Your job contains 1 sequence.
>021860
MAVEATSSFLSCSSKTHFLFNLRASSSPSSWKKFTQSANFAAKNRHVCRNERPNVSCSAA
AFAVQETLEKTRESVMASSAKEMMPKIDKSGRFCSPRAARELALLVVYAACLEGSDPIRL
FEKRLNSRREPGYEFDKSSLLEYNHMSFGGPPVTTETVEEADELLRSDEEESAIEAEVLS
APPKLVYSKLLLRFTRKLLVAVVDKWDAHVHIIDKVVPPIWKVWKMDQPAGRILELSILH
LAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVRNLEGTANIEASKASK
EVPSEV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021860
(306 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2131428 - symbol:AT4G26370 species:3702 "Arabi... 876 1.1e-87 1
TIGR_CMR|BA_4406 - symbol:BA_4406 "N utilization substanc... 111 5.9e-06 1
UNIPROTKB|P65582 - symbol:nusB "N utilization substance p... 110 7.6e-06 1
TIGR_CMR|GSU_1692 - symbol:GSU_1692 "N utilization substa... 92 0.00023 2
TIGR_CMR|DET_1278 - symbol:DET_1278 "N utilization substa... 96 0.00023 2
>TAIR|locus:2131428 [details] [associations]
symbol:AT4G26370 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009073 "aromatic amino acid
family biosynthetic process" evidence=RCA] [GO:0010103 "stomatal
complex morphogenesis" evidence=RCA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR006027
Pfam:PF01029 GO:GO:0009507 EMBL:CP002687 GO:GO:0006355
GO:GO:0003723 Gene3D:1.10.940.10 SUPFAM:SSF48013 EMBL:AY054564
EMBL:BT008707 IPI:IPI00535428 RefSeq:NP_567745.1 UniGene:At.2177
ProteinModelPortal:Q93XY7 SMR:Q93XY7 STRING:Q93XY7 PRIDE:Q93XY7
EnsemblPlants:AT4G26370.1 GeneID:828743 KEGG:ath:AT4G26370
TAIR:At4g26370 HOGENOM:HOG000240288 InParanoid:Q93XY7 OMA:PPKLVYS
PhylomeDB:Q93XY7 ProtClustDB:CLSN2689621 Genevestigator:Q93XY7
Uniprot:Q93XY7
Length = 301
Score = 876 (313.4 bits), Expect = 1.1e-87, P = 1.1e-87
Identities = 186/304 (61%), Positives = 221/304 (72%)
Query: 3 VEATSSFLSCSSKTHFLFNLRASSSPSSWKK--FTQSANFAAKNRHVCRNERPNVSCSAA 60
+E T S L S ++ + ++ SP S + FT + N R S S+
Sbjct: 1 MEGTFSPLCLRSSSNLCY-FSSNVSPDSHRSIGFTLVDSLRPTNLVSLRTGNKRSSSSSL 59
Query: 61 AFAVQETLEKTRE-SVMASSAKEM-MPKIDKSGRFCSPRAARELALLVVYAACLEGSDPI 118
+ T R ++ A K++ MPKIDKSGR SPRAARELAL+++YAACLEGSDPI
Sbjct: 60 RLFLSPTRSALRTPTISAEEVKDVPMPKIDKSGRLSSPRAARELALVILYAACLEGSDPI 119
Query: 119 RLFEKRLNSRREPGYEFDKSSLLEYNHMSFGGPPVTTETVEEADELLRSDEEESAIEAEV 178
RLFEKR+N+RREPGYEFDKSSLLEYNHMSFGGPPV TET EE DEL+R DE+ES IEAEV
Sbjct: 120 RLFEKRINARREPGYEFDKSSLLEYNHMSFGGPPVKTETKEEEDELVRHDEKESKIEAEV 179
Query: 179 LSAPPKLVYSKLLLRFTRKLLVAVVDKWDAHVHIIDKVVPPIWKVWKMDQPAGRILELSI 238
LSAPPKLVYSKL+LRF +KLL AVVDKWD+HV II+K+ PP WK PAGRILE SI
Sbjct: 180 LSAPPKLVYSKLVLRFAKKLLAAVVDKWDSHVVIIEKISPPDWK----SAPAGRILEFSI 235
Query: 239 LHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVRNLEGTANIEASKA 298
LHLAMSE+ V+ TRH IVINEAVDLAKRFCDG+APRIINGCLRTFV++ T+ +A +
Sbjct: 236 LHLAMSEVAVLETRHPIVINEAVDLAKRFCDGSAPRIINGCLRTFVKDRATTSTPQALEL 295
Query: 299 SKEV 302
+EV
Sbjct: 296 KQEV 299
>TIGR_CMR|BA_4406 [details] [associations]
symbol:BA_4406 "N utilization substance protein B"
species:198094 "Bacillus anthracis str. Ames" [GO:0006353
"DNA-dependent transcription, termination" evidence=ISS]
HAMAP:MF_00073 InterPro:IPR006027 InterPro:IPR011605 Pfam:PF01029
GO:GO:0006355 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 GO:GO:0006353
RefSeq:NP_846634.1 RefSeq:YP_021049.1 RefSeq:YP_030336.1
ProteinModelPortal:Q81M49 DNASU:1087738
EnsemblBacteria:EBBACT00000010462 EnsemblBacteria:EBBACT00000015293
EnsemblBacteria:EBBACT00000022074 GeneID:1087738 GeneID:2816677
GeneID:2851749 KEGG:ban:BA_4406 KEGG:bar:GBAA_4406 KEGG:bat:BAS4086
eggNOG:COG0781 HOGENOM:HOG000281867 KO:K03625 OMA:TEYVEIA
ProtClustDB:PRK00202 BioCyc:BANT260799:GJAJ-4143-MONOMER
BioCyc:BANT261594:GJ7F-4286-MONOMER Gene3D:1.10.940.10
PANTHER:PTHR11078 SUPFAM:SSF48013 TIGRFAMs:TIGR01951 Uniprot:Q81M49
Length = 130
Score = 111 (44.1 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 28/87 (32%), Positives = 51/87 (58%)
Query: 195 TRKLLVAVVDKWDAHVHIIDKVVPPIWKVWKMDQPAGRILELSILHLAMSEITVVGT-RH 253
T + L ++V + + +ID+ + K WK+++ + I++ SIL +A+ E+ + H
Sbjct: 39 TNEFLESLVVGFVENKEVIDEAIRQNLKKWKLERIS--IVDRSILRVAVYEMKYMEEIPH 96
Query: 254 QIVINEAVDLAKRFCDGAAPRIINGCL 280
+ INEA+++AK F D + R ING L
Sbjct: 97 NVTINEAIEIAKTFGDEESRRFINGVL 123
>UNIPROTKB|P65582 [details] [associations]
symbol:nusB "N utilization substance protein B homolog"
species:170187 "Streptococcus pneumoniae TIGR4" [GO:0005515
"protein binding" evidence=IPI] HAMAP:MF_00073 InterPro:IPR006027
InterPro:IPR011605 Pfam:PF01029 GO:GO:0006355 GO:GO:0003723
EMBL:AE005672 GenomeReviews:AE005672_GR GO:GO:0006353
eggNOG:COG0781 HOGENOM:HOG000281867 KO:K03625 ProtClustDB:PRK00202
Gene3D:1.10.940.10 PANTHER:PTHR11078 SUPFAM:SSF48013
TIGRFAMs:TIGR01951 PIR:B95050 RefSeq:NP_344955.1
ProteinModelPortal:P65582 EnsemblBacteria:EBSTRT00000026414
GeneID:930369 KEGG:spn:SP_0433 PATRIC:19705211 OMA:TGVKDHE
Uniprot:P65582
Length = 140
Score = 110 (43.8 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 199 LVAVVDKWDAHVHIIDKVVPPIWKV-WKMDQPAGRILELSILHLAMSEITVVGTRHQIVI 257
L+ +V A +DK + K W +++ ++E ++L L + EIT T + +
Sbjct: 52 LIDLVSGVQAKKEELDKQITQHLKAGWTIERLT--LVERNLLRLGVFEITSFDTPQLVAV 109
Query: 258 NEAVDLAKRFCDGAAPRIINGCLRTFV 284
NEA++LAK F D + R ING L FV
Sbjct: 110 NEAIELAKDFSDQKSARFINGLLSQFV 136
>TIGR_CMR|GSU_1692 [details] [associations]
symbol:GSU_1692 "N utilization substance protein B"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006353
"DNA-dependent transcription, termination" evidence=ISS]
HAMAP:MF_00073 InterPro:IPR006027 InterPro:IPR011605 Pfam:PF01029
GO:GO:0006355 GO:GO:0003723 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0006353 eggNOG:COG0781 HOGENOM:HOG000281867 KO:K03625
Gene3D:1.10.940.10 PANTHER:PTHR11078 SUPFAM:SSF48013
TIGRFAMs:TIGR01951 OMA:QMPGVDK HSSP:Q9X286 RefSeq:NP_952743.1
ProteinModelPortal:Q74CI1 GeneID:2685421 KEGG:gsu:GSU1692
PATRIC:22026233 ProtClustDB:CLSK828489
BioCyc:GSUL243231:GH27-1722-MONOMER Uniprot:Q74CI1
Length = 138
Score = 92 (37.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 26/73 (35%), Positives = 39/73 (53%)
Query: 209 HVHIIDKVVPPIWKVWKMDQPAGRILELSILHLAMSEITVVGT-RHQIVINEAVDLAKRF 267
H ID + K W + + A R+ +LSIL +AM E+ + INEA+++AK+F
Sbjct: 57 HRQEIDTAITGASKNWSIGRMA-RV-DLSILRMAMYELLFRSDIPKNVTINEAIEVAKKF 114
Query: 268 CDGAAPRIINGCL 280
+P ING L
Sbjct: 115 GTEDSPAFINGIL 127
Score = 43 (20.2 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 97 RAARELALLVVYAACLEGSDPIRLFEKRLNSRREPG 132
R RELAL ++Y+ + L E L+ EPG
Sbjct: 5 RLGRELALQMLYSRDYAAGEAAPLLELVLDES-EPG 39
>TIGR_CMR|DET_1278 [details] [associations]
symbol:DET_1278 "N utilization substance protein B"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0006353
"DNA-dependent transcription, termination" evidence=ISS]
HAMAP:MF_00073 InterPro:IPR006027 InterPro:IPR011605 Pfam:PF01029
GO:GO:0006355 GO:GO:0003723 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0006353 eggNOG:COG0781 HOGENOM:HOG000281867 KO:K03625
Gene3D:1.10.940.10 PANTHER:PTHR11078 SUPFAM:SSF48013
TIGRFAMs:TIGR01951 HSSP:Q9X286 RefSeq:YP_181990.1
ProteinModelPortal:Q3Z709 STRING:Q3Z709 GeneID:3229397
KEGG:det:DET1278 PATRIC:21609585 OMA:MKTYRRQ ProtClustDB:CLSK836998
BioCyc:DETH243164:GJNF-1279-MONOMER Uniprot:Q3Z709
Length = 143
Score = 96 (38.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 26/84 (30%), Positives = 45/84 (53%)
Query: 209 HVHIIDKVVPPIWKVWKMDQPAGRILELSILHLAMSEITVVG-TRHQIVINEAVDLAKRF 267
H ++D+ + W ++Q + ++ ++L LA+ EI ++ INEAV+LAK F
Sbjct: 57 HKDLLDENIRQFASAWPVEQLS--YIDRNVLRLAIFEIIHENDVPIKVAINEAVELAKSF 114
Query: 268 CDGAAPRIINGCLRTFVRNLEGTA 291
++ R ING L + + L TA
Sbjct: 115 GGNSSARFINGVLSSVSKALADTA 138
Score = 38 (18.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 95 SPRAARELALLVVYAACLEGSDPIRLFEKRLNS--RREPGYEF 135
S R ARE+ L +Y L G + + ++ L + E EF
Sbjct: 4 SRRKAREIVLQALYEQDLAGHNAEDVLKRLLTETPQTEENAEF 46
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.130 0.374 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 306 306 0.00099 115 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 620 (66 KB)
Total size of DFA: 210 KB (2116 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.33u 0.08s 25.41t Elapsed: 00:00:01
Total cpu time: 25.33u 0.08s 25.41t Elapsed: 00:00:01
Start: Fri May 10 16:06:10 2013 End: Fri May 10 16:06:11 2013