BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021863
(306 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3ED68|Y1295_ARATH Uncharacterized PKHD-type hydroxylase At1g22950 OS=Arabidopsis
thaliana GN=At1g22950 PE=2 SV=2
Length = 397
Score = 347 bits (890), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 153/258 (59%), Positives = 207/258 (80%)
Query: 46 RLRLNPSKDHKPESYDDMQLDFSPSIFSSLERYLPPPMLGLNREEKVKFMREILMKYLPQ 105
+LR P+++H+PE+Y+D+ LD+SPS+F+SLERYLP +L R +K FMR++L++Y P
Sbjct: 39 KLRRTPNEEHEPENYEDLPLDYSPSLFTSLERYLPEQLLNSTRIDKASFMRDLLLRYSPD 98
Query: 106 GERTRVQRHRDYRQKIITNYQPLHRELYNLHIGNFFVPPFVKAIQDNTEESFRSIISEPS 165
ER RV RH++YR KI+++YQ LH E+Y L +FF P F+ A +E +FRS + E
Sbjct: 99 TERVRVLRHKEYRDKIMSSYQRLHGEIYTLDPSSFFAPSFLGAFSRKSEPNFRSSMVESY 158
Query: 166 PGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFGLETMLDKL 225
PG+FTFEM +P+FCE+LLAEVE+ EKWV +++ IMRPNTMN +G VLDDFG ++ML KL
Sbjct: 159 PGIFTFEMFKPQFCEMLLAEVEHMEKWVYDSRSTIMRPNTMNNFGVVLDDFGFDSMLQKL 218
Query: 226 METYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTG 285
++ +I P+++V F EV G++LDSHHG++VEYGKDRDVDLGFHVDDSEV+LNVCLGKQF+G
Sbjct: 219 VDDFISPIAQVLFPEVCGTSLDSHHGYIVEYGKDRDVDLGFHVDDSEVSLNVCLGKQFSG 278
Query: 286 GELFFRGTRCEKHVNTGS 303
GEL+FRG RC+KHVN+ S
Sbjct: 279 GELYFRGVRCDKHVNSDS 296
>sp|A3KGZ2|OGFD2_DANRE 2-oxoglutarate and iron-dependent oxygenase domain-containing
protein 2 OS=Danio rerio GN=ogfod2 PE=2 SV=1
Length = 345
Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 115/201 (57%), Gaps = 16/201 (7%)
Query: 105 QGERTRVQRHR---DYRQKIITN-YQPLHRELYNLHIGNFFVPPFVKAI------QDNTE 154
Q E R Q H+ R +I Y PLH+ +Y+L +F P ++ + + N +
Sbjct: 59 QAEIERRQNHKLKSTERAAVIKEIYTPLHQHVYHLQ-ESFLAPELLEMVKYCASSEANVQ 117
Query: 155 ESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLD 214
+ I +E + VF F++ + FC+ LL E+E+FE ++ RPNTMN YG VL+
Sbjct: 118 GLLKLIQTEAASRVFRFQVFRKEFCKDLLEELEHFE----QSDAPKGRPNTMNNYGIVLN 173
Query: 215 DFGL-ETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEV 273
+ G E + L E Y+RPL+ + +++ GG+ LDSH FVV+Y D++L +H D+SEV
Sbjct: 174 ELGFDEGFITPLREVYLRPLTALLYSDCGGNCLDSHKAFVVKYDMHEDLNLSYHYDNSEV 233
Query: 274 TLNVCLGKQFTGGELFFRGTR 294
TLNV LGK FT G LFF R
Sbjct: 234 TLNVSLGKDFTEGNLFFGDMR 254
>sp|Q28C22|OGFD2_XENTR 2-oxoglutarate and iron-dependent oxygenase domain-containing
protein 2 OS=Xenopus tropicalis GN=ogfod2 PE=2 SV=1
Length = 349
Score = 125 bits (313), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 102/180 (56%), Gaps = 12/180 (6%)
Query: 118 RQKIITNYQPLHRELYNLHIGNFFVPPFVKAI------QDNTEESFRSIISEPSPGVFTF 171
R++I +Y+PL+ E+Y L +F F+ A+ Q N E + S ++
Sbjct: 80 RREISLHYKPLYPEVYVLQ-ESFLAAEFLTAVKYSKSPQANVEGLLHHLHSITDKRIYRL 138
Query: 172 EMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFG-LETMLDKLMETYI 230
+ P FC L+ E+ENFE+ + RPNTMN YG +L++ G ++ + L E YI
Sbjct: 139 PVFIPEFCAKLVEELENFER----SDLPKGRPNTMNNYGILLNELGFVDALTAPLCEKYI 194
Query: 231 RPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTGGELFF 290
PL+ + F + GG LDSH FVV+Y D+DL H D++EVTLNV LGK+FT G L+F
Sbjct: 195 EPLTSLLFPDWGGGCLDSHRAFVVKYALQEDLDLSCHYDNAEVTLNVSLGKEFTDGNLYF 254
>sp|Q9CQ04|OGFD2_MOUSE 2-oxoglutarate and iron-dependent oxygenase domain-containing
protein 2 OS=Mus musculus GN=Ogfod2 PE=2 SV=1
Length = 349
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 108/198 (54%), Gaps = 17/198 (8%)
Query: 106 GERTRVQRHRDYRQKII-TNYQPLHRELYNLHIGNFFVPPFVKAIQDNTE---------E 155
G R R+ + R+ +I ++Y P E+Y+ P F+ A + +T +
Sbjct: 68 GRRRRLGQESAVRKALIASSYHPARPEVYSSLQDAALAPEFMAAAEYSTSPGADLEGLLQ 127
Query: 156 SFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDD 215
++ E ++ + +FC+ LL E+E+FE ++ RPNTMN +G ++ +
Sbjct: 128 RLETVSEEKR--IYRVPVFSAKFCQTLLEELEHFE----QSDMPKGRPNTMNNHGVLMYE 181
Query: 216 FGLET-MLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVT 274
GL+ ++ L E ++ PL + + + GG LDSH FVV+Y +D+DLG H D++E+T
Sbjct: 182 LGLDDPLVTPLRERFLLPLMALLYPDYGGGYLDSHRAFVVKYALGQDLDLGCHYDNAELT 241
Query: 275 LNVCLGKQFTGGELFFRG 292
LNV LGK FTGG L+F G
Sbjct: 242 LNVALGKDFTGGALYFGG 259
>sp|Q6N063|OGFD2_HUMAN 2-oxoglutarate and iron-dependent oxygenase domain-containing
protein 2 OS=Homo sapiens GN=OGFOD2 PE=2 SV=2
Length = 350
Score = 111 bits (278), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 105/196 (53%), Gaps = 17/196 (8%)
Query: 108 RTRVQRHRDYRQKII-TNYQPLHRELYNLHIGNFFVPPFVKAIQDNTE---------ESF 157
R R+ + R+ +I ++Y P E+Y+ P F+ + + +
Sbjct: 71 RQRLGQESAARKALIASSYHPARPEVYDSLQDAALAPEFLAVTEYSVSPDADLKGLLQRL 130
Query: 158 RSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFG 217
++ E ++ + FC+ LL E+E+FE ++ RPNTMN YG +L + G
Sbjct: 131 ETVSEEKR--IYRVPVFTAPFCQALLEELEHFE----QSDMPKGRPNTMNNYGVLLHELG 184
Query: 218 L-ETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLN 276
L E ++ L E +++PL + + + GG LDSH FVV+Y +D++LG H D++E+TLN
Sbjct: 185 LDEPLMTPLRERFLQPLMALLYPDCGGGRLDSHRAFVVKYAPGQDLELGCHYDNAELTLN 244
Query: 277 VCLGKQFTGGELFFRG 292
V LGK FTGG L+F G
Sbjct: 245 VALGKVFTGGALYFGG 260
>sp|Q20679|PLOD_CAEEL Procollagen-lysine,2-oxoglutarate 5-dioxygenase OS=Caenorhabditis
elegans GN=let-268 PE=1 SV=1
Length = 730
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 8/143 (5%)
Query: 160 IISEPSPGVFTFEMLQPRFCELLLAEVENFEKWV----NEAKFRIMRPNTMNKYGAVLDD 215
++ + P V+ F ++ RFCE L+ E+E F +W N+ + N + ++
Sbjct: 549 VVDQACPDVYDFPLMSERFCEELIEEMEGFGRWSDGSNNDKRLAGGYENVPTR-DIHMNQ 607
Query: 216 FGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTL 275
G E M+TY+RP+ + F ++S+ FVV Y + L H D S ++
Sbjct: 608 VGFERQWLYFMDTYVRPVQEKTFIGYYHQPVESNMMFVVRYKPEEQPSLRPHHDASTFSI 667
Query: 276 NVCL---GKQFTGGELFFRGTRC 295
++ L G+ + GG + + C
Sbjct: 668 DIALNKKGRDYEGGGVRYIRYNC 690
>sp|Q5R6K5|PLOD3_PONAB Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Pongo abelii
GN=PLOD3 PE=2 SV=1
Length = 738
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 13/146 (8%)
Query: 159 SIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAV------ 212
I+ +P P V+ F +L + C+ L+AE+E++ +W + R Y V
Sbjct: 557 GIVEQPCPDVYWFPLLSEQMCDELVAEMEHYGQW---SGGRHEDSRLAGGYENVPTVDIH 613
Query: 213 LDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSE 272
+ G E +L+ TY+ P+++ F + + FVV Y D L H D S
Sbjct: 614 MKQVGYEDQWLQLLRTYVGPMTESLFPGY-HTKARAVMNFVVRYRPDEQPSLRPHHDSST 672
Query: 273 VTLNVCL---GKQFTGGELFFRGTRC 295
TLNV L G + GG F C
Sbjct: 673 FTLNVALNHKGLDYEGGGCRFLRYDC 698
>sp|O60568|PLOD3_HUMAN Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Homo sapiens
GN=PLOD3 PE=1 SV=1
Length = 738
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 13/146 (8%)
Query: 159 SIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAV------ 212
I+ +P P V+ F +L + C+ L+AE+E++ +W + R Y V
Sbjct: 557 GIVEQPCPDVYWFPLLSEQMCDELVAEMEHYGQW---SGGRHEDSRLAGGYENVPTVDIH 613
Query: 213 LDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSE 272
+ G E +L+ TY+ P+++ F + + FVV Y D L H D S
Sbjct: 614 MKQVGYEDQWLQLLRTYVGPMTESLFPGY-HTKARAVMNFVVRYRPDEQPSLRPHHDSST 672
Query: 273 VTLNVCL---GKQFTGGELFFRGTRC 295
TLNV L G + GG F C
Sbjct: 673 FTLNVALNHKGLDYEGGGCRFLRYDC 698
>sp|Q9R0B9|PLOD2_MOUSE Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 OS=Mus musculus
GN=Plod2 PE=2 SV=2
Length = 737
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 159 SIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDD--- 215
+I+ +P P VF F + R C+ L+ E+E++ KW + K R Y V D
Sbjct: 556 NIVEQPCPDVFWFPIFSERACDELVEEMEHYGKW-SGGKHHDSR--ISGGYENVPTDDIH 612
Query: 216 ---FGLETMLDKLMETYIRPLS-KVF--FAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVD 269
GLE + + +I P++ KVF + G + L+ FVV+Y +R L H D
Sbjct: 613 MKQIGLENVWLHFIREFIAPVTLKVFAGYYTKGFALLN----FVVKYSPERQRSLRPHHD 668
Query: 270 DSEVTLNVCL---GKQFTGGELFFRGTRC 295
S T+N+ L G+ F GG F C
Sbjct: 669 ASTFTINIALNNVGEDFQGGGCKFLRYNC 697
>sp|Q9R0E1|PLOD3_MOUSE Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Mus musculus
GN=Plod3 PE=1 SV=1
Length = 741
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 13/145 (8%)
Query: 160 IISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAV------L 213
++ +P P V+ F +L + C+ L+ E+E++ +W + R Y V +
Sbjct: 561 LVEQPCPDVYWFPLLTEQMCDELVEEMEHYGQW---SGGRHEDSRLAGGYENVPTVDIHM 617
Query: 214 DDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEV 273
G E +L+ TY+ P+++ F T + FVV Y D L H D S
Sbjct: 618 KQVGYEDQWLQLLRTYVGPMTEYLFPGYHTKT-RAVMNFVVRYRPDEQPSLRPHHDSSTF 676
Query: 274 TLNVCL---GKQFTGGELFFRGTRC 295
TLNV L G + GG F C
Sbjct: 677 TLNVALNHKGVDYEGGGCRFLRYDC 701
>sp|Q5U367|PLOD3_RAT Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Rattus
norvegicus GN=Plod3 PE=2 SV=1
Length = 741
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 13/145 (8%)
Query: 160 IISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAV------L 213
++ +P P V+ F +L + C+ L+ E+E++ +W + R Y V +
Sbjct: 561 LVEQPCPDVYWFPLLTEQMCDELVEEMEHYGQW---SGGRHEDSRLAGGYENVPTVDIHM 617
Query: 214 DDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEV 273
G E +L+ TY+ P+++ F T + FVV Y D L H D S
Sbjct: 618 KQVGYEDQWLQLLRTYVGPMTEHLFPGYHTKT-RAVMNFVVRYRPDEQPSLRPHHDSSTF 676
Query: 274 TLNVCL---GKQFTGGELFFRGTRC 295
TLNV L G + GG F C
Sbjct: 677 TLNVALNHKGVDYEGGGCRFLRYDC 701
>sp|Q811A3|PLOD2_RAT Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 OS=Rattus
norvegicus GN=Plod2 PE=2 SV=1
Length = 737
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 159 SIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDD--- 215
+I+ +P P VF F + R C+ L+ E+E++ KW + K R Y V D
Sbjct: 556 NIVEQPCPDVFWFPIFSERACDELVEEMEHYGKW-SGGKHHDSR--ISGGYENVPTDDIH 612
Query: 216 ---FGLETMLDKLMETYIRPLS-KVF--FAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVD 269
LE + + +I P++ KVF + G + L+ FVV+Y +R L H D
Sbjct: 613 MKQIDLENVWLHFIREFIAPVTLKVFAGYYTKGFALLN----FVVKYSPERQRSLRPHHD 668
Query: 270 DSEVTLNVCL---GKQFTGGELFFRGTRC 295
S T+N+ L G+ F GG F C
Sbjct: 669 ASTFTINIALNNVGEDFQGGGCKFLRYNC 697
>sp|O00469|PLOD2_HUMAN Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 OS=Homo sapiens
GN=PLOD2 PE=1 SV=2
Length = 737
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 84/200 (42%), Gaps = 26/200 (13%)
Query: 112 QRHRDYRQKIITNYQPLHRELYNLHIGNFFVPPF---VKAIQDNTEESF-RSIISEPSPG 167
RH R NY H YN + F P K I + + F +I+ +P P
Sbjct: 508 NRHEFGRLLSTANYNTSH---YNNDLWQIFENPVDWKEKYINRDYSKIFTENIVEQPCPD 564
Query: 168 VFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDD------FGLETM 221
VF F + + C+ L+ E+E++ KW + K R Y V D LE +
Sbjct: 565 VFWFPIFSEKACDELVEEMEHYGKW-SGGKHHDSR--ISGGYENVPTDDIHMKQVDLENV 621
Query: 222 LDKLMETYIRPLS-KVF--FAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVC 278
+ +I P++ KVF + G + L+ FVV+Y +R L H D S T+N+
Sbjct: 622 WLHFIREFIAPVTLKVFAGYYTKGFALLN----FVVKYSPERQRSLRPHHDASTFTINIA 677
Query: 279 L---GKQFTGGELFFRGTRC 295
L G+ F GG F C
Sbjct: 678 LNNVGEDFQGGGCKFLRYNC 697
>sp|Q5UQC3|PLOD_MIMIV Procollagen lysyl hydroxylase and glycosyltransferase
OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L230 PE=1
SV=1
Length = 895
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 13/151 (8%)
Query: 143 PPFVKAIQDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVN--EAKF-- 198
P F+ +Q+ + + I ++ V++F + P FC+ ++ ++ W ++ F
Sbjct: 703 PEFLSHLQNFKDFDYTEICND----VYSFPLFTPAFCKEVIEVMDKANLWSKGGDSYFDP 758
Query: 199 RIMRPNTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGK 258
RI + L + GL+ ++ Y+ P + + T D + FVV+Y
Sbjct: 759 RIGGVESYPTQDTQLYEVGLDKQWHYVVFNYVAPFVRHLYNNY--KTKDINLAFVVKYDM 816
Query: 259 DRDVDLGFHVDDSEVTLNVCL---GKQFTGG 286
+R +L H D S TLN+ L GK++T G
Sbjct: 817 ERQSELAPHHDSSTYTLNIALNEYGKEYTAG 847
>sp|Q02809|PLOD1_HUMAN Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Homo sapiens
GN=PLOD1 PE=1 SV=2
Length = 727
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 9/153 (5%)
Query: 150 QDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWV--NEAKFRIMRP-NTM 206
Q+ T+ ++ P P V+ F + C+ L+ E+E+F +W N RI +
Sbjct: 537 QNYTKALAGKLVETPCPDVYWFPIFTEVACDELVEEMEHFGQWSLGNNKDNRIQGGYENV 596
Query: 207 NKYGAVLDDFGLETMLDKLMETYIRPLS-KVFFAEVGGSTLDSHHGFVVEYGKDRDVDLG 265
++ G E K + YI P++ K++ + D FVV Y D L
Sbjct: 597 PTIDIHMNQIGFEREWHKFLLEYIAPMTEKLYPGYYTRAQFDL--AFVVRYKPDEQPSLM 654
Query: 266 FHVDDSEVTLNVCL---GKQFTGGELFFRGTRC 295
H D S T+N+ L G + GG F C
Sbjct: 655 PHHDASTFTINIALNRVGVDYEGGGCRFLRYNC 687
>sp|P24802|PLOD1_CHICK Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Gallus gallus
GN=PLOD1 PE=1 SV=1
Length = 730
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 8/156 (5%)
Query: 147 KAIQDNTEESFRSIISE-PSPGVFTFEMLQPRFCELLLAEVENFEKWV--NEAKFRIMRP 203
K I +N + + + E P P V+ F + C+ L+ E+E++ KW + RI
Sbjct: 536 KYIHENYTAALKGKLVEMPCPDVYWFPIFTDTACDELVEEMEHYGKWSTGDNTDSRIQGG 595
Query: 204 -NTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDV 262
+ ++ G E K + YI P+++ + T FVV Y D
Sbjct: 596 YENVPTIDIHMNQIGFEREWYKFLLDYIAPITEKLYPGYYTKT-QFELAFVVRYKPDEQP 654
Query: 263 DLGFHVDDSEVTLNVCL---GKQFTGGELFFRGTRC 295
L H D S T+N+ L G + GG F C
Sbjct: 655 SLMPHHDASTFTINIALNRVGIDYEGGGCRFLRYNC 690
>sp|Q5R9N3|PLOD1_PONAB Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Pongo abelii
GN=PLOD1 PE=2 SV=1
Length = 727
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 9/153 (5%)
Query: 150 QDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKW-VNEAKFRIMRPNTMN- 207
Q+ T+ ++ P P V+ F + C+ L+ E+E+F +W + + K ++ N
Sbjct: 537 QNYTKALAGKLVETPCPDVYWFPIFTEVACDELVEEMEHFGQWSLGDNKDNRIQGGYENV 596
Query: 208 -KYGAVLDDFGLETMLDKLMETYIRPLS-KVFFAEVGGSTLDSHHGFVVEYGKDRDVDLG 265
++ G E K + YI P++ K++ + D FVV Y D L
Sbjct: 597 PTIDIHMNQIGFEREWHKFLLEYIAPMTEKLYPGYYTRAQFDL--AFVVRYKPDEQPSLM 654
Query: 266 FHVDDSEVTLNVCL---GKQFTGGELFFRGTRC 295
H D S T+N+ L G + GG F C
Sbjct: 655 PHHDASTFTINIALNRVGVDYEGGGCRFLRYNC 687
>sp|Q63321|PLOD1_RAT Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Rattus
norvegicus GN=Plod1 PE=2 SV=1
Length = 728
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 10/157 (6%)
Query: 147 KAIQDNTEESFRS-IISEPSPGVFTFEMLQPRFCELLLAEVENFEKW-VNEAKFRIMRPN 204
K I +N ++ ++ P P V+ F + C+ L+ E+E++ +W + + K ++
Sbjct: 534 KYIHENYTKALAGKLVETPCPDVYWFPIFTEVACDELVEEMEHYGQWSLGDNKDNRIQGG 593
Query: 205 TMN--KYGAVLDDFGLETMLDKLMETYIRPLS-KVFFAEVGGSTLDSHHGFVVEYGKDRD 261
N ++ E K + YI PL+ K++ + D FVV Y D
Sbjct: 594 YENVPTIDIHMNQITFEREWHKFLVEYIAPLTEKLYPGYYTKAQFDL--AFVVRYKPDEQ 651
Query: 262 VDLGFHVDDSEVTLNVCL---GKQFTGGELFFRGTRC 295
L H D S T+N+ L G+ + GG F C
Sbjct: 652 PSLMPHHDASTFTINIALNRVGEDYEGGGCRFLRYNC 688
>sp|Q9R0E2|PLOD1_MOUSE Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Mus musculus
GN=Plod1 PE=1 SV=1
Length = 728
Score = 40.4 bits (93), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 10/157 (6%)
Query: 147 KAIQDNTEESFRS-IISEPSPGVFTFEMLQPRFCELLLAEVENFEKW-VNEAKFRIMRPN 204
K I +N ++ ++ P P V+ F + C+ L+ E+E++ +W + + K ++
Sbjct: 534 KYIHENYTKALAGKLVETPCPDVYWFPIFTEAACDELVEEMEHYGQWSLGDNKDNRIQGG 593
Query: 205 TMN--KYGAVLDDFGLETMLDKLMETYIRPLS-KVFFAEVGGSTLDSHHGFVVEYGKDRD 261
N ++ E K + YI P++ K++ + D FVV Y D
Sbjct: 594 YENVPTIDIHMNQITFEREWHKFLVEYIAPMTEKLYPGYYTRAQFDL--AFVVRYKPDEQ 651
Query: 262 VDLGFHVDDSEVTLNVCL---GKQFTGGELFFRGTRC 295
L H D S T+N+ L G+ + GG F C
Sbjct: 652 PSLMPHHDASTFTVNIALNRVGEDYEGGGCRFLRYNC 688
>sp|O77588|PLOD1_BOVIN Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Bos taurus
GN=PLOD1 PE=2 SV=2
Length = 726
Score = 39.3 bits (90), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 10/157 (6%)
Query: 147 KAIQDNTEESFRSIISE-PSPGVFTFEMLQPRFCELLLAEVENFEKW-VNEAKFRIMRPN 204
K I +N ++ + E P P V+ F + C+ L+ E+E++ +W + + K ++
Sbjct: 532 KYIHENYTKALAGKMVEMPCPDVYWFPIFTETACDELVEEMEHYGQWSLGDNKDNRIQGG 591
Query: 205 TMN--KYGAVLDDFGLETMLDKLMETYIRPLS-KVFFAEVGGSTLDSHHGFVVEYGKDRD 261
N ++ E K + YI P++ K++ + D FVV Y D
Sbjct: 592 YENVPTIDIHMNQINFEREWHKFLVEYIAPMTEKLYPGYYTRAQFDL--AFVVRYKPDEQ 649
Query: 262 VDLGFHVDDSEVTLNVCL---GKQFTGGELFFRGTRC 295
L H D S T+N+ L G + GG F C
Sbjct: 650 PSLVPHHDASTFTINIALNRVGVDYEGGGCRFLRYNC 686
>sp|Q5M5E1|Y548_STRT2 UPF0176 protein stu0548 OS=Streptococcus thermophilus (strain ATCC
BAA-250 / LMG 18311) GN=stu0548 PE=3 SV=1
Length = 327
Score = 36.2 bits (82), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG +V YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIVTYGKDPEVQGELWDGKLYVFDERIAVDVNHVDPIVVGKDWFDGTPCERYVNCGN 267
>sp|Q03LR5|Y588_STRTD UPF0176 protein STER_0588 OS=Streptococcus thermophilus (strain
ATCC BAA-491 / LMD-9) GN=STER_0588 PE=3 SV=1
Length = 327
Score = 36.2 bits (82), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG +V YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIVTYGKDPEVQGELWDGKLYVFDERIAVDVNHVDPIVVGKDWFDGTPCERYVNCGN 267
>sp|Q5M0V5|Y548_STRT1 UPF0176 protein str0548 OS=Streptococcus thermophilus (strain CNRZ
1066) GN=str0548 PE=3 SV=1
Length = 327
Score = 36.2 bits (82), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG +V YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIVTYGKDPEVQGELWDGKLYVFDERIAVDVNHVDPIVVGKDWFDGTPCERYVNCGN 267
>sp|Q02YX4|Y1324_LACLS UPF0176 protein LACR_1324 OS=Lactococcus lactis subsp. cremoris
(strain SK11) GN=LACR_1324 PE=3 SV=1
Length = 319
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV--DLGF---HVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V DL + +V DS + + + + G +F G+ CE+++N G+
Sbjct: 204 HGGIATYGKDPEVQGDLWYGQMYVFDSRIAVPINQKEHVIVGRDWFDGSPCERYINCGN 262
>sp|A4VTD4|Y406_STRSY UPF0176 protein SSU05_0406 OS=Streptococcus suis (strain 05ZYH33)
GN=SSU05_0406 PE=3 SV=1
Length = 327
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVRGELWDGKMYVFDERIAVDVNHVNPVVVGKDWFDGTPCERYVNCGN 267
>sp|A4VZL1|Y392_STRS2 UPF0176 protein SSU98_0392 OS=Streptococcus suis (strain 98HAH33)
GN=SSU98_0392 PE=3 SV=1
Length = 327
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVRGELWDGKMYVFDERIAVDVNHVNPVVVGKDWFDGTPCERYVNCGN 267
>sp|Q9CG88|YMDE_LACLA UPF0176 protein YmdE OS=Lactococcus lactis subsp. lactis (strain
IL1403) GN=ymdE PE=3 SV=1
Length = 319
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V DS + + + + G +F G+ CE+++N G+
Sbjct: 204 HGGIATYGKDPEVQGDLWDGQMYVFDSRIAVPINQKEHVIVGRDWFDGSPCERYINCGN 262
>sp|A3CLI1|Y593_STRSV UPF0176 protein SSA_0593 OS=Streptococcus sanguinis (strain SK36)
GN=SSA_0593 PE=3 SV=1
Length = 328
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D +++++ G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERISVDINHVNPVVIGKDWFDGTPCERYVNCGN 267
>sp|A2RKR4|Y1287_LACLM UPF0176 protein llmg_1287 OS=Lactococcus lactis subsp. cremoris
(strain MG1363) GN=llmg_1287 PE=3 SV=1
Length = 319
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V DS + + + + G +F G+ CE+++N G+
Sbjct: 204 HGGIATYGKDPEVQGDLWDGQMYVFDSRIAVPINQKEHVIVGRDWFDGSPCERYINCGN 262
>sp|A8AVI2|Y476_STRGC UPF0176 protein SGO_0476 OS=Streptococcus gordonii (strain Challis
/ ATCC 35105 / CH1 / DL1 / V288) GN=SGO_0476 PE=3 SV=1
Length = 328
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D +++++ G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERISVDINHVDPVVIGKDWFDGTPCERYVNCGN 267
>sp|C1CHZ8|Y154_STRZP UPF0176 protein SPP_0154 OS=Streptococcus pneumoniae (strain P1031)
GN=SPP_0154 PE=3 SV=1
Length = 328
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|B5E5X4|Y092_STRP4 UPF0176 protein SPG_0092 OS=Streptococcus pneumoniae serotype 19F
(strain G54) GN=SPG_0092 PE=3 SV=1
Length = 328
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|C1CNW3|Y125_STRZT UPF0176 protein SPT_0125 OS=Streptococcus pneumoniae (strain
Taiwan19F-14) GN=SPT_0125 PE=3 SV=1
Length = 328
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|B1I7Z3|Y194_STRPI UPF0176 protein SPH_0194 OS=Streptococcus pneumoniae (strain
Hungary19A-6) GN=SPH_0194 PE=3 SV=1
Length = 328
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|C1C9Z1|Y154_STRP7 UPF0176 protein SP70585_0154 OS=Streptococcus pneumoniae (strain
70585) GN=SP70585_0154 PE=3 SV=1
Length = 328
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|C1CBR1|Y118_STRZJ UPF0176 protein SPJ_0118 OS=Streptococcus pneumoniae (strain JJA)
GN=SPJ_0118 PE=3 SV=1
Length = 328
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|B8ZJY0|Y105_STRPJ UPF0176 protein SPN23F01050 OS=Streptococcus pneumoniae (strain
ATCC 700669 / Spain 23F-1) GN=SPN23F01050 PE=3 SV=1
Length = 328
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|P67330|Y095_STRPN UPF0176 protein SP_0095 OS=Streptococcus pneumoniae serotype 4
(strain ATCC BAA-334 / TIGR4) GN=SP_0095 PE=3 SV=1
Length = 328
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|Q04MY5|Y091_STRP2 UPF0176 protein SPD_0091 OS=Streptococcus pneumoniae serotype 2
(strain D39 / NCTC 7466) GN=SPD_0091 PE=3 SV=1
Length = 328
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|B2IRH1|Y090_STRPS UPF0176 protein SPCG_0090 OS=Streptococcus pneumoniae (strain
CGSP14) GN=SPCG_0090 PE=3 SV=1
Length = 328
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|P67331|Y084_STRR6 UPF0176 protein spr0084 OS=Streptococcus pneumoniae (strain ATCC
BAA-255 / R6) GN=spr0084 PE=3 SV=1
Length = 328
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|P22348|PURE_METSM Probable N5-carboxyaminoimidazole ribonucleotide mutase
OS=Methanobrevibacter smithii GN=purE PE=3 SV=1
Length = 339
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 62 DMQLDFSPSIFSSLERYLPPPM--LGLNREEKVKFMREILMKYLPQGERTRVQRHRD-YR 118
D+++ +++SS++ P P+ +G++R + + ++ + R +V ++ YR
Sbjct: 89 DVKVSGLDALYSSVQMPYPSPVATVGIDRGDNGAILAARILGLYDEEIRKKVLESKEGYR 148
Query: 119 QKIITNYQPLHRELYNLHIGNFFVPPFVKAIQDNTEE 155
QK+I N + + +++ N HI N F+ + + TEE
Sbjct: 149 QKVIKNNEEIVQKIDNPHITNDFLRIKNLELNETTEE 185
>sp|Q8A7D1|TILS_BACTN tRNA(Ile)-lysidine synthase OS=Bacteroides thetaiotaomicron (strain
ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
GN=tilS PE=3 SV=1
Length = 426
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 21/112 (18%)
Query: 82 PMLGLNREEKVKFMREILMKYLPQGERTRVQRHRDYRQKIITNYQPLHRELYNLHIGNFF 141
P+L +NREE ++++++I ++ + R+ KI N PL +E+ N + N
Sbjct: 159 PLLCINREEIIRYLQQIGQDFVTDSTNLEDEYTRN---KIRLNLLPLMQEI-NPSVKNSL 214
Query: 142 VPP----------FVKAIQDN-----TEESFR--SIISEPSPGVFTFEMLQP 176
+ + K I + T E R +++ EP+P F FE L P
Sbjct: 215 IETSNHLNDVATIYNKVIDEAKTRIITPEGIRIDALLDEPAPEAFLFETLHP 266
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 166 PGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFGLETMLDKL 225
P + L RFCEL E+EN EK VN+ K + + P ++ Y ++ +G + DK
Sbjct: 422 PDHLAYNCLIRRFCEL--GEMENAEKEVNKMKLKGVSP-SVETYNILIGGYGRKYEFDKC 478
Query: 226 ME 227
+
Sbjct: 479 FD 480
>sp|Q73A25|Y1961_BACC1 UPF0176 protein BCE_1961 OS=Bacillus cereus (strain ATCC 10987)
GN=BCE_1961 PE=3 SV=1
Length = 319
Score = 32.3 bits (72), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG +V YGKD +V D +V D + + V + G+ +F G CE++VN +
Sbjct: 206 HGGIVTYGKDPEVQGELWDGQCYVFDERIAVPVNQKEHVIVGKDYFTGEPCERYVNCAN 264
>sp|A8F9I7|Y205_BACP2 UPF0176 protein BPUM_0205 OS=Bacillus pumilus (strain SAFR-032)
GN=BPUM_0205 PE=3 SV=1
Length = 322
Score = 32.3 bits (72), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 251 GFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
G +V YGKD +V D +V D+ +T+ V + G+ FF G CE++VN +
Sbjct: 205 GGIVTYGKDPEVQGKLWDGQCYVFDTRLTVPVNQTEHVVVGKDFFTGEPCERYVNCAN 262
>sp|Q65EW5|Y3574_BACLD UPF0176 protein BLi03574/BL00834 OS=Bacillus licheniformis (strain
DSM 13 / ATCC 14580) GN=BLi03574 PE=3 SV=1
Length = 322
Score = 32.0 bits (71), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG +V YGKD +V D +V D +++ V + G+ +F G CE++VN +
Sbjct: 204 HGGIVTYGKDPEVQGELWDGKCYVFDERISVPVNQKEHVIVGKDYFTGEPCERYVNCAN 262
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 119,843,643
Number of Sequences: 539616
Number of extensions: 5175086
Number of successful extensions: 12125
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 12048
Number of HSP's gapped (non-prelim): 72
length of query: 306
length of database: 191,569,459
effective HSP length: 117
effective length of query: 189
effective length of database: 128,434,387
effective search space: 24274099143
effective search space used: 24274099143
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)