Query 021866
Match_columns 306
No_of_seqs 265 out of 1976
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 06:16:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021866.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021866hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 4.7E-88 1E-92 585.0 19.7 301 6-306 2-303 (303)
2 KOG0373 Serine/threonine speci 100.0 2E-79 4.4E-84 523.8 20.7 302 5-306 4-306 (306)
3 PTZ00239 serine/threonine prot 100.0 2.1E-76 4.6E-81 545.3 31.7 301 6-306 2-303 (303)
4 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 3.7E-76 8E-81 540.6 29.8 284 7-290 2-285 (285)
5 cd07420 MPP_RdgC Drosophila me 100.0 8.6E-76 1.9E-80 543.8 30.6 284 3-287 3-321 (321)
6 PTZ00480 serine/threonine-prot 100.0 2.2E-74 4.9E-79 533.6 30.8 286 6-292 10-304 (320)
7 cd07416 MPP_PP2B PP2B, metallo 100.0 1.7E-73 3.8E-78 527.9 31.1 286 6-293 2-301 (305)
8 cd07417 MPP_PP5_C PP5, C-termi 100.0 7.4E-74 1.6E-78 531.6 28.5 290 4-294 13-309 (316)
9 KOG0374 Serine/threonine speci 100.0 3.4E-74 7.4E-79 534.1 24.6 284 6-289 8-303 (331)
10 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 1.8E-73 3.8E-78 524.8 27.9 282 7-289 2-292 (293)
11 PTZ00244 serine/threonine-prot 100.0 3E-73 6.6E-78 522.7 28.9 281 7-288 4-293 (294)
12 KOG0371 Serine/threonine prote 100.0 5.7E-73 1.2E-77 494.0 16.3 301 6-306 19-319 (319)
13 smart00156 PP2Ac Protein phosp 100.0 3.4E-71 7.4E-76 505.6 28.7 269 20-289 1-270 (271)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 2.5E-69 5.5E-74 507.6 30.1 292 3-294 8-372 (377)
15 cd07419 MPP_Bsu1_C Arabidopsis 100.0 2.5E-68 5.4E-73 495.3 28.7 271 18-288 19-311 (311)
16 KOG0375 Serine-threonine phosp 100.0 7.4E-69 1.6E-73 486.2 14.4 288 6-295 47-348 (517)
17 KOG0377 Protein serine/threoni 100.0 1E-57 2.2E-62 422.3 14.2 287 5-292 119-435 (631)
18 KOG0376 Serine-threonine phosp 100.0 1E-51 2.2E-56 389.8 14.2 290 3-293 166-462 (476)
19 cd00144 MPP_PPP_family phospho 100.0 1E-36 2.2E-41 270.7 21.6 214 50-274 1-224 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 100.0 3.6E-28 7.9E-33 219.4 19.4 192 47-279 1-226 (245)
21 cd07425 MPP_Shelphs Shewanella 100.0 6.5E-28 1.4E-32 212.7 15.5 178 50-261 1-198 (208)
22 cd07423 MPP_PrpE Bacillus subt 99.9 4.2E-26 9E-31 204.7 18.7 200 47-278 1-222 (234)
23 cd07413 MPP_PA3087 Pseudomonas 99.9 3.4E-26 7.3E-31 203.7 17.6 116 50-168 2-143 (222)
24 PRK00166 apaH diadenosine tetr 99.9 6.9E-26 1.5E-30 207.2 18.3 219 47-278 1-261 (275)
25 cd07421 MPP_Rhilphs Rhilph pho 99.9 2.6E-25 5.6E-30 202.4 18.1 189 47-263 2-282 (304)
26 PRK11439 pphA serine/threonine 99.9 4.4E-25 9.5E-30 196.1 16.3 178 47-262 17-208 (218)
27 PHA02239 putative protein phos 99.9 4.7E-25 1E-29 197.6 16.4 175 47-262 1-221 (235)
28 cd07422 MPP_ApaH Escherichia c 99.9 3E-25 6.5E-30 201.0 13.1 122 49-174 1-128 (257)
29 TIGR00668 apaH bis(5'-nucleosy 99.9 3.8E-25 8.2E-30 201.0 11.6 123 47-173 1-129 (279)
30 cd07424 MPP_PrpA_PrpB PrpA and 99.9 3.1E-23 6.8E-28 182.6 19.1 181 47-260 1-195 (207)
31 PRK09968 serine/threonine-spec 99.9 7.7E-22 1.7E-26 175.2 13.9 116 47-168 15-144 (218)
32 PF00149 Metallophos: Calcineu 99.5 5E-13 1.1E-17 109.7 10.8 159 48-241 2-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.4 1.6E-11 3.5E-16 102.7 14.5 59 48-118 1-59 (155)
34 PRK09453 phosphodiesterase; Pr 99.3 6.5E-11 1.4E-15 102.1 15.1 69 47-119 1-77 (182)
35 PF12850 Metallophos_2: Calcin 99.3 7.1E-11 1.5E-15 98.1 11.8 123 47-244 1-123 (156)
36 TIGR00040 yfcE phosphoesterase 99.2 1.5E-10 3.3E-15 97.4 13.5 63 47-118 1-64 (158)
37 cd07397 MPP_DevT Myxococcus xa 99.2 2.6E-10 5.6E-15 102.1 11.3 157 48-242 2-208 (238)
38 cd07379 MPP_239FB Homo sapiens 99.1 2.5E-10 5.4E-15 93.6 9.3 118 48-246 1-120 (135)
39 cd07388 MPP_Tt1561 Thermus the 99.1 8.2E-09 1.8E-13 92.0 18.0 71 47-118 5-75 (224)
40 COG0639 ApaH Diadenosine tetra 99.1 5.1E-10 1.1E-14 91.3 7.8 143 120-263 3-154 (155)
41 cd07394 MPP_Vps29 Homo sapiens 99.0 1.9E-08 4.1E-13 86.7 15.1 58 48-117 1-64 (178)
42 cd00838 MPP_superfamily metall 98.9 1.1E-08 2.3E-13 81.1 9.9 117 50-246 1-119 (131)
43 cd07392 MPP_PAE1087 Pyrobaculu 98.9 6.9E-08 1.5E-12 82.6 15.2 66 49-120 1-67 (188)
44 PRK05340 UDP-2,3-diacylglucosa 98.8 4.5E-08 9.7E-13 88.2 12.8 214 47-287 1-239 (241)
45 cd07404 MPP_MS158 Microscilla 98.8 8.2E-09 1.8E-13 87.4 6.8 67 49-118 1-68 (166)
46 COG2129 Predicted phosphoester 98.8 1.9E-07 4.1E-12 82.1 15.4 212 46-286 3-224 (226)
47 cd07399 MPP_YvnB Bacillus subt 98.8 1.2E-07 2.5E-12 84.0 13.7 193 48-288 2-213 (214)
48 cd07403 MPP_TTHA0053 Thermus t 98.7 7.9E-08 1.7E-12 78.4 10.0 107 50-246 1-107 (129)
49 TIGR01854 lipid_A_lpxH UDP-2,3 98.7 7E-08 1.5E-12 86.4 9.3 207 49-279 1-230 (231)
50 cd07400 MPP_YydB Bacillus subt 98.7 3.3E-07 7.1E-12 75.5 11.8 118 49-247 1-130 (144)
51 COG0622 Predicted phosphoester 98.5 4E-06 8.7E-11 71.7 14.7 160 47-290 2-167 (172)
52 TIGR03729 acc_ester putative p 98.5 3.1E-07 6.8E-12 82.5 7.6 68 48-118 1-74 (239)
53 PRK11340 phosphodiesterase Yae 98.5 7.5E-07 1.6E-11 81.7 10.1 70 47-118 50-125 (271)
54 cd07395 MPP_CSTP1 Homo sapiens 98.4 2E-05 4.3E-10 71.6 17.2 71 48-118 6-99 (262)
55 cd07402 MPP_GpdQ Enterobacter 98.4 3.6E-06 7.7E-11 75.1 11.4 67 48-118 1-83 (240)
56 PRK11148 cyclic 3',5'-adenosin 98.3 4.9E-05 1.1E-09 69.7 17.9 71 46-118 14-98 (275)
57 cd07396 MPP_Nbla03831 Homo sap 98.3 1.6E-05 3.4E-10 72.7 14.3 72 48-119 2-87 (267)
58 cd07385 MPP_YkuE_C Bacillus su 98.3 1.1E-06 2.4E-11 77.5 5.6 71 47-119 2-77 (223)
59 PRK04036 DNA polymerase II sma 98.2 1.3E-05 2.8E-10 79.8 12.7 72 46-119 243-344 (504)
60 cd07393 MPP_DR1119 Deinococcus 98.2 1.3E-05 2.8E-10 71.8 9.8 65 49-117 1-83 (232)
61 cd07383 MPP_Dcr2 Saccharomyces 98.2 2.3E-05 5.1E-10 68.2 11.2 70 47-116 3-87 (199)
62 COG2908 Uncharacterized protei 98.0 2.7E-05 5.9E-10 69.2 9.3 198 50-280 1-229 (237)
63 cd08165 MPP_MPPE1 human MPPE1 98.0 7.4E-05 1.6E-09 62.9 10.3 47 72-118 37-89 (156)
64 COG1409 Icc Predicted phosphoh 98.0 0.00029 6.4E-09 64.1 14.9 72 48-121 2-81 (301)
65 KOG0376 Serine-threonine phosp 97.9 3E-06 6.4E-11 81.7 1.2 242 19-264 14-299 (476)
66 TIGR00619 sbcd exonuclease Sbc 97.9 3.1E-05 6.8E-10 70.3 6.8 73 47-119 1-89 (253)
67 PF06874 FBPase_2: Firmicute f 97.9 0.00022 4.8E-09 71.2 13.1 42 74-120 185-226 (640)
68 cd07401 MPP_TMEM62_N Homo sapi 97.9 0.0002 4.4E-09 65.1 11.7 70 49-118 2-89 (256)
69 cd07391 MPP_PF1019 Pyrococcus 97.8 9.3E-05 2E-09 63.1 7.8 58 62-119 30-89 (172)
70 PHA02546 47 endonuclease subun 97.8 5.5E-05 1.2E-09 71.7 6.7 72 47-118 1-89 (340)
71 cd07398 MPP_YbbF-LpxH Escheric 97.7 0.00011 2.3E-09 64.5 7.1 69 50-119 1-83 (217)
72 cd00840 MPP_Mre11_N Mre11 nucl 97.7 8.3E-05 1.8E-09 65.2 6.2 73 48-120 1-91 (223)
73 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.7 0.00012 2.5E-09 66.9 7.2 71 49-119 1-87 (262)
74 PF14582 Metallophos_3: Metall 97.7 0.00048 1E-08 60.9 10.6 218 46-284 5-253 (255)
75 cd00839 MPP_PAPs purple acid p 97.7 0.00016 3.5E-09 66.5 8.1 70 47-120 5-83 (294)
76 cd07390 MPP_AQ1575 Aquifex aeo 97.7 9E-05 1.9E-09 63.0 5.9 67 49-120 1-84 (168)
77 cd07384 MPP_Cdc1_like Saccharo 97.5 0.001 2.2E-08 56.8 10.9 50 70-119 42-101 (171)
78 TIGR00024 SbcD_rel_arch putati 97.5 0.0003 6.4E-09 62.9 7.1 69 47-119 15-103 (225)
79 TIGR00583 mre11 DNA repair pro 97.3 0.00053 1.2E-08 66.4 7.0 54 47-100 4-69 (405)
80 cd07386 MPP_DNA_pol_II_small_a 97.2 0.00054 1.2E-08 61.7 5.2 68 50-119 2-95 (243)
81 PRK10966 exonuclease subunit S 97.2 0.00064 1.4E-08 66.0 5.8 72 47-119 1-88 (407)
82 COG1408 Predicted phosphohydro 97.0 0.0014 3.1E-08 60.5 5.9 71 47-119 45-119 (284)
83 cd08163 MPP_Cdc1 Saccharomyces 97.0 0.024 5.1E-07 51.7 13.7 33 216-250 202-234 (257)
84 COG4186 Predicted phosphoester 96.8 0.0029 6.3E-08 52.8 5.9 43 72-118 44-86 (186)
85 cd07380 MPP_CWF19_N Schizosacc 96.8 0.0032 6.9E-08 52.7 6.1 119 50-241 1-121 (150)
86 cd08166 MPP_Cdc1_like_1 unchar 96.7 0.0032 6.9E-08 54.9 5.8 48 71-118 40-93 (195)
87 PF08321 PPP5: PPP5 TPR repeat 96.7 0.0032 6.9E-08 48.5 4.9 43 3-45 53-95 (95)
88 KOG3325 Membrane coat complex 96.4 0.05 1.1E-06 45.1 10.4 127 49-263 3-135 (183)
89 cd00845 MPP_UshA_N_like Escher 96.4 0.0051 1.1E-07 55.3 4.9 66 48-118 2-82 (252)
90 COG0420 SbcD DNA repair exonuc 96.3 0.01 2.3E-07 57.1 7.1 74 47-120 1-90 (390)
91 cd00842 MPP_ASMase acid sphing 96.3 0.048 1E-06 50.3 11.0 71 49-120 40-124 (296)
92 cd07387 MPP_PolD2_C PolD2 (DNA 96.0 0.41 8.8E-06 43.7 15.1 50 232-286 205-257 (257)
93 COG1407 Predicted ICC-like pho 95.9 0.021 4.6E-07 51.1 6.4 72 45-119 18-111 (235)
94 PLN02533 probable purple acid 95.9 0.0094 2E-07 58.3 4.5 71 46-119 139-212 (427)
95 cd08164 MPP_Ted1 Saccharomyces 95.7 0.029 6.3E-07 48.9 6.2 64 54-117 24-110 (193)
96 cd07410 MPP_CpdB_N Escherichia 95.6 0.016 3.4E-07 53.1 4.4 65 48-117 2-94 (277)
97 cd07378 MPP_ACP5 Homo sapiens 95.0 0.049 1.1E-06 49.6 5.8 69 48-118 2-83 (277)
98 COG1311 HYS2 Archaeal DNA poly 94.8 0.43 9.4E-06 46.8 12.0 53 231-288 419-472 (481)
99 COG1768 Predicted phosphohydro 94.4 0.066 1.4E-06 45.9 4.7 75 71-157 41-117 (230)
100 cd07408 MPP_SA0022_N Staphyloc 94.3 0.065 1.4E-06 48.6 4.8 66 48-118 2-82 (257)
101 cd07412 MPP_YhcR_N Bacillus su 93.6 0.086 1.9E-06 48.7 4.2 66 48-118 2-88 (288)
102 cd07411 MPP_SoxB_N Thermus the 92.7 0.21 4.5E-06 45.5 5.2 64 49-118 3-95 (264)
103 KOG3662 Cell division control 92.1 0.3 6.5E-06 47.2 5.8 55 63-117 82-143 (410)
104 KOG2863 RNA lariat debranching 91.9 0.42 9.1E-06 45.2 6.2 73 47-119 1-89 (456)
105 KOG0918 Selenium-binding prote 91.8 0.011 2.3E-07 56.3 -4.3 196 72-279 46-251 (476)
106 cd07409 MPP_CD73_N CD73 ecto-5 91.4 0.43 9.4E-06 43.9 5.9 66 48-118 2-94 (281)
107 PRK09419 bifunctional 2',3'-cy 90.5 0.31 6.8E-06 53.6 4.6 65 48-117 662-735 (1163)
108 cd07406 MPP_CG11883_N Drosophi 89.6 0.62 1.3E-05 42.2 5.1 56 57-117 21-82 (257)
109 TIGR00282 metallophosphoestera 88.2 0.98 2.1E-05 41.4 5.4 67 47-118 1-71 (266)
110 PF04042 DNA_pol_E_B: DNA poly 86.4 1 2.2E-05 39.2 4.3 72 49-120 1-93 (209)
111 KOG2476 Uncharacterized conser 85.8 1.7 3.8E-05 42.4 5.8 69 46-115 5-75 (528)
112 COG3855 Fbp Uncharacterized pr 84.4 5.2 0.00011 39.3 8.2 41 74-119 191-231 (648)
113 cd07407 MPP_YHR202W_N Saccharo 84.3 1.1 2.5E-05 41.3 3.7 66 48-118 7-97 (282)
114 COG0737 UshA 5'-nucleotidase/2 83.7 1.3 2.8E-05 44.4 4.1 68 46-118 26-115 (517)
115 KOG3339 Predicted glycosyltran 83.1 13 0.00028 32.3 9.2 85 75-165 40-140 (211)
116 cd07382 MPP_DR1281 Deinococcus 82.1 3.1 6.8E-05 37.9 5.6 66 48-118 1-70 (255)
117 cd07405 MPP_UshA_N Escherichia 81.9 1.7 3.7E-05 40.0 3.9 65 49-118 3-87 (285)
118 PTZ00422 glideosome-associated 80.9 2.3 4.9E-05 41.2 4.5 71 47-117 27-108 (394)
119 cd08162 MPP_PhoA_N Synechococc 80.7 2.7 5.8E-05 39.4 4.8 64 49-117 3-90 (313)
120 PRK09420 cpdB bifunctional 2', 80.4 2.2 4.9E-05 44.0 4.5 68 45-117 24-121 (649)
121 TIGR01390 CycNucDiestase 2',3' 79.9 2.2 4.7E-05 44.0 4.2 66 47-117 3-98 (626)
122 PRK09419 bifunctional 2',3'-cy 79.7 2.1 4.6E-05 47.2 4.3 66 47-117 42-138 (1163)
123 COG3855 Fbp Uncharacterized pr 78.8 1.2 2.7E-05 43.5 1.9 57 219-275 515-580 (648)
124 PTZ00235 DNA polymerase epsilo 74.7 8.6 0.00019 35.7 6.1 72 47-118 28-122 (291)
125 PRK11907 bifunctional 2',3'-cy 72.2 5.2 0.00011 42.4 4.6 66 47-117 116-212 (814)
126 KOG1432 Predicted DNA repair e 70.6 6.8 0.00015 37.1 4.5 48 71-119 98-148 (379)
127 KOG2310 DNA repair exonuclease 69.1 12 0.00026 37.6 6.0 55 47-101 14-80 (646)
128 PRK09558 ushA bifunctional UDP 68.8 6 0.00013 40.0 4.1 68 46-118 34-121 (551)
129 KOG3947 Phosphoesterases [Gene 67.2 6.2 0.00013 36.3 3.4 65 47-119 62-127 (305)
130 KOG1378 Purple acid phosphatas 67.2 35 0.00076 33.6 8.7 33 221-253 323-355 (452)
131 TIGR01530 nadN NAD pyrophospha 65.5 8.9 0.00019 38.8 4.6 51 62-117 37-93 (550)
132 PRK09418 bifunctional 2',3'-cy 58.2 12 0.00027 39.5 4.2 67 46-117 39-141 (780)
133 PF12641 Flavodoxin_3: Flavodo 58.0 56 0.0012 27.4 7.5 59 50-111 2-73 (160)
134 PF02875 Mur_ligase_C: Mur lig 45.5 48 0.001 24.5 4.7 69 47-115 12-82 (91)
135 cd07381 MPP_CapA CapA and rela 44.5 36 0.00078 30.1 4.5 36 225-262 202-237 (239)
136 PF06874 FBPase_2: Firmicute f 44.5 19 0.0004 36.9 2.8 41 218-258 507-554 (640)
137 PF09587 PGA_cap: Bacterial ca 36.8 57 0.0012 29.1 4.5 36 225-262 211-246 (250)
138 PF10083 DUF2321: Uncharacteri 35.1 12 0.00025 31.4 -0.2 45 218-268 23-76 (158)
139 TIGR00282 metallophosphoestera 34.0 31 0.00067 31.6 2.3 39 76-118 2-41 (266)
140 KOG3425 Uncharacterized conser 33.2 1.6E+02 0.0035 23.7 5.9 60 59-118 12-79 (128)
141 smart00854 PGA_cap Bacterial c 32.8 68 0.0015 28.4 4.3 35 226-262 201-235 (239)
142 cd07382 MPP_DR1281 Deinococcus 29.3 48 0.001 30.2 2.7 40 76-118 1-40 (255)
143 PF06861 BALF1: BALF1 protein; 29.1 57 0.0012 27.8 2.9 82 21-120 54-135 (182)
144 COG4320 Uncharacterized protei 28.6 38 0.00082 32.0 2.0 61 33-102 43-108 (410)
145 PRK10773 murF UDP-N-acetylmura 27.1 2.3E+02 0.005 27.7 7.3 67 46-113 324-392 (453)
146 PF13258 DUF4049: Domain of un 26.7 3.9E+02 0.0084 24.3 7.8 86 75-168 86-185 (318)
147 PLN02965 Probable pheophorbida 26.4 2.1E+02 0.0044 25.1 6.4 21 220-240 59-81 (255)
148 PF12085 DUF3562: Protein of u 24.6 1.6E+02 0.0034 21.1 4.1 43 2-44 1-43 (66)
149 cd01533 4RHOD_Repeat_2 Member 24.3 3.1E+02 0.0067 20.6 6.6 88 16-113 8-100 (109)
150 PF14164 YqzH: YqzH-like prote 24.2 1.9E+02 0.0042 20.5 4.4 36 6-41 5-47 (64)
151 cd07398 MPP_YbbF-LpxH Escheric 22.7 77 0.0017 27.1 2.8 29 218-246 177-205 (217)
152 TIGR01143 murF UDP-N-acetylmur 22.7 3.5E+02 0.0075 26.0 7.6 69 46-115 295-365 (417)
153 PRK00485 fumC fumarate hydrata 22.5 4.7E+02 0.01 25.9 8.5 88 15-102 60-152 (464)
154 COG0634 Hpt Hypoxanthine-guani 22.4 5.1E+02 0.011 22.3 9.1 77 18-98 10-117 (178)
155 COG1692 Calcineurin-like phosp 21.2 1.4E+02 0.003 27.2 4.0 12 231-242 169-180 (266)
156 COG2204 AtoC Response regulato 20.4 2.6E+02 0.0057 27.8 6.1 95 1-99 82-185 (464)
157 TIGR00550 nadA quinolinate syn 20.3 1.8E+02 0.0039 27.2 4.8 36 46-84 28-63 (310)
158 TIGR01428 HAD_type_II 2-haloal 20.1 3.1E+02 0.0067 22.9 6.0 67 47-116 109-175 (198)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-88 Score=584.98 Aligned_cols=301 Identities=69% Similarity=1.262 Sum_probs=291.6
Q ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCceecCCCcceeecCCCCHHHHHHHHHhcCCCCCCeEEEeccccc
Q 021866 6 DLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVD 85 (306)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~viGDIHG~~~~l~~ll~~~g~~~~~~~vfLGD~vD 85 (306)
++++.|+.+.+.+.+++.++..||.++++||.+|+||.+++.|++|+|||||++.||..+|+..|.+++++|+|||||||
T Consensus 2 dldr~ie~L~~~~li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyVD 81 (303)
T KOG0372|consen 2 DLDRQIEQLRRCELIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYVD 81 (303)
T ss_pred cHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEeecchhc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCChHHHHHHhcCchhhHHHHhHhhccCceEEEeCcEEEecC
Q 021866 86 RGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHG 165 (306)
Q Consensus 86 rG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LPl~a~i~~~~l~vHg 165 (306)
||..|+|++.+|+.||.+||++|.+||||||.+.++..|||++||.+|||+..+|+.+.+.|+.||++|+|++++|||||
T Consensus 82 RG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kifCVHG 161 (303)
T KOG0372|consen 82 RGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFCVHG 161 (303)
T ss_pred cccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCccCCCCCeeeeChhhHhhhhhhcCCcEEEeecceeccce
Q 021866 166 GLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGY 245 (306)
Q Consensus 166 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~ 245 (306)
|+||++.++|||+.++|..++|.++.++|+|||||.+..+|..||||+|+.||++++++|++.||+++|+|+||.+.+||
T Consensus 162 GlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaHQLv~eGy 241 (303)
T KOG0372|consen 162 GLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEGPGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAHQLVMEGY 241 (303)
T ss_pred CCCcchhhHHHHHHhhccccCCCCCcchheeccCcccCCCcccCCCCccccccHHHHHHHHHhCChHHHHHHHHHHHhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeEEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEEeCCCCCCCCCCCCC-CCCCCC
Q 021866 246 NWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRK-TPDYFL 306 (306)
Q Consensus 246 ~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 306 (306)
++.++++++|||||||||++++|.||||.++++....|..|+++|...+..-+++ ..+||+
T Consensus 242 k~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~~~~~~~kk~~~~yFl 303 (303)
T KOG0372|consen 242 KWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQESRGIPAKKPIADYFL 303 (303)
T ss_pred HHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhhhcCCcccCcchhhcC
Confidence 9999999999999999999999999999999999999999999998877533333 447775
No 2
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=2e-79 Score=523.83 Aligned_cols=302 Identities=61% Similarity=1.135 Sum_probs=291.1
Q ss_pred chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCceecCCCcceeecCCCCHHHHHHHHHhcCCCCCCeEEEecccc
Q 021866 5 GDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYV 84 (306)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~viGDIHG~~~~l~~ll~~~g~~~~~~~vfLGD~v 84 (306)
-+.|++|+.+++++.++++|+..||+-++++|..|.|+..++.|+.|+|||||+|.||.++|+..|.-|++.|+|+||||
T Consensus 4 ~d~d~wi~~vk~ckyLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tnYiFmGDfV 83 (306)
T KOG0373|consen 4 MDLDQWIETVKKCKYLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTNYIFMGDFV 83 (306)
T ss_pred CCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcceEEecccc
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCChHHHHHHhcCchhhHHHHhHhhccCceEEEeCcEEEec
Q 021866 85 DRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLH 164 (306)
Q Consensus 85 DrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LPl~a~i~~~~l~vH 164 (306)
|||..|+|++.+|+.||.+||.++.+||||||.+.+...|||++||..+||+...|+.+.+.|+.|+++|+|+++++|||
T Consensus 84 DRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~vLCVH 163 (306)
T KOG0373|consen 84 DRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEKVLCVH 163 (306)
T ss_pred ccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCcEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCccCCCCCeeeeChhhHhhhhhhcCCcEEEeecceeccc
Q 021866 165 GGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEG 244 (306)
Q Consensus 165 gGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~~~G 244 (306)
||+||.+.++|||+.+.|..++|.++.++|++||||++.+.|.-||||+|+.||++++.+|...|++++|.|+||.+.+|
T Consensus 164 GGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPedve~W~vSpRGAGwlFGskVt~eF~~iN~L~LicRaHQLV~EG 243 (306)
T KOG0373|consen 164 GGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPEDVETWAVSPRGAGWLFGSKVTTEFNHINNLNLICRAHQLVQEG 243 (306)
T ss_pred CCCCccceeHHHHHhHHhhccCCCCCCccceeccChhhhhhheeCCCCcceeechhhhHHHHhccchHHHHhHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCe-EEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEEeCCCCCCCCCCCCCCCCCCC
Q 021866 245 YNWCQDKN-VVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPDYFL 306 (306)
Q Consensus 245 ~~~~~~~~-~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (306)
|++.+++| ++|||||||||++++|.|+||.++++++.+++.|.+.|..+|-.-.+...-||+
T Consensus 244 ~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~~~~~p~r~~~pYFl 306 (306)
T KOG0373|consen 244 FKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDNSRVIPPRTRAPYFL 306 (306)
T ss_pred HHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCccccCCCCCCCCCcC
Confidence 99999887 999999999999999999999999999999999999998866544444445664
No 3
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=2.1e-76 Score=545.29 Aligned_cols=301 Identities=57% Similarity=1.083 Sum_probs=283.2
Q ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCceecCCCcceeecCCCCHHHHHHHHHhcCCCCCCeEEEeccccc
Q 021866 6 DLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVD 85 (306)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~viGDIHG~~~~l~~ll~~~g~~~~~~~vfLGD~vD 85 (306)
+++++|+.+++.+.++++++.+||++|+++|++||++++++.|++|+|||||++.+|.++|+..+.++.++++|||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVD 81 (303)
T PTZ00239 2 DIDRHIATLLNGGCLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVD 81 (303)
T ss_pred CHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcC
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCChHHHHHHhcCchhhHHHHhHhhccCceEEEeCcEEEecC
Q 021866 86 RGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHG 165 (306)
Q Consensus 86 rG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LPl~a~i~~~~l~vHg 165 (306)
||++|+|++.+++++|..+|.++++||||||.+.++..|||..|+..+|+...+|+.+.++|++||++|+++++++||||
T Consensus 82 RG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~cvHg 161 (303)
T PTZ00239 82 RGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQILCVHG 161 (303)
T ss_pred CCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEEEEcC
Confidence 99999999999999999999999999999999999999999999999998778999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCccCCCCCeeeeChhhHhhhhhhcCCcEEEeecceeccce
Q 021866 166 GLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGY 245 (306)
Q Consensus 166 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~ 245 (306)
|++|...++++++.++|+.+.|.++.+.|+|||||.+..+|.+++||.|+.||++++++||++|++++||||||++++||
T Consensus 162 Gi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~ 241 (303)
T PTZ00239 162 GLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEEVEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQLVMEGY 241 (303)
T ss_pred ccCcccccHhhhccccCCCCCCCCCCceeeEecCccccCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhccce
Confidence 99999999999999999999999999999999999988899999999999999999999999999999999999999999
Q ss_pred EEecC-CeEEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEEeCCCCCCCCCCCCCCCCCCC
Q 021866 246 NWCQD-KNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPDYFL 306 (306)
Q Consensus 246 ~~~~~-~~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (306)
++.++ ++|+|||||||||+..+|+||+|.++++.+++|++|+|.+.+.........+.||+
T Consensus 242 ~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (303)
T PTZ00239 242 KYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPESAKSINPKNVLPYFL 303 (303)
T ss_pred EEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCcccccCcccCCCCCCC
Confidence 98765 45999999999999999999999999999999999999988643322222346664
No 4
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=3.7e-76 Score=540.60 Aligned_cols=284 Identities=76% Similarity=1.363 Sum_probs=276.7
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCceecCCCcceeecCCCCHHHHHHHHHhcCCCCCCeEEEecccccC
Q 021866 7 LDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDR 86 (306)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~viGDIHG~~~~l~~ll~~~g~~~~~~~vfLGD~vDr 86 (306)
++++++++.+...++++++.+||++|+++|++||++++++.|++|||||||++.+|.++|+..+.++.++||||||||||
T Consensus 2 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDR 81 (285)
T cd07415 2 LDKWIEQLKKCELLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDR 81 (285)
T ss_pred HHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCC
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCChHHHHHHhcCchhhHHHHhHhhccCceEEEeCcEEEecCC
Q 021866 87 GYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGG 166 (306)
Q Consensus 87 G~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LPl~a~i~~~~l~vHgG 166 (306)
|++|+|++.+++++|..+|.++++||||||.+.++..|||.+|+..+|+...+|..+.++|++||++|+++++++|||||
T Consensus 82 G~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~cvHgG 161 (285)
T cd07415 82 GYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIFCVHGG 161 (285)
T ss_pred CcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEEEEcCC
Confidence 99999999999999999999999999999999999999999999999987789999999999999999999999999999
Q ss_pred CCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCccCCCCCeeeeChhhHhhhhhhcCCcEEEeecceeccceE
Q 021866 167 LSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYN 246 (306)
Q Consensus 167 i~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~ 246 (306)
|+|...++++++.++|+.+.+.++.+.|++||||.+..+|.+++||.|+.||++++++||++||+++||||||++++||+
T Consensus 162 i~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~ 241 (285)
T cd07415 162 LSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDIEGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQLVMEGYQ 241 (285)
T ss_pred CCCCcccHHHhhcccCCCCCCCCCCccceEecCCCccCCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcCccccceEE
Confidence 99999999999999999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred EecCCeEEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEEeCCC
Q 021866 247 WCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAP 290 (306)
Q Consensus 247 ~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~ 290 (306)
+.++++|+||||||+||+..+|+||+|.|+++++++|++|+|.|
T Consensus 242 ~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 242 WMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred EecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 99999999999999999999999999999999999999999875
No 5
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=8.6e-76 Score=543.76 Aligned_cols=284 Identities=35% Similarity=0.640 Sum_probs=262.2
Q ss_pred CcchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCceecCC----CcceeecCCCCHHHHHHHHHhcCCCC-CCeE
Q 021866 3 SHGDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKC----PVTVCGDIHGQFYDLIELFRIGGNAP-DTNY 77 (306)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~----~i~viGDIHG~~~~l~~ll~~~g~~~-~~~~ 77 (306)
|...++++|+++.+.+.++++++.+||++|+++|++||++++++. |++|||||||++.+|.++|+..|+++ .++|
T Consensus 3 ~~~~~~~~i~~~~~~~~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~~~~~~ 82 (321)
T cd07420 3 TKDHIDALIEAFKEKQLLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPENPY 82 (321)
T ss_pred CHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCCccceE
Confidence 456799999999999999999999999999999999999999976 89999999999999999999999875 5689
Q ss_pred EEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCChHHHHHHhcC--chhhHHHHhHhhccCceEE
Q 021866 78 LFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGN--ANVWKYFTDLFDYLPLTAL 155 (306)
Q Consensus 78 vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~--~~~~~~~~~~f~~LPl~a~ 155 (306)
||||||||||++|+||+.+|++||+++|+++++||||||.+.++..|||.+||..+|+. ..+|..+.++|++||+||+
T Consensus 83 lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~LPlaai 162 (321)
T cd07420 83 VFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWLPLATI 162 (321)
T ss_pred EEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999973 6799999999999999999
Q ss_pred EeCcEEEecCCCCCCCCCHHHHHhhccccc-----CCC----------------------CCcccccccCCCCCCCC-Cc
Q 021866 156 IESQIFCLHGGLSPSLDTLDNIRALDRIQE-----VPH----------------------EGPMCDLLWSDPDDRCG-WG 207 (306)
Q Consensus 156 i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~-----~~~----------------------~~~~~dllWsdp~~~~~-~~ 207 (306)
+++++|||||||+| ..++++++.++|+.. .|. .+.+.|+|||||.+..+ |.
T Consensus 163 i~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~~~~~~~~ 241 (321)
T cd07420 163 IDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPKAQKGCKP 241 (321)
T ss_pred EcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCccCCCCCc
Confidence 99999999999997 468999999988531 111 03578999999986555 66
Q ss_pred cCCCCCeeeeChhhHhhhhhhcCCcEEEeecceeccceEEecCCeEEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEEe
Q 021866 208 ISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFD 287 (306)
Q Consensus 208 ~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~ 287 (306)
+++||.|+.||++++++||++|++++||||||++++||++.++++|+|||||||||+..+|+||+|.|+++++++|.+|.
T Consensus 242 ~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~~~~~~f~~~~ 321 (321)
T cd07420 242 NTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDLTPHFVQYQ 321 (321)
T ss_pred cCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEEEEEECCCCceeEEEeC
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999999999884
No 6
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=2.2e-74 Score=533.56 Aligned_cols=286 Identities=47% Similarity=0.934 Sum_probs=275.2
Q ss_pred hHHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCceecCCCcceeecCCCCHHHHHHHHHhcCCCCCCeE
Q 021866 6 DLDRQIEHLMECK--------PLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNY 77 (306)
Q Consensus 6 ~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~viGDIHG~~~~l~~ll~~~g~~~~~~~ 77 (306)
.++++|+.+.+.. .++++++.+||++|+++|++||+++++++|++|||||||++.+|.++|+..++++.++|
T Consensus 10 ~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~~y 89 (320)
T PTZ00480 10 DVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPESNY 89 (320)
T ss_pred CHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcceE
Confidence 4899999998654 58999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCChHHHHHHhcCchhhHHHHhHhhccCceEEEe
Q 021866 78 LFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIE 157 (306)
Q Consensus 78 vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LPl~a~i~ 157 (306)
||||||||||++|+|++.+++++|..+|+++++||||||.+.++..|||..|+..+| ...+|..+.++|++||++|+++
T Consensus 90 lfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y-~~~l~~~~~~~F~~LPlaAiI~ 168 (320)
T PTZ00480 90 LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-TIKLWKTFTDCFNCLPVAALID 168 (320)
T ss_pred EEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhc-CHHHHHHHHHHHHhccHhheec
Confidence 999999999999999999999999999999999999999999999999999999999 4679999999999999999999
Q ss_pred CcEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCC-CCCCccCCCCCeeeeChhhHhhhhhhcCCcEEEe
Q 021866 158 SQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDIASQFNHTNGLSLISR 236 (306)
Q Consensus 158 ~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~-~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iir 236 (306)
+++|||||||+|...++++++.++|+.+.+.++.+.|+|||||.. ..+|.+++||.|+.||++++++||++|++++|||
T Consensus 169 ~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiR 248 (320)
T PTZ00480 169 EKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICR 248 (320)
T ss_pred CcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEEE
Confidence 999999999999999999999999999999999999999999985 5789999999999999999999999999999999
Q ss_pred ecceeccceEEecCCeEEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEEeCCCCC
Q 021866 237 AHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 292 (306)
Q Consensus 237 gH~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~ 292 (306)
|||++++||++.++++|+||||||+||+..+|+||+|.|++++.++|.+|+|.+.+
T Consensus 249 ~Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 304 (320)
T PTZ00480 249 AHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQG 304 (320)
T ss_pred cCccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCccc
Confidence 99999999999999999999999999999999999999999999999999988766
No 7
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=1.7e-73 Score=527.87 Aligned_cols=286 Identities=44% Similarity=0.780 Sum_probs=272.0
Q ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCceecCCCcceeecCCCCHHHHHHHHHhcCCCCCCeEEEeccccc
Q 021866 6 DLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVD 85 (306)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~viGDIHG~~~~l~~ll~~~g~~~~~~~vfLGD~vD 85 (306)
.++-+++++.+++.++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..+.++.++|||||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVD 81 (305)
T cd07416 2 RIDVLKAHFMREGRLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVD 81 (305)
T ss_pred CHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccC
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCChHHHHHHhcCchhhHHHHhHhhccCceEEEeCcEEEecC
Q 021866 86 RGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHG 165 (306)
Q Consensus 86 rG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LPl~a~i~~~~l~vHg 165 (306)
||++|+||+.+++++|..+|+++++||||||.+.++..|||..|+..+| ...+|..+.++|++||++|+++++++||||
T Consensus 82 RG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y-~~~l~~~~~~~f~~LPlaaii~~~i~~vHG 160 (305)
T cd07416 82 RGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMEAFDCLPLAALMNQQFLCVHG 160 (305)
T ss_pred CCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhc-cHHHHHHHHHHHhhccceeEEcCCEEEEcC
Confidence 9999999999999999999999999999999999999999999999999 567999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCC-------CCCccC-CCCCeeeeChhhHhhhhhhcCCcEEEee
Q 021866 166 GLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDR-------CGWGIS-PRGAGYTFGQDIASQFNHTNGLSLISRA 237 (306)
Q Consensus 166 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~-------~~~~~~-~rg~g~~fg~~~~~~fl~~~~~~~iirg 237 (306)
|++|.+.++++++.++|+.+.+..+.++|+|||||... .+|.++ +||.|+.||++++++||++||+++||||
T Consensus 161 Gi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~ 240 (305)
T cd07416 161 GLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRA 240 (305)
T ss_pred CCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCeEEEEe
Confidence 99999999999999999999998999999999999742 247665 8999999999999999999999999999
Q ss_pred cceeccceEEecCC------eEEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEEeCCCCCC
Q 021866 238 HQLVMEGYNWCQDK------NVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQI 293 (306)
Q Consensus 238 H~~~~~G~~~~~~~------~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~ 293 (306)
||++++||++++++ +|+|||||||||+.++|+||+|.|+++ .++|.+|.+.||+.
T Consensus 241 He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~-~~~~~~~~~~~~~~ 301 (305)
T cd07416 241 HEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPHPY 301 (305)
T ss_pred ccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCC-cceEEEecCCCCCC
Confidence 99999999998876 899999999999999999999999987 57999999999984
No 8
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=7.4e-74 Score=531.62 Aligned_cols=290 Identities=39% Similarity=0.730 Sum_probs=274.8
Q ss_pred cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCceecCCC----cceeecCCCCHHHHHHHHHhcCCCCC-CeEE
Q 021866 4 HGDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCP----VTVCGDIHGQFYDLIELFRIGGNAPD-TNYL 78 (306)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~----i~viGDIHG~~~~l~~ll~~~g~~~~-~~~v 78 (306)
.+.+++++++++++..++++++.+||++|+++|++||++++++.| ++||||||||+.+|.++|+..++++. ++||
T Consensus 13 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~yl 92 (316)
T cd07417 13 LEFVKEMIEWFKDQKKLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPSETNPYL 92 (316)
T ss_pred HHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCCCCccCeEE
Confidence 346899999999999999999999999999999999999999866 99999999999999999999998754 5799
Q ss_pred EecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCChHHHHHHhcCchhhHHHHhHhhccCceEEEeC
Q 021866 79 FMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIES 158 (306)
Q Consensus 79 fLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LPl~a~i~~ 158 (306)
|||||||||++|+||+.+++++|..+|+++++||||||.+.++..|||..|+..+| ...+|..+.++|++||+++++++
T Consensus 93 FLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~-~~~l~~~~~~~f~~LPlaaii~~ 171 (316)
T cd07417 93 FNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKY-NEQMFDLFSEVFNWLPLAHLING 171 (316)
T ss_pred EEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcc-cHHHHHHHHHHHHhchHhheeCC
Confidence 99999999999999999999999999999999999999999999999999999999 46799999999999999999999
Q ss_pred cEEEecCCC-CCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCccCCCCCeeeeChhhHhhhhhhcCCcEEEee
Q 021866 159 QIFCLHGGL-SPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRA 237 (306)
Q Consensus 159 ~~l~vHgGi-~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iirg 237 (306)
+++|||||+ +|...+++++++++|+.+.+.++.+.|+|||||.+..+|.+++||.|+.||++++++||++||+++||||
T Consensus 172 ~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~s~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 251 (316)
T cd07417 172 KVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQPGRSPSKRGVGCQFGPDVTKRFLEENNLEYIIRS 251 (316)
T ss_pred eEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCCCCCCccCCCCceEeCHHHHHHHHHHcCCcEEEEC
Confidence 999999999 5567889999999999988889999999999999888999999999999999999999999999999999
Q ss_pred cceeccceEEecCCeEEEEEcCCCCcccCCCcEEEEEEcC-CCceEEEEEeCCCCCCC
Q 021866 238 HQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGE-NMEQNFLQFDPAPRQIE 294 (306)
Q Consensus 238 H~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~-~~~~~~~~~~~~~~~~~ 294 (306)
||++++||++.++++|+|||||||||+.++|+||+|.|++ +++++|++|.|.|++.-
T Consensus 252 He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~~~~ 309 (316)
T cd07417 252 HEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPHPNV 309 (316)
T ss_pred CcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCCCCC
Confidence 9999999999999999999999999999999999999999 89999999999988743
No 9
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=3.4e-74 Score=534.06 Aligned_cols=284 Identities=48% Similarity=0.943 Sum_probs=271.7
Q ss_pred hHHHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHhhCCCceecCCCcceeecCCCCHHHHHHHHHhcC-CCCC
Q 021866 6 DLDRQIEHLMEC----------KPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGG-NAPD 74 (306)
Q Consensus 6 ~~~~~~~~~~~~----------~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~viGDIHG~~~~l~~ll~~~g-~~~~ 74 (306)
.++++|..+.+. ..++++++.+||.++.+++.++|+++++++||.|+|||||++.||+++|...| +|++
T Consensus 8 ~~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~pp~ 87 (331)
T KOG0374|consen 8 DLDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSFPPD 87 (331)
T ss_pred hHHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCCCCc
Confidence 355666655432 24899999999999999999999999999999999999999999999999999 9999
Q ss_pred CeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCChHHHHHHhcCchhhHHHHhHhhccCceE
Q 021866 75 TNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTA 154 (306)
Q Consensus 75 ~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LPl~a 154 (306)
.+|||||||||||++|+|++.+|+++|++||+++++||||||++.++..|||++||.++|+...+|+.+++.|++||++|
T Consensus 88 ~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp~~a 167 (331)
T KOG0374|consen 88 QNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLPLAA 167 (331)
T ss_pred ccEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCchhh
Confidence 99999999999999999999999999999999999999999999999999999999999966789999999999999999
Q ss_pred EEeCcEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCC-CCCCccCCCCCeeeeChhhHhhhhhhcCCcE
Q 021866 155 LIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDIASQFNHTNGLSL 233 (306)
Q Consensus 155 ~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~-~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~ 233 (306)
+|+++++|+|||++|.+.++++++.+.||.+.+..++++|++||||.. ..+|.+|.||.++.||++++++||+++++++
T Consensus 168 ~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ldl 247 (331)
T KOG0374|consen 168 LIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLDLDL 247 (331)
T ss_pred eecceEEEecCCCChhhcChHHHhhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhCcce
Confidence 999999999999999999999999999999999999999999999985 5899999999999999999999999999999
Q ss_pred EEeecceeccceEEecCCeEEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEEeCC
Q 021866 234 ISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPA 289 (306)
Q Consensus 234 iirgH~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 289 (306)
||||||++++||+++.+++++||||||+||+.+.|.||+|.+++++.++|.++.|.
T Consensus 248 ivRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~ 303 (331)
T KOG0374|consen 248 IVRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPE 303 (331)
T ss_pred EEEcCccccccceEecCceEEEEecCchhccccCCceEEEEECCCCeEEEEEeccc
Confidence 99999999999999999999999999999999999999999999999999999995
No 10
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=1.8e-73 Score=524.78 Aligned_cols=282 Identities=48% Similarity=0.979 Sum_probs=270.3
Q ss_pred HHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCceecCCCcceeecCCCCHHHHHHHHHhcCCCCCCeEE
Q 021866 7 LDRQIEHLMECK--------PLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYL 78 (306)
Q Consensus 7 ~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~viGDIHG~~~~l~~ll~~~g~~~~~~~v 78 (306)
++++|+.+.+.. .++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..++++.+++|
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 677888887654 689999999999999999999999999999999999999999999999999999999999
Q ss_pred EecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCChHHHHHHhcCchhhHHHHhHhhccCceEEEeC
Q 021866 79 FMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIES 158 (306)
Q Consensus 79 fLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LPl~a~i~~ 158 (306)
|||||||||++|+|++.+++++|..+|+++++||||||.+.++..|||..|+..+| ...+|..+.++|++||++|++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y-~~~l~~~~~~~f~~lPlaa~i~~ 160 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPVAAIIDE 160 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhh-hHHHHHHHHHHHHHhHHHHhhCC
Confidence 99999999999999999999999999999999999999999999999999999999 46799999999999999999999
Q ss_pred cEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCC-CCCCccCCCCCeeeeChhhHhhhhhhcCCcEEEee
Q 021866 159 QIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRA 237 (306)
Q Consensus 159 ~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~-~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iirg 237 (306)
+++|||||++|...++++++.++|+.+.+..+.+.|++||||.. ..+|.+++||.|+.||++++++||++||+++||||
T Consensus 161 ~i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 240 (293)
T cd07414 161 KIFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRA 240 (293)
T ss_pred cEEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEEC
Confidence 99999999999999999999999999999999999999999984 67899999999999999999999999999999999
Q ss_pred cceeccceEEecCCeEEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEEeCC
Q 021866 238 HQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPA 289 (306)
Q Consensus 238 H~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 289 (306)
||++++||++.++++|+||||||+||+..+|+||+|.|+++++++|++|+|.
T Consensus 241 He~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 241 HQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred CccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 9999999999999999999999999999999999999999999999999864
No 11
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=3e-73 Score=522.68 Aligned_cols=281 Identities=41% Similarity=0.821 Sum_probs=268.2
Q ss_pred HHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhCCCceecCCCcceeecCCCCHHHHHHHHHhcCCCCCCeEE
Q 021866 7 LDRQIEHLMECK--------PLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYL 78 (306)
Q Consensus 7 ~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~viGDIHG~~~~l~~ll~~~g~~~~~~~v 78 (306)
++++|+++.+.. .++++++.+||++++++|++||+++++++|++|||||||++.+|.++|+..++++.++++
T Consensus 4 ~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~l 83 (294)
T PTZ00244 4 VQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNYL 83 (294)
T ss_pred HHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcccEE
Confidence 567777776543 589999999999999999999999999999999999999999999999999999999999
Q ss_pred EecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCChHHHHHHhcCchhhHHHHhHhhccCceEEEeC
Q 021866 79 FMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIES 158 (306)
Q Consensus 79 fLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LPl~a~i~~ 158 (306)
|||||||||++|+|++.+++++|..+|.++++||||||.+.++..|||.+|+..+|+ ..+|..+.++|++||++|++++
T Consensus 84 fLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaaii~~ 162 (294)
T PTZ00244 84 FLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYN-IKLFKAFTDVFNTMPVCCVISE 162 (294)
T ss_pred EeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhh-HHHHHHHHHHHHhCchheEecC
Confidence 999999999999999999999999999999999999999999999999999999994 6799999999999999999999
Q ss_pred cEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCC-CCCCccCCCCCeeeeChhhHhhhhhhcCCcEEEee
Q 021866 159 QIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRA 237 (306)
Q Consensus 159 ~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~-~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iirg 237 (306)
+++|||||++|.+.++++++.++|+.+.+.++++.|++||||.. ..+|.+++||.|+.||++++++||++||+++||||
T Consensus 163 ~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~ 242 (294)
T PTZ00244 163 KIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVRA 242 (294)
T ss_pred eeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEEc
Confidence 99999999999999999999999999999999999999999985 57999999999999999999999999999999999
Q ss_pred cceeccceEEecCCeEEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEEeC
Q 021866 238 HQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDP 288 (306)
Q Consensus 238 H~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~ 288 (306)
||++++||+++++++|+||||||+||+..+|+||+|.|+++.+++|.+|.+
T Consensus 243 Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 243 HQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred CccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 999999999999999999999999999999999999999999999998875
No 12
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-73 Score=493.97 Aligned_cols=301 Identities=83% Similarity=1.409 Sum_probs=295.9
Q ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCceecCCCcceeecCCCCHHHHHHHHHhcCCCCCCeEEEeccccc
Q 021866 6 DLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVD 85 (306)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~viGDIHG~~~~l~~ll~~~g~~~~~~~vfLGD~vD 85 (306)
.++.+|+++.+.+++++.++..+|+.|+++|.+|.++..+..|++|+||+||||++|.++++..|..++..|+|+|||||
T Consensus 19 ~vd~~ie~L~~ck~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnylfmGDyvd 98 (319)
T KOG0371|consen 19 DVDPWIEQLYKCKPLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYLFMGDYVD 98 (319)
T ss_pred ccccchHHHHhcCCCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCcceeeeeeecc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCChHHHHHHhcCchhhHHHHhHhhccCceEEEeCcEEEecC
Q 021866 86 RGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHG 165 (306)
Q Consensus 86 rG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LPl~a~i~~~~l~vHg 165 (306)
||+.|.|++.++.++|++||++|.+||||||.+.+...|||++||.++||+..+|..|.+.|+.+|+.|.|+++++|.||
T Consensus 99 rGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~~ifc~HG 178 (319)
T KOG0371|consen 99 RGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESKIFCLHG 178 (319)
T ss_pred cccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhccceeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCccCCCCCeeeeChhhHhhhhhhcCCcEEEeecceeccce
Q 021866 166 GLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGY 245 (306)
Q Consensus 166 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~ 245 (306)
|++|++.+++.++.++|..++|.++.++|+|||||+++.+|..+|||.|+.||++..++|-.+||+++|-|+||.+.+||
T Consensus 179 gLspsi~tld~~r~~dr~~evphegpmcDlLwsdpddr~gwg~sprgag~tfg~di~~~fn~~n~lslisRahqlvm~g~ 258 (319)
T KOG0371|consen 179 GLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRAHQLVMEGY 258 (319)
T ss_pred CcCcccchHHHHHHHHHhhcccCCCChhheeccCcccCCCCCCCCCCCCcccchhhHHHhhccCCchHhHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCeEEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEEeCCCCCCCCCCCCCCCCCCC
Q 021866 246 NWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPDYFL 306 (306)
Q Consensus 246 ~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (306)
.+.+...++|+|||||||++++|.+|++.++++....|.||+|+|.+-.+.+++..||||+
T Consensus 259 nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~k~e~~vtr~tpDYfL 319 (319)
T KOG0371|consen 259 NWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPRKVEPDVTRKTPDYFL 319 (319)
T ss_pred ceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCccccccccccCCCCCcC
Confidence 9999999999999999999999999999999999999999999998888899999999996
No 13
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=3.4e-71 Score=505.56 Aligned_cols=269 Identities=53% Similarity=0.975 Sum_probs=259.7
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCceecCCCcceeecCCCCHHHHHHHHHhcCCCCCCeEEEecccccCCCCcHHHHHHHHH
Q 021866 20 LPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVA 99 (306)
Q Consensus 20 ~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~viGDIHG~~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~evl~ll~~ 99 (306)
++++++.+||++|+++|++||+++++++|++|||||||++.+|.++|+..+.++.+++||||||||||++|+|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCeEEEeCCCchhhhhhhhcCChHHHHHHhcCchhhHHHHhHhhccCceEEEeCcEEEecCCCCCCCCCHHHHHh
Q 021866 100 LKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRA 179 (306)
Q Consensus 100 lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LPl~a~i~~~~l~vHgGi~p~~~~~~~i~~ 179 (306)
+|..+|.++++||||||.+.++..|||.+|+..+|+ ..+|+.+.++|++||++|+++++++|||||++|...++++++.
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~-~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~ 159 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYG-EEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRK 159 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcC-HHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhc
Confidence 999999999999999999999999999999999995 6899999999999999999999999999999999999999999
Q ss_pred hcccccCCCCCcccccccCCCC-CCCCCccCCCCCeeeeChhhHhhhhhhcCCcEEEeecceeccceEEecCCeEEEEEc
Q 021866 180 LDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFS 258 (306)
Q Consensus 180 i~r~~~~~~~~~~~dllWsdp~-~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itvfS 258 (306)
++|+.+.+.++.+.|++||||. ...+|.+|+||.|+.||++++++||++||+++||||||++++||++.++++|+||||
T Consensus 160 i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfS 239 (271)
T smart00156 160 LKRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFS 239 (271)
T ss_pred ccCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEEC
Confidence 9999988889999999999996 578999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCCCcEEEEEEcCCCceEEEEEeCC
Q 021866 259 APNYCYRCGNMAAILEIGENMEQNFLQFDPA 289 (306)
Q Consensus 259 a~~y~~~~~n~~avl~i~~~~~~~~~~~~~~ 289 (306)
|||||+..+|+||++.|+++++++|.+|+|.
T Consensus 240 a~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 240 APNYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred CcccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 9999998899999999999999999999864
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=2.5e-69 Score=507.65 Aligned_cols=292 Identities=36% Similarity=0.586 Sum_probs=263.0
Q ss_pred CcchHHHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHhhCCCceecC----CCcceeecCCCCHHHHHHHHHh
Q 021866 3 SHGDLDRQIEHLMEC----------KPLPEAEVKTLCDQARAILVEEWNVQPVK----CPVTVCGDIHGQFYDLIELFRI 68 (306)
Q Consensus 3 ~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~~~il~~ep~~l~~~----~~i~viGDIHG~~~~l~~ll~~ 68 (306)
|.+.++.||+.++.. ..++.+++.+||++|+++|++||++++++ .|++|||||||++.+|.++|+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~ 87 (377)
T cd07418 8 TNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLED 87 (377)
T ss_pred CHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHH
Confidence 345689999999755 34789999999999999999999999998 8999999999999999999999
Q ss_pred cCCCCC-CeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCChHHHHHHhcC--chhhHHHHh
Q 021866 69 GGNAPD-TNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGN--ANVWKYFTD 145 (306)
Q Consensus 69 ~g~~~~-~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~--~~~~~~~~~ 145 (306)
.++++. .+|||||||||||++|+||+.+++++|..+|+++++||||||.+.++..|||..|+..+|+. ..+|+.+.+
T Consensus 88 ~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~ 167 (377)
T cd07418 88 AGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLG 167 (377)
T ss_pred hCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHH
Confidence 998765 56999999999999999999999999999999999999999999999999999999999975 379999999
Q ss_pred HhhccCceEEEeCcEEEecCCCC---------------------------CCCCCHHHHHhhcccc-cCCCCC---cccc
Q 021866 146 LFDYLPLTALIESQIFCLHGGLS---------------------------PSLDTLDNIRALDRIQ-EVPHEG---PMCD 194 (306)
Q Consensus 146 ~f~~LPl~a~i~~~~l~vHgGi~---------------------------p~~~~~~~i~~i~r~~-~~~~~~---~~~d 194 (306)
+|++||++|+++++++||||||+ |.+.++++|+.++|+. +.+.++ +++|
T Consensus 168 ~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~d 247 (377)
T cd07418 168 CFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGD 247 (377)
T ss_pred HHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCcccccee
Confidence 99999999999999999999994 4456899999999974 555544 4689
Q ss_pred cccCCCCCCCCCccC-CCCCeeeeChhhHhhhhhhcCCcEEEeecce------------eccceEEecC---CeEEEEEc
Q 021866 195 LLWSDPDDRCGWGIS-PRGAGYTFGQDIASQFNHTNGLSLISRAHQL------------VMEGYNWCQD---KNVVTVFS 258 (306)
Q Consensus 195 llWsdp~~~~~~~~~-~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~------------~~~G~~~~~~---~~~itvfS 258 (306)
+|||||....+|.++ +||.|+.||++++++||++|++++||||||+ +++||++.++ ++|+||||
T Consensus 248 lLWSDP~~~~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~liTvFS 327 (377)
T cd07418 248 VLWSDPSLTPGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLITLFS 327 (377)
T ss_pred eEeeCCccCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcEEEEec
Confidence 999999987888776 7999999999999999999999999999996 6799999887 99999999
Q ss_pred CCCCc------ccCCCcEEEEEEcCC--CceEEEEEeCC-CCCCC
Q 021866 259 APNYC------YRCGNMAAILEIGEN--MEQNFLQFDPA-PRQIE 294 (306)
Q Consensus 259 a~~y~------~~~~n~~avl~i~~~--~~~~~~~~~~~-~~~~~ 294 (306)
||||| +.++|+||++.++.+ .+.+|.+|+++ |++..
T Consensus 328 a~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (377)
T cd07418 328 APDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAVKPRPKA 372 (377)
T ss_pred CCccccccccccccCcceEEEEEecCCCCCccceEeeccCCCCCC
Confidence 99999 578999999999664 47999999998 76643
No 15
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=2.5e-68 Score=495.25 Aligned_cols=271 Identities=41% Similarity=0.756 Sum_probs=253.7
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCceecCCCcceeecCCCCHHHHHHHHHhcCCCCC--------CeEEEecccccCCCC
Q 021866 18 KPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPD--------TNYLFMGDYVDRGYY 89 (306)
Q Consensus 18 ~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~viGDIHG~~~~l~~ll~~~g~~~~--------~~~vfLGD~vDrG~~ 89 (306)
..++++++.+||++|.++|++||+++++++|++||||||||+++|.++|+..+.++. .++||||||||||++
T Consensus 19 ~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~ 98 (311)
T cd07419 19 FFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSN 98 (311)
T ss_pred cCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCC
Confidence 468999999999999999999999999999999999999999999999999988754 579999999999999
Q ss_pred cHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCChHHHHHHhcC-----chhhHHHHhHhhccCceEEEeCcEEEec
Q 021866 90 SVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGN-----ANVWKYFTDLFDYLPLTALIESQIFCLH 164 (306)
Q Consensus 90 s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~-----~~~~~~~~~~f~~LPl~a~i~~~~l~vH 164 (306)
|+||+.+++++|..+|.++++||||||.+.++..|||..++..+|+. ..+|..+.++|++||++++++++++|||
T Consensus 99 s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l~vH 178 (311)
T cd07419 99 SLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCMH 178 (311)
T ss_pred hHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEEEEc
Confidence 99999999999999999999999999999999999999999999864 3689999999999999999999999999
Q ss_pred CCCCCCCCCHHHHHhhcccc-cCCCCCcccccccCCCCCC---CCCccCC---CCCe--eeeChhhHhhhhhhcCCcEEE
Q 021866 165 GGLSPSLDTLDNIRALDRIQ-EVPHEGPMCDLLWSDPDDR---CGWGISP---RGAG--YTFGQDIASQFNHTNGLSLIS 235 (306)
Q Consensus 165 gGi~p~~~~~~~i~~i~r~~-~~~~~~~~~dllWsdp~~~---~~~~~~~---rg~g--~~fg~~~~~~fl~~~~~~~ii 235 (306)
||++|...++++++.+.|+. ..+.+..+.|++||||.+. .+|.+++ ||.| +.||++++++||++||+++||
T Consensus 179 gGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl~~n~l~~ii 258 (311)
T cd07419 179 GGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFLEENDLQMII 258 (311)
T ss_pred cCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeECHHHHHHHHHHCCCeEEE
Confidence 99999999999999999997 4456678899999999853 4677666 9998 799999999999999999999
Q ss_pred eecceeccceEEecCCeEEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEEeC
Q 021866 236 RAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDP 288 (306)
Q Consensus 236 rgH~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~ 288 (306)
||||++++||++.++++|+||||||+||+.++|+||++.|+++.++++++++|
T Consensus 259 RgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 259 RAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred EechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 99999999999999999999999999999999999999999999999999986
No 16
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=7.4e-69 Score=486.22 Aligned_cols=288 Identities=43% Similarity=0.764 Sum_probs=271.6
Q ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCceecCCCcceeecCCCCHHHHHHHHHhcCCCCCCeEEEeccccc
Q 021866 6 DLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVD 85 (306)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~viGDIHG~~~~l~~ll~~~g~~~~~~~vfLGD~vD 85 (306)
..+-+-+++.+.+.++++..+.|+.++.++|++|++++++++||.|+|||||||.||.++|+..|.|..++|+|||||||
T Consensus 47 ~~~~Lr~Hf~~EGrl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVD 126 (517)
T KOG0375|consen 47 RHDVLRNHFIKEGRLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVD 126 (517)
T ss_pred chHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeeccccc
Confidence 56778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCChHHHHHHhcCchhhHHHHhHhhccCceEEEeCcEEEecC
Q 021866 86 RGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHG 165 (306)
Q Consensus 86 rG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LPl~a~i~~~~l~vHg 165 (306)
||.+|+||+.+|++||+.||...++||||||++.+...+.|..||..+| +.++|+.+.+.|+.||+||+.++.++||||
T Consensus 127 RGyFSiECvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKY-se~vYdaCmesFd~LPLAAlmNqQflCVHG 205 (517)
T KOG0375|consen 127 RGYFSIECVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMESFDCLPLAALMNQQFLCVHG 205 (517)
T ss_pred cceeeeehHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhc-cHHHHHHHHHHhccchHHHHhcCceEEecC
Confidence 9999999999999999999999999999999999999999999999999 788999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCC-------CCCCc-cCCCCCeeeeChhhHhhhhhhcCCcEEEee
Q 021866 166 GLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDD-------RCGWG-ISPRGAGYTFGQDIASQFNHTNGLSLISRA 237 (306)
Q Consensus 166 Gi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~-------~~~~~-~~~rg~g~~fg~~~~~~fl~~~~~~~iirg 237 (306)
|+||.+.++++|+.++|+.+.|.-+++||+|||||.+ .+.|. .+.||++|.|.-.++.+||++||+-.|||+
T Consensus 206 GlSPEi~tl~DIr~l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRA 285 (517)
T KOG0375|consen 206 GLSPEIHTLDDIRKLDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRA 285 (517)
T ss_pred CCCcccccHHHHHhhhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhh
Confidence 9999999999999999999999999999999999963 22344 357999999999999999999999999999
Q ss_pred cceeccceEEecCC------eEEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEEeCCCCCCCC
Q 021866 238 HQLVMEGYNWCQDK------NVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEP 295 (306)
Q Consensus 238 H~~~~~G~~~~~~~------~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~~~~ 295 (306)
|+.++.||+...+. .+|||||||||.+.++|+||||+...+ .+.++||.++||+.-.
T Consensus 286 HEAQDaGYRMYrksqttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnN-VMNIRQFncSPHPYWL 348 (517)
T KOG0375|consen 286 HEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSPHPYWL 348 (517)
T ss_pred hhhhhhhhhhhhcccccCCchheeeecCCchhhhhccHHHHhhhhcc-cceeeccCCCCCCccc
Confidence 99999999876654 489999999999999999999998765 8899999999999543
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=1e-57 Score=422.31 Aligned_cols=287 Identities=32% Similarity=0.617 Sum_probs=259.2
Q ss_pred chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCceecC----CCcceeecCCCCHHHHHHHHHhcCCCCC-CeEEE
Q 021866 5 GDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVK----CPVTVCGDIHGQFYDLIELFRIGGNAPD-TNYLF 79 (306)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~----~~i~viGDIHG~~~~l~~ll~~~g~~~~-~~~vf 79 (306)
.+++.+|+.++..+.+++..++.|+.+|+++|++.|++-+++ ..++|+||+||.++||.-+|-+.|.|+. ..|||
T Consensus 119 ~~i~~lieaFk~kq~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS~~npYvF 198 (631)
T KOG0377|consen 119 NHIDLLIEAFKKKQRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPSSSNPYVF 198 (631)
T ss_pred hHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCCCCCCeee
Confidence 468999999999999999999999999999999999998874 5799999999999999999999999875 45999
Q ss_pred ecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCChHHHHHHhc--CchhhHHHHhHhhccCceEEEe
Q 021866 80 MGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYG--NANVWKYFTDLFDYLPLTALIE 157 (306)
Q Consensus 80 LGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~--~~~~~~~~~~~f~~LPl~a~i~ 157 (306)
.||+||||.+|+|+|..|+++...||..+++-|||||..++|-.|||.+|...+|. ...+...+.++|++||++.+++
T Consensus 199 NGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WLPi~tiid 278 (631)
T KOG0377|consen 199 NGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWLPIGTIID 278 (631)
T ss_pred cCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhcchhhhcc
Confidence 99999999999999999999999999999999999999999999999999999996 3578889999999999999999
Q ss_pred CcEEEecCCCCCCCCCHHHHHhhccccc-----CCC---------C--------CcccccccCCCCCCCCCccC-CCCCe
Q 021866 158 SQIFCLHGGLSPSLDTLDNIRALDRIQE-----VPH---------E--------GPMCDLLWSDPDDRCGWGIS-PRGAG 214 (306)
Q Consensus 158 ~~~l~vHgGi~p~~~~~~~i~~i~r~~~-----~~~---------~--------~~~~dllWsdp~~~~~~~~~-~rg~g 214 (306)
.++|+||||+|.. +.++-+.++.|... .|- + ..+.|++||||....|+.+| -||.|
T Consensus 279 ~~ilvvHGGiSd~-Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RGgG 357 (631)
T KOG0377|consen 279 SRILVVHGGISDS-TDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRGGG 357 (631)
T ss_pred cceEEEecCcccc-hhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccccCCc
Confidence 9999999999854 45666666665421 111 0 12568999999988887776 69999
Q ss_pred eeeChhhHhhhhhhcCCcEEEeecceeccceEEecCCeEEEEEcCCCCcccCCCcEEEEEEcCCCceEEEEEeCCCCC
Q 021866 215 YTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 292 (306)
Q Consensus 215 ~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~~~~~~~~~~~~~~~ 292 (306)
++||++++++||++++++++||+|++.++||++.++++|+|||||+||.....|+||.+++.......|+||.+....
T Consensus 358 ~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQY~a~k~t 435 (631)
T KOG0377|consen 358 CYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQYQAAKQT 435 (631)
T ss_pred ceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeCCCCCchHHHHHhhhhh
Confidence 999999999999999999999999999999999999999999999999988899999999999999999999976543
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=1e-51 Score=389.77 Aligned_cols=290 Identities=38% Similarity=0.735 Sum_probs=270.3
Q ss_pred CcchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCceecCC----CcceeecCCCCHHHHHHHHHhcCCCC-CCeE
Q 021866 3 SHGDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPVKC----PVTVCGDIHGQFYDLIELFRIGGNAP-DTNY 77 (306)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~----~i~viGDIHG~~~~l~~ll~~~g~~~-~~~~ 77 (306)
|.+.+..+++.+.....++..-+-+|+..+..+++++|++++++. .+.++||+||++.++.++++..|.|+ ...+
T Consensus 166 t~e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~y 245 (476)
T KOG0376|consen 166 TLEFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPY 245 (476)
T ss_pred hHHHHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccc
Confidence 345677777777788889999999999999999999999998864 59999999999999999999999877 4569
Q ss_pred EEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCChHHHHHHhcCchhhHHHHhHhhccCceEEEe
Q 021866 78 LFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIE 157 (306)
Q Consensus 78 vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LPl~a~i~ 157 (306)
+|.||+||||..|.|+...++..|..+|++++++|||||...++..|||..++..+| ....+..+.+.|.+||++..++
T Consensus 246 lfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~ky-te~~~~~f~~~f~~LPl~~~i~ 324 (476)
T KOG0376|consen 246 LFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKY-TEEMFNLFSEVFIWLPLAHLIN 324 (476)
T ss_pred cccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhh-HHHHHHhhhhhhccccchhhhc
Confidence 999999999999999999999999999999999999999999999999999999999 4556666679999999999999
Q ss_pred CcEEEecCCCC-CCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCccCCCCCeeeeChhhHhhhhhhcCCcEEEe
Q 021866 158 SQIFCLHGGLS-PSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISR 236 (306)
Q Consensus 158 ~~~l~vHgGi~-p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iir 236 (306)
++++.+|||+. |.-..+++++.|.|+...+.++..++++||||....|..+|.||.|..||++++.+||+.++++.|||
T Consensus 325 ~~~~~~hgglf~~~~v~l~d~r~i~r~~~~~~~~~~~~~lws~pq~~~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~r 404 (476)
T KOG0376|consen 325 NKVLVMHGGLFSPDGVTLEDFRNIDRFEQPPEEGLMCELLWSDPQPANGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIR 404 (476)
T ss_pred CceEEEecCcCCCCCccHHHHHhhhhccCCcccccccccccCCCccccCCCccccCceeeeCCCchhhHHhhcchHHHhh
Confidence 99999999984 55578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecceeccceEEecCCeEEEEEcCCCCcccCCCcEEEEEEc-CCCceEEEEEeCCCCCC
Q 021866 237 AHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIG-ENMEQNFLQFDPAPRQI 293 (306)
Q Consensus 237 gH~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~-~~~~~~~~~~~~~~~~~ 293 (306)
||+..+.||+..++|+|+|||||||||+.++|.||++.++ ++++..+.+|+|.|++.
T Consensus 405 she~~d~gy~~eh~g~l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~~ 462 (476)
T KOG0376|consen 405 SHEVKDEGYEVEHSGKLITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHPD 462 (476)
T ss_pred ccccCCCceeeecCCcEEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCCC
Confidence 9999999999999999999999999999999999999998 67899999999999984
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=1e-36 Score=270.66 Aligned_cols=214 Identities=48% Similarity=0.780 Sum_probs=176.9
Q ss_pred ceeecCCCCHHHHHHHHHhcCCCCCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCChHH
Q 021866 50 TVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDE 129 (306)
Q Consensus 50 ~viGDIHG~~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e 129 (306)
+|||||||++++|.++++..+..+.+++||||||||||+.+.+++.++++++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999988999999999999999999999999999877 8899999999999998776665543
Q ss_pred H--------HHHhcCchhhHHHHhHhhccCceEEEeC-cEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCC
Q 021866 130 C--------LRKYGNANVWKYFTDLFDYLPLTALIES-QIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDP 200 (306)
Q Consensus 130 ~--------~~~~~~~~~~~~~~~~f~~LPl~a~i~~-~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp 200 (306)
. ...+....++..+.+++..||+++.++. +++|||||++|.....++.. ..+......+++|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 2233345678889999999999988876 99999999999876555543 2334455789999998
Q ss_pred CCCCCC-ccCCCCCeeeeChhhHhhhhhhcCCcEEEeecceeccceEEecCCeEEEEEcCCCCcccCCCcEEEEE
Q 021866 201 DDRCGW-GISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILE 274 (306)
Q Consensus 201 ~~~~~~-~~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~~avl~ 274 (306)
.....+ ..++++. |+++...|++.++.+.||||||++..|+.....+++++|+|++.|++..+|.++++.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 743332 2333433 899999999999999999999999999876678899999999999877777777654
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.96 E-value=3.6e-28 Score=219.44 Aligned_cols=192 Identities=20% Similarity=0.310 Sum_probs=134.4
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCC---------CCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchh
Q 021866 47 CPVTVCGDIHGQFYDLIELFRIGGNA---------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 117 (306)
Q Consensus 47 ~~i~viGDIHG~~~~l~~ll~~~g~~---------~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~ 117 (306)
++++||||||||++.|.++|+++++. +.+++|||||||||||+|.+|+.+++++. .+.++++||||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 46899999999999999999998873 46789999999999999999999999884 35589999999999
Q ss_pred hhhhhhcC-------ChHHHHHHhcC------chhhHHHHhHhhccCceEEEe-CcEEEecCCCCCCCC--CHHHHHhhc
Q 021866 118 RQITQVYG-------FYDECLRKYGN------ANVWKYFTDLFDYLPLTALIE-SQIFCLHGGLSPSLD--TLDNIRALD 181 (306)
Q Consensus 118 ~~~~~~~g-------f~~e~~~~~~~------~~~~~~~~~~f~~LPl~a~i~-~~~l~vHgGi~p~~~--~~~~i~~i~ 181 (306)
++++...+ ...++...|.. ..+.+.+.+|++++|++..+. ++++|||||++|... ..+++
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~~~~~~~~~---- 154 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDYIGRQDKKV---- 154 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHhcccchhhh----
Confidence 98865432 12344445531 236678899999999987664 679999999987631 11111
Q ss_pred ccccCCCCCcccccccCCCC--------C-CCCCccCCCCCeeeeChhhHhhhhhhcCCcEEEeecceeccceEEecCCe
Q 021866 182 RIQEVPHEGPMCDLLWSDPD--------D-RCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKN 252 (306)
Q Consensus 182 r~~~~~~~~~~~dllWsdp~--------~-~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~ 252 (306)
...++|++-. . ...|..+. .+.+.+|.||+++..... .++
T Consensus 155 ----------~~~~l~~~~~~~~~~~~~~~~~~~~~~~------------------~g~~~vV~GHtp~~~~~~---~~~ 203 (245)
T PRK13625 155 ----------QTFVLYGDITGEKHPDGSPVRRDWAKEY------------------KGTAWIVYGHTPVKEPRF---VNH 203 (245)
T ss_pred ----------hhHHhhccccCCcCCCCCeeeeccchhc------------------CCCcEEEECCCCCcccee---cCC
Confidence 2234454311 0 11221111 144568999999865432 245
Q ss_pred EEEEEcCCCCcccCCCcEEEEEEcCCC
Q 021866 253 VVTVFSAPNYCYRCGNMAAILEIGENM 279 (306)
Q Consensus 253 ~itvfSa~~y~~~~~n~~avl~i~~~~ 279 (306)
.+-|.+..-| +++-+.+.+.+..
T Consensus 204 ~i~IDtGa~~----gG~Ltal~l~~~~ 226 (245)
T PRK13625 204 TVNIDTGCVF----GGRLTALRYPEME 226 (245)
T ss_pred eEEEECcCcc----CCEEEEEECCCCc
Confidence 6778887544 5677778887653
No 21
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.95 E-value=6.5e-28 Score=212.67 Aligned_cols=178 Identities=19% Similarity=0.288 Sum_probs=131.3
Q ss_pred ceeecCCCCHHHHHHHHHhcCC--------CCCCeEEEecccccCCCCcHHHHHHHHHhhhh---cCCeEEEeCCCchhh
Q 021866 50 TVCGDIHGQFYDLIELFRIGGN--------APDTNYLFMGDYVDRGYYSVETVTLLVALKVR---YRDRITILRGNHESR 118 (306)
Q Consensus 50 ~viGDIHG~~~~l~~ll~~~g~--------~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~---~p~~v~lLrGNHE~~ 118 (306)
+|||||||++++|.++|+.++. .+.+.+||+||+||||+++.+|++++++++.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999999875 35789999999999999999999999999754 456899999999999
Q ss_pred hhhhhcCChH-HHHHHhc-----Cc---hhhHHHHhHhhccCceEEEeCcEEEecCCCCCCCCCHHHHHhhcccccCCCC
Q 021866 119 QITQVYGFYD-ECLRKYG-----NA---NVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHE 189 (306)
Q Consensus 119 ~~~~~~gf~~-e~~~~~~-----~~---~~~~~~~~~f~~LPl~a~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~ 189 (306)
.++..+.+.. ....... .. .....+.+|++.+|+...+ ++++|||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~-~~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKV-NDTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEE-CCEEEEeCCcHH--------------------
Confidence 9875443321 1111110 01 1224568999999999765 579999999843
Q ss_pred CcccccccCCCCCCCCCccCCCCCeeeeChhhHhhhhhhcCCcEEEeecceeccceEEecCCeEEEEEcCCC
Q 021866 190 GPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPN 261 (306)
Q Consensus 190 ~~~~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itvfSa~~ 261 (306)
+|++. .+.+.. ...-+...+.++++.++.++||+|||+++.|....+++++++|.++..
T Consensus 140 ------~w~r~----y~~~~~---~~~~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g~~ 198 (208)
T cd07425 140 ------LWYRG----YSKETS---DKECAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVGMS 198 (208)
T ss_pred ------HHhhH----hhhhhh---hccchHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCCcc
Confidence 33311 000000 000122467888999999999999999998876688999999998643
No 22
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.94 E-value=4.2e-26 Score=204.67 Aligned_cols=200 Identities=21% Similarity=0.350 Sum_probs=131.7
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCCC----------CCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCch
Q 021866 47 CPVTVCGDIHGQFYDLIELFRIGGNAP----------DTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHE 116 (306)
Q Consensus 47 ~~i~viGDIHG~~~~l~~ll~~~g~~~----------~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE 116 (306)
+|+.||||||||+.+|.++|+++++.+ .+++||||||||||++|.+|+++|++++. +.++++|+||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCcH
Confidence 479999999999999999999997753 46899999999999999999999999865 346999999999
Q ss_pred hhhhhhhcCC-------hHHHHHHhc--CchhhHHHHhHhhccCceEEEe-CcEEEecCCCCCCCCCHHHHHhhcccccC
Q 021866 117 SRQITQVYGF-------YDECLRKYG--NANVWKYFTDLFDYLPLTALIE-SQIFCLHGGLSPSLDTLDNIRALDRIQEV 186 (306)
Q Consensus 117 ~~~~~~~~gf-------~~e~~~~~~--~~~~~~~~~~~f~~LPl~a~i~-~~~l~vHgGi~p~~~~~~~i~~i~r~~~~ 186 (306)
.+.++...+- ..++...+. ...+.+.+.+||+.||+...++ ++++|||||+++.......
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~~~~~~---------- 148 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEMIGRDS---------- 148 (234)
T ss_pred HHHHHHhcCCCccccCcccchHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHhccccc----------
Confidence 9987653221 123334442 2456678899999999987664 4799999998764321110
Q ss_pred CCCCcccccccCCCCC-CCCCccCCCCCeeeeChhhHhhhh-hhcCCcEEEeecceeccceEEecCCeEEEEEcCCCCcc
Q 021866 187 PHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDIASQFN-HTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCY 264 (306)
Q Consensus 187 ~~~~~~~dllWsdp~~-~~~~~~~~rg~g~~fg~~~~~~fl-~~~~~~~iirgH~~~~~G~~~~~~~~~itvfSa~~y~~ 264 (306)
.......+|.+... ........| ..|. ...+.+.+|.||++++.... .+..+-|-+..-|
T Consensus 149 --~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~vv~GHt~~~~~~~---~~~~i~IDtGav~-- 210 (234)
T cd07423 149 --KRVRSFALYGDTTGETDEFGLPVR-----------RDWAKEYRGDALVVYGHTPVPEPRW---LNNTINIDTGCVF-- 210 (234)
T ss_pred --hhheeeeecccccCCcCCCCCccc-----------hhhHhhCCCCeEEEECCCCCccceE---eCCEEEEECCCCC--
Confidence 00112234443210 000000000 0011 12356679999999875432 2235667776655
Q ss_pred cCCCcEEEEEEcCC
Q 021866 265 RCGNMAAILEIGEN 278 (306)
Q Consensus 265 ~~~n~~avl~i~~~ 278 (306)
+++-+.+.+++.
T Consensus 211 --gG~Lt~l~~~~~ 222 (234)
T cd07423 211 --GGKLTALRYPER 222 (234)
T ss_pred --CCcceEEECCCC
Confidence 456667777664
No 23
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.94 E-value=3.4e-26 Score=203.71 Aligned_cols=116 Identities=24% Similarity=0.349 Sum_probs=93.1
Q ss_pred ceeecCCCCHHHHHHHHHhcCCC--------CCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhh
Q 021866 50 TVCGDIHGQFYDLIELFRIGGNA--------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQIT 121 (306)
Q Consensus 50 ~viGDIHG~~~~l~~ll~~~g~~--------~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~ 121 (306)
+||||||||++.|.++|+++++. +.+++|||||||||||+|.+|++++++++. +.++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~--~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVD--AGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhc--CCCEEEEEccCcHHHHH
Confidence 69999999999999999998764 567899999999999999999999999864 44799999999999875
Q ss_pred hhcCC------h-----------HHHHHHhc-CchhhHHHHhHhhccCceEEEeCcEEEecCCCC
Q 021866 122 QVYGF------Y-----------DECLRKYG-NANVWKYFTDLFDYLPLTALIESQIFCLHGGLS 168 (306)
Q Consensus 122 ~~~gf------~-----------~e~~~~~~-~~~~~~~~~~~f~~LPl~a~i~~~~l~vHgGi~ 168 (306)
...+. . .+....++ .....+...+||++||+.. ..++++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~-~~~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFL-DLGGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEE-EECCEEEEECCcC
Confidence 32210 0 12333442 2345678899999999986 4578999999985
No 24
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.94 E-value=6.9e-26 Score=207.17 Aligned_cols=219 Identities=19% Similarity=0.283 Sum_probs=144.9
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCC-CCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcC
Q 021866 47 CPVTVCGDIHGQFYDLIELFRIGGNA-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (306)
Q Consensus 47 ~~i~viGDIHG~~~~l~~ll~~~g~~-~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~g 125 (306)
++++||||||||++.|.++++++++. ..+.++|+||+|||||+|.+|+.++.++ +.++++|+||||.+.+...+|
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcC
Confidence 46899999999999999999999874 5688999999999999999999999987 447999999999998877666
Q ss_pred ChH----HHHHHhcCchhhHHHHhHhhccCceEEE-eCcEEEecCCCCCCCCCHHHHHhhcccccCCCC----Ccccccc
Q 021866 126 FYD----ECLRKYGNANVWKYFTDLFDYLPLTALI-ESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHE----GPMCDLL 196 (306)
Q Consensus 126 f~~----e~~~~~~~~~~~~~~~~~f~~LPl~a~i-~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~----~~~~dll 196 (306)
... +...++......+.+.+|++.+|+...+ .+++++||||++|.+...+.+...++....... ..+..+.
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~~~~~~~~a~eve~~l~~~~~~~~~~~my 156 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWDLATALALAREVEAVLRSDDYRDFLANMY 156 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCCHHHHHHHHHHHHHHhcCCcHHHHHHHhc
Confidence 431 2333332334556788999999998654 568999999999988544333222222111111 1233444
Q ss_pred cCCCCCCCCCccCCCCCe-eeeChhh---------------------------Hhhhhh----hcCCcEEEeecceeccc
Q 021866 197 WSDPDDRCGWGISPRGAG-YTFGQDI---------------------------ASQFNH----TNGLSLISRAHQLVMEG 244 (306)
Q Consensus 197 Wsdp~~~~~~~~~~rg~g-~~fg~~~---------------------------~~~fl~----~~~~~~iirgH~~~~~G 244 (306)
|+.|. .|.++-.|.. ..|--.+ ..-+.+ ...-..||-||.....|
T Consensus 157 ~~~p~---~W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l~G 233 (275)
T PRK00166 157 GNEPD---RWSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAALEG 233 (275)
T ss_pred CCCcC---ccCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCcccCC
Confidence 44442 2322222111 0000000 000000 01234799999999778
Q ss_pred eEEecCCeEEEEEcCCCCcccCCCcEEEEEEcCC
Q 021866 245 YNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGEN 278 (306)
Q Consensus 245 ~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~ 278 (306)
... ...++.+.|.--+ +++-+.+.+++.
T Consensus 234 ~~~--~~~~~~LDtGcvw----gg~Lta~~l~~~ 261 (275)
T PRK00166 234 LTT--PPNIIALDTGCVW----GGKLTALRLEDK 261 (275)
T ss_pred ccC--CCCeEEeeccccc----CCeEEEEEeCCC
Confidence 865 5668999887433 678888999753
No 25
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.93 E-value=2.6e-25 Score=202.39 Aligned_cols=189 Identities=20% Similarity=0.246 Sum_probs=131.9
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCC------CCCCeEEEecccccCCCCcHHHHHHHHHhhhhcCC-eEEEeCCCchhhh
Q 021866 47 CPVTVCGDIHGQFYDLIELFRIGGN------APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRD-RITILRGNHESRQ 119 (306)
Q Consensus 47 ~~i~viGDIHG~~~~l~~ll~~~g~------~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~-~v~lLrGNHE~~~ 119 (306)
.++++||||||+++.|.++++.+.. ...+.+|||||||||||+|.+|+++|++++..+|. ++++|+||||.++
T Consensus 2 ~~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~ 81 (304)
T cd07421 2 RVVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAF 81 (304)
T ss_pred ceEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHH
Confidence 3689999999999999999986532 23457999999999999999999999999988876 6889999999887
Q ss_pred hhhhcC-----------------------------------------C----------------------hHHHHHHhcC
Q 021866 120 ITQVYG-----------------------------------------F----------------------YDECLRKYGN 136 (306)
Q Consensus 120 ~~~~~g-----------------------------------------f----------------------~~e~~~~~~~ 136 (306)
+..... + ..+++.+||-
T Consensus 82 l~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv 161 (304)
T cd07421 82 AAFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGV 161 (304)
T ss_pred HhHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCC
Confidence 643211 0 1245666652
Q ss_pred c--------hhhHHHHhHhhccCceEEEeCcE-------------EEecCCCCCCCCCHHHHHhhc-ccccCCCCCcccc
Q 021866 137 A--------NVWKYFTDLFDYLPLTALIESQI-------------FCLHGGLSPSLDTLDNIRALD-RIQEVPHEGPMCD 194 (306)
Q Consensus 137 ~--------~~~~~~~~~f~~LPl~a~i~~~~-------------l~vHgGi~p~~~~~~~i~~i~-r~~~~~~~~~~~d 194 (306)
. .+.+...+|++.||.... .+++ +|||||+.|..+.-+|...+. +....| -.+
T Consensus 162 ~~~~~~l~~avP~~H~~fl~~l~~~~~-~~~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p----~~~ 236 (304)
T cd07421 162 PHGSSDLIKAVPEEHKKFLRNLVWVHE-EDDVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIP----KIA 236 (304)
T ss_pred CcchHHHHHhCCHHHHHHHHhCCceEE-eCcccccccccccccceEEEEcccCCCCChHHhhhhhhccccccc----ccc
Confidence 2 345678899999999864 4456 999999999998777876644 222333 238
Q ss_pred cccCCCCCCCCCccCCCCCeeeeChhhHhhhhhhcCCcEEEeecceeccceEEecCCeEEEEEcCCCCc
Q 021866 195 LLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYC 263 (306)
Q Consensus 195 llWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itvfSa~~y~ 263 (306)
++|.+ ..|...++... ..-.+||.||+.. ....+.=|.|.+...|.
T Consensus 237 ~l~~R----~~f~~~~~~~~--------------~~~~~VVhGHt~~-----~~~~~~Ri~iDtGa~~~ 282 (304)
T cd07421 237 PLSGR----KNVWNIPQELA--------------DKKTIVVSGHHGK-----LHIDGLRLIIDEGGGFD 282 (304)
T ss_pred ccccc----hhhhcCccccc--------------CCCeEEEECCCCC-----ceecCCEEEEECCCCcC
Confidence 89985 33333333220 0114599999922 33334445567776663
No 26
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.93 E-value=4.4e-25 Score=196.05 Aligned_cols=178 Identities=18% Similarity=0.203 Sum_probs=118.1
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCC-CCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcC
Q 021866 47 CPVTVCGDIHGQFYDLIELFRIGGNA-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (306)
Q Consensus 47 ~~i~viGDIHG~~~~l~~ll~~~g~~-~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~g 125 (306)
.+++||||||||++.|.++|+.+++. ..++++||||+|||||+|.+|++++.+. ++++|+||||.+.++...+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~------~~~~v~GNHE~~~l~~~~~ 90 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEH------WVRAVRGNHEQMALDALAS 90 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcC------CceEeeCchHHHHHHHHHC
Confidence 48999999999999999999999876 5788999999999999999999998653 5789999999999865322
Q ss_pred ChH--------HHHHHhc--CchhhHHHHhHhhccCceEEE---eCcEEEecCCCCCCCCCHHHHHhhcccccCCCCCcc
Q 021866 126 FYD--------ECLRKYG--NANVWKYFTDLFDYLPLTALI---ESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPM 192 (306)
Q Consensus 126 f~~--------e~~~~~~--~~~~~~~~~~~f~~LPl~a~i---~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~ 192 (306)
-.. +....+. ....+..+.+|+++||+...+ ++++++||||++.... +.. .+ ...
T Consensus 91 ~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p~~~~--~~~----~~------~~~ 158 (218)
T PRK11439 91 QQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYPADVY--EWQ----KD------VDL 158 (218)
T ss_pred CccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCCCCch--hhh----cc------CCc
Confidence 110 0011111 112445667899999998644 3579999999843211 111 00 013
Q ss_pred cccccCCCCCCCCCccCCCCCeeeeChhhHhhhhhhcCCcEEEeecceeccceEEecCCeEEEEEcCCCC
Q 021866 193 CDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNY 262 (306)
Q Consensus 193 ~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itvfSa~~y 262 (306)
.+++|+++.....+ . +. ...+.+.+|.|||+++.-.. .+..+-|.+.+-|
T Consensus 159 ~~~~w~r~~~~~~~---~-~~-------------~~~~~~~vv~GHT~~~~~~~---~~~~i~IDtGav~ 208 (218)
T PRK11439 159 HQVLWSRSRLGERQ---K-GQ-------------GITGADHFWFGHTPLRHRVD---IGNLHYIDTGAVF 208 (218)
T ss_pred cceEEcChhhhhcc---c-cc-------------cccCCCEEEECCccCCCccc---cCCEEEEECCCCC
Confidence 46789853211110 0 00 11255679999999865432 2346667776544
No 27
>PHA02239 putative protein phosphatase
Probab=99.93 E-value=4.7e-25 Score=197.59 Aligned_cols=175 Identities=23% Similarity=0.343 Sum_probs=125.1
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCC--CCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhc
Q 021866 47 CPVTVCGDIHGQFYDLIELFRIGGNA--PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVY 124 (306)
Q Consensus 47 ~~i~viGDIHG~~~~l~~ll~~~g~~--~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~ 124 (306)
+++++||||||+++.|.++++.+... +.+.+||+|||||||++|.+++..++.+.. .+.++++|+||||.++++...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHh
Confidence 36899999999999999999987532 468899999999999999999999998754 345799999999998765321
Q ss_pred C--------------ChHHHHHHhcCc------------------------------hhhHHHHhHhhccCceEEEeCcE
Q 021866 125 G--------------FYDECLRKYGNA------------------------------NVWKYFTDLFDYLPLTALIESQI 160 (306)
Q Consensus 125 g--------------f~~e~~~~~~~~------------------------------~~~~~~~~~f~~LPl~a~i~~~~ 160 (306)
+ ...+++.+|+.. ..+..+..|++.||+.. ..+++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~-~~~~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYY-KEDKY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceE-EECCE
Confidence 0 113455666411 12345567999999995 56789
Q ss_pred EEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCccCCCCCeeeeChhhHhhhhhhcCCcEEEeecce
Q 021866 161 FCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQL 240 (306)
Q Consensus 161 l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~ 240 (306)
+|||||+.|..+..+|. ..+++|.+. | +++ ..-+.||.|||+
T Consensus 159 ifVHAGi~p~~~~~~q~--------------~~~llWiR~-----f--~~~-----------------~~g~~vV~GHTp 200 (235)
T PHA02239 159 IFSHSGGVSWKPVEEQT--------------IDQLIWSRD-----F--QPR-----------------KDGFTYVCGHTP 200 (235)
T ss_pred EEEeCCCCCCCChhhCC--------------HhHeEEecc-----c--CCC-----------------CCCcEEEECCCC
Confidence 99999999876533332 568999962 3 111 112358999999
Q ss_pred eccceEEecCCeEEEEEcCCCC
Q 021866 241 VMEGYNWCQDKNVVTVFSAPNY 262 (306)
Q Consensus 241 ~~~G~~~~~~~~~itvfSa~~y 262 (306)
+..+..... ++.|.|.+..-|
T Consensus 201 ~~~~~~~~~-~~~I~IDtGa~~ 221 (235)
T PHA02239 201 TDSGEVEIN-GDMLMCDVGAVF 221 (235)
T ss_pred CCCCccccc-CCEEEeecCccc
Confidence 876543332 446777776544
No 28
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.93 E-value=3e-25 Score=200.96 Aligned_cols=122 Identities=25% Similarity=0.337 Sum_probs=101.0
Q ss_pred cceeecCCCCHHHHHHHHHhcCCC-CCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCCh
Q 021866 49 VTVCGDIHGQFYDLIELFRIGGNA-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFY 127 (306)
Q Consensus 49 i~viGDIHG~~~~l~~ll~~~g~~-~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~ 127 (306)
++||||||||+++|+++|+++++. +.++++|+||+|||||+|+||++++++++ .++++++||||.+.++..+++.
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 589999999999999999999875 57899999999999999999999999985 4799999999999988766643
Q ss_pred H----HHHHHhcCchhhHHHHhHhhccCceEEEeC-cEEEecCCCCCCCCCH
Q 021866 128 D----ECLRKYGNANVWKYFTDLFDYLPLTALIES-QIFCLHGGLSPSLDTL 174 (306)
Q Consensus 128 ~----e~~~~~~~~~~~~~~~~~f~~LPl~a~i~~-~~l~vHgGi~p~~~~~ 174 (306)
. +...++......+.+.+|++++|+...+++ ++++||||++|.++..
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~~~ 128 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWSIE 128 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCCHH
Confidence 1 223333233445778999999999976654 7999999999998543
No 29
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.92 E-value=3.8e-25 Score=200.97 Aligned_cols=123 Identities=23% Similarity=0.331 Sum_probs=102.0
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCC-CCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcC
Q 021866 47 CPVTVCGDIHGQFYDLIELFRIGGNA-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (306)
Q Consensus 47 ~~i~viGDIHG~~~~l~~ll~~~g~~-~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~g 125 (306)
++++||||||||+++|.++|+++++. ..++++|+||+|||||+|++|+.++.++ ++++++|+||||.+.++..+|
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l----~~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSL----GDAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhc----CCCeEEEEChhHHHHHHHhcC
Confidence 36899999999999999999999875 5788999999999999999999999988 346889999999999988777
Q ss_pred Ch----HHHHHHhcCchhhHHHHhHhhccCceEEEe-CcEEEecCCCCCCCCC
Q 021866 126 FY----DECLRKYGNANVWKYFTDLFDYLPLTALIE-SQIFCLHGGLSPSLDT 173 (306)
Q Consensus 126 f~----~e~~~~~~~~~~~~~~~~~f~~LPl~a~i~-~~~l~vHgGi~p~~~~ 173 (306)
+. .+....+-.....+.+.+|++.+|+..... .++++||||++|.++.
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~l 129 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWDL 129 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCcH
Confidence 52 123333334456788999999999986543 3699999999999853
No 30
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.91 E-value=3.1e-23 Score=182.65 Aligned_cols=181 Identities=20% Similarity=0.284 Sum_probs=120.9
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCC-CCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcC
Q 021866 47 CPVTVCGDIHGQFYDLIELFRIGGNA-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (306)
Q Consensus 47 ~~i~viGDIHG~~~~l~~ll~~~g~~-~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~g 125 (306)
+|+++||||||++.+|.++++..+.. ..+.++|+||+||||+++.+++.++.. .++++++||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 47899999999999999999998864 468899999999999999999998865 26899999999998876544
Q ss_pred --ChHHHHHHhcC--------chhhHHHHhHhhccCceEEEe---CcEEEecCCCCCCCCCHHHHHhhcccccCCCCCcc
Q 021866 126 --FYDECLRKYGN--------ANVWKYFTDLFDYLPLTALIE---SQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPM 192 (306)
Q Consensus 126 --f~~e~~~~~~~--------~~~~~~~~~~f~~LPl~a~i~---~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~ 192 (306)
...+.+.+.+. ..+++...+|+++||+...+. .++++||||+++... ..... + +.......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~---~--~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVG---A--VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhh---c--cccCcccc
Confidence 22223333321 124556888999999987664 369999999865431 11110 0 11122335
Q ss_pred cccccCCCCCCCCCccCCCCCeeeeChhhHhhhhhhcCCcEEEeecceeccceEEecCCeEEEEEcCC
Q 021866 193 CDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAP 260 (306)
Q Consensus 193 ~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itvfSa~ 260 (306)
.+++|++|...... +...-+.+.||.|||+.+..+.. ++ .+-|...+
T Consensus 149 ~~~~w~~~~~~~~~------------------~~~~~~~~~iV~GHTh~~~~~~~--~~-~i~ID~Gs 195 (207)
T cd07424 149 EELLWSRTRIQKAQ------------------TQPIKGVDAVVHGHTPVKRPLRL--GN-VLYIDTGA 195 (207)
T ss_pred eeeeeccchhhhcC------------------ccccCCCCEEEECCCCCCcceEE--CC-EEEEECCC
Confidence 67889865311110 00011456799999998764432 33 33344443
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.88 E-value=7.7e-22 Score=175.23 Aligned_cols=116 Identities=21% Similarity=0.221 Sum_probs=86.1
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCC-CCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcC
Q 021866 47 CPVTVCGDIHGQFYDLIELFRIGGNA-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (306)
Q Consensus 47 ~~i~viGDIHG~~~~l~~ll~~~g~~-~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~g 125 (306)
.|++||||||||+++|.++++.+.+. ..++++|+||+|||||+|.+|+.++.+ .+++.+|||||.+.+.....
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~ 88 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFET 88 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhc
Confidence 48999999999999999999998754 568899999999999999999998854 26889999999998864321
Q ss_pred ChH--------HHHHHhcC--chhhHHHHhHhhccCceEEEe---CcEEEecCCCC
Q 021866 126 FYD--------ECLRKYGN--ANVWKYFTDLFDYLPLTALIE---SQIFCLHGGLS 168 (306)
Q Consensus 126 f~~--------e~~~~~~~--~~~~~~~~~~f~~LPl~a~i~---~~~l~vHgGi~ 168 (306)
-.. +...+... .........|+++||+...+. .++++||||++
T Consensus 89 ~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 89 GDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred CChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 000 11111111 112234466999999886553 46899999984
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.46 E-value=5e-13 Score=109.74 Aligned_cols=159 Identities=19% Similarity=0.188 Sum_probs=101.4
Q ss_pred CcceeecCCCCHHHH----HHHHHhcCCCCCCeEEEecccccCCCCcHHHHHHH--HHhhhhcCCeEEEeCCCchhhhhh
Q 021866 48 PVTVCGDIHGQFYDL----IELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLL--VALKVRYRDRITILRGNHESRQIT 121 (306)
Q Consensus 48 ~i~viGDIHG~~~~l----~~ll~~~g~~~~~~~vfLGD~vDrG~~s~evl~ll--~~lk~~~p~~v~lLrGNHE~~~~~ 121 (306)
||+++||+|+..... ..+.+.....+.+.+|++||++|+|..+.+..... .......+..+++++||||.....
T Consensus 2 ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~~ 81 (200)
T PF00149_consen 2 RILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSGN 81 (200)
T ss_dssp EEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHHH
T ss_pred eEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhccccccccccccccceec
Confidence 689999999999987 44444445566788999999999999887766654 344445566899999999998765
Q ss_pred hhcCChHHHHHH---------------------------------hcCchhhHHHHhHhhccCceEEEeCcEEEecCCCC
Q 021866 122 QVYGFYDECLRK---------------------------------YGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLS 168 (306)
Q Consensus 122 ~~~gf~~e~~~~---------------------------------~~~~~~~~~~~~~f~~LPl~a~i~~~~l~vHgGi~ 168 (306)
..+......... ............+.............++++|.++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~~ 161 (200)
T PF00149_consen 82 SFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPPY 161 (200)
T ss_dssp HHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSSS
T ss_pred cccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCCC
Confidence 433221111100 00001111222233333333334567999999887
Q ss_pred CCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCccCCCCCeeeeChhhHhhhhhhcCCcEEEeeccee
Q 021866 169 PSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLV 241 (306)
Q Consensus 169 p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~ 241 (306)
+......+. .....+.+.+..++++.++++++.||++.
T Consensus 162 ~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 162 SSSSDSSSY-----------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp TTSSSTHHH-----------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred Ccccccccc-----------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 554321111 12345678889999999999999999975
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.37 E-value=1.6e-11 Score=102.71 Aligned_cols=59 Identities=22% Similarity=0.351 Sum_probs=48.6
Q ss_pred CcceeecCCCCHHHHHHHHHhcCCCCCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhh
Q 021866 48 PVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (306)
Q Consensus 48 ~i~viGDIHG~~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~ 118 (306)
++.++||+||+...+.++++.+.. .+.++++||++++++.+. ++. ...+++++||||..
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~~~--~~~~~~V~GNhD~~ 59 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------LEL--KAPVIAVRGNCDGE 59 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------hhc--CCcEEEEeCCCCCc
Confidence 578999999999999999998654 678999999999998765 111 23599999999975
No 34
>PRK09453 phosphodiesterase; Provisional
Probab=99.31 E-value=6.5e-11 Score=102.08 Aligned_cols=69 Identities=22% Similarity=0.301 Sum_probs=55.7
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCCCCCeEEEecccccCCCC--------cHHHHHHHHHhhhhcCCeEEEeCCCchhh
Q 021866 47 CPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYY--------SVETVTLLVALKVRYRDRITILRGNHESR 118 (306)
Q Consensus 47 ~~i~viGDIHG~~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~--------s~evl~ll~~lk~~~p~~v~lLrGNHE~~ 118 (306)
+++.++||+||++.++.++++.+...+.+.++++||++|+|+. +.+++.++..+ +..+++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCcch
Confidence 4789999999999999999988766667899999999999874 45566666544 33699999999975
Q ss_pred h
Q 021866 119 Q 119 (306)
Q Consensus 119 ~ 119 (306)
.
T Consensus 77 ~ 77 (182)
T PRK09453 77 V 77 (182)
T ss_pred h
Confidence 3
No 35
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.26 E-value=7.1e-11 Score=98.15 Aligned_cols=123 Identities=20% Similarity=0.283 Sum_probs=79.7
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCCCCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCC
Q 021866 47 CPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGF 126 (306)
Q Consensus 47 ~~i~viGDIHG~~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf 126 (306)
++++++||+|++.+.+.++++.+ ...+.++++||++|+ .++++.+... .+++++||||..........
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~ 68 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPNENDE 68 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHSEECT
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccchhhhhc
Confidence 47899999999999999999988 347788899999993 6677766544 59999999996553322110
Q ss_pred hHHHHHHhcCchhhHHHHhHhhccCceEEEeCcEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCC
Q 021866 127 YDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGW 206 (306)
Q Consensus 127 ~~e~~~~~~~~~~~~~~~~~f~~LPl~a~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~ 206 (306)
.. +....... ....+++++||.....
T Consensus 69 -----------~~------~~~~~~~~-~~~~~i~~~H~~~~~~------------------------------------ 94 (156)
T PF12850_consen 69 -----------EY------LLDALRLT-IDGFKILLSHGHPYDV------------------------------------ 94 (156)
T ss_dssp -----------CS------SHSEEEEE-ETTEEEEEESSTSSSS------------------------------------
T ss_pred -----------cc------cccceeee-ecCCeEEEECCCCccc------------------------------------
Confidence 00 11222211 1245799999965420
Q ss_pred ccCCCCCeeeeChhhHhhhhhhcCCcEEEeecceeccc
Q 021866 207 GISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEG 244 (306)
Q Consensus 207 ~~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~~~G 244 (306)
..+.+.+.+.+...++++++.||++.+.-
T Consensus 95 ---------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~ 123 (156)
T PF12850_consen 95 ---------QWDPAELREILSRENVDLVLHGHTHRPQV 123 (156)
T ss_dssp ---------TTTHHHHHHHHHHTTSSEEEESSSSSEEE
T ss_pred ---------ccChhhhhhhhcccCCCEEEcCCcccceE
Confidence 02334455667788999999999997543
No 36
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.25 E-value=1.5e-10 Score=97.42 Aligned_cols=63 Identities=17% Similarity=0.192 Sum_probs=49.5
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCC-CCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhh
Q 021866 47 CPVTVCGDIHGQFYDLIELFRIGGNA-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (306)
Q Consensus 47 ~~i~viGDIHG~~~~l~~ll~~~g~~-~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~ 118 (306)
+++.++||+||++.++..+++..... +.+.++++||++ +.+++.++.++. ..++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 46899999999998877777666554 678899999998 467777776552 2599999999973
No 37
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.16 E-value=2.6e-10 Score=102.11 Aligned_cols=157 Identities=18% Similarity=0.214 Sum_probs=98.8
Q ss_pred CcceeecCCCCHHHHH-HHHHhcCCCCCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhh----
Q 021866 48 PVTVCGDIHGQFYDLI-ELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQ---- 122 (306)
Q Consensus 48 ~i~viGDIHG~~~~l~-~ll~~~g~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~---- 122 (306)
+|+++|||||++.... +.++ ....+.++++||+++ .+.+++..+.++ +..+++++||||......
T Consensus 2 rIa~isDiHg~~~~~~~~~l~---~~~pD~Vl~~GDi~~---~~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALH---LLQPDLVLFVGDFGN---ESVQLVRAISSL----PLPKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred EEEEEecCCCCchHHHHHHHh---ccCCCEEEECCCCCc---ChHHHHHHHHhC----CCCeEEEcCCCcccccccccch
Confidence 5899999999987632 2333 234578999999986 356777766655 335999999999865320
Q ss_pred ----------------hcC------------------------ChH-HHHHHhcCchhhHHHHhHhhccCceEEEeCcEE
Q 021866 123 ----------------VYG------------------------FYD-ECLRKYGNANVWKYFTDLFDYLPLTALIESQIF 161 (306)
Q Consensus 123 ----------------~~g------------------------f~~-e~~~~~~~~~~~~~~~~~f~~LPl~a~i~~~~l 161 (306)
.++ +.+ ++...|+....++.+...++.++.+......+|
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 000 011 456667666677888888888864433334799
Q ss_pred EecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCccCCCCCeeeeChhhHhhhhhhcC----CcEEEee
Q 021866 162 CLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNG----LSLISRA 237 (306)
Q Consensus 162 ~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~----~~~iirg 237 (306)
+.|++++-..+..++ .|.- .|.+ . +..+|...+.+.+++.. .++++-|
T Consensus 152 iaH~~~~G~g~~~~~---------------~cg~---------d~~~--~--~~~~G~~~l~~ai~~~~~~~~~~l~~fG 203 (238)
T cd07397 152 LAHNGPSGLGSDAED---------------PCGR---------DWKP--P--GGDWGDPDLALAISQIQQGRQVPLVVFG 203 (238)
T ss_pred EeCcCCcCCCccccc---------------cccc---------ccCC--c--CCCCCCHHHHHHHHHHhccCCCCEEEeC
Confidence 999998644321111 1111 2221 1 12357666666666544 7999999
Q ss_pred cceec
Q 021866 238 HQLVM 242 (306)
Q Consensus 238 H~~~~ 242 (306)
|.+..
T Consensus 204 H~H~~ 208 (238)
T cd07397 204 HMHHR 208 (238)
T ss_pred CccCc
Confidence 99875
No 38
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.14 E-value=2.5e-10 Score=93.57 Aligned_cols=118 Identities=19% Similarity=0.166 Sum_probs=79.8
Q ss_pred CcceeecCCCCHHHHHHHHHhcCCCCCCeEEEecccccCCCCcH--HHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcC
Q 021866 48 PVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSV--ETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (306)
Q Consensus 48 ~i~viGDIHG~~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~--evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~g 125 (306)
++.++||+||++. .....+.+.++++||+++++..+- +.+.++.+++ .| .+++++||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCcCC-----
Confidence 4789999999977 123345678889999999886432 2444444442 22 36789999996311
Q ss_pred ChHHHHHHhcCchhhHHHHhHhhccCceEEEeCcEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCC
Q 021866 126 FYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCG 205 (306)
Q Consensus 126 f~~e~~~~~~~~~~~~~~~~~f~~LPl~a~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~ 205 (306)
.-+.+++++||.+.+.. + ..+.
T Consensus 66 -----------------------------~~~~~ilv~H~~p~~~~---~-------------------~~~~------- 87 (135)
T cd07379 66 -----------------------------PEDTDILVTHGPPYGHL---D-------------------LVSS------- 87 (135)
T ss_pred -----------------------------CCCCEEEEECCCCCcCc---c-------------------cccc-------
Confidence 12457899999432110 0 0000
Q ss_pred CccCCCCCeeeeChhhHhhhhhhcCCcEEEeecceeccceE
Q 021866 206 WGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYN 246 (306)
Q Consensus 206 ~~~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~ 246 (306)
....|.+.+.+++++.+.++++.||++.+.|++
T Consensus 88 --------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 --------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred --------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 123577888999999999999999999988876
No 39
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.10 E-value=8.2e-09 Score=91.99 Aligned_cols=71 Identities=11% Similarity=0.147 Sum_probs=58.0
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCCCCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhh
Q 021866 47 CPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (306)
Q Consensus 47 ~~i~viGDIHG~~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~ 118 (306)
.++.++||+||++..+.++++.+.....+.+|++||++++|+..-++..++..+... +..+++++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l-~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEA-HLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc-CCceEEEcCCCChH
Confidence 569999999999999999998775566788999999999997666676666666433 23599999999975
No 40
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=99.06 E-value=5.1e-10 Score=91.30 Aligned_cols=143 Identities=48% Similarity=0.794 Sum_probs=117.8
Q ss_pred hhhhcCChHHHHHHhcCchhhHH---HHhHhhccCceEEEeC-cEEEecCCCCCCC-CCHHHHHhhcccc--cCCCCCcc
Q 021866 120 ITQVYGFYDECLRKYGNANVWKY---FTDLFDYLPLTALIES-QIFCLHGGLSPSL-DTLDNIRALDRIQ--EVPHEGPM 192 (306)
Q Consensus 120 ~~~~~gf~~e~~~~~~~~~~~~~---~~~~f~~LPl~a~i~~-~~l~vHgGi~p~~-~~~~~i~~i~r~~--~~~~~~~~ 192 (306)
+...+++..++...++....|.. ..++|+.+|+.++..+ .++|.|++++|.. ..+++++.+.|.. .....+..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~ 82 (155)
T COG0639 3 LTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHT 82 (155)
T ss_pred hhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccc
Confidence 44566777777777754435666 9999999999988888 8999999999965 6788888888776 67777777
Q ss_pred cccccCCCCC--CCCCccCCCCCeeeeChhhHhhhhhhcCCcEEEeecceeccceEEecCCeEEEEEcCCCCc
Q 021866 193 CDLLWSDPDD--RCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYC 263 (306)
Q Consensus 193 ~dllWsdp~~--~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itvfSa~~y~ 263 (306)
.+.+|++|.. ...|.++++|.+..+ .+....|......+.+.++|+....++...+.+..+|.|++++|+
T Consensus 83 ~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~ 154 (155)
T COG0639 83 HDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYC 154 (155)
T ss_pred ccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEeccccc
Confidence 8889999874 688999999998877 788888997777777999999999999888775799999999986
No 41
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.99 E-value=1.9e-08 Score=86.66 Aligned_cols=58 Identities=24% Similarity=0.346 Sum_probs=42.0
Q ss_pred CcceeecCC-CCHH-----HHHHHHHhcCCCCCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchh
Q 021866 48 PVTVCGDIH-GQFY-----DLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHES 117 (306)
Q Consensus 48 ~i~viGDIH-G~~~-----~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~ 117 (306)
+|.||||.| |.-. .+.++++. .+.+.++.+||+++ .+++.++..+. ..++.++||||.
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~ 64 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDE 64 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCc
Confidence 478999999 5533 24444433 44678999999987 77777776652 259999999996
No 42
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.91 E-value=1.1e-08 Score=81.12 Aligned_cols=117 Identities=25% Similarity=0.330 Sum_probs=82.6
Q ss_pred ceeecCCCCHHHHHHHH--HhcCCCCCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCCh
Q 021866 50 TVCGDIHGQFYDLIELF--RIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFY 127 (306)
Q Consensus 50 ~viGDIHG~~~~l~~ll--~~~g~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~ 127 (306)
+++||+|+......... ........+.++++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47999999998887654 33444556788899999999998777655422333334557999999999
Q ss_pred HHHHHHhcCchhhHHHHhHhhccCceEEEeCcEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCc
Q 021866 128 DECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWG 207 (306)
Q Consensus 128 ~e~~~~~~~~~~~~~~~~~f~~LPl~a~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~ 207 (306)
++++|+.+.+...... +. .
T Consensus 70 --------------------------------i~~~H~~~~~~~~~~~---------------------~~-----~--- 88 (131)
T cd00838 70 --------------------------------ILLTHGPPYDPLDELS---------------------PD-----E--- 88 (131)
T ss_pred --------------------------------EEEeccCCCCCchhhc---------------------cc-----c---
Confidence 8999997654331100 00 0
Q ss_pred cCCCCCeeeeChhhHhhhhhhcCCcEEEeecceeccceE
Q 021866 208 ISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYN 246 (306)
Q Consensus 208 ~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~ 246 (306)
......+...+...+.+.+|.||++....+.
T Consensus 89 --------~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 89 --------DPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred --------hhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 0145667788888999999999999866554
No 43
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.90 E-value=6.9e-08 Score=82.56 Aligned_cols=66 Identities=23% Similarity=0.308 Sum_probs=47.4
Q ss_pred cceeecCCCCHHHHHHHHHhcCCCCCCeEEEecccccCCCCc-HHHHHHHHHhhhhcCCeEEEeCCCchhhhh
Q 021866 49 VTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYS-VETVTLLVALKVRYRDRITILRGNHESRQI 120 (306)
Q Consensus 49 i~viGDIHG~~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s-~evl~ll~~lk~~~p~~v~lLrGNHE~~~~ 120 (306)
|.++||+||++..+.+ ......+.+.+|+.||++++|... .+.+..+..+ +..+++++||||....
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~~~----~~p~~~v~GNHD~~~~ 67 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLLAI----GVPVLAVPGNCDTPEI 67 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHHhc----CCCEEEEcCCCCCHHH
Confidence 5789999999998876 333345568899999999999763 3333333322 3459999999997543
No 44
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.84 E-value=4.5e-08 Score=88.16 Aligned_cols=214 Identities=14% Similarity=0.141 Sum_probs=106.4
Q ss_pred CCcceeecCCCCH------HHHHHHHHhcCCCCCCeEEEecccccC--C-----CCcHHHHHHHHHhhhhcCCeEEEeCC
Q 021866 47 CPVTVCGDIHGQF------YDLIELFRIGGNAPDTNYLFMGDYVDR--G-----YYSVETVTLLVALKVRYRDRITILRG 113 (306)
Q Consensus 47 ~~i~viGDIHG~~------~~l~~ll~~~g~~~~~~~vfLGD~vDr--G-----~~s~evl~ll~~lk~~~p~~v~lLrG 113 (306)
+++++++|+|... ..+.+.++.. ....+.++++||++|. | +...+++.++..++.. +-.+++++|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~-g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS-GVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHc-CCeEEEEeC
Confidence 4789999999542 2344555432 2345788899999985 2 2345667777777543 236999999
Q ss_pred CchhhhhhhhcCChHHHHHHhcCchhhHHHHhHhhccCceEEE-eCcEEEecCCCCCCCCCHHH-HHhhcccccC---CC
Q 021866 114 NHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALI-ESQIFCLHGGLSPSLDTLDN-IRALDRIQEV---PH 188 (306)
Q Consensus 114 NHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LPl~a~i-~~~~l~vHgGi~p~~~~~~~-i~~i~r~~~~---~~ 188 (306)
|||..... ......+. ..+.. |....+ +.+++++||-.-+..+...+ .+.+-|.... ..
T Consensus 79 NHD~~~~~-------~~~~~~g~--------~~l~~-~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~ 142 (241)
T PRK05340 79 NRDFLLGK-------RFAKAAGM--------TLLPD-PSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPWLQWLFL 142 (241)
T ss_pred CCchhhhH-------HHHHhCCC--------EEeCC-cEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHHHHHHHH
Confidence 99974321 11111211 11111 222122 34699999976542221111 2222111000 00
Q ss_pred CCcccccccCCCCCCCCCc-----cCC-CCCe-eeeChhhHhhhhhhcCCcEEEeecceeccceEEecCCeEEEEEcCCC
Q 021866 189 EGPMCDLLWSDPDDRCGWG-----ISP-RGAG-YTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPN 261 (306)
Q Consensus 189 ~~~~~dllWsdp~~~~~~~-----~~~-rg~g-~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itvfSa~~ 261 (306)
.......+|-. ..+. .+. +... ....++.+.+.+++.+++++|.||++.+.-.....++.-++-.+-++
T Consensus 143 ~~p~~~~~~ia----~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~~lgd 218 (241)
T PRK05340 143 ALPLSIRLRIA----AKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRIVLGD 218 (241)
T ss_pred hCCHHHHHHHH----HHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEEEeCC
Confidence 00000001100 0000 000 1111 12345677888899999999999999865343322321112122222
Q ss_pred CcccCCCcEEEEEEcCCCceEEEEEe
Q 021866 262 YCYRCGNMAAILEIGENMEQNFLQFD 287 (306)
Q Consensus 262 y~~~~~n~~avl~i~~~~~~~~~~~~ 287 (306)
. ...+.++.+++++ .+++.|.
T Consensus 219 w----~~~~~~~~~~~~~-~~~~~~~ 239 (241)
T PRK05340 219 W----HEQGSVLKVDADG-VELIPFP 239 (241)
T ss_pred C----CCCCeEEEEECCc-eEEEeCC
Confidence 2 2347788888863 5555543
No 45
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.82 E-value=8.2e-09 Score=87.36 Aligned_cols=67 Identities=21% Similarity=0.172 Sum_probs=47.0
Q ss_pred cceeecCCCCHHHHHHHH-HhcCCCCCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhh
Q 021866 49 VTVCGDIHGQFYDLIELF-RIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (306)
Q Consensus 49 i~viGDIHG~~~~l~~ll-~~~g~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~ 118 (306)
+.++||+|++.......+ +.....+.+.++++||+++++.....+. ++... ..+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~~~--~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLLAL--KGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHHhh--cCCccEEEeCCCcceE
Confidence 468999999987765554 2233455677889999999887655443 22222 2344699999999986
No 46
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.82 E-value=1.9e-07 Score=82.06 Aligned_cols=212 Identities=19% Similarity=0.175 Sum_probs=119.9
Q ss_pred CCCcceeecCCCCHHHHHHHHHhcCCCCCCeEEEecccc--cCCCCcHHHHH-HHHHhhhhcCCeEEEeCCCchhhhhhh
Q 021866 46 KCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYV--DRGYYSVETVT-LLVALKVRYRDRITILRGNHESRQITQ 122 (306)
Q Consensus 46 ~~~i~viGDIHG~~~~l~~ll~~~g~~~~~~~vfLGD~v--DrG~~s~evl~-ll~~lk~~~p~~v~lLrGNHE~~~~~~ 122 (306)
.+++.++.|+||.++.+.+++..++....+-+++.||+. ++|+.-...-. .+..++. ....++.++||.|...+..
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~~-~~~~v~avpGNcD~~~v~~ 81 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALKE-LGIPVLAVPGNCDPPEVID 81 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHHh-cCCeEEEEcCCCChHHHHH
Confidence 467999999999999999999998888888899999999 88875322221 1333332 2347999999999876532
Q ss_pred hcCChHHHHHHhcCchhhHHHHhHhhccCceEEEeCcEEEecCCCCCCC-C-----CHHHHHhhccc-ccCCCCCccccc
Q 021866 123 VYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSL-D-----TLDNIRALDRI-QEVPHEGPMCDL 195 (306)
Q Consensus 123 ~~gf~~e~~~~~~~~~~~~~~~~~f~~LPl~a~i~~~~l~vHgGi~p~~-~-----~~~~i~~i~r~-~~~~~~~~~~dl 195 (306)
.. ...+ ..+. +-.-.+++-.+|-=||..|.. . +.++|.+.-+. .+...+..---+
T Consensus 82 ~l-------~~~~-~~v~----------~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~~~~Il~ 143 (226)
T COG2129 82 VL-------KNAG-VNVH----------GRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADNPVNILL 143 (226)
T ss_pred HH-------Hhcc-cccc----------cceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccCcceEEE
Confidence 10 0110 0000 001112222333333332211 0 11222111100 000000000000
Q ss_pred ccCCCCCCCCCccCCCCCeeeeChhhHhhhhhhcCCcEEEeecceeccceEEecCCeEEEEEcCCCCcccCCCcEEEEEE
Q 021866 196 LWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEI 275 (306)
Q Consensus 196 lWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~~avl~i 275 (306)
+-+-|-+ .....+-| -.--|..++++++++.+-.+.++||-+...|+...-+ ||+..|+-.+ ..+.|++.+
T Consensus 144 ~HaPP~g--t~~d~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG~----TivVNPG~~~--~g~yA~i~l 214 (226)
T COG2129 144 THAPPYG--TLLDTPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIGN----TIVVNPGPLG--EGRYALIEL 214 (226)
T ss_pred ecCCCCC--ccccCCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccccCC----eEEECCCCcc--CceEEEEEe
Confidence 1111100 00001111 0246999999999999999999999999889876443 7788887743 468899999
Q ss_pred cCCCceEEEEE
Q 021866 276 GENMEQNFLQF 286 (306)
Q Consensus 276 ~~~~~~~~~~~ 286 (306)
+++ .++..+|
T Consensus 215 ~~~-~Vk~~~~ 224 (226)
T COG2129 215 EKE-VVKLEQF 224 (226)
T ss_pred cCc-EEEEEEe
Confidence 887 6666665
No 47
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.80 E-value=1.2e-07 Score=84.03 Aligned_cols=193 Identities=17% Similarity=0.138 Sum_probs=102.6
Q ss_pred CcceeecCCCCHH----H----HHHHHHhcCCCCCCeEEEecccccCCCCcHH---HHHHHHHhhhhcCCeEEEeCCCch
Q 021866 48 PVTVCGDIHGQFY----D----LIELFRIGGNAPDTNYLFMGDYVDRGYYSVE---TVTLLVALKVRYRDRITILRGNHE 116 (306)
Q Consensus 48 ~i~viGDIHG~~~----~----l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~e---vl~ll~~lk~~~p~~v~lLrGNHE 116 (306)
+++++||+|--.+ . +..+.+.+.....+.+|++||++|.|....+ ....+..+.. .+-.++.++||||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~-~~~p~~~~~GNHD 80 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDK-AGIPYSVLAGNHD 80 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHH-cCCcEEEECCCCc
Confidence 5789999995322 2 2334444444456778899999999984332 2223333321 1224899999999
Q ss_pred hhhhhhhcCChHHHHHHhcCchhhHHHHhHhhccCceEEEeCcEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccc
Q 021866 117 SRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLL 196 (306)
Q Consensus 117 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LPl~a~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dll 196 (306)
... .-.+.. ...-++.+.+.++..|- ..-++++|-=+.+...
T Consensus 81 ~~~-~ld~~~---------~~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~~------------------------ 122 (214)
T cd07399 81 LVL-ALEFGP---------RDEVLQWANEVLKKHPD----RPAILTTHAYLNCDDS------------------------ 122 (214)
T ss_pred chh-hCCCCC---------CHHHHHHHHHHHHHCCC----CCEEEEecccccCCCC------------------------
Confidence 432 111110 12223344455554331 1347888873321110
Q ss_pred cCCCCCCCCCccCCCCCeeeeChhhHhhhhhhc-CCcEEEeecceeccceEEe-----cCCeEEEEEcCCCCcccCCC-c
Q 021866 197 WSDPDDRCGWGISPRGAGYTFGQDIASQFNHTN-GLSLISRAHQLVMEGYNWC-----QDKNVVTVFSAPNYCYRCGN-M 269 (306)
Q Consensus 197 Wsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~-~~~~iirgH~~~~~G~~~~-----~~~~~itvfSa~~y~~~~~n-~ 269 (306)
|.+. ...| .....+.+.+.+.++++ +++.++.||.+.. +.... .++.+..+.+......+.+| .
T Consensus 123 ~~~~--~~~~------~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~-~~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~~ 193 (214)
T cd07399 123 RPDS--IDYD------SDVNDGQQIWDKLVKKNDNVFMVLSGHVHGA-GRTTLVSVGDAGRTVHQMLADYQGEPNGGNGF 193 (214)
T ss_pred cCcc--cccc------cccccHHHHHHHHHhCCCCEEEEEccccCCC-ceEEEcccCCCCCEeeEEeecccCCCCCCcce
Confidence 1100 0000 01123555677888888 7999999999864 33322 13345555443322112222 2
Q ss_pred EEEEEEcCC-CceEEEEEeC
Q 021866 270 AAILEIGEN-MEQNFLQFDP 288 (306)
Q Consensus 270 ~avl~i~~~-~~~~~~~~~~ 288 (306)
=.++.++++ .++.+.+|.|
T Consensus 194 ~r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 194 LRLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred EEEEEEecCCCEEEEEeCCC
Confidence 357888877 4888888876
No 48
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.75 E-value=7.9e-08 Score=78.41 Aligned_cols=107 Identities=20% Similarity=0.100 Sum_probs=74.4
Q ss_pred ceeecCCCCHHHHHHHHHhcCCCCCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCChHH
Q 021866 50 TVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDE 129 (306)
Q Consensus 50 ~viGDIHG~~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e 129 (306)
.|+||.||..+.+.++... ..+.+.++++||+. .+++..+..++ +..++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc-------------
Confidence 4899999997777776654 45678899999983 34555555541 224899999999
Q ss_pred HHHHhcCchhhHHHHhHhhccCceEEEeCcEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCccC
Q 021866 130 CLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGIS 209 (306)
Q Consensus 130 ~~~~~~~~~~~~~~~~~f~~LPl~a~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~ 209 (306)
-+++++|+- |... .+.+ .
T Consensus 57 ----------------------------~~Ilv~H~p--p~~~-----------------------~~~~----~----- 74 (129)
T cd07403 57 ----------------------------VDILLTHAP--PAGI-----------------------GDGE----D----- 74 (129)
T ss_pred ----------------------------cCEEEECCC--CCcC-----------------------cCcc----c-----
Confidence 478999983 2110 0000 0
Q ss_pred CCCCeeeeChhhHhhhhhhcCCcEEEeecceeccceE
Q 021866 210 PRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYN 246 (306)
Q Consensus 210 ~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~ 246 (306)
...-|.+.+.+++++.+.++++.||++.+..+.
T Consensus 75 ----~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 75 ----FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred ----ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 012356778888899999999999999877765
No 49
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.70 E-value=7e-08 Score=86.38 Aligned_cols=207 Identities=12% Similarity=0.094 Sum_probs=99.8
Q ss_pred cceeecCCCCH------HHHHHHHHhcCCCCCCeEEEecccccCC-----CC--cHHHHHHHHHhhhhcCCeEEEeCCCc
Q 021866 49 VTVCGDIHGQF------YDLIELFRIGGNAPDTNYLFMGDYVDRG-----YY--SVETVTLLVALKVRYRDRITILRGNH 115 (306)
Q Consensus 49 i~viGDIHG~~------~~l~~ll~~~g~~~~~~~vfLGD~vDrG-----~~--s~evl~ll~~lk~~~p~~v~lLrGNH 115 (306)
+++++|+|... ..+.+.+.... .+.+.++++||++|.. +. ..++..++..++.. +..+++++|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~-~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~-~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEA-RKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQ-GVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhh-ccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 36899999542 23444444322 2567888999999952 11 13455566666533 34799999999
Q ss_pred hhhhhhhhcCChHHHHHHhcCchhhHHHHhHhhccCceEEEeCcEEEecCCCCCCCCC-HHHHHhhcccc-------cCC
Q 021866 116 ESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDT-LDNIRALDRIQ-------EVP 187 (306)
Q Consensus 116 E~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LPl~a~i~~~~l~vHgGi~p~~~~-~~~i~~i~r~~-------~~~ 187 (306)
|...-. ......+ ..++..--...+-+.+++++||-.-..-+. ....+.+-|.. ..|
T Consensus 79 D~~~~~-------~~~~~~g--------i~~l~~~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~l~ 143 (231)
T TIGR01854 79 DFLIGK-------RFAREAG--------MTLLPDPSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFLHLP 143 (231)
T ss_pred chhhhH-------HHHHHCC--------CEEECCCEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHHhCC
Confidence 974311 0111111 011111111111245899999964321111 11112221110 000
Q ss_pred CC--CcccccccCCCCCCCCCccCCCCCeeeeChhhHhhhhhhcCCcEEEeecceeccceEEecCCeEEEEEcCCCCccc
Q 021866 188 HE--GPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYR 265 (306)
Q Consensus 188 ~~--~~~~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itvfSa~~y~~~ 265 (306)
.. ..+...+++........ .+. .-....++.+.+.++..+++++|.||++.+.-.....++.-.+-.+-++.
T Consensus 144 ~~~r~~l~~~~~~~s~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~~~~~~~~lgdW--- 217 (231)
T TIGR01854 144 LAVRVKLARKIRAESRADKQM--KSQ-DIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQADGQPATRIVLGDW--- 217 (231)
T ss_pred HHHHHHHHHHHHHHHHHhcCC--Ccc-hhhCCCHHHHHHHHHHcCCCEEEECCccCcceeecccCCCccEEEEECCC---
Confidence 00 00112222211100000 000 11223566788888999999999999998664443333322233333333
Q ss_pred CCCcEEEEEEcCCC
Q 021866 266 CGNMAAILEIGENM 279 (306)
Q Consensus 266 ~~n~~avl~i~~~~ 279 (306)
...+.++.+++++
T Consensus 218 -~~~~~~~~~~~~g 230 (231)
T TIGR01854 218 -YRQGSILRVDADG 230 (231)
T ss_pred -ccCCeEEEEcCCC
Confidence 1246677777764
No 50
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.67 E-value=3.3e-07 Score=75.46 Aligned_cols=118 Identities=22% Similarity=0.194 Sum_probs=75.4
Q ss_pred cceeecCCCCHH------H----HHHHHHhcCCCCCCeEEEecccccCCCCc--HHHHHHHHHhhhhcCCeEEEeCCCch
Q 021866 49 VTVCGDIHGQFY------D----LIELFRIGGNAPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYRDRITILRGNHE 116 (306)
Q Consensus 49 i~viGDIHG~~~------~----l~~ll~~~g~~~~~~~vfLGD~vDrG~~s--~evl~ll~~lk~~~p~~v~lLrGNHE 116 (306)
|+.++|+|=... . |.++++.....+.+.++++||+++.|... .+...++..++... ..+++++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 467899993211 1 22344444455678899999999988742 12334444443221 26999999999
Q ss_pred hhhhhhhcCChHHHHHHhcCchhhHHHHhHhhccCceEEEeCcEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccc
Q 021866 117 SRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLL 196 (306)
Q Consensus 117 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LPl~a~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dll 196 (306)
. ++++|..+.+....
T Consensus 80 ~------------------------------------------iv~~Hhp~~~~~~~----------------------- 94 (144)
T cd07400 80 V------------------------------------------IVVLHHPLVPPPGS----------------------- 94 (144)
T ss_pred E------------------------------------------EEEecCCCCCCCcc-----------------------
Confidence 7 88899855432110
Q ss_pred cCCCCCCCCCccCCCCCeeeeChhhHhhhhhhcCCcEEEeecceeccceEE
Q 021866 197 WSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNW 247 (306)
Q Consensus 197 Wsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~ 247 (306)
|. .. .. +.+.+.+++++.++++++.||++.+..+.+
T Consensus 95 ~~-----~~---------~~-~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~ 130 (144)
T cd07400 95 GR-----ER---------LL-DAGDALKLLAEAGVDLVLHGHKHVPYVGNI 130 (144)
T ss_pred cc-----cc---------CC-CHHHHHHHHHHcCCCEEEECCCCCcCeeec
Confidence 00 00 01 566788889999999999999998765543
No 51
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.53 E-value=4e-06 Score=71.74 Aligned_cols=160 Identities=16% Similarity=0.161 Sum_probs=98.7
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCCCCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCC
Q 021866 47 CPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGF 126 (306)
Q Consensus 47 ~~i~viGDIHG~~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf 126 (306)
+++.|+||.||...+..+..+.......+.+|.+||++..... ..+-. ....+++.++||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~-----~~l~~---~~~~~i~~V~GN~D~~~~~----- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTL-----DALEG---GLAAKLIAVRGNCDGEVDQ----- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccch-----HHhhc---ccccceEEEEccCCCcccc-----
Confidence 5689999999999765556665555667788899999986552 11111 0135799999999974321
Q ss_pred hHHHHHHhcCchhhHHHHhHhhccCceE--EEe-CcEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCC
Q 021866 127 YDECLRKYGNANVWKYFTDLFDYLPLTA--LIE-SQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDR 203 (306)
Q Consensus 127 ~~e~~~~~~~~~~~~~~~~~f~~LPl~a--~i~-~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~ 203 (306)
..+|-.. .++ -+++++||..-...
T Consensus 69 ---------------------~~~p~~~~~~~~g~ki~l~HGh~~~~~-------------------------------- 95 (172)
T COG0622 69 ---------------------EELPEELVLEVGGVKIFLTHGHLYFVK-------------------------------- 95 (172)
T ss_pred ---------------------ccCChhHeEEECCEEEEEECCCccccc--------------------------------
Confidence 2233221 223 48999999543211
Q ss_pred CCCccCCCCCeeeeChhhHhhhhhhcCCcEEEeecceeccceEEecCCeEEEEEcCCCCcccC--CCcEEEEEEcCC-Cc
Q 021866 204 CGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRC--GNMAAILEIGEN-ME 280 (306)
Q Consensus 204 ~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itvfSa~~y~~~~--~n~~avl~i~~~-~~ 280 (306)
.....+..+-+..+++.+|.|||+.+.=.+. ++ +++-+|+-+... ++..+++.++.+ .+
T Consensus 96 -------------~~~~~l~~la~~~~~Dvli~GHTH~p~~~~~--~~---i~~vNPGS~s~pr~~~~~sy~il~~~~~~ 157 (172)
T COG0622 96 -------------TDLSLLEYLAKELGADVLIFGHTHKPVAEKV--GG---ILLVNPGSVSGPRGGNPASYAILDVDNLE 157 (172)
T ss_pred -------------cCHHHHHHHHHhcCCCEEEECCCCcccEEEE--CC---EEEEcCCCcCCCCCCCCcEEEEEEcCCCE
Confidence 1123344556677899999999998653322 33 345576665432 344455666543 56
Q ss_pred eEEEEEeCCC
Q 021866 281 QNFLQFDPAP 290 (306)
Q Consensus 281 ~~~~~~~~~~ 290 (306)
+....++...
T Consensus 158 ~~~~~~~~~~ 167 (172)
T COG0622 158 VEVLFLERDR 167 (172)
T ss_pred EEEEEeeccc
Confidence 7777776544
No 52
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.50 E-value=3.1e-07 Score=82.48 Aligned_cols=68 Identities=19% Similarity=0.148 Sum_probs=48.8
Q ss_pred CcceeecCCCCH------HHHHHHHHhcCCCCCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhh
Q 021866 48 PVTVCGDIHGQF------YDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (306)
Q Consensus 48 ~i~viGDIHG~~------~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~ 118 (306)
++.+++|+|+++ ..+.++++.+...+.+-+|+.||++++.+.+.+.+..+.++ .+..+++++||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 478999999753 22556666665556778999999999876666655555443 234599999999964
No 53
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.50 E-value=7.5e-07 Score=81.71 Aligned_cols=70 Identities=19% Similarity=0.128 Sum_probs=52.2
Q ss_pred CCcceeecCCCC----HHHHHHHHHhcCCCCCCeEEEecccccCC-C-CcHHHHHHHHHhhhhcCCeEEEeCCCchhh
Q 021866 47 CPVTVCGDIHGQ----FYDLIELFRIGGNAPDTNYLFMGDYVDRG-Y-YSVETVTLLVALKVRYRDRITILRGNHESR 118 (306)
Q Consensus 47 ~~i~viGDIHG~----~~~l~~ll~~~g~~~~~~~vfLGD~vDrG-~-~s~evl~ll~~lk~~~p~~v~lLrGNHE~~ 118 (306)
.++++++|+|.. ...+.++++.....+.+-++++||++|++ + ...++...+..++...| ++.+.||||..
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~p--v~~V~GNHD~~ 125 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAECAP--TFACFGNHDRP 125 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhcCC--EEEecCCCCcc
Confidence 579999999976 55577777776656677888999999954 2 23345666666765444 99999999974
No 54
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.41 E-value=2e-05 Score=71.61 Aligned_cols=71 Identities=14% Similarity=-0.004 Sum_probs=43.1
Q ss_pred CcceeecCCCCH----------------HHHHHHHHhcCC--CCCCeEEEecccccCCCCcH---HHHHHHHH-hhhh-c
Q 021866 48 PVTVCGDIHGQF----------------YDLIELFRIGGN--APDTNYLFMGDYVDRGYYSV---ETVTLLVA-LKVR-Y 104 (306)
Q Consensus 48 ~i~viGDIHG~~----------------~~l~~ll~~~g~--~~~~~~vfLGD~vDrG~~s~---evl~ll~~-lk~~-~ 104 (306)
+++++||+|-.. ..+.++++.+.. +..+-++++||+++.|...- +....+.+ ++.. .
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDP 85 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccC
Confidence 577888888663 124555555433 24567889999999887541 11222222 2221 1
Q ss_pred CCeEEEeCCCchhh
Q 021866 105 RDRITILRGNHESR 118 (306)
Q Consensus 105 p~~v~lLrGNHE~~ 118 (306)
+-.++.++||||..
T Consensus 86 ~vp~~~i~GNHD~~ 99 (262)
T cd07395 86 DIPLVCVCGNHDVG 99 (262)
T ss_pred CCcEEEeCCCCCCC
Confidence 23599999999974
No 55
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.38 E-value=3.6e-06 Score=75.13 Aligned_cols=67 Identities=27% Similarity=0.280 Sum_probs=45.5
Q ss_pred CcceeecCCCC------------HHHHHHHHHhcCCC--CCCeEEEecccccCCCCc-HH-HHHHHHHhhhhcCCeEEEe
Q 021866 48 PVTVCGDIHGQ------------FYDLIELFRIGGNA--PDTNYLFMGDYVDRGYYS-VE-TVTLLVALKVRYRDRITIL 111 (306)
Q Consensus 48 ~i~viGDIHG~------------~~~l~~ll~~~g~~--~~~~~vfLGD~vDrG~~s-~e-vl~ll~~lk~~~p~~v~lL 111 (306)
|+++++|+|=. ...+.++++.+... +.+-+|++||+++.|... .+ ++..+..+ +-.++.+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~----~~p~~~v 76 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAAL----PIPVYLL 76 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhhc----CCCEEEe
Confidence 57899999944 34567777765443 567888999999987531 12 22333222 4459999
Q ss_pred CCCchhh
Q 021866 112 RGNHESR 118 (306)
Q Consensus 112 rGNHE~~ 118 (306)
+||||..
T Consensus 77 ~GNHD~~ 83 (240)
T cd07402 77 PGNHDDR 83 (240)
T ss_pred CCCCCCH
Confidence 9999974
No 56
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.33 E-value=4.9e-05 Score=69.69 Aligned_cols=71 Identities=14% Similarity=0.083 Sum_probs=47.2
Q ss_pred CCCcceeecCC-C-----------CHHHHHHHHHhcCC--CCCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEe
Q 021866 46 KCPVTVCGDIH-G-----------QFYDLIELFRIGGN--APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITIL 111 (306)
Q Consensus 46 ~~~i~viGDIH-G-----------~~~~l~~ll~~~g~--~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lL 111 (306)
+.+++.++|+| . ..+.|.++++.+.. ++.+-+|+.||+++.|. .+-+..+.+.-...+..++.+
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v 91 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWL 91 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEe
Confidence 35799999999 1 14567777776533 34577889999999874 233333333222234569999
Q ss_pred CCCchhh
Q 021866 112 RGNHESR 118 (306)
Q Consensus 112 rGNHE~~ 118 (306)
+||||..
T Consensus 92 ~GNHD~~ 98 (275)
T PRK11148 92 PGNHDFQ 98 (275)
T ss_pred CCCCCCh
Confidence 9999974
No 57
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.32 E-value=1.6e-05 Score=72.73 Aligned_cols=72 Identities=18% Similarity=0.226 Sum_probs=48.3
Q ss_pred CcceeecCC-CC------------HHHHHHHHHhcCCCCCCeEEEecccccCCCC-cHHHHHHHHHhhhhcCCeEEEeCC
Q 021866 48 PVTVCGDIH-GQ------------FYDLIELFRIGGNAPDTNYLFMGDYVDRGYY-SVETVTLLVALKVRYRDRITILRG 113 (306)
Q Consensus 48 ~i~viGDIH-G~------------~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~-s~evl~ll~~lk~~~p~~v~lLrG 113 (306)
|+.++||+| +. ...+.++++.+...+.+-+|++||+++.|.. +.+-+..+.+.-...+-.++.++|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 678999999 21 3556677776655556788899999998873 223333333332222335999999
Q ss_pred Cchhhh
Q 021866 114 NHESRQ 119 (306)
Q Consensus 114 NHE~~~ 119 (306)
|||...
T Consensus 82 NHD~~~ 87 (267)
T cd07396 82 NHDLYN 87 (267)
T ss_pred cccccc
Confidence 999864
No 58
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.28 E-value=1.1e-06 Score=77.49 Aligned_cols=71 Identities=21% Similarity=0.189 Sum_probs=52.6
Q ss_pred CCcceeecCCCCHH----HHHHHHHhcCCCCCCeEEEecccccCCCCcH-HHHHHHHHhhhhcCCeEEEeCCCchhhh
Q 021866 47 CPVTVCGDIHGQFY----DLIELFRIGGNAPDTNYLFMGDYVDRGYYSV-ETVTLLVALKVRYRDRITILRGNHESRQ 119 (306)
Q Consensus 47 ~~i~viGDIHG~~~----~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~-evl~ll~~lk~~~p~~v~lLrGNHE~~~ 119 (306)
.++.+++|+|+... .+.++++.+.....+.+++.||++|.+.... .+..++..++. +..++++.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~~--~~~v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLKA--PLGVYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccCC--CCCEEEECCCccccc
Confidence 47899999998743 5677777665555678889999999988764 55555555533 335999999999853
No 59
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.24 E-value=1.3e-05 Score=79.84 Aligned_cols=72 Identities=22% Similarity=0.308 Sum_probs=44.4
Q ss_pred CCCcceeecCC-CCH----HHHHHHHHhcC---------CCCCCeEEEecccccC-CCCc---------------HHHHH
Q 021866 46 KCPVTVCGDIH-GQF----YDLIELFRIGG---------NAPDTNYLFMGDYVDR-GYYS---------------VETVT 95 (306)
Q Consensus 46 ~~~i~viGDIH-G~~----~~l~~ll~~~g---------~~~~~~~vfLGD~vDr-G~~s---------------~evl~ 95 (306)
+..+++++|+| |.- ..+..+++.+. ....+.+|++||++|. |..+ .++..
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 35689999999 542 22344444332 2234688999999994 3211 13444
Q ss_pred HHHHhhhhcCCeEEEeCCCchhhh
Q 021866 96 LLVALKVRYRDRITILRGNHESRQ 119 (306)
Q Consensus 96 ll~~lk~~~p~~v~lLrGNHE~~~ 119 (306)
+|.++.. .-.|++++||||...
T Consensus 323 ~L~~L~~--~i~V~~ipGNHD~~~ 344 (504)
T PRK04036 323 YLKQIPE--DIKIIISPGNHDAVR 344 (504)
T ss_pred HHHhhhc--CCeEEEecCCCcchh
Confidence 5555532 235999999999764
No 60
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=98.16 E-value=1.3e-05 Score=71.81 Aligned_cols=65 Identities=22% Similarity=0.209 Sum_probs=40.4
Q ss_pred cceeecCCCC---------HH----H-HHHHHHhcC--CCCCCeEEEecccccCCCCc--HHHHHHHHHhhhhcCCeEEE
Q 021866 49 VTVCGDIHGQ---------FY----D-LIELFRIGG--NAPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYRDRITI 110 (306)
Q Consensus 49 i~viGDIHG~---------~~----~-l~~ll~~~g--~~~~~~~vfLGD~vDrG~~s--~evl~ll~~lk~~~p~~v~l 110 (306)
|++++|+|-. +. + +.++.+... .++.+-+|+.||++++++.. .+.+.++.++ |..+++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~~~~~~l~~l~~l----~~~v~~ 76 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLEEAKLDLAWIDAL----PGTKVL 76 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChHHHHHHHHHHHhC----CCCeEE
Confidence 5789999955 21 2 233333221 13677888999999877632 2333333333 335899
Q ss_pred eCCCchh
Q 021866 111 LRGNHES 117 (306)
Q Consensus 111 LrGNHE~ 117 (306)
+.||||.
T Consensus 77 V~GNHD~ 83 (232)
T cd07393 77 LKGNHDY 83 (232)
T ss_pred EeCCccc
Confidence 9999997
No 61
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.16 E-value=2.3e-05 Score=68.25 Aligned_cols=70 Identities=13% Similarity=0.083 Sum_probs=43.7
Q ss_pred CCcceeecCCCCHH------------HHHHHHHhcCCCCCCeEEEecccccCCCCc---HHHHHHHHHhhhhcCCeEEEe
Q 021866 47 CPVTVCGDIHGQFY------------DLIELFRIGGNAPDTNYLFMGDYVDRGYYS---VETVTLLVALKVRYRDRITIL 111 (306)
Q Consensus 47 ~~i~viGDIHG~~~------------~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s---~evl~ll~~lk~~~p~~v~lL 111 (306)
.++.+++|+|-... .+..+.+.+.....+.+|++||+++.+... .+.+..+++......-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 36889999996222 122222223334557899999999977653 455555444322223358999
Q ss_pred CCCch
Q 021866 112 RGNHE 116 (306)
Q Consensus 112 rGNHE 116 (306)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 62
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.05 E-value=2.7e-05 Score=69.20 Aligned_cols=198 Identities=16% Similarity=0.160 Sum_probs=101.8
Q ss_pred ceeecCCCC------HHHHHHHHHhcCCCCCCeEEEecccccC--CCC-----cHHHHHHHHHhhhhcCCeEEEeCCCch
Q 021866 50 TVCGDIHGQ------FYDLIELFRIGGNAPDTNYLFMGDYVDR--GYY-----SVETVTLLVALKVRYRDRITILRGNHE 116 (306)
Q Consensus 50 ~viGDIHG~------~~~l~~ll~~~g~~~~~~~vfLGD~vDr--G~~-----s~evl~ll~~lk~~~p~~v~lLrGNHE 116 (306)
+.|+|+|=. .+.|.+.++... +..+.++++||++|- |.+ -.+|...|..+. ..+.+++++.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a-~~G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLA-RKGTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHH-hcCCeEEEecCchH
Confidence 368999854 223455555432 355788899999972 222 234555554443 34568999999999
Q ss_pred hhhhhhhcCChHHHHHHhcCchhhHHHHhHhhccCceEE---EeCcEEEecCCCCCCCC------------CHHHHHhhc
Q 021866 117 SRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTAL---IESQIFCLHGGLSPSLD------------TLDNIRALD 181 (306)
Q Consensus 117 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~~LPl~a~---i~~~~l~vHgGi~p~~~------------~~~~i~~i~ 181 (306)
... ...+ ....| -+.-+|-..+ -+.+++.+||-.--... .+.+..-++
T Consensus 79 fll-~~~f------~~~~g----------~~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lfln 141 (237)
T COG2908 79 FLL-GKRF------AQEAG----------GMTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLN 141 (237)
T ss_pred HHH-HHHH------HhhcC----------ceEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHH
Confidence 543 2111 11221 1123332222 25789999996421110 011111111
Q ss_pred ccccCCCCCcccccccCCCCCCCCCccCCCCCe---eeeChhhHhhhhhhcCCcEEEeecceeccceEEecCCeEEEEEc
Q 021866 182 RIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAG---YTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFS 258 (306)
Q Consensus 182 r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~g---~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itvfS 258 (306)
.+..+ ...+..-+|+. ..|........ ....++++.+-+++++++.+|+||++.+..-.... ..-|--
T Consensus 142 l~l~~--R~ri~~k~r~~----s~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~---~~yi~l 212 (237)
T COG2908 142 LPLRV--RRRIAYKIRSL----SSWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPG---ITYINL 212 (237)
T ss_pred hHHHH--HHHHHHHHHHh----hHHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCC---ceEEec
Confidence 11000 00011224543 22222211111 12456677788899999999999999877655432 111111
Q ss_pred CCCCcccCCCcEEEEEEcCCCc
Q 021866 259 APNYCYRCGNMAAILEIGENME 280 (306)
Q Consensus 259 a~~y~~~~~n~~avl~i~~~~~ 280 (306)
+. ....+++++++++..
T Consensus 213 Gd-----W~~~~s~~~v~~~~~ 229 (237)
T COG2908 213 GD-----WVSEGSILEVDDGGL 229 (237)
T ss_pred Cc-----chhcceEEEEecCcE
Confidence 11 125789999988744
No 63
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.97 E-value=7.4e-05 Score=62.90 Aligned_cols=47 Identities=21% Similarity=0.301 Sum_probs=30.0
Q ss_pred CCCCeEEEecccccCCCCcH-HHH-HHHHHhhhh---c-CCeEEEeCCCchhh
Q 021866 72 APDTNYLFMGDYVDRGYYSV-ETV-TLLVALKVR---Y-RDRITILRGNHESR 118 (306)
Q Consensus 72 ~~~~~~vfLGD~vDrG~~s~-evl-~ll~~lk~~---~-p~~v~lLrGNHE~~ 118 (306)
.+.+.+|++||++|.+.... +.. .++..++.. . +-.+++++||||..
T Consensus 37 ~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 37 LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 45678999999999876432 222 222333222 1 23699999999974
No 64
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.96 E-value=0.00029 Score=64.05 Aligned_cols=72 Identities=19% Similarity=0.215 Sum_probs=51.5
Q ss_pred CcceeecCCCC------HHHHHHHHHhcCCCCCCeEEEecccccCCCCcHHHHHHHHHhhh--hcCCeEEEeCCCchhhh
Q 021866 48 PVTVCGDIHGQ------FYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKV--RYRDRITILRGNHESRQ 119 (306)
Q Consensus 48 ~i~viGDIHG~------~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~--~~p~~v~lLrGNHE~~~ 119 (306)
+++.|+|+|-. ...+.++++.+...+.+-+|+.||+.+.|. .+-...+..+-. ..|..+++++||||.+.
T Consensus 2 ~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~~ 79 (301)
T COG1409 2 RIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPGNHDARV 79 (301)
T ss_pred eEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCCCCcCCc
Confidence 67899999977 334666777777666789999999999964 222222222222 45667999999999976
Q ss_pred hh
Q 021866 120 IT 121 (306)
Q Consensus 120 ~~ 121 (306)
.+
T Consensus 80 ~~ 81 (301)
T COG1409 80 VN 81 (301)
T ss_pred hH
Confidence 54
No 65
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=97.93 E-value=3e-06 Score=81.70 Aligned_cols=242 Identities=11% Similarity=-0.043 Sum_probs=160.8
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCCceecC----CCcceeecCCCCHHHHHHHHHhcCCCCC-CeEEEecccccCCCCcHHH
Q 021866 19 PLPEAEVKTLCDQARAILVEEWNVQPVK----CPVTVCGDIHGQFYDLIELFRIGGNAPD-TNYLFMGDYVDRGYYSVET 93 (306)
Q Consensus 19 ~~~~~~~~~l~~~~~~il~~ep~~l~~~----~~i~viGDIHG~~~~l~~ll~~~g~~~~-~~~vfLGD~vDrG~~s~ev 93 (306)
.+...++..+++.+.++++.+||..... .-.+.++|.||.+.|+.+.++.- |.. .-|++-|++++++....+.
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~A 91 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKKA 91 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHHH
Confidence 4777888999999999999999877663 24889999999999999888754 433 3488999999999999999
Q ss_pred HHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCChHHHHHHhcCc--hhhHHHHhHhhccCceEEEeCcEEEecCCCCCC-
Q 021866 94 VTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNA--NVWKYFTDLFDYLPLTALIESQIFCLHGGLSPS- 170 (306)
Q Consensus 94 l~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~--~~~~~~~~~f~~LPl~a~i~~~~l~vHgGi~p~- 170 (306)
+..+...+...|+...+.|++||+-.+-..++|..+....++.. .+...+...+.. |+.+...+.++ -+.-++..
T Consensus 92 ~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~~~~~~-~i~~~y~g~~l-e~~kvt~e~ 169 (476)
T KOG0376|consen 92 LLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKIDEEDMD-LIESDYSGPVL-EDHKVTLEF 169 (476)
T ss_pred HHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCcccccccccccccc-ccccccCCccc-ccchhhHHH
Confidence 99999999999999999999999999988888888777666421 122212111111 12322232222 22111100
Q ss_pred -------------------CCCHHHHHhhcccccCC-CCCcccccccCCCCCCCC-CccCCCCCeeeeChhhHhhhhhhc
Q 021866 171 -------------------LDTLDNIRALDRIQEVP-HEGPMCDLLWSDPDDRCG-WGISPRGAGYTFGQDIASQFNHTN 229 (306)
Q Consensus 171 -------------------~~~~~~i~~i~r~~~~~-~~~~~~dllWsdp~~~~~-~~~~~rg~g~~fg~~~~~~fl~~~ 229 (306)
...+++...+.+....+ ....-.+..|+++.+..| |....++.+...++..+..|+.+.
T Consensus 170 vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfng 249 (476)
T KOG0376|consen 170 VKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNG 249 (476)
T ss_pred HHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccC
Confidence 00111111111111111 011345778898876544 555677777777888888999988
Q ss_pred CCcEEEeecceec------------cceEEecC---CeEEEEEcCCCCcc
Q 021866 230 GLSLISRAHQLVM------------EGYNWCQD---KNVVTVFSAPNYCY 264 (306)
Q Consensus 230 ~~~~iirgH~~~~------------~G~~~~~~---~~~itvfSa~~y~~ 264 (306)
+..-+.+.+.-+. .+|...++ +.++++|+.+.++.
T Consensus 250 dfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~ 299 (476)
T KOG0376|consen 250 DFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVK 299 (476)
T ss_pred ceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchh
Confidence 8888888777432 23333322 34788999988874
No 66
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.87 E-value=3.1e-05 Score=70.34 Aligned_cols=73 Identities=22% Similarity=0.209 Sum_probs=49.3
Q ss_pred CCcceeecCCC-C-----------HHHHHHHHHhcCCCCCCeEEEecccccCCCCcHHHH----HHHHHhhhhcCCeEEE
Q 021866 47 CPVTVCGDIHG-Q-----------FYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETV----TLLVALKVRYRDRITI 110 (306)
Q Consensus 47 ~~i~viGDIHG-~-----------~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~evl----~ll~~lk~~~p~~v~l 110 (306)
++++.++|+|- . ...|.++++.+.....+.+++.||++|+...+.+.. .++..|+...|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 46889999993 2 234555555554455778999999999987665443 3444444333346999
Q ss_pred eCCCchhhh
Q 021866 111 LRGNHESRQ 119 (306)
Q Consensus 111 LrGNHE~~~ 119 (306)
+.||||...
T Consensus 81 i~GNHD~~~ 89 (253)
T TIGR00619 81 ISGNHDSAQ 89 (253)
T ss_pred EccCCCChh
Confidence 999999853
No 67
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=97.87 E-value=0.00022 Score=71.15 Aligned_cols=42 Identities=24% Similarity=0.332 Sum_probs=37.2
Q ss_pred CCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhh
Q 021866 74 DTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQI 120 (306)
Q Consensus 74 ~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~ 120 (306)
-+++-.+||+.||||.+-.+++.|+.. + +|=+-.||||--.+
T Consensus 185 VDhLHIvGDIyDRGp~pd~ImD~Lm~~----h-svDIQWGNHDIlWM 226 (640)
T PF06874_consen 185 VDHLHIVGDIYDRGPRPDKIMDRLMNY----H-SVDIQWGNHDILWM 226 (640)
T ss_pred hhheeecccccCCCCChhHHHHHHhcC----C-CccccccchHHHHH
Confidence 577889999999999999999999976 3 78899999999776
No 68
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.85 E-value=0.0002 Score=65.10 Aligned_cols=70 Identities=19% Similarity=0.104 Sum_probs=42.0
Q ss_pred cceeecCCCCHH------HH-HHHHHhcCCCCCCeEEEecccccCCCCc-------H----HHHHHHHHhhhhcCCeEEE
Q 021866 49 VTVCGDIHGQFY------DL-IELFRIGGNAPDTNYLFMGDYVDRGYYS-------V----ETVTLLVALKVRYRDRITI 110 (306)
Q Consensus 49 i~viGDIHG~~~------~l-~~ll~~~g~~~~~~~vfLGD~vDrG~~s-------~----evl~ll~~lk~~~p~~v~l 110 (306)
++.++|+|-... .. ..+++.+...+.+-+|++||++|++... . +.+..+..+....+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 467899995321 12 2344445455567889999999987531 1 1122222222222457899
Q ss_pred eCCCchhh
Q 021866 111 LRGNHESR 118 (306)
Q Consensus 111 LrGNHE~~ 118 (306)
++||||..
T Consensus 82 v~GNHD~~ 89 (256)
T cd07401 82 IRGNHDLF 89 (256)
T ss_pred eCCCCCcC
Confidence 99999995
No 69
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.78 E-value=9.3e-05 Score=63.12 Aligned_cols=58 Identities=16% Similarity=0.121 Sum_probs=34.6
Q ss_pred HHHHHHhcCCCCCCeEEEecccccCCCCcH-HHHHHH-HHhhhhcCCeEEEeCCCchhhh
Q 021866 62 LIELFRIGGNAPDTNYLFMGDYVDRGYYSV-ETVTLL-VALKVRYRDRITILRGNHESRQ 119 (306)
Q Consensus 62 l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~-evl~ll-~~lk~~~p~~v~lLrGNHE~~~ 119 (306)
+.++.+.+...+.+.+|++||++|...... +....+ .......+-.+++++||||...
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccch
Confidence 344444444455688999999998655332 222211 1111223447999999999853
No 70
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.76 E-value=5.5e-05 Score=71.66 Aligned_cols=72 Identities=19% Similarity=0.275 Sum_probs=48.6
Q ss_pred CCcceeecCC-C-----------CHHHHHHHHHhcCCCCCCeEEEecccccCC-CCcHHHHHHHHH--hh--hhcCCeEE
Q 021866 47 CPVTVCGDIH-G-----------QFYDLIELFRIGGNAPDTNYLFMGDYVDRG-YYSVETVTLLVA--LK--VRYRDRIT 109 (306)
Q Consensus 47 ~~i~viGDIH-G-----------~~~~l~~ll~~~g~~~~~~~vfLGD~vDrG-~~s~evl~ll~~--lk--~~~p~~v~ 109 (306)
++++.+||+| | ....|.++++.+.....+.+++.||++|+. +.+.+++.++.. ++ ...+-.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 4688999999 4 123455666655555668899999999985 445555544433 11 12344699
Q ss_pred EeCCCchhh
Q 021866 110 ILRGNHESR 118 (306)
Q Consensus 110 lLrGNHE~~ 118 (306)
++.||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999974
No 71
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.69 E-value=0.00011 Score=64.50 Aligned_cols=69 Identities=20% Similarity=0.177 Sum_probs=39.0
Q ss_pred ceeecCCCC---HHH---HHHHHHhcCCCCCCeEEEecccccCC--C-----Cc-HHHHHHHHHhhhhcCCeEEEeCCCc
Q 021866 50 TVCGDIHGQ---FYD---LIELFRIGGNAPDTNYLFMGDYVDRG--Y-----YS-VETVTLLVALKVRYRDRITILRGNH 115 (306)
Q Consensus 50 ~viGDIHG~---~~~---l~~ll~~~g~~~~~~~vfLGD~vDrG--~-----~s-~evl~ll~~lk~~~p~~v~lLrGNH 115 (306)
++|+|+|-. ... +..+++.....+.+.+|++||++|.- . .. .+.+..++.+. ..+..++++.|||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~~v~GNH 79 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLA-DRGTRVYYVPGNH 79 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHH-HCCCeEEEECCCc
Confidence 589999922 111 22222221114568899999999842 1 11 12223333332 2345799999999
Q ss_pred hhhh
Q 021866 116 ESRQ 119 (306)
Q Consensus 116 E~~~ 119 (306)
|...
T Consensus 80 D~~~ 83 (217)
T cd07398 80 DFLL 83 (217)
T ss_pred hHHH
Confidence 9854
No 72
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.68 E-value=8.3e-05 Score=65.22 Aligned_cols=73 Identities=25% Similarity=0.261 Sum_probs=49.0
Q ss_pred CcceeecCC-CCH--------------HHHHHHHHhcCCCCCCeEEEecccccCCCCcHHHHHHHHHhhhhc---CCeEE
Q 021866 48 PVTVCGDIH-GQF--------------YDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRY---RDRIT 109 (306)
Q Consensus 48 ~i~viGDIH-G~~--------------~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~---p~~v~ 109 (306)
+++.++|+| |.. ..|.++++.+.....+.+|+.||++|....+.+.+..+...-... .-.++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 578899999 321 235666666555566789999999998876655444433332221 34699
Q ss_pred EeCCCchhhhh
Q 021866 110 ILRGNHESRQI 120 (306)
Q Consensus 110 lLrGNHE~~~~ 120 (306)
++.||||....
T Consensus 81 ~~~GNHD~~~~ 91 (223)
T cd00840 81 IIAGNHDSPSR 91 (223)
T ss_pred EecCCCCCccc
Confidence 99999998654
No 73
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.67 E-value=0.00012 Score=66.93 Aligned_cols=71 Identities=15% Similarity=0.201 Sum_probs=45.8
Q ss_pred cceeecCCCCHHHHHHHHHhc---CCCCCCeEEEecccccCCCCc-HHHH----------HHHHHh--hhhcCCeEEEeC
Q 021866 49 VTVCGDIHGQFYDLIELFRIG---GNAPDTNYLFMGDYVDRGYYS-VETV----------TLLVAL--KVRYRDRITILR 112 (306)
Q Consensus 49 i~viGDIHG~~~~l~~ll~~~---g~~~~~~~vfLGD~vDrG~~s-~evl----------~ll~~l--k~~~p~~v~lLr 112 (306)
|+|+||+||+++.+.+.++.. ...+.+-+|++||+-..+..+ .+.+ .+..-+ ....|-.++++.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 689999999999887654432 235677888999996544332 2222 111111 223565689999
Q ss_pred CCchhhh
Q 021866 113 GNHESRQ 119 (306)
Q Consensus 113 GNHE~~~ 119 (306)
||||...
T Consensus 81 GNHE~~~ 87 (262)
T cd00844 81 GNHEASN 87 (262)
T ss_pred CCCCCHH
Confidence 9999743
No 74
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=97.67 E-value=0.00048 Score=60.92 Aligned_cols=218 Identities=13% Similarity=0.138 Sum_probs=96.1
Q ss_pred CCCcceeecCCCCHHHHHHHHHhcCCCCCCeEEEecccccCCCCcHHHH-------------------------HHHHHh
Q 021866 46 KCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETV-------------------------TLLVAL 100 (306)
Q Consensus 46 ~~~i~viGDIHG~~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~evl-------------------------~ll~~l 100 (306)
..+|.+++|.||+++.+.++.+.+.....+-++|+||++-....+.|-. +-++..
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~ 84 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRI 84 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHH
Confidence 3568999999999999999999887777889999999986554443333 222222
Q ss_pred hhhcCCeEEEeCCCchhhhhhhhcCChHHHHH-HhcCchhhHHHHhHhhcc-CceEEEe-CcEEEecCCCCC---CCCCH
Q 021866 101 KVRYRDRITILRGNHESRQITQVYGFYDECLR-KYGNANVWKYFTDLFDYL-PLTALIE-SQIFCLHGGLSP---SLDTL 174 (306)
Q Consensus 101 k~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~-~~~~~~~~~~~~~~f~~L-Pl~a~i~-~~~l~vHgGi~p---~~~~~ 174 (306)
-...+-.+++++||||....- |..+... ++-...+......+|.+- ++. +++ +.-+-.++-..- ..+.+
T Consensus 85 L~~~~~p~~~vPG~~Dap~~~----~lr~a~~~e~v~p~~~~vH~sf~~~~g~y~-v~G~GGeI~~~~~~~~~~LrYP~w 159 (255)
T PF14582_consen 85 LGELGVPVFVVPGNMDAPERF----FLREAYNAEIVTPHIHNVHESFFFWKGEYL-VAGMGGEITDDQREEEFKLRYPAW 159 (255)
T ss_dssp HHCC-SEEEEE--TTS-SHHH----HHHHHHHCCCC-TTEEE-CTCEEEETTTEE-EEEE-SEEESSS-BCSSS-EEEHH
T ss_pred HHhcCCcEEEecCCCCchHHH----HHHHHhccceeccceeeeeeeecccCCcEE-EEecCccccCCCccccccccchHH
Confidence 223344799999999985421 1122111 110000000011111111 011 010 111111111110 01112
Q ss_pred HHHHhhcccccCCCCCcccccccCCCCCCCCCccCCCCCeeeeChhhHhhhhhhcCCcEEEeecceeccceEEecCCeEE
Q 021866 175 DNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVV 254 (306)
Q Consensus 175 ~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~i 254 (306)
+..-.++...+..+... --++..-|. -..|. ..-|+.++..+.++.+-+++++||-....|-+..-+
T Consensus 160 eaey~lk~l~elk~~r~-IlLfhtpPd-------~~kg~-~h~GS~~V~dlIk~~~P~ivl~Ghihe~~~~e~lG~---- 226 (255)
T PF14582_consen 160 EAEYSLKFLRELKDYRK-ILLFHTPPD-------LHKGL-IHVGSAAVRDLIKTYNPDIVLCGHIHESHGKESLGK---- 226 (255)
T ss_dssp HHHHHHGGGGGCTSSEE-EEEESS-BT-------BCTCT-BTTSBHHHHHHHHHH--SEEEE-SSS-EE--EEETT----
T ss_pred HHHHHHHHHHhcccccE-EEEEecCCc-------cCCCc-ccccHHHHHHHHHhcCCcEEEecccccchhhHHhCC----
Confidence 22222332222211110 001222220 11121 235899999999999999999999998777665433
Q ss_pred EEEcCCCCcccCCCcEEEEEEcCCCceEEE
Q 021866 255 TVFSAPNYCYRCGNMAAILEIGENMEQNFL 284 (306)
Q Consensus 255 tvfSa~~y~~~~~n~~avl~i~~~~~~~~~ 284 (306)
|+-.+|+-... ...|++.+..+ ++.+-
T Consensus 227 TlVVNPGsL~~--G~yAvI~l~~~-~v~~g 253 (255)
T PF14582_consen 227 TLVVNPGSLAE--GDYAVIDLEQD-KVEFG 253 (255)
T ss_dssp EEEEE--BGGG--TEEEEEETTTT-EEEEE
T ss_pred EEEecCccccc--CceeEEEeccc-ccccC
Confidence 33345654432 46788888765 45443
No 75
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.66 E-value=0.00016 Score=66.50 Aligned_cols=70 Identities=20% Similarity=0.158 Sum_probs=42.2
Q ss_pred CCcceeecCCCC----HHHHHHHHHhcCCCCCCeEEEecccccCCCCc-----HHHHHHHHHhhhhcCCeEEEeCCCchh
Q 021866 47 CPVTVCGDIHGQ----FYDLIELFRIGGNAPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYRDRITILRGNHES 117 (306)
Q Consensus 47 ~~i~viGDIHG~----~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s-----~evl~ll~~lk~~~p~~v~lLrGNHE~ 117 (306)
-+++++||.|.. ...+.++.+. ..+.+-++++||+++.+... -..+..+..+....| ++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P--~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVP--YMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCC--cEEcCccccc
Confidence 468999999952 2333333332 24456788999999544322 122333333333345 8999999998
Q ss_pred hhh
Q 021866 118 RQI 120 (306)
Q Consensus 118 ~~~ 120 (306)
...
T Consensus 81 ~~~ 83 (294)
T cd00839 81 DYN 83 (294)
T ss_pred ccC
Confidence 643
No 76
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.66 E-value=9e-05 Score=62.99 Aligned_cols=67 Identities=27% Similarity=0.385 Sum_probs=44.0
Q ss_pred cceeecCCCCHHHH---------------HHHHHhcC--CCCCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEe
Q 021866 49 VTVCGDIHGQFYDL---------------IELFRIGG--NAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITIL 111 (306)
Q Consensus 49 i~viGDIHG~~~~l---------------~~ll~~~g--~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lL 111 (306)
+++++|+|=..... .++++... ..+.+.++++||++++|..+.. +.++.++ +..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEE
Confidence 47889998655432 22333221 2356889999999999986543 4444443 3469999
Q ss_pred CCCchhhhh
Q 021866 112 RGNHESRQI 120 (306)
Q Consensus 112 rGNHE~~~~ 120 (306)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999997643
No 77
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=97.55 E-value=0.001 Score=56.82 Aligned_cols=50 Identities=22% Similarity=0.265 Sum_probs=31.9
Q ss_pred CCCCCCeEEEecccccCCCCcH--HHHHHHHHhhhhc--------CCeEEEeCCCchhhh
Q 021866 70 GNAPDTNYLFMGDYVDRGYYSV--ETVTLLVALKVRY--------RDRITILRGNHESRQ 119 (306)
Q Consensus 70 g~~~~~~~vfLGD~vDrG~~s~--evl~ll~~lk~~~--------p~~v~lLrGNHE~~~ 119 (306)
...+.+.+|++||++|.+.... +....+..++..+ +-.+++++||||...
T Consensus 42 ~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 42 QRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred HhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 3455678999999999887532 2222222222211 346999999999853
No 78
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.50 E-value=0.0003 Score=62.89 Aligned_cols=69 Identities=16% Similarity=0.150 Sum_probs=44.0
Q ss_pred CCcceeecCC-CCHHH----------------HHHHHHhcCCCCCCeEEEecccccCCCCc---HHHHHHHHHhhhhcCC
Q 021866 47 CPVTVCGDIH-GQFYD----------------LIELFRIGGNAPDTNYLFMGDYVDRGYYS---VETVTLLVALKVRYRD 106 (306)
Q Consensus 47 ~~i~viGDIH-G~~~~----------------l~~ll~~~g~~~~~~~vfLGD~vDrG~~s---~evl~ll~~lk~~~p~ 106 (306)
.++.+|+|+| |.-.. |.++.+.....+.+.+|++||+.+..... .++..++..+ ..
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~----~~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT----FR 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc----CC
Confidence 6789999999 54222 22333333344568899999999765542 2233344333 23
Q ss_pred eEEEeCCCchhhh
Q 021866 107 RITILRGNHESRQ 119 (306)
Q Consensus 107 ~v~lLrGNHE~~~ 119 (306)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 7999999999753
No 79
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.32 E-value=0.00053 Score=66.38 Aligned_cols=54 Identities=17% Similarity=0.161 Sum_probs=43.1
Q ss_pred CCcceeecCCCC------------HHHHHHHHHhcCCCCCCeEEEecccccCCCCcHHHHHHHHHh
Q 021866 47 CPVTVCGDIHGQ------------FYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVAL 100 (306)
Q Consensus 47 ~~i~viGDIHG~------------~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~evl~ll~~l 100 (306)
.+|..++|+|-. +..|.++++.+.....+-+|+.||++|++.-|.+++..++.+
T Consensus 4 mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~ 69 (405)
T TIGR00583 4 IRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRS 69 (405)
T ss_pred eEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHH
Confidence 578999999943 456778888776667788999999999999998887665553
No 80
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.19 E-value=0.00054 Score=61.67 Aligned_cols=68 Identities=22% Similarity=0.280 Sum_probs=39.6
Q ss_pred ceeecCC--CCH---HHHHHHHHhc-CCC----CCCeEEEecccccCCCC------------c----HHHHHHHHHhhhh
Q 021866 50 TVCGDIH--GQF---YDLIELFRIG-GNA----PDTNYLFMGDYVDRGYY------------S----VETVTLLVALKVR 103 (306)
Q Consensus 50 ~viGDIH--G~~---~~l~~ll~~~-g~~----~~~~~vfLGD~vDrG~~------------s----~evl~ll~~lk~~ 103 (306)
++|+|+| +.. ..+..+++.+ +.. +.+.+|++||++|+... . .++..++.++..
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~- 80 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPS- 80 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhccc-
Confidence 6899999 432 2223444332 221 34788999999997310 0 123334444432
Q ss_pred cCCeEEEeCCCchhhh
Q 021866 104 YRDRITILRGNHESRQ 119 (306)
Q Consensus 104 ~p~~v~lLrGNHE~~~ 119 (306)
.-.|+++.||||...
T Consensus 81 -~~~v~~ipGNHD~~~ 95 (243)
T cd07386 81 -HIKIIIIPGNHDAVR 95 (243)
T ss_pred -CCeEEEeCCCCCccc
Confidence 236999999999753
No 81
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.16 E-value=0.00064 Score=66.01 Aligned_cols=72 Identities=24% Similarity=0.257 Sum_probs=47.2
Q ss_pred CCcceeecCCC-C-H------HH----HHHHHHhcCCCCCCeEEEecccccCCCCcHHHH----HHHHHhhhhcCCeEEE
Q 021866 47 CPVTVCGDIHG-Q-F------YD----LIELFRIGGNAPDTNYLFMGDYVDRGYYSVETV----TLLVALKVRYRDRITI 110 (306)
Q Consensus 47 ~~i~viGDIHG-~-~------~~----l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~evl----~ll~~lk~~~p~~v~l 110 (306)
++++.++|+|- . + .+ +..+++.+.....+.+|+.||++|++..+.+.. .++..++.. +-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~-~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQT-GCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 36889999993 2 1 11 334555555566788999999999986554432 333444432 335999
Q ss_pred eCCCchhhh
Q 021866 111 LRGNHESRQ 119 (306)
Q Consensus 111 LrGNHE~~~ 119 (306)
+.||||...
T Consensus 80 I~GNHD~~~ 88 (407)
T PRK10966 80 LAGNHDSVA 88 (407)
T ss_pred EcCCCCChh
Confidence 999999754
No 82
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=96.97 E-value=0.0014 Score=60.51 Aligned_cols=71 Identities=21% Similarity=0.249 Sum_probs=49.7
Q ss_pred CCcceeecCCCCHHH--HHHHHHhcCCCCCCeEEEecccccC-CCC-cHHHHHHHHHhhhhcCCeEEEeCCCchhhh
Q 021866 47 CPVTVCGDIHGQFYD--LIELFRIGGNAPDTNYLFMGDYVDR-GYY-SVETVTLLVALKVRYRDRITILRGNHESRQ 119 (306)
Q Consensus 47 ~~i~viGDIHG~~~~--l~~ll~~~g~~~~~~~vfLGD~vDr-G~~-s~evl~ll~~lk~~~p~~v~lLrGNHE~~~ 119 (306)
-+|+-++|+|-.... ..+.+........+-+++.|||+|+ .+. ...+...+..|+..+ .++.+.||||...
T Consensus 45 ~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~~~~--gv~av~GNHd~~~ 119 (284)
T COG1408 45 LKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLKAPL--GVFAVLGNHDYGV 119 (284)
T ss_pred eEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhhccC--CEEEEeccccccc
Confidence 469999999987655 2333333333333778899999995 444 555677777776644 5999999998754
No 83
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.96 E-value=0.024 Score=51.68 Aligned_cols=33 Identities=0% Similarity=-0.050 Sum_probs=26.5
Q ss_pred eeChhhHhhhhhhcCCcEEEeecceeccceEEecC
Q 021866 216 TFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQD 250 (306)
Q Consensus 216 ~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~ 250 (306)
+-.++.++..|+..+-.+|+-||.+ ++++..+.
T Consensus 202 ~l~~~~s~~il~~~~P~~vfsGhdH--~~C~~~h~ 234 (257)
T cd08163 202 LLEPSLSEVILKAVQPVIAFSGDDH--DYCEVVHE 234 (257)
T ss_pred ecCHHHHHHHHHhhCCcEEEecCCC--ccceeEcc
Confidence 3567889999999999999999997 46555443
No 84
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.82 E-value=0.0029 Score=52.79 Aligned_cols=43 Identities=23% Similarity=0.355 Sum_probs=31.8
Q ss_pred CCCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhh
Q 021866 72 APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (306)
Q Consensus 72 ~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~ 118 (306)
.|++.+.+|||+.-.--.-.+..+.+-+| |+++++++||||-.
T Consensus 44 ~p~D~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~GNhDk~ 86 (186)
T COG4186 44 GPDDVLWHLGDLSSGANRERAAGLILERL----NGRKHLVPGNHDKC 86 (186)
T ss_pred CccceEEEecccccccchhhHHHHHHHHc----CCcEEEeeCCCCCC
Confidence 56788899999976444444555555555 78999999999974
No 85
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.80 E-value=0.0032 Score=52.72 Aligned_cols=119 Identities=16% Similarity=0.171 Sum_probs=79.7
Q ss_pred ceeecCCCCHHHHHHHHHhcC--CCCCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCCh
Q 021866 50 TVCGDIHGQFYDLIELFRIGG--NAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFY 127 (306)
Q Consensus 50 ~viGDIHG~~~~l~~ll~~~g--~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~ 127 (306)
.|+||+||+++.+.+-++... ..+-+-++++||+..-...+- -+.-.+.=....|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~-~~~~y~~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDE-ELEAYKDGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchh-hHHHHhcCCccCCCCEEEECCCCC-----------
Confidence 489999999999877766532 235567889999997665553 333333334466778999999998
Q ss_pred HHHHHHhcCchhhHHHHhHhhccCceEEEeCcEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCCCCc
Q 021866 128 DECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWG 207 (306)
Q Consensus 128 ~e~~~~~~~~~~~~~~~~~f~~LPl~a~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~~~~ 207 (306)
.-++|++|.=+. .....++. ..+
T Consensus 69 -----------------------------~~DILlTh~wP~-gi~~~~~~-------------------~~~-------- 91 (150)
T cd07380 69 -----------------------------GVDILLTSEWPK-GISKLSKV-------------------PFE-------- 91 (150)
T ss_pred -----------------------------CCCEEECCCCch-hhhhhCCC-------------------ccc--------
Confidence 457999997211 11000111 000
Q ss_pred cCCCCCeeeeChhhHhhhhhhcCCcEEEeeccee
Q 021866 208 ISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLV 241 (306)
Q Consensus 208 ~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~ 241 (306)
+.+..-|...++++++...=++.+.||..+
T Consensus 92 ----~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 92 ----ETLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred ----ccccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 012345889999999999999999999764
No 86
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=96.73 E-value=0.0032 Score=54.94 Aligned_cols=48 Identities=19% Similarity=0.321 Sum_probs=34.9
Q ss_pred CCCCCeEEEecccccCCCCc--HHHHHHHHHhhhhcC----CeEEEeCCCchhh
Q 021866 71 NAPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYR----DRITILRGNHESR 118 (306)
Q Consensus 71 ~~~~~~~vfLGD~vDrG~~s--~evl~ll~~lk~~~p----~~v~lLrGNHE~~ 118 (306)
.-..+-++|+||++|.|+.+ .+....+..++..++ -.++.+.||||.-
T Consensus 40 ~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 40 FVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred ccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 34567899999999999964 336666666654422 3688999999963
No 87
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=96.68 E-value=0.0032 Score=48.54 Aligned_cols=43 Identities=16% Similarity=0.098 Sum_probs=34.9
Q ss_pred CcchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCceec
Q 021866 3 SHGDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQPV 45 (306)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~~ 45 (306)
|.+.++.|+++++.++.|+...+..|+.++.++|+++|+++++
T Consensus 53 t~efv~~mie~FK~~K~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 53 TLEFVKAMIEWFKNQKKLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp -HHHHHHHHHHHHCT----HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred CHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 4567999999999999999999999999999999999999875
No 88
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.41 E-value=0.05 Score=45.12 Aligned_cols=127 Identities=24% Similarity=0.398 Sum_probs=83.1
Q ss_pred cceeecCCC--CHHHHHHHHHhcCCCCC-CeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcC
Q 021866 49 VTVCGDIHG--QFYDLIELFRIGGNAPD-TNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYG 125 (306)
Q Consensus 49 i~viGDIHG--~~~~l~~ll~~~g~~~~-~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~g 125 (306)
+.++||+|= +..+|-.-|++.-.|.+ ++++++|++. |.|++++|..+ .+.++++||--|.-
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l----~~dvhiVrGeFD~~------- 66 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTL----SSDVHIVRGEFDEN------- 66 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhh----CCCcEEEecccCcc-------
Confidence 568999985 33445555655545554 6688999964 68999999887 45899999987652
Q ss_pred ChHHHHHHhcCchhhHHHHhHhhccCceEE--EeC-cEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCC
Q 021866 126 FYDECLRKYGNANVWKYFTDLFDYLPLTAL--IES-QIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDD 202 (306)
Q Consensus 126 f~~e~~~~~~~~~~~~~~~~~f~~LPl~a~--i~~-~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~ 202 (306)
.+| |..-+ ++. ++-|+||-.- +=|.||
T Consensus 67 ------~~y----------------P~~kvvtvGqfkIG~chGhqV--------------------------iP~gd~-- 96 (183)
T KOG3325|consen 67 ------LKY----------------PENKVVTVGQFKIGLCHGHQV--------------------------IPWGDP-- 96 (183)
T ss_pred ------ccC----------------CccceEEeccEEEEeecCcEe--------------------------ecCCCH--
Confidence 122 22222 222 7899998421 235543
Q ss_pred CCCCccCCCCCeeeeChhhHhhhhhhcCCcEEEeecceeccceEEecCCeEEEEEcCCCCc
Q 021866 203 RCGWGISPRGAGYTFGQDIASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYC 263 (306)
Q Consensus 203 ~~~~~~~~rg~g~~fg~~~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itvfSa~~y~ 263 (306)
+++...-+..+++.++-|||+..+.|+. +|+. |..|+-|
T Consensus 97 -----------------~sL~~LaRqldvDILl~G~Th~f~Aye~--eg~f---fvnPGSa 135 (183)
T KOG3325|consen 97 -----------------ESLALLARQLDVDILLTGHTHKFEAYEH--EGKF---FVNPGSA 135 (183)
T ss_pred -----------------HHHHHHHHhcCCcEEEeCCceeEEEEEe--CCcE---EeCCCcc
Confidence 3455556678999999999998777754 4433 4455544
No 89
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.37 E-value=0.0051 Score=55.33 Aligned_cols=66 Identities=29% Similarity=0.350 Sum_probs=43.1
Q ss_pred CcceeecCCCCH---------HHHHHHHHhcCCC-CCCeEEEecccccCCCCcH-----HHHHHHHHhhhhcCCeEEEeC
Q 021866 48 PVTVCGDIHGQF---------YDLIELFRIGGNA-PDTNYLFMGDYVDRGYYSV-----ETVTLLVALKVRYRDRITILR 112 (306)
Q Consensus 48 ~i~viGDIHG~~---------~~l~~ll~~~g~~-~~~~~vfLGD~vDrG~~s~-----evl~ll~~lk~~~p~~v~lLr 112 (306)
+++.++|+||.+ ..+.+++++.... ++.-++..||+++.++.+. .++..+-.+ +-. ++..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~----g~d-~~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNAL----GYD-AVTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhc----CCC-EEee
Confidence 478899999887 4566677665443 3345567999999887643 344444433 223 3456
Q ss_pred CCchhh
Q 021866 113 GNHESR 118 (306)
Q Consensus 113 GNHE~~ 118 (306)
||||.-
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999963
No 90
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.31 E-value=0.01 Score=57.09 Aligned_cols=74 Identities=20% Similarity=0.179 Sum_probs=52.3
Q ss_pred CCcceeecCCCC-------------HHHHHHHHHhcCCCCCCeEEEecccccCCCCcHHHHHHHHHhhh-hc--CCeEEE
Q 021866 47 CPVTVCGDIHGQ-------------FYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKV-RY--RDRITI 110 (306)
Q Consensus 47 ~~i~viGDIHG~-------------~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~-~~--p~~v~l 110 (306)
+|+.-++|.|=- +.+|..+++.+.....+-+|.-||+.|++.-|.+++..+...-. .. .=.|++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 367788888854 33455556666556668889999999999888887666555332 21 125999
Q ss_pred eCCCchhhhh
Q 021866 111 LRGNHESRQI 120 (306)
Q Consensus 111 LrGNHE~~~~ 120 (306)
|.||||...-
T Consensus 81 I~GNHD~~~~ 90 (390)
T COG0420 81 IAGNHDSPSR 90 (390)
T ss_pred ecCCCCchhc
Confidence 9999999754
No 91
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=96.27 E-value=0.048 Score=50.31 Aligned_cols=71 Identities=21% Similarity=0.196 Sum_probs=41.9
Q ss_pred cceeecCCCC---HHHHHHHHHhcCC--CCCCeEEEecccccCCCCcH--H------HHHHHHHhhhhcCC-eEEEeCCC
Q 021866 49 VTVCGDIHGQ---FYDLIELFRIGGN--APDTNYLFMGDYVDRGYYSV--E------TVTLLVALKVRYRD-RITILRGN 114 (306)
Q Consensus 49 i~viGDIHG~---~~~l~~ll~~~g~--~~~~~~vfLGD~vDrG~~s~--e------vl~ll~~lk~~~p~-~v~lLrGN 114 (306)
.--.|+-. | ...+..+++.+.. ++.+-+|+.||+++.+.... + .-.+...++..+|+ .|+.+.||
T Consensus 40 ~~~~G~~~-CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GN 118 (296)
T cd00842 40 AGPWGDYG-CDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGN 118 (296)
T ss_pred CCCCcCcC-CCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCC
Confidence 33455553 3 2345555655433 36677889999998876421 1 12222334444343 69999999
Q ss_pred chhhhh
Q 021866 115 HESRQI 120 (306)
Q Consensus 115 HE~~~~ 120 (306)
||....
T Consensus 119 HD~~p~ 124 (296)
T cd00842 119 HDSYPV 124 (296)
T ss_pred CCCCcc
Confidence 998654
No 92
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=95.95 E-value=0.41 Score=43.66 Aligned_cols=50 Identities=12% Similarity=0.207 Sum_probs=31.8
Q ss_pred cEEEeecceeccceEEec--CCeEEEEEcCCCCcccCCCcEEEEEEc-CCCceEEEEE
Q 021866 232 SLISRAHQLVMEGYNWCQ--DKNVVTVFSAPNYCYRCGNMAAILEIG-ENMEQNFLQF 286 (306)
Q Consensus 232 ~~iirgH~~~~~G~~~~~--~~~~itvfSa~~y~~~~~n~~avl~i~-~~~~~~~~~~ 286 (306)
+..+.||++. -|.+... +++-+.+.|.|.|.. .|.++.++ ++++++.+.|
T Consensus 205 hVyf~Gnq~~-f~t~~~~~~~~~~v~lv~vP~Fs~----t~~~vlvdl~tLe~~~v~f 257 (257)
T cd07387 205 HVYFAGNQPK-FGTKLVEGEEGQRVLLVCVPSFSK----TGTAVLVNLRTLECEPISF 257 (257)
T ss_pred CEEEeCCCcc-eeeeEEEcCCCCeEEEEEeCCcCc----CCEEEEEECCcCcEEEEeC
Confidence 4578899986 3444332 356677888899853 45555554 4577776654
No 93
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=95.90 E-value=0.021 Score=51.06 Aligned_cols=72 Identities=19% Similarity=0.214 Sum_probs=45.2
Q ss_pred cCCCcceeecCCCCHHHHH----------------HHHH-hcCCCCCCeEEEecccccCCCC-----cHHHHHHHHHhhh
Q 021866 45 VKCPVTVCGDIHGQFYDLI----------------ELFR-IGGNAPDTNYLFMGDYVDRGYY-----SVETVTLLVALKV 102 (306)
Q Consensus 45 ~~~~i~viGDIHG~~~~l~----------------~ll~-~~g~~~~~~~vfLGD~vDrG~~-----s~evl~ll~~lk~ 102 (306)
...+..|++|+|=-+.... +.+. .......+++|.+||.-.-.+. ..++-.++-.++.
T Consensus 18 ~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 18 PLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE 97 (235)
T ss_pred ccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhcc
Confidence 3578999999996654422 2222 1223446789999999764433 2334444443432
Q ss_pred hcCCeEEEeCCCchhhh
Q 021866 103 RYRDRITILRGNHESRQ 119 (306)
Q Consensus 103 ~~p~~v~lLrGNHE~~~ 119 (306)
. .+.+++||||...
T Consensus 98 -~--evi~i~GNHD~~i 111 (235)
T COG1407 98 -R--EVIIIRGNHDNGI 111 (235)
T ss_pred -C--cEEEEeccCCCcc
Confidence 2 4999999999854
No 94
>PLN02533 probable purple acid phosphatase
Probab=95.89 E-value=0.0094 Score=58.30 Aligned_cols=71 Identities=17% Similarity=0.185 Sum_probs=42.6
Q ss_pred CCCcceeecCCCCHHHHHHHHHhcCCCCCCeEEEecccccCCCCcH--H-HHHHHHHhhhhcCCeEEEeCCCchhhh
Q 021866 46 KCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSV--E-TVTLLVALKVRYRDRITILRGNHESRQ 119 (306)
Q Consensus 46 ~~~i~viGDIHG~~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~--e-vl~ll~~lk~~~p~~v~lLrGNHE~~~ 119 (306)
+-+++++||+|-. ......++.+.....+-++++||+++.+...- + -..++..+....| ++.+.||||...
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCccccccc
Confidence 4569999999632 22223444443445677889999997654321 1 2223333333445 889999999853
No 95
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.68 E-value=0.029 Score=48.90 Aligned_cols=64 Identities=17% Similarity=0.263 Sum_probs=40.3
Q ss_pred cCCCCHHHHHHHHHhcCC-CCCCeEEEecccccCCCCcHH-HHHHHHHhhhhc---------------------CCeEEE
Q 021866 54 DIHGQFYDLIELFRIGGN-APDTNYLFMGDYVDRGYYSVE-TVTLLVALKVRY---------------------RDRITI 110 (306)
Q Consensus 54 DIHG~~~~l~~ll~~~g~-~~~~~~vfLGD~vDrG~~s~e-vl~ll~~lk~~~---------------------p~~v~l 110 (306)
|++|+=.=|.++++.+.. -..+.++||||++|.|--+-+ -.......+..+ .-.+++
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~ 103 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLIN 103 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEE
Confidence 556665556777765533 456788899999998753322 223333433322 135689
Q ss_pred eCCCchh
Q 021866 111 LRGNHES 117 (306)
Q Consensus 111 LrGNHE~ 117 (306)
|.||||.
T Consensus 104 V~GNHDI 110 (193)
T cd08164 104 IAGNHDV 110 (193)
T ss_pred ECCcccC
Confidence 9999998
No 96
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=95.55 E-value=0.016 Score=53.15 Aligned_cols=65 Identities=20% Similarity=0.255 Sum_probs=38.9
Q ss_pred CcceeecCCCCH----------------HHHHHHHHhcCCCCCCeEEE-ecccccCCCCc-----------HHHHHHHHH
Q 021866 48 PVTVCGDIHGQF----------------YDLIELFRIGGNAPDTNYLF-MGDYVDRGYYS-----------VETVTLLVA 99 (306)
Q Consensus 48 ~i~viGDIHG~~----------------~~l~~ll~~~g~~~~~~~vf-LGD~vDrG~~s-----------~evl~ll~~ 99 (306)
+|+.++|+||++ ..+..+++.......+.+++ .||+++..+.+ ..++..+-.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 467899999986 33556666554333344443 89999866522 224444444
Q ss_pred hhhhcCCeEEEeCCCchh
Q 021866 100 LKVRYRDRITILRGNHES 117 (306)
Q Consensus 100 lk~~~p~~v~lLrGNHE~ 117 (306)
+. + -++..||||.
T Consensus 82 ~g---~--d~~~lGNHe~ 94 (277)
T cd07410 82 LG---Y--DAGTLGNHEF 94 (277)
T ss_pred cC---C--CEEeecccCc
Confidence 42 2 2555699996
No 97
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=95.00 E-value=0.049 Score=49.59 Aligned_cols=69 Identities=20% Similarity=0.211 Sum_probs=39.4
Q ss_pred CcceeecCCCC--H--HHHHHH-HHhcCCCCCCeEEEecccc-cCCCCcH------HHHHHHHH-hhhhcCCeEEEeCCC
Q 021866 48 PVTVCGDIHGQ--F--YDLIEL-FRIGGNAPDTNYLFMGDYV-DRGYYSV------ETVTLLVA-LKVRYRDRITILRGN 114 (306)
Q Consensus 48 ~i~viGDIHG~--~--~~l~~l-l~~~g~~~~~~~vfLGD~v-DrG~~s~------evl~ll~~-lk~~~p~~v~lLrGN 114 (306)
+++++||.=.. . ..+.+. .+.+...+.+-+|++||++ +-|..+. +.+..++. +.. .-.++.+.||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~--~~P~~~v~GN 79 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSL--QVPWYLVLGN 79 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhh--cCCeEEecCC
Confidence 47889998653 2 233333 3333334557788999997 5554221 22222222 211 2349999999
Q ss_pred chhh
Q 021866 115 HESR 118 (306)
Q Consensus 115 HE~~ 118 (306)
||..
T Consensus 80 HD~~ 83 (277)
T cd07378 80 HDYS 83 (277)
T ss_pred cccC
Confidence 9976
No 98
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=94.85 E-value=0.43 Score=46.79 Aligned_cols=53 Identities=13% Similarity=0.114 Sum_probs=36.5
Q ss_pred CcEEEeecceeccceEEecCCeEEEEEcCCCCcccCCCcEEEEEEcCC-CceEEEEEeC
Q 021866 231 LSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGEN-MEQNFLQFDP 288 (306)
Q Consensus 231 ~~~iirgH~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~-~~~~~~~~~~ 288 (306)
-++++.||++. .|+....+.+++..+|-+.+.. .+-++.|+.. +++.+..|..
T Consensus 419 PDv~~~Ghvh~-~g~~~y~gv~~vns~T~q~qTe----fqk~vni~p~~~~v~vv~~~~ 472 (481)
T COG1311 419 PDVFHTGHVHK-FGTGVYEGVNLVNSGTWQEQTE----FQKMVNINPTPGNVPVVDFDS 472 (481)
T ss_pred CcEEEEccccc-cceeEEeccceEEeeeecchhc----cceEEEecCcccceeEEeccc
Confidence 36688999997 7888887878888888876632 3445556553 4555555554
No 99
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=94.45 E-value=0.066 Score=45.89 Aligned_cols=75 Identities=19% Similarity=0.264 Sum_probs=47.4
Q ss_pred CCCCCeEEEecccc--cCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCChHHHHHHhcCchhhHHHHhHhh
Q 021866 71 NAPDTNYLFMGDYV--DRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFD 148 (306)
Q Consensus 71 ~~~~~~~vfLGD~v--DrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~~f~ 148 (306)
..+++.++.-||+- -|=++..+-+.++-+| |+.-+++|||||...-. .......+ ....-..++.|+
T Consensus 41 v~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw~s-----~skl~n~l--p~~l~~~n~~f~ 109 (230)
T COG1768 41 VSPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWWSS-----ISKLNNAL--PPILFYLNNGFE 109 (230)
T ss_pred CChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCccccch-----HHHHHhhc--CchHhhhcccee
Confidence 35577777899984 4556667778888888 99999999999986421 11222222 122334566666
Q ss_pred ccCceEEEe
Q 021866 149 YLPLTALIE 157 (306)
Q Consensus 149 ~LPl~a~i~ 157 (306)
.+-+| +++
T Consensus 110 l~n~a-I~G 117 (230)
T COG1768 110 LLNYA-IVG 117 (230)
T ss_pred EeeEE-EEE
Confidence 66644 444
No 100
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=94.29 E-value=0.065 Score=48.59 Aligned_cols=66 Identities=20% Similarity=0.206 Sum_probs=40.2
Q ss_pred CcceeecCCCCH----------HHHHHHHHhcCCCCCCeEEEecccccCCCCc-----HHHHHHHHHhhhhcCCeEEEeC
Q 021866 48 PVTVCGDIHGQF----------YDLIELFRIGGNAPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYRDRITILR 112 (306)
Q Consensus 48 ~i~viGDIHG~~----------~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s-----~evl~ll~~lk~~~p~~v~lLr 112 (306)
+++-++|+||++ ..+..+++.....++.-++..||.++..+.+ ..++..+-.+ +-.+ +..
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~----g~d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAV----GYDA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhc----CCcE-Ecc
Confidence 467899999975 3455666655433455566799999876643 2233333333 2133 456
Q ss_pred CCchhh
Q 021866 113 GNHESR 118 (306)
Q Consensus 113 GNHE~~ 118 (306)
||||.-
T Consensus 77 GNHefd 82 (257)
T cd07408 77 GNHEFD 82 (257)
T ss_pred cccccc
Confidence 999963
No 101
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=93.55 E-value=0.086 Score=48.74 Aligned_cols=66 Identities=24% Similarity=0.365 Sum_probs=41.2
Q ss_pred CcceeecCCCCHH--------------HHHHHHHhcCC-CCCCeEEEecccccCCCC-c-----HHHHHHHHHhhhhcCC
Q 021866 48 PVTVCGDIHGQFY--------------DLIELFRIGGN-APDTNYLFMGDYVDRGYY-S-----VETVTLLVALKVRYRD 106 (306)
Q Consensus 48 ~i~viGDIHG~~~--------------~l~~ll~~~g~-~~~~~~vfLGD~vDrG~~-s-----~evl~ll~~lk~~~p~ 106 (306)
+|+.+.|+||++. .+..+++.... .++.-++..||++...+. + ..++..+-++..
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~---- 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGV---- 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCC----
Confidence 4678999999854 25566665543 334456679999986654 2 234555555521
Q ss_pred eEEEeCCCchhh
Q 021866 107 RITILRGNHESR 118 (306)
Q Consensus 107 ~v~lLrGNHE~~ 118 (306)
. .+..||||.-
T Consensus 78 D-a~t~GNHefd 88 (288)
T cd07412 78 D-ASAVGNHEFD 88 (288)
T ss_pred e-eeeecccccc
Confidence 3 4556999963
No 102
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=92.65 E-value=0.21 Score=45.49 Aligned_cols=64 Identities=22% Similarity=0.188 Sum_probs=36.7
Q ss_pred cceeecCCCCH----------------------HHHHHHHHhcCCC-CCCeE-EEecccccCCCCc-----HHHHHHHHH
Q 021866 49 VTVCGDIHGQF----------------------YDLIELFRIGGNA-PDTNY-LFMGDYVDRGYYS-----VETVTLLVA 99 (306)
Q Consensus 49 i~viGDIHG~~----------------------~~l~~ll~~~g~~-~~~~~-vfLGD~vDrG~~s-----~evl~ll~~ 99 (306)
++.++|+||++ ..+..++++.... ..+.+ +..||+++..+.+ ..++..+-.
T Consensus 3 il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~~ 82 (264)
T cd07411 3 LLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALNA 82 (264)
T ss_pred EEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHHh
Confidence 56678888874 3344555554333 33444 5699999877643 234444444
Q ss_pred hhhhcCCeEEEeCCCchhh
Q 021866 100 LKVRYRDRITILRGNHESR 118 (306)
Q Consensus 100 lk~~~p~~v~lLrGNHE~~ 118 (306)
+ +-. .+. ||||..
T Consensus 83 ~----g~d-a~~-GNHefd 95 (264)
T cd07411 83 L----GVD-AMV-GHWEFT 95 (264)
T ss_pred h----CCe-EEe-cccccc
Confidence 3 323 333 999963
No 103
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=92.14 E-value=0.3 Score=47.16 Aligned_cols=55 Identities=20% Similarity=0.338 Sum_probs=37.4
Q ss_pred HHHHHhcCC-CCCCeEEEecccccCCCCc--HHHHHHHHHhhhhcCC----eEEEeCCCchh
Q 021866 63 IELFRIGGN-APDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYRD----RITILRGNHES 117 (306)
Q Consensus 63 ~~ll~~~g~-~~~~~~vfLGD~vDrG~~s--~evl~ll~~lk~~~p~----~v~lLrGNHE~ 117 (306)
.+.+....+ -..+-++||||++|-|... -|--.....+|..++. .+..+.||||-
T Consensus 82 rr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 82 RRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred HHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 344444333 3456677999999988863 3445556666666654 78899999997
No 104
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=91.92 E-value=0.42 Score=45.23 Aligned_cols=73 Identities=22% Similarity=0.306 Sum_probs=48.0
Q ss_pred CCcceeecCCCCHHHHH---HHHHhcCCCCCCeEEEeccccc-CCCC---cHHH---------HHHHHHhhhhcCCeEEE
Q 021866 47 CPVTVCGDIHGQFYDLI---ELFRIGGNAPDTNYLFMGDYVD-RGYY---SVET---------VTLLVALKVRYRDRITI 110 (306)
Q Consensus 47 ~~i~viGDIHG~~~~l~---~ll~~~g~~~~~~~vfLGD~vD-rG~~---s~ev---------l~ll~~lk~~~p~~v~l 110 (306)
+||.|=|=-||.++.+- .+.++.|-.+.+-++++||+-. |... ++.| +.--+.-...+|---.+
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 47889999999999887 4455666678888999999942 2211 2211 11111122356656678
Q ss_pred eCCCchhhh
Q 021866 111 LRGNHESRQ 119 (306)
Q Consensus 111 LrGNHE~~~ 119 (306)
+-||||.+.
T Consensus 81 IGGNHEAsn 89 (456)
T KOG2863|consen 81 IGGNHEASN 89 (456)
T ss_pred ecCchHHHH
Confidence 999999865
No 105
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=91.84 E-value=0.011 Score=56.26 Aligned_cols=196 Identities=10% Similarity=-0.099 Sum_probs=112.9
Q ss_pred CCCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCChHHHHHHhc---CchhhHHHHhHhh
Q 021866 72 APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYG---NANVWKYFTDLFD 148 (306)
Q Consensus 72 ~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~---~~~~~~~~~~~f~ 148 (306)
+..-..|+++++.+++..+++.+.+-+..+..+-.+--..++||+.. +++.++....-. ..-+++..++-++
T Consensus 46 ~d~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~-----~~~R~~LVlp~l~S~riyvid~~~ep~~ 120 (476)
T KOG0918|consen 46 PDYLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDS-----SFKRRYLVLPSLNSGRIYVIDVKTEPRK 120 (476)
T ss_pred CcceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCc-----chhhhheeecccccCceEEEEeccCcCc
Confidence 34556889999999999999999999888888777888999999543 223332222111 1235677788888
Q ss_pred ccCceEEEeCcEEEecCCCCCCCCCHHHHHhhcccccCCCCCcccccccCCCCCCC-----CCccCCCCCeeeeChh--h
Q 021866 149 YLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRC-----GWGISPRGAGYTFGQD--I 221 (306)
Q Consensus 149 ~LPl~a~i~~~~l~vHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsdp~~~~-----~~~~~~rg~g~~fg~~--~ 221 (306)
..+...+ .+++++.||+..|.......+..+.-..--..++.. +. |-++.+.. .|... +....||-+ .
T Consensus 121 ~~l~k~i-~~~il~~~~l~~Pht~hcla~g~v~vs~lGd~~gn~-kg-~f~llD~~~~~k~tw~~~--~~~p~~gyDfwy 195 (476)
T KOG0918|consen 121 PSLEKTI-DPDILEKTGLACPHTSHCLASGNVMVSCLGDAEGNA-KG-GFLLLDSDFNEKGTWEKP--GHSPLFGYDFWY 195 (476)
T ss_pred cceeeee-chhhHhhcCCcCCcccccccCCCeeEEeecccccCC-cC-CeEEecCccceecccccC--CCccccccceee
Confidence 8888865 559999999999976543333221111000001100 11 22222111 23221 122222222 1
Q ss_pred HhhhhhhcCCcEEEeecceeccceEEecCCeEEEEEcCCCCcccCCCcEEEEEEcCCC
Q 021866 222 ASQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENM 279 (306)
Q Consensus 222 ~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~itvfSa~~y~~~~~n~~avl~i~~~~ 279 (306)
.-++....+.....+.|.-...+.....++ .+.++.+-|.-..++..+.+.++.++
T Consensus 196 qpr~~~mIstewgap~~~~~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~g 251 (476)
T KOG0918|consen 196 QPRHNVMISTEWGAPNALRKGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDTG 251 (476)
T ss_pred ccccceEEeecccCchhhhcCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCCC
Confidence 223333445555666666543333333344 66777777776677888888888764
No 106
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=91.42 E-value=0.43 Score=43.86 Aligned_cols=66 Identities=20% Similarity=0.261 Sum_probs=37.4
Q ss_pred CcceeecCCCCH---------------------HHHHHHHHhcCCC-CCCeEEEecccccCCCCc-----HHHHHHHHHh
Q 021866 48 PVTVCGDIHGQF---------------------YDLIELFRIGGNA-PDTNYLFMGDYVDRGYYS-----VETVTLLVAL 100 (306)
Q Consensus 48 ~i~viGDIHG~~---------------------~~l~~ll~~~g~~-~~~~~vfLGD~vDrG~~s-----~evl~ll~~l 100 (306)
+++-++|+||++ ..+..+++..... ++.-++..||+++..+.+ ..++..+-.+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 366788999875 3344555554332 333344589999876632 2333333333
Q ss_pred hhhcCCeEEEeCCCchhh
Q 021866 101 KVRYRDRITILRGNHESR 118 (306)
Q Consensus 101 k~~~p~~v~lLrGNHE~~ 118 (306)
. . .+ +..||||.-
T Consensus 82 g---~-D~-~~lGNHefd 94 (281)
T cd07409 82 G---Y-DA-MTLGNHEFD 94 (281)
T ss_pred C---C-CE-EEecccccc
Confidence 2 2 33 445999963
No 107
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=90.45 E-value=0.31 Score=53.62 Aligned_cols=65 Identities=18% Similarity=0.245 Sum_probs=40.6
Q ss_pred CcceeecCCCCH---HHHHHHHHhcCCCCCCeEE-EecccccCCCCc-----HHHHHHHHHhhhhcCCeEEEeCCCchh
Q 021866 48 PVTVCGDIHGQF---YDLIELFRIGGNAPDTNYL-FMGDYVDRGYYS-----VETVTLLVALKVRYRDRITILRGNHES 117 (306)
Q Consensus 48 ~i~viGDIHG~~---~~l~~ll~~~g~~~~~~~v-fLGD~vDrG~~s-----~evl~ll~~lk~~~p~~v~lLrGNHE~ 117 (306)
.|+.++|+||++ ..+..+++.......+.++ ..||+++..+.+ ..++..+-.+. --....||||.
T Consensus 662 ~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg-----~d~~~~GNHEf 735 (1163)
T PRK09419 662 TILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG-----YDASTFGNHEF 735 (1163)
T ss_pred EEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC-----CCEEEeccccc
Confidence 588999999985 3444555544332334444 489999977644 23444444431 23568999997
No 108
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=89.55 E-value=0.62 Score=42.21 Aligned_cols=56 Identities=27% Similarity=0.222 Sum_probs=35.5
Q ss_pred CCHHHHHHHHHhcCCCC-CCeEEEecccccCCCC-----cHHHHHHHHHhhhhcCCeEEEeCCCchh
Q 021866 57 GQFYDLIELFRIGGNAP-DTNYLFMGDYVDRGYY-----SVETVTLLVALKVRYRDRITILRGNHES 117 (306)
Q Consensus 57 G~~~~l~~ll~~~g~~~-~~~~vfLGD~vDrG~~-----s~evl~ll~~lk~~~p~~v~lLrGNHE~ 117 (306)
|.+..+..++++..... +.-++..||+++.++. ...++..+-.+. --+...||||.
T Consensus 21 gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEeeccccc
Confidence 45667777777654433 3356679999987753 234555555442 23567899996
No 109
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=88.19 E-value=0.98 Score=41.39 Aligned_cols=67 Identities=13% Similarity=0.080 Sum_probs=47.4
Q ss_pred CCcceeecCCCC--HHHHHHHHHhcCCC-CCCeEEEecccccCC-CCcHHHHHHHHHhhhhcCCeEEEeCCCchhh
Q 021866 47 CPVTVCGDIHGQ--FYDLIELFRIGGNA-PDTNYLFMGDYVDRG-YYSVETVTLLVALKVRYRDRITILRGNHESR 118 (306)
Q Consensus 47 ~~i~viGDIHG~--~~~l~~ll~~~g~~-~~~~~vfLGD~vDrG-~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~ 118 (306)
++|.++|||=|. ...+...|..+... +.+-+|..||...-| .-+-++...|..+- -.+..+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~G----vDviT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSG----VNYITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcC----CCEEEc-cchhcc
Confidence 478999999999 45566666665443 335556689999766 34678888888773 355555 999974
No 110
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=86.42 E-value=1 Score=39.17 Aligned_cols=72 Identities=11% Similarity=0.138 Sum_probs=40.8
Q ss_pred cceeecCCCC-----HHHHHHHHHhcC-CCCCCeEEEecccccCCCCcH----------HHHHHHHHhhhh-----cCCe
Q 021866 49 VTVCGDIHGQ-----FYDLIELFRIGG-NAPDTNYLFMGDYVDRGYYSV----------ETVTLLVALKVR-----YRDR 107 (306)
Q Consensus 49 i~viGDIHG~-----~~~l~~ll~~~g-~~~~~~~vfLGD~vDrG~~s~----------evl~ll~~lk~~-----~p~~ 107 (306)
|++++|+|=. ++.|.++|+.+. ..+.+.+|++|+++|.-.... .....+..+... ---+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 4677777755 566778888777 666788999999999632221 111122222211 1238
Q ss_pred EEEeCCCchhhhh
Q 021866 108 ITILRGNHESRQI 120 (306)
Q Consensus 108 v~lLrGNHE~~~~ 120 (306)
|++++|+||....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999998654
No 111
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.81 E-value=1.7 Score=42.41 Aligned_cols=69 Identities=20% Similarity=0.335 Sum_probs=52.1
Q ss_pred CCCcceeecCCCCHHHHHHHHHhcCC--CCCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCc
Q 021866 46 KCPVTVCGDIHGQFYDLIELFRIGGN--APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNH 115 (306)
Q Consensus 46 ~~~i~viGDIHG~~~~l~~ll~~~g~--~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNH 115 (306)
+.+|.|+||.-|+++.|.+-+++... .|-+-++++|++.+-...+-|++.+.-.-+ ..|-.++++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~-~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK-KVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc-cCceeEEEecCCC
Confidence 47899999999999998876665543 345778899999997667778877765543 4476778877765
No 112
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=84.40 E-value=5.2 Score=39.32 Aligned_cols=41 Identities=27% Similarity=0.417 Sum_probs=33.4
Q ss_pred CCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhh
Q 021866 74 DTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQ 119 (306)
Q Consensus 74 ~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~ 119 (306)
.+++=.+||+-||||++-.+++-|... + .+-+-.||||-..
T Consensus 191 VDhLHiVGDIyDRGP~pd~Imd~L~~y----h-svDiQWGNHDilW 231 (648)
T COG3855 191 VDHLHIVGDIYDRGPYPDKIMDTLINY----H-SVDIQWGNHDILW 231 (648)
T ss_pred hhheeeecccccCCCCchHHHHHHhhc----c-cccccccCcceEE
Confidence 355668999999999999999988776 3 6778889999743
No 113
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=84.30 E-value=1.1 Score=41.29 Aligned_cols=66 Identities=20% Similarity=0.130 Sum_probs=37.8
Q ss_pred CcceeecCCCCHH-------------HHHHHHHhc----CC-CCCCeEEEecccccCCCCc-------HHHHHHHHHhhh
Q 021866 48 PVTVCGDIHGQFY-------------DLIELFRIG----GN-APDTNYLFMGDYVDRGYYS-------VETVTLLVALKV 102 (306)
Q Consensus 48 ~i~viGDIHG~~~-------------~l~~ll~~~----g~-~~~~~~vfLGD~vDrG~~s-------~evl~ll~~lk~ 102 (306)
.|+-+.|+||++. .+.++.+.. .. .++.-++..||.+...+.+ .-++.++-.+
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~m-- 84 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMM-- 84 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhc--
Confidence 5778899999863 122322221 21 2233445699999865433 2234444444
Q ss_pred hcCCeEEEeCCCchhh
Q 021866 103 RYRDRITILRGNHESR 118 (306)
Q Consensus 103 ~~p~~v~lLrGNHE~~ 118 (306)
+ --.+..||||.-
T Consensus 85 --g-yDa~tlGNHEFd 97 (282)
T cd07407 85 --P-YDLLTIGNHELY 97 (282)
T ss_pred --C-CcEEeecccccC
Confidence 2 357889999984
No 114
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=83.66 E-value=1.3 Score=44.39 Aligned_cols=68 Identities=28% Similarity=0.293 Sum_probs=42.9
Q ss_pred CCCcceeecCCCCHH------------HH---HHHHHhcCCC-CCCeEEEecccccCCCC------cHHHHHHHHHhhhh
Q 021866 46 KCPVTVCGDIHGQFY------------DL---IELFRIGGNA-PDTNYLFMGDYVDRGYY------SVETVTLLVALKVR 103 (306)
Q Consensus 46 ~~~i~viGDIHG~~~------------~l---~~ll~~~g~~-~~~~~vfLGD~vDrG~~------s~evl~ll~~lk~~ 103 (306)
+-+|+-..|+||++. .+ ..++++.... ++.-+|=.||+++..+- ....+.++-.++
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~-- 103 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALG-- 103 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcC--
Confidence 456888999999998 33 3333333222 23334459999998442 344566666663
Q ss_pred cCCeEEEeCCCchhh
Q 021866 104 YRDRITILRGNHESR 118 (306)
Q Consensus 104 ~p~~v~lLrGNHE~~ 118 (306)
-=....||||.-
T Consensus 104 ---yDa~tiGNHEFd 115 (517)
T COG0737 104 ---YDAMTLGNHEFD 115 (517)
T ss_pred ---CcEEeecccccc
Confidence 246788999984
No 115
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=83.12 E-value=13 Score=32.26 Aligned_cols=85 Identities=19% Similarity=0.239 Sum_probs=64.6
Q ss_pred CeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhhhhhhhcCChH----------------HHHHHhcCch
Q 021866 75 TNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYD----------------ECLRKYGNAN 138 (306)
Q Consensus 75 ~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~----------------e~~~~~~~~~ 138 (306)
..+||+| .|-..-|.++++-.++.+|-.+.+ +.|+-|.|..++...|.. |....| ...
T Consensus 40 ~~lVvlG----SGGHT~EMlrLl~~l~~~y~~r~y-I~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~-ltS 113 (211)
T KOG3339|consen 40 STLVVLG----SGGHTGEMLRLLEALQDLYSPRSY-IAADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSW-LTS 113 (211)
T ss_pred eEEEEEc----CCCcHHHHHHHHHHHHhhcCceEE-EEecCchhhHHHHHhhhccccccchhheecchhhhhhhhh-hhh
Confidence 4588888 477899999999999998876654 489999998877555432 333444 345
Q ss_pred hhHHHHhHhhccCceEEEeCcEEEecC
Q 021866 139 VWKYFTDLFDYLPLTALIESQIFCLHG 165 (306)
Q Consensus 139 ~~~~~~~~f~~LPl~a~i~~~~l~vHg 165 (306)
+|..+...+.++++...+-.+++.+-|
T Consensus 114 v~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 114 VFTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHHheEEEecCCCEEEECC
Confidence 778888888888988877778888877
No 116
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=82.12 E-value=3.1 Score=37.85 Aligned_cols=66 Identities=18% Similarity=0.165 Sum_probs=44.0
Q ss_pred CcceeecCCCCHHH--HHHHHHhcCCC-CCCeEEEecccccCCC-CcHHHHHHHHHhhhhcCCeEEEeCCCchhh
Q 021866 48 PVTVCGDIHGQFYD--LIELFRIGGNA-PDTNYLFMGDYVDRGY-YSVETVTLLVALKVRYRDRITILRGNHESR 118 (306)
Q Consensus 48 ~i~viGDIHG~~~~--l~~ll~~~g~~-~~~~~vfLGD~vDrG~-~s~evl~ll~~lk~~~p~~v~lLrGNHE~~ 118 (306)
++.++|||=|.-.. +.+.|...... +.+-++..||..--|. -+.++...|..+.. .+..+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~----D~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGV----DVITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCC----CEEEe-cccccC
Confidence 57899999998643 45555554332 2344556899987663 57778888877733 44545 999863
No 117
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=81.90 E-value=1.7 Score=40.05 Aligned_cols=65 Identities=20% Similarity=0.086 Sum_probs=35.7
Q ss_pred cceeecCCCCHHH----------HHHHHHhcCC-----CCCCeEEEecccccCCCCc-----HHHHHHHHHhhhhcCCeE
Q 021866 49 VTVCGDIHGQFYD----------LIELFRIGGN-----APDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYRDRI 108 (306)
Q Consensus 49 i~viGDIHG~~~~----------l~~ll~~~g~-----~~~~~~vfLGD~vDrG~~s-----~evl~ll~~lk~~~p~~v 108 (306)
|+.+.|+||++.. +..+++.... .++.-++-.||.+...+.+ ..++.++-++.. .+
T Consensus 3 Il~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~----Da 78 (285)
T cd07405 3 ILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGY----DA 78 (285)
T ss_pred EEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCC----cE
Confidence 6778999998532 4444544321 2334455699998433322 233444444421 33
Q ss_pred EEeCCCchhh
Q 021866 109 TILRGNHESR 118 (306)
Q Consensus 109 ~lLrGNHE~~ 118 (306)
...||||.-
T Consensus 79 -~~~GNHEfD 87 (285)
T cd07405 79 -MAVGNHEFD 87 (285)
T ss_pred -Eeecccccc
Confidence 444999963
No 118
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=80.91 E-value=2.3 Score=41.20 Aligned_cols=71 Identities=8% Similarity=-0.009 Sum_probs=41.1
Q ss_pred CCcceeecCCC-CHHHH--HHHHHh-cCCCCCCeEEEecccccCCCCcHH------HHHHHHHhhh-hcCCeEEEeCCCc
Q 021866 47 CPVTVCGDIHG-QFYDL--IELFRI-GGNAPDTNYLFMGDYVDRGYYSVE------TVTLLVALKV-RYRDRITILRGNH 115 (306)
Q Consensus 47 ~~i~viGDIHG-~~~~l--~~ll~~-~g~~~~~~~vfLGD~vDrG~~s~e------vl~ll~~lk~-~~p~~v~lLrGNH 115 (306)
-+++++||-=+ .+... .+.+.. +...+.+-+|-+||-++.|..++. ..+-++.-.. .-.-..++++|||
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNH 106 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQA 106 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCcc
Confidence 46999999643 32221 122222 223455667789999988877653 3344442211 0011489999999
Q ss_pred hh
Q 021866 116 ES 117 (306)
Q Consensus 116 E~ 117 (306)
|.
T Consensus 107 Dy 108 (394)
T PTZ00422 107 DW 108 (394)
T ss_pred cc
Confidence 97
No 119
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=80.67 E-value=2.7 Score=39.43 Aligned_cols=64 Identities=23% Similarity=0.201 Sum_probs=38.9
Q ss_pred cceeecCCCCHH------HHHHHHHhcCC-----CCCCeEEEecccccCCCC-------------cHHHHHHHHHhhhhc
Q 021866 49 VTVCGDIHGQFY------DLIELFRIGGN-----APDTNYLFMGDYVDRGYY-------------SVETVTLLVALKVRY 104 (306)
Q Consensus 49 i~viGDIHG~~~------~l~~ll~~~g~-----~~~~~~vfLGD~vDrG~~-------------s~evl~ll~~lk~~~ 104 (306)
|+-+.|+||++. .+..+++.... .++.-++..||.+.-++. ...++.++-++.
T Consensus 3 IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g--- 79 (313)
T cd08162 3 LLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALG--- 79 (313)
T ss_pred EEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccC---
Confidence 566889999964 34344444321 334455679999875543 334455554553
Q ss_pred CCeEEEeCCCchh
Q 021866 105 RDRITILRGNHES 117 (306)
Q Consensus 105 p~~v~lLrGNHE~ 117 (306)
--.+..||||.
T Consensus 80 --~Da~tlGNHEF 90 (313)
T cd08162 80 --VQAIALGNHEF 90 (313)
T ss_pred --CcEEecccccc
Confidence 34678999996
No 120
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=80.37 E-value=2.2 Score=44.03 Aligned_cols=68 Identities=19% Similarity=0.187 Sum_probs=42.7
Q ss_pred cCCCcceeecCCCCHHH----------------HHHHHHhcCC-CCCCeEEEecccccCCCCcH-------------HHH
Q 021866 45 VKCPVTVCGDIHGQFYD----------------LIELFRIGGN-APDTNYLFMGDYVDRGYYSV-------------ETV 94 (306)
Q Consensus 45 ~~~~i~viGDIHG~~~~----------------l~~ll~~~g~-~~~~~~vfLGD~vDrG~~s~-------------evl 94 (306)
..-+|.-..|+||++.. +..+++++.. .++.-+|-.||.+...+.+- -++
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 45678899999999642 3344444322 23455667999998665431 245
Q ss_pred HHHHHhhhhcCCeEEEeCCCchh
Q 021866 95 TLLVALKVRYRDRITILRGNHES 117 (306)
Q Consensus 95 ~ll~~lk~~~p~~v~lLrGNHE~ 117 (306)
..+-.+. --....||||.
T Consensus 104 ~amN~lg-----yDa~tlGNHEF 121 (649)
T PRK09420 104 KAMNTLD-----YDVGNLGNHEF 121 (649)
T ss_pred HHHHhcC-----CcEEeccchhh
Confidence 5544442 35778999996
No 121
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=79.93 E-value=2.2 Score=43.96 Aligned_cols=66 Identities=18% Similarity=0.161 Sum_probs=39.9
Q ss_pred CCcceeecCCCCHHH----------------HHHHHHhcCC-CCCCeEEEecccccCCCCc-------------HHHHHH
Q 021866 47 CPVTVCGDIHGQFYD----------------LIELFRIGGN-APDTNYLFMGDYVDRGYYS-------------VETVTL 96 (306)
Q Consensus 47 ~~i~viGDIHG~~~~----------------l~~ll~~~g~-~~~~~~vfLGD~vDrG~~s-------------~evl~l 96 (306)
-+|+-..|+||++.. +..++++... .++.-+|-.||.+...+.+ .-++.+
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 357788999999642 3344444322 2344455699999865533 124444
Q ss_pred HHHhhhhcCCeEEEeCCCchh
Q 021866 97 LVALKVRYRDRITILRGNHES 117 (306)
Q Consensus 97 l~~lk~~~p~~v~lLrGNHE~ 117 (306)
+-.+. --....||||.
T Consensus 83 mN~lg-----yDa~tlGNHEF 98 (626)
T TIGR01390 83 MNLLK-----YDVGNLGNHEF 98 (626)
T ss_pred HhhcC-----ccEEecccccc
Confidence 44442 34678899996
No 122
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=79.72 E-value=2.1 Score=47.25 Aligned_cols=66 Identities=21% Similarity=0.260 Sum_probs=39.1
Q ss_pred CCcceeecCCCCHH----------------HHHHHHHhcCCCCCCeEE-EecccccCCCC--------------cHHHHH
Q 021866 47 CPVTVCGDIHGQFY----------------DLIELFRIGGNAPDTNYL-FMGDYVDRGYY--------------SVETVT 95 (306)
Q Consensus 47 ~~i~viGDIHG~~~----------------~l~~ll~~~g~~~~~~~v-fLGD~vDrG~~--------------s~evl~ 95 (306)
-+|...+|+||++. .+..+++.........++ -.||.+...+- ...++.
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~ 121 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIK 121 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHH
Confidence 45899999999863 234455544322223444 49999986652 123344
Q ss_pred HHHHhhhhcCCeEEEeCCCchh
Q 021866 96 LLVALKVRYRDRITILRGNHES 117 (306)
Q Consensus 96 ll~~lk~~~p~~v~lLrGNHE~ 117 (306)
.+-.+ +--....||||.
T Consensus 122 ~mN~l-----gyDa~~lGNHEF 138 (1163)
T PRK09419 122 AMNAL-----GYDAGTLGNHEF 138 (1163)
T ss_pred HHhhc-----CccEEeeccccc
Confidence 44333 234667999997
No 123
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=78.77 E-value=1.2 Score=43.45 Aligned_cols=57 Identities=21% Similarity=0.213 Sum_probs=37.2
Q ss_pred hhhHhhhhhhcCCc----EEEeecceecc--ceEE-ecCCeEEEEEcC--CCCcccCCCcEEEEEE
Q 021866 219 QDIASQFNHTNGLS----LISRAHQLVME--GYNW-CQDKNVVTVFSA--PNYCYRCGNMAAILEI 275 (306)
Q Consensus 219 ~~~~~~fl~~~~~~----~iirgH~~~~~--G~~~-~~~~~~itvfSa--~~y~~~~~n~~avl~i 275 (306)
++...+.|+..|++ .||.||+|+.+ |-.. -++|+++-|... -.|...++=+|-.|..
T Consensus 515 e~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVIDGGFskAYqs~TgiAGYTllY 580 (648)
T COG3855 515 EEICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVIDGGFSKAYQSTTGIAGYTLLY 580 (648)
T ss_pred HHHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEcCchhhhhhcccccceeEeee
Confidence 45677888999887 89999999965 4332 358999888442 2354444334434433
No 124
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=74.72 E-value=8.6 Score=35.65 Aligned_cols=72 Identities=14% Similarity=0.262 Sum_probs=47.9
Q ss_pred CCcceeecCCCC----HHHHHHHHHhcC-CCC----CCeEEEecccccCC----CCc----HHHHHHHHHh-hhhcC---
Q 021866 47 CPVTVCGDIHGQ----FYDLIELFRIGG-NAP----DTNYLFMGDYVDRG----YYS----VETVTLLVAL-KVRYR--- 105 (306)
Q Consensus 47 ~~i~viGDIHG~----~~~l~~ll~~~g-~~~----~~~~vfLGD~vDrG----~~s----~evl~ll~~l-k~~~p--- 105 (306)
..++|+||+|=+ ++.|.++|+.+. ..+ ..-+|++|+++-+. ..+ .+-.+-|..+ ...||
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~ 107 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLIL 107 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHH
Confidence 469999999954 667888888763 222 45689999998653 222 2334444432 33445
Q ss_pred --CeEEEeCCCchhh
Q 021866 106 --DRITILRGNHESR 118 (306)
Q Consensus 106 --~~v~lLrGNHE~~ 118 (306)
.++++++|-.|-.
T Consensus 108 ~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 108 EHCYLIFIPGINDPC 122 (291)
T ss_pred hcCeEEEECCCCCCC
Confidence 4899999999974
No 125
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=72.19 E-value=5.2 Score=42.43 Aligned_cols=66 Identities=20% Similarity=0.153 Sum_probs=40.2
Q ss_pred CCcceeecCCCCHHH----------------HHHHHHhcCC-CCCCeEEEecccccCCCCc--------------HHHHH
Q 021866 47 CPVTVCGDIHGQFYD----------------LIELFRIGGN-APDTNYLFMGDYVDRGYYS--------------VETVT 95 (306)
Q Consensus 47 ~~i~viGDIHG~~~~----------------l~~ll~~~g~-~~~~~~vfLGD~vDrG~~s--------------~evl~ 95 (306)
-+|+-..|+||++.. +..+++.... .++.-+|-.||.+-..+.+ .-++.
T Consensus 116 LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~ 195 (814)
T PRK11907 116 VRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYA 195 (814)
T ss_pred EEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHH
Confidence 468889999999642 2233443322 2344566799999765432 12455
Q ss_pred HHHHhhhhcCCeEEEeCCCchh
Q 021866 96 LLVALKVRYRDRITILRGNHES 117 (306)
Q Consensus 96 ll~~lk~~~p~~v~lLrGNHE~ 117 (306)
++-.|. --....||||+
T Consensus 196 amN~LG-----yDA~tLGNHEF 212 (814)
T PRK11907 196 ALEALG-----FDAGTLGNHEF 212 (814)
T ss_pred HHhccC-----CCEEEechhhc
Confidence 554442 34678899996
No 126
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=70.62 E-value=6.8 Score=37.12 Aligned_cols=48 Identities=19% Similarity=0.231 Sum_probs=29.6
Q ss_pred CCCCCeEEEecccccCCCCcHHHHHHHH---HhhhhcCCeEEEeCCCchhhh
Q 021866 71 NAPDTNYLFMGDYVDRGYYSVETVTLLV---ALKVRYRDRITILRGNHESRQ 119 (306)
Q Consensus 71 ~~~~~~~vfLGD~vDrG~~s~evl~ll~---~lk~~~p~~v~lLrGNHE~~~ 119 (306)
....+-+||+||.|+. .........++ +-.+.+.=....+.||||...
T Consensus 98 sE~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 98 SEKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDES 148 (379)
T ss_pred ccCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhcCCCeEEEeccccccc
Confidence 3456789999999995 44433333332 222223224678999999854
No 127
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=69.13 E-value=12 Score=37.60 Aligned_cols=55 Identities=22% Similarity=0.203 Sum_probs=42.0
Q ss_pred CCcceeecCCC------------CHHHHHHHHHhcCCCCCCeEEEecccccCCCCcHHHHHHHHHhh
Q 021866 47 CPVTVCGDIHG------------QFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALK 101 (306)
Q Consensus 47 ~~i~viGDIHG------------~~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk 101 (306)
.+|.|-.|+|= .|..|..+|+.+.-...+-++.-||++.-..-|..+|--+..+-
T Consensus 14 irILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~lL 80 (646)
T KOG2310|consen 14 IRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLELL 80 (646)
T ss_pred eEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHHHH
Confidence 45888899884 35668888888877777888889999998888877766555443
No 128
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=68.79 E-value=6 Score=40.01 Aligned_cols=68 Identities=21% Similarity=0.125 Sum_probs=37.6
Q ss_pred CCCcceeecCCCCHH----------HHHHHHHhcC-----CCCCCeEEEecccccCCCCc-----HHHHHHHHHhhhhcC
Q 021866 46 KCPVTVCGDIHGQFY----------DLIELFRIGG-----NAPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYR 105 (306)
Q Consensus 46 ~~~i~viGDIHG~~~----------~l~~ll~~~g-----~~~~~~~vfLGD~vDrG~~s-----~evl~ll~~lk~~~p 105 (306)
+-.|+-+.|+||++. .+..+++... ..++.-++..||.+...+.+ .-++.++-.+ +
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~----g 109 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLI----G 109 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcC----C
Confidence 345888999999874 1233343322 13344555699998643322 1233444333 2
Q ss_pred CeEEEeCCCchhh
Q 021866 106 DRITILRGNHESR 118 (306)
Q Consensus 106 ~~v~lLrGNHE~~ 118 (306)
-. ....||||.-
T Consensus 110 ~D-a~tlGNHEFD 121 (551)
T PRK09558 110 YD-AMAVGNHEFD 121 (551)
T ss_pred CC-EEcccccccC
Confidence 23 3445999973
No 129
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=67.22 E-value=6.2 Score=36.25 Aligned_cols=65 Identities=18% Similarity=0.252 Sum_probs=41.1
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCCCCCeEEEecccccCCCCcHHHHHHHHHhhhhcCC-eEEEeCCCchhhh
Q 021866 47 CPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRD-RITILRGNHESRQ 119 (306)
Q Consensus 47 ~~i~viGDIHG~~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~-~v~lLrGNHE~~~ 119 (306)
.+.+.|+|.|+...+.. ..++.+-++-+||+..-|. +-||..+=-.+ -..|. +-+.|+||||...
T Consensus 62 ~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~-gslph~yKIVIaGNHELtF 127 (305)
T KOG3947|consen 62 ARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWL-GSLPHEYKIVIAGNHELTF 127 (305)
T ss_pred eEEEEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHh-ccCcceeeEEEeeccceee
Confidence 46999999998655432 2456666788999977554 34444332221 11232 3468999999854
No 130
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=67.20 E-value=35 Score=33.64 Aligned_cols=33 Identities=6% Similarity=-0.057 Sum_probs=27.3
Q ss_pred hHhhhhhhcCCcEEEeecceeccceEEecCCeE
Q 021866 221 IASQFNHTNGLSLISRAHQLVMEGYNWCQDKNV 253 (306)
Q Consensus 221 ~~~~fl~~~~~~~iirgH~~~~~G~~~~~~~~~ 253 (306)
.+++.+-++++++++-||.+.-+......+.++
T Consensus 323 ~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 323 GLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred HHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 688999999999999999998776665566655
No 131
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=65.52 E-value=8.9 Score=38.82 Aligned_cols=51 Identities=22% Similarity=0.105 Sum_probs=28.8
Q ss_pred HHHHHHhcCC-CCCCeEEEecccccCCCCc-----HHHHHHHHHhhhhcCCeEEEeCCCchh
Q 021866 62 LIELFRIGGN-APDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYRDRITILRGNHES 117 (306)
Q Consensus 62 l~~ll~~~g~-~~~~~~vfLGD~vDrG~~s-----~evl~ll~~lk~~~p~~v~lLrGNHE~ 117 (306)
+..++++... .++.-++..||.+...+.+ ...+.++-++ +--....||||.
T Consensus 37 l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~-----g~Da~~lGNHEF 93 (550)
T TIGR01530 37 LNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAA-----GFDFFTLGNHEF 93 (550)
T ss_pred HHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhcc-----CCCEEEeccccc
Confidence 3344443322 3445566799999765433 2234444334 235788999996
No 132
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=58.24 E-value=12 Score=39.47 Aligned_cols=67 Identities=21% Similarity=0.177 Sum_probs=39.8
Q ss_pred CCCcceeecCCCCHHH----------------HHHHHHhcCC-CCCCeEEEecccccCCCCc------------------
Q 021866 46 KCPVTVCGDIHGQFYD----------------LIELFRIGGN-APDTNYLFMGDYVDRGYYS------------------ 90 (306)
Q Consensus 46 ~~~i~viGDIHG~~~~----------------l~~ll~~~g~-~~~~~~vfLGD~vDrG~~s------------------ 90 (306)
.-+|+-..|+||++.. +..++++... .++.-+|-.||.+-..+.+
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~ 118 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSY 118 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhccccccccccccc
Confidence 4568999999999632 3334443322 2345566799988533321
Q ss_pred -HHHHHHHHHhhhhcCCeEEEeCCCchh
Q 021866 91 -VETVTLLVALKVRYRDRITILRGNHES 117 (306)
Q Consensus 91 -~evl~ll~~lk~~~p~~v~lLrGNHE~ 117 (306)
.-++.++-.|. --....||||.
T Consensus 119 ~~p~i~~mN~lg-----yDa~tlGNHEF 141 (780)
T PRK09418 119 THPLYRLMNLMK-----YDVISLGNHEF 141 (780)
T ss_pred chHHHHHHhccC-----CCEEecccccc
Confidence 23445444442 34678999995
No 133
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=58.02 E-value=56 Score=27.45 Aligned_cols=59 Identities=20% Similarity=0.363 Sum_probs=42.3
Q ss_pred ceeecCCCCHHHHHHHHH-hcCC------------CCCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEe
Q 021866 50 TVCGDIHGQFYDLIELFR-IGGN------------APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITIL 111 (306)
Q Consensus 50 ~viGDIHG~~~~l~~ll~-~~g~------------~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lL 111 (306)
++.+-.+||-..+.+.+. .++. ..+..+||+|=.+|+|.-+-++..+|-.|+ +.+|++.
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~---~KkV~lF 73 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK---GKKVALF 73 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc---CCeEEEE
Confidence 566667788777654443 3332 245679999999999999999999998875 4455543
No 134
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=45.48 E-value=48 Score=24.46 Aligned_cols=69 Identities=14% Similarity=0.046 Sum_probs=46.2
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCC--CCCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCc
Q 021866 47 CPVTVCGDIHGQFYDLIELFRIGGN--APDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNH 115 (306)
Q Consensus 47 ~~i~viGDIHG~~~~l~~ll~~~g~--~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNH 115 (306)
..+.|+=|---|.+.+..+++.+.. +....++.+|+.-|+|..+.+....+-.+...+...+++...|+
T Consensus 12 ~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 12 NGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp TTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred CCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 4567788866677888888776532 34556678999999888888777777777666666655555543
No 135
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=44.51 E-value=36 Score=30.11 Aligned_cols=36 Identities=19% Similarity=0.328 Sum_probs=26.5
Q ss_pred hhhhcCCcEEEeecceeccceEEecCCeEEEEEcCCCC
Q 021866 225 FNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNY 262 (306)
Q Consensus 225 fl~~~~~~~iirgH~~~~~G~~~~~~~~~itvfSa~~y 262 (306)
.+-..|+++||-||+++..+++. .++++| +||-=|+
T Consensus 202 ~l~~~G~D~IiG~H~Hv~q~~E~-~~~~~I-~YSlGNf 237 (239)
T cd07381 202 ALIDAGADLVIGHHPHVLQGIEI-YKGKLI-FYSLGNF 237 (239)
T ss_pred HHHHCCCCEEEcCCCCcCCCeEE-ECCEEE-EEcCCCc
Confidence 33346999999999999999987 455555 5776443
No 136
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=44.50 E-value=19 Score=36.88 Aligned_cols=41 Identities=17% Similarity=0.216 Sum_probs=33.3
Q ss_pred ChhhHhhhhhhcCCc----EEEeecceec--cceEE-ecCCeEEEEEc
Q 021866 218 GQDIASQFNHTNGLS----LISRAHQLVM--EGYNW-CQDKNVVTVFS 258 (306)
Q Consensus 218 g~~~~~~fl~~~~~~----~iirgH~~~~--~G~~~-~~~~~~itvfS 258 (306)
.++..+..|+.+|++ .||-||+||. +|-.. -++||++.|..
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDG 554 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDG 554 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcC
Confidence 456778889999998 9999999996 67654 36899999954
No 137
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=36.79 E-value=57 Score=29.15 Aligned_cols=36 Identities=17% Similarity=0.221 Sum_probs=27.8
Q ss_pred hhhhcCCcEEEeecceeccceEEecCCeEEEEEcCCCC
Q 021866 225 FNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNY 262 (306)
Q Consensus 225 fl~~~~~~~iirgH~~~~~G~~~~~~~~~itvfSa~~y 262 (306)
.+-..|+++||-+|.++..|+++. ++++| +||-=|+
T Consensus 211 ~lidaGaDiIiG~HpHv~q~~E~y-~~~~I-~YSLGNf 246 (250)
T PF09587_consen 211 ALIDAGADIIIGHHPHVIQPVEIY-KGKPI-FYSLGNF 246 (250)
T ss_pred HHHHcCCCEEEeCCCCcccceEEE-CCEEE-EEeCccc
Confidence 334479999999999999999976 55555 6886554
No 138
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=35.06 E-value=12 Score=31.40 Aligned_cols=45 Identities=22% Similarity=0.474 Sum_probs=28.5
Q ss_pred ChhhHhhhhhhcCCc---------EEEeecceeccceEEecCCeEEEEEcCCCCcccCCC
Q 021866 218 GQDIASQFNHTNGLS---------LISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGN 268 (306)
Q Consensus 218 g~~~~~~fl~~~~~~---------~iirgH~~~~~G~~~~~~~~~itvfSa~~y~~~~~n 268 (306)
++...+.||.+.|.+ .=|||+=+++..+.+..+ +.+|.||.+++.
T Consensus 23 ~p~~~~~fC~kCG~~tI~~Cp~C~~~IrG~y~v~gv~~~g~~------~~~PsYC~~CGk 76 (158)
T PF10083_consen 23 NPELREKFCSKCGAKTITSCPNCSTPIRGDYHVEGVFGLGGH------YEAPSYCHNCGK 76 (158)
T ss_pred CchHHHHHHHHhhHHHHHHCcCCCCCCCCceecCCeeeeCCC------CCCChhHHhCCC
Confidence 445566777776544 448898777444433222 669999987654
No 139
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=34.00 E-value=31 Score=31.64 Aligned_cols=39 Identities=26% Similarity=0.443 Sum_probs=25.3
Q ss_pred eEEEecccccCCCCcHH-HHHHHHHhhhhcCCeEEEeCCCchhh
Q 021866 76 NYLFMGDYVDRGYYSVE-TVTLLVALKVRYRDRITILRGNHESR 118 (306)
Q Consensus 76 ~~vfLGD~vDrG~~s~e-vl~ll~~lk~~~p~~v~lLrGNHE~~ 118 (306)
+++|+||+|.+ ...+ +-..|-.+|.+++..+. -.|=|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~v--IaNgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLV--IANGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEE--EEcCccc
Confidence 58999999954 3344 33566678877775544 4466665
No 140
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=33.17 E-value=1.6e+02 Score=23.75 Aligned_cols=60 Identities=17% Similarity=0.153 Sum_probs=40.4
Q ss_pred HHHHHHHHHhcCCCCCCeEEEecccccCCCCc-----HHHHHHHHHhhhhcCCeEEEe---CCCchhh
Q 021866 59 FYDLIELFRIGGNAPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYRDRITIL---RGNHESR 118 (306)
Q Consensus 59 ~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s-----~evl~ll~~lk~~~p~~v~lL---rGNHE~~ 118 (306)
++.|.+.++..+..+...++|+|+-.|++-+| +...-.+..--..+|..++++ -||-+..
T Consensus 12 ~e~~~~~~~~~~n~~~ifvlF~gskd~~tGqSWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG~rp~W 79 (128)
T KOG3425|consen 12 YESFEETLKNVENGKTIFVLFLGSKDDTTGQSWCPDCVAAEPVINEALKHAPEDVHFVHVYVGNRPYW 79 (128)
T ss_pred HHHHHHHHHHHhCCceEEEEEecccCCCCCCcCCchHHHhhHHHHHHHHhCCCceEEEEEEecCCCcc
Confidence 56788888887776666667999999987654 444444444333678877665 5776653
No 141
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=32.83 E-value=68 Score=28.43 Aligned_cols=35 Identities=14% Similarity=0.272 Sum_probs=26.3
Q ss_pred hhhcCCcEEEeecceeccceEEecCCeEEEEEcCCCC
Q 021866 226 NHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNY 262 (306)
Q Consensus 226 l~~~~~~~iirgH~~~~~G~~~~~~~~~itvfSa~~y 262 (306)
+-..|+++||-||+++..+++.. ++++| +||-=|+
T Consensus 201 l~~~G~DvIiG~H~H~~~~~e~~-~~~~I-~YslGNf 235 (239)
T smart00854 201 LIDAGADVVIGHHPHVLQPIEIY-KGKLI-AYSLGNF 235 (239)
T ss_pred HHHcCCCEEEcCCCCcCCceEEE-CCEEE-EEccccc
Confidence 33369999999999999999865 56666 6775444
No 142
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=29.32 E-value=48 Score=30.16 Aligned_cols=40 Identities=30% Similarity=0.350 Sum_probs=26.8
Q ss_pred eEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCchhh
Q 021866 76 NYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESR 118 (306)
Q Consensus 76 ~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~ 118 (306)
+++|+||+|.+.-. .-+...|-++|.+++..+.+. |=|..
T Consensus 1 ~ilfigdi~g~~G~-~~~~~~l~~lk~~~~~D~vi~--NgEn~ 40 (255)
T cd07382 1 KILFIGDIVGKPGR-KAVKEHLPKLKKEYKIDFVIA--NGENA 40 (255)
T ss_pred CEEEEEeCCCHHHH-HHHHHHHHHHHHHCCCCEEEE--CCccc
Confidence 47899999986542 345666777888887555544 54553
No 143
>PF06861 BALF1: BALF1 protein; InterPro: IPR010677 Epstein-Barr virus (strain GD1) (HHV-4), a human tumour DNA virus and a prominent member of gamma-herpesviruses, encodes homologues of cellular antiapoptotic viral Bcl-2 proteins BALF1 and BHRF1. They protect the virus from apoptosis in its host cell during virus synthesis [, ]. The virus infects B lymphocytes to establish a latent infection and yield proliferating, growth-transformed B cells in vitro. Bcl-2 genes are essential for the initial evasion of apoptosis which allows it to establish a latent infection or cause cellular transformation, or both []. Bcl-2 family proteins can inhibit or induce programmed cell death in part by counteracting the activity of other BCL-2 family members. BALF1, inhibits the antiapoptotic activity of EBV BHRF1 and of KSBcl-2 in several transfected cell lines. BALF1 fails, however, to inhibit the cellular BCL-2 family member, BCL-x(L). Thus, BALF1 acts as a negative regulator of the survival function of BHRF1, similar to the counterbalance observed between cellular BCL-2 family members [].
Probab=29.09 E-value=57 Score=27.84 Aligned_cols=82 Identities=20% Similarity=0.177 Sum_probs=56.6
Q ss_pred CHHHHHHHHHHHHHHHhhCCCceecCCCcceeecCCCCHHHHHHHHHhcCCCCCCeEEEecccccCCCCcHHHHHHHHHh
Q 021866 21 PEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVAL 100 (306)
Q Consensus 21 ~~~~~~~l~~~~~~il~~ep~~l~~~~~i~viGDIHG~~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~evl~ll~~l 100 (306)
++..+..|+.+..+ +..-.+.++-......||-|+....++.+++..- +-|.++.+=+.-.+++
T Consensus 54 ~E~lL~~LVk~~iK--k~~~~~~elv~~~~~~~~~h~~iq~l~~iir~~Y--------------~D~~D~~~rL~~tLa~ 117 (182)
T PF06861_consen 54 EEALLCWLVKQSIK--KNFKQLAELVCQPSHNADKHAHIQWLMSIIRAVY--------------RDHYDSWSRLCATLAY 117 (182)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHH--------------hchhhHHHHHHHHHHH
Confidence 34445555555544 3334556676777899999999999999988642 3366777777777777
Q ss_pred hhhcCCeEEEeCCCchhhhh
Q 021866 101 KVRYRDRITILRGNHESRQI 120 (306)
Q Consensus 101 k~~~p~~v~lLrGNHE~~~~ 120 (306)
...|- ++.+.+-||+..+
T Consensus 118 a~~y~--~~~l~~d~e~~s~ 135 (182)
T PF06861_consen 118 ASMYA--MRNLLNDHENASL 135 (182)
T ss_pred HHHHH--HHHhcCchHHHHH
Confidence 66653 5677888888654
No 144
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.64 E-value=38 Score=31.97 Aligned_cols=61 Identities=28% Similarity=0.347 Sum_probs=40.7
Q ss_pred HHHHhhCCCceecCCCcceeecCC-CCHHHHHHHHHhcCCCCCCeEEE-eccccc---CCCCcHHHHHHHHHhhh
Q 021866 33 RAILVEEWNVQPVKCPVTVCGDIH-GQFYDLIELFRIGGNAPDTNYLF-MGDYVD---RGYYSVETVTLLVALKV 102 (306)
Q Consensus 33 ~~il~~ep~~l~~~~~i~viGDIH-G~~~~l~~ll~~~g~~~~~~~vf-LGD~vD---rG~~s~evl~ll~~lk~ 102 (306)
.+-+++-|-.++-.+.++++||.| |||..+.. .+..++| +-|+ | -|+...+++++..+|..
T Consensus 43 y~~~~~~p~~lp~~p~tw~cGD~HLgN~ga~~~--------~~G~V~f~i~DF-De~~~g~~~~DlvRl~~Sl~~ 108 (410)
T COG4320 43 YQDMKTWPWSLPKTPFTWLCGDAHLGNFGAARN--------SKGNVVFKIADF-DEGHLGQYIWDLVRLAVSLVL 108 (410)
T ss_pred HHHHhcCccccCCCCceEEecccccccchhhcc--------CCCceEEEeccc-chhhccchHHHHHHHHHHHHH
Confidence 344566676677678899999999 67665532 2334444 6665 3 36677788888888754
No 145
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=27.06 E-value=2.3e+02 Score=27.72 Aligned_cols=67 Identities=12% Similarity=0.078 Sum_probs=47.6
Q ss_pred CCCcceeecCCC-CHHHHHHHHHhcCCCCCCeEEEecccccCCCCcHHHHHHHHHhhhhc-CCeEEEeCC
Q 021866 46 KCPVTVCGDIHG-QFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRY-RDRITILRG 113 (306)
Q Consensus 46 ~~~i~viGDIHG-~~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~-p~~v~lLrG 113 (306)
...+.||=|-|+ +-+.+.+.|+.+...+..+++.+||+...|+.+.+.-.-+...-... .+.++++ |
T Consensus 324 ~~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~~~-G 392 (453)
T PRK10773 324 AEGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLSV-G 392 (453)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEEEE-C
Confidence 356889999666 57778887776654345678899999999999988877766554433 3555544 6
No 146
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=26.74 E-value=3.9e+02 Score=24.31 Aligned_cols=86 Identities=24% Similarity=0.368 Sum_probs=45.3
Q ss_pred CeEEEeccccc-CCCC---cHHHHHHHHHhhh-------hcCCeEEEeCCCchhhhhhhhcCChHHHHH--HhcCchhhH
Q 021866 75 TNYLFMGDYVD-RGYY---SVETVTLLVALKV-------RYRDRITILRGNHESRQITQVYGFYDECLR--KYGNANVWK 141 (306)
Q Consensus 75 ~~~vfLGD~vD-rG~~---s~evl~ll~~lk~-------~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~--~~~~~~~~~ 141 (306)
+-.+||||-.. |=.. ..-++.+|-++.. +-..+|++|-||||.-. +..| ..-.. +....+.|
T Consensus 86 tpciflgdhtgdrfsti~gd~yiltllnsm~nme~nkdsrinknvvvlagnhein~-ngny---~arlanhkls~gDTY- 160 (318)
T PF13258_consen 86 TPCIFLGDHTGDRFSTIFGDQYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEINF-NGNY---MARLANHKLSAGDTY- 160 (318)
T ss_pred ccceeecCcccchhhhhcchHHHHHHHHHHHhcccccccccccceEEEecCceecc-CchH---HHHHhhCCCCccchh-
Confidence 44677777642 2110 1224455544433 13458999999999743 2222 11111 22222223
Q ss_pred HHHhHhhccCceEEEe-CcEEEecCCCC
Q 021866 142 YFTDLFDYLPLTALIE-SQIFCLHGGLS 168 (306)
Q Consensus 142 ~~~~~f~~LPl~a~i~-~~~l~vHgGi~ 168 (306)
..+..+|++..-. .+++-.|-||-
T Consensus 161 ---nlIKtldVC~YD~erkvltsHHGIi 185 (318)
T PF13258_consen 161 ---NLIKTLDVCNYDPERKVLTSHHGII 185 (318)
T ss_pred ---hccccccccccCcchhhhhcccCce
Confidence 4557788775432 26888888885
No 147
>PLN02965 Probable pheophorbidase
Probab=26.39 E-value=2.1e+02 Score=25.06 Aligned_cols=21 Identities=10% Similarity=-0.059 Sum_probs=16.6
Q ss_pred hhHhhhhhhcCC--cEEEeecce
Q 021866 220 DIASQFNHTNGL--SLISRAHQL 240 (306)
Q Consensus 220 ~~~~~fl~~~~~--~~iirgH~~ 240 (306)
+.+.++++..+. +.++.||+.
T Consensus 59 ~dl~~~l~~l~~~~~~~lvGhSm 81 (255)
T PLN02965 59 RPLFALLSDLPPDHKVILVGHSI 81 (255)
T ss_pred HHHHHHHHhcCCCCCEEEEecCc
Confidence 347788888764 799999996
No 148
>PF12085 DUF3562: Protein of unknown function (DUF3562); InterPro: IPR021945 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 62 to 84 amino acids in length. This protein has two completely conserved residues (A and Y) that may be functionally important.
Probab=24.57 E-value=1.6e+02 Score=21.06 Aligned_cols=43 Identities=19% Similarity=0.247 Sum_probs=36.8
Q ss_pred CCcchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhCCCcee
Q 021866 2 PSHGDLDRQIEHLMECKPLPEAEVKTLCDQARAILVEEWNVQP 44 (306)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~ 44 (306)
|...+.+..|+.+-+....|.+++..++.+...-|..+..|..
T Consensus 1 M~~~~~~e~i~~iA~~t~~P~e~V~~my~dt~~~l~~~ARV~D 43 (66)
T PF12085_consen 1 MAQDNVDEVIRSIAEETGTPAETVRRMYDDTMRELSSGARVHD 43 (66)
T ss_pred CCcccHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHcCCchhh
Confidence 3456788899999888889999999999999999999887654
No 149
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=24.27 E-value=3.1e+02 Score=20.55 Aligned_cols=88 Identities=14% Similarity=0.080 Sum_probs=46.7
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhCCCceecCCC-----cceeecCCCCHHHHHHHHHhcCCCCCCeEEEecccccCCCCc
Q 021866 16 ECKPLPEAEVKTLCDQARAILVEEWNVQPVKCP-----VTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYS 90 (306)
Q Consensus 16 ~~~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~-----i~viGDIHG~~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s 90 (306)
....++.+++.+++++. ....++++..+ --+-|=+|=-+..+...+...+..++..+|+. ...|..|
T Consensus 8 ~~~~i~~~~l~~~~~~~-----~~~~liDvR~~~e~~~ghIpgainip~~~l~~~~~~l~~~~~~~ivv~---C~~G~rs 79 (109)
T cd01533 8 HTPSVSADELAALQARG-----APLVVLDGRRFDEYRKMTIPGSVSCPGAELVLRVGELAPDPRTPIVVN---CAGRTRS 79 (109)
T ss_pred cCCcCCHHHHHHHHhcC-----CCcEEEeCCCHHHHhcCcCCCceeCCHHHHHHHHHhcCCCCCCeEEEE---CCCCchH
Confidence 33456777766655321 12346666432 22334444456666666666555555566665 4567777
Q ss_pred HHHHHHHHHhhhhcCCeEEEeCC
Q 021866 91 VETVTLLVALKVRYRDRITILRG 113 (306)
Q Consensus 91 ~evl~ll~~lk~~~p~~v~lLrG 113 (306)
......|..+ -|++.++.|.|
T Consensus 80 ~~a~~~L~~~--G~~~~v~~l~g 100 (109)
T cd01533 80 IIGAQSLINA--GLPNPVAALRN 100 (109)
T ss_pred HHHHHHHHHC--CCCcceeEecC
Confidence 6666555444 23322666665
No 150
>PF14164 YqzH: YqzH-like protein
Probab=24.17 E-value=1.9e+02 Score=20.50 Aligned_cols=36 Identities=28% Similarity=0.493 Sum_probs=27.7
Q ss_pred hHHHHHHHHh-------cCCCCCHHHHHHHHHHHHHHHhhCCC
Q 021866 6 DLDRQIEHLM-------ECKPLPEAEVKTLCDQARAILVEEWN 41 (306)
Q Consensus 6 ~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~il~~ep~ 41 (306)
.++++|..-+ +.-+++..|...|+......-.++|.
T Consensus 5 ~I~Kmi~~~l~QYg~d~~~~pls~~E~~~L~~~i~~~~~~~~~ 47 (64)
T PF14164_consen 5 LIEKMIINCLRQYGYDVECMPLSDEEWEELCKHIQERKNEEPD 47 (64)
T ss_pred HHHHHHHHHHHHhCCcccCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 3555555554 23479999999999999999999886
No 151
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=22.74 E-value=77 Score=27.09 Aligned_cols=29 Identities=7% Similarity=0.027 Sum_probs=22.2
Q ss_pred ChhhHhhhhhhcCCcEEEeecceeccceE
Q 021866 218 GQDIASQFNHTNGLSLISRAHQLVMEGYN 246 (306)
Q Consensus 218 g~~~~~~fl~~~~~~~iirgH~~~~~G~~ 246 (306)
....+.+.++..+++.+|.||++.+.-..
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 205 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPALHE 205 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCeEE
Confidence 34556677888999999999999865433
No 152
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=22.68 E-value=3.5e+02 Score=26.03 Aligned_cols=69 Identities=19% Similarity=0.208 Sum_probs=45.7
Q ss_pred CCCcceeecCCC-CHHHHHHHHHhcCCCCCCeEEEecccccCCCCcHHHHHHHHHhhhhcC-CeEEEeCCCc
Q 021866 46 KCPVTVCGDIHG-QFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYR-DRITILRGNH 115 (306)
Q Consensus 46 ~~~i~viGDIHG-~~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p-~~v~lLrGNH 115 (306)
...+.+|=|-++ +.+.+.+.|+.+...+..+++.+|+.-.-|..+.+.-..+......+. +.+++. |..
T Consensus 295 ~~~~~vidDsya~np~s~~~al~~l~~~~~r~i~VlG~~~e~G~~~~~~~~~l~~~~~~~~~d~vi~~-g~~ 365 (417)
T TIGR01143 295 KNGLTLIDDTYNANPDSMRAALDALARFPGKKILVLGDMAELGEYSEELHAEVGRYANSLGIDLVFLV-GEE 365 (417)
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEEcCchhcChHHHHHHHHHHHHHHHcCCCEEEEE-CHH
Confidence 356888889654 788888888876543345677899998888887765555554443333 455554 543
No 153
>PRK00485 fumC fumarate hydratase; Reviewed
Probab=22.50 E-value=4.7e+02 Score=25.90 Aligned_cols=88 Identities=10% Similarity=0.023 Sum_probs=55.8
Q ss_pred hcCCCCCHHHHHHHHHHHHHHHhhCC--CceecCCCcceeecCCCCHHHHHHHHHh--cC-CCCCCeEEEecccccCCCC
Q 021866 15 MECKPLPEAEVKTLCDQARAILVEEW--NVQPVKCPVTVCGDIHGQFYDLIELFRI--GG-NAPDTNYLFMGDYVDRGYY 89 (306)
Q Consensus 15 ~~~~~~~~~~~~~l~~~~~~il~~ep--~~l~~~~~i~viGDIHG~~~~l~~ll~~--~g-~~~~~~~vfLGD~vDrG~~ 89 (306)
.+.+.+++++...|.+.+.++....+ .+..-......-.|+|-+...+...+.. .| .....+.+--|++|+.|..
T Consensus 60 ~~~Giip~~~a~~I~~al~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~g~~~~~~~~~h~~~~vh~G~S 139 (464)
T PRK00485 60 AELGLLDAEKADAIVAAADEVIAGKHDDHFPLDVWQTGSGTQSNMNVNEVIANRASELLGGELGSKKPVHPNDHVNMSQS 139 (464)
T ss_pred HHCCCCCHHHHHHHHHHHHHHHhCccccCCCcchhhccccccccccHHHHHHHHHHHhcCccccccCccCccccCCCCCC
Confidence 45578999999999888888765322 1222122344578889988776654432 23 1122444556999999998
Q ss_pred cHHHHHHHHHhhh
Q 021866 90 SVETVTLLVALKV 102 (306)
Q Consensus 90 s~evl~ll~~lk~ 102 (306)
+.+++...+.|..
T Consensus 140 rnD~v~Ta~~L~l 152 (464)
T PRK00485 140 SNDTFPTAMHIAA 152 (464)
T ss_pred chhHHHHHHHHHH
Confidence 8877766665543
No 154
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=22.35 E-value=5.1e+02 Score=22.31 Aligned_cols=77 Identities=21% Similarity=0.264 Sum_probs=54.4
Q ss_pred CCCCHHHHHHHHHHHHHHHhhCCCceecCCCcceeecCCCCHHHHHHHHHhcCCC-------------------------
Q 021866 18 KPLPEAEVKTLCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNA------------------------- 72 (306)
Q Consensus 18 ~~~~~~~~~~l~~~~~~il~~ep~~l~~~~~i~viGDIHG~~~~l~~ll~~~g~~------------------------- 72 (306)
..++++++.+-+.+..+.+.++..= ...++||=++|.+--+-.+++.+..+
T Consensus 10 vLisee~I~~ri~ela~~I~~~y~g----~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i~k 85 (178)
T COG0634 10 VLISEEQIKARIKELAAQITEDYGG----KDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKILK 85 (178)
T ss_pred EeeCHHHHHHHHHHHHHHHHHhhCC----CceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEEec
Confidence 4589999999998888877776432 56788999999987666666654321
Q ss_pred ------CCCeEEEecccccCCCCcHHHHHHHH
Q 021866 73 ------PDTNYLFMGDYVDRGYYSVETVTLLV 98 (306)
Q Consensus 73 ------~~~~~vfLGD~vDrG~~s~evl~ll~ 98 (306)
...+++.+=|++|-|.-=-.+.++|.
T Consensus 86 Dld~di~grdVLiVeDIiDsG~TLs~i~~~l~ 117 (178)
T COG0634 86 DLDEDIKGRDVLIVEDIIDSGLTLSKVRDLLK 117 (178)
T ss_pred ccccCCCCCeEEEEecccccChhHHHHHHHHH
Confidence 13568899999998874444444443
No 155
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=21.23 E-value=1.4e+02 Score=27.22 Aligned_cols=12 Identities=25% Similarity=0.268 Sum_probs=8.1
Q ss_pred CcEEEeecceec
Q 021866 231 LSLISRAHQLVM 242 (306)
Q Consensus 231 ~~~iirgH~~~~ 242 (306)
+..++-.||+++
T Consensus 169 vsavvGTHTHV~ 180 (266)
T COG1692 169 VSAVVGTHTHVP 180 (266)
T ss_pred EEEEEeccCccc
Confidence 456777777765
No 156
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
Probab=20.40 E-value=2.6e+02 Score=27.83 Aligned_cols=95 Identities=22% Similarity=0.334 Sum_probs=62.1
Q ss_pred CCCcchHHHHHHHHhcC------CCCCHHHHHHHHHHHHHHHhhCCCce-ecCCCcceeecCCCCHHHHHHHHHhcCC--
Q 021866 1 MPSHGDLDRQIEHLMEC------KPLPEAEVKTLCDQARAILVEEWNVQ-PVKCPVTVCGDIHGQFYDLIELFRIGGN-- 71 (306)
Q Consensus 1 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~~~il~~ep~~l-~~~~~i~viGDIHG~~~~l~~ll~~~g~-- 71 (306)
||.|.+++..++.++.+ ++++.+.+..++++|.+.-+.....- ....+-.--.++=|+-..+.++.+.++.
T Consensus 82 ~Tg~g~i~~AV~A~k~GA~Dfl~KP~~~~~L~~~v~ral~~~~~~~e~~~~~~~~~~~~~~liG~S~am~~l~~~i~kvA 161 (464)
T COG2204 82 MTGHGDIDTAVEALRLGAFDFLEKPFDLDRLLAIVERALELRELQRENRRSLKRAKSLGGELVGESPAMQQLRRLIAKVA 161 (464)
T ss_pred EeCCCCHHHHHHHHhcCcceeeeCCCCHHHHHHHHHHHHHHhhhhhhhhhhhhccccccCCceecCHHHHHHHHHHHHHh
Confidence 67888999999999877 57999999999999988644432221 2223334455666777777766665443
Q ss_pred CCCCeEEEecccccCCCCcHHHHHHHHH
Q 021866 72 APDTNYLFMGDYVDRGYYSVETVTLLVA 99 (306)
Q Consensus 72 ~~~~~~vfLGD~vDrG~~s~evl~ll~~ 99 (306)
+.+..+++.|.= |. ..|++.....
T Consensus 162 ~s~a~VLI~GES---Gt-GKElvAr~IH 185 (464)
T COG2204 162 PSDASVLITGES---GT-GKELVARAIH 185 (464)
T ss_pred CCCCCEEEECCC---CC-cHHHHHHHHH
Confidence 345667888864 43 4565544433
No 157
>TIGR00550 nadA quinolinate synthetase complex, A subunit. This protein, termed NadA, plays a role in the synthesis of pyridine, a precursor to NAD. The quinolinate synthetase complex consists of A protein (this protein) and B protein. B protein converts L-aspartate to iminoaspartate, an unstable reaction product which in the absence of A protein is spontaneously hydrolyzed to form oxaloacetate. The A protein, NadA, converts iminoaspartate to quinolate.
Probab=20.33 E-value=1.8e+02 Score=27.25 Aligned_cols=36 Identities=17% Similarity=0.170 Sum_probs=28.5
Q ss_pred CCCcceeecCCCCHHHHHHHHHhcCCCCCCeEEEecccc
Q 021866 46 KCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYV 84 (306)
Q Consensus 46 ~~~i~viGDIHG~~~~l~~ll~~~g~~~~~~~vfLGD~v 84 (306)
.+.|..+.|+=|+-..|.++.+.. +.+.+||+||..
T Consensus 28 ~~Evk~~aD~~gdS~~l~~~a~~~---~~~~IvF~gv~f 63 (310)
T TIGR00550 28 KDEIQQIADYTGDSLELAQIAAKT---DADIIVFCGVHF 63 (310)
T ss_pred CHHHHHhhcceeeHHHHHHHHHhC---CCCEEEEeCCch
Confidence 356888999999888888777764 567799999974
No 158
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=20.05 E-value=3.1e+02 Score=22.91 Aligned_cols=67 Identities=12% Similarity=0.063 Sum_probs=45.2
Q ss_pred CCcceeecCCCCHHHHHHHHHhcCCCCCCeEEEecccccCCCCcHHHHHHHHHhhhhcCCeEEEeCCCch
Q 021866 47 CPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHE 116 (306)
Q Consensus 47 ~~i~viGDIHG~~~~l~~ll~~~g~~~~~~~vfLGD~vDrG~~s~evl~ll~~lk~~~p~~v~lLrGNHE 116 (306)
.++.|++. |....+..+++..|....-..++.+|-+.+++-..+++..++..-..-|+++.++ |.+.
T Consensus 109 ~~~~i~Sn--~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~v-gD~~ 175 (198)
T TIGR01428 109 YRLAILSN--GSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLFV-ASNP 175 (198)
T ss_pred CeEEEEeC--CCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEEE-eCCH
Confidence 46888887 5566777888888876555567777777777777787777765544456665544 4443
Done!