BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021867
(306 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1FP2|A Chain A, Crystal Structure Analysis Of Isoflavone
O-Methyltransferase
Length = 352
Score = 285 bits (728), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 149/301 (49%), Positives = 198/301 (65%), Gaps = 10/301 (3%)
Query: 4 IDGEHDTELLEAQAHVWNHIFNFINSMSLKCAVELGIPDIINKHGKPMTLNELVSALTIN 63
I+G +E+ +AQA ++ HI+ FI+SMSLK AVE+ IP+II HGKP++L+ LVS L +
Sbjct: 5 INGRKPSEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVP 64
Query: 64 PSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLLKDNPLSVTPFLQ 123
SK V RLMR L H+GFF T EE+ Y L AS+LL++ + L + P ++
Sbjct: 65 SSKIGNVRRLMRYLAHNGFFEIIT--------KEEESYALTVASELLVRGSDLCLAPMVE 116
Query: 124 AMLDPILLSPWLKLSTWFQNDDPTPFDTLHGKSFWVYAGDEPKINNFFNEAMASDARLAT 183
+LDP L + +L W +D T F G FW + P+ N FN+AMASD++L
Sbjct: 117 CVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKL-I 175
Query: 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLK 243
+ + C VF+GL S+VDVGGG GT AK I + FP L+C FD P VV L S NL
Sbjct: 176 NLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENL-SGSNNLT 234
Query: 244 YVGGDMFEAIPPADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENK 303
YVGGDMF +IP ADAVLLK+ILH+W D++C++ILKKCKEAVT+D K+GKV IIDM+ + K
Sbjct: 235 YVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKK 294
Query: 304 K 304
K
Sbjct: 295 K 295
>pdb|2QYO|A Chain A, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
pdb|2QYO|B Chain B, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
Length = 357
Score = 271 bits (693), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 142/301 (47%), Positives = 193/301 (64%), Gaps = 5/301 (1%)
Query: 4 IDGEHDTELLEAQAHVWNHIFNFINSMSLKCAVELGIPDIINKHGKPMTLNELVSALTIN 63
I+ +E+ +AQA ++ +++ F++SMSLK ++E+ IP+II+ HGKP+TL+ LVS L I
Sbjct: 5 INNRKPSEIFKAQALLYKNMYAFVDSMSLKWSIEMNIPNIIHNHGKPITLSNLVSILQIP 64
Query: 64 PSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLLKDNPLSVTPFLQ 123
+K V RLMR L H+GFF T N EE+ Y L AS+LL+K L + P ++
Sbjct: 65 STKVDNVQRLMRYLAHNGFFEIITNQELEN---EEEAYALTVASELLVKGTELCLAPMVE 121
Query: 124 AMLDPILLSPWLKLSTWFQNDDPTPFDTLHGKSFWVYAGDEPKINNFFNEAMASDARLAT 183
+LDP L + + L W +D T F G W + P+ N +N+A+ASD+++
Sbjct: 122 CVLDPTLSTSFHNLKKWVYEEDLTLFAVNLGCDLWEFLNKNPEYNTLYNDALASDSKM-I 180
Query: 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLK 243
+ + C VFEGL S+VDVGGG GT K I + FP L C FD P VV L NL
Sbjct: 181 NLAMKDCNLVFEGLESIVDVGGGNGTTGKIICETFPKLTCVVFDRPKVVENLCGS-NNLT 239
Query: 244 YVGGDMFEAIPPADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENK 303
YVGGDMF ++P ADAVLLK +LHDW D++C+KILKKCKEAVTSD K+GKVI+IDM+ K
Sbjct: 240 YVGGDMFISVPKADAVLLKAVLHDWTDKDCIKILKKCKEAVTSDGKRGKVIVIDMVINEK 299
Query: 304 K 304
K
Sbjct: 300 K 300
>pdb|1FPX|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Isoflavone O-Methyltransferase
Length = 352
Score = 270 bits (690), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 144/301 (47%), Positives = 192/301 (63%), Gaps = 10/301 (3%)
Query: 4 IDGEHDTELLEAQAHVWNHIFNFINSMSLKCAVELGIPDIINKHGKPMTLNELVSALTIN 63
I+G +E+ +AQA ++ HI+ FI+S SLK AVE IP+II HGKP++L+ LVS L +
Sbjct: 5 INGRKPSEIFKAQALLYKHIYAFIDSXSLKWAVEXNIPNIIQNHGKPISLSNLVSILQVP 64
Query: 64 PSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLLKDNPLSVTPFLQ 123
SK V RL R L H+GFF T EE+ Y L AS+LL++ + L + P ++
Sbjct: 65 SSKIGNVRRLXRYLAHNGFFEIIT--------KEEESYALTVASELLVRGSDLCLAPXVE 116
Query: 124 AMLDPILLSPWLKLSTWFQNDDPTPFDTLHGKSFWVYAGDEPKINNFFNEAMASDARLAT 183
+LDP L + +L W +D T F G FW + P+ N FN+A ASD++L
Sbjct: 117 CVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAXASDSKL-I 175
Query: 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLK 243
+ + C VF+GL S+VDVGGG GT AK I + FP L+C FD P VV L S NL
Sbjct: 176 NLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENL-SGSNNLT 234
Query: 244 YVGGDMFEAIPPADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENK 303
YVGGD F +IP ADAVLLK+ILH+W D++C++ILKKCKEAVT+D K+GKV IID + + K
Sbjct: 235 YVGGDXFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDXVIDKK 294
Query: 304 K 304
K
Sbjct: 295 K 295
>pdb|1ZG3|A Chain A, Crystal Structure Of The Isoflavanone
4'-O-Methyltransferase Complexed With Sah And
2,7,4'-Trihydroxyisoflavanone
Length = 358
Score = 258 bits (659), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 142/296 (47%), Positives = 196/296 (66%), Gaps = 5/296 (1%)
Query: 6 GEHDTELLEAQAHVWNHIFNFINSMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPS 65
G ++EL AQ H++ H++NF++SM+LK A+ELGI D I+ HGKPMTL+EL S+L ++PS
Sbjct: 1 GSEESELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPS 60
Query: 66 KTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLLKDNPLSVTPFLQAM 125
K ++R +R+L H+GFFA+ + + +EE Y L SKLL+ P ++ ++
Sbjct: 61 KVNILHRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGA 120
Query: 126 LDPILLSPWLKLSTWFQND-DPTPFDTLHGKSFWVYAG--DEPKINNFFNEAMASDARLA 182
L P L W WF D + T F+ G+SFW + E + F +AMASD+R+
Sbjct: 121 LHPSSLDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMF 180
Query: 183 TRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANL 242
++V+ + K VFEGL SLVDVGGG G V K I + FP+L+CT FD P VV L + NL
Sbjct: 181 -KLVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGN-ENL 238
Query: 243 KYVGGDMFEAIPPADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDM 298
+VGGDMF++IP ADAVLLKW+LHDWNDE+ +KILK KEA++ K GKVIIID+
Sbjct: 239 NFVGGDMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDI 294
>pdb|1ZGA|A Chain A, Crystal Structure Of Isoflavanone 4'-o-methyltransferase
Complexed With (+)-6a-hydroxymaackiain
pdb|1ZHF|A Chain A, Crystal Structure Of Selenomethionine Substituted
Isoflavanone 4'-O- Methyltransferase
Length = 357
Score = 256 bits (653), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 141/293 (48%), Positives = 195/293 (66%), Gaps = 5/293 (1%)
Query: 9 DTELLEAQAHVWNHIFNFINSMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTR 68
++EL AQ H++ H++NF++SM+LK A+ELGI D I+ HGKPMTL+EL S+L ++PSK
Sbjct: 3 ESELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVN 62
Query: 69 CVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLLKDNPLSVTPFLQAMLDP 128
++R +R+L H+GFFA+ + + +EE Y L SKLL+ P ++ ++ L P
Sbjct: 63 ILHRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHP 122
Query: 129 ILLSPWLKLSTWFQND-DPTPFDTLHGKSFWVYAG--DEPKINNFFNEAMASDARLATRV 185
L W WF D + T F+ G+SFW + E + F +AMASD+R+ ++
Sbjct: 123 SSLDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMF-KL 181
Query: 186 VIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLKYV 245
V+ + K VFEGL SLVDVGGG G V K I + FP+L+CT FD P VV L + NL +V
Sbjct: 182 VLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGN-ENLNFV 240
Query: 246 GGDMFEAIPPADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDM 298
GGDMF++IP ADAVLLKW+LHDWNDE+ +KILK KEA++ K GKVIIID+
Sbjct: 241 GGDMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDI 293
>pdb|1ZGJ|A Chain A, Crystal Structure Of Isoflavanone 4'-O-Methyltransferase
Complexed With (+)-Pisatin
Length = 354
Score = 255 bits (652), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/292 (48%), Positives = 194/292 (66%), Gaps = 5/292 (1%)
Query: 10 TELLEAQAHVWNHIFNFINSMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRC 69
+EL AQ H++ H++NF++SM+LK A+ELGI D I+ HGKPMTL+EL S+L ++PSK
Sbjct: 1 SELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNI 60
Query: 70 VYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLLKDNPLSVTPFLQAMLDPI 129
++R +R+L H+GFFA+ + + +EE Y L SKLL+ P ++ ++ L P
Sbjct: 61 LHRFLRLLTHNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPS 120
Query: 130 LLSPWLKLSTWFQND-DPTPFDTLHGKSFWVYAG--DEPKINNFFNEAMASDARLATRVV 186
L W WF D + T F+ G+SFW + E + F +AMASD+R+ ++V
Sbjct: 121 SLDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMF-KLV 179
Query: 187 IHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLKYVG 246
+ + K VFEGL SLVDVGGG G V K I + FP+L+CT FD P VV L + NL +VG
Sbjct: 180 LQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGN-ENLNFVG 238
Query: 247 GDMFEAIPPADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDM 298
GDMF++IP ADAVLLKW+LHDWNDE+ +KILK KEA++ K GKVIIID+
Sbjct: 239 GDMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDI 290
>pdb|3REO|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3REO|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3REO|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3REO|D Chain D, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|D Chain D, Monolignol O-Methyltransferase (Momt)
Length = 368
Score = 157 bits (398), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 155/277 (55%), Gaps = 17/277 (6%)
Query: 30 MSLKCAVELGIPDIINKHGKP---MTLNELVSAL-TINPSKTRCVYRLMRILIHSGF--F 83
M+LK A+EL + +I+ K P ++ E+ + L T NP + R++R+L +
Sbjct: 36 MALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTY 95
Query: 84 AQQTLNSSRNNNDEEQGYVLKNASKLLLK-DNPLSVTPFLQAMLDPILLSPWLKLSTWFQ 142
+ L S + E+ Y L K L K ++ +S+ PFL D +LL PW L
Sbjct: 96 TLRELPSGK----VERLYGLAPVCKFLTKNEDGVSLAPFLLLATDKVLLEPWFYLKDAIL 151
Query: 143 NDDPTPFDTLHGKSFWVYAGDEPKINNFFNEAMASDARLATRVVIHKCKDVFEGLNSLVD 202
PF+ +G + + Y G + +IN FN+ M+S++ + + ++ + + FEGL ++VD
Sbjct: 152 EGG-IPFNKAYGMNIFDYHGTDHRINKVFNKGMSSNSTITMKKIL-EMYNGFEGLTTIVD 209
Query: 203 VGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLKYVGGDMFEAIPPADAVLLK 262
VGGG G VA I +P++ +FDLPHV+ + + ++++GGDMF+ +P DA+ +K
Sbjct: 210 VGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPA-FSGVEHLGGDMFDGVPKGDAIFIK 268
Query: 263 WILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299
WI HDW+DE C+K+LK C A+ GKVI+ + I
Sbjct: 269 WICHDWSDEHCLKLLKNCYAALPD---HGKVIVAEYI 302
>pdb|1KYW|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|F Chain F, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYZ|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|E Chain E, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
Length = 365
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 150/274 (54%), Gaps = 12/274 (4%)
Query: 30 MSLKCAVELGIPDIINKHGKPMTLN--ELVSAL-TINPSKTRCVYRLMRILIHSGFFAQQ 86
M LK A+EL + +II K G ++ E+ S L T NP + R++R+L + +
Sbjct: 34 MILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVMLDRMLRLL--ACYIILT 91
Query: 87 TLNSSRNNNDEEQGYVLKNASKLLLK-DNPLSVTPFLQAMLDPILLSPWLKLSTWFQNDD 145
++ + ++ Y L +K L+K ++ +S++ D +L+ W L D
Sbjct: 92 CSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVL-DG 150
Query: 146 PTPFDTLHGKSFWVYAGDEPKINNFFNEAMASDARLATRVVIHKCKDVFEGLNSLVDVGG 205
PF+ +G + + Y G +P+ N FN+ M+ + + + ++ FEGL SLVDVGG
Sbjct: 151 GIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTG-FEGLKSLVDVGG 209
Query: 206 GIGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLKYVGGDMFEAIPPADAVLLKWIL 265
G G V I +P ++ +FDLPHV+ S +++VGGDMF +IP ADAV +KWI
Sbjct: 210 GTGAVINTIVSKYPTIKGINFDLPHVIEDAPS-YPGVEHVGGDMFVSIPKADAVFMKWIC 268
Query: 266 HDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299
HDW+DE C+K LK C EA+ + GKVI+ + I
Sbjct: 269 HDWSDEHCLKFLKNCYEALPDN---GKVIVAECI 299
>pdb|3P9C|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Bound To
Sah
pdb|3P9I|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9K|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
Length = 364
Score = 150 bits (379), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 90/274 (32%), Positives = 146/274 (53%), Gaps = 12/274 (4%)
Query: 30 MSLKCAVELGIPDI-INKHGKPMTLNELVSAL--TINPSKTRCVYRLMRILIHSGFFAQQ 86
M+LK A+ELG+ +I + GK +T E+ + L NP V R++R+L + +
Sbjct: 35 MTLKNAIELGLLEILVAAGGKSLTPTEVAAKLPSAANPEAPDMVDRILRLL--ASYNVVT 92
Query: 87 TLNSSRNNNDEEQGYVLKNASKLLL-KDNPLSVTPFLQAMLDPILLSPWLKLSTWFQNDD 145
L + + Y K L ++ +S+ D +L+ W L D
Sbjct: 93 CLVEEGKDGRLSRSYGAAPVCKFLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVL-DG 151
Query: 146 PTPFDTLHGKSFWVYAGDEPKINNFFNEAMASDARLATRVVIHKCKDVFEGLNSLVDVGG 205
PF+ +G S + Y G +P+ N FNE M + + + T+ ++ + FEGL +LVDVGG
Sbjct: 152 GIPFNKAYGMSAFEYHGTDPRFNRVFNEGMKNHSIIITKKLL-ELYHGFEGLGTLVDVGG 210
Query: 206 GIGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLKYVGGDMFEAIPPADAVLLKWIL 265
G+G AIA +P ++ +FDLPHV++ + +VGGDMF+ +P D +L+KWIL
Sbjct: 211 GVGATVAAIAAHYPTIKGVNFDLPHVISE-APQFPGVTHVGGDMFKEVPSGDTILMKWIL 269
Query: 266 HDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299
HDW+D+ C +LK C +A+ + GKV+++ I
Sbjct: 270 HDWSDQHCATLLKNCYDALPA---HGKVVLVQCI 300
>pdb|1FP1|D Chain D, Crystal Structure Analysis Of Chalcone O-Methyltransferase
Length = 372
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 146/280 (52%), Gaps = 10/280 (3%)
Query: 25 NFINSMSLKCAVELGIPDIINKHGKP---MTLNELVSALTINPSKTRCVYRLMRIL-IHS 80
N + L A++L + +II K P M+ +E+ S L + + RL R+L + +
Sbjct: 34 NLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLA 93
Query: 81 GFFAQQTLNSSRNNNDEEQGYVLKNASKLLLKDNPLS-VTPFLQAMLDPILLSPWLKLST 139
+ + + + E+ Y L K L+ D + F + P LL W+
Sbjct: 94 SYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKE 153
Query: 140 WFQNDDPTPFDTLHGKSFWVYAGDEPKINNFFNEAMASDARLATRVVIHKCKDVFEGLNS 199
++D F +HG + + + G + K+N FN++M + ++ + FEG+++
Sbjct: 154 AVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRML-EIYTGFEGIST 212
Query: 200 LVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLKYVGGDMFEAIPPADAV 259
LVDVGGG G + I +P ++ +FDLP V+ L+ +++VGGDMF ++P DA+
Sbjct: 213 LVDVGGGSGRNLELIISKYPLIKGINFDLPQVIEN-APPLSGIEHVGGDMFASVPQGDAM 271
Query: 260 LLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299
+LK + H+W+DE+C++ L C +A++ + GKVII++ I
Sbjct: 272 ILKAVCHNWSDEKCIEFLSNCHKALSPN---GKVIIVEFI 308
>pdb|1FPQ|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Chalcone O- Methyltransferase
Length = 372
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 137/283 (48%), Gaps = 16/283 (5%)
Query: 25 NFINSMSLKCAVELGIPDIINKHGKPMTL---NELVSALTINPSKTRCVYRLMRILIHSG 81
N + L A++L + +II K P +E+ S L P+ T+ R+
Sbjct: 34 NLVYPAVLNAAIDLNLFEIIAKATPPGAFXSPSEIASKL---PASTQHSDLPNRLDRXLR 90
Query: 82 FFAQQTLNSSRNNNDEEQG----YVLKNASKLLLKDNPLS-VTPFLQAMLDPILLSPWLK 136
A ++ +S E+ G Y L K L+ D + F + P LL W
Sbjct: 91 LLASYSVLTSTTRTIEDGGAERVYGLSXVGKYLVPDESRGYLASFTTFLCYPALLQVWXN 150
Query: 137 LSTWFQNDDPTPFDTLHGKSFWVYAGDEPKINNFFNEAMASDARLATRVVIHKCKDVFEG 196
++D F +HG + + + G + K N FN++ + + + FEG
Sbjct: 151 FKEAVVDEDIDLFKNVHGVTKYEFXGKDKKXNQIFNKSXVDVCATEXKRXL-EIYTGFEG 209
Query: 197 LNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLKYVGGDMFEAIPPA 256
+++LVDVGGG G + I +P ++ +FDLP V+ L+ +++VGGD F ++P
Sbjct: 210 ISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIEN-APPLSGIEHVGGDXFASVPQG 268
Query: 257 DAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299
DA +LK + H+W+DE+C++ L C +A++ + GKVII++ I
Sbjct: 269 DAXILKAVCHNWSDEKCIEFLSNCHKALSPN---GKVIIVEFI 308
>pdb|3GWZ|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GXO|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
Length = 369
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 123/285 (43%), Gaps = 43/285 (15%)
Query: 28 NSMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTR------CVYRLMRILIHSG 81
+ ++ AVELG+P+++ + P T L A + R + L H
Sbjct: 51 KARAIHVAVELGVPELLQE--GPRTATALAEATGAHEQTLRRLLRLLATVGVFDDLGHDD 108
Query: 82 FFAQQTLNSSRNNNDEEQGYVLKNASKLLLKD--NPLSVTPFLQAMLDPILLSPWLKLST 139
FAQ L S +LL D +P++ QA P W +L+
Sbjct: 109 LFAQNAL------------------SAVLLPDPASPVATDARFQAA--PWHWRAWEQLTH 148
Query: 140 WFQNDDPTPFDTLHGKSFWVYAGDEPKINNFFNEAMASDARLATRVVIHKCKDVFEGLNS 199
+ + + FD +G SFW ++PK FN A S L + D F G +
Sbjct: 149 SVRTGEAS-FDVANGTSFWQLTHEDPKARELFNRAXGS-VSLTEAGQVAAAYD-FSGAAT 205
Query: 200 LVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLAN------LKYVGGDMFEAI 253
VD+GGG G++ A+ AFP L T + P V L + + GD FE I
Sbjct: 206 AVDIGGGRGSLXAAVLDAFPGLRGTLLERPPVAEEARELLTGRGLADRCEILPGDFFETI 265
Query: 254 P-PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIID 297
P AD L+K +LHDW+D++ V+IL++ A D ++++ID
Sbjct: 266 PDGADVYLIKHVLHDWDDDDVVRILRRIATAXKPDS---RLLVID 307
>pdb|1X19|A Chain A, Crystal Structure Of Bchu Involved In Bacteriochlorophyll
C Biosynthesis
pdb|1X1A|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Methionine
pdb|1X1B|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine
pdb|1X1C|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn2+
pdb|1X1D|A Chain A, Crystal Structure Of Bchu Complexed With
S-Adenosyl-L-Homocysteine And Zn-Bacteriopheophorbide D
Length = 359
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 82/139 (58%), Gaps = 12/139 (8%)
Query: 168 NNFFNEAMASDARLATRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFD 227
N +F E S+A+ A ++++ + K +G+ ++DVGGGIG ++ A+ K FP L+ T +
Sbjct: 164 NLYFEEIHRSNAKFAIQLLLEEAK--LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILN 221
Query: 228 LPHVV-----NGLESDLAN-LKYVGGDMF-EAIPPADAVLLKWILHDWNDEECVKILKKC 280
LP + N E +A+ ++ + D++ E+ P ADAVL IL+ N++ + KK
Sbjct: 222 LPGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEADAVLFCRILYSANEQLSTIMCKKA 281
Query: 281 KEAVTSDDKKGKVIIIDMI 299
+A+ S G+++I+DM+
Sbjct: 282 FDAMRSG---GRLLILDMV 297
>pdb|3LST|A Chain A, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
pdb|3LST|B Chain B, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
Length = 348
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 10/203 (4%)
Query: 101 YVLKNASKLLLKDNPLSVTPFLQAMLDPILLSPWLKLSTWFQNDDPTPFDTLHGKSFWVY 160
+ L + L D+P+ + D + ++++ + P F + G S Y
Sbjct: 92 FALTDKGAALRSDSPVPARAGILXFTDTXFWTXSHRVASALGPERPA-FADIFGSSLDAY 150
Query: 161 AGDEPKINNFFNEAMASDARLATRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPN 220
+ ++ + E + A +++ + D F ++ DVGGG G + + P
Sbjct: 151 FDGDAEVEALYYEGXET-VSAAEHLILARAGD-FPATGTVADVGGGRGGFLLTVLREHPG 208
Query: 221 LECTDFDLPHVVNGLESDLANL----KYVGGDMFEAIPPADAVLLKWILHDWNDEECVKI 276
L+ D VV D ++ K V GD +P AD +LK ILH+W DE+ V+I
Sbjct: 209 LQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREVPHADVHVLKRILHNWGDEDSVRI 268
Query: 277 LKKCKEAVTSDDKKGKVIIIDMI 299
L C+ + G+V++ID +
Sbjct: 269 LTNCRRVXPA---HGRVLVIDAV 288
>pdb|2IP2|A Chain A, Structure Of The Pyocyanin Biosynthetic Protein Phzm
pdb|2IP2|B Chain B, Structure Of The Pyocyanin Biosynthetic Protein Phzm
Length = 334
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 115/278 (41%), Gaps = 36/278 (12%)
Query: 29 SMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTL 88
S + A LG+ D+I + +E ++A S ++RLMR+L+ F
Sbjct: 22 SRCVYVATRLGLADLIESG---IDSDETLAAAV--GSDAERIHRLMRLLVAFEIF----- 71
Query: 89 NSSRNNNDEEQGYVLKNASKLLLKDNPLSVTPFLQAMLDPILLSPWLKLSTWFQNDDPTP 148
D GY + LL+D S + + W + P
Sbjct: 72 -----QGDTRDGYA-NTPTSHLLRDVEGSFRDMVL-FYGEEFHAAWTPACEALLSGTPG- 123
Query: 149 FDTLHGKSFWVYAGDEPKINNFFNEAMASDARLATRVVIHKCKDV--FEGLNSLVDVGGG 206
F+ G+ F+ Y P F AM A+ + H+ + F G S VDVGGG
Sbjct: 124 FELAFGEDFYSYLKRCPDAGRRFLLAMK-----ASNLAFHEIPRLLDFRG-RSFVDVGGG 177
Query: 207 IGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANL------KYVGGDMFEAIPP-ADAV 259
G + KAI +A P+ D + +L++L VGGDM + +P D
Sbjct: 178 SGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIY 237
Query: 260 LLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIID 297
LL I+ D ++ +++L C+EA+ D G+V++I+
Sbjct: 238 LLSRIIGDLDEAASLRLLGNCREAMAGD---GRVVVIE 272
>pdb|4A6D|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam
pdb|4A6E|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam And
N-Acetylserotonin
Length = 353
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 17/117 (14%)
Query: 200 LVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLA-----NLKYVGGDMF-EAI 253
+ D+GGG G +AK +P + T FD+P VV + + + + GD F + +
Sbjct: 183 MCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDPL 242
Query: 254 PPADAVLLKWILHDWNDEECVKILKK----CKEAVTSDDKKGKVIIIDMIRENKKRG 306
P AD +L +LHDW D +C +L++ CK G +++I+ + + +RG
Sbjct: 243 PEADLYILARVLHDWADGKCSHLLERIYHTCKPG-------GGILVIESLLDEDRRG 292
>pdb|1QZZ|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Methionine (Sam)
pdb|1R00|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Homocystein (Sah)
Length = 374
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 16/154 (10%)
Query: 153 HGKSFWVYAGDEPKINNFFNEAMASDARLATRVVIHKCKDVFE--GLNSLVDVGGGIGTV 210
+G+ FW + + + F+ M+ D LA D ++ + ++DVGGG G +
Sbjct: 141 YGRPFWEDLSADVALADSFDALMSCDEDLA----YEAPADAYDWSAVRHVLDVGGGNGGM 196
Query: 211 AKAIAKAFPNLECTDFDLPHVVNGLESDLAN------LKYVGGDMFEAIP-PADAVLLKW 263
AIA P+L T +L A+ + GD F+ +P AD VLL +
Sbjct: 197 LAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSF 256
Query: 264 ILHDWNDEECVKILKKCKEAVTSDDKKGKVIIID 297
+L +W+DE+ + IL+ C A+ + G+++++D
Sbjct: 257 VLLNWSDEDALTILRGCVRAL---EPGGRLLVLD 287
>pdb|1TW2|A Chain A, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW2|B Chain B, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW3|A Chain A, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
pdb|1TW3|B Chain B, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
Length = 360
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 28/241 (11%)
Query: 65 SKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLLKDNPLSVTP---F 121
++ + RL+R L+ G D +V +LL D+P +
Sbjct: 64 TRPEALLRLIRHLVAIGLL----------EEDAPGEFVPTEVGELLADDHPAAQRAWHDL 113
Query: 122 LQAMLDPILLSPWLKLSTWFQNDDPTPFDTLHGKSFWVYAGDEPKINNFFNEAMASDARL 181
QA+ + + +L + PT +++++GK F+ P + F+ +A D +
Sbjct: 114 TQAVARADI--SFTRLPDAIRTGRPT-YESIYGKPFYEDLAGRPDLRASFDSLLACDQDV 170
Query: 182 ATRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLAN 241
A + + ++DVGGG G A AIA+ P++ T ++ V+ S L +
Sbjct: 171 AFDAPAAAYD--WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKD 228
Query: 242 ------LKYVGGDMFEAIP-PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVI 294
+ V GD FE +P ADA++L ++L +W D + V+IL +C EA+ + G+++
Sbjct: 229 EGLSDRVDVVEGDFFEPLPRKADAIILSFVLLNWPDHDAVRILTRCAEAL---EPGGRIL 285
Query: 295 I 295
I
Sbjct: 286 I 286
>pdb|1XDS|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDS|B Chain B, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDU|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With Sinefungin (Sfg)
Length = 374
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 16/154 (10%)
Query: 153 HGKSFWVYAGDEPKINNFFNEAMASDARLATRVVIHKCKDVFE--GLNSLVDVGGGIGTV 210
+G+ FW + + + F+ + D LA D ++ + ++DVGGG G
Sbjct: 141 YGRPFWEDLSADVALADSFDALXSCDEDLA----YEAPADAYDWSAVRHVLDVGGGNGGX 196
Query: 211 AKAIAKAFPNLECTDFDLPHVVNGLESDLAN------LKYVGGDMFEAIP-PADAVLLKW 263
AIA P+L T +L A+ + GD F+ +P AD VLL +
Sbjct: 197 LAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSF 256
Query: 264 ILHDWNDEECVKILKKCKEAVTSDDKKGKVIIID 297
+L +W+DE+ + IL+ C A+ + G+++++D
Sbjct: 257 VLLNWSDEDALTILRGCVRAL---EPGGRLLVLD 287
>pdb|3I53|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I53|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I58|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I58|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I5U|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I5U|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I64|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
pdb|3I64|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
Length = 332
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 243 KYVGGDMFEAIPP-ADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRE 301
+ V G F+ +P A +L +LHDW+D V IL++C EA S G V++I+ +
Sbjct: 222 QVVVGSFFDPLPAGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGS---GGVVLVIEAVAG 278
Query: 302 NKKRG 306
++ G
Sbjct: 279 DEHAG 283
>pdb|2R3S|A Chain A, Crystal Structure Of A Putative O-methyltransferase
(npun_r0239) From Nostoc Punctiforme Pcc 73102 At 2.15 A
Resolution
pdb|2R3S|B Chain B, Crystal Structure Of A Putative O-methyltransferase
(npun_r0239) From Nostoc Punctiforme Pcc 73102 At 2.15 A
Resolution
Length = 335
Score = 34.7 bits (78), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 11/108 (10%)
Query: 200 LVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVN------GLESDLANLKYVGGDMFEAI 253
++D+ G A+A+ PN E D V+ ++ + + G FE
Sbjct: 169 VLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVD 228
Query: 254 PP--ADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299
D VLL LH ++ C ++L+K K A+ + GKVI+ D I
Sbjct: 229 YGNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVE---GKVIVFDFI 273
>pdb|3DP7|A Chain A, Crystal Structure Of Sam-Dependent Methyltransferase From
Bacteroides Vulgatus Atcc 8482
pdb|3DP7|B Chain B, Crystal Structure Of Sam-Dependent Methyltransferase From
Bacteroides Vulgatus Atcc 8482
Length = 363
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 13/115 (11%)
Query: 200 LVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLKYV------GGDMFEAI 253
L+D+GG G A + +E T DLP + + A L G ++ +
Sbjct: 183 LLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANLLDRD 242
Query: 254 PP----ADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENKK 304
P DAV + L +++EE + IL + +++ D KV I++ + + ++
Sbjct: 243 VPFPTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDS---KVYIMETLWDRQR 294
>pdb|1XTP|A Chain A, Structural Analysis Of Leishmania Major Lmaj004091aaa, A
Sam-dependent Methyltransferase Of The Duf858/pfam05891
Family
Length = 254
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
Query: 196 GLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLP--HVVNGLESDLANL---KYVGGDMF 250
G + +D G GIG + K + TD P H + + +LA K++
Sbjct: 93 GTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHXLEEAKRELAGXPVGKFILASXE 150
Query: 251 EA-IPP--ADAVLLKWILHDWNDEECVKILKKCKEAVT 285
A +PP D ++++W D + VK K C++A+T
Sbjct: 151 TATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALT 188
>pdb|1AJ0|A Chain A, Crystal Structure Of A Ternary Complex Of E. Coli
Dihydropteroate Synthase
pdb|1AJ2|A Chain A, Crystal Structure Of A Binary Complex Of E. Coli
Dihydropteroate Synthase
pdb|1AJZ|A Chain A, Structure Of Dihydropteroate Pyrophosphorylase
Length = 282
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 11 ELLEAQAHVWNHIFNFINSMS----LKCAVELGIPD-IINKHGKPMTLNE 55
E++ A V HI N I S+S L+ A E G+P +++ G P T+ E
Sbjct: 101 EVIRESAKVGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQE 150
>pdb|3MGG|A Chain A, Crystal Structure Of Methyl Transferase From
Methanosarcina Mazei
pdb|3MGG|B Chain B, Crystal Structure Of Methyl Transferase From
Methanosarcina Mazei
Length = 276
Score = 27.7 bits (60), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 12/91 (13%)
Query: 200 LVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVV-----NGLESDLANLKYVGGDMFEAI 253
+++ G GIG +AK P+ E T D+ P + N ++ + N+K++ ++F ++
Sbjct: 41 VLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIF-SL 99
Query: 254 PPADA----VLLKWIL-HDWNDEECVKILKK 279
P D+ + + ++L H + EE +K LKK
Sbjct: 100 PFEDSSFDHIFVCFVLEHLQSPEEALKSLKK 130
>pdb|4GTW|A Chain A, Crystal Structure Of Mouse Enpp1 In Complex With Amp
pdb|4GTW|B Chain B, Crystal Structure Of Mouse Enpp1 In Complex With Amp
Length = 823
Score = 27.7 bits (60), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 35/74 (47%)
Query: 13 LEAQAHVWNHIFNFINSMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYR 72
LE+ A++ H + I S + + +++ H +T EL++ L+ + V
Sbjct: 749 LESSAYILPHRPDNIESCTHGKRESSWVEELLTLHRARVTDVELITGLSFYQDRQESVSE 808
Query: 73 LMRILIHSGFFAQQ 86
L+R+ H F+Q+
Sbjct: 809 LLRLKTHLPIFSQE 822
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,262,758
Number of Sequences: 62578
Number of extensions: 377588
Number of successful extensions: 907
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 846
Number of HSP's gapped (non-prelim): 31
length of query: 306
length of database: 14,973,337
effective HSP length: 98
effective length of query: 208
effective length of database: 8,840,693
effective search space: 1838864144
effective search space used: 1838864144
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)