Query 021864
Match_columns 306
No_of_seqs 117 out of 1495
Neff 9.9
Searched_HMMs 46136
Date Fri Mar 29 06:15:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021864.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021864hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00817 tpt Tpt phosphate/ph 100.0 9.3E-38 2E-42 272.2 27.7 293 8-306 2-299 (302)
2 PTZ00343 triose or hexose phos 100.0 7.7E-37 1.7E-41 270.1 29.9 293 6-301 47-349 (350)
3 KOG1441 Glucose-6-phosphate/ph 100.0 1E-37 2.2E-42 265.4 17.2 296 7-305 16-312 (316)
4 PLN00411 nodulin MtN21 family 100.0 1.1E-28 2.4E-33 217.3 28.3 282 15-305 20-333 (358)
5 PF08449 UAA: UAA transporter 100.0 6.6E-29 1.4E-33 216.2 25.6 283 16-306 8-303 (303)
6 PRK11272 putative DMT superfam 100.0 1.3E-27 2.7E-32 207.2 28.7 285 1-304 1-289 (292)
7 KOG1443 Predicted integral mem 100.0 1.2E-28 2.7E-33 202.3 20.2 292 6-299 14-314 (349)
8 KOG1444 Nucleotide-sugar trans 100.0 1E-26 2.2E-31 193.8 23.5 294 7-305 11-305 (314)
9 PRK11689 aromatic amino acid e 100.0 1.9E-26 4.2E-31 200.1 26.3 259 20-302 16-289 (295)
10 PF06027 DUF914: Eukaryotic pr 100.0 1.3E-26 2.7E-31 200.2 24.6 277 18-303 23-308 (334)
11 PRK15430 putative chlorampheni 100.0 3.2E-26 6.9E-31 198.8 26.7 282 1-299 1-284 (296)
12 PRK11453 O-acetylserine/cystei 100.0 1.4E-25 2.9E-30 195.2 27.0 270 19-303 15-290 (299)
13 TIGR00950 2A78 Carboxylate/Ami 100.0 7.6E-26 1.6E-30 193.3 24.6 254 23-295 4-259 (260)
14 PRK10532 threonine and homoser 99.9 2.6E-24 5.6E-29 186.6 28.5 271 7-304 11-285 (293)
15 TIGR03340 phn_DUF6 phosphonate 99.9 1.8E-22 3.9E-27 174.1 23.9 265 18-297 11-280 (281)
16 KOG1442 GDP-fucose transporter 99.9 3.2E-24 7E-29 173.6 8.9 290 12-304 32-331 (347)
17 TIGR00688 rarD rarD protein. T 99.9 1.2E-19 2.5E-24 154.7 24.7 240 17-275 11-255 (256)
18 COG5070 VRG4 Nucleotide-sugar 99.9 1.1E-20 2.5E-25 148.8 16.4 285 10-304 8-300 (309)
19 COG0697 RhaT Permeases of the 99.9 7.2E-19 1.6E-23 152.3 29.1 270 16-303 15-290 (292)
20 KOG1580 UDP-galactose transpor 99.9 8.6E-21 1.9E-25 150.6 12.8 259 36-302 50-315 (337)
21 KOG1581 UDP-galactose transpor 99.8 3.5E-19 7.6E-24 147.0 21.4 278 16-301 22-314 (327)
22 KOG2765 Predicted membrane pro 99.8 8.7E-20 1.9E-24 154.5 16.1 227 74-302 158-392 (416)
23 PF04142 Nuc_sug_transp: Nucle 99.8 1.5E-19 3.3E-24 151.2 16.8 213 73-291 15-244 (244)
24 KOG2234 Predicted UDP-galactos 99.8 3.3E-18 7.2E-23 145.1 24.8 287 11-303 18-325 (345)
25 KOG1582 UDP-galactose transpor 99.8 3.2E-19 7E-24 144.6 14.0 289 6-302 40-334 (367)
26 KOG3912 Predicted integral mem 99.8 7.3E-18 1.6E-22 137.4 17.9 287 11-300 6-334 (372)
27 TIGR00776 RhaT RhaT L-rhamnose 99.8 6.7E-17 1.4E-21 139.6 25.1 255 20-300 13-288 (290)
28 COG2962 RarD Predicted permeas 99.8 2.3E-16 5E-21 130.4 25.9 278 7-302 6-285 (293)
29 COG5006 rhtA Threonine/homoser 99.8 1.5E-16 3.3E-21 128.1 20.3 249 26-300 30-282 (292)
30 PF03151 TPT: Triose-phosphate 99.7 3.2E-17 6.9E-22 128.6 13.0 145 156-300 1-153 (153)
31 KOG1583 UDP-N-acetylglucosamin 99.7 2.8E-17 6.1E-22 133.8 12.4 275 13-300 9-314 (330)
32 KOG4510 Permease of the drug/m 99.7 1.4E-18 2.9E-23 140.8 0.6 265 17-300 47-325 (346)
33 KOG2766 Predicted membrane pro 99.6 2.1E-16 4.5E-21 127.4 6.2 264 18-300 28-299 (336)
34 TIGR00803 nst UDP-galactose tr 99.4 2.4E-12 5.1E-17 107.3 8.5 194 99-298 2-222 (222)
35 PF00892 EamA: EamA-like trans 99.3 7E-12 1.5E-16 94.5 7.9 122 20-146 3-125 (126)
36 COG2510 Predicted membrane pro 99.3 3E-11 6.4E-16 87.5 9.5 135 156-299 4-138 (140)
37 COG2510 Predicted membrane pro 99.2 1.2E-10 2.6E-15 84.4 8.9 124 20-146 15-138 (140)
38 PF13536 EmrE: Multidrug resis 99.2 1.4E-10 3E-15 85.8 7.6 107 44-151 2-110 (113)
39 KOG4314 Predicted carbohydrate 99.1 7.1E-11 1.5E-15 92.1 5.0 222 74-303 52-279 (290)
40 PF00892 EamA: EamA-like trans 99.1 3.8E-10 8.2E-15 84.9 8.4 124 165-299 1-125 (126)
41 PF06800 Sugar_transport: Suga 99.0 9.4E-08 2E-12 80.2 19.0 209 73-297 43-268 (269)
42 PRK15430 putative chlorampheni 98.9 3.8E-08 8.3E-13 85.6 14.7 143 149-299 2-144 (296)
43 TIGR00688 rarD rarD protein. T 98.9 3.8E-08 8.2E-13 83.8 13.6 139 155-299 2-141 (256)
44 TIGR00950 2A78 Carboxylate/Ami 98.8 2E-07 4.4E-12 79.4 14.3 128 11-142 131-259 (260)
45 TIGR03340 phn_DUF6 phosphonate 98.8 1.6E-07 3.4E-12 81.2 13.4 133 157-300 3-135 (281)
46 PF05653 Mg_trans_NIPA: Magnes 98.6 1.2E-06 2.6E-11 75.8 14.3 217 78-304 53-296 (300)
47 PLN00411 nodulin MtN21 family 98.6 1.3E-06 2.8E-11 77.6 13.1 136 156-299 14-155 (358)
48 PRK15051 4-amino-4-deoxy-L-ara 98.5 1.5E-06 3.2E-11 63.8 9.3 65 83-147 45-109 (111)
49 COG2962 RarD Predicted permeas 98.5 3.5E-06 7.6E-11 70.5 12.5 142 152-301 4-145 (293)
50 PRK13499 rhamnose-proton sympo 98.4 0.00018 3.9E-09 63.0 22.6 225 72-300 70-341 (345)
51 PF03151 TPT: Triose-phosphate 98.4 1.3E-05 2.8E-10 62.5 13.8 130 16-146 8-152 (153)
52 PRK10532 threonine and homoser 98.4 1.4E-05 3E-10 69.5 13.9 122 18-146 158-280 (293)
53 PRK11272 putative DMT superfam 98.3 9E-06 2E-10 70.6 12.7 109 39-148 177-286 (292)
54 PRK02971 4-amino-4-deoxy-L-ara 98.3 9.9E-06 2.1E-10 60.9 11.0 124 155-306 2-128 (129)
55 TIGR00817 tpt Tpt phosphate/ph 98.3 5.9E-06 1.3E-10 72.1 10.5 134 13-147 150-293 (302)
56 PTZ00343 triose or hexose phos 98.2 4.1E-05 8.9E-10 68.2 14.1 138 153-299 47-185 (350)
57 PRK11453 O-acetylserine/cystei 98.2 5.3E-05 1.1E-09 66.0 14.5 135 13-147 148-287 (299)
58 PRK11689 aromatic amino acid e 98.2 2.8E-05 6.1E-10 67.6 12.7 129 155-299 4-136 (295)
59 KOG2922 Uncharacterized conser 98.0 1.6E-05 3.5E-10 67.4 6.7 69 78-146 67-135 (335)
60 PF13536 EmrE: Multidrug resis 98.0 8.8E-05 1.9E-09 54.7 9.6 70 233-303 39-109 (113)
61 TIGR00776 RhaT RhaT L-rhamnose 97.9 0.00027 5.7E-09 61.3 13.0 120 19-146 163-287 (290)
62 PRK15051 4-amino-4-deoxy-L-ara 97.9 0.00035 7.5E-09 51.2 11.0 57 243-299 52-108 (111)
63 PRK02971 4-amino-4-deoxy-L-ara 97.8 5.7E-05 1.2E-09 56.8 6.5 73 77-149 50-124 (129)
64 PF08449 UAA: UAA transporter 97.7 0.0005 1.1E-08 60.0 12.0 127 167-302 12-138 (303)
65 PF06027 DUF914: Eukaryotic pr 97.7 0.00088 1.9E-08 58.7 12.4 140 154-300 12-151 (334)
66 PF04657 DUF606: Protein of un 97.7 0.001 2.2E-08 50.8 11.1 130 157-297 3-138 (138)
67 COG0697 RhaT Permeases of the 97.6 0.0017 3.7E-08 55.9 13.8 141 153-303 5-146 (292)
68 PRK10452 multidrug efflux syst 97.5 0.00033 7.1E-09 51.8 6.0 70 78-147 33-103 (120)
69 PRK09541 emrE multidrug efflux 97.4 0.00061 1.3E-08 49.6 6.3 70 78-147 33-103 (110)
70 PF06800 Sugar_transport: Suga 97.4 0.0031 6.7E-08 53.3 11.1 103 21-133 151-253 (269)
71 COG5006 rhtA Threonine/homoser 97.3 0.0032 6.9E-08 51.9 9.9 126 12-143 152-278 (292)
72 PRK10650 multidrug efflux syst 97.3 0.0049 1.1E-07 44.8 9.8 68 78-145 38-106 (109)
73 PRK09541 emrE multidrug efflux 97.2 0.0013 2.8E-08 47.9 6.5 56 248-303 50-106 (110)
74 PRK10650 multidrug efflux syst 97.2 0.0061 1.3E-07 44.3 9.6 52 248-299 55-107 (109)
75 PRK11431 multidrug efflux syst 97.2 0.0013 2.8E-08 47.4 6.0 69 78-146 32-101 (105)
76 COG2076 EmrE Membrane transpor 97.1 0.0014 3.1E-08 46.8 5.6 69 78-146 33-102 (106)
77 PF04657 DUF606: Protein of un 97.1 0.017 3.6E-07 44.1 11.6 122 19-144 12-138 (138)
78 COG4975 GlcU Putative glucose 97.0 0.00021 4.5E-09 58.5 0.9 240 39-299 28-284 (288)
79 COG3238 Uncharacterized protei 97.0 0.018 3.9E-07 44.0 10.9 139 154-301 4-147 (150)
80 PRK10452 multidrug efflux syst 97.0 0.0078 1.7E-07 44.5 8.6 55 248-302 50-105 (120)
81 COG2076 EmrE Membrane transpor 96.9 0.006 1.3E-07 43.6 7.1 55 248-302 50-105 (106)
82 KOG2234 Predicted UDP-galactos 96.8 0.049 1.1E-06 47.4 13.2 145 155-299 15-163 (345)
83 PRK11431 multidrug efflux syst 96.8 0.0052 1.1E-07 44.3 6.2 53 248-300 49-102 (105)
84 PF00893 Multi_Drug_Res: Small 96.7 0.0039 8.5E-08 44.1 5.0 59 80-138 34-93 (93)
85 PF04142 Nuc_sug_transp: Nucle 96.7 0.0043 9.2E-08 52.3 6.0 72 230-301 19-90 (244)
86 KOG1441 Glucose-6-phosphate/ph 96.5 0.0049 1.1E-07 53.5 5.6 139 7-146 162-306 (316)
87 TIGR00803 nst UDP-galactose tr 96.4 0.041 9E-07 45.6 10.3 67 78-144 155-221 (222)
88 PF05653 Mg_trans_NIPA: Magnes 96.3 0.018 3.9E-07 50.1 8.0 117 152-298 4-120 (300)
89 PRK13499 rhamnose-proton sympo 96.3 0.039 8.4E-07 48.7 9.9 138 153-300 5-153 (345)
90 KOG1581 UDP-galactose transpor 96.1 0.12 2.6E-06 44.1 11.0 139 7-146 171-312 (327)
91 COG3238 Uncharacterized protei 95.7 0.4 8.8E-06 36.8 11.6 126 18-146 15-145 (150)
92 KOG4510 Permease of the drug/m 95.6 0.0037 7.9E-08 52.0 0.4 132 155-300 38-169 (346)
93 PF10639 UPF0546: Uncharacteri 95.6 0.019 4.2E-07 41.8 4.0 66 80-145 46-112 (113)
94 PF00893 Multi_Drug_Res: Small 94.9 0.057 1.2E-06 38.1 4.7 46 246-291 47-93 (93)
95 COG5070 VRG4 Nucleotide-sugar 92.9 1.8 3.9E-05 35.5 10.1 125 20-145 167-294 (309)
96 KOG1580 UDP-galactose transpor 91.5 0.54 1.2E-05 38.7 5.6 63 242-304 99-161 (337)
97 KOG1444 Nucleotide-sugar trans 91.3 1.2 2.6E-05 38.4 7.9 128 18-146 167-299 (314)
98 COG4975 GlcU Putative glucose 89.3 0.13 2.9E-06 42.5 0.5 65 71-136 206-270 (288)
99 KOG2765 Predicted membrane pro 89.1 3.1 6.8E-05 36.9 8.6 126 22-148 261-391 (416)
100 PF07857 DUF1632: CEO family ( 88.1 0.82 1.8E-05 38.6 4.4 127 156-300 1-134 (254)
101 PF04342 DUF486: Protein of un 87.9 5.9 0.00013 28.3 7.8 68 78-145 38-106 (108)
102 PF10639 UPF0546: Uncharacteri 87.3 1.2 2.5E-05 32.6 4.2 52 246-297 59-111 (113)
103 KOG4314 Predicted carbohydrate 85.7 0.32 7E-06 38.8 0.7 59 242-300 67-125 (290)
104 PF06379 RhaT: L-rhamnose-prot 83.6 22 0.00047 31.4 10.9 140 153-301 5-154 (344)
105 KOG2922 Uncharacterized conser 82.8 0.65 1.4E-05 40.1 1.3 118 151-298 17-134 (335)
106 KOG3912 Predicted integral mem 78.7 15 0.00032 31.5 7.9 64 236-299 94-157 (372)
107 PRK02237 hypothetical protein; 76.8 14 0.00031 26.6 6.2 45 103-147 61-105 (109)
108 PRK02237 hypothetical protein; 75.1 22 0.00047 25.6 6.8 47 255-301 60-106 (109)
109 PF02694 UPF0060: Uncharacteri 74.3 10 0.00022 27.2 5.0 47 255-301 58-104 (107)
110 PF05297 Herpes_LMP1: Herpesvi 66.5 1.9 4.1E-05 36.5 0.0 99 99-200 47-149 (381)
111 PF02694 UPF0060: Uncharacteri 64.2 10 0.00023 27.1 3.3 44 104-147 60-103 (107)
112 KOG2766 Predicted membrane pro 60.9 3.5 7.6E-05 34.6 0.6 132 154-298 17-148 (336)
113 PF06379 RhaT: L-rhamnose-prot 59.9 1.3E+02 0.0027 26.8 20.0 226 73-299 71-339 (344)
114 KOG1623 Multitransmembrane pro 59.5 63 0.0014 27.2 7.7 56 152-207 125-180 (243)
115 COG1742 Uncharacterized conser 58.8 65 0.0014 23.1 8.4 44 105-148 62-105 (109)
116 KOG4831 Unnamed protein [Funct 57.7 15 0.00034 26.2 3.2 70 75-145 53-123 (125)
117 PF04342 DUF486: Protein of un 54.6 7.8 0.00017 27.7 1.4 29 269-297 77-105 (108)
118 KOG1442 GDP-fucose transporter 51.9 1.2E+02 0.0027 26.1 8.1 108 39-146 215-326 (347)
119 PF00909 Ammonium_transp: Ammo 44.5 2.5E+02 0.0054 25.6 18.1 65 139-205 259-325 (399)
120 COG4657 RnfA Predicted NADH:ub 40.9 60 0.0013 25.3 4.3 41 138-178 115-155 (193)
121 COG1742 Uncharacterized conser 36.9 66 0.0014 23.0 3.8 47 257-303 61-107 (109)
122 PF08693 SKG6: Transmembrane a 34.8 27 0.00058 20.2 1.3 19 286-304 21-39 (40)
123 PF06123 CreD: Inner membrane 33.8 3.9E+02 0.0084 24.8 11.3 57 121-179 317-375 (430)
124 PF07168 Ureide_permease: Urei 32.8 98 0.0021 27.0 4.8 133 162-299 3-145 (336)
125 KOG1582 UDP-galactose transpor 31.6 3.4E+02 0.0074 23.4 7.7 55 96-150 281-335 (367)
126 PF05961 Chordopox_A13L: Chord 30.7 40 0.00088 21.9 1.7 20 284-303 6-25 (68)
127 PF09964 DUF2198: Uncharacteri 30.3 1.7E+02 0.0037 19.5 5.7 52 124-178 17-68 (74)
128 PF06946 Phage_holin_5: Phage 28.2 2.1E+02 0.0047 20.0 6.7 29 118-146 21-49 (93)
129 PRK11715 inner membrane protei 27.5 5E+02 0.011 24.1 11.4 56 122-179 324-381 (436)
130 PF08627 CRT-like: CRT-like; 27.1 2.4E+02 0.0053 21.0 5.4 51 7-58 56-106 (130)
131 PF03729 DUF308: Short repeat 26.9 1.7E+02 0.0037 18.5 5.4 28 133-160 2-29 (72)
132 KOG4831 Unnamed protein [Funct 24.9 1.6E+02 0.0035 21.2 4.0 53 246-298 70-123 (125)
133 PF15055 DUF4536: Domain of un 24.2 53 0.0012 19.8 1.4 21 285-305 8-28 (47)
134 TIGR01167 LPXTG_anchor LPXTG-m 23.6 61 0.0013 17.4 1.5 13 281-293 11-23 (34)
135 PHA03049 IMV membrane protein; 22.6 71 0.0015 20.7 1.8 22 283-304 5-26 (68)
136 PF09930 DUF2162: Predicted tr 22.2 4.6E+02 0.01 21.8 12.0 76 70-145 97-175 (224)
137 KOG1583 UDP-N-acetylglucosamin 21.5 49 0.0011 28.4 1.1 43 259-301 96-138 (330)
138 PF05545 FixQ: Cbb3-type cytoc 21.0 78 0.0017 19.0 1.7 18 287-304 17-34 (49)
139 PF04550 Phage_holin_2: Phage 20.7 3E+02 0.0065 19.1 5.7 57 119-178 22-84 (89)
No 1
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=9.3e-38 Score=272.19 Aligned_cols=293 Identities=27% Similarity=0.369 Sum_probs=240.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHHHHH
Q 021864 8 FTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCI 87 (306)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (306)
+..+.+..|+..|+.+++.||+.+++ +++|.++++.|+..+.+...+. +..+.+++++ .++++++..++.|++++.
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l~~--~~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~g~~~~~ 77 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLLNV--FPYPYFKTLISLAVGSLYCLLS-WSSGLPKRLK-ISSALLKLLLPVAIVHTI 77 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh--CChhHHHHHHHHHHHHHHHHHH-HHhCCCCCCC-CCHHHHHHHHHHHHHHHH
Confidence 45678899999999999999999987 8889999999999988776554 2111122222 346689999999999999
Q ss_pred HHhhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccCCCcchHHHHHHHHHHHHHH
Q 021864 88 SVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAAR 167 (306)
Q Consensus 88 ~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~~~~~~~~G~~~~l~a~~~~ 167 (306)
+..+.|.|++|++++++++++++.|+++.+++++++|||++++++.++.++++|+++...+|.+.+..|++++++|++++
T Consensus 78 ~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~ 157 (302)
T TIGR00817 78 GHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITF 157 (302)
T ss_pred HHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999887777777788999999999999
Q ss_pred HHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchh-hhcc--ccchhHHHH-HHHhhH-HHHHHH
Q 021864 168 ALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGIT-LALA--RDDVKIIWY-LLFNSA-LAYFVN 242 (306)
Q Consensus 168 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~-~~~~~~-~~~~~~ 242 (306)
|.+.++.||.. +++++|+.+.+.|++..+.+.+.|.....|++..... .... .......+. ....+. +...++
T Consensus 158 a~~~v~~k~~~--~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (302)
T TIGR00817 158 VSRNIFSKKAM--TIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQ 235 (302)
T ss_pred HHHHHHHHHhh--ccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHH
Confidence 99999999987 3347899999999999999999999876665432111 0110 011111222 223333 333456
Q ss_pred HHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhhccccC
Q 021864 243 LTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAKKRSK 306 (306)
Q Consensus 243 ~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~~~~~ 306 (306)
...+.++++.||.++++...++|++++++|++++||++|..+++|.++++.|+.+|++.|.||+
T Consensus 236 ~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~ 299 (302)
T TIGR00817 236 QVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKP 299 (302)
T ss_pred HHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCc
Confidence 6777899999999999999999999999999999999999999999999999999998766653
No 2
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=7.7e-37 Score=270.14 Aligned_cols=293 Identities=24% Similarity=0.349 Sum_probs=247.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccch-hhhhHHHHHHHHHH
Q 021864 6 KLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIR-SRLQFLKISALSFV 84 (306)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 84 (306)
+++....++.|+.+|+..++.||+++++ +|+|++++++|++++.+...+.. ..+.+++++.. ++.+++..++.|++
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~llp~gl~ 123 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYW-ATGFRKIPRIKSLKLFLKNFLPQGLC 123 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHH-HhCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 5788999999999999999999999998 88899999999999987755442 22223333332 45678899999999
Q ss_pred HHHHHhhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccCCCcchHHHHHHHHHHH
Q 021864 85 FCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAAT 164 (306)
Q Consensus 85 ~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~~~~~~~~G~~~~l~a~ 164 (306)
+.......+.|++++++++++++++++|+++++++++++|||++++++.+++.+++|+.+.+.+|.+++..|++++++|+
T Consensus 124 ~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~ 203 (350)
T PTZ00343 124 HLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSN 203 (350)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHH
Confidence 88777778899999999999999999999999999999999999999999999999999999888888889999999999
Q ss_pred HHHHHHHHHHHHHhccCC---CCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhh-----hcccc-chhHHHHHHHhh
Q 021864 165 AARALKSVLQGILLSSEG---EKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITL-----ALARD-DVKIIWYLLFNS 235 (306)
Q Consensus 165 ~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~ 235 (306)
+++|+++++.|+..++++ +++++.+...++...+.+.++|.....|++...... +.... .....+.+..++
T Consensus 204 ~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~ 283 (350)
T PTZ00343 204 LGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSG 283 (350)
T ss_pred HHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHH
Confidence 999999999999885432 257788888888999999999998767654321111 01111 123344566677
Q ss_pred HHHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhh
Q 021864 236 ALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEA 301 (306)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~ 301 (306)
+..+.+|.+.+.++++++|+++++.+++||+++++.|++++||++|+.+++|.++++.|+++|++.
T Consensus 284 l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 284 VWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred HHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence 888888999999999999999999999999999999999999999999999999999999999865
No 3
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=1e-37 Score=265.41 Aligned_cols=296 Identities=46% Similarity=0.700 Sum_probs=262.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHHHH
Q 021864 7 LFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFC 86 (306)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (306)
......+..|+++++..++.||++++.+++|+|++++..+...+.+... ..+..+..|.++..++.+++..++.+++++
T Consensus 16 ~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~-v~~~l~~~~~~~~~~~~~~~~llpl~~~~~ 94 (316)
T KOG1441|consen 16 LRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALL-VIKVLKLVPPSKISSKLPLRTLLPLGLVFC 94 (316)
T ss_pred HHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHH-HHHHhcCCCCCccccccchHHHHHHHHHHH
Confidence 5667778999999999999999999988899999999997776666554 445566666666556778999999999999
Q ss_pred HHHhhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccCCCcchHHHHHHHHHHHHH
Q 021864 87 ISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAA 166 (306)
Q Consensus 87 ~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~~~~~~~~G~~~~l~a~~~ 166 (306)
++..+.|.|+.+++++++|.+|+++|+++.++++++.+|+.++..+.++..++.|+.+.+.+|.++|..|.+.++++.+.
T Consensus 95 ~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~~ 174 (316)
T KOG1441|consen 95 ISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNLA 174 (316)
T ss_pred HHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHH-HHHHHhcccccchhhhccccchhHHHHHHHhhHHHHHHHHHH
Q 021864 167 RALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLL-PATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTN 245 (306)
Q Consensus 167 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (306)
.++++++.|+.++++++++|+.+++.|+.+.+.+.++ |.....|++.. .-.....++..... .++..++++..|...
T Consensus 175 ~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~sv~~f~~Nls~ 252 (316)
T KOG1441|consen 175 FALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-VGFLTAPWFVTFLI-LLLNSVLAFLLNLSA 252 (316)
T ss_pred HHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-eeeeccccchhhHH-HHHHHHHHHHHHHHH
Confidence 9999999999998778999999999999999999999 88877776664 21122233334333 344449999999999
Q ss_pred HHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhhcccc
Q 021864 246 FLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAKKRS 305 (306)
Q Consensus 246 ~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~~~~ 305 (306)
|.++.+++|+++++.+.+|.++.++.|+++|+|+.|+.+..|+++.+.|+.+|++.++|+
T Consensus 253 f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~ 312 (316)
T KOG1441|consen 253 FLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKE 312 (316)
T ss_pred HHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999999999999999999999999999999999999999887765
No 4
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.97 E-value=1.1e-28 Score=217.35 Aligned_cols=282 Identities=16% Similarity=0.176 Sum_probs=210.3
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHHHHHHHhhhhh
Q 021864 15 AWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNV 94 (306)
Q Consensus 15 ~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (306)
..=....++..+.|..++. |++ |..+.++|+..+.+++.++...++++++.+...++++......+++....+.+.+.
T Consensus 20 ~~q~~~~~~~~~~k~a~~~-G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~~~ 97 (358)
T PLN00411 20 ATETSVVGISTLFKVATSK-GLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITGYI 97 (358)
T ss_pred HHHHHHHHHHHHHHHHHHC-CCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3335666777788999965 788 89999999999998888776654432222222344566676677776567778999
Q ss_pred cccccchhHHHHhhhhhHHHHHHHHHHH------hcceecccchhhhhhhhhhhhhhccC-CC-----------------
Q 021864 95 SLRFLPVSFNQAVGATTPFFTAVFAYLM------TLKREAWLTYVTLIPVVTGVIIASGG-EP----------------- 150 (306)
Q Consensus 95 al~~~~~~~~~~i~~~~pv~~~l~~~~~------~~~~~~~~~~~~i~~~~~G~~l~~~~-~~----------------- 150 (306)
|++|++++.++++.++.|+++.++++++ +|||++++|++++.++++|+.++... +.
T Consensus 98 gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~ 177 (358)
T PLN00411 98 GIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLS 177 (358)
T ss_pred HHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccc
Confidence 9999999999999999999999999999 59999999999999999999976631 10
Q ss_pred ------cch-HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCh-HHHHHHHHHHHHHHHHHHHHHhcccccchhhhccc
Q 021864 151 ------SFH-LFGFLMCIAATAARALKSVLQGILLSSEGEKLNS-MNLLLYMAPIAVVLLLPATLIMEKNVVGITLALAR 222 (306)
Q Consensus 151 ------~~~-~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (306)
..+ ..|+.+.++++++||.|++++|+.. .++++ ...+.++...+.+...+.....++..... ....
T Consensus 178 ~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~----~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~ 251 (358)
T PLN00411 178 PPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIM----SEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSV--WIIH 251 (358)
T ss_pred cccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH----HHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCccc--ceec
Confidence 112 4599999999999999999999987 23444 35566666666666655555544322111 0111
Q ss_pred cchhHHHHHHHhhHHHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhhc
Q 021864 223 DDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAK 302 (306)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~ 302 (306)
.+... +.++..++.....+..+++++++.+|.+++...+++|+++++++++++||++++.+++|.++++.|+.+.++.+
T Consensus 252 ~~~~~-~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~ 330 (358)
T PLN00411 252 FDITL-ITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGK 330 (358)
T ss_pred cchHH-HHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhh
Confidence 12221 12222333333455677789999999999999999999999999999999999999999999999999988765
Q ss_pred ccc
Q 021864 303 KRS 305 (306)
Q Consensus 303 ~~~ 305 (306)
+|+
T Consensus 331 ~~~ 333 (358)
T PLN00411 331 ANE 333 (358)
T ss_pred hhh
Confidence 543
No 5
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.97 E-value=6.6e-29 Score=216.19 Aligned_cols=283 Identities=21% Similarity=0.362 Sum_probs=231.8
Q ss_pred HHHHHHHHHHHHHHHhhhCC-CCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHHHHHHHhhhhh
Q 021864 16 WYSSNIGVLLLNKYLLSNYG-FRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNV 94 (306)
Q Consensus 16 ~~~~~~~~~~~~k~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (306)
.+++.....+..+.+.++.. .++|.++++.|+....+...+.....+ .+.+++..++.+++.++++.++..+.|.
T Consensus 8 i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (303)
T PF08449_consen 8 IFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK----FPKSRKIPLKKYAILSFLFFLASVLSNA 83 (303)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc----ccCCCcChHHHHHHHHHHHHHHHHHHHH
Confidence 34444445556666666533 347999999999999988776554433 1123455677788999999999999999
Q ss_pred cccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccCCC----cc------hHHHHHHHHHHH
Q 021864 95 SLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP----SF------HLFGFLMCIAAT 164 (306)
Q Consensus 95 al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~~~----~~------~~~G~~~~l~a~ 164 (306)
|++|+|.++.++.|++.|+++++++.+++|||++++|+.+++++++|+++...+|. +. ...|+++.+++.
T Consensus 84 al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl 163 (303)
T PF08449_consen 84 ALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSL 163 (303)
T ss_pred HHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998874432 11 123999999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHh--cccccchhhhccccchhHHHHHHHhhHHHHHHH
Q 021864 165 AARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIM--EKNVVGITLALARDDVKIIWYLLFNSALAYFVN 242 (306)
Q Consensus 165 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (306)
++.|.+.+++|+.. ++++.++++.+.|.+.++.+..++..... +..... .......+..+..+...++.++..+
T Consensus 164 ~~~a~~~~~qe~~~--~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~--~~f~~~~p~~~~~l~~~s~~~~~g~ 239 (303)
T PF08449_consen 164 LLDAFTGVYQEKLF--KKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSA--IRFISAHPSVLLYLLLFSLTGALGQ 239 (303)
T ss_pred HHHHHHHHHHHHHH--HHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHH--HHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 56788999999999999999888887662 222211 1222233445666777888888877
Q ss_pred HHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhhccccC
Q 021864 243 LTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAKKRSK 306 (306)
Q Consensus 243 ~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~~~~~ 306 (306)
...+.++++.||.+.++..++|.+++++++..++||++++.+++|.++++.|..+|++.++|||
T Consensus 240 ~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~ 303 (303)
T PF08449_consen 240 FFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN 303 (303)
T ss_pred HHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence 7778899999999999999999999999999999999999999999999999999999998876
No 6
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.97 E-value=1.3e-27 Score=207.24 Aligned_cols=285 Identities=18% Similarity=0.181 Sum_probs=216.3
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHH
Q 021864 1 MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISA 80 (306)
Q Consensus 1 M~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (306)
|+-|+-....+........+.......|...++ .+ |..++++|+..+.+++.+....+|++ . +++++++....
T Consensus 1 ~~~~~~~~~~~~~~~~~~iWg~~~~~~K~~~~~--~~-p~~~~~~R~~~a~l~ll~~~~~~~~~-~---~~~~~~~~~~~ 73 (292)
T PRK11272 1 MRFRQLLPLFGALFALYIIWGSTYLVIRIGVES--WP-PLMMAGVRFLIAGILLLAFLLLRGHP-L---PTLRQWLNAAL 73 (292)
T ss_pred CchHHHHHHHHHHHHHHHHHhhHHHHHHHHhcc--CC-HHHHHHHHHHHHHHHHHHHHHHhCCC-C---CcHHHHHHHHH
Confidence 455555566666666667777777789988875 77 99999999999998887765543322 1 23445666666
Q ss_pred HHHH-HHHHHhhhhhcc-cccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccC-CCcchHHHH
Q 021864 81 LSFV-FCISVVFGNVSL-RFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGG-EPSFHLFGF 157 (306)
Q Consensus 81 ~~~~-~~~~~~~~~~al-~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~-~~~~~~~G~ 157 (306)
.|.+ ....+.+.+.+. ++++++.++++.++.|+++.+++.+ +|||++++++.++.++++|+.++..+ +.+.+..|+
T Consensus 74 ~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~ 152 (292)
T PRK11272 74 IGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGA 152 (292)
T ss_pred HHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHH
Confidence 6665 456777888898 9999999999999999999999986 69999999999999999999988643 344567799
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhhHH
Q 021864 158 LMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSAL 237 (306)
Q Consensus 158 ~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (306)
.++++++++||.+.+..|+.. ++ ++...+.++...+...+.+.....+.+.. ...+...+..+...++.
T Consensus 153 l~~l~a~~~~a~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~i~~l~i~ 221 (292)
T PRK11272 153 ILILIASASWAFGSVWSSRLP----LP-VGMMAGAAEMLAAGVVLLIASLLSGERLT------ALPTLSGFLALGYLAVF 221 (292)
T ss_pred HHHHHHHHHHHHHHHHHHhcC----CC-cchHHHHHHHHHHHHHHHHHHHHcCCccc------ccCCHHHHHHHHHHHHH
Confidence 999999999999999999864 12 23445667777777777776644332210 01122223333333333
Q ss_pred -HHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhhccc
Q 021864 238 -AYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAKKR 304 (306)
Q Consensus 238 -~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~~~ 304 (306)
+...+..++.++++.++.+.+...+++|+++.+++++++||++++.+++|.++++.|+++.+++++|
T Consensus 222 ~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~~ 289 (292)
T PRK11272 222 GSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKYL 289 (292)
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3344566777899999999999999999999999999999999999999999999999998876655
No 7
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.97 E-value=1.2e-28 Score=202.30 Aligned_cols=292 Identities=21% Similarity=0.432 Sum_probs=255.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhh-cc--CccchhhhhHHHHHHHH
Q 021864 6 KLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKM-VP--MQTIRSRLQFLKISALS 82 (306)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~ 82 (306)
++..+.++..|+++|.+..+.+|+.-++ |++|.+++..|+++-..+.....+.+++ ++ +....|+++.++..|.+
T Consensus 14 rV~~L~lVl~yY~~Si~Ltf~~~~~~~~--f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPta 91 (349)
T KOG1443|consen 14 RVLTLALVLLYYFLSIGLTFYFKWLTKN--FHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTA 91 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcC--cCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhh
Confidence 4677788899999999999999998877 8889999999999998888776665443 22 23456888999999999
Q ss_pred HHHHHHHhhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccCCCcchHHHHHHHHH
Q 021864 83 FVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIA 162 (306)
Q Consensus 83 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~~~~~~~~G~~~~l~ 162 (306)
++-+++..+.|.+++|++.+.|++.|+++++|+.+++.++.-||++|.-...+.++.+|+.+.+.++.+++..|..++.+
T Consensus 92 lata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~ 171 (349)
T KOG1443|consen 92 LATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLA 171 (349)
T ss_pred hhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCC-CCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhh---cc--ccchhHHHHHHHhhH
Q 021864 163 ATAARALKSVLQGILLSSEG-EKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLA---LA--RDDVKIIWYLLFNSA 236 (306)
Q Consensus 163 a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~ 236 (306)
|+++.++++.+.|.+.++.+ .+-||...+.+..+...+.++|..+..|++....... .. .........+...+.
T Consensus 172 aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~g~ 251 (349)
T KOG1443|consen 172 ASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLGGL 251 (349)
T ss_pred HHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHHHH
Confidence 99999999999999997655 5678899999999999999999999999887642111 11 112234444667778
Q ss_pred HHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhh
Q 021864 237 LAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYS 299 (306)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~ 299 (306)
.++..-.+-+....+++..+.++.+..+.+.+.+++..+.+|+++...++|..++..|+..+.
T Consensus 252 laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~ 314 (349)
T KOG1443|consen 252 LAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR 314 (349)
T ss_pred HHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence 888888888999999999999999999999999999999999999999999999999999993
No 8
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1e-26 Score=193.75 Aligned_cols=294 Identities=21% Similarity=0.293 Sum_probs=250.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHHHH
Q 021864 7 LFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFC 86 (306)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (306)
....+..+.|..+|..+++.||+++++++||--+++...|.+.+.+.+... +..|-.+.++. +++..|.++|..+.+.
T Consensus 11 ~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~l-k~~~lv~~~~l-~~~~~kk~~P~~~lf~ 88 (314)
T KOG1444|consen 11 SSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVL-KRLGLVNFRPL-DLRTAKKWFPVSLLFV 88 (314)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH-HHhceeecCCc-ChHHHHHHccHHHHHH
Confidence 345777888999999999999999999776655566669999998877654 33332333333 4556788999999999
Q ss_pred HHHhhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccCCCcchHHHHHHHHHHHHH
Q 021864 87 ISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAA 166 (306)
Q Consensus 87 ~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~~~~~~~~G~~~~l~a~~~ 166 (306)
+.......+++|++++.+++++..+|+++++.+..++|+|+++.-+.++..+.+|......+|.+++..|..|.+...++
T Consensus 89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~ 168 (314)
T KOG1444|consen 89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLT 168 (314)
T ss_pred HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhcc-ccchhHHHHHHHhhHHHHHHHHHH
Q 021864 167 RALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALA-RDDVKIIWYLLFNSALAYFVNLTN 245 (306)
Q Consensus 167 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 245 (306)
.+.+.++.|+-. +..+.+.+.++.|.++.+...+.....++++++ +...+.. ..+...+..+.++|+++++.+++.
T Consensus 169 ~a~~~v~~kk~v--d~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~-~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s 245 (314)
T KOG1444|consen 169 TAAFVVYVKKSV--DSANLNKFGLVFYNNLLSLPPLLILSFITGELD-ALSLNFDNWSDSSVLVVMLLSCVMGFGISYTS 245 (314)
T ss_pred HHHHHHHHHHhh--ccccccceeEEeehhHHHHHHHHHHHHHhcchH-HHHhhcccccchhHHHHHHHHHHHHHHHHHHH
Confidence 999999999988 667888999999999999998888887776655 2222322 233456666899999999999999
Q ss_pred HHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhhcccc
Q 021864 246 FLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAKKRS 305 (306)
Q Consensus 246 ~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~~~~ 305 (306)
++|.+..|+.+.++++..+...+.+...++.|++.++...+|..+-+.|..+|++.+.|+
T Consensus 246 ~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~ 305 (314)
T KOG1444|consen 246 FLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRK 305 (314)
T ss_pred HHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhh
Confidence 999999999999999966677777777788888999999999999999999999876544
No 9
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.96 E-value=1.9e-26 Score=200.06 Aligned_cols=259 Identities=15% Similarity=0.130 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHHHHHHHhhhhhccc--
Q 021864 20 NIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLR-- 97 (306)
Q Consensus 20 ~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~-- 97 (306)
+.......|...++ +| |..+.+.|+..+.+++.++. + +++ .++++++..+..++.+..+..+.+.+++
T Consensus 16 Wg~~~~~~k~~~~~--~~-P~~~~~~R~~~a~l~l~~~~---~-~~~---~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~ 85 (295)
T PRK11689 16 WSTMVGLIRGVSES--LG-PVGGAAMIYSVSGLLLLLTV---G-FPR---LRQFPKRYLLAGGLLFVSYEICLALSLGYA 85 (295)
T ss_pred HHHHHHHHHHHHcc--CC-hHHHHHHHHHHHHHHHHHHc---c-ccc---cccccHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 34445578988876 77 99999999999988776542 1 111 1122334455555556677777777764
Q ss_pred --ccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccCCC-----------cchHHHHHHHHHHH
Q 021864 98 --FLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP-----------SFHLFGFLMCIAAT 164 (306)
Q Consensus 98 --~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~~~-----------~~~~~G~~~~l~a~ 164 (306)
+.+++.++++.++.|+++.+++++++|||++++++.++.++++|++++..++. +.+..|+.+.++|+
T Consensus 86 ~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa 165 (295)
T PRK11689 86 NTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGA 165 (295)
T ss_pred hccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHH
Confidence 46788889999999999999999999999999999999999999998874432 12356999999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhhHHHHHHHHH
Q 021864 165 AARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLT 244 (306)
Q Consensus 165 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (306)
++||.++++.||.. ++.++..... ..+...+.+.... ++... ...+...+..+...++.+...+..
T Consensus 166 ~~~A~~~v~~k~~~----~~~~~~~~~~---~~~~~~l~~~~~~-~~~~~------~~~~~~~~~~l~~~~~~t~~~~~l 231 (295)
T PRK11689 166 FIWAAYCNVTRKYA----RGKNGITLFF---ILTALALWIKYFL-SPQPA------MVFSLPAIIKLLLAAAAMGFGYAA 231 (295)
T ss_pred HHHHHHHHHHhhcc----CCCCchhHHH---HHHHHHHHHHHHH-hcCcc------ccCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999975 3345554322 2233333333322 22110 112222233333444555556777
Q ss_pred HHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhhc
Q 021864 245 NFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAK 302 (306)
Q Consensus 245 ~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~ 302 (306)
+++++++.++..++...+++|+++++++++++||++++.+++|.++++.|+.+....+
T Consensus 232 ~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~ 289 (295)
T PRK11689 232 WNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT 289 (295)
T ss_pred HHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence 7889999999999999999999999999999999999999999999999987765433
No 10
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.96 E-value=1.3e-26 Score=200.19 Aligned_cols=277 Identities=15% Similarity=0.211 Sum_probs=220.3
Q ss_pred HHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHHHHHHHhhhhhccc
Q 021864 18 SSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLR 97 (306)
Q Consensus 18 ~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 97 (306)
.+..+....++.+-++ |.+.|.++++..+....++..+...+++.+++.....+.+++.++..+++...++.+.+.|++
T Consensus 23 l~~~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~ 101 (334)
T PF06027_consen 23 LCITGTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQ 101 (334)
T ss_pred HHHHhHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3344455566666665 888999999999987777665554444332211112234556667779999999999999999
Q ss_pred ccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccCC---------CcchHHHHHHHHHHHHHHH
Q 021864 98 FLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE---------PSFHLFGFLMCIAATAARA 168 (306)
Q Consensus 98 ~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~~---------~~~~~~G~~~~l~a~~~~a 168 (306)
|++.+.++++.++..+++.+++++++|+|+++.|++|++++++|+.++...| .+....|+++++.|+.+||
T Consensus 102 yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya 181 (334)
T PF06027_consen 102 YTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYA 181 (334)
T ss_pred cccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999877433 1235789999999999999
Q ss_pred HHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhhHHHHHHHHHHHHh
Q 021864 169 LKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLV 248 (306)
Q Consensus 169 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (306)
.++++.|+.. ++.|..+..+..+.++.++..+.....|..... ..+++.....+.+..+++.+..+...-..
T Consensus 182 ~~nV~~E~~v----~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~----~~~w~~~~~~~~v~~~~~lf~~y~l~p~~ 253 (334)
T PF06027_consen 182 VSNVLEEKLV----KKAPRVEFLGMLGLFGFIISGIQLAILERSGIE----SIHWTSQVIGLLVGYALCLFLFYSLVPIV 253 (334)
T ss_pred HHHHHHHHhc----ccCCHHHHHHHHHHHHHHHHHHHHHheehhhhh----ccCCChhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988 345788999999999999998888777765532 22334444445555555555555556667
Q ss_pred hcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhhcc
Q 021864 249 TKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAKK 303 (306)
Q Consensus 249 ~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~~ 303 (306)
+++.+|...++......+.+++++++++|+++++..++|.++++.|.++|+..++
T Consensus 254 l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~ 308 (334)
T PF06027_consen 254 LRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAES 308 (334)
T ss_pred HHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCC
Confidence 9999999999988889999999999999999999999999999999999986544
No 11
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.96 E-value=3.2e-26 Score=198.77 Aligned_cols=282 Identities=8% Similarity=0.072 Sum_probs=194.9
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCcc--chhhhhHHHH
Q 021864 1 MKSSSKLFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQT--IRSRLQFLKI 78 (306)
Q Consensus 1 M~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 78 (306)
|+.+++.+.......-...+.......|.. ++ .+ |..+.++|...+.+.+.+....+++++..+ .++++++...
T Consensus 1 ~~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~--~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (296)
T PRK15430 1 MDAKQTRQGVLLALAAYFIWGIAPAYFKLI-YY--VP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFML 76 (296)
T ss_pred CCchhhhhHHHHHHHHHHHHHHHHHHHHHh-cC--CC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHH
Confidence 333344444444444444445555566875 33 77 999999999999887665544332211100 1112223334
Q ss_pred HHHHHHHHHHHhhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccCCCcchHHHHH
Q 021864 79 SALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFL 158 (306)
Q Consensus 79 ~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~~~~~~~~G~~ 158 (306)
...++....++.+.+.|++++|++.++++.++.|+++.+++++++|||++++++.++.+++.|++++..++++.. .
T Consensus 77 ~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~~----~ 152 (296)
T PRK15430 77 AVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLP----I 152 (296)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCcc----H
Confidence 455666788899999999999999999999999999999999999999999999999999999998764433322 4
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhhHHH
Q 021864 159 MCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALA 238 (306)
Q Consensus 159 ~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (306)
++++++++||.|.+..|+.. +++..+......+..+.+.....+.. +... . .....+..........++.+
T Consensus 153 ~~l~aa~~~a~~~i~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~---~~~~~~~~~~~~~~~~g~~t 223 (296)
T PRK15430 153 IALGLAFSFAFYGLVRKKIA--VEAQTGMLIETMWLLPVAAIYLFAIA---DSST-S---HMGQNPMSLNLLLIAAGIVT 223 (296)
T ss_pred HHHHHHHHHHHHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHHHHc---cCCc-c---cccCCcHHHHHHHHHHHHHH
Confidence 68889999999999999864 22222334444455554443322211 1111 0 01111111222333344445
Q ss_pred HHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhh
Q 021864 239 YFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYS 299 (306)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~ 299 (306)
...+.+.+.++++.++..++...+++|+++.+++++++||++++.+++|+++++.|+.+..
T Consensus 224 ~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~ 284 (296)
T PRK15430 224 TVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV 284 (296)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 5667778889999999999999999999999999999999999999999999988877654
No 12
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.95 E-value=1.4e-25 Score=195.20 Aligned_cols=270 Identities=16% Similarity=0.203 Sum_probs=189.1
Q ss_pred HHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHH-HHHHHhhhhhccc
Q 021864 19 SNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFV-FCISVVFGNVSLR 97 (306)
Q Consensus 19 ~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~ 97 (306)
.+.......|...++ ++ |..+.++|+..+.+.+.+.. ++ ++ . .++.....++. ......+.+.+++
T Consensus 15 ~Wg~~~~~~k~~~~~--~~-p~~~~~~R~~~a~~~l~~~~--~~--~~--~----~~~~~~~~g~~~~~~~~~~~~~~~~ 81 (299)
T PRK11453 15 VWGLNFVVIKVGLHN--MP-PLMLAGLRFMLVAFPAIFFV--AR--PK--V----PLNLLLGYGLTISFGQFAFLFCAIN 81 (299)
T ss_pred HHhhhHHHHHHHHhc--CC-HHHHHHHHHHHHHHHHHHHh--cC--CC--C----chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444467888876 77 99999999998776554432 11 11 1 12233344444 3345556678888
Q ss_pred c-cchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccCC---CcchHHHHHHHHHHHHHHHHHHHH
Q 021864 98 F-LPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE---PSFHLFGFLMCIAATAARALKSVL 173 (306)
Q Consensus 98 ~-~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~~---~~~~~~G~~~~l~a~~~~a~~~v~ 173 (306)
+ .+++.+.++.++.|+++.+++++++|||+++++++++.++++|+.++..++ .+.+..|+.+.+.++++++.+.++
T Consensus 82 ~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~ 161 (299)
T PRK11453 82 FGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIF 161 (299)
T ss_pred hcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence 7 688999999999999999999999999999999999999999999887432 223457999999999999999999
Q ss_pred HHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhhHHH-HHHHHHHHHhhccc
Q 021864 174 QGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALA-YFVNLTNFLVTKHT 252 (306)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 252 (306)
.|+..++ ..+.+......+....+.+.........|++.. ......+.+...++.++..++++ ...+..++..+++.
T Consensus 162 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~ 239 (299)
T PRK11453 162 NKKIMSH-STRPAVMSLVVWSALIPIIPFFVASLILDGSAT-MIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRY 239 (299)
T ss_pred HHHHhcc-cCccchhHHHHHHHHHHHHHHHHHHHHhcCchh-hhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9997621 112223344455555554444333333343221 10111122333344444444333 34455667789999
Q ss_pred ccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhhcc
Q 021864 253 SALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAKK 303 (306)
Q Consensus 253 ~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~~ 303 (306)
++.+.+....++|+++.+++++++||+++..+++|.++++.|+.+..+.++
T Consensus 240 ~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 240 ETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence 999999999999999999999999999999999999999999998765443
No 13
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.95 E-value=7.6e-26 Score=193.26 Aligned_cols=254 Identities=16% Similarity=0.160 Sum_probs=196.4
Q ss_pred HHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHHHHHHHhhhhhcccccchh
Q 021864 23 VLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVS 102 (306)
Q Consensus 23 ~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~ 102 (306)
.....|+.+++ +.| |..+.+.|.+.+.+++.+.... + .++++..+.....++...+++.+.+.|++|++++
T Consensus 4 ~~~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~~-~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~ 74 (260)
T TIGR00950 4 TGVVIGQYLEG-QVP-LYFAVFRRLIFALLLLLPLLRR-R------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVG 74 (260)
T ss_pred hHHHHHHHHhc-CCC-HHHHHHHHHHHHHHHHHHHHHh-c------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 44568888876 345 8999999999888877654322 2 1223333444455555789999999999999999
Q ss_pred HHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 021864 103 FNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGG-EPSFHLFGFLMCIAATAARALKSVLQGILLSSE 181 (306)
Q Consensus 103 ~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~-~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~ 181 (306)
.++++.++.|+++.+++.+++|||+++++++++.++++|+.++..+ +.+.+..|+.+.++++++++.+.++.|+.. +
T Consensus 75 ~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~--~ 152 (260)
T TIGR00950 75 EAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLV--K 152 (260)
T ss_pred hhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHh--h
Confidence 9999999999999999999999999999999999999999987643 345567899999999999999999999987 2
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhhHH-HHHHHHHHHHhhcccccchhhhh
Q 021864 182 GEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSAL-AYFVNLTNFLVTKHTSALTLQVL 260 (306)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~ 260 (306)
+.+.++.....+....+.+.+.|.....+.+.. .+...+......+++ ....+..+++++++.++.+.+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~ 224 (260)
T TIGR00950 153 KEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQ--------ALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASIL 224 (260)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCC--------cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHH
Confidence 333334555556777888888777654432221 122222223333333 34556677889999999999999
Q ss_pred hhhhhHHHHhhhhhhcCccccccccchhHHHHHHH
Q 021864 261 GNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGV 295 (306)
Q Consensus 261 ~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~ 295 (306)
.+++|+++.+++++++||++++.+++|..+++.|+
T Consensus 225 ~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 225 ALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999886
No 14
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.94 E-value=2.6e-24 Score=186.55 Aligned_cols=271 Identities=14% Similarity=0.071 Sum_probs=195.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHHHH
Q 021864 7 LFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFC 86 (306)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (306)
.+.......-..++.......|+..++ +| |..+.++|++.+.+++.++... +++ +. ++++++..+..|++..
T Consensus 11 ~~~~~~~~la~~~~~~~~~~~K~~~~~--~~-~~~~~~~R~~~a~l~l~~~~~~--~~~--~~-~~~~~~~~~~~g~~~~ 82 (293)
T PRK10532 11 WLPILLLLIAMASIQSGASLAKSLFPL--VG-APGVTALRLALGTLILIAIFKP--WRL--RF-AKEQRLPLLFYGVSLG 82 (293)
T ss_pred chHHHHHHHHHHHHHhhHHHHHHHHHH--cC-HHHHHHHHHHHHHHHHHHHHhH--Hhc--cC-CHHHHHHHHHHHHHHH
Confidence 444444444444455555579999987 77 9999999999998887654322 111 11 2345666767777788
Q ss_pred HHHhhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccC---CCcchHHHHHHHHHH
Q 021864 87 ISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGG---EPSFHLFGFLMCIAA 163 (306)
Q Consensus 87 ~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~---~~~~~~~G~~~~l~a 163 (306)
..+.+.+.+++|+|++.+.++..+.|+++.+++ +||+.+. ..+.++++|+.++... ..+.+..|+++.+++
T Consensus 83 ~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~a 156 (293)
T PRK10532 83 GMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGA 156 (293)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCCCcccCChHHHHHHHHH
Confidence 888899999999999999999999999999887 3665544 4456678998876522 223456799999999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHH-HHHhhHHHHHHH
Q 021864 164 TAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWY-LLFNSALAYFVN 242 (306)
Q Consensus 164 ~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 242 (306)
++++|.+.+..|+.. ++.++... .+....+.+.+.|.....++.. ..+...+.. +....+.+...+
T Consensus 157 a~~~a~~~v~~r~~~----~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~--------~~~~~~~~~~l~lgv~~t~~~~ 223 (293)
T PRK10532 157 GACWAIYILSGQRAG----AEHGPATV-AIGSLIAALIFVPIGALQAGEA--------LWHWSILPLGLAVAILSTALPY 223 (293)
T ss_pred HHHHHHHHHHHHHHh----ccCCchHH-HHHHHHHHHHHHHHHHHccCcc--------cCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999986 23455554 4556667777776664432211 111122211 222222333445
Q ss_pred HHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhhccc
Q 021864 243 LTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAKKR 304 (306)
Q Consensus 243 ~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~~~ 304 (306)
..+++++++.++.+++...+++|+++.+++++++||++++.+++|.++++.|.+.+++..+|
T Consensus 224 ~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~ 285 (293)
T PRK10532 224 SLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRR 285 (293)
T ss_pred HHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence 56677999999999999999999999999999999999999999999999999998755443
No 15
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.91 E-value=1.8e-22 Score=174.13 Aligned_cols=265 Identities=13% Similarity=0.065 Sum_probs=180.5
Q ss_pred HHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHHHHHHHhhhhhccc
Q 021864 18 SSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLR 97 (306)
Q Consensus 18 ~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 97 (306)
.+.......+|...++ +++. ..++.....+.+.+....+..++..+..+++.+......+.....+..+.+.|++
T Consensus 11 ~~~a~~~~~~k~~~~~---~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 85 (281)
T TIGR03340 11 LMHAGWNLMAKSHADK---EPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYH 85 (281)
T ss_pred HHHHHHHHHHhhcCCc---hhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3334444566765554 2132 3555555555555544332112211222344455566667778889999999999
Q ss_pred ccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccCC-CcchHHHHHHHHHHHHHHHHHHHHHHH
Q 021864 98 FLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE-PSFHLFGFLMCIAATAARALKSVLQGI 176 (306)
Q Consensus 98 ~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~~-~~~~~~G~~~~l~a~~~~a~~~v~~~~ 176 (306)
+.|++..+.+.++.|+++.+++++++|||++++++.|+.+++.|+.++..++ .+.+..|+.++++++++++.|.+..|+
T Consensus 86 ~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~ 165 (281)
T TIGR03340 86 HADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKA 165 (281)
T ss_pred cCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccc
Confidence 9999999999999999999999999999999999999999999999876433 234567888999999999999998887
Q ss_pred HhccCCCCCChH----HHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhhHHHHHHHHHHHHhhccc
Q 021864 177 LLSSEGEKLNSM----NLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHT 252 (306)
Q Consensus 177 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (306)
.. ++.++. ....+..........+.....+... ....+...+......++.+...+..++.++++.
T Consensus 166 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~ 235 (281)
T TIGR03340 166 AA----LGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRS------MFPYARQILPSATLGGLMIGGAYALVLWAMTRL 235 (281)
T ss_pred cc----cchhcccccHHHHHHHHHHHHHHHHHHHHHHhccc------hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 53 222222 2222222221111111111111111 001112223334444555555667778899999
Q ss_pred ccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHH
Q 021864 253 SALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVIL 297 (306)
Q Consensus 253 ~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l 297 (306)
++...+...+++|+++.+++++++||+++..+++|.++++.|+.+
T Consensus 236 ~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 236 PVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred CceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 999999999999999999999999999999999999999999875
No 16
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.91 E-value=3.2e-24 Score=173.63 Aligned_cols=290 Identities=19% Similarity=0.275 Sum_probs=243.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh--CCCCchHHHHHHHHHHHHHHHHHHHHHHhhccC----cc-chhhhhHHHHHHHHHH
Q 021864 12 LVAAWYSSNIGVLLLNKYLLSN--YGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPM----QT-IRSRLQFLKISALSFV 84 (306)
Q Consensus 12 ~~~~~~~~~~~~~~~~k~~~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~ 84 (306)
....+..+++.+.+.||++++. ...+.|.+.++.|+++...+...+....++.|. ++ ..+-+..++..+.++.
T Consensus 32 ~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvV 111 (347)
T KOG1442|consen 32 AVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVV 111 (347)
T ss_pred hccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhe
Confidence 3445668899999999999997 445789999999999998887766554332211 11 1234567889999999
Q ss_pred HHHHHhhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccCC---CcchHHHHHHHH
Q 021864 85 FCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE---PSFHLFGFLMCI 161 (306)
Q Consensus 85 ~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~~---~~~~~~G~~~~l 161 (306)
+.....+.|.+++|.+++++++=+++.-+|+.+++++++|||-+.....++.+++.|.-+-.++| ++.++.|.++++
T Consensus 112 fi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~GvifGV 191 (347)
T KOG1442|consen 112 FILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGVIFGV 191 (347)
T ss_pred eeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999887 567789999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhhHHHHHH
Q 021864 162 AATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFV 241 (306)
Q Consensus 162 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (306)
.|+++-|+..++.|+..+ +.+-.-|.++.|++..+.+..+|...+.+.-+ +....+...+..+|....++|++++..
T Consensus 192 laSl~vAlnaiytkk~l~--~v~~~iw~lt~ynnv~a~lLflpll~lnge~~-~v~~~~~l~a~~Fw~~mtLsglfgF~m 268 (347)
T KOG1442|consen 192 LASLAVALNAIYTKKVLP--PVGDCIWRLTAYNNVNALLLFLPLLILNGEFQ-AVVGFPHLPAIKFWILMTLSGLFGFAM 268 (347)
T ss_pred HHHHHHHHHHHhhheecc--cccCeehhhHHHHHHHHHHHHHHHHHHcchHH-HHcCcccchHHHHHHHHHHHHHHHHHh
Confidence 999999999999998773 23334589999999999999999886554322 222222334556677789999999999
Q ss_pred HHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhhccc
Q 021864 242 NLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAKKR 304 (306)
Q Consensus 242 ~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~~~ 304 (306)
++.+.+-+|-+||++..+.++.|.+..++++..+++|.-+..-+-|-++++.|...|++.+++
T Consensus 269 gyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~ 331 (347)
T KOG1442|consen 269 GYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEH 331 (347)
T ss_pred hheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999975543
No 17
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.87 E-value=1.2e-19 Score=154.66 Aligned_cols=240 Identities=9% Similarity=0.003 Sum_probs=161.8
Q ss_pred HHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccC--cc---chhhhhHHHHHHHHHHHHHHHhh
Q 021864 17 YSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPM--QT---IRSRLQFLKISALSFVFCISVVF 91 (306)
Q Consensus 17 ~~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~ 91 (306)
...+.......|. .++ +| |..+.++|.+.+.+.+.+....+++++. ++ .++++.+......+++...+..+
T Consensus 11 ~~~wg~~~~~~k~-~~~--~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 86 (256)
T TIGR00688 11 SFLFGYMYYYSKL-LKP--LP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWL 86 (256)
T ss_pred HHHHHHHHHHHHH-hcc--CC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHH
Confidence 3444455556787 444 77 9999999999998876655433322111 11 11222233456677778899999
Q ss_pred hhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccCCCcchHHHHHHHHHHHHHHHHHH
Q 021864 92 GNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKS 171 (306)
Q Consensus 92 ~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~~~~~~~~G~~~~l~a~~~~a~~~ 171 (306)
.+.|++++++++++++.++.|+++.+++++++|||++++++.++.++++|++++..++.+.+ .+++++++++|.|.
T Consensus 87 ~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~~a~~~ 162 (256)
T TIGR00688 87 FIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFSFTAYG 162 (256)
T ss_pred HHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999997764333222 35788999999999
Q ss_pred HHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhhHHHHHHHHHHHHhhcc
Q 021864 172 VLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKH 251 (306)
Q Consensus 172 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (306)
+..|+..+ + +...... ..........+... .+++... ... .....+..+...++.+...+.+...++++
T Consensus 163 i~~~~~~~---~--~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~---~~~-~~~~~~~~l~~~g~~t~i~~~l~~~a~~~ 231 (256)
T TIGR00688 163 LIRKALKN---T--DLAGFCL-ETLSLMPVAIYYLL-QTDFATV---QQT-NPFPIWLLLVLAGLITGTPLLAFVIAANR 231 (256)
T ss_pred HHHhhcCC---C--CcchHHH-HHHHHHHHHHHHHH-HhccCcc---ccc-CchhHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99998651 1 2222111 11111111111111 1111100 000 11112333344445565667778889999
Q ss_pred cccchhhhhhhhhhHHHHhhhhhh
Q 021864 252 TSALTLQVLGNAKGAVAVVVSILI 275 (306)
Q Consensus 252 ~~~~~~s~~~~~~~v~~~~~~~~~ 275 (306)
.++...+...+++|+++.+++.+.
T Consensus 232 ~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 232 LPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998764
No 18
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.87 E-value=1.1e-20 Score=148.75 Aligned_cols=285 Identities=18% Similarity=0.263 Sum_probs=238.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHHHHHHH
Q 021864 10 FGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISV 89 (306)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (306)
...+..|+.+++.+...||++++..||+--+.+.+.|-+++.+.+.++ +..|-.+ . +..+.|.|++.++......
T Consensus 8 ~~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iL-k~l~~~~---f-R~t~aK~WfpiSfLLv~MI 82 (309)
T COG5070 8 LTASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLIL-KFLRLVE---F-RLTKAKKWFPISFLLVVMI 82 (309)
T ss_pred chHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHH-HHHhHhh---e-ehhhhhhhcCHHHHHHHHH
Confidence 455677899999999999999999888867888999999998877654 3332211 1 1334677889999999999
Q ss_pred hhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccCCCc--------chHHHHHHHH
Q 021864 90 VFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPS--------FHLFGFLMCI 161 (306)
Q Consensus 90 ~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~~~~--------~~~~G~~~~l 161 (306)
.....+++|++.+.+++.+.++.+.++....++.+.|++-.+..+.++++..-+....+|.+ .| .|..|..
T Consensus 83 yt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~ 161 (309)
T COG5070 83 YTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMF 161 (309)
T ss_pred HhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEe
Confidence 99999999999999999999999999999999999999999999999999988888777652 23 3899999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhhHHHHHH
Q 021864 162 AATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFV 241 (306)
Q Consensus 162 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (306)
..++..+.+-...|+.. +-.+......++|.++.+..+++...+..|+|.+...-+..+ ...+.+...+++++++.
T Consensus 162 ~NclssaafVL~mrkri--~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~--~d~l~am~ISgl~svgi 237 (309)
T COG5070 162 TNCLSSAAFVLIMRKRI--KLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLS--VDSLMAMFISGLCSVGI 237 (309)
T ss_pred hhhHhHHHHHHHHHHhh--cccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCC--hHHHHHHHHHHHHHhhh
Confidence 99999999999998866 334556678899999999999999999999888643222222 23345577899999999
Q ss_pred HHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhhccc
Q 021864 242 NLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAKKR 304 (306)
Q Consensus 242 ~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~~~ 304 (306)
.++.-||++-++..++++++.++.....+-|..+|||+.|...+..+.+=..+..+|..++.+
T Consensus 238 Sy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~ 300 (309)
T COG5070 238 SYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSK 300 (309)
T ss_pred hhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999988888888865443
No 19
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.86 E-value=7.2e-19 Score=152.35 Aligned_cols=270 Identities=20% Similarity=0.244 Sum_probs=188.4
Q ss_pred HHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHHHHHHHhhhhhc
Q 021864 16 WYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVS 95 (306)
Q Consensus 16 ~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 95 (306)
+...+.......|...++ ...+......|............. +++.++.+ ..++.++..+..++.......+.+.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (292)
T COG0697 15 WGLLWGLSFIALKLAVES--LDPFLFAAALRFLIAALLLLPLLL-LEPRGLRP-ALRPWLLLLLLALLGLALPFLLLFLA 90 (292)
T ss_pred HHHHHHHHHHHHHHHhcc--cCChHHHHHHHHHHHHHHHHHHHH-hhcccccc-cccchHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444445555543 232566666688888877332221 11111111 11223445666666688999999999
Q ss_pred ccccchhHHHHhhhhhHHHHHHHHH-HHhcceecccchhhhhhhhhhhhhhccCCCcch---HHHHHHHHHHHHHHHHHH
Q 021864 96 LRFLPVSFNQAVGATTPFFTAVFAY-LMTLKREAWLTYVTLIPVVTGVIIASGGEPSFH---LFGFLMCIAATAARALKS 171 (306)
Q Consensus 96 l~~~~~~~~~~i~~~~pv~~~l~~~-~~~~~~~~~~~~~~i~~~~~G~~l~~~~~~~~~---~~G~~~~l~a~~~~a~~~ 171 (306)
+++++++.++.+.++.|+++.+++. +++|||++++++.++...+.|+.++..++...+ ..|..+++.+++++|.+.
T Consensus 91 ~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~ 170 (292)
T COG0697 91 LKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYT 170 (292)
T ss_pred HhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999997 777999999999999999999999997665443 589999999999999999
Q ss_pred HHHHHHhccCCCCCChHHHHH-HHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhhHHHH-HHHHHHHHhh
Q 021864 172 VLQGILLSSEGEKLNSMNLLL-YMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAY-FVNLTNFLVT 249 (306)
Q Consensus 172 v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 249 (306)
+..|+.. +.++..... +..........+.. ..+.+ .......+......++.+. ......+...
T Consensus 171 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~ 236 (292)
T COG0697 171 ALVKRLS-----RLGPVTLALLLQLLLALLLLLLFF-LSGFG--------APILSRAWLLLLYLGVFSTGLAYLLWYYAL 236 (292)
T ss_pred HHHHHhc-----CCChHHHHHHHHHHHHHHHHHHHH-hcccc--------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999875 234444443 33331111111111 11111 1122223333444444444 3566677799
Q ss_pred cccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhhcc
Q 021864 250 KHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAKK 303 (306)
Q Consensus 250 ~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~~ 303 (306)
++.++...+.....+|+.+.+++++++||+++..+++|.++++.|+.+.+.+++
T Consensus 237 ~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~~~ 290 (292)
T COG0697 237 RLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLRAR 290 (292)
T ss_pred HhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcccc
Confidence 999999999999999999999999999999999999999999999999987633
No 20
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.85 E-value=8.6e-21 Score=150.65 Aligned_cols=259 Identities=17% Similarity=0.245 Sum_probs=210.1
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHHHHHHHhhhhhcccccchhHHHHhhhhhHHHH
Q 021864 36 FRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFT 115 (306)
Q Consensus 36 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~ 115 (306)
|.+...+.+.|+..-.+..-++...++..+. ++..-+.+..++.-|.++++..|.|++|.|-++..+-+++.|+.+
T Consensus 50 FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~----D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPV 125 (337)
T KOG1580|consen 50 FTFALALVFFQCTANTVFAKVLFLIRKKTEI----DNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPV 125 (337)
T ss_pred ehHHHHHHHHHHHHHHHHHHhheeecccccc----cCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcce
Confidence 5567889999999888877665444432222 222345677888899999999999999999999999999999999
Q ss_pred HHHHHHHhcceecccchhhhhhhhhhhhhhccCCCc-------chHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChH
Q 021864 116 AVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPS-------FHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSM 188 (306)
Q Consensus 116 ~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~~~~-------~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~ 188 (306)
.+++.++.+++.+|+++.++.++++|+++..+.+.+ ....|-++.+.+--..+.....++|+. ...+.+..
T Consensus 126 MilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrir--a~yq~~g~ 203 (337)
T KOG1580|consen 126 MILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIR--ASYQRTGT 203 (337)
T ss_pred eeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHH--HhhccCch
Confidence 999999999999999999999999999998866532 235789999999999999999999998 45667788
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhhHHHHHHHHHHHHhhcccccchhhhhhhhhhHHH
Q 021864 189 NLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVA 268 (306)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~ 268 (306)
.++.++++++.+.+....++. ++..... ....-.+..+|-+.+.++++...+++.|..+...||.+.|+..+.+..++
T Consensus 204 ~MM~~~NlwStL~Lg~g~lfT-GElweF~-yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFT 281 (337)
T KOG1580|consen 204 SMMFYTNLWSTLYLGAGLLFT-GELWEFF-YFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFT 281 (337)
T ss_pred hhHHHHHHHHHHHhhhhheeh-hhHHHHH-HHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHH
Confidence 999999999988776655443 3332111 12222345556677777888888888899999999999999999999999
Q ss_pred HhhhhhhcCccccccccchhHHHHHHHHHhhhhc
Q 021864 269 VVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAK 302 (306)
Q Consensus 269 ~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~ 302 (306)
++.+.++|+++++.+|++|.++++.|...=....
T Consensus 282 il~SVllf~npls~rQwlgtvlVF~aL~~D~~~G 315 (337)
T KOG1580|consen 282 ILISVLLFNNPLSGRQWLGTVLVFSALTADVVDG 315 (337)
T ss_pred HHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcC
Confidence 9999999999999999999999999987654433
No 21
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.85 E-value=3.5e-19 Score=147.04 Aligned_cols=278 Identities=17% Similarity=0.254 Sum_probs=224.9
Q ss_pred HHHHHHHHHHHHHHHhhh------CCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHHHHHHH
Q 021864 16 WYSSNIGVLLLNKYLLSN------YGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISV 89 (306)
Q Consensus 16 ~~~~~~~~~~~~k~~~~~------~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (306)
.++......+..+.+.++ ..|.+|.++.+.|-+++.+.......+.+.. ...++.++.+...++......
T Consensus 22 I~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~----~~~~apl~~y~~is~tn~~s~ 97 (327)
T KOG1581|consen 22 IYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKE----LSGVAPLYKYSLISFTNTLSS 97 (327)
T ss_pred HHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhccccc----CCCCCchhHHhHHHHHhhcch
Confidence 444445555554444432 3477899999999999999887665554432 233455677778899999999
Q ss_pred hhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccC---C-----C-cchHHHHHHH
Q 021864 90 VFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGG---E-----P-SFHLFGFLMC 160 (306)
Q Consensus 90 ~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~---~-----~-~~~~~G~~~~ 160 (306)
.+.+.|++|++-++..+-+++-.+.+++.+.++.++|++..+..+..++..|+.+.... + . +.++.|+.+.
T Consensus 98 ~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll 177 (327)
T KOG1581|consen 98 WCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLL 177 (327)
T ss_pred HHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999876622 1 1 3458899999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhhHHHHH
Q 021864 161 IAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYF 240 (306)
Q Consensus 161 l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (306)
...-++.++.+..++++. +..+++++.++.+.++++.+.........+.... ..+.....+...+-+.+.+.++..
T Consensus 178 ~~~L~fDgfTn~tQd~lf--~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~--av~F~~~hp~~~~Di~l~s~~gav 253 (327)
T KOG1581|consen 178 FGYLLFDGFTNATQDSLF--KKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLP--AVSFIKEHPDVAFDILLYSTCGAV 253 (327)
T ss_pred HHHHHHHhhHHhHHHHHh--ccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCch--HHHHHHcChhHHHHHHHHHHhhhh
Confidence 999999999999999999 6789999999999999998888766433333332 233334445566667777777877
Q ss_pred HHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhh
Q 021864 241 VNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEA 301 (306)
Q Consensus 241 ~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~ 301 (306)
.+...+..+++.|+.+.+...+.|.++++.++.+.+|++.+..|+.|..+++.|..+=...
T Consensus 254 GQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~ 314 (327)
T KOG1581|consen 254 GQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILL 314 (327)
T ss_pred hhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHH
Confidence 7777888999999999999999999999999999999999999999999988888765433
No 22
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.84 E-value=8.7e-20 Score=154.47 Aligned_cols=227 Identities=18% Similarity=0.215 Sum_probs=185.4
Q ss_pred hHHHHHHHHHHHHHHHhhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccCCC---
Q 021864 74 QFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP--- 150 (306)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~~~--- 150 (306)
..+..+..+.+.+.+++..|.|+.+++++..+++.+++-+|+..++.++..||+|+.|.+++.+.++|+++++.+|.
T Consensus 158 ~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~ 237 (416)
T KOG2765|consen 158 TAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQN 237 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccc
Confidence 44556666667889999999999999999999999999999999999999999999999999999999999985532
Q ss_pred -----cchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccch
Q 021864 151 -----SFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDV 225 (306)
Q Consensus 151 -----~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (306)
+....|.++++.+++.||.|.++.||-..+++++.|.....++.+++..+.+.|...+.+.-.. +.++.+ ...
T Consensus 238 ~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~-e~F~lP-~~~ 315 (416)
T KOG2765|consen 238 SDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGE-ERFELP-SST 315 (416)
T ss_pred ccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhcc-CcccCC-CCc
Confidence 2347899999999999999999999988654468888899999999999999988766543321 111111 111
Q ss_pred hHHHHHHHhhHHHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhhc
Q 021864 226 KIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAK 302 (306)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~ 302 (306)
.....+..+.+..+..-+.+.++.-.++|+.+++...+....+++.+.++-|.++|+.+++|...++.|.+..++..
T Consensus 316 q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~ 392 (416)
T KOG2765|consen 316 QFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS 392 (416)
T ss_pred eeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence 12222233334445566777788899999999999999999999999999999999999999999999999887643
No 23
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.84 E-value=1.5e-19 Score=151.19 Aligned_cols=213 Identities=19% Similarity=0.250 Sum_probs=170.5
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccCCC--
Q 021864 73 LQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP-- 150 (306)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~~~-- 150 (306)
++...+..++++|..++.+.+.++++++++++|+++++..+++++++++++|+|.+++||.++.+.++|+.++..++.
T Consensus 15 ~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 15 KDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 345556677999999999999999999999999999999999999999999999999999999999999998863210
Q ss_pred ---------------cchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 021864 151 ---------------SFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVG 215 (306)
Q Consensus 151 ---------------~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (306)
+....|....+.++++.++..++.||.+| +++.+.+..+...+..+.++.++.....++....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK--~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~ 172 (244)
T PF04142_consen 95 SDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLK--RSNVSLWIQNMQLYLFGILFNLLALLLSDGSAIS 172 (244)
T ss_pred cccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhc--ccchhHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 12358999999999999999999999994 4557788888888889888887776555543322
Q ss_pred hhhhccccchhHHHHHHHhhHHHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHH
Q 021864 216 ITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLT 291 (306)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~ 291 (306)
..-....++...+..+...++.+..... .+|+.+...-+....+..+.+.+.+..+||.++|....+|..++
T Consensus 173 ~~g~f~G~~~~~~~~i~~~a~gGllva~----v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 173 ESGFFHGYSWWVWIVIFLQAIGGLLVAF----VLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred cCCchhhcchHHHHHHHHHHHhhHHHHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 2112223333333334444444444333 78999999999999999999999999999999999999997653
No 24
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.84 E-value=3.3e-18 Score=145.12 Aligned_cols=287 Identities=15% Similarity=0.183 Sum_probs=221.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCCCc-hHHHHHHHHHHHHHHHHHHHHHHh----hccCccc-----hhhhhHHHHHH
Q 021864 11 GLVAAWYSSNIGVLLLNKYLLSNYGFRY-PIFLTMCHMTACSLLSYIAIAWMK----MVPMQTI-----RSRLQFLKISA 80 (306)
Q Consensus 11 ~~~~~~~~~~~~~~~~~k~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-----~~~~~~~~~~~ 80 (306)
+......+-+.++....++.-++.+.++ |.+..+.-.+...++......... +++.... ..+.+.....+
T Consensus 18 ~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~v 97 (345)
T KOG2234|consen 18 LSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSV 97 (345)
T ss_pred HHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHH
Confidence 3334444666677777777776654332 888888888888888776555432 1111111 11223444667
Q ss_pred HHHHHHHHHhhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccCC-----------
Q 021864 81 LSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE----------- 149 (306)
Q Consensus 81 ~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~~----------- 149 (306)
+++.|..+|.+.+.++.+.|++++++..++....++++..++++||.+++||.++++...|+.++..+.
T Consensus 98 Pa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~ 177 (345)
T KOG2234|consen 98 PALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESS 177 (345)
T ss_pred HHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCc
Confidence 788999999999999999999999999999999999999999999999999999999999999987211
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHH
Q 021864 150 PSFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIW 229 (306)
Q Consensus 150 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (306)
.+....|...++.+++.+++..++.|+++ |+.+.+.|..+...+..|.++.+......|+....+.-....++...|.
T Consensus 178 ~~n~~~G~~avl~~c~~SgfAgvYfEkiL--K~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~ 255 (345)
T KOG2234|consen 178 AQNPFLGLVAVLVACFLSGFAGVYFEKIL--KGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWL 255 (345)
T ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHHHH--hcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHH
Confidence 12347899999999999999999999999 5567788888888888888888877766666554422223444455555
Q ss_pred HHHHhhHHHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhhcc
Q 021864 230 YLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAKK 303 (306)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~~ 303 (306)
.++..++-|..... ..|+.+...-+....+..+++.+.++.++|.++|....+|..+++.++.+|+..+.
T Consensus 256 vVl~~a~gGLlvs~----v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~ 325 (345)
T KOG2234|consen 256 VVLLNAVGGLLVSL----VMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPA 325 (345)
T ss_pred HHHHHhccchhHHH----HHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCc
Confidence 55555655554444 68888988888889999999999999999999999999999999999999995443
No 25
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.82 E-value=3.2e-19 Score=144.58 Aligned_cols=289 Identities=20% Similarity=0.242 Sum_probs=230.0
Q ss_pred chHHHH-HHHHHHHHHHHHHHHHHHHhhhCCCC-chHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHH
Q 021864 6 KLFTFG-LVAAWYSSNIGVLLLNKYLLSNYGFR-YPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSF 83 (306)
Q Consensus 6 ~~~~~~-~~~~~~~~~~~~~~~~k~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (306)
|+...+ ++...++.-..+.++.+++++..+|. +-|.++..|+++-....++-... .+++ ++...||.+...+.
T Consensus 40 kw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~--~~~k---~r~iP~rtY~~la~ 114 (367)
T KOG1582|consen 40 KWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQL--IQTK---RRVIPWRTYVILAF 114 (367)
T ss_pred hhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEe--eccc---ceecchhHhhhhHh
Confidence 444444 44457788888999999999999985 78999999998765543332111 1111 23445677888888
Q ss_pred HHHHHHhhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccCC----CcchHHHHHH
Q 021864 84 VFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE----PSFHLFGFLM 159 (306)
Q Consensus 84 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~~----~~~~~~G~~~ 159 (306)
+..+...+.+-++.|++-++..+.+++..+.+.+.+.++.++|.++.++.+..+...|++.....| +++|..|+.+
T Consensus 115 ~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~m 194 (367)
T KOG1582|consen 115 LTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMM 194 (367)
T ss_pred hhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHH
Confidence 888999999999999999999999999999999999999999999999999999999999888555 4678899999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhhHHHH
Q 021864 160 CIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAY 239 (306)
Q Consensus 160 ~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (306)
.-+|-++.|.-...+|+.. +..+-++.++..|....|.+.++........-..++. .-.+.+.....+..+-+..++
T Consensus 195 IsgALl~DA~iGNvQEk~m--~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~-fcaehp~~tyGy~~~~s~~gy 271 (367)
T KOG1582|consen 195 ISGALLADAVIGNVQEKAM--KMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWT-FCAEHPVRTYGYAFLFSLAGY 271 (367)
T ss_pred HHHHHHHHHHhhHHHHHHH--hhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhH-HHHhCcHhHHHHHHHHHHHhH
Confidence 9999999999999999999 4456677899999999999988877755443332222 222333444455555555566
Q ss_pred HHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhhc
Q 021864 240 FVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAK 302 (306)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~ 302 (306)
.........++..|+..++...+.+...++++|+++|..++|....-|..++..|+++.-+++
T Consensus 272 lG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 272 LGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred hhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 555555557999999999999999999999999999999999999999999999999876554
No 26
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.80 E-value=7.3e-18 Score=137.40 Aligned_cols=287 Identities=18% Similarity=0.156 Sum_probs=209.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh-----CCCCchHHHHHHHHHHHHHHHHHHHHHHhhc--c-Cc--------cchhhhh
Q 021864 11 GLVAAWYSSNIGVLLLNKYLLSN-----YGFRYPIFLTMCHMTACSLLSYIAIAWMKMV--P-MQ--------TIRSRLQ 74 (306)
Q Consensus 11 ~~~~~~~~~~~~~~~~~k~~~~~-----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~--------~~~~~~~ 74 (306)
.+......+++..+...||.-+. .++++|+..+..-++.-+..+..+...+++. + .. ..++.-.
T Consensus 6 ~ls~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~ 85 (372)
T KOG3912|consen 6 FLSLIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN 85 (372)
T ss_pred hhhhhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC
Confidence 33444556677777788886552 4577888777766665433333332222211 1 00 0000011
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccCC-----
Q 021864 75 FLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE----- 149 (306)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~~----- 149 (306)
-+.+++.+++...+..+.+.++.+++++.+|+++....+|+.+++.-+++++++.+||.++....+|++++...|
T Consensus 86 p~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~ 165 (372)
T KOG3912|consen 86 PVLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVT 165 (372)
T ss_pred cceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeeccccc
Confidence 244667899999999999999999999999999999999999999999999999999999999999999886432
Q ss_pred -----CcchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhc----ccccc----h
Q 021864 150 -----PSFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIME----KNVVG----I 216 (306)
Q Consensus 150 -----~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~----~ 216 (306)
.+....|+.+.++|-+.-|.+.++.||.. ++.+.+|.+..+|.+.+|.+++........ ++... .
T Consensus 166 ~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l--~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g 243 (372)
T KOG3912|consen 166 DPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQL--KKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRG 243 (372)
T ss_pred CCccccccchhhhHHHHHHHHHHHHHHHHHHhhh--hhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCc
Confidence 23347899999999999999999999999 568899999999999999776654443321 11100 0
Q ss_pred -h------hhccccchhHHHHHHHhhHHH-HHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchh
Q 021864 217 -T------LALARDDVKIIWYLLFNSALA-YFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGY 288 (306)
Q Consensus 217 -~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~ 288 (306)
. +...+..+.. .......... ..+|+......+..|+.+-.++..++..+.++++.....|.++..|+.|.
T Consensus 244 ~~eD~~~~~~~~~e~p~l-~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGF 322 (372)
T KOG3912|consen 244 VLEDWGDAFAALQESPSL-AVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGF 322 (372)
T ss_pred chhhHHHHHHHhcCCchh-HHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHH
Confidence 0 0011111221 1111122222 24577777788999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh
Q 021864 289 SLTVMGVILYSE 300 (306)
Q Consensus 289 ~l~~~g~~l~~~ 300 (306)
++.+.|.++|+.
T Consensus 323 liLi~Gi~lY~~ 334 (372)
T KOG3912|consen 323 LILIMGIILYNQ 334 (372)
T ss_pred HHHHHHHHHHHH
Confidence 999999999983
No 27
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.80 E-value=6.7e-17 Score=139.64 Aligned_cols=255 Identities=16% Similarity=0.151 Sum_probs=181.5
Q ss_pred HHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHHHHHHHhhhhhccccc
Q 021864 20 NIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFL 99 (306)
Q Consensus 20 ~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~ 99 (306)
+.......|... +.+.++.. |...+..+........+ +|+ ...++.+..-+..|..+...+.+++.+.+++
T Consensus 13 wGs~g~~~k~~~---g~~~~~~~---~~~~g~l~~~~~~~~~~-~~~--~~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~ 83 (290)
T TIGR00776 13 WGSFVLINVKIG---GGPYSQTL---GTTFGALILSIAIAIFV-LPE--FWALSIFLVGLLSGAFWALGQINQFKSMRYM 83 (290)
T ss_pred HhhhHHHHhccC---CCHHHHHH---HHHHHHHHHHHHHHHHh-CCc--ccccHHHHHHHHHHHHHHhhhhhHHHHHHHH
Confidence 334444556544 46644443 56555555544433333 222 1224445556677777999999999999999
Q ss_pred chhHHHHhhh-hhHHHHHHHHHHHhcceecccc----hhhhhhhhhhhhhhccCCCc-------ch-HHHHHHHHHHHHH
Q 021864 100 PVSFNQAVGA-TTPFFTAVFAYLMTLKREAWLT----YVTLIPVVTGVIIASGGEPS-------FH-LFGFLMCIAATAA 166 (306)
Q Consensus 100 ~~~~~~~i~~-~~pv~~~l~~~~~~~~~~~~~~----~~~i~~~~~G~~l~~~~~~~-------~~-~~G~~~~l~a~~~ 166 (306)
+.+.+..+.+ +.|++..+++.+++|||.++++ ..++++++.|+++....+.+ .+ ..|..+++.++++
T Consensus 84 gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~l~sg~~ 163 (290)
T TIGR00776 84 GVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLLLMSTIG 163 (290)
T ss_pred hHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHHHHHHHH
Confidence 9999999998 8999999999999999999999 99999999999988743211 33 6799999999999
Q ss_pred HHHHHHHHHHHhccCCCCCChHHHH---HHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhhHHHHHHHH
Q 021864 167 RALKSVLQGILLSSEGEKLNSMNLL---LYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNL 243 (306)
Q Consensus 167 ~a~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (306)
++.|.+..|+. +.||.... .+....+.....+.. .+. . +......+.....++.....+.
T Consensus 164 y~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~-~--------~~~~~~~~~~~~~Gi~~~ia~~ 226 (290)
T TIGR00776 164 YLVYVVVAKAF------GVDGLSVLLPQAIGMVIGGIIFNLGH--ILA-K--------PLKKYAILLNILPGLMWGIGNF 226 (290)
T ss_pred HHHHHHHHHHc------CCCcceehhHHHHHHHHHHHHHHHHH--hcc-c--------chHHHHHHHHHHHHHHHHHHHH
Confidence 99999999974 25666653 333333333332222 100 0 0112222233335665555566
Q ss_pred HHHHhhc-ccccchhhhhhhhhhHHHHhhhhhhcCcccccccc----chhHHHHHHHHHhhh
Q 021864 244 TNFLVTK-HTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGM----LGYSLTVMGVILYSE 300 (306)
Q Consensus 244 ~~~~~~~-~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~----iG~~l~~~g~~l~~~ 300 (306)
.++...+ +.++.+.+..++++|+.+.+++++++||+.++.|+ +|.++++.|+.+...
T Consensus 227 ~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 227 FYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence 6667778 99999999999999999999999999999999999 999999999987653
No 28
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.79 E-value=2.3e-16 Score=130.36 Aligned_cols=278 Identities=12% Similarity=0.075 Sum_probs=207.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCcc--chhhhhHHHHHHHHHH
Q 021864 7 LFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQT--IRSRLQFLKISALSFV 84 (306)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 84 (306)
...++....-+..+....+..|.+.. .| +..+...|.+.+..++.......|+.+.-+ .++++.+......+..
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kll~~---~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l 81 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKLLEP---LP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL 81 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHcc---CC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence 44455555556666777778888764 45 889999999999988887666554322211 1222334556666777
Q ss_pred HHHHHhhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccCCCcchHHHHHHHHHHH
Q 021864 85 FCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAAT 164 (306)
Q Consensus 85 ~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~~~~~~~~G~~~~l~a~ 164 (306)
...+-..+..|.++..+-.+++=....|.+..+++.+++|||+++.|+++++++.+|+.......++.++....+ +
T Consensus 82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~l----a 157 (293)
T COG2962 82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALAL----A 157 (293)
T ss_pred HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH----H
Confidence 788888999999998888888888999999999999999999999999999999999998887777777654443 4
Q ss_pred HHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhhHHHHHHHHH
Q 021864 165 AARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLT 244 (306)
Q Consensus 165 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (306)
+.++.|...-|+ .++|+.+-.......-....+......+.... ...+.+.....+++..|.++...-.+
T Consensus 158 ~sf~~Ygl~RK~------~~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~----~~~~~~~~~~~LLv~aG~vTavpL~l 227 (293)
T COG2962 158 LSFGLYGLLRKK------LKVDALTGLTLETLLLLPVALIYLLFLADSGQ----FLQQNANSLWLLLVLAGLVTAVPLLL 227 (293)
T ss_pred HHHHHHHHHHHh------cCCchHHhHHHHHHHHhHHHHHHHHHHhcCch----hhhcCCchHHHHHHHhhHHHHHHHHH
Confidence 688888877655 35666665555544444433444433333221 11223445566677777777666566
Q ss_pred HHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhhc
Q 021864 245 NFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAK 302 (306)
Q Consensus 245 ~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~ 302 (306)
...+-++.+-.+.+...+++|....+++.+++||+++..+++..+.+-.|..+|..+.
T Consensus 228 f~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~ 285 (293)
T COG2962 228 FAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDG 285 (293)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 6668999999999999999999999999999999999999999999999999998653
No 29
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.77 E-value=1.5e-16 Score=128.07 Aligned_cols=249 Identities=14% Similarity=0.090 Sum_probs=193.9
Q ss_pred HHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHHHHHHHhhhhhcccccchhHHH
Q 021864 26 LNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQ 105 (306)
Q Consensus 26 ~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~ 105 (306)
+.|.++.. .. |.-+++.|...+.+++..+.+-.+ +...+++++....-|......|.+.|.+++.+|.+++.
T Consensus 30 ~Ak~LFP~--vG-~~g~t~lRl~~aaLIll~l~RPwr-----~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAV 101 (292)
T COG5006 30 FAKSLFPL--VG-AAGVTALRLAIAALILLALFRPWR-----RRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAV 101 (292)
T ss_pred HHHHHccc--cC-hhhHHHHHHHHHHHHHHHHhhHHH-----hccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhh
Confidence 46777776 33 899999999999988776544222 22356678889999999999999999999999999999
Q ss_pred HhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccCC---CcchHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 021864 106 AVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE---PSFHLFGFLMCIAATAARALKSVLQGILLSSEG 182 (306)
Q Consensus 106 ~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~~---~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~ 182 (306)
.+-.+.|+.+.+++. + +.++.+.+.+.+.|+.+..... .+.|+.|..+.+.+..||+.|.+..||..
T Consensus 102 AiEF~GPL~vA~~~s----R--r~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g---- 171 (292)
T COG5006 102 AIEFTGPLAVALLSS----R--RLRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAG---- 171 (292)
T ss_pred hhhhccHHHHHHHhc----c--chhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhc----
Confidence 999999998887762 2 2346677788889988776332 56789999999999999999999999976
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhhHHHH-HHHHHHHHhhcccccchhhhhh
Q 021864 183 EKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAY-FVNLTNFLVTKHTSALTLQVLG 261 (306)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~ 261 (306)
...|....+..-+..+.++.+|......++. -.++......+..++++- .-+..--.++++.++.+.++..
T Consensus 172 ~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~--------l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~Ll 243 (292)
T COG5006 172 RAEHGTAGVAVGMLVAALIVLPIGAAQAGPA--------LFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLL 243 (292)
T ss_pred ccCCCchHHHHHHHHHHHHHhhhhhhhcchh--------hcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHH
Confidence 2456677788888999999999885433322 122333333333344442 2344455589999999999999
Q ss_pred hhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhh
Q 021864 262 NAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSE 300 (306)
Q Consensus 262 ~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~ 300 (306)
.+||.++.+.+++++||.+|..|+.|++.++.+..=.++
T Consensus 244 SLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~l 282 (292)
T COG5006 244 SLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTL 282 (292)
T ss_pred HhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccc
Confidence 999999999999999999999999999999998774443
No 30
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.74 E-value=3.2e-17 Score=128.61 Aligned_cols=145 Identities=35% Similarity=0.635 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccC---CCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhcccc-----chhH
Q 021864 156 GFLMCIAATAARALKSVLQGILLSSE---GEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARD-----DVKI 227 (306)
Q Consensus 156 G~~~~l~a~~~~a~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 227 (306)
|.++++.|+++.|+++++.|+..+++ +++.++.++..+.++.+.+.++|..+..|++........... +...
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 78899999999999999999999542 368999999999999999999999988888774333221111 4466
Q ss_pred HHHHHHhhHHHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhh
Q 021864 228 IWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSE 300 (306)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~ 300 (306)
+..++.+++.++..+.+.+.+++++||++.++.+.+|.+..++.+++++||++|..+++|+++.+.|+.+|++
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 7778889999999999999999999999999999999999999999999999999999999999999999975
No 31
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.74 E-value=2.8e-17 Score=133.79 Aligned_cols=275 Identities=20% Similarity=0.306 Sum_probs=208.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHHHHHHHhhh
Q 021864 13 VAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFG 92 (306)
Q Consensus 13 ~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (306)
...+..|-+...+. +.+.+. +-..-..+++.|+++-.+--++.. .+....+++...|.+......+...+...
T Consensus 9 ~~vf~GCcsnvv~l-E~L~~~-~pgsgNLITFaqFlFia~eGlif~-----skf~~~k~kiplk~Y~i~V~mFF~vnv~N 81 (330)
T KOG1583|consen 9 SLVFGGCCSNVVFL-ELLVRN-EPGSGNLITFAQFLFIATEGLIFT-----SKFFTVKPKIPLKDYAITVAMFFIVNVTN 81 (330)
T ss_pred HHHHHhhhchHHHH-HHHHHh-CCCCeeehHHHHHHHHHHhceeee-----ccccccCCCCchhhhheehheeeeeeeec
Confidence 33344444444433 444443 112246888999877666544332 11112223445566766667778899999
Q ss_pred hhcccc-cchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhcc---CCC-------------c---c
Q 021864 93 NVSLRF-LPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG---GEP-------------S---F 152 (306)
Q Consensus 93 ~~al~~-~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~---~~~-------------~---~ 152 (306)
|.++++ ++.+..-+.++.+++...+.++++.|+|++.+|+.++.++.+|+++.+. +|. + .
T Consensus 82 N~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~ 161 (330)
T KOG1583|consen 82 NYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFW 161 (330)
T ss_pred cceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchH
Confidence 999999 9999999999999999999999999999999999999999999998862 111 0 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhh-----------cc
Q 021864 153 HLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLA-----------LA 221 (306)
Q Consensus 153 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~ 221 (306)
-..|+.+...|.+..|.-.+++|..+ ++++-|+-|.++|....+. |..++..++..+.... ..
T Consensus 162 w~iGi~lL~~al~~sa~mgiyqE~~Y--~kyGKh~~EalFytH~LsL----P~Flf~~~div~~~~~~~~se~~~~p~~g 235 (330)
T KOG1583|consen 162 WLIGIALLVFALLLSAYMGIYQETTY--QKYGKHWKEALFYTHFLSL----PLFLFMGDDIVSHWRLAFKSESYLIPLLG 235 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HHhcCChHHHHHHHHHhcc----chHHHhcchHHHHHHHHhcCcceeccccC
Confidence 24699999999999999999999999 4567789999999998874 4443333332211100 01
Q ss_pred ccchhHHHHHHHhhHHHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhh
Q 021864 222 RDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSE 300 (306)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~ 300 (306)
..-+..++++..+++.++.+.-..+....+++++++++.-++|.-++.++|...|++++|+..++|..++..|..+|..
T Consensus 236 ~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 236 FKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN 314 (330)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1234677788999999999988888889999999999999999999999999999999999999999999999999973
No 32
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.71 E-value=1.4e-18 Score=140.76 Aligned_cols=265 Identities=14% Similarity=0.170 Sum_probs=197.3
Q ss_pred HHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHHHHHHHhhhhhcc
Q 021864 17 YSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSL 96 (306)
Q Consensus 17 ~~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 96 (306)
++.+.++.+.+|-+.. + |..+.-.|+++-.....+....++ .+. ..++...++.+..|+..+.+....++|+
T Consensus 47 ~ff~~~~vv~t~~~e~----~-p~e~a~~r~l~~mlit~pcliy~~-~~v--~gp~g~R~~LiLRg~mG~tgvmlmyya~ 118 (346)
T KOG4510|consen 47 YFFNSCMVVSTKVLEN----D-PMELASFRLLVRMLITYPCLIYYM-QPV--IGPEGKRKWLILRGFMGFTGVMLMYYAL 118 (346)
T ss_pred HHHhhHHHhhhhhhcc----C-hhHhhhhhhhhehhhhheEEEEEe-eee--ecCCCcEEEEEeehhhhhhHHHHHHHHH
Confidence 5666666666666553 3 888888887766666555443333 221 1222233456677888888888999999
Q ss_pred cccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccC-----C---C------cchHHHHHHHHH
Q 021864 97 RFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGG-----E---P------SFHLFGFLMCIA 162 (306)
Q Consensus 97 ~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~-----~---~------~~~~~G~~~~l~ 162 (306)
+|++.+.+.+|..++|+++.++++.++||+.+..+..+....+.|+++...+ | + +.+..|...++.
T Consensus 119 ~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~ 198 (346)
T KOG4510|consen 119 MYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAIS 198 (346)
T ss_pred hhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHH
Confidence 9999999999999999999999999999999999999999999999988621 1 1 224568899999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhhHHHHHHH
Q 021864 163 ATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVN 242 (306)
Q Consensus 163 a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (306)
+++.-|.-.++.|++. ++.|....+.|....+.+..++.......++ . +....-+++++..|+.+++.+
T Consensus 199 s~lf~asvyIilR~iG----k~~h~~msvsyf~~i~lV~s~I~~~~ig~~~------l-P~cgkdr~l~~~lGvfgfigQ 267 (346)
T KOG4510|consen 199 SVLFGASVYIILRYIG----KNAHAIMSVSYFSLITLVVSLIGCASIGAVQ------L-PHCGKDRWLFVNLGVFGFIGQ 267 (346)
T ss_pred hHhhhhhHHHHHHHhh----ccccEEEEehHHHHHHHHHHHHHHhhcccee------c-CccccceEEEEEehhhhhHHH
Confidence 9999999999999987 3445555555666666665555443332222 1 122233445666677788888
Q ss_pred HHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhh
Q 021864 243 LTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSE 300 (306)
Q Consensus 243 ~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~ 300 (306)
......+++=-+...++..+...+++.++...+|||.+|++.++|+++++.+.++...
T Consensus 268 IllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~ 325 (346)
T KOG4510|consen 268 ILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVAL 325 (346)
T ss_pred HHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHH
Confidence 7777778887788888999999999999999999999999999999999888776543
No 33
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.65 E-value=2.1e-16 Score=127.38 Aligned_cols=264 Identities=14% Similarity=0.172 Sum_probs=208.2
Q ss_pred HHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHHHHHHHhhhhhccc
Q 021864 18 SSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLR 97 (306)
Q Consensus 18 ~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 97 (306)
.+..+..+.+.++-++ +.+.|..+++.....-.++-.+...+++ +. -+..|+.++..++...=+|.+.-.|.|
T Consensus 28 L~~t~~a~tss~la~k-~iN~Pt~QtFl~Y~LLalVY~~~~~fR~--~~----~~~~~~hYilla~~DVEaNy~vV~AyQ 100 (336)
T KOG2766|consen 28 LLITSTAFTSSELARK-GINAPTSQTFLNYVLLALVYGPIMLFRR--KY----IKAKWRHYILLAFVDVEANYFVVKAYQ 100 (336)
T ss_pred HHHHcchhhhHHHHhc-cCCCccHHHHHHHHHHHHHHhhHHHhhh--HH----HHHHHHHhhheeEEeecccEEEeeehh
Confidence 3444555667776654 5778999999988877777666655544 22 233455688888888888999999999
Q ss_pred ccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccCC--------CcchHHHHHHHHHHHHHHHH
Q 021864 98 FLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE--------PSFHLFGFLMCIAATAARAL 169 (306)
Q Consensus 98 ~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~~--------~~~~~~G~~~~l~a~~~~a~ 169 (306)
|++....+++-+...+.+.+++++++|.|..+.|+.|+..+.+|++.+..+| ++....|+.+.++++-+||.
T Consensus 101 yTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaV 180 (336)
T KOG2766|consen 101 YTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAV 180 (336)
T ss_pred hcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeee
Confidence 9999999999999999999999999999999999999999999999887443 33457899999999999999
Q ss_pred HHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhhHHHHHHHHHHHHhh
Q 021864 170 KSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVT 249 (306)
Q Consensus 170 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (306)
.|+..|.+. ++.|..+++...+++|.++..+- ++.|.... ....++.....++. ..++-+..+...-..+
T Consensus 181 SNv~EEflv----kn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~----~tl~w~~~i~~yl~-f~L~MFllYsl~pil~ 250 (336)
T KOG2766|consen 181 SNVSEEFLV----KNADRVELMGFLGLFGAIISAIQ-FIFERHHV----STLHWDSAIFLYLR-FALTMFLLYSLAPILI 250 (336)
T ss_pred ccccHHHHH----hcCcHHHHHHHHHHHHHHHHHHH-Hhhhccce----eeEeehHHHHHHHH-HHHHHHHHHHhhHHhe
Confidence 999999988 57788999999999999998877 45554332 23334333333333 4444454455555578
Q ss_pred cccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhh
Q 021864 250 KHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSE 300 (306)
Q Consensus 250 ~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~ 300 (306)
+..|+...++.-.....+++++ ..||-+.+|...+..+.+..|.++|.-
T Consensus 251 k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~ 299 (336)
T KOG2766|consen 251 KTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST 299 (336)
T ss_pred ecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence 9999999998888889999888 778889999999999999999999953
No 34
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.36 E-value=2.4e-12 Score=107.26 Aligned_cols=194 Identities=14% Similarity=0.117 Sum_probs=130.5
Q ss_pred cchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhc--------------------cCCC-------c
Q 021864 99 LPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS--------------------GGEP-------S 151 (306)
Q Consensus 99 ~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~--------------------~~~~-------~ 151 (306)
++.+.....++..|+++++.+....+||+++.|+++.++...|+.... .++. .
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 456777888888888888888888888888888888888888876421 1111 1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHH
Q 021864 152 FHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYL 231 (306)
Q Consensus 152 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (306)
....|....+.+.++.++..++.|+..|+ ++.+.+.........+.+.........+.... .............+.+
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 158 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKD--GDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLI-SNFGFFIGYPTAVWIV 158 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccC--CCCchHHHHHHHHHHHHHHHHHHHhhcccchh-hccCcccCCchHHHHH
Confidence 23668888999999999999999998743 33333444444444444432222222121111 1111111112222322
Q ss_pred HHhhHHHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHh
Q 021864 232 LFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILY 298 (306)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~ 298 (306)
... ......+..+++++.++.+.+.....+++++.+++.++|||++|..++.|..+++.|+++|
T Consensus 159 ~~~---~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 159 GLL---NVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHH---HHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 222 2233344566899999999999999999999999999999999999999999999998765
No 35
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.31 E-value=7e-12 Score=94.50 Aligned_cols=122 Identities=19% Similarity=0.350 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHH-HHHHHhhhhhcccc
Q 021864 20 NIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFV-FCISVVFGNVSLRF 98 (306)
Q Consensus 20 ~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~ 98 (306)
+......+|...++ +| |...+.+|+..+.+ ........++++..+ .+++++......+.+ ...+..+.+.++++
T Consensus 3 ~a~~~~~~k~~~~~--~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 77 (126)
T PF00892_consen 3 WAIYSVFSKKLLKK--IS-PLSITFWRFLIAGI-LLILLLILGRKPFKN-LSPRQWLWLLFLGLLGTALAYLLYFYALKY 77 (126)
T ss_pred eeeHHHHHHHHhcc--CC-HHHHHHHHHHHHHH-HHHHHHhhccccccC-CChhhhhhhhHhhccceehHHHHHHHHHHh
Confidence 34456678888887 77 99999999999997 555444444333222 233345555555666 68999999999999
Q ss_pred cchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhc
Q 021864 99 LPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS 146 (306)
Q Consensus 99 ~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~ 146 (306)
.+++.++.+..++|+++.+++++++||++++++++++.+++.|++++.
T Consensus 78 ~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 78 ISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998764
No 36
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.29 E-value=3e-11 Score=87.53 Aligned_cols=135 Identities=20% Similarity=0.222 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhh
Q 021864 156 GFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNS 235 (306)
Q Consensus 156 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (306)
..++++++++++++..++.|--. ++.||...+........+++.........++. ....+...+..++++|
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl----~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~-----~~~~~~k~~lflilSG 74 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGL----EGVDPDFATTIRTIVILIFLLIVLLVTGNWQA-----GGEIGPKSWLFLILSG 74 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----cccCccHHHHHHHHHHHHHHHHHHHhcCceec-----ccccCcceehhhhHHH
Confidence 35789999999999999999865 67899988888888888888777766655542 2223455566688888
Q ss_pred HHHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhh
Q 021864 236 ALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYS 299 (306)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~ 299 (306)
+.+....+++|++++.-.+..+....-..++++++++++++||++|..+++|.+++..|.++..
T Consensus 75 la~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 75 LAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 8887778889999999999999999999999999999999999999999999999999987653
No 37
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.20 E-value=1.2e-10 Score=84.40 Aligned_cols=124 Identities=15% Similarity=0.073 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHHHHHHHhhhhhccccc
Q 021864 20 NIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFL 99 (306)
Q Consensus 20 ~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~ 99 (306)
.....++.|.-+++ .+ |.+-+..|..+....+.......++.+.+....++.+......|+....+..+++.|++-.
T Consensus 15 a~L~~iF~KIGl~~--vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G 91 (140)
T COG2510 15 AGLTPIFAKIGLEG--VD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKG 91 (140)
T ss_pred HHHHHHHHHHhccc--cC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcC
Confidence 34455678998886 66 9999999999999988877666554443322345567778888888999999999999999
Q ss_pred chhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhc
Q 021864 100 PVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS 146 (306)
Q Consensus 100 ~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~ 146 (306)
+++.+.-+..++|+++.++++++++||+|..+++|+.++++|.++++
T Consensus 92 ~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 92 KASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred CcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 99999999999999999999999999999999999999999998875
No 38
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.15 E-value=1.4e-10 Score=85.84 Aligned_cols=107 Identities=15% Similarity=0.201 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhccC-ccchhhhhHHHHHHHHHHH-HHHHhhhhhcccccchhHHHHhhhhhHHHHHHHHHH
Q 021864 44 MCHMTACSLLSYIAIAWMKMVPM-QTIRSRLQFLKISALSFVF-CISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYL 121 (306)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~ 121 (306)
.+|...+.+.+......+++.+. .+..+++.+.++...+... ..++.+++.|+++.+ +.+..+.++.|+++.+++.+
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 46888888877776555433211 1112234455566656665 488999999999999 58889999999999999999
Q ss_pred HhcceecccchhhhhhhhhhhhhhccCCCc
Q 021864 122 MTLKREAWLTYVTLIPVVTGVIIASGGEPS 151 (306)
Q Consensus 122 ~~~~~~~~~~~~~i~~~~~G~~l~~~~~~~ 151 (306)
++|||++++++.++.++++|++++..+|.+
T Consensus 81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 81 FFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999999877754
No 39
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.12 E-value=7.1e-11 Score=92.11 Aligned_cols=222 Identities=13% Similarity=0.105 Sum_probs=157.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccCC--Cc
Q 021864 74 QFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGE--PS 151 (306)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~~--~~ 151 (306)
..++..|.+++..+++..+..|+..++++.++.+.++.--|+.+++++.+++|+.-.++++.++++.|++...+.| ..
T Consensus 52 ~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a 131 (290)
T KOG4314|consen 52 FFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHA 131 (290)
T ss_pred eeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhh
Confidence 4455678888899999999999999999999999999999999999999999999999999999999999888554 44
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHH--HHHHHHHHHHHHHHHHH-HHhcccccchh-hhccccchhH
Q 021864 152 FHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMN--LLLYMAPIAVVLLLPAT-LIMEKNVVGIT-LALARDDVKI 227 (306)
Q Consensus 152 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~ 227 (306)
.++.|+...+++++..|+|.|..|+.. ...+.+... +.......-.+...|.. +...+.. +.+ +...+++.
T Consensus 132 ~e~iGi~~AV~SA~~aAlYKV~FK~~i--GnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE-~~qsFA~~PWG~-- 206 (290)
T KOG4314|consen 132 DEIIGIACAVGSAFMAALYKVLFKMFI--GNANFGDAAHFMSCLGFFNLCFISFPALILAFTGVE-HLQSFAAAPWGC-- 206 (290)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHh--ccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchH-HHHHHhhCCchh--
Confidence 578999999999999999999999988 333433321 11111111122222222 1222211 111 11222211
Q ss_pred HHHHHHhhHHHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhhcc
Q 021864 228 IWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAKK 303 (306)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~~ 303 (306)
....+.....++......+....|...|+-......-....+.++-+-..|.....|.+++..|.++.-..+.
T Consensus 207 ---l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~d 279 (290)
T KOG4314|consen 207 ---LCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPED 279 (290)
T ss_pred ---hhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecccc
Confidence 1222223334455445567778888888877777777778888876667889999999999999988754443
No 40
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.11 E-value=3.8e-10 Score=84.92 Aligned_cols=124 Identities=25% Similarity=0.323 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhhHH-HHHHHH
Q 021864 165 AARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSAL-AYFVNL 243 (306)
Q Consensus 165 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 243 (306)
++||.+.+..|+.. ++.|+.....+....+.+ .++.....+... ....+...+......+.+ ....+.
T Consensus 1 ~~~a~~~~~~k~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (126)
T PF00892_consen 1 FSWAIYSVFSKKLL----KKISPLSITFWRFLIAGI-LLILLLILGRKP------FKNLSPRQWLWLLFLGLLGTALAYL 69 (126)
T ss_pred ceeeeHHHHHHHHh----ccCCHHHHHHHHHHHHHH-HHHHHHhhcccc------ccCCChhhhhhhhHhhccceehHHH
Confidence 46889999999987 458999999999999987 666665554433 111222222223333333 455667
Q ss_pred HHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhh
Q 021864 244 TNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYS 299 (306)
Q Consensus 244 ~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~ 299 (306)
..+.+.++.++...+.....+|+++.++++++++|++++.+++|.++++.|+.+.+
T Consensus 70 ~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 70 LYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 77889999999999999999999999999999999999999999999999998754
No 41
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.00 E-value=9.4e-08 Score=80.16 Aligned_cols=209 Identities=16% Similarity=0.162 Sum_probs=150.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhcccccchhHHHHhh-hhhHHHHHHHHHHHhcceecccch----hhhhhhhhhhhhhcc
Q 021864 73 LQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVG-ATTPFFTAVFAYLMTLKREAWLTY----VTLIPVVTGVIIASG 147 (306)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pv~~~l~~~~~~~~~~~~~~~----~~i~~~~~G~~l~~~ 147 (306)
..+...+..|++....+...+.|+++++++..--+. ..+.+.+.+.+.++++|-.+..++ .+++++++|+++-+.
T Consensus 43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~ 122 (269)
T PF06800_consen 43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY 122 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence 456677889999999999999999999999888777 778888999999999997766655 478888899988875
Q ss_pred CCCc--------chHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhh
Q 021864 148 GEPS--------FHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLA 219 (306)
Q Consensus 148 ~~~~--------~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (306)
+|.+ ....|....+++.+.|..|.+..|. .+.|++....=+..--.+..+...... ....
T Consensus 123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~------~~~~~~~~~lPqaiGm~i~a~i~~~~~-~~~~----- 190 (269)
T PF06800_consen 123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA------FHVSGWSAFLPQAIGMLIGAFIFNLFS-KKPF----- 190 (269)
T ss_pred ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh------cCCChhHhHHHHHHHHHHHHHHHhhcc-cccc-----
Confidence 4421 2356999999999999999999876 345777666544332222222222211 1110
Q ss_pred ccccchhHHHHHHHhhHHHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccc----cchhHHHHHHH
Q 021864 220 LARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTG----MLGYSLTVMGV 295 (306)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~----~iG~~l~~~g~ 295 (306)
..+. .+.-+..|++--..|..++...++.+....=.++.+..+++.+.+.++++|+=+..+ .+|.++++.|.
T Consensus 191 ~~k~----~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~ 266 (269)
T PF06800_consen 191 FEKK----SWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGA 266 (269)
T ss_pred cccc----hHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhh
Confidence 0011 112233444444556666777888998888899999999999999999999988664 46788887776
Q ss_pred HH
Q 021864 296 IL 297 (306)
Q Consensus 296 ~l 297 (306)
++
T Consensus 267 il 268 (269)
T PF06800_consen 267 IL 268 (269)
T ss_pred hc
Confidence 53
No 42
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.92 E-value=3.8e-08 Score=85.61 Aligned_cols=143 Identities=12% Similarity=0.075 Sum_probs=109.1
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHH
Q 021864 149 EPSFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKII 228 (306)
Q Consensus 149 ~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (306)
|.+....|..+.++++++|+...+..|.. ++++|.++..+....+.+++.+......+... . .....+....
T Consensus 2 ~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-----~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~-~--~~~~~~~~~~ 73 (296)
T PRK15430 2 DAKQTRQGVLLALAAYFIWGIAPAYFKLI-----YYVPADEILTHRVIWSFFFMVVLMSICRQWSY-L--KTLIQTPQKI 73 (296)
T ss_pred CchhhhhHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHH-H--HHHHcCHHHH
Confidence 44556789999999999999999999763 35899999999999998877776543321111 0 0000112222
Q ss_pred HHHHHhhHHHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhh
Q 021864 229 WYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYS 299 (306)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~ 299 (306)
......++.......+.++++++.++..+++..+..|++..++++++++|+++..+++|.++.+.|+.+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 74 FMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 22334444445567778889999999999999999999999999999999999999999999999998764
No 43
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.90 E-value=3.8e-08 Score=83.83 Aligned_cols=139 Identities=14% Similarity=0.113 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccc-hhhhccccchhHHHHHHH
Q 021864 155 FGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVG-ITLALARDDVKIIWYLLF 233 (306)
Q Consensus 155 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 233 (306)
.|..+.++++++|+...+..|. . .++||.++..+....+.+.+.+........... ......+. .........
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~----~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 75 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-L----KPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQK-RPLILSLLL 75 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-h----ccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCccc-chHHHHHHH
Confidence 3789999999999999999997 3 348999999999999988877665443221100 00111111 112233455
Q ss_pred hhHHHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhh
Q 021864 234 NSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYS 299 (306)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~ 299 (306)
.++.......+.+.++++.++.++++..+..|+++.++++++++|+++..+++|.++.+.|+.+..
T Consensus 76 ~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 76 CGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 555555667777889999999999999999999999999999999999999999999999988653
No 44
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.78 E-value=2e-07 Score=79.42 Aligned_cols=128 Identities=14% Similarity=0.039 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHH-HHHHH
Q 021864 11 GLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFV-FCISV 89 (306)
Q Consensus 11 ~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 89 (306)
.....-..+........|...++.+.+ +.....+++..+.+.+.+.....++ +. . .+...+...+..+.+ ...+.
T Consensus 131 ~~~l~a~~~~a~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~-~~-~-~~~~~~~~~~~~~~~~~~~~~ 206 (260)
T TIGR00950 131 LLGLGSGISFALGTVLYKRLVKKEGPE-LLQFTGWVLLLGALLLLPFAWFLGP-NP-Q-ALSLQWGALLYLGLIGTALAY 206 (260)
T ss_pred HHHHHHHHHHHHHHHHHhHHhhcCCch-HHHHHHHHHHHHHHHHHHHHHhcCC-CC-C-cchHHHHHHHHHHHHHHHHHH
Confidence 333334445555666788877663322 4556667888888877665444322 11 1 133344445555555 56889
Q ss_pred hhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhh
Q 021864 90 VFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGV 142 (306)
Q Consensus 90 ~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~ 142 (306)
.+++.++++.+++.++.+..++|+++.++++++++|+++..++.|..+++.|+
T Consensus 207 ~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 207 FLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999886
No 45
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.78 E-value=1.6e-07 Score=81.16 Aligned_cols=133 Identities=14% Similarity=0.123 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhhH
Q 021864 157 FLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSA 236 (306)
Q Consensus 157 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (306)
..+.+++++++|..++..|+..+ +.++. ..+....+.+.+.|......... .........+.....++.
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~----~~~~~--~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 71 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHAD----KEPDF--LWWALLAHSVLLTPYGLWYLAQV-----GWSRLPATFWLLLAISAV 71 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCC----chhHH--HHHHHHHHHHHHHHHHHHhcccC-----CCCCcchhhHHHHHHHHH
Confidence 56889999999999999998762 22332 35555556666666654321111 001112223334555666
Q ss_pred HHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhh
Q 021864 237 LAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSE 300 (306)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~ 300 (306)
....+..+.+.+.++.++...+...+..|+++.++++++++|+++..+++|.++.+.|+.+...
T Consensus 72 ~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 72 ANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 6667777778899999999999999999999999999999999999999999999999987653
No 46
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.63 E-value=1.2e-06 Score=75.85 Aligned_cols=217 Identities=15% Similarity=0.119 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHHhhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhc-cCC--Cc-ch
Q 021864 78 ISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS-GGE--PS-FH 153 (306)
Q Consensus 78 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~-~~~--~~-~~ 153 (306)
|+.+...+.++..+...|+.+.|.+..+-+.+...++..+++..++|||++++++.|+.+++.|..+.. ..+ .+ .+
T Consensus 53 W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t 132 (300)
T PF05653_consen 53 WWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHT 132 (300)
T ss_pred HHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCC
Confidence 334444577888999999999999999999999999999999999999999999999999999988655 211 11 10
Q ss_pred ---H------HH---HHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHH----HHHHhcccccchh
Q 021864 154 ---L------FG---FLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLP----ATLIMEKNVVGIT 217 (306)
Q Consensus 154 ---~------~G---~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 217 (306)
. .+ ....... ....+.....+|.. +.+...........+....+. .....+....+
T Consensus 133 ~~~l~~~~~~~~fl~y~~~~~~-~~~~L~~~~~~r~g-----~~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~-- 204 (300)
T PF05653_consen 133 LDELIALLSQPGFLVYFILVLV-LILILIFFIKPRYG-----RRNILVYISICSLIGSFTVLSAKAISILIKLTFSGD-- 204 (300)
T ss_pred HHHHHHHhcCcceehhHHHHHH-HHHHHHHhhcchhc-----ccceEEEEEEeccccchhhhHHHHHHHHHHHHhcCc--
Confidence 0 01 1111111 11111111111211 111111111111111111110 00111110000
Q ss_pred hhccccchhHHHHHHHhhHHHHHHHHHHHHhhcccccchhhhhhh-hhhHHHHhhhhhhcCcc--ccc----cccchhHH
Q 021864 218 LALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGN-AKGAVAVVVSILIFRNP--VSV----TGMLGYSL 290 (306)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~~~v~~~~~~~~~~~e~--~~~----~~~iG~~l 290 (306)
+.. ..+..+..++....+..........++++.++.......+ .-...+++-|..+|+|. +++ ....|..+
T Consensus 205 -~~f-~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ 282 (300)
T PF05653_consen 205 -NQF-TYPLTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLI 282 (300)
T ss_pred -hhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHH
Confidence 111 1122222222222233333334456788888777765555 45667777888899974 444 35678888
Q ss_pred HHHHHHHhhhhccc
Q 021864 291 TVMGVILYSEAKKR 304 (306)
Q Consensus 291 ~~~g~~l~~~~~~~ 304 (306)
++.|+++.+..++.
T Consensus 283 ii~GV~lL~~~~~~ 296 (300)
T PF05653_consen 283 IIIGVFLLSSSKDK 296 (300)
T ss_pred HHHhhheeeccCch
Confidence 99999988765544
No 47
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.57 E-value=1.3e-06 Score=77.64 Aligned_cols=136 Identities=19% Similarity=0.261 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhh
Q 021864 156 GFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNS 235 (306)
Q Consensus 156 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (306)
-....+..-++++..+++.|... +.++++.....+....+.++++|.....+.... ........+..+.+.+
T Consensus 14 ~~~~~~~~q~~~~~~~~~~k~a~---~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~-----~~~~~~~~~~~l~l~g 85 (358)
T PLN00411 14 FLTAMLATETSVVGISTLFKVAT---SKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRS-----LPPLSVSILSKIGLLG 85 (358)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH---HCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcc-----cCcchHHHHHHHHHHH
Confidence 35666777889999999999987 368999999999999999999888765543211 0111122233344455
Q ss_pred HHHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhh------cCccccccccchhHHHHHHHHHhh
Q 021864 236 ALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILI------FRNPVSVTGMLGYSLTVMGVILYS 299 (306)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~------~~e~~~~~~~iG~~l~~~g~~l~~ 299 (306)
+++..++...+..++++++..+++..+..|+++.++++++ ++|+++..+++|.++.+.|+.+..
T Consensus 86 ~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~ 155 (358)
T PLN00411 86 FLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVI 155 (358)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHH
Confidence 5554555567788999999999999999999999999999 699999999999999999988754
No 48
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.48 E-value=1.5e-06 Score=63.76 Aligned_cols=65 Identities=11% Similarity=0.131 Sum_probs=61.0
Q ss_pred HHHHHHHhhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhcc
Q 021864 83 FVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG 147 (306)
Q Consensus 83 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~ 147 (306)
.++.....+...+++++|.+.+..+-++.++++.+.+++++|||++++|++++.++++|++++..
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 45788999999999999999999999999999999999999999999999999999999987653
No 49
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.48 E-value=3.5e-06 Score=70.50 Aligned_cols=142 Identities=15% Similarity=0.105 Sum_probs=109.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHH
Q 021864 152 FHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYL 231 (306)
Q Consensus 152 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (306)
.+..|+++++.|.+.|+.--.+.|.+ ++.++.++..+...++..+++........+.... +.. ..+..+...
T Consensus 4 ~~~~Gil~~l~Ay~lwG~lp~y~kll-----~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~--~~~-~~p~~~~~~ 75 (293)
T COG2962 4 DSRKGILLALLAYLLWGLLPLYFKLL-----EPLPATEILAHRVIWSFPFMLALLFLLRQWRELK--QLL-KQPKTLLML 75 (293)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHH-----ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH--HHH-hCcHHHHHH
Confidence 34579999999999999999999876 5789999999999999998887776665444222 222 233334444
Q ss_pred HHhhHHHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhh
Q 021864 232 LFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEA 301 (306)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~ 301 (306)
..++..-...-....++...-...++|.-.+++|.+.+++|.++++|+++..|++..++..+|+..-.+.
T Consensus 76 ~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~ 145 (293)
T COG2962 76 ALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL 145 (293)
T ss_pred HHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 4444443333344456788888999999999999999999999999999999999999999999876543
No 50
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.43 E-value=0.00018 Score=63.04 Aligned_cols=225 Identities=11% Similarity=0.028 Sum_probs=138.4
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhcccccchhHHHHhh-hhhHHHHHHHHHHHhccee---c----ccchhhhhhhhhhhh
Q 021864 72 RLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVG-ATTPFFTAVFAYLMTLKRE---A----WLTYVTLIPVVTGVI 143 (306)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pv~~~l~~~~~~~~~~---~----~~~~~~i~~~~~G~~ 143 (306)
...+...+..|++....+.....+.+++..+...-+. .++.+...+...++.+|=. + ..-..+++++++|++
T Consensus 70 ~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~ 149 (345)
T PRK13499 70 GSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVA 149 (345)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHH
Confidence 3456667788999999999999999999999988776 7788888888888877532 2 235578888889999
Q ss_pred hhcc----CCC---------cchHHHHHHHHHHHHHHHHHH-------HHHHHHhccCCCCCChHHHHHHHHH---HHHH
Q 021864 144 IASG----GEP---------SFHLFGFLMCIAATAARALKS-------VLQGILLSSEGEKLNSMNLLLYMAP---IAVV 200 (306)
Q Consensus 144 l~~~----~~~---------~~~~~G~~~~l~a~~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 200 (306)
+.+. .|. .....|.+..+++.+.++.++ ...+... +.+.++.....-+.. .+.+
T Consensus 150 l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~---~~g~~~~~~~lp~~~~~~~G~~ 226 (345)
T PRK13499 150 IVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAA---ALGVDPLYAALPSYVVIMGGGA 226 (345)
T ss_pred HHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhh---hcCCCchHHHHHHHHHHHHHHH
Confidence 8875 332 123679999999999999999 4443321 133444433222222 3333
Q ss_pred HHH-HHHHHh-cccccchhhhccccc----hhHHHHHHHhhHHHHHHHHHHHHhhcccccchhh----hhhhhhhHHHHh
Q 021864 201 LLL-PATLIM-EKNVVGITLALARDD----VKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQ----VLGNAKGAVAVV 270 (306)
Q Consensus 201 ~~~-~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s----~~~~~~~v~~~~ 270 (306)
..- ...... ..+...........+ .......++.|++=+..+..+...-++.+..... +...+.-+++.+
T Consensus 227 ~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistl 306 (345)
T PRK13499 227 ITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNL 306 (345)
T ss_pred HHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHH
Confidence 221 111110 011100001111111 1222223444454445555555555666444333 333677799999
Q ss_pred hhhhhcCcccc------ccccchhHHHHHHHHHhhh
Q 021864 271 VSILIFRNPVS------VTGMLGYSLTVMGVILYSE 300 (306)
Q Consensus 271 ~~~~~~~e~~~------~~~~iG~~l~~~g~~l~~~ 300 (306)
.+.+ ++|.=+ ..-++|.++++.|..+...
T Consensus 307 wGi~-lkE~K~a~~k~~~~l~~G~vliI~g~~lig~ 341 (345)
T PRK13499 307 WGLV-LKEWKGASRRPVRVLSLGCVVIILAANIVGL 341 (345)
T ss_pred hhhh-hhhccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence 9995 899766 4568899999999887653
No 51
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.41 E-value=1.3e-05 Score=62.50 Aligned_cols=130 Identities=9% Similarity=0.053 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHHHHhhh-----CCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCcc----c-----h-hhhhHHHHHH
Q 021864 16 WYSSNIGVLLLNKYLLSN-----YGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQT----I-----R-SRLQFLKISA 80 (306)
Q Consensus 16 ~~~~~~~~~~~~k~~~~~-----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~-~~~~~~~~~~ 80 (306)
-..+........|..+++ .+.+ |..+.......+.+.+.+.....+..+..+ . . ..+.....+.
T Consensus 8 s~~~~al~~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (153)
T PF03151_consen 8 SSLFSALRNVLIKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLIL 86 (153)
T ss_pred HHHHHHHHHHHHHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHH
Confidence 334455556667777776 4566 888888888888888777655543322110 0 0 2234555666
Q ss_pred HHHHHHHHHhhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhc
Q 021864 81 LSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS 146 (306)
Q Consensus 81 ~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~ 146 (306)
.+++....+...+..++++++-+.+++.....+.+.+++.++++|+++..++.|+.+.+.|.++.+
T Consensus 87 ~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 87 SGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS 152 (153)
T ss_pred HHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence 777788999999999999999999999999999999999999999999999999999999987643
No 52
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.35 E-value=1.4e-05 Score=69.46 Aligned_cols=122 Identities=10% Similarity=0.027 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHH-HHHHHhhhhhcc
Q 021864 18 SSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFV-FCISVVFGNVSL 96 (306)
Q Consensus 18 ~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al 96 (306)
++........|...++ .+ |..... ....+.+.+.+....... ... .+...+...+..+++ ..++..+++.++
T Consensus 158 ~~~a~~~v~~r~~~~~--~~-~~~~~~-~~~~~~~~l~~~~~~~~~--~~~-~~~~~~~~~l~lgv~~t~~~~~l~~~~~ 230 (293)
T PRK10532 158 ACWAIYILSGQRAGAE--HG-PATVAI-GSLIAALIFVPIGALQAG--EAL-WHWSILPLGLAVAILSTALPYSLEMIAL 230 (293)
T ss_pred HHHHHHHHHHHHHhcc--CC-chHHHH-HHHHHHHHHHHHHHHccC--ccc-CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444556667776554 44 666544 445555555444333211 111 122223333344444 567788999999
Q ss_pred cccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhc
Q 021864 97 RFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS 146 (306)
Q Consensus 97 ~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~ 146 (306)
++.+++.++.+..++|++..++++++++|+++..+++|..++++|.+...
T Consensus 231 ~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~ 280 (293)
T PRK10532 231 TRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST 280 (293)
T ss_pred HhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998775
No 53
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.35 E-value=9e-06 Score=70.60 Aligned_cols=109 Identities=14% Similarity=0.139 Sum_probs=82.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHH-HHHHHhhhhhcccccchhHHHHhhhhhHHHHHH
Q 021864 39 PIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFV-FCISVVFGNVSLRFLPVSFNQAVGATTPFFTAV 117 (306)
Q Consensus 39 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l 117 (306)
+...+.++...+.+.+.+...... .+.......+.+...+..+++ ..++..+++.++++.+++.+.++..++|++..+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i 255 (292)
T PRK11272 177 GMMAGAAEMLAAGVVLLIASLLSG-ERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVL 255 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHcC-CcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence 455677888887776665443321 111111222344455555555 567888999999999999999999999999999
Q ss_pred HHHHHhcceecccchhhhhhhhhhhhhhccC
Q 021864 118 FAYLMTLKREAWLTYVTLIPVVTGVIIASGG 148 (306)
Q Consensus 118 ~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~ 148 (306)
+++++++|+++..+++|..+++.|+.+....
T Consensus 256 ~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~ 286 (292)
T PRK11272 256 LGTGLGGETLSPIEWLALGVIVFAVVLVTLG 286 (292)
T ss_pred HHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999887643
No 54
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.34 E-value=9.9e-06 Score=60.91 Aligned_cols=124 Identities=15% Similarity=0.158 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHh
Q 021864 155 FGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFN 234 (306)
Q Consensus 155 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (306)
.|.++.+.+.++.+...++.|+-.+ +.+..+.... . .... .. .. .+... +..
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~----~~g~~~~~~~-~----~~~~-~~-~~-------------~p~~~----i~l 53 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMS----RLPLLSHAWD-F----IAAL-LA-FG-------------LALRA----VLL 53 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHh----hCCCccchhH-H----HHHH-HH-Hh-------------ccHHH----HHH
Confidence 3778899999999999999998762 2221111110 0 0000 00 00 00001 112
Q ss_pred hHHHH-HHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhh--hcCccccccccchhHHHHHHHHHhhhhccccC
Q 021864 235 SALAY-FVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSIL--IFRNPVSVTGMLGYSLTVMGVILYSEAKKRSK 306 (306)
Q Consensus 235 ~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~--~~~e~~~~~~~iG~~l~~~g~~l~~~~~~~~~ 306 (306)
++..+ ........++++.+...+.......++...+.++. ++||++|+.+++|.++++.|+++.++.++|++
T Consensus 54 gl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~~~ 128 (129)
T PRK02971 54 GLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTKAR 128 (129)
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 22222 22444555889999988888878888777777775 89999999999999999999999987766653
No 55
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.30 E-value=5.9e-06 Score=72.14 Aligned_cols=134 Identities=8% Similarity=-0.081 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhh------h---hHHHHHHHHH
Q 021864 13 VAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSR------L---QFLKISALSF 83 (306)
Q Consensus 13 ~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~ 83 (306)
+..-..+........|...++.+.+ |..++.++...+.+.+.+........+....... . .+...+..+.
T Consensus 150 ~l~a~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (302)
T TIGR00817 150 AMISNITFVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAM 228 (302)
T ss_pred HHHHHHHHHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHH
Confidence 3333444455566777777633466 8899999998888877776544321110000000 0 0111222222
Q ss_pred -HHHHHHhhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhcc
Q 021864 84 -VFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG 147 (306)
Q Consensus 84 -~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~ 147 (306)
++...+.+.+.+++++++.++++.....|+++.++++++++|+++..+++|..+++.|+.+...
T Consensus 229 ~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 229 GFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence 3444456777899999999999999999999999999999999999999999999999988763
No 56
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.22 E-value=4.1e-05 Score=68.17 Aligned_cols=138 Identities=15% Similarity=0.045 Sum_probs=98.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC-hHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHH
Q 021864 153 HLFGFLMCIAATAARALKSVLQGILLSSEGEKLN-SMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYL 231 (306)
Q Consensus 153 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (306)
+..-..+.+.--.+...+++..|... +..+ |+.+..++...+.+...+... .. ........ .....+..+
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl----~~~~~P~~l~~~~~~~~~l~~~~~~~-~~-~~~~~~~~---~~~~~~~~l 117 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLAL----NMLPLPWTISSLQLFVGWLFALLYWA-TG-FRKIPRIK---SLKLFLKNF 117 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH----HhCChhHHHHHHHHHHHHHHHHHHHH-hC-CCCCCCCC---CHHHHHHHH
Confidence 44455566666677778899999988 3467 999999999988776544331 11 11000000 011122234
Q ss_pred HHhhHHHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhh
Q 021864 232 LFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYS 299 (306)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~ 299 (306)
+..++++...+...+.+++..++..+++....+|+++++++.++++|+++..++.|.++++.|+.+..
T Consensus 118 lp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~ 185 (350)
T PTZ00343 118 LPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS 185 (350)
T ss_pred HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence 45555555445555678999999999999999999999999999999999999999999999999765
No 57
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.21 E-value=5.3e-05 Score=66.04 Aligned_cols=135 Identities=14% Similarity=0.025 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccC--c--cchhhhhHHHHHHHHHH-HHH
Q 021864 13 VAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPM--Q--TIRSRLQFLKISALSFV-FCI 87 (306)
Q Consensus 13 ~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~-~~~ 87 (306)
...-..+.....+.+|...++.+-+.......++...+.+.............. + .....+.+...+-.+++ ..+
T Consensus 148 ~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~ 227 (299)
T PRK11453 148 TLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIV 227 (299)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHH
Confidence 333334555556667776544222223444555555554433322222211110 0 01122334444444444 567
Q ss_pred HHhhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhcc
Q 021864 88 SVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG 147 (306)
Q Consensus 88 ~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~ 147 (306)
+..+++.++++.+++.+..+..++|++..++++++++|+++..+++|..++++|+.+...
T Consensus 228 ~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 228 GYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF 287 (299)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence 888999999999999999999999999999999999999999999999999999987653
No 58
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.21 E-value=2.8e-05 Score=67.61 Aligned_cols=129 Identities=15% Similarity=0.086 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHh
Q 021864 155 FGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFN 234 (306)
Q Consensus 155 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (306)
.+....++++++|+...+..|... ++++|.....+....+.+++.+.. ..+.. .+.... ....+
T Consensus 4 ~~~l~~l~a~~~Wg~~~~~~k~~~----~~~~P~~~~~~R~~~a~l~l~~~~---~~~~~------~~~~~~---~~~~~ 67 (295)
T PRK11689 4 KATLIGLIAILLWSTMVGLIRGVS----ESLGPVGGAAMIYSVSGLLLLLTV---GFPRL------RQFPKR---YLLAG 67 (295)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHH----ccCChHHHHHHHHHHHHHHHHHHc---ccccc------ccccHH---HHHHH
Confidence 356788999999999999999876 678999999999988888776542 11110 111111 12222
Q ss_pred hHHHHHHHHHHHHhh----cccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhh
Q 021864 235 SALAYFVNLTNFLVT----KHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYS 299 (306)
Q Consensus 235 ~~~~~~~~~~~~~~~----~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~ 299 (306)
++....+....+... +..++...++..+..|+++.++++++++|+++..+++|+++.+.|+.+..
T Consensus 68 ~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~ 136 (295)
T PRK11689 68 GLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVL 136 (295)
T ss_pred hHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhhee
Confidence 232223333333333 45677888899999999999999999999999999999999999988764
No 59
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.01 E-value=1.6e-05 Score=67.41 Aligned_cols=69 Identities=16% Similarity=0.192 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHhhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhc
Q 021864 78 ISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS 146 (306)
Q Consensus 78 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~ 146 (306)
+..+-+.+.++....+.|+.+-|++..+-+.+++.+..++++..++|||+++...+|+.++++|..+..
T Consensus 67 Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV 135 (335)
T KOG2922|consen 67 WWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIV 135 (335)
T ss_pred HHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEE
Confidence 444455588999999999999999999999999999999999999999999999999999999988766
No 60
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.98 E-value=8.8e-05 Score=54.69 Aligned_cols=70 Identities=20% Similarity=0.258 Sum_probs=57.9
Q ss_pred HhhHHHH-HHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhhcc
Q 021864 233 FNSALAY-FVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAKK 303 (306)
Q Consensus 233 ~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~~ 303 (306)
..+.++. ..+...+.+.+..++ ..+......|+++.+++.++++|+++..+++|..++..|+.+..+.+.
T Consensus 39 ~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 39 LAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 3344443 556666778888885 777888899999999999999999999999999999999999877654
No 61
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.92 E-value=0.00027 Score=61.32 Aligned_cols=120 Identities=10% Similarity=0.052 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHHHHHHHhhhhhccc-
Q 021864 19 SNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLR- 97 (306)
Q Consensus 19 ~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~- 97 (306)
+...+....|.. +.+ |...++.|.....+.........+ +.++ ...+..+. .+..|++...++.++..+.+
T Consensus 163 ~y~~~~~~~~~~----~~~-~~~~~~~~~~g~~~~~~~~~~~~~-~~~~-~~~~~~~~-~~~~Gi~~~ia~~~y~~~~~~ 234 (290)
T TIGR00776 163 GYLVYVVVAKAF----GVD-GLSVLLPQAIGMVIGGIIFNLGHI-LAKP-LKKYAILL-NILPGLMWGIGNFFYLFSAQP 234 (290)
T ss_pred HHHHHHHHHHHc----CCC-cceehhHHHHHHHHHHHHHHHHHh-cccc-hHHHHHHH-HHHHHHHHHHHHHHHHHHccc
Confidence 334444556653 244 777766666522222222211111 1111 12233333 44478888899999999999
Q ss_pred ccchhHHHHhhhhhHHHHHHHHHHHhcceecccch----hhhhhhhhhhhhhc
Q 021864 98 FLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTY----VTLIPVVTGVIIAS 146 (306)
Q Consensus 98 ~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~----~~i~~~~~G~~l~~ 146 (306)
+.+++.+..+.+.+|+...+++.+++||+.+++|+ +|.++++.|+.+..
T Consensus 235 ~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 235 KVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999 99999999988764
No 62
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.87 E-value=0.00035 Score=51.21 Aligned_cols=57 Identities=12% Similarity=0.192 Sum_probs=49.3
Q ss_pred HHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhh
Q 021864 243 LTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYS 299 (306)
Q Consensus 243 ~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~ 299 (306)
......+++.+...+...-.+.++.+.+.|+++|||++|+.+++|.++++.|+.+..
T Consensus 52 ~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 52 VLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 334447888888877777779999999999999999999999999999999998764
No 63
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.84 E-value=5.7e-05 Score=56.81 Aligned_cols=73 Identities=14% Similarity=0.051 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHhhhhhcccccchhHHHHhhhhhHHHHHHHHHH--HhcceecccchhhhhhhhhhhhhhccCC
Q 021864 77 KISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYL--MTLKREAWLTYVTLIPVVTGVIIASGGE 149 (306)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~--~~~~~~~~~~~~~i~~~~~G~~l~~~~~ 149 (306)
.....-.++.++..+++.+++..|++.+..+.+..++.+.+.++. +++|++|+.|++|+.++++|+.++..++
T Consensus 50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 344555568899999999999999999999999999888888875 8999999999999999999999887543
No 64
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.75 E-value=0.0005 Score=60.03 Aligned_cols=127 Identities=14% Similarity=0.111 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhhHHHHHHHHHHH
Q 021864 167 RALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNF 246 (306)
Q Consensus 167 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (306)
+..+.+.+|++.++....-.++.++..+.....+...+.......+. ....+... ....+++.........
T Consensus 12 ~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~------~~~~~~~~---~~~~~~~~~~~~~~~~ 82 (303)
T PF08449_consen 12 CCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK------SRKIPLKK---YAILSFLFFLASVLSN 82 (303)
T ss_pred HHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC------CCcChHHH---HHHHHHHHHHHHHHHH
Confidence 34467888888853322224777777787777766665553333011 11111111 2223344555556667
Q ss_pred HhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhhc
Q 021864 247 LVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAK 302 (306)
Q Consensus 247 ~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~ 302 (306)
.++++.+..+..+....+++..++++.++++++.+..++.+..++..|+.+....+
T Consensus 83 ~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~ 138 (303)
T PF08449_consen 83 AALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSD 138 (303)
T ss_pred HHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecc
Confidence 78999999999999999999999999999999999999999999999999887544
No 65
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.68 E-value=0.00088 Score=58.73 Aligned_cols=140 Identities=15% Similarity=0.156 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHH
Q 021864 154 LFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLF 233 (306)
Q Consensus 154 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (306)
+.+.+++-.-++|-+..++..+.+.++ ..+. |...+...+..-.++..+......+.. .... .....+|...+
T Consensus 12 ~~~~~lgQ~lsl~~~~t~~~s~~l~~~-~~~~-P~~Qs~~~Y~~l~~vy~~~~~~r~~~~--~~~~---~~~~~~w~y~l 84 (334)
T PF06027_consen 12 WIVLLLGQVLSLCITGTGTFSSLLANK-GVNI-PTFQSFFNYVLLALVYTPILLYRRGFK--KWLK---VLKRPWWKYFL 84 (334)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhc-CccC-cHHHHHHHHHHHHHHHhhhhhhccccc--cchh---hcchhHHHHHH
Confidence 456677777788888888888887632 2333 444555555554455555443332221 1111 11122333444
Q ss_pred hhHHHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhh
Q 021864 234 NSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSE 300 (306)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~ 300 (306)
.+++=...|.....+.++++.....++.....++++++++++++|++++.+++|..+++.|+.+...
T Consensus 85 la~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~ 151 (334)
T PF06027_consen 85 LALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVV 151 (334)
T ss_pred HHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheee
Confidence 4666777788888899999999999999999999999999999999999999999999999887654
No 66
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.67 E-value=0.001 Score=50.78 Aligned_cols=130 Identities=25% Similarity=0.402 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCC-ChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhh
Q 021864 157 FLMCIAATAARALKSVLQGILLSSEGEKL-NSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNS 235 (306)
Q Consensus 157 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (306)
.++.+.+..+-+.+..++.++. ++. ||+.-.......+.+.+.......+.+.. . ... ..-|+...+|
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~----~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~----~--~~~-~~p~w~~lGG 71 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLG----KALGSPLVASFISFGVGFILLLIILLITGRPSL----A--SLS-SVPWWAYLGG 71 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHhCccHHHHHHHHHHHHHHHHHHHHHhccccc----c--hhc-cCChHHhccH
Confidence 5677888888999999988887 334 48998999999999888887766664421 1 111 1122334477
Q ss_pred HHHHHHHHHHHHhhcccccchhhhhhhh-hhHHHHhhhhh-hc---CccccccccchhHHHHHHHHH
Q 021864 236 ALAYFVNLTNFLVTKHTSALTLQVLGNA-KGAVAVVVSIL-IF---RNPVSVTGMLGYSLTVMGVIL 297 (306)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~-~~v~~~~~~~~-~~---~e~~~~~~~iG~~l~~~g~~l 297 (306)
+++..+..+......+.++......... +-+.+.+++.+ .| .+++++.+++|.++++.|+.+
T Consensus 72 ~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 72 LLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 8887777777778999999988877775 55667778876 33 367899999999999999864
No 67
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.64 E-value=0.0017 Score=55.86 Aligned_cols=141 Identities=21% Similarity=0.174 Sum_probs=96.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHH
Q 021864 153 HLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLL 232 (306)
Q Consensus 153 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (306)
...+....+..++.++......|+..+ + ..+...........+.....+.. ..+.... .. ... ...+...
T Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~-~~~--~~~~~~~ 74 (292)
T COG0697 5 LLLGLLALLLWGLLWGLSFIALKLAVE--S-LDPFLFAAALRFLIAALLLLPLL-LLEPRGL---RP-ALR--PWLLLLL 74 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc--c-cCChHHHHHHHHHHHHHHHHHHH-Hhhcccc---cc-ccc--chHHHHH
Confidence 456778888888999999999988762 1 34555555556555555422222 1111000 00 111 1233344
Q ss_pred HhhHHHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhh-hhcCccccccccchhHHHHHHHHHhhhhcc
Q 021864 233 FNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSI-LIFRNPVSVTGMLGYSLTVMGVILYSEAKK 303 (306)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~-~~~~e~~~~~~~iG~~l~~~g~~l~~~~~~ 303 (306)
...+.........+..+++.++...+......|++..+++. ++++|+++..++.|..+...|+.+......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~ 146 (292)
T COG0697 75 LALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGG 146 (292)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCC
Confidence 44444455567777789999999999999999999999996 777999999999999999999998765443
No 68
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.49 E-value=0.00033 Score=51.76 Aligned_cols=70 Identities=13% Similarity=0.273 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHhhhhhcccccchhHHHHhh-hhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhcc
Q 021864 78 ISALSFVFCISVVFGNVSLRFLPVSFNQAVG-ATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG 147 (306)
Q Consensus 78 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~ 147 (306)
......++..+..+...+++++|.+.+..+- ...-+.+.+.+.++++|++++.|++++.++++|++.+..
T Consensus 33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 4455667889999999999999999998885 689999999999999999999999999999999987763
No 69
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.39 E-value=0.00061 Score=49.64 Aligned_cols=70 Identities=11% Similarity=0.228 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHhhhhhcccccchhHHHHhh-hhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhcc
Q 021864 78 ISALSFVFCISVVFGNVSLRFLPVSFNQAVG-ATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG 147 (306)
Q Consensus 78 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~ 147 (306)
.+....++..+..+...+++++|.+.+..+- ...-+.+.+.++++++|++++.|++++.++++|++.+..
T Consensus 33 ~i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 3345566788888999999999999998885 578889999999999999999999999999999998764
No 70
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.37 E-value=0.0031 Score=53.31 Aligned_cols=103 Identities=7% Similarity=0.011 Sum_probs=75.3
Q ss_pred HHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHHHHHHHhhhhhcccccc
Q 021864 21 IGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLP 100 (306)
Q Consensus 21 ~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~ 100 (306)
..+....|+ .+.+ |+....=|.+...+...++....+ ++..+|+.++. +..|+.+..++.++..|.+...
T Consensus 151 ~~Y~~~~~~----~~~~-~~~~~lPqaiGm~i~a~i~~~~~~----~~~~~k~~~~n-il~G~~w~ignl~~~is~~~~G 220 (269)
T PF06800_consen 151 WIYSVIPKA----FHVS-GWSAFLPQAIGMLIGAFIFNLFSK----KPFFEKKSWKN-ILTGLIWGIGNLFYLISAQKNG 220 (269)
T ss_pred HHHHHHHHh----cCCC-hhHhHHHHHHHHHHHHHHHhhccc----ccccccchHHh-hHHHHHHHHHHHHHHHhHHhcc
Confidence 344455555 2244 777777776666665554433321 12223444444 5679999999999999999999
Q ss_pred hhHHHHhhhhhHHHHHHHHHHHhcceecccchh
Q 021864 101 VSFNQAVGATTPFFTAVFAYLMTLKREAWLTYV 133 (306)
Q Consensus 101 ~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~ 133 (306)
.+++-.+.++.++...+.+.+++||+-+++++.
T Consensus 221 ~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~ 253 (269)
T PF06800_consen 221 VATAFTLSQLGVVISTLGGIFILKEKKTKKEMI 253 (269)
T ss_pred chhhhhHHhHHHHHHHhhhheEEEecCchhhHH
Confidence 999999999999999999999999999988774
No 71
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.29 E-value=0.0032 Score=51.94 Aligned_cols=126 Identities=10% Similarity=0.013 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHH-HHHHHh
Q 021864 12 LVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFV-FCISVV 90 (306)
Q Consensus 12 ~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 90 (306)
+.+.-..++..+++..|..-+. -+ .-.-+..-+.++.++..++..... -+.....+....-+..+++ -.+...
T Consensus 152 ~Al~AG~~Wa~YIv~G~r~g~~--~~-g~~g~a~gm~vAaviv~Pig~~~a---g~~l~~p~ll~laLgvavlSSalPYs 225 (292)
T COG5006 152 LALGAGACWALYIVLGQRAGRA--EH-GTAGVAVGMLVAALIVLPIGAAQA---GPALFSPSLLPLALGVAVLSSALPYS 225 (292)
T ss_pred HHHHHhHHHHHHHHHcchhccc--CC-CchHHHHHHHHHHHHHhhhhhhhc---chhhcChHHHHHHHHHHHHhcccchH
Confidence 3344446666777776666532 22 233344556666666666554321 1111222233334444455 356778
Q ss_pred hhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhh
Q 021864 91 FGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVI 143 (306)
Q Consensus 91 ~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~ 143 (306)
+...+++..|..++.++.+.+|.+.++.++++++|++|..||.++..++.+.+
T Consensus 226 LEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 226 LEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred HHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998887765
No 72
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.27 E-value=0.0049 Score=44.75 Aligned_cols=68 Identities=9% Similarity=0.006 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHhhhhhcccccchhHHHHhh-hhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhh
Q 021864 78 ISALSFVFCISVVFGNVSLRFLPVSFNQAVG-ATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIA 145 (306)
Q Consensus 78 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~ 145 (306)
......++..+..+...+++++|.+.+..+- ....+.+.+.+.+++||++++.|++++.+++.|++.+
T Consensus 38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 4444566778888999999999999987765 5778889999999999999999999999999999865
No 73
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.23 E-value=0.0013 Score=47.90 Aligned_cols=56 Identities=11% Similarity=0.211 Sum_probs=46.9
Q ss_pred hhccccc-chhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhhcc
Q 021864 248 VTKHTSA-LTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAKK 303 (306)
Q Consensus 248 ~~~~~~~-~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~~ 303 (306)
++++.+. ..+++..-+..+.+.+.++++|||++|+.+++|+.+++.|+...+...+
T Consensus 50 al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~~ 106 (110)
T PRK09541 50 TLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLSR 106 (110)
T ss_pred HHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 5666663 4456777788999999999999999999999999999999999876543
No 74
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.19 E-value=0.0061 Score=44.25 Aligned_cols=52 Identities=15% Similarity=0.338 Sum_probs=44.4
Q ss_pred hhcccc-cchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhh
Q 021864 248 VTKHTS-ALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYS 299 (306)
Q Consensus 248 ~~~~~~-~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~ 299 (306)
+.|+.+ ...+++..-+..+.+.+.+.++|||++|+.+++|+.+++.|+...+
T Consensus 55 al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 55 AVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 556655 3456788888899999999999999999999999999999998764
No 75
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.18 E-value=0.0013 Score=47.41 Aligned_cols=69 Identities=16% Similarity=0.108 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHhhhhhcccccchhHHHHhh-hhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhc
Q 021864 78 ISALSFVFCISVVFGNVSLRFLPVSFNQAVG-ATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS 146 (306)
Q Consensus 78 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~ 146 (306)
.+....++..+..+...+++.+|.+.+..+- ....+.+.+.+.++.||++++.|++++.++++|++.+-
T Consensus 32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 3444666888899999999999999887766 58889999999999999999999999999999998764
No 76
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.11 E-value=0.0014 Score=46.80 Aligned_cols=69 Identities=16% Similarity=0.140 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHhhhhhcccccchhHHHHhh-hhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhc
Q 021864 78 ISALSFVFCISVVFGNVSLRFLPVSFNQAVG-ATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS 146 (306)
Q Consensus 78 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~ 146 (306)
.+..-.++..+..+...+++++|.+++..+- ....+.+.+.++++++|+.+..|++++.++++|++.+-
T Consensus 33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk 102 (106)
T COG2076 33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence 4445566788888999999999999876554 77888899999999999999999999999999998664
No 77
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.08 E-value=0.017 Score=44.09 Aligned_cols=122 Identities=11% Similarity=0.057 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHHHHHHHhhhhhcccc
Q 021864 19 SNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRF 98 (306)
Q Consensus 19 ~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 98 (306)
.-..+...|-.+-+..+ .|+.-++..+..+.+.+..+....++.+.++. ++.++ +....|++......+.......
T Consensus 12 ~i~~q~~~N~~L~~~~g--s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~-~~~p~-w~~lGG~lG~~~V~~~~~~vp~ 87 (138)
T PF04657_consen 12 LIALQAAFNGQLGKALG--SPLVASFISFGVGFILLLIILLITGRPSLASL-SSVPW-WAYLGGLLGVFFVLSNIILVPR 87 (138)
T ss_pred HHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHHHHHHHHHHHhcccccchh-ccCCh-HHhccHHHHHHHHHHHHHHhhh
Confidence 33344556767666644 48999999999999988877666554322222 22233 3445888888888899999999
Q ss_pred cchhHHHHhh-hhhHHHHHHHHHH----Hhcceecccchhhhhhhhhhhhh
Q 021864 99 LPVSFNQAVG-ATTPFFTAVFAYL----MTLKREAWLTYVTLIPVVTGVII 144 (306)
Q Consensus 99 ~~~~~~~~i~-~~~pv~~~l~~~~----~~~~~~~~~~~~~i~~~~~G~~l 144 (306)
++++....+. .-+.+...+++.+ ..|++++++|..+++++++|+.+
T Consensus 88 lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 88 LGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 8888877666 5667777777875 45678999999999999999864
No 78
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.04 E-value=0.00021 Score=58.47 Aligned_cols=240 Identities=16% Similarity=0.163 Sum_probs=155.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHHHHHHHhhhhhcccccchhHHHHhh-hhhHHHHHH
Q 021864 39 PIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVG-ATTPFFTAV 117 (306)
Q Consensus 39 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pv~~~l 117 (306)
|-..+.--.+.+.++........ .| ....+ .+-.-+..|++..+.+...+.|.++++++.+.-+. .++.+-+.+
T Consensus 28 p~qQ~lGtT~GALifaiiv~~~~--~p--~~T~~-~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL 102 (288)
T COG4975 28 PYQQTLGTTLGALIFAIIVFLFV--SP--ELTLT-IFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSL 102 (288)
T ss_pred hhHhhhhccHHHHHHHHHHheee--cC--ccchh-hHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhcee
Confidence 66666555555555555443331 22 22222 34556678888999999999999999999888776 678888889
Q ss_pred HHHHHhcceecccch----hhhhhhhhhhhhhccCCC--------cchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 021864 118 FAYLMTLKREAWLTY----VTLIPVVTGVIIASGGEP--------SFHLFGFLMCIAATAARALKSVLQGILLSSEGEKL 185 (306)
Q Consensus 118 ~~~~~~~~~~~~~~~----~~i~~~~~G~~l~~~~~~--------~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~ 185 (306)
++.+.++|=.+..+. .++++.+.|+.+-+.+|. ++...|....+.+.+.|-.|-+..+... -+..
T Consensus 103 ~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~---v~g~ 179 (288)
T COG4975 103 FGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFD---VDGL 179 (288)
T ss_pred eeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeecccc---ccch
Confidence 999999996655543 577788889888885542 1225688999999999999999987742 1233
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhhHHHHHHHHHHHHhhcccccchhhhhhhhhh
Q 021864 186 NSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKG 265 (306)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 265 (306)
+...-...-+..+++.+ . ....+.. . ....+.-+..|+.=...|..++...++.+..+.=-++.+.-
T Consensus 180 saiLPqAiGMv~~ali~---~-~~~~~~~--------~-~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgV 246 (288)
T COG4975 180 SAILPQAIGMVIGALIL---G-FFKMEKR--------F-NKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGV 246 (288)
T ss_pred hhhhHHHHHHHHHHHHH---h-hcccccc--------h-HHHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhhee
Confidence 33322333333332222 2 1111110 0 01112223333433455666666777777666666777888
Q ss_pred HHHHhhhhhhcCcccccccc----chhHHHHHHHHHhh
Q 021864 266 AVAVVVSILIFRNPVSVTGM----LGYSLTVMGVILYS 299 (306)
Q Consensus 266 v~~~~~~~~~~~e~~~~~~~----iG~~l~~~g~~l~~ 299 (306)
+++++-+.++++|+-|..++ +|.++++.|..+..
T Consensus 247 iisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg 284 (288)
T COG4975 247 IISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG 284 (288)
T ss_pred eeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence 99999999999999887654 67788888776643
No 79
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.98 E-value=0.018 Score=44.04 Aligned_cols=139 Identities=20% Similarity=0.233 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHH
Q 021864 154 LFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLF 233 (306)
Q Consensus 154 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (306)
....+..+.+..+...++..+.++.+ ..+ +|..-....+..+.+.+.......++... . . .. ...-|+...
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~--~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~-~--a--~~-~~~pwW~~~ 74 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLAR--YLG-SPLLASLISFLVGTVLLLILLLIKQGHPG-L--A--AV-ASAPWWAWI 74 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHH--HcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCc-h--h--hc-cCCchHHHH
Confidence 45678888999999999999998873 222 57777777778887777777665443331 1 1 11 112233445
Q ss_pred hhHHHHHHHHHHHHhhcccccchhhhhhhh-hhHHHHhhhhhhcC----ccccccccchhHHHHHHHHHhhhh
Q 021864 234 NSALAYFVNLTNFLVTKHTSALTLQVLGNA-KGAVAVVVSILIFR----NPVSVTGMLGYSLTVMGVILYSEA 301 (306)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~-~~v~~~~~~~~~~~----e~~~~~~~iG~~l~~~g~~l~~~~ 301 (306)
.|+++..+-........+.++.+...+-.. .-+.+++++.+=+. .++|..+++|.++++.|+++.++.
T Consensus 75 GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~ 147 (150)
T COG3238 75 GGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF 147 (150)
T ss_pred ccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence 557776666566667888887777655544 45566666655333 468999999999999996665433
No 80
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=96.98 E-value=0.0078 Score=44.51 Aligned_cols=55 Identities=16% Similarity=0.307 Sum_probs=45.1
Q ss_pred hhccccc-chhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhhc
Q 021864 248 VTKHTSA-LTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAK 302 (306)
Q Consensus 248 ~~~~~~~-~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~ 302 (306)
++++.+. ..+++...+..+.+.+.+.++|||++|+.+++|+.+++.|++..+...
T Consensus 50 al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 50 AVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 4566553 344566677888999999999999999999999999999999887543
No 81
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.88 E-value=0.006 Score=43.64 Aligned_cols=55 Identities=20% Similarity=0.307 Sum_probs=47.7
Q ss_pred hhcccc-cchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhhc
Q 021864 248 VTKHTS-ALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAK 302 (306)
Q Consensus 248 ~~~~~~-~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~ 302 (306)
.+|+.+ .+.+++.+-+..+-+.+.++++|||++++.+++|..+++.|+...+..+
T Consensus 50 alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s 105 (106)
T COG2076 50 ALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS 105 (106)
T ss_pred HHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence 567766 4556888899999999999999999999999999999999999876543
No 82
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.79 E-value=0.049 Score=47.43 Aligned_cols=145 Identities=19% Similarity=0.170 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhccc-ccchhhhcccc---chhHHHH
Q 021864 155 FGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKN-VVGITLALARD---DVKIIWY 230 (306)
Q Consensus 155 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~ 230 (306)
.=.+..+...+.++......|+..++++.++.|.+.....-..-.++.+......+.. ........... .+.....
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 3456666677788888888888876555677788888777777777776666444322 01110011111 1111222
Q ss_pred HHHhhHHHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhh
Q 021864 231 LLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYS 299 (306)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~ 299 (306)
+.+-+++-...|-..+...+..+|.++.+...++...+.+++.++++++++..||...++...|+.+.+
T Consensus 95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 333344444556677889999999999999999999999999999999999999999999999999887
No 83
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.79 E-value=0.0052 Score=44.33 Aligned_cols=53 Identities=19% Similarity=0.232 Sum_probs=46.3
Q ss_pred hhcccc-cchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhh
Q 021864 248 VTKHTS-ALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSE 300 (306)
Q Consensus 248 ~~~~~~-~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~ 300 (306)
+.++.+ ...+++..-+..+.+.+.+.++|||++|+.+++|+.+++.|+...+.
T Consensus 49 al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 49 AMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 566665 45668888899999999999999999999999999999999998754
No 84
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.70 E-value=0.0039 Score=44.06 Aligned_cols=59 Identities=14% Similarity=0.090 Sum_probs=36.5
Q ss_pred HHHHHHHHHHhhhhhcccccchhHHHHhh-hhhHHHHHHHHHHHhcceecccchhhhhhh
Q 021864 80 ALSFVFCISVVFGNVSLRFLPVSFNQAVG-ATTPFFTAVFAYLMTLKREAWLTYVTLIPV 138 (306)
Q Consensus 80 ~~~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~ 138 (306)
....++..+..+...+++++|.+.+..+- ....+.+.+.+..+++|++|+.|++++.++
T Consensus 34 ~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 34 LAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 34446888899999999999999986654 699999999999999999999999998763
No 85
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.68 E-value=0.0043 Score=52.27 Aligned_cols=72 Identities=25% Similarity=0.264 Sum_probs=63.3
Q ss_pred HHHHhhHHHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhh
Q 021864 230 YLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEA 301 (306)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~ 301 (306)
...+-+++-...|...+..++..+|.+..+....|.+++.+++.++++++++..||++..+...|+.+.+..
T Consensus 19 ~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~ 90 (244)
T PF04142_consen 19 KLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLS 90 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecC
Confidence 344455555667888888999999999999999999999999999999999999999999999999987643
No 86
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=96.54 E-value=0.0049 Score=53.52 Aligned_cols=139 Identities=14% Similarity=0.072 Sum_probs=102.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhh--hCCCCchHHHHHHHHHHHHHHHH-HHHHHHhhccC---ccchhhhhHHHHHH
Q 021864 7 LFTFGLVAAWYSSNIGVLLLNKYLLS--NYGFRYPIFLTMCHMTACSLLSY-IAIAWMKMVPM---QTIRSRLQFLKISA 80 (306)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~k~~~~--~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~ 80 (306)
......+..+.+......+..|.+++ +++.+ +..+...+.-.+...+. +.....+.... ....+.-.......
T Consensus 162 ~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (316)
T KOG1441|consen 162 LFGFISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLL 240 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHH
Confidence 45566667777788888888899995 45566 78888887777777776 54333222111 11122222333444
Q ss_pred HHHHHHHHHhhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhc
Q 021864 81 LSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS 146 (306)
Q Consensus 81 ~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~ 146 (306)
.+++....|...+..+..++|-++++....-=+.+...++++++|+.++.+..|..+.++|+.+..
T Consensus 241 ~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 241 NSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS 306 (316)
T ss_pred HHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence 457777888999999999999999999999888899999999999999999999999999999876
No 87
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.40 E-value=0.041 Score=45.61 Aligned_cols=67 Identities=9% Similarity=0.019 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHhhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhh
Q 021864 78 ISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVII 144 (306)
Q Consensus 78 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l 144 (306)
.+...+.......+....++|.++........+.++++.+++.++.+|+++..++.|..+++.|+.+
T Consensus 155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 4444566677788899999999999999999999999999999999999999999999999998764
No 88
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=96.35 E-value=0.018 Score=50.05 Aligned_cols=117 Identities=17% Similarity=0.225 Sum_probs=77.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHH
Q 021864 152 FHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYL 231 (306)
Q Consensus 152 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (306)
....|..+.+.++++.+...+++|+-..|.++ ++.+-- ... . ..... ..||..
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~--~~~~~~--~~~--------~-------------~~l~~--~~W~~G 56 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR--GSLRAG--SGG--------R-------------SYLRR--PLWWIG 56 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--cccccc--chh--------h-------------HHHhh--HHHHHH
Confidence 35679999999999999999999996633222 110000 000 0 00000 111111
Q ss_pred HHhhHHHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHh
Q 021864 232 LFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILY 298 (306)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~ 298 (306)
......+ ....+.++...++...+.++.+.-+++.+++.++++|+++..++.|.++++.|..+.
T Consensus 57 ~~~~~~g---~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~li 120 (300)
T PF05653_consen 57 LLLMVLG---EILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLI 120 (300)
T ss_pred HHHHhcc---hHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheee
Confidence 1111122 223344677778888888999999999999999999999999999999999998754
No 89
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.34 E-value=0.039 Score=48.66 Aligned_cols=138 Identities=13% Similarity=0.029 Sum_probs=87.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHH--HHHHHHH-HhcccccchhhhccccchhHHH
Q 021864 153 HLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVV--LLLPATL-IMEKNVVGITLALARDDVKIIW 229 (306)
Q Consensus 153 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 229 (306)
...|+++.+++++|++...+-.|+. +.-+||.. |- ..+.+ ++.|... ....+. ......+.+...+.
T Consensus 5 ~~~G~~~~~i~~~~~GS~~~p~K~~------k~w~wE~~-W~-v~gi~~wl~~~~~~g~~~~~~--f~~~~~~~~~~~~~ 74 (345)
T PRK13499 5 IILGIIWHLIGGASSGSFYAPFKKV------KKWSWETM-WS-VGGIFSWLILPWLIAALLLPD--FWAYYSSFSGSTLL 74 (345)
T ss_pred hHHHHHHHHHHHHHhhccccccccc------CCCchhHH-HH-HHHHHHHHHHHHHHHHHHhhh--HHHHHHhcCHHHHH
Confidence 4679999999999999999999872 22456655 33 22222 2222111 111111 11122224455555
Q ss_pred HHHHhhHHHHHHHHHHHHhhcccccchhhhh-hhhhhHHHHhhhhhhcCccc---c----ccccchhHHHHHHHHHhhh
Q 021864 230 YLLFNSALAYFVNLTNFLVTKHTSALTLQVL-GNAKGAVAVVVSILIFRNPV---S----VTGMLGYSLTVMGVILYSE 300 (306)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~~~v~~~~~~~~~~~e~~---~----~~~~iG~~l~~~g~~l~~~ 300 (306)
...++|++=-..+..++..+++.+....-.. .-+..+...+++.+++||-. + ....+|.++++.|+.+-.+
T Consensus 75 ~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~ 153 (345)
T PRK13499 75 PVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR 153 (345)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 5566666555667777778888886655443 44677888899999998743 2 3478899999999998876
No 90
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=96.07 E-value=0.12 Score=44.09 Aligned_cols=139 Identities=8% Similarity=0.017 Sum_probs=103.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhc-cCcc--chhhhhHHHHHHHHH
Q 021864 7 LFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMV-PMQT--IRSRLQFLKISALSF 83 (306)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~ 83 (306)
.....++..+.......+-..+.++++++.+ ++.+.+.--+...+.-.......+.. +.-+ ...++.+++++..+.
T Consensus 171 ~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s-~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~ 249 (327)
T KOG1581|consen 171 PIGILLLFGYLLFDGFTNATQDSLFKKYKVS-SLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST 249 (327)
T ss_pred hHhHHHHHHHHHHHhhHHhHHHHHhccCCcc-HhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH
Confidence 5566677777777777777788888887777 66666555555555444432222111 1000 123556788999999
Q ss_pred HHHHHHhhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhc
Q 021864 84 VFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS 146 (306)
Q Consensus 84 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~ 146 (306)
+.+.++.+-+.-++.-++=+.+.|..+.=+++.+++.+..+++.++.||.++...+.|+.+-.
T Consensus 250 ~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~ 312 (327)
T KOG1581|consen 250 CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEI 312 (327)
T ss_pred hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHH
Confidence 999999999999988888888899999999999999999999999999999999998887543
No 91
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.70 E-value=0.4 Score=36.77 Aligned_cols=126 Identities=11% Similarity=0.003 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCccchhhhhHHHHHHHHHHHHHHHhhhhhccc
Q 021864 18 SSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQTIRSRLQFLKISALSFVFCISVVFGNVSLR 97 (306)
Q Consensus 18 ~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 97 (306)
.+.....-.|-.+-+. .+.|..-.+..+.++.+++..+.....+.+......+..| +.+..|++.............
T Consensus 15 ~~l~~Q~~iN~qL~~~--~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pw-W~~~GG~lGa~~vt~s~~l~p 91 (150)
T COG3238 15 ALLPLQAAINGRLARY--LGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPW-WAWIGGLLGAIFVTSSILLAP 91 (150)
T ss_pred hhhhhHHHHHHHHHHH--cCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCch-HHHHccchhhhhhhhhHHhcc
Confidence 3444455567777766 3458999999999988888877666333333332233333 344556666555555555666
Q ss_pred ccchhHHH-HhhhhhHHHHHHHHHHHh----cceecccchhhhhhhhhhhhhhc
Q 021864 98 FLPVSFNQ-AVGATTPFFTAVFAYLMT----LKREAWLTYVTLIPVVTGVIIAS 146 (306)
Q Consensus 98 ~~~~~~~~-~i~~~~pv~~~l~~~~~~----~~~~~~~~~~~i~~~~~G~~l~~ 146 (306)
.+.++..+ ++.+-+.+...+++.+=. ++++++.++.++++.++|+.+..
T Consensus 92 ~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 92 RLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 65555544 444667777777776644 36789999999999999955443
No 92
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=95.62 E-value=0.0037 Score=52.02 Aligned_cols=132 Identities=14% Similarity=0.246 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHh
Q 021864 155 FGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFN 234 (306)
Q Consensus 155 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (306)
.|..+.-.+ ..+.+..+..++.. ..+|.++-......-..+..|..+....+. ..+..... ++++=
T Consensus 38 ~gl~l~~vs-~ff~~~~vv~t~~~-----e~~p~e~a~~r~l~~mlit~pcliy~~~~v------~gp~g~R~--~LiLR 103 (346)
T KOG4510|consen 38 LGLLLLTVS-YFFNSCMVVSTKVL-----ENDPMELASFRLLVRMLITYPCLIYYMQPV------IGPEGKRK--WLILR 103 (346)
T ss_pred cCceehhhH-HHHhhHHHhhhhhh-----ccChhHhhhhhhhhehhhhheEEEEEeeee------ecCCCcEE--EEEee
Confidence 466666666 66667777777765 335555554443333333333332222221 01111111 13344
Q ss_pred hHHHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhh
Q 021864 235 SALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSE 300 (306)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~ 300 (306)
|+.++...+.+|++.++.+-..+.+.....|+++.++++.+++|+.|....+|..+.+.|+++..+
T Consensus 104 g~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvR 169 (346)
T KOG4510|consen 104 GFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVR 169 (346)
T ss_pred hhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEec
Confidence 555665566677789999999999999999999999999999999999999999999999988754
No 93
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.58 E-value=0.019 Score=41.77 Aligned_cols=66 Identities=15% Similarity=0.142 Sum_probs=56.9
Q ss_pred HHHHHHHHHHhhhhhcccccchhHHHHhh-hhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhh
Q 021864 80 ALSFVFCISVVFGNVSLRFLPVSFNQAVG-ATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIA 145 (306)
Q Consensus 80 ~~~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~ 145 (306)
..-..+-.+...++..+...|.+.+.-+. ++.-+++++.++++.+|..+++.++|..+++.|+.+.
T Consensus 46 ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 46 IPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 34455667778889999999999999885 9999999999999988888999999999999998764
No 94
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=94.94 E-value=0.057 Score=38.10 Aligned_cols=46 Identities=20% Similarity=0.215 Sum_probs=25.4
Q ss_pred HHhhcccccch-hhhhhhhhhHHHHhhhhhhcCccccccccchhHHH
Q 021864 246 FLVTKHTSALT-LQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLT 291 (306)
Q Consensus 246 ~~~~~~~~~~~-~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~ 291 (306)
..++++.+... +++...+..+...+.+.++|||++|+.+++|+.++
T Consensus 47 ~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 47 SLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 34677766444 36777788999999999999999999999998874
No 95
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=92.91 E-value=1.8 Score=35.45 Aligned_cols=125 Identities=8% Similarity=-0.046 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccCc---cchhhhhHHHHHHHHHHHHHHHhhhhhcc
Q 021864 20 NIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVPMQ---TIRSRLQFLKISALSFVFCISVVFGNVSL 96 (306)
Q Consensus 20 ~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~al 96 (306)
+..++...|...+--.+. ..--.++.-+.+..++..+....+..... ...+.+...++++.|++-.+...+.-+++
T Consensus 167 saafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcv 245 (309)
T COG5070 167 SAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCV 245 (309)
T ss_pred HHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeE
Confidence 334444445444432333 34455667777777766655554432221 11123345567888999888899999999
Q ss_pred cccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhh
Q 021864 97 RFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIA 145 (306)
Q Consensus 97 ~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~ 145 (306)
+-++..++.+...+.-...++.+.+++.+..++.++.++.++....++.
T Consensus 246 rVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iY 294 (309)
T COG5070 246 RVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIY 294 (309)
T ss_pred eehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHH
Confidence 9999999999999998888888888888888888777776655544433
No 96
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=91.49 E-value=0.54 Score=38.73 Aligned_cols=63 Identities=11% Similarity=0.085 Sum_probs=54.3
Q ss_pred HHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhhccc
Q 021864 242 NLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAKKR 304 (306)
Q Consensus 242 ~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~~~ 304 (306)
..+...+++..+-.+.-+....+|+-.++++..+.+.+.+|....=...++.|+.++.+.++|
T Consensus 99 MVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~K 161 (337)
T KOG1580|consen 99 MVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENK 161 (337)
T ss_pred HHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccc
Confidence 445566888888888888889999999999999999999999999999999999988766544
No 97
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=91.34 E-value=1.2 Score=38.42 Aligned_cols=128 Identities=11% Similarity=-0.001 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcc-----CccchhhhhHHHHHHHHHHHHHHHhhh
Q 021864 18 SSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAIAWMKMVP-----MQTIRSRLQFLKISALSFVFCISVVFG 92 (306)
Q Consensus 18 ~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (306)
++........|...+..+.+ -+...++..+.+.+.+.......+..+ .+.-..-..+..+...+++..+-+.+.
T Consensus 167 ~~~a~~~v~~kk~vd~~~l~-~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s 245 (314)
T KOG1444|consen 167 LTTAAFVVYVKKSVDSANLN-KFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTS 245 (314)
T ss_pred HHHHHHHHHHHHhhcccccc-ceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHH
Confidence 44445555666666654554 455666677777666665544433211 000111223445666666677778889
Q ss_pred hhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhc
Q 021864 93 NVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS 146 (306)
Q Consensus 93 ~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~ 146 (306)
..+.+..++.+.++.....-..+.+...++.+++.++...+|+.+.+.|-++..
T Consensus 246 ~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~ 299 (314)
T KOG1444|consen 246 FLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYS 299 (314)
T ss_pred HHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHh
Confidence 999999999999999977777788878888888889888888888888877665
No 98
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=89.31 E-value=0.13 Score=42.47 Aligned_cols=65 Identities=12% Similarity=0.183 Sum_probs=54.6
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhhhcccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhh
Q 021864 71 SRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLI 136 (306)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~ 136 (306)
+|..++.. ..|+.+...|.+...|-+....++.-.+.++..+...+-+.+++|||-|++++..+.
T Consensus 206 ~K~t~~ni-i~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~ 270 (288)
T COG4975 206 NKYTWLNI-IPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVI 270 (288)
T ss_pred HHHHHHHH-hhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhh
Confidence 34444444 568899999999999999999999999999999999999999999999999875443
No 99
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=89.12 E-value=3.1 Score=36.85 Aligned_cols=126 Identities=13% Similarity=0.055 Sum_probs=84.9
Q ss_pred HHHHHHHHHhhhC--CCCchHHHHHHHHHHHHHHHHHHHHH--HhhccCccchhhhhHHHHHHHHHH-HHHHHhhhhhcc
Q 021864 22 GVLLLNKYLLSNY--GFRYPIFLTMCHMTACSLLSYIAIAW--MKMVPMQTIRSRLQFLKISALSFV-FCISVVFGNVSL 96 (306)
Q Consensus 22 ~~~~~~k~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al 96 (306)
.+..+-|.-.++. +.+-|.+..+.-..- .+++++.... ....|+-..+...+....+..++. ..+.-+++-.|.
T Consensus 261 vY~vllk~~~~~eg~rvdi~lffGfvGLfn-llllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~ 339 (416)
T KOG2765|consen 261 VYTVLLKRKIGDEGERVDIQLFFGFVGLFN-LLLLWPPLIILDFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAV 339 (416)
T ss_pred HHHHHHHhhcccccccccHHHHHHHHHHHH-HHHHhHHHHHHHHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHH
Confidence 3444556666654 244344444433322 2222222111 113444444444444445455544 467788999999
Q ss_pred cccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccC
Q 021864 97 RFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGG 148 (306)
Q Consensus 97 ~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~ 148 (306)
-.+++-++++-.+.+....++...++.++++++..++|.+.+++|.+++...
T Consensus 340 ~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~ 391 (416)
T KOG2765|consen 340 LLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNIS 391 (416)
T ss_pred HhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecc
Confidence 9999999999999999999999999999999999999999999999988743
No 100
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=88.12 E-value=0.82 Score=38.59 Aligned_cols=127 Identities=16% Similarity=0.150 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHHhh
Q 021864 156 GFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLFNS 235 (306)
Q Consensus 156 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (306)
|.+.++.|+++++...+=.|+.- .-|++-...++.....+......+..+.+. +..+.+++|
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~-----~gDg~~fQw~~~~~i~~~g~~v~~~~~~p~-------------f~p~amlgG 62 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFD-----TGDGFFFQWVMCSGIFLVGLVVNLILGFPP-------------FYPWAMLGG 62 (254)
T ss_pred CchhHHHHHHHhcccceeeEecc-----CCCcHHHHHHHHHHHHHHHHHHHHhcCCCc-------------ceeHHHhhh
Confidence 56778889999999888888643 336666655555554444444443332222 122233343
Q ss_pred HHHHHHHHHHHHhhcccc-cchhhhhhhhhhHHHHhhhhh-hcCcc-----ccccccchhHHHHHHHHHhhh
Q 021864 236 ALAYFVNLTNFLVTKHTS-ALTLQVLGNAKGAVAVVVSIL-IFRNP-----VSVTGMLGYSLTVMGVILYSE 300 (306)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~v~~~~~~~~-~~~e~-----~~~~~~iG~~l~~~g~~l~~~ 300 (306)
.+=...|....-.++..| ++...+.+..+-+.....+-+ +||++ -++..++|.+++++|..++..
T Consensus 63 ~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~f 134 (254)
T PF07857_consen 63 ALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSF 134 (254)
T ss_pred hhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheee
Confidence 333334444444566655 444556677777777777754 67653 335789999999999998874
No 101
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=87.88 E-value=5.9 Score=28.31 Aligned_cols=68 Identities=12% Similarity=0.191 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHhhhhhcccccchhHHHHhh-hhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhh
Q 021864 78 ISALSFVFCISVVFGNVSLRFLPVSFNQAVG-ATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIA 145 (306)
Q Consensus 78 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~ 145 (306)
+.+.-+-|++..-.+-.|.+..+++.-.+++ ..+...-..++.+++||+++|....+-..+++++.++
T Consensus 38 WgIAffEY~l~VPANRiG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 38 WGIAFFEYCLQVPANRIGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred HHHHHHHHHHhCcchhhhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 3333333777766777777777776666665 2233333455778999999999999988887776543
No 102
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=87.33 E-value=1.2 Score=32.60 Aligned_cols=52 Identities=19% Similarity=0.213 Sum_probs=40.3
Q ss_pred HHhhcccccchhh-hhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHH
Q 021864 246 FLVTKHTSALTLQ-VLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVIL 297 (306)
Q Consensus 246 ~~~~~~~~~~~~s-~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l 297 (306)
+..+++.+-+.+. +.+.+.-+++.+.++++..|..+...++|+.+++.|+.+
T Consensus 59 ~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 59 FLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 3356666644444 456888899999998887777888999999999999764
No 103
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=85.68 E-value=0.32 Score=38.85 Aligned_cols=59 Identities=17% Similarity=0.246 Sum_probs=52.1
Q ss_pred HHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhh
Q 021864 242 NLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSE 300 (306)
Q Consensus 242 ~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~ 300 (306)
++.+..++++.+|..++.....+..+.-+++++.++|++...+++..++.+.|+....+
T Consensus 67 NY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay 125 (290)
T KOG4314|consen 67 NYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAY 125 (290)
T ss_pred CcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEe
Confidence 44445589999999999999999999999999999999999999999999998877654
No 104
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=83.62 E-value=22 Score=31.39 Aligned_cols=140 Identities=12% Similarity=0.106 Sum_probs=71.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHH-HhcccccchhhhccccchhHHHHH
Q 021864 153 HLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATL-IMEKNVVGITLALARDDVKIIWYL 231 (306)
Q Consensus 153 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 231 (306)
-..|+++-.+++++.+...+=.||.. + =+||.....+..-.....|... ...-|+.... ..+.+...++..
T Consensus 5 ii~Gii~h~iGg~~~~sfy~P~kkvk-----~-WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i--~~~~~~~~l~~~ 76 (344)
T PF06379_consen 5 IILGIIFHAIGGFASGSFYVPFKKVK-----G-WSWESYWLVQGIFSWLIVPWLWALLAIPDFFSI--YSATPASTLFWT 76 (344)
T ss_pred HHHHHHHHHHHHHHhhhhccchhhcC-----C-ccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHH--HHhCChhHHHHH
Confidence 36799999999999999999988753 2 3566665555554555556542 2222222111 112222222222
Q ss_pred H-HhhHHHHHHHHHHHHhhccccc-chhhhhhhhhhHHHHhhhhhhcC-------ccccccccchhHHHHHHHHHhhhh
Q 021864 232 L-FNSALAYFVNLTNFLVTKHTSA-LTLQVLGNAKGAVAVVVSILIFR-------NPVSVTGMLGYSLTVMGVILYSEA 301 (306)
Q Consensus 232 ~-~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~v~~~~~~~~~~~-------e~~~~~~~iG~~l~~~g~~l~~~~ 301 (306)
. .+.+-+. ....+-..+++.+- ...++..-+-.++..++-.++.| ++-...-++|.++++.|+.+..+.
T Consensus 77 ~l~G~lWGI-GgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A 154 (344)
T PF06379_consen 77 FLFGVLWGI-GGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA 154 (344)
T ss_pred HHHHHHHhc-chhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence 2 2222111 11222224555552 22333333333444444333322 222346789999999999987753
No 105
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.81 E-value=0.65 Score=40.11 Aligned_cols=118 Identities=15% Similarity=0.241 Sum_probs=78.2
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHH
Q 021864 151 SFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWY 230 (306)
Q Consensus 151 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (306)
+.+..|.++.+.+++.-+...++.|+-.++... .-...+.... .+. . ...||.
T Consensus 17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~----------------------~~~ra~~gg~---~yl-~-~~~Ww~ 69 (335)
T KOG2922|consen 17 SDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA----------------------SGLRAGEGGY---GYL-K-EPLWWA 69 (335)
T ss_pred cCceeeeeehhhccEEEeeehhhhHHHHHHHhh----------------------hcccccCCCc---chh-h-hHHHHH
Confidence 345778899999998888888888886532100 0000111100 011 1 123343
Q ss_pred HHHhhHHHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHh
Q 021864 231 LLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILY 298 (306)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~ 298 (306)
.++.-..+=..| |-+....++.-.+.++.+.-+.+.+++..+++|+++....+|+++++.|..+.
T Consensus 70 G~ltm~vGei~N---FaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~i 134 (335)
T KOG2922|consen 70 GMLTMIVGEIAN---FAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTI 134 (335)
T ss_pred HHHHHHHHhHhh---HHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEE
Confidence 333333343333 33567778888899999999999999999999999999999999999997654
No 106
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=78.68 E-value=15 Score=31.48 Aligned_cols=64 Identities=16% Similarity=0.158 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhh
Q 021864 236 ALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYS 299 (306)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~ 299 (306)
++-...+..++..+..+++....+.--...+++.+++..+++.+++..||.|+..+..|+....
T Consensus 94 l~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg 157 (372)
T KOG3912|consen 94 LCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVG 157 (372)
T ss_pred HHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheee
Confidence 3333344455557778888888888888899999999999999999999999999999987643
No 107
>PRK02237 hypothetical protein; Provisional
Probab=76.79 E-value=14 Score=26.56 Aligned_cols=45 Identities=9% Similarity=0.082 Sum_probs=36.4
Q ss_pred HHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhcc
Q 021864 103 FNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG 147 (306)
Q Consensus 103 ~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~ 147 (306)
.+..=.....+.+.+..+..-++||++.++++..++++|+.+...
T Consensus 61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 344444556677778899999999999999999999999987653
No 108
>PRK02237 hypothetical protein; Provisional
Probab=75.12 E-value=22 Score=25.61 Aligned_cols=47 Identities=11% Similarity=0.046 Sum_probs=39.8
Q ss_pred chhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhh
Q 021864 255 LTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEA 301 (306)
Q Consensus 255 ~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~ 301 (306)
-.++..+-+-.+.+.+.++.+-|++++...++|..+++.|+.+..+.
T Consensus 60 RvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 60 RVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 34566677788899999999999999999999999999999776443
No 109
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=74.29 E-value=10 Score=27.20 Aligned_cols=47 Identities=13% Similarity=0.076 Sum_probs=40.1
Q ss_pred chhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhh
Q 021864 255 LTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEA 301 (306)
Q Consensus 255 ~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~ 301 (306)
-.++..+-+-.+.+.+.++.+-+++++...++|..+++.|+.+..+.
T Consensus 58 RvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 58 RVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred hHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 34456677788999999999999999999999999999998876544
No 110
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=66.46 E-value=1.9 Score=36.51 Aligned_cols=99 Identities=9% Similarity=0.026 Sum_probs=0.0
Q ss_pred cchhHHHHhhhhhHHHHHHHHHHH-hcce-ecccchhhhhhhhhhhhhhccC--CCcchHHHHHHHHHHHHHHHHHHHHH
Q 021864 99 LPVSFNQAVGATTPFFTAVFAYLM-TLKR-EAWLTYVTLIPVVTGVIIASGG--EPSFHLFGFLMCIAATAARALKSVLQ 174 (306)
Q Consensus 99 ~~~~~~~~i~~~~pv~~~l~~~~~-~~~~-~~~~~~~~i~~~~~G~~l~~~~--~~~~~~~G~~~~l~a~~~~a~~~v~~ 174 (306)
.+-+..+++.+...+.+.++-.++ +|+| .-..-..|++++++-..+...= ..+.-++|+++.+++....-.-+.++
T Consensus 47 ~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~l~~lLaL~vW~Ym 126 (381)
T PF05297_consen 47 LTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILFLCCLLALGVWFYM 126 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444445566666665555544333 3444 3444556666655554444321 23333567666555544443344443
Q ss_pred HHHhccCCCCCChHHHHHHHHHHHHH
Q 021864 175 GILLSSEGEKLNSMNLLLYMAPIAVV 200 (306)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (306)
. ++ ++..-+-|+++.+...+...
T Consensus 127 ~-lL--r~~GAs~WtiLaFcLAF~La 149 (381)
T PF05297_consen 127 W-LL--RELGASFWTILAFCLAFLLA 149 (381)
T ss_dssp --------------------------
T ss_pred H-HH--HHhhhHHHHHHHHHHHHHHH
Confidence 3 33 34556678877665544433
No 111
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=64.21 E-value=10 Score=27.14 Aligned_cols=44 Identities=16% Similarity=0.151 Sum_probs=36.6
Q ss_pred HHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhcc
Q 021864 104 NQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASG 147 (306)
Q Consensus 104 ~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~ 147 (306)
+..=.....+.+.+..+.+-++||++.++++..++++|+.+...
T Consensus 60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 34444566777888899999999999999999999999987764
No 112
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=60.87 E-value=3.5 Score=34.62 Aligned_cols=132 Identities=11% Similarity=0.089 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHHHhcccccchhhhccccchhHHHHHHH
Q 021864 154 LFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITLALARDDVKIIWYLLF 233 (306)
Q Consensus 154 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (306)
+.|..++-.-++|....+...+.+.+ +.--.|...++.....-+++..|...+...... .-+.. -++
T Consensus 17 li~~~LGQiLSL~~t~~a~tss~la~--k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~~~--------~~~~h---Yil 83 (336)
T KOG2766|consen 17 LIGLGLGQILSLLITSTAFTSSELAR--KGINAPTSQTFLNYVLLALVYGPIMLFRRKYIK--------AKWRH---YIL 83 (336)
T ss_pred hheeeHHHHHHHHHHcchhhhHHHHh--ccCCCccHHHHHHHHHHHHHHhhHHHhhhHHHH--------HHHHH---hhh
Confidence 44555555555555555555555542 212234555555555555666666654431110 00111 112
Q ss_pred hhHHHHHHHHHHHHhhcccccchhhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHh
Q 021864 234 NSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILY 298 (306)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~ 298 (306)
.++.-.-.|+....+.++++-.....+..-..+...+++|++++.+..+.++.|.++++.|+...
T Consensus 84 la~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~Gvvmv 148 (336)
T KOG2766|consen 84 LAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMV 148 (336)
T ss_pred eeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEE
Confidence 22222333444455677888888888888888999999999999999999999999999998754
No 113
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=59.85 E-value=1.3e+02 Score=26.78 Aligned_cols=226 Identities=12% Similarity=0.107 Sum_probs=120.5
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhcccccchhHHHHhh-hhhHHHHHHHHHHHhc-------ceecccchhhhhhhhhhhhh
Q 021864 73 LQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVG-ATTPFFTAVFAYLMTL-------KREAWLTYVTLIPVVTGVII 144 (306)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pv~~~l~~~~~~~-------~~~~~~~~~~i~~~~~G~~l 144 (306)
+........|++.......+-.+.+|+..+..+-+. .+.-++-.++--++.+ ++-....++++.+.++|+++
T Consensus 71 ~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai 150 (344)
T PF06379_consen 71 STLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAI 150 (344)
T ss_pred hHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHH
Confidence 345566778888888888899999998777665433 3333333333333332 22344677899999999998
Q ss_pred hcc----CC-------Ccch-HHHHHHHHHHHHHHHHHHHHHHHHhcc----CCCCCChHHH----HHHHHHHHHHHHHH
Q 021864 145 ASG----GE-------PSFH-LFGFLMCIAATAARALKSVLQGILLSS----EGEKLNSMNL----LLYMAPIAVVLLLP 204 (306)
Q Consensus 145 ~~~----~~-------~~~~-~~G~~~~l~a~~~~a~~~v~~~~~~~~----~~~~~~~~~~----~~~~~~~~~~~~~~ 204 (306)
... .| .+++ ..|.+.++.+.+.+|..+.-.+.-.+- .+.+.+|+.. ......-+++.-+.
T Consensus 151 ~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~ 230 (344)
T PF06379_consen 151 CGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLI 230 (344)
T ss_pred HhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHH
Confidence 862 11 1233 469999999999999988877653210 1122233211 11222223333344
Q ss_pred HHHHhc---cccc-chhhhcccc-chhHHHHHHHhhHHHHHHHHHHHHhhcccc----cchhhhhhhhhhHHHHhhhhhh
Q 021864 205 ATLIME---KNVV-GITLALARD-DVKIIWYLLFNSALAYFVNLTNFLVTKHTS----ALTLQVLGNAKGAVAVVVSILI 275 (306)
Q Consensus 205 ~~~~~~---~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~s~~~~~~~v~~~~~~~~~ 275 (306)
..++.. .... ..+...... -........+.++.=|.....+-..-.+.+ .+.-.+...+..+++-+.+...
T Consensus 231 yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~l 310 (344)
T PF06379_consen 231 YCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLIL 310 (344)
T ss_pred HHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHHH
Confidence 433321 1110 000010011 112223333333333333222222334444 4455566667777777777765
Q ss_pred cCc------cccccccchhHHHHHHHHHhh
Q 021864 276 FRN------PVSVTGMLGYSLTVMGVILYS 299 (306)
Q Consensus 276 ~~e------~~~~~~~iG~~l~~~g~~l~~ 299 (306)
+| +.-..-++|+++++.++.+..
T Consensus 311 -kEWKg~s~kt~~vl~~G~~vlI~s~~ivG 339 (344)
T PF06379_consen 311 -KEWKGASKKTIRVLVLGIAVLILSVVIVG 339 (344)
T ss_pred -HHhccCCcccHHHHHHHHHHHHHHHHHHh
Confidence 55 222445788888888877654
No 114
>KOG1623 consensus Multitransmembrane protein [General function prediction only]
Probab=59.47 E-value=63 Score=27.15 Aligned_cols=56 Identities=14% Similarity=0.150 Sum_probs=41.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHHHH
Q 021864 152 FHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATL 207 (306)
Q Consensus 152 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (306)
.+..|.+........+|.-..-.++..|+|+.+.-|..+.....+.+...++-...
T Consensus 125 ~~~lG~vc~~~nI~~~~sPL~~m~~VIktkSvE~mPf~Ls~a~fl~a~~W~lYGll 180 (243)
T KOG1623|consen 125 VSVLGIVCAVFNISMFAAPLSVIRKVIKTKSVEYMPFPLSFALFLVAVQWLLYGLL 180 (243)
T ss_pred eeeeehhhhhhhHHhhhccHHhhhhheecCceeeechHHHHHHHHHHHHHHHHHHH
Confidence 55789999999999999999999998876666666766766666666555554443
No 115
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=58.76 E-value=65 Score=23.07 Aligned_cols=44 Identities=14% Similarity=0.156 Sum_probs=35.3
Q ss_pred HHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccC
Q 021864 105 QAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGG 148 (306)
Q Consensus 105 ~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~ 148 (306)
..=.....+.+.+..+..-+++|++.++.+..++++|+.++...
T Consensus 62 AAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 62 AAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred HHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 33445566677788888999999999999999999998876643
No 116
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=57.71 E-value=15 Score=26.21 Aligned_cols=70 Identities=17% Similarity=0.189 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccchhHHHHhh-hhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhh
Q 021864 75 FLKISALSFVFCISVVFGNVSLRFLPVSFNQAVG-ATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIA 145 (306)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~ 145 (306)
|++.+|..+-. .+..+++.-+++.|.+.+.-+. +++-.|+.+.++.+..|....+.+.+..+.+.|+.+.
T Consensus 53 w~Y~iPFllNq-cgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 53 WEYLIPFLLNQ-CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHHHHHHHH-hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 34455544433 4555677777777777665444 6788899999988877778888889999999987653
No 117
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=54.60 E-value=7.8 Score=27.70 Aligned_cols=29 Identities=10% Similarity=0.201 Sum_probs=25.3
Q ss_pred HhhhhhhcCccccccccchhHHHHHHHHH
Q 021864 269 VVVSILIFRNPVSVTGMLGYSLTVMGVIL 297 (306)
Q Consensus 269 ~~~~~~~~~e~~~~~~~iG~~l~~~g~~l 297 (306)
..++.+.++|++++..+.|.++++.+++.
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 56778899999999999999999888764
No 118
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=51.87 E-value=1.2e+02 Score=26.07 Aligned_cols=108 Identities=11% Similarity=0.014 Sum_probs=72.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhh----ccCccchhhhhHHHHHHHHHHHHHHHhhhhhcccccchhHHHHhhhhhHHH
Q 021864 39 PIFLTMCHMTACSLLSYIAIAWMKM----VPMQTIRSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFF 114 (306)
Q Consensus 39 p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~ 114 (306)
-|.++++.-+.+.++..+....... ...+..+..+-|..+...|++.+.-+.-...=++.++|-+..+-......-
T Consensus 215 iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~a 294 (347)
T KOG1442|consen 215 IWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAA 294 (347)
T ss_pred ehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHH
Confidence 5788999999998888877665332 222333334445556666777555555555556667776666666555666
Q ss_pred HHHHHHHHhcceecccchhhhhhhhhhhhhhc
Q 021864 115 TAVFAYLMTLKREAWLTYVTLIPVVTGVIIAS 146 (306)
Q Consensus 115 ~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~ 146 (306)
=.+++..+++|.-+-..|-+.++++.|.....
T Consensus 295 QTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT 326 (347)
T KOG1442|consen 295 QTVLAVAYYSETKSGLWWTSNIVVLVGSLAYT 326 (347)
T ss_pred HHHHHHHHHHHHhhhheeeeeEEEEehhHHHH
Confidence 66778888899888888888888888766544
No 119
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=44.50 E-value=2.5e+02 Score=25.60 Aligned_cols=65 Identities=12% Similarity=-0.025 Sum_probs=32.1
Q ss_pred hhhhhhhccCCCcch-HHHHHHHHHHHHH-HHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHH
Q 021864 139 VTGVIIASGGEPSFH-LFGFLMCIAATAA-RALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPA 205 (306)
Q Consensus 139 ~~G~~l~~~~~~~~~-~~G~~~~l~a~~~-~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (306)
++|.+-.+......+ ....+.++++... +-....+.||.. .++..+...+=......+.+...++
T Consensus 259 laGlVaita~~~~v~p~~A~~iG~iag~i~~~~~~~l~~~~~--iDD~~~~~~vHg~~Gi~G~i~~glf 325 (399)
T PF00909_consen 259 LAGLVAITAGAGYVTPWGALLIGAIAGLISYFGVSWLLKRLK--IDDPVGAFAVHGVGGIWGTILTGLF 325 (399)
T ss_dssp HHHHHHHTTTTTTS-HHHHHHHHHHHHHHHHHHHHHHHHHHT--S-HTTGHHHHCHHHHHHHHHHHHHH
T ss_pred hhhhhheecccCCCcHHHHHHhhhhHhhhhhhheecccceeE--eccccceEeeeeccHHHHHHHHHHH
Confidence 455554443333333 3455666666443 433434666654 4455566665555666665544433
No 120
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=40.92 E-value=60 Score=25.32 Aligned_cols=41 Identities=22% Similarity=0.145 Sum_probs=32.0
Q ss_pred hhhhhhhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021864 138 VVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILL 178 (306)
Q Consensus 138 ~~~G~~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~ 178 (306)
.+.|+++....+.+.-......++.+++.+++..++...++
T Consensus 115 aVLgvaLln~~~~~~f~qsv~~gf~a~lGfslvmvlfA~iR 155 (193)
T COG4657 115 AVLGVALLNINEGHNFLQSVVYGFGAALGFSLVMVLFAAIR 155 (193)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHhhhHhhHHHHHHHHHHHH
Confidence 35678888777766556678889999999999888887766
No 121
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=36.93 E-value=66 Score=23.01 Aligned_cols=47 Identities=11% Similarity=0.060 Sum_probs=37.8
Q ss_pred hhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhhcc
Q 021864 257 LQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEAKK 303 (306)
Q Consensus 257 ~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~~~ 303 (306)
++..+-+-.+.+.+..+..=+.+++...++|..+++.|+.+.....+
T Consensus 61 YAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~pR 107 (109)
T COG1742 61 YAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGPR 107 (109)
T ss_pred HHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCCC
Confidence 34555567788889999998899999999999999999877655433
No 122
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=34.77 E-value=27 Score=20.22 Aligned_cols=19 Identities=21% Similarity=0.518 Sum_probs=11.8
Q ss_pred chhHHHHHHHHHhhhhccc
Q 021864 286 LGYSLTVMGVILYSEAKKR 304 (306)
Q Consensus 286 iG~~l~~~g~~l~~~~~~~ 304 (306)
+|.++++++.+++-+.||+
T Consensus 21 V~vI~~vl~~~l~~~~rR~ 39 (40)
T PF08693_consen 21 VGVIIIVLGAFLFFWYRRK 39 (40)
T ss_pred hHHHHHHHHHHhheEEecc
Confidence 4556666777777655554
No 123
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=33.81 E-value=3.9e+02 Score=24.75 Aligned_cols=57 Identities=26% Similarity=0.216 Sum_probs=37.0
Q ss_pred HHhcceecccchh--hhhhhhhhhhhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 021864 121 LMTLKREAWLTYV--TLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLS 179 (306)
Q Consensus 121 ~~~~~~~~~~~~~--~i~~~~~G~~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~ 179 (306)
++.|+|+++.|+. |+++++.=+.+++.+| +-.++....+.|..|-.+-..+.+...+
T Consensus 317 ~~~~~~iHpiQY~LVGlAl~lFYlLLLSlSE--hi~F~~AYliAa~a~i~Li~~Y~~~vl~ 375 (430)
T PF06123_consen 317 LLSKLRIHPIQYLLVGLALVLFYLLLLSLSE--HIGFNLAYLIAALACIGLISLYLSSVLK 375 (430)
T ss_pred HHhcCcccHHHHHHHHHHHHHHHHHHHHHHh--hhchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4456777887774 4444444444445444 2335667778888888888888888884
No 124
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=32.79 E-value=98 Score=27.02 Aligned_cols=133 Identities=9% Similarity=-0.004 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHHHHHHHHHH-HHH--hcc----cccchhhhccccchhHHHHHHHh
Q 021864 162 AATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPA-TLI--MEK----NVVGITLALARDDVKIIWYLLFN 234 (306)
Q Consensus 162 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~ 234 (306)
++.+||+..-..+|..-+ +-+++.+...-| .++.+..... ++- ..+ ..+....+..+.+.........+
T Consensus 3 itmlcwGSW~nt~kL~~r--~gR~~qh~Y~DY--sig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aG 78 (336)
T PF07168_consen 3 ITMLCWGSWPNTQKLAER--RGRLPQHFYWDY--SIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAG 78 (336)
T ss_pred eehhhhcChHHHHHHHHh--cCCccceehhHH--HHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHh
Confidence 466788887777776542 223322322222 2332222111 111 112 11223334445555555555666
Q ss_pred hHHHHHHHHHHHHhhcccccchhh-hhhhhhhHHHHhhhhhhcCccccc--cccchhHHHHHHHHHhh
Q 021864 235 SALAYFVNLTNFLVTKHTSALTLQ-VLGNAKGAVAVVVSILIFRNPVSV--TGMLGYSLTVMGVILYS 299 (306)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~s-~~~~~~~v~~~~~~~~~~~e~~~~--~~~iG~~l~~~g~~l~~ 299 (306)
|++--..|++...++...+-..+- +...+.-+..+.+.++. +++.+. .-..|..++++++++-.
T Consensus 79 GvvfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfl-d~~~n~a~iLF~GV~cf~iAI~lga 145 (336)
T PF07168_consen 79 GVVFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFL-DPKINRAEILFPGVACFLIAIILGA 145 (336)
T ss_pred hHhhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeec-cCCCCCceEEEccHHHHHHHHHHHH
Confidence 665555666555555544422211 11222333444455544 556553 45568888777777643
No 125
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=31.58 E-value=3.4e+02 Score=23.45 Aligned_cols=55 Identities=13% Similarity=0.118 Sum_probs=44.5
Q ss_pred ccccchhHHHHhhhhhHHHHHHHHHHHhcceecccchhhhhhhhhhhhhhccCCC
Q 021864 96 LRFLPVSFNQAVGATTPFFTAVFAYLMTLKREAWLTYVTLIPVVTGVIIASGGEP 150 (306)
Q Consensus 96 l~~~~~~~~~~i~~~~pv~~~l~~~~~~~~~~~~~~~~~i~~~~~G~~l~~~~~~ 150 (306)
.+.-++.++..+....--.+.++++++..|++|....-+..+++.|+.+-..++.
T Consensus 281 I~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~ 335 (367)
T KOG1582|consen 281 IKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKR 335 (367)
T ss_pred HHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCC
Confidence 3445666777777777788999999999999999999999999999998775553
No 126
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=30.71 E-value=40 Score=21.88 Aligned_cols=20 Identities=20% Similarity=0.454 Sum_probs=15.7
Q ss_pred ccchhHHHHHHHHHhhhhcc
Q 021864 284 GMLGYSLTVMGVILYSEAKK 303 (306)
Q Consensus 284 ~~iG~~l~~~g~~l~~~~~~ 303 (306)
-+++++++++|.++|....+
T Consensus 6 iLi~ICVaii~lIlY~iYnr 25 (68)
T PF05961_consen 6 ILIIICVAIIGLILYGIYNR 25 (68)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 46789999999999975444
No 127
>PF09964 DUF2198: Uncharacterized protein conserved in bacteria (DUF2198); InterPro: IPR019242 This family of various hypothetical archaeal proteins has no known function.
Probab=30.28 E-value=1.7e+02 Score=19.52 Aligned_cols=52 Identities=12% Similarity=0.068 Sum_probs=26.6
Q ss_pred cceecccchhhhhhhhhhhhhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021864 124 LKREAWLTYVTLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILL 178 (306)
Q Consensus 124 ~~~~~~~~~~~i~~~~~G~~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~ 178 (306)
=.|+|..+++|.++.++=++......-..++ ...++..++......+.++..
T Consensus 17 FtrVT~n~~vg~~lt~~Li~ASvykGyt~~~---~ii~iD~~Sl~aGf~~a~~m~ 68 (74)
T PF09964_consen 17 FTRVTYNHYVGTILTVALIAASVYKGYTHTW---WIIFIDAVSLTAGFLYAKKML 68 (74)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhccccch---HHHHHHHHHHHHHHHHHHHHH
Confidence 3678999999988665443333333333332 122333344444444445444
No 128
>PF06946 Phage_holin_5: Phage holin; InterPro: IPR009708 This entry represents the Bacteriophage A118, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=28.20 E-value=2.1e+02 Score=20.03 Aligned_cols=29 Identities=17% Similarity=0.364 Sum_probs=20.4
Q ss_pred HHHHHhcceecccchhhhhhhhhhhhhhc
Q 021864 118 FAYLMTLKREAWLTYVTLIPVVTGVIIAS 146 (306)
Q Consensus 118 ~~~~~~~~~~~~~~~~~i~~~~~G~~l~~ 146 (306)
+--.+.|.+.-..+|+..+.+++|+++-.
T Consensus 21 lVq~IkkT~~v~~K~iPlIs~viGilLG~ 49 (93)
T PF06946_consen 21 LVQAIKKTKVVPNKWIPLISVVIGILLGA 49 (93)
T ss_pred HHHHHHHhccCCcchhhHHHHHHHHHHHH
Confidence 34455555556788999988888888644
No 129
>PRK11715 inner membrane protein; Provisional
Probab=27.49 E-value=5e+02 Score=24.08 Aligned_cols=56 Identities=23% Similarity=0.148 Sum_probs=36.1
Q ss_pred Hhcceecccchh--hhhhhhhhhhhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 021864 122 MTLKREAWLTYV--TLIPVVTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLS 179 (306)
Q Consensus 122 ~~~~~~~~~~~~--~i~~~~~G~~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~ 179 (306)
+.|.|++..|+. |+.+++.=+.+++.+| +-.++....+.|..|-.+-..+.....+
T Consensus 324 ~~~~~iHpiQYlLVGlAl~lFYLLLLSlSE--HigF~~AYliAa~a~v~li~~Y~~~vl~ 381 (436)
T PRK11715 324 LKKLRIHPVQYLLVGLALVLFYLLLLSLSE--HIGFTLAYLIAALACVLLIGFYLSAVLR 381 (436)
T ss_pred hcCceecHHHHHHHHHHHHHHHHHHHHHHh--hhchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 346677777774 4444444444555444 2335667778888888888888888873
No 130
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=27.09 E-value=2.4e+02 Score=21.01 Aligned_cols=51 Identities=16% Similarity=0.204 Sum_probs=33.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCchHHHHHHHHHHHHHHHHHHH
Q 021864 7 LFTFGLVAAWYSSNIGVLLLNKYLLSNYGFRYPIFLTMCHMTACSLLSYIAI 58 (306)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 58 (306)
....++.....++++...++-|......+ +||++++-........+.+.+.
T Consensus 56 ~~L~v~~vv~V~s~v~N~VL~K~~~~~m~-NY~fFL~QlTt~gyvpIffaV~ 106 (130)
T PF08627_consen 56 FKLLVYVVVYVVSGVINRVLYKKMTNPMK-NYPFFLNQLTTFGYVPIFFAVV 106 (130)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHhcccceehHHHHHH
Confidence 55666666677777777777777776621 5788887776655555555443
No 131
>PF03729 DUF308: Short repeat of unknown function (DUF308); InterPro: IPR005325 This represents a group of short repeats that occurs in a limited number of membrane proteins. It may divide further in short repeats of around 7-10 residues of the pattern G-#-X(2)-#(2)-X (#=hydrophobic).
Probab=26.86 E-value=1.7e+02 Score=18.48 Aligned_cols=28 Identities=11% Similarity=0.326 Sum_probs=17.6
Q ss_pred hhhhhhhhhhhhhccCCCcchHHHHHHH
Q 021864 133 VTLIPVVTGVIIASGGEPSFHLFGFLMC 160 (306)
Q Consensus 133 ~~i~~~~~G~~l~~~~~~~~~~~G~~~~ 160 (306)
.|+.....|+.+...++...+......+
T Consensus 2 ~Gil~iv~Gi~~l~~p~~~~~~~~~i~g 29 (72)
T PF03729_consen 2 SGILFIVLGILLLFNPDASLAALAIILG 29 (72)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 4677788888888776655444433333
No 132
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=24.90 E-value=1.6e+02 Score=21.21 Aligned_cols=53 Identities=19% Similarity=0.212 Sum_probs=36.3
Q ss_pred HHhhcccccch-hhhhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHh
Q 021864 246 FLVTKHTSALT-LQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILY 298 (306)
Q Consensus 246 ~~~~~~~~~~~-~s~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~ 298 (306)
+..+++.+-.. +-+.+.+.-+++.+.+...-.|......+.|..++++|+.+.
T Consensus 70 ~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 70 YLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 33456655333 335666777888888887744445567899999999998763
No 133
>PF15055 DUF4536: Domain of unknown function (DUF4536)
Probab=24.24 E-value=53 Score=19.78 Aligned_cols=21 Identities=33% Similarity=0.507 Sum_probs=15.8
Q ss_pred cchhHHHHHHHHHhhhhcccc
Q 021864 285 MLGYSLTVMGVILYSEAKKRS 305 (306)
Q Consensus 285 ~iG~~l~~~g~~l~~~~~~~~ 305 (306)
+-|..++-.|.++|...|++.
T Consensus 8 vSG~GLig~G~Yv~~~ark~~ 28 (47)
T PF15055_consen 8 VSGGGLIGAGAYVYAQARKRM 28 (47)
T ss_pred ecccchHHHHHHHHHHHhhcc
Confidence 346778888999998777764
No 134
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=23.59 E-value=61 Score=17.43 Aligned_cols=13 Identities=31% Similarity=0.304 Sum_probs=6.6
Q ss_pred cccccchhHHHHH
Q 021864 281 SVTGMLGYSLTVM 293 (306)
Q Consensus 281 ~~~~~iG~~l~~~ 293 (306)
+...++|..++..
T Consensus 11 ~~~~~~G~~l~~~ 23 (34)
T TIGR01167 11 SLLLLLGLLLLGL 23 (34)
T ss_pred HHHHHHHHHHHHH
Confidence 4455666644333
No 135
>PHA03049 IMV membrane protein; Provisional
Probab=22.55 E-value=71 Score=20.68 Aligned_cols=22 Identities=18% Similarity=0.395 Sum_probs=16.3
Q ss_pred cccchhHHHHHHHHHhhhhccc
Q 021864 283 TGMLGYSLTVMGVILYSEAKKR 304 (306)
Q Consensus 283 ~~~iG~~l~~~g~~l~~~~~~~ 304 (306)
.-+++++++++|.++|...+|+
T Consensus 5 ~~l~iICVaIi~lIvYgiYnkk 26 (68)
T PHA03049 5 IILVIICVVIIGLIVYGIYNKK 26 (68)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc
Confidence 3467889999999998754443
No 136
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=22.24 E-value=4.6e+02 Score=21.80 Aligned_cols=76 Identities=5% Similarity=-0.045 Sum_probs=32.1
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhhhhcccccchhHHHHhhhhhHHHHH--HH-HHHHhcceecccchhhhhhhhhhhhhh
Q 021864 70 RSRLQFLKISALSFVFCISVVFGNVSLRFLPVSFNQAVGATTPFFTA--VF-AYLMTLKREAWLTYVTLIPVVTGVIIA 145 (306)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~--l~-~~~~~~~~~~~~~~~~i~~~~~G~~l~ 145 (306)
+++..+....|+=+|...-....-......+.+...+=.....+|.. +. +.+..+.+.+.....+-.+.+.|...+
T Consensus 97 s~~t~lal~~PCPvCl~Ai~~S~~l~a~~~~~s~~~ig~~~g~if~i~il~ss~i~r~~~~~~p~~LG~~Mi~~GlyfL 175 (224)
T PF09930_consen 97 SRRTFLALSLPCPVCLTAIFFSIMLLAPSIGLSGWEIGLVLGLIFFILILLSSFIFRRLKKPYPIILGNFMIFLGLYFL 175 (224)
T ss_pred cccchhhhhcCchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHH
Confidence 34444444555544543333333333333444333333333222222 22 222333344445566666666665533
No 137
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=21.46 E-value=49 Score=28.40 Aligned_cols=43 Identities=7% Similarity=0.196 Sum_probs=37.3
Q ss_pred hhhhhhhHHHHhhhhhhcCccccccccchhHHHHHHHHHhhhh
Q 021864 259 VLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVMGVILYSEA 301 (306)
Q Consensus 259 ~~~~~~~v~~~~~~~~~~~e~~~~~~~iG~~l~~~g~~l~~~~ 301 (306)
+.-.-.++.+++.++++.|.+.+..|+....++-+|+++.+..
T Consensus 96 IfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~ 138 (330)
T KOG1583|consen 96 IFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLF 138 (330)
T ss_pred EEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEee
Confidence 4445578899999999999999999999999999999987654
No 138
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=21.02 E-value=78 Score=18.98 Aligned_cols=18 Identities=6% Similarity=0.371 Sum_probs=11.1
Q ss_pred hhHHHHHHHHHhhhhccc
Q 021864 287 GYSLTVMGVILYSEAKKR 304 (306)
Q Consensus 287 G~~l~~~g~~l~~~~~~~ 304 (306)
-..++++|++++.+.+++
T Consensus 17 ~~~~~F~gi~~w~~~~~~ 34 (49)
T PF05545_consen 17 LFFVFFIGIVIWAYRPRN 34 (49)
T ss_pred HHHHHHHHHHHHHHcccc
Confidence 345566777777765553
No 139
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=20.72 E-value=3e+02 Score=19.09 Aligned_cols=57 Identities=9% Similarity=0.026 Sum_probs=34.0
Q ss_pred HHHHhcceecccchhhhhhh------hhhhhhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021864 119 AYLMTLKREAWLTYVTLIPV------VTGVIIASGGEPSFHLFGFLMCIAATAARALKSVLQGILL 178 (306)
Q Consensus 119 ~~~~~~~~~~~~~~~~i~~~------~~G~~l~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~ 178 (306)
-.+-.+|++|+|..++=.+. .+|.+++..+|.+.- .+.++.+++.-+-|......+.
T Consensus 22 k~L~s~Epit~RL~iGR~ilGs~~S~~Aga~Li~~Pdl~pl---Av~GlgsalGI~G~q~vE~~lr 84 (89)
T PF04550_consen 22 KVLASNEPITLRLFIGRVILGSAVSVVAGAALIQFPDLPPL---AVIGLGSALGIAGYQAVEAWLR 84 (89)
T ss_pred HHHccCCCCchhHHhHHHHHhhHHHHHHHHHHhcCCCCCHH---HHHHHHHHHHhhhHHHHHHHHH
Confidence 33445788888877765543 455555556664432 3556666666666666655544
Done!