Query 021862
Match_columns 306
No_of_seqs 105 out of 1073
Neff 8.6
Searched_HMMs 13730
Date Mon Mar 25 10:26:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021862.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/021862hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1p3da3 c.72.2.1 (A:107-321) U 100.0 5.6E-38 4.1E-42 267.9 19.9 204 34-253 4-215 (215)
2 d2jfga3 c.72.2.1 (A:94-297) UD 100.0 7.5E-37 5.5E-41 258.7 19.7 201 32-253 2-204 (204)
3 d1e8ca3 c.72.2.1 (A:104-337) U 100.0 1.2E-36 9.1E-41 262.1 19.9 208 41-254 3-234 (234)
4 d1gg4a4 c.72.2.1 (A:99-312) UD 100.0 3.3E-36 2.4E-40 255.8 18.9 201 44-253 3-213 (214)
5 d1j6ua3 c.72.2.1 (A:89-295) UD 100.0 8.7E-34 6.3E-38 240.5 19.0 200 31-253 1-207 (207)
6 d1o5za2 c.72.2.2 (A:-2-293) Fo 100.0 1E-31 7.5E-36 239.9 19.9 221 27-255 24-296 (296)
7 d2gc6a2 c.72.2.2 (A:1-296) Fol 100.0 8.7E-31 6.4E-35 233.8 17.9 213 29-251 22-294 (296)
8 d1gg4a1 c.59.1.1 (A:313-447) U 98.8 1.1E-09 8.2E-14 84.5 5.3 48 255-303 1-50 (135)
9 d2jfga2 c.59.1.1 (A:298-437) U 98.8 4.2E-09 3.1E-13 81.7 6.6 51 254-305 1-52 (140)
10 d1j6ua2 c.59.1.1 (A:296-446) U 98.3 5.3E-07 3.9E-11 70.3 5.9 47 254-301 1-52 (151)
11 d1o5za1 c.59.1.2 (A:294-430) F 98.0 3.6E-06 2.6E-10 64.2 6.2 46 257-305 1-50 (137)
12 d2gc6a1 c.59.1.2 (A:297-425) F 98.0 2.4E-06 1.7E-10 64.4 3.9 46 256-305 2-50 (129)
13 d1p3da2 c.59.1.1 (A:322-473) U 97.9 6.4E-06 4.7E-10 63.5 4.9 47 254-301 1-54 (152)
14 d1j6ua1 c.5.1.1 (A:0-88) UDP-N 96.7 0.00041 3E-08 48.3 2.8 27 4-30 63-89 (89)
15 d1byia_ c.37.1.10 (A:) Dethiob 95.6 0.0038 2.8E-07 49.8 3.8 31 44-74 2-35 (224)
16 d1xjca_ c.37.1.10 (A:) Molybdo 92.7 0.053 3.8E-06 41.1 4.4 34 43-76 1-36 (165)
17 d2afhe1 c.37.1.10 (E:1-289) Ni 92.5 0.05 3.7E-06 45.3 4.4 32 43-74 2-35 (289)
18 d1a7ja_ c.37.1.6 (A:) Phosphor 92.5 0.039 2.9E-06 46.3 3.6 33 41-73 2-36 (288)
19 d1nksa_ c.37.1.1 (A:) Adenylat 91.6 0.071 5.2E-06 40.7 4.0 31 43-73 1-33 (194)
20 d1np6a_ c.37.1.10 (A:) Molybdo 91.2 0.099 7.2E-06 39.1 4.4 33 43-75 2-36 (170)
21 d1hyqa_ c.37.1.10 (A:) Cell di 89.6 0.13 9.5E-06 40.7 4.0 32 43-74 1-35 (232)
22 d1cp2a_ c.37.1.10 (A:) Nitroge 88.7 0.16 1.1E-05 41.5 4.0 32 43-74 1-34 (269)
23 d2qm8a1 c.37.1.10 (A:5-327) Me 88.7 0.45 3.3E-05 40.2 7.0 35 41-75 49-85 (323)
24 d2p67a1 c.37.1.10 (A:1-327) LA 87.4 0.33 2.4E-05 41.2 5.3 34 41-74 52-87 (327)
25 d1khta_ c.37.1.1 (A:) Adenylat 87.1 0.26 1.9E-05 37.0 4.1 30 44-73 2-33 (190)
26 d1ihua2 c.37.1.10 (A:308-586) 86.4 0.28 2E-05 40.1 4.1 35 42-76 19-55 (279)
27 d1g3qa_ c.37.1.10 (A:) Cell di 86.4 0.29 2.1E-05 38.6 4.1 31 44-74 3-36 (237)
28 d1sq5a_ c.37.1.6 (A:) Pantothe 85.6 0.33 2.4E-05 40.8 4.2 33 42-74 79-115 (308)
29 d1rz3a_ c.37.1.6 (A:) Hypothet 84.4 0.44 3.2E-05 36.1 4.2 32 42-73 21-54 (198)
30 d1aoea_ c.71.1.1 (A:) Dihydrof 82.2 0.32 2.3E-05 37.9 2.5 51 250-301 64-114 (192)
31 d1ihua1 c.37.1.10 (A:1-296) Ar 80.6 0.44 3.2E-05 38.9 3.0 36 42-77 7-44 (296)
32 d1vhta_ c.37.1.1 (A:) Dephosph 78.1 0.72 5.2E-05 35.9 3.4 27 43-73 2-31 (208)
33 d1ls1a2 c.37.1.10 (A:89-295) G 78.1 1.1 7.7E-05 35.2 4.4 36 42-77 9-46 (207)
34 d1gsia_ c.37.1.1 (A:) Thymidyl 77.6 0.99 7.2E-05 34.6 4.1 30 45-74 2-33 (208)
35 d1uj2a_ c.37.1.6 (A:) Uridine- 77.3 0.75 5.5E-05 35.7 3.3 26 44-69 3-30 (213)
36 d1okkd2 c.37.1.10 (D:97-303) G 76.7 1.3 9.8E-05 34.6 4.6 36 42-77 5-42 (207)
37 d1vmaa2 c.37.1.10 (A:82-294) G 76.4 1.3 9.6E-05 34.8 4.5 37 41-77 9-47 (213)
38 d2i3ba1 c.37.1.11 (A:1-189) Ca 76.0 0.98 7.1E-05 33.4 3.6 30 44-73 2-33 (189)
39 d2vo1a1 c.37.1.10 (A:1-273) CT 74.8 1.3 9.3E-05 36.0 4.0 31 43-73 1-35 (273)
40 d1deka_ c.37.1.1 (A:) Deoxynuc 74.4 0.95 6.9E-05 35.8 3.2 27 43-72 1-29 (241)
41 d1m8pa3 c.37.1.15 (A:391-573) 73.5 1.6 0.00012 32.0 4.2 30 42-71 5-36 (183)
42 d1jjva_ c.37.1.1 (A:) Dephosph 73.3 1.1 8.1E-05 34.6 3.3 26 44-73 3-30 (205)
43 d2qy9a2 c.37.1.10 (A:285-495) 73.0 1.9 0.00014 33.8 4.7 35 43-77 9-45 (211)
44 d1nn5a_ c.37.1.1 (A:) Thymidyl 70.3 2.1 0.00015 33.2 4.4 33 43-75 3-37 (209)
45 d1qhxa_ c.37.1.3 (A:) Chloramp 69.0 1.5 0.00011 32.1 3.1 25 43-67 3-29 (178)
46 d1j8yf2 c.37.1.10 (F:87-297) G 68.5 2.3 0.00017 33.3 4.1 35 43-77 12-48 (211)
47 d1uf9a_ c.37.1.1 (A:) Dephosph 67.7 1.8 0.00013 32.7 3.3 27 43-73 3-31 (191)
48 d1lw7a2 c.37.1.1 (A:220-411) T 64.8 2 0.00015 31.5 3.1 23 43-65 7-31 (192)
49 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 63.0 2 0.00014 38.7 3.1 30 41-71 25-55 (623)
50 d1odfa_ c.37.1.6 (A:) Hypothet 62.5 4.6 0.00033 33.1 5.1 25 43-67 27-53 (286)
51 d1x6va3 c.37.1.4 (A:34-228) Ad 59.9 5.1 0.00037 29.6 4.7 31 42-72 18-50 (195)
52 d1s1ma2 c.37.1.10 (A:1-266) CT 58.8 4.4 0.00032 32.6 4.1 32 42-73 2-37 (266)
53 d1kaga_ c.37.1.2 (A:) Shikimat 57.0 2.6 0.00019 30.0 2.4 21 45-65 4-26 (169)
54 d2g0ta1 c.37.1.10 (A:1-338) Hy 56.6 4.7 0.00034 33.7 4.1 135 11-146 117-295 (338)
55 d4tmka_ c.37.1.1 (A:) Thymidyl 56.5 5.3 0.00039 30.4 4.3 30 44-73 3-34 (210)
56 d1uaaa1 c.37.1.19 (A:2-307) DE 56.5 1.9 0.00014 34.8 1.6 29 42-71 16-45 (306)
57 d1rkba_ c.37.1.1 (A:) Adenylat 55.8 3.6 0.00026 29.8 3.0 22 44-65 5-28 (173)
58 d1eg7a_ c.37.1.10 (A:) Formylt 55.0 5.6 0.00041 35.3 4.5 32 42-73 50-87 (549)
59 d1nija1 c.37.1.10 (A:2-223) Hy 52.2 4.5 0.00033 31.5 3.2 30 42-74 2-34 (222)
60 d1vcoa2 c.37.1.10 (A:11-282) C 51.1 7 0.00051 31.5 4.1 31 43-73 2-36 (272)
61 d1e6ca_ c.37.1.2 (A:) Shikimat 49.5 3 0.00022 30.8 1.6 21 46-66 5-27 (170)
62 d1ye8a1 c.37.1.11 (A:1-178) Hy 48.4 5.9 0.00043 28.8 3.2 22 46-67 3-26 (178)
63 d1viaa_ c.37.1.2 (A:) Shikimat 47.0 5.7 0.00042 28.9 2.9 21 46-66 3-25 (161)
64 d1p5zb_ c.37.1.1 (B:) Deoxycyt 46.6 1.3 9.4E-05 34.7 -1.1 30 42-71 1-32 (241)
65 d1knqa_ c.37.1.17 (A:) Glucona 46.4 8.1 0.00059 27.7 3.7 25 42-66 5-31 (171)
66 d1bifa1 c.37.1.7 (A:37-249) 6- 45.9 5.7 0.00042 29.7 2.8 29 45-73 4-34 (213)
67 d1q3ta_ c.37.1.1 (A:) CMP kina 45.6 8 0.00059 29.3 3.7 30 44-76 4-35 (223)
68 d1ewqa2 c.37.1.12 (A:542-765) 44.6 11 0.00081 29.3 4.4 29 44-72 36-68 (224)
69 d2bdta1 c.37.1.25 (A:1-176) Hy 43.0 6.6 0.00048 28.0 2.7 22 44-65 3-26 (176)
70 d1pjra1 c.37.1.19 (A:1-318) DE 38.9 8.9 0.00065 30.9 3.1 29 41-70 25-54 (318)
71 d1sb8a_ c.2.1.2 (A:) UDP-N-ace 38.2 9.6 0.0007 31.1 3.2 44 29-74 2-45 (341)
72 d1tmka_ c.37.1.1 (A:) Thymidyl 37.8 8.8 0.00064 29.4 2.7 30 42-71 2-33 (214)
73 d1m7ga_ c.37.1.4 (A:) Adenosin 36.4 23 0.0017 26.8 5.1 32 41-72 22-56 (208)
74 d2q46a1 c.2.1.2 (A:2-253) Hypo 36.2 14 0.00099 27.6 3.7 29 42-72 2-30 (252)
75 d2vp4a1 c.37.1.1 (A:12-208) De 35.7 5 0.00036 30.0 0.8 25 43-67 9-35 (197)
76 d1y63a_ c.37.1.1 (A:) Probable 35.7 13 0.00093 26.6 3.3 23 44-66 6-30 (174)
77 d1j3ka_ c.71.1.1 (A:) Bifuncti 35.3 9.2 0.00067 30.1 2.4 50 251-301 115-166 (231)
78 d1zp6a1 c.37.1.25 (A:6-181) Hy 34.5 12 0.00087 26.8 2.9 22 42-63 3-26 (176)
79 d2ocpa1 c.37.1.1 (A:37-277) De 33.9 9.4 0.00068 29.4 2.3 28 43-70 2-31 (241)
80 d1ukza_ c.37.1.1 (A:) Uridylat 33.7 14 0.00098 27.4 3.2 25 41-65 6-32 (196)
81 d1qf9a_ c.37.1.1 (A:) UMP/CMP 33.6 16 0.0011 26.9 3.6 28 42-72 5-34 (194)
82 d1ckea_ c.37.1.1 (A:) CMP kina 32.4 14 0.001 27.6 3.1 32 43-77 3-36 (225)
83 d1yrba1 c.37.1.10 (A:1-244) AT 31.4 18 0.0013 27.4 3.7 28 45-73 2-31 (244)
84 d1mw7a_ e.39.1.1 (A:) Hypothet 29.9 55 0.004 24.9 6.4 58 227-288 28-90 (220)
85 d3dfra_ c.71.1.1 (A:) Dihydrof 29.1 14 0.001 27.1 2.4 51 248-301 48-99 (162)
86 d1jwyb_ c.37.1.8 (B:) Dynamin 29.0 15 0.0011 29.6 2.8 20 42-61 23-44 (306)
87 d2iyva1 c.37.1.2 (A:2-166) Shi 28.5 13 0.00091 26.9 2.1 21 46-66 4-26 (165)
88 d1wb9a2 c.37.1.12 (A:567-800) 27.1 25 0.0018 27.3 3.8 31 42-72 40-74 (234)
89 d1g7sa4 c.37.1.8 (A:1-227) Ini 27.0 19 0.0014 27.5 3.1 20 42-61 4-25 (227)
90 d1sxjb2 c.37.1.20 (B:7-230) Re 26.8 20 0.0014 27.1 3.1 26 42-67 35-62 (224)
91 d2fzia1 c.71.1.1 (A:1-206) Dih 26.6 20 0.0015 27.2 3.1 13 251-263 68-80 (206)
92 d1ly1a_ c.37.1.1 (A:) Polynucl 25.3 23 0.0017 24.5 3.1 18 44-61 3-22 (152)
93 d1r0wa_ c.37.1.12 (A:) Cystic 25.1 21 0.0015 28.6 3.1 26 41-66 60-87 (281)
94 d1mv5a_ c.37.1.12 (A:) Multidr 25.0 23 0.0016 27.7 3.2 26 41-66 26-53 (242)
95 d1jj7a_ c.37.1.12 (A:) Peptide 24.7 23 0.0017 27.9 3.1 26 41-66 38-65 (251)
96 d1p9ra_ c.37.1.11 (A:) Extrace 23.6 31 0.0023 29.0 4.0 37 35-71 150-188 (401)
97 d3b60a1 c.37.1.12 (A:329-581) 22.6 25 0.0018 27.7 3.0 25 42-66 40-66 (253)
98 d1oxxk2 c.37.1.12 (K:1-242) Gl 22.5 23 0.0017 27.7 2.7 26 41-66 29-56 (242)
99 d1rtta_ c.23.5.4 (A:) Hypothet 22.5 32 0.0024 25.0 3.5 25 43-67 1-25 (174)
100 d1df7a_ c.71.1.1 (A:) Dihydrof 22.1 7.9 0.00057 28.5 -0.3 16 248-263 49-65 (159)
101 d1kmva_ c.71.1.1 (A:) Dihydrof 21.4 20 0.0015 26.7 2.1 53 248-301 59-117 (186)
102 d2akab1 c.37.1.8 (B:6-304) Dyn 20.9 26 0.0019 27.8 2.8 20 42-61 25-46 (299)
103 d3d31a2 c.37.1.12 (A:1-229) Su 20.7 34 0.0025 26.4 3.4 26 41-66 24-51 (229)
104 d1pl8a2 c.2.1.1 (A:146-316) Ke 20.6 48 0.0035 23.6 4.2 35 268-303 97-131 (171)
105 d1teva_ c.37.1.1 (A:) UMP/CMP 20.4 38 0.0028 24.5 3.6 27 44-73 2-30 (194)
106 d2pmka1 c.37.1.12 (A:467-707) 20.4 30 0.0022 27.0 3.0 25 42-66 28-54 (241)
No 1
>d1p3da3 c.72.2.1 (A:107-321) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=100.00 E-value=5.6e-38 Score=267.91 Aligned_cols=204 Identities=18% Similarity=0.218 Sum_probs=157.2
Q ss_pred HHHhhCCCCCcEEEEecCCChhhHHHHHHHHHHhcCCCcccc-cCCChhhhhhhhccccCCCCCCCCcEEEEEecccccc
Q 021862 34 FAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVG-GNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQME 112 (306)
Q Consensus 34 ~~~~~~~~~~~~I~VtGT~GKTTt~~ll~~iL~~~g~~~~~~-g~~g~~~~~~~~~~~~~~~~~~~~~~~V~E~~~~~~~ 112 (306)
.+.++. +..++|+||||||||||++||+++|++.|+++... |....++.... .....+++|+|+++++..
T Consensus 4 ~L~~~~-r~~~~I~ITGTnGKTTt~~~l~~iL~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~~v~E~~~~~~~ 74 (215)
T d1p3da3 4 MLAEIM-RFRHGIAVAGTHGKTTTTAMISMIYTQAKLDPTFVNGGLVKSAGKNA--------HLGASRYLIAEADESDAS 74 (215)
T ss_dssp HHHHHH-HTSEEEEEESSSCHHHHHHHHHHHHHHTTCCCEEEEEEEETTTTEEE--------ECCSSSEEEEECCCTTSG
T ss_pred HHHHHH-cCCCEEEEECCCCHHHHHHHHHHHHHhCCCCceEeeCceeccCcccc--------ccCCCceEEEEcCCcccc
Confidence 344444 45589999999999999999999999999988543 33322222111 123557899999988765
Q ss_pred cCCceecccEEEEecCChhhhhcc-CCHHHHHHHHHHhhccccCCeeEEEeCCChhhHHHHhcccccEEEeccCCCeee-
Q 021862 113 IPNKYFCPTVSVVLNLTPDHLERH-KTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPGVKI- 190 (306)
Q Consensus 113 ~~~~~~~p~i~viTni~~dH~~~~-gt~e~~~~~k~~i~~~~~~~~~~V~n~dd~~~~~~~~~~~~~~~~~g~~~~~~~- 190 (306)
... ++||++|||||++||+|+| +++|+|+++|.++++.++++|.+|+|.||+....+.+....++++||...+...
T Consensus 75 ~~~--~~p~~~viTNi~~dHld~~~~s~e~~~~~K~~i~~~~~~~g~~V~n~dd~~~~~~~~~~~~~~~~~g~~~~~~~~ 152 (215)
T d1p3da3 75 FLH--LQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVLMELVPKVGRQVITYGFSEQADYR 152 (215)
T ss_dssp GGG--CCCSEEEECCCCCCSGGGGTTCHHHHHHHHHHHHTTSCTTCEEEEETTCHHHHHHHHHHCSEEEEEESSTTCSEE
T ss_pred cee--EcCCEEEEecccccccccccCCHHHHHHHHHHHHhcCCCCCEEEEeCcchHHHHHHHhcCCceEEEccccccccc
Confidence 543 7999999999999999988 699999999999999999999999999999999998888888999997654211
Q ss_pred ----ccccccce-EEEecCCeeeEEEeeccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHHhhcCC
Q 021862 191 ----DTEAKTAS-FEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253 (306)
Q Consensus 191 ----~~~~~~~~-~~~~~~~~~~~~~~~~~~l~G~~~~~N~l~A~~~a~~~~lg~~~~~i~~~l~~~~ 253 (306)
........ ........... +.++++|+||++|+++|+ ++|..+|+++++|.++|++|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~---~~l~l~G~hn~~N~laAi--a~a~~lGi~~~~i~~~L~~Fk 215 (215)
T d1p3da3 153 IEDYEQTGFQGHYTVICPNNERIN---VLLNVPGKHNALNATAAL--AVAKEEGIANEAILEALADFQ 215 (215)
T ss_dssp EEEEEEETTEEEEEEECTTCCEEE---EEESSCSHHHHHHHHHHH--HHHHHTTCCHHHHHHHHHTCC
T ss_pred ccccccccccccccccccccceee---EEeCCCCHHHHHHHHHHH--HHHHHcCCCHHHHHHHHHhcC
Confidence 11111111 11222222233 378999999999999999 899999999999999999986
No 2
>d2jfga3 c.72.2.1 (A:94-297) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=7.5e-37 Score=258.71 Aligned_cols=201 Identities=27% Similarity=0.418 Sum_probs=157.8
Q ss_pred HHHHHhhCCCCCcEEEEecCCChhhHHHHHHHHHHhcCCCcccccCCChhhhhhhhccccCCCCCCCCcEEEEEeccccc
Q 021862 32 LDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQM 111 (306)
Q Consensus 32 ~~~~~~~~~~~~~~I~VtGT~GKTTt~~ll~~iL~~~g~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~V~E~~~~~~ 111 (306)
++.+.+.. +.|+|+||||||||||++||.++|++.|.++++.|+.|.|..... .++.+++|+|+++++.
T Consensus 2 ~~lf~~~~--~~~vI~VTGT~GKTTt~~~l~~iL~~~g~~~~~~~~~~~~~~~~~---------~~~~~~~V~E~~~~~~ 70 (204)
T d2jfga3 2 IELFCREA--QAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLL---------DDECELYVLELSSFQL 70 (204)
T ss_dssp HHHHHHHC--CSCEEEEECSSSHHHHHHHHHHHHHHTTCCEEEEETTSSCGGGGC---------CTTCCEEEEECCHHHH
T ss_pred HHHHhhcC--CCCEEEEECCCCHHHHHHHHHHHHHhcCCCcccCCcccccccccc---------cccceEEEEeeccccc
Confidence 56666666 789999999999999999999999999999999999998865432 4567899999998765
Q ss_pred ccCCceecccEEEEecCChhhhhccCC-HHHHHHHHHHhhccccCCeeEEEeCCChhhHHHHhcccccEEEeccCCC-ee
Q 021862 112 EIPNKYFCPTVSVVLNLTPDHLERHKT-MKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPG-VK 189 (306)
Q Consensus 112 ~~~~~~~~p~i~viTni~~dH~~~~gt-~e~~~~~k~~i~~~~~~~~~~V~n~dd~~~~~~~~~~~~~~~~~g~~~~-~~ 189 (306)
..... ++|+++|||||++||+|+|++ ++.+.+.|..+++ +++.+|+|.||+....+. ....++++||.... ..
T Consensus 71 ~~~~~-~~p~i~viTNi~~dHld~~~~~~~~~~~~~~~i~~---~~~~~v~n~dd~~~~~~~-~~~~~~i~~~~~~~~~~ 145 (204)
T d2jfga3 71 ETTSS-LQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYE---NAKVCVVNADDALTMPIR-GADERCVSFGVNMGDYH 145 (204)
T ss_dssp HTCCC-CCCSEEEECCCCSCCGGGCTTHHHHHHHHHHGGGT---TCSEEEEETTCGGGSCTT-CCCTTEEEECSSSSSEE
T ss_pred ccccc-cccccceeeeeccccccccccHHHHHHHHHHhhhc---cccceeehhhhHHHHHHH-ccCCceEEeeccccchh
Confidence 54443 899999999999999999996 8999999998876 467899999999876653 45667889987532 22
Q ss_pred eccccccceEEEecCCeeeEEEeeccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHHhhcCC
Q 021862 190 IDTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253 (306)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~N~l~A~~~a~~~~lg~~~~~i~~~l~~~~ 253 (306)
.........+.+ .+. ..+...+++++|+||++|+++|+ ++|..+|+++++|+++|++|.
T Consensus 146 ~~~~~~~~~~~~--~~~-~~~~~~~~~l~G~hn~~N~laAi--a~a~~lGi~~~~i~~~L~~Ft 204 (204)
T d2jfga3 146 LNHQQGETWLRV--KGE-KVLNVKEMKLSGQHNYTNALAAL--ALADAAGLPRASSLKALTTFT 204 (204)
T ss_dssp EEEETTEEEEEE--TTE-EEEEGGGCSCCSHHHHHHHHHHH--HHHHHTTCCHHHHHHHHHHCC
T ss_pred hcccccccceee--cCC-ccccccccCCCcHHHHHHHHHHH--HHHHHcCCCHHHHHHHHHhcC
Confidence 221111112222 221 12223468999999999999999 899999999999999999884
No 3
>d1e8ca3 c.72.2.1 (A:104-337) UDP-N-acetylmuramyl tripeptide synthetase MurE {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=1.2e-36 Score=262.05 Aligned_cols=208 Identities=22% Similarity=0.214 Sum_probs=155.6
Q ss_pred CCCcEEEEecCCChhhHHHHHHHHHHhcCCCcccccCCChhhhhhhhccc-cCC-----------CCCCCCcEEEEEecc
Q 021862 41 RSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCI-ALP-----------SSKPKFQVAVVEVSS 108 (306)
Q Consensus 41 ~~~~~I~VtGT~GKTTt~~ll~~iL~~~g~~~~~~g~~g~~~~~~~~~~~-~~~-----------~~~~~~~~~V~E~~~ 108 (306)
+++++|+||||||||||++||.++|+..|+++++.|+.|.+......... .++ ....+++++++|+++
T Consensus 3 ~~~~vI~ITGT~GKTTt~~~l~~iL~~~g~~~~~~gt~g~~~~~~~~~~~~~t~~~~~~~~~l~~~~~~~~~~~~le~ss 82 (234)
T d1e8ca3 3 DNLRLVGVTGTNGKTTTTQLLAQWSQLLGEISAVMGTVGNGLLGKVIPTENTTGSAVDVQHELAGLVDQGATFCAMEVSS 82 (234)
T ss_dssp GSSEEEEEESSSCHHHHHHHHHHHHHHTTCCEEEEETTEEEETTCCBCCSSSSCCHHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred cCCeEEEEECCCcHHHHHHHHHHHHHHCCCCeEEECccccCcCccccccccccccchhHHHHHHHHhhcCCceeeeccCc
Confidence 47899999999999999999999999999999888887665432221110 000 124467899999997
Q ss_pred ccc-ccCCceecccEEEEecCChhhhhccCCHHHHHHHHHHhhccccCCeeEEEeCCChhhHHHHhcccccEEE-eccCC
Q 021862 109 YQM-EIPNKYFCPTVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAW-IGAFP 186 (306)
Q Consensus 109 ~~~-~~~~~~~~p~i~viTni~~dH~~~~gt~e~~~~~k~~i~~~~~~~~~~V~n~dd~~~~~~~~~~~~~~~~-~g~~~ 186 (306)
.+. ......++|+++|||||++||+|+|+++|+|+++|.++++. .+.+.+|+|.||+....+.+.....+.. ++...
T Consensus 83 ~g~~~~~~~~~~p~i~vitNi~~dHld~~~~~e~~~~~K~~i~~~-~~~~~~iin~Dd~~~~~~~~~~~~~~~~~~~~~~ 161 (234)
T d1e8ca3 83 HGLVQHRVAALKFAASVFTNLSRDHLDYHGDMEHYEAAKWLLYSE-HHCGQAIINADDEVGRRWLAKLPDAVAVSMEDHI 161 (234)
T ss_dssp HHHHTTTTTTCBCSEEEECCCCSCCHHHHSSHHHHHHHHHHHHHT-SBCCEEEEETTSHHHHHHHTTCTTCEEEESSSCC
T ss_pred cchhhhhhcccccceEEEeeccccchhhhccccceehhhhccccc-cccceeEEecccccchhhhhhhccceeeeecccc
Confidence 544 33333589999999999999999999999999999999986 4568899999999999988776544332 22211
Q ss_pred Ce-----ee-----ccccccceEEEecCCeeeEEEeeccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHHhhcCCC
Q 021862 187 GV-----KI-----DTEAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILRT 254 (306)
Q Consensus 187 ~~-----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~N~l~A~~~a~~~~lg~~~~~i~~~l~~~~~ 254 (306)
+. .+ ........+.+...+.... ++++++|+||++|+++|+ ++|+.+|+++++|.++|++|+|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~l~G~hni~N~laAi--ava~~lGi~~~~i~~~l~~fkP 234 (234)
T d1e8ca3 162 NPNCHGRWLKATEVNYHDSGATIRFSSSWGDGE---IESHLMGAFNVSNLLLAL--ATLLALGYPLADLLKTAARLQP 234 (234)
T ss_dssp CTTTCSEEEEEEEEEECSSCEEEEEEETTCCEE---EEECSCSHHHHHHHHHHH--HHHHHTTCCHHHHHHHGGGCCC
T ss_pred ccccccccccccccccccccceeeeecCCceEE---EEeCCCCHHHHHHHHHHH--HHHHHcCCCHHHHHHHHhhCCC
Confidence 10 01 1111223344444333333 378999999999999999 8999999999999999999997
No 4
>d1gg4a4 c.72.2.1 (A:99-312) UDP-murNac-tripeptide D-alanyl-D-alanine-adding enzyme MurF {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=3.3e-36 Score=255.78 Aligned_cols=201 Identities=21% Similarity=0.316 Sum_probs=151.2
Q ss_pred cEEEEecCCChhhHHHHHHHHHHhcCCCcccccCCChhhhhhhhccccCCCCCCCCcEEEEEeccccccc---CCceecc
Q 021862 44 KILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSSYQMEI---PNKYFCP 120 (306)
Q Consensus 44 ~~I~VtGT~GKTTt~~ll~~iL~~~g~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~V~E~~~~~~~~---~~~~~~p 120 (306)
++|+||||||||||++||++||++.|.++++.|+++.++...... .....+.++.++|+++.+... ....+.|
T Consensus 3 kvI~VTGTnGKTTt~~mi~~iL~~~g~~~~~~g~~n~~~g~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p 78 (214)
T d1gg4a4 3 RVVALTGSSGKTSVKEMTAAILSQCGNTLYTAGNLNNDIGVPMTL----LRLTPEYDYAVIELGANHQGEIAWTVSLTRP 78 (214)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHTTTSCEEECCTTCCSTTHHHHHH----TTCCTTCSEEEEECCCSSSSHHHHHHHHHCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHHhCCCCEEEeCcccCccccchhh----hhcccccccchhhhhhhhcccccccccccCc
Confidence 699999999999999999999999999999999887766433211 112456788999999654322 2224689
Q ss_pred cEEEEecCChhhhhccCCHHHHHHHHHHhhccccCCeeEEEeCCChhhHHHHhccc-ccEEEeccCCC---ee---eccc
Q 021862 121 TVSVVLNLTPDHLERHKTMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHR-FNLAWIGAFPG---VK---IDTE 193 (306)
Q Consensus 121 ~i~viTni~~dH~~~~gt~e~~~~~k~~i~~~~~~~~~~V~n~dd~~~~~~~~~~~-~~~~~~g~~~~---~~---~~~~ 193 (306)
+++|+|||++||+|+|+++|+|+++|..+++.++++|.+|+|.||+....+..... .++.+|+.... +. ...+
T Consensus 79 ~~~viTNi~~dHld~~~~~~~~~~~k~~~~~~~~~~g~~v~n~dd~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~~~~~~ 158 (214)
T d1gg4a4 79 EAALVNNLAAAHLEGFGSLAGVAKAKGEIFSGLPENGIAIMNADNNDWLNWQSVIGSRKVWRFSPNAANSDFTATNIHVT 158 (214)
T ss_dssp SEEEECCCC--------CHHHHHHHHHGGGGGCCTTCEEEEETTBCCHHHHHHHHTTSEEEEECSSCTTCSBEEEEEEEC
T ss_pred hheeeehhccccccccccHHHHHhhhhhHhhhhccCCccccccccHHHHHHHHHhcCCceeeeccCCCCcceeeeeEEEe
Confidence 99999999999999999999999999999999999999999999999988776553 46677886532 21 1112
Q ss_pred cccceEEEecCCeeeEEEeeccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHHhhcCC
Q 021862 194 AKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253 (306)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~N~l~A~~~a~~~~lg~~~~~i~~~l~~~~ 253 (306)
.....+.+...+..++ +.++++|+||++|+++|+ ++|..+|++++.|.++|++|+
T Consensus 159 ~~~~~~~i~~~~~~~~---~~l~l~G~hn~~NalaAi--a~~~~lgi~~~~i~~~l~~fk 213 (214)
T d1gg4a4 159 SHGTEFTLQTPTGSVD---VLLPLPGRHNIANALAAA--ALSMSVGATLDAIKAGLANLK 213 (214)
T ss_dssp SSSEEEEEEETTEEEE---EEECSSSTHHHHHHHHHH--HHHHHTTCCHHHHHHHHTTCC
T ss_pred CCceEEEEEECCceEE---EEeCCCCHHHHHHHHHHH--HHHHHcCCCHHHHHHHHHhcC
Confidence 2334555555444444 378999999999999999 899999999999999999997
No 5
>d1j6ua3 c.72.2.1 (A:89-295) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=100.00 E-value=8.7e-34 Score=240.49 Aligned_cols=200 Identities=22% Similarity=0.254 Sum_probs=144.0
Q ss_pred hHHHHHhhCC-CCCcEEEEecCCChhhHHHHHHHHHHhcCCCcc-cccCCChhhhhhhhccccCCCCCCCCcEEEEEecc
Q 021862 31 ELDFAAQVIP-RSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAF-VGGNLGNPLSEAAFHCIALPSSKPKFQVAVVEVSS 108 (306)
Q Consensus 31 ~~~~~~~~~~-~~~~~I~VtGT~GKTTt~~ll~~iL~~~g~~~~-~~g~~g~~~~~~~~~~~~~~~~~~~~~~~V~E~~~ 108 (306)
|++++...+. .+.++||||||||||||++||+++|++.|.++. ..|..+.++..... ..+.+++|+|+++
T Consensus 1 r~~~~~~~l~~~~~~~iAITGTnGKTTt~~~l~~iL~~~g~~~~~~~g~~~~~~~~~~~--------~~~~~~~v~e~~e 72 (207)
T d1j6ua3 1 RLHYFRDTLKREKKEEFAVTGTDGKTTTTAMVAHVLKHLRKSPTVFLGGIMDSLEHGNY--------EKGNGPVVYELDE 72 (207)
T ss_dssp HHHHHHHHHHHHCCCEEEEECSSSHHHHHHHHHHHHHHTTCCCEEECSSCCTTSTTSSE--------ECCSSCEEEEECT
T ss_pred ChHHHHHHHhhcCCCEEEEECCCCHHHHHHHHHHHHHhCCCCCeEEECCccccccchhc--------cCCCcceeEEeee
Confidence 3455543331 356899999999999999999999999999863 34555555433221 3345679999998
Q ss_pred cccccCCceecccEEEEecCChhhhhccC-CHHHHHHHHHHhhccccCCeeEEEeCCChhhHHHHhcccccEEEeccCCC
Q 021862 109 YQMEIPNKYFCPTVSVVLNLTPDHLERHK-TMKNYALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKGHRFNLAWIGAFPG 187 (306)
Q Consensus 109 ~~~~~~~~~~~p~i~viTni~~dH~~~~g-t~e~~~~~k~~i~~~~~~~~~~V~n~dd~~~~~~~~~~~~~~~~~g~~~~ 187 (306)
.+.... .++|+++|||||++||+|+|+ ++|.|.++|..+++ +++.+|+|.||+....+.. ++||....
T Consensus 73 ~~~~~~--~~~p~iaviTNI~~dHLd~~~~~~~~~~~~k~~~~~---~~~~~i~n~dd~~~~~~~~------~~~g~~~~ 141 (207)
T d1j6ua3 73 SEEFFS--EFSPNYLIITNARGDHLENYGNSLTRYRSAFEKISR---NTDLVVTFAEDELTSHLGD------VTFGVKKG 141 (207)
T ss_dssp TSGGGG--GCCCSEEEECCCCCCCGGGGTTCHHHHHHHHHHHHH---TCSEEEEETTCTTTGGGCS------EEECSSSS
T ss_pred chhhhh--hhhhceeeeeechhhhhhccCccccccccccchhhh---hcccccccccccccccccc------cccccccc
Confidence 763322 379999999999999999999 79999999999976 4689999999987654432 45554332
Q ss_pred -eeec--c-ccccceEEEecCCeeeEEEeeccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHHhhcCC
Q 021862 188 -VKID--T-EAKTASFEVPAVGVVSQLQLHNMKVMGRHNYHNAAVAALSVLGLDIGVDVEALNSTIEILR 253 (306)
Q Consensus 188 -~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~N~l~A~~~a~~~~lg~~~~~i~~~l~~~~ 253 (306)
..+. . ......+.+...+... ..++++++|.||++|+++|+ ++|..+|++.++|.++|++|+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~l~G~hn~~NalaAi--ava~~lgi~~~~i~~~L~~FK 207 (207)
T d1j6ua3 142 TYTLEMRSASRAEQKAMVEKNGKRY--LELKLKVPGFHNVLNALAVI--ALFDSLGYDLAPVLEALEEFR 207 (207)
T ss_dssp SEEEEEEEECSSCEEEEEEETTEEE--EEEEESSCSHHHHHHHHHHH--HHHHHTTCCHHHHHHHHHHCC
T ss_pred cccccccccccccccccccccCcEE--EEEEeCCCcHHHHHHHHHHH--HHHHHcCCCHHHHHHHHHhcC
Confidence 1111 1 1111122222233221 23478999999999999999 899999999999999999986
No 6
>d1o5za2 c.72.2.2 (A:-2-293) Folylpolyglutamate synthetase {Thermotoga maritima [TaxId: 2336]}
Probab=99.98 E-value=1e-31 Score=239.91 Aligned_cols=221 Identities=16% Similarity=0.136 Sum_probs=148.9
Q ss_pred eeeehHHHHHhhCC---CCCcEEEEecCCChhhHHHHHHHHHHhcCCCcccccCCChh------------hhhhhh----
Q 021862 27 RVMSELDFAAQVIP---RSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGNLGNP------------LSEAAF---- 87 (306)
Q Consensus 27 ~~l~~~~~~~~~~~---~~~~~I~VtGT~GKTTt~~ll~~iL~~~g~~~~~~g~~g~~------------~~~~~~---- 87 (306)
+-|.|+..+...++ +++++|+||||||||||++|+++||++.|+++++.++.+.. .+...+
T Consensus 24 ~~l~r~~~~l~~lg~P~~~lkvI~VTGTNGKTSt~~~i~~IL~~~g~~~g~~~s~~~~~~~e~~~~~~~~i~~~~l~~~~ 103 (296)
T d1o5za2 24 PGLERISMLLSKLGNPHLEYKTIHIGGTNGKGSVANMVSNILVSQGYRVGSYYSPHLSTFRERIRLNEEYISEEDVVKIY 103 (296)
T ss_dssp CCSHHHHHHHHHTTCGGGSSEEEEEECSSSHHHHHHHHHHHHHHHTCCEEEECCSCSSCGGGGEEETTEECCHHHHHHHH
T ss_pred CChHHHHHHHHHcCCchhhCCEEEEEecCcHHHHHHHHHHHHHHcCCCcceecccccccccccceecCceeehHHHHHHH
Confidence 34566555544442 56799999999999999999999999999999766653211 110000
Q ss_pred ----------ccccCC---------------CCCCCCcEEEEEecccccccCCceecccEEEEecCChhhhhcc-CCHHH
Q 021862 88 ----------HCIALP---------------SSKPKFQVAVVEVSSYQMEIPNKYFCPTVSVVLNLTPDHLERH-KTMKN 141 (306)
Q Consensus 88 ----------~~~~~~---------------~~~~~~~~~V~E~~~~~~~~~~~~~~p~i~viTni~~dH~~~~-gt~e~ 141 (306)
+..... .....+|++|+|++.++.......++|+++|||||+.||+|++ +++++
T Consensus 104 ~~v~~~~~~~~~~~~~~~t~~e~~t~~a~~~~~~~~~d~~i~e~~~~g~~d~~~~~~~~i~viTNi~~DHld~L~~t~e~ 183 (296)
T d1o5za2 104 ETMEPILNELDKEEIFSPSFFEVVTAMAFLYFAEKNVDIAVLEVGLGGRLDATNVVFPLCSTIVTVDRDHEKTLGYTIEQ 183 (296)
T ss_dssp HHHHHHHHHHTTSTTTCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSSTTCGGGGCCCSCEEECCCCC-------CCHHH
T ss_pred HHHHHhhhhhhcccCCCCchHHHHHHHHHHHhhhcccceeeeehhhccchhhhhccccchhccccccccchhhccchhhh
Confidence 000000 1135689999999987665544457999999999999999995 59999
Q ss_pred HHHHHHHhhccccCCeeEEEeCCChhhHHHHhc----ccccEEEeccCCCeee-ccccccceEEEecCCeeeEEEeeccC
Q 021862 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIKG----HRFNLAWIGAFPGVKI-DTEAKTASFEVPAVGVVSQLQLHNMK 216 (306)
Q Consensus 142 ~~~~k~~i~~~~~~~~~~V~n~dd~~~~~~~~~----~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (306)
|+.+|..+++ +++.+|++.+++.+..++++ .+.++..++.+..... ..+.....+.+...+.... +.++
T Consensus 184 i~~~K~~i~~---~~~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---i~l~ 257 (296)
T d1o5za2 184 IAWEKSGIIK---ERVPLVTGERKREALKVMEDVARKKSSRMYVIDKDFSVKVKSLKLHENRFDYCGENTFED---LVLT 257 (296)
T ss_dssp HHHHHGGGCC---TTCCEEECCCCHHHHHHHHHHHHHHTCCEEEBTTTBEEEEEECCTTCEEEEEESSSEEEE---EEES
T ss_pred hHHhhhhccc---cCccccccccChHHHHHHHHHHHhcCCcceeeeeeeeeeeccccccCceEEEecCCcccc---cCCC
Confidence 9999999865 57889999888887665543 3445555553222211 1122333455554444333 4889
Q ss_pred CCChhHHHHHHHHHHHHHHHHcC--CCHHHHHHHhhcCCCC
Q 021862 217 VMGRHNYHNAAVAALSVLGLDIG--VDVEALNSTIEILRTP 255 (306)
Q Consensus 217 l~G~~~~~N~l~A~~~a~~~~lg--~~~~~i~~~l~~~~~~ 255 (306)
++|+||++|+++|+ ++|..+| ++.+.|+++|++.+++
T Consensus 258 L~G~hni~Na~~AI--a~~~~lgl~i~~~~I~~gL~~~k~i 296 (296)
T d1o5za2 258 MNGPHQIENAGVAL--KTLEATGLPLSEKAIREGLKNAKNL 296 (296)
T ss_dssp SCSTHHHHHHHHHH--HHHHHHCCCCCHHHHHHHHHHCCCT
T ss_pred CCCHHHHHHHHHHH--HHHHHhCcCCCHHHHHHHHHHhcCC
Confidence 99999999999999 7777766 5778999999998863
No 7
>d2gc6a2 c.72.2.2 (A:1-296) Folylpolyglutamate synthetase {Lactobacillus casei [TaxId: 1582]}
Probab=99.97 E-value=8.7e-31 Score=233.83 Aligned_cols=213 Identities=15% Similarity=0.127 Sum_probs=147.0
Q ss_pred eehHHHHHhhCC---CCCcEEEEecCCChhhHHHHHHHHHHhcCCCcccccC------------CChhhhhhhhcc----
Q 021862 29 MSELDFAAQVIP---RSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFVGGN------------LGNPLSEAAFHC---- 89 (306)
Q Consensus 29 l~~~~~~~~~~~---~~~~~I~VtGT~GKTTt~~ll~~iL~~~g~~~~~~g~------------~g~~~~~~~~~~---- 89 (306)
|.|+..+.+.++ +++++|+||||||||||++|+++||+++|+++++.++ .|.+++...+..
T Consensus 22 l~r~~~~l~~lg~P~~~lkvI~VTGTNGKtST~~~i~~IL~~~G~kvG~~tSP~~~~~~e~~~~~~~~i~~~~~~~~~~~ 101 (296)
T d2gc6a2 22 HRRILTLLHALGNPQQQGRYIHVTGTNGKGSAANAIAHVLEASGLTVGLYTAPFIMRFNERIMIDHEPIPDAALVNAVAF 101 (296)
T ss_dssp CHHHHHHHHHTTCGGGSSCEEEEECSSSHHHHHHHHHHHHHHTTCCEEEECSSCSSCGGGGEEETTEECCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCchhhCCEEEEeccCcHHHHHHHHHHHHHhcCCceeeeecccccchhhhhcccccCCcHHHHHHHHHH
Confidence 444444433331 5789999999999999999999999999999976554 122222111000
Q ss_pred ----------ccCC----------------CCCCCCcEEEEEeccccc-ccCCceecccEEEEecCChhhhhccC-CHHH
Q 021862 90 ----------IALP----------------SSKPKFQVAVVEVSSYQM-EIPNKYFCPTVSVVLNLTPDHLERHK-TMKN 141 (306)
Q Consensus 90 ----------~~~~----------------~~~~~~~~~V~E~~~~~~-~~~~~~~~p~i~viTni~~dH~~~~g-t~e~ 141 (306)
.... ......|++++|++.+.. +..+ .+.|+++++|||+.||++++| |+|+
T Consensus 102 i~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~d~~i~e~g~g~~~d~~~-~~~~~~~viTni~~dH~~~lg~tle~ 180 (296)
T d2gc6a2 102 VRAALERLQQQQADFNVTEFEFITALGYWYFRQRQVDVAVIEVGIGGDTDSTN-VITPVVSVLTEVALDHQKLLGHTITA 180 (296)
T ss_dssp HHHHHHHHHHHSTTCCCCHHHHHHHHHHHHHHHTTCSEEEEECSSSSTTSTTC-SCCCSEEEECCCCSTTHHHHCSSHHH
T ss_pred HHHHHHhHHhhccCCCccHHHHHHHHHHHHHHHhcchhhhhhhHHHHhhhhhh-cccceeecccccchHHHHhhhhHHHH
Confidence 0000 113567999999997654 4454 479999999999999999997 9999
Q ss_pred HHHHHHHhhccccCCeeEEEeCCChhhHHHHh----cccccEEEeccCCCeee---ccccccceEEEecCCeeeEEEeec
Q 021862 142 YALTKCHLFSHMVNTKLGLLPFGNQHLNEAIK----GHRFNLAWIGAFPGVKI---DTEAKTASFEVPAVGVVSQLQLHN 214 (306)
Q Consensus 142 ~~~~k~~i~~~~~~~~~~V~n~dd~~~~~~~~----~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 214 (306)
|+.+|..+++ +++.+|++.+++.+...++ +.+.+.+.++. ++.+ ........+.+..... .+..++
T Consensus 181 Ia~~K~~i~k---~~~~~v~~~~~~~~~~~i~~~~~~~~~~~~~~~~--d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 253 (296)
T d2gc6a2 181 IAKHKAGIIK---RGIPVVTGNLVPDAAAVVAAKVATTGSQWLRFDR--DFSVPKAKLHGWGQRFTYEDQDG--RISDLE 253 (296)
T ss_dssp HHHHHHTTCC---TTCCEEECCCCHHHHHHHHHHHHHHTCCEEEBTT--TEEEEEEEECSSSEEEEEEETTE--EEEEEE
T ss_pred HHHhhhcccc---cccccccccccHHHHHHHHHHHHhhCCcccccCc--ceeeeccccccCCceEEEEcCCC--ccCcCC
Confidence 9999999976 5778888877776655543 22345555553 3322 1122233444443332 222358
Q ss_pred cCCCChhHHHHHHHHHHHHHHHHcC------CCHHHHHHHhhc
Q 021862 215 MKVMGRHNYHNAAVAALSVLGLDIG------VDVEALNSTIEI 251 (306)
Q Consensus 215 ~~l~G~~~~~N~l~A~~~a~~~~lg------~~~~~i~~~l~~ 251 (306)
++++|+||++|+++|+ +++..++ ++.+.|++||++
T Consensus 254 l~L~G~hn~~Na~~Ai--a~~~~l~~~~~~~i~~e~I~~GL~~ 294 (296)
T d2gc6a2 254 VPLVGDYQQRNMAIAI--QTAKVYAKQTEWPLTPQNIRQGLAA 294 (296)
T ss_dssp ESCCSHHHHHHHHHHH--HHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHH--HHHHHHHhhcCCCCCHHHHHHHHHh
Confidence 8999999999999999 7777653 889999999986
No 8
>d1gg4a1 c.59.1.1 (A:313-447) UDP-murNac-tripeptide D-alanyl-D-alanine-adding enzyme MurF {Escherichia coli [TaxId: 562]}
Probab=98.85 E-value=1.1e-09 Score=84.55 Aligned_cols=48 Identities=21% Similarity=0.241 Sum_probs=42.2
Q ss_pred CCCeeeEEeeccCCEEEEEcCCCCcHHHHHHHHhccC--CCcEEEEECCCC
Q 021862 255 PPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK--GHKCVILLGGQA 303 (306)
Q Consensus 255 ~~gR~e~~~~~~~~~~ii~D~~~~n~~s~~~al~~~~--~~~~i~v~G~~~ 303 (306)
+|||++.+. ..++.+||||+||+||+||+.||+.+. ++|.++|+|+|.
T Consensus 1 vpgR~~~~~-~~~g~~iIdDsYNAnP~Sm~aAl~~l~~~~~~ki~vLGdM~ 50 (135)
T d1gg4a1 1 VPGRLFPIQ-LAENQLLLDDSYNANVGSMTAAVQVLAEMPGYRVLVVGDMA 50 (135)
T ss_dssp CTTSSEEEE-EETTEEEEECCSCCCHHHHHHHHHHHHHSSSEEEEEECCCC
T ss_pred CCCCCeEEE-cCCCcEEEecCCcCCHHHHHHHHHHhhccCCCceEEEcccc
Confidence 589999997 467899999999999999999999873 457899999985
No 9
>d2jfga2 c.59.1.1 (A:298-437) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}
Probab=98.78 E-value=4.2e-09 Score=81.69 Aligned_cols=51 Identities=41% Similarity=0.689 Sum_probs=47.0
Q ss_pred CCCCeeeEEeeccCCEEEEEcCCCCcHHHHHHHHhccC-CCcEEEEECCCCCC
Q 021862 254 TPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLK-GHKCVILLGGQAKE 305 (306)
Q Consensus 254 ~~~gR~e~~~~~~~~~~ii~D~~~~n~~s~~~al~~~~-~~~~i~v~G~~~~~ 305 (306)
++|+|||.+. ..+++.+|+|+.++||+|+..|+++++ ++++++|+||.+|+
T Consensus 1 GLpHR~e~v~-~~~gv~fiNDSKaTn~~a~~~Al~~~~~~~~iiLI~GG~~K~ 52 (140)
T d2jfga2 1 GLPHRFEVVL-EHNGVRWINDSKATNVGSTEAALNGLHVDGTLHLLLGGDGKS 52 (140)
T ss_dssp CCTTSSEEEE-EETTEEEEECTTCCSHHHHHHHHTTCCCSSCEEEEEESBCTT
T ss_pred CCCcceEEEE-EcCCEEEEECCccccHHHHHHHHhhhhccCceEEEeeccccc
Confidence 5899999998 688999999999999999999999996 57899999999986
No 10
>d1j6ua2 c.59.1.1 (A:296-446) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=98.26 E-value=5.3e-07 Score=70.35 Aligned_cols=47 Identities=17% Similarity=0.178 Sum_probs=39.0
Q ss_pred CCCCeeeEEee-ccCCEEEEEcCCCCcHHHHHHHHhcc----CCCcEEEEECC
Q 021862 254 TPPHRMQIVHR-DIQGVTWVDDSKATNLEATCTGLMDL----KGHKCVILLGG 301 (306)
Q Consensus 254 ~~~gR~e~~~~-~~~~~~ii~D~~~~n~~s~~~al~~~----~~~~~i~v~G~ 301 (306)
+++||||++.. ...+++||||| ||||.+++++|+++ +++++++||+.
T Consensus 1 Gv~rR~e~i~~~~~~~~~vidDy-AH~P~~i~a~l~a~r~~~~~~~ii~vf~p 52 (151)
T d1j6ua2 1 GVHRRFSIAFHDPETNIYVIDDY-AHTPDEIRNLLQTAKEVFENEKIVVIFQP 52 (151)
T ss_dssp CCTTSSEEEEEETTTTEEEEEEC-CCSHHHHHHHHHHHHHHCSSSEEEEEECC
T ss_pred CCCCCeEEEEecCCCCEEEEEEC-CCCHHHHHHHHHHhhhhhcccceeeeeec
Confidence 57999999842 45679999996 99999999999976 46788899865
No 11
>d1o5za1 c.59.1.2 (A:294-430) Folylpolyglutamate synthetase, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=98.02 E-value=3.6e-06 Score=64.22 Aligned_cols=46 Identities=20% Similarity=0.304 Sum_probs=37.5
Q ss_pred CeeeEEeeccCCEEEEEcCCCCcHHHHHHHHhcc----CCCcEEEEECCCCCC
Q 021862 257 HRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDL----KGHKCVILLGGQAKE 305 (306)
Q Consensus 257 gR~e~~~~~~~~~~ii~D~~~~n~~s~~~al~~~----~~~~~i~v~G~~~~~ 305 (306)
||||++. .++..+|.|+ +|||+|++.+++.+ +++++++|+|-+..+
T Consensus 1 GR~e~i~--~~~~~iilD~-AHN~~a~~~l~~~l~~~~~~~~~~~i~g~~~dk 50 (137)
T d1o5za1 1 GRFEILE--KNGKMYILDG-AHNPHGAESLVRSLKLYFNGEPLSLVIGILDDK 50 (137)
T ss_dssp TSSEEEE--ETTEEEEECC-CCSHHHHHHHHHHHHHHCTTCCEEEEECCCTTS
T ss_pred CCcEEEc--CCCCEEEEEC-CCCHHHHHHHHHHHHhhhccccceeeecccccc
Confidence 8999994 4567888886 99999999988876 467899999876554
No 12
>d2gc6a1 c.59.1.2 (A:297-425) Folylpolyglutamate synthetase, C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=97.96 E-value=2.4e-06 Score=64.43 Aligned_cols=46 Identities=20% Similarity=0.172 Sum_probs=34.9
Q ss_pred CCeeeEEeeccCCEEEEEcCCCCcHHHHHHHHhcc---CCCcEEEEECCCCCC
Q 021862 256 PHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDL---KGHKCVILLGGQAKE 305 (306)
Q Consensus 256 ~gR~e~~~~~~~~~~ii~D~~~~n~~s~~~al~~~---~~~~~i~v~G~~~~~ 305 (306)
|||||++. .+ ..++.|+ +|||+|++.+++.+ ..+++++|+|.+.++
T Consensus 2 PGR~e~i~--~~-~~iilD~-AHN~~~~~~l~~~l~~~~~~~~~~v~g~~~dK 50 (129)
T d2gc6a1 2 PARLEKIS--DT-PLIVIDG-AHNPDGINGLITALKQLFSQPITVIAGILADK 50 (129)
T ss_dssp TTSSEEEE--TT-TTEEECC-CCSHHHHHHHHHHHHHHCSSCCEEEECCC---
T ss_pred CCceEEec--CC-CcEEEEC-CCCHHHHHHHhhccccccchhhhhhccccCCc
Confidence 89999994 33 4677775 99999999988776 357889999987654
No 13
>d1p3da2 c.59.1.1 (A:322-473) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=97.86 E-value=6.4e-06 Score=63.50 Aligned_cols=47 Identities=13% Similarity=0.151 Sum_probs=37.1
Q ss_pred CCCCeeeEEee---ccCCEEEEEcCCCCcHHHHHHHHhccC----CCcEEEEECC
Q 021862 254 TPPHRMQIVHR---DIQGVTWVDDSKATNLEATCTGLMDLK----GHKCVILLGG 301 (306)
Q Consensus 254 ~~~gR~e~~~~---~~~~~~ii~D~~~~n~~s~~~al~~~~----~~~~i~v~G~ 301 (306)
++++|||+++. ..++++||||| ||+|.+++++|++++ ++++++++..
T Consensus 1 Gv~RRfe~~ge~~~~~~~~~VidDy-AHhPtaI~a~l~a~r~~~~~~~~~~~~~~ 54 (152)
T d1p3da2 1 GAGRRFDQLGEFIRPNGKVRLVDDY-GHHPTEVGVTIKAAREGWGDKRIVMIFQP 54 (152)
T ss_dssp CBTTSSEEEEEEEETTEEEEEEEEC-CCSHHHHHHHHHHHHHHHCSSCEEEEECC
T ss_pred CCCcceEEeceecccCCCcEEEEeC-CCCCHHHHHHHHHhhhhhhhhhhheeeec
Confidence 47899999962 25789999996 999999999999873 5566666543
No 14
>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=96.69 E-value=0.00041 Score=48.34 Aligned_cols=27 Identities=4% Similarity=-0.129 Sum_probs=25.1
Q ss_pred ecccccccccCchHHHHHHhcCCeeee
Q 021862 4 LWLFLLEFQLKATGLACLLQSGKRVMS 30 (306)
Q Consensus 4 ~~~~~~~~~~~~p~~~~~~~~~~~~l~ 30 (306)
++|+||+|+++||+++.|+++++|+++
T Consensus 63 ~vV~SsAI~~~npel~~A~~~gIpv~~ 89 (89)
T d1j6ua1 63 LVIKTPAVRDDNPEIVRARMERVPIEN 89 (89)
T ss_dssp EEEECTTCCTTCHHHHHHHHTTCCEEE
T ss_pred EEEEecCcCCCCHHHHHHHHcCCCccC
Confidence 578999999999999999999999874
No 15
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=95.61 E-value=0.0038 Score=49.77 Aligned_cols=31 Identities=29% Similarity=0.234 Sum_probs=28.1
Q ss_pred cEEEEecCC---ChhhHHHHHHHHHHhcCCCccc
Q 021862 44 KILAVTGTN---GKSTVVTFVGQMLNHLGIEAFV 74 (306)
Q Consensus 44 ~~I~VtGT~---GKTTt~~ll~~iL~~~g~~~~~ 74 (306)
|.+-||||. ||||++.-|.+.|.+.|++|..
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~ 35 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAG 35 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEE
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEE
Confidence 568888887 9999999999999999999964
No 16
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=92.70 E-value=0.053 Score=41.09 Aligned_cols=34 Identities=18% Similarity=0.115 Sum_probs=29.3
Q ss_pred CcEEEEecCC--ChhhHHHHHHHHHHhcCCCccccc
Q 021862 43 IKILAVTGTN--GKSTVVTFVGQMLNHLGIEAFVGG 76 (306)
Q Consensus 43 ~~~I~VtGT~--GKTTt~~ll~~iL~~~g~~~~~~g 76 (306)
+++|+|||.+ ||||+..-|..-|+..|+++++.-
T Consensus 1 Mkii~I~G~~gSGKTTli~~l~~~L~~~g~~v~vik 36 (165)
T d1xjca_ 1 MNVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVK 36 (165)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEEE
Confidence 4789999985 799999999999999999996543
No 17
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=92.51 E-value=0.05 Score=45.32 Aligned_cols=32 Identities=25% Similarity=0.361 Sum_probs=28.1
Q ss_pred CcEEEEe--cCCChhhHHHHHHHHHHhcCCCccc
Q 021862 43 IKILAVT--GTNGKSTVVTFVGQMLNHLGIEAFV 74 (306)
Q Consensus 43 ~~~I~Vt--GT~GKTTt~~ll~~iL~~~g~~~~~ 74 (306)
+++|+|+ |-.|||||+.-|+..|.+.|++|.+
T Consensus 2 Mr~IaisgKGGVGKTT~a~NLA~~LA~~G~rVLl 35 (289)
T d2afhe1 2 MRQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMI 35 (289)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEE
T ss_pred ccEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEE
Confidence 5678887 7889999999999999999999853
No 18
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=92.46 E-value=0.039 Score=46.34 Aligned_cols=33 Identities=33% Similarity=0.529 Sum_probs=27.8
Q ss_pred CCCcEEEEecCC--ChhhHHHHHHHHHHhcCCCcc
Q 021862 41 RSIKILAVTGTN--GKSTVVTFVGQMLNHLGIEAF 73 (306)
Q Consensus 41 ~~~~~I~VtGT~--GKTTt~~ll~~iL~~~g~~~~ 73 (306)
.+-++|+|||.. ||||++..+.++|...|.++.
T Consensus 2 ~k~pIIgIaG~SGSGKTTva~~l~~i~~~~~v~~~ 36 (288)
T d1a7ja_ 2 KKHPIISVTGSSGAGTSTVKHTFDQIFRREGVKAV 36 (288)
T ss_dssp TTSCEEEEESCC---CCTHHHHHHHHHHHHTCCEE
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHhhcCCCeE
Confidence 466899999985 799999999999999887753
No 19
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=91.57 E-value=0.071 Score=40.66 Aligned_cols=31 Identities=45% Similarity=0.553 Sum_probs=26.9
Q ss_pred CcEEEEecC--CChhhHHHHHHHHHHhcCCCcc
Q 021862 43 IKILAVTGT--NGKSTVVTFVGQMLNHLGIEAF 73 (306)
Q Consensus 43 ~~~I~VtGT--~GKTTt~~ll~~iL~~~g~~~~ 73 (306)
+++|.|+|. .||||++..|++.|...|+.+.
T Consensus 1 mkiivi~G~~GsGKTT~~~~La~~L~~~~~~~~ 33 (194)
T d1nksa_ 1 MKIGIVTGIPGVGKSTVLAKVKEILDNQGINNK 33 (194)
T ss_dssp CEEEEEEECTTSCHHHHHHHHHHHHHTTTCCEE
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 478889997 5899999999999999888763
No 20
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=91.18 E-value=0.099 Score=39.07 Aligned_cols=33 Identities=27% Similarity=0.248 Sum_probs=28.6
Q ss_pred CcEEEEecCC--ChhhHHHHHHHHHHhcCCCcccc
Q 021862 43 IKILAVTGTN--GKSTVVTFVGQMLNHLGIEAFVG 75 (306)
Q Consensus 43 ~~~I~VtGT~--GKTTt~~ll~~iL~~~g~~~~~~ 75 (306)
+|+|+|||.. ||||...-|..-|.+.|+++++.
T Consensus 2 ~Pvi~itG~~GSGKTTL~~~L~~~l~~~g~~v~v~ 36 (170)
T d1np6a_ 2 IPLLAFAAWSGTGKTTLLKKLIPALCARGIRPGLI 36 (170)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEe
Confidence 4799999985 79999999999999999998643
No 21
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=89.56 E-value=0.13 Score=40.75 Aligned_cols=32 Identities=25% Similarity=0.522 Sum_probs=28.2
Q ss_pred CcEEEEecC---CChhhHHHHHHHHHHhcCCCccc
Q 021862 43 IKILAVTGT---NGKSTVVTFVGQMLNHLGIEAFV 74 (306)
Q Consensus 43 ~~~I~VtGT---~GKTTt~~ll~~iL~~~g~~~~~ 74 (306)
+++|+|++. .||||++.-|+..|.+.|++|.+
T Consensus 1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~Vll 35 (232)
T d1hyqa_ 1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTI 35 (232)
T ss_dssp CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEE
Confidence 478888865 79999999999999999999864
No 22
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=88.75 E-value=0.16 Score=41.55 Aligned_cols=32 Identities=28% Similarity=0.376 Sum_probs=27.1
Q ss_pred CcEEEEec--CCChhhHHHHHHHHHHhcCCCccc
Q 021862 43 IKILAVTG--TNGKSTVVTFVGQMLNHLGIEAFV 74 (306)
Q Consensus 43 ~~~I~VtG--T~GKTTt~~ll~~iL~~~g~~~~~ 74 (306)
+++|+|+| =.||||++.-|+..|.+.|++|.+
T Consensus 1 mr~Iai~gKGGvGKTT~a~nLA~~LA~~G~rVll 34 (269)
T d1cp2a_ 1 MRQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMV 34 (269)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEE
T ss_pred CCEEEEECCCcCCHHHHHHHHHHHHHhCCCcEEE
Confidence 46788875 568999999999999999999853
No 23
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=88.67 E-value=0.45 Score=40.23 Aligned_cols=35 Identities=29% Similarity=0.370 Sum_probs=29.8
Q ss_pred CCCcEEEEecCC--ChhhHHHHHHHHHHhcCCCcccc
Q 021862 41 RSIKILAVTGTN--GKSTVVTFVGQMLNHLGIEAFVG 75 (306)
Q Consensus 41 ~~~~~I~VtGT~--GKTTt~~ll~~iL~~~g~~~~~~ 75 (306)
.+..+|+|||+- ||||+..-|...+...|+++++.
T Consensus 49 ~~~~~igitG~pGaGKSTli~~l~~~~~~~g~~vaVi 85 (323)
T d2qm8a1 49 GRAIRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVL 85 (323)
T ss_dssp CCSEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCceEEeeeCCCCCCHHHHHHHHHHHHhhcCCceeee
Confidence 467899999985 79999999988888899998643
No 24
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=87.37 E-value=0.33 Score=41.22 Aligned_cols=34 Identities=38% Similarity=0.465 Sum_probs=30.5
Q ss_pred CCCcEEEEecC--CChhhHHHHHHHHHHhcCCCccc
Q 021862 41 RSIKILAVTGT--NGKSTVVTFVGQMLNHLGIEAFV 74 (306)
Q Consensus 41 ~~~~~I~VtGT--~GKTTt~~ll~~iL~~~g~~~~~ 74 (306)
.+..+|+|||. .||||...-|...+.+.|.++++
T Consensus 52 ~~~~~IgitG~pGaGKSTLi~~l~~~~~~~g~~vav 87 (327)
T d2p67a1 52 GNTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAV 87 (327)
T ss_dssp SCSEEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCceEEEeeCCCCCCHHHHHHHHHHHHHhcCCceee
Confidence 56889999999 89999999999999999999864
No 25
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=87.12 E-value=0.26 Score=37.00 Aligned_cols=30 Identities=27% Similarity=0.368 Sum_probs=26.0
Q ss_pred cEEEEecCC--ChhhHHHHHHHHHHhcCCCcc
Q 021862 44 KILAVTGTN--GKSTVVTFVGQMLNHLGIEAF 73 (306)
Q Consensus 44 ~~I~VtGT~--GKTTt~~ll~~iL~~~g~~~~ 73 (306)
++|.|+|.. ||||.+..|+.-|...|.++.
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~~l~~~~~~~~ 33 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMDNLRKEGVNYK 33 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTTTCCCE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHcCCCeE
Confidence 688999874 799999999999999887764
No 26
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=86.37 E-value=0.28 Score=40.06 Aligned_cols=35 Identities=17% Similarity=0.357 Sum_probs=27.8
Q ss_pred CCcEEEEec--CCChhhHHHHHHHHHHhcCCCccccc
Q 021862 42 SIKILAVTG--TNGKSTVVTFVGQMLNHLGIEAFVGG 76 (306)
Q Consensus 42 ~~~~I~VtG--T~GKTTt~~ll~~iL~~~g~~~~~~g 76 (306)
..++|.++| =.|||||+..|+..|.+.|++|.+.-
T Consensus 19 ~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD 55 (279)
T d1ihua2 19 EHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTT 55 (279)
T ss_dssp SCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEe
Confidence 455666654 56899999999999999999986533
No 27
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=86.36 E-value=0.29 Score=38.63 Aligned_cols=31 Identities=23% Similarity=0.414 Sum_probs=26.7
Q ss_pred cEEEEecC---CChhhHHHHHHHHHHhcCCCccc
Q 021862 44 KILAVTGT---NGKSTVVTFVGQMLNHLGIEAFV 74 (306)
Q Consensus 44 ~~I~VtGT---~GKTTt~~ll~~iL~~~g~~~~~ 74 (306)
++|+|+|. .||||++.-|+..|.+.|++|.+
T Consensus 3 ~vIav~~~kGGvGKTtia~nLA~~la~~g~~Vll 36 (237)
T d1g3qa_ 3 RIISIVSGKGGTGKTTVTANLSVALGDRGRKVLA 36 (237)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEE
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEE
Confidence 57888855 68999999999999999999854
No 28
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=85.58 E-value=0.33 Score=40.83 Aligned_cols=33 Identities=21% Similarity=0.287 Sum_probs=26.2
Q ss_pred CCcEEEEecC--CChhhHHHHHHHHHHhc--CCCccc
Q 021862 42 SIKILAVTGT--NGKSTVVTFVGQMLNHL--GIEAFV 74 (306)
Q Consensus 42 ~~~~I~VtGT--~GKTTt~~ll~~iL~~~--g~~~~~ 74 (306)
...+|+|+|. .||||+++.|..+|... +.++.+
T Consensus 79 ~P~iIGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~ 115 (308)
T d1sq5a_ 79 IPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVEL 115 (308)
T ss_dssp CCEEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEE
T ss_pred CCEEEEEeCCCCCCCcHHHHHHHHHHhhhcCCCceEE
Confidence 4559999997 58999999999999864 455543
No 29
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=84.37 E-value=0.44 Score=36.13 Aligned_cols=32 Identities=28% Similarity=0.458 Sum_probs=26.9
Q ss_pred CCcEEEEecC--CChhhHHHHHHHHHHhcCCCcc
Q 021862 42 SIKILAVTGT--NGKSTVVTFVGQMLNHLGIEAF 73 (306)
Q Consensus 42 ~~~~I~VtGT--~GKTTt~~ll~~iL~~~g~~~~ 73 (306)
..-+|+|+|- .||||.+..|...|...+..+.
T Consensus 21 ~~~iIgI~G~~GSGKSTla~~L~~~l~~~~~~~~ 54 (198)
T d1rz3a_ 21 GRLVLGIDGLSRSGKTTLANQLSQTLREQGISVC 54 (198)
T ss_dssp SSEEEEEEECTTSSHHHHHHHHHHHHHHTTCCEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHhccccccce
Confidence 4448999986 5899999999999999887763
No 30
>d1aoea_ c.71.1.1 (A:) Dihydrofolate reductases, eukaryotic type {Yeast (Candida albicans) [TaxId: 5476]}
Probab=82.21 E-value=0.32 Score=37.95 Aligned_cols=51 Identities=20% Similarity=0.317 Sum_probs=32.0
Q ss_pred hcCCCCCCeeeEEeeccCCEEEEEcCCCCcHHHHHHHHhccCCCcEEEEECC
Q 021862 250 EILRTPPHRMQIVHRDIQGVTWVDDSKATNLEATCTGLMDLKGHKCVILLGG 301 (306)
Q Consensus 250 ~~~~~~~gR~e~~~~~~~~~~ii~D~~~~n~~s~~~al~~~~~~~~i~v~G~ 301 (306)
..++|+|+|..++-.+........+. ..-..|++++++.+++..-++|+||
T Consensus 64 ~~~rPLp~R~niVlSr~~~~~~~~~~-v~~~~s~~~al~~~~~~~~i~ViGG 114 (192)
T d1aoea_ 64 QKFRPLPDRLNIILSRSYENEIIDDN-IIHASSIESSLNLVSDVERVFIIGG 114 (192)
T ss_dssp GGGCSCTTSEEEEECTTCCCEEEETT-EEEESSHHHHHHTCCSEEEEEECCC
T ss_pred cccccccCceEEEEecccccccccce-eeeecCHHHHHHHhcCCcEEEEecc
Confidence 35789999999996433333333332 2223356677777765456888888
No 31
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=80.65 E-value=0.44 Score=38.94 Aligned_cols=36 Identities=19% Similarity=0.185 Sum_probs=29.6
Q ss_pred CCcEEEEec--CCChhhHHHHHHHHHHhcCCCcccccC
Q 021862 42 SIKILAVTG--TNGKSTVVTFVGQMLNHLGIEAFVGGN 77 (306)
Q Consensus 42 ~~~~I~VtG--T~GKTTt~~ll~~iL~~~g~~~~~~g~ 77 (306)
..++|.++| -.||||++..++..|.+.|++|.+...
T Consensus 7 ~p~~i~~sGKGGVGKTTvaa~lA~~lA~~G~rVLlvD~ 44 (296)
T d1ihua1 7 IPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVST 44 (296)
T ss_dssp CCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCeEEEEECCCcChHHHHHHHHHHHHHHCCCCEEEEeC
Confidence 345777776 578999999999999999999976554
No 32
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=78.15 E-value=0.72 Score=35.94 Aligned_cols=27 Identities=44% Similarity=0.732 Sum_probs=21.1
Q ss_pred Cc-EEEEecC--CChhhHHHHHHHHHHhcCCCcc
Q 021862 43 IK-ILAVTGT--NGKSTVVTFVGQMLNHLGIEAF 73 (306)
Q Consensus 43 ~~-~I~VtGT--~GKTTt~~ll~~iL~~~g~~~~ 73 (306)
++ +|+|||. .||||++.+ |.+.|+++.
T Consensus 2 mk~iIgitG~igSGKStv~~~----l~~~G~~vi 31 (208)
T d1vhta_ 2 LRYIVALTGGIGSGKSTVANA----FADLGINVI 31 (208)
T ss_dssp CCEEEEEECCTTSCHHHHHHH----HHHTTCEEE
T ss_pred CCEEEEEECCCcCCHHHHHHH----HHHCCCcEE
Confidence 45 9999997 589998875 577788763
No 33
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=78.06 E-value=1.1 Score=35.22 Aligned_cols=36 Identities=14% Similarity=0.197 Sum_probs=28.0
Q ss_pred CCcEEEEecCC--ChhhHHHHHHHHHHhcCCCcccccC
Q 021862 42 SIKILAVTGTN--GKSTVVTFVGQMLNHLGIEAFVGGN 77 (306)
Q Consensus 42 ~~~~I~VtGT~--GKTTt~~ll~~iL~~~g~~~~~~g~ 77 (306)
+..+|.+.|-+ |||||+.=|++.+...|.++++.+.
T Consensus 9 ~~~vi~lvGp~GvGKTTTiaKLA~~~~~~g~kV~lit~ 46 (207)
T d1ls1a2 9 DRNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAA 46 (207)
T ss_dssp SSEEEEEECCTTTTHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEec
Confidence 44566666654 7999999999999999999875544
No 34
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=77.56 E-value=0.99 Score=34.62 Aligned_cols=30 Identities=23% Similarity=0.381 Sum_probs=25.5
Q ss_pred EEEEecC--CChhhHHHHHHHHHHhcCCCccc
Q 021862 45 ILAVTGT--NGKSTVVTFVGQMLNHLGIEAFV 74 (306)
Q Consensus 45 ~I~VtGT--~GKTTt~~ll~~iL~~~g~~~~~ 74 (306)
.|+|.|. .||||.+..|..-|.+.|+++.+
T Consensus 2 lI~ieG~dGsGKST~~~~L~~~l~~~g~~v~~ 33 (208)
T d1gsia_ 2 LIAIEGVDGAGKRTLVEKLSGAFRAAGRSVAT 33 (208)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEE
Confidence 4777776 58999999999999999998743
No 35
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.35 E-value=0.75 Score=35.69 Aligned_cols=26 Identities=31% Similarity=0.455 Sum_probs=21.5
Q ss_pred cEEEEecC--CChhhHHHHHHHHHHhcC
Q 021862 44 KILAVTGT--NGKSTVVTFVGQMLNHLG 69 (306)
Q Consensus 44 ~~I~VtGT--~GKTTt~~ll~~iL~~~g 69 (306)
-+|+|||. .||||.++.|.+.|...+
T Consensus 3 ~iIgI~G~~gSGKSTla~~L~~~l~~~~ 30 (213)
T d1uj2a_ 3 FLIGVSGGTASGKSSVCAKIVQLLGQNE 30 (213)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHTTGGG
T ss_pred EEEEEECCCCCCHHHHHHHHHHHhchhc
Confidence 48999997 579999999998876554
No 36
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=76.73 E-value=1.3 Score=34.61 Aligned_cols=36 Identities=25% Similarity=0.482 Sum_probs=28.6
Q ss_pred CCcEEEEecCC--ChhhHHHHHHHHHHhcCCCcccccC
Q 021862 42 SIKILAVTGTN--GKSTVVTFVGQMLNHLGIEAFVGGN 77 (306)
Q Consensus 42 ~~~~I~VtGT~--GKTTt~~ll~~iL~~~g~~~~~~g~ 77 (306)
+.++|.+.|-+ |||||..=|+.-+...|.++.+.+.
T Consensus 5 ~~~vi~lvGptGvGKTTTiaKLA~~~~~~g~kV~lit~ 42 (207)
T d1okkd2 5 KGRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAG 42 (207)
T ss_dssp SSSEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEECC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEe
Confidence 45677777764 7999999999999999999876554
No 37
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=76.39 E-value=1.3 Score=34.84 Aligned_cols=37 Identities=22% Similarity=0.319 Sum_probs=27.9
Q ss_pred CCCcEEEEecCC--ChhhHHHHHHHHHHhcCCCcccccC
Q 021862 41 RSIKILAVTGTN--GKSTVVTFVGQMLNHLGIEAFVGGN 77 (306)
Q Consensus 41 ~~~~~I~VtGT~--GKTTt~~ll~~iL~~~g~~~~~~g~ 77 (306)
++..+|...|-+ |||||..=|++-+...|.++++.+.
T Consensus 9 ~~p~vi~lvGptGvGKTTTiAKLAa~~~~~~~kV~lit~ 47 (213)
T d1vmaa2 9 EPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAA 47 (213)
T ss_dssp SSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEee
Confidence 344566666654 7999999999999999999875543
No 38
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.04 E-value=0.98 Score=33.35 Aligned_cols=30 Identities=23% Similarity=0.404 Sum_probs=25.3
Q ss_pred cEEEEecCC--ChhhHHHHHHHHHHhcCCCcc
Q 021862 44 KILAVTGTN--GKSTVVTFVGQMLNHLGIEAF 73 (306)
Q Consensus 44 ~~I~VtGT~--GKTTt~~ll~~iL~~~g~~~~ 73 (306)
+.|.|||.. ||||++..+...|...|.++.
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l~~~~~~v~ 33 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVLKSSGVPVD 33 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHHHHTTCCCE
T ss_pred cEEEEECCCCCcHHHHHHHHHHHHHHCCCEEE
Confidence 457888876 699999999999999888774
No 39
>d2vo1a1 c.37.1.10 (A:1-273) CTP synthase PyrG, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.84 E-value=1.3 Score=36.03 Aligned_cols=31 Identities=32% Similarity=0.538 Sum_probs=28.1
Q ss_pred CcEEEEec----CCChhhHHHHHHHHHHhcCCCcc
Q 021862 43 IKILAVTG----TNGKSTVVTFVGQMLNHLGIEAF 73 (306)
Q Consensus 43 ~~~I~VtG----T~GKTTt~~ll~~iL~~~g~~~~ 73 (306)
+|.|.||| +-||+-|++-+..+|+..|++|.
T Consensus 1 mKyifVtGGV~S~lGKGi~~aSig~ll~~~g~~V~ 35 (273)
T d2vo1a1 1 MKYILVTGGVISGIGKGIIASSVGTILKSCGLHVT 35 (273)
T ss_dssp CEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEE
T ss_pred CeEEEEeCCcccccchHHHHHHHHHHHHhCCceeE
Confidence 46789999 68999999999999999999984
No 40
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=74.40 E-value=0.95 Score=35.76 Aligned_cols=27 Identities=22% Similarity=0.470 Sum_probs=20.3
Q ss_pred CcEEEEecC--CChhhHHHHHHHHHHhcCCCc
Q 021862 43 IKILAVTGT--NGKSTVVTFVGQMLNHLGIEA 72 (306)
Q Consensus 43 ~~~I~VtGT--~GKTTt~~ll~~iL~~~g~~~ 72 (306)
+++|+|||. .||||++.+|.. ..|+.+
T Consensus 1 M~iIgiTG~igSGKsTva~~l~e---~~g~~~ 29 (241)
T d1deka_ 1 MKLIFLSGVKRSGKDTTADFIMS---NYSAVK 29 (241)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHH---HSCEEE
T ss_pred CEEEEEECCCCCCHHHHHHHHHH---hCCCeE
Confidence 478999996 689999988743 346554
No 41
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=73.52 E-value=1.6 Score=32.01 Aligned_cols=30 Identities=23% Similarity=0.251 Sum_probs=24.5
Q ss_pred CCcEEEEecC--CChhhHHHHHHHHHHhcCCC
Q 021862 42 SIKILAVTGT--NGKSTVVTFVGQMLNHLGIE 71 (306)
Q Consensus 42 ~~~~I~VtGT--~GKTTt~~ll~~iL~~~g~~ 71 (306)
+..+|.+||. .||||++..|+.-|...+..
T Consensus 5 ~g~~I~l~G~~GsGKTTia~~La~~L~~~~~~ 36 (183)
T d1m8pa3 5 QGFTIFLTGYMNSGKDAIARALQVTLNQQGGR 36 (183)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHHCSS
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHhhcCCC
Confidence 4568888886 47999999999999876543
No 42
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=73.31 E-value=1.1 Score=34.63 Aligned_cols=26 Identities=31% Similarity=0.644 Sum_probs=19.7
Q ss_pred cEEEEecC--CChhhHHHHHHHHHHhcCCCcc
Q 021862 44 KILAVTGT--NGKSTVVTFVGQMLNHLGIEAF 73 (306)
Q Consensus 44 ~~I~VtGT--~GKTTt~~ll~~iL~~~g~~~~ 73 (306)
.+|||||. .||||.+. +|++.|..+.
T Consensus 3 ~iIgITG~igSGKStv~~----~l~~~G~~vi 30 (205)
T d1jjva_ 3 YIVGLTGGIGSGKTTIAN----LFTDLGVPLV 30 (205)
T ss_dssp EEEEEECSTTSCHHHHHH----HHHTTTCCEE
T ss_pred EEEEEECCCCCCHHHHHH----HHHHCCCeEE
Confidence 48999997 68999766 4567787663
No 43
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=72.98 E-value=1.9 Score=33.77 Aligned_cols=35 Identities=17% Similarity=0.365 Sum_probs=27.7
Q ss_pred CcEEEEecCC--ChhhHHHHHHHHHHhcCCCcccccC
Q 021862 43 IKILAVTGTN--GKSTVVTFVGQMLNHLGIEAFVGGN 77 (306)
Q Consensus 43 ~~~I~VtGT~--GKTTt~~ll~~iL~~~g~~~~~~g~ 77 (306)
..+|.+.|-+ |||||..=|++-+...|.++++.+.
T Consensus 9 p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~ 45 (211)
T d2qy9a2 9 PFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAG 45 (211)
T ss_dssp TEEEEEECCTTSCHHHHHHHHHHHHHTTTCCEEEECC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEec
Confidence 4566666654 7999999999999999999976554
No 44
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=70.30 E-value=2.1 Score=33.18 Aligned_cols=33 Identities=24% Similarity=0.181 Sum_probs=26.5
Q ss_pred CcEEEEecC--CChhhHHHHHHHHHHhcCCCcccc
Q 021862 43 IKILAVTGT--NGKSTVVTFVGQMLNHLGIEAFVG 75 (306)
Q Consensus 43 ~~~I~VtGT--~GKTTt~~ll~~iL~~~g~~~~~~ 75 (306)
...|+|.|- .||||.+..|..-|.+.|+++.+.
T Consensus 3 G~lI~ieG~dGsGKsT~~~~L~~~L~~~g~~v~~~ 37 (209)
T d1nn5a_ 3 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELL 37 (209)
T ss_dssp CCEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred eeEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEE
Confidence 456666664 689999999999999999988543
No 45
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=69.03 E-value=1.5 Score=32.07 Aligned_cols=25 Identities=24% Similarity=0.505 Sum_probs=20.8
Q ss_pred CcEEEEecCC--ChhhHHHHHHHHHHh
Q 021862 43 IKILAVTGTN--GKSTVVTFVGQMLNH 67 (306)
Q Consensus 43 ~~~I~VtGT~--GKTTt~~ll~~iL~~ 67 (306)
.++|.++|.. ||||++..|...|..
T Consensus 3 ~kiI~l~G~~GsGKsTva~~L~~~l~~ 29 (178)
T d1qhxa_ 3 TRMIILNGGSSAGKSGIVRCLQSVLPE 29 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHSSS
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHcCC
Confidence 4689999974 799999999888754
No 46
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=68.49 E-value=2.3 Score=33.31 Aligned_cols=35 Identities=17% Similarity=0.275 Sum_probs=23.4
Q ss_pred CcEEEEecCC--ChhhHHHHHHHHHHhcCCCcccccC
Q 021862 43 IKILAVTGTN--GKSTVVTFVGQMLNHLGIEAFVGGN 77 (306)
Q Consensus 43 ~~~I~VtGT~--GKTTt~~ll~~iL~~~g~~~~~~g~ 77 (306)
..+|...|-+ |||||..=|++-++..|.++++.+.
T Consensus 12 p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~ 48 (211)
T d1j8yf2 12 PYVIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGA 48 (211)
T ss_dssp SEEEEEECSCCC----HHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEe
Confidence 4466666654 7999999999999999999876554
No 47
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=67.69 E-value=1.8 Score=32.74 Aligned_cols=27 Identities=33% Similarity=0.562 Sum_probs=20.5
Q ss_pred CcEEEEecC--CChhhHHHHHHHHHHhcCCCcc
Q 021862 43 IKILAVTGT--NGKSTVVTFVGQMLNHLGIEAF 73 (306)
Q Consensus 43 ~~~I~VtGT--~GKTTt~~ll~~iL~~~g~~~~ 73 (306)
.-+|+|||. .||||.+.+| ++.|+.+.
T Consensus 3 p~IIgitG~~gSGKstva~~l----~~~g~~~~ 31 (191)
T d1uf9a_ 3 PIIIGITGNIGSGKSTVAALL----RSWGYPVL 31 (191)
T ss_dssp CEEEEEEECTTSCHHHHHHHH----HHTTCCEE
T ss_pred CEEEEEECCCCCCHHHHHHHH----HHCCCeEE
Confidence 458999997 5899988764 56787763
No 48
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=64.83 E-value=2 Score=31.49 Aligned_cols=23 Identities=30% Similarity=0.498 Sum_probs=19.1
Q ss_pred CcEEEEecCC--ChhhHHHHHHHHH
Q 021862 43 IKILAVTGTN--GKSTVVTFVGQML 65 (306)
Q Consensus 43 ~~~I~VtGT~--GKTTt~~ll~~iL 65 (306)
.+.|+|+|+. ||||.+..|+.-|
T Consensus 7 ~K~I~i~G~~GsGKTTla~~La~~~ 31 (192)
T d1lw7a2 7 AKTVAILGGESSGKSVLVNKLAAVF 31 (192)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHT
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHh
Confidence 4789999975 7999999988865
No 49
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=62.96 E-value=2 Score=38.70 Aligned_cols=30 Identities=20% Similarity=0.387 Sum_probs=22.9
Q ss_pred CCCcEEEEecCCChhhHH-HHHHHHHHhcCCC
Q 021862 41 RSIKILAVTGTNGKSTVV-TFVGQMLNHLGIE 71 (306)
Q Consensus 41 ~~~~~I~VtGT~GKTTt~-~ll~~iL~~~g~~ 71 (306)
.++-++|.+|| |||||. +-+..+|.+.+.+
T Consensus 25 ~~~lV~A~AGS-GKT~~lv~ri~~ll~~~~~~ 55 (623)
T g1qhh.1 25 GPLLIMAGAGS-GKTRVLTHRIAYLMAEKHVA 55 (623)
T ss_dssp SCEEEEECTTS-CHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEEeCch-HHHHHHHHHHHHHHHcCCCC
Confidence 46678999999 999987 4567788776654
No 50
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=62.54 E-value=4.6 Score=33.05 Aligned_cols=25 Identities=20% Similarity=0.166 Sum_probs=20.3
Q ss_pred CcEEEEecC--CChhhHHHHHHHHHHh
Q 021862 43 IKILAVTGT--NGKSTVVTFVGQMLNH 67 (306)
Q Consensus 43 ~~~I~VtGT--~GKTTt~~ll~~iL~~ 67 (306)
.-+|+|+|. .||||++..|...|.+
T Consensus 27 P~iIGi~G~qGSGKSTl~~~l~~~L~~ 53 (286)
T d1odfa_ 27 PLFIFFSGPQGSGKSFTSIQIYNHLME 53 (286)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHH
T ss_pred CEEEEeECCCCCCHHHHHHHHHHHHHH
Confidence 349999997 5899999988777755
No 51
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.91 E-value=5.1 Score=29.63 Aligned_cols=31 Identities=29% Similarity=0.277 Sum_probs=25.7
Q ss_pred CCcEEEEecCC--ChhhHHHHHHHHHHhcCCCc
Q 021862 42 SIKILAVTGTN--GKSTVVTFVGQMLNHLGIEA 72 (306)
Q Consensus 42 ~~~~I~VtGT~--GKTTt~~ll~~iL~~~g~~~ 72 (306)
+..+|.+||.. ||||++..|+..|...+...
T Consensus 18 ~g~vI~L~G~pGSGKTTiAk~La~~l~~~~~~~ 50 (195)
T d1x6va3 18 RGCTVWLTGLSGAGKTTVSMALEEYLVCHGIPC 50 (195)
T ss_dssp CCEEEEEESSCHHHHHHHHHHHHHHHHHTTCCE
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHhcCCCc
Confidence 45688899975 79999999999999877654
No 52
>d1s1ma2 c.37.1.10 (A:1-266) CTP synthase PyrG, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=58.80 E-value=4.4 Score=32.56 Aligned_cols=32 Identities=22% Similarity=0.364 Sum_probs=28.1
Q ss_pred CCcEEEEec----CCChhhHHHHHHHHHHhcCCCcc
Q 021862 42 SIKILAVTG----TNGKSTVVTFVGQMLNHLGIEAF 73 (306)
Q Consensus 42 ~~~~I~VtG----T~GKTTt~~ll~~iL~~~g~~~~ 73 (306)
+.|.|.||| +-||+-|++-+..+|+..|+++.
T Consensus 2 ~tkyifvtGGV~S~lGKGi~~aSig~llk~~g~~V~ 37 (266)
T d1s1ma2 2 TTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVT 37 (266)
T ss_dssp CCEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEE
T ss_pred CceEEEEeCCcccccchHHHHHHHHHHHHhCCceeE
Confidence 357788888 46999999999999999999984
No 53
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=56.99 E-value=2.6 Score=30.02 Aligned_cols=21 Identities=33% Similarity=0.404 Sum_probs=16.1
Q ss_pred EEEEecC--CChhhHHHHHHHHH
Q 021862 45 ILAVTGT--NGKSTVVTFVGQML 65 (306)
Q Consensus 45 ~I~VtGT--~GKTTt~~ll~~iL 65 (306)
.|.++|. .||||++.+|+.-|
T Consensus 4 ~I~l~G~~GsGKSTvak~La~~L 26 (169)
T d1kaga_ 4 NIFLVGPMGAGKSTIGRQLAQQL 26 (169)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHHh
Confidence 4556665 48999999998876
No 54
>d2g0ta1 c.37.1.10 (A:1-338) Hypothetical protein TM0796 {Thermotoga maritima [TaxId: 2336]}
Probab=56.65 E-value=4.7 Score=33.73 Aligned_cols=135 Identities=17% Similarity=0.132 Sum_probs=72.9
Q ss_pred cccCchHH-HHHHhcCCeeee--hHHHHH-----hhCCCCCcEEEEecC---CChhhHHHHHHHHHHhcCCCcccccC--
Q 021862 11 FQLKATGL-ACLLQSGKRVMS--ELDFAA-----QVIPRSIKILAVTGT---NGKSTVVTFVGQMLNHLGIEAFVGGN-- 77 (306)
Q Consensus 11 ~~~~~p~~-~~~~~~~~~~l~--~~~~~~-----~~~~~~~~~I~VtGT---~GKTTt~~ll~~iL~~~g~~~~~~g~-- 77 (306)
+-.+.|++ ..|.+.+..+.. +...-. +....+.++|+|.|| -||=||+..|...|++.|+++...++
T Consensus 117 ~L~ddpel~~~A~~~g~~i~DvR~p~~~l~v~~G~~~~~~~~rvl~vGTDca~GK~tTal~l~~~l~~~G~~a~fiaTGQ 196 (338)
T d2g0ta1 117 KISQQTEFLKIAHENGTRIIDIRIPPLELDVLRGGIYRKKIKVVGVFGTDCVVGKRTTAVQLWERALEKGIKAGFLATGQ 196 (338)
T ss_dssp --CCHHHHHHHHHHHTCCEEESSSCCSSCCCCCSGGGGCCSEEEEEEESSSSSSHHHHHHHHHHHHHHTTCCEEEEECSH
T ss_pred hhccCHHHHHHHHhCCCEEEEeeCCCCccchhhcchhccCCcEEEEeccCccccHHHHHHHHHHHHHhCCCCeeEEEcCC
Confidence 34556665 456666655542 211100 111136789999998 59999999999999999999853322
Q ss_pred --------CChhhhhhh-------hcc-ccCCCCCCCCcEEEEEeccccccc------CCc--eecccEEEEec-CChhh
Q 021862 78 --------LGNPLSEAA-------FHC-IALPSSKPKFQVAVVEVSSYQMEI------PNK--YFCPTVSVVLN-LTPDH 132 (306)
Q Consensus 78 --------~g~~~~~~~-------~~~-~~~~~~~~~~~~~V~E~~~~~~~~------~~~--~~~p~i~viTn-i~~dH 132 (306)
.|.++.... .+. +.... .++.|+.++|--..=.+. +.. --+||..|+.- -++.|
T Consensus 197 TGili~g~~Gv~~Dav~~DfvaGavE~~v~~~~-~~~~d~iiIEGQgSL~hP~~s~vtl~LL~Gs~Pd~lVL~H~p~r~~ 275 (338)
T d2g0ta1 197 TGILIGADAGYVIDAVPADFVSGVVEKAVLKLE-KTGKEIVFVEGQGALRHPAYGQVTLGLLYGSNPDVVFLVHDPSRDH 275 (338)
T ss_dssp HHHHTTCSEECCGGGSBGGGHHHHHHHHHHHHH-HTTCSEEEEECCSCTTCTTTHHHHHHHHHHHCCSEEEEECCTTCSS
T ss_pred eeEeeccccceecCcchhhhhHHHHHHHHhhhh-cCCCCEEEEcccccccccccccccHHHHhcCCCCEEEEeecCCccc
Confidence 233332111 111 11111 335789999965211111 111 14788887763 44444
Q ss_pred hhc------cCCHHHHHHHH
Q 021862 133 LER------HKTMKNYALTK 146 (306)
Q Consensus 133 ~~~------~gt~e~~~~~k 146 (306)
++- .+++++..+.-
T Consensus 276 ~~~~~~~~~iP~l~~~i~l~ 295 (338)
T d2g0ta1 276 FESFPEIPKKPDFEEERRLI 295 (338)
T ss_dssp CTTCTTSSCCCCHHHHHHHH
T ss_pred cccCcccCCCCCHHHHHHHH
Confidence 432 34666655543
No 55
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=56.52 E-value=5.3 Score=30.39 Aligned_cols=30 Identities=33% Similarity=0.551 Sum_probs=24.7
Q ss_pred cEEEEecC--CChhhHHHHHHHHHHhcCCCcc
Q 021862 44 KILAVTGT--NGKSTVVTFVGQMLNHLGIEAF 73 (306)
Q Consensus 44 ~~I~VtGT--~GKTTt~~ll~~iL~~~g~~~~ 73 (306)
+.|+|-|- .||||.+..|..-|.+.|+++.
T Consensus 3 kfIviEG~dGsGKsT~~~~L~~~L~~~g~~~~ 34 (210)
T d4tmka_ 3 KYIVIEGLEGAGKTTARNVVVETLEQLGIRDM 34 (210)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHHHTTCCCE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHhCCCCeE
Confidence 45677675 4899999999999999998753
No 56
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=56.49 E-value=1.9 Score=34.83 Aligned_cols=29 Identities=24% Similarity=0.487 Sum_probs=19.7
Q ss_pred CCcEEEEecCCChhhHH-HHHHHHHHhcCCC
Q 021862 42 SIKILAVTGTNGKSTVV-TFVGQMLNHLGIE 71 (306)
Q Consensus 42 ~~~~I~VtGT~GKTTt~-~ll~~iL~~~g~~ 71 (306)
..-++|..|| |||||. .-+.+++...+.+
T Consensus 16 ~~lI~g~aGT-GKTt~l~~rv~~ll~~~~~~ 45 (306)
T d1uaaa1 16 PCLVLAGAGS-GKTRVITNKIAHLIRGCGYQ 45 (306)
T ss_dssp EEEECCCTTS-CHHHHHHHHHHHHHHHHCCC
T ss_pred CEEEEeeCCc-cHHHHHHHHHHHHHHhcCCC
Confidence 3446677776 999874 4567778776654
No 57
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=55.77 E-value=3.6 Score=29.77 Aligned_cols=22 Identities=27% Similarity=0.277 Sum_probs=17.2
Q ss_pred cEEEEecCC--ChhhHHHHHHHHH
Q 021862 44 KILAVTGTN--GKSTVVTFVGQML 65 (306)
Q Consensus 44 ~~I~VtGT~--GKTTt~~ll~~iL 65 (306)
+.|.|+|.. ||||++..|+.-|
T Consensus 5 ~~I~i~G~pGsGKTTia~~La~~l 28 (173)
T d1rkba_ 5 PNILLTGTPGVGKTTLGKELASKS 28 (173)
T ss_dssp CCEEEECSTTSSHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHH
Confidence 457788874 7999999988655
No 58
>d1eg7a_ c.37.1.10 (A:) Formyltetrahydrofolate synthetase {Moorella thermoacetica [TaxId: 1525]}
Probab=54.96 E-value=5.6 Score=35.32 Aligned_cols=32 Identities=28% Similarity=0.348 Sum_probs=29.1
Q ss_pred CCcEEEEecCC------ChhhHHHHHHHHHHhcCCCcc
Q 021862 42 SIKILAVTGTN------GKSTVVTFVGQMLNHLGIEAF 73 (306)
Q Consensus 42 ~~~~I~VtGT~------GKTTt~~ll~~iL~~~g~~~~ 73 (306)
+.+.|.||+.+ |||||+-=|.+.|...|.++.
T Consensus 50 ~gklilVTaitPTp~GEGKtTttiGL~~aL~~lgk~~~ 87 (549)
T d1eg7a_ 50 DGKLILVTAITPTPAGEGKTTTSVGLTDALARLGKRVM 87 (549)
T ss_dssp CCEEEEEEESSCCTTCCCHHHHHHHHHHHHHHTTCCEE
T ss_pred CceEEEEEeCCCCCCCCCcceeHHhHHHHHHHhCCceE
Confidence 67899999986 999999999999999999974
No 59
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=52.17 E-value=4.5 Score=31.51 Aligned_cols=30 Identities=33% Similarity=0.535 Sum_probs=22.7
Q ss_pred CCcEEEEec--CCChhhHHHHHHHHHHh-cCCCccc
Q 021862 42 SIKILAVTG--TNGKSTVVTFVGQMLNH-LGIEAFV 74 (306)
Q Consensus 42 ~~~~I~VtG--T~GKTTt~~ll~~iL~~-~g~~~~~ 74 (306)
.+|++.||| -.|||| +|.++|++ .|.++++
T Consensus 2 ~iPv~iitGFLGaGKTT---ll~~lL~~~~~~riaV 34 (222)
T d1nija1 2 PIAVTLLTGFLGAGKTT---LLRHILNEQHGYKIAV 34 (222)
T ss_dssp CEEEEEEEESSSSSCHH---HHHHHHHSCCCCCEEE
T ss_pred CCCEEEEeeCCCCCHHH---HHHHHHhcCCCCcEEE
Confidence 568999999 578987 57888886 4677653
No 60
>d1vcoa2 c.37.1.10 (A:11-282) CTP synthase PyrG, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=51.06 E-value=7 Score=31.47 Aligned_cols=31 Identities=26% Similarity=0.370 Sum_probs=27.6
Q ss_pred CcEEEEecC----CChhhHHHHHHHHHHhcCCCcc
Q 021862 43 IKILAVTGT----NGKSTVVTFVGQMLNHLGIEAF 73 (306)
Q Consensus 43 ~~~I~VtGT----~GKTTt~~ll~~iL~~~g~~~~ 73 (306)
.|.|.|||. -||+-+++-+..+|+..|+++.
T Consensus 2 ~kyifvtGGV~S~lGKGi~~asig~ll~~~g~~v~ 36 (272)
T d1vcoa2 2 RKYVFITGGVVSSLGKGILTSSLGALLRARGYRVT 36 (272)
T ss_dssp CEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEE
T ss_pred ceEEEEeCCcccccccHHHHHHHHHHHHhCCCcee
Confidence 467888884 7999999999999999999984
No 61
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=49.53 E-value=3 Score=30.77 Aligned_cols=21 Identities=24% Similarity=0.322 Sum_probs=15.4
Q ss_pred EEEecC--CChhhHHHHHHHHHH
Q 021862 46 LAVTGT--NGKSTVVTFVGQMLN 66 (306)
Q Consensus 46 I~VtGT--~GKTTt~~ll~~iL~ 66 (306)
|.++|. .||||++..|+.-|.
T Consensus 5 Iil~G~~GsGKSTia~~LA~~Lg 27 (170)
T d1e6ca_ 5 IFMVGARGCGMTTVGRELARALG 27 (170)
T ss_dssp EEEESCTTSSHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 334454 489999999987774
No 62
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=48.38 E-value=5.9 Score=28.79 Aligned_cols=22 Identities=32% Similarity=0.513 Sum_probs=17.8
Q ss_pred EEEecCC--ChhhHHHHHHHHHHh
Q 021862 46 LAVTGTN--GKSTVVTFVGQMLNH 67 (306)
Q Consensus 46 I~VtGT~--GKTTt~~ll~~iL~~ 67 (306)
|+|||-+ ||||....+...|..
T Consensus 3 i~I~G~~G~GKSTLl~~i~~~l~~ 26 (178)
T d1ye8a1 3 IIITGEPGVGKTTLVKKIVERLGK 26 (178)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHGG
T ss_pred EEEECCCCcHHHHHHHHHHhcCCC
Confidence 8899987 599988888777765
No 63
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=46.99 E-value=5.7 Score=28.90 Aligned_cols=21 Identities=29% Similarity=0.455 Sum_probs=16.1
Q ss_pred EEEecC--CChhhHHHHHHHHHH
Q 021862 46 LAVTGT--NGKSTVVTFVGQMLN 66 (306)
Q Consensus 46 I~VtGT--~GKTTt~~ll~~iL~ 66 (306)
|.++|. .||||++.+|++-|.
T Consensus 3 I~liG~~GsGKsTi~k~La~~l~ 25 (161)
T d1viaa_ 3 IVFIGFMGSGKSTLARALAKDLD 25 (161)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 444454 589999999998883
No 64
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.59 E-value=1.3 Score=34.65 Aligned_cols=30 Identities=30% Similarity=0.488 Sum_probs=24.2
Q ss_pred CCcEEEEecC--CChhhHHHHHHHHHHhcCCC
Q 021862 42 SIKILAVTGT--NGKSTVVTFVGQMLNHLGIE 71 (306)
Q Consensus 42 ~~~~I~VtGT--~GKTTt~~ll~~iL~~~g~~ 71 (306)
+++.|+|-|. .||||.+.+|++-|...+..
T Consensus 1 ~~k~I~ieG~dGsGKST~~~~L~~~l~~~~~~ 32 (241)
T d1p5zb_ 1 RIKKISIEGNIAAGKSTFVNILKQLCEDWEVV 32 (241)
T ss_dssp CCEEEEEECSTTSSHHHHHTTTGGGCTTEEEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHhcCCCe
Confidence 4678999985 68999999999988766543
No 65
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=46.40 E-value=8.1 Score=27.69 Aligned_cols=25 Identities=32% Similarity=0.464 Sum_probs=19.8
Q ss_pred CCcEEEEecC--CChhhHHHHHHHHHH
Q 021862 42 SIKILAVTGT--NGKSTVVTFVGQMLN 66 (306)
Q Consensus 42 ~~~~I~VtGT--~GKTTt~~ll~~iL~ 66 (306)
+.++|.++|- .||||.+..|+.-|.
T Consensus 5 ~~~iivl~G~~GsGKsT~a~~La~~l~ 31 (171)
T d1knqa_ 5 DHHIYVLMGVSGSGKSAVASEVAHQLH 31 (171)
T ss_dssp TSEEEEEECSTTSCHHHHHHHHHHHHT
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 4567777876 489999999998774
No 66
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=45.93 E-value=5.7 Score=29.75 Aligned_cols=29 Identities=21% Similarity=0.464 Sum_probs=23.5
Q ss_pred EEEEecC--CChhhHHHHHHHHHHhcCCCcc
Q 021862 45 ILAVTGT--NGKSTVVTFVGQMLNHLGIEAF 73 (306)
Q Consensus 45 ~I~VtGT--~GKTTt~~ll~~iL~~~g~~~~ 73 (306)
+|.++|- .||||++..|+.-|...|.++.
T Consensus 4 li~l~GlpgsGKSTla~~L~~~l~~~~~~~~ 34 (213)
T d1bifa1 4 LIVMVGLPARGKTYISKKLTRYLNFIGVPTR 34 (213)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHTTCCEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhcCCCCe
Confidence 4666664 5999999999999998887763
No 67
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=45.63 E-value=8 Score=29.30 Aligned_cols=30 Identities=30% Similarity=0.501 Sum_probs=22.1
Q ss_pred cEEEEecC--CChhhHHHHHHHHHHhcCCCccccc
Q 021862 44 KILAVTGT--NGKSTVVTFVGQMLNHLGIEAFVGG 76 (306)
Q Consensus 44 ~~I~VtGT--~GKTTt~~ll~~iL~~~g~~~~~~g 76 (306)
-+|+|.|. .||||.+.+|+.=| |+.+...|
T Consensus 4 i~IaIdGp~GsGKgT~ak~La~~l---g~~~istG 35 (223)
T d1q3ta_ 4 IQIAIDGPASSGKSTVAKIIAKDF---GFTYLDTG 35 (223)
T ss_dssp CEEEEECSSCSSHHHHHHHHHHHH---CCEEEEHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHh---CCcEECHH
Confidence 36889897 78999999998866 45443334
No 68
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=44.64 E-value=11 Score=29.28 Aligned_cols=29 Identities=31% Similarity=0.462 Sum_probs=21.5
Q ss_pred cEEEEecCC--ChhhHHHHH--HHHHHhcCCCc
Q 021862 44 KILAVTGTN--GKSTVVTFV--GQMLNHLGIEA 72 (306)
Q Consensus 44 ~~I~VtGT~--GKTTt~~ll--~~iL~~~g~~~ 72 (306)
+++.|||.| ||||...-+ ..+|.+.|.-+
T Consensus 36 ~~~iiTGpN~~GKSt~lk~i~l~~ilAq~G~~v 68 (224)
T d1ewqa2 36 ELVLITGPNMAGKSTFLRQTALIALLAQVGSFV 68 (224)
T ss_dssp CEEEEESCSSSSHHHHHHHHHHHHHHHTTTCCB
T ss_pred cEEEEECCCccccchhhhhhHHHHHHHhcccee
Confidence 478999999 999987643 45666766544
No 69
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=43.05 E-value=6.6 Score=28.04 Aligned_cols=22 Identities=36% Similarity=0.483 Sum_probs=17.2
Q ss_pred cEEEEecC--CChhhHHHHHHHHH
Q 021862 44 KILAVTGT--NGKSTVVTFVGQML 65 (306)
Q Consensus 44 ~~I~VtGT--~GKTTt~~ll~~iL 65 (306)
++|.|+|- .||||++..|+.-|
T Consensus 3 klI~i~G~~GsGKTTva~~L~~~~ 26 (176)
T d2bdta1 3 KLYIITGPAGVGKSTTCKRLAAQL 26 (176)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHHHHc
Confidence 56888886 48999998887654
No 70
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=38.93 E-value=8.9 Score=30.88 Aligned_cols=29 Identities=24% Similarity=0.432 Sum_probs=18.6
Q ss_pred CCCcEEEEecCCChhhHHH-HHHHHHHhcCC
Q 021862 41 RSIKILAVTGTNGKSTVVT-FVGQMLNHLGI 70 (306)
Q Consensus 41 ~~~~~I~VtGT~GKTTt~~-ll~~iL~~~g~ 70 (306)
...-++|.+|| |||||.- -+.++|...+.
T Consensus 25 g~~lV~g~aGS-GKTt~l~~ri~~ll~~~~~ 54 (318)
T d1pjra1 25 GPLLIMAGAGS-GKTRVLTHRIAYLMAEKHV 54 (318)
T ss_dssp SCEEEEECTTS-CHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEecCCc-cHHHHHHHHHHHHHHcCCC
Confidence 35567888876 9998753 34556665443
No 71
>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}
Probab=38.17 E-value=9.6 Score=31.08 Aligned_cols=44 Identities=20% Similarity=0.222 Sum_probs=30.8
Q ss_pred eehHHHHHhhCCCCCcEEEEecCCChhhHHHHHHHHHHhcCCCccc
Q 021862 29 MSELDFAAQVIPRSIKILAVTGTNGKSTVVTFVGQMLNHLGIEAFV 74 (306)
Q Consensus 29 l~~~~~~~~~~~~~~~~I~VtGT~GKTTt~~ll~~iL~~~g~~~~~ 74 (306)
|.|...++..++.+.++|.|||.+|= ..+-|...|.+.|+++..
T Consensus 2 ~~~~~~~~~~~~~~~k~iLVTG~tGf--IGs~lv~~L~~~g~~V~~ 45 (341)
T d1sb8a_ 2 MSRYEELRKELPAQPKVWLITGVAGF--IGSNLLETLLKLDQKVVG 45 (341)
T ss_dssp CCHHHHHHHHHHHSCCEEEEETTTSH--HHHHHHHHHHHTTCEEEE
T ss_pred CchHHHHHHhCCCCCCEEEEecCCCH--HHHHHHHHHHHCcCEEEE
Confidence 56777777666456789999999984 444445556667888743
No 72
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=37.80 E-value=8.8 Score=29.42 Aligned_cols=30 Identities=20% Similarity=0.192 Sum_probs=23.8
Q ss_pred CCcEEEEecC--CChhhHHHHHHHHHHhcCCC
Q 021862 42 SIKILAVTGT--NGKSTVVTFVGQMLNHLGIE 71 (306)
Q Consensus 42 ~~~~I~VtGT--~GKTTt~~ll~~iL~~~g~~ 71 (306)
+.+.|+|-|. .||||.+.+|+.-|+..+..
T Consensus 2 kGk~I~iEG~DGsGKST~~~~L~~~L~~~~~~ 33 (214)
T d1tmka_ 2 RGKLILIEGLDRTGKTTQCNILYKKLQPNCKL 33 (214)
T ss_dssp CCCEEEEEESTTSSHHHHHHHHHHHTTTSEEE
T ss_pred CeEEEEEECCCCCcHHHHHHHHHHHHHhCCEE
Confidence 4567888885 68999999999999876543
No 73
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=36.44 E-value=23 Score=26.78 Aligned_cols=32 Identities=25% Similarity=0.235 Sum_probs=24.3
Q ss_pred CCCcEEEEecCC--ChhhHHHHHHHHHH-hcCCCc
Q 021862 41 RSIKILAVTGTN--GKSTVVTFVGQMLN-HLGIEA 72 (306)
Q Consensus 41 ~~~~~I~VtGT~--GKTTt~~ll~~iL~-~~g~~~ 72 (306)
++..+|-+||-. ||||.+..|..-|. ..+..+
T Consensus 22 ~kg~vIwltGlsGsGKTTia~~L~~~l~~~~~~~~ 56 (208)
T d1m7ga_ 22 QRGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHA 56 (208)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCE
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHhcCceE
Confidence 577899999965 79999988876664 455544
No 74
>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=36.16 E-value=14 Score=27.64 Aligned_cols=29 Identities=14% Similarity=0.189 Sum_probs=21.0
Q ss_pred CCcEEEEecCCChhhHHHHHHHHHHhcCCCc
Q 021862 42 SIKILAVTGTNGKSTVVTFVGQMLNHLGIEA 72 (306)
Q Consensus 42 ~~~~I~VtGT~GKTTt~~ll~~iL~~~g~~~ 72 (306)
++++|.|||..|.-- .+++.+++ +.|+++
T Consensus 2 ~~~tVlVtGatG~iG-~~l~~~Ll-~~g~~v 30 (252)
T d2q46a1 2 NLPTVLVTGASGRTG-QIVYKKLK-EGSDKF 30 (252)
T ss_dssp SCCEEEEESTTSTTH-HHHHHHHH-HTTTTC
T ss_pred CCCEEEEECCccHHH-HHHHHHHH-HCCCcE
Confidence 678999999999765 45555555 556664
No 75
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=35.71 E-value=5 Score=30.01 Aligned_cols=25 Identities=20% Similarity=0.304 Sum_probs=19.5
Q ss_pred CcEEEEecC--CChhhHHHHHHHHHHh
Q 021862 43 IKILAVTGT--NGKSTVVTFVGQMLNH 67 (306)
Q Consensus 43 ~~~I~VtGT--~GKTTt~~ll~~iL~~ 67 (306)
..+|+|.|. .||||.+..|+.-|..
T Consensus 9 p~~I~ieG~~GsGKTTl~~~L~~~l~~ 35 (197)
T d2vp4a1 9 PFTVLIEGNIGSGKTTYLNHFEKYKND 35 (197)
T ss_dssp CEEEEEECSTTSCHHHHHHTTGGGTTT
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 348999996 6899999988766543
No 76
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=35.67 E-value=13 Score=26.55 Aligned_cols=23 Identities=26% Similarity=0.495 Sum_probs=17.9
Q ss_pred cEEEEecCC--ChhhHHHHHHHHHH
Q 021862 44 KILAVTGTN--GKSTVVTFVGQMLN 66 (306)
Q Consensus 44 ~~I~VtGT~--GKTTt~~ll~~iL~ 66 (306)
..|.|+|.. ||||.+..|+.-|.
T Consensus 6 ~~I~i~G~~GsGKTT~~~~La~~l~ 30 (174)
T d1y63a_ 6 INILITGTPGTGKTSMAEMIAAELD 30 (174)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHST
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHhC
Confidence 468888874 79999999887653
No 77
>d1j3ka_ c.71.1.1 (A:) Bifunctional enzyme dihydrofolate reductase-thymidylate synthase, DFR domain {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=35.34 E-value=9.2 Score=30.09 Aligned_cols=50 Identities=18% Similarity=0.178 Sum_probs=26.4
Q ss_pred cCCCCCCeeeEEeeccCCEEEEE-cC-CCCcHHHHHHHHhccCCCcEEEEECC
Q 021862 251 ILRTPPHRMQIVHRDIQGVTWVD-DS-KATNLEATCTGLMDLKGHKCVILLGG 301 (306)
Q Consensus 251 ~~~~~~gR~e~~~~~~~~~~ii~-D~-~~~n~~s~~~al~~~~~~~~i~v~G~ 301 (306)
.++|+|+|..++-.+.......+ +. ..++++.+.+.++..+.+ -++|+||
T Consensus 115 ~~rPLp~R~nIVLSr~~~~~~~~~~v~v~~sl~~ai~~~~~~~~~-~IfIIGG 166 (231)
T d1j3ka_ 115 KFKPLSNRINVILSRTLKKEDFDEDVYIINKVEDLIVLLGKLNYY-KCFILGG 166 (231)
T ss_dssp GGCSCTTSEEEEECSSCCGGGCCSSCEEESSHHHHHHHHHHSCCS-CEEECCC
T ss_pred cccccCCCceEEEecCccccccCCceEEehhHHHHHHHHhhcCCC-ceEEECh
Confidence 46899999998853211000000 00 124566555555554433 4688887
No 78
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=34.53 E-value=12 Score=26.76 Aligned_cols=22 Identities=32% Similarity=0.490 Sum_probs=16.1
Q ss_pred CCcEEEEecC--CChhhHHHHHHH
Q 021862 42 SIKILAVTGT--NGKSTVVTFVGQ 63 (306)
Q Consensus 42 ~~~~I~VtGT--~GKTTt~~ll~~ 63 (306)
..++|.++|- .||||++..|+.
T Consensus 3 ~g~iI~l~G~~GsGKSTia~~La~ 26 (176)
T d1zp6a1 3 GGNILLLSGHPGSGKSTIAEALAN 26 (176)
T ss_dssp TTEEEEEEECTTSCHHHHHHHHHT
T ss_pred CCeEEEEECCCCCCHHHHHHHHHH
Confidence 3467888885 489999887754
No 79
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.91 E-value=9.4 Score=29.37 Aligned_cols=28 Identities=25% Similarity=0.393 Sum_probs=22.2
Q ss_pred CcEEEEecC--CChhhHHHHHHHHHHhcCC
Q 021862 43 IKILAVTGT--NGKSTVVTFVGQMLNHLGI 70 (306)
Q Consensus 43 ~~~I~VtGT--~GKTTt~~ll~~iL~~~g~ 70 (306)
.+.|+|-|. .||||.+.+|+.-|...+.
T Consensus 2 pk~IviEG~~GsGKST~~~~L~~~l~~~~i 31 (241)
T d2ocpa1 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWHV 31 (241)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHCTTSEE
T ss_pred CeEEEEECCCCCcHHHHHHHHHHHHhhcCC
Confidence 367888885 6899999999988876543
No 80
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=33.68 E-value=14 Score=27.43 Aligned_cols=25 Identities=20% Similarity=0.252 Sum_probs=20.8
Q ss_pred CCCcEEEEecC--CChhhHHHHHHHHH
Q 021862 41 RSIKILAVTGT--NGKSTVVTFVGQML 65 (306)
Q Consensus 41 ~~~~~I~VtGT--~GKTTt~~ll~~iL 65 (306)
.+.++|.|.|- .||||.+.+|++-|
T Consensus 6 ~~~~iI~i~GppGSGKsT~a~~La~~~ 32 (196)
T d1ukza_ 6 DQVSVIFVLGGPGAGKGTQCEKLVKDY 32 (196)
T ss_dssp TTCEEEEEECSTTSSHHHHHHHHHHHS
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHHh
Confidence 46789999996 58999999997755
No 81
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=33.61 E-value=16 Score=26.92 Aligned_cols=28 Identities=21% Similarity=0.246 Sum_probs=21.1
Q ss_pred CCcEEEEecC--CChhhHHHHHHHHHHhcCCCc
Q 021862 42 SIKILAVTGT--NGKSTVVTFVGQMLNHLGIEA 72 (306)
Q Consensus 42 ~~~~I~VtGT--~GKTTt~~ll~~iL~~~g~~~ 72 (306)
+.++|.|.|. .||||.+..|++-+ |+.+
T Consensus 5 kp~iI~i~G~pGSGKsT~a~~La~~~---g~~~ 34 (194)
T d1qf9a_ 5 KPNVVFVLGGPGSGKGTQCANIVRDF---GWVH 34 (194)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHHHH---CCEE
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHH---CCce
Confidence 5568899887 47999999887654 5554
No 82
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=32.42 E-value=14 Score=27.61 Aligned_cols=32 Identities=19% Similarity=0.378 Sum_probs=23.4
Q ss_pred CcEEEEecC--CChhhHHHHHHHHHHhcCCCcccccC
Q 021862 43 IKILAVTGT--NGKSTVVTFVGQMLNHLGIEAFVGGN 77 (306)
Q Consensus 43 ~~~I~VtGT--~GKTTt~~ll~~iL~~~g~~~~~~g~ 77 (306)
.|+|+|-|- .||||.+..|+.=| |+.+...|.
T Consensus 3 ~piI~I~GppGSGKgT~ak~La~~~---gl~~iStGd 36 (225)
T d1ckea_ 3 APVITIDGPSGAGKGTLCKAMAEAL---QWHLLDSGA 36 (225)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHHHH---TCEEEEHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHh---CCcEECHHH
Confidence 379999886 58999999988766 555544443
No 83
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=31.38 E-value=18 Score=27.40 Aligned_cols=28 Identities=29% Similarity=0.408 Sum_probs=19.5
Q ss_pred EEEEecC--CChhhHHHHHHHHHHhcCCCcc
Q 021862 45 ILAVTGT--NGKSTVVTFVGQMLNHLGIEAF 73 (306)
Q Consensus 45 ~I~VtGT--~GKTTt~~ll~~iL~~~g~~~~ 73 (306)
+|.|+|- .||||...-|.+-+. .+++++
T Consensus 2 vi~v~G~~GsGKTTLl~~ll~~~~-~~~~~~ 31 (244)
T d1yrba1 2 IVVFVGTAGSGKTTLTGEFGRYLE-DNYKVA 31 (244)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHT-TTSCEE
T ss_pred EEEEEcCCCCcHHHHHHHHHHHHh-hCCeEE
Confidence 6889996 789998766655554 355554
No 84
>d1mw7a_ e.39.1.1 (A:) Hypothetical protein HP0162 {Helicobacter pylori [TaxId: 210]}
Probab=29.87 E-value=55 Score=24.93 Aligned_cols=58 Identities=12% Similarity=0.056 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHhhcCCCCCC-----eeeEEeeccCCEEEEEcCCCCcHHHHHHHHh
Q 021862 227 AVAALSVLGLDIGVDVEALNSTIEILRTPPH-----RMQIVHRDIQGVTWVDDSKATNLEATCTGLM 288 (306)
Q Consensus 227 l~A~~~a~~~~lg~~~~~i~~~l~~~~~~~g-----R~e~~~~~~~~~~ii~D~~~~n~~s~~~al~ 288 (306)
..|+ .-|...++|.+.|.++|++..+-.+ |.|-. ..+|+-||.++.-.|..-...-++
T Consensus 28 ~~ai--~~Ak~~nmPkd~IerAIkk~~~~~~~~~e~~YEg~--gp~gvaiiVe~lTDN~nRt~~~vr 90 (220)
T d1mw7a_ 28 RTAI--LNAKAQNMPKDNIDAAIKRASSKEGNLSEITYEGK--ANFGVLIIMECMTDNPTRTIANLK 90 (220)
T ss_dssp HHHH--HHHHHHTCCHHHHHHHHHHTTSTTCCCEEEEEEEE--ETTTEEEEEEEEESCHHHHHHHHH
T ss_pred HHHH--HHHHHhCCCccHHHHHHHhhcccCCCceEEEEEEe--cCCceEEEEEEecCchhhHHHHHH
Confidence 4455 7788889999999999988765444 44444 467888888874445444333333
No 85
>d3dfra_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type {Lactobacillus casei [TaxId: 1582]}
Probab=29.11 E-value=14 Score=27.06 Aligned_cols=51 Identities=16% Similarity=0.176 Sum_probs=26.0
Q ss_pred HhhcCCCCCCeeeEEeeccCCEEEEEcC-CCCcHHHHHHHHhccCCCcEEEEECC
Q 021862 248 TIEILRTPPHRMQIVHRDIQGVTWVDDS-KATNLEATCTGLMDLKGHKCVILLGG 301 (306)
Q Consensus 248 ~l~~~~~~~gR~e~~~~~~~~~~ii~D~-~~~n~~s~~~al~~~~~~~~i~v~G~ 301 (306)
.+.. +|+|+|..++-. .+.-.-.++. ...+++.+...++...++ -++|+||
T Consensus 48 slp~-~pl~~R~~iVls-~~~~~~~~~~~~~~s~~~~i~~~~~~~~~-~i~IiGG 99 (162)
T d3dfra_ 48 SFPK-RPLPERTNVVLT-HQEDYQAQGAVVVHDVAAVFAYAKQHLDQ-ELVIAGG 99 (162)
T ss_dssp HSSS-SSCTTSEEEEEC-SCTTCCCTTSEEESSHHHHHHHHHHCCSS-CEEECCC
T ss_pred hhcc-cccCCceEEEec-ccccccccCceecchHHHHHHHHhhcccc-ceeecch
Confidence 4443 589999999853 2211101110 122455555555443343 4778887
No 86
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=29.00 E-value=15 Score=29.56 Aligned_cols=20 Identities=30% Similarity=0.579 Sum_probs=15.4
Q ss_pred CCcEEEEec--CCChhhHHHHH
Q 021862 42 SIKILAVTG--TNGKSTVVTFV 61 (306)
Q Consensus 42 ~~~~I~VtG--T~GKTTt~~ll 61 (306)
..|.|+|.| +.||||....|
T Consensus 23 ~lP~ivVvG~~ssGKSSliNaL 44 (306)
T d1jwyb_ 23 DLPQIVVVGSQSSGKSSVLENI 44 (306)
T ss_dssp CCCEEEEEECSSSSHHHHHHHH
T ss_pred CCCeEEEEeCCCCCHHHHHHHH
Confidence 467899999 58999876554
No 87
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=28.54 E-value=13 Score=26.85 Aligned_cols=21 Identities=29% Similarity=0.403 Sum_probs=15.7
Q ss_pred EEEecC--CChhhHHHHHHHHHH
Q 021862 46 LAVTGT--NGKSTVVTFVGQMLN 66 (306)
Q Consensus 46 I~VtGT--~GKTTt~~ll~~iL~ 66 (306)
|.++|. .||||++.+|+.-|.
T Consensus 4 IvliG~~G~GKSTig~~La~~l~ 26 (165)
T d2iyva1 4 AVLVGLPGSGKSTIGRRLAKALG 26 (165)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 334465 489999999998883
No 88
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=27.14 E-value=25 Score=27.29 Aligned_cols=31 Identities=29% Similarity=0.462 Sum_probs=22.7
Q ss_pred CCcEEEEecCC--ChhhHHHHHH--HHHHhcCCCc
Q 021862 42 SIKILAVTGTN--GKSTVVTFVG--QMLNHLGIEA 72 (306)
Q Consensus 42 ~~~~I~VtGT~--GKTTt~~ll~--~iL~~~g~~~ 72 (306)
..+++.|||.| ||||..+.+. .+|.+.|.-|
T Consensus 40 ~~~~~iiTGpN~~GKSt~lk~i~l~~~laq~G~~V 74 (234)
T d1wb9a2 40 QRRMLIITGPNMGGKSTYMRQTALIALMAYIGSYV 74 (234)
T ss_dssp SSCEEEEECCTTSSHHHHHHHHHHHHHHHTTTCCB
T ss_pred CceEEEEeccCchhhHHHHHHHHHHHHHHHcCCeE
Confidence 44689999999 9999887654 4555666544
No 89
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=26.98 E-value=19 Score=27.54 Aligned_cols=20 Identities=30% Similarity=0.516 Sum_probs=16.3
Q ss_pred CCcEEEEecCC--ChhhHHHHH
Q 021862 42 SIKILAVTGTN--GKSTVVTFV 61 (306)
Q Consensus 42 ~~~~I~VtGT~--GKTTt~~ll 61 (306)
+.|+|+|.|-. ||||...-|
T Consensus 4 r~p~IaIiGh~d~GKSTL~~~L 25 (227)
T d1g7sa4 4 RSPIVSVLGHVDHGKTTLLDHI 25 (227)
T ss_dssp CCCEEEEECSTTSSHHHHHHHH
T ss_pred CCCEEEEEeCCCccHHHHHHHH
Confidence 45789999988 999987654
No 90
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=26.77 E-value=20 Score=27.12 Aligned_cols=26 Identities=23% Similarity=0.367 Sum_probs=20.4
Q ss_pred CCcEEEEecCCC--hhhHHHHHHHHHHh
Q 021862 42 SIKILAVTGTNG--KSTVVTFVGQMLNH 67 (306)
Q Consensus 42 ~~~~I~VtGT~G--KTTt~~ll~~iL~~ 67 (306)
+.+-+-++|..| |||+++.+.+-|..
T Consensus 35 ~~~~~ll~Gp~G~GKTt~a~~la~~l~~ 62 (224)
T d1sxjb2 35 NMPHMIISGMPGIGKTTSVHCLAHELLG 62 (224)
T ss_dssp CCCCEEEECSTTSSHHHHHHHHHHHHHG
T ss_pred CCCeEEEECCCCCCchhhHHHHHHHHhc
Confidence 455677899765 99999998877664
No 91
>d2fzia1 c.71.1.1 (A:1-206) Dihydrofolate reductases, eukaryotic type {Fungus (Pneumocystis carinii) [TaxId: 4754]}
Probab=26.56 E-value=20 Score=27.19 Aligned_cols=13 Identities=23% Similarity=0.330 Sum_probs=11.2
Q ss_pred cCCCCCCeeeEEe
Q 021862 251 ILRTPPHRMQIVH 263 (306)
Q Consensus 251 ~~~~~~gR~e~~~ 263 (306)
.++|+|+|..++-
T Consensus 68 ~~~pLp~R~niVl 80 (206)
T d2fzia1 68 QFRPLKGRINVVI 80 (206)
T ss_dssp GGCSCTTEEEEEE
T ss_pred ccccCCCCeEEEE
Confidence 4689999999995
No 92
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=25.25 E-value=23 Score=24.45 Aligned_cols=18 Identities=39% Similarity=0.431 Sum_probs=12.9
Q ss_pred cEEEEecC--CChhhHHHHH
Q 021862 44 KILAVTGT--NGKSTVVTFV 61 (306)
Q Consensus 44 ~~I~VtGT--~GKTTt~~ll 61 (306)
++|.++|- .||||++.-|
T Consensus 3 klIii~G~pGsGKTTla~~L 22 (152)
T d1ly1a_ 3 KIILTIGCPGSGKSTWAREF 22 (152)
T ss_dssp EEEEEECCTTSSHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHH
Confidence 46778886 4799987643
No 93
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.15 E-value=21 Score=28.60 Aligned_cols=26 Identities=27% Similarity=0.497 Sum_probs=19.8
Q ss_pred CCCcEEEEecCCC--hhhHHHHHHHHHH
Q 021862 41 RSIKILAVTGTNG--KSTVVTFVGQMLN 66 (306)
Q Consensus 41 ~~~~~I~VtGT~G--KTTt~~ll~~iL~ 66 (306)
.+..+++|.|-|| |||+..+|.-++.
T Consensus 60 ~~Ge~vaivG~nGsGKSTLl~~i~Gl~~ 87 (281)
T d1r0wa_ 60 EKGEMLAITGSTGSGKTSLLMLILGELE 87 (281)
T ss_dssp CTTCEEEEEESTTSSHHHHHHHHHTSSC
T ss_pred cCCCEEEEECCCCChHHHHHHHHhCCCc
Confidence 4667899999875 8988888765544
No 94
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=24.97 E-value=23 Score=27.73 Aligned_cols=26 Identities=27% Similarity=0.548 Sum_probs=20.6
Q ss_pred CCCcEEEEecCC--ChhhHHHHHHHHHH
Q 021862 41 RSIKILAVTGTN--GKSTVVTFVGQMLN 66 (306)
Q Consensus 41 ~~~~~I~VtGT~--GKTTt~~ll~~iL~ 66 (306)
.+..+++|.|-+ ||||...+|.-+++
T Consensus 26 ~~Ge~vaivG~sGsGKSTLl~ll~gl~~ 53 (242)
T d1mv5a_ 26 QPNSIIAFAGPSGGGKSTIFSLLERFYQ 53 (242)
T ss_dssp CTTEEEEEECCTTSSHHHHHHHHTTSSC
T ss_pred cCCCEEEEECCCCCCHHHHHHHHHHhhC
Confidence 366799999987 79998888766655
No 95
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.68 E-value=23 Score=27.88 Aligned_cols=26 Identities=35% Similarity=0.563 Sum_probs=20.7
Q ss_pred CCCcEEEEecCCC--hhhHHHHHHHHHH
Q 021862 41 RSIKILAVTGTNG--KSTVVTFVGQMLN 66 (306)
Q Consensus 41 ~~~~~I~VtGT~G--KTTt~~ll~~iL~ 66 (306)
.+..+++|.|-+| |||...+|.-+++
T Consensus 38 ~~Ge~vaivG~sGsGKSTLl~li~gl~~ 65 (251)
T d1jj7a_ 38 RPGEVTALVGPNGSGKSTVAALLQNLYQ 65 (251)
T ss_dssp CTTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred cCCCEEEEECCCCCcHHHHHHHHhcccC
Confidence 3667999999885 9999988866655
No 96
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=23.64 E-value=31 Score=29.02 Aligned_cols=37 Identities=35% Similarity=0.299 Sum_probs=21.9
Q ss_pred HHhhCCCCCcEEEEecC--CChhhHHHHHHHHHHhcCCC
Q 021862 35 AAQVIPRSIKILAVTGT--NGKSTVVTFVGQMLNHLGIE 71 (306)
Q Consensus 35 ~~~~~~~~~~~I~VtGT--~GKTTt~~ll~~iL~~~g~~ 71 (306)
+.+......-.|.|||. .|||||.+-+-.-+...+.+
T Consensus 150 l~~l~~~~~GliLvtGpTGSGKSTTl~~~l~~~~~~~~~ 188 (401)
T d1p9ra_ 150 FRRLIKRPHGIILVTGPTGSGKSTTLYAGLQELNSSERN 188 (401)
T ss_dssp HHHHHTSSSEEEEEECSTTSCHHHHHHHHHHHHCCTTSC
T ss_pred HHHHHhhhhceEEEEcCCCCCccHHHHHHhhhhcCCCce
Confidence 33444344568999996 57888876654444333333
No 97
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=22.56 E-value=25 Score=27.67 Aligned_cols=25 Identities=28% Similarity=0.547 Sum_probs=19.4
Q ss_pred CCcEEEEecCCC--hhhHHHHHHHHHH
Q 021862 42 SIKILAVTGTNG--KSTVVTFVGQMLN 66 (306)
Q Consensus 42 ~~~~I~VtGT~G--KTTt~~ll~~iL~ 66 (306)
...+++|.|-+| |||...+|.-+++
T Consensus 40 ~Ge~iaivG~sGsGKSTLl~ll~gl~~ 66 (253)
T d3b60a1 40 AGKTVALVGRSGSGKSTIASLITRFYD 66 (253)
T ss_dssp TTCEEEEEECTTSSHHHHHHHHTTTTC
T ss_pred CCCEEEEECCCCChHHHHHHHHhcccC
Confidence 566899999876 9999888765544
No 98
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=22.53 E-value=23 Score=27.75 Aligned_cols=26 Identities=15% Similarity=0.296 Sum_probs=21.5
Q ss_pred CCCcEEEEecCCC--hhhHHHHHHHHHH
Q 021862 41 RSIKILAVTGTNG--KSTVVTFVGQMLN 66 (306)
Q Consensus 41 ~~~~~I~VtGT~G--KTTt~~ll~~iL~ 66 (306)
++..+++|.|-|| |||+.+++.-++.
T Consensus 29 ~~Ge~~~iiG~sGsGKSTll~~i~gl~~ 56 (242)
T d1oxxk2 29 ENGERFGILGPSGAGKTTFMRIIAGLDV 56 (242)
T ss_dssp CTTCEEEEECSCHHHHHHHHHHHHTSSC
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHcCcC
Confidence 3567999999985 9999999887665
No 99
>d1rtta_ c.23.5.4 (A:) Hypothetical protein PA1204 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=22.45 E-value=32 Score=25.01 Aligned_cols=25 Identities=20% Similarity=0.167 Sum_probs=21.0
Q ss_pred CcEEEEecCCChhhHHHHHHHHHHh
Q 021862 43 IKILAVTGTNGKSTVVTFVGQMLNH 67 (306)
Q Consensus 43 ~~~I~VtGT~GKTTt~~ll~~iL~~ 67 (306)
+|+++|.||.=|+|.++.+...+.+
T Consensus 1 MKIl~i~GS~r~~s~s~~l~~~~~~ 25 (174)
T d1rtta_ 1 IKVLGISGSLRSGSYNSAALQEAIG 25 (174)
T ss_dssp CEEEEEESCCSTTCHHHHHHHHHHT
T ss_pred CEEEEEECCCCCCCHHHHHHHHHHH
Confidence 4799999999999998888776654
No 100
>d1df7a_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=22.07 E-value=7.9 Score=28.52 Aligned_cols=16 Identities=25% Similarity=0.428 Sum_probs=12.3
Q ss_pred Hhh-cCCCCCCeeeEEe
Q 021862 248 TIE-ILRTPPHRMQIVH 263 (306)
Q Consensus 248 ~l~-~~~~~~gR~e~~~ 263 (306)
.|. .++|+|+|..++-
T Consensus 49 Slp~~~~pLp~R~niVl 65 (159)
T d1df7a_ 49 SLPAKVRPLPGRRNVVL 65 (159)
T ss_dssp HSCGGGSSCTTSEEEEE
T ss_pred hhccccccCCCcceEEE
Confidence 343 3689999999985
No 101
>d1kmva_ c.71.1.1 (A:) Dihydrofolate reductases, eukaryotic type {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.42 E-value=20 Score=26.71 Aligned_cols=53 Identities=15% Similarity=0.087 Sum_probs=27.7
Q ss_pred Hhhc-CCCCCCeeeEEeeccCCEEEEEcC--CCCcHHHHHHHHhccC---CCcEEEEECC
Q 021862 248 TIEI-LRTPPHRMQIVHRDIQGVTWVDDS--KATNLEATCTGLMDLK---GHKCVILLGG 301 (306)
Q Consensus 248 ~l~~-~~~~~gR~e~~~~~~~~~~ii~D~--~~~n~~s~~~al~~~~---~~~~i~v~G~ 301 (306)
.|.. .+|+|+|..++-. .+.-.-.++. ..++.+.+.+.++... ..+-++|+||
T Consensus 59 Slp~~~~pLp~R~niVlS-r~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~i~IiGG 117 (186)
T d1kmva_ 59 SIPEKNRPLKGRINLVLS-RELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGG 117 (186)
T ss_dssp HSCGGGCSCTTSEEEEEC-SSCSSCCTTCSEEESSHHHHHHHHTSTTTTTTEEEEEECCC
T ss_pred cccccCcccCCceEEEEe-cccccccccceeeccCHHHHHHHhhhHhhccCCCeEEEEcc
Confidence 4443 5789999999853 2211111111 1244555555544432 2245888888
No 102
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=20.92 E-value=26 Score=27.76 Aligned_cols=20 Identities=35% Similarity=0.547 Sum_probs=15.6
Q ss_pred CCcEEEEec--CCChhhHHHHH
Q 021862 42 SIKILAVTG--TNGKSTVVTFV 61 (306)
Q Consensus 42 ~~~~I~VtG--T~GKTTt~~ll 61 (306)
..|.|+|.| +.||||....|
T Consensus 25 ~~P~ivvvG~~SsGKSsliNaL 46 (299)
T d2akab1 25 DLPQIAVVGGQSAGKSSVLENF 46 (299)
T ss_dssp CCCEEEEEEBTTSCHHHHHHHH
T ss_pred CCCeEEEEcCCCCCHHHHHHHH
Confidence 567799998 68999876654
No 103
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=20.66 E-value=34 Score=26.44 Aligned_cols=26 Identities=15% Similarity=0.304 Sum_probs=20.9
Q ss_pred CCCcEEEEecCCC--hhhHHHHHHHHHH
Q 021862 41 RSIKILAVTGTNG--KSTVVTFVGQMLN 66 (306)
Q Consensus 41 ~~~~~I~VtGT~G--KTTt~~ll~~iL~ 66 (306)
.+..++++.|-|| |||+.++|.-++.
T Consensus 24 ~~Ge~~~liGpsGaGKSTll~~l~Gl~~ 51 (229)
T d3d31a2 24 ESGEYFVILGPTGAGKTLFLELIAGFHV 51 (229)
T ss_dssp CTTCEEEEECCCTHHHHHHHHHHHTSSC
T ss_pred CCCCEEEEECCCCCcHHHHHHHHhcCcC
Confidence 3667899999974 9999999887665
No 104
>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.61 E-value=48 Score=23.59 Aligned_cols=35 Identities=9% Similarity=0.090 Sum_probs=24.8
Q ss_pred CEEEEEcCCCCcHHHHHHHHhccCCCcEEEEECCCC
Q 021862 268 GVTWVDDSKATNLEATCTGLMDLKGHKCVILLGGQA 303 (306)
Q Consensus 268 ~~~ii~D~~~~n~~s~~~al~~~~~~~~i~v~G~~~ 303 (306)
++.++.|+ ..++..++.+++.++.+..++++|-.+
T Consensus 97 g~Dvvid~-~G~~~~~~~a~~~~~~gG~iv~~G~~~ 131 (171)
T d1pl8a2 97 KPEVTIEC-TGAEASIQAGIYATRSGGTLVLVGLGS 131 (171)
T ss_dssp CCSEEEEC-SCCHHHHHHHHHHSCTTCEEEECSCCC
T ss_pred CceEEEec-cCCchhHHHHHHHhcCCCEEEEEecCC
Confidence 44566666 778888888999887655666666543
No 105
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.42 E-value=38 Score=24.52 Aligned_cols=27 Identities=22% Similarity=0.292 Sum_probs=20.3
Q ss_pred cEEEEecC--CChhhHHHHHHHHHHhcCCCcc
Q 021862 44 KILAVTGT--NGKSTVVTFVGQMLNHLGIEAF 73 (306)
Q Consensus 44 ~~I~VtGT--~GKTTt~~ll~~iL~~~g~~~~ 73 (306)
++|.|.|- .||||.+.+|+.-| |+.+.
T Consensus 2 ~iI~i~GppGSGKsT~a~~La~~~---g~~~i 30 (194)
T d1teva_ 2 LVVFVLGGPGAGKGTQCARIVEKY---GYTHL 30 (194)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHH---CCEEE
T ss_pred cEEEEECCCCCCHHHHHHHHHHHh---CCceE
Confidence 46777776 58999999998755 66654
No 106
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=20.42 E-value=30 Score=26.98 Aligned_cols=25 Identities=20% Similarity=0.461 Sum_probs=19.1
Q ss_pred CCcEEEEecCC--ChhhHHHHHHHHHH
Q 021862 42 SIKILAVTGTN--GKSTVVTFVGQMLN 66 (306)
Q Consensus 42 ~~~~I~VtGT~--GKTTt~~ll~~iL~ 66 (306)
+...|+|.|-+ ||||...+|.-++.
T Consensus 28 ~Ge~vaIvG~sGsGKSTLl~ll~gl~~ 54 (241)
T d2pmka1 28 QGEVIGIVGRSGSGKSTLTKLIQRFYI 54 (241)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhcCC
Confidence 56789999987 58888877766554
Done!