NE L LF+ PGFK+++++
Sbjct: 122 PALGSNTQPNTQVTTQ-VPDNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PG 179
Query: 260 RHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+H + F+EFE A LQG I + + M+I Y
Sbjct: 180 KHDISFVEFESEARAGVAKDALQGFRI--TATCAMKITY 216
>gi|297716585|ref|XP_002834591.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like, partial
[Pongo abelii]
Length = 99
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 20 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 78
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 79 DALQGFKITPSHA--MKITY 96
>gi|90086371|dbj|BAE91738.1| unnamed protein product [Macaca fascicularis]
Length = 147
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 68 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 126
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 127 DALQGFKITPSHA--MKITY 144
>gi|213510744|ref|NP_001134742.1| U1 small nuclear ribonucleoprotein A [Salmo salar]
gi|209735590|gb|ACI68664.1| U1 small nuclear ribonucleoprotein A [Salmo salar]
Length = 281
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+NPP + LF+ NL E NE L LF+ PGFK+++++ RH + F+EF++ A +
Sbjct: 202 ENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFDNDVQAGAAR 260
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I + + M+I +
Sbjct: 261 EALQGFKITQTNA--MKISF 278
>gi|432953883|ref|XP_004085463.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 1
[Oryzias latipes]
Length = 217
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
DNPP + LF+ NL E NE L LF+ PGFK+++++ +H + F+EFE A
Sbjct: 138 DNPPNHILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGKHDIAFVEFESDTQAGVAK 196
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I + + M+I +
Sbjct: 197 DALQGFRI--TATCAMKITF 214
>gi|148696478|gb|EDL28425.1| mCG19497, isoform CRA_b [Mus musculus]
Length = 203
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 124 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 182
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 183 DALQGFKITPSHA--MKITY 200
>gi|157836397|pdb|2U1A|A Chain A, Rna Binding Domain 2 Of Human U1a Protein, Nmr, 20
Structures
Length = 88
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 213 PVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVN 272
P Q +NPP + LF+ NL E NE L LF+ PGFK+++++ RH + F+EF++
Sbjct: 3 PAQPLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFDNEV 61
Query: 273 SASSVHHNLQGAVIPSSGSVGMRIQY 298
A + LQG I + + M+I +
Sbjct: 62 QAGAARDALQGFKITQNNA--MKISF 85
>gi|23956110|ref|NP_067310.1| U2 small nuclear ribonucleoprotein B'' [Mus musculus]
gi|52783420|sp|Q9CQI7.1|RU2B_MOUSE RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|12847289|dbj|BAB27510.1| unnamed protein product [Mus musculus]
gi|12851400|dbj|BAB29026.1| unnamed protein product [Mus musculus]
gi|20072417|gb|AAH26794.1| U2 small nuclear ribonucleoprotein B [Mus musculus]
gi|126035620|gb|ABN72533.1| U2 small nuclear ribonucleoprotein B [Mus spretus]
gi|148696479|gb|EDL28426.1| mCG19497, isoform CRA_c [Mus musculus]
Length = 225
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|353238521|emb|CCA70464.1| hypothetical protein PIIN_04402 [Piriformospora indica DSM 11827]
Length = 1077
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 17/92 (18%)
Query: 220 NPPCNTLFIGNL--------GESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDV 271
NPP NTL++GNL EE L LFS G+ ++ ++ +CF+EFEDV
Sbjct: 831 NPPINTLYVGNLPANPTNPQATKALEEALVQLFSRCQGYSKLSFRQKSNGPMCFVEFEDV 890
Query: 272 NSASSV-----HHNLQGAVIPSSGSVGMRIQY 298
SAS +NL G + S G+R+ Y
Sbjct: 891 ASASKALSDLYGNNLNGLIK----SGGIRLSY 918
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGI 135
+GFA F + + A+ A+D L D E ++L EMAKKNL KRG+
Sbjct: 405 IGFAKFRSREEALQARDVLHGRRVDIEKGALLKAEMAKKNLHTKRGV 451
>gi|149041256|gb|EDL95189.1| rCG27500, isoform CRA_b [Rattus norvegicus]
Length = 203
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 124 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 182
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 183 DALQGFKITPSHA--MKITY 200
>gi|349605397|gb|AEQ00652.1| U2 small nuclear ribonucleoprotein B''-like protein, partial [Equus
caballus]
Length = 197
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 118 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 176
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 177 DALQGFKITPSHA--MKITY 194
>gi|157819927|ref|NP_001102062.1| U2 small nuclear ribonucleoprotein B'' [Rattus norvegicus]
gi|354492046|ref|XP_003508163.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cricetulus
griseus]
gi|149041257|gb|EDL95190.1| rCG27500, isoform CRA_c [Rattus norvegicus]
gi|197245976|gb|AAI68760.1| Small nuclear ribonucleoprotein polypeptide B'' [Rattus norvegicus]
Length = 225
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|390479015|ref|XP_003735632.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
A-like [Callithrix jacchus]
Length = 275
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+NPP + LF+ NL E NE L LF+ PGFK+++++ RH + F+EF++ A +
Sbjct: 196 ENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFDNEVQAGAAR 254
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I + + M+I +
Sbjct: 255 DALQGFKITQNNA--MKISF 272
>gi|354542538|ref|NP_001238897.1| U2 small nuclear ribonucleoprotein B'' [Canis lupus familiaris]
Length = 225
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|313242687|emb|CBY39480.1| unnamed protein product [Oikopleura dioica]
Length = 196
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV--NYKGEKPMGFALFSTAQLAVAAK 104
D VRT++I GLP DVK RE++NL + +P +E + + ++ P+ FA FST + A +AK
Sbjct: 116 DGVRTLYIAGLPCDVKHREIRNLFQHIPEFEGAVIKSSHGHIHPIAFATFSTVEAAKSAK 175
>gi|301787297|ref|XP_002929064.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like [Ailuropoda
melanoleuca]
gi|410954385|ref|XP_003983845.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1 [Felis
catus]
gi|410954387|ref|XP_003983846.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Felis
catus]
gi|281346668|gb|EFB22252.1| hypothetical protein PANDA_019153 [Ailuropoda melanoleuca]
Length = 225
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|444729539|gb|ELW69952.1| U2 small nuclear ribonucleoprotein B'' [Tupaia chinensis]
Length = 225
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|291389004|ref|XP_002711008.1| PREDICTED: small nuclear ribonucleoprotein polypeptide B''
[Oryctolagus cuniculus]
Length = 225
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|344279401|ref|XP_003411476.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Loxodonta
africana]
Length = 225
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|119568196|gb|EAW47811.1| hCG22524, isoform CRA_b [Homo sapiens]
Length = 174
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 199 MPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQ 258
M P + P D PP LF+ NL E NE L LF+ PGFK++ L
Sbjct: 75 MGTPNSASTQGNSTPNPQVLDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEV-CLVP 133
Query: 259 ERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
RH + F+EFE+ A + LQG I +S + M+I Y
Sbjct: 134 GRHDIAFVEFENDGKAGAARDALQGFKITTSHA--MKITY 171
>gi|226443332|ref|NP_001139849.1| U2 small nuclear ribonucleoprotein B [Salmo salar]
gi|221219334|gb|ACM08328.1| U2 small nuclear ribonucleoprotein B [Salmo salar]
Length = 219
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
DNPP LF+ NL E NE L LF+ PGFK+++++ +H + F+EFE A
Sbjct: 140 DNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGKHDISFVEFESEGQAGVAK 198
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I + M+I Y
Sbjct: 199 DALQGFRI--TAQCAMKITY 216
>gi|395507829|ref|XP_003758221.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Sarcophilus
harrisii]
Length = 225
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|417397429|gb|JAA45748.1| Putative spliceosomal protein snrnp-u1a/u2b [Desmodus rotundus]
Length = 225
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|297706381|ref|XP_002830019.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Pongo
abelii]
Length = 225
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|403263452|ref|XP_003924046.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Saimiri
boliviensis boliviensis]
gi|197692169|dbj|BAG70048.1| small nuclear ribonucleoprotein polypeptide B'' [Homo sapiens]
gi|197692419|dbj|BAG70173.1| small nuclear ribonucleoprotein polypeptide B'' [Homo sapiens]
Length = 225
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|55732648|emb|CAH93023.1| hypothetical protein [Pongo abelii]
Length = 225
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|114681082|ref|XP_514523.2| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 5 [Pan
troglodytes]
gi|114681084|ref|XP_001137830.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 4 [Pan
troglodytes]
gi|296200238|ref|XP_002747509.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 2
[Callithrix jacchus]
gi|296200240|ref|XP_002747510.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 3
[Callithrix jacchus]
Length = 225
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|359718900|ref|NP_001240769.1| U2 small nuclear ribonucleoprotein B'' [Equus caballus]
gi|328908863|gb|AEB61099.1| u2 small nuclear ribonucleoprotein B''-like protein [Equus
caballus]
Length = 225
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|116175273|ref|NP_001070696.1| uncharacterized protein LOC768116 [Sus scrofa]
gi|426240670|ref|XP_004014217.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1 [Ovis
aries]
gi|115371759|gb|ABI96204.1| RU2B [Sus scrofa]
Length = 225
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|223649102|gb|ACN11309.1| U2 small nuclear ribonucleoprotein B [Salmo salar]
Length = 219
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
DNPP LF+ NL E NE L LF+ PGFK+++++ +H + F+EFE A
Sbjct: 140 DNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGKHDISFVEFESEGQAGVAK 198
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I + M+I Y
Sbjct: 199 DALQGFRI--TAQCAMKITY 216
>gi|4507123|ref|NP_003083.1| U2 small nuclear ribonucleoprotein B'' [Homo sapiens]
gi|38149981|ref|NP_937863.1| U2 small nuclear ribonucleoprotein B'' [Homo sapiens]
gi|332238115|ref|XP_003268248.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1
[Nomascus leucogenys]
gi|332238117|ref|XP_003268249.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2
[Nomascus leucogenys]
gi|397478615|ref|XP_003810638.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1 [Pan
paniscus]
gi|397478617|ref|XP_003810639.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Pan
paniscus]
gi|426391004|ref|XP_004061878.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1
[Gorilla gorilla gorilla]
gi|426391006|ref|XP_004061879.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2
[Gorilla gorilla gorilla]
gi|134095|sp|P08579.1|RU2B_HUMAN RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|340105|gb|AAA36796.1| U2 small nuclear ribonucleoprotein B'' [Homo sapiens]
gi|17390031|gb|AAH18022.1| Small nuclear ribonucleoprotein polypeptide B'' [Homo sapiens]
gi|22477822|gb|AAH36737.1| Small nuclear ribonucleoprotein polypeptide B'' [Homo sapiens]
gi|119630689|gb|EAX10284.1| small nuclear ribonucleoprotein polypeptide B'', isoform CRA_a
[Homo sapiens]
gi|119630690|gb|EAX10285.1| small nuclear ribonucleoprotein polypeptide B'', isoform CRA_a
[Homo sapiens]
gi|123979922|gb|ABM81790.1| small nuclear ribonucleoprotein polypeptide B'' [synthetic
construct]
gi|189066590|dbj|BAG35840.1| unnamed protein product [Homo sapiens]
gi|410226668|gb|JAA10553.1| small nuclear ribonucleoprotein polypeptide B [Pan troglodytes]
gi|410226670|gb|JAA10554.1| small nuclear ribonucleoprotein polypeptide B'' [Pan troglodytes]
gi|410263358|gb|JAA19645.1| small nuclear ribonucleoprotein polypeptide B'' [Pan troglodytes]
gi|410342435|gb|JAA40164.1| small nuclear ribonucleoprotein polypeptide B'' [Pan troglodytes]
Length = 225
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|403283665|ref|XP_003933231.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Saimiri
boliviensis boliviensis]
Length = 225
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|346473641|gb|AEO36665.1| hypothetical protein [Amblyomma maculatum]
Length = 183
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 15/97 (15%)
Query: 190 GGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPG 249
GG G+P V P + PP LF+ NL E NE L LF+ PG
Sbjct: 89 GGAGIPMVAATGALP--------------EQPPNQILFLTNLPEETNEMMLSMLFNQFPG 134
Query: 250 FKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVI 286
FK+++++ RH + F+EFE+ +S+ LQG I
Sbjct: 135 FKEVRLV-PGRHDIAFVEFENEIQSSAAKEALQGFKI 170
>gi|395858003|ref|XP_003801365.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Otolemur
garnettii]
Length = 225
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|300796380|ref|NP_001179481.1| U2 small nuclear ribonucleoprotein B'' [Bos taurus]
gi|426240672|ref|XP_004014218.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Ovis
aries]
gi|296481542|tpg|DAA23657.1| TPA: small nuclear ribonucleoprotein polypeptide B'' [Bos taurus]
Length = 218
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 139 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 197
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 198 DALQGFKITPSHA--MKITY 215
>gi|410917616|ref|XP_003972282.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
B''-like [Takifugu rubripes]
Length = 246
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
DNPP LF+ NL E NE L LF+ PGFK+++++ +H + F+EFE A
Sbjct: 167 DNPPNYILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV-PGKHDISFVEFESDVQAGVAK 225
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I + + M+I Y
Sbjct: 226 DALQGFRI--TATCAMKITY 243
>gi|409050459|gb|EKM59936.1| hypothetical protein PHACADRAFT_250746 [Phanerochaete carnosa
HHB-10118-sp]
Length = 568
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 29/46 (63%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRG 134
+GFA F T Q A+ A+D LQ D E SVL EMAKKNL KRG
Sbjct: 95 IGFAKFRTRQEALEARDVLQGRRVDLEKGSVLKAEMAKKNLHTKRG 140
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 212 VPVQNTKDNPPCNTLFIGNLGESIN--------EEELRGLFSAQPGFKQMKVLRQERHTV 263
+P+ +++ NTL++GNL + + EE LR LF Q G++Q+ + +
Sbjct: 493 IPLYSSQCTLKINTLYVGNLPATTSPGASSAKLEERLRELFQKQSGYRQLCFRHKSNGPM 552
Query: 264 CFIEFED 270
CF+E +
Sbjct: 553 CFVEVRN 559
>gi|348581624|ref|XP_003476577.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cavia
porcellus]
Length = 224
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 145 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 203
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 204 DALQGFKITPSHA--MKITY 221
>gi|386781069|ref|NP_001247823.1| U2 small nuclear ribonucleoprotein B'' [Macaca mulatta]
gi|402883260|ref|XP_003905142.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1 [Papio
anubis]
gi|402883262|ref|XP_003905143.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Papio
anubis]
gi|402883264|ref|XP_003905144.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 3 [Papio
anubis]
gi|355563375|gb|EHH19937.1| U2 small nuclear ribonucleoprotein B'' [Macaca mulatta]
gi|380787253|gb|AFE65502.1| U2 small nuclear ribonucleoprotein B'' [Macaca mulatta]
gi|383414075|gb|AFH30251.1| U2 small nuclear ribonucleoprotein B'' [Macaca mulatta]
gi|384942630|gb|AFI34920.1| U2 small nuclear ribonucleoprotein B'' [Macaca mulatta]
Length = 225
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|332855731|ref|XP_003316404.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 1 [Pan
troglodytes]
Length = 227
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+NPP + LF+ NL E NE L LF+ PGFK+++++ RH + F+EF++ A +
Sbjct: 148 ENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFDNEVQAGAAR 206
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I + + M+I +
Sbjct: 207 DALQGFKITQNNA--MKISF 224
>gi|440893400|gb|ELR46188.1| U2 small nuclear ribonucleoprotein B'', partial [Bos grunniens
mutus]
Length = 233
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 154 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 212
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 213 DALQGFKITPSHA--MKITY 230
>gi|358396521|gb|EHK45902.1| hypothetical protein TRIATDRAFT_318027 [Trichoderma atroviride IMI
206040]
Length = 868
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 218 KDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSV 277
+ N NTL++ N + +EE L+ +FS Q G+++M + +CF+EF D SA
Sbjct: 481 EQNTGSNTLYVYNFSKEASEEGLKAIFSKQQGYEKMLFKTTQAGPICFVEFHDTTSAIKA 540
Query: 278 HHNLQGAVIPSSGSV--GMRIQY 298
N+ G +P ++ G+R+ +
Sbjct: 541 LLNIHGQTLPLYETLKGGIRMSF 563
>gi|195055448|ref|XP_001994631.1| GH15023 [Drosophila grimshawi]
gi|193892394|gb|EDV91260.1| GH15023 [Drosophila grimshawi]
Length = 396
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER------------HTVCFIE 267
N PC+TLF+ NLG+ ++E EL+ +FS+ H V FIE
Sbjct: 111 NAPCSTLFVANLGQFVSEHELKEVFSSNSSINNNINNNINNNTGQQQQQQQQQHPVAFIE 170
Query: 268 FEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
F D SA+ LQG + SS +RI+Y
Sbjct: 171 FNDAPSAAQAMQQLQGKYLLSSDRGSIRIEY 201
>gi|123994687|gb|ABM84945.1| small nuclear ribonucleoprotein polypeptide B'' [synthetic
construct]
gi|261861662|dbj|BAI47353.1| small nuclear ribonucleoprotein polypeptide B'' [synthetic
construct]
Length = 225
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|119630691|gb|EAX10286.1| small nuclear ribonucleoprotein polypeptide B'', isoform CRA_b
[Homo sapiens]
Length = 242
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|426388779|ref|XP_004060810.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 2 [Gorilla
gorilla gorilla]
Length = 229
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+NPP + LF+ NL E NE L LF+ PGFK+++++ RH + F+EF++ A +
Sbjct: 150 ENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFDNEVQAGAAR 208
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I + + M+I +
Sbjct: 209 DALQGFKITQNNA--MKISF 226
>gi|238590077|ref|XP_002392208.1| hypothetical protein MPER_08250 [Moniliophthora perniciosa FA553]
gi|215457941|gb|EEB93138.1| hypothetical protein MPER_08250 [Moniliophthora perniciosa FA553]
Length = 322
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 41 TNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV 81
TN +A +E+ TIF+ G PDD++ERE QN+ + G+EA+ +
Sbjct: 74 TNGVAQEEISTIFVVGFPDDMQEREFQNMFTFSAGFEAATL 114
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%)
Query: 86 EKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGI 135
++ +GFA F T + A+ A+D LQ D E SVL EMAKKNL KRG+
Sbjct: 203 KQIIGFAKFRTREEALLARDMLQGRRVDIEKGSVLKAEMAKKNLHTKRGV 252
>gi|344257423|gb|EGW13527.1| U2 small nuclear ribonucleoprotein B'' [Cricetulus griseus]
Length = 113
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 207 APSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFI 266
AP+ VP D PP LF+ NL E NE L LF+ PGFK++ L RH + F+
Sbjct: 27 APNPQVP-----DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEV-CLIPGRHDIAFV 80
Query: 267 EFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
EFE+ A + LQG I S + M+I Y
Sbjct: 81 EFENDGQAGAARDALQGFKITPSHA--MKITY 110
>gi|351695324|gb|EHA98242.1| U2 small nuclear ribonucleoprotein B'' [Heterocephalus glaber]
Length = 224
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 145 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 203
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 204 DALQGFKITPSHA--MKITY 221
>gi|395529330|ref|XP_003766769.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Sarcophilus
harrisii]
Length = 241
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+NPP + LF+ NL E NE L LF+ PGFK+++++ RH + F+EF++ A +
Sbjct: 162 ENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFDNEVQAGAAR 220
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I + + M+I +
Sbjct: 221 DALQGFKITQNNA--MKISF 238
>gi|351712152|gb|EHB15071.1| U1 small nuclear ribonucleoprotein A [Heterocephalus glaber]
Length = 272
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 107/251 (42%), Gaps = 22/251 (8%)
Query: 51 TIFITGLPDDVKERELQNLLRWLP---GYEASQVNYKGEKPMGFALFSTAQLAVAAKDAL 107
T+ I L + +KE EL+ L + G+ + + K G AL +++ +A +AL
Sbjct: 11 TVSINNLNEKIKEDELKKSLYAIFSQFGHILDILVSRSLKMRGQALVIFKEVS-SATNAL 69
Query: 108 QEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHA 167
+ M + + AK N + + D+ + R APS A
Sbjct: 70 RSMQGFPFYDKPMRIQYAKANSDIIAKLKGTFVERDRKREKRKP-----KSQEAPSAKKA 124
Query: 168 PPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLF 227
P PPP G+ P QMP P + P P Q +NPP + LF
Sbjct: 125 VQGGAAAPVAASWHDPPP-------GLAPGQMP-PQQI-MPGQMPPAQPLSENPPNHILF 175
Query: 228 IGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIP 287
+ NL E NE L F+ PGF++ +++ RH + F+EF++V A + LQG I
Sbjct: 176 LTNLPEETNELMLSMPFNQFPGFQEARLV-PGRHDIAFVEFDEVQ-AGAAREALQGYKIT 233
Query: 288 SSGSVGMRIQY 298
+ + M+I +
Sbjct: 234 QNNA--MKISF 242
>gi|361128647|gb|EHL00577.1| putative Cell wall integrity protein scw1 [Glarea lozoyensis 74030]
Length = 524
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 204 PVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTV 263
P S+ + + NPPCN L+I NL +E +LR F+ QPGF+ +++ E
Sbjct: 333 PYSTTSTLQSIDSGYGNPPCNNLYIRNLPAEPDEGDLREFFAKQPGFEGIRMKLNEPE-- 390
Query: 264 CFIEFEDVNSA 274
CF++F DV SA
Sbjct: 391 CFVQFSDVQSA 401
>gi|321460285|gb|EFX71329.1| sans fille-like protein [Daphnia pulex]
Length = 227
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ ++
Sbjct: 148 EQPPNQILFLTNLPEETNEMMLSMLFTQFPGFKEVRLV-PGRHDIAFVEFENEVQSAGAR 206
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
+LQG I + S M+I +
Sbjct: 207 ESLQGFKITPTHS--MKISF 224
>gi|840821|emb|CAA44751.1| U2-snRNP-specific b'' [Mus musculus]
Length = 97
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L L + PGFK+++++ RH + F+EFE+ A +
Sbjct: 18 DYPPNYILFLNNLPEETNEMMLSMLLNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 76
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 77 DALQGFKITPSHA--MKITY 94
>gi|357110782|ref|XP_003557195.1| PREDICTED: uncharacterized protein LOC100823400 [Brachypodium
distachyon]
Length = 209
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 35 PVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYK-----GEKP- 88
P P N +R + DE +F+ GLP D K RE+ +L R G++ ++ +K G+K
Sbjct: 91 PNPVLNIDRPSEDESNILFVDGLPTDCKRREVAHLFRPFVGFKDLRLVHKEPRRSGDKAY 150
Query: 89 -MGFALFSTAQLAVAAKDALQEMIFDAETKS--VLHTEMAK 126
+ F F+ A+ A A ALQE FD VL + A+
Sbjct: 151 VLCFVEFNDAKCAFTAMQALQEYRFDERKPDAPVLKIQFAR 191
>gi|12850013|dbj|BAB28565.1| unnamed protein product [Mus musculus]
Length = 225
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE A +
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFEYDGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|426246411|ref|XP_004016988.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Ovis aries]
Length = 225
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAGR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|389747109|gb|EIM88288.1| hypothetical protein STEHIDRAFT_167602 [Stereum hirsutum FP-91666
SS1]
Length = 1172
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 19/120 (15%)
Query: 191 GYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESIN---------EEELR 241
G PP+ P A S V NPP NTL++GNL S EE LR
Sbjct: 894 GSTSPPLGSPDSGASSARSGAV-----DQNPPINTLYVGNLPSSPPPPGQPPNQLEESLR 948
Query: 242 GLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSV---GMRIQY 298
LF +PGF+++ ++ +CF+EF DV+ A+ ++L GA + +G V G+R+ Y
Sbjct: 949 ELFQRRPGFRKLCFRQKSNGPMCFVEFADVSYATRALNDLYGATL--NGLVKGGGIRLSY 1006
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 29/47 (61%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGI 135
+GFA F T A+ A+D LQ D E +VL EMAKKNL KRGI
Sbjct: 549 IGFAKFRTRAEALEARDTLQGRRVDIEKGAVLKAEMAKKNLHTKRGI 595
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 41 TNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV 81
T A +E+ TIF+ G P+D++ERE QN+ + G+EA+ +
Sbjct: 414 TQAAAQEEISTIFVVGFPEDMQEREFQNMFTFSAGFEAATL 454
>gi|392592942|gb|EIW82268.1| hypothetical protein CONPUDRAFT_81796 [Coniophora puteana
RWD-64-598 SS2]
Length = 926
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 29/46 (63%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRG 134
+GFA F T Q A+ A+D LQ D E ++L EMAKKNL KRG
Sbjct: 427 IGFAKFRTRQEALEARDVLQGRRVDIEKGAILKAEMAKKNLHTKRG 472
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 13/75 (17%)
Query: 206 PAPSSYVPVQNTKDNPPCNTLFIGNL--GESIN-------EEELRGLFSAQPGFKQMKVL 256
PAP V QN PP NTL++GNL G N E+ LR LFS QPG++++
Sbjct: 856 PAPRGTVVDQN----PPINTLYVGNLPTGPMPNGYPAGYLEDSLRELFSRQPGYRKLCFR 911
Query: 257 RQERHTVCFIEFEDV 271
++ +CF+E V
Sbjct: 912 QKSNGPMCFVEVSSV 926
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 27/38 (71%)
Query: 44 IAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV 81
+ +E+ TIF+ G P+D++ERE QN+ + G+EA+ +
Sbjct: 285 LQQEEISTIFVVGFPEDMQEREFQNMFTFSAGFEAATL 322
>gi|393216047|gb|EJD01538.1| hypothetical protein FOMMEDRAFT_90081, partial [Fomitiporia
mediterranea MF3/22]
Length = 265
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGI 135
+GFA F T A++A+D LQ D E +VL EMAKKNL KRG+
Sbjct: 197 IGFAKFRTRSEALSARDLLQGRRIDIEKGAVLKAEMAKKNLHTKRGV 243
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 46 HDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV 81
+E+ TIF+ G PDD++ERE QN+ + G+EA+ +
Sbjct: 70 QEEISTIFVVGFPDDMQEREFQNMFTFSSGFEAATL 105
>gi|431894149|gb|ELK03949.1| U2 small nuclear ribonucleoprotein B'' [Pteropus alecto]
Length = 291
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ A +
Sbjct: 208 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENDGQAGAAR 266
Query: 279 HNLQGAVI 286
LQG I
Sbjct: 267 DALQGFKI 274
>gi|225713086|gb|ACO12389.1| U1 small nuclear ribonucleoprotein A [Lepeophtheirus salmonis]
Length = 217
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 221 PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHN 280
PP LF+ NL + NE L LF+ PGFK+++++ RH + F+EFE+ +++ +
Sbjct: 140 PPNQILFLTNLPDETNEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFENEVQSAAARES 198
Query: 281 LQGAVIPSSGSVGMRIQY 298
LQG I + S M+I +
Sbjct: 199 LQGFKITPNAS--MKISF 214
>gi|405974726|gb|EKC39350.1| U1 small nuclear ribonucleoprotein A [Crassostrea gigas]
Length = 541
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL E NE L LF+ PGFK+++ L RH + F+EFE+ + +
Sbjct: 462 EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVR-LVPGRHDIAFVEFENEVQSGAAK 520
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 521 DALQGFKITPSNA--MKISY 538
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 20/100 (20%)
Query: 191 GYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELR-GLFSAQPG 249
Y +P V + A PV D P T++I NL E + ++EL+ L++
Sbjct: 294 AYIIPLVSVSASGPV-----------IMDARPNQTIYINNLNEKVKKDELKKSLYAIFSQ 342
Query: 250 FKQ------MKVLRQERHTVCFIEFEDVNSASSVHHNLQG 283
F Q MK L+ F+ F+D+NSA+S ++QG
Sbjct: 343 FGQILDIVAMKTLKMRGQ--AFVIFKDINSANSALRSMQG 380
>gi|225719260|gb|ACO15476.1| U1 small nuclear ribonucleoprotein A [Caligus clemensi]
Length = 217
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 221 PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHN 280
PP LF+ NL + NE L LF+ PGFK+++++ RH + F+EFE+ +++ +
Sbjct: 140 PPNQILFLTNLPDETNEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFENEVQSAAARES 198
Query: 281 LQGAVIPSSGSVGMRIQY 298
LQG I + S M+I +
Sbjct: 199 LQGFKITPNAS--MKISF 214
>gi|225719682|gb|ACO15687.1| U1 small nuclear ribonucleoprotein A [Caligus clemensi]
Length = 217
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 221 PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHN 280
PP LF+ NL + NE L LF+ PGFK+++++ RH + F+EFE+ +++ +
Sbjct: 140 PPNQILFLTNLPDETNEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFENEVQSAAARES 198
Query: 281 LQGAVIPSSGSVGMRIQY 298
LQG I + S M+I +
Sbjct: 199 LQGFKITPNAS--MKISF 214
>gi|225710606|gb|ACO11149.1| U1 small nuclear ribonucleoprotein A [Caligus rogercresseyi]
Length = 217
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 221 PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHN 280
PP LF+ NL + NE L LF+ PGFK+++++ RH + F+EFE+ +++ +
Sbjct: 140 PPNQILFLTNLPDETNEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFENEVQSAAARES 198
Query: 281 LQGAVIPSSGSVGMRIQY 298
LQG I + S M+I +
Sbjct: 199 LQGFKITPNAS--MKISF 214
>gi|390333482|ref|XP_789234.3| PREDICTED: U1 small nuclear ribonucleoprotein A-like
[Strongylocentrotus purpuratus]
Length = 235
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 14/103 (13%)
Query: 193 GVPPVQMP-APAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFK 251
G PP+Q+P APAPV VP + P N LF+ NL E NE L LF G+K
Sbjct: 141 GQPPIQVPTAPAPV------VP------DEPNNILFLTNLPEETNELMLEVLFKQFNGYK 188
Query: 252 QMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGM 294
+++++ RH + F+EF + + + LQG I + ++ +
Sbjct: 189 EVRLV-PGRHDIAFVEFANEQQSGTAKDALQGFKITPTNTLKI 230
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 29 APPPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKP 88
P P PV D N I +F+T LP++ E L+ L + GY+ ++ G
Sbjct: 147 VPTAPAPVVPDEPNNI-------LFLTNLPEETNELMLEVLFKQFNGYKEVRL-VPGRHD 198
Query: 89 MGFALFSTAQLAVAAKDALQ 108
+ F F+ Q + AKDALQ
Sbjct: 199 IAFVEFANEQQSGTAKDALQ 218
>gi|442760027|gb|JAA72172.1| Putative spliceosomal protein snrnp-u1a/u2b [Ixodes ricinus]
Length = 239
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EFE+ +S+
Sbjct: 158 EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFENEIQSSAAK 216
Query: 279 HNLQGAVI 286
LQG I
Sbjct: 217 EALQGFKI 224
>gi|402588136|gb|EJW82070.1| hypothetical protein WUBG_07021, partial [Wuchereria bancrofti]
Length = 68
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 243 LFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+F A PGF ++++ + TV F+EF DV A+ V + LQG I SS G+RI+Y
Sbjct: 1 VFCAYPGFTRLRLHTRNDTTVAFVEFRDVRQATLVMNALQGCRISSSHRGGIRIEY 56
>gi|334312138|ref|XP_003339722.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like [Monodelphis
domestica]
Length = 180
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ P FK+++ L RH + F+EFE+ A +
Sbjct: 101 DYPPNYILFLNNLPEETNEMMLSMLFNQYPVFKEVR-LGPGRHDIAFVEFENDGQAGAAR 159
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 160 DALQGFKITPSHA--MKITY 177
>gi|290562822|gb|ADD38806.1| U1 small nuclear ribonucleoprotein A [Lepeophtheirus salmonis]
Length = 217
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 221 PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHN 280
PP LF+ NL + NE L LF+ PGFK+++++ RH + F+EFE+ +++ +
Sbjct: 140 PPNQILFLTNLPDETNEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFENEVQSAAARGS 198
Query: 281 LQGAVIPSSGSVGMRIQY 298
LQG I + S M+I +
Sbjct: 199 LQGFKITPNAS--MKISF 214
>gi|330840143|ref|XP_003292080.1| hypothetical protein DICPUDRAFT_89664 [Dictyostelium purpureum]
gi|325077715|gb|EGC31410.1| hypothetical protein DICPUDRAFT_89664 [Dictyostelium purpureum]
Length = 328
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQ-VNYKGEKPMGFALFSTAQLAVAAKDALQE 109
T+F++ LP DV ERE+ L R++ G+ + +N +G+ PM F F +Q A A D LQ
Sbjct: 246 TLFVSNLPKDVTEREVSILFRFMAGFVGIRLINKEGKLPMCFCDFVDSQSAAMALDFLQG 305
Query: 110 MIFD-AETKSVLHTEMAKKN 128
D + S + E + N
Sbjct: 306 FRMDPKDISSSISIEFDRAN 325
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 221 PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQE-RHTVCFIEFEDVNSASSVHH 279
PPC TLF+ NL + + E E+ LF GF ++++ +E + +CF +F D SA+
Sbjct: 242 PPCPTLFVSNLPKDVTEREVSILFRFMAGFVGIRLINKEGKLPMCFCDFVDSQSAAMALD 301
Query: 280 NLQG-AVIPSSGSVGMRIQY 298
LQG + P S + I++
Sbjct: 302 FLQGFRMDPKDISSSISIEF 321
>gi|68074359|ref|XP_679094.1| u1 small nuclear ribonucleoprotein a [Plasmodium berghei strain
ANKA]
gi|56499751|emb|CAH97936.1| u1 small nuclear ribonucleoprotein a, putative [Plasmodium berghei]
Length = 371
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 13/116 (11%)
Query: 185 PYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNP--PCNTLFIGNLGESINEEELRG 242
P Y +P + P A +SY P+QN NP P LF+ N+ E++N E
Sbjct: 264 PLQNNANYNIPSIH---PPHFYAMNSYAPIQN---NPVIPYKILFVENVDENVNTEAFND 317
Query: 243 LFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+F A GF + +++ Q V F+++ D +SA+S LQ + S ++I Y
Sbjct: 318 IFKAFSGFVEARIIPQ--RNVAFVDYTDESSATSAMKALQNYELQGS---KLKISY 368
>gi|126303676|ref|XP_001374230.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like isoform 1
[Monodelphis domestica]
Length = 225
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ P FK+++ L RH + F+EFE+ A +
Sbjct: 146 DYPPNYILFLNNLPEETNEMMLSMLFNQYPVFKEVR-LGPGRHDIAFVEFENDGQAGAAR 204
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 205 DALQGFKITPSHA--MKITY 222
>gi|312372120|gb|EFR20150.1| hypothetical protein AND_20571 [Anopheles darlingi]
Length = 216
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 13/109 (11%)
Query: 190 GGYGVPPVQMPAPAPVPAPSSYVPVQN------------TKDNPPCNTLFIGNLGESINE 237
G + P ++ P PVP Q T + PP LF+ NL E NE
Sbjct: 96 GTFQERPKRVRQPKPVPTEEKKSKKQKAAGEVGATNNSATAEQPPNQILFLTNLPEETNE 155
Query: 238 EELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVI 286
L LF+ PGFK+++++ RH + F+EF + + LQG I
Sbjct: 156 MMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFASEVQSGAAREALQGFKI 203
>gi|328875060|gb|EGG23425.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 302
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMK-VLRQERHTVCFIEFEDVNSASSVHHN 280
P +TLF+ NL + + E EL LF GF + V+R+ ++ +CF +F D+ SA
Sbjct: 213 PQSTLFVSNLPKDVTERELSILFRFMRGFISCRLVIREGKYPICFCDFRDIPSAIMAMEI 272
Query: 281 LQGAVI-PSSGSVGMRIQY 298
LQG + P+ S + I++
Sbjct: 273 LQGYRMDPNDVSSSISIEF 291
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQ-VNYKGEKPMGFALFSTAQLAVAAKDALQ 108
T+F++ LP DV EREL L R++ G+ + + V +G+ P+ F F A+ A + LQ
Sbjct: 216 TLFVSNLPKDVTERELSILFRFMRGFISCRLVIREGKYPICFCDFRDIPSAIMAMEILQ 274
>gi|218197575|gb|EEC80002.1| hypothetical protein OsI_21654 [Oryza sativa Indica Group]
Length = 232
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 27 AAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGE 86
A+ P P P N + DE +F+ GLP D RE+ +L R G++ ++ +K
Sbjct: 105 ASIPDVEHPRPLLNLDGPREDESNILFVDGLPTDCTRREVAHLFRPFVGFKDIRLVHKEP 164
Query: 87 KP-------MGFALFSTAQLAVAAKDALQEMIFDAET--KSVLHTEMAK 126
+ + F FS A+ A+ A +ALQE FD +VL+ + A+
Sbjct: 165 RHSSDRAYVLCFVEFSDAKCAITAMEALQEYRFDERKPDAAVLNIKFAR 213
>gi|145500107|ref|XP_001436037.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403175|emb|CAK68640.1| unnamed protein product [Paramecium tetraurelia]
Length = 158
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 221 PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHN 280
P L+IGNL + +++L LF ++KVL + H F+EFE V A +++
Sbjct: 3 EPKKKLWIGNLAYKVQKDDLEELFKQYGQITEIKVLDKGPHVYAFVEFEKVEKAIEAYNS 62
Query: 281 LQGAVIPSSGSVGMRIQY 298
LQG + M+I+Y
Sbjct: 63 LQGRELKGQ---AMKIEY 77
>gi|443720886|gb|ELU10438.1| hypothetical protein CAPTEDRAFT_179768 [Capitella teleta]
Length = 218
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP + LF+ NL E E L LF+ PGF++++++ RH + F+EFE+ A +
Sbjct: 139 DQPPHHILFLTNLPEETTEMMLSMLFNQFPGFREVRLV-PGRHDIAFVEFENEVQAGAAK 197
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I + + M+I +
Sbjct: 198 DALQGFKITPTNA--MKISF 215
>gi|328853728|gb|EGG02865.1| cell wall integrity protein scw1 [Melampsora larici-populina
98AG31]
Length = 1119
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 34 PPVPYDNTNRIAH--DEVRTIFITGLPDDVKERELQNLLRWLPGYEASQV 81
P P + + RI +E+ TIF+ G P+D+ ERE QN+ + PG+EA+ +
Sbjct: 419 PISPTNRSGRIEQVAEEISTIFVVGFPEDMDEREFQNMFMFSPGFEAATL 468
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 89 MGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNA 141
+GFA F T A+ A+D L DAE +L E+AKKNL KRG+ + +A
Sbjct: 567 IGFAKFKTRADALHARDVLSGRRVDAEKGCILKAELAKKNLHTKRGLSNEASA 619
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 237 EEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRI 296
E+ LR LF GFK+ + +CF+EF +V +A NL G + G+R+
Sbjct: 978 EDRLRKLFGKAEGFKRFSFRSKAGQPMCFVEFVNVEAAKKAMENLYGDRLDGLVPGGIRL 1037
Query: 297 QY 298
+
Sbjct: 1038 AF 1039
>gi|255710361|gb|ACU31000.1| U1 small nuclear ribonucleoprotein A [Ochlerotatus triseriatus]
Length = 202
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 217 TKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASS 276
T + PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EF + +
Sbjct: 121 TAEQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFATELQSGA 179
Query: 277 VHHNLQGAVI 286
LQG I
Sbjct: 180 AREALQGFKI 189
>gi|166240105|ref|XP_646953.2| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|165988745|gb|EAL73083.2| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 356
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQ-VNYKGEKPMGFALFSTAQLAVAAKDALQE 109
T+F++ LP DV EREL L R++ G+ + +N +G+ PM F F Q ++ A + LQ
Sbjct: 273 TLFVSNLPKDVTERELSILFRFMRGFVGIRLINKEGKLPMCFCDFIDTQSSMFALEFLQG 332
Query: 110 MIFDA 114
DA
Sbjct: 333 FRMDA 337
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT-VCFIEFEDVNSASSVHHN 280
PC+TLF+ NL + + E EL LF GF ++++ +E +CF +F D S+
Sbjct: 270 PCSTLFVSNLPKDVTERELSILFRFMRGFVGIRLINKEGKLPMCFCDFIDTQSSMFALEF 329
Query: 281 LQG 283
LQG
Sbjct: 330 LQG 332
>gi|307190556|gb|EFN74543.1| U1 small nuclear ribonucleoprotein A [Camponotus floridanus]
Length = 184
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL + +E L LF+ PGFK+++++ RH + F+EFE+ + +
Sbjct: 105 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFENEVQSGAAK 163
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I +
Sbjct: 164 DALQGFKITPSHA--MKISF 181
>gi|195389855|ref|XP_002053589.1| GJ23264 [Drosophila virilis]
gi|194151675|gb|EDW67109.1| GJ23264 [Drosophila virilis]
Length = 274
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 60 DVKERELQNLLRWLPGYEASQV-----NYKGEKPMGFALFSTAQLAVAAKDALQEMIFDA 114
D K REL L R GYE S + N K P+GF F T A AAK LQ + FD
Sbjct: 2 DAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASPVGFVTFHTRAGAEAAKQDLQGVRFDP 61
Query: 115 ETKSVLHTEMAKKNLFVKR 133
+ + E AK N V +
Sbjct: 62 DMPQTIRLEFAKSNTKVSK 80
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 21/26 (80%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFS 245
N PC+TLF+ NLG+ ++E EL+ +FS
Sbjct: 248 NAPCSTLFVANLGQFVSEHELKEVFS 273
>gi|281211458|gb|EFA85620.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 355
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 213 PVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQE-RHTVCFIEFEDV 271
P + KD C+TLF+ NL + + E EL LF GF ++++++E ++ +CF +F D
Sbjct: 262 PSYDLKD--ACSTLFVSNLPKDVTERELSILFRFMRGFINVRLVQREGKYPICFCDFRDT 319
Query: 272 NSASSVHHNLQG 283
SA+ L G
Sbjct: 320 LSAAGAMEMLNG 331
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 47 DEVRTIFITGLPDDVKERELQNLLRWLPGY-EASQVNYKGEKPMGFALFSTAQLAVAAKD 105
D T+F++ LP DV EREL L R++ G+ V +G+ P+ F F A A +
Sbjct: 268 DACSTLFVSNLPKDVTERELSILFRFMRGFINVRLVQREGKYPICFCDFRDTLSAAGAME 327
Query: 106 ALQEMIFDAETKSV 119
L F +TK +
Sbjct: 328 MLNG--FKMDTKDI 339
>gi|224128458|ref|XP_002320337.1| predicted protein [Populus trichocarpa]
gi|222861110|gb|EEE98652.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
Query: 189 YGG-YGVPP--VQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFS 245
YGG YG P +Q+P P V + P PP N LFI NL L+ LF
Sbjct: 125 YGGAYGTTPSLLQIPYPGGVKSMVPEAPA------PPNNILFIQNLPNETTPMMLQMLFQ 178
Query: 246 AQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
PGFK+++++ + + + F+E+ D ++ H LQG I S M I Y
Sbjct: 179 QYPGFKEVRMV-EAKPGIAFVEYGDEMQSTGAMHGLQGFKILQQNS--MLITY 228
>gi|222634881|gb|EEE65013.1| hypothetical protein OsJ_19964 [Oryza sativa Japonica Group]
Length = 265
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 32 PPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGY-EASQVNYKGEKPMG 90
P PP+P D +N T+FI G+P D RE+ ++ R G+ E V+ + P G
Sbjct: 153 PEPPLPPDASN--------TLFIEGIPTDCARREVSHIFRPFVGFREVRLVSKEARHPGG 204
Query: 91 ------FALFSTAQLAVAAKDALQEMIFDAETKSVLHTEM 124
F F TA A A DALQ FD ++ H +
Sbjct: 205 DPILLCFVDFETASQAAIAMDALQGYKFDEHDRNSPHLRL 244
>gi|195448090|ref|XP_002071505.1| GK25839 [Drosophila willistoni]
gi|194167590|gb|EDW82491.1| GK25839 [Drosophila willistoni]
Length = 216
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 200 PAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQE 259
PA APS+ + PP LF+ NL E NE L LF+ PGFK+++++
Sbjct: 124 PASTENAAPSTQT------EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV-PN 176
Query: 260 RHTVCFIEFEDVNSASSVHHNLQGAVI 286
RH + F+EF +++ LQG I
Sbjct: 177 RHDIAFVEFTTELQSNAAKEALQGFKI 203
>gi|170070159|ref|XP_001869484.1| U1 small nuclear ribonucleoprotein A [Culex quinquefasciatus]
gi|167866053|gb|EDS29436.1| U1 small nuclear ribonucleoprotein A [Culex quinquefasciatus]
Length = 216
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 217 TKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASS 276
T + PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EF + +
Sbjct: 135 TAEQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFATELQSGA 193
Query: 277 VHHNLQGAVI 286
LQG I
Sbjct: 194 AREALQGFKI 203
>gi|322797045|gb|EFZ19352.1| hypothetical protein SINV_13322 [Solenopsis invicta]
Length = 152
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL + +E L LF+ PGFK+++++ RH + F+EFE+ + +
Sbjct: 73 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFENEVQSGAAK 131
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I +
Sbjct: 132 DALQGFKITPSHA--MKISF 149
>gi|118485733|gb|ABK94716.1| unknown [Populus trichocarpa]
Length = 254
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
Query: 189 YGG-YGVPP--VQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFS 245
YGG YG P +Q+P P V + P PP N LFI NL L+ LF
Sbjct: 148 YGGAYGTTPSLLQIPYPGGVKSMVPEAPA------PPNNILFIQNLPNETTPMMLQMLFQ 201
Query: 246 AQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
PGFK+++++ + + + F+E+ D ++ H LQG I S M I Y
Sbjct: 202 QYPGFKEVRMV-EAKPGIAFVEYGDEMQSTGAMHGLQGFKILQQNS--MLITY 251
>gi|146183888|ref|XP_001027266.2| U1 small nuclear ribonucleoprotein A [Tetrahymena thermophila]
gi|146143436|gb|EAS07024.2| U1 small nuclear ribonucleoprotein A [Tetrahymena thermophila
SB210]
Length = 247
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 214 VQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNS 273
VQNT P +TLF+ NL + N E ++ F+ PGFK+++++ Q+R V F+E+ED N
Sbjct: 166 VQNTII-QPHHTLFLENLPINSNTEVIKAFFATFPGFKEVRLVPQKR--VAFVEYEDENK 222
Query: 274 ASSVHHNLQGAVI 286
A++ +LQ I
Sbjct: 223 ATAALASLQSFKI 235
>gi|332022263|gb|EGI62578.1| U2 small nuclear ribonucleoprotein B'' [Acromyrmex echinatior]
Length = 184
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL + +E L LF+ PGFK+++++ RH + F+EFE+ + +
Sbjct: 105 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFENEVQSGAAK 163
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I +
Sbjct: 164 DALQGFKITPSHA--MKISF 181
>gi|198434778|ref|XP_002132163.1| PREDICTED: similar to GH24608 isoform 1 [Ciona intestinalis]
Length = 216
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHH 279
NPP + LF+ NL EE L LF+ GFK+++++ RH + F+EFE AS
Sbjct: 138 NPPNHILFLNNLPPETQEEMLNMLFNRFNGFKEVRLV-PGRHDIAFVEFEGEQQASEAKG 196
Query: 280 NLQGAVIPSSGSV 292
LQG I S ++
Sbjct: 197 ALQGFKISPSNAM 209
>gi|383847977|ref|XP_003699629.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Megachile
rotundata]
Length = 231
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL + +E L LF+ PGFK+++++ RH + F+EFE+ + +
Sbjct: 152 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFENEVQSGAAK 210
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I +
Sbjct: 211 DALQGFKITPSHA--MKISF 228
>gi|58394659|ref|XP_320869.2| AGAP011637-PA [Anopheles gambiae str. PEST]
gi|55235062|gb|EAA00418.2| AGAP011637-PA [Anopheles gambiae str. PEST]
Length = 216
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 217 TKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASS 276
T + PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EF + +
Sbjct: 135 TAEQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFATELQSGA 193
Query: 277 VHHNLQGAVI 286
LQG I
Sbjct: 194 AREALQGFKI 203
>gi|340726396|ref|XP_003401545.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like [Bombus
terrestris]
gi|350423999|ref|XP_003493658.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Bombus
impatiens]
Length = 233
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL + +E L LF+ PGFK+++++ RH + F+EFE+ + +
Sbjct: 154 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFENEVQSGAAK 212
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I +
Sbjct: 213 DALQGFKITPSHA--MKISF 230
>gi|198434776|ref|XP_002132167.1| PREDICTED: similar to GH24608 isoform 2 [Ciona intestinalis]
Length = 220
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHH 279
NPP + LF+ NL EE L LF+ GFK+++++ RH + F+EFE AS
Sbjct: 142 NPPNHILFLNNLPPETQEEMLNMLFNRFNGFKEVRLV-PGRHDIAFVEFEGEQQASEAKG 200
Query: 280 NLQGAVIPSSGSV 292
LQG I S ++
Sbjct: 201 ALQGFKISPSNAM 213
>gi|145531303|ref|XP_001451420.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419071|emb|CAK84023.1| unnamed protein product [Paramecium tetraurelia]
Length = 158
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 221 PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHN 280
P L+IGNL + +++L LF ++KVL + H F+EFE V A ++
Sbjct: 3 EPKKKLWIGNLAYKVQKDDLEELFKQYGQITEIKVLDKGPHVYAFVEFEKVEKAIDAFNS 62
Query: 281 LQGAVIPSSGSVGMRIQY 298
LQG + M+I+Y
Sbjct: 63 LQGRELKGQ---AMKIEY 77
>gi|156548050|ref|XP_001606482.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 1
[Nasonia vitripennis]
gi|345485456|ref|XP_003425274.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 2
[Nasonia vitripennis]
Length = 230
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL + +E L LF+ PGFK+++++ RH + F+EFE+ + +
Sbjct: 151 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFENEVQSGAAK 209
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I +
Sbjct: 210 DALQGFKITPSHA--MKISF 227
>gi|307195443|gb|EFN77329.1| U2 small nuclear ribonucleoprotein B'' [Harpegnathos saltator]
Length = 231
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL + +E L LF+ PGFK+++++ RH + F+EFE+ + +
Sbjct: 152 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFENEVQSGAAK 210
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I +
Sbjct: 211 DALQGFKITPSHA--MKISF 228
>gi|91078752|ref|XP_968271.1| PREDICTED: similar to U1 small nuclear ribonucleoprotein A
[Tribolium castaneum]
gi|270003743|gb|EFA00191.1| hypothetical protein TcasGA2_TC003016 [Tribolium castaneum]
Length = 214
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 212 VPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDV 271
+P + + PP LF+ NL + +E L LF+ PGFK+++++ RH + F+EFE+
Sbjct: 128 IPGGSNAEQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFENE 186
Query: 272 NSASSVHHNLQGAVI 286
+ + LQG I
Sbjct: 187 LQSGAAKDALQGFKI 201
>gi|195554301|ref|XP_002076873.1| GD24751 [Drosophila simulans]
gi|194202891|gb|EDX16467.1| GD24751 [Drosophila simulans]
Length = 169
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EF +++
Sbjct: 90 EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFTTELQSNAAK 148
Query: 279 HNLQGAVI 286
LQG I
Sbjct: 149 EALQGFKI 156
>gi|270047496|ref|NP_001161808.1| U1 small nuclear ribonucleoprotein A [Apis mellifera]
Length = 231
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL + +E L LF+ PGFK+++++ RH + F+EFE+ + +
Sbjct: 152 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFENEVQSGAAK 210
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I +
Sbjct: 211 DALQGFKITPSHA--MKISF 228
>gi|380024353|ref|XP_003695965.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Apis
florea]
Length = 231
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL + +E L LF+ PGFK+++++ RH + F+EFE+ + +
Sbjct: 152 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFENEVQSGAAK 210
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I +
Sbjct: 211 DALQGFKITPSHA--MKISF 228
>gi|157103841|ref|XP_001648152.1| U1 small nuclear ribonucleoprotein A [Aedes aegypti]
gi|157133359|ref|XP_001656219.1| U1 small nuclear ribonucleoprotein A [Aedes aegypti]
gi|108869334|gb|EAT33559.1| AAEL014167-PA [Aedes aegypti]
gi|108881556|gb|EAT45781.1| AAEL002980-PA [Aedes aegypti]
Length = 216
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EF + +
Sbjct: 137 EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFATELQSGAAR 195
Query: 279 HNLQGAVI 286
LQG I
Sbjct: 196 EALQGFKI 203
>gi|351712556|gb|EHB15475.1| U2 small nuclear ribonucleoprotein B'' [Heterocephalus glaber]
Length = 143
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L F+ PGFK++ ++ RH + F+EFE+ A +
Sbjct: 67 DYPPKYILFLNNLPEETNEVML---FNQFPGFKEIHLV-PGRHDIAFVEFENDGQAGAAR 122
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I S + M+I Y
Sbjct: 123 DALQGFKITPSHA--MKITY 140
>gi|302832471|ref|XP_002947800.1| hypothetical protein VOLCADRAFT_103581 [Volvox carteri f.
nagariensis]
gi|300267148|gb|EFJ51333.1| hypothetical protein VOLCADRAFT_103581 [Volvox carteri f.
nagariensis]
Length = 224
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHH 279
N P LF+ NL E+ NE L LF PGF++++++ + R + F+EFE+ +++
Sbjct: 146 NAPNKILFVQNLPENSNEAMLGMLFQQFPGFREVRMV-EARPGIAFVEFENDMQSTTAMQ 204
Query: 280 NLQGAVIPSSGSVGMRIQY 298
LQG I + + M I Y
Sbjct: 205 GLQGFKITPANA--MNISY 221
>gi|194763787|ref|XP_001964014.1| GF21334 [Drosophila ananassae]
gi|190618939|gb|EDV34463.1| GF21334 [Drosophila ananassae]
Length = 216
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EF +++
Sbjct: 137 EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFTTELQSNAAK 195
Query: 279 HNLQGAVI 286
LQG I
Sbjct: 196 EALQGFKI 203
>gi|195046460|ref|XP_001992159.1| GH24608 [Drosophila grimshawi]
gi|193893000|gb|EDV91866.1| GH24608 [Drosophila grimshawi]
Length = 216
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EF +++
Sbjct: 137 EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFTTELQSNAAK 195
Query: 279 HNLQGAVI 286
LQG I
Sbjct: 196 EALQGFKI 203
>gi|444708342|gb|ELW49419.1| U2 small nuclear ribonucleoprotein B'' [Tupaia chinensis]
gi|444708343|gb|ELW49420.1| U2 small nuclear ribonucleoprotein B'' [Tupaia chinensis]
Length = 130
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL E NE L LF+ PGFK+++ L RH F+EFE+ A +
Sbjct: 68 DYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVR-LAPGRHDSAFVEFENDGQAGAAG 126
Query: 279 HNLQ 282
LQ
Sbjct: 127 DALQ 130
>gi|17737284|ref|NP_511045.1| sans fille [Drosophila melanogaster]
gi|1173325|sp|P43332.1|SNRPA_DROME RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A; AltName: Full=Sex
determination protein snf
gi|157172|gb|AAA28441.1| small nuclear ribonucleoprotein [Drosophila melanogaster]
gi|463051|gb|AAA28903.1| nuclear protein [Drosophila melanogaster]
gi|7290566|gb|AAF46017.1| sans fille [Drosophila melanogaster]
gi|16769640|gb|AAL29039.1| LD45302p [Drosophila melanogaster]
gi|220944458|gb|ACL84772.1| snf-PA [synthetic construct]
gi|220954252|gb|ACL89669.1| snf-PA [synthetic construct]
Length = 216
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL E NE L LF+ PGFK+++ L RH + F+EF +++
Sbjct: 137 EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVR-LVPNRHDIAFVEFTTELQSNAAK 195
Query: 279 HNLQGAVI 286
LQG I
Sbjct: 196 EALQGFKI 203
>gi|195476907|ref|XP_002100029.1| GE16390 [Drosophila yakuba]
gi|194187553|gb|EDX01137.1| GE16390 [Drosophila yakuba]
Length = 216
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EF +++
Sbjct: 137 EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFTTELQSNAAK 195
Query: 279 HNLQGAVI 286
LQG I
Sbjct: 196 EALQGFKI 203
>gi|195340669|ref|XP_002036935.1| GM12396 [Drosophila sechellia]
gi|194131051|gb|EDW53094.1| GM12396 [Drosophila sechellia]
Length = 216
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EF +++
Sbjct: 137 EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFTTELQSNAAK 195
Query: 279 HNLQGAVI 286
LQG I
Sbjct: 196 EALQGFKI 203
>gi|145323766|ref|NP_001077472.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332189939|gb|AEE28060.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 200
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 221 PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHN 280
PP N LFI NL N L+ LF PGFK+++++ + + + F+E+ED +S
Sbjct: 123 PPNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMI-EAKPGIAFVEYEDDVQSSMAMQA 181
Query: 281 LQGAVI 286
LQG I
Sbjct: 182 LQGFKI 187
>gi|90077244|dbj|BAE88302.1| unnamed protein product [Macaca fascicularis]
Length = 197
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNL 281
P + LF+ NL E NE L LF+ PGFK+++++ RH + F+EF++ A + L
Sbjct: 121 PNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV-PGRHDIAFVEFDNEVQAGAARDAL 179
Query: 282 QGAVIPSSGSVGMRIQY 298
QG I + + M+I +
Sbjct: 180 QGFKITQNNA--MKISF 194
>gi|50408254|ref|XP_456766.1| DEHA2A10010p [Debaryomyces hansenii CBS767]
gi|49652430|emb|CAG84729.1| DEHA2A10010p [Debaryomyces hansenii CBS767]
Length = 463
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 226 LFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERH---TVCFIEFEDVNSASSVHHNLQ 282
L++G L +S+++E L+ LF+ + +K+L + FIEFE+ SA H L
Sbjct: 100 LYVGGLHKSVSDEMLKDLFAVAGAIQSVKILNDKNRPGFNYAFIEFENTQSADMALHTLN 159
Query: 283 GAVIPSS 289
G +I +S
Sbjct: 160 GRIINNS 166
>gi|374256077|gb|AEZ00900.1| putative RNA recognition motif-containing protein, partial [Elaeis
guineensis]
Length = 294
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
Query: 32 PPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGY-EASQVNYKGEKPMG 90
P PP+P D +N T+F+ GLP + RE+ ++ R G+ E VN + P G
Sbjct: 171 PEPPLPQDASN--------TLFVEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGG 222
Query: 91 ------FALFSTAQLAVAAKDALQEMIFDAETKSVLHTEM 124
F FST A A DALQ FD + + +
Sbjct: 223 DPLVLCFVDFSTPAQAAVALDALQGYKFDEHDRESANLRL 262
>gi|195396809|ref|XP_002057021.1| GJ16850 [Drosophila virilis]
gi|194146788|gb|EDW62507.1| GJ16850 [Drosophila virilis]
Length = 216
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EF +++
Sbjct: 137 EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFTTELQSNAAK 195
Query: 279 HNLQGAVI 286
LQG I
Sbjct: 196 EALQGFKI 203
>gi|194888638|ref|XP_001976948.1| GG18748 [Drosophila erecta]
gi|190648597|gb|EDV45875.1| GG18748 [Drosophila erecta]
Length = 216
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EF +++
Sbjct: 137 EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFTTELQSNAAK 195
Query: 279 HNLQGAVI 286
LQG I
Sbjct: 196 EALQGFKI 203
>gi|125983292|ref|XP_001355411.1| GA18235 [Drosophila pseudoobscura pseudoobscura]
gi|195162057|ref|XP_002021872.1| GL14287 [Drosophila persimilis]
gi|54643726|gb|EAL32469.1| GA18235 [Drosophila pseudoobscura pseudoobscura]
gi|194103770|gb|EDW25813.1| GL14287 [Drosophila persimilis]
Length = 216
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EF +++
Sbjct: 137 EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFTTELQSNAAK 195
Query: 279 HNLQGAVI 286
LQG I
Sbjct: 196 EALQGFKI 203
>gi|195134172|ref|XP_002011511.1| snf [Drosophila mojavensis]
gi|193906634|gb|EDW05501.1| snf [Drosophila mojavensis]
Length = 216
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EF +++
Sbjct: 137 EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFTTELQSNAAK 195
Query: 279 HNLQGAVI 286
LQG I
Sbjct: 196 EALQGFKI 203
>gi|363807398|ref|NP_001242381.1| uncharacterized protein LOC100816255 [Glycine max]
gi|255647054|gb|ACU23995.1| unknown [Glycine max]
Length = 220
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 16/100 (16%)
Query: 193 GVPPVQMPAPAPVPAPSSY--VPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGF 250
GVP V PA + SSY +P+ N LF+G L + E+ LF G+
Sbjct: 94 GVPDVSSERPA---SKSSYDGLPISAAD----SNILFVGGLPKDCTRREVGHLFRPFIGY 146
Query: 251 KQMKVLRQE-------RHTVCFIEFEDVNSASSVHHNLQG 283
K ++V+ +E T+CF+EF D N A + LQG
Sbjct: 147 KDIRVVHKEPRRSGDKAMTLCFVEFVDSNCALTALETLQG 186
>gi|8954049|gb|AAF82223.1|AC067971_31 Strong similarity to a small nuclear ribonucleoprotein U2B'' -
potato from Solanum tuberosum gb|M72892. It contains an
RNA recognition motif PF|00076. ESTs gb|AA041158 and
gb|AI992475 come from this gene [Arabidopsis thaliana]
Length = 247
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 221 PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHN 280
PP N LFI NL N L+ LF PGFK+++++ + + + F+E+ED +S
Sbjct: 170 PPNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMI-EAKPGIAFVEYEDDVQSSMAMQA 228
Query: 281 LQGAVI 286
LQG I
Sbjct: 229 LQGFKI 234
>gi|15240750|ref|NP_196346.1| MEI2-like protein 4 [Arabidopsis thaliana]
gi|75335654|sp|Q9LYN7.1|AML4_ARATH RecName: Full=Protein MEI2-like 4; Short=AML4; AltName:
Full=MEI2-like protein 4
gi|7546707|emb|CAB87285.1| Mei2-like protein [Arabidopsis thaliana]
gi|110742203|dbj|BAE99028.1| Mei2-like protein [Arabidopsis thaliana]
gi|332003750|gb|AED91133.1| MEI2-like protein 4 [Arabidopsis thaliana]
Length = 907
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 212 VPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDV 271
+P +N K+N L++ NL SI+ EEL G+FS+ ++++ E V +IEF DV
Sbjct: 283 IPKENPKENSSEGALWVNNLDSSISNEELHGIFSSYGEIREVRRTMHENSQV-YIEFFDV 341
Query: 272 NSASSVHHNLQGAVI 286
A L G +
Sbjct: 342 RKAKVALQGLNGLEV 356
>gi|326512082|dbj|BAJ96022.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 233
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 88/242 (36%), Gaps = 36/242 (14%)
Query: 50 RTIFITGLPDDVKERELQNLLRWLP---GYEASQVNYKGEKPMG--FALFSTAQLAVAAK 104
+T++ L + VK+ EL+ L L G V K K G + FS A A
Sbjct: 10 QTVYFKNLNEKVKKEELKRSLYALCSQYGRIVDVVALKTHKLRGQAWVAFSEITAATNAF 69
Query: 105 DALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSP 164
LQ+ F + V + + K + F K AD G Y
Sbjct: 70 RGLQDFDFYGKKMRVQYAK-TKSDCFAK----AD-------------GSYAPKEKRKKQE 111
Query: 165 FHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCN 224
A G P P G G P + P PA PP N
Sbjct: 112 EKAAEKKRRTEDGQQPGANAPVAPSNGTGHQPSRFAKPPQEPAA------------PPNN 159
Query: 225 TLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGA 284
LF+ NL + L+ LF PGF++++++ + + + F+E+ED N + LQG
Sbjct: 160 ILFLQNLPDQTTSVMLQILFQQYPGFREVRMI-EAKPGIAFVEYEDENQSMVAMEALQGF 218
Query: 285 VI 286
I
Sbjct: 219 KI 220
>gi|19347861|gb|AAL85989.1| putative spliceosomal protein (U2B) [Arabidopsis thaliana]
Length = 228
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 221 PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHN 280
PP N LFI NL N L+ LF PGFK+++++ + + + F+E+ED +S
Sbjct: 151 PPNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMI-EAKPGIAFVEYEDDVQSSMAMQA 209
Query: 281 LQGAVI 286
LQG I
Sbjct: 210 LQGFKI 215
>gi|30679897|ref|NP_172177.3| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332189938|gb|AEE28059.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 228
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 221 PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHN 280
PP N LFI NL N L+ LF PGFK+++++ + + + F+E+ED +S
Sbjct: 151 PPNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMI-EAKPGIAFVEYEDDVQSSMAMQA 209
Query: 281 LQGAVI 286
LQG I
Sbjct: 210 LQGFKI 215
>gi|30679892|ref|NP_850936.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75329133|sp|Q8H1S6.1|RU2B2_ARATH RecName: Full=U2 small nuclear ribonucleoprotein B'' 2; Short=U2
snRNP B'' 2
gi|23296313|gb|AAN13038.1| putative spliceosomal protein (U2B) [Arabidopsis thaliana]
gi|332189937|gb|AEE28058.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 229
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 221 PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHN 280
PP N LFI NL N L+ LF PGFK+++++ + + + F+E+ED +S
Sbjct: 152 PPNNILFIHNLPIETNSMMLQLLFEQYPGFKEIRMI-EAKPGIAFVEYEDDVQSSMAMQA 210
Query: 281 LQGAVI 286
LQG I
Sbjct: 211 LQGFKI 216
>gi|21593001|gb|AAM64950.1| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
Length = 232
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 205 VPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVC 264
VPAPS Q T PP N LFI NL L+ LF PGFK+++++ + +
Sbjct: 141 VPAPSFQPSGQETM--PPNNILFIQNLPHETTSMMLQLLFEQYPGFKEIRMI-DAKPGIA 197
Query: 265 FIEFEDVNSASSVHHNLQGAVI 286
F+E+ED AS LQG I
Sbjct: 198 FVEYEDDVQASIAMQPLQGFKI 219
>gi|448111784|ref|XP_004201926.1| Piso0_001392 [Millerozyma farinosa CBS 7064]
gi|359464915|emb|CCE88620.1| Piso0_001392 [Millerozyma farinosa CBS 7064]
Length = 422
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 226 LFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERH---TVCFIEFEDVNSASSVHHNLQ 282
L++G L +S++E+ LR LFS+ G K +K L + + F+EFE+ +SA L
Sbjct: 74 LYVGGLHKSVSEDVLRDLFSSCGGVKSIKTLNDKNRPGFSYAFVEFENTDSAELALRTLN 133
Query: 283 GAVIPSS 289
G ++ +S
Sbjct: 134 GRMVNNS 140
>gi|340377267|ref|XP_003387151.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Amphimedon
queenslandica]
Length = 403
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 67/169 (39%), Gaps = 24/169 (14%)
Query: 32 PPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEASQVNYKG--EKPM 89
P P VP ++R IF+ GL D E +++ E Q+ Y +
Sbjct: 128 PKPAVPKRGNKPTPASQIRRIFVGGLSSDTDEDDMKEFFEVFGPVEEVQLMYDKHTNRHR 187
Query: 90 GFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLR 149
GF + ++ AAK S+ ++ KK + VK + A+ Q+ + R
Sbjct: 188 GFGFVTFEKVGPAAK-----------VCSIQFHDLKKKRVEVKVAQTKEALAH-QADKAR 235
Query: 150 TGGDYTHTGYSAPSPF---HAPPAPVWGPHGYMAPPPPPYDPYGGYGVP 195
Y Y+A SP ++P P + PH MA YGGYG P
Sbjct: 236 AAVSYNQHNYAAGSPAAFNYSPTYPSFFPHYPMA-------YYGGYGYP 277
>gi|156402885|ref|XP_001639820.1| predicted protein [Nematostella vectensis]
gi|156226951|gb|EDO47757.1| predicted protein [Nematostella vectensis]
Length = 209
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 201 APAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER 260
A AP+ AP + +P Q + + P N LF+ NL E L LF+ PGFK+++ L R
Sbjct: 115 AGAPIAAPMA-IPTQ--QPDLPNNILFLTNLPMETTELMLSMLFNQFPGFKEVR-LVPGR 170
Query: 261 HTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+ F+EFE+ A + LQG I + + M I Y
Sbjct: 171 SDISFVEFENEVQAGTAKDALQGFRITPTNA--MSISY 206
>gi|260827881|ref|XP_002608892.1| hypothetical protein BRAFLDRAFT_124249 [Branchiostoma floridae]
gi|229294246|gb|EEN64902.1| hypothetical protein BRAFLDRAFT_124249 [Branchiostoma floridae]
Length = 256
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 191 GYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGF 250
G G PP QM +P + Q + PP N LF+ NL E E L LF+ PGF
Sbjct: 154 GMGQPPQQM-----MPGMAQPSQPQPQAEQPPNNILFLTNLPEETTEMMLSMLFNQFPGF 208
Query: 251 KQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVI 286
K+++++ RH + F+EF++ + + LQG I
Sbjct: 209 KEVRLV-PGRHDIAFVEFDNEMQSGAARDALQGFKI 243
>gi|297826425|ref|XP_002881095.1| hypothetical protein ARALYDRAFT_320780 [Arabidopsis lyrata subsp.
lyrata]
gi|297326934|gb|EFH57354.1| hypothetical protein ARALYDRAFT_320780 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 205 VPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVC 264
VPAPS P + PP N LFI NL L+ LF PGFK+++++ + +
Sbjct: 141 VPAPS--FPPSGQEAMPPNNILFIQNLPHETTSMMLQLLFEQYPGFKEIRMI-DAKPGIA 197
Query: 265 FIEFEDVNSASSVHHNLQGAVI 286
F+E+ED AS LQG I
Sbjct: 198 FVEYEDDVQASIAMQPLQGFKI 219
>gi|15227729|ref|NP_180585.1| U2 small nuclear ribonucleoprotein B'' [Arabidopsis thaliana]
gi|75318049|sp|O22922.1|RU2B1_ARATH RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|2347192|gb|AAC16931.1| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
gi|27765024|gb|AAO23633.1| At2g30260 [Arabidopsis thaliana]
gi|110743428|dbj|BAE99600.1| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
gi|330253269|gb|AEC08363.1| U2 small nuclear ribonucleoprotein B'' [Arabidopsis thaliana]
Length = 232
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 205 VPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVC 264
VPAPS Q T PP N LFI NL L+ LF PGFK+++++ + +
Sbjct: 141 VPAPSFQPSGQETM--PPNNILFIQNLPHETTSMMLQLLFEQYPGFKEIRMI-DAKPGIA 197
Query: 265 FIEFEDVNSASSVHHNLQGAVI 286
F+E+ED AS LQG I
Sbjct: 198 FVEYEDDVQASIAMQPLQGFKI 219
>gi|224286216|gb|ACN40817.1| unknown [Picea sitchensis]
Length = 308
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 190 GGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPG 249
GG G+ P P + S++ + K + NT+FI L + E+ +F G
Sbjct: 170 GGVGIDPALARLPDSAISGSTFRLPDHLKPDESSNTIFIEGLPADCSRREVAHIFRPFIG 229
Query: 250 FKQMKVLRQ-------ERHTVCFIEFEDVNSASSVHHNLQG 283
+KQ+KV+ + E + +CF+EF D A + L+G
Sbjct: 230 YKQIKVIHKEPRRAGGEPYVLCFVEFTDAKCALTALSALKG 270
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMG-------FALFSTAQLAVAA 103
TIFI GLP D RE+ ++ R GY+ +V +K + G F F+ A+ A+ A
Sbjct: 205 TIFIEGLPADCSRREVAHIFRPFIGYKQIKVIHKEPRRAGGEPYVLCFVEFTDAKCALTA 264
Query: 104 KDALQEMIFDA---ETKSVLHTEMA 125
AL+ FD ++ S L ++A
Sbjct: 265 LSALKGYKFDEHEHDSSSSLKLQLA 289
>gi|380483560|emb|CCF40546.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 246
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 100/255 (39%), Gaps = 23/255 (9%)
Query: 49 VRTIFITGLPDDVKERELQN-LLRWLPGYE-----ASQVNYKGEKPMGFALFSTAQLAVA 102
+ T+++ L + VK L+ LL+ Y ++ N K K F +F+ + A
Sbjct: 7 IATVYVRNLEERVKVDLLKGALLQIFSEYGNVIEIVAKTNLKA-KGQAFVVFADPE---A 62
Query: 103 AKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAP 162
A+ A++E+ + + +A+ D ++ KR R Y A
Sbjct: 63 ARKAIEEVQGFELFEKPMQLALARTRSDATVKTAGDDEEFELHKRRRLAEKDKKKAYEAA 122
Query: 163 SPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPP 222
P GP G +A P G G+ A +P Y+P P
Sbjct: 123 EEQKRLKRP--GPSGAVAQDNRPVKAARGTGLKSTNPSTTAVIP--DEYLP--------P 170
Query: 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQ 282
LF+ NL E + + + +F GF++++++ R + F+E+E A + N
Sbjct: 171 NKILFVQNLPEDYDVDAVTSIFGRFEGFREVRLV-PGRRGIAFVEYEGEQGAITAKENTA 229
Query: 283 GAVIPSSGSVGMRIQ 297
G V+ S ++ + Q
Sbjct: 230 GMVLGDSHTIKVTYQ 244
>gi|345570654|gb|EGX53475.1| hypothetical protein AOL_s00006g341 [Arthrobotrys oligospora ATCC
24927]
Length = 255
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 221 PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHN 280
PP LF+ NL ++ + L G+F + GFK+++++ R + F+E+E+ A S N
Sbjct: 176 PPNKILFLQNLPDNATSDILNGIFGSFEGFKEVRLV-PGRKGIAFVEYENEAGAISAKEN 234
Query: 281 LQGAVIPSSGSVGMRIQY 298
QG + GS +++ Y
Sbjct: 235 TQGMSLGPDGSGIVKVTY 252
>gi|391337372|ref|XP_003743043.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
B''-like [Metaseiulus occidentalis]
Length = 212
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ L E N+ L+ LF PGFK+++++ R + F+E+ED +++
Sbjct: 133 DQPPNAILFLTGLPEETNDMMLQMLFGQFPGFKEVRLI-PGRPDIAFVEYEDEAQSTAAK 191
Query: 279 HNLQG 283
+ LQG
Sbjct: 192 NGLQG 196
>gi|82596021|ref|XP_726090.1| U1 small nuclear ribonucleoprotein a [Plasmodium yoelii yoelii
17XNL]
gi|23481350|gb|EAA17655.1| u1 small nuclear ribonucleoprotein a [Plasmodium yoelii yoelii]
Length = 508
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 10/114 (8%)
Query: 191 GYGVPPVQMPAPAPVPAPSSYVPVQNTKDNP--PCNTLFIGNLGESINEEELRGLFSAQP 248
Y +P + P A +++ P+QN NP P LF+ N+ E++N E +F A
Sbjct: 367 NYNIPNIH---PPQFYAMNNFAPIQN---NPVIPYKILFVENVDENVNTEAFNDIFKAFS 420
Query: 249 GFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQYPFCC 302
GF + +++ Q V F+++ D +SA+S + + + I + + C
Sbjct: 421 GFVEARIIPQ--RNVAFVDYTDESSATSAMKGTLFEICTNDKITFLHIIFIYLC 472
>gi|448114345|ref|XP_004202551.1| Piso0_001392 [Millerozyma farinosa CBS 7064]
gi|359383419|emb|CCE79335.1| Piso0_001392 [Millerozyma farinosa CBS 7064]
Length = 422
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 226 LFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERH---TVCFIEFEDVNSASSVHHNLQ 282
L++G L +S++E+ LR LFS+ G K +K L + + F+EFE+ +SA L
Sbjct: 74 LYVGGLHKSVSEDVLRDLFSSCGGVKSIKTLNDKNRPGFSYAFVEFENSDSADLALRTLN 133
Query: 283 GAVIPSS 289
G ++ +S
Sbjct: 134 GRMVNNS 140
>gi|170103054|ref|XP_001882742.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164642113|gb|EDR06370.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 243
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Query: 190 GGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPG 249
G +P V+ P V P Y+P P LF+ NL ES+ +E+L GLFS P
Sbjct: 146 GAAALPAVKRP---NVQMPDEYLP--------PNKILFLQNLPESVTKEQLLGLFSQYPN 194
Query: 250 FKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+++++ +R + F+E+ D SA L + G ++I Y
Sbjct: 195 LYEVRLIPTKRD-IAFVEYMDEGSAGVAKDALHNFKL--DGENKIKITY 240
>gi|242247219|ref|NP_001156146.1| U1 small nuclear ribonucleoprotein A-like [Acyrthosiphon pisum]
gi|239790514|dbj|BAH71814.1| ACYPI003668 [Acyrthosiphon pisum]
Length = 224
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 216 NTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSAS 275
N + PP LF+ NL + E L LF+ PGFK+++++ RH + F+EFE+ + ++
Sbjct: 142 NVPEQPPNQILFLTNLPDETTEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFENEHQSN 200
Query: 276 SVHHNLQGAVI 286
+ +L G I
Sbjct: 201 TAKLSLNGFKI 211
>gi|281205884|gb|EFA80073.1| hypothetical protein PPL_06895 [Polysphondylium pallidum PN500]
Length = 639
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 51/121 (42%), Gaps = 7/121 (5%)
Query: 11 QQWPPAPAPPPPPAAAAAAPPPPPPV---PYDNTNRIAHDEVRTIFITGLPDDVKERELQ 67
+ + + A PP P A P P P P N + D T+F + LP DV EREL
Sbjct: 514 RDFHGSMAAPPLPHHHGAYPDPTMPYFIPPRQNFD--MKDANTTLFFSNLPKDVTERELS 571
Query: 68 NLLRWLPGY-EASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFD-AETKSVLHTEMA 125
L R++ G+ V G+ P+ F F A A + L D +T S + E
Sbjct: 572 ILFRFMRGFLNVRLVQRDGKYPICFCDFRGVPSAAIAMEMLNGFKMDPKDTSSSISNEFD 631
Query: 126 K 126
+
Sbjct: 632 R 632
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 22/153 (14%)
Query: 132 KRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDPYGG 191
++ +D + +++ + + Y A FH A PH + A P P
Sbjct: 483 RKQKTSDFDRFEKDRGRYRDSHFERDSYPAKRDFHGSMAAPPLPHHHGAYPDPT------ 536
Query: 192 YGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFK 251
MP P P QN TLF NL + + E EL LF GF
Sbjct: 537 -------MPYFIP--------PRQNFDMKDANTTLFFSNLPKDVTERELSILFRFMRGFL 581
Query: 252 QMKVLRQE-RHTVCFIEFEDVNSASSVHHNLQG 283
+++++++ ++ +CF +F V SA+ L G
Sbjct: 582 NVRLVQRDGKYPICFCDFRGVPSAAIAMEMLNG 614
>gi|357621621|gb|EHJ73396.1| U1 small nuclear ribonucleoprotein A [Danaus plexippus]
Length = 220
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL + +E L LF+ PGFK+++++ RH + F+EF + +++
Sbjct: 141 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFANEMQSAAAK 199
Query: 279 HNLQGAVI 286
LQG I
Sbjct: 200 EALQGFKI 207
>gi|126133234|ref|XP_001383142.1| hypothetical protein PICST_55837 [Scheffersomyces stipitis CBS
6054]
gi|126094967|gb|ABN65113.1| polyadenylated RNA-binding protein, partial [Scheffersomyces
stipitis CBS 6054]
Length = 453
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 226 LFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERH---TVCFIEFEDVNSASSVHHNLQ 282
L++G L +S+ ++ L+ LFS G K +K+L + FIEF+ +A H L
Sbjct: 81 LYVGGLHKSVTDDMLKDLFSVAGGIKSVKILNDKNKPGFNYAFIEFDTNQAADMALHTLN 140
Query: 283 GAVIPSSGSVGMRIQYPF 300
G +I +S ++I + F
Sbjct: 141 GRIINNS---EIKINWAF 155
>gi|328865219|gb|EGG13605.1| hypothetical protein DFA_11366 [Dictyostelium fasciculatum]
Length = 620
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 191 GYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGF 250
G+G P P+ APV NPPC L++GN+ ++ E++LR +F
Sbjct: 185 GFGKPDRNEPS-APVDTT-----------NPPCKNLWVGNVAAAVTEDQLRDVFEQFGKV 232
Query: 251 KQMKVLRQERHTVCFIEFEDVNSASSVHHNLQG 283
+ +++L + F+ F ++ A + +NLQG
Sbjct: 233 ENVRILVGR--SCAFVNFTCIDHAMAAKNNLQG 263
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNL 281
P ++ GN EEE+RGLF K +K++ Q R + FI F D+N++ L
Sbjct: 115 PTKVIWAGNTHPDTTEEEVRGLFGPYGFVKTVKIVPQRRFS--FITFADINASVQAQQEL 172
Query: 282 QG 283
G
Sbjct: 173 NG 174
>gi|134084288|emb|CAK43175.1| unnamed protein product [Aspergillus niger]
Length = 255
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 107/276 (38%), Gaps = 27/276 (9%)
Query: 25 AAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYE-ASQVNY 83
A AP P PP + R VR + D +KE + + E ++ N
Sbjct: 2 ATITAPTPIPPNCTSQSLRTTPPSVRNLEERIKVDQLKEALEEIFSEYGTVLEIVAKTNL 61
Query: 84 KGEKPMGFALFSTAQLAVAAKDALQEM-IFDAETKSVLHTEMAKKNLFVKRGIVADTNAY 142
K K F +F T + A A D + +FD VL + ++ V R D
Sbjct: 62 KA-KGQAFVVFDTVEAATRAIDEINGFELFDKPM--VLDYAKTRSDMTVLREGGEDELEA 118
Query: 143 DQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAP 202
+ +RL + H A PP G P P G G+ P A
Sbjct: 119 HKRRRL---AEKAHEALEAQKKLKRPP-------GAPTEPGRPAKTAKGAGLKPTSGAAA 168
Query: 203 APVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHT 262
A +P Y+P P LF+ +L ++ +++ L +F GF++++++ R
Sbjct: 169 AVIP--DEYLP--------PNKILFLRDLPDTADQDSLTAVFGRFEGFQEVRLV-PGRKG 217
Query: 263 VCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+ F+E+E+ + A S G + +G +R+ Y
Sbjct: 218 IAFVEYENESGAISAKEATSGMPMGEAGK-PIRVTY 252
>gi|122919626|pdb|2B0G|A Chain A, Solution Structure Of Drosophila Melanogaster Snf Rbd2
gi|134103993|pdb|2AYM|A Chain A, Solution Structure Of Drosophila Melanogaster Snf Rbd2
Length = 83
Score = 44.3 bits (103), Expect = 0.066, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL E NE L LF+ PGFK+++++ RH + F+EF +++
Sbjct: 4 EQPPNQILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFTTELQSNAAK 62
Query: 279 HNLQG 283
LQG
Sbjct: 63 EALQG 67
>gi|355715885|gb|AES05434.1| RNA binding protein with multiple splicing 2 [Mustela putorius
furo]
Length = 155
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 75 GYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNL-FVKR 133
GYE S + +P+GF +F + A AAK+AL + FD E L E AK N K
Sbjct: 4 GYEGSLIKLTSRQPVGFVIFDSRAGAEAAKNALNGIRFDPENPQTLRLEFAKANTKMAKN 63
Query: 134 GIVADTN 140
++A N
Sbjct: 64 KLMATPN 70
>gi|76156594|gb|AAX27773.2| SJCHGC09182 protein [Schistosoma japonicum]
Length = 239
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 183 PPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNP-----PCNTLFIGNLGESINE 237
PP P G+P + P P P+ +P Q P P NT++I NL E I
Sbjct: 13 PPVAAPNLLVGIPHMAAPGALPSVTPAVVMP-QAVAHMPESIGQPNNTIYINNLNEKIKR 71
Query: 238 EEL-RGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQG 283
+EL + L++ F Q+ + R F+ F+D+NSAS+ ++QG
Sbjct: 72 DELKKSLYAVFVQFGQILDIITSRTLKMRGQAFVVFDDINSASTALRSMQG 122
>gi|226469924|emb|CAX70243.1| U1 small nuclear ribonucleoprotein A [Schistosoma japonicum]
gi|226488855|emb|CAX74777.1| U1 small nuclear ribonucleoprotein A [Schistosoma japonicum]
Length = 333
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 183 PPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNP-----PCNTLFIGNLGESINE 237
PP P G+P + P P P+ +P Q P P NT++I NL E I
Sbjct: 13 PPVAAPNLLVGIPHMAAPGALPSVTPAVVMP-QAVAHMPESIGQPNNTIYINNLNEKIKR 71
Query: 238 EEL-RGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQG 283
+EL + L++ F Q+ + R F+ F+D+NSAS+ ++QG
Sbjct: 72 DELKKSLYAVFVQFGQILDIITSRTLKMRGQAFVVFDDINSASTALRSMQG 122
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 208 PSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIE 267
P S V D PP LF+ NL + +E L LF G+++++++ RH + F+E
Sbjct: 243 PPSVVNPATIPDQPPNKILFLTNLPDDSDEAMLSMLFGQFTGYREVRMV-PGRHDIAFVE 301
Query: 268 FEDVNSASSVHHNLQG 283
F + AS+ LQG
Sbjct: 302 FGNEVEASAAKLGLQG 317
>gi|226488853|emb|CAX74776.1| U1 small nuclear ribonucleoprotein A [Schistosoma japonicum]
Length = 333
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 183 PPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNP-----PCNTLFIGNLGESINE 237
PP P G+P + P P P+ +P Q P P NT++I NL E I
Sbjct: 13 PPVAAPNLLVGIPHMAAPGALPSVTPAVVMP-QAVAHMPESIGQPNNTIYINNLNEKIKR 71
Query: 238 EEL-RGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQG 283
+EL + L++ F Q+ + R F+ F+D+NSAS+ ++QG
Sbjct: 72 DELKKSLYAVFVQFGQILDIITSRTLKMRGQAFVVFDDINSASTALRSMQG 122
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 187 DPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSA 246
D GGY PP P PA +P D PP LF+ NL + +E L LF
Sbjct: 230 DQTGGYPPPPPPPPPSVVNPAT---IP-----DQPPNKILFLTNLPDDSDEAMLSMLFGQ 281
Query: 247 QPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQG 283
G+++++++ RH + F+EF + AS+ LQG
Sbjct: 282 FTGYREVRMV-PGRHDIAFVEFGNEVEASAAKLGLQG 317
>gi|377835922|ref|XP_003688944.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Mus musculus]
Length = 309
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+NPP + LF+ NL E NE L LF+ GFK+ ++ R + F+EF++ A +
Sbjct: 205 ENPPNHILFLTNLPEETNELMLSMLFTQFRGFKEAGLV-PGRLDIAFVEFDNEVQAGAAL 263
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I + + M+I +
Sbjct: 264 DALQGFKITQNNA--MKISF 281
>gi|85109011|ref|XP_962704.1| hypothetical protein NCU08034 [Neurospora crassa OR74A]
gi|28924315|gb|EAA33468.1| hypothetical protein NCU08034 [Neurospora crassa OR74A]
gi|39979161|emb|CAE85534.1| related to small nuclear ribonucleoprotein snRNP U1A [Neurospora
crassa]
Length = 247
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 97/256 (37%), Gaps = 26/256 (10%)
Query: 49 VRTIFITGLPDDVKERELQNLLRWLPGYE------ASQVNYKGEKPMGFALFSTAQLAVA 102
+ T+++ L + VK L+ LR + ++ N K K F +F + A A
Sbjct: 9 IATVYVRNLEERVKPEPLKEALRTIFSEYGNVIDIVAKTNLKA-KGQAFVVFDKPESAQA 67
Query: 103 AKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAP 162
A D LQ + V ++ G + +DQ KR R
Sbjct: 68 AIDELQGFELFEKPMVVTLARTRSDATVIQTG---NEEEFDQHKRRRIAEKDKKRALEVA 124
Query: 163 SPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPP 222
+ P+ G AP P G G+ PA V P Y+P P
Sbjct: 125 EQQNRLKRPLQGA----APDARPAKNQRGAGLKATGQ-GPAAV-VPDEYLP--------P 170
Query: 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQ 282
LF+ NL + +++L +FS GF++++ + R + F+E++ A + N
Sbjct: 171 NRILFVQNLPDDFTKDDLTTIFSRFDGFREVRTV-PGRSGIAFVEYDAEAGAITAKENTA 229
Query: 283 GAVIPSSGSVGMRIQY 298
G + + + M++ Y
Sbjct: 230 GMALKNGEKI-MKVTY 244
>gi|224146679|ref|XP_002326095.1| predicted protein [Populus trichocarpa]
gi|222862970|gb|EEF00477.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 221 PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHN 280
PP N LFI NL L+ LF PGF++++++ + + + F+EFED +S
Sbjct: 156 PPNNILFIQNLPHETTSMMLQVLFQQYPGFREVRMI-EAKPGIAFVEFEDDVQSSMAMQA 214
Query: 281 LQGAVI 286
LQG I
Sbjct: 215 LQGFKI 220
>gi|339255862|ref|XP_003370674.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316965776|gb|EFV50450.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 220
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 209 SSYVPVQNTKDNPPCN-TLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIE 267
++YV V++ NPP N LF NL E E L+ LF+ PGFK+++++ RH + F+E
Sbjct: 137 TNYVSVES---NPPPNKILFCTNLPEEATEHMLQMLFNQFPGFKEVRLV-PNRHDIAFVE 192
Query: 268 FEDVNSASSVHHNLQG 283
F++ + + LQ
Sbjct: 193 FDNEYQSKTARDTLQN 208
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 18/90 (20%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSA---QPG-------FKQMKVLRQERHTVCFIEF 268
D PP T+++ NL E I ++EL+ A Q G K +K+ Q FI F
Sbjct: 3 DIPPNQTIYVNNLNEKIKKDELKRALHAVFHQFGTILDIVCLKTLKMRGQ-----AFIVF 57
Query: 269 EDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+D+NSA++ ++QG P MRIQY
Sbjct: 58 KDLNSATNALRSMQG--FPFYDK-PMRIQY 84
>gi|317037176|ref|XP_001398705.2| U1 small nuclear ribonucleoprotein usp102 [Aspergillus niger CBS
513.88]
Length = 251
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 102/256 (39%), Gaps = 30/256 (11%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEAS------QVNYKGEKPMGFALFSTAQLAVAAK 104
T+++ L + +K +L+ L + + + N K K F +F T + A A
Sbjct: 15 TVYVRNLEERIKVDQLKEALEEIFSEYGTVLEIVAKTNLKA-KGQAFVVFDTVEAATRAI 73
Query: 105 DALQEM-IFDAETKSVLHTEMAKKNLFVKR-GIVADTNAYDQSKRLRTGGDYTHTGYSAP 162
D + +FD VL + ++ V R G + A+ + + H A
Sbjct: 74 DEINGFELFDKPM--VLDYAKTRSDMTVLREGGEDELEAHKRRRLAEKERKQAHEALEAQ 131
Query: 163 SPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPP 222
PP G P P G G+ P A A +P Y+P P
Sbjct: 132 KKLKRPP-------GAPTEPGRPAKTAKGAGLKPTSGAAAAVIP--DEYLP--------P 174
Query: 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQ 282
LF+ +L ++ +++ L +F GF++++++ R + F+E+E+ + A S
Sbjct: 175 NKILFLRDLPDTADQDSLTAVFGRFEGFQEVRLV-PGRKGIAFVEYENESGAISAKEATS 233
Query: 283 GAVIPSSGSVGMRIQY 298
G + +G +R+ Y
Sbjct: 234 GMPMGEAGK-PIRVTY 248
>gi|241686638|ref|XP_002412835.1| hypothetical protein IscW_ISCW022580 [Ixodes scapularis]
gi|215506637|gb|EEC16131.1| hypothetical protein IscW_ISCW022580 [Ixodes scapularis]
Length = 152
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 199 MPAPAPVPAPSSYVPVQNTKDN---PPCNTLFIGNLGESINEEELRGLF 244
+P P V +P+ PV +T PPC+TLF+ NLG+ ++E+EL+ LF
Sbjct: 102 IPPPHLVASPALASPVGSTSSTAATPPCSTLFVANLGQFVSEQELKDLF 150
>gi|359358253|gb|AEV40671.1| SNF [Antheraea pernyi]
Length = 228
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL + +E L LF+ PGFK+++++ RH + F+EF + +++
Sbjct: 149 EQPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFGNEMQSAAAK 207
Query: 279 HNLQGAVI 286
LQG I
Sbjct: 208 EALQGFKI 215
>gi|145491995|ref|XP_001431996.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399103|emb|CAK64598.1| unnamed protein product [Paramecium tetraurelia]
Length = 124
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/108 (20%), Positives = 54/108 (50%), Gaps = 9/108 (8%)
Query: 200 PAPAPVPAPSSYVPVQNTKDNPP----CNTLFIGNLGESINEEELRGLFSAQPGFKQMKV 255
P P P+ + +++ + P ++L++ + E E+ +F PGF+++++
Sbjct: 5 PYPNPMFNNQYFELIRDNQQFQPQKESTHSLYVDGIPNDAQEREVAHIFRPYPGFQRVRL 64
Query: 256 LRQE-----RHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
++++ + +CF++F+D A+ V LQG + G++I +
Sbjct: 65 IKKQTQKGREYLLCFVDFDDALQATIVMQTLQGYRFDKNDKTGLKIYF 112
>gi|281209169|gb|EFA83344.1| hypothetical protein PPL_04137 [Polysphondylium pallidum PN500]
Length = 664
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 220 NPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVL--RQERHTVCFIEFEDVNSASSV 277
NPPC L+IGN+ S+ E+ LR LF + ++VL RQ F+ F+DV +A
Sbjct: 228 NPPCKNLWIGNVAMSVTEDSLRELFETVGKVEYVRVLTGRQ----CAFVSFQDVETAILA 283
Query: 278 HHNLQG 283
+QG
Sbjct: 284 KSAVQG 289
>gi|440355222|gb|AGC00413.1| SNF [Antheraea pernyi]
Length = 222
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+ PP LF+ NL + +E L LF+ PGFK+++++ RH + F+EF + +++
Sbjct: 143 EQPPNQILFLTNLPDGTSEMMLSMLFNQFPGFKEVRLV-PNRHDIAFVEFGNEMQSAAAK 201
Query: 279 HNLQGAVI 286
LQG I
Sbjct: 202 EALQGFKI 209
>gi|66806007|ref|XP_636725.1| U2 small nuclear ribonucleoprotein B [Dictyostelium discoideum AX4]
gi|74996697|sp|Q54J05.1|RU2B_DICDI RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|60465122|gb|EAL63221.1| U2 small nuclear ribonucleoprotein B [Dictyostelium discoideum AX4]
Length = 241
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 218 KDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSV 277
+D+PP TLF+ NL + + L LFS GFK++ ++ + + + FIEFED +
Sbjct: 161 RDDPPNKTLFVENLPDKCDSMMLSMLFSQFQGFKEVHMV-ESKKGIAFIEFEDEIKSGFA 219
Query: 278 HHNLQ 282
NLQ
Sbjct: 220 MTNLQ 224
>gi|428185283|gb|EKX54136.1| hypothetical protein GUITHDRAFT_100384 [Guillardia theta CCMP2712]
Length = 424
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEM 110
++F++G+P D + RE+ N+ R PG+ S ++ G+ + F F T A+ A +
Sbjct: 136 SLFLSGIPYDCRAREIYNMFRLFPGFRYSTLHRNGKILVAFVTFETPDQAINAGRQVNGT 195
Query: 111 IFDAETKSVLHTEMAKKNLFVKRGIVA 137
FD + L +A + + R A
Sbjct: 196 RFDPYVRLSLRVHVAHRTSTIPRDKAA 222
>gi|145499741|ref|XP_001435855.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402991|emb|CAK68458.1| unnamed protein product [Paramecium tetraurelia]
Length = 124
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 225 TLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQE-----RHTVCFIEFEDVNSASSVHH 279
+L++ + E E+ +F PGF+++++++++ + +CF++F+D A+ V
Sbjct: 34 SLYVDGIPNDAQEREVAHIFRPYPGFQRVRLIKKQTQKGREYLLCFVDFDDAFQATIVMQ 93
Query: 280 NLQGAVIPSSGSVGMRIQY 298
LQG + G++I +
Sbjct: 94 TLQGYRFDKNDKTGLKIYF 112
>gi|344250483|gb|EGW06587.1| U1 small nuclear ribonucleoprotein A [Cricetulus griseus]
Length = 104
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
+NPP + LF+ NL E N+ L LF+ PGFK++ L +H + F+EF++ A +
Sbjct: 25 ENPPNHILFLTNLPEETNKLMLSMLFNQCPGFKEVH-LVPGQHDIAFVEFDNEVQAGAAP 83
Query: 279 HNLQGAVIPSSGSVGMRIQY 298
LQG I + + M+I +
Sbjct: 84 DALQGFKITQNNA--MKISF 101
>gi|426200920|gb|EKV50843.1| hypothetical protein AGABI2DRAFT_189187 [Agaricus bisporus var.
bisporus H97]
Length = 292
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 97/238 (40%), Gaps = 38/238 (15%)
Query: 51 TIFITGLPDDVKERELQNLLRWL-PGY-EASQVNYKGEKPM---GFALFSTAQLAVAAKD 105
T++I L + VK + LQ LR L Y + V G M F F + A A
Sbjct: 68 TLYIQNLNEKVKPQVLQATLRGLFKSYGDVLDVVAHGNMRMRGQAFVSFDSVDSARKAMK 127
Query: 106 ALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAP--S 163
+Q ++ + + + + VK+ D +YDQ K+ R T Y+ P S
Sbjct: 128 DVQRFPLYSKPMQITFAK-TRSDAVVKK---LDAESYDQHKQ-RRDEHKKATRYTNPIKS 182
Query: 164 PFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPC 223
F MA + GG +P + PA V P Y+P P
Sbjct: 183 KFRLK---------RMAA-----EMDGGAALPQSKRPA---VQMPDEYLP--------PN 217
Query: 224 NTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNL 281
LF+ NL ES+ +++L LFS P +++++ ++ + F+E+ D SA L
Sbjct: 218 KILFLQNLPESVTKDQLMSLFSQYPNLYEVRMIPTKKD-IAFVEYVDEGSAGVAKDAL 274
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 11/101 (10%)
Query: 193 GVPPVQMPAPAPV------PAPSSYVPVQNTKDNPPCNTLFIGNLGESIN----EEELRG 242
G PP +P P+ PA PV + PC TL+I NL E + + LRG
Sbjct: 30 GQPPPAIPGQGPMDTTPTGPAVDGQTPVVVAVEENPCETLYIQNLNEKVKPQVLQATLRG 89
Query: 243 LFSAQPGFKQMKVLRQER-HTVCFIEFEDVNSASSVHHNLQ 282
LF + + R F+ F+ V+SA ++Q
Sbjct: 90 LFKSYGDVLDVVAHGNMRMRGQAFVSFDSVDSARKAMKDVQ 130
>gi|409084026|gb|EKM84383.1| hypothetical protein AGABI1DRAFT_110905 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 292
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 97/238 (40%), Gaps = 38/238 (15%)
Query: 51 TIFITGLPDDVKERELQNLLRWL-PGY-EASQVNYKGEKPM---GFALFSTAQLAVAAKD 105
T++I L + VK + LQ LR L Y + V G M F F + A A
Sbjct: 68 TLYIQNLNEKVKPQVLQATLRGLFKSYGDVLDVVAHGNMRMRGQAFVSFDSVDSARKAMK 127
Query: 106 ALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAP--S 163
+Q ++ + + + + VK+ D +YDQ K+ R T Y+ P S
Sbjct: 128 DVQRFPLYSKPMQITFAK-TRSDAVVKK---LDAESYDQHKQ-RRDEHKKATRYTNPIKS 182
Query: 164 PFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPC 223
F MA + GG +P + PA V P Y+P P
Sbjct: 183 KFRLK---------RMAA-----EMDGGAALPQSKRPA---VQMPDEYLP--------PN 217
Query: 224 NTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNL 281
LF+ NL ES+ +++L LFS P +++++ ++ + F+E+ D SA L
Sbjct: 218 KILFLQNLPESVTKDQLMSLFSQYPNLYEVRMIPTKKD-IAFVEYVDEGSAGVAKDAL 274
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 11/101 (10%)
Query: 193 GVPPVQMPAPAPV------PAPSSYVPVQNTKDNPPCNTLFIGNLGESIN----EEELRG 242
G PP +P P+ PA PV + PC TL+I NL E + + LRG
Sbjct: 30 GQPPPAIPGQGPMDTTPTAPAVDGQTPVVVAVEEKPCETLYIQNLNEKVKPQVLQATLRG 89
Query: 243 LFSAQPGFKQMKVLRQER-HTVCFIEFEDVNSASSVHHNLQ 282
LF + + R F+ F+ V+SA ++Q
Sbjct: 90 LFKSYGDVLDVVAHGNMRMRGQAFVSFDSVDSARKAMKDVQ 130
>gi|403223443|dbj|BAM41574.1| U1 snRNP protein [Theileria orientalis strain Shintoku]
Length = 418
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 225 TLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGA 284
TLF+ NL E++ ++ +F+ PGF + +V+ R V FI+F+ NS+S + LQG
Sbjct: 351 TLFVENLPENVTNLDVVNVFNKMPGFVEARVIIPRR--VAFIDFDSDNSSS---YALQGC 405
Query: 285 VIPS 288
PS
Sbjct: 406 TSPS 409
>gi|313219885|emb|CBY30800.1| unnamed protein product [Oikopleura dioica]
Length = 317
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 195 PPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMK 254
P +P P+ VPAP+ +P N N +F+ +L E ++E+ L LF+ F +++
Sbjct: 216 PGAAVPLPSAVPAPNMGLPEGKFGSN---NIIFVQDLPEEVDEKMLTALFNQFDNFMEVR 272
Query: 255 VLRQERHTVCFIEFEDVNSASSVHHNLQG 283
+ + FIE+ + SA++ LQG
Sbjct: 273 MAPSKTGRAAFIEYTNERSAANAKDTLQG 301
>gi|313232389|emb|CBY24056.1| unnamed protein product [Oikopleura dioica]
Length = 317
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 195 PPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMK 254
P +P P+ VPAP+ +P N N +F+ +L E ++E+ L LF+ F +++
Sbjct: 216 PGAAVPLPSAVPAPNMGLPEGKFGSN---NIIFVQDLPEEVDEKMLTALFNQFDNFMEVR 272
Query: 255 VLRQERHTVCFIEFEDVNSASSVHHNLQG 283
+ + FIE+ + SA++ LQG
Sbjct: 273 MAPSKTGRAAFIEYTNERSAANAKDTLQG 301
>gi|346977343|gb|EGY20795.1| U1 small nuclear ribonucleoprotein A [Verticillium dahliae VdLs.17]
Length = 246
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 206 PAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCF 265
PA SS VP + PP LFI NL E + E L +F GF++++++ R + F
Sbjct: 157 PAASSVVPDEYL---PPNKILFIQNLPEDFDIEALTDIFGRFDGFREVRLV-PGRRGIAF 212
Query: 266 IEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQ 297
+E++ A + N G V+ S ++ + Q
Sbjct: 213 VEYDGEQGAITAKENTAGMVLGESSTIKVTYQ 244
>gi|351707543|gb|EHB10462.1| U1 small nuclear ribonucleoprotein A [Heterocephalus glaber]
Length = 242
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 53/127 (41%), Gaps = 21/127 (16%)
Query: 178 YMAPP---PPPYDPYGGYGVPPVQMP---APAPVPAPSSYVPVQNTKDNPPCNTLFIGNL 231
YM PP PPP G+ P Q+P P+ P P Q DNPP + LF+
Sbjct: 99 YMLPPGMIPPP-------GLTPGQIPPGAMPSQQLMPGQMAPAQPLWDNPPNHILFLTKQ 151
Query: 232 GESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVN--------SASSVHHNLQG 283
E NE LF+ PGFK++ + + +I F + N +A S H G
Sbjct: 152 PEETNELMSSLLFNQFPGFKKVCLKPGRDNITLYITFVEFNNEVLSHTENAKSAHCRQAG 211
Query: 284 AVIPSSG 290
+P G
Sbjct: 212 LCMPYQG 218
>gi|392597766|gb|EIW87088.1| hypothetical protein CONPUDRAFT_79258 [Coniophora puteana
RWD-64-598 SS2]
Length = 655
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 41/104 (39%), Gaps = 4/104 (3%)
Query: 186 YDPYGGYGVPPVQMPAPAPVPAPSSY---VPVQNTKDNPPCNTLFIGNLGESINEEELRG 242
YD GGYG P Q + + + PC TLFI N+ N +++R
Sbjct: 124 YDDRGGYGTRPQQGKRNVRRERDDKVHDSIIEERIQRERPCRTLFIRNIKYETNSDDVRR 183
Query: 243 LFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVI 286
F K L R V F+ + D+ +A LQG+ I
Sbjct: 184 SFEEHGDIKTFFDLISTRGMV-FVTYFDLRAAERARDRLQGSEI 226
>gi|256083949|ref|XP_002578197.1| small nuclear ribonucleoprotein U)1aU)2b [Schistosoma mansoni]
gi|353232716|emb|CCD80071.1| putative small nuclear ribonucleoprotein U)1a,U)2b [Schistosoma
mansoni]
Length = 328
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D PP LF+ NL + +E L LF G+++++++ RH + F+EF + AS+
Sbjct: 249 DQPPNKILFLTNLPDDSDEAMLSMLFGQFTGYREVRMV-PGRHDIAFVEFGNEVEASAAK 307
Query: 279 HNLQG 283
LQG
Sbjct: 308 LGLQG 312
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 183 PPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTK----DNPPCNTLFIGNLGESINEE 238
PP P G+P + P P P+ +P T+ P NT++I N+ E I +
Sbjct: 13 PPVAAPNLLVGLPHMAAPGALPSVTPAVVMPQALTRMPESIGQPNNTIYINNMNEKIKCD 72
Query: 239 EL-RGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSVHHNLQG 283
EL + L + F Q+ + R F+ F+D++SAS+ ++QG
Sbjct: 73 ELKKSLCAVFDQFGQILDIITSRTLKMRGQAFVVFDDISSASTALRSMQG 122
>gi|390604986|gb|EIN14377.1| hypothetical protein PUNSTDRAFT_49189 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 631
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 58/151 (38%), Gaps = 4/151 (2%)
Query: 137 ADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPP 196
DTN + +GG Y Y S F+ PP P G + Y+ GYG P
Sbjct: 75 GDTNGAPSYEAYNSGGPYDGGAYHNGS-FNNPPPPYSG-DTFDQGGSQEYEDGAGYGGPY 132
Query: 197 VQMPA-PAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKV 255
Q P + + + PC TLFI N+ N E++R F K
Sbjct: 133 DQRRRRPERDDKVHDSIIEERIQRERPCRTLFIRNIKYETNPEDVRRKFEEHGDVKTFFD 192
Query: 256 LRQERHTVCFIEFEDVNSASSVHHNLQGAVI 286
L R V F+ + D+ +A LQG+ I
Sbjct: 193 LIGNRGMV-FVTYFDLRAAERARDRLQGSEI 222
>gi|350630544|gb|EHA18916.1| hypothetical protein ASPNIDRAFT_42727 [Aspergillus niger ATCC 1015]
Length = 249
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 89/222 (40%), Gaps = 24/222 (10%)
Query: 79 SQVNYKGEKPMGFALFSTAQLAVAAKDALQEM-IFDAETKSVLHTEMAKKNLFVKR-GIV 136
++ N K K F +F T + A A D + +FD VL + ++ V R G
Sbjct: 47 AKTNLKA-KGQAFVVFDTVEAATRAIDEINGFELFDKPM--VLDYAKTRSDMTVLREGGE 103
Query: 137 ADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPP 196
+ A+ + + H A PP G P P G G+ P
Sbjct: 104 DELEAHKRRRLAEKERKQAHEALEAQKKLKRPP-------GAPTEPGRPAKTAKGAGLKP 156
Query: 197 VQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVL 256
A A +P Y+P P LF+ +L ++ +++ L +F GF++++++
Sbjct: 157 TSGAAAAVIP--DEYLP--------PNKILFLRDLPDTADQDSLTAVFGRFEGFQEVRLV 206
Query: 257 RQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
R + F+E+E+ + A S G + +G +R+ Y
Sbjct: 207 -PGRKGIAFVEYENESGAISAKEATSGMPMGEAGK-PIRVTY 246
>gi|47230708|emb|CAF99901.1| unnamed protein product [Tetraodon nigroviridis]
Length = 573
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%)
Query: 75 GYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKN 128
GYE S + ++P+GF F + A AAK+AL + FD E L E AK N
Sbjct: 429 GYEGSLIKLTSKQPVGFVTFDSRSGAEAAKNALNGIRFDPENPQTLRLEFAKAN 482
>gi|296809910|ref|XP_002845293.1| small nuclear ribonucleoprotein U [Arthroderma otae CBS 113480]
gi|238842681|gb|EEQ32343.1| small nuclear ribonucleoprotein U [Arthroderma otae CBS 113480]
Length = 256
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 99/270 (36%), Gaps = 36/270 (13%)
Query: 24 AAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWLPGYEAS---- 79
AAAAA+ P PP P T+++ L + +K +L+ L + S
Sbjct: 2 AAAAASGSPIPPNP-------------TVYVRNLEERIKIEQLKEALTEIFSEYGSILEI 48
Query: 80 --QVNYKGEKPMGFALFSTAQLAVAAKDALQEM-IFDAETKSVLHTEMAKKNLFVKRGIV 136
+ N K K F +F A A D + +F E VL + + V R
Sbjct: 49 VAKTNLKA-KGQAFIVFDNVDSATRAIDEVNGFELF--EKPMVLEYAKTRSDATVMRE-- 103
Query: 137 ADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPP 196
+ KR R A P P P G G+ P
Sbjct: 104 GGDEELEAHKRRRLAEKERKQAQEALEAQKKLKRPAGAAGAAGGPDSRPAKTAKGAGLKP 163
Query: 197 VQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVL 256
+ A APV P Y+P P LF+ L E+ + + L +F PGFK+++++
Sbjct: 164 IG-AAAAPV-IPDEYLP--------PNKILFLRELPETYDADGLSAIFGRFPGFKEVRMV 213
Query: 257 RQERHTVCFIEFEDVNSASSVHHNLQGAVI 286
R + F+E+++ + A S G +
Sbjct: 214 -PGRKGIAFVEYDNESGAISAKEATSGMAL 242
>gi|71004576|ref|XP_756954.1| hypothetical protein UM00807.1 [Ustilago maydis 521]
gi|46095668|gb|EAK80901.1| hypothetical protein UM00807.1 [Ustilago maydis 521]
Length = 314
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 221 PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHN 280
PP LF+ N+ E + + EL LFSA PG+ ++ + + + F+EF D+ S+++
Sbjct: 211 PPNKMLFLQNIPEGVGKGELESLFSAYPGYVDVQTI-PGKAEIAFVEFADIPSSATARGA 269
Query: 281 LQG 283
L G
Sbjct: 270 LNG 272
>gi|345562139|gb|EGX45211.1| hypothetical protein AOL_s00173g312 [Arthrobotrys oligospora ATCC
24927]
Length = 425
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 216 NTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVC----FIEFEDV 271
N+ NPPC ++F+GNL + E+E+ FS K+++ + E C +++FE++
Sbjct: 214 NSGTNPPCRSIFVGNLRYEVTEQEIFRHFSPAGKIKKVRFMTFEDSGKCKGFSWVDFEEL 273
Query: 272 NSASSVHH-NLQGA 284
SA +V ++GA
Sbjct: 274 KSAENVFSGKIEGA 287
>gi|326495314|dbj|BAJ85753.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 385
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 60/147 (40%), Gaps = 20/147 (13%)
Query: 162 PSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSY---------- 211
P P APP P G PPP P+ Y PP+QM + P ++Y
Sbjct: 5 PQPGVAPPHPASGAPPQWGAIPPPMLPHQLYAPPPLQMWSQPLPPQQAAYGQAQPPPQTA 64
Query: 212 ------VPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----H 261
VP Q TL+IG+L ++E + F++ + +K++R ++
Sbjct: 65 YYGWPSVPTQAPAGPNEARTLWIGDLQYWMDENYVYNCFASTGEVQSVKLIRDKQTGQLQ 124
Query: 262 TVCFIEFEDVNSASSVHHNLQGAVIPS 288
FIEF A V GA++P+
Sbjct: 125 GYGFIEFTSRAGAERVLQTFNGAMMPN 151
>gi|326513618|dbj|BAJ87828.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 60/147 (40%), Gaps = 20/147 (13%)
Query: 162 PSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSY---------- 211
P P APP P G PPP P+ Y PP+QM + P ++Y
Sbjct: 5 PQPGVAPPHPASGAPPQWGAIPPPMLPHQLYAPPPLQMWSQPLPPQQAAYGQAQPPPQTA 64
Query: 212 ------VPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----H 261
VP Q TL+IG+L ++E + F++ + +K++R ++
Sbjct: 65 YYGWPSVPTQAPAGPNEARTLWIGDLQYWMDENYVYNCFASTGEVQSVKLIRDKQTGQLQ 124
Query: 262 TVCFIEFEDVNSASSVHHNLQGAVIPS 288
FIEF A V GA++P+
Sbjct: 125 GYGFIEFTSRAGAERVLQTFNGAMMPN 151
>gi|225435468|ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 447
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 208 PSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVC-FI 266
P +P N +N T+F+GNL ++ EEEL+ +FS F ++ ++ C F+
Sbjct: 240 PLQALPADNDINN---TTIFVGNLDPNVTEEELKQIFSQ---FGELVYVKIPAGRGCGFV 293
Query: 267 EFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+F SA +QG VI G + +RI +
Sbjct: 294 QFGTRTSAEEAIQRMQGTVI---GQLVVRISW 322
>gi|297746331|emb|CBI16387.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 208 PSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVC-FI 266
P +P N +N T+F+GNL ++ EEEL+ +FS F ++ ++ C F+
Sbjct: 240 PLQALPADNDINN---TTIFVGNLDPNVTEEELKQIFSQ---FGELVYVKIPAGRGCGFV 293
Query: 267 EFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+F SA +QG VI G + +RI +
Sbjct: 294 QFGTRTSAEEAIQRMQGTVI---GQLVVRISW 322
>gi|389742376|gb|EIM83563.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 274
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 107/286 (37%), Gaps = 44/286 (15%)
Query: 14 PPAPAPPPPPAAAAAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKERELQNLLRWL 73
PP P P PA A P P A T++I L + ++ L+N LR L
Sbjct: 23 PPQPGSAPAPALAPEQTPAGP----------AETVSETLYIQNLNEKIRIEVLKNSLRGL 72
Query: 74 ---PGYEASQVNYKGEKPMGFALFSTAQLAVAAKDALQEMI-FDAETKSV-LHTEMAKKN 128
G V + + G A S +AAK AL+E+ F +K + + + +
Sbjct: 73 FKSYGEVLDVVAHNNLRMRGQAFVSFESPEIAAK-ALKEVKGFPLYSKPMQISFARTRSD 131
Query: 129 LFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDP 188
VK+ D +DQ K R T Y+ P V P P P
Sbjct: 132 AVVKK---LDATNFDQHKEHRLQHK-KETRYTNPIKRKFREKRVASEMDGATSAPAPKRP 187
Query: 189 YGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQP 248
VQM P Y+ PP LF+ NL ES+ + +L LF+ P
Sbjct: 188 N-------VQM--------PDEYL--------PPNKILFLQNLPESVTKPQLEALFTQYP 224
Query: 249 GFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGM 294
+++++ ++ + F+E+ D SA+ L + + +
Sbjct: 225 NLHEVRLIPTKKD-IAFVEYVDEGSATVAKDALHNYKLDGENKIKI 269
>gi|356555656|ref|XP_003546146.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 411
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 196 PVQMPAPAPVPAPSSYVPV-QNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMK 254
P Q AP P+ APS+ P+ Q TL+IG+L ++E L F+ +K
Sbjct: 38 PPQHQAPQPMWAPSAQPPLPQQPASADEVRTLWIGDLQYWMDENYLYTCFAHTGEVSSVK 97
Query: 255 VLRQERHTVC----FIEFEDVNSASSVHHNLQGAVIPSSG 290
V+R ++ + FIEF A + GA++P+ G
Sbjct: 98 VIRNKQTSQSEGYGFIEFNSRAGAERILQTYNGAIMPNGG 137
>gi|359478387|ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 438
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 208 PSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVC-FI 266
P +P N +N T+F+GNL ++ EEEL+ +FS F ++ ++ C F+
Sbjct: 240 PLQALPADNDINN---TTIFVGNLDPNVTEEELKQIFSQ---FGELVYVKIPAGRGCGFV 293
Query: 267 EFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
+F SA +QG VI G + +RI +
Sbjct: 294 QFGTRTSAEEAIQRMQGTVI---GQLVVRISW 322
>gi|15226631|ref|NP_182280.1| spliceosomal protein U1A [Arabidopsis thaliana]
gi|75319458|sp|Q39244.1|RU1A_ARATH RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
protein A
gi|1050430|emb|CAA90283.1| U1snRNP-specific protein [Arabidopsis thaliana]
gi|2529669|gb|AAC62852.1| small nuclear ribonucleoprotein U1A [Arabidopsis thaliana]
gi|15450591|gb|AAK96567.1| At2g47580/T30B22.12 [Arabidopsis thaliana]
gi|16649011|gb|AAL24357.1| small nuclear ribonucleoprotein U1A [Arabidopsis thaliana]
gi|20259986|gb|AAM13340.1| small nuclear ribonucleoprotein U1A [Arabidopsis thaliana]
gi|22655484|gb|AAM98334.1| At2g47580/T30B22.12 [Arabidopsis thaliana]
gi|330255767|gb|AEC10861.1| spliceosomal protein U1A [Arabidopsis thaliana]
Length = 250
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 102/251 (40%), Gaps = 44/251 (17%)
Query: 50 RTIFITGLPDDVKERELQNLL--------RWLPGYEASQVNYKGEKPMGFALFSTAQLAV 101
+TI+I L + VK EL+ L + L +KG+ + F +A A+
Sbjct: 18 QTIYINNLNEKVKLDELKKSLNAVFSQFGKILEILAFKTFKHKGQAWVVFDNTESASTAI 77
Query: 102 AAKDAL----QEM-IFDAETKSVLHTEMAKKN-LFVKRGIVADTNAYDQSKRLRTGGDYT 155
A + +EM I A+TKS + +AK + FV R +++ + D
Sbjct: 78 AKMNNFPFYDKEMRIQYAKTKSDV---VAKADGTFVPR---EKRKRHEEKGGGKKKKDQH 131
Query: 156 HTGYSAPSPFHAPPAPVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQ 215
H P ++ V+G A PP PY G G+ P APAP
Sbjct: 132 HDSTQMGMPMNSAYPGVYG-----AAPPLSQVPYPG-GMKPNMPEAPAP----------- 174
Query: 216 NTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSAS 275
P N LF+ NL L+ LF GFK+++++ + + + F+EF D ++
Sbjct: 175 ------PNNILFVQNLPHETTPMVLQMLFCQYQGFKEVRMI-EAKPGIAFVEFADEMQST 227
Query: 276 SVHHNLQGAVI 286
LQG I
Sbjct: 228 VAMQGLQGFKI 238
>gi|427791071|gb|JAA60987.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 127
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 21/24 (87%)
Query: 221 PPCNTLFIGNLGESINEEELRGLF 244
PPC+TLF+ NLG+ ++E+EL+ LF
Sbjct: 103 PPCSTLFVANLGQFVSEQELKDLF 126
>gi|218200015|gb|EEC82442.1| hypothetical protein OsI_26865 [Oryza sativa Indica Group]
Length = 427
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 36/68 (52%)
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVH 278
D C ++++GN+ + E LR +F + + K++R+E+ + F+++ D SA+
Sbjct: 60 DTSTCRSVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKSSYGFVDYYDRRSAALAI 119
Query: 279 HNLQGAVI 286
L G I
Sbjct: 120 LTLNGKQI 127
>gi|297844004|ref|XP_002889883.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
gi|297335725|gb|EFH66142.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 56/131 (42%), Gaps = 16/131 (12%)
Query: 164 PFHAPPAPVWGPHGYMAPPPPPYDPYGGYGV--PPVQMPAPAPVPAPSSYVPVQNTKDNP 221
P HAPP +GY P PYG G PP QM P AP S P+ T D
Sbjct: 12 PHHAPPPSAQQQYGYQQP-----SPYGIAGAAPPPPQMWNPQ-AAAPPSAQPM--TVDE- 62
Query: 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFIEFEDVNSASSV 277
TL+IG+L ++E L G F+ KV+R ++ FIEF +A V
Sbjct: 63 -IRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERV 121
Query: 278 HHNLQGAVIPS 288
A IPS
Sbjct: 122 LQTFNNAPIPS 132
>gi|223996717|ref|XP_002288032.1| ribonuceoprotein [Thalassiosira pseudonana CCMP1335]
gi|220977148|gb|EED95475.1| ribonuceoprotein [Thalassiosira pseudonana CCMP1335]
Length = 356
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 110/296 (37%), Gaps = 41/296 (13%)
Query: 27 AAAPPPPPPVPYDNTNRIAHDEVRTIFITGLPDDVKE---RELQNLLRWLPG-YEASQVN 82
A P + + R DE+ +F+ LP + E REL + G Y + N
Sbjct: 76 AQVRPAQGEIEEGDDERDEGDEMAKLFVGQLPREADEDFVRELFTSYGDITGIYIIKKRN 135
Query: 83 YKGEKPMGFALFSTAQLAVAAKDALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAY 142
+ + F F +A AA DAL D E +H E K + VK AD N
Sbjct: 136 NEAKNGCAFVKFRERDMAQAAIDAL-----DGE----VHLEGVDKPIRVK---FADQNKG 183
Query: 143 DQSKRLRTGGDYTHTGYSAPSPFH-------------APPAPVWGPHGYMAPPPPPYDPY 189
R +GG H G+ H AP + P G M+P P D Y
Sbjct: 184 QYHHRSMSGGGSRHPGHGVIPQAHDIYMNHRGHVVGAAPGYYMGHPPGSMSPVYPSPDEY 243
Query: 190 GGY---GVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSA 246
+ G PP M P P P VP + ++ P LFI +L + + +L F+
Sbjct: 244 SQHAHDGTPPAAMMTPGVHP-PPLMVPAR-PREGPAGANLFIYHLPIDLTDADLATAFNP 301
Query: 247 QPGFKQMKVLRQ----ERHTVCFIEFEDVNSASSVHHNLQGAVIPSSGSVGMRIQY 298
KV E F+ ++ V +A + G I G+ +++Q+
Sbjct: 302 FGHVISAKVYVDRYTGESKGFGFVSYDSVMAAELAIEQMNGFQI---GNKRLKVQH 354
>gi|388497184|gb|AFK36658.1| unknown [Medicago truncatula]
Length = 232
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 190 GGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPG 249
G YG P A + +P P + PP N LFI NL L+ LF PG
Sbjct: 128 GAYGATP----ALSQIPYPGGAKSLLPEAPAPPNNILFIQNLPNETTPMMLQMLFLQYPG 183
Query: 250 FKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVI 286
FK+++++ + + + F+E+ D ++ LQG I
Sbjct: 184 FKEVRMV-EAKPGIAFVEYGDEMQSTMAMQALQGFKI 219
>gi|190346145|gb|EDK38159.2| hypothetical protein PGUG_02257 [Meyerozyma guilliermondii ATCC
6260]
Length = 681
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 60/140 (42%), Gaps = 19/140 (13%)
Query: 158 GYSAPSPFHAPPAPVWGPHGYM-APPPPPYDPYGG------YGVPPVQMPAPAPVPAPSS 210
G+ PF AP + P+GY AP P Y GG YG P P P P
Sbjct: 257 GFQNMYPFWGGGAPYY-PYGYAGAPGSPDYGNMGGLNEEDDYGGAPPPPPPPPPPGQIPY 315
Query: 211 YVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFI 266
PVQ D P T+F+G L +NE+ L L FKQ +++Q + F+
Sbjct: 316 PPPVQQYTD-PNNTTVFVGGLSSDVNEQTLFTL------FKQFGIIQQIKIPPGKNCGFV 368
Query: 267 EFEDVNSASSVHHNLQGAVI 286
++ + A ++QG +I
Sbjct: 369 KYTNREDAEEAIASMQGFII 388
>gi|405960114|gb|EKC26061.1| Ankyrin repeat and SOCS box protein 8 [Crassostrea gigas]
Length = 1029
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 56/247 (22%), Positives = 103/247 (41%), Gaps = 14/247 (5%)
Query: 48 EVRTIFITGLPDDVKERELQN-LLRWLPGYEASQVN--YKGEKPMGFALFSTAQLAVAAK 104
E R++ ++G+ + + +++ L R + VN Y GE + + F + A AK
Sbjct: 78 EYRSLCLSGISSKIPDHAVKDALYREFKKFGEFNVNITYTGEMRVAYINFRYPEDAREAK 137
Query: 105 DALQEMIFDAETKSVLHTEMAKKNLFVKRGIVADTNAYDQSKRLRTGGDYTHTGYSAPSP 164
A + E V+ + KK+ G ++ T++Y +S +Y S S
Sbjct: 138 HAKHNKLVLFERLVVIESVYPKKHHGAPSGAMS-TSSYARSNEFL---NYPGGSSSRRSS 193
Query: 165 FHAPPAPVWGPHGYMAPPPPPYDPYG-GYGVPPVQMPAP-APVPAPSSYVPVQNTKDNPP 222
P + P +G GY P AP P ++P + +D+
Sbjct: 194 PPFQPRRSYPSMRSPEVDVPQRKDFGSGYISPTSVRRAPNEKFPYHLDHIPPE--EDDKA 251
Query: 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER---HTVCFIEFEDVNSASSVHH 279
TLF+GNL +I +EEL+ +F +++ + R +R + FI+F +++ A
Sbjct: 252 TRTLFVGNLDYNITDEELKDVFEKYGFLEEIDIKRPQRGQGNAYAFIKFMNLDYAHRAKV 311
Query: 280 NLQGAVI 286
+ G I
Sbjct: 312 EMSGQYI 318
>gi|255075217|ref|XP_002501283.1| predicted protein [Micromonas sp. RCC299]
gi|226516547|gb|ACO62541.1| predicted protein [Micromonas sp. RCC299]
Length = 323
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 51 TIFITGLPDDVKERELQNLLRWLPGYEASQV--NYKGEK-PMGFALFSTAQLAVAAKDAL 107
T+ I+G+P D RE+ ++ R G++++++ + E+ P+ FA F+ +LA A + L
Sbjct: 233 TLHISGVPKDATVREICHIFRPFDGFQSARLVPSKDPERGPLCFAEFTNPELAFVALETL 292
Query: 108 QEMIFDAE--TKSVLHTEMAKK 127
+ + D + S LH AK
Sbjct: 293 EGYLIDRDDPDSSALHIAFAKN 314
>gi|346977902|gb|EGY21354.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
dahliae VdLs.17]
Length = 418
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 5/132 (3%)
Query: 160 SAPSPFHAPPAPVWGPHGYMAPPPP-PYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTK 218
S +P + P G+ PP P+ P YGVPP AP N
Sbjct: 219 STATPKNRNHGPYGAQQGHQMPPAMHPHQPQAFYGVPPGPQFNQGYGAAPQFQQQQMNQF 278
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVC-FIEFEDVNSASSV 277
+P T+F+G L + E+ELR F GF ++ ++ C F++F ++A
Sbjct: 279 TDPNNTTVFVGGLSGYVTEDELRSFFQ---GFGEITYVKIPPGKGCGFVQFVHRHAAEMA 335
Query: 278 HHNLQGAVIPSS 289
+ +QG I +S
Sbjct: 336 INQMQGYPIGNS 347
>gi|440796521|gb|ELR17630.1| RNA recognition domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 264
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 226 LFIGNLGESINEEELRGLFSAQPGFKQMKVLRQ----ERHTVCFIEFEDVNSASSVHHNL 281
+F+G++G +N+E L+ F+ P F++ KV+R + F+ F D +
Sbjct: 152 IFVGDIGNEVNDEILKSAFAKYPSFQRSKVVRDPKSLKTKGYGFVSFSDARDYVKALREM 211
Query: 282 QGAVI 286
G I
Sbjct: 212 NGKYI 216
>gi|330812809|ref|XP_003291310.1| hypothetical protein DICPUDRAFT_38760 [Dictyostelium purpureum]
gi|325078525|gb|EGC32172.1| hypothetical protein DICPUDRAFT_38760 [Dictyostelium purpureum]
Length = 587
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 222 PCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNL 281
P ++ GN+ +E+E+RGLFS + +K++ ++ FI F DVN+A + +NL
Sbjct: 115 PTKIVWAGNVHPDSSEDEIRGLFSQFGYIQAIKIIPAKQ--CAFITFGDVNAAIAAQYNL 172
Query: 282 QGAVI 286
G I
Sbjct: 173 NGTPI 177
>gi|302420775|ref|XP_003008218.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
gi|261353869|gb|EEY16297.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
Length = 430
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 5/132 (3%)
Query: 160 SAPSPFHAPPAPVWGPHGYMAPPPP-PYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTK 218
S +P + P G+ PP P+ P YGVPP AP N
Sbjct: 219 STATPKNRNHGPYGAQQGHQMPPAMHPHQPQAFYGVPPGPQFNQGYGAAPQFQQQQMNQF 278
Query: 219 DNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVC-FIEFEDVNSASSV 277
+P T+F+G L + E+ELR F GF ++ ++ C F++F ++A
Sbjct: 279 TDPNNTTVFVGGLSGYVTEDELRSFFQ---GFGEITYVKIPPGKGCGFVQFVHRHAAEMA 335
Query: 278 HHNLQGAVIPSS 289
+ +QG I +S
Sbjct: 336 INQMQGYPIGNS 347
>gi|146421272|ref|XP_001486586.1| hypothetical protein PGUG_02257 [Meyerozyma guilliermondii ATCC
6260]
Length = 681
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 60/140 (42%), Gaps = 19/140 (13%)
Query: 158 GYSAPSPFHAPPAPVWGPHGYM-APPPPPYDPYGG------YGVPPVQMPAPAPVPAPSS 210
G+ PF AP + P+GY AP P Y GG YG P P P P
Sbjct: 257 GFQNMYPFWGGGAPYY-PYGYAGAPGLPDYGNMGGLNEEDDYGGAPPPPPPPPPPGQIPY 315
Query: 211 YVPVQNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQER----HTVCFI 266
PVQ D P T+F+G L +NE+ L L FKQ +++Q + F+
Sbjct: 316 PPPVQQYTD-PNNTTVFVGGLSSDVNEQTLFTL------FKQFGIIQQIKIPPGKNCGFV 368
Query: 267 EFEDVNSASSVHHNLQGAVI 286
++ + A ++QG +I
Sbjct: 369 KYTNREDAEEAIASMQGFII 388
>gi|242218778|ref|XP_002475176.1| predicted protein [Postia placenta Mad-698-R]
gi|220725670|gb|EED79648.1| predicted protein [Postia placenta Mad-698-R]
Length = 574
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 205 VPAPSSYVPVQNTKDNPPCNTLFIGNLGESINEEELRGL----FSAQPGFKQMKVLRQER 260
+ + ++ +P ++ P ++F+G+L I + EL L S K +KV+R +
Sbjct: 59 IASHTNTIPPTQSEKMPHDASIFVGSLPTHIEQPELTSLLHEHLSQHAEVKSIKVVRDSK 118
Query: 261 HTVC-FIEFEDVNSASSVHHNLQ 282
+C F++ ED ++A+ + H LQ
Sbjct: 119 GGICAFVQCEDSSTAARLIHTLQ 141
>gi|321456772|gb|EFX67872.1| hypothetical protein DAPPUDRAFT_330660 [Daphnia pulex]
Length = 739
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 223 CNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLR---QERHTVCFIEFEDVNSASSVHH 279
TLF GNL +I EEELR +F + + + R + F+ FE+++ A+
Sbjct: 291 TRTLFAGNLEINITEEELRRIFGNYGIVEDVDIKRPPPGTGNAYAFVRFENLDQANRCKV 350
Query: 280 NLQGAVIPSSGSVGMRIQY 298
L G I G ++I Y
Sbjct: 351 ELSGQYI---GKFQVKIGY 366
>gi|320591314|gb|EFX03753.1| U1 small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 236
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 221 PPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHN 280
PP TLF+ NL E + + L G+F GF++++++ R + F+E++ A + N
Sbjct: 158 PPNKTLFVQNLPEDCDADVLTGIFGRYEGFREVRLVPGRR--LAFVEYDAEPGAITAKEN 215
Query: 281 LQGAVIPSSGSVGMRIQY 298
G ++ + +++ Y
Sbjct: 216 TAGMLVGEADKRPIKVTY 233
>gi|171695760|ref|XP_001912804.1| hypothetical protein [Podospora anserina S mat+]
gi|170948122|emb|CAP60286.1| unnamed protein product [Podospora anserina S mat+]
Length = 390
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 7/113 (6%)
Query: 178 YMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGESINE 237
YM PP P GVPP PA AP + + N +P T+F+G L + E
Sbjct: 217 YMMPPVPGAQAPMWGGVPPYGYAQPA---APFNPMQPMNQFTDPNNTTVFVGGLSGYVTE 273
Query: 238 EELRGLFSAQPGFKQMKVLRQERHTVC-FIEFEDVNSASSVHHNLQGAVIPSS 289
+ELR F GF ++ ++ C F++F ++A + +QG I +S
Sbjct: 274 DELRSFFQ---GFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNS 323
>gi|449446975|ref|XP_004141245.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449498692|ref|XP_004160607.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 426
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 13/119 (10%)
Query: 175 PHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGES 234
P YMAPP PP + + +P P S T+++G+L
Sbjct: 44 PQHYMAPPLPPPYMHYHHQYHHHHLPIQPSQPLKGS---------GSENKTIWVGDLHHW 94
Query: 235 INEEELRGLFSAQPGFKQMKVLRQERHTVC----FIEFEDVNSASSVHHNLQGAVIPSS 289
++E L FS+ MKV+R ++ + F+EF +A V N G +PS+
Sbjct: 95 MDESYLHSCFSSVGEISSMKVIRNKQTGLSEGYGFVEFLSHTTAEKVLQNYSGMFMPST 153
>gi|358341840|dbj|GAA30463.2| putative RNA-binding protein 15B [Clonorchis sinensis]
Length = 783
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 4/99 (4%)
Query: 194 VPPVQMPAPAPVPAPSSYVPVQN-TKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQ 252
+P + P P P + ++ TLF+G+L I E E+ F +Q
Sbjct: 248 LPTISHNRHTPTTGPRGLSPGSDPDEELKATRTLFVGSLESDITETEVLQTFERFGNIEQ 307
Query: 253 MKVLRQER---HTVCFIEFEDVNSASSVHHNLQGAVIPS 288
+ V R + H+ F+ FEDV+ A + G + S
Sbjct: 308 IDVKRAAKPGAHSYAFVRFEDVDMACRARALINGRRVRS 346
>gi|449470045|ref|XP_004152729.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449496017|ref|XP_004160013.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 429
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 13/123 (10%)
Query: 171 PVWGPHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGN 230
P+ P Y+ PP P Y PY Y PP Q+ +T +N T+++G+
Sbjct: 48 PMMPPQHYVPPPSPHYIPYRQY-PPPHQLNGQQHQQPHQG-----STSEN---KTIWVGD 98
Query: 231 LGESINEEELRGLFSAQPGFKQMKVLRQERHTVC----FIEFEDVNSASSVHHNLQGAVI 286
L ++E L F++ +KV+R ++ + F+EF +A V N ++
Sbjct: 99 LQHWMDENYLHSCFASTGEISSLKVIRNKQTGISEGYGFVEFFSHTTAEKVLQNYSSILM 158
Query: 287 PSS 289
P++
Sbjct: 159 PNT 161
>gi|297824861|ref|XP_002880313.1| hypothetical protein ARALYDRAFT_483938 [Arabidopsis lyrata subsp.
lyrata]
gi|297326152|gb|EFH56572.1| hypothetical protein ARALYDRAFT_483938 [Arabidopsis lyrata subsp.
lyrata]
Length = 249
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 19/112 (16%)
Query: 175 PHGYMAPPPPPYDPYGGYGVPPVQMPAPAPVPAPSSYVPVQNTKDNPPCNTLFIGNLGES 234
P Y A PP PY G GV P APAP P N LF+ NL
Sbjct: 145 PGVYGAAPPLSQVPYPG-GVKPNLPEAPAP-----------------PNNILFVQNLPHE 186
Query: 235 INEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSASSVHHNLQGAVI 286
L+ LF GFK+++++ + + + F+EF D ++ LQG I
Sbjct: 187 TTPMVLQMLFYQYQGFKEVRMV-EAKPGIAFVEFADEMQSTVAMQGLQGFKI 237
>gi|393246971|gb|EJD54479.1| hypothetical protein AURDEDRAFT_141332 [Auricularia delicata
TFB-10046 SS5]
Length = 601
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Query: 215 QNTKDNPPCNTLFIGNLGESINEEELRGLFSAQPGFKQMKVLRQERHTVCFIEFEDVNSA 274
Q + PC TLFI N+ + +R F K L R V F+ + D+ +A
Sbjct: 133 QRIQRERPCRTLFIRNIKYETDSNHVRARFEEFGEIKSFYDLISSRGMV-FVTYYDLRAA 191
Query: 275 SSVHHNLQGAVI 286
LQGA +
Sbjct: 192 ERTRERLQGAEL 203
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,981,814,843
Number of Sequences: 23463169
Number of extensions: 314253092
Number of successful extensions: 5301964
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6655
Number of HSP's successfully gapped in prelim test: 8623
Number of HSP's that attempted gapping in prelim test: 4569004
Number of HSP's gapped (non-prelim): 622756
length of query: 306
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 164
effective length of database: 9,027,425,369
effective search space: 1480497760516
effective search space used: 1480497760516
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 76 (33.9 bits)