Query 021867
Match_columns 306
No_of_seqs 203 out of 1792
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 10:30:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021867.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021867hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a6d_A Hydroxyindole O-methylt 100.0 1.9E-50 6.5E-55 371.6 27.6 276 14-306 7-292 (353)
2 3p9c_A Caffeic acid O-methyltr 100.0 2.4E-47 8.2E-52 352.3 27.6 287 8-304 13-305 (364)
3 1fp2_A Isoflavone O-methyltran 100.0 1.2E-46 4E-51 346.2 25.3 292 2-304 3-295 (352)
4 3lst_A CALO1 methyltransferase 100.0 4.4E-46 1.5E-50 341.9 27.9 273 9-303 16-292 (348)
5 3reo_A (ISO)eugenol O-methyltr 100.0 4.8E-46 1.7E-50 344.1 26.3 284 11-304 17-307 (368)
6 3gwz_A MMCR; methyltransferase 100.0 2.6E-45 8.9E-50 339.4 27.4 272 12-304 35-314 (369)
7 1zg3_A Isoflavanone 4'-O-methy 100.0 2.5E-45 8.6E-50 338.1 25.5 294 8-304 3-300 (358)
8 3i53_A O-methyltransferase; CO 100.0 2.4E-45 8.1E-50 334.9 21.0 267 16-303 6-280 (332)
9 1fp1_D Isoliquiritigenin 2'-O- 100.0 5.3E-44 1.8E-48 330.9 26.1 287 9-304 16-313 (372)
10 2ip2_A Probable phenazine-spec 100.0 8.2E-44 2.8E-48 324.8 25.9 266 14-304 7-279 (334)
11 3dp7_A SAM-dependent methyltra 100.0 4.6E-43 1.6E-47 323.6 25.0 272 7-304 7-294 (363)
12 1qzz_A RDMB, aclacinomycin-10- 100.0 2.5E-41 8.4E-46 312.9 20.8 271 12-303 13-295 (374)
13 1x19_A CRTF-related protein; m 100.0 3.6E-40 1.2E-44 303.8 27.0 262 9-303 24-301 (359)
14 1tw3_A COMT, carminomycin 4-O- 100.0 1.1E-40 3.7E-45 307.1 22.4 267 16-303 20-295 (360)
15 3mcz_A O-methyltransferase; ad 100.0 4.9E-40 1.7E-44 301.8 25.6 266 9-305 18-295 (352)
16 2r3s_A Uncharacterized protein 100.0 8.6E-40 2.9E-44 298.0 23.2 263 16-304 7-278 (335)
17 4gek_A TRNA (CMO5U34)-methyltr 99.7 6.2E-17 2.1E-21 142.1 15.1 107 194-303 68-184 (261)
18 2qm3_A Predicted methyltransfe 99.7 1.5E-15 5.1E-20 140.1 16.0 216 39-300 47-280 (373)
19 3dtn_A Putative methyltransfer 99.7 1.6E-15 5.4E-20 130.3 14.9 106 195-303 43-154 (234)
20 2qe6_A Uncharacterized protein 99.6 2.6E-14 9E-19 126.2 15.6 102 196-300 77-199 (274)
21 1vl5_A Unknown conserved prote 99.6 1.5E-14 5.1E-19 126.4 11.7 111 183-302 26-145 (260)
22 3ou2_A SAM-dependent methyltra 99.6 4.7E-14 1.6E-18 119.4 14.0 103 194-301 44-150 (218)
23 3ujc_A Phosphoethanolamine N-m 99.6 2.2E-14 7.4E-19 125.2 12.1 113 184-302 45-164 (266)
24 3hnr_A Probable methyltransfer 99.6 3.8E-14 1.3E-18 120.4 13.3 111 185-302 36-150 (220)
25 1ve3_A Hypothetical protein PH 99.5 1.4E-14 4.8E-19 123.5 9.9 100 195-299 37-144 (227)
26 1xtp_A LMAJ004091AAA; SGPP, st 99.5 2E-14 6.9E-19 124.7 10.0 112 184-301 83-201 (254)
27 3jwh_A HEN1; methyltransferase 99.5 5.1E-14 1.8E-18 119.6 11.8 102 194-298 27-142 (217)
28 3jwg_A HEN1, methyltransferase 99.5 4.7E-14 1.6E-18 119.9 11.5 100 195-297 28-141 (219)
29 3dlc_A Putative S-adenosyl-L-m 99.5 4E-14 1.4E-18 119.7 11.0 97 198-300 45-151 (219)
30 2o57_A Putative sarcosine dime 99.5 7.8E-14 2.7E-18 124.1 13.2 103 194-302 80-192 (297)
31 1nkv_A Hypothetical protein YJ 99.5 7.3E-14 2.5E-18 121.4 12.2 111 184-302 26-145 (256)
32 1kpg_A CFA synthase;, cyclopro 99.5 1.2E-13 4E-18 122.3 13.7 113 184-302 54-173 (287)
33 1pjz_A Thiopurine S-methyltran 99.5 7.5E-14 2.6E-18 117.7 11.7 101 194-299 20-142 (203)
34 3dh0_A SAM dependent methyltra 99.5 6.3E-14 2.2E-18 119.0 11.4 113 184-303 27-149 (219)
35 3bus_A REBM, methyltransferase 99.5 1.2E-13 4E-18 121.3 13.2 111 184-302 51-171 (273)
36 3pfg_A N-methyltransferase; N, 99.5 1.2E-13 4.2E-18 120.7 12.6 103 194-301 48-155 (263)
37 1xxl_A YCGJ protein; structura 99.5 1.4E-13 4.9E-18 118.8 12.1 110 184-302 11-129 (239)
38 3hem_A Cyclopropane-fatty-acyl 99.5 2.3E-13 7.8E-18 121.6 13.9 113 184-302 62-188 (302)
39 3ggd_A SAM-dependent methyltra 99.5 9.6E-14 3.3E-18 120.0 10.9 103 194-301 54-167 (245)
40 3vc1_A Geranyl diphosphate 2-C 99.5 2.9E-13 9.9E-18 121.5 14.5 120 175-302 97-226 (312)
41 2xvm_A Tellurite resistance pr 99.5 2.2E-13 7.6E-18 113.5 12.7 111 185-302 23-141 (199)
42 2fk8_A Methoxy mycolic acid sy 99.5 2.7E-13 9.4E-18 121.9 14.0 113 184-302 80-199 (318)
43 3mgg_A Methyltransferase; NYSG 99.5 1.4E-13 4.7E-18 121.2 11.6 101 194-299 35-144 (276)
44 4hg2_A Methyltransferase type 99.5 1.2E-13 4E-18 120.9 10.6 98 195-301 38-139 (257)
45 3dli_A Methyltransferase; PSI- 99.5 2.6E-13 8.8E-18 117.1 12.6 98 194-299 39-142 (240)
46 3lcc_A Putative methyl chlorid 99.5 1.2E-13 4E-18 118.8 10.1 101 197-302 67-176 (235)
47 3h2b_A SAM-dependent methyltra 99.5 8.7E-14 3E-18 116.8 9.1 100 197-301 42-145 (203)
48 3gu3_A Methyltransferase; alph 99.5 1.9E-13 6.6E-18 121.1 11.1 101 194-299 20-128 (284)
49 3g5t_A Trans-aconitate 3-methy 99.5 3.4E-13 1.2E-17 120.3 12.3 99 195-299 35-151 (299)
50 2p35_A Trans-aconitate 2-methy 99.5 2.1E-13 7.1E-18 118.6 10.4 107 185-298 24-133 (259)
51 3g5l_A Putative S-adenosylmeth 99.5 3.9E-13 1.3E-17 116.7 12.1 104 186-297 36-145 (253)
52 3f4k_A Putative methyltransfer 99.5 4.5E-13 1.5E-17 116.4 12.4 101 194-301 44-154 (257)
53 3g07_A 7SK snRNA methylphospha 99.5 1.1E-13 3.9E-18 123.2 8.6 100 195-297 45-220 (292)
54 3bxo_A N,N-dimethyltransferase 99.5 5.6E-13 1.9E-17 114.4 12.6 103 195-302 39-146 (239)
55 3kkz_A Uncharacterized protein 99.5 2.9E-13 9.8E-18 118.7 10.9 102 194-302 44-155 (267)
56 2ex4_A Adrenal gland protein A 99.4 1.8E-13 6.2E-18 118.1 9.1 102 196-301 79-189 (241)
57 3ccf_A Cyclopropane-fatty-acyl 99.4 2.7E-13 9.4E-18 119.6 9.7 107 184-299 47-156 (279)
58 3bkw_A MLL3908 protein, S-aden 99.4 6.3E-13 2.2E-17 114.3 11.6 106 185-298 34-145 (243)
59 3ocj_A Putative exported prote 99.4 1.5E-13 5.3E-18 122.9 7.8 106 194-302 116-232 (305)
60 3m70_A Tellurite resistance pr 99.4 8.5E-13 2.9E-17 116.8 12.4 111 185-302 111-228 (286)
61 2gb4_A Thiopurine S-methyltran 99.4 5.4E-13 1.9E-17 116.3 10.9 101 195-300 67-194 (252)
62 3i9f_A Putative type 11 methyl 99.4 1.8E-13 6.3E-18 111.5 7.4 101 194-303 15-118 (170)
63 2p7i_A Hypothetical protein; p 99.4 4.7E-13 1.6E-17 115.3 10.1 98 195-299 41-143 (250)
64 3uwp_A Histone-lysine N-methyl 99.4 5.2E-13 1.8E-17 122.7 10.7 113 184-304 163-295 (438)
65 3ofk_A Nodulation protein S; N 99.4 7.7E-13 2.6E-17 112.0 11.0 100 194-298 49-155 (216)
66 3l8d_A Methyltransferase; stru 99.4 8.8E-13 3E-17 113.5 11.4 99 194-299 51-155 (242)
67 3cgg_A SAM-dependent methyltra 99.4 1E-12 3.6E-17 108.7 11.0 99 195-298 45-148 (195)
68 2p8j_A S-adenosylmethionine-de 99.4 8.3E-13 2.8E-17 111.1 10.1 105 195-303 22-134 (209)
69 3ege_A Putative methyltransfer 99.4 1.8E-12 6.3E-17 113.3 12.4 106 184-300 24-133 (261)
70 3sm3_A SAM-dependent methyltra 99.4 1.9E-12 6.5E-17 110.6 11.8 102 194-300 28-144 (235)
71 3g2m_A PCZA361.24; SAM-depende 99.4 1.1E-12 3.9E-17 116.8 10.5 109 184-300 73-193 (299)
72 3bkx_A SAM-dependent methyltra 99.4 2.1E-12 7.3E-17 113.4 11.9 112 185-303 34-165 (275)
73 4htf_A S-adenosylmethionine-de 99.4 1.1E-12 3.6E-17 116.1 9.9 98 195-299 67-175 (285)
74 3e05_A Precorrin-6Y C5,15-meth 99.4 6.2E-12 2.1E-16 105.6 14.1 105 185-299 31-144 (204)
75 2yqz_A Hypothetical protein TT 99.4 2.9E-12 9.8E-17 111.5 12.4 96 194-296 37-140 (263)
76 4fsd_A Arsenic methyltransfera 99.4 1.9E-12 6.6E-17 119.6 11.7 103 195-302 82-208 (383)
77 3e23_A Uncharacterized protein 99.4 1.6E-12 5.4E-17 109.8 9.6 100 194-299 41-143 (211)
78 3thr_A Glycine N-methyltransfe 99.4 9.3E-13 3.2E-17 116.8 8.4 108 184-298 47-176 (293)
79 3hm2_A Precorrin-6Y C5,15-meth 99.4 2.3E-12 7.7E-17 105.5 9.9 97 194-300 23-130 (178)
80 1wzn_A SAM-dependent methyltra 99.4 7.6E-12 2.6E-16 108.4 13.7 96 195-295 40-143 (252)
81 2pxx_A Uncharacterized protein 99.4 2.4E-12 8.2E-17 108.4 9.9 102 195-300 41-162 (215)
82 1af7_A Chemotaxis receptor met 99.4 1.6E-12 5.3E-17 114.6 8.8 97 196-295 105-250 (274)
83 1y8c_A S-adenosylmethionine-de 99.3 4.6E-12 1.6E-16 108.9 11.1 95 196-295 37-140 (246)
84 1ri5_A MRNA capping enzyme; me 99.3 9.4E-12 3.2E-16 110.3 11.8 101 195-299 63-176 (298)
85 2gs9_A Hypothetical protein TT 99.3 9E-12 3.1E-16 105.0 10.3 94 196-299 36-134 (211)
86 2aot_A HMT, histamine N-methyl 99.3 6.8E-12 2.3E-16 111.5 10.0 98 196-298 52-173 (292)
87 3htx_A HEN1; HEN1, small RNA m 99.3 1.4E-11 4.6E-16 121.4 12.7 100 195-298 720-835 (950)
88 3d2l_A SAM-dependent methyltra 99.3 8.8E-12 3E-16 107.1 10.2 95 195-295 32-135 (243)
89 3fpf_A Mtnas, putative unchara 99.3 1.1E-11 3.7E-16 109.7 10.8 97 194-298 120-223 (298)
90 3iv6_A Putative Zn-dependent a 99.3 1.6E-11 5.3E-16 107.4 11.2 106 184-297 35-148 (261)
91 3bgv_A MRNA CAP guanine-N7 met 99.3 2.3E-11 7.9E-16 109.1 12.5 100 195-298 33-156 (313)
92 4dcm_A Ribosomal RNA large sub 99.3 1.4E-11 4.8E-16 113.4 11.2 108 185-297 213-334 (375)
93 1dus_A MJ0882; hypothetical pr 99.3 2.9E-11 1E-15 99.8 12.0 108 184-299 42-159 (194)
94 3tfw_A Putative O-methyltransf 99.3 2.5E-11 8.4E-16 105.4 11.8 100 194-301 61-174 (248)
95 2pjd_A Ribosomal RNA small sub 99.3 7.5E-12 2.6E-16 114.0 8.1 111 184-299 186-305 (343)
96 3giw_A Protein of unknown func 99.3 5.2E-11 1.8E-15 104.2 12.9 104 195-301 77-204 (277)
97 2kw5_A SLR1183 protein; struct 99.3 3.7E-11 1.3E-15 100.5 11.4 96 199-301 32-135 (202)
98 1yb2_A Hypothetical protein TA 99.3 1.9E-11 6.5E-16 107.7 9.9 103 185-299 101-213 (275)
99 3cc8_A Putative methyltransfer 99.3 2E-11 6.8E-16 103.7 9.7 105 183-299 22-132 (230)
100 3e8s_A Putative SAM dependent 99.2 2.6E-11 8.9E-16 102.8 10.3 105 185-300 43-155 (227)
101 3mti_A RRNA methylase; SAM-dep 99.2 3.5E-11 1.2E-15 99.3 10.7 102 194-300 20-138 (185)
102 3b3j_A Histone-arginine methyl 99.2 3.4E-11 1.2E-15 114.3 12.0 107 183-295 147-261 (480)
103 1yzh_A TRNA (guanine-N(7)-)-me 99.2 5.5E-11 1.9E-15 100.7 11.7 98 196-297 41-156 (214)
104 3mb5_A SAM-dependent methyltra 99.2 1.5E-11 5.1E-16 106.8 8.4 104 184-299 83-196 (255)
105 3fzg_A 16S rRNA methylase; met 99.2 1.6E-11 5.5E-16 101.3 8.0 97 194-297 47-152 (200)
106 1zx0_A Guanidinoacetate N-meth 99.2 1.1E-11 3.7E-16 106.6 7.2 101 195-299 59-172 (236)
107 1u2z_A Histone-lysine N-methyl 99.2 5.8E-11 2E-15 110.7 12.4 111 185-303 233-365 (433)
108 3orh_A Guanidinoacetate N-meth 99.2 8.1E-12 2.8E-16 107.8 5.9 98 195-298 59-171 (236)
109 1vlm_A SAM-dependent methyltra 99.2 3.2E-11 1.1E-15 102.4 9.6 90 197-299 48-141 (219)
110 2fca_A TRNA (guanine-N(7)-)-me 99.2 5.2E-11 1.8E-15 101.0 10.8 98 196-297 38-153 (213)
111 2vdw_A Vaccinia virus capping 99.2 2.2E-11 7.5E-16 108.9 8.8 99 196-298 48-170 (302)
112 3q87_B N6 adenine specific DNA 99.2 4.7E-11 1.6E-15 97.6 9.9 95 195-300 22-126 (170)
113 3dxy_A TRNA (guanine-N(7)-)-me 99.2 1.9E-11 6.6E-16 104.1 7.6 98 196-297 34-150 (218)
114 3njr_A Precorrin-6Y methylase; 99.2 1.2E-10 4.2E-15 98.1 12.4 94 194-299 53-156 (204)
115 3grz_A L11 mtase, ribosomal pr 99.2 3.1E-11 1.1E-15 101.3 8.5 98 194-300 58-162 (205)
116 1fbn_A MJ fibrillarin homologu 99.2 7.7E-11 2.6E-15 101.0 11.1 95 194-296 72-177 (230)
117 2y1w_A Histone-arginine methyl 99.2 3.9E-11 1.3E-15 109.4 9.5 107 184-296 40-154 (348)
118 4dzr_A Protein-(glutamine-N5) 99.2 6.5E-12 2.2E-16 105.6 3.8 101 195-298 29-165 (215)
119 3eey_A Putative rRNA methylase 99.2 4.9E-11 1.7E-15 99.4 9.1 104 194-300 20-142 (197)
120 1o9g_A RRNA methyltransferase; 99.2 5.5E-11 1.9E-15 103.2 9.6 101 196-299 51-216 (250)
121 3mq2_A 16S rRNA methyltransfer 99.2 3.4E-11 1.2E-15 102.1 8.1 98 194-296 25-139 (218)
122 2b3t_A Protein methyltransfera 99.2 1.1E-10 3.9E-15 102.7 11.7 99 195-296 108-237 (276)
123 3ntv_A MW1564 protein; rossman 99.2 4.8E-11 1.6E-15 102.5 8.9 99 194-300 69-179 (232)
124 3p2e_A 16S rRNA methylase; met 99.2 3.6E-11 1.2E-15 102.9 8.1 100 195-297 23-139 (225)
125 2avn_A Ubiquinone/menaquinone 99.2 6.6E-11 2.2E-15 103.2 9.9 98 195-299 53-154 (260)
126 3u81_A Catechol O-methyltransf 99.2 3.4E-11 1.1E-15 102.6 7.7 102 194-301 56-174 (221)
127 1nt2_A Fibrillarin-like PRE-rR 99.2 1.4E-10 4.7E-15 98.3 10.9 95 194-296 55-160 (210)
128 3lbf_A Protein-L-isoaspartate 99.2 1.2E-10 4.3E-15 97.9 10.5 98 186-298 69-175 (210)
129 1jsx_A Glucose-inhibited divis 99.2 8.5E-11 2.9E-15 98.6 9.3 92 197-297 66-165 (207)
130 2yxe_A Protein-L-isoaspartate 99.2 1.2E-10 4.1E-15 98.4 10.3 100 185-297 68-177 (215)
131 3duw_A OMT, O-methyltransferas 99.2 1.1E-10 3.9E-15 99.1 10.0 100 194-301 56-171 (223)
132 3q7e_A Protein arginine N-meth 99.2 1.3E-10 4.6E-15 105.9 10.9 97 194-294 64-170 (349)
133 2i62_A Nicotinamide N-methyltr 99.2 1.8E-11 6.1E-16 106.6 4.7 100 195-298 55-199 (265)
134 2bm8_A Cephalosporin hydroxyla 99.1 1.2E-10 4.3E-15 100.3 9.8 95 196-298 81-188 (236)
135 3p9n_A Possible methyltransfer 99.1 3.3E-10 1.1E-14 93.8 11.8 100 195-299 43-155 (189)
136 2gpy_A O-methyltransferase; st 99.1 1.7E-10 5.8E-15 98.9 10.3 98 194-299 52-162 (233)
137 3tr6_A O-methyltransferase; ce 99.1 1.1E-10 3.9E-15 99.2 8.9 100 194-301 62-178 (225)
138 2g72_A Phenylethanolamine N-me 99.1 5.1E-11 1.7E-15 105.6 6.8 99 196-298 71-216 (289)
139 1xdz_A Methyltransferase GIDB; 99.1 6.9E-11 2.4E-15 101.9 7.5 94 195-297 69-174 (240)
140 1nv8_A HEMK protein; class I a 99.1 2.7E-10 9.3E-15 100.9 11.2 95 196-295 123-247 (284)
141 1jg1_A PIMT;, protein-L-isoasp 99.1 1.6E-10 5.4E-15 99.3 9.2 100 184-297 81-189 (235)
142 3gjy_A Spermidine synthase; AP 99.1 1.6E-10 5.4E-15 103.5 9.3 98 197-297 90-200 (317)
143 2a14_A Indolethylamine N-methy 99.1 3.3E-11 1.1E-15 105.5 4.8 101 195-299 54-199 (263)
144 2yxd_A Probable cobalt-precorr 99.1 2.1E-10 7.3E-15 93.8 9.4 93 194-299 33-133 (183)
145 3ckk_A TRNA (guanine-N(7)-)-me 99.1 1.7E-10 5.7E-15 99.5 9.1 98 195-296 45-167 (235)
146 2pwy_A TRNA (adenine-N(1)-)-me 99.1 9.2E-11 3.2E-15 101.8 7.5 105 184-300 86-201 (258)
147 2ozv_A Hypothetical protein AT 99.1 2.5E-10 8.4E-15 99.8 10.1 100 194-296 34-169 (260)
148 3kr9_A SAM-dependent methyltra 99.1 2.5E-10 8.6E-15 97.3 9.6 95 195-296 14-118 (225)
149 1l3i_A Precorrin-6Y methyltran 99.1 2.1E-10 7.1E-15 94.5 8.9 96 194-299 31-136 (192)
150 3g89_A Ribosomal RNA small sub 99.1 1.2E-10 4E-15 101.3 7.5 95 195-298 79-185 (249)
151 1vbf_A 231AA long hypothetical 99.1 3.8E-10 1.3E-14 96.3 10.6 100 184-298 60-166 (231)
152 2fyt_A Protein arginine N-meth 99.1 6.5E-10 2.2E-14 101.0 12.4 97 194-294 62-168 (340)
153 3evz_A Methyltransferase; NYSG 99.1 2.8E-10 9.6E-15 97.1 9.4 100 194-297 53-179 (230)
154 2zfu_A Nucleomethylin, cerebra 99.1 1E-10 3.6E-15 98.8 6.5 86 195-300 66-154 (215)
155 4e2x_A TCAB9; kijanose, tetron 99.1 4.2E-11 1.4E-15 111.7 4.3 107 182-299 95-210 (416)
156 2ipx_A RRNA 2'-O-methyltransfe 99.1 3.7E-10 1.3E-14 96.8 9.6 95 194-295 75-180 (233)
157 1p91_A Ribosomal RNA large sub 99.1 4E-10 1.4E-14 98.5 10.1 94 195-300 84-181 (269)
158 3dmg_A Probable ribosomal RNA 99.1 5.4E-10 1.8E-14 103.0 11.3 97 196-297 233-340 (381)
159 3r3h_A O-methyltransferase, SA 99.1 1.1E-10 3.7E-15 101.1 6.2 100 194-301 58-174 (242)
160 3r0q_C Probable protein argini 99.1 2.9E-10 1E-14 104.7 9.2 101 194-298 61-170 (376)
161 1dl5_A Protein-L-isoaspartate 99.1 5E-10 1.7E-14 100.7 10.4 101 185-298 66-176 (317)
162 3c3p_A Methyltransferase; NP_9 99.1 1.8E-10 6.1E-15 97.1 7.0 98 195-300 55-163 (210)
163 3adn_A Spermidine synthase; am 99.1 2.1E-10 7.3E-15 102.1 7.8 100 195-297 82-198 (294)
164 3bwc_A Spermidine synthase; SA 99.1 2.5E-10 8.6E-15 102.1 8.2 100 195-297 94-210 (304)
165 1g8a_A Fibrillarin-like PRE-rR 99.1 1E-09 3.5E-14 93.5 11.7 96 194-296 71-177 (227)
166 1sui_A Caffeoyl-COA O-methyltr 99.1 6.1E-10 2.1E-14 96.6 10.1 98 195-300 78-193 (247)
167 3lpm_A Putative methyltransfer 99.1 5.4E-10 1.9E-14 97.4 9.8 99 194-296 46-175 (259)
168 1o54_A SAM-dependent O-methylt 99.1 5.6E-10 1.9E-14 98.3 9.9 104 184-299 102-215 (277)
169 1g6q_1 HnRNP arginine N-methyl 99.1 5.8E-10 2E-14 100.8 10.2 97 194-294 36-142 (328)
170 2vdv_E TRNA (guanine-N(7)-)-me 99.1 2.5E-10 8.5E-15 98.8 7.5 94 195-296 48-172 (246)
171 3dr5_A Putative O-methyltransf 99.0 2.7E-10 9.3E-15 97.2 7.3 94 199-300 59-166 (221)
172 1ws6_A Methyltransferase; stru 99.0 2.6E-10 8.7E-15 92.4 6.8 95 196-299 41-149 (171)
173 4df3_A Fibrillarin-like rRNA/T 99.0 6.7E-10 2.3E-14 95.2 9.6 107 184-297 64-182 (233)
174 2hnk_A SAM-dependent O-methylt 99.0 3.6E-10 1.2E-14 97.3 8.0 100 194-301 58-185 (239)
175 1ej0_A FTSJ; methyltransferase 99.0 6.8E-10 2.3E-14 90.0 9.2 98 195-300 21-139 (180)
176 2plw_A Ribosomal RNA methyltra 99.0 1E-09 3.4E-14 91.6 10.4 96 194-297 20-154 (201)
177 2avd_A Catechol-O-methyltransf 99.0 6.2E-10 2.1E-14 94.9 8.6 99 194-300 67-182 (229)
178 3lec_A NADB-rossmann superfami 99.0 9.6E-10 3.3E-14 93.9 9.5 96 195-297 20-125 (230)
179 3gnl_A Uncharacterized protein 99.0 9.6E-10 3.3E-14 94.7 9.3 96 195-297 20-125 (244)
180 3m33_A Uncharacterized protein 99.0 2.1E-10 7.2E-15 97.9 4.9 87 195-294 47-139 (226)
181 2fhp_A Methylase, putative; al 99.0 7.3E-10 2.5E-14 91.1 8.0 98 195-299 43-156 (187)
182 2nxc_A L11 mtase, ribosomal pr 99.0 6.2E-10 2.1E-14 96.9 7.7 95 195-300 119-221 (254)
183 3c3y_A Pfomt, O-methyltransfer 99.0 1.2E-09 4.2E-14 94.0 9.6 97 194-298 68-182 (237)
184 1i9g_A Hypothetical protein RV 99.0 1.5E-09 5.2E-14 95.4 10.3 104 184-299 89-205 (280)
185 2frn_A Hypothetical protein PH 99.0 7.8E-10 2.7E-14 97.6 8.4 96 195-300 124-228 (278)
186 2h00_A Methyltransferase 10 do 99.0 5.2E-11 1.8E-15 103.5 0.2 100 196-298 65-193 (254)
187 3tma_A Methyltransferase; thum 99.0 2E-09 6.7E-14 98.3 10.7 111 183-298 192-318 (354)
188 2pbf_A Protein-L-isoaspartate 99.0 2.3E-09 7.8E-14 91.2 10.4 94 194-298 78-194 (227)
189 2esr_A Methyltransferase; stru 99.0 2E-10 6.9E-15 93.9 3.6 98 195-299 30-140 (177)
190 2yvl_A TRMI protein, hypotheti 99.0 6E-09 2.1E-13 89.6 12.9 101 185-299 82-192 (248)
191 2ift_A Putative methylase HI07 99.0 6.3E-10 2.1E-14 93.4 6.4 97 196-299 53-165 (201)
192 3cbg_A O-methyltransferase; cy 99.0 8.9E-10 3.1E-14 94.5 7.3 99 195-301 71-186 (232)
193 1r18_A Protein-L-isoaspartate( 99.0 1.1E-09 3.8E-14 93.4 7.7 93 194-297 82-194 (227)
194 1iy9_A Spermidine synthase; ro 98.9 7.3E-10 2.5E-14 97.7 6.2 99 195-296 74-188 (275)
195 3lcv_B Sisomicin-gentamicin re 98.9 9.1E-10 3.1E-14 95.0 6.6 100 195-298 131-237 (281)
196 3sso_A Methyltransferase; macr 98.9 6.2E-10 2.1E-14 102.1 5.8 95 195-299 215-326 (419)
197 1i1n_A Protein-L-isoaspartate 98.9 3.6E-09 1.2E-13 89.9 9.9 94 194-298 75-183 (226)
198 3a27_A TYW2, uncharacterized p 98.9 1.5E-09 5E-14 95.5 7.4 99 194-301 117-223 (272)
199 2fpo_A Methylase YHHF; structu 98.9 2.6E-09 9E-14 89.6 8.7 97 196-299 54-162 (202)
200 2i7c_A Spermidine synthase; tr 98.9 1.6E-09 5.4E-14 95.9 7.6 99 195-296 77-191 (283)
201 2b2c_A Spermidine synthase; be 98.9 1.2E-09 4.2E-14 98.0 7.0 100 195-297 107-222 (314)
202 3id6_C Fibrillarin-like rRNA/T 98.9 5.6E-09 1.9E-13 89.6 10.6 105 184-296 63-180 (232)
203 3bzb_A Uncharacterized protein 98.9 8E-09 2.7E-13 91.2 11.9 98 195-296 78-204 (281)
204 2o07_A Spermidine synthase; st 98.9 9E-10 3.1E-14 98.5 5.8 100 195-297 94-209 (304)
205 2pt6_A Spermidine synthase; tr 98.9 1.6E-09 5.6E-14 97.5 7.4 99 195-296 115-229 (321)
206 1ixk_A Methyltransferase; open 98.9 3.6E-09 1.2E-13 95.0 9.6 103 194-299 116-248 (315)
207 1uir_A Polyamine aminopropyltr 98.9 1.6E-09 5.5E-14 97.3 7.2 100 195-297 76-195 (314)
208 1mjf_A Spermidine synthase; sp 98.9 1.6E-09 5.4E-14 95.8 6.8 98 195-296 74-192 (281)
209 1xj5_A Spermidine synthase 1; 98.9 1.6E-09 5.4E-14 98.1 6.8 99 195-296 119-234 (334)
210 3dou_A Ribosomal RNA large sub 98.9 2.4E-09 8.1E-14 89.2 7.2 103 185-298 15-140 (191)
211 1zq9_A Probable dimethyladenos 98.9 2.4E-09 8E-14 94.9 7.3 102 184-293 18-143 (285)
212 3frh_A 16S rRNA methylase; met 98.9 4.3E-09 1.5E-13 89.9 8.2 96 195-297 104-206 (253)
213 3gdh_A Trimethylguanosine synt 98.9 2.3E-10 8E-15 98.4 0.4 87 196-286 78-173 (241)
214 2b25_A Hypothetical protein; s 98.9 4.7E-09 1.6E-13 95.0 9.0 103 185-299 96-221 (336)
215 2nyu_A Putative ribosomal RNA 98.9 3.1E-09 1.1E-13 88.1 7.2 97 194-298 20-146 (196)
216 4azs_A Methyltransferase WBDD; 98.9 1.6E-09 5.5E-14 105.0 5.9 104 194-302 64-178 (569)
217 2oxt_A Nucleoside-2'-O-methylt 98.9 3.5E-09 1.2E-13 92.7 7.6 98 194-298 72-186 (265)
218 1ne2_A Hypothetical protein TA 98.9 6.6E-09 2.2E-13 86.7 8.9 89 195-284 50-139 (200)
219 2wa2_A Non-structural protein 98.9 3E-09 1E-13 93.7 7.0 98 194-298 80-194 (276)
220 1inl_A Spermidine synthase; be 98.9 2.1E-09 7.1E-14 95.8 6.1 99 195-296 89-204 (296)
221 2cmg_A Spermidine synthase; tr 98.8 6.9E-09 2.4E-13 90.7 8.1 90 195-296 71-170 (262)
222 3ajd_A Putative methyltransfer 98.8 7.8E-09 2.7E-13 90.9 8.4 104 194-300 81-214 (274)
223 4hc4_A Protein arginine N-meth 98.8 1.1E-08 3.6E-13 93.9 9.5 95 196-294 83-186 (376)
224 2p41_A Type II methyltransfera 98.8 4.1E-09 1.4E-13 94.2 6.4 96 194-295 80-189 (305)
225 3hp7_A Hemolysin, putative; st 98.8 7.7E-09 2.6E-13 91.4 7.9 101 185-296 75-184 (291)
226 2ld4_A Anamorsin; methyltransf 98.8 5.5E-09 1.9E-13 85.3 6.2 87 194-301 10-105 (176)
227 2yxl_A PH0851 protein, 450AA l 98.8 2.4E-08 8.1E-13 94.1 10.9 105 194-301 257-393 (450)
228 2h1r_A Dimethyladenosine trans 98.7 1.8E-08 6E-13 89.8 7.8 89 184-277 32-127 (299)
229 2f8l_A Hypothetical protein LM 98.7 1.5E-08 5E-13 92.1 7.1 99 196-297 130-256 (344)
230 1qam_A ERMC' methyltransferase 98.7 4E-08 1.4E-12 85.0 9.1 85 183-271 19-109 (244)
231 3opn_A Putative hemolysin; str 98.7 2.9E-08 1E-12 85.1 8.2 90 196-296 37-136 (232)
232 2igt_A SAM dependent methyltra 98.6 6.9E-08 2.4E-12 87.2 9.1 98 196-299 153-274 (332)
233 2ih2_A Modification methylase 98.6 6.1E-08 2.1E-12 90.1 8.9 96 196-298 39-165 (421)
234 1wy7_A Hypothetical protein PH 98.6 1.8E-07 6.1E-12 78.2 10.7 89 195-284 48-141 (207)
235 2frx_A Hypothetical protein YE 98.6 1.6E-07 5.4E-12 88.9 11.5 102 196-300 117-249 (479)
236 1sqg_A SUN protein, FMU protei 98.6 6E-08 2.1E-12 90.7 8.2 104 194-300 244-377 (429)
237 3m6w_A RRNA methylase; rRNA me 98.6 4.3E-08 1.5E-12 92.2 6.7 102 194-299 99-231 (464)
238 3k6r_A Putative transferase PH 98.6 6.8E-08 2.3E-12 84.9 7.3 98 194-301 123-229 (278)
239 3tm4_A TRNA (guanine N2-)-meth 98.6 6.2E-08 2.1E-12 89.0 7.1 90 195-284 216-321 (373)
240 1yub_A Ermam, rRNA methyltrans 98.6 1.3E-08 4.5E-13 87.9 2.0 106 184-296 19-144 (245)
241 2yx1_A Hypothetical protein MJ 98.5 1.7E-07 5.7E-12 84.9 7.9 94 195-300 194-294 (336)
242 3k0b_A Predicted N6-adenine-sp 98.5 3.2E-07 1.1E-11 84.7 9.6 113 183-298 190-351 (393)
243 3gru_A Dimethyladenosine trans 98.5 3.3E-07 1.1E-11 81.3 8.9 89 184-277 40-135 (295)
244 3ldg_A Putative uncharacterize 98.5 1.1E-06 3.6E-11 81.0 12.5 113 183-298 183-344 (384)
245 2as0_A Hypothetical protein PH 98.5 1.2E-07 4E-12 87.8 5.9 99 196-298 217-336 (396)
246 1wxx_A TT1595, hypothetical pr 98.4 2.8E-07 9.7E-12 84.8 7.5 99 196-299 209-327 (382)
247 3m4x_A NOL1/NOP2/SUN family pr 98.4 1.7E-07 5.8E-12 88.0 5.9 103 194-299 103-236 (456)
248 2b78_A Hypothetical protein SM 98.4 2.8E-07 9.6E-12 84.9 6.8 99 195-297 211-331 (385)
249 3ldu_A Putative methylase; str 98.4 8.5E-07 2.9E-11 81.7 9.5 113 183-298 184-345 (385)
250 2okc_A Type I restriction enzy 98.4 3.1E-07 1.1E-11 86.3 6.5 101 195-298 170-308 (445)
251 3c0k_A UPF0064 protein YCCW; P 98.4 2.8E-07 9.6E-12 85.2 6.0 99 195-297 219-339 (396)
252 2xyq_A Putative 2'-O-methyl tr 98.4 5.8E-07 2E-11 79.5 7.5 93 194-298 61-172 (290)
253 1m6y_A S-adenosyl-methyltransf 98.4 5.6E-07 1.9E-11 80.1 7.4 77 184-262 16-105 (301)
254 3ftd_A Dimethyladenosine trans 98.4 9.1E-07 3.1E-11 76.6 8.3 85 184-271 21-110 (249)
255 1uwv_A 23S rRNA (uracil-5-)-me 98.3 2.3E-06 7.7E-11 80.1 11.1 85 194-286 284-381 (433)
256 3fut_A Dimethyladenosine trans 98.3 1.4E-06 4.9E-11 76.2 8.9 90 184-279 37-133 (271)
257 2qfm_A Spermine synthase; sper 98.3 7.5E-07 2.6E-11 80.7 7.2 98 195-296 187-313 (364)
258 4dmg_A Putative uncharacterize 98.3 1.4E-06 4.7E-11 80.5 7.9 100 196-300 214-329 (393)
259 2jjq_A Uncharacterized RNA met 98.3 4.8E-06 1.7E-10 77.6 11.6 91 195-296 289-386 (425)
260 3o4f_A Spermidine synthase; am 98.3 1.8E-06 6.3E-11 76.1 8.1 99 195-296 82-197 (294)
261 4gqb_A Protein arginine N-meth 98.2 7.8E-07 2.7E-11 86.4 5.5 126 158-293 324-463 (637)
262 3tqs_A Ribosomal RNA small sub 98.2 1.4E-06 4.8E-11 75.7 6.4 82 184-271 19-111 (255)
263 3uzu_A Ribosomal RNA small sub 98.2 7.9E-07 2.7E-11 78.3 4.3 84 185-270 33-128 (279)
264 3v97_A Ribosomal RNA large sub 98.2 4.8E-06 1.6E-10 82.4 9.6 98 196-297 539-657 (703)
265 3b5i_A S-adenosyl-L-methionine 98.2 9.1E-06 3.1E-10 74.3 10.4 103 196-301 52-229 (374)
266 1qyr_A KSGA, high level kasuga 98.1 2.3E-06 8E-11 74.1 5.0 90 184-277 11-111 (252)
267 3bt7_A TRNA (uracil-5-)-methyl 98.1 2.7E-06 9.2E-11 77.9 5.6 88 197-297 214-326 (369)
268 3v97_A Ribosomal RNA large sub 98.1 1.3E-05 4.5E-10 79.3 10.5 110 183-297 179-347 (703)
269 2r6z_A UPF0341 protein in RSP 98.1 9.3E-06 3.2E-10 70.6 7.9 71 194-266 81-172 (258)
270 2efj_A 3,7-dimethylxanthine me 98.0 1.3E-05 4.4E-10 73.4 8.8 103 197-302 53-230 (384)
271 3ua3_A Protein arginine N-meth 98.0 7.3E-06 2.5E-10 79.8 6.3 126 158-294 379-531 (745)
272 2b9e_A NOL1/NOP2/SUN domain fa 97.9 3.5E-05 1.2E-09 68.7 9.0 68 194-261 100-180 (309)
273 2ar0_A M.ecoki, type I restric 97.9 1.6E-05 5.3E-10 76.5 7.2 100 195-297 168-312 (541)
274 1rjd_A PPM1P, carboxy methyl t 97.9 0.00014 4.6E-09 65.6 13.0 103 195-301 96-236 (334)
275 1m6e_X S-adenosyl-L-methionnin 97.9 2.7E-05 9.2E-10 70.6 8.2 105 195-302 50-214 (359)
276 3evf_A RNA-directed RNA polyme 97.9 2.8E-05 9.5E-10 67.4 7.6 99 194-295 72-182 (277)
277 2dul_A N(2),N(2)-dimethylguano 97.8 5.1E-05 1.7E-09 69.6 8.2 92 196-296 47-163 (378)
278 2k4m_A TR8_protein, UPF0146 pr 97.7 0.0001 3.6E-09 57.7 7.9 83 195-298 34-122 (153)
279 3axs_A Probable N(2),N(2)-dime 97.7 3.1E-05 1.1E-09 71.2 5.4 94 195-297 51-158 (392)
280 3gcz_A Polyprotein; flavivirus 97.7 3E-05 1E-09 67.4 4.4 107 184-295 80-199 (282)
281 3c6k_A Spermine synthase; sper 97.7 7.5E-05 2.5E-09 67.9 7.0 97 195-295 204-329 (381)
282 3khk_A Type I restriction-modi 97.6 7.3E-05 2.5E-09 71.7 5.8 98 197-297 245-395 (544)
283 4auk_A Ribosomal RNA large sub 97.5 0.00072 2.5E-08 61.2 10.9 96 194-298 209-307 (375)
284 3s1s_A Restriction endonucleas 97.5 0.0005 1.7E-08 68.1 10.1 99 196-297 321-465 (878)
285 2oyr_A UPF0341 protein YHIQ; a 97.4 0.0002 6.9E-09 62.0 6.6 68 198-267 90-176 (258)
286 3ll7_A Putative methyltransfer 97.4 8.9E-05 3E-09 68.4 4.5 65 196-262 93-170 (410)
287 2heo_A Z-DNA binding protein 1 97.4 9.1E-05 3.1E-09 50.3 2.6 55 37-104 12-66 (67)
288 3cvo_A Methyltransferase-like 97.3 0.0017 5.7E-08 54.0 10.6 92 194-299 28-155 (202)
289 3lkd_A Type I restriction-modi 97.3 0.00059 2E-08 65.4 9.0 98 196-297 221-358 (542)
290 2qy6_A UPF0209 protein YFCK; s 97.3 0.00017 5.8E-09 62.5 4.2 97 196-295 60-211 (257)
291 3eld_A Methyltransferase; flav 97.3 0.00031 1E-08 61.4 5.7 99 193-295 78-189 (300)
292 1wg8_A Predicted S-adenosylmet 97.3 0.00047 1.6E-08 60.1 6.8 76 182-261 10-95 (285)
293 2uyo_A Hypothetical protein ML 97.2 0.0026 9E-08 56.5 11.6 102 195-302 101-222 (310)
294 3b73_A PHIH1 repressor-like pr 97.1 0.00035 1.2E-08 52.3 3.4 62 37-112 15-78 (111)
295 1y0u_A Arsenical resistance op 97.0 0.00046 1.6E-08 50.1 3.6 62 30-108 26-87 (96)
296 3pqk_A Biofilm growth-associat 96.9 0.00085 2.9E-08 49.2 4.5 65 30-106 18-82 (102)
297 3jth_A Transcription activator 96.9 0.0007 2.4E-08 49.2 3.6 66 29-106 17-82 (98)
298 1xmk_A Double-stranded RNA-spe 96.7 0.00097 3.3E-08 46.6 3.3 60 37-108 13-73 (79)
299 3mq0_A Transcriptional repress 96.7 0.00072 2.5E-08 59.1 3.0 58 38-108 33-90 (275)
300 3tka_A Ribosomal RNA small sub 96.6 0.004 1.4E-07 55.5 7.2 68 182-251 45-115 (347)
301 3f6o_A Probable transcriptiona 96.6 0.00083 2.8E-08 50.8 2.4 67 29-107 12-78 (118)
302 1u2w_A CADC repressor, cadmium 96.6 0.0012 4.2E-08 50.2 3.3 68 28-106 35-102 (122)
303 3p8z_A Mtase, non-structural p 96.6 0.0027 9.3E-08 53.6 5.6 101 184-286 68-179 (267)
304 2px2_A Genome polyprotein [con 96.6 0.0059 2E-07 52.2 7.7 104 184-295 63-181 (269)
305 3r4k_A Transcriptional regulat 96.6 0.0012 4E-08 57.2 3.2 60 38-109 9-68 (260)
306 2oqg_A Possible transcriptiona 96.6 0.0012 3.9E-08 49.3 2.8 65 32-108 18-82 (114)
307 3lkz_A Non-structural protein 96.5 0.0078 2.7E-07 52.5 7.8 106 184-295 84-202 (321)
308 2wk1_A NOVP; transferase, O-me 96.5 0.0029 9.9E-08 55.4 5.2 97 195-299 105-245 (282)
309 1r1u_A CZRA, repressor protein 96.4 0.0015 5.1E-08 48.3 2.7 52 31-87 22-73 (106)
310 3f6v_A Possible transcriptiona 96.4 0.0016 5.5E-08 51.6 3.0 69 28-108 51-119 (151)
311 3cuo_A Uncharacterized HTH-typ 96.4 0.0019 6.6E-08 46.6 3.2 66 31-107 20-85 (99)
312 1qgp_A Protein (double strande 96.4 0.0023 7.7E-08 44.6 3.1 58 37-105 16-75 (77)
313 2kko_A Possible transcriptiona 96.4 0.00098 3.3E-08 49.6 1.3 47 36-87 26-72 (108)
314 3ech_A MEXR, multidrug resista 96.3 0.0079 2.7E-07 46.4 6.6 95 9-111 6-105 (142)
315 1mkm_A ICLR transcriptional re 96.3 0.0024 8.3E-08 54.8 3.8 58 38-108 11-68 (249)
316 2jsc_A Transcriptional regulat 96.3 0.0015 5E-08 49.4 2.1 53 30-87 16-68 (118)
317 2xrn_A HTH-type transcriptiona 96.3 0.0017 5.8E-08 55.5 2.8 61 38-110 9-69 (241)
318 2o0y_A Transcriptional regulat 96.3 0.0031 1.1E-07 54.5 4.4 58 38-108 26-83 (260)
319 2jt1_A PEFI protein; solution 96.3 0.0021 7.2E-08 44.7 2.5 37 48-87 22-58 (77)
320 2g7u_A Transcriptional regulat 96.3 0.0037 1.2E-07 53.9 4.6 60 38-111 17-76 (257)
321 1qbj_A Protein (double-strande 96.3 0.0048 1.7E-07 43.3 4.4 61 37-108 12-74 (81)
322 3iei_A Leucine carboxyl methyl 96.2 0.18 6.3E-06 45.0 15.8 104 196-303 90-235 (334)
323 3df8_A Possible HXLR family tr 96.2 0.003 1E-07 47.1 3.3 73 17-111 18-93 (111)
324 1oyi_A Double-stranded RNA-bin 96.1 0.0039 1.3E-07 43.7 3.3 59 36-107 18-76 (82)
325 1ub9_A Hypothetical protein PH 96.1 0.0026 8.8E-08 46.0 2.4 71 30-108 11-81 (100)
326 2ia2_A Putative transcriptiona 96.1 0.0037 1.3E-07 54.2 3.7 57 38-108 24-80 (265)
327 1r1t_A Transcriptional repress 96.0 0.004 1.4E-07 47.3 3.3 52 31-87 42-93 (122)
328 1xn7_A Hypothetical protein YH 96.0 0.0049 1.7E-07 42.9 3.3 44 40-87 7-50 (78)
329 2fu4_A Ferric uptake regulatio 96.0 0.0039 1.3E-07 43.7 2.7 48 37-87 19-72 (83)
330 3bdd_A Regulatory protein MARR 95.9 0.026 8.9E-07 43.1 7.6 67 37-111 33-99 (142)
331 2hzt_A Putative HTH-type trans 95.9 0.0089 3.1E-07 44.1 4.5 56 49-111 26-82 (107)
332 2y75_A HTH-type transcriptiona 95.9 0.011 3.6E-07 45.2 5.0 49 48-107 24-72 (129)
333 4g6q_A Putative uncharacterize 95.9 0.018 6.3E-07 46.8 6.7 54 29-87 17-71 (182)
334 4a5n_A Uncharacterized HTH-typ 95.8 0.028 9.6E-07 43.2 7.2 79 15-111 15-94 (131)
335 1on2_A Transcriptional regulat 95.8 0.0075 2.6E-07 46.7 3.8 50 49-111 21-70 (142)
336 2k02_A Ferrous iron transport 95.8 0.0047 1.6E-07 43.9 2.4 44 40-87 7-50 (87)
337 3fm5_A Transcriptional regulat 95.7 0.013 4.6E-07 45.5 5.3 69 36-111 40-108 (150)
338 2qww_A Transcriptional regulat 95.7 0.019 6.7E-07 44.7 6.2 67 37-111 43-111 (154)
339 2wte_A CSA3; antiviral protein 95.7 0.0063 2.2E-07 52.1 3.3 62 37-111 154-215 (244)
340 1r7j_A Conserved hypothetical 95.6 0.013 4.4E-07 42.4 4.4 54 41-111 14-67 (95)
341 2htj_A P fimbrial regulatory p 95.6 0.007 2.4E-07 42.2 2.9 44 39-86 4-47 (81)
342 1i4w_A Mitochondrial replicati 95.6 0.028 9.7E-07 50.7 7.5 83 197-279 59-165 (353)
343 1yyv_A Putative transcriptiona 95.6 0.01 3.5E-07 45.7 3.9 79 15-111 24-103 (131)
344 3ufb_A Type I restriction-modi 95.5 0.077 2.6E-06 50.5 10.6 104 195-298 216-363 (530)
345 1z7u_A Hypothetical protein EF 95.4 0.0093 3.2E-07 44.4 3.2 79 15-111 11-90 (112)
346 2lnb_A Z-DNA-binding protein 1 95.4 0.0092 3.1E-07 40.8 2.8 55 37-104 21-75 (80)
347 3kp7_A Transcriptional regulat 95.4 0.054 1.8E-06 42.0 7.7 67 37-111 40-107 (151)
348 3lwf_A LIN1550 protein, putati 95.4 0.021 7.1E-07 45.5 5.2 48 49-107 43-90 (159)
349 3r0a_A Putative transcriptiona 95.4 0.0072 2.5E-07 45.9 2.4 48 37-87 28-76 (123)
350 2gxg_A 146AA long hypothetical 95.4 0.027 9.4E-07 43.3 5.8 66 37-111 39-104 (146)
351 4fzv_A Putative methyltransfer 95.3 0.052 1.8E-06 49.1 8.3 101 194-297 146-284 (359)
352 1s3j_A YUSO protein; structura 95.3 0.035 1.2E-06 43.2 6.5 66 38-111 40-105 (155)
353 2f2e_A PA1607; transcription f 95.3 0.016 5.4E-07 45.4 4.1 75 18-111 16-90 (146)
354 1tbx_A ORF F-93, hypothetical 95.3 0.012 4.2E-07 42.5 3.3 63 38-111 11-77 (99)
355 1ylf_A RRF2 family protein; st 95.2 0.018 6.1E-07 45.3 4.2 73 30-125 15-87 (149)
356 3k0l_A Repressor protein; heli 95.2 0.02 6.8E-07 45.2 4.6 67 37-111 48-114 (162)
357 2zig_A TTHA0409, putative modi 95.2 0.039 1.3E-06 48.4 6.9 41 195-237 234-275 (297)
358 3nrv_A Putative transcriptiona 95.1 0.013 4.3E-07 45.5 3.1 68 36-111 41-108 (148)
359 3t8r_A Staphylococcus aureus C 95.1 0.025 8.5E-07 44.1 4.7 49 49-108 27-75 (143)
360 3s2w_A Transcriptional regulat 95.1 0.052 1.8E-06 42.5 6.7 66 38-111 53-118 (159)
361 2nyx_A Probable transcriptiona 95.0 0.042 1.5E-06 43.6 6.2 67 37-111 47-113 (168)
362 3bja_A Transcriptional regulat 95.0 0.013 4.3E-07 44.8 2.8 67 37-111 35-101 (139)
363 2nnn_A Probable transcriptiona 95.0 0.012 4E-07 45.1 2.6 67 37-111 40-106 (140)
364 2x4h_A Hypothetical protein SS 95.0 0.022 7.4E-07 43.8 4.1 49 48-110 29-77 (139)
365 1xd7_A YWNA; structural genomi 95.0 0.028 9.6E-07 43.9 4.8 72 29-125 9-80 (145)
366 3k69_A Putative transcription 95.0 0.034 1.2E-06 44.4 5.3 74 30-125 13-86 (162)
367 3bpv_A Transcriptional regulat 94.9 0.015 5.1E-07 44.3 3.1 64 37-111 31-97 (138)
368 2fsw_A PG_0823 protein; alpha- 94.9 0.017 5.7E-07 42.6 3.2 79 15-111 14-93 (107)
369 3bro_A Transcriptional regulat 94.9 0.021 7.2E-07 43.7 3.9 68 37-111 36-104 (141)
370 2lkp_A Transcriptional regulat 94.9 0.015 5.2E-07 43.5 3.0 49 34-87 31-79 (119)
371 3eco_A MEPR; mutlidrug efflux 94.8 0.015 5.2E-07 44.5 2.9 68 37-111 33-101 (139)
372 3oop_A LIN2960 protein; protei 94.8 0.013 4.6E-07 45.1 2.6 67 37-111 39-105 (143)
373 3boq_A Transcriptional regulat 94.8 0.032 1.1E-06 43.7 4.9 68 37-111 49-116 (160)
374 4aik_A Transcriptional regulat 94.8 0.026 9E-07 44.2 4.3 64 38-111 34-100 (151)
375 3hsr_A HTH-type transcriptiona 94.8 0.095 3.2E-06 40.1 7.5 67 37-111 38-104 (140)
376 1jgs_A Multiple antibiotic res 94.8 0.016 5.5E-07 44.2 3.0 67 37-111 36-102 (138)
377 3deu_A Transcriptional regulat 94.8 0.015 5.2E-07 46.3 2.9 68 37-111 55-122 (166)
378 2fa5_A Transcriptional regulat 94.8 0.031 1E-06 43.9 4.7 67 37-111 51-117 (162)
379 3bj6_A Transcriptional regulat 94.8 0.015 5.2E-07 45.2 2.7 67 37-111 42-108 (152)
380 3e6m_A MARR family transcripti 94.7 0.066 2.2E-06 42.1 6.5 67 37-111 55-121 (161)
381 2zkz_A Transcriptional repress 94.7 0.0098 3.4E-07 43.2 1.4 51 32-87 24-74 (99)
382 2pg4_A Uncharacterized protein 94.7 0.015 5.2E-07 41.7 2.4 62 41-111 21-83 (95)
383 2fbh_A Transcriptional regulat 94.7 0.03 1E-06 43.0 4.3 67 37-111 39-106 (146)
384 3jw4_A Transcriptional regulat 94.7 0.029 1E-06 43.4 4.2 68 37-111 43-111 (148)
385 2rdp_A Putative transcriptiona 94.6 0.018 6.2E-07 44.6 2.9 67 37-111 44-110 (150)
386 3g3z_A NMB1585, transcriptiona 94.6 0.033 1.1E-06 42.9 4.4 67 37-111 33-99 (145)
387 2hr3_A Probable transcriptiona 94.5 0.035 1.2E-06 42.7 4.4 70 35-111 35-104 (147)
388 2qvo_A Uncharacterized protein 94.5 0.037 1.3E-06 39.6 4.1 52 50-111 30-81 (95)
389 1lj9_A Transcriptional regulat 94.5 0.024 8.1E-07 43.6 3.2 67 37-111 31-97 (144)
390 3cdh_A Transcriptional regulat 94.4 0.035 1.2E-06 43.3 4.2 67 37-111 45-111 (155)
391 3f3x_A Transcriptional regulat 94.4 0.12 4E-06 39.6 7.1 64 36-111 38-104 (144)
392 2h09_A Transcriptional regulat 94.4 0.043 1.5E-06 43.0 4.6 50 49-111 53-102 (155)
393 2vz8_A Fatty acid synthase; tr 94.4 0.013 4.4E-07 65.6 2.0 97 197-298 1241-1349(2512)
394 3cjn_A Transcriptional regulat 94.4 0.021 7.3E-07 44.9 2.8 67 37-111 54-120 (162)
395 2eth_A Transcriptional regulat 94.3 0.027 9.1E-07 44.0 3.3 67 37-111 46-112 (154)
396 3hrs_A Metalloregulator SCAR; 94.3 0.062 2.1E-06 44.8 5.7 51 48-111 18-68 (214)
397 1sfx_A Conserved hypothetical 94.3 0.022 7.4E-07 41.4 2.5 47 37-87 22-68 (109)
398 2qlz_A Transcription factor PF 94.1 0.012 4.1E-07 49.9 0.8 52 29-85 6-57 (232)
399 2a61_A Transcriptional regulat 94.1 0.029 1E-06 43.1 3.0 67 37-111 35-101 (145)
400 1z91_A Organic hydroperoxide r 94.1 0.057 2E-06 41.5 4.7 68 37-112 42-109 (147)
401 4hbl_A Transcriptional regulat 94.0 0.084 2.9E-06 40.9 5.6 67 37-111 43-109 (149)
402 1bja_A Transcription regulator 94.0 0.039 1.3E-06 39.7 3.3 60 37-111 18-78 (95)
403 2obp_A Putative DNA-binding pr 94.0 0.096 3.3E-06 37.8 5.3 54 48-110 34-87 (96)
404 2zwa_A Leucine carboxyl methyl 94.0 0.54 1.9E-05 46.2 12.5 102 196-302 107-259 (695)
405 1q1h_A TFE, transcription fact 93.9 0.022 7.6E-07 42.0 1.9 46 38-86 21-66 (110)
406 2pex_A Transcriptional regulat 93.9 0.039 1.3E-06 42.9 3.3 68 37-112 49-116 (153)
407 3tgn_A ADC operon repressor AD 93.8 0.05 1.7E-06 41.8 3.9 67 36-111 39-105 (146)
408 3r24_A NSP16, 2'-O-methyl tran 93.8 0.1 3.6E-06 45.5 6.1 91 194-295 107-215 (344)
409 2bv6_A MGRA, HTH-type transcri 93.8 0.035 1.2E-06 42.5 3.0 67 37-111 39-105 (142)
410 2fe3_A Peroxide operon regulat 93.8 0.066 2.2E-06 41.7 4.5 50 35-87 22-76 (145)
411 3u2r_A Regulatory protein MARR 93.7 0.089 3E-06 41.6 5.3 65 37-111 48-116 (168)
412 2frh_A SARA, staphylococcal ac 93.5 0.06 2E-06 40.7 3.8 68 37-111 39-107 (127)
413 2o03_A Probable zinc uptake re 93.5 0.04 1.4E-06 42.2 2.8 51 34-87 10-65 (131)
414 2fbi_A Probable transcriptiona 93.5 0.034 1.2E-06 42.4 2.4 67 37-111 38-104 (142)
415 1uly_A Hypothetical protein PH 93.5 0.065 2.2E-06 43.9 4.1 52 30-86 15-66 (192)
416 2p4w_A Transcriptional regulat 93.3 0.045 1.6E-06 45.3 3.0 53 30-87 10-62 (202)
417 1p6r_A Penicillinase repressor 93.3 0.041 1.4E-06 38.2 2.3 50 37-87 11-61 (82)
418 3u1d_A Uncharacterized protein 93.1 0.69 2.4E-05 36.1 9.3 71 37-110 31-104 (151)
419 2pn6_A ST1022, 150AA long hypo 93.1 0.055 1.9E-06 42.2 3.0 46 37-86 5-50 (150)
420 3nqo_A MARR-family transcripti 92.9 0.058 2E-06 43.8 3.0 71 35-112 41-112 (189)
421 2w25_A Probable transcriptiona 92.8 0.07 2.4E-06 41.6 3.3 47 37-87 9-55 (150)
422 2fbk_A Transcriptional regulat 92.8 0.027 9.4E-07 45.4 0.8 68 37-111 71-140 (181)
423 2cfx_A HTH-type transcriptiona 92.7 0.071 2.4E-06 41.3 3.2 46 37-86 7-52 (144)
424 3mwm_A ZUR, putative metal upt 92.6 0.11 3.9E-06 40.1 4.2 51 34-87 13-68 (139)
425 1ku9_A Hypothetical protein MJ 92.5 0.29 9.8E-06 37.4 6.5 45 40-87 31-75 (152)
426 2d1h_A ST1889, 109AA long hypo 92.5 0.1 3.5E-06 37.7 3.6 36 49-87 35-70 (109)
427 2p5v_A Transcriptional regulat 92.3 0.083 2.9E-06 41.8 3.2 47 37-87 12-58 (162)
428 2k4b_A Transcriptional regulat 92.2 0.038 1.3E-06 40.2 0.9 50 37-87 37-87 (99)
429 2xvc_A ESCRT-III, SSO0910; cel 92.1 0.065 2.2E-06 34.2 1.8 47 37-86 12-58 (59)
430 1okr_A MECI, methicillin resis 92.1 0.044 1.5E-06 41.0 1.2 46 38-87 13-62 (123)
431 2fxa_A Protease production reg 92.1 0.066 2.3E-06 44.3 2.3 67 37-111 50-116 (207)
432 2xig_A Ferric uptake regulatio 92.0 0.12 4E-06 40.6 3.6 51 34-87 26-81 (150)
433 1mzb_A Ferric uptake regulatio 92.0 0.093 3.2E-06 40.4 2.9 49 36-87 19-73 (136)
434 4b8x_A SCO5413, possible MARR- 91.9 0.12 4E-06 40.1 3.5 62 40-111 40-105 (147)
435 1j5y_A Transcriptional regulat 91.9 0.11 3.8E-06 42.2 3.4 57 36-106 22-79 (187)
436 2cg4_A Regulatory protein ASNC 91.8 0.094 3.2E-06 41.0 2.9 46 37-86 10-55 (152)
437 4fx0_A Probable transcriptiona 91.8 0.14 4.8E-06 39.8 3.8 54 49-110 51-104 (148)
438 2cyy_A Putative HTH-type trans 91.7 0.08 2.7E-06 41.4 2.4 46 37-86 9-54 (151)
439 2dbb_A Putative HTH-type trans 91.7 0.1 3.5E-06 40.6 3.0 46 37-86 11-56 (151)
440 3i4p_A Transcriptional regulat 91.6 0.11 3.6E-06 41.3 3.0 47 36-86 4-50 (162)
441 1v4r_A Transcriptional repress 91.6 0.19 6.4E-06 36.4 4.1 54 30-87 14-69 (102)
442 2ia0_A Putative HTH-type trans 91.4 0.12 4.2E-06 41.4 3.2 46 37-86 19-64 (171)
443 2e1c_A Putative HTH-type trans 91.0 0.12 3.9E-06 41.5 2.6 47 36-86 28-74 (171)
444 1i1g_A Transcriptional regulat 90.9 0.11 3.7E-06 39.9 2.3 46 37-86 6-51 (141)
445 1sfu_A 34L protein; protein/Z- 90.8 0.34 1.2E-05 33.0 4.4 43 41-87 21-63 (75)
446 3k2z_A LEXA repressor; winged 90.7 0.13 4.5E-06 42.1 2.8 40 45-87 19-58 (196)
447 1p4x_A Staphylococcal accessor 90.5 0.18 6E-06 43.2 3.5 65 37-111 160-228 (250)
448 1zkd_A DUF185; NESG, RPR58, st 90.5 0.87 3E-05 41.4 8.2 65 164-234 54-125 (387)
449 2g9w_A Conserved hypothetical 90.2 0.15 5.2E-06 39.1 2.6 48 37-87 11-62 (138)
450 2oo3_A Protein involved in cat 90.2 1.3 4.6E-05 38.3 8.8 155 137-301 26-202 (283)
451 3g7u_A Cytosine-specific methy 90.0 2 7E-05 38.8 10.3 96 198-300 3-121 (376)
452 1g60_A Adenine-specific methyl 89.9 0.44 1.5E-05 40.7 5.6 41 195-237 211-252 (260)
453 2w57_A Ferric uptake regulatio 89.8 0.14 4.8E-06 40.1 2.1 49 36-87 18-72 (150)
454 2dk5_A DNA-directed RNA polyme 89.4 0.16 5.6E-06 36.2 2.0 47 38-87 23-70 (91)
455 2vn2_A DNAD, chromosome replic 89.0 0.4 1.4E-05 36.3 4.1 36 49-87 50-85 (128)
456 2py6_A Methyltransferase FKBM; 89.0 0.64 2.2E-05 42.6 6.2 54 195-248 225-290 (409)
457 3cta_A Riboflavin kinase; stru 88.9 0.33 1.1E-05 40.7 3.9 53 49-111 26-78 (230)
458 3tos_A CALS11; methyltransfera 88.8 0.46 1.6E-05 40.7 4.8 97 195-298 68-218 (257)
459 2b0l_A GTP-sensing transcripti 88.6 0.58 2E-05 34.0 4.6 44 40-87 33-77 (102)
460 3i71_A Ethanolamine utilizatio 88.5 0.66 2.2E-05 29.6 4.1 44 49-106 17-60 (68)
461 1fx7_A Iron-dependent represso 88.2 0.46 1.6E-05 39.8 4.4 48 51-111 25-72 (230)
462 2qq9_A Diphtheria toxin repres 88.1 0.64 2.2E-05 38.8 5.2 49 50-111 24-72 (226)
463 1sd4_A Penicillinase repressor 88.0 0.18 6.3E-06 37.7 1.6 50 37-87 12-62 (126)
464 2pjp_A Selenocysteine-specific 87.9 0.56 1.9E-05 35.1 4.3 55 37-106 9-63 (121)
465 2esh_A Conserved hypothetical 87.6 0.85 2.9E-05 33.9 5.1 71 33-111 11-90 (118)
466 2hoe_A N-acetylglucosamine kin 86.7 0.33 1.1E-05 43.9 2.8 56 28-88 13-68 (380)
467 1bia_A BIRA bifunctional prote 86.4 0.51 1.8E-05 41.8 3.8 55 38-105 8-62 (321)
468 2p8t_A Hypothetical protein PH 86.4 0.87 3E-05 37.3 4.8 49 49-111 29-77 (200)
469 1jhg_A Trp operon repressor; c 86.0 0.5 1.7E-05 34.3 2.9 42 33-79 43-84 (101)
470 1g55_A DNA cytosine methyltran 86.0 2.6 8.9E-05 37.5 8.3 101 198-300 3-121 (343)
471 1cf7_A Protein (transcription 85.9 0.81 2.8E-05 31.3 3.8 37 49-87 29-65 (76)
472 3elk_A Putative transcriptiona 84.7 0.87 3E-05 33.9 3.8 74 31-111 10-89 (117)
473 3eyy_A Putative iron uptake re 84.6 0.38 1.3E-05 37.3 1.8 51 36-87 20-72 (145)
474 3rkx_A Biotin-[acetyl-COA-carb 84.5 0.5 1.7E-05 41.9 2.8 57 38-106 6-63 (323)
475 3iht_A S-adenosyl-L-methionine 84.4 4.3 0.00015 31.8 7.6 58 167-228 15-72 (174)
476 4esf_A PADR-like transcription 84.4 1.3 4.4E-05 32.9 4.6 69 35-110 11-85 (117)
477 3ggo_A Prephenate dehydrogenas 84.2 5.7 0.00019 34.8 9.5 84 197-286 33-120 (314)
478 1p4x_A Staphylococcal accessor 84.1 0.7 2.4E-05 39.4 3.4 65 37-111 36-104 (250)
479 1z6r_A MLC protein; transcript 83.4 0.87 3E-05 41.4 4.0 47 37-87 18-64 (406)
480 3tqn_A Transcriptional regulat 83.3 1.4 4.8E-05 32.3 4.4 50 31-87 17-67 (113)
481 2o0m_A Transcriptional regulat 83.0 0.24 8.1E-06 44.4 0.0 46 37-86 22-67 (345)
482 2vxz_A Pyrsv_GP04; viral prote 83.0 0.7 2.4E-05 35.8 2.6 45 39-88 15-59 (165)
483 1xma_A Predicted transcription 82.9 0.67 2.3E-05 36.0 2.6 72 33-111 39-118 (145)
484 3f8b_A Transcriptional regulat 82.9 1.7 5.9E-05 32.1 4.8 72 32-110 9-88 (116)
485 3l7w_A Putative uncharacterize 81.7 0.9 3.1E-05 33.1 2.8 65 36-110 10-80 (108)
486 4ets_A Ferric uptake regulatio 81.7 0.94 3.2E-05 35.8 3.1 52 36-87 34-89 (162)
487 1z05_A Transcriptional regulat 81.1 1 3.4E-05 41.4 3.5 52 32-87 36-87 (429)
488 2v79_A DNA replication protein 81.0 1.2 4.2E-05 34.0 3.4 36 49-87 50-85 (135)
489 2ek5_A Predicted transcription 80.8 2.3 7.9E-05 32.1 4.9 50 31-87 12-62 (129)
490 1yg2_A Gene activator APHA; vi 80.8 1.3 4.5E-05 35.4 3.7 66 37-109 4-77 (179)
491 2qlz_A Transcription factor PF 80.8 2.3 7.9E-05 35.7 5.4 44 39-87 169-212 (232)
492 3e6c_C CPRK, cyclic nucleotide 80.6 2.5 8.6E-05 35.1 5.7 36 49-87 176-211 (250)
493 1hsj_A Fusion protein consisti 79.9 0.86 2.9E-05 42.4 2.6 67 38-111 407-474 (487)
494 2w48_A Sorbitol operon regulat 78.6 1.8 6.2E-05 38.0 4.2 36 49-87 20-56 (315)
495 3ke2_A Uncharacterized protein 78.5 2.7 9.4E-05 30.9 4.3 52 49-107 33-84 (117)
496 3by6_A Predicted transcription 78.1 3.8 0.00013 30.7 5.4 51 30-87 18-69 (126)
497 2c7p_A Modification methylase 78.0 8.6 0.00029 33.9 8.5 94 197-300 11-122 (327)
498 2yu3_A DNA-directed RNA polyme 77.7 1 3.5E-05 32.2 1.9 48 37-87 39-87 (95)
499 3maj_A DNA processing chain A; 77.5 1.4 4.8E-05 39.9 3.1 46 37-87 330-375 (382)
500 3hhh_A Transcriptional regulat 77.1 2.1 7.3E-05 31.6 3.6 69 35-110 13-87 (116)
No 1
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=100.00 E-value=1.9e-50 Score=371.60 Aligned_cols=276 Identities=21% Similarity=0.360 Sum_probs=248.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCC
Q 021867 14 EAQAHVWNHIFNFINSMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRN 93 (306)
Q Consensus 14 ~~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~ 93 (306)
++...|+++++||+.+++|++|++|||||.|.+.++|+|++|||+++|+ +++.++|+||+|++.|+|++..+
T Consensus 7 ~~~~~L~~l~~Gf~~s~~L~aa~eLglfd~L~~~~~p~t~~eLA~~~g~---~~~~l~rlLr~L~~~gll~~~~~----- 78 (353)
T 4a6d_A 7 QAYRLLNDYANGFMVSQVLFAACELGVFDLLAEAPGPLDVAAVAAGVRA---SAHGTELLLDICVSLKLLKVETR----- 78 (353)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHSSSCBCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEEE-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHhcCCCCCCHHHHHHhhCc---CHHHHHHHHHHHHHCCCEEEecc-----
Confidence 5667789999999999999999999999999876689999999999999 78999999999999999987653
Q ss_pred CCCCCCceecChhch-hhhcCCCCChHHHHHHhcCccchhhhhhHHHHhhcCCCChhhhhcC---CCccccccCCchHHH
Q 021867 94 NNDEEQGYVLKNASK-LLLKDNPLSVTPFLQAMLDPILLSPWLKLSTWFQNDDPTPFDTLHG---KSFWVYAGDEPKINN 169 (306)
Q Consensus 94 ~~~~~~~y~~t~~s~-~l~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g---~~~~e~~~~~~~~~~ 169 (306)
++.+.|++|+.++ +|.+++|.++..++.+.. +..+..|..|++++++++ ++|...+| .++|+++.++|+...
T Consensus 79 --~~~~~y~~t~~s~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~L~~~vr~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~ 154 (353)
T 4a6d_A 79 --GGKAFYRNTELSSDYLTTVSPTSQCSMLKYMG-RTSYRCWGHLADAVREGR-NQYLETFGVPAEELFTAIYRSEGERL 154 (353)
T ss_dssp --TTEEEEEECHHHHHHHSTTSTTCCHHHHHHHH-HTHHHHHTTHHHHHHHTS-CCHHHHHSCCCSSHHHHHTSSHHHHH
T ss_pred --CccceeeCCHHHHHHhhcCCchHHHHHHHHhC-HHHHHHHHHHHHHHhcCC-ChhHHhcCCChHHHHHHHhhCHHHHH
Confidence 2356899999887 677788889998887764 457889999999999997 67888877 467889999999999
Q ss_pred HHHHHHHhchhhhHHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchh-----cCCCeEE
Q 021867 170 FFNEAMASDARLATRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLES-----DLANLKY 244 (306)
Q Consensus 170 ~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~-----~~~rv~~ 244 (306)
.|.++|...+....+.+++.++ +++..+|||||||+|.++..++++||+++++++|+|++++.|++ ..+||++
T Consensus 155 ~f~~aM~~~~~~~~~~~~~~~~--~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~ 232 (353)
T 4a6d_A 155 QFMQALQEVWSVNGRSVLTAFD--LSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDF 232 (353)
T ss_dssp HHHHHHHTTHHHHHHHHHHSSC--GGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--CCSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcC--cccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcccCceee
Confidence 9999999998888888999999 88889999999999999999999999999999999999999887 4689999
Q ss_pred EeccCCC-CCCCccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCCCCCC
Q 021867 245 VGGDMFE-AIPPADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENKKRG 306 (306)
Q Consensus 245 ~~~d~~~-~~p~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~~~~g 306 (306)
+++||++ +.|++|+|++++|||+|+|++|++||++++++|+| ||+|+|+|.++++++++
T Consensus 233 ~~gD~~~~~~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~p---gg~lli~e~~~~~~~~~ 292 (353)
T 4a6d_A 233 QEGDFFKDPLPEADLYILARVLHDWADGKCSHLLERIYHTCKP---GGGILVIESLLDEDRRG 292 (353)
T ss_dssp EESCTTTSCCCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCT---TCEEEEEECCCCTTSCC
T ss_pred ecCccccCCCCCceEEEeeeecccCCHHHHHHHHHHHHhhCCC---CCEEEEEEeeeCCCCCC
Confidence 9999998 56789999999999999999999999999999999 99999999999987653
No 2
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=100.00 E-value=2.4e-47 Score=352.30 Aligned_cols=287 Identities=31% Similarity=0.592 Sum_probs=252.7
Q ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccCC-CCCCHHHHHHhcCC--CCCCcchHHHHHHHHHHcCcee
Q 021867 8 HDTELLEAQAHVWNHIFNFINSMSLKCAVELGIPDIINKHG-KPMTLNELVSALTI--NPSKTRCVYRLMRILIHSGFFA 84 (306)
Q Consensus 8 ~~~~~~~~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~-~~~t~~eLA~~~g~--~~~~~~~l~rlLr~L~~~g~l~ 84 (306)
+..+..++...+++++++++.+++|++|+++|||++|.+++ +|+|++|||+++|+ +|.++..++||||+|++.|+|+
T Consensus 13 ~~~~~~~~~~~~~~l~~~~~~~~~l~~a~~Lgifd~L~~~g~~~~t~~eLA~~~g~~~~~~~~~~l~rlLr~L~~~g~l~ 92 (364)
T 3p9c_A 13 AASADEDACMFALQLASSSVLPMTLKNAIELGLLEILVAAGGKSLTPTEVAAKLPSAANPEAPDMVDRILRLLASYNVVT 92 (364)
T ss_dssp CHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHTHHHHHHHTTTCCBCHHHHHHTTTCTTCTTHHHHHHHHHHHHHHTTSEE
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHHHHHHHCChHHHHhhcCCCCCCHHHHHHhcCCCCCccchhhHHHHHHHHHhCCCEE
Confidence 35567778999999999999999999999999999998754 69999999999997 5423349999999999999999
Q ss_pred eecccCCCCCCCC--CCceecChhchhhhcC-CCCChHHHHHHhcCccchhhhhhHHHHhhcCCCChhhhhcCCCccccc
Q 021867 85 QQTLNSSRNNNDE--EQGYVLKNASKLLLKD-NPLSVTPFLQAMLDPILLSPWLKLSTWFQNDDPTPFDTLHGKSFWVYA 161 (306)
Q Consensus 85 ~~~~~~~~~~~~~--~~~y~~t~~s~~l~~~-~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~e~~ 161 (306)
+..... +.+ +++|++|+.++.|..+ .+.++++++.+..++.++..|.+|+++++++. +||+..+|.++|+|+
T Consensus 93 ~~~~~~----~~g~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~r~g~-~~~~~~~g~~~~~~~ 167 (364)
T 3p9c_A 93 CLVEEG----KDGRLSRSYGAAPVCKFLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGG-IPFNKAYGMSAFEYH 167 (364)
T ss_dssp EEEEEC----SSSCEEEEEEECGGGGGSSCCTTSCCTHHHHHHHTSHHHHGGGGGHHHHHHHCS-CHHHHHHSSCHHHHH
T ss_pred Eecccc----CCCCcCCEEecCHHHHHHcCCCCCCCHHHHHHHhcCHHHHHHHhCHHHHHhhCC-ChHHHhcCCCHHHHH
Confidence 873100 001 3689999999988765 46789999887766778899999999999987 899999999999999
Q ss_pred cCCchHHHHHHHHHHhchhhhHHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchhcCCC
Q 021867 162 GDEPKINNFFNEAMASDARLATRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLAN 241 (306)
Q Consensus 162 ~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~~~~r 241 (306)
.++|+..+.|.++|...+......+++.++ .+++..+|||||||+|.++..+++++|+++++++|+|.+++.++ ..+|
T Consensus 168 ~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~-~~~~ 245 (364)
T 3p9c_A 168 GTDPRFNRVFNEGMKNHSIIITKKLLELYH-GFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAP-QFPG 245 (364)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHCC-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCC-CCTT
T ss_pred HhCHHHHHHHHHHHHHhhHHHHHHHHHhcc-cccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhh-hcCC
Confidence 999999999999999988777777888776 25678999999999999999999999999999999999999988 4689
Q ss_pred eEEEeccCCCCCCCccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCCCC
Q 021867 242 LKYVGGDMFEAIPPADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENKK 304 (306)
Q Consensus 242 v~~~~~d~~~~~p~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~~~ 304 (306)
|+|+.+|+++++|..|+|+++++||+|+++++.++|++++++|+| ||+|+|+|.++++..
T Consensus 246 v~~~~~D~~~~~p~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~p---gG~l~i~e~~~~~~~ 305 (364)
T 3p9c_A 246 VTHVGGDMFKEVPSGDTILMKWILHDWSDQHCATLLKNCYDALPA---HGKVVLVQCILPVNP 305 (364)
T ss_dssp EEEEECCTTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCT---TCEEEEEECCBCSSC
T ss_pred eEEEeCCcCCCCCCCCEEEehHHhccCCHHHHHHHHHHHHHHcCC---CCEEEEEEeccCCCC
Confidence 999999999988867999999999999999999999999999999 999999999998754
No 3
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=100.00 E-value=1.2e-46 Score=346.22 Aligned_cols=292 Identities=51% Similarity=0.888 Sum_probs=256.1
Q ss_pred CcCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcC
Q 021867 2 NLIDGEHDTELLEAQAHVWNHIFNFINSMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSG 81 (306)
Q Consensus 2 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g 81 (306)
|+||..++++++++...+++++.+++.+++|++++++|||+.|+.+++|.|++|||+++|++|.+++.++||||+|++.|
T Consensus 3 ~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~l~~a~~lgif~~L~~~~~~~t~~ela~~~~~~~~~~~~l~rlLr~L~~~g 82 (352)
T 1fp2_A 3 SSINGRKPSEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVRRLMRYLAHNG 82 (352)
T ss_dssp -----CCSTHHHHHHHHHHHHHTTHHHHHHHHHHHHTTHHHHHHHHTSCEEHHHHHHHHTCCGGGHHHHHHHHHHHHHTT
T ss_pred ccccCCChHHHhhHHHHHHHHHHHHHHHHHHHHHHHCChhhhhhhcCCCccHHHHHHHhCcCCCChHHHHHHHHHHHhCC
Confidence 79999999999999999999999999999999999999999998744599999999999996555789999999999999
Q ss_pred ceeeecccCCCCCCCCCCceecChhchhhhcCCCCChHHHHHHhcCccchhhhhhHHHHhh-cCCCChhhhhcCCCcccc
Q 021867 82 FFAQQTLNSSRNNNDEEQGYVLKNASKLLLKDNPLSVTPFLQAMLDPILLSPWLKLSTWFQ-NDDPTPFDTLHGKSFWVY 160 (306)
Q Consensus 82 ~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~~~~~g~~~~e~ 160 (306)
+|++.. ++++.|++|+.++.|++++|.++++++.+..++.+++.|.+|+++++ ++. ++|+..+|.++|+|
T Consensus 83 ll~~~~--------~~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~g~-~~~~~~~g~~~~~~ 153 (352)
T 1fp2_A 83 FFEIIT--------KEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEEDL-TLFGVTLGSGFWDF 153 (352)
T ss_dssp SEEEEE--------SSSEEEEECHHHHTTSTTSSSCCHHHHHHHTCHHHHHGGGGHHHHHTCSSC-CHHHHHHSSCHHHH
T ss_pred eEEEec--------CCCCeEeCCHHHHHHhCCCCccHHHHHHHhcCchHHHHHHHHHHHHHhcCC-ChHHHHcCCCHHHH
Confidence 999872 01589999999999998888889999888766667889999999999 665 88999999999999
Q ss_pred ccCCchHHHHHHHHHHhchhhhHHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchhcCC
Q 021867 161 AGDEPKINNFFNEAMASDARLATRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLA 240 (306)
Q Consensus 161 ~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~~~~ 240 (306)
+.++|+..+.|..+|........+. ++.+++.+++..+|||||||+|.++..+++++|+++++++|+|.+++.+++ .+
T Consensus 154 ~~~~~~~~~~f~~~m~~~~~~~~~~-~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-~~ 231 (352)
T 1fp2_A 154 LDKNPEYNTSFNDAMASDSKLINLA-LRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSG-SN 231 (352)
T ss_dssp HHHCHHHHHHHHHHHHHTHHHHHHH-HHTCHHHHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCC-BT
T ss_pred HHhChHHHHHHHHHHHhcchhhhhH-HHhcccccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeCHHHHhhccc-CC
Confidence 9999999999999999888766666 777732377889999999999999999999999999999999999999885 45
Q ss_pred CeEEEeccCCCCCCCccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCCCC
Q 021867 241 NLKYVGGDMFEAIPPADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENKK 304 (306)
Q Consensus 241 rv~~~~~d~~~~~p~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~~~ 304 (306)
+|+++.+|+++++|.||+|+++++||+|+|+++.++|++++++|+|.++||+|+|+|.+.++..
T Consensus 232 ~v~~~~~d~~~~~p~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~ 295 (352)
T 1fp2_A 232 NLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKK 295 (352)
T ss_dssp TEEEEECCTTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTT
T ss_pred CcEEEeccccCCCCCccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCC
Confidence 6999999999988889999999999999999999999999999997111699999999988754
No 4
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=100.00 E-value=4.4e-46 Score=341.92 Aligned_cols=273 Identities=22% Similarity=0.432 Sum_probs=249.0
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecc
Q 021867 9 DTELLEAQAHVWNHIFNFINSMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTL 88 (306)
Q Consensus 9 ~~~~~~~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~ 88 (306)
+....++...+++++.|++.+++|++|+++|||+.|.+ +|+|++|||+++|+ +++.++||||+|++.|+|++ .
T Consensus 16 ~~~~~~~~~~l~~~~~~~~~~~~l~~a~~lglf~~l~~--g~~t~~elA~~~g~---~~~~l~rlLr~l~~~g~l~~-~- 88 (348)
T 3lst_A 16 DMDRLQSALALYEEAMGYTYAAALRAAAAVGVADHLVD--GPRTPAELAAATGT---DADALRRVLRLLAVRDVVRE-S- 88 (348)
T ss_dssp CCCHHHHHHHHHHHHTTHHHHHHHHHHHHHTGGGGGTT--SCBCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEE-E-
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhC--CCCCHHHHHHHhCc---CHHHHHHHHHHHHhCCCEEe-c-
Confidence 44556788999999999999999999999999999985 79999999999999 78999999999999999999 4
Q ss_pred cCCCCCCCCCCceecChhchhhhcCCCCChHHHHHHhcCccchhhhhhHHHHhhcCCCChhhhhcCCCccccccCCchHH
Q 021867 89 NSSRNNNDEEQGYVLKNASKLLLKDNPLSVTPFLQAMLDPILLSPWLKLSTWFQNDDPTPFDTLHGKSFWVYAGDEPKIN 168 (306)
Q Consensus 89 ~~~~~~~~~~~~y~~t~~s~~l~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~e~~~~~~~~~ 168 (306)
+++|++|+.++.|.++++.++.+++.+..++..++.|.+|+++++++. ++|+..+|.++|+|+.++|+..
T Consensus 89 ---------~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~~~~~ 158 (348)
T 3lst_A 89 ---------DGRFALTDKGAALRSDSPVPARAGILMFTDTMFWTMSHRVASALGPER-PAFADIFGSSLDAYFDGDAEVE 158 (348)
T ss_dssp ---------TTEEEECTTTGGGSTTSSSCSHHHHHHHTSHHHHHHHHTHHHHTCTTC-CCHHHHHSSCHHHHHTTCHHHH
T ss_pred ---------CCEEecCHHHHHHhcCCCccHHHHHHHhcCHHHHHHHHHHHHHHhcCC-ChhhHHhCCCHHHHHHhCHHHH
Confidence 589999999998888877889998887666657899999999999887 6799899999999999999999
Q ss_pred HHHHHHHHhchhhhHHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchh----cCCCeEE
Q 021867 169 NFFNEAMASDARLATRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLES----DLANLKY 244 (306)
Q Consensus 169 ~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~----~~~rv~~ 244 (306)
+.|.++|...+....+.+++.++ +++..+|||||||+|.++..+++++|+++++++|+|.++..++. ..+||++
T Consensus 159 ~~f~~~m~~~~~~~~~~~~~~~~--~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~~~~~~~~~~~~v~~ 236 (348)
T 3lst_A 159 ALYYEGMETVSAAEHLILARAGD--FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKV 236 (348)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHSC--CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHTTCCCCCGGGTTSEEE
T ss_pred HHHHHHHHHhhhhhHHHHHHhCC--ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhhcccccccCCCCCeEE
Confidence 99999999998888888888888 78889999999999999999999999999999999988873321 4678999
Q ss_pred EeccCCCCCCCccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCCC
Q 021867 245 VGGDMFEAIPPADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENK 303 (306)
Q Consensus 245 ~~~d~~~~~p~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~~ 303 (306)
+.+|+++++|.||+|+++++||+|+|+++.++|++++++|+| ||+|+|+|.+.++.
T Consensus 237 ~~~d~~~~~p~~D~v~~~~vlh~~~d~~~~~~L~~~~~~Lkp---gG~l~i~e~~~~~~ 292 (348)
T 3lst_A 237 VEGDFLREVPHADVHVLKRILHNWGDEDSVRILTNCRRVMPA---HGRVLVIDAVVPEG 292 (348)
T ss_dssp EECCTTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHTCCT---TCEEEEEECCBCSS
T ss_pred EecCCCCCCCCCcEEEEehhccCCCHHHHHHHHHHHHHhcCC---CCEEEEEEeccCCC
Confidence 999999877899999999999999999999999999999999 99999999998875
No 5
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=100.00 E-value=4.8e-46 Score=344.09 Aligned_cols=284 Identities=32% Similarity=0.614 Sum_probs=249.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccC---CCCCCHHHHHHhcC-CCCCCcchHHHHHHHHHHcCceeee
Q 021867 11 ELLEAQAHVWNHIFNFINSMSLKCAVELGIPDIINKH---GKPMTLNELVSALT-INPSKTRCVYRLMRILIHSGFFAQQ 86 (306)
Q Consensus 11 ~~~~~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~---~~~~t~~eLA~~~g-~~~~~~~~l~rlLr~L~~~g~l~~~ 86 (306)
+..++...+++++.|++.+++|++|+++|||+.|.+. ++|+|++|||+++| .+|.+++.++||||+|++.|+|++.
T Consensus 17 ~~~~~~~~~~~l~~~~~~~~~l~~a~~Lglfd~L~~~~gp~~~~t~~eLA~~~~~~~~~~~~~l~rlLr~L~~~gll~~~ 96 (368)
T 3reo_A 17 SDEEANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTYT 96 (368)
T ss_dssp CHHHHHHHHHHHHTTTHHHHHHHHHHHTTHHHHHHHHCCTTCCBCHHHHHTTSSCCCTTHHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCchhHHhhcCCCCCCcCHHHHHHhcCcCCCcchhhHHHHHHHHHhCCCeEEe
Confidence 5667889999999999999999999999999999873 25799999999998 4442345999999999999999986
Q ss_pred cccCCCCCCCC--CCceecChhchhhhcC-CCCChHHHHHHhcCccchhhhhhHHHHhhcCCCChhhhhcCCCccccccC
Q 021867 87 TLNSSRNNNDE--EQGYVLKNASKLLLKD-NPLSVTPFLQAMLDPILLSPWLKLSTWFQNDDPTPFDTLHGKSFWVYAGD 163 (306)
Q Consensus 87 ~~~~~~~~~~~--~~~y~~t~~s~~l~~~-~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~e~~~~ 163 (306)
.... +++ +++|++|+.++.|..+ ++.++++++.+..++.++..|.+|+++++++. ++|+..+|.++|+|+.+
T Consensus 97 ~~~~----~~g~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~g~-~~~~~~~g~~~~~~~~~ 171 (368)
T 3reo_A 97 LREL----PSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLLATDKVLLEPWFYLKDAILEGG-IPFNKAYGMNIFDYHGT 171 (368)
T ss_dssp EEEC----TTSCEEEEEEECTTHHHHSCCTTSCCSHHHHHHHTCHHHHGGGGGHHHHHHHCS-CHHHHHSSSCHHHHHTT
T ss_pred cccC----CCCcccceeCcCHHHHHHhCCCCCCCHHHHHHHhcCHHHHhhhhchHHHHhcCC-CHHHHHhCCCHHHHHhh
Confidence 2000 001 2689999999987754 46789999887767778899999999999987 79999999999999999
Q ss_pred CchHHHHHHHHHHhchhhhHHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchhcCCCeE
Q 021867 164 EPKINNFFNEAMASDARLATRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLK 243 (306)
Q Consensus 164 ~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~~~~rv~ 243 (306)
+|+..+.|.++|...+......+++.++ .+++..+|||||||+|.++..+++++|+++++++|+|.+++.++ ..++|+
T Consensus 172 ~~~~~~~f~~~m~~~~~~~~~~~~~~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~-~~~~v~ 249 (368)
T 3reo_A 172 DHRINKVFNKGMSSNSTITMKKILEMYN-GFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAP-AFSGVE 249 (368)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTTCC-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCC-CCTTEE
T ss_pred CHHHHHHHHHHHHhhhhhHHHHHHHhcc-cccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHhhh-hcCCCE
Confidence 9999999999999988777788888776 25778999999999999999999999999999999999999988 458999
Q ss_pred EEeccCCCCCCCccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCCCC
Q 021867 244 YVGGDMFEAIPPADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENKK 304 (306)
Q Consensus 244 ~~~~d~~~~~p~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~~~ 304 (306)
|+.+|+++++|..|+|+++++||+|+++++.++|++++++|+| ||+|+|+|.++++..
T Consensus 250 ~~~~d~~~~~p~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~ 307 (368)
T 3reo_A 250 HLGGDMFDGVPKGDAIFIKWICHDWSDEHCLKLLKNCYAALPD---HGKVIVAEYILPPSP 307 (368)
T ss_dssp EEECCTTTCCCCCSEEEEESCGGGBCHHHHHHHHHHHHHHSCT---TCEEEEEECCCCSSC
T ss_pred EEecCCCCCCCCCCEEEEechhhcCCHHHHHHHHHHHHHHcCC---CCEEEEEEeccCCCC
Confidence 9999999988867999999999999999999999999999999 999999999988764
No 6
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=100.00 E-value=2.6e-45 Score=339.36 Aligned_cols=272 Identities=28% Similarity=0.510 Sum_probs=249.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCC
Q 021867 12 LLEAQAHVWNHIFNFINSMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSS 91 (306)
Q Consensus 12 ~~~~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~ 91 (306)
..+...+|++++.+++.+++|++|+++|||+.|++ +|+|++|||+++|+ +++.++||||+|++.|+|++.+
T Consensus 35 ~~~~~~~l~~l~~~~~~~~~l~~a~~lglf~~l~~--g~~t~~eLA~~~g~---~~~~l~rlLr~L~~~g~l~~~~---- 105 (369)
T 3gwz_A 35 RAAAEETVNDILQGAWKARAIHVAVELGVPELLQE--GPRTATALAEATGA---HEQTLRRLLRLLATVGVFDDLG---- 105 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGTT--SCEEHHHHHHHHTC---CHHHHHHHHHHHHHTTSSEECS----
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHCChhhhhcC--CCCCHHHHHHHHCc---CHHHHHHHHHHHHhCCCEEEeC----
Confidence 34668889999999999999999999999999985 79999999999999 7899999999999999999975
Q ss_pred CCCCCCCCc-eecChhchhhhcCCCCChHHHHHHhcCccchhhhhhHHHHhhcCCCChhhhhcCCCccccccCCchHHHH
Q 021867 92 RNNNDEEQG-YVLKNASKLLLKDNPLSVTPFLQAMLDPILLSPWLKLSTWFQNDDPTPFDTLHGKSFWVYAGDEPKINNF 170 (306)
Q Consensus 92 ~~~~~~~~~-y~~t~~s~~l~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~e~~~~~~~~~~~ 170 (306)
++. |.+|+.++.|.++++.++..++.+..++..+..|.+|.++++++. ++|...+|.++|+|+.++|+..+.
T Consensus 106 ------~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~~~~~~~ 178 (369)
T 3gwz_A 106 ------HDDLFAQNALSAVLLPDPASPVATDARFQAAPWHWRAWEQLTHSVRTGE-ASFDVANGTSFWQLTHEDPKAREL 178 (369)
T ss_dssp ------STTEEECCHHHHTTSCCTTCHHHHHHHHHHSHHHHHHHHTHHHHHHHSS-CSHHHHHSSCHHHHHHHCHHHHHH
T ss_pred ------CCceEecCHHHHHHhcCCchhHHHHHHHcCCHHHHHHHHhHHHHHhCCC-ChhHhhcCCCHHHHHHhCHHHHHH
Confidence 578 999999999888887788888887766556789999999999987 678888999999999999999999
Q ss_pred HHHHHHhchhhhHHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchh------cCCCeEE
Q 021867 171 FNEAMASDARLATRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLES------DLANLKY 244 (306)
Q Consensus 171 f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~------~~~rv~~ 244 (306)
|.++|........+.+++.++ +.+..+|||||||+|.++..+++++|+++++++|+|.+++.|++ ..+||+|
T Consensus 179 f~~~m~~~~~~~~~~l~~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~l~~~v~~ 256 (369)
T 3gwz_A 179 FNRAMGSVSLTEAGQVAAAYD--FSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLERPPVAEEARELLTGRGLADRCEI 256 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHHSC--CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEE
T ss_pred HHHHHHHHHhhhHHHHHHhCC--CccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcCHHHHHHHHHhhhhcCcCCceEE
Confidence 999999988877788888888 77889999999999999999999999999999999999999886 3689999
Q ss_pred EeccCCCCCC-CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCCCC
Q 021867 245 VGGDMFEAIP-PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENKK 304 (306)
Q Consensus 245 ~~~d~~~~~p-~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~~~ 304 (306)
+.+|+++++| +||+|+++++||+|+++++.++|++++++|+| ||+|+|+|.+.++..
T Consensus 257 ~~~d~~~~~p~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~p---gG~l~i~e~~~~~~~ 314 (369)
T 3gwz_A 257 LPGDFFETIPDGADVYLIKHVLHDWDDDDVVRILRRIATAMKP---DSRLLVIDNLIDERP 314 (369)
T ss_dssp EECCTTTCCCSSCSEEEEESCGGGSCHHHHHHHHHHHHTTCCT---TCEEEEEEEBCCSSC
T ss_pred eccCCCCCCCCCceEEEhhhhhccCCHHHHHHHHHHHHHHcCC---CCEEEEEEeccCCCC
Confidence 9999998888 79999999999999999999999999999999 999999999998764
No 7
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=100.00 E-value=2.5e-45 Score=338.09 Aligned_cols=294 Identities=48% Similarity=0.871 Sum_probs=253.9
Q ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 8 HDTELLEAQAHVWNHIFNFINSMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 8 ~~~~~~~~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
+..+++++...|++++.+++.+++|++|+++|||+.|++.++|+|++|||+++|++|.+++.++||||+|++.|+|++..
T Consensus 3 ~~~~~~~~~~~l~~~~~~~~~~~~l~~a~~lgif~~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~gll~~~~ 82 (358)
T 1zg3_A 3 EESELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNILHRFLRLLTHNGFFAKTI 82 (358)
T ss_dssp TTSCCTTHHHHHHHHHTTHHHHHHHHHHHHHTHHHHHHHHTSCEEHHHHHHHTTCCTTTHHHHHHHHHHHHHTTSEEEEE
T ss_pred chHHhhhHHHHHHHHHHHHHHHHHHHHHHHCChHhHHhhcCCCcCHHHHHHhcCCCCcchHHHHHHHHHHhhCCcEEEec
Confidence 44678899999999999999999999999999999998744599999999999997656889999999999999999871
Q ss_pred ccCCCCCCCC-CCceecChhchhhhcCCCCChHHHHHHhcCccchhhhhhHHHHhhcCC-CChhhhhcCCCccccccCCc
Q 021867 88 LNSSRNNNDE-EQGYVLKNASKLLLKDNPLSVTPFLQAMLDPILLSPWLKLSTWFQNDD-PTPFDTLHGKSFWVYAGDEP 165 (306)
Q Consensus 88 ~~~~~~~~~~-~~~y~~t~~s~~l~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~g~~~~e~~~~~~ 165 (306)
.+.. .++++ ++.|++|+.++.|++++|.++++++.+..++.+++.|.+|+++++++. .++|+..+|.++|+|+.++|
T Consensus 83 ~~~~-~~~g~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~~~g~~~~~~~~~~p 161 (358)
T 1zg3_A 83 VKGK-EGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSSLDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDS 161 (358)
T ss_dssp ECCS-SSSCCCEEEEEECHHHHTTCTTSTTCCHHHHHHHTSHHHHGGGGGHHHHHHCSCCCCHHHHHHSSCHHHHHTSGG
T ss_pred cccc-ccCCCCCCEEeCCHHHHHHhCCCCccHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChHHHHhCCCHHHHHhcCh
Confidence 0000 00000 378999999999988888889999988766667899999999999984 27899999999999999999
Q ss_pred hHHH--HHHHHHHhchhhhHHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchhcCCCeE
Q 021867 166 KINN--FFNEAMASDARLATRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLK 243 (306)
Q Consensus 166 ~~~~--~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~~~~rv~ 243 (306)
+..+ .|..+|...+.... .+++.+++.+.+..+|||||||+|.++..+++++|+++++++|+|.+++.+++ .++|+
T Consensus 162 ~~~~~~~f~~~m~~~~~~~~-~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~-~~~v~ 239 (358)
T 1zg3_A 162 ESSTLSMFQDAMASDSRMFK-LVLQENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTG-NENLN 239 (358)
T ss_dssp GHHHHHHHHHHHHHHHHTHH-HHHHHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCC-CSSEE
T ss_pred hhhhHHHHHHHHhcccHHHH-HHHHhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhccc-CCCcE
Confidence 9999 99999998876665 77888832367889999999999999999999999999999999999998884 46699
Q ss_pred EEeccCCCCCCCccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCCCC
Q 021867 244 YVGGDMFEAIPPADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENKK 304 (306)
Q Consensus 244 ~~~~d~~~~~p~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~~~ 304 (306)
++.+|+++++|.||+|+++++||+|+|+++.++|++++++|+|.++||+|+|+|.+.++.+
T Consensus 240 ~~~~d~~~~~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~ 300 (358)
T 1zg3_A 240 FVGGDMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETS 300 (358)
T ss_dssp EEECCTTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTC
T ss_pred EEeCccCCCCCCceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCC
Confidence 9999999988889999999999999999999999999999996101699999999988764
No 8
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=100.00 E-value=2.4e-45 Score=334.85 Aligned_cols=267 Identities=25% Similarity=0.393 Sum_probs=240.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCC
Q 021867 16 QAHVWNHIFNFINSMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNN 95 (306)
Q Consensus 16 ~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~ 95 (306)
+..+++++.|++.+++|++|+++|||+.|.+ +|+|++|||+++|+ +++.++||||+|++.|++++.+
T Consensus 6 ~~~l~~~~~g~~~~~~l~~a~~lglf~~l~~--g~~t~~elA~~~~~---~~~~l~rlLr~l~~~gl~~~~~-------- 72 (332)
T 3i53_A 6 AHIGLRALADLATPMAVRVAATLRVADHIAA--GHRTAAEIASAAGA---HADSLDRLLRHLVAVGLFTRDG-------- 72 (332)
T ss_dssp CSSCHHHHTCCHHHHHHHHHHHHTHHHHHHT--TCCBHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEECT--------
T ss_pred HHHHHHHHHhhHHHHHHHHHHHcChHHHHhc--CCCCHHHHHHHHCc---CHHHHHHHHHHHHhCCcEEecC--------
Confidence 4568899999999999999999999999985 79999999999999 7899999999999999999975
Q ss_pred CCCCceecChhchhhhcCCCCChHHHHHHhcCccch-hhhhhHHHHhhcCCCChhhhhcCCCccccccCCchHHHHHHHH
Q 021867 96 DEEQGYVLKNASKLLLKDNPLSVTPFLQAMLDPILL-SPWLKLSTWFQNDDPTPFDTLHGKSFWVYAGDEPKINNFFNEA 174 (306)
Q Consensus 96 ~~~~~y~~t~~s~~l~~~~~~~l~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~~~~g~~~~e~~~~~~~~~~~f~~~ 174 (306)
++.|.+|+.++.|.++++.++..++.+..++..+ ..|.+|+++++++. ++|+..+|.++|+++.++|+..+.|..+
T Consensus 73 --~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~ 149 (332)
T 3i53_A 73 --QGVYGLTEFGEQLRDDHAAGKRKWLDMNSAVGRGDLGFVELAHSIRTGQ-PAYPVRYGTSFWEDLGSDPVLSASFDTL 149 (332)
T ss_dssp --TSBEEECTTGGGGSTTCTTCCHHHHCTTSHHHHHGGGGGGHHHHHHHSS-CSHHHHHSSCHHHHHHHCHHHHHHHHHH
T ss_pred --CCeEEcCHhHHHHhcCCchhHHHHHHHcCCHhHHHHHHHHhHHHHhcCC-CHHHHhhCCCHHHHHHhCHHHHHHHHHH
Confidence 5899999999988887777888888765433345 78999999999987 6788889999999999999999999999
Q ss_pred HHhchhhhHHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchh------cCCCeEEEecc
Q 021867 175 MASDARLATRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLES------DLANLKYVGGD 248 (306)
Q Consensus 175 m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~------~~~rv~~~~~d 248 (306)
|...+....+.+++.++ +++..+|||||||+|.++..+++++|+.+++++|+|.+++.|++ ..+||+|+.+|
T Consensus 150 m~~~~~~~~~~~~~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d 227 (332)
T 3i53_A 150 MSHHLELDYTGIAAKYD--WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGS 227 (332)
T ss_dssp HHHHHHHHHTTGGGSSC--CGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECC
T ss_pred HHHhHHhhHHHHHHhCC--CCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecCHHHHHHHHHhhhhcCcCcCeEEecCC
Confidence 99887766666777777 67789999999999999999999999999999999999999886 35899999999
Q ss_pred CCCCCC-CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCCC
Q 021867 249 MFEAIP-PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENK 303 (306)
Q Consensus 249 ~~~~~p-~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~~ 303 (306)
+++++| +||+|+++++||+|+|+++.++|++++++|+| ||+|+|+|.+.++.
T Consensus 228 ~~~~~p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~ 280 (332)
T 3i53_A 228 FFDPLPAGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGS---GGVVLVIEAVAGDE 280 (332)
T ss_dssp TTSCCCCSCSEEEEESCGGGSCHHHHHHHHHHHHHHHTT---TCEEEEEECCCC--
T ss_pred CCCCCCCCCcEEEEehhhccCCHHHHHHHHHHHHHhcCC---CCEEEEEeecCCCC
Confidence 998888 79999999999999999999999999999999 99999999988764
No 9
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=100.00 E-value=5.3e-44 Score=330.90 Aligned_cols=287 Identities=30% Similarity=0.550 Sum_probs=237.6
Q ss_pred chhhhHHHHHHH--HHHHHHHHHHHHHHHHHhCcccccccCCCC---CCHHHHHHhcCC---CCCCcchHHHHHHHHHHc
Q 021867 9 DTELLEAQAHVW--NHIFNFINSMSLKCAVELGIPDIINKHGKP---MTLNELVSALTI---NPSKTRCVYRLMRILIHS 80 (306)
Q Consensus 9 ~~~~~~~~~~l~--~~~~~~~~~~~l~~a~~lglfd~L~~~~~~---~t~~eLA~~~g~---~~~~~~~l~rlLr~L~~~ 80 (306)
.++++++...++ +++.+++.+++|++|+++|||+.|+++++| +|++|||+++|+ +|.+++.++||||+|++.
T Consensus 16 ~~~~~~~~~~l~~~~l~~~~~~~~~l~~a~~lgif~~L~~~g~pg~~~t~~eLA~~~~~~~~~~~~~~~l~rlLr~L~~~ 95 (372)
T 1fp1_D 16 TSEQTEDSACLSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASY 95 (372)
T ss_dssp ---CCHHHHHHHHHHHHHTTHHHHHHHHHHHTTHHHHHHTCSSTTCCBCHHHHHTTSCGGGCCTTHHHHHHHHHHHHHHT
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHCChHHHHHhcCCCCCCcCHHHHHHhcCCCCCCCcChHHHHHHHHHHhhC
Confidence 456777888888 999999999999999999999999864226 999999999999 665678999999999999
Q ss_pred CceeeecccCCCCCCCC--CCceecChhchhhhcCCC-CChHHHHHHhcCccchhhhhhHHHHhhcCCCChhhhhcCCCc
Q 021867 81 GFFAQQTLNSSRNNNDE--EQGYVLKNASKLLLKDNP-LSVTPFLQAMLDPILLSPWLKLSTWFQNDDPTPFDTLHGKSF 157 (306)
Q Consensus 81 g~l~~~~~~~~~~~~~~--~~~y~~t~~s~~l~~~~~-~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~ 157 (306)
|+|++..... .+| ++.|++|+.++.|+++++ .++++++.+..++.+++.|.+|+++++++..++|+..+|.++
T Consensus 96 gll~~~~~~~----~~g~~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~~g~~~ 171 (372)
T 1fp1_D 96 SVLTSTTRTI----EDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTK 171 (372)
T ss_dssp TSEEEEEEEC----TTSCEEEEEEECTTGGGGSTTCTTCCCTHHHHHHTCHHHHHHHTTHHHHHHSCC------------
T ss_pred CceEeccccc----CCCCcCCeEecCHHHHHHhCCCCCCCHHHHHHHhcCchHHHHHHHHHHHHHcCCCChhHHHhCCCH
Confidence 9999871000 011 268999999999888877 688889888766667889999999999983378998899999
Q ss_pred cccccCCchHHHHHHHHHHhchhhhHHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchh
Q 021867 158 WVYAGDEPKINNFFNEAMASDARLATRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLES 237 (306)
Q Consensus 158 ~e~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~ 237 (306)
|+|+.++|+..+.|.++|...+......+++.++ .+++..+|||||||+|.++..+++++|+++++++|+|.+++.+++
T Consensus 172 ~~~~~~~~~~~~~f~~~m~~~~~~~~~~l~~~~~-~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~ 250 (372)
T 1fp1_D 172 YEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYT-GFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPP 250 (372)
T ss_dssp --CCSSCHHHHHHHHHHHHHHHHHHHHHHHHHCC-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCC
T ss_pred HHHHHhCHHHHHHHHHHHHhhhHHHHHHHHHHhh-ccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHHHHhhhh
Confidence 9999999999999999999888777778888775 256788999999999999999999999999999999999999884
Q ss_pred cCCCeEEEeccCCCCCCCccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCCCC
Q 021867 238 DLANLKYVGGDMFEAIPPADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENKK 304 (306)
Q Consensus 238 ~~~rv~~~~~d~~~~~p~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~~~ 304 (306)
.++|+++.+|+++++|.+|+|+++++||+|+|+++.++|++++++|+| ||+|+|+|.+.++..
T Consensus 251 -~~~v~~~~~d~~~~~~~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~ 313 (372)
T 1fp1_D 251 -LSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSP---NGKVIIVEFILPEEP 313 (372)
T ss_dssp -CTTEEEEECCTTTCCCCEEEEEEESSGGGSCHHHHHHHHHHHHHHEEE---EEEEEEEEEEECSSC
T ss_pred -cCCCEEEeCCcccCCCCCCEEEEecccccCCHHHHHHHHHHHHHhcCC---CCEEEEEEeccCCCC
Confidence 468999999999988889999999999999999999999999999999 999999999988764
No 10
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=100.00 E-value=8.2e-44 Score=324.80 Aligned_cols=266 Identities=26% Similarity=0.392 Sum_probs=242.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCC
Q 021867 14 EAQAHVWNHIFNFINSMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRN 93 (306)
Q Consensus 14 ~~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~ 93 (306)
+++..+++++.+++.+++|++++++|||+.|.+ +|.|++|||+++|+ +++.++|+||+|++.|+|++.+
T Consensus 7 ~~~~~l~~~~~~~~~~~~l~~~~~lgi~~~l~~--~~~t~~ela~~~~~---~~~~l~r~Lr~L~~~g~l~~~~------ 75 (334)
T 2ip2_A 7 AAARNLIQVVTGEWKSRCVYVATRLGLADLIES--GIDSDETLAAAVGS---DAERIHRLMRLLVAFEIFQGDT------ 75 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHT--TCCSHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEET------
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHcCcHHHHhC--CCCCHHHHHHHhCc---CHHHHHHHHHHHHhCCceEecC------
Confidence 677899999999999999999999999999975 79999999999999 7899999999999999999985
Q ss_pred CCCCCCceecChhchhhhcCCCCChHHHHHHhcCccchhhhhhHHHHhhcCCCChhhhhcCCCccccccCCchHHHHHHH
Q 021867 94 NNDEEQGYVLKNASKLLLKDNPLSVTPFLQAMLDPILLSPWLKLSTWFQNDDPTPFDTLHGKSFWVYAGDEPKINNFFNE 173 (306)
Q Consensus 94 ~~~~~~~y~~t~~s~~l~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~e~~~~~~~~~~~f~~ 173 (306)
++.|++|+.++.|. ++|.++.+++.+..++.. +.|.+|+++++++. ++|+..+|.++|+++.++|+..+.|.+
T Consensus 76 ----~~~y~~t~~s~~l~-~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~ 148 (334)
T 2ip2_A 76 ----RDGYANTPTSHLLR-DVEGSFRDMVLFYGEEFH-AAWTPACEALLSGT-PGFELAFGEDFYSYLKRCPDAGRRFLL 148 (334)
T ss_dssp ----TTEEEECHHHHTTS-SSTTCSHHHHHHHTTHHH-HHTTTHHHHHHHCC-CHHHHHHSSCHHHHHHHCHHHHHHHHH
T ss_pred ----CCeEecCHHHHHHh-CCCccHHHHHHHhcCchh-hHHHHHHHHHhcCC-ChhhhhcCCCHHHHHhhChHHHHHHHH
Confidence 58999999999888 777789999887765544 88999999999987 789888999999999999999999999
Q ss_pred HHHhchhhhHHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchh------cCCCeEEEec
Q 021867 174 AMASDARLATRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLES------DLANLKYVGG 247 (306)
Q Consensus 174 ~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~------~~~rv~~~~~ 247 (306)
+| ..+....+.+++.++ +++ .+|||||||+|.++..+++++|+.+++++|+|.+++.+++ ..+||+++.+
T Consensus 149 ~m-~~~~~~~~~~~~~~~--~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~ 224 (334)
T 2ip2_A 149 AM-KASNLAFHEIPRLLD--FRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGG 224 (334)
T ss_dssp HH-GGGHHHHHHHHHHSC--CTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHTTSEEEEES
T ss_pred HH-HHHHHHHHHHHHhCC--CCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecC
Confidence 99 887777788888887 666 9999999999999999999999999999999988888876 3579999999
Q ss_pred cCCCCCC-CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCCCC
Q 021867 248 DMFEAIP-PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENKK 304 (306)
Q Consensus 248 d~~~~~p-~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~~~ 304 (306)
|+++++| +||+|++++++|+|+++++.++|++++++|+| ||+++|.|.+.++.+
T Consensus 225 d~~~~~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~ 279 (334)
T 2ip2_A 225 DMLQEVPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAG---DGRVVVIERTISASE 279 (334)
T ss_dssp CTTTCCCSSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCT---TCEEEEEECCBCSSS
T ss_pred CCCCCCCCCCCEEEEchhccCCCHHHHHHHHHHHHHhcCC---CCEEEEEEeccCCCC
Confidence 9999777 59999999999999999999999999999999 999999999987653
No 11
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=100.00 E-value=4.6e-43 Score=323.65 Aligned_cols=272 Identities=18% Similarity=0.244 Sum_probs=232.1
Q ss_pred CCchhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeee
Q 021867 7 EHDTELLEAQAHVWNHIFNFINSMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQ 86 (306)
Q Consensus 7 ~~~~~~~~~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~ 86 (306)
+.+.+++++...+++++.|++.+++|++++++|||+.|+++++|+|++|||+++|+ +++.++||||+|++.|+|++.
T Consensus 7 ~~~~~~~~a~~~l~~l~~g~~~~~~l~~a~~lgifd~L~~~~~~~t~~eLA~~~g~---~~~~l~rlLr~l~~~g~l~~~ 83 (363)
T 3dp7_A 7 KEQCTAAEAQRLAQEIAFGPVVFQVSRLMLKFGIFQLLSGKREGYTLQEISGRTGL---TRYAAQVLLEASLTIGTILLE 83 (363)
T ss_dssp CSCCCSTTHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHTCTTCBCHHHHHHHHTC---CHHHHHHHHHHHHHHTSEEEE
T ss_pred cCchhHHHHHHHHHHHHhhHHHHHHHHHHHHhCHHHHHHhcCCCCCHHHHHHHhCc---CHHHHHHHHHHHhhCCCeEec
Confidence 44677889999999999999999999999999999999874579999999999999 789999999999999999886
Q ss_pred cccCCCCCCCCCCceecChhchhhhcCCCCChHHHHHHhcCccchhhhhhHHHHhhcCCCChhhhhcC--CCccccccCC
Q 021867 87 TLNSSRNNNDEEQGYVLKNASKLLLKDNPLSVTPFLQAMLDPILLSPWLKLSTWFQNDDPTPFDTLHG--KSFWVYAGDE 164 (306)
Q Consensus 87 ~~~~~~~~~~~~~~y~~t~~s~~l~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g--~~~~e~~~~~ 164 (306)
+++|++|+.+++|+++++.+ .++.+. .+..++.|.+|+++++++. .++...+| .++|+++.++
T Consensus 84 -----------~~~y~~t~~s~~L~~~~~~~--~~~~~~-~~~~~~~~~~L~~~lr~g~-~~~~~~~g~~~~~~~~~~~~ 148 (363)
T 3dp7_A 84 -----------EDRYVLAKAGWFLLNDKMAR--VNMEFN-HDVNYQGLFHLEEALLNGR-PEGLKVFGEWPTIYEGLSQL 148 (363)
T ss_dssp -----------TTEEEECHHHHHHHHCHHHH--HHHHHH-HHTTHHHHTTHHHHHHHSS-CGGGGGTCCCSSHHHHGGGS
T ss_pred -----------CCEEecccchHHhhCCCccc--chheee-cHHhhhhHHHHHHHHhcCC-CccccccCchHhHHHHHhhC
Confidence 48999999999888765322 233332 3457899999999999987 56777787 6899999999
Q ss_pred chHHHH----HHHHHHhchhhhHHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchh---
Q 021867 165 PKINNF----FNEAMASDARLATRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLES--- 237 (306)
Q Consensus 165 ~~~~~~----f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~--- 237 (306)
|+..+. |..+|.... ...+++.+. ..+..+|||||||+|.++..+++++|+++++++|+|.+++.|++
T Consensus 149 ~~~~~~~~~~f~~~~~~~~---~~~~l~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~ 223 (363)
T 3dp7_A 149 PEQVQKSWFGFDHFYSDQS---FGKALEIVF--SHHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTA 223 (363)
T ss_dssp CHHHHHHHHHHHHHTTCCC---CHHHHHHHG--GGCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhhhh---HHHHHHHhc--ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHHHHH
Confidence 987763 666665433 223444433 35778999999999999999999999999999999999999887
Q ss_pred ---cCCCeEEEeccCCCC---CC-CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCCCC
Q 021867 238 ---DLANLKYVGGDMFEA---IP-PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENKK 304 (306)
Q Consensus 238 ---~~~rv~~~~~d~~~~---~p-~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~~~ 304 (306)
..+||+++.+|++++ +| +||+|+++++||+|+++++.++|++++++|+| ||+|+|+|.+.++.+
T Consensus 224 ~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~ 294 (363)
T 3dp7_A 224 GLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGK---DSKVYIMETLWDRQR 294 (363)
T ss_dssp TCTTGGGEEEEECCCCSSSCCCCCCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCT---TCEEEEEECCTTSCS
T ss_pred hcCcccceEEEEccccccCCCCCCCcCEEEEechhhhCCHHHHHHHHHHHHHhcCC---CcEEEEEeeccCCcc
Confidence 236899999999984 66 69999999999999999999999999999999 999999999988754
No 12
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=100.00 E-value=2.5e-41 Score=312.88 Aligned_cols=271 Identities=22% Similarity=0.361 Sum_probs=238.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCC
Q 021867 12 LLEAQAHVWNHIFNFINSMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSS 91 (306)
Q Consensus 12 ~~~~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~ 91 (306)
..+....+++++.+++.+++|++++++|||+.|.. +|+|++|||+++|+ +++.++|+||+|++.|+|++..
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~l~~~~~l~i~~~l~~--~~~t~~eLA~~~g~---~~~~l~r~Lr~L~~~Gll~~~~---- 83 (374)
T 1qzz_A 13 TDQDLDVLLKNLGNLVTPMALRVAATLRLVDHLLA--GADTLAGLADRTDT---HPQALSRLVRHLTVVGVLEGGE---- 83 (374)
T ss_dssp CHHHHHHHHHTTTCCHHHHHHHHHHHTTHHHHHHT--TCCSHHHHHHHHTC---CHHHHHHHHHHHHHTTSEECCC----
T ss_pred CchHHHHHHHHHHhhHHHHHHHHHHHcChHHHHhC--CCCCHHHHHHHhCc---CHHHHHHHHHHHhhCCCEEEeC----
Confidence 34567789999999999999999999999999964 79999999999999 7899999999999999999865
Q ss_pred CCCCCCCC--ceecChhchhhhcCCCCChHHHHHHhcCccch-hhhhhHHHHhhcCCCChhhhhcCCCccccccCCchHH
Q 021867 92 RNNNDEEQ--GYVLKNASKLLLKDNPLSVTPFLQAMLDPILL-SPWLKLSTWFQNDDPTPFDTLHGKSFWVYAGDEPKIN 168 (306)
Q Consensus 92 ~~~~~~~~--~y~~t~~s~~l~~~~~~~l~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~~~~g~~~~e~~~~~~~~~ 168 (306)
++ .|.+|+.++.|.++++.++..++.+..++..+ ..|..|.++++++. ++|+..+|.++|+++..+|+..
T Consensus 84 ------~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~ 156 (374)
T 1qzz_A 84 ------KQGRPLRPTRLGMLLADGHPAQQRAWLDLNGAVSHADLAFTGLLDVVRTGR-PAYAGRYGRPFWEDLSADVALA 156 (374)
T ss_dssp ------C-CCCCEECTTGGGGSTTCTTCHHHHHCTTSHHHHHHGGGGGHHHHHHHSC-CSHHHHHSSCHHHHHHHCHHHH
T ss_pred ------CCCeEEEEChHHHhhcCCCcccHHHHHHHcCChhhHHHHHHHHHHHHhcCC-ChhhhhhCCCHHHHHhhChHHH
Confidence 46 89999999999988888899888776444455 88999999999987 6788888999999999999999
Q ss_pred HHHHHHHHhchhhhHHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchh------cCCCe
Q 021867 169 NFFNEAMASDARLATRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLES------DLANL 242 (306)
Q Consensus 169 ~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~------~~~rv 242 (306)
..|..+|........+.+++.++ +.+..+|||||||+|.++..+++.+|+++++++|++.+++.|++ ..++|
T Consensus 157 ~~f~~~~~~~~~~~~~~~~~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v 234 (374)
T 1qzz_A 157 DSFDALMSCDEDLAYEAPADAYD--WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRV 234 (374)
T ss_dssp HHHHHTCGGGSTTTTHHHHHTSC--CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTE
T ss_pred HHHHHHHHHhhHhHHHHHHHhCC--CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHHhcCCCCce
Confidence 99999999887766778888887 67789999999999999999999999999999999999998886 34589
Q ss_pred EEEeccCCCCCC-CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEee--ecCCC
Q 021867 243 KYVGGDMFEAIP-PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDM--IRENK 303 (306)
Q Consensus 243 ~~~~~d~~~~~p-~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~--~~~~~ 303 (306)
+++.+|+++++| +||+|++++++|+|+++++.++|++++++|+| ||+++|+|. ++++.
T Consensus 235 ~~~~~d~~~~~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~ 295 (374)
T 1qzz_A 235 TVAEGDFFKPLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEP---GGRLLVLDRADVEGDG 295 (374)
T ss_dssp EEEECCTTSCCSCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEE---EEEEEEEECCH-----
T ss_pred EEEeCCCCCcCCCCCCEEEEeccccCCCHHHHHHHHHHHHHhcCC---CcEEEEEechhhcCCC
Confidence 999999998777 49999999999999999989999999999999 999999999 77654
No 13
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=100.00 E-value=3.6e-40 Score=303.76 Aligned_cols=262 Identities=23% Similarity=0.375 Sum_probs=234.0
Q ss_pred chhhhHHHHHHHHHHH-HHHHHHHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 9 DTELLEAQAHVWNHIF-NFINSMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 9 ~~~~~~~~~~l~~~~~-~~~~~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
+.++.++..++++++. |++.+++|++++++|||+.|.+ +|.|++|||+++|+ +++.++||||+|++.|+|++.+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~lgif~~L~~--~~~t~~eLA~~~g~---~~~~l~rlLr~L~~~gll~~~~ 98 (359)
T 1x19_A 24 NNDLLNYYHRANELVFKGLIEFSCMKAAIELDLFSHMAE--GPKDLATLAADTGS---VPPRLEMLLETLRQMRVINLED 98 (359)
T ss_dssp CCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTHHHHHTT--CCBCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEET
T ss_pred ccccCCcchHHHHHHHHHHHHHHHHHHHHHcCcHHHHcC--CCCCHHHHHHHhCc---ChHHHHHHHHHHHhCCCeEeeC
Confidence 5677888899999996 8999999999999999999986 79999999999999 7899999999999999999974
Q ss_pred ccCCCCCCCCCCceecChh-chhhhcCCC---CChHHHHHHhcCccchhhhhhHHHHhhcCCCChhhhhcCCCccccccC
Q 021867 88 LNSSRNNNDEEQGYVLKNA-SKLLLKDNP---LSVTPFLQAMLDPILLSPWLKLSTWFQNDDPTPFDTLHGKSFWVYAGD 163 (306)
Q Consensus 88 ~~~~~~~~~~~~~y~~t~~-s~~l~~~~~---~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~e~~~~ 163 (306)
+.|++|+. +.+|.++++ .++++++.+. .+..++.|.+|+++++++.+ |+++.+
T Consensus 99 -----------~~y~~t~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~~~l~~g~~-----------~~~~~~ 155 (359)
T 1x19_A 99 -----------GKWSLTEFADYMFSPTPKEPNLHQTPVAKAM-AFLADDFYMGLSQAVRGQKN-----------FKGQVP 155 (359)
T ss_dssp -----------TEEEECHHHHHHSSSSCSBTTBCCHHHHHHH-HHHHHHTGGGHHHHHTTSCC-----------CCCSSC
T ss_pred -----------CeEecCHHHHHHhcCCCCCccccHHHHHHHH-HHHHHHHHHHHHHHHhcCCC-----------Cccccc
Confidence 69999996 457877777 7888888765 34578899999999998753 777888
Q ss_pred Cch---HHHHHHHHHHhchh-hhHHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchh--
Q 021867 164 EPK---INNFFNEAMASDAR-LATRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLES-- 237 (306)
Q Consensus 164 ~~~---~~~~f~~~m~~~~~-~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~-- 237 (306)
+|+ ..+.|...|...+. ...+.+++.++ +.+..+|||||||+|.++..+++++|+.+++++|+|.+++.+++
T Consensus 156 ~p~~~~~~~~f~~~m~~~~~~~~~~~l~~~~~--~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~ 233 (359)
T 1x19_A 156 YPPVTREDNLYFEEIHRSNAKFAIQLLLEEAK--LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLVNENA 233 (359)
T ss_dssp SSCCSHHHHHHHHHHHHTTCHHHHHHHHHHCC--CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHhccchhHHHHHHhcC--CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEecHHHHHHHHHHH
Confidence 899 99999999999887 77788888887 67889999999999999999999999999999999999998886
Q ss_pred ----cCCCeEEEeccCCC-CCCCccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCCC
Q 021867 238 ----DLANLKYVGGDMFE-AIPPADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENK 303 (306)
Q Consensus 238 ----~~~rv~~~~~d~~~-~~p~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~~ 303 (306)
..+||+++.+|+++ +.+++|+|++++++|+|+++++.++|++++++|+| ||+++|+|.+.++.
T Consensus 234 ~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~ 301 (359)
T 1x19_A 234 AEKGVADRMRGIAVDIYKESYPEADAVLFCRILYSANEQLSTIMCKKAFDAMRS---GGRLLILDMVIDDP 301 (359)
T ss_dssp HHTTCTTTEEEEECCTTTSCCCCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCT---TCEEEEEEECCCCT
T ss_pred HhcCCCCCEEEEeCccccCCCCCCCEEEEechhccCCHHHHHHHHHHHHHhcCC---CCEEEEEecccCCC
Confidence 35679999999998 66778999999999999999999999999999999 99999999988764
No 14
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=100.00 E-value=1.1e-40 Score=307.11 Aligned_cols=267 Identities=23% Similarity=0.421 Sum_probs=240.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCC
Q 021867 16 QAHVWNHIFNFINSMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNN 95 (306)
Q Consensus 16 ~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~ 95 (306)
..++++++.+++.+++|.+++++|||+.|.. +|.|++|||+++|+ ++..++|+||+|++.|+|++..
T Consensus 20 ~~~~~~~~~~~~~~~~l~~~~~l~i~~~l~~--~~~t~~ela~~~~~---~~~~l~r~L~~L~~~g~~~~~~-------- 86 (360)
T 1tw3_A 20 ALRTLIRLGSLHTPMVVRTAATLRLVDHILA--GARTVKALAARTDT---RPEALLRLIRHLVAIGLLEEDA-------- 86 (360)
T ss_dssp HHHHHHHHHCSHHHHHHHHHHHTTHHHHHHT--TCCBHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEE--------
T ss_pred hHHHHHHHHhHHHHHHHHHHHHhCHHHHHhC--CCCCHHHHHHHhCc---CHHHHHHHHHHHHHCCCEEecC--------
Confidence 5778999999999999999999999999964 79999999999999 7899999999999999999965
Q ss_pred CCCCceecChhchhhhcCCCCChHHHHHHhcCcc-chhhhhhHHHHhhcCCCChhhhhcCCCccccccCCchHHHHHHHH
Q 021867 96 DEEQGYVLKNASKLLLKDNPLSVTPFLQAMLDPI-LLSPWLKLSTWFQNDDPTPFDTLHGKSFWVYAGDEPKINNFFNEA 174 (306)
Q Consensus 96 ~~~~~y~~t~~s~~l~~~~~~~l~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~~~~~~~g~~~~e~~~~~~~~~~~f~~~ 174 (306)
++.|++|+.++.|.+++|.++..++.+...+. .+..|..|.+.++++. ++|+..+|.++|+++..+|+....|...
T Consensus 87 --~g~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~p~~~~~f~~~ 163 (360)
T 1tw3_A 87 --PGEFVPTEVGELLADDHPAAQRAWHDLTQAVARADISFTRLPDAIRTGR-PTYESIYGKPFYEDLAGRPDLRASFDSL 163 (360)
T ss_dssp --TTEEEECTTGGGGSTTSTTCHHHHTCTTSHHHHHGGGGGGHHHHHHHCC-CCHHHHHSSCHHHHHHTCHHHHHHHHHH
T ss_pred --CCeEEeCHHHHHHhcCCchhHHHHHHHhcCchhHHHHHHHHHHHHHcCC-CHHHHhcCCCHHHHHHhChHHHHHHHHH
Confidence 58999999999999888888988876654333 5688999999999987 5788888999999998999999999999
Q ss_pred HHhchhhhHHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchh------cCCCeEEEecc
Q 021867 175 MASDARLATRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLES------DLANLKYVGGD 248 (306)
Q Consensus 175 m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~------~~~rv~~~~~d 248 (306)
|........+.+++.++ +.+..+|||||||+|.++..+++++|+++++++|++.+++.+++ ..++|+++.+|
T Consensus 164 ~~~~~~~~~~~l~~~~~--~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d 241 (360)
T 1tw3_A 164 LACDQDVAFDAPAAAYD--WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGD 241 (360)
T ss_dssp HTTTTTTTTHHHHHHSC--CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECC
T ss_pred HHHHHHHhHHHHHHhCC--CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCC
Confidence 99887777778888887 67788999999999999999999999999999999999998876 34589999999
Q ss_pred CCCCCC-CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee-cCCC
Q 021867 249 MFEAIP-PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI-RENK 303 (306)
Q Consensus 249 ~~~~~p-~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~-~~~~ 303 (306)
+++++| +||+|++++++|+|+++++.++|++++++|+| ||+++|+|.+ +++.
T Consensus 242 ~~~~~~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~ 295 (360)
T 1tw3_A 242 FFEPLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEP---GGRILIHERDDLHEN 295 (360)
T ss_dssp TTSCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEE---EEEEEEEECCBCGGG
T ss_pred CCCCCCCCccEEEEcccccCCCHHHHHHHHHHHHHhcCC---CcEEEEEEEeccCCC
Confidence 998777 49999999999999999999999999999999 9999999998 6654
No 15
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=100.00 E-value=4.9e-40 Score=301.84 Aligned_cols=266 Identities=17% Similarity=0.274 Sum_probs=227.7
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecc
Q 021867 9 DTELLEAQAHVWNHIFNFINSMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTL 88 (306)
Q Consensus 9 ~~~~~~~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~ 88 (306)
+...+..+..+++++.+++.+++|++|+++|||++|. +|+|++|||+++|+ +++.++||||+|++.|+|++.+
T Consensus 18 ~~~~l~~p~~l~~~~~~~~~~~~l~~a~~lgif~~l~---~~~t~~elA~~~~~---~~~~l~rlLr~L~~~gll~~~~- 90 (352)
T 3mcz_A 18 DKAALTSVVDLVKLSDQYRQSAILHYAVADKLFDLTQ---TGRTPAEVAASFGM---VEGKAAILLHALAALGLLTKEG- 90 (352)
T ss_dssp SCCCCCSHHHHHHHHHTHHHHHHHHHHHHTTHHHHTT---SCBCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEET-
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCChHHHhC---CCCCHHHHHHHhCc---ChHHHHHHHHHHHHCCCeEecC-
Confidence 3344444555999999999999999999999999996 39999999999999 7899999999999999999974
Q ss_pred cCCCCCCCCCCceecChhch-hhhcCCCCChHHHHHHhcCccchhhhhhHHHHhhcCCCChhhhhcCCCccccccCCchH
Q 021867 89 NSSRNNNDEEQGYVLKNASK-LLLKDNPLSVTPFLQAMLDPILLSPWLKLSTWFQNDDPTPFDTLHGKSFWVYAGDEPKI 167 (306)
Q Consensus 89 ~~~~~~~~~~~~y~~t~~s~-~l~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~e~~~~~~~~ 167 (306)
++|.+|+.++ ++.+++|.+++.++.+. ...++.|.+|+++++++.+.+|+.. .++..+|+.
T Consensus 91 ----------~~y~~t~~s~~~l~~~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~g~~~~f~~~------~~~~~~~~~ 152 (352)
T 3mcz_A 91 ----------DAFRNTALTERYLTTTSADYIGPIVEHQ--YLQWDNWPRLGEILRSEKPLAFQQE------SRFAHDTRA 152 (352)
T ss_dssp ----------TEEEECHHHHHHHSTTCTTCCHHHHHHH--HTTTTTGGGHHHHHTCSSCCTTSHH------HHTTTCHHH
T ss_pred ----------CeeecCHHHHhhccCCChhhHHHHHHHh--HHHHHHHHHHHHHHhCCCCCCcccc------cccccCHHH
Confidence 7899999998 66677788888887654 2467899999999999886655432 123578999
Q ss_pred HHHHHHHHHhchhhhHHHHHhhchhhhcC-CCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchh------cCC
Q 021867 168 NNFFNEAMASDARLATRVVIHKCKDVFEG-LNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLES------DLA 240 (306)
Q Consensus 168 ~~~f~~~m~~~~~~~~~~~~~~~~~~~~~-~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~------~~~ 240 (306)
...|..+|...... ...+++.++ +.+ ..+|||||||+|.++..+++++|+.+++++|+|.+++.+++ ..+
T Consensus 153 ~~~f~~~m~~~~~~-~~~~l~~~~--~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~ 229 (352)
T 3mcz_A 153 RDAFNDAMVRLSQP-MVDVVSELG--VFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGG 229 (352)
T ss_dssp HHHHHHHHHHHHHH-HHHHHHTCG--GGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCGG
T ss_pred HHHHHHHHHhhhhh-HHHHHHhCC--CcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCCC
Confidence 99999999874332 246788888 566 89999999999999999999999999999999999988876 346
Q ss_pred CeEEEeccCCCC---CC-CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCCCCC
Q 021867 241 NLKYVGGDMFEA---IP-PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENKKR 305 (306)
Q Consensus 241 rv~~~~~d~~~~---~p-~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~~~~ 305 (306)
||+++.+|++++ .+ +||+|+++++||+|+++++.++|++++++|+| ||+|+|+|.++++.+.
T Consensus 230 ~v~~~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~ 295 (352)
T 3mcz_A 230 RVEFFEKNLLDARNFEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKP---GGALLILTMTMNDDRV 295 (352)
T ss_dssp GEEEEECCTTCGGGGTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEE---EEEEEEEEECCCTTSS
T ss_pred ceEEEeCCcccCcccCCCCccEEEEecccccCCHHHHHHHHHHHHHHcCC---CCEEEEEEeccCCCCC
Confidence 899999999984 55 49999999999999999999999999999999 9999999999988653
No 16
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=100.00 E-value=8.6e-40 Score=297.98 Aligned_cols=263 Identities=23% Similarity=0.312 Sum_probs=232.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCC
Q 021867 16 QAHVWNHIFNFINSMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNN 95 (306)
Q Consensus 16 ~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~ 95 (306)
+..+++++.+++.+++|++++++|||+.|++ +|.|++|||+++|+ +++.++||||+|++.|+|++.
T Consensus 7 ~~~l~~~~~~~~~~~~l~~~~~l~i~~~l~~--~~~t~~ela~~~~~---~~~~l~r~L~~L~~~g~l~~~--------- 72 (335)
T 2r3s_A 7 PALFFNTVNAYQRSAAIKAAVELNVFTAISQ--GIESSQSLAQKCQT---SERGMRMLCDYLVIIGFMTKQ--------- 72 (335)
T ss_dssp SHHHHHHHTTHHHHHHHHHHHHTTHHHHHTT--SEECHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEE---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcChHHHHhc--CCCCHHHHHHHhCC---CchHHHHHHHHHHhcCCeEec---------
Confidence 3678999999999999999999999999986 79999999999999 789999999999999999875
Q ss_pred CCCCceecChhc-hhhhcCCCCChHHHHHHhcCccchhhhhhHHHHhhcCCCChhhhhcCCCccccccCCchHHHHHHHH
Q 021867 96 DEEQGYVLKNAS-KLLLKDNPLSVTPFLQAMLDPILLSPWLKLSTWFQNDDPTPFDTLHGKSFWVYAGDEPKINNFFNEA 174 (306)
Q Consensus 96 ~~~~~y~~t~~s-~~l~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~e~~~~~~~~~~~f~~~ 174 (306)
++.|++|+.+ .+|.++++.++..++.+..++..++.|.+|+++++++. ++|+ + |+++.++++....|...
T Consensus 73 --~~~y~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~-----~-~~~~~~~~~~~~~~~~~ 143 (335)
T 2r3s_A 73 --AEGYRLTSDSAMFLDRQSKFYVGDAIEFLLSPMITNGFNDLTAAVLKGG-TAIS-----S-EGTLSPEHPVWVQFAKA 143 (335)
T ss_dssp --TTEEEECHHHHHHTCTTSTTCCGGGHHHHTCHHHHGGGTTHHHHHHHTS-CCST-----T-TGGGSTTCTHHHHHHHH
T ss_pred --CCEEecCHHHHHHhccCCcHHHHHHHHHhcchhhHHHHHhHHHHHhcCC-CCCC-----C-cccccCCHHHHHHHHHH
Confidence 5899999999 68888777788888887755467889999999999987 4443 3 88888899999999999
Q ss_pred HHhchhhhHHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchh------cCCCeEEEecc
Q 021867 175 MASDARLATRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLES------DLANLKYVGGD 248 (306)
Q Consensus 175 m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~------~~~rv~~~~~d 248 (306)
|..........+++.+++.+.+..+|||||||+|.++..+++++|+.+++++|++.+++.|++ ..+||+++.+|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d 223 (335)
T 2r3s_A 144 MSPMMANPAQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGS 223 (335)
T ss_dssp SGGGGHHHHHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESC
T ss_pred HHHHHhhhHHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCcceEEEecc
Confidence 998887777778887772127788999999999999999999999999999999988888876 25689999999
Q ss_pred CCC-CCC-CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCCCC
Q 021867 249 MFE-AIP-PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENKK 304 (306)
Q Consensus 249 ~~~-~~p-~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~~~ 304 (306)
+++ +.| +||+|++++++|+|+++++.++|++++++|+| ||+++|+|...++..
T Consensus 224 ~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~ 278 (335)
T 2r3s_A 224 AFEVDYGNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAV---EGKVIVFDFIPNSDR 278 (335)
T ss_dssp TTTSCCCSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEE---EEEEEEEECCCCTTS
T ss_pred cccCCCCCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCC---CcEEEEEeecCCCCc
Confidence 998 666 49999999999999999999999999999999 999999999987653
No 17
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.73 E-value=6.2e-17 Score=142.15 Aligned_cols=107 Identities=17% Similarity=0.297 Sum_probs=96.0
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHC--CCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCC-CCCCccEEEehh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAF--PNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFE-AIPPADAVLLKW 263 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~--p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~-~~p~~D~~~~~~ 263 (306)
.++..+|||||||+|.++..+++++ |+++++++|+ +.+++.|++ ...+|+++++|+.+ +.+++|++++..
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~ 147 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNF 147 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEES
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeee
Confidence 4567899999999999999999985 5789999999 899999886 35689999999998 777899999999
Q ss_pred hhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCCC
Q 021867 264 ILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENK 303 (306)
Q Consensus 264 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~~ 303 (306)
+||++++++...+|++++++|+| ||++++.|.+.+++
T Consensus 148 ~l~~~~~~~~~~~l~~i~~~Lkp---GG~lii~e~~~~~~ 184 (261)
T 4gek_A 148 TLQFLEPSERQALLDKIYQGLNP---GGALVLSEKFSFED 184 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEE---EEEEEEEEEBCCSS
T ss_pred eeeecCchhHhHHHHHHHHHcCC---CcEEEEEeccCCCC
Confidence 99999988888899999999999 99999999887654
No 18
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.66 E-value=1.5e-15 Score=140.11 Aligned_cols=216 Identities=8% Similarity=0.018 Sum_probs=141.5
Q ss_pred CcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhch-hhhcCCCCC
Q 021867 39 GIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASK-LLLKDNPLS 117 (306)
Q Consensus 39 glfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~-~l~~~~~~~ 117 (306)
++|..| . +|.|+.|||+++|+ +++.+++||+.|.+.|+++.. ++ |++|+.+. ++...++..
T Consensus 47 ~ll~~L-~--~~~t~~eLa~~~g~---~~~~v~~~L~~l~~~gll~~~-----------~~-~~lt~~~~~~l~~~~~~~ 108 (373)
T 2qm3_A 47 NVLSAV-L--ASDDIWRIVDLSEE---PLPLVVAILESLNELGYVTFE-----------DG-VKLTEKGEELVAEYGIGK 108 (373)
T ss_dssp HHHHHH-H--HCSCHHHHHHHHTS---CHHHHHHHHHHHHHTTSEECS-----------SS-SEECHHHHHHHHHHTCCC
T ss_pred HHHHHh-c--CCCCHHHHHHHhCC---ChHHHHHHHHHHhhCCcEEEC-----------CC-EEECHHHHHHHHhcCccc
Confidence 778888 4 68999999999999 789999999999999999874 34 99999776 444322111
Q ss_pred hHHHHHHh-cC-c----cchhhhhhHHHHhhcCCCChhhhhcCCCccccccCCchHHHHHHHHHHhchhhhHHHHHhhch
Q 021867 118 VTPFLQAM-LD-P----ILLSPWLKLSTWFQNDDPTPFDTLHGKSFWVYAGDEPKINNFFNEAMASDARLATRVVIHKCK 191 (306)
Q Consensus 118 l~~~~~~~-~~-~----~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~e~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~ 191 (306)
....+... .. . .+...|..+.+.++... .+. ..|+-....++... .... .... ..
T Consensus 109 ~~~~~~~~~~g~g~~~~~~~~~~~~l~~~~~~~~-~~~------~~~~~~~~~~~~~~--~~~l---------~~~~-~~ 169 (373)
T 2qm3_A 109 RYDFTCPHCQGKTVDLQAFADLLEQFREIVKDRP-EPL------HEFDQAYVTPETTV--ARVI---------LMHT-RG 169 (373)
T ss_dssp CCC------------CGGGHHHHHHHHHHHTTCC-CCC------GGGTCCCBCHHHHH--HHHH---------HHHH-TT
T ss_pred cccccchhhcCCCcchhhhHHHHHHHHHHHhcCC-ccc------hhcCCeecCHHHHH--HHHH---------HHhh-cC
Confidence 11010000 00 0 11123445555555432 111 11111001111110 0000 0011 11
Q ss_pred hhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCCCCC-----CccEEE
Q 021867 192 DVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFEAIP-----PADAVL 260 (306)
Q Consensus 192 ~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~~~p-----~~D~~~ 260 (306)
.....+|||+| |+|.++..+++..|+.+++++|+ +.+++.|++ ..++|+++.+|+.++.| .||+|+
T Consensus 170 --~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi 246 (373)
T 2qm3_A 170 --DLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFI 246 (373)
T ss_dssp --CSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEE
T ss_pred --CCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEE
Confidence 22467999999 99999999999999889999999 899998887 23489999999988433 499999
Q ss_pred ehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 261 LKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 261 ~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
+..++|... ...++++++++|+| ||++++++...
T Consensus 247 ~~~p~~~~~---~~~~l~~~~~~Lkp---gG~~~~~~~~~ 280 (373)
T 2qm3_A 247 TDPPETLEA---IRAFVGRGIATLKG---PRCAGYFGITR 280 (373)
T ss_dssp ECCCSSHHH---HHHHHHHHHHTBCS---TTCEEEEEECT
T ss_pred ECCCCchHH---HHHHHHHHHHHccc---CCeEEEEEEec
Confidence 987766442 37899999999999 89777776653
No 19
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.66 E-value=1.6e-15 Score=130.33 Aligned_cols=106 Identities=18% Similarity=0.333 Sum_probs=94.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh---cCCCeEEEeccCCC-CCC-CccEEEehhhhccC
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES---DLANLKYVGGDMFE-AIP-PADAVLLKWILHDW 268 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~---~~~rv~~~~~d~~~-~~p-~~D~~~~~~vlh~~ 268 (306)
.+..+|||||||+|.++..+++.+|..+++++|+ +.+++.+++ ...+++++.+|+.+ +.+ .||+|++..++|++
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~ 122 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYDMVVSALSIHHL 122 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCEEEEEEESCGGGS
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCceEEEEeCccccC
Confidence 4568999999999999999999999999999999 888988887 23489999999988 444 69999999999999
Q ss_pred CchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCCC
Q 021867 269 NDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENK 303 (306)
Q Consensus 269 ~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~~ 303 (306)
++++...+|++++++|+| ||++++.+...++.
T Consensus 123 ~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~ 154 (234)
T 3dtn_A 123 EDEDKKELYKRSYSILKE---SGIFINADLVHGET 154 (234)
T ss_dssp CHHHHHHHHHHHHHHEEE---EEEEEEEEECBCSS
T ss_pred CHHHHHHHHHHHHHhcCC---CcEEEEEEecCCCC
Confidence 998877899999999999 99999999876643
No 20
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.59 E-value=2.6e-14 Score=126.24 Aligned_cols=102 Identities=16% Similarity=0.327 Sum_probs=91.0
Q ss_pred CCCeEEEecCCc---cHHHHHHHHHCCCCeEEEecc-hHHHHhchh---cCCCeEEEeccCCCC------------C--C
Q 021867 196 GLNSLVDVGGGI---GTVAKAIAKAFPNLECTDFDL-PHVVNGLES---DLANLKYVGGDMFEA------------I--P 254 (306)
Q Consensus 196 ~~~~vlDvGgG~---G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~---~~~rv~~~~~d~~~~------------~--p 254 (306)
+..+|||||||+ |.++..+.+.+|+.+++++|+ |.+++.|++ ..++++++.+|++++ + .
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 457999999999 999888888999999999999 999999987 357899999999862 2 2
Q ss_pred CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 255 PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 255 ~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
.+|++++..+||++++++...+|++++++|+| ||+|+|.+...
T Consensus 157 ~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~p---GG~l~i~~~~~ 199 (274)
T 2qe6_A 157 RPAAIMLVGMLHYLSPDVVDRVVGAYRDALAP---GSYLFMTSLVD 199 (274)
T ss_dssp SCCEEEETTTGGGSCTTTHHHHHHHHHHHSCT---TCEEEEEEEBC
T ss_pred CCEEEEEechhhhCCcHHHHHHHHHHHHhCCC---CcEEEEEEecC
Confidence 58999999999999997788999999999999 99999998765
No 21
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.56 E-value=1.5e-14 Score=126.35 Aligned_cols=111 Identities=18% Similarity=0.323 Sum_probs=93.0
Q ss_pred HHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCC-CCC-
Q 021867 183 TRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFE-AIP- 254 (306)
Q Consensus 183 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~-~~p- 254 (306)
...+++.+. .....+|||||||+|.++..+++.++ +++++|+ +.+++.+++ ..++++++.+|+.+ +++
T Consensus 26 ~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~ 101 (260)
T 1vl5_A 26 LAKLMQIAA--LKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTD 101 (260)
T ss_dssp HHHHHHHHT--CCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCT
T ss_pred HHHHHHHhC--CCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCC
Confidence 344555554 45678999999999999999999876 8999998 888888876 23689999999988 665
Q ss_pred -CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCC
Q 021867 255 -PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIREN 302 (306)
Q Consensus 255 -~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~ 302 (306)
.||+|++..++|+++|. ..+|++++++|+| ||++++.+...++
T Consensus 102 ~~fD~V~~~~~l~~~~d~--~~~l~~~~r~Lkp---gG~l~~~~~~~~~ 145 (260)
T 1vl5_A 102 ERFHIVTCRIAAHHFPNP--ASFVSEAYRVLKK---GGQLLLVDNSAPE 145 (260)
T ss_dssp TCEEEEEEESCGGGCSCH--HHHHHHHHHHEEE---EEEEEEEEEEBCS
T ss_pred CCEEEEEEhhhhHhcCCH--HHHHHHHHHHcCC---CCEEEEEEcCCCC
Confidence 59999999999999986 4789999999999 9999999887654
No 22
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.56 E-value=4.7e-14 Score=119.39 Aligned_cols=103 Identities=18% Similarity=0.274 Sum_probs=90.3
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-cCCCeEEEeccCCCCCC--CccEEEehhhhccCC
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-DLANLKYVGGDMFEAIP--PADAVLLKWILHDWN 269 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-~~~rv~~~~~d~~~~~p--~~D~~~~~~vlh~~~ 269 (306)
.....+|||||||+|.++..+++. ..+++++|+ +.+++.+++ ..++++++.+|+.+..+ .||+|++..++|+++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~~~ 121 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWDAVFFAHWLAHVP 121 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEEEEEEESCGGGSC
T ss_pred CCCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCceeEEEEechhhcCC
Confidence 345679999999999999999998 568999999 888998887 34789999999988533 599999999999999
Q ss_pred chHHHHHHHHHHHhcCCCCCCcEEEEEeeecC
Q 021867 270 DEECVKILKKCKEAVTSDDKKGKVIIIDMIRE 301 (306)
Q Consensus 270 d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~ 301 (306)
+++...+|+++++.|+| ||++++.+...+
T Consensus 122 ~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~ 150 (218)
T 3ou2_A 122 DDRFEAFWESVRSAVAP---GGVVEFVDVTDH 150 (218)
T ss_dssp HHHHHHHHHHHHHHEEE---EEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHcCC---CeEEEEEeCCCC
Confidence 98788999999999999 999999987553
No 23
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.56 E-value=2.2e-14 Score=125.20 Aligned_cols=113 Identities=16% Similarity=0.338 Sum_probs=97.1
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhc---CCCeEEEeccCCC-CCC--Cc
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESD---LANLKYVGGDMFE-AIP--PA 256 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~---~~rv~~~~~d~~~-~~p--~~ 256 (306)
..+++.+. .....+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++. .++++++.+|+.+ +.+ .|
T Consensus 45 ~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~f 121 (266)
T 3ujc_A 45 KKILSDIE--LNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNF 121 (266)
T ss_dssp HHHTTTCC--CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCE
T ss_pred HHHHHhcC--CCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcE
Confidence 44455554 5667899999999999999999987 679999999 8888888872 2789999999988 655 59
Q ss_pred cEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCC
Q 021867 257 DAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIREN 302 (306)
Q Consensus 257 D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~ 302 (306)
|+|++..++|++++++...+|++++++|+| ||++++.+...++
T Consensus 122 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~ 164 (266)
T 3ujc_A 122 DLIYSRDAILALSLENKNKLFQKCYKWLKP---TGTLLITDYCATE 164 (266)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEE---EEEEEEEEEEESC
T ss_pred EEEeHHHHHHhcChHHHHHHHHHHHHHcCC---CCEEEEEEeccCC
Confidence 999999999999877788999999999999 9999999987654
No 24
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.56 E-value=3.8e-14 Score=120.40 Aligned_cols=111 Identities=14% Similarity=0.288 Sum_probs=93.8
Q ss_pred HHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-cCCCeEEEeccCCC-CCC-CccEEE
Q 021867 185 VVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-DLANLKYVGGDMFE-AIP-PADAVL 260 (306)
Q Consensus 185 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-~~~rv~~~~~d~~~-~~p-~~D~~~ 260 (306)
.+++.+. .....+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ...+++++.+|+.+ +.+ .||+|+
T Consensus 36 ~~l~~~~--~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~fD~v~ 111 (220)
T 3hnr_A 36 DILEDVV--NKSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVPTSIDTIV 111 (220)
T ss_dssp HHHHHHH--HTCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCCSCCSEEE
T ss_pred HHHHHhh--ccCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCCCCeEEEE
Confidence 3444444 346789999999999999999987 568999999 888888887 33599999999988 554 699999
Q ss_pred ehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCC
Q 021867 261 LKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIREN 302 (306)
Q Consensus 261 ~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~ 302 (306)
+..++|++++++...+|++++++|+| ||++++.+...+.
T Consensus 112 ~~~~l~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~ 150 (220)
T 3hnr_A 112 STYAFHHLTDDEKNVAIAKYSQLLNK---GGKIVFADTIFAD 150 (220)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHSCT---TCEEEEEEECBSS
T ss_pred ECcchhcCChHHHHHHHHHHHHhcCC---CCEEEEEeccccC
Confidence 99999999998877799999999999 9999999876543
No 25
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.55 E-value=1.4e-14 Score=123.50 Aligned_cols=100 Identities=15% Similarity=0.236 Sum_probs=87.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh----cCCCeEEEeccCCC-CCC--CccEEEehhhhc
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES----DLANLKYVGGDMFE-AIP--PADAVLLKWILH 266 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~----~~~rv~~~~~d~~~-~~p--~~D~~~~~~vlh 266 (306)
....+|||||||+|.++..+++.+| +++++|+ +.+++.+++ ...+++++.+|+.+ +.+ .+|+|++..++|
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~ 114 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIV 114 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGG
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchH
Confidence 3478999999999999999999987 8999999 888888876 34889999999988 554 599999999988
Q ss_pred cCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 267 DWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 267 ~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
.+..++...+|+++++.|+| ||++++.+..
T Consensus 115 ~~~~~~~~~~l~~~~~~L~~---gG~l~~~~~~ 144 (227)
T 1ve3_A 115 HFEPLELNQVFKEVRRVLKP---SGKFIMYFTD 144 (227)
T ss_dssp GCCHHHHHHHHHHHHHHEEE---EEEEEEEEEC
T ss_pred hCCHHHHHHHHHHHHHHcCC---CcEEEEEecC
Confidence 88777778999999999999 8999998765
No 26
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.54 E-value=2e-14 Score=124.74 Aligned_cols=112 Identities=21% Similarity=0.391 Sum_probs=93.8
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh---cCCCeEEEeccCCC-CCC--Cc
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES---DLANLKYVGGDMFE-AIP--PA 256 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~---~~~rv~~~~~d~~~-~~p--~~ 256 (306)
..+++.+. .....+|||||||+|.++..+++.. ..+++++|+ +.+++.+++ ...+++++.+|+.+ +.+ .|
T Consensus 83 ~~~l~~l~--~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~f 159 (254)
T 1xtp_A 83 RNFIASLP--GHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTY 159 (254)
T ss_dssp HHHHHTST--TCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCE
T ss_pred HHHHHhhc--ccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCe
Confidence 34455554 4567899999999999999999887 557999998 888988887 22689999999987 554 59
Q ss_pred cEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecC
Q 021867 257 DAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRE 301 (306)
Q Consensus 257 D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~ 301 (306)
|+|++.+++|++++++...+|++++++|+| ||+++|.+....
T Consensus 160 D~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~ 201 (254)
T 1xtp_A 160 DLIVIQWTAIYLTDADFVKFFKHCQQALTP---NGYIFFKENCST 201 (254)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEE---EEEEEEEEEBC-
T ss_pred EEEEEcchhhhCCHHHHHHHHHHHHHhcCC---CeEEEEEecCCC
Confidence 999999999999988888999999999999 999999986543
No 27
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.53 E-value=5.1e-14 Score=119.58 Aligned_cols=102 Identities=15% Similarity=0.100 Sum_probs=87.2
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhc-----C-----CCeEEEeccCCC-CCC--CccEE
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESD-----L-----ANLKYVGGDMFE-AIP--PADAV 259 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~-----~-----~rv~~~~~d~~~-~~p--~~D~~ 259 (306)
..+..+|||||||+|.++..+++++|..+++++|+ +.+++.+++. . .+++++.+|+.. +.+ .||+|
T Consensus 27 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 106 (217)
T 3jwh_A 27 QSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAA 106 (217)
T ss_dssp HTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEE
T ss_pred hcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEE
Confidence 34568999999999999999999999899999999 8888888761 1 289999999866 333 59999
Q ss_pred EehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 260 LLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 260 ~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
++..++|++++++...+|+++++.|+| ||.+++...
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~Lkp---gG~li~~~~ 142 (217)
T 3jwh_A 107 TVIEVIEHLDLSRLGAFERVLFEFAQP---KIVIVTTPN 142 (217)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTCC---SEEEEEEEB
T ss_pred eeHHHHHcCCHHHHHHHHHHHHHHcCC---CEEEEEccC
Confidence 999999999988888999999999999 886666543
No 28
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.53 E-value=4.7e-14 Score=119.93 Aligned_cols=100 Identities=12% Similarity=0.116 Sum_probs=85.9
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhc------C----CCeEEEeccCCC-CCC--CccEEE
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESD------L----ANLKYVGGDMFE-AIP--PADAVL 260 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~------~----~rv~~~~~d~~~-~~p--~~D~~~ 260 (306)
.+..+|||||||+|.++..+++.+|..+++++|+ +.+++.+++. . .+++++.+|+.. +.+ .||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 4568999999999999999999999899999999 8888888761 1 289999999966 332 599999
Q ss_pred ehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 261 LKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 261 ~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
+..++|++++++..++|+++++.|+| ||.+++..
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~Lkp---gG~~i~~~ 141 (219)
T 3jwg_A 108 VIEVIEHLDENRLQAFEKVLFEFTRP---QTVIVSTP 141 (219)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCC---SEEEEEEE
T ss_pred EHHHHHhCCHHHHHHHHHHHHHhhCC---CEEEEEcc
Confidence 99999999998888999999999999 78555543
No 29
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.53 E-value=4e-14 Score=119.70 Aligned_cols=97 Identities=22% Similarity=0.325 Sum_probs=85.3
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCC-CCC--CccEEEehhhhcc
Q 021867 198 NSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFE-AIP--PADAVLLKWILHD 267 (306)
Q Consensus 198 ~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~-~~p--~~D~~~~~~vlh~ 267 (306)
.+|||||||+|.++..+++. |+.+++++|+ +.+++.+++ ..++++++.+|+.+ +++ .||+|++..++|+
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 123 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFF 123 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGG
T ss_pred CEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhh
Confidence 39999999999999999998 8889999999 888888876 25689999999998 655 4999999999999
Q ss_pred CCchHHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 268 WNDEECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 268 ~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
+++. ..+|+++++.|+| ||+++|.+...
T Consensus 124 ~~~~--~~~l~~~~~~L~p---gG~l~~~~~~~ 151 (219)
T 3dlc_A 124 WEDV--ATAFREIYRILKS---GGKTYIGGGFG 151 (219)
T ss_dssp CSCH--HHHHHHHHHHEEE---EEEEEEEECCS
T ss_pred ccCH--HHHHHHHHHhCCC---CCEEEEEeccC
Confidence 9775 5789999999999 89999987543
No 30
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.53 E-value=7.8e-14 Score=124.13 Aligned_cols=103 Identities=18% Similarity=0.337 Sum_probs=89.9
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCC-CCC--CccEEEehh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFE-AIP--PADAVLLKW 263 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~-~~p--~~D~~~~~~ 263 (306)
+....+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++ ..++++++.+|+.+ |++ .||+|++..
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 158 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQD 158 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecc
Confidence 4567899999999999999999987 469999999 788888776 34789999999998 665 499999999
Q ss_pred hhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCC
Q 021867 264 ILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIREN 302 (306)
Q Consensus 264 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~ 302 (306)
++|++++. ..+|++++++|+| ||++++.+...++
T Consensus 159 ~l~~~~~~--~~~l~~~~~~Lkp---gG~l~~~~~~~~~ 192 (297)
T 2o57_A 159 AFLHSPDK--LKVFQECARVLKP---RGVMAITDPMKED 192 (297)
T ss_dssp CGGGCSCH--HHHHHHHHHHEEE---EEEEEEEEEEECT
T ss_pred hhhhcCCH--HHHHHHHHHHcCC---CeEEEEEEeccCC
Confidence 99999984 6889999999999 9999999987654
No 31
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.52 E-value=7.3e-14 Score=121.40 Aligned_cols=111 Identities=10% Similarity=0.077 Sum_probs=92.7
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCC-CCC-
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFE-AIP- 254 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~-~~p- 254 (306)
..+++.+. .....+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++ ..++|+++.+|+.+ +.+
T Consensus 26 ~~l~~~~~--~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 102 (256)
T 1nkv_A 26 ATLGRVLR--MKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANE 102 (256)
T ss_dssp HHHHHHTC--CCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSS
T ss_pred HHHHHhcC--CCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcCC
Confidence 34455444 5667899999999999999999988 678999999 888888876 23689999999988 443
Q ss_pred CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCC
Q 021867 255 PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIREN 302 (306)
Q Consensus 255 ~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~ 302 (306)
.||+|++..++|++++. ..+|++++++|+| ||++++.+.....
T Consensus 103 ~fD~V~~~~~~~~~~~~--~~~l~~~~r~Lkp---gG~l~~~~~~~~~ 145 (256)
T 1nkv_A 103 KCDVAACVGATWIAGGF--AGAEELLAQSLKP---GGIMLIGEPYWRQ 145 (256)
T ss_dssp CEEEEEEESCGGGTSSS--HHHHHHHTTSEEE---EEEEEEEEEEETT
T ss_pred CCCEEEECCChHhcCCH--HHHHHHHHHHcCC---CeEEEEecCcccC
Confidence 59999999999999875 5789999999999 9999999876543
No 32
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.52 E-value=1.2e-13 Score=122.35 Aligned_cols=113 Identities=12% Similarity=0.197 Sum_probs=94.0
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCCCCCCc
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFEAIPPA 256 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~~~p~~ 256 (306)
..+++.+. .....+|||||||+|.++..+++.++. +++++|+ +.+++.+++ ..+++++..+|+.+....|
T Consensus 54 ~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~f 130 (287)
T 1kpg_A 54 DLALGKLG--LQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPV 130 (287)
T ss_dssp HHHHTTTT--CCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCC
T ss_pred HHHHHHcC--CCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCe
Confidence 34555555 566789999999999999999977754 9999999 888888876 2468999999997621469
Q ss_pred cEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCC
Q 021867 257 DAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIREN 302 (306)
Q Consensus 257 D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~ 302 (306)
|+|++..++|++++++...+|++++++|+| ||++++.+...++
T Consensus 131 D~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~ 173 (287)
T 1kpg_A 131 DRIVSIGAFEHFGHERYDAFFSLAHRLLPA---DGVMLLHTITGLH 173 (287)
T ss_dssp SEEEEESCGGGTCTTTHHHHHHHHHHHSCT---TCEEEEEEEEECC
T ss_pred eEEEEeCchhhcChHHHHHHHHHHHHhcCC---CCEEEEEEecCCC
Confidence 999999999999776678899999999999 9999999887653
No 33
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.52 E-value=7.5e-14 Score=117.75 Aligned_cols=101 Identities=8% Similarity=0.029 Sum_probs=85.5
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh--c---------------CCCeEEEeccCCC-CCC
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES--D---------------LANLKYVGGDMFE-AIP 254 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~--~---------------~~rv~~~~~d~~~-~~p 254 (306)
.....+|||+|||+|..+..|+++ ..+++++|+ +.+++.|++ . ..+|+++.+|+++ +.+
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 356789999999999999999997 468999999 889998876 1 3689999999998 432
Q ss_pred ---CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 255 ---PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 255 ---~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
.||+|+.+.++|++++++..+++++++++|+| ||+++++...
T Consensus 98 ~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkp---gG~~~l~~~~ 142 (203)
T 1pjz_A 98 DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQ---ACSGLLITLE 142 (203)
T ss_dssp HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCS---EEEEEEEEES
T ss_pred cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCC---CcEEEEEEEe
Confidence 59999999999999987777899999999999 8985555433
No 34
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.52 E-value=6.3e-14 Score=118.96 Aligned_cols=113 Identities=19% Similarity=0.325 Sum_probs=95.1
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHC-CCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCC-CCC-
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAF-PNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFE-AIP- 254 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~-~~p- 254 (306)
..+++.+. .....+|||||||+|.++..+++.+ |..+++++|+ +.+++.+++ ..+++++..+|+.+ +.+
T Consensus 27 ~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~ 104 (219)
T 3dh0_A 27 EKVLKEFG--LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPD 104 (219)
T ss_dssp HHHHHHHT--CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCS
T ss_pred HHHHHHhC--CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCC
Confidence 34555554 5667899999999999999999997 8889999999 888888876 34589999999988 554
Q ss_pred -CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCCC
Q 021867 255 -PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENK 303 (306)
Q Consensus 255 -~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~~ 303 (306)
.||+|++..++|++++. ..+|+++++.|+| ||++++.+....+.
T Consensus 105 ~~fD~v~~~~~l~~~~~~--~~~l~~~~~~Lkp---gG~l~i~~~~~~~~ 149 (219)
T 3dh0_A 105 NTVDFIFMAFTFHELSEP--LKFLEELKRVAKP---FAYLAIIDWKKEER 149 (219)
T ss_dssp SCEEEEEEESCGGGCSSH--HHHHHHHHHHEEE---EEEEEEEEECSSCC
T ss_pred CCeeEEEeehhhhhcCCH--HHHHHHHHHHhCC---CeEEEEEEeccccc
Confidence 49999999999999875 5789999999999 99999998766543
No 35
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.51 E-value=1.2e-13 Score=121.31 Aligned_cols=111 Identities=23% Similarity=0.275 Sum_probs=94.4
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCC-CCC-
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFE-AIP- 254 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~-~~p- 254 (306)
..+++.+. .....+|||||||+|.++..+++.+ ..+++++|+ +.+++.+++ ..++++++.+|+.+ +++
T Consensus 51 ~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 127 (273)
T 3bus_A 51 DEMIALLD--VRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFED 127 (273)
T ss_dssp HHHHHHSC--CCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCT
T ss_pred HHHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCC
Confidence 45556555 5677899999999999999999987 679999999 788888775 35689999999988 655
Q ss_pred -CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCC
Q 021867 255 -PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIREN 302 (306)
Q Consensus 255 -~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~ 302 (306)
.||+|++..++|++++. ..+|++++++|+| ||+++|.+.....
T Consensus 128 ~~fD~v~~~~~l~~~~~~--~~~l~~~~~~L~p---gG~l~i~~~~~~~ 171 (273)
T 3bus_A 128 ASFDAVWALESLHHMPDR--GRALREMARVLRP---GGTVAIADFVLLA 171 (273)
T ss_dssp TCEEEEEEESCTTTSSCH--HHHHHHHHTTEEE---EEEEEEEEEEESS
T ss_pred CCccEEEEechhhhCCCH--HHHHHHHHHHcCC---CeEEEEEEeeccC
Confidence 49999999999999876 5789999999999 9999999987653
No 36
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.51 E-value=1.2e-13 Score=120.72 Aligned_cols=103 Identities=18% Similarity=0.202 Sum_probs=87.0
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhcCCCeEEEeccCCC-CCC-CccEEEehh-hhccCC
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESDLANLKYVGGDMFE-AIP-PADAVLLKW-ILHDWN 269 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~-~~p-~~D~~~~~~-vlh~~~ 269 (306)
..+..+|||||||+|.++..+++..+ +++++|+ +.+++.|++...+++++.+|+.+ +.+ .||+|++.. ++|+++
T Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~ 125 (263)
T 3pfg_A 48 SPKAASLLDVACGTGMHLRHLADSFG--TVEGLELSADMLAIARRRNPDAVLHHGDMRDFSLGRRFSAVTCMFSSIGHLA 125 (263)
T ss_dssp CTTCCEEEEETCTTSHHHHHHTTTSS--EEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCCSCCEEEEEECTTGGGGSC
T ss_pred CCCCCcEEEeCCcCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhhCCCCEEEECChHHCCccCCcCEEEEcCchhhhcC
Confidence 34568999999999999999998854 7999999 88999998755699999999988 545 599999998 999986
Q ss_pred c-hHHHHHHHHHHHhcCCCCCCcEEEEEeeecC
Q 021867 270 D-EECVKILKKCKEAVTSDDKKGKVIIIDMIRE 301 (306)
Q Consensus 270 d-~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~ 301 (306)
+ ++...+|++++++|+| ||+++|.+...+
T Consensus 126 ~~~~~~~~l~~~~~~L~p---gG~l~i~~~~~~ 155 (263)
T 3pfg_A 126 GQAELDAALERFAAHVLP---DGVVVVEPWWFP 155 (263)
T ss_dssp HHHHHHHHHHHHHHTEEE---EEEEEECCCCCT
T ss_pred CHHHHHHHHHHHHHhcCC---CcEEEEEeccCh
Confidence 5 5667899999999999 898888654333
No 37
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.50 E-value=1.4e-13 Score=118.75 Aligned_cols=110 Identities=19% Similarity=0.412 Sum_probs=92.2
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCC-CCC--
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFE-AIP-- 254 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~-~~p-- 254 (306)
..+++.+. .....+|||||||+|.++..+++.++ +++++|+ +.+++.+++ ..++++++.+|+.+ +.+
T Consensus 11 ~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 86 (239)
T 1xxl_A 11 GLMIKTAE--CRAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDD 86 (239)
T ss_dssp HHHHHHHT--CCTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTT
T ss_pred chHHHHhC--cCCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCC
Confidence 33444444 56778999999999999999999875 7999999 888888776 34689999999987 554
Q ss_pred CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCC
Q 021867 255 PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIREN 302 (306)
Q Consensus 255 ~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~ 302 (306)
.||+|++..++|+|++. ..+|++++++|+| ||++++.+...++
T Consensus 87 ~fD~v~~~~~l~~~~~~--~~~l~~~~~~Lkp---gG~l~~~~~~~~~ 129 (239)
T 1xxl_A 87 SFDIITCRYAAHHFSDV--RKAVREVARVLKQ---DGRFLLVDHYAPE 129 (239)
T ss_dssp CEEEEEEESCGGGCSCH--HHHHHHHHHHEEE---EEEEEEEEECBCS
T ss_pred cEEEEEECCchhhccCH--HHHHHHHHHHcCC---CcEEEEEEcCCCC
Confidence 49999999999999875 5789999999999 9999999887654
No 38
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.50 E-value=2.3e-13 Score=121.55 Aligned_cols=113 Identities=14% Similarity=0.209 Sum_probs=95.1
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCCCCCCc
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFEAIPPA 256 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~~~p~~ 256 (306)
..+++.+. .....+|||||||+|.++..+++.++ .+++++|+ +.+++.|++ ..++|+++.+|+.+....|
T Consensus 62 ~~~~~~~~--~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~f 138 (302)
T 3hem_A 62 KLALDKLN--LEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPV 138 (302)
T ss_dssp HHHHHTTC--CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCC
T ss_pred HHHHHHcC--CCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcCCCc
Confidence 44555555 56678999999999999999999987 79999999 888888876 3458999999997752369
Q ss_pred cEEEehhhhccCCc-------hHHHHHHHHHHHhcCCCCCCcEEEEEeeecCC
Q 021867 257 DAVLLKWILHDWND-------EECVKILKKCKEAVTSDDKKGKVIIIDMIREN 302 (306)
Q Consensus 257 D~~~~~~vlh~~~d-------~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~ 302 (306)
|+|++..++|+++| +....+|++++++|+| ||+++|.+...++
T Consensus 139 D~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~ 188 (302)
T 3hem_A 139 DRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPD---DGRMLLHTITIPD 188 (302)
T ss_dssp SEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCT---TCEEEEEEEECCC
T ss_pred cEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCC---CcEEEEEEEeccC
Confidence 99999999999955 4567899999999999 9999999887654
No 39
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.50 E-value=9.6e-14 Score=120.03 Aligned_cols=103 Identities=17% Similarity=0.210 Sum_probs=89.8
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh--cCCCeEEEeccCCC-CCC-------CccEEEeh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES--DLANLKYVGGDMFE-AIP-------PADAVLLK 262 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~--~~~rv~~~~~d~~~-~~p-------~~D~~~~~ 262 (306)
.....+|||||||+|.++..+++.++ +++++|+ +.+++.+++ ...+++++.+|+.+ +.+ .+|+|++.
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEc
Confidence 35567899999999999999999988 7899999 888998887 44589999999998 322 28999999
Q ss_pred hhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecC
Q 021867 263 WILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRE 301 (306)
Q Consensus 263 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~ 301 (306)
.++|++++++...+|++++++|+| ||+++|++...+
T Consensus 132 ~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~ 167 (245)
T 3ggd_A 132 TGFHHIPVEKRELLGQSLRILLGK---QGAMYLIELGTG 167 (245)
T ss_dssp SSSTTSCGGGHHHHHHHHHHHHTT---TCEEEEEEECTT
T ss_pred chhhcCCHHHHHHHHHHHHHHcCC---CCEEEEEeCCcc
Confidence 999999987788999999999999 999999987644
No 40
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.50 E-value=2.9e-13 Score=121.54 Aligned_cols=120 Identities=10% Similarity=0.039 Sum_probs=96.1
Q ss_pred HHhchhhhHHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEec
Q 021867 175 MASDARLATRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGG 247 (306)
Q Consensus 175 m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~ 247 (306)
+..........+++.+. .+....+|||||||+|.++..+++++ ..+++++|+ +.+++.|++ ..++++++.+
T Consensus 97 ~~~~~~~~~~~l~~~l~-~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~ 174 (312)
T 3vc1_A 97 LHRLESAQAEFLMDHLG-QAGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVC 174 (312)
T ss_dssp HHHHHHHHHHHHHTTSC-CCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC
T ss_pred hhhHHHHHHHHHHHHhc-cCCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEEC
Confidence 33333333344555543 14567899999999999999999986 578999999 888888876 3468999999
Q ss_pred cCCC-CCC--CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCC
Q 021867 248 DMFE-AIP--PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIREN 302 (306)
Q Consensus 248 d~~~-~~p--~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~ 302 (306)
|+.+ +++ .||+|++..++|+++ ...+|++++++|+| ||++++++....+
T Consensus 175 d~~~~~~~~~~fD~V~~~~~l~~~~---~~~~l~~~~~~Lkp---gG~l~~~~~~~~~ 226 (312)
T 3vc1_A 175 NMLDTPFDKGAVTASWNNESTMYVD---LHDLFSEHSRFLKV---GGRYVTITGCWNP 226 (312)
T ss_dssp CTTSCCCCTTCEEEEEEESCGGGSC---HHHHHHHHHHHEEE---EEEEEEEEEEECT
T ss_pred ChhcCCCCCCCEeEEEECCchhhCC---HHHHHHHHHHHcCC---CcEEEEEEccccc
Confidence 9998 655 599999999999994 46899999999999 9999999987665
No 41
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.49 E-value=2.2e-13 Score=113.54 Aligned_cols=111 Identities=16% Similarity=0.211 Sum_probs=92.2
Q ss_pred HHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCC-CCC-Cc
Q 021867 185 VVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFE-AIP-PA 256 (306)
Q Consensus 185 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~-~~p-~~ 256 (306)
.+++.+. .....+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..+++++..+|+.+ +.+ .|
T Consensus 23 ~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 98 (199)
T 2xvm_A 23 EVLEAVK--VVKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQY 98 (199)
T ss_dssp HHHHHTT--TSCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCCE
T ss_pred HHHHHhh--ccCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCCc
Confidence 3444444 345679999999999999999987 568999999 888888776 23579999999987 444 59
Q ss_pred cEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCC
Q 021867 257 DAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIREN 302 (306)
Q Consensus 257 D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~ 302 (306)
|+|++..++|++++++...+|+++++.|+| ||++++++...++
T Consensus 99 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~---gG~l~~~~~~~~~ 141 (199)
T 2xvm_A 99 DFILSTVVLMFLEAKTIPGLIANMQRCTKP---GGYNLIVAAMDTA 141 (199)
T ss_dssp EEEEEESCGGGSCGGGHHHHHHHHHHTEEE---EEEEEEEEEBCCS
T ss_pred eEEEEcchhhhCCHHHHHHHHHHHHHhcCC---CeEEEEEEeeccC
Confidence 999999999999977788999999999999 8999998876544
No 42
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.49 E-value=2.7e-13 Score=121.88 Aligned_cols=113 Identities=14% Similarity=0.252 Sum_probs=95.0
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCCCCCCc
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFEAIPPA 256 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~~~p~~ 256 (306)
..+++.+. .....+|||||||+|.++..+++.+ +.+++++|+ +.+++.+++ ..++++++.+|+.+....|
T Consensus 80 ~~~~~~~~--~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~f 156 (318)
T 2fk8_A 80 DLNLDKLD--LKPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPV 156 (318)
T ss_dssp HHHHTTSC--CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCC
T ss_pred HHHHHhcC--CCCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCc
Confidence 44555555 5667899999999999999999987 569999999 888888876 2367999999987622469
Q ss_pred cEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCC
Q 021867 257 DAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIREN 302 (306)
Q Consensus 257 D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~ 302 (306)
|+|++..++|++++++...+|++++++|+| ||++++.+...++
T Consensus 157 D~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~ 199 (318)
T 2fk8_A 157 DRIVSIEAFEHFGHENYDDFFKRCFNIMPA---DGRMTVQSSVSYH 199 (318)
T ss_dssp SEEEEESCGGGTCGGGHHHHHHHHHHHSCT---TCEEEEEEEECCC
T ss_pred CEEEEeChHHhcCHHHHHHHHHHHHHhcCC---CcEEEEEEeccCC
Confidence 999999999999877778999999999999 9999999887654
No 43
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.49 E-value=1.4e-13 Score=121.16 Aligned_cols=101 Identities=22% Similarity=0.445 Sum_probs=89.4
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCC-CCC--CccEEEehhh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFE-AIP--PADAVLLKWI 264 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~-~~p--~~D~~~~~~v 264 (306)
+....+|||||||+|.++..+++.+|..+++++|+ +.+++.+++ ..+++++..+|+.+ +.+ .||+|++.++
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFV 114 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESC
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEech
Confidence 46678999999999999999999999999999999 888888876 34689999999988 554 5999999999
Q ss_pred hccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 265 LHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 265 lh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
+|++++.. .+|++++++|+| ||++++.+..
T Consensus 115 l~~~~~~~--~~l~~~~~~L~p---gG~l~~~~~~ 144 (276)
T 3mgg_A 115 LEHLQSPE--EALKSLKKVLKP---GGTITVIEGD 144 (276)
T ss_dssp GGGCSCHH--HHHHHHHHHEEE---EEEEEEEEEC
T ss_pred hhhcCCHH--HHHHHHHHHcCC---CcEEEEEEcC
Confidence 99999874 789999999999 8999998753
No 44
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.48 E-value=1.2e-13 Score=120.91 Aligned_cols=98 Identities=11% Similarity=0.168 Sum_probs=84.0
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhcCCCeEEEeccCCC-CCC--CccEEEehhhhccCCc
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESDLANLKYVGGDMFE-AIP--PADAVLLKWILHDWND 270 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~-~~p--~~D~~~~~~vlh~~~d 270 (306)
....+|||||||+|.++..|++.+ .+++++|+ +.+++.|+ ..++|+++.+|+.+ +++ .+|+|++..++|.++.
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~-~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~~~ 114 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQAL-RHPRVTYAVAPAEDTGLPPASVDVAIAAQAMHWFDL 114 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCC-CCTTEEEEECCTTCCCCCSSCEEEEEECSCCTTCCH
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhh-hcCCceeehhhhhhhcccCCcccEEEEeeehhHhhH
Confidence 445789999999999999999886 47899999 88999988 46789999999988 666 4999999999987654
Q ss_pred hHHHHHHHHHHHhcCCCCCCcEEEEEeeecC
Q 021867 271 EECVKILKKCKEAVTSDDKKGKVIIIDMIRE 301 (306)
Q Consensus 271 ~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~ 301 (306)
+ +++++++++||| ||+|+++....+
T Consensus 115 ~---~~~~e~~rvLkp---gG~l~~~~~~~~ 139 (257)
T 4hg2_A 115 D---RFWAELRRVARP---GAVFAAVTYGLT 139 (257)
T ss_dssp H---HHHHHHHHHEEE---EEEEEEEEECCC
T ss_pred H---HHHHHHHHHcCC---CCEEEEEECCCC
Confidence 3 679999999999 999999876544
No 45
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.48 E-value=2.6e-13 Score=117.07 Aligned_cols=98 Identities=19% Similarity=0.386 Sum_probs=84.9
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhcCCCeEEEeccCCC---CCC--CccEEEehhhhcc
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESDLANLKYVGGDMFE---AIP--PADAVLLKWILHD 267 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~---~~p--~~D~~~~~~vlh~ 267 (306)
+.+..+|||||||+|.++..+++. +.+++++|+ +.+++.+++ +++++.+|+.+ +++ .||+|++..++|+
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~---~~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~ 113 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEG---KFNVVKSDAIEYLKSLPDKYLDGVMISHFVEH 113 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHT---TSEEECSCHHHHHHTSCTTCBSEEEEESCGGG
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHh---hcceeeccHHHHhhhcCCCCeeEEEECCchhh
Confidence 456789999999999999999998 457899999 888888873 39999999876 544 5999999999999
Q ss_pred CCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 268 WNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 268 ~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
+++++...+|++++++|+| ||++++....
T Consensus 114 ~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~ 142 (240)
T 3dli_A 114 LDPERLFELLSLCYSKMKY---SSYIVIESPN 142 (240)
T ss_dssp SCGGGHHHHHHHHHHHBCT---TCCEEEEEEC
T ss_pred CCcHHHHHHHHHHHHHcCC---CcEEEEEeCC
Confidence 9988788999999999999 8999987654
No 46
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.48 E-value=1.2e-13 Score=118.83 Aligned_cols=101 Identities=18% Similarity=0.179 Sum_probs=87.1
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCCCCC--CccEEEehhhhcc
Q 021867 197 LNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFEAIP--PADAVLLKWILHD 267 (306)
Q Consensus 197 ~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~~~p--~~D~~~~~~vlh~ 267 (306)
..+|||||||+|.++..+++ +..+++++|+ +.+++.+++ ...+++++.+|+.+..+ .||+|++..++|+
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCA 144 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTT
T ss_pred CCCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhc
Confidence 35999999999999999976 5678999999 888888877 23569999999998333 5999999999999
Q ss_pred CCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCC
Q 021867 268 WNDEECVKILKKCKEAVTSDDKKGKVIIIDMIREN 302 (306)
Q Consensus 268 ~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~ 302 (306)
+++++...+|++++++|+| ||++++++....+
T Consensus 145 ~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~ 176 (235)
T 3lcc_A 145 IEPEMRPAWAKSMYELLKP---DGELITLMYPITD 176 (235)
T ss_dssp SCGGGHHHHHHHHHHHEEE---EEEEEEEECCCSC
T ss_pred CCHHHHHHHHHHHHHHCCC---CcEEEEEEecccc
Confidence 9987788999999999999 8999998876544
No 47
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.48 E-value=8.7e-14 Score=116.75 Aligned_cols=100 Identities=15% Similarity=0.173 Sum_probs=87.9
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhcCCCeEEEeccCCC-CCC--CccEEEehhhhccCCchH
Q 021867 197 LNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESDLANLKYVGGDMFE-AIP--PADAVLLKWILHDWNDEE 272 (306)
Q Consensus 197 ~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~-~~p--~~D~~~~~~vlh~~~d~~ 272 (306)
..+|||||||+|.++..+++. +.+++++|+ +.+++.+++...+++++.+|+.+ +.+ .||+|++..++|++++++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~ 119 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGE 119 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTT
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHH
Confidence 679999999999999999988 558999999 88899888766789999999988 544 599999999999998777
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEEEeeecC
Q 021867 273 CVKILKKCKEAVTSDDKKGKVIIIDMIRE 301 (306)
Q Consensus 273 ~~~iL~~~~~~L~p~~~gg~lli~e~~~~ 301 (306)
...+|++++++|+| ||++++.+...+
T Consensus 120 ~~~~l~~~~~~L~p---gG~l~i~~~~~~ 145 (203)
T 3h2b_A 120 LPDALVALRMAVED---GGGLLMSFFSGP 145 (203)
T ss_dssp HHHHHHHHHHTEEE---EEEEEEEEECCS
T ss_pred HHHHHHHHHHHcCC---CcEEEEEEccCC
Confidence 78999999999999 899998876543
No 48
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.47 E-value=1.9e-13 Score=121.06 Aligned_cols=101 Identities=19% Similarity=0.256 Sum_probs=89.0
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCC-CeEEEecc-hHHHHhchh----cCCCeEEEeccCCC-CCC-CccEEEehhhh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPN-LECTDFDL-PHVVNGLES----DLANLKYVGGDMFE-AIP-PADAVLLKWIL 265 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~-~~~~~~Dl-~~~~~~a~~----~~~rv~~~~~d~~~-~~p-~~D~~~~~~vl 265 (306)
..+..+|||||||+|.++..+++.+|. .+++++|+ +.+++.+++ ...++++..+|+.+ +.+ .||+|++..++
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l 99 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDKYDIAICHAFL 99 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCSSCEEEEEEESCG
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcCCCeeEEEECChh
Confidence 456789999999999999999999995 89999999 888888776 33489999999998 555 59999999999
Q ss_pred ccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 266 HDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 266 h~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
|++++. ..+|+++++.|+| ||++++.++.
T Consensus 100 ~~~~~~--~~~l~~~~~~Lkp---gG~l~~~~~~ 128 (284)
T 3gu3_A 100 LHMTTP--ETMLQKMIHSVKK---GGKIICFEPH 128 (284)
T ss_dssp GGCSSH--HHHHHHHHHTEEE---EEEEEEEECC
T ss_pred hcCCCH--HHHHHHHHHHcCC---CCEEEEEecc
Confidence 999886 4789999999999 9999999875
No 49
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.46 E-value=3.4e-13 Score=120.27 Aligned_cols=99 Identities=20% Similarity=0.232 Sum_probs=86.1
Q ss_pred cCCCeEEEecCCccHHHHHHHHHC-CCCeEEEecc-hHHHHhchh----c---CCCeEEEeccCCC-CC--------CCc
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAF-PNLECTDFDL-PHVVNGLES----D---LANLKYVGGDMFE-AI--------PPA 256 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-~~~~~~a~~----~---~~rv~~~~~d~~~-~~--------p~~ 256 (306)
....+|||||||+|.++..+++.+ +..+++++|+ +.+++.|++ . .++++++.+|+.+ +. ..|
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 467899999999999999999987 8899999999 888888876 2 6799999999987 42 249
Q ss_pred cEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 257 DAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 257 D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
|+|++..++|++ + ...+|+++++.|+| ||+|++.+..
T Consensus 115 D~V~~~~~l~~~-~--~~~~l~~~~~~Lkp---gG~l~i~~~~ 151 (299)
T 3g5t_A 115 DMITAVECAHWF-D--FEKFQRSAYANLRK---DGTIAIWGYA 151 (299)
T ss_dssp EEEEEESCGGGS-C--HHHHHHHHHHHEEE---EEEEEEEEEE
T ss_pred eEEeHhhHHHHh-C--HHHHHHHHHHhcCC---CcEEEEEecC
Confidence 999999999999 4 36889999999999 8999995543
No 50
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.46 E-value=2.1e-13 Score=118.65 Aligned_cols=107 Identities=15% Similarity=0.190 Sum_probs=91.9
Q ss_pred HHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhcCCCeEEEeccCCC-CCC-CccEEEe
Q 021867 185 VVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESDLANLKYVGGDMFE-AIP-PADAVLL 261 (306)
Q Consensus 185 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~-~~p-~~D~~~~ 261 (306)
.+++.+. .....+|||||||+|.++..+++.+|..+++++|+ +.+++.+++..++++++.+|+.+ +.+ .||+|++
T Consensus 24 ~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~ 101 (259)
T 2p35_A 24 DLLAQVP--LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWKPAQKADLLYA 101 (259)
T ss_dssp HHHTTCC--CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCCCSSCEEEEEE
T ss_pred HHHHhcC--CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcCccCCcCEEEE
Confidence 4555554 45678999999999999999999999999999999 88898888656789999999987 422 5999999
Q ss_pred hhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 262 KWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 262 ~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
..++|++++. ..+|+++++.|+| ||++++.+.
T Consensus 102 ~~~l~~~~~~--~~~l~~~~~~L~p---gG~l~~~~~ 133 (259)
T 2p35_A 102 NAVFQWVPDH--LAVLSQLMDQLES---GGVLAVQMP 133 (259)
T ss_dssp ESCGGGSTTH--HHHHHHHGGGEEE---EEEEEEEEE
T ss_pred eCchhhCCCH--HHHHHHHHHhcCC---CeEEEEEeC
Confidence 9999999775 5789999999999 899998874
No 51
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.46 E-value=3.9e-13 Score=116.74 Aligned_cols=104 Identities=19% Similarity=0.143 Sum_probs=87.8
Q ss_pred HHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh--cCCCeEEEeccCCC-CCC--CccEE
Q 021867 186 VIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES--DLANLKYVGGDMFE-AIP--PADAV 259 (306)
Q Consensus 186 ~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~--~~~rv~~~~~d~~~-~~p--~~D~~ 259 (306)
+.+.++ .....+|||||||+|.++..+++..+. +++++|+ +.+++.+++ ...+++++.+|+.+ +.+ .||+|
T Consensus 36 l~~~~~--~~~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v 112 (253)
T 3g5l_A 36 LKKMLP--DFNQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVV 112 (253)
T ss_dssp HHTTCC--CCTTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEE
T ss_pred HHHhhh--ccCCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEE
Confidence 444444 346789999999999999999998765 8999999 889998887 35789999999987 554 59999
Q ss_pred EehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 260 LLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 260 ~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
++..++|++++. ..+|++++++|+| ||++++..
T Consensus 113 ~~~~~l~~~~~~--~~~l~~~~~~Lkp---gG~l~~~~ 145 (253)
T 3g5l_A 113 LSSLALHYIASF--DDICKKVYINLKS---SGSFIFSV 145 (253)
T ss_dssp EEESCGGGCSCH--HHHHHHHHHHEEE---EEEEEEEE
T ss_pred EEchhhhhhhhH--HHHHHHHHHHcCC---CcEEEEEe
Confidence 999999999765 5889999999999 89988864
No 52
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.46 E-value=4.5e-13 Score=116.43 Aligned_cols=101 Identities=14% Similarity=0.171 Sum_probs=87.1
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCC-CCC--CccEEEehh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFE-AIP--PADAVLLKW 263 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~-~~p--~~D~~~~~~ 263 (306)
.....+|||||||+|.++..+++.+|. +++++|+ +.+++.+++ ..++++++.+|+.+ +.+ .||+|++..
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 122 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEG 122 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecC
Confidence 456679999999999999999999986 9999999 888888776 35679999999977 554 599999999
Q ss_pred hhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecC
Q 021867 264 ILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRE 301 (306)
Q Consensus 264 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~ 301 (306)
++|++ +. ..+|+++++.|+| ||++++.+....
T Consensus 123 ~l~~~-~~--~~~l~~~~~~L~p---gG~l~~~~~~~~ 154 (257)
T 3f4k_A 123 AIYNI-GF--ERGMNEWSKYLKK---GGFIAVSEASWF 154 (257)
T ss_dssp CSCCC-CH--HHHHHHHHTTEEE---EEEEEEEEEEES
T ss_pred hHhhc-CH--HHHHHHHHHHcCC---CcEEEEEEeecc
Confidence 99998 33 5789999999999 999999997643
No 53
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.46 E-value=1.1e-13 Score=123.18 Aligned_cols=100 Identities=16% Similarity=0.259 Sum_probs=85.3
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhc------C----------------------------
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESD------L---------------------------- 239 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~------~---------------------------- 239 (306)
....+|||||||+|.++..+++.+|..+++++|+ +.+++.|++. .
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 4578999999999999999999999999999999 8888888761 1
Q ss_pred -----------------------------CCeEEEeccCCCCC--------CCccEEEehhhhccC----CchHHHHHHH
Q 021867 240 -----------------------------ANLKYVGGDMFEAI--------PPADAVLLKWILHDW----NDEECVKILK 278 (306)
Q Consensus 240 -----------------------------~rv~~~~~d~~~~~--------p~~D~~~~~~vlh~~----~d~~~~~iL~ 278 (306)
++|+|..+|+.... ..||+|++..+++++ +++...++|+
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 58999999998622 259999999999544 7778889999
Q ss_pred HHHHhcCCCCCCcEEEEEe
Q 021867 279 KCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 279 ~~~~~L~p~~~gg~lli~e 297 (306)
+++++|+| ||+|+|..
T Consensus 205 ~~~~~Lkp---GG~lil~~ 220 (292)
T 3g07_A 205 RIYRHLRP---GGILVLEP 220 (292)
T ss_dssp HHHHHEEE---EEEEEEEC
T ss_pred HHHHHhCC---CcEEEEec
Confidence 99999999 88887753
No 54
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.45 E-value=5.6e-13 Score=114.42 Aligned_cols=103 Identities=20% Similarity=0.228 Sum_probs=87.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhcCCCeEEEeccCCC-CCC-CccEEEe-hhhhccCCc
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESDLANLKYVGGDMFE-AIP-PADAVLL-KWILHDWND 270 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~-~~p-~~D~~~~-~~vlh~~~d 270 (306)
.+..+|||||||+|.++..+++.++ +++++|+ +.+++.+++..++++++.+|+.+ +.+ .||+|++ ..++|++++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~~~ 116 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRLGRKFSAVVSMFSSVGYLKT 116 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCSSCEEEEEECTTGGGGCCS
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcccCCCCcEEEEcCchHhhcCC
Confidence 4568999999999999999999987 7999999 89999988755789999999988 444 5999994 559988754
Q ss_pred -hHHHHHHHHHHHhcCCCCCCcEEEEEeeecCC
Q 021867 271 -EECVKILKKCKEAVTSDDKKGKVIIIDMIREN 302 (306)
Q Consensus 271 -~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~ 302 (306)
++...+|+++++.|+| ||++++.+...++
T Consensus 117 ~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~ 146 (239)
T 3bxo_A 117 TEELGAAVASFAEHLEP---GGVVVVEPWWFPE 146 (239)
T ss_dssp HHHHHHHHHHHHHTEEE---EEEEEECCCCCTT
T ss_pred HHHHHHHHHHHHHhcCC---CeEEEEEeccCcc
Confidence 6678899999999999 8999888766554
No 55
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.45 E-value=2.9e-13 Score=118.66 Aligned_cols=102 Identities=12% Similarity=0.130 Sum_probs=88.4
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCC-CCC--CccEEEehh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFE-AIP--PADAVLLKW 263 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~-~~p--~~D~~~~~~ 263 (306)
.....+|||||||+|.++..+++. |..+++++|+ +.+++.+++ ..++++++.+|+.+ +.+ .||+|++..
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~ 122 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEG 122 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESS
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcC
Confidence 456789999999999999999988 8889999999 888888876 34789999999988 554 599999999
Q ss_pred hhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCC
Q 021867 264 ILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIREN 302 (306)
Q Consensus 264 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~ 302 (306)
++|++ +. ..+|+++++.|+| ||++++.+.....
T Consensus 123 ~~~~~-~~--~~~l~~~~~~Lkp---gG~l~~~~~~~~~ 155 (267)
T 3kkz_A 123 AIYNI-GF--ERGLNEWRKYLKK---GGYLAVSECSWFT 155 (267)
T ss_dssp CGGGT-CH--HHHHHHHGGGEEE---EEEEEEEEEEESS
T ss_pred Cceec-CH--HHHHHHHHHHcCC---CCEEEEEEeeecC
Confidence 99999 43 5789999999999 9999999987543
No 56
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.45 E-value=1.8e-13 Score=118.14 Aligned_cols=102 Identities=19% Similarity=0.403 Sum_probs=88.8
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-c----CCCeEEEeccCCC-CCC--CccEEEehhhhc
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-D----LANLKYVGGDMFE-AIP--PADAVLLKWILH 266 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-~----~~rv~~~~~d~~~-~~p--~~D~~~~~~vlh 266 (306)
+..+|||||||+|.++..+++.+ ..+++++|+ +.+++.+++ . ..+++++.+|+.+ +.+ .||+|++.+++|
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 47899999999999999999887 568999999 888888887 1 3469999999877 444 499999999999
Q ss_pred cCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecC
Q 021867 267 DWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRE 301 (306)
Q Consensus 267 ~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~ 301 (306)
++++++...+|+++++.|+| ||++++.+...+
T Consensus 158 ~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~ 189 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLRP---NGIIVIKDNMAQ 189 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEEE---EEEEEEEEEEBS
T ss_pred hCCHHHHHHHHHHHHHhcCC---CeEEEEEEccCC
Confidence 99998878999999999999 999999987654
No 57
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.44 E-value=2.7e-13 Score=119.63 Aligned_cols=107 Identities=18% Similarity=0.222 Sum_probs=90.0
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhcCCCeEEEeccCCC-CCC-CccEEE
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESDLANLKYVGGDMFE-AIP-PADAVL 260 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~-~~p-~~D~~~ 260 (306)
..+++.+. .....+|||||||+|.++..+++ |..+++++|+ +.+++.+++..+++++..+|+.+ +.+ .||+|+
T Consensus 47 ~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~ 122 (279)
T 3ccf_A 47 EDLLQLLN--PQPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRVDKPLDAVF 122 (279)
T ss_dssp CHHHHHHC--CCTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCSSCEEEEE
T ss_pred HHHHHHhC--CCCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCcCCCcCEEE
Confidence 34445444 45678999999999999999998 7789999999 88899888755789999999988 554 599999
Q ss_pred ehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 261 LKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 261 ~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
+..++|++++. ..+|++++++|+| ||++++....
T Consensus 123 ~~~~l~~~~d~--~~~l~~~~~~Lkp---gG~l~~~~~~ 156 (279)
T 3ccf_A 123 SNAMLHWVKEP--EAAIASIHQALKS---GGRFVAEFGG 156 (279)
T ss_dssp EESCGGGCSCH--HHHHHHHHHHEEE---EEEEEEEEEC
T ss_pred EcchhhhCcCH--HHHHHHHHHhcCC---CcEEEEEecC
Confidence 99999999876 4789999999999 8999887653
No 58
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.44 E-value=6.3e-13 Score=114.35 Aligned_cols=106 Identities=16% Similarity=0.214 Sum_probs=86.8
Q ss_pred HHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh--cCCCeEEEeccCCC-CCC--CccE
Q 021867 185 VVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES--DLANLKYVGGDMFE-AIP--PADA 258 (306)
Q Consensus 185 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~--~~~rv~~~~~d~~~-~~p--~~D~ 258 (306)
.+...++ .....+|||||||+|.++..+++..+ .+++++|+ +.+++.+++ ...+++++.+|+.+ +.+ .||+
T Consensus 34 ~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 110 (243)
T 3bkw_A 34 ALRAMLP--EVGGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDL 110 (243)
T ss_dssp HHHHHSC--CCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEE
T ss_pred HHHHhcc--ccCCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceE
Confidence 3444444 34578999999999999999998733 38999999 888888887 33579999999987 554 5999
Q ss_pred EEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 259 VLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 259 ~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
|++..++|++++. ..+|++++++|+| ||++++.+.
T Consensus 111 v~~~~~l~~~~~~--~~~l~~~~~~L~p---gG~l~~~~~ 145 (243)
T 3bkw_A 111 AYSSLALHYVEDV--ARLFRTVHQALSP---GGHFVFSTE 145 (243)
T ss_dssp EEEESCGGGCSCH--HHHHHHHHHHEEE---EEEEEEEEE
T ss_pred EEEeccccccchH--HHHHHHHHHhcCc---CcEEEEEeC
Confidence 9999999999864 5889999999999 899998764
No 59
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.43 E-value=1.5e-13 Score=122.94 Aligned_cols=106 Identities=12% Similarity=0.132 Sum_probs=90.2
Q ss_pred hcCCCeEEEecCCccHHHHHHH-HHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCC-CCC-CccEEEehh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIA-KAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFE-AIP-PADAVLLKW 263 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~-~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~-~~p-~~D~~~~~~ 263 (306)
+....+|||||||+|.++..++ ..+|+.+++++|+ +.+++.+++ ..++|+++.+|+.+ +.+ .||+|++..
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~ 195 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNG 195 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECCS
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEECC
Confidence 4567899999999999999996 6789999999999 888888886 24569999999988 444 599999999
Q ss_pred hhccCCchH-HHHHHHHHHHhcCCCCCCcEEEEEeeecCC
Q 021867 264 ILHDWNDEE-CVKILKKCKEAVTSDDKKGKVIIIDMIREN 302 (306)
Q Consensus 264 vlh~~~d~~-~~~iL~~~~~~L~p~~~gg~lli~e~~~~~ 302 (306)
++|++++++ ...+|+++++.|+| ||++++.+...++
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~ 232 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKP---GGALVTSFLTPPP 232 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEE---EEEEEEECCCCCT
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCC---CeEEEEEecCCCC
Confidence 999997654 45689999999999 8999998866543
No 60
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.43 E-value=8.5e-13 Score=116.81 Aligned_cols=111 Identities=19% Similarity=0.225 Sum_probs=92.0
Q ss_pred HHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh----cCCCeEEEeccCCC-CCC-Ccc
Q 021867 185 VVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES----DLANLKYVGGDMFE-AIP-PAD 257 (306)
Q Consensus 185 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~----~~~rv~~~~~d~~~-~~p-~~D 257 (306)
.+++.+. .....+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ..-++++..+|+.+ +.+ .||
T Consensus 111 ~~~~~~~--~~~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD 186 (286)
T 3m70_A 111 DVVDAAK--IISPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENYD 186 (286)
T ss_dssp HHHHHHH--HSCSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCEE
T ss_pred HHHHHhh--ccCCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCcc
Confidence 3444444 346789999999999999999988 558999999 888888776 22289999999988 434 599
Q ss_pred EEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCC
Q 021867 258 AVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIREN 302 (306)
Q Consensus 258 ~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~ 302 (306)
+|++..++|+++++....+|+++++.|+| ||.++|+...-.+
T Consensus 187 ~i~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~ 228 (286)
T 3m70_A 187 FIVSTVVFMFLNRERVPSIIKNMKEHTNV---GGYNLIVAAMSTD 228 (286)
T ss_dssp EEEECSSGGGSCGGGHHHHHHHHHHTEEE---EEEEEEEEEBCCS
T ss_pred EEEEccchhhCCHHHHHHHHHHHHHhcCC---CcEEEEEEecCCC
Confidence 99999999999988888999999999999 8998887765544
No 61
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.43 E-value=5.4e-13 Score=116.34 Aligned_cols=101 Identities=7% Similarity=-0.037 Sum_probs=85.9
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-c---------------------CCCeEEEeccCCC
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-D---------------------LANLKYVGGDMFE 251 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-~---------------------~~rv~~~~~d~~~ 251 (306)
....+|||+|||+|..+..|++. +.+++++|+ +.+++.|++ . ..+|+++.+|+++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 35689999999999999999987 458999999 888888865 2 2689999999998
Q ss_pred -CC---CCccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 252 -AI---PPADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 252 -~~---p~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
+. ..||+|+.+.+||.+++++...++++++++|+| ||+++++....
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~Lkp---GG~l~l~~~~~ 194 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRK---EFQYLVAVLSY 194 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEE---EEEEEEEEEEC
T ss_pred CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCC---CeEEEEEEEec
Confidence 43 359999999999999988778899999999999 89997665543
No 62
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.43 E-value=1.8e-13 Score=111.50 Aligned_cols=101 Identities=23% Similarity=0.353 Sum_probs=87.1
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhcCCCeEEEeccCCCCCC--CccEEEehhhhccCCc
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESDLANLKYVGGDMFEAIP--PADAVLLKWILHDWND 270 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~~~p--~~D~~~~~~vlh~~~d 270 (306)
..+..+|||||||+|.++..+++.+. +++++|+ +.+++.+++..+++++..+| .+.+ .||+|++..++|++++
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~v~~~~~d--~~~~~~~~D~v~~~~~l~~~~~ 90 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEKFDSVITLSDP--KEIPDNSVDFILFANSFHDMDD 90 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHHCTTSEEESSG--GGSCTTCEEEEEEESCSTTCSC
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHhCCCcEEEeCC--CCCCCCceEEEEEccchhcccC
Confidence 45678999999999999999999884 8999999 88888888667799999999 4333 5999999999999987
Q ss_pred hHHHHHHHHHHHhcCCCCCCcEEEEEeeecCCC
Q 021867 271 EECVKILKKCKEAVTSDDKKGKVIIIDMIRENK 303 (306)
Q Consensus 271 ~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~~ 303 (306)
. ..+|+++++.|+| ||++++.+....+.
T Consensus 91 ~--~~~l~~~~~~L~p---gG~l~~~~~~~~~~ 118 (170)
T 3i9f_A 91 K--QHVISEVKRILKD---DGRVIIIDWRKENT 118 (170)
T ss_dssp H--HHHHHHHHHHEEE---EEEEEEEEECSSCC
T ss_pred H--HHHHHHHHHhcCC---CCEEEEEEcCcccc
Confidence 5 5789999999999 99999998876543
No 63
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.43 E-value=4.7e-13 Score=115.25 Aligned_cols=98 Identities=15% Similarity=0.269 Sum_probs=84.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-cCCCeEEEeccCCCCCC--CccEEEehhhhccCCc
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-DLANLKYVGGDMFEAIP--PADAVLLKWILHDWND 270 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-~~~rv~~~~~d~~~~~p--~~D~~~~~~vlh~~~d 270 (306)
....+|||||||+|.++..+++.++ +++++|+ +.+++.|++ ...+++++.+|+.+..+ .||+|++.++||++++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~ 118 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPRRYDNIVLTHVLEHIDD 118 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCSSCEEEEEEESCGGGCSS
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcCcCCcccEEEEhhHHHhhcC
Confidence 3567899999999999999999876 6889999 888888887 33389999999987433 5999999999999988
Q ss_pred hHHHHHHHHHH-HhcCCCCCCcEEEEEeee
Q 021867 271 EECVKILKKCK-EAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 271 ~~~~~iL~~~~-~~L~p~~~gg~lli~e~~ 299 (306)
. ..+|++++ ++|+| ||+++|.++.
T Consensus 119 ~--~~~l~~~~~~~Lkp---gG~l~i~~~~ 143 (250)
T 2p7i_A 119 P--VALLKRINDDWLAE---GGRLFLVCPN 143 (250)
T ss_dssp H--HHHHHHHHHTTEEE---EEEEEEEEEC
T ss_pred H--HHHHHHHHHHhcCC---CCEEEEEcCC
Confidence 6 47899999 99999 8999998754
No 64
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.42 E-value=5.2e-13 Score=122.68 Aligned_cols=113 Identities=16% Similarity=0.164 Sum_probs=91.2
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-------------c-CCCeEEEecc
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-------------D-LANLKYVGGD 248 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-------------~-~~rv~~~~~d 248 (306)
..+++.+. .....+|||||||+|.++..++..++..+++++|+ +.+++.|++ . .++|+|+.+|
T Consensus 163 ~~il~~l~--l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD 240 (438)
T 3uwp_A 163 AQMIDEIK--MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGD 240 (438)
T ss_dssp HHHHHHHC--CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECC
T ss_pred HHHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECc
Confidence 34455444 56778999999999999999999888777999999 667776653 1 3789999999
Q ss_pred CCC-CC----CCccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCCCC
Q 021867 249 MFE-AI----PPADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENKK 304 (306)
Q Consensus 249 ~~~-~~----p~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~~~ 304 (306)
+++ ++ ..+|+|++..+++ ++ +....|+++++.|+| ||+|++.|.+.+++.
T Consensus 241 ~~~lp~~d~~~~aDVVf~Nn~~F-~p--dl~~aL~Ei~RvLKP---GGrIVssE~f~p~d~ 295 (438)
T 3uwp_A 241 FLSEEWRERIANTSVIFVNNFAF-GP--EVDHQLKERFANMKE---GGRIVSSKPFAPLNF 295 (438)
T ss_dssp TTSHHHHHHHHTCSEEEECCTTC-CH--HHHHHHHHHHTTSCT---TCEEEESSCSSCTTC
T ss_pred ccCCccccccCCccEEEEccccc-Cc--hHHHHHHHHHHcCCC---CcEEEEeecccCCCC
Confidence 998 54 3699999987764 33 346778999999999 999999999998764
No 65
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.42 E-value=7.7e-13 Score=112.02 Aligned_cols=100 Identities=11% Similarity=0.212 Sum_probs=85.0
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh---cCCCeEEEeccCCCCCC--CccEEEehhhhcc
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES---DLANLKYVGGDMFEAIP--PADAVLLKWILHD 267 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~---~~~rv~~~~~d~~~~~p--~~D~~~~~~vlh~ 267 (306)
.....+|||||||+|.++..+++.. .+++++|+ +.+++.+++ ..++++++.+|+.+..+ .||+|++..++|+
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~ 126 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVVAEVLYY 126 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEEEEESCGGG
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEEEEccHHHh
Confidence 3456899999999999999999885 48999999 888888887 34589999999998323 5999999999999
Q ss_pred CCc-hHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 268 WND-EECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 268 ~~d-~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
+++ +...++|+++++.|+| ||++++...
T Consensus 127 ~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~ 155 (216)
T 3ofk_A 127 LEDMTQMRTAIDNMVKMLAP---GGHLVFGSA 155 (216)
T ss_dssp SSSHHHHHHHHHHHHHTEEE---EEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHcCC---CCEEEEEec
Confidence 997 4556889999999999 899888654
No 66
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.42 E-value=8.8e-13 Score=113.47 Aligned_cols=99 Identities=16% Similarity=0.247 Sum_probs=86.0
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh--cCCCeEEEeccCCC-CCC--CccEEEehhhhcc
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES--DLANLKYVGGDMFE-AIP--PADAVLLKWILHD 267 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~--~~~rv~~~~~d~~~-~~p--~~D~~~~~~vlh~ 267 (306)
.....+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ...+++++.+|+.+ +.+ .||+|++.+++|+
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 128 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEW 128 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTS
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhh
Confidence 346789999999999999999988 568999999 888888886 46789999999998 554 5999999999999
Q ss_pred CCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 268 WNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 268 ~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
+++. ..+|+++++.|+| ||+++|.+..
T Consensus 129 ~~~~--~~~l~~~~~~L~p---gG~l~i~~~~ 155 (242)
T 3l8d_A 129 TEEP--LRALNEIKRVLKS---DGYACIAILG 155 (242)
T ss_dssp SSCH--HHHHHHHHHHEEE---EEEEEEEEEC
T ss_pred ccCH--HHHHHHHHHHhCC---CeEEEEEEcC
Confidence 9876 4789999999999 8999998754
No 67
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.41 E-value=1e-12 Score=108.74 Aligned_cols=99 Identities=18% Similarity=0.268 Sum_probs=86.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhcCCCeEEEeccCCC-CCC--CccEEEeh-hhhccCC
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESDLANLKYVGGDMFE-AIP--PADAVLLK-WILHDWN 269 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~-~~p--~~D~~~~~-~vlh~~~ 269 (306)
....+|||||||+|.++..+++. +.+++++|. +.+++.+++...+++++.+|+.+ +.+ .+|+|++. .++|+++
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~ 122 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLA 122 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSC
T ss_pred cCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcC
Confidence 56789999999999999999987 568999999 88888888756679999999988 554 59999998 8999988
Q ss_pred chHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 270 DEECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 270 d~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
+++...+|+++++.|+| ||++++...
T Consensus 123 ~~~~~~~l~~~~~~l~~---~G~l~~~~~ 148 (195)
T 3cgg_A 123 EDGREPALANIHRALGA---DGRAVIGFG 148 (195)
T ss_dssp HHHHHHHHHHHHHHEEE---EEEEEEEEE
T ss_pred hHHHHHHHHHHHHHhCC---CCEEEEEeC
Confidence 88788999999999999 888888654
No 68
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.41 E-value=8.3e-13 Score=111.06 Aligned_cols=105 Identities=11% Similarity=0.127 Sum_probs=87.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh----cCCCeEEEeccCCC-CCC--CccEEEehhhhc
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES----DLANLKYVGGDMFE-AIP--PADAVLLKWILH 266 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~----~~~rv~~~~~d~~~-~~p--~~D~~~~~~vlh 266 (306)
....+|||+|||+|.++..++.. ++.+++++|. +.+++.+++ ...++++..+|+.+ +.+ .||+|++..++|
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 100 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIF 100 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGG
T ss_pred CCCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHH
Confidence 45689999999999985554443 5679999999 888888776 34689999999988 554 499999999999
Q ss_pred cCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCCC
Q 021867 267 DWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENK 303 (306)
Q Consensus 267 ~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~~ 303 (306)
+++.++...+|++++++|+| ||++++.+...++.
T Consensus 101 ~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~ 134 (209)
T 2p8j_A 101 HMRKNDVKEAIDEIKRVLKP---GGLACINFLTTKDE 134 (209)
T ss_dssp GSCHHHHHHHHHHHHHHEEE---EEEEEEEEEETTST
T ss_pred hCCHHHHHHHHHHHHHHcCC---CcEEEEEEecccch
Confidence 99877788999999999999 89999988876543
No 69
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.40 E-value=1.8e-12 Score=113.26 Aligned_cols=106 Identities=15% Similarity=0.274 Sum_probs=88.2
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhcCCCeEEEeccCCC-CCC--CccEE
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESDLANLKYVGGDMFE-AIP--PADAV 259 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~-~~p--~~D~~ 259 (306)
..+++.++ .....+|||||||+|.++..+++ |..+++++|+ +.+++.+++. .+++++.+|+.+ +.+ .||+|
T Consensus 24 ~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~d~~~~~~~~~~fD~v 98 (261)
T 3ege_A 24 NAIINLLN--LPKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVH-PQVEWFTGYAENLALPDKSVDGV 98 (261)
T ss_dssp HHHHHHHC--CCTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCC-TTEEEECCCTTSCCSCTTCBSEE
T ss_pred HHHHHHhC--CCCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhc-cCCEEEECchhhCCCCCCCEeEE
Confidence 34444444 45678999999999999999997 6789999999 8888888753 399999999988 655 59999
Q ss_pred EehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 260 LLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 260 ~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
++.+++|++++. ..+|++++++|+ ||++++++...
T Consensus 99 ~~~~~l~~~~~~--~~~l~~~~~~Lk----gG~~~~~~~~~ 133 (261)
T 3ege_A 99 ISILAIHHFSHL--EKSFQEMQRIIR----DGTIVLLTFDI 133 (261)
T ss_dssp EEESCGGGCSSH--HHHHHHHHHHBC----SSCEEEEEECG
T ss_pred EEcchHhhccCH--HHHHHHHHHHhC----CcEEEEEEcCC
Confidence 999999999775 578999999999 38999988754
No 70
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.39 E-value=1.9e-12 Score=110.57 Aligned_cols=102 Identities=14% Similarity=0.252 Sum_probs=86.5
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-c---------CCCeEEEeccCCC-CCC--CccEE
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-D---------LANLKYVGGDMFE-AIP--PADAV 259 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-~---------~~rv~~~~~d~~~-~~p--~~D~~ 259 (306)
+....+|||||||+|.++..+++. ..+++++|+ +.+++.+++ . .+++++..+|+.+ +.+ .||+|
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 105 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFA 105 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEE
Confidence 346789999999999999999988 568999999 888888876 1 2368999999988 554 59999
Q ss_pred EehhhhccCCch-HHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 260 LLKWILHDWNDE-ECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 260 ~~~~vlh~~~d~-~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
++..++|++++. ....+|++++++|+| ||++++.+...
T Consensus 106 ~~~~~l~~~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~ 144 (235)
T 3sm3_A 106 VMQAFLTSVPDPKERSRIIKEVFRVLKP---GAYLYLVEFGQ 144 (235)
T ss_dssp EEESCGGGCCCHHHHHHHHHHHHHHEEE---EEEEEEEEEBC
T ss_pred EEcchhhcCCCHHHHHHHHHHHHHHcCC---CeEEEEEECCc
Confidence 999999999864 356899999999999 99999998754
No 71
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.39 E-value=1.1e-12 Score=116.84 Aligned_cols=109 Identities=15% Similarity=0.268 Sum_probs=87.8
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh----cC----CCeEEEeccCCC-CC
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES----DL----ANLKYVGGDMFE-AI 253 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~----~~----~rv~~~~~d~~~-~~ 253 (306)
..+++.+. ....+|||||||+|.++..+++. ..+++++|+ +.+++.|++ .. .+|+++.+|+.+ +.
T Consensus 73 ~~~~~~~~---~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 147 (299)
T 3g2m_A 73 REFATRTG---PVSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL 147 (299)
T ss_dssp HHHHHHHC---CCCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC
T ss_pred HHHHHhhC---CCCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc
Confidence 44444443 34459999999999999999988 468999999 888988886 12 789999999998 55
Q ss_pred C-CccEEEe-hhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 254 P-PADAVLL-KWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 254 p-~~D~~~~-~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
+ .||+|++ ..++|++++++...+|++++++|+| ||+|+|.....
T Consensus 148 ~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~ 193 (299)
T 3g2m_A 148 DKRFGTVVISSGSINELDEADRRGLYASVREHLEP---GGKFLLSLAMS 193 (299)
T ss_dssp SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEE---EEEEEEEEECC
T ss_pred CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCC---CcEEEEEeecC
Confidence 5 5998885 5778888877788999999999999 89888876543
No 72
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.39 E-value=2.1e-12 Score=113.35 Aligned_cols=112 Identities=13% Similarity=0.133 Sum_probs=89.0
Q ss_pred HHHhhchhhhcCCCeEEEecCCccHHHHHHHHHC-CCCeEEEecchH-------HHHhchh------cCCCeEEEecc-C
Q 021867 185 VVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAF-PNLECTDFDLPH-------VVNGLES------DLANLKYVGGD-M 249 (306)
Q Consensus 185 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl~~-------~~~~a~~------~~~rv~~~~~d-~ 249 (306)
.+++.+. .....+|||||||+|.++..+++++ |+.+++++|+.+ +++.+++ ..++|+++.+| +
T Consensus 34 ~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 111 (275)
T 3bkx_A 34 AIAEAWQ--VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNL 111 (275)
T ss_dssp HHHHHHT--CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCT
T ss_pred HHHHHcC--CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChh
Confidence 4455544 5667899999999999999999996 878999999943 7787776 23689999998 5
Q ss_pred CC---CCC--CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCCC
Q 021867 250 FE---AIP--PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENK 303 (306)
Q Consensus 250 ~~---~~p--~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~~ 303 (306)
.. +++ .||+|++..++|++++.. .+++.++..++| ||++++.+...+..
T Consensus 112 ~~~~~~~~~~~fD~v~~~~~l~~~~~~~--~~~~~~~~l~~~---gG~l~~~~~~~~~~ 165 (275)
T 3bkx_A 112 SDDLGPIADQHFDRVVLAHSLWYFASAN--ALALLFKNMAAV---CDHVDVAEWSMQPT 165 (275)
T ss_dssp TTCCGGGTTCCCSEEEEESCGGGSSCHH--HHHHHHHHHTTT---CSEEEEEEECSSCS
T ss_pred hhccCCCCCCCEEEEEEccchhhCCCHH--HHHHHHHHHhCC---CCEEEEEEecCCCC
Confidence 43 333 499999999999999875 367777777777 89999999877644
No 73
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.39 E-value=1.1e-12 Score=116.14 Aligned_cols=98 Identities=18% Similarity=0.250 Sum_probs=84.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCC-C-CC--CccEEEehh
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFE-A-IP--PADAVLLKW 263 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~-~-~p--~~D~~~~~~ 263 (306)
.+..+|||||||+|.++..+++. ..+++++|+ +.+++.|++ ..++++++.+|+.+ + .+ .||+|++..
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 144 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHA 144 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEES
T ss_pred CCCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECc
Confidence 34679999999999999999988 668999999 888888886 23789999999987 3 33 599999999
Q ss_pred hhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 264 ILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 264 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
++|++++. ..+|+++++.|+| ||+++|.+..
T Consensus 145 ~l~~~~~~--~~~l~~~~~~Lkp---gG~l~~~~~~ 175 (285)
T 4htf_A 145 VLEWVADP--RSVLQTLWSVLRP---GGVLSLMFYN 175 (285)
T ss_dssp CGGGCSCH--HHHHHHHHHTEEE---EEEEEEEEEB
T ss_pred hhhcccCH--HHHHHHHHHHcCC---CeEEEEEEeC
Confidence 99999886 5789999999999 8999988753
No 74
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.38 E-value=6.2e-12 Score=105.65 Aligned_cols=105 Identities=17% Similarity=0.242 Sum_probs=87.5
Q ss_pred HHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCCCC---CC
Q 021867 185 VVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFEAI---PP 255 (306)
Q Consensus 185 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~~~---p~ 255 (306)
.++..+. .....+|||||||+|.++..+++.+|..+++++|+ +.+++.+++ ..++++++.+|+.+.. +.
T Consensus 31 ~~l~~l~--~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 108 (204)
T 3e05_A 31 VTLSKLR--LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPD 108 (204)
T ss_dssp HHHHHTT--CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCC
T ss_pred HHHHHcC--CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCC
Confidence 3445454 56678999999999999999999999999999999 888888876 3478999999997732 46
Q ss_pred ccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 256 ADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 256 ~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
+|++++...++ ....+++++++.|+| ||++++....
T Consensus 109 ~D~i~~~~~~~-----~~~~~l~~~~~~Lkp---gG~l~~~~~~ 144 (204)
T 3e05_A 109 PDRVFIGGSGG-----MLEEIIDAVDRRLKS---EGVIVLNAVT 144 (204)
T ss_dssp CSEEEESCCTT-----CHHHHHHHHHHHCCT---TCEEEEEECB
T ss_pred CCEEEECCCCc-----CHHHHHHHHHHhcCC---CeEEEEEecc
Confidence 99999998876 235789999999999 8999987654
No 75
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.38 E-value=2.9e-12 Score=111.55 Aligned_cols=96 Identities=15% Similarity=0.203 Sum_probs=83.3
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh----cCCCeEEEeccCCC-CCC--CccEEEehhhh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES----DLANLKYVGGDMFE-AIP--PADAVLLKWIL 265 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~----~~~rv~~~~~d~~~-~~p--~~D~~~~~~vl 265 (306)
.....+|||||||+|.++..+++. ..+++++|+ +.+++.+++ ..++++++.+|+.+ +.+ .||+|++..++
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 114 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLW 114 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCG
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCch
Confidence 456789999999999999999987 568999999 888888876 25789999999987 554 49999999999
Q ss_pred ccCCchHHHHHHHHHHHhcCCCCCCcEEEEE
Q 021867 266 HDWNDEECVKILKKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 266 h~~~d~~~~~iL~~~~~~L~p~~~gg~lli~ 296 (306)
|++++. ..+|++++++|+| ||++++.
T Consensus 115 ~~~~~~--~~~l~~~~~~L~p---gG~l~~~ 140 (263)
T 2yqz_A 115 HLVPDW--PKVLAEAIRVLKP---GGALLEG 140 (263)
T ss_dssp GGCTTH--HHHHHHHHHHEEE---EEEEEEE
T ss_pred hhcCCH--HHHHHHHHHHCCC---CcEEEEE
Confidence 999875 5789999999999 8999887
No 76
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.38 E-value=1.9e-12 Score=119.59 Aligned_cols=103 Identities=14% Similarity=0.245 Sum_probs=89.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHC-CCCeEEEecc-hHHHHhchhc---------C----CCeEEEeccCCC-------C
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAF-PNLECTDFDL-PHVVNGLESD---------L----ANLKYVGGDMFE-------A 252 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-~~~~~~a~~~---------~----~rv~~~~~d~~~-------~ 252 (306)
....+|||||||+|.++..+++.+ |..+++++|+ +.+++.|++. . ++|+|+.+|+.+ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 456899999999999999999987 7889999999 8888888861 2 699999999987 4
Q ss_pred CC--CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCC
Q 021867 253 IP--PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIREN 302 (306)
Q Consensus 253 ~p--~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~ 302 (306)
++ .||+|++..++|++++. ..+|++++++|+| ||++++.+...+.
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d~--~~~l~~~~r~Lkp---gG~l~i~~~~~~~ 208 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTNK--LALFKEIHRVLRD---GGELYFSDVYADR 208 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSCH--HHHHHHHHHHEEE---EEEEEEEEEEESS
T ss_pred CCCCCEEEEEEccchhcCCCH--HHHHHHHHHHcCC---CCEEEEEEecccc
Confidence 44 49999999999999885 5889999999999 9999999876553
No 77
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.37 E-value=1.6e-12 Score=109.77 Aligned_cols=100 Identities=18% Similarity=0.131 Sum_probs=85.0
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhcCCCeEEEeccCCC-CCC-CccEEEehhhhccCCc
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESDLANLKYVGGDMFE-AIP-PADAVLLKWILHDWND 270 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~-~~p-~~D~~~~~~vlh~~~d 270 (306)
+....+|||||||+|.++..+++. ..+++++|+ +.+++.+++.. ++++..+|+.+ +.+ .||+|++..++|++++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~-~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~ 117 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRL-GRPVRTMLFHQLDAIDAYDAVWAHACLLHVPR 117 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH-TSCCEECCGGGCCCCSCEEEEEECSCGGGSCH
T ss_pred cCCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhc-CCceEEeeeccCCCCCcEEEEEecCchhhcCH
Confidence 345679999999999999999987 568999999 88888888522 68888999887 422 5999999999999998
Q ss_pred hHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 271 EECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 271 ~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
++...+|+++++.|+| ||++++....
T Consensus 118 ~~~~~~l~~~~~~Lkp---gG~l~~~~~~ 143 (211)
T 3e23_A 118 DELADVLKLIWRALKP---GGLFYASYKS 143 (211)
T ss_dssp HHHHHHHHHHHHHEEE---EEEEEEEEEC
T ss_pred HHHHHHHHHHHHhcCC---CcEEEEEEcC
Confidence 8888999999999999 8999887543
No 78
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.37 E-value=9.3e-13 Score=116.83 Aligned_cols=108 Identities=16% Similarity=0.132 Sum_probs=87.8
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh---------cCCCeEEEeccCCC-C
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES---------DLANLKYVGGDMFE-A 252 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~---------~~~rv~~~~~d~~~-~ 252 (306)
..+.+.+. ..+..+|||||||+|.++..+++.. .+++++|+ +.+++.|++ ...++.+..+|+.+ +
T Consensus 47 ~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~ 122 (293)
T 3thr_A 47 AWLLGLLR--QHGCHRVLDVACGTGVDSIMLVEEG--FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLD 122 (293)
T ss_dssp HHHHHHHH--HTTCCEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHH
T ss_pred HHHHHHhc--ccCCCEEEEecCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCc
Confidence 33344443 3467899999999999999999984 48999999 888888864 23678899999887 4
Q ss_pred ---CC--CccEEEeh-hhhccCCc-----hHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 253 ---IP--PADAVLLK-WILHDWND-----EECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 253 ---~p--~~D~~~~~-~vlh~~~d-----~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
.+ .||+|++. +++|++++ ++...+|++++++|+| ||++++...
T Consensus 123 ~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~ 176 (293)
T 3thr_A 123 KDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRP---GGLLVIDHR 176 (293)
T ss_dssp HHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEE---EEEEEEEEE
T ss_pred cccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCC---CeEEEEEeC
Confidence 34 59999998 99999988 6778999999999999 899888654
No 79
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.36 E-value=2.3e-12 Score=105.51 Aligned_cols=97 Identities=15% Similarity=0.201 Sum_probs=80.9
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCCCC----CCccEEEeh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFEAI----PPADAVLLK 262 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~~~----p~~D~~~~~ 262 (306)
.....+|||||||+|.++..+++.+|..+++++|+ +.+++.+++ ..+++ ++.+|..+++ ..||+|++.
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~ 101 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIG 101 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEEC
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEEC
Confidence 45667999999999999999999999999999999 778888876 23488 8889887632 359999999
Q ss_pred hhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 263 WILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 263 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
.++|+ ..+++++++.|+| ||++++.+...
T Consensus 102 ~~~~~------~~~l~~~~~~L~~---gG~l~~~~~~~ 130 (178)
T 3hm2_A 102 GGLTA------PGVFAAAWKRLPV---GGRLVANAVTV 130 (178)
T ss_dssp C-TTC------TTHHHHHHHTCCT---TCEEEEEECSH
T ss_pred CcccH------HHHHHHHHHhcCC---CCEEEEEeecc
Confidence 99986 3679999999999 89999877543
No 80
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.36 E-value=7.6e-12 Score=108.38 Aligned_cols=96 Identities=22% Similarity=0.365 Sum_probs=80.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh----cCCCeEEEeccCCC-CCC-CccEEEeh-hhhc
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES----DLANLKYVGGDMFE-AIP-PADAVLLK-WILH 266 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~----~~~rv~~~~~d~~~-~~p-~~D~~~~~-~vlh 266 (306)
....+|||||||+|.++..+++. +.+++++|+ +.+++.+++ ...+++++.+|+.+ +.+ .+|+|++. ..+|
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~ 117 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFDAVTMFFSTIM 117 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCEEEEEECSSGGG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCccEEEEcCCchh
Confidence 45679999999999999999986 568999999 888888876 34479999999987 444 59999986 4567
Q ss_pred cCCchHHHHHHHHHHHhcCCCCCCcEEEE
Q 021867 267 DWNDEECVKILKKCKEAVTSDDKKGKVII 295 (306)
Q Consensus 267 ~~~d~~~~~iL~~~~~~L~p~~~gg~lli 295 (306)
+++.++...+|+++++.|+| ||++++
T Consensus 118 ~~~~~~~~~~l~~~~~~L~p---gG~li~ 143 (252)
T 1wzn_A 118 YFDEEDLRKLFSKVAEALKP---GGVFIT 143 (252)
T ss_dssp GSCHHHHHHHHHHHHHHEEE---EEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCC---CeEEEE
Confidence 77777788999999999999 788765
No 81
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.36 E-value=2.4e-12 Score=108.42 Aligned_cols=102 Identities=17% Similarity=0.212 Sum_probs=85.9
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh---cCCCeEEEeccCCC-CCC--CccEEEehhhhcc
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES---DLANLKYVGGDMFE-AIP--PADAVLLKWILHD 267 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~---~~~rv~~~~~d~~~-~~p--~~D~~~~~~vlh~ 267 (306)
....+|||||||+|.++..+++..+. +++++|+ +.+++.+++ ..+++++..+|+.+ +.+ .||+|++..++|.
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDA 119 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhh
Confidence 55679999999999999999998765 8999999 888888876 23689999999988 554 5999999988876
Q ss_pred CC-------------chHHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 268 WN-------------DEECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 268 ~~-------------d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
.. .+....+|++++++|+| ||++++.+...
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~li~~~~~~ 162 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVP---GGRFISMTSAA 162 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEE---EEEEEEEESCC
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcC---CCEEEEEeCCC
Confidence 54 34567899999999999 89999988654
No 82
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.35 E-value=1.6e-12 Score=114.61 Aligned_cols=97 Identities=15% Similarity=0.272 Sum_probs=82.4
Q ss_pred CCCeEEEecCCccH----HHHHHHHHCC----CCeEEEecc-hHHHHhchhc----------------------C-----
Q 021867 196 GLNSLVDVGGGIGT----VAKAIAKAFP----NLECTDFDL-PHVVNGLESD----------------------L----- 239 (306)
Q Consensus 196 ~~~~vlDvGgG~G~----~~~~l~~~~p----~~~~~~~Dl-~~~~~~a~~~----------------------~----- 239 (306)
+..+|+|+|||+|. +++.|++.+| +.++++.|+ +.+++.|++. .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35789999999998 6667777755 468999999 8999998761 0
Q ss_pred ---------CCeEEEeccCCC-CCC---CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEE
Q 021867 240 ---------ANLKYVGGDMFE-AIP---PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVII 295 (306)
Q Consensus 240 ---------~rv~~~~~d~~~-~~p---~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli 295 (306)
++|+|..+|+.+ +++ .+|+|+++++|++++++...+++++++++|+| ||.|++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~p---gG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKP---DGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEE---EEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCC---CcEEEE
Confidence 369999999998 454 59999999999999998888999999999999 888877
No 83
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.35 E-value=4.6e-12 Score=108.92 Aligned_cols=95 Identities=15% Similarity=0.175 Sum_probs=81.2
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh----cCCCeEEEeccCCC-CCC-CccEEEehh-hhcc
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES----DLANLKYVGGDMFE-AIP-PADAVLLKW-ILHD 267 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~----~~~rv~~~~~d~~~-~~p-~~D~~~~~~-vlh~ 267 (306)
...+|||||||+|.++..+++. ..+++++|+ +.+++.+++ ...+++++.+|+.+ +.+ .||+|++.. ++|+
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~ 114 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITCCLDSTNY 114 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEEEECTTGGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCCceEEEEcCccccc
Confidence 5689999999999999999988 458999999 888888876 22389999999987 454 599999998 9999
Q ss_pred CCc-hHHHHHHHHHHHhcCCCCCCcEEEE
Q 021867 268 WND-EECVKILKKCKEAVTSDDKKGKVII 295 (306)
Q Consensus 268 ~~d-~~~~~iL~~~~~~L~p~~~gg~lli 295 (306)
+++ ++...+|++++++|+| ||++++
T Consensus 115 ~~~~~~~~~~l~~~~~~L~p---gG~l~~ 140 (246)
T 1y8c_A 115 IIDSDDLKKYFKAVSNHLKE---GGVFIF 140 (246)
T ss_dssp CCSHHHHHHHHHHHHTTEEE---EEEEEE
T ss_pred cCCHHHHHHHHHHHHHhcCC---CcEEEE
Confidence 854 6678899999999999 888876
No 84
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.32 E-value=9.4e-12 Score=110.25 Aligned_cols=101 Identities=15% Similarity=0.123 Sum_probs=85.3
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCC-CC-C--CccEEEehh
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFE-AI-P--PADAVLLKW 263 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~-~~-p--~~D~~~~~~ 263 (306)
....+|||||||+|.++..+++. +..+++++|+ +.+++.|++ ...+++++.+|+.+ +. + .||+|++..
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 56789999999999999998876 5568999999 888888876 22579999999988 55 3 499999999
Q ss_pred hhcc--CCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 264 ILHD--WNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 264 vlh~--~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
++|+ .+.++...+|+++++.|+| ||++++....
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~ 176 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRP---GGYFIMTVPS 176 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEE---EEEEEEEEEC
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCC---CCEEEEEECC
Confidence 9998 5667778999999999999 8999987654
No 85
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.30 E-value=9e-12 Score=105.00 Aligned_cols=94 Identities=17% Similarity=0.176 Sum_probs=81.5
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCC-eEEEecc-hHHHHhchhcCCCeEEEeccCCC-CCC--CccEEEehhhhccCCc
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFPNL-ECTDFDL-PHVVNGLESDLANLKYVGGDMFE-AIP--PADAVLLKWILHDWND 270 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p~~-~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~-~~p--~~D~~~~~~vlh~~~d 270 (306)
...+|||||||+|.++..+ .. +++++|. +.+++.+++...+++++.+|+.+ +.+ .+|+|++..++|++++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 110 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVED 110 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSC
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcCC
Confidence 6789999999999998887 44 8999999 88888888744789999999987 554 4999999999999987
Q ss_pred hHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 271 EECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 271 ~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
. .++|+++++.|+| ||++++.+..
T Consensus 111 ~--~~~l~~~~~~L~p---gG~l~i~~~~ 134 (211)
T 2gs9_A 111 V--ERVLLEARRVLRP---GGALVVGVLE 134 (211)
T ss_dssp H--HHHHHHHHHHEEE---EEEEEEEEEC
T ss_pred H--HHHHHHHHHHcCC---CCEEEEEecC
Confidence 5 5789999999999 8999998764
No 86
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.30 E-value=6.8e-12 Score=111.50 Aligned_cols=98 Identities=17% Similarity=0.249 Sum_probs=75.3
Q ss_pred CCCeEEEecCCccHHHH----HHHHHCCCCeE--EEecc-hHHHHhchh------cCCCeEE--EeccCCC-C------C
Q 021867 196 GLNSLVDVGGGIGTVAK----AIAKAFPNLEC--TDFDL-PHVVNGLES------DLANLKY--VGGDMFE-A------I 253 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~----~l~~~~p~~~~--~~~Dl-~~~~~~a~~------~~~rv~~--~~~d~~~-~------~ 253 (306)
...+|||||||+|.++. .++.++|+.++ +++|. +.+++.|++ ..+++++ ..++..+ + .
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 45699999999997554 55667788854 99998 888888776 1235554 4444432 1 2
Q ss_pred C--CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 254 P--PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 254 p--~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
+ .||+|+++++||+++|.. +.|+++++.|+| ||+++|.+.
T Consensus 132 ~~~~fD~V~~~~~l~~~~d~~--~~l~~~~r~Lkp---gG~l~i~~~ 173 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYVKDIP--ATLKFFHSLLGT---NAKMLIIVV 173 (292)
T ss_dssp CCCCEEEEEEESCGGGCSCHH--HHHHHHHHTEEE---EEEEEEEEE
T ss_pred CCCceeEEEEeeeeeecCCHH--HHHHHHHHHcCC---CcEEEEEEe
Confidence 2 499999999999999864 689999999999 999999864
No 87
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.30 E-value=1.4e-11 Score=121.39 Aligned_cols=100 Identities=14% Similarity=0.204 Sum_probs=86.4
Q ss_pred cCCCeEEEecCCccHHHHHHHHHC-CCCeEEEecc-hHHHHhchh-----------cCCCeEEEeccCCC-CCC--CccE
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAF-PNLECTDFDL-PHVVNGLES-----------DLANLKYVGGDMFE-AIP--PADA 258 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-~~~~~~a~~-----------~~~rv~~~~~d~~~-~~p--~~D~ 258 (306)
.+..+|||||||+|.++..|++.. |..+++++|+ +.+++.|++ ...+|+|+.+|+.+ +.+ .||+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 467899999999999999999998 5679999999 888888865 23689999999988 544 5999
Q ss_pred EEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 259 VLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 259 ~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
|++..++|+++++....+++++++.|+| | .++|..+
T Consensus 800 VV~~eVLeHL~dp~l~~~L~eI~RvLKP---G-~LIISTP 835 (950)
T 3htx_A 800 GTCLEVIEHMEEDQACEFGEKVLSLFHP---K-LLIVSTP 835 (950)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTTCC---S-EEEEEEC
T ss_pred EEEeCchhhCChHHHHHHHHHHHHHcCC---C-EEEEEec
Confidence 9999999999998888899999999999 6 6666543
No 88
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.30 E-value=8.8e-12 Score=107.14 Aligned_cols=95 Identities=23% Similarity=0.375 Sum_probs=80.6
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh----cCCCeEEEeccCCC-CCC-CccEEEehh-hhc
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES----DLANLKYVGGDMFE-AIP-PADAVLLKW-ILH 266 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~----~~~rv~~~~~d~~~-~~p-~~D~~~~~~-vlh 266 (306)
....+|||||||+|.++..+++. .+++++|+ +.+++.+++ ...+++++.+|+.+ +.+ .+|+|++.. ++|
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~~~ 108 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVDAITILCDSLN 108 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEEEEEECTTGGG
T ss_pred CCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcCEEEEeCCchh
Confidence 34589999999999999999887 68999999 888888876 34689999999987 454 599999986 998
Q ss_pred cC-CchHHHHHHHHHHHhcCCCCCCcEEEE
Q 021867 267 DW-NDEECVKILKKCKEAVTSDDKKGKVII 295 (306)
Q Consensus 267 ~~-~d~~~~~iL~~~~~~L~p~~~gg~lli 295 (306)
++ +.++...+|++++++|+| ||++++
T Consensus 109 ~~~~~~~~~~~l~~~~~~L~p---gG~l~~ 135 (243)
T 3d2l_A 109 YLQTEADVKQTFDSAARLLTD---GGKLLF 135 (243)
T ss_dssp GCCSHHHHHHHHHHHHHHEEE---EEEEEE
T ss_pred hcCCHHHHHHHHHHHHHhcCC---CeEEEE
Confidence 87 456678899999999999 888876
No 89
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.30 E-value=1.1e-11 Score=109.73 Aligned_cols=97 Identities=11% Similarity=0.177 Sum_probs=80.9
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCC-CCCCccEEEehhhhc
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFE-AIPPADAVLLKWILH 266 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~-~~p~~D~~~~~~vlh 266 (306)
...+.+|||||||+|.++..++.+.++.+++++|+ |.+++.|++ ..++|+|+.+|+.+ +...||+|++...
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~~~a~-- 197 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLMVAAL-- 197 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEEECTT--
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEEECCC--
Confidence 56789999999999988877777788999999999 999999887 23899999999988 4336999998654
Q ss_pred cCCchHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 267 DWNDEECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 267 ~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
.++ ..++++++++.|+| ||+|++.+.
T Consensus 198 -~~d--~~~~l~el~r~LkP---GG~Lvv~~~ 223 (298)
T 3fpf_A 198 -AEP--KRRVFRNIHRYVDT---ETRIIYRTY 223 (298)
T ss_dssp -CSC--HHHHHHHHHHHCCT---TCEEEEEEC
T ss_pred -ccC--HHHHHHHHHHHcCC---CcEEEEEcC
Confidence 233 35889999999999 999998763
No 90
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.29 E-value=1.6e-11 Score=107.36 Aligned_cols=106 Identities=14% Similarity=0.067 Sum_probs=81.1
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-cCC-CeEEEeccCCC----C-CCC
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-DLA-NLKYVGGDMFE----A-IPP 255 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-~~~-rv~~~~~d~~~----~-~p~ 255 (306)
..+++.+. .....+|||||||+|.++..++++ ..+++++|+ +.+++.|++ ... .+.....++.. . ...
T Consensus 35 ~~il~~l~--l~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~ 110 (261)
T 3iv6_A 35 ENDIFLEN--IVPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGH 110 (261)
T ss_dssp HHHHHTTT--CCTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTC
T ss_pred HHHHHhcC--CCCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCC
Confidence 44555555 566789999999999999999987 458999999 889999887 222 22222222211 1 125
Q ss_pred ccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 256 ADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 256 ~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
||+|++..++|+++.++...++++++++| | ||++++.-
T Consensus 111 fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-P---GG~l~lS~ 148 (261)
T 3iv6_A 111 FDFVLNDRLINRFTTEEARRACLGMLSLV-G---SGTVRASV 148 (261)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHH-T---TSEEEEEE
T ss_pred ccEEEEhhhhHhCCHHHHHHHHHHHHHhC-c---CcEEEEEe
Confidence 99999999999999888889999999999 9 89998764
No 91
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.29 E-value=2.3e-11 Score=109.09 Aligned_cols=100 Identities=16% Similarity=0.117 Sum_probs=81.8
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-c-----------CCCeEEEeccCCC-C----C--C
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-D-----------LANLKYVGGDMFE-A----I--P 254 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-~-----------~~rv~~~~~d~~~-~----~--p 254 (306)
....+|||||||+|.++..+++ .+..+++++|+ +.+++.+++ . ..+++++.+|+.+ + + +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKK-GRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCCEEEEECCCCcHHHHHHHh-cCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 3678999999999999999987 46779999999 888888776 1 2379999999987 3 3 2
Q ss_pred --CccEEEehhhhccC-C-chHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 255 --PADAVLLKWILHDW-N-DEECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 255 --~~D~~~~~~vlh~~-~-d~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
.+|+|++..++|+. . .++...+|++++++|+| ||.+++...
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lkp---gG~li~~~~ 156 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFESYEQADMMLRNACERLSP---GGYFIGTTP 156 (313)
T ss_dssp TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEE---EEEEEEEEE
T ss_pred CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCC---CcEEEEecC
Confidence 59999999999986 3 35567899999999999 898888755
No 92
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.28 E-value=1.4e-11 Score=113.42 Aligned_cols=108 Identities=15% Similarity=0.240 Sum_probs=86.9
Q ss_pred HHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cC--CCeEEEeccCCCCCC-
Q 021867 185 VVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DL--ANLKYVGGDMFEAIP- 254 (306)
Q Consensus 185 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~--~rv~~~~~d~~~~~p- 254 (306)
.+++.++ .....+|||+|||+|.++..+++.+|..+++++|. +.+++.+++ .. .+++|..+|++++.+
T Consensus 213 ~ll~~l~--~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~ 290 (375)
T 4dcm_A 213 FFMQHLP--ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEP 290 (375)
T ss_dssp HHHHTCC--CSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCT
T ss_pred HHHHhCc--ccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCC
Confidence 3455555 33458999999999999999999999999999999 888888876 11 368999999999765
Q ss_pred -CccEEEehhhhcc---CCchHHHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 255 -PADAVLLKWILHD---WNDEECVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 255 -~~D~~~~~~vlh~---~~d~~~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
.||+|++.-.+|. ..+.....+++++++.|+| ||+++|+.
T Consensus 291 ~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~iv~ 334 (375)
T 4dcm_A 291 FRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKI---NGELYIVA 334 (375)
T ss_dssp TCEEEEEECCCC-------CCHHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred CCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCC---CcEEEEEE
Confidence 5999999998885 3455566899999999999 89999864
No 93
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.28 E-value=2.9e-11 Score=99.81 Aligned_cols=108 Identities=16% Similarity=0.338 Sum_probs=87.0
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCC--CeEEEeccCCCCCC-
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLA--NLKYVGGDMFEAIP- 254 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~--rv~~~~~d~~~~~p- 254 (306)
..+++.+. .....+|||+|||+|.++..+++. ..+++++|+ +.+++.+++ ..+ |+++..+|+.++.+
T Consensus 42 ~~l~~~~~--~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~ 117 (194)
T 1dus_A 42 KILVENVV--VDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKD 117 (194)
T ss_dssp HHHHHHCC--CCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTT
T ss_pred HHHHHHcc--cCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccccc
Confidence 34455554 456789999999999999999988 679999999 888888776 223 59999999988544
Q ss_pred -CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 255 -PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 255 -~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
.+|+|++..++|. ..+....+++++++.|+| ||++++....
T Consensus 118 ~~~D~v~~~~~~~~-~~~~~~~~l~~~~~~L~~---gG~l~~~~~~ 159 (194)
T 1dus_A 118 RKYNKIITNPPIRA-GKEVLHRIIEEGKELLKD---NGEIWVVIQT 159 (194)
T ss_dssp SCEEEEEECCCSTT-CHHHHHHHHHHHHHHEEE---EEEEEEEEES
T ss_pred CCceEEEECCCccc-chhHHHHHHHHHHHHcCC---CCEEEEEECC
Confidence 5999999888873 445567899999999999 8999988764
No 94
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.28 E-value=2.5e-11 Score=105.45 Aligned_cols=100 Identities=10% Similarity=0.137 Sum_probs=81.7
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCC-CCeEEEecc-hHHHHhchh------cCCCeEEEeccCCC--C-CC---CccEE
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFP-NLECTDFDL-PHVVNGLES------DLANLKYVGGDMFE--A-IP---PADAV 259 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~--~-~p---~~D~~ 259 (306)
..+..+|||||||+|..+..+++.+| +.+++++|+ +.+++.|++ ..++|+++.+|+.+ + .+ .||+|
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 45678999999999999999999998 789999999 888888876 34689999999865 2 21 59999
Q ss_pred EehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecC
Q 021867 260 LLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRE 301 (306)
Q Consensus 260 ~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~ 301 (306)
++.. +.+....+|+++++.|+| ||.|++.+....
T Consensus 141 ~~d~-----~~~~~~~~l~~~~~~Lkp---GG~lv~~~~~~~ 174 (248)
T 3tfw_A 141 FIDA-----DKPNNPHYLRWALRYSRP---GTLIIGDNVVRD 174 (248)
T ss_dssp EECS-----CGGGHHHHHHHHHHTCCT---TCEEEEECCSGG
T ss_pred EECC-----chHHHHHHHHHHHHhcCC---CeEEEEeCCCcC
Confidence 9854 334456789999999999 898887766554
No 95
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.26 E-value=7.5e-12 Score=113.95 Aligned_cols=111 Identities=16% Similarity=0.265 Sum_probs=89.7
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh----cCCCeEEEeccCCCCCC-Ccc
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES----DLANLKYVGGDMFEAIP-PAD 257 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~----~~~rv~~~~~d~~~~~p-~~D 257 (306)
..+++.+. .....+|||+|||+|.++..+++.+|+.+++++|. +.+++.+++ ..-.+++..+|+++..+ .||
T Consensus 186 ~~ll~~l~--~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~fD 263 (343)
T 2pjd_A 186 QLLLSTLT--PHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRFD 263 (343)
T ss_dssp HHHHHHSC--TTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCEE
T ss_pred HHHHHhcC--cCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCCee
Confidence 44555554 23456899999999999999999999999999999 778888876 23347788999987434 699
Q ss_pred EEEehhhhcc---CCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 258 AVLLKWILHD---WNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 258 ~~~~~~vlh~---~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
+|++..++|+ ++.+....+|+++++.|+| ||+++|+...
T Consensus 264 ~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~ 305 (343)
T 2pjd_A 264 MIISNPPFHDGMQTSLDAAQTLIRGAVRHLNS---GGELRIVANA 305 (343)
T ss_dssp EEEECCCCCSSSHHHHHHHHHHHHHHGGGEEE---EEEEEEEEET
T ss_pred EEEECCCcccCccCCHHHHHHHHHHHHHhCCC---CcEEEEEEcC
Confidence 9999999986 3455668899999999999 8999998653
No 96
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.26 E-value=5.2e-11 Score=104.21 Aligned_cols=104 Identities=24% Similarity=0.325 Sum_probs=83.5
Q ss_pred cCCCeEEEecCCc--c-HHHHHHHHHCCCCeEEEecc-hHHHHhchh-c----CCCeEEEeccCCCCC-----C----Cc
Q 021867 195 EGLNSLVDVGGGI--G-TVAKAIAKAFPNLECTDFDL-PHVVNGLES-D----LANLKYVGGDMFEAI-----P----PA 256 (306)
Q Consensus 195 ~~~~~vlDvGgG~--G-~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-~----~~rv~~~~~d~~~~~-----p----~~ 256 (306)
.+..+|||||||. + .....+.+..|+.+++++|. |.|+++|++ . ..+++|+.+|+.++. | .+
T Consensus 77 ~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~ 156 (277)
T 3giw_A 77 AGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTL 156 (277)
T ss_dssp SCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTC
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhccccccccc
Confidence 3567999999996 3 44444455789999999999 999999987 2 347999999998731 1 24
Q ss_pred c-----EEEehhhhccCCchH-HHHHHHHHHHhcCCCCCCcEEEEEeeecC
Q 021867 257 D-----AVLLKWILHDWNDEE-CVKILKKCKEAVTSDDKKGKVIIIDMIRE 301 (306)
Q Consensus 257 D-----~~~~~~vlh~~~d~~-~~~iL~~~~~~L~p~~~gg~lli~e~~~~ 301 (306)
| .+++..+||+.+|++ ...+|++++++|+| ||.|+|.+...+
T Consensus 157 D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~P---GG~Lvls~~~~d 204 (277)
T 3giw_A 157 DLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPS---GSYLAMSIGTAE 204 (277)
T ss_dssp CTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCT---TCEEEEEEECCT
T ss_pred CcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCC---CcEEEEEeccCC
Confidence 4 688999999999865 47899999999999 999999887654
No 97
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.25 E-value=3.7e-11 Score=100.48 Aligned_cols=96 Identities=14% Similarity=0.144 Sum_probs=79.9
Q ss_pred eEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh----cCCCeEEEeccCCC-CCC--CccEEEehhhhccCCc
Q 021867 199 SLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES----DLANLKYVGGDMFE-AIP--PADAVLLKWILHDWND 270 (306)
Q Consensus 199 ~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~----~~~rv~~~~~d~~~-~~p--~~D~~~~~~vlh~~~d 270 (306)
+|||||||+|.++..+++. ..+++++|. +.+++.+++ ...++++..+|+.+ +.+ .||+|++. +++++.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~--~~~~~~ 107 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSI--FCHLPS 107 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEE--CCCCCH
T ss_pred CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEE--hhcCCH
Confidence 9999999999999999986 468999999 788888876 23489999999988 554 59999985 344566
Q ss_pred hHHHHHHHHHHHhcCCCCCCcEEEEEeeecC
Q 021867 271 EECVKILKKCKEAVTSDDKKGKVIIIDMIRE 301 (306)
Q Consensus 271 ~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~ 301 (306)
++...+|+++++.|+| ||++++.+....
T Consensus 108 ~~~~~~l~~~~~~L~p---gG~l~~~~~~~~ 135 (202)
T 2kw5_A 108 SLRQQLYPKVYQGLKP---GGVFILEGFAPE 135 (202)
T ss_dssp HHHHHHHHHHHTTCCS---SEEEEEEEECTT
T ss_pred HHHHHHHHHHHHhcCC---CcEEEEEEeccc
Confidence 7778999999999999 899999876543
No 98
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.25 E-value=1.9e-11 Score=107.74 Aligned_cols=103 Identities=17% Similarity=0.176 Sum_probs=82.3
Q ss_pred HHHhhchhhhcCCCeEEEecCCccHHHHHHHHH-CCCCeEEEecc-hHHHHhchh---c---CCCeEEEeccCCCCCC--
Q 021867 185 VVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKA-FPNLECTDFDL-PHVVNGLES---D---LANLKYVGGDMFEAIP-- 254 (306)
Q Consensus 185 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~Dl-~~~~~~a~~---~---~~rv~~~~~d~~~~~p-- 254 (306)
.++..++ ..+..+|||+|||+|.++..+++. +|..+++++|+ +.+++.+++ . .+++++..+|+.++.+
T Consensus 101 ~~~~~~~--~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~ 178 (275)
T 1yb2_A 101 YIIMRCG--LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQ 178 (275)
T ss_dssp -----CC--CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSC
T ss_pred HHHHHcC--CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCC
Confidence 4444444 566789999999999999999998 78899999999 888888876 2 2689999999998655
Q ss_pred CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 255 PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 255 ~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
.||+|++ ++++. ..+|+++.+.|+| ||++++....
T Consensus 179 ~fD~Vi~-----~~~~~--~~~l~~~~~~Lkp---gG~l~i~~~~ 213 (275)
T 1yb2_A 179 MYDAVIA-----DIPDP--WNHVQKIASMMKP---GSVATFYLPN 213 (275)
T ss_dssp CEEEEEE-----CCSCG--GGSHHHHHHTEEE---EEEEEEEESS
T ss_pred CccEEEE-----cCcCH--HHHHHHHHHHcCC---CCEEEEEeCC
Confidence 4999998 45554 3789999999999 8999988754
No 99
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.25 E-value=2e-11 Score=103.73 Aligned_cols=105 Identities=17% Similarity=0.251 Sum_probs=84.7
Q ss_pred HHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhcCCCeEEEeccCCC---CCC--Cc
Q 021867 183 TRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESDLANLKYVGGDMFE---AIP--PA 256 (306)
Q Consensus 183 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~---~~p--~~ 256 (306)
...+++.++ ....+|||||||+|.++..+++. + .+++++|+ +.+++.+++.. .++..+|+.+ +.+ .|
T Consensus 22 ~~~l~~~~~---~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~f 94 (230)
T 3cc8_A 22 NPNLLKHIK---KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKL--DHVVLGDIETMDMPYEEEQF 94 (230)
T ss_dssp CHHHHTTCC---TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTS--SEEEESCTTTCCCCSCTTCE
T ss_pred HHHHHHHhc---cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhC--CcEEEcchhhcCCCCCCCcc
Confidence 344555443 45689999999999999999988 4 89999999 88888887422 3788899875 333 49
Q ss_pred cEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 257 DAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 257 D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
|+|++..++|++++. ..+|+++++.|+| ||++++....
T Consensus 95 D~v~~~~~l~~~~~~--~~~l~~~~~~L~~---gG~l~~~~~~ 132 (230)
T 3cc8_A 95 DCVIFGDVLEHLFDP--WAVIEKVKPYIKQ---NGVILASIPN 132 (230)
T ss_dssp EEEEEESCGGGSSCH--HHHHHHTGGGEEE---EEEEEEEEEC
T ss_pred CEEEECChhhhcCCH--HHHHHHHHHHcCC---CCEEEEEeCC
Confidence 999999999999886 4789999999999 8999987654
No 100
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.25 E-value=2.6e-11 Score=102.80 Aligned_cols=105 Identities=14% Similarity=0.189 Sum_probs=84.2
Q ss_pred HHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhcCCCeEEEeccCCC----C-CC-C-c
Q 021867 185 VVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESDLANLKYVGGDMFE----A-IP-P-A 256 (306)
Q Consensus 185 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~----~-~p-~-~ 256 (306)
.++..+. .....+|||||||+|.++..+++. ..+++++|+ +.+++.+++. .++++..+|+.+ + .+ + |
T Consensus 43 ~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~f 117 (227)
T 3e8s_A 43 AILLAIL--GRQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAA-GAGEVHLASYAQLAEAKVPVGKDY 117 (227)
T ss_dssp HHHHHHH--HTCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHT-CSSCEEECCHHHHHTTCSCCCCCE
T ss_pred HHHHHhh--cCCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh-cccccchhhHHhhcccccccCCCc
Confidence 3444444 345689999999999999999988 568999999 8888888854 778888887754 1 12 3 9
Q ss_pred cEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 257 DAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 257 D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
|+|++..++| +.+. ..+|+++++.|+| ||+++|.+...
T Consensus 118 D~v~~~~~l~-~~~~--~~~l~~~~~~L~p---gG~l~~~~~~~ 155 (227)
T 3e8s_A 118 DLICANFALL-HQDI--IELLSAMRTLLVP---GGALVIQTLHP 155 (227)
T ss_dssp EEEEEESCCC-SSCC--HHHHHHHHHTEEE---EEEEEEEECCT
T ss_pred cEEEECchhh-hhhH--HHHHHHHHHHhCC---CeEEEEEecCc
Confidence 9999999999 6654 4789999999999 89999987643
No 101
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.25 E-value=3.5e-11 Score=99.30 Aligned_cols=102 Identities=14% Similarity=0.196 Sum_probs=77.1
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCC--CC-C-CccEEEehh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFE--AI-P-PADAVLLKW 263 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~--~~-p-~~D~~~~~~ 263 (306)
.....+|||+|||+|.++..++++ ..+++++|+ +.+++.|++ ..++++++..|+.. +. + .||+|++..
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~ 97 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNL 97 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeC
Confidence 356789999999999999999987 779999999 889988876 23789999977655 12 3 499998763
Q ss_pred -hhcc----C--CchHHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 264 -ILHD----W--NDEECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 264 -vlh~----~--~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
.++. + ..+....+|+++++.|+| ||+++++...-
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~ 138 (185)
T 3mti_A 98 GYLPSADKSVITKPHTTLEAIEKILDRLEV---GGRLAIMIYYG 138 (185)
T ss_dssp C-----------CHHHHHHHHHHHHHHEEE---EEEEEEEEC--
T ss_pred CCCCCcchhcccChhhHHHHHHHHHHhcCC---CcEEEEEEeCC
Confidence 3322 0 224456789999999999 89999986643
No 102
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.25 E-value=3.4e-11 Score=114.29 Aligned_cols=107 Identities=14% Similarity=0.147 Sum_probs=88.1
Q ss_pred HHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchh------cCCCeEEEeccCCC-CCC-
Q 021867 183 TRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLES------DLANLKYVGGDMFE-AIP- 254 (306)
Q Consensus 183 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~------~~~rv~~~~~d~~~-~~p- 254 (306)
...+++.+. ..+..+|||||||+|.++..+++ .+..+++++|+.++++.|++ ..++|+++.+|+.+ +.+
T Consensus 147 ~~~il~~l~--~~~~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~ 223 (480)
T 3b3j_A 147 QRAILQNHT--DFKDKIVLDVGCGSGILSFFAAQ-AGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPE 223 (480)
T ss_dssp HHHHHHTGG--GTTTCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSS
T ss_pred HHHHHHhhh--hcCCCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccCC
Confidence 344555554 44568999999999999998887 67789999999668877775 34899999999998 665
Q ss_pred CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEE
Q 021867 255 PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVII 295 (306)
Q Consensus 255 ~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli 295 (306)
.||+|++..++|++.++.....+.++++.|+| ||++++
T Consensus 224 ~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~Lkp---gG~li~ 261 (480)
T 3b3j_A 224 QVDIIISEPMGYMLFNERMLESYLHAKKYLKP---SGNMFP 261 (480)
T ss_dssp CEEEEECCCCHHHHTCHHHHHHHHHGGGGEEE---EEEEES
T ss_pred CeEEEEEeCchHhcCcHHHHHHHHHHHHhcCC---CCEEEE
Confidence 59999998888888877778889999999999 788874
No 103
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.24 E-value=5.5e-11 Score=100.68 Aligned_cols=98 Identities=19% Similarity=0.310 Sum_probs=79.5
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCC-C--CC--CccEEEehhh
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFE-A--IP--PADAVLLKWI 264 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~-~--~p--~~D~~~~~~v 264 (306)
...+|||||||+|.++..+++.+|+.+++++|+ +.+++.|++ ..++|+++.+|+.+ + ++ .+|+|++...
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 457899999999999999999999999999999 888888876 24789999999987 3 44 4999998865
Q ss_pred hccCCch-------HHHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 265 LHDWNDE-------ECVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 265 lh~~~d~-------~~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
.+ |... ....+++++.+.|+| ||.+++..
T Consensus 121 ~~-~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~ 156 (214)
T 1yzh_A 121 DP-WPKKRHEKRRLTYKTFLDTFKRILPE---NGEIHFKT 156 (214)
T ss_dssp CC-CCSGGGGGGSTTSHHHHHHHHHHSCT---TCEEEEEE
T ss_pred CC-ccccchhhhccCCHHHHHHHHHHcCC---CcEEEEEe
Confidence 43 3221 124689999999999 89888753
No 104
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.24 E-value=1.5e-11 Score=106.84 Aligned_cols=104 Identities=14% Similarity=0.206 Sum_probs=85.6
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHH-CCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCCCCC-
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKA-FPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFEAIP- 254 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~~~p- 254 (306)
..++..++ .....+|||+|||+|.++..+++. .|..+++++|+ +.+++.|++ ..+++++..+|+.++++
T Consensus 83 ~~i~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 160 (255)
T 3mb5_A 83 ALIVAYAG--ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEE 160 (255)
T ss_dssp HHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCC
T ss_pred HHHHHhhC--CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCC
Confidence 34445454 566789999999999999999999 88999999999 788888876 35679999999998665
Q ss_pred -CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 255 -PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 255 -~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
.+|+|++ ++++. ..+++++++.|+| ||++++....
T Consensus 161 ~~~D~v~~-----~~~~~--~~~l~~~~~~L~~---gG~l~~~~~~ 196 (255)
T 3mb5_A 161 ENVDHVIL-----DLPQP--ERVVEHAAKALKP---GGFFVAYTPC 196 (255)
T ss_dssp CSEEEEEE-----CSSCG--GGGHHHHHHHEEE---EEEEEEEESS
T ss_pred CCcCEEEE-----CCCCH--HHHHHHHHHHcCC---CCEEEEEECC
Confidence 4999987 45554 3679999999999 8999988754
No 105
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.24 E-value=1.6e-11 Score=101.29 Aligned_cols=97 Identities=14% Similarity=0.126 Sum_probs=78.8
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cC-CCeEEEeccCCC-CCC-CccEEEehhh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DL-ANLKYVGGDMFE-AIP-PADAVLLKWI 264 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~-~rv~~~~~d~~~-~~p-~~D~~~~~~v 264 (306)
+..+.+|||+|||+|.++..++...|+++++++|+ +.+++.+++ .. .++++ .|..+ +.+ .||++++..+
T Consensus 47 l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa~k~ 124 (200)
T 3fzg_A 47 IKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFLLKM 124 (200)
T ss_dssp SCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEEETC
T ss_pred cCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhHhhH
Confidence 35688999999999999999999999999999999 899998887 22 35666 66665 333 4999999999
Q ss_pred hccCCchHHHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 265 LHDWNDEECVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 265 lh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
||.. ++ ....+.++++.|+| ||.++-.+
T Consensus 125 LHlL-~~-~~~al~~v~~~L~p---ggvfISfp 152 (200)
T 3fzg_A 125 LPVL-KQ-QDVNILDFLQLFHT---QNFVISFP 152 (200)
T ss_dssp HHHH-HH-TTCCHHHHHHTCEE---EEEEEEEE
T ss_pred HHhh-hh-hHHHHHHHHHHhCC---CCEEEEeC
Confidence 9999 33 34556699999999 66666666
No 106
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.23 E-value=1.1e-11 Score=106.62 Aligned_cols=101 Identities=15% Similarity=0.179 Sum_probs=80.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh----cCCCeEEEeccCCC---CCC--CccEEEe-hh
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES----DLANLKYVGGDMFE---AIP--PADAVLL-KW 263 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~----~~~rv~~~~~d~~~---~~p--~~D~~~~-~~ 263 (306)
....+|||||||+|.++..+++..+ .+++++|+ +.+++.|++ ...+++++.+|+.+ +++ .||+|++ .+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 4567999999999999999976544 38999999 888888887 34789999999865 344 4999998 55
Q ss_pred h--hccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 264 I--LHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 264 v--lh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
. .+++.......+++++++.|+| ||++++++..
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~r~Lkp---gG~l~~~~~~ 172 (236)
T 1zx0_A 138 PLSEETWHTHQFNFIKNHAFRLLKP---GGVLTYCNLT 172 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEE---EEEEEECCHH
T ss_pred ccchhhhhhhhHHHHHHHHHHhcCC---CeEEEEEecC
Confidence 4 4455555556789999999999 8999988753
No 107
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.23 E-value=5.8e-11 Score=110.74 Aligned_cols=111 Identities=18% Similarity=0.322 Sum_probs=86.5
Q ss_pred HHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhc-------hh-----c--CCCeEEEeccC
Q 021867 185 VVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGL-------ES-----D--LANLKYVGGDM 249 (306)
Q Consensus 185 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a-------~~-----~--~~rv~~~~~d~ 249 (306)
.+++.+. .....+|||||||+|.++..+++.++..+++++|+ +.+++.| ++ . .++|+++.+|.
T Consensus 233 ~ml~~l~--l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~ 310 (433)
T 1u2z_A 233 DVYQQCQ--LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKS 310 (433)
T ss_dssp HHHHHTT--CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSC
T ss_pred HHHHhcC--CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCc
Confidence 3444444 56678999999999999999999988889999999 6666666 44 2 37899998754
Q ss_pred C-CC--C----CCccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCCC
Q 021867 250 F-EA--I----PPADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENK 303 (306)
Q Consensus 250 ~-~~--~----p~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~~ 303 (306)
+ .+ + ..||+|++.++++ . ++....|+++.+.|+| ||++++.+.+.++.
T Consensus 311 ~~~~~~~~~~~~~FDvIvvn~~l~--~-~d~~~~L~el~r~LKp---GG~lVi~d~f~p~~ 365 (433)
T 1u2z_A 311 FVDNNRVAELIPQCDVILVNNFLF--D-EDLNKKVEKILQTAKV---GCKIISLKSLRSLT 365 (433)
T ss_dssp STTCHHHHHHGGGCSEEEECCTTC--C-HHHHHHHHHHHTTCCT---TCEEEESSCSSCTT
T ss_pred cccccccccccCCCCEEEEeCccc--c-ccHHHHHHHHHHhCCC---CeEEEEeeccCCcc
Confidence 4 32 2 2599999987774 2 3445779999999999 99999998887765
No 108
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.23 E-value=8.1e-12 Score=107.75 Aligned_cols=98 Identities=14% Similarity=0.107 Sum_probs=77.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh----cCCCeEEEeccCCC---CCC--CccEEEe---
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES----DLANLKYVGGDMFE---AIP--PADAVLL--- 261 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~----~~~rv~~~~~d~~~---~~p--~~D~~~~--- 261 (306)
....+|||||||.|..+..+++..|. +++++|+ |.+++.|++ ...+++++.+|... +.+ .||.|++
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~ 137 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeee
Confidence 45689999999999999999988774 7899999 899999887 45678888888654 344 4888764
Q ss_pred --hhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 262 --KWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 262 --~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
...++++++. ..++++++++||| ||++++++.
T Consensus 138 ~~~~~~~~~~~~--~~~~~e~~rvLkP---GG~l~f~~~ 171 (236)
T 3orh_A 138 PLSEETWHTHQF--NFIKNHAFRLLKP---GGVLTYCNL 171 (236)
T ss_dssp CCBGGGTTTHHH--HHHHHTHHHHEEE---EEEEEECCH
T ss_pred ecccchhhhcch--hhhhhhhhheeCC---CCEEEEEec
Confidence 5555555554 5789999999999 899887653
No 109
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.22 E-value=3.2e-11 Score=102.43 Aligned_cols=90 Identities=14% Similarity=0.123 Sum_probs=77.7
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhcCCCeEEEeccCCC-CCC--CccEEEehhhhccCCchH
Q 021867 197 LNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESDLANLKYVGGDMFE-AIP--PADAVLLKWILHDWNDEE 272 (306)
Q Consensus 197 ~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~-~~p--~~D~~~~~~vlh~~~d~~ 272 (306)
..+|||||||+|.++..+++. +++|. +.+++.+++. ++++..+|+.+ +.+ .||+|++..++|++++.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~- 118 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR--GVFVLKGTAENLPLKDESFDFALMVTTICFVDDP- 118 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT--TCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCH-
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc--CCEEEEcccccCCCCCCCeeEEEEcchHhhccCH-
Confidence 789999999999999988764 88998 8888888753 89999999987 554 49999999999999875
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 273 CVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 273 ~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
..+|++++++|+| ||++++.+..
T Consensus 119 -~~~l~~~~~~L~p---gG~l~i~~~~ 141 (219)
T 1vlm_A 119 -ERALKEAYRILKK---GGYLIVGIVD 141 (219)
T ss_dssp -HHHHHHHHHHEEE---EEEEEEEEEC
T ss_pred -HHHHHHHHHHcCC---CcEEEEEEeC
Confidence 4789999999999 8999988754
No 110
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.22 E-value=5.2e-11 Score=101.00 Aligned_cols=98 Identities=20% Similarity=0.313 Sum_probs=78.0
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCC-C--CC--CccEEEehhh
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFE-A--IP--PADAVLLKWI 264 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~-~--~p--~~D~~~~~~v 264 (306)
...+|||||||+|.++..+++.+|+.+++++|+ +.+++.|++ ..++|+++.+|+.+ + ++ .+|.+++...
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 457899999999999999999999999999999 888888776 34689999999876 3 44 4898877544
Q ss_pred hccCCchH-------HHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 265 LHDWNDEE-------CVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 265 lh~~~d~~-------~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
.. |.... ...+|+++++.|+| ||++++..
T Consensus 118 ~p-~~~~~~~~~rl~~~~~l~~~~~~Lkp---gG~l~~~t 153 (213)
T 2fca_A 118 DP-WPKKRHEKRRLTYSHFLKKYEEVMGK---GGSIHFKT 153 (213)
T ss_dssp CC-CCSGGGGGGSTTSHHHHHHHHHHHTT---SCEEEEEE
T ss_pred CC-CcCccccccccCcHHHHHHHHHHcCC---CCEEEEEe
Confidence 32 32211 24689999999999 89988764
No 111
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.22 E-value=2.2e-11 Score=108.95 Aligned_cols=99 Identities=12% Similarity=0.147 Sum_probs=76.8
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh----cCC-------CeEEEeccCCC---------CCC
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES----DLA-------NLKYVGGDMFE---------AIP 254 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~----~~~-------rv~~~~~d~~~---------~~p 254 (306)
...+|||||||+|..+..+++. ...+++++|+ +.+++.|++ ... +++|...|+.. +.+
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~-~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG-EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhc-CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 4679999999999877766654 3458999999 899999887 111 26788888721 233
Q ss_pred --CccEEEehhhhcc-CCchHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 255 --PADAVLLKWILHD-WNDEECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 255 --~~D~~~~~~vlh~-~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
.||+|++..++|+ |++++...+|++++++|+| ||++++...
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~Lkp---GG~~i~~~~ 170 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTAS---GGKVLITTM 170 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEE---EEEEEEEEE
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCC---CCEEEEEeC
Confidence 5999999999997 4545567899999999999 899887654
No 112
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.22 E-value=4.7e-11 Score=97.58 Aligned_cols=95 Identities=16% Similarity=0.233 Sum_probs=79.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhcCCCeEEEeccCCCCCC--CccEEEehhhhccCCch
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESDLANLKYVGGDMFEAIP--PADAVLLKWILHDWNDE 271 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~~~p--~~D~~~~~~vlh~~~d~ 271 (306)
....+|||+|||+|.++..++++. +++++|+ +.+++. .++++++.+|+.++.+ .||+|+++..+|..++.
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~----~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~~~~~~ 94 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES----HRGGNLVRADLLCSINQESVDVVVFNPPYVPDTDD 94 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT----CSSSCEEECSTTTTBCGGGCSEEEECCCCBTTCCC
T ss_pred CCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc----ccCCeEEECChhhhcccCCCCEEEECCCCccCCcc
Confidence 345699999999999999999987 8999999 777776 5789999999998655 59999999888865544
Q ss_pred -------HHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 272 -------ECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 272 -------~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
+...+++++.+.+ | ||++++++...
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l-p---gG~l~~~~~~~ 126 (170)
T 3q87_B 95 PIIGGGYLGREVIDRFVDAV-T---VGMLYLLVIEA 126 (170)
T ss_dssp TTTBCCGGGCHHHHHHHHHC-C---SSEEEEEEEGG
T ss_pred ccccCCcchHHHHHHHHhhC-C---CCEEEEEEecC
Confidence 3467899999999 8 89999987543
No 113
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.21 E-value=1.9e-11 Score=104.15 Aligned_cols=98 Identities=21% Similarity=0.291 Sum_probs=78.1
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCCC----CC--CccEEEehh
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFEA----IP--PADAVLLKW 263 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~~----~p--~~D~~~~~~ 263 (306)
...+|||||||+|.++..+++.+|+.+++++|+ +.+++.|++ ..++|+++.+|+.+. ++ .+|.|++.+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 457899999999999999999999999999999 888888765 356799999998662 44 489998875
Q ss_pred hhccCCchHH-------HHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 264 ILHDWNDEEC-------VKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 264 vlh~~~d~~~-------~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
... |+.... ..+++.+++.|+| ||++++..
T Consensus 114 ~~p-~~~~~~~~rr~~~~~~l~~~~r~Lkp---GG~l~i~t 150 (218)
T 3dxy_A 114 PDP-WHKARHNKRRIVQVPFAELVKSKLQL---GGVFHMAT 150 (218)
T ss_dssp CCC-CCSGGGGGGSSCSHHHHHHHHHHEEE---EEEEEEEE
T ss_pred CCC-ccchhhhhhhhhhHHHHHHHHHHcCC---CcEEEEEe
Confidence 543 332211 1489999999999 88888754
No 114
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.21 E-value=1.2e-10 Score=98.05 Aligned_cols=94 Identities=16% Similarity=0.211 Sum_probs=77.2
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----c-CCCeEEEeccCCCC---CCCccEEEehh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----D-LANLKYVGGDMFEA---IPPADAVLLKW 263 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~-~~rv~~~~~d~~~~---~p~~D~~~~~~ 263 (306)
.....+|||||||+|.++..+++. ..+++++|+ +.+++.|++ . .++++++.+|+.+. .+.||++++..
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~ 130 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGG 130 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECS
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECC
Confidence 456789999999999999999988 779999999 888888876 2 34899999999882 34699999876
Q ss_pred hhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 264 ILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 264 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
.+ +. . +++++++.|+| ||++++....
T Consensus 131 ~~----~~--~-~l~~~~~~Lkp---gG~lv~~~~~ 156 (204)
T 3njr_A 131 GG----SQ--A-LYDRLWEWLAP---GTRIVANAVT 156 (204)
T ss_dssp CC----CH--H-HHHHHHHHSCT---TCEEEEEECS
T ss_pred cc----cH--H-HHHHHHHhcCC---CcEEEEEecC
Confidence 44 22 3 89999999999 8999886543
No 115
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.21 E-value=3.1e-11 Score=101.31 Aligned_cols=98 Identities=14% Similarity=0.219 Sum_probs=80.7
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCCCCC-CccEEEehhhhc
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFEAIP-PADAVLLKWILH 266 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~~~p-~~D~~~~~~vlh 266 (306)
.....+|||||||+|.++..+++ .+..+++++|+ +.+++.|++ ..+++++..+|+.+..+ .||+|++..++|
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~~~~ 136 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHK-LGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILAE 136 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEESCHH
T ss_pred ccCCCEEEEECCCCCHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECCcHH
Confidence 34668999999999999999876 57779999999 888888876 23349999999988444 699999988776
Q ss_pred cCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 267 DWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 267 ~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
+ ...+++++++.|+| ||++++.+...
T Consensus 137 ~-----~~~~l~~~~~~L~~---gG~l~~~~~~~ 162 (205)
T 3grz_A 137 I-----LLDLIPQLDSHLNE---DGQVIFSGIDY 162 (205)
T ss_dssp H-----HHHHGGGSGGGEEE---EEEEEEEEEEG
T ss_pred H-----HHHHHHHHHHhcCC---CCEEEEEecCc
Confidence 4 35789999999999 89999876654
No 116
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.21 E-value=7.7e-11 Score=100.96 Aligned_cols=95 Identities=17% Similarity=0.224 Sum_probs=77.7
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh---cCCCeEEEeccCCCC-----CC-CccEEEehh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES---DLANLKYVGGDMFEA-----IP-PADAVLLKW 263 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~---~~~rv~~~~~d~~~~-----~p-~~D~~~~~~ 263 (306)
+.+..+|||+|||+|.++..+++.+|..+++++|. +.+++.+++ ..++++++.+|+.++ .+ .+|+|+
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~--- 148 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIY--- 148 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEE---
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEE---
Confidence 45678999999999999999999998889999999 788877765 347899999999762 22 589988
Q ss_pred hhccCCch-HHHHHHHHHHHhcCCCCCCcEEEEE
Q 021867 264 ILHDWNDE-ECVKILKKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 264 vlh~~~d~-~~~~iL~~~~~~L~p~~~gg~lli~ 296 (306)
|+++++ ....+|+++++.|+| ||++++.
T Consensus 149 --~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~ 177 (230)
T 1fbn_A 149 --EDVAQPNQAEILIKNAKWFLKK---GGYGMIA 177 (230)
T ss_dssp --ECCCSTTHHHHHHHHHHHHEEE---EEEEEEE
T ss_pred --EecCChhHHHHHHHHHHHhCCC---CcEEEEE
Confidence 666554 335669999999999 8999886
No 117
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.20 E-value=3.9e-11 Score=109.42 Aligned_cols=107 Identities=15% Similarity=0.160 Sum_probs=86.5
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchh------cCCCeEEEeccCCC-CCC-C
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLES------DLANLKYVGGDMFE-AIP-P 255 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~------~~~rv~~~~~d~~~-~~p-~ 255 (306)
..+++.+. ..+..+|||||||+|.++..+++. +..+++++|..++++.|++ ..++|+++.+|+.+ +.+ .
T Consensus 40 ~~i~~~l~--~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~ 116 (348)
T 2y1w_A 40 RAILQNHT--DFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQ 116 (348)
T ss_dssp HHHHHTGG--GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSC
T ss_pred HHHHhccc--cCCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCc
Confidence 34455544 446789999999999999998875 5679999999767777765 34789999999988 555 5
Q ss_pred ccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEE
Q 021867 256 ADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 256 ~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~ 296 (306)
+|+|++..++|++..+.....+.++++.|+| ||++++.
T Consensus 117 ~D~Ivs~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~li~~ 154 (348)
T 2y1w_A 117 VDIIISEPMGYMLFNERMLESYLHAKKYLKP---SGNMFPT 154 (348)
T ss_dssp EEEEEECCCBTTBTTTSHHHHHHHGGGGEEE---EEEEESC
T ss_pred eeEEEEeCchhcCChHHHHHHHHHHHhhcCC---CeEEEEe
Confidence 9999999998888877777889999999999 8888743
No 118
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.20 E-value=6.5e-12 Score=105.65 Aligned_cols=101 Identities=18% Similarity=0.199 Sum_probs=67.3
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhc----CCCeEEEeccCCCCC-------CCccEEEeh
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESD----LANLKYVGGDMFEAI-------PPADAVLLK 262 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~----~~rv~~~~~d~~~~~-------p~~D~~~~~ 262 (306)
....+|||+|||+|.++..+++.+|+.+++++|+ +.+++.+++. ..+++++.+|+.++. ..||+|++.
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~n 108 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVSN 108 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEEC
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEEC
Confidence 5678999999999999999999999999999999 8888888761 117999999998732 359999996
Q ss_pred hhhc------cCCchHH------------------HHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 263 WILH------DWNDEEC------------------VKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 263 ~vlh------~~~d~~~------------------~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
-.+| .++++.. ..+++++++.|+| ||++++++.
T Consensus 109 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~ 165 (215)
T 4dzr_A 109 PPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLAR---GRAGVFLEV 165 (215)
T ss_dssp CCCCC------------------------CTTHHHHHHHTCCGGGBCS---SSEEEEEEC
T ss_pred CCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcC---CCeEEEEEE
Confidence 4443 3333222 6789999999999 899666654
No 119
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.19 E-value=4.9e-11 Score=99.38 Aligned_cols=104 Identities=15% Similarity=0.194 Sum_probs=82.2
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHC-CCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCC-C-CC--CccEEEe
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAF-PNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFE-A-IP--PADAVLL 261 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~-~-~p--~~D~~~~ 261 (306)
.....+|||+|||+|.++..+++.+ |..+++++|+ +.+++.|++ ..++++++.+|+.+ + .. .||+|++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 99 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMF 99 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEE
Confidence 3556799999999999999999986 6779999999 888888876 14789999999876 2 22 5999998
Q ss_pred hhhhcc-------CCchHHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 262 KWILHD-------WNDEECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 262 ~~vlh~-------~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
...+.. ...+....+++++.+.|+| ||+++++...-
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~---gG~l~~~~~~~ 142 (197)
T 3eey_A 100 NLGYLPSGDHSISTRPETTIQALSKAMELLVT---GGIITVVIYYG 142 (197)
T ss_dssp EESBCTTSCTTCBCCHHHHHHHHHHHHHHEEE---EEEEEEEECCB
T ss_pred cCCcccCcccccccCcccHHHHHHHHHHhCcC---CCEEEEEEccC
Confidence 765511 1123445799999999999 89999887543
No 120
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.19 E-value=5.5e-11 Score=103.15 Aligned_cols=101 Identities=17% Similarity=0.205 Sum_probs=82.4
Q ss_pred CCCeEEEecCCccHHHHHHHHH--CCCCeEEEecc-hHHHHhchh--cCC-------C----------------------
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKA--FPNLECTDFDL-PHVVNGLES--DLA-------N---------------------- 241 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~--~p~~~~~~~Dl-~~~~~~a~~--~~~-------r---------------------- 241 (306)
...+|||+|||+|.++..+++. +|..+++++|+ +.+++.|++ ... +
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 5679999999999999999998 78889999999 888888885 111 2
Q ss_pred ---eE-------------EEeccCCCCC------C--CccEEEehhhhccCCc-------hHHHHHHHHHHHhcCCCCCC
Q 021867 242 ---LK-------------YVGGDMFEAI------P--PADAVLLKWILHDWND-------EECVKILKKCKEAVTSDDKK 290 (306)
Q Consensus 242 ---v~-------------~~~~d~~~~~------p--~~D~~~~~~vlh~~~d-------~~~~~iL~~~~~~L~p~~~g 290 (306)
|+ |..+|++++. + .||+|++..+++...+ +....+++++++.|+| |
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---g 207 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPA---H 207 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCT---T
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCC---C
Confidence 77 9999999843 3 5999999877665443 5567899999999999 8
Q ss_pred cEEEEEeee
Q 021867 291 GKVIIIDMI 299 (306)
Q Consensus 291 g~lli~e~~ 299 (306)
|++++++..
T Consensus 208 G~l~~~~~~ 216 (250)
T 1o9g_A 208 AVIAVTDRS 216 (250)
T ss_dssp CEEEEEESS
T ss_pred cEEEEeCcc
Confidence 999986543
No 121
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.19 E-value=3.4e-11 Score=102.08 Aligned_cols=98 Identities=14% Similarity=0.131 Sum_probs=74.0
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHh----chh-----cCCCeEEEeccCCC-CCC-CccEEEe
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNG----LES-----DLANLKYVGGDMFE-AIP-PADAVLL 261 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~----a~~-----~~~rv~~~~~d~~~-~~p-~~D~~~~ 261 (306)
.....+|||||||+|.++..+++.+|..+++++|+ +.+++. +++ ..++++++.+|+.+ +.+ +.|.|++
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~d~v~~ 104 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGVGELHV 104 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCEEEEEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCCCEEEE
Confidence 45678999999999999999999999999999999 665553 322 34589999999988 544 2365552
Q ss_pred h---hhh--ccCCchHHHHHHHHHHHhcCCCCCCcEEEEE
Q 021867 262 K---WIL--HDWNDEECVKILKKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 262 ~---~vl--h~~~d~~~~~iL~~~~~~L~p~~~gg~lli~ 296 (306)
. ..+ |+.++. ..+|++++++|+| ||++++.
T Consensus 105 ~~~~~~~~~~~~~~~--~~~l~~~~~~Lkp---gG~l~~~ 139 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSS--PEMLRGMAAVCRP---GASFLVA 139 (218)
T ss_dssp ESCCHHHHHHHHTSS--SHHHHHHHHTEEE---EEEEEEE
T ss_pred EccchhhhhhhhccH--HHHHHHHHHHcCC---CcEEEEE
Confidence 2 222 234443 4789999999999 8888884
No 122
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.19 E-value=1.1e-10 Score=102.74 Aligned_cols=99 Identities=22% Similarity=0.322 Sum_probs=80.9
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCCCCC--CccEEEehh---
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFEAIP--PADAVLLKW--- 263 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~~~p--~~D~~~~~~--- 263 (306)
....+|||+|||+|.++..+++.+|+.+++++|+ +.+++.+++ ..++++++.+|++++.+ .||+|++.-
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~fD~Iv~npPy~ 187 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMIVSNPPYI 187 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTTCCEEEEEECCCCB
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcccCCccEEEECCCCC
Confidence 3467999999999999999999999999999999 888888876 33589999999998553 599999973
Q ss_pred ----------hhccCCc----------hHHHHHHHHHHHhcCCCCCCcEEEEE
Q 021867 264 ----------ILHDWND----------EECVKILKKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 264 ----------vlh~~~d----------~~~~~iL~~~~~~L~p~~~gg~lli~ 296 (306)
++++.|. +....+++++++.|+| ||++++.
T Consensus 188 ~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~Lkp---gG~l~~~ 237 (276)
T 2b3t_A 188 DEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVS---GGFLLLE 237 (276)
T ss_dssp CTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEE---EEEEEEE
T ss_pred CccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCC---CCEEEEE
Confidence 4443332 3447899999999999 7888774
No 123
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.19 E-value=4.8e-11 Score=102.49 Aligned_cols=99 Identities=12% Similarity=0.257 Sum_probs=80.3
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCCCC-----CCccEEEe
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFEAI-----PPADAVLL 261 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~~~-----p~~D~~~~ 261 (306)
..+..+|||||||+|..+..+++.+|..+++++|+ +.+++.|++ ..++|+++.+|+.+.. ..||+|++
T Consensus 69 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 148 (232)
T 3ntv_A 69 MNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFI 148 (232)
T ss_dssp HHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEE
T ss_pred hcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEE
Confidence 34678999999999999999999889999999999 888888876 3469999999998732 25999986
Q ss_pred hhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 262 KWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 262 ~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
... .+....+++++.+.|+| ||+|++-+...
T Consensus 149 ~~~-----~~~~~~~l~~~~~~Lkp---gG~lv~d~~~~ 179 (232)
T 3ntv_A 149 DAA-----KAQSKKFFEIYTPLLKH---QGLVITDNVLY 179 (232)
T ss_dssp ETT-----SSSHHHHHHHHGGGEEE---EEEEEEECTTG
T ss_pred cCc-----HHHHHHHHHHHHHhcCC---CeEEEEeeCCc
Confidence 532 23346789999999999 88887755444
No 124
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.19 E-value=3.6e-11 Score=102.93 Aligned_cols=100 Identities=15% Similarity=0.094 Sum_probs=73.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc--hHHHHhc---hh-----cCCCeEEEeccCCC-CCCCccEEEehh
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL--PHVVNGL---ES-----DLANLKYVGGDMFE-AIPPADAVLLKW 263 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl--~~~~~~a---~~-----~~~rv~~~~~d~~~-~~p~~D~~~~~~ 263 (306)
....+|||||||+|.++..+++++|+.+++++|+ +.+++.| ++ ..+++++..+|+.+ |...+|.+.+..
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~ 102 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSIS 102 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEE
Confidence 4567999999999999999999999999999999 4555554 43 34689999999877 321235554444
Q ss_pred hhccCCchH------HHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 264 ILHDWNDEE------CVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 264 vlh~~~d~~------~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
+.+.|+... ...+|++++++|+| ||+++++.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~r~Lkp---GG~l~i~~ 139 (225)
T 3p2e_A 103 ILFPWGTLLEYVIKPNRDILSNVADLAKK---EAHFEFVT 139 (225)
T ss_dssp EESCCHHHHHHHHTTCHHHHHHHHTTEEE---EEEEEEEE
T ss_pred EeCCCcHHhhhhhcchHHHHHHHHHhcCC---CcEEEEEE
Confidence 443343311 13579999999999 89999843
No 125
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.19 E-value=6.6e-11 Score=103.22 Aligned_cols=98 Identities=15% Similarity=0.182 Sum_probs=78.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhcCCCeEEEeccCCC-CCC--CccEEEehhhhccCCc
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESDLANLKYVGGDMFE-AIP--PADAVLLKWILHDWND 270 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~-~~p--~~D~~~~~~vlh~~~d 270 (306)
....+|||||||+|.++..+++. ..+++++|+ +.+++.+++.... .+..+|+.+ +.+ .||+|++..+++++.+
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~-~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~ 129 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGVK-NVVEAKAEDLPFPSGAFEAVLALGDVLSYVE 129 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTCS-CEEECCTTSCCSCTTCEEEEEECSSHHHHCS
T ss_pred CCCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcCC-CEEECcHHHCCCCCCCEEEEEEcchhhhccc
Confidence 35689999999999999999987 468999999 8888888872222 288899987 554 4999999886665633
Q ss_pred hHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 271 EECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 271 ~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
+ ...+|+++++.|+| ||++++....
T Consensus 130 ~-~~~~l~~~~~~Lkp---gG~l~~~~~~ 154 (260)
T 2avn_A 130 N-KDKAFSEIRRVLVP---DGLLIATVDN 154 (260)
T ss_dssp C-HHHHHHHHHHHEEE---EEEEEEEEEB
T ss_pred c-HHHHHHHHHHHcCC---CeEEEEEeCC
Confidence 3 46899999999999 8999887543
No 126
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.18 E-value=3.4e-11 Score=102.56 Aligned_cols=102 Identities=13% Similarity=0.193 Sum_probs=81.9
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCC-CCeEEEecc-hHHHHhchh------cCCCeEEEeccCCC---CC------CCc
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFP-NLECTDFDL-PHVVNGLES------DLANLKYVGGDMFE---AI------PPA 256 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~---~~------p~~ 256 (306)
..++.+|||||||+|..+..+++..| +.+++++|+ +.+++.|++ ..++|+++.+|+.+ .. ..|
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 56 EYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred hcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 34678999999999999999999875 789999999 888888876 34689999999744 12 259
Q ss_pred cEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecC
Q 021867 257 DAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRE 301 (306)
Q Consensus 257 D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~ 301 (306)
|+|++....|.+.+. ..+++.+ +.|+| ||.|++.+...+
T Consensus 136 D~V~~d~~~~~~~~~--~~~~~~~-~~Lkp---gG~lv~~~~~~~ 174 (221)
T 3u81_A 136 DMVFLDHWKDRYLPD--TLLLEKC-GLLRK---GTVLLADNVIVP 174 (221)
T ss_dssp SEEEECSCGGGHHHH--HHHHHHT-TCCCT---TCEEEESCCCCC
T ss_pred EEEEEcCCcccchHH--HHHHHhc-cccCC---CeEEEEeCCCCc
Confidence 999998877766442 4677777 99999 898888776654
No 127
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.17 E-value=1.4e-10 Score=98.27 Aligned_cols=95 Identities=15% Similarity=0.171 Sum_probs=73.8
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHH----HHhchhcCCCeEEEeccCCCC-----CC-CccEEEeh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHV----VNGLESDLANLKYVGGDMFEA-----IP-PADAVLLK 262 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~----~~~a~~~~~rv~~~~~d~~~~-----~p-~~D~~~~~ 262 (306)
..+..+|||||||+|.++..+++..++.+++++|+ +.+ .+.++ ...++.++.+|+.++ .+ .||+|++.
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~-~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 133 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVR-ERNNIIPLLFDASKPWKYSGIVEKVDLIYQD 133 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHH-HCSSEEEECSCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHh-cCCCeEEEEcCCCCchhhcccccceeEEEEe
Confidence 45667999999999999999999988779999999 554 34444 346799999998763 22 59999886
Q ss_pred hhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEE
Q 021867 263 WILHDWNDEECVKILKKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 263 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~ 296 (306)
+.+ .++...+++++++.|+| ||++++.
T Consensus 134 -~~~---~~~~~~~l~~~~r~Lkp---gG~l~i~ 160 (210)
T 1nt2_A 134 -IAQ---KNQIEILKANAEFFLKE---KGEVVIM 160 (210)
T ss_dssp -CCS---TTHHHHHHHHHHHHEEE---EEEEEEE
T ss_pred -ccC---hhHHHHHHHHHHHHhCC---CCEEEEE
Confidence 222 23344569999999999 8999987
No 128
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.17 E-value=1.2e-10 Score=97.91 Aligned_cols=98 Identities=13% Similarity=0.165 Sum_probs=80.1
Q ss_pred HHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCCCCC---Cc
Q 021867 186 VIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFEAIP---PA 256 (306)
Q Consensus 186 ~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~~~p---~~ 256 (306)
+++.+. .....+|||||||+|.++..+++. ..+++++|+ +.+++.+++ ..+++++..+|+.+..+ .|
T Consensus 69 ~~~~l~--~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 144 (210)
T 3lbf_A 69 MTELLE--LTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPF 144 (210)
T ss_dssp HHHHTT--CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCE
T ss_pred HHHhcC--CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCc
Confidence 344444 566789999999999999999998 578999999 888888876 34589999999988332 59
Q ss_pred cEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 257 DAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 257 D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
|+|++..++|++++ ++++.|+| ||++++.-.
T Consensus 145 D~i~~~~~~~~~~~--------~~~~~L~p---gG~lv~~~~ 175 (210)
T 3lbf_A 145 DAIIVTAAPPEIPT--------ALMTQLDE---GGILVLPVG 175 (210)
T ss_dssp EEEEESSBCSSCCT--------HHHHTEEE---EEEEEEEEC
T ss_pred cEEEEccchhhhhH--------HHHHhccc---CcEEEEEEc
Confidence 99999999998886 46788999 898888643
No 129
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.17 E-value=8.5e-11 Score=98.64 Aligned_cols=92 Identities=21% Similarity=0.264 Sum_probs=76.6
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCCCCC--CccEEEehhhhccC
Q 021867 197 LNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFEAIP--PADAVLLKWILHDW 268 (306)
Q Consensus 197 ~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~~~p--~~D~~~~~~vlh~~ 268 (306)
..+|||||||+|.++..+++.+|..+++++|. +.+++.+++ ..+++++..+|+.+..+ .||+|++..+
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~---- 141 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAF---- 141 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSCS----
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEecc----
Confidence 67999999999999999999999999999999 888888776 23459999999988433 5999997542
Q ss_pred CchHHHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 269 NDEECVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 269 ~d~~~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
.+ ...+++++++.|+| ||++++..
T Consensus 142 ~~--~~~~l~~~~~~L~~---gG~l~~~~ 165 (207)
T 1jsx_A 142 AS--LNDMVSWCHHLPGE---QGRFYALK 165 (207)
T ss_dssp SS--HHHHHHHHTTSEEE---EEEEEEEE
T ss_pred CC--HHHHHHHHHHhcCC---CcEEEEEe
Confidence 22 35789999999999 89888874
No 130
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.17 E-value=1.2e-10 Score=98.35 Aligned_cols=100 Identities=14% Similarity=0.153 Sum_probs=81.4
Q ss_pred HHHhhchhhhcCCCeEEEecCCccHHHHHHHHHC-CCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCCCCC---
Q 021867 185 VVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAF-PNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFEAIP--- 254 (306)
Q Consensus 185 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~~~p--- 254 (306)
.+++.+. .....+|||||||+|.++..+++.. |+.+++++|. +.+++.+++ ..+++++..+|+..+.+
T Consensus 68 ~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 145 (215)
T 2yxe_A 68 MMCELLD--LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLA 145 (215)
T ss_dssp HHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGC
T ss_pred HHHHhhC--CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCC
Confidence 3344444 4567899999999999999999988 6689999999 888888876 34679999999876543
Q ss_pred CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 255 PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 255 ~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
.||+|++..++|++++ ++++.|+| ||++++..
T Consensus 146 ~fD~v~~~~~~~~~~~--------~~~~~L~p---gG~lv~~~ 177 (215)
T 2yxe_A 146 PYDRIYTTAAGPKIPE--------PLIRQLKD---GGKLLMPV 177 (215)
T ss_dssp CEEEEEESSBBSSCCH--------HHHHTEEE---EEEEEEEE
T ss_pred CeeEEEECCchHHHHH--------HHHHHcCC---CcEEEEEE
Confidence 5999999999998773 67888999 89988864
No 131
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.16 E-value=1.1e-10 Score=99.14 Aligned_cols=100 Identities=12% Similarity=0.137 Sum_probs=81.3
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCC-CCeEEEecc-hHHHHhchh------cCCCeEEEeccCCCC---C-----CCcc
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFP-NLECTDFDL-PHVVNGLES------DLANLKYVGGDMFEA---I-----PPAD 257 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~~---~-----p~~D 257 (306)
..+..+|||||||+|..+..+++.+| +.+++++|+ +.+++.|++ ..++|+++.+|+.+. . ..||
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 45678999999999999999999998 789999999 888888876 356899999998762 1 3499
Q ss_pred EEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecC
Q 021867 258 AVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRE 301 (306)
Q Consensus 258 ~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~ 301 (306)
+|++... .+....+++++.+.|+| ||.+++.+...+
T Consensus 136 ~v~~d~~-----~~~~~~~l~~~~~~L~p---gG~lv~~~~~~~ 171 (223)
T 3duw_A 136 FIFIDAD-----KQNNPAYFEWALKLSRP---GTVIIGDNVVRE 171 (223)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHTCCT---TCEEEEESCSGG
T ss_pred EEEEcCC-----cHHHHHHHHHHHHhcCC---CcEEEEeCCCcC
Confidence 9987644 33446789999999999 898887766654
No 132
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.16 E-value=1.3e-10 Score=105.89 Aligned_cols=97 Identities=15% Similarity=0.210 Sum_probs=78.3
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchh------cCCCeEEEeccCCC-CCC--CccEEEehhh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLES------DLANLKYVGGDMFE-AIP--PADAVLLKWI 264 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~------~~~rv~~~~~d~~~-~~p--~~D~~~~~~v 264 (306)
..+..+|||||||+|.++..++++ +..+++++|..++++.|++ ..++|+++.+|+.+ +.| .+|+|++..+
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWM 142 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCC
T ss_pred cCCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccc
Confidence 445689999999999999999987 6679999999778888776 45679999999998 665 5999998766
Q ss_pred hccCC-chHHHHHHHHHHHhcCCCCCCcEEE
Q 021867 265 LHDWN-DEECVKILKKCKEAVTSDDKKGKVI 294 (306)
Q Consensus 265 lh~~~-d~~~~~iL~~~~~~L~p~~~gg~ll 294 (306)
.|.+. .+....+++++.+.|+| ||+++
T Consensus 143 ~~~l~~~~~~~~~l~~~~r~Lkp---gG~li 170 (349)
T 3q7e_A 143 GYCLFYESMLNTVLHARDKWLAP---DGLIF 170 (349)
T ss_dssp BBTBTBTCCHHHHHHHHHHHEEE---EEEEE
T ss_pred cccccCchhHHHHHHHHHHhCCC---CCEEc
Confidence 54432 23345789999999999 78876
No 133
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.16 E-value=1.8e-11 Score=106.60 Aligned_cols=100 Identities=18% Similarity=0.167 Sum_probs=80.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh--cCC-------------------------------
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES--DLA------------------------------- 240 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~--~~~------------------------------- 240 (306)
....+|||||||+|.++..+++..+ .+++++|+ +.+++.+++ ...
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 3457999999999999999988776 58999999 788888876 111
Q ss_pred -Ce-EEEeccCCCC-C------CCccEEEehhhhccCCc--hHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 241 -NL-KYVGGDMFEA-I------PPADAVLLKWILHDWND--EECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 241 -rv-~~~~~d~~~~-~------p~~D~~~~~~vlh~~~d--~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
+| ++..+|+.+. . ..||+|++..+||+.++ ++...+|++++++|+| ||++++.+.
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~Lkp---gG~li~~~~ 199 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKP---GGFLVMVDA 199 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEE---EEEEEEEEE
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCC---CcEEEEEec
Confidence 28 9999999872 1 24999999999995432 2557899999999999 899998874
No 134
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.15 E-value=1.2e-10 Score=100.30 Aligned_cols=95 Identities=17% Similarity=0.141 Sum_probs=78.2
Q ss_pred CCCeEEEecCCccHHHHHHHHH----CCCCeEEEecc-hHHHHhchhcCCCeEEEeccCCCC----C-C--CccEEEehh
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKA----FPNLECTDFDL-PHVVNGLESDLANLKYVGGDMFEA----I-P--PADAVLLKW 263 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~----~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~~----~-p--~~D~~~~~~ 263 (306)
++.+|||||||+|..+..+++. +|+.+++++|+ +.+++.|+...++|+++.+|+.+. . + .||+|++..
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 4579999999999999999998 78999999999 788888775568999999999873 1 2 489998765
Q ss_pred hhccCCchHHHHHHHHHHH-hcCCCCCCcEEEEEee
Q 021867 264 ILHDWNDEECVKILKKCKE-AVTSDDKKGKVIIIDM 298 (306)
Q Consensus 264 vlh~~~d~~~~~iL~~~~~-~L~p~~~gg~lli~e~ 298 (306)
. |. +...+|+++.+ .|+| ||++++.+.
T Consensus 161 ~-~~----~~~~~l~~~~r~~Lkp---GG~lv~~d~ 188 (236)
T 2bm8_A 161 A-HA----NTFNIMKWAVDHLLEE---GDYFIIEDM 188 (236)
T ss_dssp S-CS----SHHHHHHHHHHHTCCT---TCEEEECSC
T ss_pred c-hH----hHHHHHHHHHHhhCCC---CCEEEEEeC
Confidence 4 52 34578999997 9999 899998763
No 135
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.15 E-value=3.3e-10 Score=93.85 Aligned_cols=100 Identities=11% Similarity=0.009 Sum_probs=80.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCCC---C--CCccEEEehh
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFEA---I--PPADAVLLKW 263 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~~---~--p~~D~~~~~~ 263 (306)
....+|||+|||+|.++..+++. +..+++++|+ +.+++.|++ ..++++++.+|+.+. . ..||+|++..
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECC
Confidence 35679999999999999988774 5568999999 888888886 236899999998772 2 2599999988
Q ss_pred hhccCCchHHHHHHHHHHH--hcCCCCCCcEEEEEeee
Q 021867 264 ILHDWNDEECVKILKKCKE--AVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 264 vlh~~~d~~~~~iL~~~~~--~L~p~~~gg~lli~e~~ 299 (306)
++|.. .++...+++.+.+ .|+| ||++++....
T Consensus 122 p~~~~-~~~~~~~l~~~~~~~~L~p---gG~l~~~~~~ 155 (189)
T 3p9n_A 122 PYNVD-SADVDAILAALGTNGWTRE---GTVAVVERAT 155 (189)
T ss_dssp CTTSC-HHHHHHHHHHHHHSSSCCT---TCEEEEEEET
T ss_pred CCCcc-hhhHHHHHHHHHhcCccCC---CeEEEEEecC
Confidence 86643 3456789999999 9999 8988886543
No 136
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.14 E-value=1.7e-10 Score=98.85 Aligned_cols=98 Identities=13% Similarity=0.249 Sum_probs=81.2
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCCC---C---CCccEEE
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFEA---I---PPADAVL 260 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~~---~---p~~D~~~ 260 (306)
..+..+|||||||+|..+..+++.+|..+++++|+ +.+++.|++ ..++|++..+|+.+. . ..||+|+
T Consensus 52 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 131 (233)
T 2gpy_A 52 MAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLF 131 (233)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEE
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEE
Confidence 34567999999999999999999999999999999 888888876 236899999999872 2 2599999
Q ss_pred ehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 261 LKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 261 ~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
+....+ ....+|+++.+.|+| ||++++.+..
T Consensus 132 ~~~~~~-----~~~~~l~~~~~~L~p---gG~lv~~~~~ 162 (233)
T 2gpy_A 132 IDAAKG-----QYRRFFDMYSPMVRP---GGLILSDNVL 162 (233)
T ss_dssp EEGGGS-----CHHHHHHHHGGGEEE---EEEEEEETTT
T ss_pred ECCCHH-----HHHHHHHHHHHHcCC---CeEEEEEcCC
Confidence 977654 235789999999999 8888887543
No 137
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.14 E-value=1.1e-10 Score=99.23 Aligned_cols=100 Identities=11% Similarity=0.112 Sum_probs=81.1
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCC-CCeEEEecc-hHHHHhchh------cCCCeEEEeccCCCC---C------CCc
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFP-NLECTDFDL-PHVVNGLES------DLANLKYVGGDMFEA---I------PPA 256 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~~---~------p~~ 256 (306)
..+..+|||||||+|..+..+++.+| +.+++++|+ +.+++.|++ ..++|+++.+|+.+. . ..|
T Consensus 62 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (225)
T 3tr6_A 62 LMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQY 141 (225)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCE
T ss_pred hhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCc
Confidence 34567999999999999999999998 789999999 888888876 346799999998652 1 459
Q ss_pred cEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecC
Q 021867 257 DAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRE 301 (306)
Q Consensus 257 D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~ 301 (306)
|+|++.. +.+....+++++++.|+| ||.+++.+...+
T Consensus 142 D~v~~~~-----~~~~~~~~l~~~~~~L~p---gG~lv~~~~~~~ 178 (225)
T 3tr6_A 142 DLIYIDA-----DKANTDLYYEESLKLLRE---GGLIAVDNVLRR 178 (225)
T ss_dssp EEEEECS-----CGGGHHHHHHHHHHHEEE---EEEEEEECSSGG
T ss_pred cEEEECC-----CHHHHHHHHHHHHHhcCC---CcEEEEeCCCcC
Confidence 9998544 234456789999999999 899888777654
No 138
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.14 E-value=5.1e-11 Score=105.56 Aligned_cols=99 Identities=16% Similarity=0.190 Sum_probs=74.4
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-cCC---------------------------------
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-DLA--------------------------------- 240 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-~~~--------------------------------- 240 (306)
...+|||||||+|.+. .++...+..+++++|+ +.+++.|++ ...
T Consensus 71 ~~~~vLDiGcG~G~~~-~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQ-LLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGG-GTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHH-HHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 5679999999999944 4444445569999999 888887664 110
Q ss_pred -CeEEEeccCCC--C-----CC--CccEEEehhhhccCCch--HHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 241 -NLKYVGGDMFE--A-----IP--PADAVLLKWILHDWNDE--ECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 241 -rv~~~~~d~~~--~-----~p--~~D~~~~~~vlh~~~d~--~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
.++++.+|+.+ | .+ .||+|++..+||+.+++ +...+|++++++|+| ||+|++.+.
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~Lkp---GG~l~~~~~ 216 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRP---GGHLLLIGA 216 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEE---EEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCC---CCEEEEEEe
Confidence 15567778876 2 22 29999999999985432 567899999999999 899999764
No 139
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.13 E-value=6.9e-11 Score=101.93 Aligned_cols=94 Identities=22% Similarity=0.309 Sum_probs=78.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCC-CC----C-CccEEEeh
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFE-AI----P-PADAVLLK 262 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~-~~----p-~~D~~~~~ 262 (306)
....+|||||||+|..+..++...|+.+++++|+ +.+++.+++ ..++|+++.+|+.+ +. + .||+|++.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 4678999999999999999999999999999999 788888776 34579999999866 42 2 59999987
Q ss_pred hhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 263 WILHDWNDEECVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 263 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
.+ .+ ...+++.+++.|+| ||++++.+
T Consensus 149 ~~----~~--~~~~l~~~~~~Lkp---gG~l~~~~ 174 (240)
T 1xdz_A 149 AV----AR--LSVLSELCLPLVKK---NGLFVALK 174 (240)
T ss_dssp CC----SC--HHHHHHHHGGGEEE---EEEEEEEE
T ss_pred cc----CC--HHHHHHHHHHhcCC---CCEEEEEe
Confidence 63 33 35789999999999 89998875
No 140
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.13 E-value=2.7e-10 Score=100.92 Aligned_cols=95 Identities=18% Similarity=0.226 Sum_probs=76.3
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCCCCC-Cc---cEEEeh--
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFEAIP-PA---DAVLLK-- 262 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~~~p-~~---D~~~~~-- 262 (306)
...+|||+|||+|.++..+++. |+.+++++|+ +.+++.|++ ..++|+|+.+|++++.+ .| |+|+++
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~~~f~~~D~IvsnPP 201 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPP 201 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGGGTTTCCEEEECCC
T ss_pred CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcccccCCCCEEEEcCC
Confidence 4579999999999999999999 9999999999 888888886 34579999999998654 58 999986
Q ss_pred ----------hhhccCCc------hHHHHHHHHHH-HhcCCCCCCcEEEE
Q 021867 263 ----------WILHDWND------EECVKILKKCK-EAVTSDDKKGKVII 295 (306)
Q Consensus 263 ----------~vlh~~~d------~~~~~iL~~~~-~~L~p~~~gg~lli 295 (306)
.+. +.+. ++...+++++. +.++| ||++++
T Consensus 202 yi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~p---gG~l~~ 247 (284)
T 1nv8_A 202 YVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTS---GKIVLM 247 (284)
T ss_dssp CBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCT---TCEEEE
T ss_pred CCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCC---CCEEEE
Confidence 233 1221 11237899999 99999 888876
No 141
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.12 E-value=1.6e-10 Score=99.29 Aligned_cols=100 Identities=19% Similarity=0.271 Sum_probs=80.5
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCCCCC---
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFEAIP--- 254 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~~~p--- 254 (306)
..+++.+. .....+|||||||+|.++..+++..+ .+++++|+ +.+++.|++ ..+++++..+|+..+++
T Consensus 81 ~~~~~~l~--~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (235)
T 1jg1_A 81 AIMLEIAN--LKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKA 157 (235)
T ss_dssp HHHHHHHT--CCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGC
T ss_pred HHHHHhcC--CCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCCC
Confidence 34444444 45677999999999999999999988 89999997 888888876 23569999999855554
Q ss_pred CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 255 PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 255 ~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
.||+|++..+++++++ ++.+.|+| ||++++.-
T Consensus 158 ~fD~Ii~~~~~~~~~~--------~~~~~L~p---gG~lvi~~ 189 (235)
T 1jg1_A 158 PYDVIIVTAGAPKIPE--------PLIEQLKI---GGKLIIPV 189 (235)
T ss_dssp CEEEEEECSBBSSCCH--------HHHHTEEE---EEEEEEEE
T ss_pred CccEEEECCcHHHHHH--------HHHHhcCC---CcEEEEEE
Confidence 3899999999998775 56788999 88888754
No 142
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.12 E-value=1.6e-10 Score=103.46 Aligned_cols=98 Identities=15% Similarity=0.234 Sum_probs=79.2
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCC---CCC--CccEEEehhhh
Q 021867 197 LNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFE---AIP--PADAVLLKWIL 265 (306)
Q Consensus 197 ~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~---~~p--~~D~~~~~~vl 265 (306)
+.+|||||||.|.++..+++.+|+.+++++|+ +.+++.|++ ..+|++++.+|.++ ..+ .||+|++....
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 34999999999999999999999999999999 899999987 25799999999876 233 59999986555
Q ss_pred ccCCchH--HHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 266 HDWNDEE--CVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 266 h~~~d~~--~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
+...... ...+++.+++.|+| ||.+++.-
T Consensus 170 ~~~~~~~L~t~efl~~~~r~Lkp---gGvlv~~~ 200 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAP---GGLYVANC 200 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEE---EEEEEEEE
T ss_pred ccccchhhhHHHHHHHHHHhcCC---CcEEEEEe
Confidence 4332221 15789999999999 78877654
No 143
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.12 E-value=3.3e-11 Score=105.51 Aligned_cols=101 Identities=19% Similarity=0.144 Sum_probs=76.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh---c-------------------------------C
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES---D-------------------------------L 239 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~---~-------------------------------~ 239 (306)
....+|||||||+|.++..++...- .+++++|+ +.+++.|++ . .
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~-~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSF-QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhh-cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 3567899999999987766554432 26999999 888887764 0 0
Q ss_pred CCeE-EEeccCCCC-------CCCccEEEehhhhccC-Cc-hHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 240 ANLK-YVGGDMFEA-------IPPADAVLLKWILHDW-ND-EECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 240 ~rv~-~~~~d~~~~-------~p~~D~~~~~~vlh~~-~d-~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
.+|+ ++.+|+.++ .+.||+|+++.+||+. ++ ++...+|++++++||| ||++++.+..
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKP---GG~li~~~~~ 199 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKP---GGHLVTTVTL 199 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEE---EEEEEEEEES
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCC---CcEEEEEEee
Confidence 1244 889999873 2259999999999974 32 5567899999999999 9999998653
No 144
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.12 E-value=2.1e-10 Score=93.76 Aligned_cols=93 Identities=15% Similarity=0.219 Sum_probs=76.7
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCCCCC--CccEEEehhhh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFEAIP--PADAVLLKWIL 265 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~~~p--~~D~~~~~~vl 265 (306)
.....+|||+|||+|.++..+++ +..+++++|. +.+++.+++ ..+++++..+|+.++.+ .||+|++..+
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~~- 109 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDKLEFNKAFIGGT- 109 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGGCCCSEEEECSC-
T ss_pred CCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccCCCCcEEEECCc-
Confidence 45667999999999999999998 7889999999 888888876 23689999999987544 5999999988
Q ss_pred ccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 266 HDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 266 h~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
.....+++++++. | ||++++.+..
T Consensus 110 -----~~~~~~l~~~~~~--~---gG~l~~~~~~ 133 (183)
T 2yxd_A 110 -----KNIEKIIEILDKK--K---INHIVANTIV 133 (183)
T ss_dssp -----SCHHHHHHHHHHT--T---CCEEEEEESC
T ss_pred -----ccHHHHHHHHhhC--C---CCEEEEEecc
Confidence 2235789999888 7 8999988743
No 145
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.12 E-value=1.7e-10 Score=99.48 Aligned_cols=98 Identities=12% Similarity=0.228 Sum_probs=74.6
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----------cCCCeEEEeccCCC--C--CC--Cc
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----------DLANLKYVGGDMFE--A--IP--PA 256 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----------~~~rv~~~~~d~~~--~--~p--~~ 256 (306)
....+|||||||+|.++..+++.+|+.+++++|+ +.+++.|++ ...+|+++.+|+.+ + ++ .+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 4567899999999999999999999999999999 778776653 24689999999986 3 33 48
Q ss_pred cEEEehhhhccCCch---H----HHHHHHHHHHhcCCCCCCcEEEEE
Q 021867 257 DAVLLKWILHDWNDE---E----CVKILKKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 257 D~~~~~~vlh~~~d~---~----~~~iL~~~~~~L~p~~~gg~lli~ 296 (306)
|.|++...-. |... . ...+|++++++|+| ||+|++.
T Consensus 125 D~v~~~~~dp-~~k~~h~krr~~~~~~l~~~~~~Lkp---GG~l~~~ 167 (235)
T 3ckk_A 125 TKMFFLFPDP-HFKRTKHKWRIISPTLLAEYAYVLRV---GGLVYTI 167 (235)
T ss_dssp EEEEEESCC------------CCCHHHHHHHHHHEEE---EEEEEEE
T ss_pred eEEEEeCCCc-hhhhhhhhhhhhhHHHHHHHHHHCCC---CCEEEEE
Confidence 9988654322 2210 0 03689999999999 8988875
No 146
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.12 E-value=9.2e-11 Score=101.76 Aligned_cols=105 Identities=18% Similarity=0.212 Sum_probs=85.3
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHH-CCCCeEEEecc-hHHHHhchh----c--CCCeEEEeccCCC-CCC
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKA-FPNLECTDFDL-PHVVNGLES----D--LANLKYVGGDMFE-AIP 254 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~Dl-~~~~~~a~~----~--~~rv~~~~~d~~~-~~p 254 (306)
..++..++ .....+|||+|||+|.++..+++. .|..+++++|. +.+++.+++ . .+++++..+|+.+ +++
T Consensus 86 ~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~ 163 (258)
T 2pwy_A 86 SAMVTLLD--LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELE 163 (258)
T ss_dssp HHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCC
T ss_pred HHHHHHcC--CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC
Confidence 34555555 567789999999999999999998 78899999998 888888876 1 3789999999988 365
Q ss_pred --CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 255 --PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 255 --~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
.+|+|++ ++++. ..+|+++.++|+| ||++++.+...
T Consensus 164 ~~~~D~v~~-----~~~~~--~~~l~~~~~~L~~---gG~l~~~~~~~ 201 (258)
T 2pwy_A 164 EAAYDGVAL-----DLMEP--WKVLEKAALALKP---DRFLVAYLPNI 201 (258)
T ss_dssp TTCEEEEEE-----ESSCG--GGGHHHHHHHEEE---EEEEEEEESCH
T ss_pred CCCcCEEEE-----CCcCH--HHHHHHHHHhCCC---CCEEEEEeCCH
Confidence 4999997 35554 3679999999999 89999987643
No 147
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.11 E-value=2.5e-10 Score=99.84 Aligned_cols=100 Identities=16% Similarity=0.229 Sum_probs=78.2
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-cC--------CCeEEEeccCCCC--------CC-
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-DL--------ANLKYVGGDMFEA--------IP- 254 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-~~--------~rv~~~~~d~~~~--------~p- 254 (306)
.....+|||+|||+|.++..+++++|..+++++|+ +.+++.|++ .. ++++++.+|+.+. ++
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 34567999999999999999999999999999999 888888876 21 3699999999874 23
Q ss_pred -CccEEEehhhhcc----------------CCchHHHHHHHHHHHhcCCCCCCcEEEEE
Q 021867 255 -PADAVLLKWILHD----------------WNDEECVKILKKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 255 -~~D~~~~~~vlh~----------------~~d~~~~~iL~~~~~~L~p~~~gg~lli~ 296 (306)
.||+|++.-..+. ........+++.+.+.|+| ||+++++
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~ 169 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVS---GGQLSLI 169 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEE---EEEEEEE
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCC---CCEEEEE
Confidence 5999999733321 1122246789999999999 8998875
No 148
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.11 E-value=2.5e-10 Score=97.33 Aligned_cols=95 Identities=8% Similarity=0.019 Sum_probs=79.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCCCCC---CccEEEehhh
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFEAIP---PADAVLLKWI 264 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~~~p---~~D~~~~~~v 264 (306)
.+..+|+|||||+|.++..+++.+|..+++++|+ +..++.|++ ..++|++..+|.+++++ .||+|++..+
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG~ 93 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAGM 93 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcCC
Confidence 4567999999999999999999999999999999 888888876 45789999999998665 4999987654
Q ss_pred hccCCchHHHHHHHHHHHhcCCCCCCcEEEEE
Q 021867 265 LHDWNDEECVKILKKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 265 lh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~ 296 (306)
. .+-...||..+.+.|++ +|++++.
T Consensus 94 G----g~~i~~Il~~~~~~L~~---~~~lVlq 118 (225)
T 3kr9_A 94 G----GRLIARILEEGLGKLAN---VERLILQ 118 (225)
T ss_dssp C----HHHHHHHHHHTGGGCTT---CCEEEEE
T ss_pred C----hHHHHHHHHHHHHHhCC---CCEEEEE
Confidence 2 34457899999999998 7887763
No 149
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.11 E-value=2.1e-10 Score=94.46 Aligned_cols=96 Identities=24% Similarity=0.314 Sum_probs=79.6
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCCCC---CCccEEEehh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFEAI---PPADAVLLKW 263 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~~~---p~~D~~~~~~ 263 (306)
.....+|||+|||+|.++..+++.. .+++++|. +.+++.+++ ..+++++..+|+.++. +.||+|++..
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 108 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVGG 108 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEESC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCCCEEEECC
Confidence 4567899999999999999999887 78999999 888888776 2278999999987632 4699999998
Q ss_pred hhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 264 ILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 264 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
++|++ ..+++++.+.|+| ||++++....
T Consensus 109 ~~~~~-----~~~l~~~~~~l~~---gG~l~~~~~~ 136 (192)
T 1l3i_A 109 SGGEL-----QEILRIIKDKLKP---GGRIIVTAIL 136 (192)
T ss_dssp CTTCH-----HHHHHHHHHTEEE---EEEEEEEECB
T ss_pred chHHH-----HHHHHHHHHhcCC---CcEEEEEecC
Confidence 87643 5789999999999 8999887653
No 150
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.10 E-value=1.2e-10 Score=101.31 Aligned_cols=95 Identities=16% Similarity=0.127 Sum_probs=78.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCC-CC-----CCccEEEeh
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFE-AI-----PPADAVLLK 262 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~-~~-----p~~D~~~~~ 262 (306)
....+|||||||+|..+..++..+|+.+++++|. +.+++.+++ ..++|+++.+|+.+ +. ..||+|+++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 4568999999999999999999999999999998 888888776 34569999999876 32 259999987
Q ss_pred hhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 263 WILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 263 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
.+ .+ ...+++.+.+.|+| ||++++...
T Consensus 159 a~----~~--~~~ll~~~~~~Lkp---gG~l~~~~g 185 (249)
T 3g89_A 159 AV----AP--LCVLSELLLPFLEV---GGAAVAMKG 185 (249)
T ss_dssp SS----CC--HHHHHHHHGGGEEE---EEEEEEEEC
T ss_pred Cc----CC--HHHHHHHHHHHcCC---CeEEEEEeC
Confidence 54 22 24789999999999 899988654
No 151
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.10 E-value=3.8e-10 Score=96.32 Aligned_cols=100 Identities=18% Similarity=0.171 Sum_probs=80.3
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh---cCCCeEEEeccCCCCCC---Cc
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES---DLANLKYVGGDMFEAIP---PA 256 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~---~~~rv~~~~~d~~~~~p---~~ 256 (306)
..+++.+. .....+|||||||+|.++..+++.. .+++++|+ +.+++.+++ ...+++++.+|+.+..+ .|
T Consensus 60 ~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~f 135 (231)
T 1vbf_A 60 IFMLDELD--LHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPY 135 (231)
T ss_dssp HHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCE
T ss_pred HHHHHhcC--CCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCc
Confidence 33444444 4567899999999999999999986 68999998 888888887 12289999999987332 59
Q ss_pred cEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 257 DAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 257 D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
|+|++..++|++++ ++.+.|+| ||++++...
T Consensus 136 D~v~~~~~~~~~~~--------~~~~~L~p---gG~l~~~~~ 166 (231)
T 1vbf_A 136 DRVVVWATAPTLLC--------KPYEQLKE---GGIMILPIG 166 (231)
T ss_dssp EEEEESSBBSSCCH--------HHHHTEEE---EEEEEEEEC
T ss_pred cEEEECCcHHHHHH--------HHHHHcCC---CcEEEEEEc
Confidence 99999999998874 47788999 899988754
No 152
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.10 E-value=6.5e-10 Score=100.96 Aligned_cols=97 Identities=18% Similarity=0.220 Sum_probs=76.8
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchh------cCCCeEEEeccCCC-CCC--CccEEEehhh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLES------DLANLKYVGGDMFE-AIP--PADAVLLKWI 264 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~------~~~rv~~~~~d~~~-~~p--~~D~~~~~~v 264 (306)
..+..+|||||||+|.++..+++. +..+++++|..++++.|++ ..++|+++.+|+.+ +.| .+|+|++..+
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWM 140 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCC
T ss_pred hcCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCc
Confidence 456789999999999999999887 4568999999668888876 24799999999988 565 5999998764
Q ss_pred hccC-CchHHHHHHHHHHHhcCCCCCCcEEE
Q 021867 265 LHDW-NDEECVKILKKCKEAVTSDDKKGKVI 294 (306)
Q Consensus 265 lh~~-~d~~~~~iL~~~~~~L~p~~~gg~ll 294 (306)
.+.+ .......+|+++++.|+| ||+++
T Consensus 141 ~~~l~~~~~~~~~l~~~~~~Lkp---gG~li 168 (340)
T 2fyt_A 141 GYFLLFESMLDSVLYAKNKYLAK---GGSVY 168 (340)
T ss_dssp BTTBTTTCHHHHHHHHHHHHEEE---EEEEE
T ss_pred hhhccCHHHHHHHHHHHHhhcCC---CcEEE
Confidence 3222 123345789999999999 88876
No 153
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.09 E-value=2.8e-10 Score=97.10 Aligned_cols=100 Identities=18% Similarity=0.205 Sum_probs=77.8
Q ss_pred hcCCCeEEEecCC-ccHHHHHHHHHCCCCeEEEecc-hHHHHhchh----cCCCeEEEeccCC--CCCC--CccEEEehh
Q 021867 194 FEGLNSLVDVGGG-IGTVAKAIAKAFPNLECTDFDL-PHVVNGLES----DLANLKYVGGDMF--EAIP--PADAVLLKW 263 (306)
Q Consensus 194 ~~~~~~vlDvGgG-~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~----~~~rv~~~~~d~~--~~~p--~~D~~~~~~ 263 (306)
.....+|||+||| +|.++..+++.+ ..+++++|+ +.+++.|++ ..-+++++.+|+. .+.+ .||+|++.-
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~np 131 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAP 131 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECC
Confidence 4567899999999 999999999987 678999999 888888876 2228999999963 3444 599999887
Q ss_pred hhccCCchH-----------------HHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 264 ILHDWNDEE-----------------CVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 264 vlh~~~d~~-----------------~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
.+|..++.. ...+++++.+.|+| ||+++++-
T Consensus 132 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~ 179 (230)
T 3evz_A 132 PYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNP---GGKVALYL 179 (230)
T ss_dssp CCC---------------CCSSSCHHHHHHHHHHGGGEEE---EEEEEEEE
T ss_pred CCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCC---CeEEEEEe
Confidence 766544321 26789999999999 89998864
No 154
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.09 E-value=1e-10 Score=98.76 Aligned_cols=86 Identities=16% Similarity=0.212 Sum_probs=70.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchhcCCCeEEEeccCCC-CCC--CccEEEehhhhccCCch
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLKYVGGDMFE-AIP--PADAVLLKWILHDWNDE 271 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~~~~rv~~~~~d~~~-~~p--~~D~~~~~~vlh~~~d~ 271 (306)
....+|||||||+|.++..++ .+++++|+.+. ++++..+|+.+ +.+ .||+|++..++| +.+
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~---------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~-~~~- 129 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR-----NPVHCFDLASL---------DPRVTVCDMAQVPLEDESVDVAVFCLSLM-GTN- 129 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS---------STTEEESCTTSCSCCTTCEEEEEEESCCC-SSC-
T ss_pred CCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC---------CceEEEeccccCCCCCCCEeEEEEehhcc-ccC-
Confidence 456799999999999988873 57999997432 67889999988 554 499999999998 444
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 272 ECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 272 ~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
...+|++++++|+| ||++++.+...
T Consensus 130 -~~~~l~~~~~~L~~---gG~l~i~~~~~ 154 (215)
T 2zfu_A 130 -IRDFLEEANRVLKP---GGLLKVAEVSS 154 (215)
T ss_dssp -HHHHHHHHHHHEEE---EEEEEEEECGG
T ss_pred -HHHHHHHHHHhCCC---CeEEEEEEcCC
Confidence 36889999999999 89999988653
No 155
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.09 E-value=4.2e-11 Score=111.69 Aligned_cols=107 Identities=13% Similarity=0.108 Sum_probs=81.1
Q ss_pred hHHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhcCCCeEEEeccCC-----C-CC-
Q 021867 182 ATRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESDLANLKYVGGDMF-----E-AI- 253 (306)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~-----~-~~- 253 (306)
.+..+++.+. .....+|||||||+|.++..++++. .+++++|+ +.+++.|++. .+......+. . +.
T Consensus 95 ~~~~l~~~~~--~~~~~~VLDiGcG~G~~~~~l~~~g--~~v~gvD~s~~~~~~a~~~--~~~~~~~~~~~~~~~~l~~~ 168 (416)
T 4e2x_A 95 LARDFLATEL--TGPDPFIVEIGCNDGIMLRTIQEAG--VRHLGFEPSSGVAAKAREK--GIRVRTDFFEKATADDVRRT 168 (416)
T ss_dssp HHHHHHHTTT--CSSSCEEEEETCTTTTTHHHHHHTT--CEEEEECCCHHHHHHHHTT--TCCEECSCCSHHHHHHHHHH
T ss_pred HHHHHHHHhC--CCCCCEEEEecCCCCHHHHHHHHcC--CcEEEECCCHHHHHHHHHc--CCCcceeeechhhHhhcccC
Confidence 4455666665 5667899999999999999999874 48999999 7888888852 2333322221 1 22
Q ss_pred -CCccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 254 -PPADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 254 -p~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
..||+|++.++||++++. ..+|++++++|+| ||++++....
T Consensus 169 ~~~fD~I~~~~vl~h~~d~--~~~l~~~~r~Lkp---gG~l~i~~~~ 210 (416)
T 4e2x_A 169 EGPANVIYAANTLCHIPYV--QSVLEGVDALLAP---DGVFVFEDPY 210 (416)
T ss_dssp HCCEEEEEEESCGGGCTTH--HHHHHHHHHHEEE---EEEEEEEEEC
T ss_pred CCCEEEEEECChHHhcCCH--HHHHHHHHHHcCC---CeEEEEEeCC
Confidence 259999999999999875 5789999999999 8999886543
No 156
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.08 E-value=3.7e-10 Score=96.81 Aligned_cols=95 Identities=12% Similarity=0.131 Sum_probs=73.5
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHC-CCCeEEEecc-hHHHHhchh---cCCCeEEEeccCCCC--CC----CccEEEeh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAF-PNLECTDFDL-PHVVNGLES---DLANLKYVGGDMFEA--IP----PADAVLLK 262 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-~~~~~~a~~---~~~rv~~~~~d~~~~--~p----~~D~~~~~ 262 (306)
+....+|||+|||+|.++..+++.+ |..+++++|+ +.+++.+.+ ...+++++.+|+.++ .+ .||+|++.
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~ 154 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFAD 154 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEEC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEc
Confidence 4567899999999999999999986 7789999999 554443332 348899999999873 22 58999985
Q ss_pred hhhccCCchHHHHHHHHHHHhcCCCCCCcEEEE
Q 021867 263 WILHDWNDEECVKILKKCKEAVTSDDKKGKVII 295 (306)
Q Consensus 263 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli 295 (306)
.. ..+....+++++++.|+| ||++++
T Consensus 155 ~~----~~~~~~~~~~~~~~~Lkp---gG~l~i 180 (233)
T 2ipx_A 155 VA----QPDQTRIVALNAHTFLRN---GGHFVI 180 (233)
T ss_dssp CC----CTTHHHHHHHHHHHHEEE---EEEEEE
T ss_pred CC----CccHHHHHHHHHHHHcCC---CeEEEE
Confidence 43 233445679999999999 888887
No 157
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.08 E-value=4e-10 Score=98.50 Aligned_cols=94 Identities=16% Similarity=0.249 Sum_probs=79.6
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhcCCCeEEEeccCCC-CCC--CccEEEehhhhccCCc
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESDLANLKYVGGDMFE-AIP--PADAVLLKWILHDWND 270 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~-~~p--~~D~~~~~~vlh~~~d 270 (306)
....+|||||||+|.++..+++.+|..+++++|+ +.+++.|++...++.+..+|+.+ +.+ .||+|++..+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~----- 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP----- 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC-----
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh-----
Confidence 4567999999999999999999998899999999 88888888766789999999987 544 59999986542
Q ss_pred hHHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 271 EECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 271 ~~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
..+++++++|+| ||++++++...
T Consensus 159 ----~~l~~~~~~L~p---gG~l~~~~~~~ 181 (269)
T 1p91_A 159 ----CKAEELARVVKP---GGWVITATPGP 181 (269)
T ss_dssp ----CCHHHHHHHEEE---EEEEEEEEECT
T ss_pred ----hhHHHHHHhcCC---CcEEEEEEcCH
Confidence 248999999999 89999987643
No 158
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.08 E-value=5.4e-10 Score=103.00 Aligned_cols=97 Identities=13% Similarity=0.165 Sum_probs=81.3
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh----cCCCeEEEeccCCC-CCC--CccEEEehhhhcc
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES----DLANLKYVGGDMFE-AIP--PADAVLLKWILHD 267 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~----~~~rv~~~~~d~~~-~~p--~~D~~~~~~vlh~ 267 (306)
...+|||+|||+|.++..+++. +.+++++|. +.+++.+++ ..-.++++.+|+.+ +.+ .||+|++..++|.
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHV 310 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCT
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhh
Confidence 5679999999999999999987 468999999 888888876 23359999999998 343 5999999999986
Q ss_pred ---CCchHHHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 268 ---WNDEECVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 268 ---~~d~~~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
...+....+++++++.|+| ||+++|+.
T Consensus 311 ~~~~~~~~~~~~l~~~~~~Lkp---GG~l~iv~ 340 (381)
T 3dmg_A 311 GGAVILDVAQAFVNVAAARLRP---GGVFFLVS 340 (381)
T ss_dssp TCSSCCHHHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred cccccHHHHHHHHHHHHHhcCc---CcEEEEEE
Confidence 3356667899999999999 89998864
No 159
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.08 E-value=1.1e-10 Score=101.06 Aligned_cols=100 Identities=15% Similarity=0.206 Sum_probs=80.1
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCC-CCeEEEecc-hHHHHhchh------cCCCeEEEeccCCC--C-C------CCc
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFP-NLECTDFDL-PHVVNGLES------DLANLKYVGGDMFE--A-I------PPA 256 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~--~-~------p~~ 256 (306)
..++.+|||||||+|..+..+++..| +.+++++|+ +.+++.|++ ..++|+++.+|+.+ + . ..|
T Consensus 58 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~f 137 (242)
T 3r3h_A 58 LTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQF 137 (242)
T ss_dssp HHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCE
T ss_pred hcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCE
Confidence 34578999999999999999999987 789999999 777777765 35799999999876 2 2 359
Q ss_pred cEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecC
Q 021867 257 DAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRE 301 (306)
Q Consensus 257 D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~ 301 (306)
|+|++... .+....+++++.+.|+| ||.|++.+....
T Consensus 138 D~V~~d~~-----~~~~~~~l~~~~~~Lkp---GG~lv~d~~~~~ 174 (242)
T 3r3h_A 138 DFIFIDAD-----KTNYLNYYELALKLVTP---KGLIAIDNIFWD 174 (242)
T ss_dssp EEEEEESC-----GGGHHHHHHHHHHHEEE---EEEEEEECSSSS
T ss_pred eEEEEcCC-----hHHhHHHHHHHHHhcCC---CeEEEEECCccC
Confidence 99988643 33446789999999999 888888766543
No 160
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.07 E-value=2.9e-10 Score=104.71 Aligned_cols=101 Identities=13% Similarity=0.140 Sum_probs=80.7
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchh------cCCCeEEEeccCCC-CCC-CccEEEehhhh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLES------DLANLKYVGGDMFE-AIP-PADAVLLKWIL 265 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~------~~~rv~~~~~d~~~-~~p-~~D~~~~~~vl 265 (306)
.....+|||||||+|.++..++++. ..+++++|...+++.|++ ..++|+++.+|+.+ +.+ .+|+|++..+.
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~~ 139 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWMG 139 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEECCCB
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEEcChh
Confidence 4567899999999999999999873 348999999888888776 45789999999988 555 59999997666
Q ss_pred ccCCc-hHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 266 HDWND-EECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 266 h~~~d-~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
|.... .....+++++++.|+| ||.+++.+.
T Consensus 140 ~~l~~e~~~~~~l~~~~~~Lkp---gG~li~~~~ 170 (376)
T 3r0q_C 140 YFLLRESMFDSVISARDRWLKP---TGVMYPSHA 170 (376)
T ss_dssp TTBTTTCTHHHHHHHHHHHEEE---EEEEESSEE
T ss_pred hcccchHHHHHHHHHHHhhCCC---CeEEEEecC
Confidence 65442 3345789999999999 888876554
No 161
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.07 E-value=5e-10 Score=100.71 Aligned_cols=101 Identities=14% Similarity=0.261 Sum_probs=81.6
Q ss_pred HHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCC-CCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCCCC---C
Q 021867 185 VVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFP-NLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFEAI---P 254 (306)
Q Consensus 185 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~~~---p 254 (306)
.+++.+. .....+|||||||+|.++..+++..+ +.+++++|+ +.+++.|++ ..+++++..+|+.+.. .
T Consensus 66 ~l~~~l~--~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~ 143 (317)
T 1dl5_A 66 LFMEWVG--LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFS 143 (317)
T ss_dssp HHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGC
T ss_pred HHHHhcC--CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCC
Confidence 3444444 45678999999999999999999988 478999999 888888876 2456999999998732 2
Q ss_pred CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 255 PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 255 ~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
.||+|++..++|+.+ +++.+.|+| ||++++...
T Consensus 144 ~fD~Iv~~~~~~~~~--------~~~~~~Lkp---gG~lvi~~~ 176 (317)
T 1dl5_A 144 PYDVIFVTVGVDEVP--------ETWFTQLKE---GGRVIVPIN 176 (317)
T ss_dssp CEEEEEECSBBSCCC--------HHHHHHEEE---EEEEEEEBC
T ss_pred CeEEEEEcCCHHHHH--------HHHHHhcCC---CcEEEEEEC
Confidence 599999999999877 456778999 899988753
No 162
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.07 E-value=1.8e-10 Score=97.12 Aligned_cols=98 Identities=15% Similarity=0.186 Sum_probs=78.4
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCC-CCeEEEecc-hHHHHhchh------cCCCeEEEeccCCC--CC-CCccEEEehh
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFP-NLECTDFDL-PHVVNGLES------DLANLKYVGGDMFE--AI-PPADAVLLKW 263 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~--~~-p~~D~~~~~~ 263 (306)
.+..+|||||||+|..+..+++.+| +.+++++|+ +.+++.|++ ..++|+++.+|..+ +. ++||+|++..
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 134 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRDIDILFMDC 134 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCSEEEEEEET
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCCCCEEEEcC
Confidence 4567999999999999999999988 789999999 888888876 34689999999865 22 2399998763
Q ss_pred hhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 264 ILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 264 vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
. ......+++++++.|+| ||.+++.+...
T Consensus 135 ~-----~~~~~~~l~~~~~~Lkp---gG~lv~~~~~~ 163 (210)
T 3c3p_A 135 D-----VFNGADVLERMNRCLAK---NALLIAVNALR 163 (210)
T ss_dssp T-----TSCHHHHHHHHGGGEEE---EEEEEEESSSS
T ss_pred C-----hhhhHHHHHHHHHhcCC---CeEEEEECccc
Confidence 2 22346789999999999 88888766543
No 163
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.07 E-value=2.1e-10 Score=102.06 Aligned_cols=100 Identities=15% Similarity=0.169 Sum_probs=75.8
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh----c------CCCeEEEeccCCCCC---C-CccEE
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES----D------LANLKYVGGDMFEAI---P-PADAV 259 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~----~------~~rv~~~~~d~~~~~---p-~~D~~ 259 (306)
.++.+|||||||+|..+..+++..|..+++++|+ +.+++.|++ . .+|++++.+|.++.. + .||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 4578999999999999999999878889999999 889998887 1 469999999988732 2 59999
Q ss_pred EehhhhccCCchHH--HHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 260 LLKWILHDWNDEEC--VKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 260 ~~~~vlh~~~d~~~--~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
++....+.-+.... ..+++.++++|+| ||.+++.-
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~Lkp---gG~lv~~~ 198 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNP---GGIFVAQN 198 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEE---EEEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCC---CCEEEEec
Confidence 99554433222221 5789999999999 88887753
No 164
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.07 E-value=2.5e-10 Score=102.11 Aligned_cols=100 Identities=14% Similarity=0.111 Sum_probs=77.4
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh---------cCCCeEEEeccCCC-C---CC-CccEE
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES---------DLANLKYVGGDMFE-A---IP-PADAV 259 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~---------~~~rv~~~~~d~~~-~---~p-~~D~~ 259 (306)
..+.+|||||||+|.++..+++..|..+++++|+ +.+++.+++ ..+|++++.+|+.+ + .+ .||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 4568999999999999999998878889999999 888888876 14789999999876 2 12 59999
Q ss_pred EehhhhccCCchHH--HHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 260 LLKWILHDWNDEEC--VKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 260 ~~~~vlh~~~d~~~--~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
++....+.++.... ..++++++++|+| ||++++..
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~~ 210 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKP---DGICCNQG 210 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEE---EEEEEEEE
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCC---CcEEEEec
Confidence 99777766554322 4789999999999 89888863
No 165
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.06 E-value=1e-09 Score=93.48 Aligned_cols=96 Identities=15% Similarity=0.187 Sum_probs=75.0
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHC-CCCeEEEecc-hHHHHhchh---cCCCeEEEeccCCCC-----CC-CccEEEeh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAF-PNLECTDFDL-PHVVNGLES---DLANLKYVGGDMFEA-----IP-PADAVLLK 262 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-~~~~~~a~~---~~~rv~~~~~d~~~~-----~p-~~D~~~~~ 262 (306)
.....+|||+|||+|.++..+++.. |..+++++|. +.+++.+.+ ..++++++.+|+.++ .+ .||+|++.
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 4566799999999999999999885 6689999999 666666554 347899999999872 23 48999965
Q ss_pred hhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEE
Q 021867 263 WILHDWNDEECVKILKKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 263 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~ 296 (306)
.. ..+....+++++++.|+| ||++++.
T Consensus 151 ~~----~~~~~~~~l~~~~~~Lkp---gG~l~~~ 177 (227)
T 1g8a_A 151 VA----QPTQAKILIDNAEVYLKR---GGYGMIA 177 (227)
T ss_dssp CC----STTHHHHHHHHHHHHEEE---EEEEEEE
T ss_pred CC----CHhHHHHHHHHHHHhcCC---CCEEEEE
Confidence 43 222334559999999999 8999887
No 166
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.06 E-value=6.1e-10 Score=96.59 Aligned_cols=98 Identities=12% Similarity=0.088 Sum_probs=79.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCC-CCeEEEecc-hHHHHhchh------cCCCeEEEeccCCC--C-C-------CCc
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFP-NLECTDFDL-PHVVNGLES------DLANLKYVGGDMFE--A-I-------PPA 256 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~--~-~-------p~~ 256 (306)
.++.+|||||||+|..+..+++.+| +.+++++|+ +.+++.|++ ..++|+++.+|..+ + . ..|
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 4568999999999999999999988 789999999 888888876 34689999999865 2 1 359
Q ss_pred cEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 257 DAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 257 D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
|+|++... ......+++.+.+.|+| ||.|++.+...
T Consensus 158 D~V~~d~~-----~~~~~~~l~~~~~~Lkp---GG~lv~d~~~~ 193 (247)
T 1sui_A 158 DFIFVDAD-----KDNYLNYHKRLIDLVKV---GGVIGYDNTLW 193 (247)
T ss_dssp SEEEECSC-----STTHHHHHHHHHHHBCT---TCCEEEECTTG
T ss_pred EEEEEcCc-----hHHHHHHHHHHHHhCCC---CeEEEEecCCc
Confidence 99998642 23346789999999999 89888766443
No 167
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.06 E-value=5.4e-10 Score=97.43 Aligned_cols=99 Identities=11% Similarity=0.129 Sum_probs=77.9
Q ss_pred hc-CCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCC-C--CC--CccEEE
Q 021867 194 FE-GLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFE-A--IP--PADAVL 260 (306)
Q Consensus 194 ~~-~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~-~--~p--~~D~~~ 260 (306)
.. ...+|||+|||+|.++..++++.+. +++++|+ +.+++.|++ ..++++++.+|+.+ + .+ .||+|+
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEE
Confidence 44 6789999999999999999999876 9999999 888888876 35689999999987 2 32 599999
Q ss_pred ehhhhccC------------------CchHHHHHHHHHHHhcCCCCCCcEEEEE
Q 021867 261 LKWILHDW------------------NDEECVKILKKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 261 ~~~vlh~~------------------~d~~~~~iL~~~~~~L~p~~~gg~lli~ 296 (306)
+.-.++.. .......+++.+.+.|+| ||+++++
T Consensus 125 ~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~ 175 (259)
T 3lpm_A 125 CNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQ---GGKANFV 175 (259)
T ss_dssp ECCCC-----------------------HHHHHHHHHHHHHEEE---EEEEEEE
T ss_pred ECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccC---CcEEEEE
Confidence 96443322 112345789999999999 8999885
No 168
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.06 E-value=5.6e-10 Score=98.30 Aligned_cols=104 Identities=19% Similarity=0.254 Sum_probs=84.2
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHH-CCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCCCCC-
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKA-FPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFEAIP- 254 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~~~p- 254 (306)
..++..++ .....+|||+|||+|.++..+++. .|..+++++|. +.+++.|++ ..+++++..+|+.+.++
T Consensus 102 ~~i~~~~~--~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 179 (277)
T 1o54_A 102 SFIAMMLD--VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDE 179 (277)
T ss_dssp HHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSC
T ss_pred HHHHHHhC--CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccC
Confidence 34455555 566789999999999999999999 78899999998 888888876 12689999999988554
Q ss_pred -CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 255 -PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 255 -~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
.||+|++ +.++. ..+|+++.+.|+| ||++++.+..
T Consensus 180 ~~~D~V~~-----~~~~~--~~~l~~~~~~L~p---gG~l~~~~~~ 215 (277)
T 1o54_A 180 KDVDALFL-----DVPDP--WNYIDKCWEALKG---GGRFATVCPT 215 (277)
T ss_dssp CSEEEEEE-----CCSCG--GGTHHHHHHHEEE---EEEEEEEESS
T ss_pred CccCEEEE-----CCcCH--HHHHHHHHHHcCC---CCEEEEEeCC
Confidence 4999997 34554 3689999999999 8999988754
No 169
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.06 E-value=5.8e-10 Score=100.81 Aligned_cols=97 Identities=14% Similarity=0.225 Sum_probs=76.7
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchh------cCCCeEEEeccCCC-CCC--CccEEEehhh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLES------DLANLKYVGGDMFE-AIP--PADAVLLKWI 264 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~------~~~rv~~~~~d~~~-~~p--~~D~~~~~~v 264 (306)
..+..+|||||||+|.++..+++. +..+++++|..++++.|++ ..++|+++.+|+.+ +.| .+|+|++..+
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 114 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWM 114 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCC
T ss_pred hcCCCEEEEecCccHHHHHHHHHC-CCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCc
Confidence 345679999999999999988876 5568999999778887776 35789999999988 555 5999998765
Q ss_pred hccCC-chHHHHHHHHHHHhcCCCCCCcEEE
Q 021867 265 LHDWN-DEECVKILKKCKEAVTSDDKKGKVI 294 (306)
Q Consensus 265 lh~~~-d~~~~~iL~~~~~~L~p~~~gg~ll 294 (306)
.|.+. .+....+++++.+.|+| ||+++
T Consensus 115 ~~~l~~~~~~~~~l~~~~~~Lkp---gG~li 142 (328)
T 1g6q_1 115 GYFLLYESMMDTVLYARDHYLVE---GGLIF 142 (328)
T ss_dssp BTTBSTTCCHHHHHHHHHHHEEE---EEEEE
T ss_pred hhhcccHHHHHHHHHHHHhhcCC---CeEEE
Confidence 44432 22335789999999999 88876
No 170
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.06 E-value=2.5e-10 Score=98.82 Aligned_cols=94 Identities=18% Similarity=0.326 Sum_probs=73.6
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-------------cCCCeEEEeccCCCC----CC--
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-------------DLANLKYVGGDMFEA----IP-- 254 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-------------~~~rv~~~~~d~~~~----~p-- 254 (306)
....+|||||||+|.++..+++.+|+.+++++|+ +.+++.+++ ..++++++.+|+++. ++
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 4567999999999999999999999999999998 778777654 126899999999872 32
Q ss_pred CccEEEehhhhccCCchHH-----------HHHHHHHHHhcCCCCCCcEEEEE
Q 021867 255 PADAVLLKWILHDWNDEEC-----------VKILKKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 255 ~~D~~~~~~vlh~~~d~~~-----------~~iL~~~~~~L~p~~~gg~lli~ 296 (306)
.+|.+++. ++++.. ..+++++.+.|+| ||.|++.
T Consensus 128 ~~d~v~~~-----~p~p~~k~~~~~~r~~~~~~l~~~~~~Lkp---gG~l~~~ 172 (246)
T 2vdv_E 128 QLSKMFFC-----FPDPHFKQRKHKARIITNTLLSEYAYVLKE---GGVVYTI 172 (246)
T ss_dssp CEEEEEEE-----SCCCC------CSSCCCHHHHHHHHHHEEE---EEEEEEE
T ss_pred ccCEEEEE-----CCCcccccchhHHhhccHHHHHHHHHHcCC---CCEEEEE
Confidence 36776643 233211 3789999999999 8998885
No 171
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.05 E-value=2.7e-10 Score=97.17 Aligned_cols=94 Identities=10% Similarity=0.117 Sum_probs=76.0
Q ss_pred eEEEecCCccHHHHHHHHHCC-CCeEEEecc-hHHHHhchh------cC-CCeEEEeccCCC---CC-C-CccEEEehhh
Q 021867 199 SLVDVGGGIGTVAKAIAKAFP-NLECTDFDL-PHVVNGLES------DL-ANLKYVGGDMFE---AI-P-PADAVLLKWI 264 (306)
Q Consensus 199 ~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-~~~~~~a~~------~~-~rv~~~~~d~~~---~~-p-~~D~~~~~~v 264 (306)
+|||||||+|..+..+++.+| +.+++++|+ +.+++.|++ .. ++|+++.+|..+ .. + .||+|++...
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~~ 138 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQVS 138 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECCC
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcCc
Confidence 999999999999999999876 789999999 888888876 33 689999999866 23 2 5999987542
Q ss_pred hccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 265 LHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 265 lh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
......+++.+.+.|+| ||.+++.+...
T Consensus 139 -----~~~~~~~l~~~~~~Lkp---GG~lv~dn~~~ 166 (221)
T 3dr5_A 139 -----PMDLKALVDAAWPLLRR---GGALVLADALL 166 (221)
T ss_dssp -----TTTHHHHHHHHHHHEEE---EEEEEETTTTG
T ss_pred -----HHHHHHHHHHHHHHcCC---CcEEEEeCCCC
Confidence 23345689999999999 78877766554
No 172
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.05 E-value=2.6e-10 Score=92.41 Aligned_cols=95 Identities=13% Similarity=0.033 Sum_probs=72.9
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh----cCCCeEEEeccCCCCCC-------CccEEEehh
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES----DLANLKYVGGDMFEAIP-------PADAVLLKW 263 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~----~~~rv~~~~~d~~~~~p-------~~D~~~~~~ 263 (306)
...+|||+|||+|.++..+++..++ ++++|+ +.+++.+++ ..-+++++.+|+.+..+ .||+|++..
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~--v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE--AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE--EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 5679999999999999999998776 999999 888888876 11189999999876211 599999998
Q ss_pred hhccCCchHHHHHHHHHH--HhcCCCCCCcEEEEEeee
Q 021867 264 ILHDWNDEECVKILKKCK--EAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 264 vlh~~~d~~~~~iL~~~~--~~L~p~~~gg~lli~e~~ 299 (306)
++| ...+ .+++.+. +.|+| ||++++....
T Consensus 119 ~~~-~~~~---~~~~~~~~~~~L~~---gG~~~~~~~~ 149 (171)
T 1ws6_A 119 PYA-MDLA---ALFGELLASGLVEA---GGLYVLQHPK 149 (171)
T ss_dssp CTT-SCTT---HHHHHHHHHTCEEE---EEEEEEEEET
T ss_pred CCc-hhHH---HHHHHHHhhcccCC---CcEEEEEeCC
Confidence 877 2223 3344444 99999 7888775543
No 173
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.04 E-value=6.7e-10 Score=95.20 Aligned_cols=107 Identities=13% Similarity=0.158 Sum_probs=81.1
Q ss_pred HHHHhhchhh-hcCCCeEEEecCCccHHHHHHHHH-CCCCeEEEecc-hHHHHhchh---cCCCeEEEeccCCCC--CC-
Q 021867 184 RVVIHKCKDV-FEGLNSLVDVGGGIGTVAKAIAKA-FPNLECTDFDL-PHVVNGLES---DLANLKYVGGDMFEA--IP- 254 (306)
Q Consensus 184 ~~~~~~~~~~-~~~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~Dl-~~~~~~a~~---~~~rv~~~~~d~~~~--~p- 254 (306)
..++..++.. +....+|||+|||+|.++..+++. .|+-+++++|. +.+++.+++ ...++..+.+|...+ .+
T Consensus 64 a~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~ 143 (233)
T 4df3_A 64 AALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRH 143 (233)
T ss_dssp HHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTT
T ss_pred HHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCcccccc
Confidence 3444444321 577899999999999999999987 58889999999 888888776 456899999988763 12
Q ss_pred ---CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 255 ---PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 255 ---~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
.+|++++.... .. +...+++++++.||| ||+++|..
T Consensus 144 ~~~~vDvVf~d~~~--~~--~~~~~l~~~~r~LKp---GG~lvI~i 182 (233)
T 4df3_A 144 LVEGVDGLYADVAQ--PE--QAAIVVRNARFFLRD---GGYMLMAI 182 (233)
T ss_dssp TCCCEEEEEECCCC--TT--HHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred ccceEEEEEEeccC--Ch--hHHHHHHHHHHhccC---CCEEEEEE
Confidence 47887754322 22 335789999999999 89999864
No 174
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.04 E-value=3.6e-10 Score=97.30 Aligned_cols=100 Identities=15% Similarity=0.167 Sum_probs=79.9
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCC-CCeEEEecc-hHHHHhchh------cCCCeEEEeccCCC--C-C---------
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFP-NLECTDFDL-PHVVNGLES------DLANLKYVGGDMFE--A-I--------- 253 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~--~-~--------- 253 (306)
..+..+|||||||+|..+..+++.+| ..+++++|. +.+++.|++ ..++|++..+|+.+ + .
T Consensus 58 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 137 (239)
T 2hnk_A 58 ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSW 137 (239)
T ss_dssp HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGG
T ss_pred hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccc
Confidence 34578999999999999999999988 689999999 888888876 23569999999865 2 1
Q ss_pred --------CCccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecC
Q 021867 254 --------PPADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRE 301 (306)
Q Consensus 254 --------p~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~ 301 (306)
..||+|++... .+....+++++++.|+| ||++++.+...+
T Consensus 138 ~~~f~~~~~~fD~I~~~~~-----~~~~~~~l~~~~~~L~p---gG~lv~~~~~~~ 185 (239)
T 2hnk_A 138 ASDFAFGPSSIDLFFLDAD-----KENYPNYYPLILKLLKP---GGLLIADNVLWD 185 (239)
T ss_dssp GTTTCCSTTCEEEEEECSC-----GGGHHHHHHHHHHHEEE---EEEEEEECSSGG
T ss_pred cccccCCCCCcCEEEEeCC-----HHHHHHHHHHHHHHcCC---CeEEEEEccccC
Confidence 45999988743 33445789999999999 888888765543
No 175
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.04 E-value=6.8e-10 Score=89.95 Aligned_cols=98 Identities=12% Similarity=0.201 Sum_probs=79.3
Q ss_pred cCCCeEEEecCCccHHHHHHHHHC-CCCeEEEecchHHHHhchhcCCCeEEEeccCCC-C--------CC--CccEEEeh
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAF-PNLECTDFDLPHVVNGLESDLANLKYVGGDMFE-A--------IP--PADAVLLK 262 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl~~~~~~a~~~~~rv~~~~~d~~~-~--------~p--~~D~~~~~ 262 (306)
....+|||+|||+|.++..+++.+ |+.+++++|+.++++ .+++++..+|+.+ + .+ .||+|++.
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~ 95 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDP-----IVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSD 95 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCC-----CTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECccccc-----cCcEEEEEcccccchhhhhhhccCCCCceeEEEEC
Confidence 456799999999999999999995 778999999965321 3789999999988 4 44 59999999
Q ss_pred hhhccCCchH---------HHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 263 WILHDWNDEE---------CVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 263 ~vlh~~~d~~---------~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
.++|...+.. ...+++++.+.|+| ||++++.+...
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~---gG~l~~~~~~~ 139 (180)
T 1ej0_A 96 MAPNMSGTPAVDIPRAMYLVELALEMCRDVLAP---GGSFVVKVFQG 139 (180)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEEESS
T ss_pred CCccccCCCccchHHHHHHHHHHHHHHHHHcCC---CcEEEEEEecC
Confidence 9888665431 15789999999999 89998876543
No 176
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.04 E-value=1e-09 Score=91.57 Aligned_cols=96 Identities=14% Similarity=0.166 Sum_probs=74.8
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCC--CCeEEEecchHHHHhchhcCCCeEEEeccCCC-C------------------
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFP--NLECTDFDLPHVVNGLESDLANLKYVGGDMFE-A------------------ 252 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p--~~~~~~~Dl~~~~~~a~~~~~rv~~~~~d~~~-~------------------ 252 (306)
+....+|||||||+|.++..+++++| +.+++++|+.++ + ..+++++..+|+.+ +
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~---~--~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~ 94 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIM---D--PIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSV 94 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCC---C--CCTTCEEEECCTTTTSSCCC-----------CHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCcc---C--CCCCceEEEccccchhhhhhccccccccccchhh
Confidence 35567999999999999999999998 689999999653 1 24679999999987 3
Q ss_pred -------CC--CccEEEehhhhccCC----chH-----HHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 253 -------IP--PADAVLLKWILHDWN----DEE-----CVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 253 -------~p--~~D~~~~~~vlh~~~----d~~-----~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
++ .||+|++...+|... +.. ...+|+++++.|+| ||++++..
T Consensus 95 ~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lkp---gG~lv~~~ 154 (201)
T 2plw_A 95 DYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINI---GGTYIVKM 154 (201)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred HHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccC---CCEEEEEE
Confidence 24 589999988776431 211 12489999999999 89888743
No 177
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.02 E-value=6.2e-10 Score=94.86 Aligned_cols=99 Identities=14% Similarity=0.204 Sum_probs=79.9
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCC-CCeEEEecc-hHHHHhchh------cCCCeEEEeccCCCC---C------CCc
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFP-NLECTDFDL-PHVVNGLES------DLANLKYVGGDMFEA---I------PPA 256 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~~---~------p~~ 256 (306)
..+..+|||||||+|..+..+++.+| ..+++++|. +.+++.|++ ..++|+++.+|+.+. . ..|
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 34578999999999999999999987 789999999 888888876 347899999998652 1 459
Q ss_pred cEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 257 DAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 257 D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
|+|++... ......+++++.+.|+| ||.+++.+...
T Consensus 147 D~v~~d~~-----~~~~~~~l~~~~~~L~p---gG~lv~~~~~~ 182 (229)
T 2avd_A 147 DVAVVDAD-----KENCSAYYERCLQLLRP---GGILAVLRVLW 182 (229)
T ss_dssp EEEEECSC-----STTHHHHHHHHHHHEEE---EEEEEEECCSG
T ss_pred cEEEECCC-----HHHHHHHHHHHHHHcCC---CeEEEEECCCc
Confidence 99998432 33446789999999999 88888877653
No 178
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.02 E-value=9.6e-10 Score=93.94 Aligned_cols=96 Identities=8% Similarity=-0.039 Sum_probs=79.1
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCCCCC---CccEEEehhh
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFEAIP---PADAVLLKWI 264 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~~~p---~~D~~~~~~v 264 (306)
.+..+|+|||||+|.++..+++..|..+++++|+ +.+++.|++ ..++|++..+|.++..+ .+|+|++..+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGm 99 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGM 99 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCC
Confidence 4568999999999999999999999989999999 888888886 56789999999999543 4999987665
Q ss_pred hccCCchHHHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 265 LHDWNDEECVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 265 lh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
. -+-...||....+.|++ +|++++.-
T Consensus 100 G----g~lI~~IL~~~~~~l~~---~~~lIlqp 125 (230)
T 3lec_A 100 G----GRLIADILNNDIDKLQH---VKTLVLQP 125 (230)
T ss_dssp C----HHHHHHHHHHTGGGGTT---CCEEEEEE
T ss_pred c----hHHHHHHHHHHHHHhCc---CCEEEEEC
Confidence 4 34456788888888887 77776643
No 179
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.01 E-value=9.6e-10 Score=94.70 Aligned_cols=96 Identities=10% Similarity=0.074 Sum_probs=79.6
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCCCCC---CccEEEehhh
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFEAIP---PADAVLLKWI 264 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~~~p---~~D~~~~~~v 264 (306)
.+..+|+|||||+|.++..+++..|..+++++|+ +.+++.|++ ..++|++..+|.++..+ .||+|++..+
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviagm 99 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGM 99 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCC
Confidence 4568999999999999999999999889999999 888888876 46789999999999543 3999987654
Q ss_pred hccCCchHHHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 265 LHDWNDEECVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 265 lh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
. .+-...||....+.|++ ++++++.-
T Consensus 100 G----g~lI~~IL~~~~~~L~~---~~~lIlq~ 125 (244)
T 3gnl_A 100 G----GTLIRTILEEGAAKLAG---VTKLILQP 125 (244)
T ss_dssp C----HHHHHHHHHHTGGGGTT---CCEEEEEE
T ss_pred c----hHHHHHHHHHHHHHhCC---CCEEEEEc
Confidence 3 34567789999999988 77877653
No 180
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.01 E-value=2.1e-10 Score=97.90 Aligned_cols=87 Identities=9% Similarity=0.168 Sum_probs=73.3
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhcCCCeEEEeccCCC--CCC---CccEEEehhhhccC
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESDLANLKYVGGDMFE--AIP---PADAVLLKWILHDW 268 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~--~~p---~~D~~~~~~vlh~~ 268 (306)
....+|||||||+|.++..+++. ..+++++|+ +.+++.+++..++++++.+|+.+ |.+ .||+|++.
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~------ 118 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR------ 118 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE------
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC------
Confidence 45689999999999999999988 568999999 88999988767789999999976 433 49999987
Q ss_pred CchHHHHHHHHHHHhcCCCCCCcEEE
Q 021867 269 NDEECVKILKKCKEAVTSDDKKGKVI 294 (306)
Q Consensus 269 ~d~~~~~iL~~~~~~L~p~~~gg~ll 294 (306)
.+ ...+|+++++.|+| ||+++
T Consensus 119 ~~--~~~~l~~~~~~Lkp---gG~l~ 139 (226)
T 3m33_A 119 RG--PTSVILRLPELAAP---DAHFL 139 (226)
T ss_dssp SC--CSGGGGGHHHHEEE---EEEEE
T ss_pred CC--HHHHHHHHHHHcCC---CcEEE
Confidence 12 24679999999999 88887
No 181
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.00 E-value=7.3e-10 Score=91.10 Aligned_cols=98 Identities=13% Similarity=-0.004 Sum_probs=75.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCCC-------CCCccEEE
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFEA-------IPPADAVL 260 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~~-------~p~~D~~~ 260 (306)
....+|||+|||+|.++..+++ .+..+++++|+ +.+++.|++ ..++++++.+|+.+. ...||+|+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVS-RGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHH-cCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 3567999999999999999887 56679999999 888888876 236899999999772 22599999
Q ss_pred ehhhhccCCchHHHHHHHHH--HHhcCCCCCCcEEEEEeee
Q 021867 261 LKWILHDWNDEECVKILKKC--KEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 261 ~~~vlh~~~d~~~~~iL~~~--~~~L~p~~~gg~lli~e~~ 299 (306)
+..++|....+ .+++.+ .+.|+| ||.+++....
T Consensus 122 ~~~~~~~~~~~---~~~~~l~~~~~L~~---gG~l~~~~~~ 156 (187)
T 2fhp_A 122 LDPPYAKQEIV---SQLEKMLERQLLTN---EAVIVCETDK 156 (187)
T ss_dssp ECCCGGGCCHH---HHHHHHHHTTCEEE---EEEEEEEEET
T ss_pred ECCCCCchhHH---HHHHHHHHhcccCC---CCEEEEEeCC
Confidence 98886633333 445555 788999 8888775443
No 182
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.00 E-value=6.2e-10 Score=96.94 Aligned_cols=95 Identities=20% Similarity=0.392 Sum_probs=76.8
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCCCCC--CccEEEehhhhc
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFEAIP--PADAVLLKWILH 266 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~~~p--~~D~~~~~~vlh 266 (306)
.+..+|||+|||+|.++..+++..+ +++++|+ |.+++.+++ ..+ +++..+|+.++.+ .||+|++....|
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~~~~~~fD~Vv~n~~~~ 195 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAALPFGPFDLLVANLYAE 195 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHHGGGCCEEEEEEECCHH
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhcCcCCCCCEEEECCcHH
Confidence 4568999999999999999998766 8999999 888888776 223 8999999877443 599999865443
Q ss_pred cCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 267 DWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 267 ~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
....+++++++.|+| ||++++.+...
T Consensus 196 -----~~~~~l~~~~~~Lkp---gG~lils~~~~ 221 (254)
T 2nxc_A 196 -----LHAALAPRYREALVP---GGRALLTGILK 221 (254)
T ss_dssp -----HHHHHHHHHHHHEEE---EEEEEEEEEEG
T ss_pred -----HHHHHHHHHHHHcCC---CCEEEEEeecc
Confidence 246789999999999 89999877654
No 183
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.00 E-value=1.2e-09 Score=93.99 Aligned_cols=97 Identities=13% Similarity=0.107 Sum_probs=78.1
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCC-CCeEEEecc-hHHHHhchh------cCCCeEEEeccCCC--C-C-------CC
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFP-NLECTDFDL-PHVVNGLES------DLANLKYVGGDMFE--A-I-------PP 255 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~--~-~-------p~ 255 (306)
..++.+|||||||+|..+..+++..| +.+++++|+ +.+++.|++ ..++|+++.+|..+ + . ..
T Consensus 68 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 68 LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGS 147 (237)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCC
Confidence 34578999999999999999999988 789999999 888888876 34689999999875 2 2 35
Q ss_pred ccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 256 ADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 256 ~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
||+|++.. +......+++.+.+.|+| ||.+++.+.
T Consensus 148 fD~I~~d~-----~~~~~~~~l~~~~~~L~p---GG~lv~d~~ 182 (237)
T 3c3y_A 148 YDFGFVDA-----DKPNYIKYHERLMKLVKV---GGIVAYDNT 182 (237)
T ss_dssp EEEEEECS-----CGGGHHHHHHHHHHHEEE---EEEEEEECT
T ss_pred cCEEEECC-----chHHHHHHHHHHHHhcCC---CeEEEEecC
Confidence 99998752 234457889999999999 787776554
No 184
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.00 E-value=1.5e-09 Score=95.38 Aligned_cols=104 Identities=14% Similarity=0.254 Sum_probs=82.8
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHH-CCCCeEEEecc-hHHHHhchh----c----CCCeEEEeccCCC-C
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKA-FPNLECTDFDL-PHVVNGLES----D----LANLKYVGGDMFE-A 252 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~Dl-~~~~~~a~~----~----~~rv~~~~~d~~~-~ 252 (306)
..++..++ .....+|||+|||+|.++..+++. .|..+++++|. +.+++.|++ . .+++++..+|+.+ +
T Consensus 89 ~~i~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~ 166 (280)
T 1i9g_A 89 AQIVHEGD--IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE 166 (280)
T ss_dssp HHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC
T ss_pred HHHHHHcC--CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC
Confidence 34455555 566789999999999999999986 57889999999 888888876 2 4689999999987 4
Q ss_pred CC--CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 253 IP--PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 253 ~p--~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
.+ .+|+|++ +.++.. .+|+++.++|+| ||++++....
T Consensus 167 ~~~~~~D~v~~-----~~~~~~--~~l~~~~~~L~p---gG~l~~~~~~ 205 (280)
T 1i9g_A 167 LPDGSVDRAVL-----DMLAPW--EVLDAVSRLLVA---GGVLMVYVAT 205 (280)
T ss_dssp CCTTCEEEEEE-----ESSCGG--GGHHHHHHHEEE---EEEEEEEESS
T ss_pred CCCCceeEEEE-----CCcCHH--HHHHHHHHhCCC---CCEEEEEeCC
Confidence 43 5999998 234432 679999999999 8999997754
No 185
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.00 E-value=7.8e-10 Score=97.61 Aligned_cols=96 Identities=15% Similarity=0.094 Sum_probs=78.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCCC-CC-CccEEEehhhh
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFEA-IP-PADAVLLKWIL 265 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~~-~p-~~D~~~~~~vl 265 (306)
.+..+|||+|||+|.++..+++..+. +++++|+ +.+++.|++ ..++++++.+|+++. .+ .||+|++...
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p- 201 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV- 201 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC-
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCc-
Confidence 45689999999999999999999877 8999999 888888876 356799999999983 33 5999988433
Q ss_pred ccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 266 HDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 266 h~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
. ....+++++.+.|+| ||++++.+...
T Consensus 202 ----~-~~~~~l~~~~~~Lkp---gG~l~~~~~~~ 228 (278)
T 2frn_A 202 ----V-RTHEFIPKALSIAKD---GAIIHYHNTVP 228 (278)
T ss_dssp ----S-SGGGGHHHHHHHEEE---EEEEEEEEEEE
T ss_pred ----h-hHHHHHHHHHHHCCC---CeEEEEEEeec
Confidence 1 124689999999999 89999987763
No 186
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.98 E-value=5.2e-11 Score=103.46 Aligned_cols=100 Identities=11% Similarity=0.022 Sum_probs=70.8
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCC----CCCC-----CccEE
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMF----EAIP-----PADAV 259 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~----~~~p-----~~D~~ 259 (306)
...+|||+|||+|.++..+++++|+.+++++|+ +.+++.|++ ..++|+++.+|+. ++.+ .||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 467999999999999999999998899999999 889988886 3457999999853 3443 49999
Q ss_pred EehhhhccCCc-------------hHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 260 LLKWILHDWND-------------EECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 260 ~~~~vlh~~~d-------------~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
++.-..|.... +....++++++++|+| ||++.+++.
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Lkp---gG~l~~~~~ 193 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAE---GGELEFVKR 193 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHH---HTHHHHHHH
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEec---CCEEEEEHH
Confidence 99866554331 0112456777777887 676665543
No 187
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.98 E-value=2e-09 Score=98.26 Aligned_cols=111 Identities=16% Similarity=0.172 Sum_probs=84.7
Q ss_pred HHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHC-CCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCC-CC-
Q 021867 183 TRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAF-PNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFE-AI- 253 (306)
Q Consensus 183 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~-~~- 253 (306)
+..++.... +.+..+|||+|||+|.++..++... |+.+++++|+ +.+++.|++ ..++|++..+|+.+ +.
T Consensus 192 a~~l~~~~~--~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~ 269 (354)
T 3tma_A 192 AQALLRLAD--ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRF 269 (354)
T ss_dssp HHHHHHHTT--CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGT
T ss_pred HHHHHHHhC--CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccc
Confidence 344444444 5667899999999999999999988 8999999999 889988886 22389999999988 43
Q ss_pred -CCccEEEehhhhccCCc--hH----HHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 254 -PPADAVLLKWILHDWND--EE----CVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 254 -p~~D~~~~~~vlh~~~d--~~----~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
+.+|+|++.-..+.... .+ -..+++++++.|+| ||+++++..
T Consensus 270 ~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~Lkp---gG~l~i~t~ 318 (354)
T 3tma_A 270 FPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPP---GGRVALLTL 318 (354)
T ss_dssp CCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCT---TCEEEEEES
T ss_pred cCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCC---CcEEEEEeC
Confidence 35899998655432111 11 25789999999999 899988754
No 188
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.98 E-value=2.3e-09 Score=91.25 Aligned_cols=94 Identities=18% Similarity=0.209 Sum_probs=77.6
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHC-----CCCeEEEecc-hHHHHhchh-----c-----CCCeEEEeccCCCCC----
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAF-----PNLECTDFDL-PHVVNGLES-----D-----LANLKYVGGDMFEAI---- 253 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~-----p~~~~~~~Dl-~~~~~~a~~-----~-----~~rv~~~~~d~~~~~---- 253 (306)
.....+|||||||+|.++..+++.. |..+++++|. +.+++.|++ . .++++++.+|+.+..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 3456899999999999999999987 5779999999 888888876 2 578999999998743
Q ss_pred C---CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 254 P---PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 254 p---~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
+ .||+|++...+|++ ++++.+.|+| ||++++.-.
T Consensus 158 ~~~~~fD~I~~~~~~~~~--------~~~~~~~Lkp---gG~lv~~~~ 194 (227)
T 2pbf_A 158 KELGLFDAIHVGASASEL--------PEILVDLLAE---NGKLIIPIE 194 (227)
T ss_dssp HHHCCEEEEEECSBBSSC--------CHHHHHHEEE---EEEEEEEEE
T ss_pred ccCCCcCEEEECCchHHH--------HHHHHHhcCC---CcEEEEEEc
Confidence 2 59999999988854 4677889999 898888643
No 189
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.98 E-value=2e-10 Score=93.95 Aligned_cols=98 Identities=11% Similarity=0.014 Sum_probs=75.4
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCCC---C-CCccEEEehh
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFEA---I-PPADAVLLKW 263 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~~---~-p~~D~~~~~~ 263 (306)
....+|||+|||+|.++..+++. +..+++++|+ +.+++.|++ ..++++++.+|+.+. . ..||+|++..
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 35679999999999999999987 6679999999 888888876 235899999998772 2 2599999986
Q ss_pred hhccCCchHHHHHHHHHH--HhcCCCCCCcEEEEEeee
Q 021867 264 ILHDWNDEECVKILKKCK--EAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 264 vlh~~~d~~~~~iL~~~~--~~L~p~~~gg~lli~e~~ 299 (306)
++|. .....+++.+. +.|+| ||++++....
T Consensus 109 ~~~~---~~~~~~~~~l~~~~~L~~---gG~l~~~~~~ 140 (177)
T 2esr_A 109 PYAK---ETIVATIEALAAKNLLSE---QVMVVCETDK 140 (177)
T ss_dssp SSHH---HHHHHHHHHHHHTTCEEE---EEEEEEEEET
T ss_pred CCCc---chHHHHHHHHHhCCCcCC---CcEEEEEECC
Confidence 6542 22245566666 88999 8888776543
No 190
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.97 E-value=6e-09 Score=89.64 Aligned_cols=101 Identities=16% Similarity=0.200 Sum_probs=80.6
Q ss_pred HHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCCCC-C--
Q 021867 185 VVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFEAI-P-- 254 (306)
Q Consensus 185 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~~~-p-- 254 (306)
.++...+ .....+|||+|||+|.++..+++. ..+++++|. +.+++.|++ ..+++++..+|+.+.. +
T Consensus 82 ~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 157 (248)
T 2yvl_A 82 YIALKLN--LNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEG 157 (248)
T ss_dssp HHHHHTT--CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTT
T ss_pred HHHHhcC--CCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCC
Confidence 3444444 456789999999999999999998 679999998 888888876 2378999999999855 4
Q ss_pred CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 255 PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 255 ~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
.||++++ +.++. ..+++++.+.|+| ||++++....
T Consensus 158 ~~D~v~~-----~~~~~--~~~l~~~~~~L~~---gG~l~~~~~~ 192 (248)
T 2yvl_A 158 IFHAAFV-----DVREP--WHYLEKVHKSLME---GAPVGFLLPT 192 (248)
T ss_dssp CBSEEEE-----CSSCG--GGGHHHHHHHBCT---TCEEEEEESS
T ss_pred cccEEEE-----CCcCH--HHHHHHHHHHcCC---CCEEEEEeCC
Confidence 5999997 33443 3679999999999 8999987753
No 191
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.97 E-value=6.3e-10 Score=93.37 Aligned_cols=97 Identities=14% Similarity=0.146 Sum_probs=75.2
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cC--CCeEEEeccCCC--CC---CC-ccEEEe
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DL--ANLKYVGGDMFE--AI---PP-ADAVLL 261 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~--~rv~~~~~d~~~--~~---p~-~D~~~~ 261 (306)
...+|||+|||+|.++..++.+.. .+++++|+ +.+++.|++ .. ++++++.+|+.+ +. .. ||+|++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQA-KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccC-CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 457999999999999998877653 58999999 889998886 22 689999999876 21 26 999999
Q ss_pred hhhhccCCchHHHHHHHHH--HHhcCCCCCCcEEEEEeee
Q 021867 262 KWILHDWNDEECVKILKKC--KEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 262 ~~vlh~~~d~~~~~iL~~~--~~~L~p~~~gg~lli~e~~ 299 (306)
...+| ..+ ...+++.+ .+.|+| ||.+++....
T Consensus 132 ~~~~~-~~~--~~~~l~~~~~~~~Lkp---gG~l~i~~~~ 165 (201)
T 2ift_A 132 DPPFH-FNL--AEQAISLLCENNWLKP---NALIYVETEK 165 (201)
T ss_dssp CCCSS-SCH--HHHHHHHHHHTTCEEE---EEEEEEEEES
T ss_pred CCCCC-Ccc--HHHHHHHHHhcCccCC---CcEEEEEECC
Confidence 88765 333 35678888 557999 8888776543
No 192
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.97 E-value=8.9e-10 Score=94.53 Aligned_cols=99 Identities=14% Similarity=0.197 Sum_probs=79.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCC-CCeEEEecc-hHHHHhchh------cCCCeEEEeccCCC--C-C------CCcc
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFP-NLECTDFDL-PHVVNGLES------DLANLKYVGGDMFE--A-I------PPAD 257 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~--~-~------p~~D 257 (306)
.++.+|||||||+|..+..+++..| +.+++++|. +.+++.|++ ..++|++..+|+.+ + . ..||
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 4567999999999999999999987 689999999 888888876 34689999999754 1 1 4599
Q ss_pred EEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecC
Q 021867 258 AVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRE 301 (306)
Q Consensus 258 ~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~ 301 (306)
+|++... .+....+++++.+.|+| ||.|++.+...+
T Consensus 151 ~V~~d~~-----~~~~~~~l~~~~~~Lkp---gG~lv~~~~~~~ 186 (232)
T 3cbg_A 151 LIFIDAD-----KRNYPRYYEIGLNLLRR---GGLMVIDNVLWH 186 (232)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHTEEE---EEEEEEECTTGG
T ss_pred EEEECCC-----HHHHHHHHHHHHHHcCC---CeEEEEeCCCcC
Confidence 9987643 33456789999999999 888888766543
No 193
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.96 E-value=1.1e-09 Score=93.39 Aligned_cols=93 Identities=19% Similarity=0.276 Sum_probs=76.6
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCC------CCeEEEecc-hHHHHhchh-----c-----CCCeEEEeccCCCCCC--
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFP------NLECTDFDL-PHVVNGLES-----D-----LANLKYVGGDMFEAIP-- 254 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p------~~~~~~~Dl-~~~~~~a~~-----~-----~~rv~~~~~d~~~~~p-- 254 (306)
.....+|||||||+|.++..+++..+ ..+++++|+ +.+++.+++ . .+++++..+|..++.+
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 161 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPN 161 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcC
Confidence 34567999999999999999998765 368999998 888888876 1 5789999999987544
Q ss_pred -CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 255 -PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 255 -~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
.||+|++...+|++. +++.+.|+| ||++++.-
T Consensus 162 ~~fD~I~~~~~~~~~~--------~~~~~~Lkp---gG~lvi~~ 194 (227)
T 1r18_A 162 APYNAIHVGAAAPDTP--------TELINQLAS---GGRLIVPV 194 (227)
T ss_dssp CSEEEEEECSCBSSCC--------HHHHHTEEE---EEEEEEEE
T ss_pred CCccEEEECCchHHHH--------HHHHHHhcC---CCEEEEEE
Confidence 499999999998765 567888999 88888753
No 194
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.95 E-value=7.3e-10 Score=97.70 Aligned_cols=99 Identities=17% Similarity=0.107 Sum_probs=77.8
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-c--------CCCeEEEeccCCC--C-CC-CccEEE
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-D--------LANLKYVGGDMFE--A-IP-PADAVL 260 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-~--------~~rv~~~~~d~~~--~-~p-~~D~~~ 260 (306)
..+.+|||||||+|.++..+++..|..+++++|+ |.+++.|++ . .+|++++.+|.++ + .+ .||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 3578999999999999999998777889999999 899998886 1 4799999999876 2 22 599999
Q ss_pred ehhhhccCCchH--HHHHHHHHHHhcCCCCCCcEEEEE
Q 021867 261 LKWILHDWNDEE--CVKILKKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 261 ~~~vlh~~~d~~--~~~iL~~~~~~L~p~~~gg~lli~ 296 (306)
+.-..+..+.+. ...+++.+++.|+| ||.+++.
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~p---gG~lv~~ 188 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKE---DGIFVAQ 188 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEE---EEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCC---CcEEEEE
Confidence 955443332211 14689999999999 7887775
No 195
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.95 E-value=9.1e-10 Score=94.99 Aligned_cols=100 Identities=18% Similarity=0.119 Sum_probs=85.4
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh----cCCCeEEEeccCCCCCC--CccEEEehhhhcc
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES----DLANLKYVGGDMFEAIP--PADAVLLKWILHD 267 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~----~~~rv~~~~~d~~~~~p--~~D~~~~~~vlh~ 267 (306)
..+.+|||||||.|-++..+...+|+.+++++|+ +.+++.+++ ...+.++...|+..+.| .+|++++.-++|+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~lkti~~ 210 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLKTLPC 210 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEETTCHHH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHHHHHHHH
Confidence 4588999999999999999999999999999999 888888877 45568999999998444 5999999999999
Q ss_pred CCchHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 268 WNDEECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 268 ~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
+.++.....+ ++.++|+| +|.++-.++
T Consensus 211 Le~q~kg~g~-~ll~aL~~---~~vvVSfp~ 237 (281)
T 3lcv_B 211 LETQQRGSGW-EVIDIVNS---PNIVVTFPT 237 (281)
T ss_dssp HHHHSTTHHH-HHHHHSSC---SEEEEEEEC
T ss_pred hhhhhhHHHH-HHHHHhCC---CCEEEeccc
Confidence 9887655666 99999999 666666665
No 196
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.94 E-value=6.2e-10 Score=102.06 Aligned_cols=95 Identities=20% Similarity=0.212 Sum_probs=74.3
Q ss_pred cCCCeEEEecCC------ccHHHHHHHHH-CCCCeEEEecc-hHHHHhchhcCCCeEEEeccCCC-CC--------CCcc
Q 021867 195 EGLNSLVDVGGG------IGTVAKAIAKA-FPNLECTDFDL-PHVVNGLESDLANLKYVGGDMFE-AI--------PPAD 257 (306)
Q Consensus 195 ~~~~~vlDvGgG------~G~~~~~l~~~-~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~-~~--------p~~D 257 (306)
.++.+||||||| +|..+..++++ +|+.+++++|+ +.+. . ..++|+|+.+|+.+ ++ ..||
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---~-~~~rI~fv~GDa~dlpf~~~l~~~d~sFD 290 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---V-DELRIRTIQGDQNDAEFLDRIARRYGPFD 290 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---G-CBTTEEEEECCTTCHHHHHHHHHHHCCEE
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---h-cCCCcEEEEecccccchhhhhhcccCCcc
Confidence 456899999999 66666666654 69999999999 5442 1 45799999999988 43 2599
Q ss_pred EEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 258 AVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 258 ~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
+|++. ..|.+.+ ..+.|+++++.||| ||+++|.|..
T Consensus 291 lVisd-gsH~~~d--~~~aL~el~rvLKP---GGvlVi~Dl~ 326 (419)
T 3sso_A 291 IVIDD-GSHINAH--VRTSFAALFPHVRP---GGLYVIEDMW 326 (419)
T ss_dssp EEEEC-SCCCHHH--HHHHHHHHGGGEEE---EEEEEEECGG
T ss_pred EEEEC-Ccccchh--HHHHHHHHHHhcCC---CeEEEEEecc
Confidence 99875 4576544 46789999999999 8999988876
No 197
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.93 E-value=3.6e-09 Score=89.95 Aligned_cols=94 Identities=17% Similarity=0.179 Sum_probs=76.3
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHC-CCCeEEEecc-hHHHHhchh---c-------CCCeEEEeccCCCCC---CCccE
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAF-PNLECTDFDL-PHVVNGLES---D-------LANLKYVGGDMFEAI---PPADA 258 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-~~~~~~a~~---~-------~~rv~~~~~d~~~~~---p~~D~ 258 (306)
.....+|||||||+|.++..+++.. |..+++++|+ +.+++.+++ . .++++++.+|+.... ..||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 3456799999999999999999885 6679999999 888888775 1 468999999987632 25999
Q ss_pred EEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 259 VLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 259 ~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
|++...++++. +++++.|+| ||++++...
T Consensus 155 i~~~~~~~~~~--------~~~~~~Lkp---gG~lv~~~~ 183 (226)
T 1i1n_A 155 IHVGAAAPVVP--------QALIDQLKP---GGRLILPVG 183 (226)
T ss_dssp EEECSBBSSCC--------HHHHHTEEE---EEEEEEEES
T ss_pred EEECCchHHHH--------HHHHHhcCC---CcEEEEEEe
Confidence 99998887554 577889999 899888643
No 198
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.93 E-value=1.5e-09 Score=95.54 Aligned_cols=99 Identities=21% Similarity=0.226 Sum_probs=81.8
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCCC-CC-CccEEEehhhh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFEA-IP-PADAVLLKWIL 265 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~~-~p-~~D~~~~~~vl 265 (306)
+.+..+|||+|||+|.++..+++..+..+++++|+ +.+++.|++ ..++++++.+|+.+. .+ .+|+|++....
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYVH 196 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEECCCS
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEECCcc
Confidence 45668999999999999999999998889999999 888888876 346799999999874 32 59999887543
Q ss_pred ccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecC
Q 021867 266 HDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRE 301 (306)
Q Consensus 266 h~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~ 301 (306)
....+++++.+.|+| ||.+++.+....
T Consensus 197 ------~~~~~l~~~~~~Lkp---gG~l~~s~~~~~ 223 (272)
T 3a27_A 197 ------KTHKFLDKTFEFLKD---RGVIHYHETVAE 223 (272)
T ss_dssp ------SGGGGHHHHHHHEEE---EEEEEEEEEEEG
T ss_pred ------cHHHHHHHHHHHcCC---CCEEEEEEcCcc
Confidence 234679999999999 899998877653
No 199
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.93 E-value=2.6e-09 Score=89.59 Aligned_cols=97 Identities=11% Similarity=0.133 Sum_probs=74.4
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCC--CCC--CccEEEehhhh
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFE--AIP--PADAVLLKWIL 265 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~--~~p--~~D~~~~~~vl 265 (306)
...+|||+|||+|.++..++++.. .+++++|+ +.+++.|++ ..++++++.+|+.+ +.+ .||+|++...+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 457999999999999999887753 38999999 889988876 23689999999876 332 59999998775
Q ss_pred ccCCchHHHHHHHHHHHh--cCCCCCCcEEEEEeee
Q 021867 266 HDWNDEECVKILKKCKEA--VTSDDKKGKVIIIDMI 299 (306)
Q Consensus 266 h~~~d~~~~~iL~~~~~~--L~p~~~gg~lli~e~~ 299 (306)
| +.+ ...+++.+.+. |+| ||.+++....
T Consensus 133 ~-~~~--~~~~l~~l~~~~~L~p---gG~l~i~~~~ 162 (202)
T 2fpo_A 133 R-RGL--LEETINLLEDNGWLAD---EALIYVESEV 162 (202)
T ss_dssp S-TTT--HHHHHHHHHHTTCEEE---EEEEEEEEEG
T ss_pred C-CCc--HHHHHHHHHhcCccCC---CcEEEEEECC
Confidence 5 333 34667777664 999 7888765443
No 200
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.93 E-value=1.6e-09 Score=95.93 Aligned_cols=99 Identities=13% Similarity=0.088 Sum_probs=79.2
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-c--------CCCeEEEeccCCCC---CC-CccEEE
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-D--------LANLKYVGGDMFEA---IP-PADAVL 260 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-~--------~~rv~~~~~d~~~~---~p-~~D~~~ 260 (306)
..+.+|||||||+|..+..+++..|..+++++|+ +.+++.+++ . .+|++++.+|..+. .+ .||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 4568999999999999999998888889999999 888888887 1 47899999998762 23 599999
Q ss_pred ehhhhccCCchHH--HHHHHHHHHhcCCCCCCcEEEEE
Q 021867 261 LKWILHDWNDEEC--VKILKKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 261 ~~~vlh~~~d~~~--~~iL~~~~~~L~p~~~gg~lli~ 296 (306)
+....+..+.+.. ..+++++++.|+| ||.+++.
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~p---gG~lv~~ 191 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKP---NGYCVAQ 191 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEE---EEEEEEE
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCC---CcEEEEE
Confidence 8554433222222 5889999999999 8888876
No 201
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.93 E-value=1.2e-09 Score=97.97 Aligned_cols=100 Identities=16% Similarity=0.137 Sum_probs=75.0
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-c--------CCCeEEEeccCCCC----CCCccEEE
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-D--------LANLKYVGGDMFEA----IPPADAVL 260 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-~--------~~rv~~~~~d~~~~----~p~~D~~~ 260 (306)
..+.+|||||||+|..+..+++..|..+++++|+ +.+++.|++ . .+||+++.+|..+. ...||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 4568999999999999999999888889999999 889998887 1 47899999998762 22599999
Q ss_pred ehhhhccCCchHH--HHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 261 LKWILHDWNDEEC--VKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 261 ~~~vlh~~~d~~~--~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
+...-|..+++.. ..+++++++.|+| ||.+++..
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~Lkp---gG~lv~~~ 222 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKE---DGILSSQG 222 (314)
T ss_dssp ECCC-------------HHHHHHHHEEE---EEEEEEEC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCC---CeEEEEEC
Confidence 8554332222211 5789999999999 78887753
No 202
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.92 E-value=5.6e-09 Score=89.55 Aligned_cols=105 Identities=13% Similarity=0.128 Sum_probs=75.1
Q ss_pred HHHHhhchh-hhcCCCeEEEecCCccHHHHHHHHH-CCCCeEEEecc-hHHH----HhchhcCCCeEEEeccCCCCC---
Q 021867 184 RVVIHKCKD-VFEGLNSLVDVGGGIGTVAKAIAKA-FPNLECTDFDL-PHVV----NGLESDLANLKYVGGDMFEAI--- 253 (306)
Q Consensus 184 ~~~~~~~~~-~~~~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~Dl-~~~~----~~a~~~~~rv~~~~~d~~~~~--- 253 (306)
..++..++. .+....+|||+|||+|.++..+++. .|+.+++++|+ +.++ +.++ ...+|+++.+|+..+.
T Consensus 63 ~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~-~r~nv~~i~~Da~~~~~~~ 141 (232)
T 3id6_C 63 GAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQ-RRPNIFPLLADARFPQSYK 141 (232)
T ss_dssp HHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHH-HCTTEEEEECCTTCGGGTT
T ss_pred HHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhh-hcCCeEEEEcccccchhhh
Confidence 444444431 1556789999999999999999886 46789999999 5553 3343 3478999999987631
Q ss_pred ---CCccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEE
Q 021867 254 ---PPADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 254 ---p~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~ 296 (306)
..+|+|++.... ++ ....+++.+++.|+| ||++++.
T Consensus 142 ~~~~~~D~I~~d~a~---~~-~~~il~~~~~~~Lkp---GG~lvis 180 (232)
T 3id6_C 142 SVVENVDVLYVDIAQ---PD-QTDIAIYNAKFFLKV---NGDMLLV 180 (232)
T ss_dssp TTCCCEEEEEECCCC---TT-HHHHHHHHHHHHEEE---EEEEEEE
T ss_pred ccccceEEEEecCCC---hh-HHHHHHHHHHHhCCC---CeEEEEE
Confidence 258999876443 22 233345667779999 8999986
No 203
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.92 E-value=8e-09 Score=91.20 Aligned_cols=98 Identities=21% Similarity=0.196 Sum_probs=74.1
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc--hHHHHhchh-c-----C---------CCeEEEeccCCCC---C-
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL--PHVVNGLES-D-----L---------ANLKYVGGDMFEA---I- 253 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl--~~~~~~a~~-~-----~---------~rv~~~~~d~~~~---~- 253 (306)
....+|||||||+|.++..+++.. ..+++++|+ +.+++.+++ . . ++|++...|..+. .
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 456799999999999999888763 348999999 688887765 1 1 4788886665441 1
Q ss_pred -----CCccEEEehhhhccCCchHHHHHHHHHHHhcC---CCCCCcEEEEE
Q 021867 254 -----PPADAVLLKWILHDWNDEECVKILKKCKEAVT---SDDKKGKVIII 296 (306)
Q Consensus 254 -----p~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~---p~~~gg~lli~ 296 (306)
..||+|++..++|+.++ ...+++.+++.|+ | ++||+++|+
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~~~--~~~ll~~l~~~Lk~~~p-~~gG~l~v~ 204 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFHQA--HDALLRSVKMLLALPAN-DPTAVALVT 204 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCGGG--HHHHHHHHHHHBCCTTT-CTTCEEEEE
T ss_pred hhccCCCCCEEEEeCcccChHH--HHHHHHHHHHHhcccCC-CCCCEEEEE
Confidence 25999999999987554 4678999999999 6 236876653
No 204
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.92 E-value=9e-10 Score=98.47 Aligned_cols=100 Identities=17% Similarity=0.139 Sum_probs=76.3
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh---c------CCCeEEEeccCCC--CC-C-CccEEE
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES---D------LANLKYVGGDMFE--AI-P-PADAVL 260 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~---~------~~rv~~~~~d~~~--~~-p-~~D~~~ 260 (306)
..+.+|||||||+|..+..+++..|..+++++|+ +.+++.|++ . .+|++++.+|.++ +. + .||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 4678999999999999999999888889999999 888888876 1 5789999999865 22 2 599999
Q ss_pred ehhhhccCCch--HHHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 261 LKWILHDWNDE--ECVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 261 ~~~vlh~~~d~--~~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
+....+..+.. ....+++++++.|+| ||.+++..
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~~ 209 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKE---DGVLCCQG 209 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEE---EEEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCC---CeEEEEec
Confidence 86544322211 124689999999999 78877754
No 205
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.91 E-value=1.6e-09 Score=97.51 Aligned_cols=99 Identities=13% Similarity=0.111 Sum_probs=77.3
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh---c------CCCeEEEeccCCCC---CC-CccEEE
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES---D------LANLKYVGGDMFEA---IP-PADAVL 260 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~---~------~~rv~~~~~d~~~~---~p-~~D~~~ 260 (306)
..+.+|||||||+|..+..+++..|..+++++|+ +.+++.|++ . .+|++++.+|..+. .+ .||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 4568999999999999999998878889999999 889988876 1 46899999998762 22 599999
Q ss_pred ehhhhccCCchHH--HHHHHHHHHhcCCCCCCcEEEEE
Q 021867 261 LKWILHDWNDEEC--VKILKKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 261 ~~~vlh~~~d~~~--~~iL~~~~~~L~p~~~gg~lli~ 296 (306)
+...-+..+.+.. ..+++++++.|+| ||.+++.
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~ 229 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKP---NGYCVAQ 229 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEE---EEEEEEE
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCC---CcEEEEE
Confidence 8543221111111 5789999999999 7888774
No 206
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.91 E-value=3.6e-09 Score=95.01 Aligned_cols=103 Identities=14% Similarity=0.175 Sum_probs=79.0
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCC-CCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCC-C-CC-CccEEEeh-
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFP-NLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFE-A-IP-PADAVLLK- 262 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~-~-~p-~~D~~~~~- 262 (306)
.....+|||+|||+|..+..+++..+ ..+++++|+ +.+++.+++ ...+|+++.+|+.+ + .+ .||+|++.
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~ 195 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDA 195 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEEC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeC
Confidence 45668999999999999999999975 479999999 778887776 34579999999987 3 23 59999983
Q ss_pred -----hhhcc-------CCchH-------HHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 263 -----WILHD-------WNDEE-------CVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 263 -----~vlh~-------~~d~~-------~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
.+++. |+.++ ...+|+++.+.|+| ||++++....
T Consensus 196 Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~Lkp---GG~lv~stcs 248 (315)
T 1ixk_A 196 PCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKP---GGILVYSTCS 248 (315)
T ss_dssp CTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEESC
T ss_pred CCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCC---CCEEEEEeCC
Confidence 22332 33222 15899999999999 8999886543
No 207
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.91 E-value=1.6e-09 Score=97.30 Aligned_cols=100 Identities=15% Similarity=0.081 Sum_probs=79.8
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-c---------CCCeEEEeccCCCC---CC-CccEE
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-D---------LANLKYVGGDMFEA---IP-PADAV 259 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-~---------~~rv~~~~~d~~~~---~p-~~D~~ 259 (306)
..+.+|||||||+|..+..+++..|..+++++|+ +.+++.|++ . .+|++++.+|..+. .+ .||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 4568999999999999999999888889999999 888888876 1 47899999998762 22 59999
Q ss_pred Eehhhhcc---CCchH--HHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 260 LLKWILHD---WNDEE--CVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 260 ~~~~vlh~---~~d~~--~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
++....|. -+.+. ...+++++++.|+| ||.+++.-
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~~ 195 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNP---GGVMGMQT 195 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEE---EEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCC---CcEEEEEc
Confidence 99766654 11111 25789999999999 88888763
No 208
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.91 E-value=1.6e-09 Score=95.83 Aligned_cols=98 Identities=14% Similarity=0.106 Sum_probs=75.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-c--------------CCCeEEEeccCCCC---CCC
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-D--------------LANLKYVGGDMFEA---IPP 255 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-~--------------~~rv~~~~~d~~~~---~p~ 255 (306)
..+.+|||||||+|..+..+++. |..+++++|+ +.+++.|++ . .+|++++.+|..+. ...
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 45689999999999999999988 8889999999 888888775 2 36899999998652 235
Q ss_pred ccEEEehhhhccCCchH--HHHHHHHHHHhcCCCCCCcEEEEE
Q 021867 256 ADAVLLKWILHDWNDEE--CVKILKKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 256 ~D~~~~~~vlh~~~d~~--~~~iL~~~~~~L~p~~~gg~lli~ 296 (306)
||+|++....+..+.+. ...+++++++.|+| ||.+++.
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~p---gG~lv~~ 192 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNN---PGIYVTQ 192 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEE---EEEEEEE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCC---CcEEEEE
Confidence 99999865543222222 25789999999999 7888775
No 209
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.90 E-value=1.6e-09 Score=98.10 Aligned_cols=99 Identities=18% Similarity=0.141 Sum_probs=77.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-c--------CCCeEEEeccCCC---CCC--CccEE
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-D--------LANLKYVGGDMFE---AIP--PADAV 259 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-~--------~~rv~~~~~d~~~---~~p--~~D~~ 259 (306)
..+.+|||||||+|..+..+++..|..+++++|+ +.+++.|++ . .+||+++.+|+.+ ..+ .||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 4578999999999999999999888889999999 888888876 1 4689999999865 232 59999
Q ss_pred EehhhhccCCchH--HHHHHHHHHHhcCCCCCCcEEEEE
Q 021867 260 LLKWILHDWNDEE--CVKILKKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 260 ~~~~vlh~~~d~~--~~~iL~~~~~~L~p~~~gg~lli~ 296 (306)
++....+....+. ...+++.+++.|+| ||.+++.
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~ 234 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRP---GGVVCTQ 234 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEE---EEEEEEE
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCC---CcEEEEe
Confidence 9854321111111 35789999999999 8888775
No 210
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.90 E-value=2.4e-09 Score=89.20 Aligned_cols=103 Identities=13% Similarity=0.303 Sum_probs=74.9
Q ss_pred HHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchhcCCCeEEEeccCCCCC-----------
Q 021867 185 VVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLKYVGGDMFEAI----------- 253 (306)
Q Consensus 185 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~~~~rv~~~~~d~~~~~----------- 253 (306)
.+.+.+. .+.+..+|||+|||+|.++..++++ ..+++++|+.++ . ..++|+++.+|+.++.
T Consensus 15 ei~~~~~-~~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~----~-~~~~v~~~~~D~~~~~~~~~~~~~~~~ 86 (191)
T 3dou_A 15 FLLDRYR-VVRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEM----E-EIAGVRFIRCDIFKETIFDDIDRALRE 86 (191)
T ss_dssp HHHHHHC-CSCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCC----C-CCTTCEEEECCTTSSSHHHHHHHHHHH
T ss_pred HHHHHcC-CCCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEecccc----c-cCCCeEEEEccccCHHHHHHHHHHhhc
Confidence 4455554 2456789999999999999999988 778999999542 1 3468999999998732
Q ss_pred ---CCccEEEehhhhcc---C------CchHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 254 ---PPADAVLLKWILHD---W------NDEECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 254 ---p~~D~~~~~~vlh~---~------~d~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
..+|+|++...... + .-+.+..+|+.+.+.|+| ||++++.-+
T Consensus 87 ~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~Lkp---GG~lv~k~~ 140 (191)
T 3dou_A 87 EGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRN---GGNVLLKQF 140 (191)
T ss_dssp HTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEEE
T ss_pred ccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccC---CCEEEEEEc
Confidence 36999998542211 1 112245789999999999 898886543
No 211
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.89 E-value=2.4e-09 Score=94.89 Aligned_cols=102 Identities=18% Similarity=0.313 Sum_probs=75.8
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-c-----CCCeEEEeccCCC-CCCC
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-D-----LANLKYVGGDMFE-AIPP 255 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-~-----~~rv~~~~~d~~~-~~p~ 255 (306)
..+++.+. .....+|||||||+|.++..+++.. .+++++|+ +.+++.+++ . .++++++.+|+.+ +.+.
T Consensus 18 ~~i~~~~~--~~~~~~VLDiG~G~G~lt~~L~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~~ 93 (285)
T 1zq9_A 18 NSIIDKAA--LRPTDVVLEVGPGTGNMTVKLLEKA--KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPF 93 (285)
T ss_dssp HHHHHHTC--CCTTCEEEEECCTTSTTHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCCC
T ss_pred HHHHHhcC--CCCCCEEEEEcCcccHHHHHHHhhC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccchh
Confidence 44555554 4567899999999999999999985 47999999 888888776 1 2689999999998 6778
Q ss_pred ccEEEehhhhccCCchHHHHHHH--------------HH--HHhcCCCCCCcEE
Q 021867 256 ADAVLLKWILHDWNDEECVKILK--------------KC--KEAVTSDDKKGKV 293 (306)
Q Consensus 256 ~D~~~~~~vlh~~~d~~~~~iL~--------------~~--~~~L~p~~~gg~l 293 (306)
+|+++++ ..++|+.+....+|. ++ +.+++| ||++
T Consensus 94 fD~vv~n-lpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkP---Gg~~ 143 (285)
T 1zq9_A 94 FDTCVAN-LPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKP---GDKL 143 (285)
T ss_dssp CSEEEEE-CCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCT---TCTT
T ss_pred hcEEEEe-cCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCC---CCcc
Confidence 9988884 334465555555553 23 358898 7765
No 212
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.88 E-value=4.3e-09 Score=89.92 Aligned_cols=96 Identities=10% Similarity=0.092 Sum_probs=79.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh----cCCCeEEEeccCCC-CCC-CccEEEehhhhcc
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES----DLANLKYVGGDMFE-AIP-PADAVLLKWILHD 267 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~----~~~rv~~~~~d~~~-~~p-~~D~~~~~~vlh~ 267 (306)
..+.+|||||||.|-++..+. |..+++++|+ +.+++.+++ ...+.++...|+.. +.| .+|++++.-++|+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLllk~lh~ 180 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIFKLLPL 180 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEESCHHH
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHHHHHHH
Confidence 568899999999999998877 8999999999 889998887 46778999999998 444 5999999999998
Q ss_pred CCchHHHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 268 WNDEECVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 268 ~~d~~~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
+.+.+....+ ++.++|++ ++.++-++
T Consensus 181 LE~q~~~~~~-~ll~aL~~---~~vvVsfP 206 (253)
T 3frh_A 181 LEREQAGSAM-ALLQSLNT---PRMAVSFP 206 (253)
T ss_dssp HHHHSTTHHH-HHHHHCBC---SEEEEEEE
T ss_pred hhhhchhhHH-HHHHHhcC---CCEEEEcC
Confidence 8776654455 88899998 55555555
No 213
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.88 E-value=2.3e-10 Score=98.38 Aligned_cols=87 Identities=16% Similarity=0.137 Sum_probs=68.5
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCC-CCC-CccEEEehhhhc
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFE-AIP-PADAVLLKWILH 266 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~-~~p-~~D~~~~~~vlh 266 (306)
...+|||+|||+|.++..+++.. .+++++|+ +.+++.|++ ..++++++.+|+.+ +.+ .||+|++..++|
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWG 155 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCCS
T ss_pred CCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCcC
Confidence 56899999999999999999874 78999999 888888876 12689999999987 322 699999998888
Q ss_pred cCCchHHHHHHHHHHHhcCC
Q 021867 267 DWNDEECVKILKKCKEAVTS 286 (306)
Q Consensus 267 ~~~d~~~~~iL~~~~~~L~p 286 (306)
...+.. ..+.+++++|+|
T Consensus 156 ~~~~~~--~~~~~~~~~L~p 173 (241)
T 3gdh_A 156 GPDYAT--AETFDIRTMMSP 173 (241)
T ss_dssp SGGGGG--SSSBCTTTSCSS
T ss_pred Ccchhh--hHHHHHHhhcCC
Confidence 765543 234455555665
No 214
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.88 E-value=4.7e-09 Score=94.97 Aligned_cols=103 Identities=16% Similarity=0.198 Sum_probs=79.4
Q ss_pred HHHhhchhhhcCCCeEEEecCCccHHHHHHHHH-CCCCeEEEecc-hHHHHhchh--c--------------CCCeEEEe
Q 021867 185 VVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKA-FPNLECTDFDL-PHVVNGLES--D--------------LANLKYVG 246 (306)
Q Consensus 185 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~Dl-~~~~~~a~~--~--------------~~rv~~~~ 246 (306)
.++..++ .....+|||+|||+|.++..+++. .|+.+++++|+ +.+++.|++ . .++|++..
T Consensus 96 ~~l~~l~--~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 96 MILSMMD--INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp HHHHHHT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred HHHHhcC--CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 3444444 556789999999999999999998 58889999999 888888876 1 36899999
Q ss_pred ccCCCC---CC--CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 247 GDMFEA---IP--PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 247 ~d~~~~---~p--~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
+|+.+. .+ .||+|++.. +++. .+++++++.|+| ||++++....
T Consensus 174 ~d~~~~~~~~~~~~fD~V~~~~-----~~~~--~~l~~~~~~Lkp---gG~lv~~~~~ 221 (336)
T 2b25_A 174 KDISGATEDIKSLTFDAVALDM-----LNPH--VTLPVFYPHLKH---GGVCAVYVVN 221 (336)
T ss_dssp SCTTCCC-------EEEEEECS-----SSTT--TTHHHHGGGEEE---EEEEEEEESS
T ss_pred CChHHcccccCCCCeeEEEECC-----CCHH--HHHHHHHHhcCC---CcEEEEEeCC
Confidence 999873 33 499999843 2221 378999999999 8999987653
No 215
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.87 E-value=3.1e-09 Score=88.10 Aligned_cols=97 Identities=16% Similarity=0.286 Sum_probs=73.7
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCC---------CeEEEecchHHHHhchhcCCCeEEE-eccCCCC---------CC
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPN---------LECTDFDLPHVVNGLESDLANLKYV-GGDMFEA---------IP 254 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~---------~~~~~~Dl~~~~~~a~~~~~rv~~~-~~d~~~~---------~p 254 (306)
+....+|||||||+|.++..++++++. .+++++|+.++. ..+++++. .+|+.+. .+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----~~~~~~~~~~~d~~~~~~~~~~~~~~~ 94 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----PLEGATFLCPADVTDPRTSQRILEVLP 94 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----CCTTCEEECSCCTTSHHHHHHHHHHSG
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----cCCCCeEEEeccCCCHHHHHHHHHhcC
Confidence 355689999999999999999999875 799999986521 24678999 9998762 22
Q ss_pred --CccEEEehhhhcc---C-CchH-----HHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 255 --PADAVLLKWILHD---W-NDEE-----CVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 255 --~~D~~~~~~vlh~---~-~d~~-----~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
.||+|++...+|. | .+.. ...+++++++.|+| ||++++...
T Consensus 95 ~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~lv~~~~ 146 (196)
T 2nyu_A 95 GRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQP---GGTFLCKTW 146 (196)
T ss_dssp GGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEEC
T ss_pred CCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcC---CCEEEEEec
Confidence 5999998655442 1 2221 14789999999999 899988754
No 216
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.87 E-value=1.6e-09 Score=105.03 Aligned_cols=104 Identities=13% Similarity=0.173 Sum_probs=83.0
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh---c--CCCeEEEeccCCC---CC-C-CccEEEeh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES---D--LANLKYVGGDMFE---AI-P-PADAVLLK 262 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~---~--~~rv~~~~~d~~~---~~-p-~~D~~~~~ 262 (306)
+.++.+|||||||.|.++..|++. +.+++++|. +.+++.|+. . .-+|+|..++..+ +. + .||+|++.
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~ 141 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGL 141 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEE
T ss_pred cCCCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEEC
Confidence 456789999999999999999997 568999999 888888876 2 2369999998865 23 2 59999999
Q ss_pred hhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCC
Q 021867 263 WILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIREN 302 (306)
Q Consensus 263 ~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~ 302 (306)
.+||+.+|++...-+.++.+.+.+ +++.++...+..|
T Consensus 142 e~~ehv~~~~~~~~~~~~~~tl~~---~~~~~~~~~~~~e 178 (569)
T 4azs_A 142 SVFHHIVHLHGIDEVKRLLSRLAD---VTQAVILELAVKE 178 (569)
T ss_dssp SCHHHHHHHHCHHHHHHHHHHHHH---HSSEEEEECCCTT
T ss_pred cchhcCCCHHHHHHHHHHHHHhcc---ccceeeEEecccc
Confidence 999999987755556677778877 6777777665544
No 217
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.87 E-value=3.5e-09 Score=92.75 Aligned_cols=98 Identities=16% Similarity=0.111 Sum_probs=71.4
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchh-cCC------CeEEE--eccCCC-CCCCccEEEehh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLES-DLA------NLKYV--GGDMFE-AIPPADAVLLKW 263 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~-~~~------rv~~~--~~d~~~-~~p~~D~~~~~~ 263 (306)
+....+|||||||+|.++..+++. .+++++|+.+++..+++ ... +|+++ .+|+.+ +...||+|++..
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~V~sd~ 148 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLPVERTDVIMCDV 148 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCCCCCCcEEEEeC
Confidence 456789999999999999999887 57999999555433322 112 78999 999988 423599999986
Q ss_pred hhccCCch----H-HHHHHHHHHHhcCCCCCCc--EEEEEee
Q 021867 264 ILHDWNDE----E-CVKILKKCKEAVTSDDKKG--KVIIIDM 298 (306)
Q Consensus 264 vlh~~~d~----~-~~~iL~~~~~~L~p~~~gg--~lli~e~ 298 (306)
. +...+. . ...+|+.++++|+| || .+++-.+
T Consensus 149 ~-~~~~~~~~d~~~~l~~L~~~~r~Lkp---GG~~~fv~kv~ 186 (265)
T 2oxt_A 149 G-ESSPKWSVESERTIKILELLEKWKVK---NPSADFVVKVL 186 (265)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHH---CTTCEEEEEES
T ss_pred c-ccCCccchhHHHHHHHHHHHHHHhcc---CCCeEEEEEeC
Confidence 6 433221 1 12478999999999 89 7877443
No 218
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.86 E-value=6.6e-09 Score=86.68 Aligned_cols=89 Identities=18% Similarity=0.204 Sum_probs=68.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhcCCCeEEEeccCCCCCCCccEEEehhhhccCCchHH
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESDLANLKYVGGDMFEAIPPADAVLLKWILHDWNDEEC 273 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~~~p~~D~~~~~~vlh~~~d~~~ 273 (306)
....+|||+|||+|.++..+++. +..+++++|+ +.+++.+++...+++++.+|+.+....||+|++.-++|.+.+...
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~D~v~~~~p~~~~~~~~~ 128 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEISGKYDTWIMNPPFGSVVKHSD 128 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCCCCEEEEEECCCC-------C
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCCCCeeEEEECCCchhccCchh
Confidence 45679999999999999999987 5557999999 889999887333899999999882246999999999998876544
Q ss_pred HHHHHHHHHhc
Q 021867 274 VKILKKCKEAV 284 (306)
Q Consensus 274 ~~iL~~~~~~L 284 (306)
..+++++.+.+
T Consensus 129 ~~~l~~~~~~~ 139 (200)
T 1ne2_A 129 RAFIDKAFETS 139 (200)
T ss_dssp HHHHHHHHHHE
T ss_pred HHHHHHHHHhc
Confidence 57888888877
No 219
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.86 E-value=3e-09 Score=93.73 Aligned_cols=98 Identities=15% Similarity=0.058 Sum_probs=71.5
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchh-cCC------CeEEE--eccCCC-CCCCccEEEehh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLES-DLA------NLKYV--GGDMFE-AIPPADAVLLKW 263 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~-~~~------rv~~~--~~d~~~-~~p~~D~~~~~~ 263 (306)
+....+|||||||+|.++..++++ .+++++|+.+++..+++ ... +|+++ .+|+.+ +...||+|++..
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~Vvsd~ 156 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKMEPFQADTVLCDI 156 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCCCCCCSEEEECC
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCCCCCcCEEEECC
Confidence 456789999999999999999987 57999999555433332 112 78999 999987 423599999987
Q ss_pred hhccCCc----hH-HHHHHHHHHHhcCCCCCCc--EEEEEee
Q 021867 264 ILHDWND----EE-CVKILKKCKEAVTSDDKKG--KVIIIDM 298 (306)
Q Consensus 264 vlh~~~d----~~-~~~iL~~~~~~L~p~~~gg--~lli~e~ 298 (306)
. +.... .. ...+|+.+.++|+| || .+++..+
T Consensus 157 ~-~~~~~~~~d~~~~l~~L~~~~r~Lkp---GG~~~~v~~~~ 194 (276)
T 2wa2_A 157 G-ESNPTAAVEASRTLTVLNVISRWLEY---NQGCGFCVKVL 194 (276)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHH---STTCEEEEEES
T ss_pred C-cCCCchhhhHHHHHHHHHHHHHHhcc---CCCcEEEEEeC
Confidence 6 43322 11 12478999999999 89 8777443
No 220
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.86 E-value=2.1e-09 Score=95.77 Aligned_cols=99 Identities=12% Similarity=0.097 Sum_probs=74.9
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-c--------CCCeEEEeccCCC--C-CC-CccEEE
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-D--------LANLKYVGGDMFE--A-IP-PADAVL 260 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-~--------~~rv~~~~~d~~~--~-~p-~~D~~~ 260 (306)
..+.+|||||||+|..+..+++..|..+++++|+ +.+++.+++ . .+|++++.+|..+ + .+ .||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 3568999999999999999999888889999999 888888876 1 4799999999865 2 22 599999
Q ss_pred ehhhhccCCch---HHHHHHHHHHHhcCCCCCCcEEEEE
Q 021867 261 LKWILHDWNDE---ECVKILKKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 261 ~~~vlh~~~d~---~~~~iL~~~~~~L~p~~~gg~lli~ 296 (306)
+.-.-+..... ....+++++++.|+| ||.+++.
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~ 204 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKE---DGVFSAE 204 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEE---EEEEEEE
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCC---CcEEEEE
Confidence 74332201110 125789999999999 7888775
No 221
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.83 E-value=6.9e-09 Score=90.74 Aligned_cols=90 Identities=13% Similarity=0.048 Sum_probs=75.0
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-c--------CCCeEEEeccCCCCCCCccEEEehhh
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-D--------LANLKYVGGDMFEAIPPADAVLLKWI 264 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-~--------~~rv~~~~~d~~~~~p~~D~~~~~~v 264 (306)
..+.+|||||||+|..+..+++. + .+++++|+ +.+++.|++ . .+|++++.+|..+-...||+|++.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~~~fD~Ii~d-- 146 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFCL-- 146 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEEEES--
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHHhhCCEEEEC--
Confidence 45689999999999999999988 7 89999999 889998876 1 468999999998733569999985
Q ss_pred hccCCchHHHHHHHHHHHhcCCCCCCcEEEEE
Q 021867 265 LHDWNDEECVKILKKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 265 lh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~ 296 (306)
.+++. .+++.+++.|+| ||.+++.
T Consensus 147 ---~~dp~--~~~~~~~~~L~p---gG~lv~~ 170 (262)
T 2cmg_A 147 ---QEPDI--HRIDGLKRMLKE---DGVFISV 170 (262)
T ss_dssp ---SCCCH--HHHHHHHTTEEE---EEEEEEE
T ss_pred ---CCChH--HHHHHHHHhcCC---CcEEEEE
Confidence 34443 489999999999 8888875
No 222
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.83 E-value=7.8e-09 Score=90.94 Aligned_cols=104 Identities=13% Similarity=0.133 Sum_probs=77.8
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCC-CeEEEecc-hHHHHhchh-----cCCCeEEEeccCCC-CC-----C-CccEE
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPN-LECTDFDL-PHVVNGLES-----DLANLKYVGGDMFE-AI-----P-PADAV 259 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~-~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~-~~-----p-~~D~~ 259 (306)
.....+|||+|||+|..+..+++..++ .+++++|+ +..++.+++ ...+++++.+|+.+ +. + .||+|
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEE
Confidence 345679999999999999999999877 79999999 777877765 34589999999876 22 3 59999
Q ss_pred Eeh------hhhcc---CCc-------hHHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 260 LLK------WILHD---WND-------EECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 260 ~~~------~vlh~---~~d-------~~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
++. .+++. |+. +....+|+++.+.|+| ||++++....+
T Consensus 161 l~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~lv~stcs~ 214 (274)
T 3ajd_A 161 LLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKK---DGELVYSTCSM 214 (274)
T ss_dssp EEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEE---EEEEEEEESCC
T ss_pred EEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCC---CCEEEEEECCC
Confidence 986 22221 222 1236799999999999 89988866544
No 223
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.82 E-value=1.1e-08 Score=93.89 Aligned_cols=95 Identities=15% Similarity=0.213 Sum_probs=71.7
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchh------cCCCeEEEeccCCC-CCC-CccEEEehhhhcc
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLES------DLANLKYVGGDMFE-AIP-PADAVLLKWILHD 267 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~------~~~rv~~~~~d~~~-~~p-~~D~~~~~~vlh~ 267 (306)
+.++|||||||+|.++...+++. ..+++++|..++++.|++ ..++|+++.+|+.+ ..| .+|+|+.-..-+.
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aG-A~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~~ 161 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAG-ARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGYG 161 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBTT
T ss_pred CCCEEEEeCCCccHHHHHHHHhC-CCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeeccccc
Confidence 46789999999999887666654 348999999777777776 57899999999988 667 5999987433332
Q ss_pred CC-chHHHHHHHHHHHhcCCCCCCcEEE
Q 021867 268 WN-DEECVKILKKCKEAVTSDDKKGKVI 294 (306)
Q Consensus 268 ~~-d~~~~~iL~~~~~~L~p~~~gg~ll 294 (306)
.. ......++....+.|+| ||.++
T Consensus 162 l~~e~~l~~~l~a~~r~Lkp---~G~~i 186 (376)
T 4hc4_A 162 LLHESMLSSVLHARTKWLKE---GGLLL 186 (376)
T ss_dssp BTTTCSHHHHHHHHHHHEEE---EEEEE
T ss_pred ccccchhhhHHHHHHhhCCC---CceEC
Confidence 22 22345678888899999 77765
No 224
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.82 E-value=4.1e-09 Score=94.21 Aligned_cols=96 Identities=13% Similarity=0.133 Sum_probs=69.6
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-----hHHHHhchh---cCCCeEEEec-cCCC-CCCCccEEEehh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-----PHVVNGLES---DLANLKYVGG-DMFE-AIPPADAVLLKW 263 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-----~~~~~~a~~---~~~rv~~~~~-d~~~-~~p~~D~~~~~~ 263 (306)
+.+..+|||||||+|.++..++++ .+++++|+ +..++.... ..++|+++.+ |+.+ +...||+|++..
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~~~~fD~V~sd~ 156 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIPPERCDTLLCDI 156 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSCCCCCSEEEECC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCCcCCCCEEEECC
Confidence 455689999999999999999987 36889998 433332221 1267999999 9987 444699999976
Q ss_pred hhc---cCCchH-HHHHHHHHHHhcCCCCCCcEEEE
Q 021867 264 ILH---DWNDEE-CVKILKKCKEAVTSDDKKGKVII 295 (306)
Q Consensus 264 vlh---~~~d~~-~~~iL~~~~~~L~p~~~gg~lli 295 (306)
.++ ...+.. ...+|+.+++.|+| ||.+++
T Consensus 157 ~~~~g~~~~d~~~~l~~L~~~~~~Lkp---GG~~v~ 189 (305)
T 2p41_A 157 GESSPNPTVEAGRTLRVLNLVENWLSN---NTQFCV 189 (305)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHCCT---TCEEEE
T ss_pred ccccCcchhhHHHHHHHHHHHHHHhCC---CCEEEE
Confidence 653 222222 22579999999999 887776
No 225
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.81 E-value=7.7e-09 Score=91.43 Aligned_cols=101 Identities=8% Similarity=0.037 Sum_probs=74.2
Q ss_pred HHHhhchhhh-cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhcCCCeEEEe-ccCCC----CCC--C
Q 021867 185 VVIHKCKDVF-EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESDLANLKYVG-GDMFE----AIP--P 255 (306)
Q Consensus 185 ~~~~~~~~~~-~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~-~d~~~----~~p--~ 255 (306)
.+++.+. . ....+|||||||+|.++..+++. +..+++++|+ +.|++.+.+..+|+.... .|+.. ..| .
T Consensus 75 ~~l~~~~--~~~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~ 151 (291)
T 3hp7_A 75 KALAVFN--LSVEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGL 151 (291)
T ss_dssp HHHHHTT--CCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCC
T ss_pred HHHHhcC--CCccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCC
Confidence 3445554 3 24579999999999999999876 4568999999 777777443456665543 34432 133 3
Q ss_pred ccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEE
Q 021867 256 ADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 256 ~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~ 296 (306)
+|++++..++|++ ..+|+++++.|+| ||+++++
T Consensus 152 fD~v~~d~sf~sl-----~~vL~e~~rvLkp---GG~lv~l 184 (291)
T 3hp7_A 152 PSFASIDVSFISL-----NLILPALAKILVD---GGQVVAL 184 (291)
T ss_dssp CSEEEECCSSSCG-----GGTHHHHHHHSCT---TCEEEEE
T ss_pred CCEEEEEeeHhhH-----HHHHHHHHHHcCc---CCEEEEE
Confidence 8999998888754 3679999999999 8999886
No 226
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.80 E-value=5.5e-09 Score=85.33 Aligned_cols=87 Identities=9% Similarity=0.046 Sum_probs=71.5
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-cCCCeEEEeccCCC-CC---C--CccEEEehhhh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-DLANLKYVGGDMFE-AI---P--PADAVLLKWIL 265 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-~~~rv~~~~~d~~~-~~---p--~~D~~~~~~vl 265 (306)
.....+|||||||. +.+|. +.+++.|++ ...++++..+|+.+ +. + .||+|++.+++
T Consensus 10 ~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l 73 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVP 73 (176)
T ss_dssp CCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCST
T ss_pred CCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChh
Confidence 56678999999996 23787 889998887 44569999999987 44 4 49999999999
Q ss_pred ccC-CchHHHHHHHHHHHhcCCCCCCcEEEEEeeecC
Q 021867 266 HDW-NDEECVKILKKCKEAVTSDDKKGKVIIIDMIRE 301 (306)
Q Consensus 266 h~~-~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~ 301 (306)
|++ ++. ..+|++++++|+| ||++++.+....
T Consensus 74 ~~~~~~~--~~~l~~~~r~Lkp---gG~l~~~~~~~~ 105 (176)
T 2ld4_A 74 GSTTLHS--AEILAEIARILRP---GGCLFLKEPVET 105 (176)
T ss_dssp TCCCCCC--HHHHHHHHHHEEE---EEEEEEEEEEES
T ss_pred hhcccCH--HHHHHHHHHHCCC---CEEEEEEccccc
Confidence 998 665 5789999999999 999999776544
No 227
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.79 E-value=2.4e-08 Score=94.07 Aligned_cols=105 Identities=18% Similarity=0.174 Sum_probs=81.9
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCC-CeEEEecc-hHHHHhchh-----cCCCeEEEeccCCC-C--CC--CccEEEe
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPN-LECTDFDL-PHVVNGLES-----DLANLKYVGGDMFE-A--IP--PADAVLL 261 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~-~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~-~--~p--~~D~~~~ 261 (306)
.....+|||+|||+|..+..+++..++ .+++++|+ +..++.+++ ..++|+++.+|+.+ + ++ .||+|++
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEE
Confidence 455679999999999999999999887 79999999 777777665 34589999999987 3 43 4999996
Q ss_pred ------hhhhccCCch-------HH-------HHHHHHHHHhcCCCCCCcEEEEEeeecC
Q 021867 262 ------KWILHDWNDE-------EC-------VKILKKCKEAVTSDDKKGKVIIIDMIRE 301 (306)
Q Consensus 262 ------~~vlh~~~d~-------~~-------~~iL~~~~~~L~p~~~gg~lli~e~~~~ 301 (306)
..+++..++. +. ..+|+++.+.|+| ||++++.+..+.
T Consensus 337 D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lkp---GG~lvy~tcs~~ 393 (450)
T 2yxl_A 337 DAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKP---GGRLLYTTCSIF 393 (450)
T ss_dssp ECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEE---EEEEEEEESCCC
T ss_pred cCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCC---CcEEEEEeCCCC
Confidence 3445544432 11 5789999999999 899998776543
No 228
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.74 E-value=1.8e-08 Score=89.85 Aligned_cols=89 Identities=15% Similarity=0.285 Sum_probs=64.5
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCC-CCCCc
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFE-AIPPA 256 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~-~~p~~ 256 (306)
..+++... .....+|||||||+|.++..++++ ..+++++|+ +.+++.+++ ..++++++.+|+.+ +.+.+
T Consensus 32 ~~i~~~~~--~~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~ 107 (299)
T 2h1r_A 32 DKIIYAAK--IKSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFPKF 107 (299)
T ss_dssp HHHHHHHC--CCTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCCCC
T ss_pred HHHHHhcC--CCCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcccC
Confidence 33444444 456689999999999999999987 458999999 888888776 23789999999988 66689
Q ss_pred cEEEehhhhccCCchHHHHHH
Q 021867 257 DAVLLKWILHDWNDEECVKIL 277 (306)
Q Consensus 257 D~~~~~~vlh~~~d~~~~~iL 277 (306)
|+|++.- .++|+.+....+|
T Consensus 108 D~Vv~n~-py~~~~~~~~~ll 127 (299)
T 2h1r_A 108 DVCTANI-PYKISSPLIFKLI 127 (299)
T ss_dssp SEEEEEC-CGGGHHHHHHHHH
T ss_pred CEEEEcC-CcccccHHHHHHH
Confidence 9988754 4457776666666
No 229
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.73 E-value=1.5e-08 Score=92.09 Aligned_cols=99 Identities=11% Similarity=0.177 Sum_probs=80.5
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCC-----CeEEEecc-hHHHHhchh----cCCCeEEEeccCCCCCC--CccEEEehh
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFPN-----LECTDFDL-PHVVNGLES----DLANLKYVGGDMFEAIP--PADAVLLKW 263 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p~-----~~~~~~Dl-~~~~~~a~~----~~~rv~~~~~d~~~~~p--~~D~~~~~~ 263 (306)
...+|+|+|||+|.++..+++..+. .+++++|+ +.+++.|+. ..-++.+..+|.+++.+ .||+|+..-
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~~~~~fD~Ii~NP 209 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISDL 209 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCCCCCCEEEEEEEC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCccccCCccEEEECC
Confidence 4579999999999999999998875 68999999 888888776 22378999999998543 599999988
Q ss_pred hhccCCchHH----------------HHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 264 ILHDWNDEEC----------------VKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 264 vlh~~~d~~~----------------~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
.++.++.++. ..+++++.+.|+| ||+++++-
T Consensus 210 Pfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~---gG~~~~v~ 256 (344)
T 2f8l_A 210 PVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKP---GGYLFFLV 256 (344)
T ss_dssp CCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEE---EEEEEEEE
T ss_pred CCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCC---CCEEEEEE
Confidence 8776654432 2589999999999 89888775
No 230
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.71 E-value=4e-08 Score=84.95 Aligned_cols=85 Identities=12% Similarity=0.278 Sum_probs=64.0
Q ss_pred HHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh---cCCCeEEEeccCCC-CCC-Cc
Q 021867 183 TRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES---DLANLKYVGGDMFE-AIP-PA 256 (306)
Q Consensus 183 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~---~~~rv~~~~~d~~~-~~p-~~ 256 (306)
...+++... .....+|||||||+|.++..++++. .+++++|+ +.+++.+++ ..++++++.+|+.+ +.+ +.
T Consensus 19 ~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~ 94 (244)
T 1qam_A 19 IDKIMTNIR--LNEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQ 94 (244)
T ss_dssp HHHHHTTCC--CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSC
T ss_pred HHHHHHhCC--CCCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCC
Confidence 344555554 4567899999999999999999986 68999999 888888876 23689999999988 665 34
Q ss_pred cEEEehhhhccCCch
Q 021867 257 DAVLLKWILHDWNDE 271 (306)
Q Consensus 257 D~~~~~~vlh~~~d~ 271 (306)
++.++++.-++++.+
T Consensus 95 ~~~vv~nlPy~~~~~ 109 (244)
T 1qam_A 95 SYKIFGNIPYNISTD 109 (244)
T ss_dssp CCEEEEECCGGGHHH
T ss_pred CeEEEEeCCcccCHH
Confidence 445666665555443
No 231
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.71 E-value=2.9e-08 Score=85.14 Aligned_cols=90 Identities=11% Similarity=0.070 Sum_probs=62.0
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhcCCCeEEE--------e-ccCCCCCCCccEEEehhhh
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESDLANLKYV--------G-GDMFEAIPPADAVLLKWIL 265 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~--------~-~d~~~~~p~~D~~~~~~vl 265 (306)
...+|||||||+|.++..+++.. ..+++++|+ +.+++.+.+..+++... . .|+..+. +|.+.+..++
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g-~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~D~v~ 113 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNG-AKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGR--PSFTSIDVSF 113 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCC--CSEEEECCSS
T ss_pred CCCEEEEEccCCCHHHHHHHhcC-CCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCC--CCEEEEEEEh
Confidence 45699999999999999999873 348999999 77777766544444332 2 2222211 3444444343
Q ss_pred ccCCchHHHHHHHHHHHhcCCCCCCcEEEEE
Q 021867 266 HDWNDEECVKILKKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 266 h~~~d~~~~~iL~~~~~~L~p~~~gg~lli~ 296 (306)
..+ ..+|++++++|+| ||+++++
T Consensus 114 ~~l-----~~~l~~i~rvLkp---gG~lv~~ 136 (232)
T 3opn_A 114 ISL-----DLILPPLYEILEK---NGEVAAL 136 (232)
T ss_dssp SCG-----GGTHHHHHHHSCT---TCEEEEE
T ss_pred hhH-----HHHHHHHHHhccC---CCEEEEE
Confidence 333 4689999999999 8999885
No 232
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.65 E-value=6.9e-08 Score=87.24 Aligned_cols=98 Identities=14% Similarity=0.129 Sum_probs=74.3
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCC-CeEEEeccCCCC-------CCCccEEE
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLA-NLKYVGGDMFEA-------IPPADAVL 260 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~-rv~~~~~d~~~~-------~p~~D~~~ 260 (306)
+..+|||+|||+|.++..+++... +++++|+ +.+++.|++ ..+ +++++.+|+++. ...||+|+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga--~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGA--EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCcEEEcccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 457999999999999999998644 8999999 888888876 233 599999999872 12599999
Q ss_pred ehhhh---------ccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 261 LKWIL---------HDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 261 ~~~vl---------h~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
+.-.. +++ .+....+++++.+.|+| ||.+++....
T Consensus 231 ~dPP~~~~~~~~~~~~~-~~~~~~ll~~~~~~Lkp---gG~lli~~~~ 274 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQL-FDHLPLMLDICREILSP---KALGLVLTAY 274 (332)
T ss_dssp ECCCSEEECTTCCEEEH-HHHHHHHHHHHHHTBCT---TCCEEEEEEC
T ss_pred ECCccccCCchHHHHHH-HHHHHHHHHHHHHhcCc---CcEEEEEECC
Confidence 84321 111 12346889999999999 8887765543
No 233
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.65 E-value=6.1e-08 Score=90.12 Aligned_cols=96 Identities=10% Similarity=0.038 Sum_probs=73.0
Q ss_pred CCCeEEEecCCccHHHHHHHHHC-CCCeEEEecc-hHHHHhchhcCCCeEEEeccCCCCC--CCccEEEehhhhcc----
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAF-PNLECTDFDL-PHVVNGLESDLANLKYVGGDMFEAI--PPADAVLLKWILHD---- 267 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~~~--p~~D~~~~~~vlh~---- 267 (306)
...+|||+|||+|.++..+++++ +..+++++|+ +.+++.| .+++++.+|+++.. ..||+|++.=....
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----~~~~~~~~D~~~~~~~~~fD~Ii~NPPy~~~~~~ 114 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----PWAEGILADFLLWEPGEAFDLILGNPPYGIVGEA 114 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----TTEEEEESCGGGCCCSSCEEEEEECCCCCCBSCT
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----CCCcEEeCChhhcCccCCCCEEEECcCccCcccc
Confidence 45699999999999999999987 6789999999 6665555 68999999998843 26999999422211
Q ss_pred ------CCchH-----------------HHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 268 ------WNDEE-----------------CVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 268 ------~~d~~-----------------~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
.+++. ...+++++.+.|+| ||+++++-+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~---~G~~~~i~p 165 (421)
T 2ih2_A 115 SKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKP---GGVLVFVVP 165 (421)
T ss_dssp TTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEE---EEEEEEEEE
T ss_pred cccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCC---CCEEEEEEC
Confidence 22221 12679999999999 898887654
No 234
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.64 E-value=1.8e-07 Score=78.17 Aligned_cols=89 Identities=18% Similarity=0.120 Sum_probs=71.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhc----CCCeEEEeccCCCCCCCccEEEehhhhccCC
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESD----LANLKYVGGDMFEAIPPADAVLLKWILHDWN 269 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~----~~rv~~~~~d~~~~~p~~D~~~~~~vlh~~~ 269 (306)
....+|||+|||+|.++..+++..+ .+++++|+ +.+++.+++. .-+++++.+|+.+-...+|+|++.-.+|.+.
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~D~v~~~~p~~~~~ 126 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGA-KEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFNSRVDIVIMNPPFGSQR 126 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCCCCCSEEEECCCCSSSS
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcCCCCCEEEEcCCCcccc
Confidence 3567999999999999999998743 47999999 8888888761 1189999999988323699999999988877
Q ss_pred chHHHHHHHHHHHhc
Q 021867 270 DEECVKILKKCKEAV 284 (306)
Q Consensus 270 d~~~~~iL~~~~~~L 284 (306)
......+++++.+.+
T Consensus 127 ~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 127 KHADRPFLLKAFEIS 141 (207)
T ss_dssp TTTTHHHHHHHHHHC
T ss_pred CCchHHHHHHHHHhc
Confidence 544467888888877
No 235
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.64 E-value=1.6e-07 Score=88.93 Aligned_cols=102 Identities=17% Similarity=0.249 Sum_probs=78.8
Q ss_pred CCCeEEEecCCccHHHHHHHHHCC-CCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCC-C--CC-CccEEEeh--
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFP-NLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFE-A--IP-PADAVLLK-- 262 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~-~--~p-~~D~~~~~-- 262 (306)
...+|||+|||+|..+..+++..+ ..+++++|+ +..++.+++ ...+|+++.+|+.+ + .+ .||+|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 568999999999999999999875 478999999 777877765 34689999999987 3 34 59999972
Q ss_pred ----hhh-------ccCCchH-------HHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 263 ----WIL-------HDWNDEE-------CVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 263 ----~vl-------h~~~d~~-------~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
-++ +.|+.++ ..++|+++.+.|+| ||+|++....+
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lkp---GG~LvysTcs~ 249 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRP---GGTLVYSTCTL 249 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEESCC
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCC---CCEEEEecccC
Confidence 122 2344332 24789999999999 89988866543
No 236
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.63 E-value=6e-08 Score=90.73 Aligned_cols=104 Identities=13% Similarity=0.131 Sum_probs=79.6
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh----cCCCeEEEeccCCCC---CC--CccEEEe--
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES----DLANLKYVGGDMFEA---IP--PADAVLL-- 261 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~----~~~rv~~~~~d~~~~---~p--~~D~~~~-- 261 (306)
.....+|||+|||+|..+..+++..|+.+++++|+ +..++.+++ ..-+++++.+|+.+. ++ .||+|++
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeC
Confidence 34567999999999999999999999889999999 666776665 233589999999873 33 4999986
Q ss_pred ----hhhhccCCc-------hHH-------HHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 262 ----KWILHDWND-------EEC-------VKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 262 ----~~vlh~~~d-------~~~-------~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
..+++..++ ++. ..+|+++.+.|+| ||++++.+..+
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~Lkp---GG~lvystcs~ 377 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT---GGTLVYATCSV 377 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEE---EEEEEEEESCC
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCC---CCEEEEEECCC
Confidence 234443333 221 4789999999999 89999877544
No 237
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.61 E-value=4.3e-08 Score=92.21 Aligned_cols=102 Identities=14% Similarity=0.105 Sum_probs=77.9
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCC-CeEEEecc-hHHHHhchh-----cCCCeEEEeccCCC-C--CC-CccEEEe-
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPN-LECTDFDL-PHVVNGLES-----DLANLKYVGGDMFE-A--IP-PADAVLL- 261 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~-~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~-~--~p-~~D~~~~- 261 (306)
.....+|||+|||+|..+..+++..++ .+++++|+ +.+++.+++ ... |+++.+|+.+ + .+ .||+|++
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~~FD~Il~D 177 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGTYFHRVLLD 177 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCSCEEEEEEE
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccccCCEEEEC
Confidence 456789999999999999999999876 68999999 788887776 344 9999999876 2 23 5999996
Q ss_pred ------------hhhhccCCchHH-------HHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 262 ------------KWILHDWNDEEC-------VKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 262 ------------~~vlh~~~d~~~-------~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
..+...|+.++. ..+|+++.+.|+| ||+|+.....
T Consensus 178 ~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp---GG~LvysTCs 231 (464)
T 3m6w_A 178 APCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGP---GGVLVYSTCT 231 (464)
T ss_dssp CCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEE---EEEEEEEESC
T ss_pred CCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC---CcEEEEEecc
Confidence 222233444332 6789999999999 8888875543
No 238
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.60 E-value=6.8e-08 Score=84.92 Aligned_cols=98 Identities=15% Similarity=0.117 Sum_probs=77.5
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCCCC--CCccEEEehhh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFEAI--PPADAVLLKWI 264 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~~~--p~~D~~~~~~v 264 (306)
.....+|||+|||+|.++..+++.. ..+++++|+ |..++.+++ ..++|++..+|.++-. ..||.|++...
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p 201 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCC
Confidence 3567899999999999999999774 568999999 888888776 5788999999998832 25999887532
Q ss_pred hccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecC
Q 021867 265 LHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRE 301 (306)
Q Consensus 265 lh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~ 301 (306)
. . +..+|..+.+.|++ ||.|.+.+.+-.
T Consensus 202 ~----~--~~~~l~~a~~~lk~---gG~ih~~~~~~e 229 (278)
T 3k6r_A 202 V----R--THEFIPKALSIAKD---GAIIHYHNTVPE 229 (278)
T ss_dssp S----S--GGGGHHHHHHHEEE---EEEEEEEEEEEG
T ss_pred C----c--HHHHHHHHHHHcCC---CCEEEEEeeecc
Confidence 1 1 24678889999999 898888776643
No 239
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.59 E-value=6.2e-08 Score=88.98 Aligned_cols=90 Identities=17% Similarity=0.114 Sum_probs=71.0
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCC-CCC--CccEEEehhh
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFE-AIP--PADAVLLKWI 264 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~-~~p--~~D~~~~~~v 264 (306)
.+..+|||+|||+|.++..++...+..+++++|+ +.+++.|++ ..++|++..+|+.+ +.+ .+|+|++.-.
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npP 295 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLP 295 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECC
T ss_pred CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCC
Confidence 5668999999999999999999988778999999 889988887 23689999999998 544 5999999655
Q ss_pred hccCC-----chH-HHHHHHHHHHhc
Q 021867 265 LHDWN-----DEE-CVKILKKCKEAV 284 (306)
Q Consensus 265 lh~~~-----d~~-~~~iL~~~~~~L 284 (306)
.+... -++ -..+++.+++.|
T Consensus 296 yg~r~~~~~~~~~ly~~~~~~l~r~l 321 (373)
T 3tm4_A 296 YGLKIGKKSMIPDLYMKFFNELAKVL 321 (373)
T ss_dssp CC------CCHHHHHHHHHHHHHHHE
T ss_pred CCcccCcchhHHHHHHHHHHHHHHHc
Confidence 44321 111 256889999989
No 240
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.58 E-value=1.3e-08 Score=87.91 Aligned_cols=106 Identities=14% Similarity=0.237 Sum_probs=74.6
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh---cCCCeEEEeccCCC-CCCC-cc
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES---DLANLKYVGGDMFE-AIPP-AD 257 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~---~~~rv~~~~~d~~~-~~p~-~D 257 (306)
..+++.+. .....+|||||||+|.++..+++.. .+++++|+ +.+++.+++ ..++++++.+|+.+ +.+. ..
T Consensus 19 ~~i~~~~~--~~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~ 94 (245)
T 1yub_A 19 NQIIKQLN--LKETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQR 94 (245)
T ss_dssp HHHHHHCC--CCSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSE
T ss_pred HHHHHhcC--CCCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCC
Confidence 44555555 4567899999999999999999985 78999999 778887775 24689999999988 5542 22
Q ss_pred EEEehhhhccCCchHHHHHH--------------HHHHHhcCCCCCCcEEEEE
Q 021867 258 AVLLKWILHDWNDEECVKIL--------------KKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 258 ~~~~~~vlh~~~d~~~~~iL--------------~~~~~~L~p~~~gg~lli~ 296 (306)
+.++++.-++.+.+....++ +.+.+.|+| ||++.++
T Consensus 95 f~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~---~G~l~v~ 144 (245)
T 1yub_A 95 YKIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDI---HRTLGLL 144 (245)
T ss_dssp EEEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCG---GGSHHHH
T ss_pred cEEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCC---CCchhhh
Confidence 24445544444433333333 568888998 7877654
No 241
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.53 E-value=1.7e-07 Score=84.89 Aligned_cols=94 Identities=18% Similarity=0.194 Sum_probs=75.3
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCCCeEEEeccCCCCCCCccEEEehhhhcc
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLANLKYVGGDMFEAIPPADAVLLKWILHD 267 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~~~p~~D~~~~~~vlh~ 267 (306)
....+|||+|||+|.++.. ++ +..+++++|+ +.+++.+++ ..++++++.+|+++....||+|++.-.-
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~~~fD~Vi~dpP~-- 268 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVDVKGNRVIMNLPK-- 268 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCCCCEEEEEECCTT--
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhcCCCcEEEECCcH--
Confidence 4568999999999999999 76 4678999999 888888876 2468999999998844569999984211
Q ss_pred CCchHHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 268 WNDEECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 268 ~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
....+++.+.+.|+| ||.+++.+...
T Consensus 269 ----~~~~~l~~~~~~L~~---gG~l~~~~~~~ 294 (336)
T 2yx1_A 269 ----FAHKFIDKALDIVEE---GGVIHYYTIGK 294 (336)
T ss_dssp ----TGGGGHHHHHHHEEE---EEEEEEEEEES
T ss_pred ----hHHHHHHHHHHHcCC---CCEEEEEEeec
Confidence 123789999999999 88888877653
No 242
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.51 E-value=3.2e-07 Score=84.72 Aligned_cols=113 Identities=10% Similarity=0.034 Sum_probs=80.9
Q ss_pred HHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCC--------------------------------------CeEE
Q 021867 183 TRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPN--------------------------------------LECT 224 (306)
Q Consensus 183 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~--------------------------------------~~~~ 224 (306)
+..++.... +.+...|||.+||+|.++++.+....+ .+++
T Consensus 190 Aa~ll~l~~--~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~ 267 (393)
T 3k0b_A 190 AAALVLLTS--WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNII 267 (393)
T ss_dssp HHHHHHHSC--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEE
T ss_pred HHHHHHHhC--CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEE
Confidence 344444444 456789999999999999998876554 5799
Q ss_pred Eecc-hHHHHhchh------cCCCeEEEeccCCC-CCC-CccEEEehhhhccC-C-chHHHHHHHHHHHhcCCCCCCcEE
Q 021867 225 DFDL-PHVVNGLES------DLANLKYVGGDMFE-AIP-PADAVLLKWILHDW-N-DEECVKILKKCKEAVTSDDKKGKV 293 (306)
Q Consensus 225 ~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~-~~p-~~D~~~~~~vlh~~-~-d~~~~~iL~~~~~~L~p~~~gg~l 293 (306)
++|+ +.+++.|++ ..++|+++.+|+++ +.+ .+|+|++.=..+.. . +++...+.+.+.+.|++ -+|+++
T Consensus 268 GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~-~~g~~~ 346 (393)
T 3k0b_A 268 GGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKR-MPTWSV 346 (393)
T ss_dssp EEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHT-CTTCEE
T ss_pred EEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhc-CCCCEE
Confidence 9999 889998886 35679999999998 444 59999987443321 1 24455666766666654 237888
Q ss_pred EEEee
Q 021867 294 IIIDM 298 (306)
Q Consensus 294 li~e~ 298 (306)
.|+..
T Consensus 347 ~iit~ 351 (393)
T 3k0b_A 347 YVLTS 351 (393)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 87653
No 243
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.50 E-value=3.3e-07 Score=81.32 Aligned_cols=89 Identities=11% Similarity=0.201 Sum_probs=66.5
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh---cCCCeEEEeccCCC-CCC--Cc
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES---DLANLKYVGGDMFE-AIP--PA 256 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~---~~~rv~~~~~d~~~-~~p--~~ 256 (306)
..+++... .....+|||||||+|.++..|+++ ..+++++|+ +.+++.+++ ..++++++.+|+.+ +++ .+
T Consensus 40 ~~Iv~~l~--~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~f 115 (295)
T 3gru_A 40 NKAVESAN--LTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLDF 115 (295)
T ss_dssp HHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSCC
T ss_pred HHHHHhcC--CCCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCCc
Confidence 44555554 456789999999999999999998 468999999 788888776 35799999999998 665 38
Q ss_pred cEEEehhhhccCCchHHHHHH
Q 021867 257 DAVLLKWILHDWNDEECVKIL 277 (306)
Q Consensus 257 D~~~~~~vlh~~~d~~~~~iL 277 (306)
|+|+.+-.. +++.+...++|
T Consensus 116 D~Iv~NlPy-~is~pil~~lL 135 (295)
T 3gru_A 116 NKVVANLPY-QISSPITFKLI 135 (295)
T ss_dssp SEEEEECCG-GGHHHHHHHHH
T ss_pred cEEEEeCcc-cccHHHHHHHH
Confidence 988865443 45544333444
No 244
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.49 E-value=1.1e-06 Score=80.95 Aligned_cols=113 Identities=15% Similarity=0.069 Sum_probs=83.6
Q ss_pred HHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCC--------------------------------------CeEE
Q 021867 183 TRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPN--------------------------------------LECT 224 (306)
Q Consensus 183 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~--------------------------------------~~~~ 224 (306)
+..++.... +.+...|+|.+||+|.++++.+....+ .+++
T Consensus 183 Aaall~l~~--~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~ 260 (384)
T 3ldg_A 183 AAAIILLSN--WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDIS 260 (384)
T ss_dssp HHHHHHHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEE
T ss_pred HHHHHHHhC--CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEE
Confidence 344444444 566789999999999999998876554 5699
Q ss_pred Eecc-hHHHHhchh------cCCCeEEEeccCCC-CCC-CccEEEehhhhcc-CC-chHHHHHHHHHHHhcCCCCCCcEE
Q 021867 225 DFDL-PHVVNGLES------DLANLKYVGGDMFE-AIP-PADAVLLKWILHD-WN-DEECVKILKKCKEAVTSDDKKGKV 293 (306)
Q Consensus 225 ~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~-~~p-~~D~~~~~~vlh~-~~-d~~~~~iL~~~~~~L~p~~~gg~l 293 (306)
++|+ +.+++.|++ ..++|++..+|+++ +.+ .+|+|++.=..+. .. .++...+.+.+.+.|++ -+|+++
T Consensus 261 GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~-~~g~~~ 339 (384)
T 3ldg_A 261 GFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAP-LKTWSQ 339 (384)
T ss_dssp EEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTT-CTTSEE
T ss_pred EEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhh-CCCcEE
Confidence 9999 889998886 45689999999998 444 5999998755432 22 35566778888888875 347888
Q ss_pred EEEee
Q 021867 294 IIIDM 298 (306)
Q Consensus 294 li~e~ 298 (306)
.|+..
T Consensus 340 ~iit~ 344 (384)
T 3ldg_A 340 FILTN 344 (384)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 87754
No 245
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.48 E-value=1.2e-07 Score=87.79 Aligned_cols=99 Identities=18% Similarity=0.139 Sum_probs=75.7
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----c-CCCeEEEeccCCCC--C----C-CccEEEe
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----D-LANLKYVGGDMFEA--I----P-PADAVLL 261 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~-~~rv~~~~~d~~~~--~----p-~~D~~~~ 261 (306)
+..+|||+|||+|.++..+++. +..+++++|+ +.+++.|++ . .++++++.+|+++. . . .||+|++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 5689999999999999999986 4458999999 888888876 2 23899999998762 1 2 5999998
Q ss_pred hhhhccCCc-------hHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 262 KWILHDWND-------EECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 262 ~~vlh~~~d-------~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
.-..+..+. .....+++++.+.|+| ||.++++..
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~lv~~~~ 336 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKD---GGILVTCSC 336 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEE---EEEEEEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC---CcEEEEEEC
Confidence 432221111 3456789999999999 888887754
No 246
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.45 E-value=2.8e-07 Score=84.80 Aligned_cols=99 Identities=15% Similarity=0.111 Sum_probs=75.9
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCCCC------C-CccEEEeh
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFEAI------P-PADAVLLK 262 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~~~------p-~~D~~~~~ 262 (306)
...+|||+|||+|.++..+++. ..+++++|+ +.+++.|++ ..++++++.+|+++.. + .||+|++.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 5679999999999999999988 568999999 888888876 2345999999987621 2 59999984
Q ss_pred hhhccCCc-------hHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 263 WILHDWND-------EECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 263 ~vlh~~~d-------~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
-.-...+. +....+++.+.+.|+| ||.+++....
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~ 327 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKE---GGILATASCS 327 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEE---EEEEEEEECC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCC---CCEEEEEECC
Confidence 32211111 3446789999999999 8888887543
No 247
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.44 E-value=1.7e-07 Score=88.00 Aligned_cols=103 Identities=15% Similarity=0.193 Sum_probs=77.1
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCC-CeEEEecc-hHHHHhchh-----cCCCeEEEeccCCC-C--CC-CccEEEeh
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPN-LECTDFDL-PHVVNGLES-----DLANLKYVGGDMFE-A--IP-PADAVLLK 262 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~-~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~-~--~p-~~D~~~~~ 262 (306)
.....+|||+|||+|..+..+++..++ .+++++|+ +..++.+++ ...+|++..+|..+ + .+ .||+|++.
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~D 182 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVD 182 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEEC
Confidence 455789999999999999999998764 68999999 777777765 45679999999876 2 33 59999873
Q ss_pred hh------h-------ccCCchH-------HHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 263 WI------L-------HDWNDEE-------CVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 263 ~v------l-------h~~~d~~-------~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
-. + ..|+.++ ...+|+++.+.|+| ||+|+.....
T Consensus 183 aPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp---GG~LvYsTCs 236 (456)
T 3m4x_A 183 APCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKN---KGQLIYSTCT 236 (456)
T ss_dssp CCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEE---EEEEEEEESC
T ss_pred CCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC---CcEEEEEEee
Confidence 21 1 2233222 13789999999999 8888876543
No 248
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.42 E-value=2.8e-07 Score=84.94 Aligned_cols=99 Identities=14% Similarity=0.097 Sum_probs=73.4
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cCC-CeEEEeccCCC--C-C---C-CccEE
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DLA-NLKYVGGDMFE--A-I---P-PADAV 259 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~~-rv~~~~~d~~~--~-~---p-~~D~~ 259 (306)
.+..+|||+|||+|.++..+++.. ..+++++|+ +.+++.|++ ..+ +++|+.+|+++ + . . .||+|
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~I 289 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDII 289 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEE
Confidence 456799999999999999999863 238999999 888888886 223 89999999876 2 1 2 59999
Q ss_pred Eehhhh-----ccCCc--hHHHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 260 LLKWIL-----HDWND--EECVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 260 ~~~~vl-----h~~~d--~~~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
++.-.. +...+ .....+++.+.+.|+| ||.|++..
T Consensus 290 i~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~p---gG~l~~~~ 331 (385)
T 2b78_A 290 IIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSE---NGLIIAST 331 (385)
T ss_dssp EECCCCC-----CCCCHHHHHHHHHHHHHHTEEE---EEEEEEEE
T ss_pred EECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCC---CcEEEEEe
Confidence 984332 12222 2335678899999999 78776654
No 249
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.40 E-value=8.5e-07 Score=81.70 Aligned_cols=113 Identities=14% Similarity=0.083 Sum_probs=81.1
Q ss_pred HHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCC--------------------------------------CeEE
Q 021867 183 TRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPN--------------------------------------LECT 224 (306)
Q Consensus 183 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~--------------------------------------~~~~ 224 (306)
+..++.... +.+..+|||.+||+|.++++++....+ .+++
T Consensus 184 Aa~ll~~~~--~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~ 261 (385)
T 3ldu_A 184 AAGLIYLTP--WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIY 261 (385)
T ss_dssp HHHHHHTSC--CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEE
T ss_pred HHHHHHhhC--CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEE
Confidence 344444444 456789999999999999999876433 5799
Q ss_pred Eecc-hHHHHhchh------cCCCeEEEeccCCC-CCC-CccEEEehhhhcc-CC-chHHHHHHHHHHHhcCCCCCCcEE
Q 021867 225 DFDL-PHVVNGLES------DLANLKYVGGDMFE-AIP-PADAVLLKWILHD-WN-DEECVKILKKCKEAVTSDDKKGKV 293 (306)
Q Consensus 225 ~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~-~~p-~~D~~~~~~vlh~-~~-d~~~~~iL~~~~~~L~p~~~gg~l 293 (306)
++|+ +.+++.|+. ..++|+|..+|+.+ +.+ .+|+|++.=.... +. .++...+.+.+.+.|++ -+|+++
T Consensus 262 GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~-~~g~~~ 340 (385)
T 3ldu_A 262 GYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRK-LKNWSY 340 (385)
T ss_dssp EEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHT-SBSCEE
T ss_pred EEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhh-CCCCEE
Confidence 9999 899998887 34589999999998 444 5999998655432 22 24456677777777764 236777
Q ss_pred EEEee
Q 021867 294 IIIDM 298 (306)
Q Consensus 294 li~e~ 298 (306)
.|+..
T Consensus 341 ~iit~ 345 (385)
T 3ldu_A 341 YLITS 345 (385)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 77643
No 250
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.40 E-value=3.1e-07 Score=86.30 Aligned_cols=101 Identities=14% Similarity=0.098 Sum_probs=76.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHC-------------CCCeEEEecc-hHHHHhchh-----cCC--CeEEEeccCCC-C
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAF-------------PNLECTDFDL-PHVVNGLES-----DLA--NLKYVGGDMFE-A 252 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~-------------p~~~~~~~Dl-~~~~~~a~~-----~~~--rv~~~~~d~~~-~ 252 (306)
....+|+|.|||+|.++..+++.. +..+++++|+ +.+++.|+. ..+ ++.+..+|.+. +
T Consensus 170 ~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~ 249 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKE 249 (445)
T ss_dssp CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSC
T ss_pred CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCc
Confidence 345689999999999999988763 4567999999 888887775 222 78899999988 3
Q ss_pred CC-CccEEEehhhhccCCc--h-------------HHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 253 IP-PADAVLLKWILHDWND--E-------------ECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 253 ~p-~~D~~~~~~vlh~~~d--~-------------~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
.. .||+|+..-.++.... . ....+++++.+.|+| ||++.++-+
T Consensus 250 ~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~---gG~~a~V~p 308 (445)
T 2okc_A 250 PSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKT---GGRAAVVLP 308 (445)
T ss_dssp CSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEE---EEEEEEEEE
T ss_pred ccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhcc---CCEEEEEEC
Confidence 33 6999999766654211 1 124789999999999 899887753
No 251
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.39 E-value=2.8e-07 Score=85.24 Aligned_cols=99 Identities=11% Similarity=0.047 Sum_probs=75.1
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----c--CCCeEEEeccCCCC-------CCCccEE
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----D--LANLKYVGGDMFEA-------IPPADAV 259 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~--~~rv~~~~~d~~~~-------~p~~D~~ 259 (306)
....+|||+|||+|.++..+++.. ..+++++|+ +.+++.|++ . .++++++.+|+++. ...||+|
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~I 297 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEE
Confidence 456799999999999999999864 458999999 888888876 2 23899999999772 1259999
Q ss_pred EehhhhccCC-------chHHHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 260 LLKWILHDWN-------DEECVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 260 ~~~~vlh~~~-------d~~~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
++.-.....+ ......++.++.+.|+| ||.+++..
T Consensus 298 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~ 339 (396)
T 3c0k_A 298 VMDPPKFVENKSQLMGACRGYKDINMLAIQLLNE---GGILLTFS 339 (396)
T ss_dssp EECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEE---EEEEEEEE
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCC---CcEEEEEe
Confidence 9853221110 13456889999999999 78877754
No 252
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.38 E-value=5.8e-07 Score=79.47 Aligned_cols=93 Identities=14% Similarity=0.119 Sum_probs=67.8
Q ss_pred hcCCCeEEEecCCc------cHHHHHHHHHCC-CCeEEEecchHHHHhchhcCCCeEE-EeccCCC-CCC-CccEEEehh
Q 021867 194 FEGLNSLVDVGGGI------GTVAKAIAKAFP-NLECTDFDLPHVVNGLESDLANLKY-VGGDMFE-AIP-PADAVLLKW 263 (306)
Q Consensus 194 ~~~~~~vlDvGgG~------G~~~~~l~~~~p-~~~~~~~Dl~~~~~~a~~~~~rv~~-~~~d~~~-~~p-~~D~~~~~~ 263 (306)
+....+|||+|||+ |. ..+++..| +.+++++|+.+. .++|++ +.+|+.+ +.+ .||+|++..
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------v~~v~~~i~gD~~~~~~~~~fD~Vvsn~ 131 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------VSDADSTLIGDCATVHTANKWDLIISDM 131 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------BCSSSEEEESCGGGCCCSSCEEEEEECC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------CCCCEEEEECccccCCccCcccEEEEcC
Confidence 45677999999944 76 55677777 689999999443 147899 9999988 444 599999864
Q ss_pred hhcc---C------CchHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 264 ILHD---W------NDEECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 264 vlh~---~------~d~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
..+. + ..+....+|+.+++.|+| ||++++...
T Consensus 132 ~~~~~g~~~~d~~~~~~l~~~~l~~a~r~Lkp---GG~~v~~~~ 172 (290)
T 2xyq_A 132 YDPRTKHVTKENDSKEGFFTYLCGFIKQKLAL---GGSIAVKIT 172 (290)
T ss_dssp CCCC---CCSCCCCCCTHHHHHHHHHHHHEEE---EEEEEEEEC
T ss_pred CccccccccccccchHHHHHHHHHHHHHhcCC---CcEEEEEEe
Confidence 3221 0 112345789999999999 899988654
No 253
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.38 E-value=5.6e-07 Score=80.07 Aligned_cols=77 Identities=22% Similarity=0.227 Sum_probs=61.6
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh----cCCCeEEEeccCCC-C--C--
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES----DLANLKYVGGDMFE-A--I-- 253 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~----~~~rv~~~~~d~~~-~--~-- 253 (306)
..+++.+. .....+|||+|||+|.++..+++++|+.+++++|. +.+++.|++ ..++++++.+|+.+ + .
T Consensus 16 ~e~l~~L~--~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~ 93 (301)
T 1m6y_A 16 REVIEFLK--PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKT 93 (301)
T ss_dssp HHHHHHHC--CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHH
T ss_pred HHHHHhcC--CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHh
Confidence 44444444 45567999999999999999999999889999999 889998886 22799999999876 2 1
Q ss_pred ---CCccEEEeh
Q 021867 254 ---PPADAVLLK 262 (306)
Q Consensus 254 ---p~~D~~~~~ 262 (306)
..+|.|++.
T Consensus 94 ~g~~~~D~Vl~D 105 (301)
T 1m6y_A 94 LGIEKVDGILMD 105 (301)
T ss_dssp TTCSCEEEEEEE
T ss_pred cCCCCCCEEEEc
Confidence 358988863
No 254
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.37 E-value=9.1e-07 Score=76.59 Aligned_cols=85 Identities=19% Similarity=0.282 Sum_probs=64.2
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-cCCCeEEEeccCCC-CCCC-c-cE
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-DLANLKYVGGDMFE-AIPP-A-DA 258 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-~~~rv~~~~~d~~~-~~p~-~-D~ 258 (306)
..+++... .....+|||||||+|.++..++++ +..+++++|+ +.+++.+++ ...+++++.+|+.+ +++. + ++
T Consensus 21 ~~iv~~~~--~~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~ 97 (249)
T 3ftd_A 21 KKIAEELN--IEEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFCSLGKEL 97 (249)
T ss_dssp HHHHHHTT--CCTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGGSCSSE
T ss_pred HHHHHhcC--CCCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhHccCCc
Confidence 44555554 456779999999999999999987 4578999999 888888875 34689999999998 5553 1 45
Q ss_pred EEehhhhccCCch
Q 021867 259 VLLKWILHDWNDE 271 (306)
Q Consensus 259 ~~~~~vlh~~~d~ 271 (306)
.++.+.-++.+.+
T Consensus 98 ~vv~NlPy~i~~~ 110 (249)
T 3ftd_A 98 KVVGNLPYNVASL 110 (249)
T ss_dssp EEEEECCTTTHHH
T ss_pred EEEEECchhccHH
Confidence 6777766665544
No 255
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.35 E-value=2.3e-06 Score=80.09 Aligned_cols=85 Identities=15% Similarity=0.247 Sum_probs=62.6
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCCCC-----C--CccEEE
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFEAI-----P--PADAVL 260 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~~~-----p--~~D~~~ 260 (306)
..+..+|||+|||+|.++..+++. ..+++++|+ +.+++.|++ ..++++|+.+|+.+.. + .||+|+
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv 361 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVL 361 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEE
T ss_pred CCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEE
Confidence 345679999999999999999987 568999999 888888876 3458999999998732 1 489998
Q ss_pred ehhhhccCCchHHHHHHHHHHHhcCC
Q 021867 261 LKWILHDWNDEECVKILKKCKEAVTS 286 (306)
Q Consensus 261 ~~~vlh~~~d~~~~~iL~~~~~~L~p 286 (306)
+. -|...+..+++.+.+ ++|
T Consensus 362 ~d-----PPr~g~~~~~~~l~~-~~p 381 (433)
T 1uwv_A 362 LD-----PARAGAAGVMQQIIK-LEP 381 (433)
T ss_dssp EC-----CCTTCCHHHHHHHHH-HCC
T ss_pred EC-----CCCccHHHHHHHHHh-cCC
Confidence 73 222212234555543 677
No 256
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.34 E-value=1.4e-06 Score=76.24 Aligned_cols=90 Identities=18% Similarity=0.182 Sum_probs=66.4
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh--cCCCeEEEeccCCC-CCC---Cc
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES--DLANLKYVGGDMFE-AIP---PA 256 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~--~~~rv~~~~~d~~~-~~p---~~ 256 (306)
..+++... .... +|||||||+|.++..|+++. .+++++|+ +.+++.+++ ..++++++.+|+.+ +++ .+
T Consensus 37 ~~Iv~~~~--~~~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~~ 111 (271)
T 3fut_A 37 RRIVEAAR--PFTG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQG 111 (271)
T ss_dssp HHHHHHHC--CCCS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCTT
T ss_pred HHHHHhcC--CCCC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccCc
Confidence 33444444 4445 99999999999999999985 57899999 888888876 34689999999988 554 35
Q ss_pred cEEEehhhhccCCchHHHHHHHH
Q 021867 257 DAVLLKWILHDWNDEECVKILKK 279 (306)
Q Consensus 257 D~~~~~~vlh~~~d~~~~~iL~~ 279 (306)
|. ++.|.-++.+.+...++|..
T Consensus 112 ~~-iv~NlPy~iss~il~~ll~~ 133 (271)
T 3fut_A 112 SL-LVANLPYHIATPLVTRLLKT 133 (271)
T ss_dssp EE-EEEEECSSCCHHHHHHHHHH
T ss_pred cE-EEecCcccccHHHHHHHhcC
Confidence 54 55666667777655555544
No 257
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.34 E-value=7.5e-07 Score=80.71 Aligned_cols=98 Identities=16% Similarity=0.118 Sum_probs=71.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-cC------------CCeEEEeccCCC--C-----C
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-DL------------ANLKYVGGDMFE--A-----I 253 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-~~------------~rv~~~~~d~~~--~-----~ 253 (306)
+++++|||||||.|..+.++++..+ .+++.+|+ +.+++.|++ .. +|++++.+|.++ . .
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 4678999999999999999998765 78999999 899999887 11 289999999887 2 1
Q ss_pred CCccEEEehhhh-ccCCch---HHHHHHHHH----HHhcCCCCCCcEEEEE
Q 021867 254 PPADAVLLKWIL-HDWNDE---ECVKILKKC----KEAVTSDDKKGKVIII 296 (306)
Q Consensus 254 p~~D~~~~~~vl-h~~~d~---~~~~iL~~~----~~~L~p~~~gg~lli~ 296 (306)
..||+|++--.- ..-..+ -...+++.+ +++|+| ||.+++.
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~p---gGilv~q 313 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQ---DGKYFTQ 313 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEE---EEEEEEE
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCC---CcEEEEE
Confidence 259999986422 100001 123455665 899999 7777654
No 258
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.28 E-value=1.4e-06 Score=80.49 Aligned_cols=100 Identities=14% Similarity=0.076 Sum_probs=71.9
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh----cCCCeEEEeccCCCC---CC-CccEEEehhhhc
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES----DLANLKYVGGDMFEA---IP-PADAVLLKWILH 266 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~----~~~rv~~~~~d~~~~---~p-~~D~~~~~~vlh 266 (306)
...+|||+|||+|.++..+++.. .+++++|+ +.+++.|++ ..-..++..+|+++. .+ .||+|++.-...
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~g--a~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f 291 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKG--AYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTL 291 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCC
T ss_pred CCCeEEEcccchhHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcC
Confidence 47899999999999999999874 44999999 888888876 111134668898772 22 499999853321
Q ss_pred cCCc-------hHHHHHHHHHHHhcCCCCCCcEEEEEeeec
Q 021867 267 DWND-------EECVKILKKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 267 ~~~d-------~~~~~iL~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
..+. ..-..+++.+.+.|+| ||+|+++....
T Consensus 292 ~~~~~~~~~~~~~~~~ll~~a~~~Lkp---GG~Lv~~s~s~ 329 (393)
T 4dmg_A 292 VKRPEELPAMKRHLVDLVREALRLLAE---EGFLWLSSCSY 329 (393)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHHTEEE---EEEEEEEECCT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCC---CCEEEEEECCC
Confidence 1111 2235789999999999 89988776543
No 259
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.28 E-value=4.8e-06 Score=77.60 Aligned_cols=91 Identities=14% Similarity=0.151 Sum_probs=66.9
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCCCCC-CccEEEehhhhcc
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFEAIP-PADAVLLKWILHD 267 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~~~p-~~D~~~~~~vlh~ 267 (306)
.+..+|||+|||+|.++..+++. ..+++++|. +.+++.|++ ..+ ++|+.+|+.+..+ .||+|++.-.-..
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~~~fD~Vv~dPPr~g 365 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSVKGFDTVIVDPPRAG 365 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCCTTCSEEEECCCTTC
T ss_pred CCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCccCCCEEEEcCCccc
Confidence 45679999999999999999986 358999999 888888876 234 9999999998444 6999998433211
Q ss_pred CCchHHHHHHHHHHHhcCCCCCCcEEEEE
Q 021867 268 WNDEECVKILKKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 268 ~~d~~~~~iL~~~~~~L~p~~~gg~lli~ 296 (306)
.. ..+++.++ .|+| +|.+++.
T Consensus 366 ~~----~~~~~~l~-~l~p---~givyvs 386 (425)
T 2jjq_A 366 LH----PRLVKRLN-REKP---GVIVYVS 386 (425)
T ss_dssp SC----HHHHHHHH-HHCC---SEEEEEE
T ss_pred hH----HHHHHHHH-hcCC---CcEEEEE
Confidence 11 13455554 4888 6776664
No 260
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.27 E-value=1.8e-06 Score=76.08 Aligned_cols=99 Identities=16% Similarity=0.165 Sum_probs=76.3
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh----------cCCCeEEEeccCCCCC----CCccEE
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES----------DLANLKYVGGDMFEAI----PPADAV 259 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~----------~~~rv~~~~~d~~~~~----p~~D~~ 259 (306)
+++++||-||||.|..+.++++..|..+++++|+ |.|++.+++ ..+|++++.+|.++-+ ..||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 5789999999999999999998777778999999 899988876 3689999999998732 259999
Q ss_pred EehhhhccCCch--HHHHHHHHHHHhcCCCCCCcEEEEE
Q 021867 260 LLKWILHDWNDE--ECVKILKKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 260 ~~~~vlh~~~d~--~~~~iL~~~~~~L~p~~~gg~lli~ 296 (306)
++--.=..-+.+ -...+++.++++|+| ||.++..
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p---~Gv~v~q 197 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNP---GGIFVAQ 197 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEE---EEEEEEE
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCC---CCEEEEe
Confidence 875321100000 013679999999999 7877764
No 261
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.25 E-value=7.8e-07 Score=86.36 Aligned_cols=126 Identities=14% Similarity=0.147 Sum_probs=84.3
Q ss_pred cccccCCchHHHHHHHHHHhchhhhHHHHHhhchh--hhcCCCeEEEecCCccHHHHHHHHHC----CCCeEEEecchHH
Q 021867 158 WVYAGDEPKINNFFNEAMASDARLATRVVIHKCKD--VFEGLNSLVDVGGGIGTVAKAIAKAF----PNLECTDFDLPHV 231 (306)
Q Consensus 158 ~e~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~--~~~~~~~vlDvGgG~G~~~~~l~~~~----p~~~~~~~Dl~~~ 231 (306)
||.+++++-..+.|.+++... +.+.... ...+...|+|||||+|-++...+++. -++++..++-.++
T Consensus 324 YevFEkD~vKy~~Ye~AI~~A-------l~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~ 396 (637)
T 4gqb_A 324 YEVFEKDPIKYSQYQQAIYKC-------LLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN 396 (637)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH-------HHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH
T ss_pred hhhhcCChhhHHHHHHHHHHH-------HHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH
Confidence 666677777777777766432 2222111 02344689999999998843333322 2347889998667
Q ss_pred HHhchh------cCCCeEEEeccCCC-CCC-CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEE
Q 021867 232 VNGLES------DLANLKYVGGDMFE-AIP-PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKV 293 (306)
Q Consensus 232 ~~~a~~------~~~rv~~~~~d~~~-~~p-~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~l 293 (306)
...+++ ..++|+++.+|+.+ ..| .+|+++.=..=+..-.|-...+|-...+.|+| ||.+
T Consensus 397 A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKP---gGim 463 (637)
T 4gqb_A 397 AVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSPECLDGAQHFLKD---DGVS 463 (637)
T ss_dssp HHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEE---EEEE
T ss_pred HHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEEEcCcccccccCCHHHHHHHHHhcCC---CcEE
Confidence 777665 68999999999999 777 59999775544333334455667777889999 6765
No 262
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.24 E-value=1.4e-06 Score=75.66 Aligned_cols=82 Identities=12% Similarity=0.221 Sum_probs=60.6
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh---cCCCeEEEeccCCC-CCC----
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES---DLANLKYVGGDMFE-AIP---- 254 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~---~~~rv~~~~~d~~~-~~p---- 254 (306)
..+++... .....+|||||||+|.++..|+++. .+++++|+ +.+++.+++ ..++++++.+|+.+ +++
T Consensus 19 ~~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~ 94 (255)
T 3tqs_A 19 QKIVSAIH--PQKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSSVKT 94 (255)
T ss_dssp HHHHHHHC--CCTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGGGSCC
T ss_pred HHHHHhcC--CCCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHHHhcc
Confidence 34455444 4567899999999999999999875 68999999 888888876 34799999999998 543
Q ss_pred --CccEEEehhhhccCCch
Q 021867 255 --PADAVLLKWILHDWNDE 271 (306)
Q Consensus 255 --~~D~~~~~~vlh~~~d~ 271 (306)
.+| ++.+.-++.+.+
T Consensus 95 ~~~~~--vv~NlPY~is~~ 111 (255)
T 3tqs_A 95 DKPLR--VVGNLPYNISTP 111 (255)
T ss_dssp SSCEE--EEEECCHHHHHH
T ss_pred CCCeE--EEecCCcccCHH
Confidence 244 555554444443
No 263
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.21 E-value=7.9e-07 Score=78.28 Aligned_cols=84 Identities=14% Similarity=0.254 Sum_probs=61.0
Q ss_pred HHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCC--CeEEEecc-hHHHHhchhc-CCCeEEEeccCCC-CCCC-c--
Q 021867 185 VVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPN--LECTDFDL-PHVVNGLESD-LANLKYVGGDMFE-AIPP-A-- 256 (306)
Q Consensus 185 ~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~--~~~~~~Dl-~~~~~~a~~~-~~rv~~~~~d~~~-~~p~-~-- 256 (306)
.+++... .....+|||||||+|.++..|+++.+. .+++++|+ +.+++.+++. .++++++.+|+.+ +++. +
T Consensus 33 ~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~~~~~~ 110 (279)
T 3uzu_A 33 AIVAAIR--PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFGSIARP 110 (279)
T ss_dssp HHHHHHC--CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGGGGSCS
T ss_pred HHHHhcC--CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChhHhccc
Confidence 3444444 456789999999999999999998764 56999999 8888888753 5689999999988 5543 1
Q ss_pred ----cEEEehhhhccCCc
Q 021867 257 ----DAVLLKWILHDWND 270 (306)
Q Consensus 257 ----D~~~~~~vlh~~~d 270 (306)
.+.++.|.-++.+.
T Consensus 111 ~~~~~~~vv~NlPY~iss 128 (279)
T 3uzu_A 111 GDEPSLRIIGNLPYNISS 128 (279)
T ss_dssp SSSCCEEEEEECCHHHHH
T ss_pred ccCCceEEEEccCccccH
Confidence 24455555444443
No 264
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.18 E-value=4.8e-06 Score=82.42 Aligned_cols=98 Identities=9% Similarity=0.113 Sum_probs=74.2
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------cC-CCeEEEeccCCCC---CC-CccEEEehh
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------DL-ANLKYVGGDMFEA---IP-PADAVLLKW 263 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~~-~rv~~~~~d~~~~---~p-~~D~~~~~~ 263 (306)
...+|||+|||+|.++..+++.. ..+++++|+ +.+++.|++ .. ++++++.+|+++. .. .||+|++.-
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred CCCcEEEeeechhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 46799999999999999998754 346999999 888888876 22 5899999999872 22 599999843
Q ss_pred hhc--------cCC-chHHHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 264 ILH--------DWN-DEECVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 264 vlh--------~~~-d~~~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
... -+. ......+++.+.+.|+| ||.|++..
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~Lkp---gG~L~~s~ 657 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRA---GGTIMFSN 657 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCC---CcEEEEEE
Confidence 321 111 13456789999999999 88887544
No 265
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.16 E-value=9.1e-06 Score=74.26 Aligned_cols=103 Identities=23% Similarity=0.296 Sum_probs=72.0
Q ss_pred CCCeEEEecCCccHHHHHH--------HHHC-------CCCeEEEecchHH-----H---Hhchh----------cCCC-
Q 021867 196 GLNSLVDVGGGIGTVAKAI--------AKAF-------PNLECTDFDLPHV-----V---NGLES----------DLAN- 241 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l--------~~~~-------p~~~~~~~Dl~~~-----~---~~a~~----------~~~r- 241 (306)
+..+|+|+|||+|..+..+ .+++ |..++..-|+|.- . ...++ ...+
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 3588999999999888776 3344 7889999998531 1 11110 0001
Q ss_pred --eEEEeccCCC-CCC--CccEEEehhhhccCCc-h-----------------------------------HHHHHHHHH
Q 021867 242 --LKYVGGDMFE-AIP--PADAVLLKWILHDWND-E-----------------------------------ECVKILKKC 280 (306)
Q Consensus 242 --v~~~~~d~~~-~~p--~~D~~~~~~vlh~~~d-~-----------------------------------~~~~iL~~~ 280 (306)
+.-+++.|+. .+| ++|+++.+.+||..++ + +-..+|+..
T Consensus 132 ~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp SEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3446678887 566 5999999999997762 1 334579999
Q ss_pred HHhcCCCCCCcEEEEEeeecC
Q 021867 281 KEAVTSDDKKGKVIIIDMIRE 301 (306)
Q Consensus 281 ~~~L~p~~~gg~lli~e~~~~ 301 (306)
++.|+| ||++++.=...+
T Consensus 212 a~eL~p---GG~mvl~~~gr~ 229 (374)
T 3b5i_A 212 AAEVKR---GGAMFLVCLGRT 229 (374)
T ss_dssp HHHEEE---EEEEEEEEEECC
T ss_pred HHHhCC---CCEEEEEEecCC
Confidence 999999 898887655443
No 266
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.10 E-value=2.3e-06 Score=74.13 Aligned_cols=90 Identities=9% Similarity=0.101 Sum_probs=62.6
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-c--CCCeEEEeccCCC-CCCC---
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-D--LANLKYVGGDMFE-AIPP--- 255 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-~--~~rv~~~~~d~~~-~~p~--- 255 (306)
..+++... .....+|||||||+|.++. +. +.++.+++++|+ +.+++.+++ . .++++++.+|+.+ +++.
T Consensus 11 ~~iv~~~~--~~~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~ 86 (252)
T 1qyr_A 11 DSIVSAIN--PQKGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAE 86 (252)
T ss_dssp HHHHHHHC--CCTTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHHH
T ss_pred HHHHHhcC--CCCcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHhhc
Confidence 44444444 4556789999999999999 64 555545999999 889998886 2 2589999999988 5432
Q ss_pred ---ccEEEehhhhccCCchHHHHHH
Q 021867 256 ---ADAVLLKWILHDWNDEECVKIL 277 (306)
Q Consensus 256 ---~D~~~~~~vlh~~~d~~~~~iL 277 (306)
.+.+++++.-++.+.+...+++
T Consensus 87 ~~~~~~~vvsNlPY~i~~~il~~ll 111 (252)
T 1qyr_A 87 KMGQPLRVFGNLPYNISTPLMFHLF 111 (252)
T ss_dssp HHTSCEEEEEECCTTTHHHHHHHHH
T ss_pred ccCCceEEEECCCCCccHHHHHHHH
Confidence 2456666666655554433443
No 267
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.10 E-value=2.7e-06 Score=77.87 Aligned_cols=88 Identities=13% Similarity=0.186 Sum_probs=65.1
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCCC---C--------------
Q 021867 197 LNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFEA---I-------------- 253 (306)
Q Consensus 197 ~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~~---~-------------- 253 (306)
..+|||+|||+|.++..+++.. .+++++|. +.+++.|++ ..++++|+.+|+.+- .
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~--~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~ 291 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNF--DRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDL 291 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGS--SEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCG
T ss_pred CCEEEEccCCCCHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccc
Confidence 4689999999999999998753 47999999 888888876 346899999998651 1
Q ss_pred --CCccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 254 --PPADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 254 --p~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
..||+|++. -|. ..+.+++.+.|++ +|+++.+.
T Consensus 292 ~~~~fD~Vv~d-----PPr---~g~~~~~~~~l~~---~g~ivyvs 326 (369)
T 3bt7_A 292 KSYQCETIFVD-----PPR---SGLDSETEKMVQA---YPRILYIS 326 (369)
T ss_dssp GGCCEEEEEEC-----CCT---TCCCHHHHHHHTT---SSEEEEEE
T ss_pred ccCCCCEEEEC-----cCc---cccHHHHHHHHhC---CCEEEEEE
Confidence 158998863 221 1234556666677 78888775
No 268
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.08 E-value=1.3e-05 Score=79.32 Aligned_cols=110 Identities=12% Similarity=0.083 Sum_probs=75.9
Q ss_pred HHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHH------------------------------------------CCC
Q 021867 183 TRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKA------------------------------------------FPN 220 (306)
Q Consensus 183 ~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~------------------------------------------~p~ 220 (306)
+..++.... +.+..+|+|.+||+|.++++.+.. .+.
T Consensus 179 Aa~ll~~~~--~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~ 256 (703)
T 3v97_A 179 AAAIVMRSG--WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYS 256 (703)
T ss_dssp HHHHHHHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhhC--CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCC
Confidence 334444444 456678999999999999988765 234
Q ss_pred CeEEEecc-hHHHHhchh------cCCCeEEEeccCCC-CCC----CccEEEehhhhcc-CC-chHHHHHHHHHHHhc--
Q 021867 221 LECTDFDL-PHVVNGLES------DLANLKYVGGDMFE-AIP----PADAVLLKWILHD-WN-DEECVKILKKCKEAV-- 284 (306)
Q Consensus 221 ~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~-~~p----~~D~~~~~~vlh~-~~-d~~~~~iL~~~~~~L-- 284 (306)
.+++++|+ +.+++.|+. ..++|+|..+|+.+ ..| .+|+|+++=.... +. +++...+.+.+.+.|
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~ 336 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKN 336 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHH
T ss_pred ccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHh
Confidence 68999999 899988886 45679999999987 222 5899888643321 22 334445555555444
Q ss_pred -CCCCCCcEEEEEe
Q 021867 285 -TSDDKKGKVIIID 297 (306)
Q Consensus 285 -~p~~~gg~lli~e 297 (306)
.| ||++.|+.
T Consensus 337 ~~~---g~~~~ilt 347 (703)
T 3v97_A 337 QFG---GWNLSLFS 347 (703)
T ss_dssp HCT---TCEEEEEE
T ss_pred hCC---CCeEEEEe
Confidence 46 89888874
No 269
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.06 E-value=9.3e-06 Score=70.57 Aligned_cols=71 Identities=20% Similarity=0.235 Sum_probs=54.8
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-h-------HHHHhchh------cCCCeEEEeccCCC--C-C---
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-P-------HVVNGLES------DLANLKYVGGDMFE--A-I--- 253 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~-------~~~~~a~~------~~~rv~~~~~d~~~--~-~--- 253 (306)
.....+|||+|||+|.++..+++. ..+++++|+ + .+++.|++ ..+||+++.+|+.+ + +
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~ 158 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKT 158 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhcc
Confidence 345578999999999999999986 468999999 6 67777764 24679999999876 2 2
Q ss_pred -CCccEEEehhhhc
Q 021867 254 -PPADAVLLKWILH 266 (306)
Q Consensus 254 -p~~D~~~~~~vlh 266 (306)
..||+|++.-.++
T Consensus 159 ~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 159 QGKPDIVYLDPMYP 172 (258)
T ss_dssp HCCCSEEEECCCC-
T ss_pred CCCccEEEECCCCC
Confidence 3599999854443
No 270
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.04 E-value=1.3e-05 Score=73.39 Aligned_cols=103 Identities=17% Similarity=0.224 Sum_probs=70.6
Q ss_pred CCeEEEecCCccHHHHHHHHH-----------------CCCCeEEEecch-----------H-HHHhchh-c--CCCeEE
Q 021867 197 LNSLVDVGGGIGTVAKAIAKA-----------------FPNLECTDFDLP-----------H-VVNGLES-D--LANLKY 244 (306)
Q Consensus 197 ~~~vlDvGgG~G~~~~~l~~~-----------------~p~~~~~~~Dl~-----------~-~~~~a~~-~--~~rv~~ 244 (306)
.-+|+|+||++|..+..+... .|.++++.-|+| + ..+..++ . ..+-.|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 678999999999988877766 577889999997 1 1111111 1 122334
Q ss_pred ---EeccCCC-CCC--CccEEEehhhhccCCchH-------------------------H------------HHHHHHHH
Q 021867 245 ---VGGDMFE-AIP--PADAVLLKWILHDWNDEE-------------------------C------------VKILKKCK 281 (306)
Q Consensus 245 ---~~~d~~~-~~p--~~D~~~~~~vlh~~~d~~-------------------------~------------~~iL~~~~ 281 (306)
+++.|+. .+| ++|+++.+.+||..++.. + ..+|+..+
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777 566 599999999999765321 1 22488889
Q ss_pred HhcCCCCCCcEEEEEeeecCC
Q 021867 282 EAVTSDDKKGKVIIIDMIREN 302 (306)
Q Consensus 282 ~~L~p~~~gg~lli~e~~~~~ 302 (306)
+.|+| ||++++.=...++
T Consensus 213 ~eL~p---GG~mvl~~~gr~~ 230 (384)
T 2efj_A 213 EELIS---RGRMLLTFICKED 230 (384)
T ss_dssp HHEEE---EEEEEEEEECCCT
T ss_pred HHhcc---CCeEEEEEecCCC
Confidence 99999 8888887554433
No 271
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.98 E-value=7.3e-06 Score=79.78 Aligned_cols=126 Identities=13% Similarity=0.068 Sum_probs=78.9
Q ss_pred cccccCCchHHHHHHHHHHhchhhhHHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHH----C---------CCCeEE
Q 021867 158 WVYAGDEPKINNFFNEAMASDARLATRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKA----F---------PNLECT 224 (306)
Q Consensus 158 ~e~~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~----~---------p~~~~~ 224 (306)
||.+.+++-+...|.+++... +...+.. -.+...|+|||||+|-++...+++ . ...+++
T Consensus 379 Ye~fekD~vRy~~Y~~AI~~a-------l~d~~~~-~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVy 450 (745)
T 3ua3_A 379 YNTFEQDQIKYDVYGEAVVGA-------LKDLGAD-GRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLY 450 (745)
T ss_dssp HHHHHHCHHHHHHHHHHHHHH-------HHHHHTT-CCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEE
T ss_pred HHHHcCChhhHHHHHHHHHHH-------HHHhhcc-cCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEE
Confidence 555556666666666655432 1111110 123578999999999997433222 1 234899
Q ss_pred EecchH-HHHhchh-----cCCCeEEEeccCCC-CC------C-CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCC
Q 021867 225 DFDLPH-VVNGLES-----DLANLKYVGGDMFE-AI------P-PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKK 290 (306)
Q Consensus 225 ~~Dl~~-~~~~a~~-----~~~rv~~~~~d~~~-~~------p-~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~g 290 (306)
++|-.. .+...+. ..++|+++.+|+.+ .. | .+|+++.=..=.....|-....|..+.+.|+| |
T Consensus 451 AVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp---~ 527 (745)
T 3ua3_A 451 IVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKP---T 527 (745)
T ss_dssp EEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCT---T
T ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCC---C
Confidence 999843 3322222 67889999999998 44 4 59999876664433444445678888899999 7
Q ss_pred cEEE
Q 021867 291 GKVI 294 (306)
Q Consensus 291 g~ll 294 (306)
|.++
T Consensus 528 Gi~i 531 (745)
T 3ua3_A 528 TISI 531 (745)
T ss_dssp CEEE
T ss_pred cEEE
Confidence 7543
No 272
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.91 E-value=3.5e-05 Score=68.73 Aligned_cols=68 Identities=13% Similarity=0.175 Sum_probs=54.9
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHC-CCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCC-CC-----CCccEEE
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAF-PNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFE-AI-----PPADAVL 260 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~-~~-----p~~D~~~ 260 (306)
.....+|||+|||+|..+..+++.. +..+++++|+ +..++.+++ ..++|+++.+|+.+ +. ..||.|+
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl 179 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYIL 179 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEE
Confidence 3556799999999999999999875 5679999999 777777765 34689999999876 21 2589998
Q ss_pred e
Q 021867 261 L 261 (306)
Q Consensus 261 ~ 261 (306)
+
T Consensus 180 ~ 180 (309)
T 2b9e_A 180 L 180 (309)
T ss_dssp E
T ss_pred E
Confidence 7
No 273
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.91 E-value=1.6e-05 Score=76.45 Aligned_cols=100 Identities=11% Similarity=0.106 Sum_probs=73.0
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCC------------------CCeEEEecc-hHHHHhchh-----cCC-----CeEEE
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFP------------------NLECTDFDL-PHVVNGLES-----DLA-----NLKYV 245 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p------------------~~~~~~~Dl-~~~~~~a~~-----~~~-----rv~~~ 245 (306)
....+|+|.+||+|.++..+.+... ..+++++|+ +.++..|+. ..+ ++.+.
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~ 247 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIR 247 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEE
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeE
Confidence 3456899999999999988876532 247999999 778887775 223 27899
Q ss_pred eccCCC-C---CCCccEEEehhhhccCC------------chHHHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 246 GGDMFE-A---IPPADAVLLKWILHDWN------------DEECVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 246 ~~d~~~-~---~p~~D~~~~~~vlh~~~------------d~~~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
.+|.+. + ...||+|+..=.+.... ...-..+++++.+.|+| ||++.++-
T Consensus 248 ~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~---gGr~a~V~ 312 (541)
T 2ar0_A 248 LGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHP---GGRAAVVV 312 (541)
T ss_dssp ESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred eCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCC---CCEEEEEe
Confidence 999987 3 23699999865543211 11124689999999999 89988874
No 274
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.91 E-value=0.00014 Score=65.57 Aligned_cols=103 Identities=18% Similarity=0.219 Sum_probs=87.7
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchh----c----------------------CCCeEEEecc
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLES----D----------------------LANLKYVGGD 248 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~----~----------------------~~rv~~~~~d 248 (306)
.+...||.+|||.......+...+|+++++-+|.|++++.-++ . .++.++++.|
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 3568899999999999999999889999999999999886444 1 3789999999
Q ss_pred CCC-CC----------C-CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecC
Q 021867 249 MFE-AI----------P-PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRE 301 (306)
Q Consensus 249 ~~~-~~----------p-~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~ 301 (306)
+.+ .+ + ...++++--+|++++.+++..+|+.+.+.++ +|.+++.|.+.+
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~~----~~~~v~~e~i~~ 236 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKFS----HGLWISYDPIGG 236 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCS----SEEEEEEEECCC
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhCC----CcEEEEEeccCC
Confidence 987 22 1 2578899999999999999999999999884 689999999877
No 275
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.90 E-value=2.7e-05 Score=70.65 Aligned_cols=105 Identities=18% Similarity=0.197 Sum_probs=71.0
Q ss_pred cCCCeEEEecCCccHHHHHHHHH----------------CCCCeEEEecchH-HHH-hchhcC-----CC---eEEEecc
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKA----------------FPNLECTDFDLPH-VVN-GLESDL-----AN---LKYVGGD 248 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~----------------~p~~~~~~~Dl~~-~~~-~a~~~~-----~r---v~~~~~d 248 (306)
++.-+|+|+||++|..+..+... .|..+++.-|+|. ... ..+.+. .+ +.-+++.
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGS 129 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESC
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchh
Confidence 45678999999999665443332 5677889999942 111 112111 12 2345678
Q ss_pred CCC-CCC--CccEEEehhhhccCCc-------------------------------hHHHHHHHHHHHhcCCCCCCcEEE
Q 021867 249 MFE-AIP--PADAVLLKWILHDWND-------------------------------EECVKILKKCKEAVTSDDKKGKVI 294 (306)
Q Consensus 249 ~~~-~~p--~~D~~~~~~vlh~~~d-------------------------------~~~~~iL~~~~~~L~p~~~gg~ll 294 (306)
|+. .+| ++|+++.+.+||..++ .+-..+|+..++.|+| ||+++
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~p---GG~mv 206 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVP---GGRMV 206 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCT---TCEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CceEE
Confidence 887 567 5999999999997654 1234569999999999 89998
Q ss_pred EEeeecCC
Q 021867 295 IIDMIREN 302 (306)
Q Consensus 295 i~e~~~~~ 302 (306)
+.=...++
T Consensus 207 l~~~gr~~ 214 (359)
T 1m6e_X 207 LTILGRRS 214 (359)
T ss_dssp EEEEECSS
T ss_pred EEEecCCC
Confidence 87655543
No 276
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.88 E-value=2.8e-05 Score=67.42 Aligned_cols=99 Identities=12% Similarity=0.032 Sum_probs=62.0
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHh-chh---cCCCeEEEeccCCC-CCC--CccEEEehhhhc
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNG-LES---DLANLKYVGGDMFE-AIP--PADAVLLKWILH 266 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~-a~~---~~~rv~~~~~d~~~-~~p--~~D~~~~~~vlh 266 (306)
+....+|||+|||.|.++..++++.+-.++.++|+..-+.. ... ...++.....++.. .++ .+|+|++....+
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~apn 151 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIGES 151 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCccC
Confidence 56677999999999999999988766556666666311110 110 01133334444321 232 599999987655
Q ss_pred ---cCCch-HHHHHHHHHHHhcCCCCCC-cEEEE
Q 021867 267 ---DWNDE-ECVKILKKCKEAVTSDDKK-GKVII 295 (306)
Q Consensus 267 ---~~~d~-~~~~iL~~~~~~L~p~~~g-g~lli 295 (306)
.|.|. ....+|+.+.+.|+| | |.+++
T Consensus 152 sG~~~~D~~rs~~LL~~a~~~Lkp---G~G~FV~ 182 (277)
T 3evf_A 152 SSSSVTEGERTVRVLDTVEKWLAC---GVDNFCV 182 (277)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHTT---CCSEEEE
T ss_pred cCchHHHHHHHHHHHHHHHHHhCC---CCCeEEE
Confidence 22232 223568999999999 8 88776
No 277
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.79 E-value=5.1e-05 Score=69.58 Aligned_cols=92 Identities=11% Similarity=0.012 Sum_probs=71.3
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh----c---------------C-CCeEEEeccCCCC--
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES----D---------------L-ANLKYVGGDMFEA-- 252 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~----~---------------~-~rv~~~~~d~~~~-- 252 (306)
...+|||+|||+|.++..++++.+..+++++|+ +..++.+++ . . ++++++.+|..+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 467899999999999999999988889999999 888887776 2 1 2389999998762
Q ss_pred -CC-CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEE
Q 021867 253 -IP-PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIII 296 (306)
Q Consensus 253 -~p-~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~ 296 (306)
.+ .||+|++. .. .+ ...+|..+.+.+++ ||.|++.
T Consensus 127 ~~~~~fD~I~lD-P~--~~---~~~~l~~a~~~lk~---gG~l~vt 163 (378)
T 2dul_A 127 ERHRYFHFIDLD-PF--GS---PMEFLDTALRSAKR---RGILGVT 163 (378)
T ss_dssp HSTTCEEEEEEC-CS--SC---CHHHHHHHHHHEEE---EEEEEEE
T ss_pred hccCCCCEEEeC-CC--CC---HHHHHHHHHHhcCC---CCEEEEE
Confidence 23 59999853 21 11 14689999999999 7876664
No 278
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.73 E-value=0.0001 Score=57.65 Aligned_cols=83 Identities=22% Similarity=0.179 Sum_probs=58.6
Q ss_pred cCCCeEEEecCCcc-HHHHHHHHHCCCCeEEEecc-hHHHHhchhcCCCeEEEeccCCCCCC----CccEEEehhhhccC
Q 021867 195 EGLNSLVDVGGGIG-TVAKAIAKAFPNLECTDFDL-PHVVNGLESDLANLKYVGGDMFEAIP----PADAVLLKWILHDW 268 (306)
Q Consensus 195 ~~~~~vlDvGgG~G-~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~~~p----~~D~~~~~~vlh~~ 268 (306)
....+|||||||.| ..+..|++. .+..+++.|+ |..+ .++..|+|+|.. +||+|+..+.
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~-~g~~V~atDInp~Av----------~~v~dDiF~P~~~~Y~~~DLIYsirP---- 98 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKH-SKVDLVLTDIKPSHG----------GIVRDDITSPRMEIYRGAALIYSIRP---- 98 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHH-SCCEEEEECSSCSST----------TEECCCSSSCCHHHHTTEEEEEEESC----
T ss_pred CCCCcEEEEccCCChHHHHHHHHh-CCCeEEEEECCcccc----------ceEEccCCCCcccccCCcCEEEEcCC----
Confidence 44679999999999 588888764 3678999997 4332 288999999755 6899987763
Q ss_pred CchHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 269 NDEECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 269 ~d~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
.++...-+.++++.. |.-++|.-.
T Consensus 99 -P~El~~~i~~lA~~v-----~adliI~pL 122 (153)
T 2k4m_A 99 -PAEIHSSLMRVADAV-----GARLIIKPL 122 (153)
T ss_dssp -CTTTHHHHHHHHHHH-----TCEEEEECB
T ss_pred -CHHHHHHHHHHHHHc-----CCCEEEEcC
Confidence 344455566666665 356666543
No 279
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.71 E-value=3.1e-05 Score=71.23 Aligned_cols=94 Identities=11% Similarity=-0.013 Sum_probs=71.8
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCC-CeEEEecc-hHHHHhchh------cCCC-eEEEeccCCC--C--CC-CccEEE
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPN-LECTDFDL-PHVVNGLES------DLAN-LKYVGGDMFE--A--IP-PADAVL 260 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~-~~~~~~Dl-~~~~~~a~~------~~~r-v~~~~~d~~~--~--~p-~~D~~~ 260 (306)
.+..+|||++||+|.++..++++.++ .+++++|+ +..++.+++ ..++ ++++.+|.++ . .+ .||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 34679999999999999999998766 47999999 888888776 3455 9999999865 2 23 599998
Q ss_pred ehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 261 LKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 261 ~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
+.= + ... ..++..+.+.|++ ||.|++.-
T Consensus 131 lDP--~--g~~--~~~l~~a~~~Lk~---gGll~~t~ 158 (392)
T 3axs_A 131 LDP--F--GTP--VPFIESVALSMKR---GGILSLTA 158 (392)
T ss_dssp ECC--S--SCC--HHHHHHHHHHEEE---EEEEEEEE
T ss_pred ECC--C--cCH--HHHHHHHHHHhCC---CCEEEEEe
Confidence 753 1 111 3589999999999 78666543
No 280
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.67 E-value=3e-05 Score=67.36 Aligned_cols=107 Identities=16% Similarity=0.124 Sum_probs=68.4
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchH-HHHhchh---cC-CCeEEEec-cCCC-CCCCc
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPH-VVNGLES---DL-ANLKYVGG-DMFE-AIPPA 256 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~-~~~~a~~---~~-~rv~~~~~-d~~~-~~p~~ 256 (306)
.++.+.+. +....+|||+|||.|.++...+++.+-..++++|+.. ....+.. .. +-+.+... |++. +...+
T Consensus 80 ~ei~eK~~--Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~ 157 (282)
T 3gcz_A 80 RWMEERGY--VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPG 157 (282)
T ss_dssp HHHHHTTS--CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCC
T ss_pred HHHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCc
Confidence 44555553 6667799999999999999999877766788888721 1111111 12 22444443 5544 22259
Q ss_pred cEEEehhhhcc---CCc-hHHHHHHHHHHHhcCCCCCC--cEEEE
Q 021867 257 DAVLLKWILHD---WND-EECVKILKKCKEAVTSDDKK--GKVII 295 (306)
Q Consensus 257 D~~~~~~vlh~---~~d-~~~~~iL~~~~~~L~p~~~g--g~lli 295 (306)
|+|++....+- +-| .....+|+-+.+.|+| | |.+++
T Consensus 158 DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~---g~~G~Fv~ 199 (282)
T 3gcz_A 158 DTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQE---GNYTEFCI 199 (282)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHH---HCCCEEEE
T ss_pred CEEEecCccCCCChHHHHHHHHHHHHHHHHHcCC---CCCCcEEE
Confidence 99999877650 112 2223568888899999 7 87776
No 281
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.66 E-value=7.5e-05 Score=67.93 Aligned_cols=97 Identities=18% Similarity=0.125 Sum_probs=71.8
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-------------cCCCeEEEeccCCCC-------C
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-------------DLANLKYVGGDMFEA-------I 253 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-------------~~~rv~~~~~d~~~~-------~ 253 (306)
..+++||-||+|.|..+.++++ +|.-+++++|+ |.|++.+++ ..+|++++.+|.++- .
T Consensus 204 ~~pkrVLIIGgGdG~~~revlk-h~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVK-LKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHT-TCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCCeEEEECCCcHHHHHHHHh-cCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 3468999999999999999997 45578999999 889998886 135799999998751 1
Q ss_pred CCccEEEehhhhcc-CCc-------hHHHHHHHHHHHhcCCCCCCcEEEE
Q 021867 254 PPADAVLLKWILHD-WND-------EECVKILKKCKEAVTSDDKKGKVII 295 (306)
Q Consensus 254 p~~D~~~~~~vlh~-~~d-------~~~~~iL~~~~~~L~p~~~gg~lli 295 (306)
..||+|++--.-.. -++ .-...+++.++++|+| ||.++.
T Consensus 283 ~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p---~GVlv~ 329 (381)
T 3c6k_A 283 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQ---DGKYFT 329 (381)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEE---EEEEEE
T ss_pred CceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCC---CCEEEE
Confidence 25999987532111 011 1124678999999999 787765
No 282
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.56 E-value=7.3e-05 Score=71.74 Aligned_cols=98 Identities=16% Similarity=0.123 Sum_probs=70.0
Q ss_pred CCeEEEecCCccHHHHHHHHHCC---------------CCeEEEecc-hHHHHhchh------cCCCeEEEeccCCC-C-
Q 021867 197 LNSLVDVGGGIGTVAKAIAKAFP---------------NLECTDFDL-PHVVNGLES------DLANLKYVGGDMFE-A- 252 (306)
Q Consensus 197 ~~~vlDvGgG~G~~~~~l~~~~p---------------~~~~~~~Dl-~~~~~~a~~------~~~rv~~~~~d~~~-~- 252 (306)
..+|+|.+||+|.++..+.+..+ ..++.++|+ +.++..|+. ...+|.+..+|.+. +
T Consensus 245 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~ 324 (544)
T 3khk_A 245 KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQ 324 (544)
T ss_dssp SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCS
T ss_pred CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcc
Confidence 34999999999999988765432 468999999 777777775 23445558899887 3
Q ss_pred CC--CccEEEehhhhc--cCCch-------------------------HHHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 253 IP--PADAVLLKWILH--DWNDE-------------------------ECVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 253 ~p--~~D~~~~~~vlh--~~~d~-------------------------~~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
.+ .||+|+.+=... .|..+ .-..+++.+.+.|+| ||++.++-
T Consensus 325 ~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~---gGr~aiVl 395 (544)
T 3khk_A 325 HPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAP---TGSMALLL 395 (544)
T ss_dssp CTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEE---EEEEEEEE
T ss_pred cccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhcc---CceEEEEe
Confidence 22 599999854433 23221 012589999999999 89987763
No 283
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.48 E-value=0.00072 Score=61.23 Aligned_cols=96 Identities=13% Similarity=0.141 Sum_probs=66.0
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhchhcCCCeEEEeccCCCCCC---CccEEEehhhhccCCc
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGLESDLANLKYVGGDMFEAIP---PADAVLLKWILHDWND 270 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a~~~~~rv~~~~~d~~~~~p---~~D~~~~~~vlh~~~d 270 (306)
+....++||+||+.|+++..++++ +.+++++|..++-.... ..++|++..+|.+...| .+|++++-.+.+ .
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~~~l~-~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~~---p 282 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMAQSLM-DTGQVTWLREDGFKFRPTRSNISWMVCDMVEK---P 282 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCCHHHH-TTTCEEEECSCTTTCCCCSSCEEEEEECCSSC---H
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcChhhc-cCCCeEEEeCccccccCCCCCcCEEEEcCCCC---h
Confidence 456789999999999999999987 57999999844333322 46899999999998322 589999877653 3
Q ss_pred hHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 271 EECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 271 ~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
.....++.+....... ++.++.+..
T Consensus 283 ~~~~~l~~~wl~~~~~---~~aI~~lKL 307 (375)
T 4auk_A 283 AKVAALMAQWLVNGWC---RETIFNLKL 307 (375)
T ss_dssp HHHHHHHHHHHHTTSC---SEEEEEEEC
T ss_pred HHhHHHHHHHHhcccc---ceEEEEEEe
Confidence 3334444444433333 344444443
No 284
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.45 E-value=0.0005 Score=68.07 Aligned_cols=99 Identities=14% Similarity=0.101 Sum_probs=69.3
Q ss_pred CCCeEEEecCCccHHHHHHHHHCC---CCeEEEecc-hHHHHhc--hh---------cCCCeEEEeccCCCC----CCCc
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFP---NLECTDFDL-PHVVNGL--ES---------DLANLKYVGGDMFEA----IPPA 256 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p---~~~~~~~Dl-~~~~~~a--~~---------~~~rv~~~~~d~~~~----~p~~ 256 (306)
...+|+|.|||+|.++..+++..+ ..+++++|+ +.+++.| +. ..+...+...|++.+ ...|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 467999999999999999999886 357999999 7777777 22 112245667777763 2259
Q ss_pred cEEEehhhhcc-CCch--------------------------HHHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 257 DAVLLKWILHD-WNDE--------------------------ECVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 257 D~~~~~~vlh~-~~d~--------------------------~~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
|+|+..=..-. +..+ -...+++.+.+.|+| ||++.++=
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKp---GGrLAfIl 465 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQD---GTVISAIM 465 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCT---TCEEEEEE
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCC---CcEEEEEE
Confidence 99988544411 1111 123478889999999 89888764
No 285
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.45 E-value=0.0002 Score=62.04 Aligned_cols=68 Identities=19% Similarity=0.264 Sum_probs=50.9
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHH-------HHhchh-----c-C-CCeEEEeccCCC--C-CC-CccE
Q 021867 198 NSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHV-------VNGLES-----D-L-ANLKYVGGDMFE--A-IP-PADA 258 (306)
Q Consensus 198 ~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~-------~~~a~~-----~-~-~rv~~~~~d~~~--~-~p-~~D~ 258 (306)
.+|||+|||.|..+..++.+ ..+++++|. +.+ ++.++. . . +||+++.+|..+ + .+ .||+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDv 167 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQV 167 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSE
T ss_pred CEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCE
Confidence 79999999999999999998 457999999 544 333322 1 2 689999999875 2 33 5999
Q ss_pred EEehhhhcc
Q 021867 259 VLLKWILHD 267 (306)
Q Consensus 259 ~~~~~vlh~ 267 (306)
|++.-..+.
T Consensus 168 V~lDP~y~~ 176 (258)
T 2oyr_A 168 VYLDPMFPH 176 (258)
T ss_dssp EEECCCCCC
T ss_pred EEEcCCCCC
Confidence 998755543
No 286
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.44 E-value=8.9e-05 Score=68.45 Aligned_cols=65 Identities=15% Similarity=0.148 Sum_probs=53.5
Q ss_pred CCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh----c---CCCeEEEeccCCCC--C---CCccEEEeh
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES----D---LANLKYVGGDMFEA--I---PPADAVLLK 262 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~----~---~~rv~~~~~d~~~~--~---p~~D~~~~~ 262 (306)
...+|||+|||+|..+..+++.. .+++++|+ +.+++.|++ . .++|+++.+|+++. . ..||+|++.
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g--~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKA--SQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHhcC--CEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 36899999999999999998874 68999999 888888876 2 25899999999873 2 269999983
No 287
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=97.35 E-value=9.1e-05 Score=50.28 Aligned_cols=55 Identities=13% Similarity=0.273 Sum_probs=45.1
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecC
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLK 104 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t 104 (306)
+..|+++|..++.|+|..|||+.+|+ +...+.+++..|...|++.... .+.|.++
T Consensus 12 ~~~IL~~L~~~~~~~s~~eLA~~lgl---sr~tv~~~l~~L~~~G~I~~~~----------~G~y~lg 66 (67)
T 2heo_A 12 EQKILQVLSDDGGPVAIFQLVKKCQV---PKKTLNQVLYRLKKEDRVSSPS----------PKYWSIG 66 (67)
T ss_dssp HHHHHHHHHHHCSCEEHHHHHHHHCS---CHHHHHHHHHHHHHTTSEEEEE----------TTEEEEC
T ss_pred HHHHHHHHHHcCCCcCHHHHHHHHCc---CHHHHHHHHHHHHHCCcEecCC----------CceEeeC
Confidence 44577777654468999999999999 6899999999999999988754 4777653
No 288
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.34 E-value=0.0017 Score=54.02 Aligned_cols=92 Identities=15% Similarity=0.131 Sum_probs=63.2
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh------c--CCCeEEEeccCCCC------------
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES------D--LANLKYVGGDMFEA------------ 252 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~------~--~~rv~~~~~d~~~~------------ 252 (306)
..+.++||+|||| ..+..+++ .++.+++.+|. ++..+.|++ . .++|+++.+|..+-
T Consensus 28 l~~a~~VLEiGtG--ySTl~lA~-~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~ 104 (202)
T 3cvo_A 28 YEEAEVILEYGSG--GSTVVAAE-LPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKW 104 (202)
T ss_dssp HHHCSEEEEESCS--HHHHHHHT-STTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTG
T ss_pred hhCCCEEEEECch--HHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhh
Confidence 4567899999985 55566665 45789999998 777777765 3 67899999995431
Q ss_pred ------------C---CCccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 253 ------------I---PPADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 253 ------------~---p~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
. ..||+|++--- . ....+..+.+.|+| ||.| |+|.+
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfIDg~-----k--~~~~~~~~l~~l~~---GG~I-v~DNv 155 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLVDGR-----F--RVGCALATAFSITR---PVTL-LFDDY 155 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEECSS-----S--HHHHHHHHHHHCSS---CEEE-EETTG
T ss_pred hhHHHHhhhhhccccCCCCCEEEEeCC-----C--chhHHHHHHHhcCC---CeEE-EEeCC
Confidence 1 24899988642 1 12345556688998 6655 66654
No 289
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.34 E-value=0.00059 Score=65.39 Aligned_cols=98 Identities=16% Similarity=0.163 Sum_probs=72.4
Q ss_pred CCCeEEEecCCccHHHHHHHHHC---CCCeEEEecc-hHHHHhchh-----cC--CCeEEEeccCCCC-CC-----CccE
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAF---PNLECTDFDL-PHVVNGLES-----DL--ANLKYVGGDMFEA-IP-----PADA 258 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~---p~~~~~~~Dl-~~~~~~a~~-----~~--~rv~~~~~d~~~~-~p-----~~D~ 258 (306)
...+|+|.+||+|.++..+.+.. +..++.++|+ +.+...|+. .. +++.+..+|.+.. +| .||+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~ 300 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG 300 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSE
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccE
Confidence 45799999999999999998885 3568999999 777777765 22 5789999999873 22 4999
Q ss_pred EEehhhhc-cCC---------------------chHHHHHHHHHHHhcC-CCCCCcEEEEEe
Q 021867 259 VLLKWILH-DWN---------------------DEECVKILKKCKEAVT-SDDKKGKVIIID 297 (306)
Q Consensus 259 ~~~~~vlh-~~~---------------------d~~~~~iL~~~~~~L~-p~~~gg~lli~e 297 (306)
|+.+=... .|. +.+ ..+++.+.+.|+ | ||++.++-
T Consensus 301 IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~-~~Fl~~~l~~Lk~~---gGr~a~Vl 358 (542)
T 3lkd_A 301 VLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKAD-FAFLLHGYYHLKQD---NGVMAIVL 358 (542)
T ss_dssp EEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCH-HHHHHHHHHTBCTT---TCEEEEEE
T ss_pred EEecCCcCCccccchhhhhhhhhhhhhhcCCCchhh-HHHHHHHHHHhCCC---ceeEEEEe
Confidence 99752221 121 111 248999999999 8 89887663
No 290
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.28 E-value=0.00017 Score=62.48 Aligned_cols=97 Identities=20% Similarity=0.184 Sum_probs=63.7
Q ss_pred CCCeEEEecCCccHHHHHHHHH-------CCC-----CeEEEecc-h---HHHH-----------hchh-----------
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKA-------FPN-----LECTDFDL-P---HVVN-----------GLES----------- 237 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~-------~p~-----~~~~~~Dl-~---~~~~-----------~a~~----------- 237 (306)
+..+|||||+|+|..+..+++. .|+ ++++.++. | +.+. .|++
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4579999999999988887664 674 58899987 3 2322 2222
Q ss_pred --------cCCCeEEEeccCCC--C-CC-----CccEEEehh-hhccCCchHHHHHHHHHHHhcCCCCCCcEEEE
Q 021867 238 --------DLANLKYVGGDMFE--A-IP-----PADAVLLKW-ILHDWNDEECVKILKKCKEAVTSDDKKGKVII 295 (306)
Q Consensus 238 --------~~~rv~~~~~d~~~--~-~p-----~~D~~~~~~-vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli 295 (306)
...++++..+|..+ + .+ .||++++-- .-...++-.-..+|+.+++.|+| ||+|+.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~p---GG~l~t 211 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARP---GGTLAT 211 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEE---EEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCC---CcEEEE
Confidence 01357789999866 2 22 489999842 11101110123689999999999 888775
No 291
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.28 E-value=0.00031 Score=61.41 Aligned_cols=99 Identities=13% Similarity=0.161 Sum_probs=64.7
Q ss_pred hhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHH-HHhch---h-cCCCeEEEec-cCCC-CCCCccEEEehhhh
Q 021867 193 VFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHV-VNGLE---S-DLANLKYVGG-DMFE-AIPPADAVLLKWIL 265 (306)
Q Consensus 193 ~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~-~~~a~---~-~~~rv~~~~~-d~~~-~~p~~D~~~~~~vl 265 (306)
.+....+|||+||+.|.++..++++.+-..++++|+... ..... . ..+-+.+..+ |++. +-..+|++++...-
T Consensus 78 l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~AP 157 (300)
T 3eld_A 78 YLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIGE 157 (300)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCC
T ss_pred CCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCEEeecCcC
Confidence 356778999999999999999998776667888887321 11110 0 1123445544 6555 22258999986655
Q ss_pred ccCC----c-hHHHHHHHHHHHhcCCCCCC-cEEEE
Q 021867 266 HDWN----D-EECVKILKKCKEAVTSDDKK-GKVII 295 (306)
Q Consensus 266 h~~~----d-~~~~~iL~~~~~~L~p~~~g-g~lli 295 (306)
+ -. | .....+|.-+.+.|+| | |.+++
T Consensus 158 n-sG~~~~D~~rs~~LL~~A~~~Lkp---G~G~FV~ 189 (300)
T 3eld_A 158 S-SSNPLVERDRTMKVLENFERWKHV---NTENFCV 189 (300)
T ss_dssp C-CSSHHHHHHHHHHHHHHHHHHCCT---TCCEEEE
T ss_pred C-CCCHHHHHHHHHHHHHHHHHHhcC---CCCcEEE
Confidence 4 11 1 1224568888999999 8 88776
No 292
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.27 E-value=0.00047 Score=60.07 Aligned_cols=76 Identities=18% Similarity=0.172 Sum_probs=60.3
Q ss_pred hHHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchhc-CCCeEEEeccCCC-C------
Q 021867 182 ATRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLESD-LANLKYVGGDMFE-A------ 252 (306)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~-~~rv~~~~~d~~~-~------ 252 (306)
+.+.+++.+. ......+||.+||.|.++..|+++ +.+++++|. |.+++.|++. .+|++++.+||.+ +
T Consensus 10 Ll~e~le~L~--~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~~L~~~ 85 (285)
T 1wg8_A 10 LYQEALDLLA--VRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAAL 85 (285)
T ss_dssp THHHHHHHHT--CCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHT
T ss_pred HHHHHHHhhC--CCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHHHHHHc
Confidence 3456666665 556789999999999999999998 679999999 8888888761 2689999999976 2
Q ss_pred -CCCccEEEe
Q 021867 253 -IPPADAVLL 261 (306)
Q Consensus 253 -~p~~D~~~~ 261 (306)
...+|.|++
T Consensus 86 g~~~vDgIL~ 95 (285)
T 1wg8_A 86 GVERVDGILA 95 (285)
T ss_dssp TCSCEEEEEE
T ss_pred CCCCcCEEEe
Confidence 124788875
No 293
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.25 E-value=0.0026 Score=56.47 Aligned_cols=102 Identities=17% Similarity=0.212 Sum_probs=79.0
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCC-CCeEEEecchHHHHhchh--------cCCCeEEEeccCCCCCC-----------
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFP-NLECTDFDLPHVVNGLES--------DLANLKYVGGDMFEAIP----------- 254 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p-~~~~~~~Dl~~~~~~a~~--------~~~rv~~~~~d~~~~~p----------- 254 (306)
.+...||++|||-=.....+. .| +++++-+|.|.+++..++ ..++..+++.|+.+.+.
T Consensus 101 ~g~~QvV~LGaGlDTra~Rl~--~~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 101 DGIRQFVILASGLDSRAYRLD--WPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPS 178 (310)
T ss_dssp TTCCEEEEETCTTCCHHHHSC--CCTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTT
T ss_pred hCCCeEEEeCCCCCchhhhcc--CCCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCC
Confidence 456789999999887765554 24 478999999999998776 26789999999986211
Q ss_pred CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCC
Q 021867 255 PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIREN 302 (306)
Q Consensus 255 ~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~ 302 (306)
..-++++--+||++++++...+|+.+.+.+.| |..+++|.+.++
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~----gs~l~~d~~~~~ 222 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGLSAV----GSRIAVETSPLH 222 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHTCCT----TCEEEEECCCTT
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHhCCC----CeEEEEEecCCC
Confidence 14577888999999999999999999999888 455666766554
No 294
>3b73_A PHIH1 repressor-like protein; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 2.12A {Haloarcula marismortui atcc 43049}
Probab=97.07 E-value=0.00035 Score=52.34 Aligned_cols=62 Identities=19% Similarity=0.234 Sum_probs=52.0
Q ss_pred HhCcccccccCCCCCCHHHHHHhc--CCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhhc
Q 021867 37 ELGIPDIINKHGKPMTLNELVSAL--TINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLLK 112 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~--g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~~ 112 (306)
+..|++.|.++ ++.|+.+||+.+ ++ ++..+++.|+.|...|+++... .+.|++|+.+..+..
T Consensus 15 d~~IL~~L~~~-g~~s~~eLA~~l~~gi---S~~aVs~rL~~Le~~GLV~~~~----------rg~Y~LT~~G~~~l~ 78 (111)
T 3b73_A 15 DDRILEIIHEE-GNGSPKELEDRDEIRI---SKSSVSRRLKKLADHDLLQPLA----------NGVYVITEEGEAYLN 78 (111)
T ss_dssp HHHHHHHHHHH-SCBCHHHHHTSTTCCS---CHHHHHHHHHHHHHTTSEEECS----------TTCEEECHHHHHHHT
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHhcCC---CHHHHHHHHHHHHHCCCEEecC----------CceEEECchHHHHHH
Confidence 45577778654 799999999999 99 6899999999999999999875 468999999974443
No 295
>1y0u_A Arsenical resistance operon repressor, putative; structural genomics, protein structure initiative, PSI; HET: MSE; 1.60A {Archaeoglobus fulgidus} SCOP: a.4.5.5
Probab=97.02 E-value=0.00046 Score=50.11 Aligned_cols=62 Identities=15% Similarity=0.233 Sum_probs=51.7
Q ss_pred HHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhch
Q 021867 30 MSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASK 108 (306)
Q Consensus 30 ~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~ 108 (306)
.++..-.++.|+..| . ++.++.|||+.+|+ ++..+++.|+.|...|++.+.. +.|.+++.+.
T Consensus 26 ~~l~~~~r~~Il~~L-~--~~~~~~eLa~~l~i---s~~tv~~~L~~L~~~Glv~~~~-----------g~y~l~~~g~ 87 (96)
T 1y0u_A 26 YAVTNPVRRKILRML-D--KGRSEEEIMQTLSL---SKKQLDYHLKVLEAGFCIERVG-----------ERWVVTDAGK 87 (96)
T ss_dssp HHHSCHHHHHHHHHH-H--TTCCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEET-----------TEEEECTTTC
T ss_pred HHhCCHHHHHHHHHH-c--CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEEEC-----------CEEEECCCch
Confidence 445555677788888 5 78999999999999 7899999999999999999873 5888888654
No 296
>3pqk_A Biofilm growth-associated repressor; helix-turn-helix motif, winged-helix fold, transcriptional R DNA binding, transcription; 2.09A {Xylella fastidiosa} PDB: 3pqj_A
Probab=96.93 E-value=0.00085 Score=49.18 Aligned_cols=65 Identities=18% Similarity=0.203 Sum_probs=50.1
Q ss_pred HHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChh
Q 021867 30 MSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNA 106 (306)
Q Consensus 30 ~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~ 106 (306)
.+|..-.++.|+..|.. ++.++.|||+.+|+ ++..+++.|+.|...|++..... +....|++++.
T Consensus 18 ~~l~~~~r~~Il~~L~~--~~~~~~ela~~l~i---s~~tvs~~L~~L~~~Glv~~~~~-------g~~~~y~l~~~ 82 (102)
T 3pqk_A 18 KTLSHPVRLMLVCTLVE--GEFSVGELEQQIGI---GQPTLSQQLGVLRESGIVETRRN-------IKQIFYRLTEA 82 (102)
T ss_dssp HHHCSHHHHHHHHHHHT--CCBCHHHHHHHHTC---CTTHHHHHHHHHHHTTSEEEECS-------SSCCEEEECSS
T ss_pred HHcCCHHHHHHHHHHHh--CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCeEEEEe-------CCEEEEEECcH
Confidence 44555566777777765 78999999999999 67899999999999999998762 11345776653
No 297
>3jth_A Transcription activator HLYU; transcription factor, RTXA, DNA-binding, transcription regulation; 2.00A {Vibrio vulnificus}
Probab=96.88 E-value=0.0007 Score=49.24 Aligned_cols=66 Identities=15% Similarity=0.258 Sum_probs=52.1
Q ss_pred HHHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChh
Q 021867 29 SMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNA 106 (306)
Q Consensus 29 ~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~ 106 (306)
..++....++.|+..|.+ ++.|+.|||+.+|+ ++..+++.|+.|...|++..... +....|.+++.
T Consensus 17 ~~~l~~~~r~~Il~~L~~--~~~~~~ela~~l~i---s~~tvs~~L~~L~~~Glv~~~~~-------g~~~~y~l~~~ 82 (98)
T 3jth_A 17 LKAMANERRLQILCMLHN--QELSVGELCAKLQL---SQSALSQHLAWLRRDGLVTTRKE-------AQTVYYTLKSE 82 (98)
T ss_dssp HHHHCSHHHHHHHHHTTT--SCEEHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEECC-------TTCCEEEECCH
T ss_pred HHHcCCHHHHHHHHHHhc--CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCeEEEEe-------CCEEEEEECHH
Confidence 345555667888888876 79999999999999 78999999999999999998762 11344766653
No 298
>1xmk_A Double-stranded RNA-specific adenosine deaminase; winged helix-turn-helix, RNA editing, interferon, ADAR1, hydrolase; 0.97A {Homo sapiens} SCOP: a.4.5.19
Probab=96.75 E-value=0.00097 Score=46.59 Aligned_cols=60 Identities=10% Similarity=0.055 Sum_probs=48.2
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcc-hHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhch
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTR-CVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASK 108 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~-~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~ 108 (306)
+-.|+++|... +|.|+.+||+.+|+ ... .+++.|..|...|+++.... +.-.|.+|+.+.
T Consensus 13 ~~~IL~~Lk~~-g~~ta~eiA~~Lgi---t~~~aVr~hL~~Le~eGlV~~~~~--------gRP~w~LT~~g~ 73 (79)
T 1xmk_A 13 KEKICDYLFNV-SDSSALNLAKNIGL---TKARDINAVLIDMERQGDVYRQGT--------TPPIWHLTDKKR 73 (79)
T ss_dssp HHHHHHHHHHT-CCEEHHHHHHHHCG---GGHHHHHHHHHHHHHTTSEEEECS--------SSCEEEECHHHH
T ss_pred HHHHHHHHHHc-CCcCHHHHHHHcCC---CcHHHHHHHHHHHHHCCCEEecCC--------CCCCeEeCHhHH
Confidence 44566777765 79999999999999 566 99999999999999996642 223799998775
No 299
>3mq0_A Transcriptional repressor of the blcabc operon; helix-turn-helix, GAF fold, transcription repressor; 1.79A {Agrobacterium tumefaciens}
Probab=96.71 E-value=0.00072 Score=59.10 Aligned_cols=58 Identities=16% Similarity=0.238 Sum_probs=47.9
Q ss_pred hCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhch
Q 021867 38 LGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASK 108 (306)
Q Consensus 38 lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~ 108 (306)
+.|+++|...++++|+.|||+.+|+ +...+.|+|+.|+..|++.++. +++|++.+...
T Consensus 33 l~IL~~l~~~~~~ltl~eia~~lgl---~ksTv~RlL~tL~~~G~v~~~~----------~~~Y~LG~~~~ 90 (275)
T 3mq0_A 33 VRILDLVAGSPRDLTAAELTRFLDL---PKSSAHGLLAVMTELDLLARSA----------DGTLRIGPHSL 90 (275)
T ss_dssp HHHHHHHHHCSSCEEHHHHHHHHTC---C--CHHHHHHHHHHTTSEEECT----------TSEEEECTHHH
T ss_pred HHHHHHHhhCCCCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEECC----------CCcEEehHHHH
Confidence 4577888765578999999999999 5789999999999999999885 47899998543
No 300
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=96.64 E-value=0.004 Score=55.53 Aligned_cols=68 Identities=12% Similarity=0.107 Sum_probs=56.3
Q ss_pred hHHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHC-CCCeEEEecc-hHHHHhchh-cCCCeEEEeccCCC
Q 021867 182 ATRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAF-PNLECTDFDL-PHVVNGLES-DLANLKYVGGDMFE 251 (306)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~-p~~~~~~~Dl-~~~~~~a~~-~~~rv~~~~~d~~~ 251 (306)
+.+++++.+. ......+||..+|.|..+..|+++. |+.+++++|. |.+++.++. ..+|++++.++|.+
T Consensus 45 Ll~Evl~~L~--i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~ 115 (347)
T 3tka_A 45 LLDEAVNGLN--IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSA 115 (347)
T ss_dssp TTHHHHHHTC--CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGG
T ss_pred cHHHHHHhhC--CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHH
Confidence 3466677666 5567899999999999999999984 7889999999 888888855 45789999998865
No 301
>3f6o_A Probable transcriptional regulator, ARSR family protein; transcriptional regulator,RHA00566,MCSG, structural genomics, PSI-2; 1.90A {Rhodococcus SP}
Probab=96.62 E-value=0.00083 Score=50.78 Aligned_cols=67 Identities=12% Similarity=0.228 Sum_probs=53.0
Q ss_pred HHHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhc
Q 021867 29 SMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNAS 107 (306)
Q Consensus 29 ~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s 107 (306)
..+|..-.++.|+..|.. +|.++.+||+.+|+ ++..+++.|+.|...|++..... +....|++++..
T Consensus 12 ~~al~~~~R~~Il~~L~~--~~~~~~eLa~~l~i---s~~tvs~hL~~L~~~GlV~~~~~-------gr~~~y~l~~~~ 78 (118)
T 3f6o_A 12 FQALADPTRRAVLGRLSR--GPATVSELAKPFDM---ALPSFMKHIHFLEDSGWIRTHKQ-------GRVRTCAIEKEP 78 (118)
T ss_dssp HHHHTSHHHHHHHHHHHT--CCEEHHHHHTTCCS---CHHHHHHHHHHHHHTTSEEEEEE-------TTEEEEEECSHH
T ss_pred HHHhCCHHHHHHHHHHHh--CCCCHHHHHHHhCc---CHHHHHHHHHHHHHCCCeEEEec-------CCEEEEEECHHH
Confidence 355666667788888875 79999999999999 78999999999999999988762 112457777754
No 302
>1u2w_A CADC repressor, cadmium efflux system accessory protein; LEAD, SOFT metal ION resistance, ARSR/SM family, DNA binding protein; 1.90A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 3f72_A
Probab=96.62 E-value=0.0012 Score=50.18 Aligned_cols=68 Identities=10% Similarity=0.108 Sum_probs=51.7
Q ss_pred HHHHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChh
Q 021867 28 NSMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNA 106 (306)
Q Consensus 28 ~~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~ 106 (306)
...+|....++.|+..|... ++.|+.+||+.+|+ ++..+.+.|+.|...|++..... +....|++++.
T Consensus 35 ~~~al~~~~rl~IL~~L~~~-~~~s~~eLa~~l~i---s~stvs~~L~~L~~~Glv~~~~~-------gr~~~y~l~~~ 102 (122)
T 1u2w_A 35 ILKAIADENRAKITYALCQD-EELCVCDIANILGV---TIANASHHLRTLYKQGVVNFRKE-------GKLALYSLGDE 102 (122)
T ss_dssp HHHHHHSHHHHHHHHHHHHS-SCEEHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEC-----------CCEEEESCH
T ss_pred HHHHhCCHHHHHHHHHHHHC-CCcCHHHHHHHHCc---CHHHHHHHHHHHHHCCCeEEEEE-------CCEEEEEECHH
Confidence 34555566678888888743 78999999999999 78999999999999999998652 11235777764
No 303
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.61 E-value=0.0027 Score=53.60 Aligned_cols=101 Identities=15% Similarity=0.109 Sum_probs=66.3
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHhc----hh-cCCCeEEEec-cCCC-CCCCc
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNGL----ES-DLANLKYVGG-DMFE-AIPPA 256 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~a----~~-~~~rv~~~~~-d~~~-~~p~~ 256 (306)
..+.+.+. +....+|||+||+.|.++...+....-.+++++|+-..-..- +. ..+-|+|..+ |++. +.-.+
T Consensus 68 ~ei~ek~~--l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~~~~ 145 (267)
T 3p8z_A 68 QWFVERNM--VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPPEKC 145 (267)
T ss_dssp HHHHHTTS--SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCCCCC
T ss_pred HHHHHhcC--CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecCCccc
Confidence 44556553 666779999999999999988887766689999983221111 11 4578999999 9876 32348
Q ss_pred cEEEehhhhccCC-chHH---HHHHHHHHHhcCC
Q 021867 257 DAVLLKWILHDWN-DEEC---VKILKKCKEAVTS 286 (306)
Q Consensus 257 D~~~~~~vlh~~~-d~~~---~~iL~~~~~~L~p 286 (306)
|.+++-..=-.=+ .-+. .++|.-+.+.|++
T Consensus 146 DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~ 179 (267)
T 3p8z_A 146 DTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN 179 (267)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS
T ss_pred cEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc
Confidence 9988755442211 1122 2355666678876
No 304
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.60 E-value=0.0059 Score=52.23 Aligned_cols=104 Identities=17% Similarity=0.119 Sum_probs=62.6
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCC----CeEEEecchHHHHhchhcCCCe---EEEec-cCCCCCC-
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPN----LECTDFDLPHVVNGLESDLANL---KYVGG-DMFEAIP- 254 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~----~~~~~~Dl~~~~~~a~~~~~rv---~~~~~-d~~~~~p- 254 (306)
.++.+.+ .+.+..+|||+||+.|.++...+++-+- -.+++.|+ +...... ....+ +|..+ ||++..+
T Consensus 63 ~EIdeK~--likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~~~P~~~-~~~Gv~~i~~~~G~Df~~~~~~ 138 (269)
T 2px2_A 63 RWLVERR--FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-HEEPMLM-QSYGWNIVTMKSGVDVFYKPSE 138 (269)
T ss_dssp HHHHHTT--SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-SCCCCCC-CSTTGGGEEEECSCCGGGSCCC
T ss_pred HHHHHcC--CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-ccCCCcc-cCCCceEEEeeccCCccCCCCC
Confidence 4555554 4778899999999999999999885211 12344442 1111100 11344 66667 9998444
Q ss_pred CccEEEehhhhccCC----chH-HHHHHHHHHHhcCCCCCCc-EEEE
Q 021867 255 PADAVLLKWILHDWN----DEE-CVKILKKCKEAVTSDDKKG-KVII 295 (306)
Q Consensus 255 ~~D~~~~~~vlh~~~----d~~-~~~iL~~~~~~L~p~~~gg-~lli 295 (306)
.+|+|++-..-. -. |.. ....|.-+.+.|+| || .+++
T Consensus 139 ~~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~---gG~~Fvv 181 (269)
T 2px2_A 139 ISDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSR---GPKEFCI 181 (269)
T ss_dssp CCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTT---CCSEEEE
T ss_pred CCCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhc---CCcEEEE
Confidence 589998866442 11 111 12246667789999 77 6665
No 305
>3r4k_A Transcriptional regulator, ICLR family; DNA/RNA-binding 3-helical bundle, profilin-like, structural joint center for structural genomics, JCSG; 2.46A {Ruegeria SP}
Probab=96.56 E-value=0.0012 Score=57.22 Aligned_cols=60 Identities=25% Similarity=0.298 Sum_probs=49.9
Q ss_pred hCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchh
Q 021867 38 LGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKL 109 (306)
Q Consensus 38 lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~ 109 (306)
+.|+++|...++++|+.|||+++|+ +...+.|+|+.|...|++.++.. .++|++.+....
T Consensus 9 l~IL~~l~~~~~~lsl~eia~~lgl---~ksT~~RlL~tL~~~G~v~~~~~---------~~~Y~lG~~~~~ 68 (260)
T 3r4k_A 9 LTLLTYFNHGRLEIGLSDLTRLSGM---NKATVYRLMSELQEAGFVEQVEG---------ARSYRLGPQVLR 68 (260)
T ss_dssp HHHHTTCBTTBSEEEHHHHHHHHCS---CHHHHHHHHHHHHHTTSEEECSS---------SSEEEECTTHHH
T ss_pred HHHHHHHhhCCCCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEEcCC---------CCcEEcCHHHHH
Confidence 4577778764478999999999999 67999999999999999998752 488999885443
No 306
>2oqg_A Possible transcriptional regulator, ARSR family P; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 1.54A {Rhodococcus SP}
Probab=96.55 E-value=0.0012 Score=49.32 Aligned_cols=65 Identities=14% Similarity=0.194 Sum_probs=49.2
Q ss_pred HHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhch
Q 021867 32 LKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASK 108 (306)
Q Consensus 32 l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~ 108 (306)
+....++.|+..|.. ++.|+.+||+.+|+ ++..+.++|+.|...|++..... +....|.+++.+.
T Consensus 18 l~~~~r~~IL~~L~~--~~~~~~ela~~l~i---s~~tv~~~l~~L~~~gli~~~~~-------gr~~~y~l~~~~~ 82 (114)
T 2oqg_A 18 LSDETRWEILTELGR--ADQSASSLATRLPV---SRQAIAKHLNALQACGLVESVKV-------GREIRYRALGAEL 82 (114)
T ss_dssp TTCHHHHHHHHHHHH--SCBCHHHHHHHSSS---CHHHHHHHHHHHHHTTSEEEEEE-------TTEEEEEECSHHH
T ss_pred hCChHHHHHHHHHHc--CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCeeEEec-------CCEEEEEechHHH
Confidence 333456667777743 68999999999999 78999999999999999998652 0123378887654
No 307
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.49 E-value=0.0078 Score=52.48 Aligned_cols=106 Identities=15% Similarity=0.190 Sum_probs=67.3
Q ss_pred HHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecchHHHHh----chh-cCCCeEEEec-cCCC-CCCCc
Q 021867 184 RVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDLPHVVNG----LES-DLANLKYVGG-DMFE-AIPPA 256 (306)
Q Consensus 184 ~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl~~~~~~----a~~-~~~rv~~~~~-d~~~-~~p~~ 256 (306)
..+.+.+. +....+|||+||++|.++...+....-.+++++|+-..-.. .++ ...-|+|..+ |++. +...+
T Consensus 84 ~ei~~~~~--l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~~~~ 161 (321)
T 3lkz_A 84 RWLVERRF--LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPSECC 161 (321)
T ss_dssp HHHHHTTS--CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCCCCC
T ss_pred HHHHHhcC--CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCCCCC
Confidence 44455544 56667999999999999998887776668999998221000 111 2244899998 9876 32358
Q ss_pred cEEEehhhhccCCch--HH---HHHHHHHHHhcCCCCCC-cEEEE
Q 021867 257 DAVLLKWILHDWNDE--EC---VKILKKCKEAVTSDDKK-GKVII 295 (306)
Q Consensus 257 D~~~~~~vlh~~~d~--~~---~~iL~~~~~~L~p~~~g-g~lli 295 (306)
|++++--. ---+.+ +. .++|.-+.+.|++ + |-++|
T Consensus 162 D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~---~~~~f~~ 202 (321)
T 3lkz_A 162 DTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHR---GPREFCV 202 (321)
T ss_dssp SEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTT---CCCEEEE
T ss_pred CEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhcc---CCCcEEE
Confidence 98887554 211221 22 3356666788987 5 56555
No 308
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.48 E-value=0.0029 Score=55.39 Aligned_cols=97 Identities=15% Similarity=0.128 Sum_probs=67.4
Q ss_pred cCCCeEEEecCCccHHHHHHHHHC-----CCCeEEEecc----hH-----------------------HHHhchh-----
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAF-----PNLECTDFDL----PH-----------------------VVNGLES----- 237 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~-----p~~~~~~~Dl----~~-----------------------~~~~a~~----- 237 (306)
..+..||++|+..|..+..++... |+.+++++|. |+ ..+.+++
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 457899999999999998887654 4778999984 11 1222333
Q ss_pred -c-CCCeEEEeccCCCC---CC--CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeee
Q 021867 238 -D-LANLKYVGGDMFEA---IP--PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMI 299 (306)
Q Consensus 238 -~-~~rv~~~~~d~~~~---~p--~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~ 299 (306)
. .++|+++.||+.+- .+ .+|++++---.+ +.....|..+.+.|+| || ++|+|-+
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y----~~~~~~Le~~~p~L~p---GG-iIv~DD~ 245 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY----ESTWDTLTNLYPKVSV---GG-YVIVDDY 245 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSH----HHHHHHHHHHGGGEEE---EE-EEEESSC
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc----ccHHHHHHHHHhhcCC---CE-EEEEcCC
Confidence 2 48999999999762 32 488888864211 2245789999999999 55 5555443
No 309
>1r1u_A CZRA, repressor protein; zinc, DNA binding, transcriptional regulation, winged HTH protein, transcription repressor; 2.00A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 1r1v_A 2kjb_A 2kjc_A
Probab=96.44 E-value=0.0015 Score=48.30 Aligned_cols=52 Identities=10% Similarity=0.184 Sum_probs=42.7
Q ss_pred HHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 31 SLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 31 ~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
++..-.++.|+..|.. ++.++.|||+.+|+ ++..+++.|+.|...|++....
T Consensus 22 ~l~~~~r~~IL~~L~~--~~~~~~ela~~l~i---s~stvs~~L~~L~~~Glv~~~~ 73 (106)
T 1r1u_A 22 ALGDYNRIRIMELLSV--SEASVGHISHQLNL---SQSNVSHQLKLLKSVHLVKAKR 73 (106)
T ss_dssp HTCSHHHHHHHHHHHH--CCBCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEE
T ss_pred HhCCHHHHHHHHHHHh--CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCeEEEE
Confidence 3334455666666764 68999999999999 7899999999999999999875
No 310
>3f6v_A Possible transcriptional regulator, ARSR family protein; probable transcriptional repressor ARSR family, structural genomics, PSI-2; 1.48A {Rhodococcus SP}
Probab=96.42 E-value=0.0016 Score=51.57 Aligned_cols=69 Identities=12% Similarity=0.164 Sum_probs=56.7
Q ss_pred HHHHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhc
Q 021867 28 NSMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNAS 107 (306)
Q Consensus 28 ~~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s 107 (306)
...+|..-.++.|+..|.. ++.++.+||+.+|+ ++..+.+.|+.|...|+++.... +....|++++.+
T Consensus 51 ~l~aL~~p~R~~IL~~L~~--~~~t~~eLa~~lgl---s~stvs~hL~~L~~aGlV~~~~~-------Gr~~~y~lt~~~ 118 (151)
T 3f6v_A 51 QLEVAAEPTRRRLVQLLTS--GEQTVNNLAAHFPA---SRSAISQHLRVLTEAGLVTPRKD-------GRFRYYRLDPQG 118 (151)
T ss_dssp HHHHHTSHHHHHHHHHGGG--CCEEHHHHHTTSSS---CHHHHHHHHHHHHHTTSEEEEEE-------TTEEEEEECHHH
T ss_pred HHHHhCCHHHHHHHHHHHh--CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEEEec-------CCEEEEEEChHH
Confidence 4667777889999999985 79999999999999 78999999999999999998762 112358888755
Q ss_pred h
Q 021867 108 K 108 (306)
Q Consensus 108 ~ 108 (306)
.
T Consensus 119 ~ 119 (151)
T 3f6v_A 119 L 119 (151)
T ss_dssp H
T ss_pred H
Confidence 4
No 311
>3cuo_A Uncharacterized HTH-type transcriptional regulato; DNA-binding transcriptional regulator, structural genomics, MCSG; 2.00A {Escherichia coli K12}
Probab=96.41 E-value=0.0019 Score=46.65 Aligned_cols=66 Identities=14% Similarity=0.158 Sum_probs=50.1
Q ss_pred HHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhc
Q 021867 31 SLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNAS 107 (306)
Q Consensus 31 ~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s 107 (306)
++....++.|+..|.. +++.|+.|||+.+|+ ++..+.+.|+.|...|++..... +....|.+++.+
T Consensus 20 ~l~~~~~~~il~~l~~-~~~~s~~ela~~l~i---s~~tvs~~l~~L~~~glv~~~~~-------~r~~~y~l~~~~ 85 (99)
T 3cuo_A 20 AMSHPKRLLILCMLSG-SPGTSAGELTRITGL---SASATSQHLARMRDEGLIDSQRD-------AQRILYSIKNEA 85 (99)
T ss_dssp HHCSHHHHHHHHHHTT-CCSEEHHHHHHHHCC---CHHHHHHHHHHHHHTTSEEEEEC-------SSCEEEEECCHH
T ss_pred HhCChHHHHHHHHHHh-CCCcCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEEEec-------CCEEEEEEChHH
Confidence 3444556677777765 369999999999999 78999999999999999998752 112346676644
No 312
>1qgp_A Protein (double stranded RNA adenosine deaminase); Z-alpha-Z-DNA binding domain, RNA-editing, Z-DNA recognition, ADAR1, helix- turn-helix; NMR {Homo sapiens} SCOP: a.4.5.19
Probab=96.37 E-value=0.0023 Score=44.56 Aligned_cols=58 Identities=17% Similarity=0.229 Sum_probs=45.1
Q ss_pred HhCcccccccCC--CCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecCh
Q 021867 37 ELGIPDIINKHG--KPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKN 105 (306)
Q Consensus 37 ~lglfd~L~~~~--~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~ 105 (306)
+..|+++|...+ .++|+.|||+++|+ +...+.+.|+-|...|++..... .++.|..++
T Consensus 16 ~~~IL~~L~~~~~~~~~t~~eLA~~Lgv---s~~tV~~~L~~L~~~G~I~~~g~--------~~~~W~i~~ 75 (77)
T 1qgp_A 16 EQRILKFLEELGEGKATTAHDLSGKLGT---PKKEINRVLYSLAKKGKLQKEAG--------TPPLWKIAV 75 (77)
T ss_dssp HHHHHHHHHHHCSSSCEEHHHHHHHHCC---CHHHHHHHHHHHHHHTSEEEECS--------SSCEEEECC
T ss_pred HHHHHHHHHHcCCCCCcCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEecCC--------CCCceEecC
Confidence 455666676531 38999999999999 67899999999999999988751 246676654
No 313
>2kko_A Possible transcriptional regulatory protein (possibly ARSR-family); NESG, DNA-binding, transcription regulation, WHTH, homodimer; NMR {Mycobacterium bovis} PDB: 3gw2_A
Probab=96.36 E-value=0.00098 Score=49.57 Aligned_cols=47 Identities=13% Similarity=0.217 Sum_probs=39.8
Q ss_pred HHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 36 VELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 36 ~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
.++.|+..|.. ++.|+.|||+.+|+ ++..+.+.|+.|...|++....
T Consensus 26 ~r~~IL~~L~~--~~~s~~eLa~~lgi---s~stvs~~L~~L~~~GlV~~~~ 72 (108)
T 2kko_A 26 RRLQILDLLAQ--GERAVEAIATATGM---NLTTASANLQALKSGGLVEARR 72 (108)
T ss_dssp TTHHHHHHHTT--CCEEHHHHHHHHTC---CHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHHHc--CCcCHHHHHHHHCc---CHHHHHHHHHHHHHCCCeEEEE
Confidence 34555556664 68999999999999 7899999999999999999775
No 314
>3ech_A MEXR, multidrug resistance operon repressor; winged helix, helix-turn-helix, protein-peptide complex; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.28 PDB: 1lnw_A 3mex_A
Probab=96.34 E-value=0.0079 Score=46.39 Aligned_cols=95 Identities=15% Similarity=0.198 Sum_probs=58.0
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHH-----HHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCce
Q 021867 9 DTELLEAQAHVWNHIFNFINSMSLK-----CAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFF 83 (306)
Q Consensus 9 ~~~~~~~~~~l~~~~~~~~~~~~l~-----~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l 83 (306)
++++......+...+...+....-. +..++.++..|..+ ++.|..+||+.+++ ++..+.++++.|...|++
T Consensus 6 ~~~l~~~l~~~~~~~~~~~~~~l~~~~~~lt~~~~~vL~~l~~~-~~~t~~eLa~~l~~---~~~tvs~~l~~L~~~Glv 81 (142)
T 3ech_A 6 NPDLMPALMAVFQHVRTRIQSELDCQRLDLTPPDVHVLKLIDEQ-RGLNLQDLGRQMCR---DKALITRKIRELEGRNLV 81 (142)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHT-TTCCHHHHHHHHC------CHHHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhC-CCcCHHHHHHHhCC---CHHHHHHHHHHHHHCCCE
Confidence 3444455555555444433332222 34566778888765 68999999999999 679999999999999999
Q ss_pred eeecccCCCCCCCCCCceecChhchhhh
Q 021867 84 AQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 84 ~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++...... .-.-.+.+|+.++.+.
T Consensus 82 ~r~~~~~D----rR~~~~~LT~~G~~~~ 105 (142)
T 3ech_A 82 RRERNPSD----QRSFQLFLTDEGLAIH 105 (142)
T ss_dssp EC--------------CCEECHHHHHHH
T ss_pred eeccCCCC----CCeeeeEECHHHHHHH
Confidence 98752100 0012367888776543
No 315
>1mkm_A ICLR transcriptional regulator; structural genomics, winged helix-turn-helix, PSI, protein structure initiative; 2.20A {Thermotoga maritima} SCOP: a.4.5.33 d.110.2.2
Probab=96.32 E-value=0.0024 Score=54.78 Aligned_cols=58 Identities=21% Similarity=0.375 Sum_probs=47.9
Q ss_pred hCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhch
Q 021867 38 LGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASK 108 (306)
Q Consensus 38 lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~ 108 (306)
+.|++.|..+++++|+.|||+.+|+ +...+.|+|+.|...|++++.. .+.|++++...
T Consensus 11 l~iL~~l~~~~~~~~~~ela~~~gl---~~stv~r~l~~L~~~G~v~~~~----------~~~Y~lg~~~~ 68 (249)
T 1mkm_A 11 FEILDFIVKNPGDVSVSEIAEKFNM---SVSNAYKYMVVLEEKGFVLRKK----------DKRYVPGYKLI 68 (249)
T ss_dssp HHHHHHHHHCSSCBCHHHHHHHTTC---CHHHHHHHHHHHHHTTSEEECT----------TSCEEECTHHH
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCcEEECC----------CCcEEECHHHH
Confidence 3456667654458999999999999 6799999999999999999873 58899988543
No 316
>2jsc_A Transcriptional regulator RV1994C/MT2050; cadmium, transcriptional repressor, solution structure, STRU genomics; NMR {Mycobacterium tuberculosis}
Probab=96.32 E-value=0.0015 Score=49.41 Aligned_cols=53 Identities=13% Similarity=0.045 Sum_probs=43.9
Q ss_pred HHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 30 MSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 30 ~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
.+|..-.++.|+..|.. ++.++.|||+.+|+ ++..+++.|+.|...|++....
T Consensus 16 ~aL~~~~r~~IL~~L~~--~~~~~~eLa~~lgi---s~stvs~~L~~L~~~GlV~~~~ 68 (118)
T 2jsc_A 16 RALADPTRCRILVALLD--GVCYPGQLAAHLGL---TRSNVSNHLSCLRGCGLVVATY 68 (118)
T ss_dssp HHHSSHHHHHHHHHHHT--TCCSTTTHHHHHSS---CHHHHHHHHHHHTTTTSEEEEE
T ss_pred HHhCCHHHHHHHHHHHc--CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCceEEEE
Confidence 34444556677777764 68999999999999 7899999999999999999875
No 317
>2xrn_A HTH-type transcriptional regulator TTGV; DNA-binding protein, tetramer gene regulator, cooperative DN binding, multidrug binding protein; 2.90A {Pseudomonas putida} PDB: 2xro_A
Probab=96.32 E-value=0.0017 Score=55.51 Aligned_cols=61 Identities=16% Similarity=0.195 Sum_probs=49.3
Q ss_pred hCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhh
Q 021867 38 LGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLL 110 (306)
Q Consensus 38 lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l 110 (306)
+.|++.|...++++|+.|||+.+|+ +...+.|+|+.|...|++.+... .++|++++....|
T Consensus 9 l~iL~~l~~~~~~~s~~ela~~~gl---~~stv~r~l~~L~~~G~v~~~~~---------~~~Y~lg~~~~~l 69 (241)
T 2xrn_A 9 ASIMRALGSHPHGLSLAAIAQLVGL---PRSTVQRIINALEEEFLVEALGP---------AGGFRLGPALGQL 69 (241)
T ss_dssp HHHHHHHHTCTTCEEHHHHHHHTTS---CHHHHHHHHHHHHTTTSEEECGG---------GCEEEECSHHHHH
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEEeCC---------CCeEEECHHHHHH
Confidence 3456667654458999999999999 67999999999999999998752 4789998865443
No 318
>2o0y_A Transcriptional regulator; ICLR-family, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.00A {Rhodococcus SP}
Probab=96.31 E-value=0.0031 Score=54.53 Aligned_cols=58 Identities=16% Similarity=0.292 Sum_probs=47.7
Q ss_pred hCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhch
Q 021867 38 LGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASK 108 (306)
Q Consensus 38 lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~ 108 (306)
+.|++.|...++++|+.|||+.+|+ +...+.|+|+.|...|++.+.. .+.|.+++...
T Consensus 26 l~iL~~l~~~~~~~~~~eia~~~gl---~kstv~r~l~tL~~~G~v~~~~----------~~~Y~lg~~~~ 83 (260)
T 2o0y_A 26 IDLLELFDAAHPTRSLKELVEGTKL---PKTTVVRLVATMCARSVLTSRA----------DGSYSLGPEML 83 (260)
T ss_dssp HHHHTTCBTTBSSBCHHHHHHHHCC---CHHHHHHHHHHHHHTTSEEECT----------TSCEEECHHHH
T ss_pred HHHHHHHhhCCCCcCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEECC----------CCeEEecHHHH
Confidence 4456777643478999999999999 6799999999999999999875 34899988543
No 319
>2jt1_A PEFI protein; solution structure, winged helix-turn-helix, transcripti regulatory protein, structural genomics, PSI-2; NMR {Salmonella typhimurium LT2}
Probab=96.28 E-value=0.0021 Score=44.69 Aligned_cols=37 Identities=16% Similarity=0.271 Sum_probs=34.5
Q ss_pred CCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 48 GKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 48 ~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
|+|.|+.|||+.+|+ ++..+++-|..|...|++.+..
T Consensus 22 g~~psv~EIa~~lgv---S~~TVrr~L~~Le~kG~I~R~~ 58 (77)
T 2jt1_A 22 GAPVKTRDIADAAGL---SIYQVRLYLEQLHDVGVLEKVN 58 (77)
T ss_dssp TSCEEHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEES
T ss_pred CCCcCHHHHHHHHCC---CHHHHHHHHHHHHHCCcEEecC
Confidence 589999999999999 6788999999999999999985
No 320
>2g7u_A Transcriptional regulator; ICLR family, structural genomics, PSI, protein structure initiative, midwest center for struc genomics; 2.30A {Rhodococcus SP}
Probab=96.27 E-value=0.0037 Score=53.94 Aligned_cols=60 Identities=17% Similarity=0.181 Sum_probs=49.8
Q ss_pred hCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 38 LGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 38 lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
+.|++.|...++++|+.|||+.+|+ +...+.|+|+.|...|++++. ++.|++++....|.
T Consensus 17 l~iL~~l~~~~~~~~~~eia~~~gl---~~stv~r~l~~L~~~G~v~~~-----------~~~Y~Lg~~~~~l~ 76 (257)
T 2g7u_A 17 FAVLLAFDAQRPNPTLAELATEAGL---SRPAVRRILLTLQKLGYVAGS-----------GGRWSLTPRVLSIG 76 (257)
T ss_dssp HHHHHTCSSSCSSCBHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEE-----------TTEEEECGGGHHHH
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEeC-----------CCEEEEcHHHHHHH
Confidence 3466777654478999999999999 679999999999999999986 38899998765444
No 321
>1qbj_A Protein (double-stranded RNA specific adenosine D (ADAR1)); protein-Z-DNA complex, hydrolase-DNA complex; HET: DNA; 2.10A {Homo sapiens} SCOP: a.4.5.19 PDB: 3f21_A* 3f22_A* 3f23_A* 3irr_A* 3irq_D* 2gxb_A 2acj_A 2l54_A
Probab=96.26 E-value=0.0048 Score=43.28 Aligned_cols=61 Identities=16% Similarity=0.241 Sum_probs=44.9
Q ss_pred HhCcccccccCC--CCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhch
Q 021867 37 ELGIPDIINKHG--KPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASK 108 (306)
Q Consensus 37 ~lglfd~L~~~~--~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~ 108 (306)
+..|+++|..++ .++|+.+||+++|+ +...+.+.|..|...|++..... .++.|...+...
T Consensus 12 ~~~IL~~L~~~~pg~~~t~~eLA~~Lgv---sr~tV~~~L~~Le~~G~I~~~g~--------~~~~W~i~~~~~ 74 (81)
T 1qbj_A 12 EQRILKFLEELGEGKATTAHDLSGKLGT---PKKEINRVLYSLAKKGKLQKEAG--------TPPLWKIAVSTQ 74 (81)
T ss_dssp HHHHHHHHHHHCTTCCBCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEESS--------SSCEEEEC----
T ss_pred HHHHHHHHHHcCCCCCcCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEecCC--------CCCeeEEeCcHH
Confidence 444666666531 37999999999999 67899999999999999998641 257787776554
No 322
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=96.25 E-value=0.18 Score=44.95 Aligned_cols=104 Identities=14% Similarity=0.233 Sum_probs=82.4
Q ss_pred CCCeEEEecCCccHHHHHHHHH-CCCCeEEEecchHHHHhchh----------------------------cCCCeEEEe
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKA-FPNLECTDFDLPHVVNGLES----------------------------DLANLKYVG 246 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~-~p~~~~~~~Dl~~~~~~a~~----------------------------~~~rv~~~~ 246 (306)
+...||-+|||.=.....+... .++++++=+|.|++++.=++ ..++.++++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~ 169 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIG 169 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEc
Confidence 4678999999988888888765 36788999999998774111 157899999
Q ss_pred ccCCCC-----------CC--CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCCC
Q 021867 247 GDMFEA-----------IP--PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIRENK 303 (306)
Q Consensus 247 ~d~~~~-----------~p--~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~~ 303 (306)
.|+.+. ++ ..-++++=-+|.+++.+++..+|+.+.+..++ |.+++.|.+-|++
T Consensus 170 ~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~~----~~~i~yE~i~p~d 235 (334)
T 3iei_A 170 ADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFER----AMFINYEQVNMGD 235 (334)
T ss_dssp CCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSS----EEEEEEEECCTTS
T ss_pred cccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCCC----ceEEEEeccCCCC
Confidence 999871 11 24577888889999999999999999998875 7888899986654
No 323
>3df8_A Possible HXLR family transcriptional factor; APC89000, structural genomics, midwest center for structural genomics, MCSG; 1.65A {Thermoplasma volcanium} SCOP: a.4.5.0
Probab=96.20 E-value=0.003 Score=47.14 Aligned_cols=73 Identities=15% Similarity=0.242 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccccccCCCCCC--HHHHHHhc-CCCCCCcchHHHHHHHHHHcCceeeecccCCCC
Q 021867 17 AHVWNHIFNFINSMSLKCAVELGIPDIINKHGKPMT--LNELVSAL-TINPSKTRCVYRLMRILIHSGFFAQQTLNSSRN 93 (306)
Q Consensus 17 ~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~t--~~eLA~~~-g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~ 93 (306)
..+++.+.+.|...+|. .|.. ++.+ +.||++.+ |+ ++..+.+.|+.|...|++++...
T Consensus 18 ~~~l~~l~~~wrl~IL~---------~L~~--g~~~~~~~eL~~~l~gi---s~~~ls~~L~~Le~~GlV~r~~~----- 78 (111)
T 3df8_A 18 ESVLHLLGKKYTMLIIS---------VLGN--GSTRQNFNDIRSSIPGI---SSTILSRRIKDLIDSGLVERRSG----- 78 (111)
T ss_dssp SSTHHHHHSTTHHHHHH---------HHTS--SSSCBCHHHHHHTSTTC---CHHHHHHHHHHHHHTTSEEEEES-----
T ss_pred HHHHHHHcCccHHHHHH---------HHhc--CCCCCCHHHHHHHccCC---CHHHHHHHHHHHHHCCCEEEeec-----
Confidence 34455555565554444 4443 6777 99999999 99 78999999999999999998741
Q ss_pred CCCCCCceecChhchhhh
Q 021867 94 NNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 94 ~~~~~~~y~~t~~s~~l~ 111 (306)
-...|++|+.++.+.
T Consensus 79 ---r~~~y~LT~~G~~l~ 93 (111)
T 3df8_A 79 ---QITTYALTEKGMNVR 93 (111)
T ss_dssp ---SSEEEEECHHHHHHH
T ss_pred ---CcEEEEECccHHHHH
Confidence 135799999887554
No 324
>1oyi_A Double-stranded RNA-binding protein; (alpha+beta) helix-turn-helix, viral protein; NMR {Vaccinia virus} SCOP: a.4.5.19
Probab=96.13 E-value=0.0039 Score=43.67 Aligned_cols=59 Identities=15% Similarity=0.155 Sum_probs=46.0
Q ss_pred HHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhc
Q 021867 36 VELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNAS 107 (306)
Q Consensus 36 ~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s 107 (306)
....|+++|..+ +.|+.|||+++|+ +...+++.|..|...|++.... +.+-.|+.+...
T Consensus 18 ~~~~IL~lL~~~--g~sa~eLAk~Lgi---Sk~aVr~~L~~Le~eG~I~~~~--------~~PP~W~~~~~~ 76 (82)
T 1oyi_A 18 IVCEAIKTIGIE--GATAAQLTRQLNM---EKREVNKALYDLQRSAMVYSSD--------DIPPRWFMTTEA 76 (82)
T ss_dssp HHHHHHHHHSSS--TEEHHHHHHHSSS---CHHHHHHHHHHHHHHTSSEECS--------SSSCEEESCC--
T ss_pred HHHHHHHHHHHc--CCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEeCC--------CCCCcceeccCc
Confidence 345567788763 3999999999999 6799999999999999999875 235567766543
No 325
>1ub9_A Hypothetical protein PH1061; helix-turn-helix motif, winged helix motif, structural genom transcription; 2.05A {Pyrococcus horikoshii} SCOP: a.4.5.28
Probab=96.10 E-value=0.0026 Score=46.01 Aligned_cols=71 Identities=13% Similarity=0.177 Sum_probs=53.1
Q ss_pred HHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhch
Q 021867 30 MSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASK 108 (306)
Q Consensus 30 ~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~ 108 (306)
.++....++.|+..|... ++.|+.+||+.+|+ ++..+.+.|+.|...|++....... ++....|.+|+.+.
T Consensus 11 ~~l~~~~~~~iL~~L~~~-~~~~~~ela~~l~i---s~~tvs~~l~~L~~~gli~~~~~~~----~~r~~~~~lt~~g~ 81 (100)
T 1ub9_A 11 HILGNPVRLGIMIFLLPR-RKAPFSQIQKVLDL---TPGNLDSHIRVLERNGLVKTYKVIA----DRPRTVVEITDFGM 81 (100)
T ss_dssp HHHHSHHHHHHHHHHHHH-SEEEHHHHHHHTTC---CHHHHHHHHHHHHHTTSEEEEEECS----SSCEEEEEECHHHH
T ss_pred cccCChHHHHHHHHHHhc-CCcCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEEEecCC----CcceEEEEECHHHH
Confidence 455666677778777643 68999999999999 7899999999999999999654100 01124588888775
No 326
>2ia2_A Putative transcriptional regulator; SAD, PSI-2, structural genomics, structure initiative, midwest center for structural genomic transcription; 2.10A {Rhodococcus SP}
Probab=96.08 E-value=0.0037 Score=54.15 Aligned_cols=57 Identities=16% Similarity=0.289 Sum_probs=47.7
Q ss_pred hCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhch
Q 021867 38 LGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASK 108 (306)
Q Consensus 38 lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~ 108 (306)
+.|+++|...++++|+.|||+.+|+ +...+.|+|+.|...|++.+. ++.|++++...
T Consensus 24 l~iL~~l~~~~~~~~~~eia~~~gl---~~stv~r~l~tL~~~G~v~~~-----------~~~Y~Lg~~~~ 80 (265)
T 2ia2_A 24 LAVIRCFDHRNQRRTLSDVARATDL---TRATARRFLLTLVELGYVATD-----------GSAFWLTPRVL 80 (265)
T ss_dssp HHHHHTCCSSCSSEEHHHHHHHHTC---CHHHHHHHHHHHHHHTSEEES-----------SSEEEECGGGG
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEec-----------CCEEEEcHHHH
Confidence 4466777654478999999999999 679999999999999999986 48899988543
No 327
>1r1t_A Transcriptional repressor SMTB; zinc, transcriptional regulation, winged HTH protein, DNA binding, transcription repressor; 1.70A {Synechococcus elongatus pcc 7942} SCOP: a.4.5.5 PDB: 1r23_A 1smt_A 1r22_A
Probab=96.04 E-value=0.004 Score=47.32 Aligned_cols=52 Identities=13% Similarity=0.242 Sum_probs=44.0
Q ss_pred HHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 31 SLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 31 ~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
+|..-.++.|+..|.+ ++.++.+||+.+|+ ++..+.+.|+.|...|++....
T Consensus 42 aL~~~~rl~IL~~L~~--~~~s~~ela~~lgi---s~stvs~~L~~Le~~Glv~~~~ 93 (122)
T 1r1t_A 42 VLADPNRLRLLSLLAR--SELCVGDLAQAIGV---SESAVSHQLRSLRNLRLVSYRK 93 (122)
T ss_dssp HHCCHHHHHHHHHHTT--CCBCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEE
T ss_pred HhCCHHHHHHHHHHHc--CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCeEEEE
Confidence 4444456778888875 68999999999999 7899999999999999999875
No 328
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=96.00 E-value=0.0049 Score=42.90 Aligned_cols=44 Identities=11% Similarity=0.183 Sum_probs=38.9
Q ss_pred cccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 40 IPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 40 lfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
|.+.|... +.++++|||+.+++ ++..++|-|+.|...|++.+.+
T Consensus 7 Il~~L~~~-g~vsv~eLa~~l~V---S~~TIRrdL~~Le~~G~l~R~~ 50 (78)
T 1xn7_A 7 VRDLLALR-GRMEAAQISQTLNT---PQPMINAMLQQLESMGKAVRIQ 50 (78)
T ss_dssp HHHHHHHS-CSBCHHHHHHHTTC---CHHHHHHHHHHHHHHTSEEEEC
T ss_pred HHHHHHHc-CCCcHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEEec
Confidence 45667664 79999999999999 7899999999999999999983
No 329
>2fu4_A Ferric uptake regulation protein; DNA binding domain, helix-turn-helix, DNA binding protein; 1.80A {Escherichia coli}
Probab=95.96 E-value=0.0039 Score=43.67 Aligned_cols=48 Identities=19% Similarity=0.393 Sum_probs=41.5
Q ss_pred HhCcccccccCC-CCCCHHHHHHhc-----CCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 37 ELGIPDIINKHG-KPMTLNELVSAL-----TINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 37 ~lglfd~L~~~~-~~~t~~eLA~~~-----g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
+..|++.|...+ ++.|++||++.+ ++ +...++|.|+.|...|++.+..
T Consensus 19 r~~IL~~l~~~~~~~~s~~el~~~l~~~~~~i---s~~TVyR~L~~L~~~Glv~~~~ 72 (83)
T 2fu4_A 19 RLKILEVLQEPDNHHVSAEDLYKRLIDMGEEI---GLATVYRVLNQFDDAGIVTRHN 72 (83)
T ss_dssp HHHHHHHHTSGGGSSBCHHHHHHHHHHTTCCC---CHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHhCCCC---CHhhHHHHHHHHHHCCCeEEEe
Confidence 455778887644 689999999999 88 7899999999999999999875
No 330
>3bdd_A Regulatory protein MARR; putative multiple antibiotic-resistance repressor, structura genomics, joint center for structural genomics, JCSG; 2.20A {Streptococcus suis}
Probab=95.91 E-value=0.026 Score=43.12 Aligned_cols=67 Identities=21% Similarity=0.254 Sum_probs=51.1
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.++..|... ++.|..+||+.+++ ++..+.+.++.|...|++.+..... +.-...|.+|+.+..+.
T Consensus 33 ~~~iL~~l~~~-~~~~~~ela~~l~i---s~~~vs~~l~~L~~~gli~~~~~~~----d~r~~~~~lT~~G~~~~ 99 (142)
T 3bdd_A 33 RYSILQTLLKD-APLHQLALQERLQI---DRAAVTRHLKLLEESGYIIRKRNPD----NQREVLVWPTEQAREAL 99 (142)
T ss_dssp HHHHHHHHHHH-CSBCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEECSS----STTCEEEEECHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCHHHHHHHHCC---CHHHHHHHHHHHHHCCCEEecCCCC----CCCeeEEEECHHHHHHH
Confidence 45567777654 68999999999999 7899999999999999999875211 00123488888887655
No 331
>2hzt_A Putative HTH-type transcriptional regulator YTCD; DNA-binding protein, HTH-type transcription regulators, structural genomics, PSI-2; HET: CSU MSE; 2.00A {Bacillus subtilis} SCOP: a.4.5.69
Probab=95.87 E-value=0.0089 Score=44.12 Aligned_cols=56 Identities=18% Similarity=0.205 Sum_probs=43.6
Q ss_pred CCCCHHHHHHhc-CCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 49 KPMTLNELVSAL-TINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 49 ~~~t~~eLA~~~-g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.++.||++.+ |+ ++..+.+.|+.|...|++++...... .-.-.|.+|+.++.+.
T Consensus 26 ~~~~~~eLa~~l~~i---s~~tls~~L~~Le~~GlI~r~~~~~d----~r~~~y~LT~~G~~l~ 82 (107)
T 2hzt_A 26 GKKRTSELKRLMPNI---TQKMLTQQLRELEADGVINRIVYNQV----PPKVEYELSEYGRSLE 82 (107)
T ss_dssp CCBCHHHHHHHCTTS---CHHHHHHHHHHHHHTTSEEEEEECSS----SCEEEEEECTTGGGGH
T ss_pred CCCCHHHHHHHhcCC---CHHHHHHHHHHHHHCCCEEEeecCCC----CCeEEEEECccHHHHH
Confidence 689999999999 99 78999999999999999998753100 0013588888776543
No 332
>2y75_A HTH-type transcriptional regulator CYMR; DNA binding protein; 2.00A {Bacillus subtilis}
Probab=95.86 E-value=0.011 Score=45.22 Aligned_cols=49 Identities=18% Similarity=0.327 Sum_probs=39.6
Q ss_pred CCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhc
Q 021867 48 GKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNAS 107 (306)
Q Consensus 48 ~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s 107 (306)
++++|..+||+.+|+ ++..++++|+.|...|+++... +..|.|.+++..
T Consensus 24 ~~~~s~~ela~~~~i---~~~~v~~il~~L~~~Glv~~~~--------g~~ggy~L~~~~ 72 (129)
T 2y75_A 24 EGPTSLKSIAQTNNL---SEHYLEQLVSPLRNAGLVKSIR--------GAYGGYVLGSEP 72 (129)
T ss_dssp SCCBCHHHHHHHTTS---CHHHHHHHHHHHHHTTSEEEC------------CCEEESSCG
T ss_pred CCcCCHHHHHHHHCc---CHHHHHHHHHHHHHCCceEecC--------CCCCceEeCCCH
Confidence 378999999999999 7899999999999999998764 113678877643
No 333
>4g6q_A Putative uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.08A {Kribbella flavida}
Probab=95.85 E-value=0.018 Score=46.82 Aligned_cols=54 Identities=22% Similarity=0.375 Sum_probs=45.8
Q ss_pred HHHHHHHHHhCcccccccCCCCCCHHHHHHhcC-CCCCCcchHHHHHHHHHHcCceeeec
Q 021867 29 SMSLKCAVELGIPDIINKHGKPMTLNELVSALT-INPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 29 ~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g-~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
..+|.--.++.|+..|.. +|.|+.+||+.++ + ++..++++|+.|...|+++...
T Consensus 17 ~~~La~P~Rl~il~~L~~--~~~~~~~l~~~l~~~---~~~~~s~Hl~~L~~aglv~~~~ 71 (182)
T 4g6q_A 17 VDLLHHPLRWRITQLLIG--RSLTTRELAELLPDV---ATTTLYRQVGILVKAGVLMVTA 71 (182)
T ss_dssp HHHTTSHHHHHHHHHTTT--SCEEHHHHHHHCTTB---CHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHhCCHHHHHHHHHHHh--CCCCHHHHHHHhcCC---CHHHHHHHHHHHHHCCCeEEEE
Confidence 456666678888998975 7999999999996 7 5788999999999999998654
No 334
>4a5n_A Uncharacterized HTH-type transcriptional regulato; activator, DNA binding, MARR-like; 1.81A {Bacillus subtilis} PDB: 4a5m_A
Probab=95.81 E-value=0.028 Score=43.18 Aligned_cols=79 Identities=14% Similarity=0.108 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcccccccCCCCCCHHHHHHhc-CCCCCCcchHHHHHHHHHHcCceeeecccCCCC
Q 021867 15 AQAHVWNHIFNFINSMSLKCAVELGIPDIINKHGKPMTLNELVSAL-TINPSKTRCVYRLMRILIHSGFFAQQTLNSSRN 93 (306)
Q Consensus 15 ~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~-g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~ 93 (306)
+....++++.+-|...+|... .. ++.++.||++.+ |+ ++..|.+.|+.|...|++++......
T Consensus 15 pi~~~l~~lg~kW~l~IL~~L---------~~--g~~rf~eL~~~l~gI---s~~~Ls~~L~~Le~~GLV~R~~~~~d-- 78 (131)
T 4a5n_A 15 PVEFTLDVIGGKWKGILFYHM---------ID--GKKRFNEFRRICPSI---TQRMLTLQLRELEADGIVHREVYHQV-- 78 (131)
T ss_dssp HHHHHHHHHCSSSHHHHHHHH---------TT--SCBCHHHHHHHCTTS---CHHHHHHHHHHHHHTTSEEEEEECSS--
T ss_pred cHHHHHHHHcCcCHHHHHHHH---------hc--CCcCHHHHHHHhccc---CHHHHHHHHHHHHHCCCEEEEecCCC--
Confidence 456666777777766665543 22 799999999999 99 78999999999999999998753100
Q ss_pred CCCCCCceecChhchhhh
Q 021867 94 NNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 94 ~~~~~~~y~~t~~s~~l~ 111 (306)
.-.-.|.+|+.++.+.
T Consensus 79 --~r~v~y~LT~~G~~l~ 94 (131)
T 4a5n_A 79 --PPKVEYSLTEFGRTLE 94 (131)
T ss_dssp --SCEEEEEECTTGGGGH
T ss_pred --CCeEEEEECHhHHHHH
Confidence 0013599999988655
No 335
>1on2_A Transcriptional regulator MNTR; helix-turn-helix, DNA-binding protein, metalloregulatory protein; 1.61A {Bacillus subtilis} SCOP: a.4.5.24 a.76.1.1 PDB: 2ev0_A 1on1_A 2ev5_A 2ev6_A* 2f5c_A 2f5d_A 2f5e_A 2f5f_A 2hyf_A* 2hyg_D 3r60_A* 3r61_A*
Probab=95.76 E-value=0.0075 Score=46.71 Aligned_cols=50 Identities=16% Similarity=0.284 Sum_probs=44.4
Q ss_pred CCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 49 KPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 49 ~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.|+.+||+.+++ ++..+.++++.|...|++.+.. .+.|.+|+.+..+.
T Consensus 21 ~~~~~~ela~~l~v---s~~tvs~~l~~Le~~Glv~r~~----------~~~~~LT~~g~~~~ 70 (142)
T 1on2_A 21 GYARVSDIAEALAV---HPSSVTKMVQKLDKDEYLIYEK----------YRGLVLTSKGKKIG 70 (142)
T ss_dssp SSCCHHHHHHHHTS---CHHHHHHHHHHHHHTTSEEEET----------TTEEEECHHHHHHH
T ss_pred CCCCHHHHHHHhCC---CHHHHHHHHHHHHHCCCEEEee----------CceEEEchhHHHHH
Confidence 68999999999999 7899999999999999999885 47799999887544
No 336
>2k02_A Ferrous iron transport protein C; FEOC, iron-sulfur, metal-binding, metal binding protein; NMR {Klebsiella pneumoniae subsp}
Probab=95.75 E-value=0.0047 Score=43.91 Aligned_cols=44 Identities=11% Similarity=0.185 Sum_probs=39.0
Q ss_pred cccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 40 IPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 40 lfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
|.+.|... +.+++.|||+.+++ ++..++|.|+.|...|++.+..
T Consensus 7 Il~~L~~~-g~vsv~eLA~~l~V---S~~TIRrDL~~Le~~G~l~R~~ 50 (87)
T 2k02_A 7 VRDMLALQ-GRMEAKQLSARLQT---PQPLIDAMLERMEAMGKVVRIS 50 (87)
T ss_dssp HHHHHHHS-CSEEHHHHHHHTTC---CHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHc-CCCcHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEEEe
Confidence 45666654 79999999999999 7899999999999999999984
No 337
>3fm5_A Transcriptional regulator; MCSG, PF04017, PSI, MARR, structu genomics, protein structure initiative, midwest center for structural genomics; HET: GOL; 2.00A {Rhodococcus jostii}
Probab=95.72 E-value=0.013 Score=45.50 Aligned_cols=69 Identities=7% Similarity=0.085 Sum_probs=47.8
Q ss_pred HHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 36 VELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 36 ~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
.++.++..|...++++|..+||+.+++ ++..+.++++.|...|++++...... .-.-.+.+|+.++.+.
T Consensus 40 ~q~~vL~~l~~~~~~~t~~eLa~~l~i---~~~tvs~~l~~Le~~Glv~r~~~~~D----~R~~~~~LT~~G~~~~ 108 (150)
T 3fm5_A 40 RSYSVLVLACEQAEGVNQRGVAATMGL---DPSQIVGLVDELEERGLVVRTLDPSD----RRNKLIAATEEGRRLR 108 (150)
T ss_dssp HHHHHHHHHHHSTTCCCSHHHHHHHTC---CHHHHHHHHHHHHTTTSEEC---------------CEECHHHHHHH
T ss_pred HHHHHHHHHHhCCCCcCHHHHHHHHCC---CHhHHHHHHHHHHHCCCEEeeCCccc----cchheeeECHHHHHHH
Confidence 345566677654468999999999999 78999999999999999998652100 0012377888877544
No 338
>2qww_A Transcriptional regulator, MARR family; YP_013417.1, multiple antibiotic-resistance repressor (MARR) structural genomics; HET: MSE; 2.07A {Listeria monocytogenes str}
Probab=95.71 E-value=0.019 Score=44.69 Aligned_cols=67 Identities=16% Similarity=0.233 Sum_probs=49.3
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceee--ecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQ--QTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~--~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.++..|... ++.|..+||+.+++ ++..+.++++.|...|++++ ..... +.-.-.+.+|+.+..+.
T Consensus 43 ~~~iL~~l~~~-~~~t~~eLa~~l~~---~~~tvs~~l~~Le~~Glv~r~~~~~~~----d~R~~~~~LT~~G~~~~ 111 (154)
T 2qww_A 43 QLAMINVIYST-PGISVADLTKRLII---TGSSAAANVDGLISLGLVVKLNKTIPN----DSMDLTLKLSKKGEDLS 111 (154)
T ss_dssp HHHHHHHHHHS-TTEEHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEESCC--CT----TCTTCEEEECHHHHHHH
T ss_pred HHHHHHHHHHC-CCCCHHHHHHHHCC---CHHHHHHHHHHHHHCCCEEecCcCCCC----CCceeEeEECHHHHHHH
Confidence 45566777764 68999999999999 78999999999999999998 43100 00112478888877544
No 339
>2wte_A CSA3; antiviral protein, viral resistance, winged helix-turn-helix prnai nucleotide-binding domain; HET: MSE; 1.80A {Sulfolobus solfataricus}
Probab=95.66 E-value=0.0063 Score=52.08 Aligned_cols=62 Identities=15% Similarity=0.226 Sum_probs=50.5
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.++..|... ++.|..|||+.+|+ ++..+.|.|+.|...|++++.+. ...|.+|+.+..+.
T Consensus 154 ~~~IL~~L~~~-~~~s~~eLA~~lgl---sksTv~r~L~~Le~~GlV~r~~r---------~~~~~LT~~G~~l~ 215 (244)
T 2wte_A 154 EMKLLNVLYET-KGTGITELAKMLDK---SEKTLINKIAELKKFGILTQKGK---------DRKVELNELGLNVI 215 (244)
T ss_dssp HHHHHHHHHHH-TCBCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEETT---------TTEEEECHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEEeCC---------ccEEEECHHHHHHH
Confidence 34455555543 68999999999999 78999999999999999998742 47899999887654
No 340
>1r7j_A Conserved hypothetical protein SSO10A; winged helix-turn-helix, two-stranded antiparallel coiled CO structural genomics, PSI; 1.47A {Sulfolobus solfataricus} SCOP: a.4.5.49 PDB: 1xsx_A
Probab=95.63 E-value=0.013 Score=42.38 Aligned_cols=54 Identities=13% Similarity=0.220 Sum_probs=46.1
Q ss_pred ccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 41 PDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 41 fd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
+..|.. + ++..+||..+|+ +++.+++.++.|...|++++.. +.|.+|+.+..+.
T Consensus 14 L~~i~~--~-~~~t~La~~~~l---s~~~~~~~l~~L~~~GLI~~~~-----------~~~~LT~kG~~~l 67 (95)
T 1r7j_A 14 LEACKS--G-SPKTRIMYGANL---SYALTGRYIKMLMDLEIIRQEG-----------KQYMLTKKGEELL 67 (95)
T ss_dssp HHHHTT--C-BCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEET-----------TEEEECHHHHHHH
T ss_pred HHHHHc--C-CCHHHHHHHhCc---CHHHHHHHHHHHHHCCCeEEEC-----------CeeEEChhHHHHH
Confidence 344443 4 899999999999 7899999999999999999984 6799999998554
No 341
>2htj_A P fimbrial regulatory protein KS71A; winged helix-turn-helix, PAP PILI, transcription activator; NMR {Escherichia coli} SCOP: a.4.5.73
Probab=95.60 E-value=0.007 Score=42.23 Aligned_cols=44 Identities=18% Similarity=0.301 Sum_probs=37.7
Q ss_pred CcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeee
Q 021867 39 GIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQ 86 (306)
Q Consensus 39 glfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~ 86 (306)
.|++.|... ++.|..|||+.+|+ ++..+++.|+.|...|++...
T Consensus 4 ~Il~~L~~~-~~~s~~eLa~~lgv---s~~tv~r~L~~L~~~GlI~~~ 47 (81)
T 2htj_A 4 EILEFLNRH-NGGKTAEIAEALAV---TDYQARYYLLLLEKAGMVQRS 47 (81)
T ss_dssp HHHHHHHHS-CCCCHHHHHHHHTS---CHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHc-CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEEe
Confidence 355666653 68999999999999 789999999999999999965
No 342
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=95.58 E-value=0.028 Score=50.65 Aligned_cols=83 Identities=8% Similarity=0.098 Sum_probs=57.2
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh--cCCCeEEEeccCCC-C-C----CC------------
Q 021867 197 LNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES--DLANLKYVGGDMFE-A-I----PP------------ 255 (306)
Q Consensus 197 ~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~--~~~rv~~~~~d~~~-~-~----p~------------ 255 (306)
...|||||.|.|.++..|+++....+++++++ +..++..++ ..++++++.+|+++ . + .+
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~~~~~~~l~~~~~l~~~~~~~~~ 138 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYDWSTYSNLIDEERIFVPEVQSSD 138 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTCHHHHHHHTTTTCSSCCCCCCTT
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCccchhhHHHhhcccccccccccccc
Confidence 47899999999999999998754457888888 455554443 35799999999975 2 1 11
Q ss_pred ---ccEEEehhhhccCCchHHHHHHHH
Q 021867 256 ---ADAVLLKWILHDWNDEECVKILKK 279 (306)
Q Consensus 256 ---~D~~~~~~vlh~~~d~~~~~iL~~ 279 (306)
-.+.++.|.-++.+.+-..++|..
T Consensus 139 ~~~~~~~vvaNLPYnIstpil~~ll~~ 165 (353)
T 1i4w_A 139 HINDKFLTVANVTGEGSEGLIMQWLSC 165 (353)
T ss_dssp SEEEEEEEEEECCSTTHHHHHHHHHHH
T ss_pred cCCCceEEEEECCCchHHHHHHHHHHh
Confidence 125666776666655544445544
No 343
>1yyv_A Putative transcriptional regulator; reductive methylation, D lysine, structural genomics, PSI; HET: MLY; 2.35A {Salmonella typhimurium} SCOP: a.4.5.69
Probab=95.57 E-value=0.01 Score=45.65 Aligned_cols=79 Identities=11% Similarity=0.191 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcccccccCCCCCCHHHHHHhc-CCCCCCcchHHHHHHHHHHcCceeeecccCCCC
Q 021867 15 AQAHVWNHIFNFINSMSLKCAVELGIPDIINKHGKPMTLNELVSAL-TINPSKTRCVYRLMRILIHSGFFAQQTLNSSRN 93 (306)
Q Consensus 15 ~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~-g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~ 93 (306)
+...+++++.+.|...+|. .|.. ++.++.||++.+ |+ ++..+.+.|+.|...|++++......
T Consensus 24 ~~~~~l~~l~~~w~l~IL~---------~L~~--g~~~~~eLa~~l~gi---s~~tls~~L~~Le~~GlV~r~~~~~d-- 87 (131)
T 1yyv_A 24 PSREVLKHVTSRWGVLILV---------ALRD--GTHRFSDLRRXMGGV---SEXMLAQSLQALEQDGFLNRVSYPVV-- 87 (131)
T ss_dssp THHHHHHHHHSHHHHHHHH---------HGGG--CCEEHHHHHHHSTTC---CHHHHHHHHHHHHHHTCEEEEEECSS--
T ss_pred CHHHHHHHHcCCcHHHHHH---------HHHc--CCCCHHHHHHHhccC---CHHHHHHHHHHHHHCCcEEEEecCCC--
Confidence 4455566666666554443 3343 689999999999 79 78999999999999999998752100
Q ss_pred CCCCCCceecChhchhhh
Q 021867 94 NNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 94 ~~~~~~~y~~t~~s~~l~ 111 (306)
.-.-.|.+|+.++.+.
T Consensus 88 --~r~~~y~LT~~G~~l~ 103 (131)
T 1yyv_A 88 --PPHVEYSLTPLGEQVS 103 (131)
T ss_dssp --SCEEEEEECHHHHHHH
T ss_pred --CCeEEEEECccHHHHH
Confidence 0013599999887544
No 344
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=95.51 E-value=0.077 Score=50.55 Aligned_cols=104 Identities=11% Similarity=0.067 Sum_probs=66.5
Q ss_pred cCCCeEEEecCCccHHHHHHHHHC-------------CCCeEEEecc-hHHHHhchh-----cCCCeEEEeccCCC-CCC
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAF-------------PNLECTDFDL-PHVVNGLES-----DLANLKYVGGDMFE-AIP 254 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~-------------p~~~~~~~Dl-~~~~~~a~~-----~~~rv~~~~~d~~~-~~p 254 (306)
....+|+|-.||+|.++....+.. ....+.++|+ +.+...|+- ..+.-.+..+|.+. +..
T Consensus 216 ~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~ 295 (530)
T 3ufb_A 216 QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLR 295 (530)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGG
T ss_pred CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCchh
Confidence 345689999999999998765532 1346899999 666666654 33445677888875 321
Q ss_pred ------CccEEEehhhhcc---------CC-----chHHHHHHHHHHHhcCCC----CCCcEEEEEee
Q 021867 255 ------PADAVLLKWILHD---------WN-----DEECVKILKKCKEAVTSD----DKKGKVIIIDM 298 (306)
Q Consensus 255 ------~~D~~~~~~vlh~---------~~-----d~~~~~iL~~~~~~L~p~----~~gg~lli~e~ 298 (306)
.||+|+..=.+-. ++ .+....+++.+.+.|++. .+||++.|+=+
T Consensus 296 ~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP 363 (530)
T 3ufb_A 296 EMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVP 363 (530)
T ss_dssp GCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEE
T ss_pred hhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEec
Confidence 4899987644421 11 112245688888888620 01898887643
No 345
>1z7u_A Hypothetical protein EF0647; winged-helix-turn-helix, MARR, structural genomics, PSI, Pro structure initiative; 2.20A {Enterococcus faecalis} SCOP: a.4.5.69
Probab=95.45 E-value=0.0093 Score=44.42 Aligned_cols=79 Identities=16% Similarity=0.154 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcccccccCCCCCCHHHHHHhc-CCCCCCcchHHHHHHHHHHcCceeeecccCCCC
Q 021867 15 AQAHVWNHIFNFINSMSLKCAVELGIPDIINKHGKPMTLNELVSAL-TINPSKTRCVYRLMRILIHSGFFAQQTLNSSRN 93 (306)
Q Consensus 15 ~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~-g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~ 93 (306)
+...+++++.+.|...+|. .|.. ++.++.+||+.+ ++ ++..+.+.|+.|...|++++.....
T Consensus 11 ~~~~~l~~l~~~~~~~IL~---------~L~~--~~~~~~eLa~~l~~i---s~~tvs~~L~~Le~~GlI~r~~~~~--- 73 (112)
T 1z7u_A 11 SINLALSTINGKWKLSLMD---------ELFQ--GTKRNGELMRALDGI---TQRVLTDRLREMEKDGLVHRESFNE--- 73 (112)
T ss_dssp HHHHHHHTTCSTTHHHHHH---------HHHH--SCBCHHHHHHHSTTC---CHHHHHHHHHHHHHHTSEEEEEECC---
T ss_pred CHHHHHHHHcCccHHHHHH---------HHHh--CCCCHHHHHHHhccC---CHHHHHHHHHHHHHCCCEEEeecCC---
Confidence 3444555555555444443 3443 689999999999 99 7899999999999999999875210
Q ss_pred CCCCCCceecChhchhhh
Q 021867 94 NNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 94 ~~~~~~~y~~t~~s~~l~ 111 (306)
+.-.-.|.+|+.+..+.
T Consensus 74 -d~r~~~~~LT~~G~~~~ 90 (112)
T 1z7u_A 74 -LPPRVEYTLTPEGYALY 90 (112)
T ss_dssp -SSCEEEEEECHHHHHHH
T ss_pred -CCCeEEEEECHhHHHHH
Confidence 00013489999887543
No 346
>2lnb_A Z-DNA-binding protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, immune system; NMR {Homo sapiens}
Probab=95.44 E-value=0.0092 Score=40.78 Aligned_cols=55 Identities=16% Similarity=0.248 Sum_probs=47.1
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecC
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLK 104 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t 104 (306)
+-.|++.|.++|.|++..+||+.+|+ +..-+...|..|-..|.+..+. .-.|.++
T Consensus 21 eekVLe~LkeaG~PlkageIae~~Gv---dKKeVdKaik~LKkEgkI~SPk----------RCyw~~~ 75 (80)
T 2lnb_A 21 EQRILQVLTEAGSPVKLAQLVKECQA---PKRELNQVLYRMKKELKVSLTS----------PATWCLG 75 (80)
T ss_dssp HHHHHHHHHHHTSCEEHHHHHHHHTS---CHHHHHHHHHHHHHTTSEEEEE----------TTEEEES
T ss_pred HHHHHHHHHHcCCCCCHHHHHHHHCC---CHHHHHHHHHHHHHcCCccCCC----------CceeeCC
Confidence 44577788877899999999999999 7889999999999999999886 4667665
No 347
>3kp7_A Transcriptional regulator TCAR; multiple drug resistance, biofilm, transcription regulation, binding, transcription regulator; 2.30A {Staphylococcus epidermidis RP62A} PDB: 3kp3_A* 3kp4_A* 3kp5_A* 3kp2_A* 3kp6_A
Probab=95.39 E-value=0.054 Score=42.01 Aligned_cols=67 Identities=10% Similarity=0.209 Sum_probs=46.2
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec-ccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT-LNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~-~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.++..| .. ++.|..+||+.+++ ++..+.++++.|...|++.+.. ++.. +.-.-.+.+|+.+..+.
T Consensus 40 q~~iL~~l-~~-~~~t~~eLa~~l~~---~~~~vs~~l~~Le~~Glv~r~~~~~~~---D~R~~~~~lT~~G~~~~ 107 (151)
T 3kp7_A 40 QSHVLNML-SI-EALTVGQITEKQGV---NKAAVSRRVKKLLNAELVKLEKPDSNT---DQRLKIIKLSNKGKKYI 107 (151)
T ss_dssp HHHHHHHH-HH-SCBCHHHHHHHHCS---CSSHHHHHHHHHHHTTSEEC--------------CCBEECHHHHHHH
T ss_pred HHHHHHHH-Hc-CCcCHHHHHHHHCC---CHHHHHHHHHHHHHCCCEEeeCCCCCC---CCCeeEEEECHhHHHHH
Confidence 34477777 43 79999999999999 6799999999999999999731 0000 00012367777776443
No 348
>3lwf_A LIN1550 protein, putative transcriptional regulator; structural genomics, JOI for structural genomics, JCSG; HET: SO4; 2.06A {Listeria innocua}
Probab=95.37 E-value=0.021 Score=45.47 Aligned_cols=48 Identities=19% Similarity=0.380 Sum_probs=41.1
Q ss_pred CCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhc
Q 021867 49 KPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNAS 107 (306)
Q Consensus 49 ~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s 107 (306)
+++|.++||+.+++ ++..++++|..|...|++.... |..|.|.+++..
T Consensus 43 ~~~s~~eIA~~~~i---~~~~l~kil~~L~~aGlv~s~r--------G~~GGy~Lar~p 90 (159)
T 3lwf_A 43 GPISLRSIAQDKNL---SEHYLEQLIGPLRNAGIVKSIR--------GAHGGYVLNGDP 90 (159)
T ss_dssp CCBCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEC--------STTCEEEECSCT
T ss_pred CCcCHHHHHHHHCc---CHHHHHHHHHHHHHCCeEEEec--------CCCCceEecCCH
Confidence 68999999999999 7899999999999999999875 224678877643
No 349
>3r0a_A Putative transcriptional regulator; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.31A {Methanosarcina mazei}
Probab=95.37 E-value=0.0072 Score=45.92 Aligned_cols=48 Identities=13% Similarity=0.214 Sum_probs=40.3
Q ss_pred HhCcccccccCCCC-CCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 37 ELGIPDIINKHGKP-MTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 37 ~lglfd~L~~~~~~-~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
+..|+..|..+++| +|+.|||+.+++ +...+.|.|+.|...|++.+..
T Consensus 28 e~~il~~L~~~~~~~~t~~eLa~~l~~---s~sTV~r~L~~L~~~GlV~r~~ 76 (123)
T 3r0a_A 28 DLNVMKSFLNEPDRWIDTDALSKSLKL---DVSTVQRSVKKLHEKEILQRSQ 76 (123)
T ss_dssp HHHHHHHHHHSTTCCEEHHHHHHHHTS---CHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHCCCCCcCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEeeC
Confidence 44566666655456 999999999999 7899999999999999999864
No 350
>2gxg_A 146AA long hypothetical transcriptional regulator; winged helix; 1.45A {Sulfolobus tokodaii} PDB: 2eb7_A 2yr2_A 3gez_A 3gf2_A* 3gfi_A 3gfm_A 3gfj_A 3gfl_A
Probab=95.36 E-value=0.027 Score=43.27 Aligned_cols=66 Identities=8% Similarity=0.058 Sum_probs=49.2
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.++..|. . ++.|..+||+.+++ ++..+.++++.|...|++++..... +.-...+.+|+.+..+.
T Consensus 39 ~~~iL~~l~-~-~~~~~~ela~~l~~---s~~tvs~~l~~Le~~glv~r~~~~~----d~r~~~~~lT~~G~~~~ 104 (146)
T 2gxg_A 39 DFLVLRATS-D-GPKTMAYLANRYFV---TQSAITASVDKLEEMGLVVRVRDRE----DRRKILIEITEKGLETF 104 (146)
T ss_dssp HHHHHHHHT-T-SCBCHHHHHHHTTC---CHHHHHHHHHHHHHTTSEEEEECSS----CTTCEEEEECHHHHHHH
T ss_pred HHHHHHHHh-c-CCcCHHHHHHHhCC---CchhHHHHHHHHHHCCCEEeecCCC----CCceEEEEECHHHHHHH
Confidence 455667776 3 79999999999999 7899999999999999999875210 00112377888776543
No 351
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=95.35 E-value=0.052 Score=49.09 Aligned_cols=101 Identities=18% Similarity=0.137 Sum_probs=70.3
Q ss_pred hcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh-----------cCCCeEEEeccCCC--C-CC-Ccc
Q 021867 194 FEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES-----------DLANLKYVGGDMFE--A-IP-PAD 257 (306)
Q Consensus 194 ~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~-----------~~~rv~~~~~d~~~--~-~p-~~D 257 (306)
.....+|||+-+|.|.=+.+|++..++-+++..|+ +.-++..++ ...+|.+...|... + .+ .||
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD 225 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYD 225 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEE
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCC
Confidence 45577999999999999999999887778899998 333333322 23578999998876 1 23 589
Q ss_pred EEEeh--------hhh-------ccCCchH-------HHHHHHHHHHhcCCCCCCcEEEEEe
Q 021867 258 AVLLK--------WIL-------HDWNDEE-------CVKILKKCKEAVTSDDKKGKVIIID 297 (306)
Q Consensus 258 ~~~~~--------~vl-------h~~~d~~-------~~~iL~~~~~~L~p~~~gg~lli~e 297 (306)
.|++- .++ ..|..++ -.+||+++.+.++| ||+|+=..
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkp---GG~LVYsT 284 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKP---GGHVVYST 284 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEE---EEEEEEEE
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCC---CcEEEEEe
Confidence 99862 111 2222222 25789999999999 78776443
No 352
>1s3j_A YUSO protein; structural genomics, MARR transcriptional regulator family, PSI, protein structure initiative; HET: MSE; 2.25A {Bacillus subtilis} SCOP: a.4.5.28
Probab=95.35 E-value=0.035 Score=43.20 Aligned_cols=66 Identities=14% Similarity=0.224 Sum_probs=48.6
Q ss_pred hCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 38 LGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 38 lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
+.|+..|... ++.|..+||+.+++ ++..+.++++.|...|++++..... +.-.-.+.+|+.+..+.
T Consensus 40 ~~iL~~l~~~-~~~t~~ela~~l~~---s~~tvs~~l~~Le~~glv~r~~~~~----d~R~~~~~lT~~G~~~~ 105 (155)
T 1s3j_A 40 LFVLASLKKH-GSLKVSEIAERMEV---KPSAVTLMADRLEQKNLIARTHNTK----DRRVIDLSLTDEGDIKF 105 (155)
T ss_dssp HHHHHHHHHH-SEEEHHHHHHHHTS---CHHHHHHHHHHHHHTTSEEEEECSS----CTTSEEEEECHHHHHHH
T ss_pred HHHHHHHHHc-CCCCHHHHHHHHCC---CHHHHHHHHHHHHHCCCEeecCCCC----CCceEEEEECHHHHHHH
Confidence 4466667653 68999999999999 7899999999999999999875210 00012477888776543
No 353
>2f2e_A PA1607; transcription factor, helix-TRUN-helix, APC5613, structural genomics, PSI, protein structure initiative; HET: GLC; 1.85A {Pseudomonas aeruginosa} SCOP: a.4.5.69
Probab=95.26 E-value=0.016 Score=45.41 Aligned_cols=75 Identities=15% Similarity=0.179 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCC
Q 021867 18 HVWNHIFNFINSMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDE 97 (306)
Q Consensus 18 ~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~ 97 (306)
..++++.+.|...+|.. |.. ++.++.||++.+|+ ++..+.+.|+.|...|++++..... +.
T Consensus 16 ~~l~~l~~~w~l~IL~~---------L~~--g~~~~~eLa~~lgi---s~~tls~~L~~Le~~GlI~r~~~~~----d~- 76 (146)
T 2f2e_A 16 RPLDVIGDGWSMLIVRD---------AFE--GLTRFGEFQKSLGL---AKNILAARLRNLVEHGVMVAVPAES----GS- 76 (146)
T ss_dssp TTHHHHCSSSHHHHHHH---------HHT--TCCSHHHHHHHHCC---CHHHHHHHHHHHHHTTSEEEEECSS----SS-
T ss_pred HHHHHhCCchHHHHHHH---------HHh--CCCCHHHHHHHhCC---CHHHHHHHHHHHHHCCCEEEEecCC----CC-
Confidence 34555555555444433 333 68999999999999 7899999999999999999876210 11
Q ss_pred CCceecChhchhhh
Q 021867 98 EQGYVLKNASKLLL 111 (306)
Q Consensus 98 ~~~y~~t~~s~~l~ 111 (306)
.-.|.+|+.++.+.
T Consensus 77 ~~~y~LT~~G~~l~ 90 (146)
T 2f2e_A 77 HQEYRLTDKGRALF 90 (146)
T ss_dssp CEEEEECHHHHTTH
T ss_pred eEEEEECchHHHHH
Confidence 24689998876543
No 354
>1tbx_A ORF F-93, hypothetical 11.0 kDa protein; sulfolobus spindle virus, winged helix, fusellovirus; 2.70A {Sulfolobus virus 1} SCOP: a.4.5.48
Probab=95.26 E-value=0.012 Score=42.47 Aligned_cols=63 Identities=17% Similarity=0.296 Sum_probs=48.3
Q ss_pred hCcccccccCCCCCCHHHH----HHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 38 LGIPDIINKHGKPMTLNEL----VSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 38 lglfd~L~~~~~~~t~~eL----A~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
+.++..|... ++.|..+| |+.+++ ++..+.++++.|...|++++... .....|.+|+.++.+.
T Consensus 11 ~~iL~~l~~~-~~~~~~el~~~la~~l~i---s~~tvs~~l~~Le~~gli~r~~~-------~r~~~~~LT~~G~~~~ 77 (99)
T 1tbx_A 11 AIVLAYLYDN-EGIATYDLYKKVNAEFPM---STATFYDAKKFLIQEGFVKERQE-------RGEKRLYLTEKGKLFA 77 (99)
T ss_dssp HHHHHHHTTC-TTCBHHHHHHHHHTTSCC---CHHHHHHHHHHHHHTTSEEEEEE-------TTEEEEEECHHHHHHH
T ss_pred HHHHHHHHHc-CCcCHHHHHHHHHHHcCC---CHHHHHHHHHHHHHCCCEEEEec-------CCceEEEECHHHHHHH
Confidence 3455555543 68999999 999999 78999999999999999998652 0134578888887544
No 355
>1ylf_A RRF2 family protein; structural genomics, transcription regulator, P protein structure initiative; 2.50A {Bacillus cereus atcc 14579} SCOP: a.4.5.55
Probab=95.18 E-value=0.018 Score=45.27 Aligned_cols=73 Identities=12% Similarity=0.150 Sum_probs=51.8
Q ss_pred HHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchh
Q 021867 30 MSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKL 109 (306)
Q Consensus 30 ~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~ 109 (306)
.+|++.+.+... . ++++|+.+||+.+++ ++..++++|..|...|+++... | .|.|.+++....
T Consensus 15 yAl~~L~~La~~---~--~~~~~~~~iA~~~~i---~~~~l~kil~~L~~~Glv~s~r--------G-~GGy~L~~~p~~ 77 (149)
T 1ylf_A 15 IAVHILSILKNN---P--SSLCTSDYMAESVNT---NPVVIRKIMSYLKQAGFVYVNR--------G-PGGAGLLKDLHE 77 (149)
T ss_dssp HHHHHHHHHHHS---C--GGGCCHHHHHHHHTS---CHHHHHHHHHHHHHTTSEEEC------------CCEEESSCGGG
T ss_pred HHHHHHHHHHhC---C--CCCcCHHHHHHHHCc---CHHHHHHHHHHHHHCCcEEEcc--------C-CCceEeCCChhh
Confidence 455555555432 2 268999999999999 7899999999999999998775 2 577888775443
Q ss_pred hhcCCCCChHHHHHHh
Q 021867 110 LLKDNPLSVTPFLQAM 125 (306)
Q Consensus 110 l~~~~~~~l~~~~~~~ 125 (306)
+ ++...+...
T Consensus 78 I------tl~dVi~a~ 87 (149)
T 1ylf_A 78 I------TLLDVYHAV 87 (149)
T ss_dssp C------BHHHHHHHH
T ss_pred C------cHHHHHHHH
Confidence 2 355555443
No 356
>3k0l_A Repressor protein; helix-turn-helix, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.35A {Acinetobacter SP}
Probab=95.18 E-value=0.02 Score=45.22 Aligned_cols=67 Identities=9% Similarity=0.137 Sum_probs=50.6
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.|+..|... +++|..+||+.+++ ++..+.++++.|...|++++...... .-.-.+.+|+.++.+.
T Consensus 48 q~~iL~~l~~~-~~~t~~eLa~~l~~---~~~tvs~~l~~Le~~Glv~r~~~~~D----rR~~~l~LT~~G~~~~ 114 (162)
T 3k0l_A 48 QFTALSVLAAK-PNLSNAKLAERSFI---KPQSANKILQDLLANGWIEKAPDPTH----GRRILVTVTPSGLDKL 114 (162)
T ss_dssp HHHHHHHHHHC-TTCCHHHHHHHHTS---CGGGHHHHHHHHHHTTSEEEEECCSS----SCCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHC-CCCCHHHHHHHHCC---CHHHHHHHHHHHHHCcCeEecCCCCc----CCeeEeEECHhHHHHH
Confidence 44567777765 68999999999999 78999999999999999998752110 0012478888887544
No 357
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.17 E-value=0.039 Score=48.43 Aligned_cols=41 Identities=20% Similarity=0.122 Sum_probs=34.8
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES 237 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~ 237 (306)
.....|||++||+|..+..+++. +.+++++|+ +.+++.|++
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~~a~~ 275 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQLAKE 275 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHH
Confidence 35679999999999999998876 458999999 788888775
No 358
>3nrv_A Putative transcriptional regulator (MARR/EMRR FAM; PSI-2, protein structure initiati structural genomics; HET: MSE; 2.00A {Acinetobacter SP}
Probab=95.08 E-value=0.013 Score=45.48 Aligned_cols=68 Identities=12% Similarity=0.184 Sum_probs=48.3
Q ss_pred HHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 36 VELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 36 ~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
.++.++..|... ++.|..+||+.+++ ++..+.++++.|...|++++...... .-...+.+|+.++.+.
T Consensus 41 ~~~~iL~~l~~~-~~~t~~ela~~l~~---~~~tvs~~l~~Le~~Glv~r~~~~~D----~R~~~~~lT~~G~~~~ 108 (148)
T 3nrv_A 41 TEWRIISVLSSA-SDCSVQKISDILGL---DKAAVSRTVKKLEEKKYIEVNGHSED----KRTYAINLTEMGQELY 108 (148)
T ss_dssp HHHHHHHHHHHS-SSBCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEC-------------CCBEECHHHHHHH
T ss_pred HHHHHHHHHHcC-CCCCHHHHHHHHCC---CHHHHHHHHHHHHHCCCEEeecCCCC----cceeEeEECHhHHHHH
Confidence 355567777665 69999999999999 78999999999999999998742100 0023477888776543
No 359
>3t8r_A Staphylococcus aureus CYMR; transcriptional regulator protein, dimer, sulfenic acid, UNK function; 1.70A {Staphylococcus aureus} PDB: 3t8t_A
Probab=95.08 E-value=0.025 Score=44.14 Aligned_cols=49 Identities=14% Similarity=0.273 Sum_probs=41.3
Q ss_pred CCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhch
Q 021867 49 KPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASK 108 (306)
Q Consensus 49 ~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~ 108 (306)
+++|.++||+.+++ ++..++++|..|...|++.... |-.|.|.++....
T Consensus 27 ~~~s~~~IA~~~~i---~~~~l~kil~~L~~aGlv~s~r--------G~~GGy~Lar~p~ 75 (143)
T 3t8r_A 27 GCISLKSIAEENNL---SDLYLEQLVGPLRNAGLIRSVR--------GAKGGYQLRVPAE 75 (143)
T ss_dssp CCEEHHHHHHHTTC---CHHHHHHHHHHHHHTTSEEECS--------SSSSEEEESSCGG
T ss_pred CCcCHHHHHHHHCc---CHHHHHHHHHHHHHCCEEEecC--------CCCCCeeecCCcc
Confidence 58999999999999 7899999999999999998764 2247788876543
No 360
>3s2w_A Transcriptional regulator, MARR family; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 2.45A {Methanosarcina mazei}
Probab=95.05 E-value=0.052 Score=42.54 Aligned_cols=66 Identities=15% Similarity=0.173 Sum_probs=48.4
Q ss_pred hCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 38 LGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 38 lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
+.++..|... ++.|..+||+.+++ ++..+.++++.|...|++++...... .-.-.+.+|+.++.+.
T Consensus 53 ~~vL~~l~~~-~~~t~~eLa~~l~~---~~~tvs~~l~~Le~~Glv~r~~~~~D----rR~~~l~LT~~G~~~~ 118 (159)
T 3s2w_A 53 FPFLMRLYRE-DGINQESLSDYLKI---DKGTTARAIQKLVDEGYVFRQRDEKD----RRSYRVFLTEKGKKLE 118 (159)
T ss_dssp HHHHHHHHHS-CSEEHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEECC-------CCEEEEECHHHHHHH
T ss_pred HHHHHHHHHC-CCCCHHHHHHHHCC---CHHHHHHHHHHHHHCCCEEEecCCCC----CCeeEEEECHHHHHHH
Confidence 3355566654 78999999999999 78999999999999999998752100 0012477888777544
No 361
>2nyx_A Probable transcriptional regulatory protein, RV14; alpha/beta, structural genomics, PSI-2; 2.30A {Mycobacterium tuberculosis}
Probab=95.05 E-value=0.042 Score=43.63 Aligned_cols=67 Identities=16% Similarity=0.257 Sum_probs=50.4
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.|+..|... +++|..+||+.+++ ++..+.++++.|...|++++...... .-.-.+.+|+.+..+.
T Consensus 47 ~~~iL~~L~~~-~~~t~~eLa~~l~i---s~~tvs~~l~~Le~~GlV~r~~~~~D----rR~~~~~LT~~G~~~~ 113 (168)
T 2nyx_A 47 QFRTLVILSNH-GPINLATLATLLGV---QPSATGRMVDRLVGAELIDRLPHPTS----RRELLAALTKRGRDVV 113 (168)
T ss_dssp HHHHHHHHHHH-CSEEHHHHHHHHTS---CHHHHHHHHHHHHHTTSEEEEECSSC----SSCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHhCC---CHHHHHHHHHHHHHCCCEEeccCCCC----CCeeEEEECHHHHHHH
Confidence 45567777654 68999999999999 78999999999999999998652100 0012378888887544
No 362
>3bja_A Transcriptional regulator, MARR family, putative; NP_978771.1, putative MARR-like transcription regulator, MAR structural genomics; 2.38A {Bacillus cereus}
Probab=95.01 E-value=0.013 Score=44.80 Aligned_cols=67 Identities=9% Similarity=0.234 Sum_probs=49.3
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.++..|... ++.|..+||+.+++ ++..+.++++.|...|++.+..... +.-.-.+.+|+.+..+.
T Consensus 35 ~~~iL~~l~~~-~~~~~~ela~~l~~---~~~tvs~~l~~L~~~gli~r~~~~~----d~r~~~~~lT~~G~~~~ 101 (139)
T 3bja_A 35 QFGVIQVLAKS-GKVSMSKLIENMGC---VPSNMTTMIQRMKRDGYVMTEKNPN----DQRETLVYLTKKGEETK 101 (139)
T ss_dssp HHHHHHHHHHS-CSEEHHHHHHHCSS---CCTTHHHHHHHHHHTTSEEEEECSS----CTTCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHc-CCcCHHHHHHHHCC---ChhHHHHHHHHHHHCCCeeeccCCC----CCceeEEEECHHHHHHH
Confidence 45566677654 68999999999999 6789999999999999999864210 00012377888877544
No 363
>2nnn_A Probable transcriptional regulator; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=94.98 E-value=0.012 Score=45.06 Aligned_cols=67 Identities=12% Similarity=0.098 Sum_probs=49.9
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.++..|... ++.|..+||+.+++ ++..+.++++.|...|++++...... .-...|.+|+.+..+.
T Consensus 40 ~~~iL~~l~~~-~~~t~~ela~~l~~---~~~tvs~~l~~L~~~glv~r~~~~~d----~R~~~~~lT~~G~~~~ 106 (140)
T 2nnn_A 40 QWAALVRLGET-GPCPQNQLGRLTAM---DAATIKGVVERLDKRGLIQRSADPDD----GRRLLVSLSPAGRAEL 106 (140)
T ss_dssp HHHHHHHHHHH-SSBCHHHHHHHTTC---CHHHHHHHHHHHHHTTCEEEEEETTE----EEEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCC---CHHHHHHHHHHHHHCCCEEeeCCCCC----CCeeeeEECHhHHHHH
Confidence 55677777654 68999999999999 78999999999999999998642000 0012377888876543
No 364
>2x4h_A Hypothetical protein SSO2273; transcription; 2.30A {Sulfolobus solfataricus}
Probab=94.95 E-value=0.022 Score=43.78 Aligned_cols=49 Identities=18% Similarity=0.326 Sum_probs=43.1
Q ss_pred CCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhh
Q 021867 48 GKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLL 110 (306)
Q Consensus 48 ~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l 110 (306)
+++.|..+||+.+++ ++..+.+.++.|...|++.+.. +.|.+|+.+..+
T Consensus 29 ~~~~s~~ela~~l~i---s~~tv~~~l~~Le~~Gli~r~~-----------~~~~Lt~~g~~~ 77 (139)
T 2x4h_A 29 GEGAKINRIAKDLKI---APSSVFEEVSHLEEKGLVKKKE-----------DGVWITNNGTRS 77 (139)
T ss_dssp TSCBCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEET-----------TEEEECHHHHHH
T ss_pred CCCcCHHHHHHHhCC---ChHHHHHHHHHHHHCCCEEecC-----------CeEEEChhHHHH
Confidence 378999999999999 7899999999999999999873 678899887654
No 365
>1xd7_A YWNA; structural genomics, protein structure initiative, winged HE binding, hypothetical protein, PSI; 2.30A {Bacillus subtilis subsp} SCOP: a.4.5.55
Probab=94.95 E-value=0.028 Score=43.87 Aligned_cols=72 Identities=13% Similarity=0.246 Sum_probs=51.8
Q ss_pred HHHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhch
Q 021867 29 SMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASK 108 (306)
Q Consensus 29 ~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~ 108 (306)
..||++.+.+..- . ++ |.++||+.+++ ++..++++|..|...|++.... | .|.|.++....
T Consensus 9 ~yAl~~L~~La~~----~--~~-s~~~IA~~~~i---~~~~l~kIl~~L~~aGlv~s~r--------G-~GGy~Lar~p~ 69 (145)
T 1xd7_A 9 AVAIHILSLISMD----E--KT-SSEIIADSVNT---NPVVVRRMISLLKKADILTSRA--------G-VPGASLKKDPA 69 (145)
T ss_dssp HHHHHHHHHHHTC----S--CC-CHHHHHHHHTS---CHHHHHHHHHHHHHTTSEECCS--------S-SSSCEESSCGG
T ss_pred HHHHHHHHHHHhC----C--CC-CHHHHHHHHCc---CHHHHHHHHHHHHHCCceEeec--------C-CCCceecCCHH
Confidence 3455555544321 2 35 99999999999 7899999999999999999775 3 67788887554
Q ss_pred hhhcCCCCChHHHHHHh
Q 021867 109 LLLKDNPLSVTPFLQAM 125 (306)
Q Consensus 109 ~l~~~~~~~l~~~~~~~ 125 (306)
.+ ++...+...
T Consensus 70 ~I------tl~dVi~av 80 (145)
T 1xd7_A 70 DI------SLLEVYRAV 80 (145)
T ss_dssp GC------BHHHHHHHH
T ss_pred HC------CHHHHHHHH
Confidence 33 355555443
No 366
>3k69_A Putative transcription regulator; putative transcriptional regulator, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.95A {Lactobacillus plantarum} SCOP: a.4.5.0
Probab=94.95 E-value=0.034 Score=44.38 Aligned_cols=74 Identities=14% Similarity=0.289 Sum_probs=52.7
Q ss_pred HHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchh
Q 021867 30 MSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKL 109 (306)
Q Consensus 30 ~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~ 109 (306)
.||++.+.+..- . +.++|.++||+.+++ ++..++++|..|...|+++... |-.|.|.+.+....
T Consensus 13 yAlr~l~~La~~----~-~~~~s~~~IA~~~~i---s~~~l~kil~~L~~aGlv~s~r--------G~~GGy~Lar~p~~ 76 (162)
T 3k69_A 13 VAVHSILYLDAH----R-DSKVASRELAQSLHL---NPVMIRNILSVLHKHGYLTGTV--------GKNGGYQLDLALAD 76 (162)
T ss_dssp HHHHHHHHHHTT----T-TSCBCHHHHHHHHTS---CGGGTHHHHHHHHHTTSSEEEC--------STTCEEECCSCGGG
T ss_pred HHHHHHHHHHhC----C-CCCcCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEeec--------CCCCCeEecCChhh
Confidence 455555544332 1 368999999999999 7899999999999999998765 22467988875543
Q ss_pred hhcCCCCChHHHHHHh
Q 021867 110 LLKDNPLSVTPFLQAM 125 (306)
Q Consensus 110 l~~~~~~~l~~~~~~~ 125 (306)
+ ++...+...
T Consensus 77 I------tl~dIi~av 86 (162)
T 3k69_A 77 M------NLGDLYDLT 86 (162)
T ss_dssp S------BHHHHHHHH
T ss_pred C------cHHHHHHHH
Confidence 3 355555443
No 367
>3bpv_A Transcriptional regulator; MARR, DNA binding, transcription factor, winged helix motif, DNA-binding; 1.40A {Methanobacterium thermoautotrophicum} PDB: 3bpx_A*
Probab=94.94 E-value=0.015 Score=44.34 Aligned_cols=64 Identities=16% Similarity=0.242 Sum_probs=48.5
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCC---ceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQ---GYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~---~y~~t~~s~~l~ 111 (306)
++.++..|..+ ++.|..+||+.+++ ++..+.++++.|...|++++.... .++ .+.+|+.+..+.
T Consensus 31 ~~~iL~~l~~~-~~~~~~ela~~l~~---s~~tvs~~l~~L~~~glv~~~~~~-------~d~R~~~~~lT~~G~~~~ 97 (138)
T 3bpv_A 31 QVACLLRIHRE-PGIKQDELATFFHV---DKGTIARTLRRLEESGFIEREQDP-------ENRRRYILEVTRRGEEII 97 (138)
T ss_dssp HHHHHHHHHHS-TTCBHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEEET-------TEEEEEEEEECHHHHHTH
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCC---CHHHHHHHHHHHHHCCCEEeecCC-------CCceeEEeeECHhHHHHH
Confidence 44456666654 78999999999999 789999999999999999986420 112 367888776543
No 368
>2fsw_A PG_0823 protein; alpha-beta structure, helix-turn-helix, winged-helix-turn-HE structural genomics, PSI, protein structure initiative; HET: MSE; 2.16A {Porphyromonas gingivalis} SCOP: a.4.5.69
Probab=94.94 E-value=0.017 Score=42.59 Aligned_cols=79 Identities=14% Similarity=0.182 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcccccccCCCCCCHHHHHHhc-CCCCCCcchHHHHHHHHHHcCceeeecccCCCC
Q 021867 15 AQAHVWNHIFNFINSMSLKCAVELGIPDIINKHGKPMTLNELVSAL-TINPSKTRCVYRLMRILIHSGFFAQQTLNSSRN 93 (306)
Q Consensus 15 ~~~~l~~~~~~~~~~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~-g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~ 93 (306)
+...+++++.+.|...+|. .|.. ++.++.||++.+ |+ ++..+.+.|+.|...|++++......
T Consensus 14 ~~~~~l~~l~~~~~~~IL~---------~L~~--~~~~~~eL~~~l~gi---s~~~ls~~L~~Le~~GlV~r~~~~~d-- 77 (107)
T 2fsw_A 14 PVRKSMQIFAGKWTLLIIF---------QINR--RIIRYGELKRAIPGI---SEKMLIDELKFLCGKGLIKKKQYPEV-- 77 (107)
T ss_dssp HHHHHHHHHTSSSHHHHHH---------HHTT--SCEEHHHHHHHSTTC---CHHHHHHHHHHHHHTTSEEEEEECSS--
T ss_pred CHHHHHHHHcCccHHHHHH---------HHHh--CCcCHHHHHHHcccC---CHHHHHHHHHHHHHCCCEEEeecCCC--
Confidence 4555666666666554444 3332 689999999999 59 78999999999999999998753110
Q ss_pred CCCCCCceecChhchhhh
Q 021867 94 NNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 94 ~~~~~~~y~~t~~s~~l~ 111 (306)
.-.-.|.+|+.++.+.
T Consensus 78 --~r~~~y~LT~~G~~l~ 93 (107)
T 2fsw_A 78 --PPRVEYSLTPLGEKVL 93 (107)
T ss_dssp --SCEEEEEECHHHHTTH
T ss_pred --CCeeEEEECccHHHHH
Confidence 0013599999886543
No 369
>3bro_A Transcriptional regulator; helix_TURN_helix, multiple antibiotic resistance protein (MA structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.04A {Oenococcus oeni} SCOP: a.4.5.28
Probab=94.91 E-value=0.021 Score=43.65 Aligned_cols=68 Identities=13% Similarity=0.206 Sum_probs=48.8
Q ss_pred HhCcccccccCCC-CCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGK-PMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~-~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.++..|...++ ++|..+||+.+++ ++..+.++++.|...|++++...... .-...+.+|+.+..+.
T Consensus 36 ~~~iL~~l~~~~~~~~~~~ela~~l~~---~~~tvs~~l~~Le~~Gli~r~~~~~d----~R~~~i~lT~~G~~~~ 104 (141)
T 3bro_A 36 QMTIIDYLSRNKNKEVLQRDLESEFSI---KSSTATVLLQRMEIKKLLYRKVSGKD----SRQKCLKLTKKANKLE 104 (141)
T ss_dssp HHHHHHHHHHTTTSCCBHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEECSSC----TTSEEEEECHHHHTTH
T ss_pred HHHHHHHHHHCCCCCcCHHHHHHHHCC---CcchHHHHHHHHHHCCCEEeeCCCcC----CCeeeeEECHHHHHHH
Confidence 3445666665432 8999999999999 78999999999999999998752100 0012467888776443
No 370
>2lkp_A Transcriptional regulator, ARSR family; symmetric homodimer, NI(II) binding protein, DNA binding Pro transcription regulator; NMR {Mycobacterium tuberculosis}
Probab=94.90 E-value=0.015 Score=43.54 Aligned_cols=49 Identities=18% Similarity=0.345 Sum_probs=41.5
Q ss_pred HHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 34 CAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 34 ~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
...++.|+..|.+ ++.|+.+||+.+|+ ++..+.+.|+.|...|++....
T Consensus 31 ~~~~~~il~~L~~--~~~s~~ela~~l~i---s~stvsr~l~~Le~~Glv~~~~ 79 (119)
T 2lkp_A 31 TPSRLMILTQLRN--GPLPVTDLAEAIGM---EQSAVSHQLRVLRNLGLVVGDR 79 (119)
T ss_dssp CHHHHHHHHHHHH--CCCCHHHHHHHHSS---CHHHHHHHHHHHHHHCSEEEEE
T ss_pred CHHHHHHHHHHHH--CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEEEe
Confidence 3446667777765 58999999999999 7899999999999999998765
No 371
>3eco_A MEPR; mutlidrug efflux pump regulator winged helix-turn-helix motif, DNA-binding, transcription, transcription regulation; 2.40A {Staphylococcus aureus} SCOP: a.4.5.0
Probab=94.85 E-value=0.015 Score=44.46 Aligned_cols=68 Identities=16% Similarity=0.134 Sum_probs=49.8
Q ss_pred HhCcccccccCC-CCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHG-KPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~-~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.++..|..++ ++.|..+||+.+++ ++..+.++++.|...|++++...... .-...+.+|+.++.+.
T Consensus 33 ~~~vL~~l~~~~~~~~t~~ela~~l~~---~~~tvs~~l~~Le~~Gli~r~~~~~D----~R~~~~~LT~~G~~~~ 101 (139)
T 3eco_A 33 QGHTLGYLYAHQQDGLTQNDIAKALQR---TGPTVSNLLRNLERKKLIYRYVDAQD----TRRKNIGLTTSGIKLV 101 (139)
T ss_dssp HHHHHHHHHHSTTTCEEHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEECCC------CCEEEEECHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcCHHHHHHHhCC---CcccHHHHHHHHHHCCCEeecCCCCC----CCeeeeEECHHHHHHH
Confidence 455666666543 58999999999999 78999999999999999998752100 0012467888877544
No 372
>3oop_A LIN2960 protein; protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG, unknown function; 1.78A {Listeria innocua}
Probab=94.84 E-value=0.013 Score=45.07 Aligned_cols=67 Identities=12% Similarity=0.197 Sum_probs=49.7
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.++..|... ++.|..+||+.+++ ++..+.++++.|...|++++..... +.-...+.+|+.+..+.
T Consensus 39 ~~~iL~~l~~~-~~~t~~eLa~~l~~---~~~~vs~~l~~L~~~Glv~r~~~~~----D~R~~~~~LT~~G~~~~ 105 (143)
T 3oop_A 39 QWSVLEGIEAN-EPISQKEIALWTKK---DTPTVNRIVDVLLRKELIVREISTE----DRRISLLSLTDKGRKET 105 (143)
T ss_dssp HHHHHHHHHHH-SSEEHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEC--------CCSCEEEECHHHHHHH
T ss_pred HHHHHHHHHHc-CCcCHHHHHHHHCC---CHhhHHHHHHHHHHCCCeeccCCCc----cCceeeeeECHHHHHHH
Confidence 45566677654 79999999999999 7899999999999999999875210 00123478888877544
No 373
>3boq_A Transcriptional regulator, MARR family; MARR famil structural genomics, PSI-2, protein structure initiative; 2.39A {Silicibacter pomeroyi dss-3}
Probab=94.84 E-value=0.032 Score=43.71 Aligned_cols=68 Identities=15% Similarity=0.218 Sum_probs=48.1
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.++..|...+++.|..+||+.+++ ++..+.++++.|...|++++..... +.-.-.+.+|+.+..+.
T Consensus 49 ~~~iL~~L~~~~~~~~~~ela~~l~i---~~~tvs~~l~~Le~~Gli~r~~~~~----d~R~~~~~lT~~G~~~~ 116 (160)
T 3boq_A 49 KFDAMAQLARNPDGLSMGKLSGALKV---TNGNVSGLVNRLIKDGMVVKAMSAD----DRRSFSAKLTDAGLTTF 116 (160)
T ss_dssp HHHHHHHHHHCTTCEEHHHHHHHCSS---CCSCHHHHHHHHHHHTSEEEC------------CEEEECHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCHHHHHHHHCC---ChhhHHHHHHHHHHCCCEEeecCCC----CCCeEEEEEChhHHHHH
Confidence 45577788322378999999999999 6789999999999999999864200 00012377888776543
No 374
>4aik_A Transcriptional regulator SLYA; transcription, transcription factor; 1.85A {Yersinia pseudotuberculosis} PDB: 4aih_A 4aij_A 3qpt_A* 3q5f_A*
Probab=94.81 E-value=0.026 Score=44.23 Aligned_cols=64 Identities=17% Similarity=0.187 Sum_probs=48.5
Q ss_pred hCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCC---ceecChhchhhh
Q 021867 38 LGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQ---GYVLKNASKLLL 111 (306)
Q Consensus 38 lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~---~y~~t~~s~~l~ 111 (306)
+.++-.|...+++.+..+||+.+++ ++..+.++++.|...|++++.... .++ .+.+|+.++.+.
T Consensus 34 ~~vL~~L~~~~~~~~~~eLa~~l~~---~~~tvs~~v~~Le~~GlV~R~~~~-------~DrR~~~l~LT~~G~~~~ 100 (151)
T 4aik_A 34 WVTLYNINRLPPEQSQIQLAKAIGI---EQPSLVRTLDQLEEKGLITRHTSA-------NDRRAKRIKLTEQSSPII 100 (151)
T ss_dssp HHHHHHHHHSCTTSCHHHHHHHHTS---CHHHHHHHHHHHHHTTSEEEEECS-------SCTTCEEEEECGGGHHHH
T ss_pred HHHHHHHHHcCCCCcHHHHHHHHCc---CHHHHHHHHHHHHhCCCeEeecCC-------CCCcchhhhcCHHHHHHH
Confidence 3445556544567888999999999 789999999999999999987631 122 377888887544
No 375
>3hsr_A HTH-type transcriptional regulator SARZ; helix-turn-helix, cysteine disulfide, MARR-family transcript regulator, DNA-binding; 1.90A {Staphylococcus aureus subsp} PDB: 3hse_A 3hrm_A 4gxo_A
Probab=94.81 E-value=0.095 Score=40.07 Aligned_cols=67 Identities=9% Similarity=0.157 Sum_probs=49.3
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.++..|..+ ++.|..+||+.+++ ++..+.++++.|...|++++...... .-.-.+.+|+.++.+.
T Consensus 38 q~~vL~~l~~~-~~~t~~eLa~~l~~---~~~tvs~~l~~L~~~Glv~r~~~~~D----~R~~~~~LT~~G~~~~ 104 (140)
T 3hsr_A 38 GYIVLMAIEND-EKLNIKKLGERVFL---DSGTLTPLLKKLEKKDYVVRTREEKD----ERNLQISLTEQGKAIK 104 (140)
T ss_dssp HHHHHHHSCTT-CEEEHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEC-----------CEEEECHHHHHTH
T ss_pred HHHHHHHHHHc-CCcCHHHHHHHHCC---ChhhHHHHHHHHHHCCCeEecCCCCC----cceeeeeEChHHHHHH
Confidence 44566677654 79999999999999 78999999999999999998752100 0023478888877544
No 376
>1jgs_A Multiple antibiotic resistance protein MARR; transcription regulation, DNA-binding, repressor, transcription; HET: SAL; 2.30A {Escherichia coli} SCOP: a.4.5.28
Probab=94.80 E-value=0.016 Score=44.19 Aligned_cols=67 Identities=13% Similarity=0.146 Sum_probs=49.2
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.++..|..+ ++.|..+||+.+++ ++..+.++++.|...|++++..... +.-.-.+.+|+.++.+.
T Consensus 36 ~~~iL~~l~~~-~~~~~~~la~~l~~---~~~tvs~~l~~L~~~gli~r~~~~~----d~R~~~~~lT~~G~~~~ 102 (138)
T 1jgs_A 36 QFKVLCSIRCA-ACITPVELKKVLSV---DLGALTRMLDRLVCKGWVERLPNPN----DKRGVLVKLTTGGAAIC 102 (138)
T ss_dssp HHHHHHHHHHH-SSBCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEECTT----CSSCEEEEECHHHHHHH
T ss_pred HHHHHHHHHhc-CCCCHHHHHHHHCC---ChHHHHHHHHHHHHCCCEEecCCcc----cCceeEeEEChhHHHHH
Confidence 44456666653 68999999999999 7899999999999999999875210 00012378888887544
No 377
>3deu_A Transcriptional regulator SLYA; MARR, WING-helix, transcription regulator, activator, DNA-binding, repressor; HET: SAL; 2.30A {Salmonella typhimurium} SCOP: a.4.5.28
Probab=94.80 E-value=0.015 Score=46.30 Aligned_cols=68 Identities=18% Similarity=0.188 Sum_probs=48.9
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.|+..|...++++|..+||+.+++ +...+.++++.|...|++++...... .-...+.+|+.++.+.
T Consensus 55 q~~vL~~L~~~~~~~t~~eLa~~l~i---~~~tvs~~l~~Le~~GlV~r~~~~~D----rR~~~l~LT~~G~~~~ 122 (166)
T 3deu_A 55 HWVTLHNIHQLPPDQSQIQLAKAIGI---EQPSLVRTLDQLEDKGLISRQTCASD----RRAKRIKLTEKAEPLI 122 (166)
T ss_dssp HHHHHHHHHHSCSSEEHHHHHHHHTS---CHHHHHHHHHHHHHTTSEEEC------------CEEEECGGGHHHH
T ss_pred HHHHHHHHHHcCCCCCHHHHHHHHCC---CHhhHHHHHHHHHHCCCEEeeCCCCC----CCeeEEEECHHHHHHH
Confidence 45566677653468999999999999 78999999999999999998752100 0013477888777544
No 378
>2fa5_A Transcriptional regulator MARR/EMRR family; multiple antibiotics resistance repressor, XCC structural genomics, X-RAY diffraction; 1.80A {Xanthomonas campestris}
Probab=94.79 E-value=0.031 Score=43.94 Aligned_cols=67 Identities=16% Similarity=0.226 Sum_probs=47.6
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.|+..|... ++.|..+||+.+++ ++..+.++++.|...|++++..... +.-...|.+|+.+..+.
T Consensus 51 ~~~iL~~l~~~-~~~t~~ela~~l~i---s~~tvs~~l~~Le~~glv~r~~~~~----d~R~~~~~lT~~G~~~~ 117 (162)
T 2fa5_A 51 EWRVITILALY-PGSSASEVSDRTAM---DKVAVSRAVARLLERGFIRRETHGD----DRRRSMLALSPAGRQVY 117 (162)
T ss_dssp HHHHHHHHHHS-TTCCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEC-------------CCCEECHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCHHHHHHHHCC---CHHHHHHHHHHHHHCCCEeeecCCC----CCCeeEEEECHHHHHHH
Confidence 45567777654 68999999999999 7899999999999999999864200 00013477888776543
No 379
>3bj6_A Transcriptional regulator, MARR family; helix-turn-helix, trasnscription regulator, STR genomics, PSI-2, protein structure initiative; 2.01A {Silicibacter pomeroyi dss-3}
Probab=94.76 E-value=0.015 Score=45.17 Aligned_cols=67 Identities=16% Similarity=0.270 Sum_probs=49.5
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.++..|... ++.|..+||+.+++ ++..+.++++.|...|++.+..... +.-.-.+.+|+.+..+.
T Consensus 42 ~~~iL~~l~~~-~~~t~~ela~~l~~---~~~~vs~~l~~Le~~Glv~r~~~~~----d~R~~~~~lT~~G~~~~ 108 (152)
T 3bj6_A 42 QRAILEGLSLT-PGATAPQLGAALQM---KRQYISRILQEVQRAGLIERRTNPE----HARSHRYWLTPRGEAII 108 (152)
T ss_dssp HHHHHHHHHHS-TTEEHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEECCSS----STTSCEEEECHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCHHHHHHHHCC---CHHHHHHHHHHHHHCCCeeecCCcc----cccceeeEEChhhHHHH
Confidence 44466677654 68999999999999 7899999999999999999875210 00122477888776443
No 380
>3e6m_A MARR family transcriptional regulator; APC88769, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; 2.20A {Silicibacter pomeroyi}
Probab=94.72 E-value=0.066 Score=42.09 Aligned_cols=67 Identities=16% Similarity=0.248 Sum_probs=49.7
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.|+..|... ++.|..+||+.+++ ++..+.++++.|...|++++..... |.-...+.+|+.++.+.
T Consensus 55 q~~vL~~l~~~-~~~t~~eLa~~l~~---~~~~vs~~l~~Le~~Glv~r~~~~~----DrR~~~~~LT~~G~~~~ 121 (161)
T 3e6m_A 55 KLRLLSSLSAY-GELTVGQLATLGVM---EQSTTSRTVDQLVDEGLAARSISDA----DQRKRTVVLTRKGKKKL 121 (161)
T ss_dssp HHHHHHHHHHH-SEEEHHHHHHHTTC---CHHHHHHHHHHHHHTTSEEECC-------CCCSCEEEECHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCHHHHHHHHCC---CHHHHHHHHHHHHHCCCEEeeCCcc----cCCeeEeeECHHHHHHH
Confidence 44466677654 68999999999999 7899999999999999999875210 00023478888887544
No 381
>2zkz_A Transcriptional repressor PAGR; protein-DNA, HTH motif, dimer, DN binding, transcription regulation; 2.00A {Bacillus anthracis}
Probab=94.70 E-value=0.0098 Score=43.24 Aligned_cols=51 Identities=14% Similarity=0.281 Sum_probs=39.2
Q ss_pred HHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 32 LKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 32 l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
|..-.++.|+..|... ++.++.|||+.+|+ ++..+++.|+.|... ++....
T Consensus 24 L~~~~Rl~IL~~l~~~-~~~~~~ela~~l~i---s~stvs~hL~~L~~~-lv~~~~ 74 (99)
T 2zkz_A 24 MAHPMRLKIVNELYKH-KALNVTQIIQILKL---PQSTVSQHLCKMRGK-VLKRNR 74 (99)
T ss_dssp HCSHHHHHHHHHHHHH-SCEEHHHHHHHHTC---CHHHHHHHHHHHBTT-TBEEEE
T ss_pred hCCHHHHHHHHHHHHC-CCcCHHHHHHHHCc---CHHHHHHHHHHHHHH-hhhheE
Confidence 3344455566333322 68999999999999 789999999999999 998765
No 382
>2pg4_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, DNA binding protein; HET: MSE CIT; 2.21A {Aeropyrum pernix} SCOP: a.4.5.48
Probab=94.70 E-value=0.015 Score=41.70 Aligned_cols=62 Identities=23% Similarity=0.261 Sum_probs=44.9
Q ss_pred ccccccCCCCCCHHHHHHhcCCCCCCcch-HHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 41 PDIINKHGKPMTLNELVSALTINPSKTRC-VYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 41 fd~L~~~~~~~t~~eLA~~~g~~~~~~~~-l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
+..|...+.+.|..+||+.+++ ++.. +.++++.|...|++.....+ .-...+.+|+.++.+.
T Consensus 21 L~~l~~~~~~~t~~eLa~~l~i---s~~t~vs~~l~~Le~~Glv~~~~~d------rR~~~~~LT~~G~~~~ 83 (95)
T 2pg4_A 21 LLEFEKKGYEPSLAEIVKASGV---SEKTFFMGLKDRLIRAGLVKEETLS------YRVKTLKLTEKGRRLA 83 (95)
T ss_dssp HHHHHHTTCCCCHHHHHHHHCC---CHHHHHTTHHHHHHHTTSEEEEEEE------TTEEEEEECHHHHHHH
T ss_pred HHHHHhcCCCCCHHHHHHHHCC---CchHHHHHHHHHHHHCCCeecCCCC------CCeEEEEECHhHHHHH
Confidence 3344443337999999999999 6788 99999999999999944311 0023477888877544
No 383
>2fbh_A Transcriptional regulator PA3341; MARR, transcription regulator, APC5857, structural genomics, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=94.70 E-value=0.03 Score=43.03 Aligned_cols=67 Identities=15% Similarity=0.200 Sum_probs=48.5
Q ss_pred HhCccccc-ccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDII-NKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L-~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.++..| .. +++.|..+||+.+++ ++..+.++++.|...|++.+..... +.-.-.+.+|+.+..+.
T Consensus 39 ~~~iL~~l~~~-~~~~t~~~la~~l~~---s~~~vs~~l~~L~~~glv~r~~~~~----d~R~~~~~lT~~G~~~~ 106 (146)
T 2fbh_A 39 RWLVLLHLARH-RDSPTQRELAQSVGV---EGPTLARLLDGLESQGLVRRLAVAE----DRRAKHIVLTPKADVLI 106 (146)
T ss_dssp HHHHHHHHHHC-SSCCBHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEECCBT----TBCSCEEEECTTHHHHH
T ss_pred HHHHHHHHHHc-CCCCCHHHHHHHhCC---ChhhHHHHHHHHHHCCCeeecCCCc----ccCeeeeEECHhHHHHH
Confidence 34466677 44 378999999999999 7899999999999999999875210 00012377777766443
No 384
>3jw4_A Transcriptional regulator, MARR/EMRR family; DNA-binding protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Clostridium acetobutylicum} SCOP: a.4.5.0
Probab=94.67 E-value=0.029 Score=43.39 Aligned_cols=68 Identities=7% Similarity=0.147 Sum_probs=42.1
Q ss_pred HhCcccccccCC-CCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHG-KPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~-~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.++..|..++ ++.|..+||+.+++ ++..+.++++.|...|++++...... .-.-.+.+|+.++.+.
T Consensus 43 q~~vL~~l~~~~~~~~t~~eLa~~l~~---~~~~vs~~l~~L~~~Glv~r~~~~~D----rR~~~~~LT~~G~~~~ 111 (148)
T 3jw4_A 43 QGRMIGYIYENQESGIIQKDLAQFFGR---RGASITSMLQGLEKKGYIERRIPENN----ARQKNIYVLPKGAALV 111 (148)
T ss_dssp HHHHHHHHHHHTTTCCCHHHHHHC---------CHHHHHHHHHHTTSBCCC------------CCCCBCHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHCC---ChhHHHHHHHHHHHCCCEEeeCCCCC----chhheeeECHHHHHHH
Confidence 344566666532 68999999999999 67899999999999999998752100 0012467787776544
No 385
>2rdp_A Putative transcriptional regulator MARR; PFAM PF01047, winged-helix binding motif, structural genomics, PSI-2; 2.30A {Geobacillus stearothermophilus}
Probab=94.65 E-value=0.018 Score=44.61 Aligned_cols=67 Identities=10% Similarity=0.128 Sum_probs=49.2
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.++..|... ++.|..+||+.+++ ++..+.++++.|...|++.+..... +.-...+.+|+.+..+.
T Consensus 44 ~~~iL~~l~~~-~~~t~~ela~~l~~---~~~tvs~~l~~Le~~Glv~r~~~~~----d~R~~~~~lT~~G~~~~ 110 (150)
T 2rdp_A 44 QFVALQWLLEE-GDLTVGELSNKMYL---ACSTTTDLVDRMERNGLVARVRDEH----DRRVVRIRLLEKGERII 110 (150)
T ss_dssp HHHHHHHHHHH-CSBCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEECCC-------CEEEEECHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCC---CchhHHHHHHHHHHCCCeeecCCCC----CcceeEeEECHhHHHHH
Confidence 34466677654 68999999999999 7899999999999999999865210 00012377888777544
No 386
>3g3z_A NMB1585, transcriptional regulator, MARR family; transcription factor, structur genomics, oxford protein production facility; 2.10A {Neisseria meningitidis serogroup B}
Probab=94.62 E-value=0.033 Score=42.93 Aligned_cols=67 Identities=10% Similarity=0.100 Sum_probs=50.1
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.++..|... ++.|..+||+.+++ ++..+.++++.|...|++++...... .-...+.+|+.+..+.
T Consensus 33 q~~iL~~l~~~-~~~t~~eLa~~l~~---~~~tvs~~l~~Le~~Glv~r~~~~~D----~R~~~~~LT~~G~~~~ 99 (145)
T 3g3z_A 33 LFAVLYTLATE-GSRTQKHIGEKWSL---PKQTVSGVCKTLAGQGLIEWQEGEQD----RRKRLLSLTETGKAYA 99 (145)
T ss_dssp HHHHHHHHHHH-CSBCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEECCCSSC----GGGSCEEECHHHHHHH
T ss_pred HHHHHHHHHHC-CCCCHHHHHHHHCC---CHHHHHHHHHHHHHCCCEeeccCCCC----CceeeeeEChhHHHHH
Confidence 55567777654 68999999999999 78999999999999999998652100 0013478888877543
No 387
>2hr3_A Probable transcriptional regulator; MCSG, structural genomics, PSI-2, protein structure initiati midwest center for structural genomics; 2.40A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=94.54 E-value=0.035 Score=42.73 Aligned_cols=70 Identities=19% Similarity=0.249 Sum_probs=50.6
Q ss_pred HHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 35 AVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 35 a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
..++.++..|....++.|..+||+.+++ ++..+.++++.|...|++++..... +.-.-.+.+|+.+..+.
T Consensus 35 ~~~~~iL~~l~~~~~~~~~~~la~~l~i---~~~~vs~~l~~Le~~glv~r~~~~~----d~R~~~~~lT~~G~~~~ 104 (147)
T 2hr3_A 35 FSQLVVLGAIDRLGGDVTPSELAAAERM---RSSNLAALLRELERGGLIVRHADPQ----DGRRTRVSLSSEGRRNL 104 (147)
T ss_dssp HHHHHHHHHHHHTTSCBCHHHHHHHTTC---CHHHHHHHHHHHHHTTSEEEEC----------CCEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHhCC---ChhhHHHHHHHHHHCCCEeeCCCCC----CCCceeeEECHHHHHHH
Confidence 3456677777651278999999999999 7899999999999999999874210 00023377888776544
No 388
>2qvo_A Uncharacterized protein AF_1382; PSI, structural genomics, southeast collaboratory for structural genomics; 1.85A {Archaeoglobus fulgidus dsm 4304} PDB: 3o3k_A 3ov8_A
Probab=94.50 E-value=0.037 Score=39.65 Aligned_cols=52 Identities=6% Similarity=0.087 Sum_probs=40.5
Q ss_pred CCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 50 PMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 50 ~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++|..+||+.+++ ++..+.++++.|...|++..... .-...|.+|+.+..+.
T Consensus 30 ~~t~~eLa~~l~i---~~~tvs~~l~~Le~~Glv~~~~d-------~R~~~v~LT~~G~~~~ 81 (95)
T 2qvo_A 30 DVYIQYIASKVNS---PHSYVWLIIKKFEEAKMVECELE-------GRTKIIRLTDKGQKIA 81 (95)
T ss_dssp CEEHHHHHHHSSS---CHHHHHHHHHHHHHTTSEEEEEE-------TTEEEEEECHHHHHHH
T ss_pred CcCHHHHHHHHCc---CHHHHHHHHHHHHHCcCccCCCC-------CCeEEEEEChhHHHHH
Confidence 4999999999999 78999999999999999943321 0012488999887554
No 389
>1lj9_A Transcriptional regulator SLYA; HTH DNA binding protein, structural genomics, PSI, protein structure initiative; 1.60A {Enterococcus faecalis} SCOP: a.4.5.28
Probab=94.48 E-value=0.024 Score=43.58 Aligned_cols=67 Identities=10% Similarity=0.108 Sum_probs=49.0
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.++..|... ++.|..+||+.+++ ++..+.++++.|...|++.+...... .-.-.+.+|+.+..+.
T Consensus 31 ~~~iL~~l~~~-~~~t~~~la~~l~~---s~~~vs~~l~~Le~~gli~r~~~~~d----~R~~~~~lT~~G~~~~ 97 (144)
T 1lj9_A 31 QYLYLVRVCEN-PGIIQEKIAELIKV---DRTTAARAIKRLEEQGFIYRQEDASN----KKIKRIYATEKGKNVY 97 (144)
T ss_dssp HHHHHHHHHHS-TTEEHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEECSSC----TTCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHC-cCcCHHHHHHHHCC---CHhHHHHHHHHHHHCCCEEeecCCCC----CceeeeEEChhHHHHH
Confidence 34456666654 68999999999999 78999999999999999998752100 0012377888776543
No 390
>3cdh_A Transcriptional regulator, MARR family; helix-turn-hleix, structura genomics, PSI-2, protein structure initiative; 2.69A {Silicibacter pomeroyi dss-3}
Probab=94.43 E-value=0.035 Score=43.26 Aligned_cols=67 Identities=10% Similarity=0.159 Sum_probs=49.3
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.++..|... ++.|..+||+.+++ ++..+.++++.|...|++++..... +.-...+.+|+.+..+.
T Consensus 45 ~~~iL~~l~~~-~~~t~~ela~~l~i---~~~tvs~~l~~Le~~Glv~r~~~~~----d~R~~~~~lT~~G~~~~ 111 (155)
T 3cdh_A 45 EWRVLACLVDN-DAMMITRLAKLSLM---EQSRMTRIVDQMDARGLVTRVADAK----DKRRVRVRLTDDGRALA 111 (155)
T ss_dssp HHHHHHHHSSC-SCBCHHHHHHHTTC---CHHHHHHHHHHHHHTTSEEECC----------CCCEEECHHHHHHH
T ss_pred HHHHHHHHHHC-CCcCHHHHHHHHCC---CHHHHHHHHHHHHHCCCEEeccCCC----cCCeeEeEECHHHHHHH
Confidence 45566777654 68999999999999 7899999999999999999864200 00023478888877544
No 391
>3f3x_A Transcriptional regulator, MARR family, putative; DNA binding protein, DNA-binding, transcription regulation; 1.90A {Sulfolobus solfataricus}
Probab=94.40 E-value=0.12 Score=39.61 Aligned_cols=64 Identities=8% Similarity=0.128 Sum_probs=49.8
Q ss_pred HHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCC---ceecChhchhhh
Q 021867 36 VELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQ---GYVLKNASKLLL 111 (306)
Q Consensus 36 ~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~---~y~~t~~s~~l~ 111 (306)
.++.++..|..+ ++ |..+||+.+++ ++..+.++++.|...|++++.... .++ .+.+|+.+..+.
T Consensus 38 ~~~~iL~~l~~~-~~-~~~~la~~l~~---~~~tvs~~l~~Le~~Glv~r~~~~-------~D~R~~~~~LT~~G~~~~ 104 (144)
T 3f3x_A 38 LDFSILKATSEE-PR-SMVYLANRYFV---TQSAITAAVDKLEAKGLVRRIRDS-------KDRRIVIVEITPKGRQVL 104 (144)
T ss_dssp HHHHHHHHHHHS-CE-EHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEEET-------TEEEEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHC-CC-CHHHHHHHHCC---ChhHHHHHHHHHHHCCCEEeccCC-------CCCceEEEEECHHHHHHH
Confidence 355677777764 45 99999999999 789999999999999999987521 111 488888887544
No 392
>2h09_A Transcriptional regulator MNTR; transcription regulator, diphtheria toxin, manganese transport, structural genomics, NPPSFA; 2.10A {Escherichia coli}
Probab=94.39 E-value=0.043 Score=42.98 Aligned_cols=50 Identities=14% Similarity=0.212 Sum_probs=43.2
Q ss_pred CCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 49 KPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 49 ~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.|..+||+.+|+ ++..+++.++.|...|++.... ...+.+|+.+..+.
T Consensus 53 ~~~~~~~la~~l~v---s~~tvs~~l~~Le~~Glv~r~~----------~~~~~lT~~g~~~~ 102 (155)
T 2h09_A 53 GEARQVDMAARLGV---SQPTVAKMLKRLATMGLIEMIP----------WRGVFLTAEGEKLA 102 (155)
T ss_dssp SCCCHHHHHHHHTS---CHHHHHHHHHHHHHTTCEEEET----------TTEEEECHHHHHHH
T ss_pred CCcCHHHHHHHhCc---CHHHHHHHHHHHHHCCCEEEec----------CCceEEChhHHHHH
Confidence 67999999999999 7899999999999999999875 45688888876543
No 393
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=94.39 E-value=0.013 Score=65.63 Aligned_cols=97 Identities=15% Similarity=0.175 Sum_probs=46.8
Q ss_pred CCeEEEecCCccHHHHHHHHHCCC-----CeEEEecc-hHHHHhchhc--CCCeEEEeccCCCC---CC-CccEEEehhh
Q 021867 197 LNSLVDVGGGIGTVAKAIAKAFPN-----LECTDFDL-PHVVNGLESD--LANLKYVGGDMFEA---IP-PADAVLLKWI 264 (306)
Q Consensus 197 ~~~vlDvGgG~G~~~~~l~~~~p~-----~~~~~~Dl-~~~~~~a~~~--~~rv~~~~~d~~~~---~p-~~D~~~~~~v 264 (306)
..+||+||+|+|.....+.+.... .+++..|. +...+.+++. .-.++...-|..++ .+ +||+|+.+++
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~v 1320 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNCA 1320 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEECC
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEccc
Confidence 468999999999877666655432 25677776 4444444421 01122222233232 12 5999999999
Q ss_pred hccCCchHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 265 LHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 265 lh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
||.-++. ...|+++++.|+| ||++++.|.
T Consensus 1321 l~~t~~~--~~~l~~~~~lL~p---~G~l~~~e~ 1349 (2512)
T 2vz8_A 1321 LATLGDP--AVAVGNMAATLKE---GGFLLLHTL 1349 (2512)
T ss_dssp -------------------------CCEEEEEEC
T ss_pred ccccccH--HHHHHHHHHhcCC---CcEEEEEec
Confidence 9965554 4679999999999 899998874
No 394
>3cjn_A Transcriptional regulator, MARR family; silicibacter pomeroy structural genomics, PSI-2, protein structure initiative; 1.95A {Silicibacter pomeroyi dss-3}
Probab=94.35 E-value=0.021 Score=44.90 Aligned_cols=67 Identities=10% Similarity=0.168 Sum_probs=49.9
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.|+..|... ++.|..+||+.+++ ++..+.++++.|...|++++..... +.-...+.+|+.+..+.
T Consensus 54 ~~~iL~~l~~~-~~~t~~ela~~l~i---s~~tvs~~l~~Le~~Gli~r~~~~~----d~R~~~~~lT~~G~~~~ 120 (162)
T 3cjn_A 54 KMRALAILSAK-DGLPIGTLGIFAVV---EQSTLSRALDGLQADGLVRREVDSD----DQRSSRVYLTPAGRAVY 120 (162)
T ss_dssp HHHHHHHHHHS-CSEEHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEEC------CCSSEEEEECHHHHHHH
T ss_pred HHHHHHHHHHC-CCCCHHHHHHHHCC---ChhHHHHHHHHHHHCCCEEecCCCC----CCCeeEEEECHHHHHHH
Confidence 45567777764 68999999999999 7899999999999999999864210 00123477888776543
No 395
>2eth_A Transcriptional regulator, putative, MAR family; MARR family, structural genomics, joint center for structura genomics, JCSG; 2.30A {Thermotoga maritima} SCOP: a.4.5.28
Probab=94.33 E-value=0.027 Score=44.02 Aligned_cols=67 Identities=16% Similarity=0.160 Sum_probs=49.8
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.|+..|... ++.|..+||+.+++ ++..+.++++.|...|++++...... .-.-.+.+|+.++.+.
T Consensus 46 ~~~iL~~l~~~-~~~t~~ela~~l~i---s~~tvs~~l~~Le~~Gli~r~~~~~d----~R~~~~~lT~~G~~~~ 112 (154)
T 2eth_A 46 ELYAFLYVALF-GPKKMKEIAEFLST---TKSNVTNVVDSLEKRGLVVREMDPVD----RRTYRVVLTEKGKEIF 112 (154)
T ss_dssp HHHHHHHHHHH-CCBCHHHHHHHTTS---CHHHHHHHHHHHHHTTSEEEEECTTT----SSCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCC---CHHHHHHHHHHHHHCCCEEeeCCCCC----cceeEEEECHHHHHHH
Confidence 55667777654 58999999999999 78999999999999999998752100 0012377888776543
No 396
>3hrs_A Metalloregulator SCAR; DTXR/MNTR family member, transcription; 2.70A {Streptococcus gordonii} PDB: 3hrt_A 3hru_A
Probab=94.32 E-value=0.062 Score=44.80 Aligned_cols=51 Identities=18% Similarity=0.379 Sum_probs=45.6
Q ss_pred CCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 48 GKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 48 ~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
+++++..+||+.+++ ++..+.+.++.|...|++++.. ...+.+|+.++.+.
T Consensus 18 ~~~~~~~~lA~~l~v---s~~tvs~~l~~Le~~GlV~r~~----------~~~i~LT~~G~~~~ 68 (214)
T 3hrs_A 18 HNKITNKEIAQLMQV---SPPAVTEMMKKLLAEELLIKDK----------KAGYLLTDLGLKLV 68 (214)
T ss_dssp CSCCCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEET----------TTEEEECHHHHHHH
T ss_pred CCCcCHHHHHHHHCC---ChhHHHHHHHHHHHCCCEEEec----------CCCeEECHHHHHHH
Confidence 479999999999999 7899999999999999999986 47799999987544
No 397
>1sfx_A Conserved hypothetical protein AF2008; structural genomics, HTH MOT protein structure initiative, midwest center for structural genomics; 1.55A {Archaeoglobus fulgidus} SCOP: a.4.5.50
Probab=94.31 E-value=0.022 Score=41.38 Aligned_cols=47 Identities=19% Similarity=0.439 Sum_probs=39.5
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
++.|+..|... ++.|+.+||+.+|+ ++..+.+.|+.|...|++....
T Consensus 22 ~~~il~~l~~~-~~~s~~ela~~l~i---s~~tv~~~l~~L~~~glv~~~~ 68 (109)
T 1sfx_A 22 DVRIYSLLLER-GGMRVSEIARELDL---SARFVRDRLKVLLKRGFVRREI 68 (109)
T ss_dssp HHHHHHHHHHH-CCBCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCC---CHHHHHHHHHHHHHCCCEEEEe
Confidence 44455666543 68999999999999 7899999999999999999875
No 398
>2qlz_A Transcription factor PF0095; 2.50A {Pyrococcus furiosus} PDB: 2quf_A
Probab=94.10 E-value=0.012 Score=49.92 Aligned_cols=52 Identities=13% Similarity=0.172 Sum_probs=44.6
Q ss_pred HHHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceee
Q 021867 29 SMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQ 85 (306)
Q Consensus 29 ~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~ 85 (306)
..+|....++.|+..|.. +|.|+.+||+.+|+ ++..+.+.|+.|...|++..
T Consensus 6 lkaL~~~~R~~IL~~L~~--g~~s~~ELa~~lgl---S~stVs~hL~~Le~aGLV~~ 57 (232)
T 2qlz_A 6 FYILGNKVRRDLLSHLTC--MECYFSLLSSKVSV---SSTAVAKHLKIMEREGVLQS 57 (232)
T ss_dssp HHHHTSHHHHHHHHHHTT--TTTCSSSSCTTCCC---CHHHHHHHHHHHHHTTSEEE
T ss_pred HHHhCCHHHHHHHHHHHh--CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEE
Confidence 345555667778888875 79999999999999 78999999999999999998
No 399
>2a61_A Transcriptional regulator TM0710; APC4350, MCSG, midwest center for structural genomics, PSI, protein structure initiative, MARR; 1.80A {Thermotoga maritima} SCOP: a.4.5.28
Probab=94.09 E-value=0.029 Score=43.05 Aligned_cols=67 Identities=16% Similarity=0.197 Sum_probs=49.2
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.++..|... ++.|..+||+.+++ ++..+.++++.|...|++++...... .-...|.+|+.+..+.
T Consensus 35 ~~~iL~~l~~~-~~~~~~~la~~l~~---s~~tvs~~l~~L~~~glv~r~~~~~d----~r~~~~~lT~~G~~~~ 101 (145)
T 2a61_A 35 QFDILQKIYFE-GPKRPGELSVLLGV---AKSTVTGLVKRLEADGYLTRTPDPAD----RRAYFLVITRKGEEVI 101 (145)
T ss_dssp HHHHHHHHHHH-CCBCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEEETTE----EEEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCC---CchhHHHHHHHHHHCCCeeecCCCCC----CceEEEEECHHHHHHH
Confidence 45566677653 68999999999999 78999999999999999998742000 0012477888776544
No 400
>1z91_A Organic hydroperoxide resistance transcriptional; OHRR, MARR family, bacterial transcription factor, DNA bindi protein; 2.50A {Bacillus subtilis} SCOP: a.4.5.28 PDB: 1z9c_A*
Probab=94.06 E-value=0.057 Score=41.50 Aligned_cols=68 Identities=10% Similarity=0.212 Sum_probs=50.4
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhhc
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLLK 112 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~~ 112 (306)
++.++..|... ++.|..+||+.+++ ++..+.++++.|...|++++..... +.-...+.+|+.+..+..
T Consensus 42 ~~~iL~~l~~~-~~~~~~~la~~l~~---~~~tvs~~l~~L~~~glv~r~~~~~----d~R~~~~~LT~~G~~~~~ 109 (147)
T 1z91_A 42 QYLALLLLWEH-ETLTVKKMGEQLYL---DSGTLTPMLKRMEQQGLITRKRSEE----DERSVLISLTEDGALLKE 109 (147)
T ss_dssp HHHHHHHHHHH-SEEEHHHHHHTTTC---CHHHHHHHHHHHHHHTSEECCBCSS----CTTSBEEEECHHHHSGGG
T ss_pred HHHHHHHHHHC-CCCCHHHHHHHHCC---CcCcHHHHHHHHHHCCCEEeccCCC----CCCeeEEEECHhHHHHHH
Confidence 45566666654 58999999999999 7899999999999999999875210 001233778888875553
No 401
>4hbl_A Transcriptional regulator, MARR family; HTH, transcription factor, DNA binding; 2.50A {Staphylococcus epidermidis}
Probab=94.04 E-value=0.084 Score=40.86 Aligned_cols=67 Identities=15% Similarity=0.211 Sum_probs=47.6
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.|+..|..+ ++.|..+||+.+++ ++..+.++++.|...|++++...... .-...+.+|+.+..+.
T Consensus 43 q~~iL~~l~~~-~~~~~~eLa~~l~~---~~~~vs~~l~~L~~~Glv~r~~~~~D----~R~~~~~LT~~G~~~~ 109 (149)
T 4hbl_A 43 QYLVMLTLWEE-NPQTLNSIGRHLDL---SSNTLTPMLKRLEQSGWVKRERQQSD----KRQLIITLTDNGQQQQ 109 (149)
T ss_dssp HHHHHHHHHHS-SSEEHHHHHHHHTC---CHHHHHHHHHHHHHHTSEEC-------------CEEEECSHHHHHH
T ss_pred HHHHHHHHHHC-CCCCHHHHHHHHCC---CHHHHHHHHHHHHHCCCEeeCCCCCC----cceeeeeECHHHHHHH
Confidence 45566777654 79999999999999 78999999999999999998752100 0012477887776543
No 402
>1bja_A Transcription regulatory protein MOTA; activation domain, middle mode transcription, alpha helical structure, transcription regulation; 2.19A {Enterobacteria phage T4} SCOP: a.4.5.9 PDB: 1i1s_A
Probab=94.02 E-value=0.039 Score=39.70 Aligned_cols=60 Identities=15% Similarity=0.215 Sum_probs=48.0
Q ss_pred HhCcccccccCCCCCCHHHHHH-hcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVS-ALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~-~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.|+-.|.+. ++.|+.+||+ ..++ +...+.|-++.|...|+++..+ ++ +.+|+.++.+.
T Consensus 18 QfsiL~~L~~~-~~~t~~~Lae~~l~~---drstvsrnl~~L~r~GlVe~~~----------~D-l~LT~~G~~~l 78 (95)
T 1bja_A 18 TATILITIAKK-DFITAAEVREVHPDL---GNAVVNSNIGVLIKKGLVEKSG----------DG-LIITGEAQDII 78 (95)
T ss_dssp HHHHHHHHHHS-TTBCHHHHHHTCTTS---CHHHHHHHHHHHHTTTSEEEET----------TE-EEECHHHHHHH
T ss_pred HHHHHHHHHHC-CCCCHHHHHHHHhcc---cHHHHHHHHHHHHHCCCeecCC----------CC-eeeCHhHHHHH
Confidence 34455667665 5999999999 9999 7889999999999999999332 33 88999887544
No 403
>2obp_A Putative DNA-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.70A {Ralstonia eutropha} SCOP: a.4.5.71
Probab=94.00 E-value=0.096 Score=37.79 Aligned_cols=54 Identities=15% Similarity=0.206 Sum_probs=43.6
Q ss_pred CCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhh
Q 021867 48 GKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLL 110 (306)
Q Consensus 48 ~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l 110 (306)
+++.+..+||+.+++ +...+.|+|..|...|+++.... +++.+...+|+.++.+
T Consensus 34 g~~~s~~eLa~~l~l---~~stLsR~l~rLe~~GLV~r~~~------~D~R~~v~LT~~G~~~ 87 (96)
T 2obp_A 34 ATPWSLPKIAKRAQL---PMSVLRRVLTQLQAAGLADVSVE------ADGRGHASLTQEGAAL 87 (96)
T ss_dssp CCCCBHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEEC------TTSCEEEEECHHHHHH
T ss_pred CCCcCHHHHHHHhCC---chhhHHHHHHHHHHCCCEEeecC------CCCceeEEECHHHHHH
Confidence 378999999999999 78999999999999999998652 1223456788877644
No 404
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.97 E-value=0.54 Score=46.15 Aligned_cols=102 Identities=12% Similarity=0.130 Sum_probs=79.5
Q ss_pred CCCeEEEecCCccHHHHHHHHHCC--------CCeEEEecchHHHHhchh-----------c------------------
Q 021867 196 GLNSLVDVGGGIGTVAKAIAKAFP--------NLECTDFDLPHVVNGLES-----------D------------------ 238 (306)
Q Consensus 196 ~~~~vlDvGgG~G~~~~~l~~~~p--------~~~~~~~Dl~~~~~~a~~-----------~------------------ 238 (306)
+...||-+|||-=.....|...+| +++++=+|.|++++.=++ .
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFLT 186 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCEE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHHHHHHHHcChHHHHhhcccccccccccccccccc
Confidence 467899999999999999988766 678888888988765222 0
Q ss_pred CCCeEEEeccCCCC-------------CCC-ccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEeeecCC
Q 021867 239 LANLKYVGGDMFEA-------------IPP-ADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDMIREN 302 (306)
Q Consensus 239 ~~rv~~~~~d~~~~-------------~p~-~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~~~~~ 302 (306)
.++..+++.|+.+. .++ .-++++--+|.+++.+++.++|+.+.+ + | ++.+++.|.+.|.
T Consensus 187 s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~-~-~---~~~~~~~e~~~~~ 259 (695)
T 2zwa_A 187 TPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSK-M-E---NSHFIILEQLIPK 259 (695)
T ss_dssp CSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHT-S-S---SEEEEEEEECCTT
T ss_pred CCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhh-C-C---CceEEEEEeecCC
Confidence 14899999999872 122 346777888899999999999999985 5 5 5899999988774
No 405
>1q1h_A TFE, transcription factor E, TFE; TFIIE, transcription initiation, preinitiation complex, RNA polymerase II, transcription bubble; 2.90A {Sulfolobus solfataricus} SCOP: a.4.5.41
Probab=93.93 E-value=0.022 Score=42.02 Aligned_cols=46 Identities=26% Similarity=0.427 Sum_probs=37.6
Q ss_pred hCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeee
Q 021867 38 LGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQ 86 (306)
Q Consensus 38 lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~ 86 (306)
+.|+..|...|.++|..+||+.+|+ +...+++.|+.|...|++...
T Consensus 21 l~Il~~l~~~g~~~s~~eLa~~lgv---s~~tV~~~L~~L~~~GlV~~~ 66 (110)
T 1q1h_A 21 IDVLRILLDKGTEMTDEEIANQLNI---KVNDVRKKLNLLEEQGFVSYR 66 (110)
T ss_dssp HHHHHHHHHHCSCBCHHHHHHTTTS---CHHHHHHHHHHHHHHTSCEEE
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEEE
Confidence 3455555322347999999999999 789999999999999999876
No 406
>2pex_A Transcriptional regulator OHRR; transcription regulator; 1.90A {Xanthomonas campestris} PDB: 2pfb_A
Probab=93.86 E-value=0.039 Score=42.92 Aligned_cols=68 Identities=12% Similarity=0.179 Sum_probs=49.6
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhhc
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLLK 112 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~~ 112 (306)
++.|+..|... ++.|..+||+.+++ +...+.++++.|...|++++...... .-.-.+.+|+.++.+..
T Consensus 49 ~~~iL~~l~~~-~~~t~~ela~~l~~---s~~tvs~~l~~Le~~glv~r~~~~~d----~R~~~~~lT~~G~~~~~ 116 (153)
T 2pex_A 49 QYLVMLVLWET-DERSVSEIGERLYL---DSATLTPLLKRLQAAGLVTRTRAASD----ERQVIIALTETGRALRS 116 (153)
T ss_dssp HHHHHHHHHHS-CSEEHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEC-----------CEEEECHHHHHGGG
T ss_pred HHHHHHHHHhC-CCcCHHHHHHHhCC---CcccHHHHHHHHHHCCCEeecCCccc----CCeeEeeECHHHHHHHH
Confidence 44566677654 68999999999999 78999999999999999998742100 00124778888875543
No 407
>3tgn_A ADC operon repressor ADCR; helix-turn-helix, transcriptional regulator, transcription; 2.00A {Streptococcus pneumoniae}
Probab=93.83 E-value=0.05 Score=41.79 Aligned_cols=67 Identities=15% Similarity=0.259 Sum_probs=46.3
Q ss_pred HHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 36 VELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 36 ~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
.++.|+..|... + .|..+||+.+++ ++..+.++++.|...|++++..... +.-...+.+|+.+..+.
T Consensus 39 ~~~~iL~~l~~~-~-~t~~eLa~~l~~---s~~tvs~~l~~L~~~Glv~r~~~~~----d~R~~~~~lT~~g~~~~ 105 (146)
T 3tgn_A 39 TQEHILMLLSEE-S-LTNSELARRLNV---SQAAVTKAIKSLVKEGMLETSKDSK----DARVIFYQLTDLARPIA 105 (146)
T ss_dssp HHHHHHHHHTTC-C-CCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEC--------------CCEECGGGHHHH
T ss_pred HHHHHHHHHHhC-C-CCHHHHHHHHCC---CHHHHHHHHHHHHHCCCeEeccCCC----CCceeEEEECHhHHHHH
Confidence 355566677663 4 999999999999 7899999999999999999865210 00123477777776443
No 408
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=93.81 E-value=0.1 Score=45.48 Aligned_cols=91 Identities=14% Similarity=0.124 Sum_probs=61.3
Q ss_pred hcCCCeEEEecC------CccHHHHHHHHHCCC-CeEEEecchHHHHhchhcCCCeEEEeccCCC-CC-CCccEEEehhh
Q 021867 194 FEGLNSLVDVGG------GIGTVAKAIAKAFPN-LECTDFDLPHVVNGLESDLANLKYVGGDMFE-AI-PPADAVLLKWI 264 (306)
Q Consensus 194 ~~~~~~vlDvGg------G~G~~~~~l~~~~p~-~~~~~~Dl~~~~~~a~~~~~rv~~~~~d~~~-~~-p~~D~~~~~~v 264 (306)
.+-..+|||+|+ ..|. ..+.+..|. ..++..|+.++...+ + .++.||+.+ .. ..+|+|+.-..
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~sda----~--~~IqGD~~~~~~~~k~DLVISDMA 178 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVSDA----D--STLIGDCATVHTANKWDLIISDMY 178 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBCSS----S--EEEESCGGGEEESSCEEEEEECCC
T ss_pred ecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCcccccCC----C--eEEEccccccccCCCCCEEEecCC
Confidence 356789999996 6677 355667886 689999985543222 1 458899766 22 35899987543
Q ss_pred h-------ccC--CchHHHHHHHHHHHhcCCCCCCcEEEE
Q 021867 265 L-------HDW--NDEECVKILKKCKEAVTSDDKKGKVII 295 (306)
Q Consensus 265 l-------h~~--~d~~~~~iL~~~~~~L~p~~~gg~lli 295 (306)
- ++- ...-+..+|.=+.+.|+| ||.+++
T Consensus 179 PNtTG~~D~d~~Rs~~L~ElALdfA~~~Lkp---GGsFvV 215 (344)
T 3r24_A 179 DPRTKHVTKENDSKEGFFTYLCGFIKQKLAL---GGSIAV 215 (344)
T ss_dssp CTTSCSSCSCCCCCCTHHHHHHHHHHHHEEE---EEEEEE
T ss_pred CCcCCccccchhHHHHHHHHHHHHHHHhCcC---CCEEEE
Confidence 2 111 222456677888899999 888876
No 409
>2bv6_A MGRA, HTH-type transcriptional regulator MGRA; multidrug resistance regulator, virulence determinant, transcriptional factors; 2.8A {Staphylococcus aureus} SCOP: a.4.5.28
Probab=93.81 E-value=0.035 Score=42.50 Aligned_cols=67 Identities=15% Similarity=0.256 Sum_probs=49.2
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.++..|... ++.|..+||+.+++ ++..+.++++.|...|++++..... +.-.-.+.+|+.+..+.
T Consensus 39 ~~~iL~~l~~~-~~~~~~ela~~l~~---~~~tvs~~l~~L~~~gli~r~~~~~----d~R~~~~~lT~~G~~~~ 105 (142)
T 2bv6_A 39 QFLVLTILWDE-SPVNVKKVVTELAL---DTGTVSPLLKRMEQVDLIKRERSEV----DQREVFIHLTDKSETIR 105 (142)
T ss_dssp HHHHHHHHHHS-SEEEHHHHHHHTTC---CTTTHHHHHHHHHHTTSEEEEECSS----STTCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHc-CCcCHHHHHHHHCC---ChhhHHHHHHHHHHCCCEEeecCCC----CcceEEEEEChHHHHHH
Confidence 45566677654 68999999999999 6789999999999999999875210 00012467788776443
No 410
>2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A*
Probab=93.78 E-value=0.066 Score=41.74 Aligned_cols=50 Identities=20% Similarity=0.294 Sum_probs=41.9
Q ss_pred HHHhCcccccccCCCCCCHHHHHHhc-----CCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 35 AVELGIPDIINKHGKPMTLNELVSAL-----TINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 35 a~~lglfd~L~~~~~~~t~~eLA~~~-----g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
.-+.-|++.|...+++.|++||.+.+ ++ +...++|.|+.|...|++.+..
T Consensus 22 ~qR~~Il~~L~~~~~~~sa~ei~~~l~~~~~~i---s~aTVYR~L~~L~e~Glv~~~~ 76 (145)
T 2fe3_A 22 PQRHAILEYLVNSMAHPTADDIYKALEGKFPNM---SVATVYNNLRVFRESGLVKELT 76 (145)
T ss_dssp HHHHHHHHHHHHCSSCCCHHHHHHHHGGGCTTC---CHHHHHHHHHHHHHTTSEEEEC
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCC---ChhhHHHHHHHHHHCCCEEEEe
Confidence 34555788886555799999999999 56 6789999999999999999886
No 411
>3u2r_A Regulatory protein MARR; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, helix-turn-helix; 2.20A {Planctomyces limnophilus}
Probab=93.72 E-value=0.089 Score=41.62 Aligned_cols=65 Identities=17% Similarity=0.207 Sum_probs=47.2
Q ss_pred HhCcccccccC-CCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCC---ceecChhchhhh
Q 021867 37 ELGIPDIINKH-GKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQ---GYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~-~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~---~y~~t~~s~~l~ 111 (306)
++.|+..|... ++++|..+||+.+++ ++..+.++++.|...|++++... ..++ .+.+|+.++.+.
T Consensus 48 q~~vL~~l~~~~~~~~t~~eLa~~l~~---~~~tvs~~l~~Le~~Glv~r~~~-------~~DrR~~~l~LT~~G~~~~ 116 (168)
T 3u2r_A 48 QYNTLRLLRSVHPEGMATLQIADRLIS---RAPDITRLIDRLDDRGLVLRTRK-------PENRRVVEVALTDAGLKLL 116 (168)
T ss_dssp HHHHHHHHHHHTTSCEEHHHHHHHC------CTHHHHHHHHHHHTTSEEEEEE-------TTEEEEEEEEECHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcCHHHHHHHHCC---ChhhHHHHHHHHHHCCCEeecCC-------CCCCCeeEeEECHHHHHHH
Confidence 45566677654 269999999999999 67899999999999999998752 1122 477888877544
No 412
>2frh_A SARA, staphylococcal accessory regulator A; winged-helix protein, divalent metal binding, transcription; 2.50A {Staphylococcus aureus} SCOP: a.4.5.28 PDB: 2fnp_A 1fzp_D
Probab=93.53 E-value=0.06 Score=40.73 Aligned_cols=68 Identities=15% Similarity=0.308 Sum_probs=48.7
Q ss_pred HhCcccccccC-CCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKH-GKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~-~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.++..|... +++.|..+||+.+++ ++..+.++++.|...|++++..... |.-.-.+.+|+.++.+.
T Consensus 39 q~~vL~~l~~~~~~~~t~~eLa~~l~~---~~~tvs~~l~~Le~~Glv~r~~~~~----D~R~~~i~LT~~G~~~~ 107 (127)
T 2frh_A 39 EFAVLTYISENKEKEYYLKDIINHLNY---KQPQVVKAVKILSQEDYFDKKRNEH----DERTVLILVNAQQRKKI 107 (127)
T ss_dssp HHHHHHHHHHTCCSEEEHHHHHHHSSS---HHHHHHHHHHHHHHTTSSCCBCCSS----SSCCCEEECCSHHHHHH
T ss_pred HHHHHHHHHhccCCCcCHHHHHHHHCC---CHHHHHHHHHHHHHCCCEEecCCCC----CCCeeEEEECHHHHHHH
Confidence 34455555543 268999999999999 7899999999999999999864211 00123477888877544
No 413
>2o03_A Probable zinc uptake regulation protein FURB; DNA-binding, helix-turn-helix, zinc binding, GE regulation; 2.70A {Mycobacterium tuberculosis}
Probab=93.51 E-value=0.04 Score=42.16 Aligned_cols=51 Identities=20% Similarity=0.272 Sum_probs=42.9
Q ss_pred HHHHhCcccccccCCCCCCHHHHHHhc-----CCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 34 CAVELGIPDIINKHGKPMTLNELVSAL-----TINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 34 ~a~~lglfd~L~~~~~~~t~~eLA~~~-----g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
+.-+.-|++.|...+++.|++||.+.+ ++ +...++|.|+.|+..|++.+..
T Consensus 10 T~qR~~Il~~l~~~~~~~sa~ei~~~l~~~~~~i---s~~TVYR~L~~L~e~Glv~~~~ 65 (131)
T 2o03_A 10 TRQRAAISTLLETLDDFRSAQELHDELRRRGENI---GLTTVYRTLQSMASSGLVDTLH 65 (131)
T ss_dssp HHHHHHHHHHHHHCCSCEEHHHHHHHHHHTTCCC---CHHHHHHHHHHHHTTTSEEEEE
T ss_pred CHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCC---CHhhHHHHHHHHHHCCCEEEEE
Confidence 445666777776555799999999999 66 6789999999999999999876
No 414
>2fbi_A Probable transcriptional regulator; MARR, APC5816, structural genomic protein structure initiative; 2.10A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=93.48 E-value=0.034 Score=42.44 Aligned_cols=67 Identities=10% Similarity=0.103 Sum_probs=49.1
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.++..|... ++.|..+||+.+++ ++..+.++++.|...|++++...... .-...+.+|+.+..+.
T Consensus 38 ~~~iL~~l~~~-~~~t~~ela~~l~~---s~~~vs~~l~~Le~~glv~r~~~~~d----~R~~~~~lT~~G~~~~ 104 (142)
T 2fbi_A 38 QWRVIRILRQQ-GEMESYQLANQACI---LRPSMTGVLARLERDGIVRRWKAPKD----QRRVYVNLTEKGQQCF 104 (142)
T ss_dssp HHHHHHHHHHH-CSEEHHHHHHHTTC---CHHHHHHHHHHHHHTTSEEEEEETTE----EEEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCC---CHhHHHHHHHHHHHCCCEEeecCCCC----CCeeEEEECHHHHHHH
Confidence 45566677654 68999999999999 78999999999999999998742000 0012377888776543
No 415
>1uly_A Hypothetical protein PH1932; helix-turn-helix, structural genomics, DNA binding protein; 2.50A {Pyrococcus horikoshii} SCOP: a.4.5.58 PDB: 2cwe_A
Probab=93.46 E-value=0.065 Score=43.93 Aligned_cols=52 Identities=17% Similarity=0.276 Sum_probs=44.4
Q ss_pred HHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeee
Q 021867 30 MSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQ 86 (306)
Q Consensus 30 ~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~ 86 (306)
.++....+..|+..|.+ ++.|..+||+.+|+ ++..+.+.++.|...|++...
T Consensus 15 k~l~d~~~~~IL~~L~~--~~~s~~eLA~~lgl---S~stv~~~l~~Le~~GlI~~~ 66 (192)
T 1uly_A 15 KVMLEDTRRKILKLLRN--KEMTISQLSEILGK---TPQTIYHHIEKLKEAGLVEVK 66 (192)
T ss_dssp HHHHSHHHHHHHHHHTT--CCBCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEE
T ss_pred HHhCCHHHHHHHHHHHc--CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEEE
Confidence 34445567778888874 79999999999999 789999999999999999987
No 416
>2p4w_A Transcriptional regulatory protein ARSR family; archaea, PHR, heat shock, transcriptional regulation, winged DNA binding; 2.60A {Pyrococcus furiosus} SCOP: a.4.5.64
Probab=93.33 E-value=0.045 Score=45.29 Aligned_cols=53 Identities=23% Similarity=0.337 Sum_probs=44.1
Q ss_pred HHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 30 MSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 30 ~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
.+|....++.|+..|.. +|.|+.+||+.+|+ ++..+++.|+.|...|++....
T Consensus 10 kaL~~~~rl~IL~~L~~--~~~s~~eLa~~l~i---s~stvs~hLk~Le~~GLV~~~~ 62 (202)
T 2p4w_A 10 DVLGNETRRRILFLLTK--RPYFVSELSRELGV---GQKAVLEHLRILEEAGLIESRV 62 (202)
T ss_dssp HHHHSHHHHHHHHHHHH--SCEEHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHhCCHHHHHHHHHHHh--CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCceEEEe
Confidence 44555556666667754 79999999999999 7899999999999999999865
No 417
>1p6r_A Penicillinase repressor; transcription regulation, DNA-binding, winged helix protein, bacterial resistance to antibiotics; NMR {Bacillus licheniformis} SCOP: a.4.5.39 PDB: 2p7c_B
Probab=93.27 E-value=0.041 Score=38.18 Aligned_cols=50 Identities=22% Similarity=0.388 Sum_probs=39.1
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCC-CCcchHHHHHHHHHHcCceeeec
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINP-SKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~-~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
+..|++.|... ++.|+.||++.++..+ .++..+.++|+.|...|++.+..
T Consensus 11 e~~vL~~L~~~-~~~t~~ei~~~l~~~~~~s~~Tv~~~l~rL~~kGlv~r~~ 61 (82)
T 1p6r_A 11 ELEVMKVIWKH-SSINTNEVIKELSKTSTWSPKTIQTMLLRLIKKGALNHHK 61 (82)
T ss_dssp HHHHHHHHHTS-SSEEHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHcC-CCCCHHHHHHHHhhcCCccHHHHHHHHHHHHHCCCeEEEe
Confidence 44556666653 6899999999997310 05789999999999999999886
No 418
>3u1d_A Uncharacterized protein; GNTR-superfamily, structural genomics, PSI-biology, midwest for structural genomics, MCSG; 1.80A {Halomicrobium mukohataei}
Probab=93.10 E-value=0.69 Score=36.15 Aligned_cols=71 Identities=11% Similarity=0.116 Sum_probs=47.3
Q ss_pred HhCcccccccCC-CCCCHHHHHHhcC-CCCCCcchHHHHHHHHHHcCceeeecccC-CCCCCCCCCceecChhchhh
Q 021867 37 ELGIPDIINKHG-KPMTLNELVSALT-INPSKTRCVYRLMRILIHSGFFAQQTLNS-SRNNNDEEQGYVLKNASKLL 110 (306)
Q Consensus 37 ~lglfd~L~~~~-~~~t~~eLA~~~g-~~~~~~~~l~rlLr~L~~~g~l~~~~~~~-~~~~~~~~~~y~~t~~s~~l 110 (306)
++.|+..|-.+. +..|+++|++.++ + +...++|.|+.|+..|++++..... .+..+.-...|.+|+.+..+
T Consensus 31 R~~IL~~Ll~~p~~~~ta~eL~~~l~~l---S~aTVyrhL~~L~eaGLV~~~~~~~~~~~rGrP~k~Y~LT~~Gr~~ 104 (151)
T 3u1d_A 31 RLDVLHQILAQPDGVLSVEELLYRNPDE---TEANLRYHVDELVDRGIVEKIPVPRAKSVDDPPTTFYAVTGEGIAL 104 (151)
T ss_dssp HHHHHHHHHHSTTSCBCHHHHHHHCTTS---CHHHHHHHHHHHHHTTSEEEEECCCCTTSSSCCCEEEEECHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCHHHHHHhcCCC---CHHHHHHHHHHHHHCCCeEEeecCcCcccCCCCceEEEECHHHHHH
Confidence 344444443321 4689999999998 8 7899999999999999999764210 00000001269999988743
No 419
>2pn6_A ST1022, 150AA long hypothetical transcriptional regulator; LRP/ASNC family Gln binding, structural genomics, NPPSFA; HET: GLN; 1.44A {Sulfolobus tokodaii} PDB: 2efn_A* 2e7x_A* 2e7w_A* 2yx4_A* 2efq_A* 2pmh_A* 2yx7_A* 2efp_A* 2efo_A*
Probab=93.07 E-value=0.055 Score=42.20 Aligned_cols=46 Identities=17% Similarity=0.279 Sum_probs=40.3
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeee
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQ 86 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~ 86 (306)
+..|+..|..+ ++.|..+||+.+|+ ++..+.+.++.|...|++...
T Consensus 5 ~~~il~~L~~~-~~~~~~ela~~lg~---s~~tv~~~l~~L~~~G~i~~~ 50 (150)
T 2pn6_A 5 DLRILKILQYN-AKYSLDEIAREIRI---PKATLSYRIKKLEKDGVIKGY 50 (150)
T ss_dssp HHHHHHHHTTC-TTSCHHHHHHHHTS---CHHHHHHHHHHHHHTTSSCCC
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCcEEEE
Confidence 55677788764 68999999999999 789999999999999999875
No 420
>3nqo_A MARR-family transcriptional regulator; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PG4; 2.20A {Clostridium difficile}
Probab=92.87 E-value=0.058 Score=43.85 Aligned_cols=71 Identities=13% Similarity=0.108 Sum_probs=52.4
Q ss_pred HHHhCcccccccC-CCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhhc
Q 021867 35 AVELGIPDIINKH-GKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLLK 112 (306)
Q Consensus 35 a~~lglfd~L~~~-~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~~ 112 (306)
..++.++..|... ++++|..+||+.+++ ++..+.++++.|...|++++...... .-.-.+.+|+.+..+..
T Consensus 41 ~~q~~vL~~L~~~~~~~~t~~eLa~~l~i---s~~tvs~~l~~Le~~GlV~r~~~~~D----rR~~~l~LT~~G~~~~~ 112 (189)
T 3nqo_A 41 SRQYMTILSILHLPEEETTLNNIARKMGT---SKQNINRLVANLEKNGYVDVIPSPHD----KRAINVKVTDLGKKVMV 112 (189)
T ss_dssp HHHHHHHHHHHHSCGGGCCHHHHHHHHTS---CHHHHHHHHHHHHHTTSEEEEECSSC----SSCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcCHHHHHHHHCC---CHHHHHHHHHHHHHCCCEEeccCCCC----CCeeEEEECHHHHHHHH
Confidence 3456667777642 268999999999999 78999999999999999998752110 00134789998875543
No 421
>2w25_A Probable transcriptional regulatory protein; transcription regulation, mutant, RV3291C, Glu104Ala, DNA-binding; 2.15A {Mycobacterium tuberculosis} PDB: 2vbw_A* 2vbx_A* 2vby_A* 2vbz_A* 2vc0_A 2vc1_A 2w24_A 2ivm_A 2w29_A 2qz8_A
Probab=92.83 E-value=0.07 Score=41.61 Aligned_cols=47 Identities=17% Similarity=0.145 Sum_probs=39.9
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
+..|+..|..+ ++.|..+||+.+|+ ++..+.+.++.|...|++.+..
T Consensus 9 ~~~iL~~L~~~-~~~s~~ela~~lg~---s~~tv~~~l~~L~~~G~i~~~~ 55 (150)
T 2w25_A 9 DRILVRELAAD-GRATLSELATRAGL---SVSAVQSRVRRLESRGVVQGYS 55 (150)
T ss_dssp HHHHHHHHHHC-TTCCHHHHHHHHTS---CHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEEEE
Confidence 44566677654 78999999999999 7899999999999999998653
No 422
>2fbk_A Transcriptional regulator, MARR family; winged-helix-turn-helix; 2.30A {Deinococcus radiodurans} SCOP: a.4.5.28
Probab=92.77 E-value=0.027 Score=45.35 Aligned_cols=68 Identities=12% Similarity=0.172 Sum_probs=48.1
Q ss_pred HhCcccccccCCCC--CCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKP--MTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~--~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.|+..|...++| +|..+||+.+++ ++..+.++++.|...|++++...... .-.-.+.+|+.++.+.
T Consensus 71 ~~~iL~~L~~~~~~~~~t~~eLa~~l~i---s~~tvs~~l~~Le~~GlV~r~~~~~D----rR~~~~~LT~~G~~~~ 140 (181)
T 2fbk_A 71 GWDLLLTLYRSAPPEGLRPTELSALAAI---SGPSTSNRIVRLLEKGLIERREDERD----RRSASIRLTPQGRALV 140 (181)
T ss_dssp HHHHHHHHHHHCCSSCBCHHHHHHHCSC---CSGGGSSHHHHHHHHTSEECCC-----------CCBEECHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHCC---CHHHHHHHHHHHHHCcCEEecCCCCC----CCeeEEEECHHHHHHH
Confidence 45567777654333 999999999999 67899999999999999998742000 0012477888776544
No 423
>2cfx_A HTH-type transcriptional regulator LRPC; transcriptional regulation, DNA binding, FFRP; 2.4A {Bacillus subtilis} SCOP: a.4.5.32 d.58.4.2
Probab=92.74 E-value=0.071 Score=41.32 Aligned_cols=46 Identities=22% Similarity=0.311 Sum_probs=39.7
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeee
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQ 86 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~ 86 (306)
+..|++.|..+ ++.|..|||+.+|+ ++..+.+.++.|...|++.+.
T Consensus 7 d~~il~~L~~~-~~~s~~ela~~lg~---s~~tv~~~l~~L~~~G~i~~~ 52 (144)
T 2cfx_A 7 DLNIIEELKKD-SRLSMRELGRKIKL---SPPSVTERVRQLESFGIIKQY 52 (144)
T ss_dssp HHHHHHHHHHC-SCCCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCeEEE
Confidence 44567777664 78999999999999 789999999999999999875
No 424
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=92.59 E-value=0.11 Score=40.07 Aligned_cols=51 Identities=16% Similarity=0.192 Sum_probs=42.3
Q ss_pred HHHHhCcccccccCCCCCCHHHHHHhc-----CCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 34 CAVELGIPDIINKHGKPMTLNELVSAL-----TINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 34 ~a~~lglfd~L~~~~~~~t~~eLA~~~-----g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
+.-+.-|++.|...+++.|++||.+.+ ++ +...++|.|+.|+..|++.+..
T Consensus 13 T~qR~~Il~~L~~~~~h~sa~eI~~~l~~~~~~i---s~aTVYR~L~~L~e~Glv~~~~ 68 (139)
T 3mwm_A 13 TRQRAAVSAALQEVEEFRSAQELHDMLKHKGDAV---GLTTVYRTLQSLADAGEVDVLR 68 (139)
T ss_dssp HHHHHHHHHHHTTCSSCEEHHHHHHHHHHTTCCC---CHHHHHHHHHHHHHTTSSEEEE
T ss_pred CHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCC---CHHHHHHHHHHHHHCCCEEEEE
Confidence 345666788887655799999999998 45 6789999999999999999875
No 425
>1ku9_A Hypothetical protein MJ223; putative transcription factor, homodimeric winged-helix fold, structural genomics, PSI; 2.80A {Methanocaldococcus jannaschii} SCOP: a.4.5.36
Probab=92.50 E-value=0.29 Score=37.40 Aligned_cols=45 Identities=22% Similarity=0.341 Sum_probs=37.0
Q ss_pred cccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 40 IPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 40 lfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
++..|....+|.|+.+||+.+|+ ++..+.++++.|...|++++..
T Consensus 31 il~~L~~~~~~~t~~ela~~l~~---~~stvs~~l~~L~~~G~v~r~~ 75 (152)
T 1ku9_A 31 VYAILYLSDKPLTISDIMEELKI---SKGNVSMSLKKLEELGFVRKVW 75 (152)
T ss_dssp HHHHHHHCSSCEEHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEC
T ss_pred HHHHHHHcCCCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEEEe
Confidence 34444311268999999999999 7899999999999999999874
No 426
>2d1h_A ST1889, 109AA long hypothetical transcriptional regulator; helix-turn-helix, intermolecular and intramolecular S-S bond structural genomics; 2.05A {Sulfolobus tokodaii} SCOP: a.4.5.50
Probab=92.49 E-value=0.1 Score=37.71 Aligned_cols=36 Identities=25% Similarity=0.421 Sum_probs=33.9
Q ss_pred CCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 49 KPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 49 ~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
++.|..|||+.+|+ +...+.++|+.|...|++.+..
T Consensus 35 ~~~t~~ela~~l~i---s~~tv~~~l~~L~~~g~v~~~~ 70 (109)
T 2d1h_A 35 KPITSEELADIFKL---SKTTVENSLKKLIELGLVVRTK 70 (109)
T ss_dssp SCEEHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEE
T ss_pred CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCeEeec
Confidence 68999999999999 7899999999999999999875
No 427
>2p5v_A Transcriptional regulator, LRP/ASNC family; NMB0573, structu genomics; 1.99A {Neisseria meningitidis} PDB: 2p6s_A 2p6t_A
Probab=92.34 E-value=0.083 Score=41.79 Aligned_cols=47 Identities=17% Similarity=0.285 Sum_probs=39.9
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
+..|+..|..+ ++.|..|||+.+|+ ++..+.+.++.|...|++....
T Consensus 12 ~~~il~~L~~~-~~~s~~ela~~lg~---s~~tv~~~l~~L~~~G~i~~~~ 58 (162)
T 2p5v_A 12 DIKILQVLQEN-GRLTNVELSERVAL---SPSPCLRRLKQLEDAGIVRQYA 58 (162)
T ss_dssp HHHHHHHHHHC-TTCCHHHHHHHHTS---CHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEeeec
Confidence 44566777654 78999999999999 7899999999999999999753
No 428
>2k4b_A Transcriptional regulator; DNA binding protein, winged helix; NMR {Lactococcus lactis subsp}
Probab=92.23 E-value=0.038 Score=40.21 Aligned_cols=50 Identities=14% Similarity=0.168 Sum_probs=39.4
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCC-CCcchHHHHHHHHHHcCceeeec
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINP-SKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~-~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
++.|+..|.+. ++.|+.||++.++..+ .++..+.++|+-|...|++.+..
T Consensus 37 e~~VL~~L~~~-~~~t~~eL~~~l~~~~~~s~sTVt~~L~rLe~KGlV~R~~ 87 (99)
T 2k4b_A 37 ELIVMRVIWSL-GEARVDEIYAQIPQELEWSLATVKTLLGRLVKKEMLSTEK 87 (99)
T ss_dssp CSHHHHHHHHH-SCEEHHHHHHTCCGGGCCCHHHHHHHHHHHHHTTSCEEEE
T ss_pred HHHHHHHHHhC-CCCCHHHHHHHHhcccCCCHhhHHHHHHHHHHCCCEEEEe
Confidence 44566667653 6899999999998520 14678999999999999999886
No 429
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=92.14 E-value=0.065 Score=34.22 Aligned_cols=47 Identities=19% Similarity=0.337 Sum_probs=40.9
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeee
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQ 86 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~ 86 (306)
+-.|++.|..+||-+.+...|++.|+ +.+-+..+||-|...|++.-+
T Consensus 12 e~~lL~yIr~sGGildI~~~a~kygV---~kdeV~~~LrrLe~KGLI~le 58 (59)
T 2xvc_A 12 ERELLDYIVNNGGFLDIEHFSKVYGV---EKQEVVKLLEALKNKGLIAVE 58 (59)
T ss_dssp HHHHHHHHHHTTSEEEHHHHHHHHCC---CHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHcCCEEeHHHHHHHhCC---CHHHHHHHHHHHHHCCCeecc
Confidence 34577888888899999999999999 678999999999999998754
No 430
>1okr_A MECI, methicillin resistance regulatory protein MECI; bacterial antibiotic resistance, MECI protein, transcriptional regulatory element; 2.4A {Staphylococcus aureus} SCOP: a.4.5.39 PDB: 1sax_A 1sd7_A 2d45_A 1sd6_A
Probab=92.09 E-value=0.044 Score=41.04 Aligned_cols=46 Identities=17% Similarity=0.330 Sum_probs=37.5
Q ss_pred hCcccccccCCCCCCHHHHHHhcC----CCCCCcchHHHHHHHHHHcCceeeec
Q 021867 38 LGIPDIINKHGKPMTLNELVSALT----INPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 38 lglfd~L~~~~~~~t~~eLA~~~g----~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
+.|+..|... ++.|+.+||+.++ + ++..+.++|+.|...|++.+..
T Consensus 13 ~~vL~~l~~~-~~~t~~ela~~l~~~~~~---s~~tv~~~l~~L~~~Glv~r~~ 62 (123)
T 1okr_A 13 WEVMNIIWMK-KYASANNIIEEIQMQKDW---SPKTIRTLITRLYKKGFIDRKK 62 (123)
T ss_dssp HHHHHHHHHH-SSEEHHHHHHHHHHHCCC---CHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHhC-CCcCHHHHHHHHhccCCC---cHhhHHHHHHHHHHCCCeEEEe
Confidence 3344445442 6899999999999 5 5789999999999999999886
No 431
>2fxa_A Protease production regulatory protein HPR; protease porduction, regulation, STR genomics, PSI, protein structure initiative; HET: PGE P6G 1PE; 2.40A {Bacillus subtilis} SCOP: a.4.5.28
Probab=92.06 E-value=0.066 Score=44.30 Aligned_cols=67 Identities=10% Similarity=0.107 Sum_probs=49.5
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.|+..|... +++|..+||+.+++ ++..+.++++.|...|++.+...... .-.-.+.+|+.++.+.
T Consensus 50 q~~iL~~L~~~-~~~t~~eLa~~l~i---~~stvs~~l~~Le~~GlV~r~~~~~D----rR~~~l~LT~~G~~~~ 116 (207)
T 2fxa_A 50 EHHILWIAYQL-NGASISEIAKFGVM---HVSTAFNFSKKLEERGYLRFSKRLND----KRNTYVQLTEEGTEVF 116 (207)
T ss_dssp HHHHHHHHHHH-TSEEHHHHHHHTTC---CHHHHHHHHHHHHHHTSEEEECC----------CEEEECHHHHHHH
T ss_pred HHHHHHHHHHC-CCcCHHHHHHHHCC---CHHHHHHHHHHHHHCCCEEEecCCCC----CceEEEEECHHHHHHH
Confidence 34456667654 68999999999999 78999999999999999998752100 0012578888887544
No 432
>2xig_A Ferric uptake regulation protein; hpfur, transcription, homeostasis; HET: CIT; 1.85A {Helicobacter pylori}
Probab=91.96 E-value=0.12 Score=40.56 Aligned_cols=51 Identities=14% Similarity=0.347 Sum_probs=43.1
Q ss_pred HHHHhCcccccccCCCCCCHHHHHHhc-----CCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 34 CAVELGIPDIINKHGKPMTLNELVSAL-----TINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 34 ~a~~lglfd~L~~~~~~~t~~eLA~~~-----g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
+.-+.-|++.|...+++.|++||.+.+ ++ +...++|.|+.|+..|++.+..
T Consensus 26 T~qR~~IL~~l~~~~~~~sa~ei~~~l~~~~~~i---s~aTVYR~L~~L~e~Glv~~~~ 81 (150)
T 2xig_A 26 SKQREEVVSVLYRSGTHLSPEEITHSIRQKDKNT---SISSVYRILNFLEKENFISVLE 81 (150)
T ss_dssp HHHHHHHHHHHHHCSSCBCHHHHHHHHHHHSTTC---CHHHHHHHHHHHHHTTSEEEEE
T ss_pred CHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCC---CHhhHHHHHHHHHHCCcEEEEE
Confidence 455666888887655799999999998 56 6789999999999999999875
No 433
>1mzb_A Ferric uptake regulation protein; ferric uptake regulator, iron, DTXR, gene regulation; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.42
Probab=91.96 E-value=0.093 Score=40.35 Aligned_cols=49 Identities=16% Similarity=0.372 Sum_probs=40.8
Q ss_pred HHhCcccccccCC-CCCCHHHHHHhc-----CCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 36 VELGIPDIINKHG-KPMTLNELVSAL-----TINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 36 ~~lglfd~L~~~~-~~~t~~eLA~~~-----g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
-+.-|++.|...+ ++.|++||.+.+ ++ +...++|.|+.|+..|++.+..
T Consensus 19 qR~~Il~~L~~~~~~~~sa~ei~~~l~~~~~~i---s~aTVYR~L~~L~e~Glv~~~~ 73 (136)
T 1mzb_A 19 PRVKILQMLDSAEQRHMSAEDVYKALMEAGEDV---GLATVYRVLTQFEAAGLVVRHN 73 (136)
T ss_dssp HHHHHHHHHHCC-CCSBCHHHHHHHHHHTTCCC---CHHHHHHHHHHHHHHTSEEEEC
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHhhCCCC---CHHHHHHHHHHHHHCCcEEEEE
Confidence 3555778887655 799999999998 56 6789999999999999999875
No 434
>4b8x_A SCO5413, possible MARR-transcriptional regulator; winged helix motif; HET: CME; 1.25A {Streptomyces coelicolor}
Probab=91.90 E-value=0.12 Score=40.13 Aligned_cols=62 Identities=10% Similarity=0.183 Sum_probs=45.8
Q ss_pred cccccccC-CCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCC---ceecChhchhhh
Q 021867 40 IPDIINKH-GKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQ---GYVLKNASKLLL 111 (306)
Q Consensus 40 lfd~L~~~-~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~---~y~~t~~s~~l~ 111 (306)
++..|... ++++|..+||+.+++ ++..+.++++.|...|++++.... .++ .+.+|+.++.+.
T Consensus 40 vL~~L~~~~~~~~t~~eLa~~l~~---~~~tvs~~v~~Le~~Glv~r~~~~-------~DrR~~~l~LT~~G~~~~ 105 (147)
T 4b8x_A 40 ALVLLTFSKSGELPMSKIGERLMV---HPTSVTNTVDRLVRSGLVAKRPNP-------NDGRGTLATITDKGREVV 105 (147)
T ss_dssp HHHHHHTSGGGEEEHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEECC-----------CEEEEECHHHHHHH
T ss_pred HHHHHHHCCCCCcCHHHHHHHHCC---CHHHHHHHHHHHHhCCCEEEeecC-------CcCceeEEEECHHHHHHH
Confidence 44445321 268999999999999 789999999999999999987631 122 367888776543
No 435
>1j5y_A Transcriptional regulator, biotin repressor famil; structural genomics, TM1602, BIOT repressor family, JCSG, conserved hypothetical protein; 2.30A {Thermotoga maritima} SCOP: a.4.5.1 d.94.2.1
Probab=91.86 E-value=0.11 Score=42.22 Aligned_cols=57 Identities=19% Similarity=0.373 Sum_probs=45.1
Q ss_pred HHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCc-eeeecccCCCCCCCCCCceecChh
Q 021867 36 VELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGF-FAQQTLNSSRNNNDEEQGYVLKNA 106 (306)
Q Consensus 36 ~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~-l~~~~~~~~~~~~~~~~~y~~t~~ 106 (306)
-...|+++|..+++++|+.+||+.+|+ +.+.++|-++.|...|+ +... .+.|.+.+.
T Consensus 22 R~~~Il~~L~~~~~~~s~~eLa~~l~v---S~~Ti~rdi~~L~~~G~~I~~~-----------~~Gy~l~~~ 79 (187)
T 1j5y_A 22 RLKSIVRILERSKEPVSGAQLAEELSV---SRQVIVQDIAYLRSLGYNIVAT-----------PRGYVLAGG 79 (187)
T ss_dssp HHHHHHHHHHHCSSCBCHHHHHHHHTS---CHHHHHHHHHHHHHHTCCCEEE-----------TTEEECCTT
T ss_pred HHHHHHHHHHHcCCCcCHHHHHHHHCc---CHHHHHHHHHHHHHCCCeEEEE-----------CCEEEECCc
Confidence 345677778754467999999999999 78999999999999999 7654 356776653
No 436
>2cg4_A Regulatory protein ASNC; DNA binding, FFRP, LRP family, transcription, DNA- binding, transcription regulation; 2.4A {Escherichia coli} SCOP: a.4.5.32 d.58.4.2
Probab=91.84 E-value=0.094 Score=40.98 Aligned_cols=46 Identities=11% Similarity=0.213 Sum_probs=39.7
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeee
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQ 86 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~ 86 (306)
+..|+..|..+ ++.|..+||+.+|+ ++..+.+.++.|...|++...
T Consensus 10 d~~il~~L~~~-~~~s~~ela~~lg~---s~~tv~~~l~~L~~~G~i~~~ 55 (152)
T 2cg4_A 10 DRGILEALMGN-ARTAYAELAKQFGV---SPETIHVRVEKMKQAGIITGA 55 (152)
T ss_dssp HHHHHHHHHHC-TTSCHHHHHHHHTS---CHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCc---CHHHHHHHHHHHHHcCCcceE
Confidence 44566777764 78999999999999 789999999999999999975
No 437
>4fx0_A Probable transcriptional repressor protein; helix-turn-helix, DNA binding, transcription regulator; 2.70A {Mycobacterium tuberculosis} PDB: 4fx4_A*
Probab=91.78 E-value=0.14 Score=39.79 Aligned_cols=54 Identities=11% Similarity=0.187 Sum_probs=35.2
Q ss_pred CCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhh
Q 021867 49 KPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLL 110 (306)
Q Consensus 49 ~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l 110 (306)
+++|..+||+.+++ ++..+.++++.|...|++....+.. .=.-...+|+.++.+
T Consensus 51 ~~~t~~eLa~~l~~---~~~tvsr~v~~Le~~glVr~~~~~D-----rR~~~v~LT~~G~~~ 104 (148)
T 4fx0_A 51 IDLTMSELAARIGV---ERTTLTRNLEVMRRDGLVRVMAGAD-----ARCKRIELTAKGRAA 104 (148)
T ss_dssp ---CHHHHHHHHTC---CHHHHHHHHHHHHHTTSBC----------------CCBCHHHHHH
T ss_pred CCcCHHHHHHHHCC---ChhhHHHHHHHHHHCCCEEeeCCCC-----CCeeEEEECHHHHHH
Confidence 56999999999999 7899999999999999995443100 001236677776644
No 438
>2cyy_A Putative HTH-type transcriptional regulator PH151; structural genomics, pyrococcus horikosii OT3, NPPSFA; HET: MSE GLN; 1.80A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2
Probab=91.72 E-value=0.08 Score=41.36 Aligned_cols=46 Identities=17% Similarity=0.224 Sum_probs=39.6
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeee
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQ 86 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~ 86 (306)
+..|+..|..+ ++.|..+||+.+|+ ++..+.+.++.|...|++...
T Consensus 9 ~~~il~~L~~~-~~~s~~ela~~lg~---s~~tv~~~l~~L~~~G~i~~~ 54 (151)
T 2cyy_A 9 DKKIIKILQND-GKAPLREISKITGL---AESTIHERIRKLRESGVIKKF 54 (151)
T ss_dssp HHHHHHHHHHC-TTCCHHHHHHHHCS---CHHHHHHHHHHHHHHTSSCCC
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCeEEE
Confidence 44566777654 78999999999999 789999999999999999875
No 439
>2dbb_A Putative HTH-type transcriptional regulator PH006; ASNC family, helix-turn-helix (HTH) domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=91.67 E-value=0.1 Score=40.65 Aligned_cols=46 Identities=17% Similarity=0.307 Sum_probs=39.9
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeee
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQ 86 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~ 86 (306)
+..|+..|..+ ++.|..+||+.+|+ ++..+.+.++.|...|++.+.
T Consensus 11 d~~il~~L~~~-~~~s~~ela~~lg~---s~~tv~~~l~~L~~~G~i~~~ 56 (151)
T 2dbb_A 11 DMQLVKILSEN-SRLTYRELADILNT---TRQRIARRIDKLKKLGIIRKF 56 (151)
T ss_dssp HHHHHHHHHHC-TTCCHHHHHHHTTS---CHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEEE
Confidence 44567777764 78999999999999 789999999999999999865
No 440
>3i4p_A Transcriptional regulator, ASNC family; PSI, structural genom protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens str}
Probab=91.61 E-value=0.11 Score=41.26 Aligned_cols=47 Identities=13% Similarity=0.326 Sum_probs=40.9
Q ss_pred HHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeee
Q 021867 36 VELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQ 86 (306)
Q Consensus 36 ~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~ 86 (306)
.+..|+++|.++ +++|..+||+++|+ ++..+.+-++.|...|++...
T Consensus 4 ~d~~il~~L~~~-~~~s~~~la~~lg~---s~~tv~~rl~~L~~~g~i~~~ 50 (162)
T 3i4p_A 4 LDRKILRILQED-STLAVADLAKKVGL---STTPCWRRIQKMEEDGVIRRR 50 (162)
T ss_dssp HHHHHHHHHTTC-SCSCHHHHHHHHTC---CHHHHHHHHHHHHHTTSSCCC
T ss_pred HHHHHHHHHHHC-CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCeeec
Confidence 355677888764 79999999999999 789999999999999999865
No 441
>1v4r_A Transcriptional repressor; helix-turn-helix, winged-helix, gene regulation; NMR {Streptomyces} SCOP: a.4.5.6
Probab=91.57 E-value=0.19 Score=36.38 Aligned_cols=54 Identities=11% Similarity=0.274 Sum_probs=42.2
Q ss_pred HHHHHHHHhCccc-ccccCCCCC-CHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 30 MSLKCAVELGIPD-IINKHGKPM-TLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 30 ~~l~~a~~lglfd-~L~~~~~~~-t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
..+...++..|.. .+.. |..+ |..+||+.+|+ +...+++.|+.|...|++....
T Consensus 14 ~~l~~~i~~~I~~~~l~~-g~~lps~~eLa~~~~v---Sr~tvr~al~~L~~~Gli~~~~ 69 (102)
T 1v4r_A 14 ADVATHFRTLIKSGELAP-GDTLPSVADIRAQFGV---AAKTVSRALAVLKSEGLVSSRG 69 (102)
T ss_dssp HHHHHHHHHHTTTTSCCT-TSBCCCHHHHHHHSSS---CTTHHHHHTTTTTTSSCCEEET
T ss_pred HHHHHHHHHHHHhCCCCC-cCCCcCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEEeC
Confidence 3455555666665 4443 3566 99999999999 6789999999999999998775
No 442
>2ia0_A Putative HTH-type transcriptional regulator PF086; ASNC, PSI, structural genomics, southeast collaboratory for structural genomics; 2.37A {Pyrococcus furiosus}
Probab=91.39 E-value=0.12 Score=41.37 Aligned_cols=46 Identities=17% Similarity=0.260 Sum_probs=39.7
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeee
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQ 86 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~ 86 (306)
+..|+..|..+ ++.|..|||+++|+ ++..+.+.++.|...|++...
T Consensus 19 d~~IL~~L~~~-~~~s~~eLA~~lgl---S~~tv~~~l~~L~~~G~I~~~ 64 (171)
T 2ia0_A 19 DRNILRLLKKD-ARLTISELSEQLKK---PESTIHFRIKKLQERGVIERY 64 (171)
T ss_dssp HHHHHHHHHHC-TTCCHHHHHHHHTS---CHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEee
Confidence 44567777764 68999999999999 789999999999999999865
No 443
>2e1c_A Putative HTH-type transcriptional regulator PH151; DNA-binding, transcriptional regulatory protein, archaeal; HET: DNA; 2.10A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2 PDB: 1ri7_A* 2zny_A* 2znz_A*
Probab=91.01 E-value=0.12 Score=41.54 Aligned_cols=47 Identities=17% Similarity=0.241 Sum_probs=40.7
Q ss_pred HHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeee
Q 021867 36 VELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQ 86 (306)
Q Consensus 36 ~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~ 86 (306)
.+..|+..|..+ ++.|..|||+++|+ ++..+.+.++.|...|++...
T Consensus 28 ~d~~IL~~L~~~-~~~s~~eLA~~lgl---S~~tv~~rl~~L~~~G~I~~~ 74 (171)
T 2e1c_A 28 IDKKIIKILQND-GKAPLREISKITGL---AESTIHERIRKLRESGVIKKF 74 (171)
T ss_dssp HHHHHHHHHHHC-TTCCHHHHHHHHTS---CHHHHHHHHHHHHHTTSSCCC
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCeEee
Confidence 455677777764 78999999999999 789999999999999999865
No 444
>1i1g_A Transcriptional regulator LRPA; helix-turn-helix, LRP/ASNC family; 2.90A {Pyrococcus furiosus} SCOP: a.4.5.32 d.58.4.2
Probab=90.89 E-value=0.11 Score=39.89 Aligned_cols=46 Identities=20% Similarity=0.286 Sum_probs=38.5
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeee
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQ 86 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~ 86 (306)
+..|+..|..+ ++.|..+||+.+|+ ++..+.+.++.|...|++...
T Consensus 6 ~~~il~~L~~~-~~~~~~ela~~lg~---s~~tv~~~l~~L~~~G~i~~~ 51 (141)
T 1i1g_A 6 DKIILEILEKD-ARTPFTEIAKKLGI---SETAVRKRVKALEEKGIIEGY 51 (141)
T ss_dssp HHHHHHHHHHC-TTCCHHHHHHHHTS---CHHHHHHHHHHHHHHTSSCCC
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEecc
Confidence 34456666653 68999999999999 789999999999999999865
No 445
>1sfu_A 34L protein; protein/Z-DNA complex, DNA binding protein/DNA complex; 2.00A {Yaba-like disease virus} SCOP: a.4.5.19
Probab=90.80 E-value=0.34 Score=33.01 Aligned_cols=43 Identities=14% Similarity=0.047 Sum_probs=36.6
Q ss_pred ccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 41 PDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 41 fd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
++.|+. ++..|+.+||.++|+ +..-+.|+|.-|...|.+....
T Consensus 21 i~~L~~-~~~~Ta~~IAkkLg~---sK~~vNr~LY~L~kkG~V~~~~ 63 (75)
T 1sfu_A 21 VLSLNT-NDYTTAISLSNRLKI---NKKKINQQLYKLQKEDTVKMVP 63 (75)
T ss_dssp HHTSCT-TCEECHHHHHHHTTC---CHHHHHHHHHHHHHTTSEEEEC
T ss_pred HHhCCC-CcchHHHHHHHHHCC---CHHHHHHHHHHHHHCCCEecCC
Confidence 346665 355999999999999 5688999999999999998875
No 446
>3k2z_A LEXA repressor; winged helix-turn-helix, SOS system, autoca cleavage, DNA damage, DNA repair, DNA replication, DNA-BIND hydrolase; 1.37A {Thermotoga maritima}
Probab=90.73 E-value=0.13 Score=42.08 Aligned_cols=40 Identities=20% Similarity=0.391 Sum_probs=33.9
Q ss_pred ccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 45 NKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 45 ~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
.+.|.|.|..|||+.+|+ +...+.+.|+.|...|++.+..
T Consensus 19 ~~~g~~~s~~eia~~lgl---~~~tv~~~l~~Le~~G~i~~~~ 58 (196)
T 3k2z_A 19 EKNGYPPSVREIARRFRI---TPRGALLHLIALEKKGYIERKN 58 (196)
T ss_dssp HHHSSCCCHHHHHHHHTS---CHHHHHHHHHHHHHTTSEECC-
T ss_pred HHhCCCCCHHHHHHHcCC---CcHHHHHHHHHHHHCCCEEecC
Confidence 333468999999999999 5568999999999999999874
No 447
>1p4x_A Staphylococcal accessory regulator A homologue; winged-helix protein, transcription; 2.20A {Staphylococcus aureus} SCOP: a.4.5.28 a.4.5.28
Probab=90.50 E-value=0.18 Score=43.15 Aligned_cols=65 Identities=18% Similarity=0.265 Sum_probs=49.9
Q ss_pred HhCcccccccCC-CCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCC---ceecChhchhhh
Q 021867 37 ELGIPDIINKHG-KPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQ---GYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~-~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~---~y~~t~~s~~l~ 111 (306)
++.|+..|..++ +++|..+||+.+++ ++..+.++++-|...|++++.... .++ ...+|+.++.+.
T Consensus 160 q~~vL~~L~~~~~~~~t~~eLa~~l~i---~~~tvt~~v~rLe~~GlV~R~~~~-------~DrR~~~i~LT~~G~~~~ 228 (250)
T 1p4x_A 160 EFTILAIITSQNKNIVLLKDLIETIHH---KYPQTVRALNNLKKQGYLIKERST-------EDERKILIHMDDAQQDHA 228 (250)
T ss_dssp HHHHHHHHHTTTTCCEEHHHHHHHSSS---CHHHHHHHHHHHHHHTSSEEEECS-------SSTTCEEEECCHHHHHHH
T ss_pred HHHHHHHHHhCCCCCcCHHHHHHHHCC---ChhhHHHHHHHHHHCCCEEeeCCC-------CCCCeEEEEECHHHHHHH
Confidence 455667776644 36999999999999 789999999999999999997631 122 367888777544
No 448
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=90.49 E-value=0.87 Score=41.39 Aligned_cols=65 Identities=20% Similarity=0.333 Sum_probs=40.1
Q ss_pred CchHHHHHHHHHHhchhhhHHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHH-------CCCCeEEEecchHHHHh
Q 021867 164 EPKINNFFNEAMASDARLATRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKA-------FPNLECTDFDLPHVVNG 234 (306)
Q Consensus 164 ~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~-------~p~~~~~~~Dl~~~~~~ 234 (306)
.|+....|.+..+.+. .+. ..... .+.+-.|+++|+|+|.++..+++. +..+++++++..+.+..
T Consensus 54 apeis~~FGe~la~~~---~~~-w~~~g--~p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~ 125 (387)
T 1zkd_A 54 SPEISQMFGELLGLWS---ASV-WKAAD--EPQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQ 125 (387)
T ss_dssp HHHHCHHHHHHHHHHH---HHH-HHHTT--CCSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHH
T ss_pred CCchHHHHHHHHHHHH---HHH-HHHcC--CCCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHH
Confidence 4666556665554332 111 11122 234567999999999999988765 23458999999554443
No 449
>2g9w_A Conserved hypothetical protein; DNA-binding domain, bacterial transcription repressor, DNA B protein; 1.80A {Mycobacterium tuberculosis} SCOP: a.4.5.39
Probab=90.24 E-value=0.15 Score=39.11 Aligned_cols=48 Identities=19% Similarity=0.264 Sum_probs=39.7
Q ss_pred HhCcccccccCCCCCCHHHHHHhcC----CCCCCcchHHHHHHHHHHcCceeeec
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALT----INPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g----~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
++.|+..|....+++|+.+|++.++ + +...+.++|+-|...|++.+..
T Consensus 11 e~~vL~~L~~~~~~~t~~el~~~l~~~~~~---~~~Tvt~~l~rLe~kGlv~r~~ 62 (138)
T 2g9w_A 11 ERAVMDHLWSRTEPQTVRQVHEALSARRDL---AYTTVMAVLQRLAKKNLVLQIR 62 (138)
T ss_dssp HHHHHHHHHTCSSCEEHHHHHHHHTTTCCC---CHHHHHHHHHHHHHTTSEEEEC
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHhccCCC---CHHHHHHHHHHHHHCCCEEEEe
Confidence 4556666665226899999999998 6 6789999999999999999885
No 450
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=90.23 E-value=1.3 Score=38.27 Aligned_cols=155 Identities=17% Similarity=0.105 Sum_probs=92.9
Q ss_pred HHHHhhcCCCChhhhh--c-CCCcccc----ccCCchHHHHHHHHHHh-ch-hhhHHHHHhhchhhhcCCCeEEEecCCc
Q 021867 137 LSTWFQNDDPTPFDTL--H-GKSFWVY----AGDEPKINNFFNEAMAS-DA-RLATRVVIHKCKDVFEGLNSLVDVGGGI 207 (306)
Q Consensus 137 l~~~l~~~~~~~~~~~--~-g~~~~e~----~~~~~~~~~~f~~~m~~-~~-~~~~~~~~~~~~~~~~~~~~vlDvGgG~ 207 (306)
+-++++... .||... | |...|+- ..+..|......+.+.. .. ......+.+.+.. + +...+||+=+|+
T Consensus 26 ~l~~l~~K~-kp~~~iDTHAG~G~Y~L~~~~a~ktgE~~~GI~rl~~~~~~~p~~l~~yf~~l~~-~-n~~~~LDlfaGS 102 (283)
T 2oo3_A 26 LLAYLTHKD-KPLFYLETHSGRGIYDLKDKQSLKTEEYKEGINPVWLDRENLPSLFLEYISVIKQ-I-NLNSTLSYYPGS 102 (283)
T ss_dssp HHHHHTTSS-SCCEEEESCCTTSEEETTCC----CCGGGGTHHHHHHTGGGSCGGGHHHHHHHHH-H-SSSSSCCEEECH
T ss_pred HHHHHhcCC-CCeEEEEcCCCcCccCCCChHHhhcHHHHHHHHHHHhcccCCcHHHHHHHHHHHH-h-cCCCceeEeCCc
Confidence 334454332 455322 2 5666643 23566666666666552 11 1112233333331 2 356789999999
Q ss_pred cHHHHHHHHHCCCCeEEEecc-hHHHHhchh---cCCCeEEEeccCCCC----CC---CccEEEehhhhccCCchHHHHH
Q 021867 208 GTVAKAIAKAFPNLECTDFDL-PHVVNGLES---DLANLKYVGGDMFEA----IP---PADAVLLKWILHDWNDEECVKI 276 (306)
Q Consensus 208 G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~---~~~rv~~~~~d~~~~----~p---~~D~~~~~~vlh~~~d~~~~~i 276 (306)
|.++.++++ +.-+++.+|+ +..++..++ ..++++++..|.++- .| .+|+|++-=.... ..+..++
T Consensus 103 GaLgiEaLS--~~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPYe~--k~~~~~v 178 (283)
T 2oo3_A 103 PYFAINQLR--SQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYER--KEEYKEI 178 (283)
T ss_dssp HHHHHHHSC--TTSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCCCS--TTHHHHH
T ss_pred HHHHHHHcC--CCCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCCCC--CcHHHHH
Confidence 999999998 3468999999 777776665 457899999997651 12 4899888544432 1234456
Q ss_pred HHHHHHhc--CCCCCCcEEEEEeeecC
Q 021867 277 LKKCKEAV--TSDDKKGKVIIIDMIRE 301 (306)
Q Consensus 277 L~~~~~~L--~p~~~gg~lli~e~~~~ 301 (306)
++.+.+.. .| +|.++|.=++++
T Consensus 179 l~~L~~~~~r~~---~Gi~v~WYPi~~ 202 (283)
T 2oo3_A 179 PYAIKNAYSKFS---TGLYCVWYPVVN 202 (283)
T ss_dssp HHHHHHHHHHCT---TSEEEEEEEESS
T ss_pred HHHHHHhCccCC---CeEEEEEEeccc
Confidence 66666543 34 788888877654
No 451
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=89.96 E-value=2 Score=38.78 Aligned_cols=96 Identities=14% Similarity=0.199 Sum_probs=64.2
Q ss_pred CeEEEecCCccHHHHHHHHHCCCCe-EEEecc-hHHHHhchhcCCCeEEEeccCCCC----C-------CCccEEEehhh
Q 021867 198 NSLVDVGGGIGTVAKAIAKAFPNLE-CTDFDL-PHVVNGLESDLANLKYVGGDMFEA----I-------PPADAVLLKWI 264 (306)
Q Consensus 198 ~~vlDvGgG~G~~~~~l~~~~p~~~-~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~~----~-------p~~D~~~~~~v 264 (306)
-+++|+=||.|.++..+.++. .+ +.++|. +..++..+...+...++.+|+.+- + +.+|+++..-.
T Consensus 3 ~~vidLFsG~GGlslG~~~aG--~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpP 80 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG--FDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPP 80 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT--CEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCC
T ss_pred CeEEEEccCcCHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCC
Confidence 379999999999999999885 54 457888 555554444445677888888762 1 35899998777
Q ss_pred hccCC-------chHHHHHHHH---HHHhcCCCCCCcEEEEEeeec
Q 021867 265 LHDWN-------DEECVKILKK---CKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 265 lh~~~-------d~~~~~iL~~---~~~~L~p~~~gg~lli~e~~~ 300 (306)
.-.|+ ++....++.. +.+.++| +++|+|.|.
T Consensus 81 CQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P-----~~~v~ENV~ 121 (376)
T 3g7u_A 81 CQGFSSIGKGNPDDSRNQLYMHFYRLVSELQP-----LFFLAENVP 121 (376)
T ss_dssp CCTTC-------CHHHHHHHHHHHHHHHHHCC-----SEEEEEECT
T ss_pred CCCcccccCCCCCCchHHHHHHHHHHHHHhCC-----CEEEEecch
Confidence 65554 1222234443 3344566 788888764
No 452
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=89.87 E-value=0.44 Score=40.67 Aligned_cols=41 Identities=22% Similarity=0.151 Sum_probs=33.9
Q ss_pred cCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc-hHHHHhchh
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL-PHVVNGLES 237 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~ 237 (306)
.....|||..||+|..+.+..+. +.+++++|+ +..++.+++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~~~ 252 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQANF 252 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHH
Confidence 45679999999999999998876 468999999 777776654
No 453
>2w57_A Ferric uptake regulation protein; gene regulation, transcription regulation, transport, iron, repressor, DNA-binding, transcription; 2.60A {Vibrio cholerae}
Probab=89.78 E-value=0.14 Score=40.07 Aligned_cols=49 Identities=20% Similarity=0.383 Sum_probs=40.8
Q ss_pred HHhCcccccccCC-CCCCHHHHHHhc-----CCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 36 VELGIPDIINKHG-KPMTLNELVSAL-----TINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 36 ~~lglfd~L~~~~-~~~t~~eLA~~~-----g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
-+.-|++.|...+ ++.|++||.+.+ ++ +...++|.|+.|+..|++.+..
T Consensus 18 qR~~Il~~L~~~~~~h~sa~ei~~~l~~~~~~i---s~aTVYR~L~~L~e~Glv~~~~ 72 (150)
T 2w57_A 18 PRLKILEVLQQPECQHISAEELYKKLIDLGEEI---GLATVYRVLNQFDDAGIVTRHH 72 (150)
T ss_dssp HHHHHHHHHTSGGGSSEEHHHHHHHHHHTTCCC---CHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHhCCCC---CHHHHHHHHHHHHHCCcEEEEE
Confidence 3455777776554 689999999998 55 6789999999999999999875
No 454
>2dk5_A DNA-directed RNA polymerase III 39 kDa polypeptide; structural genomics, winged helix domain, NPPSFA; NMR {Homo sapiens} SCOP: a.4.5.85
Probab=89.42 E-value=0.16 Score=36.18 Aligned_cols=47 Identities=11% Similarity=0.113 Sum_probs=38.1
Q ss_pred hCcccccccCC-CCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 38 LGIPDIINKHG-KPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 38 lglfd~L~~~~-~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
+.|+..|..++ .+++..+||+++++ +...+.++|+.|...|++.+..
T Consensus 23 ~~Vl~~I~~~g~~gi~qkeLa~~~~l---~~~tvt~iLk~LE~kglIkr~~ 70 (91)
T 2dk5_A 23 KLVYQIIEDAGNKGIWSRDVRYKSNL---PLTEINKILKNLESKKLIKAVK 70 (91)
T ss_dssp HHHHHHHHHHCTTCEEHHHHHHHTTC---CHHHHHHHHHHHHHTTSEEEEC
T ss_pred HHHHHHHHHcCCCCcCHHHHHHHHCC---CHHHHHHHHHHHHHCCCEEEec
Confidence 33455555421 47999999999999 7899999999999999999654
No 455
>2vn2_A DNAD, chromosome replication initiation protein; DNA replication, primosome; 2.3A {Geobacillus kaustophilus HTA426}
Probab=89.02 E-value=0.4 Score=36.33 Aligned_cols=36 Identities=22% Similarity=0.286 Sum_probs=33.0
Q ss_pred CCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 49 KPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 49 ~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
...|..+||+.+|+ ++..+.+.++.|...|+++...
T Consensus 50 ~~ps~~~LA~~l~~---s~~~V~~~l~~Le~kGlI~~~~ 85 (128)
T 2vn2_A 50 LFPTPAELAERMTV---SAAECMEMVRRLLQKGMIAIEE 85 (128)
T ss_dssp SSCCHHHHHHTSSS---CHHHHHHHHHHHHHTTSSEECC
T ss_pred CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEEEe
Confidence 34799999999999 7899999999999999999875
No 456
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=88.97 E-value=0.64 Score=42.60 Aligned_cols=54 Identities=13% Similarity=0.160 Sum_probs=41.0
Q ss_pred cCCCeEEEecCCccHHHHHHH-HHCCC-CeEEEecc-hHHHHhchh---c-----C-CCeEEEecc
Q 021867 195 EGLNSLVDVGGGIGTVAKAIA-KAFPN-LECTDFDL-PHVVNGLES---D-----L-ANLKYVGGD 248 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~-~~~p~-~~~~~~Dl-~~~~~~a~~---~-----~-~rv~~~~~d 248 (306)
.+..+++|||++.|.++..++ +..+. .+++.++. |...+..++ . . ++|+++..-
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~a 290 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCG 290 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSE
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeE
Confidence 567899999999999999988 67776 79999998 666665544 2 3 677766543
No 457
>3cta_A Riboflavin kinase; structural genomics, transferase, PSI-2, protein structure initiative; 2.20A {Thermoplasma acidophilum dsm 1728} SCOP: a.4.5.28 b.43.5.2
Probab=88.88 E-value=0.33 Score=40.69 Aligned_cols=53 Identities=17% Similarity=0.204 Sum_probs=44.1
Q ss_pred CCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 49 KPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 49 ~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
++.|..++|+.+++ ++..+++.++.|...|+|.+... .....+.+|+.++.+.
T Consensus 26 ~~~s~s~aA~~L~i---sq~avSr~I~~LE~~~L~~R~~~-------~R~~~v~LT~~G~~l~ 78 (230)
T 3cta_A 26 AYLTSSKLADMLGI---SQQSASRIIIDLEKNGYITRTVT-------KRGQILNITEKGLDVL 78 (230)
T ss_dssp EECCHHHHHHHHTS---CHHHHHHHHHHHHHTTSEEEEEE-------TTEEEEEECHHHHHHH
T ss_pred CCcCHHHHHHHHCC---CHHHHHHHHHHHHHCCCEEEEEc-------CCeEEEEECHHHHHHH
Confidence 67999999999999 78999999999999999999831 0025688999887654
No 458
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=88.82 E-value=0.46 Score=40.67 Aligned_cols=97 Identities=19% Similarity=0.214 Sum_probs=65.3
Q ss_pred cCCCeEEEecCCccHHHHHHHHH-------CCCCeEEEecc----hHH------------------------HHhc----
Q 021867 195 EGLNSLVDVGGGIGTVAKAIAKA-------FPNLECTDFDL----PHV------------------------VNGL---- 235 (306)
Q Consensus 195 ~~~~~vlDvGgG~G~~~~~l~~~-------~p~~~~~~~Dl----~~~------------------------~~~a---- 235 (306)
.-+..|+++|+-.|..+..+++. .++-++.++|. |+. +...
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 44679999999999988887652 46778999995 321 1100
Q ss_pred ---hh---cCCCeEEEeccCCC--C-----CC--CccEEEehhhhccCCchHHHHHHHHHHHhcCCCCCCcEEEEEee
Q 021867 236 ---ES---DLANLKYVGGDMFE--A-----IP--PADAVLLKWILHDWNDEECVKILKKCKEAVTSDDKKGKVIIIDM 298 (306)
Q Consensus 236 ---~~---~~~rv~~~~~d~~~--~-----~p--~~D~~~~~~vlh~~~d~~~~~iL~~~~~~L~p~~~gg~lli~e~ 298 (306)
+. ..++|+++.|++.+ | .| .+|++++-- |+ -+.....+..+...|+| ||.|++-|+
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~---D~-Y~~t~~~le~~~p~l~~---GGvIv~DD~ 218 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDL---DL-YEPTKAVLEAIRPYLTK---GSIVAFDEL 218 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECC---CC-HHHHHHHHHHHGGGEEE---EEEEEESST
T ss_pred hhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcC---cc-cchHHHHHHHHHHHhCC---CcEEEEcCC
Confidence 01 24899999999976 2 23 378887755 22 12345679999999998 555555543
No 459
>2b0l_A GTP-sensing transcriptional pleiotropic repressor; CODY, DNA-binding, nucleotide-binding, transcript regulation, winged HTH motif.; 2.90A {Bacillus subtilis} SCOP: a.4.5.66
Probab=88.65 E-value=0.58 Score=33.98 Aligned_cols=44 Identities=11% Similarity=0.264 Sum_probs=36.2
Q ss_pred cccccccCCCCC-CHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 40 IPDIINKHGKPM-TLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 40 lfd~L~~~~~~~-t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
|+..|.. ++.+ |..+||+.+|+ +...+++-|+.|...|+++...
T Consensus 33 I~~~l~~-g~~lps~~eLa~~lgV---Sr~tVr~al~~L~~~GlI~~~~ 77 (102)
T 2b0l_A 33 IFEELDG-NEGLLVASKIADRVGI---TRSVIVNALRKLESAGVIESRS 77 (102)
T ss_dssp HTTSSBT-TEEEECHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHhhhcC-CCcCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEEEe
Confidence 3344544 3455 99999999999 7889999999999999999875
No 460
>3i71_A Ethanolamine utilization protein EUTK; helix-turn-helix, unknown function; HET: FLC; 2.10A {Escherichia coli}
Probab=88.54 E-value=0.66 Score=29.62 Aligned_cols=44 Identities=18% Similarity=0.243 Sum_probs=38.9
Q ss_pred CCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChh
Q 021867 49 KPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNA 106 (306)
Q Consensus 49 ~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~ 106 (306)
.++|+.|+|...|+ +.+..+.-|..|...|-+.+.. .+|++.|-
T Consensus 17 QGMTaGEVAA~f~w---~Le~ar~aLeqLf~~G~LRKRs-----------SRYrlkph 60 (68)
T 3i71_A 17 QGMTAGEVAAHFGW---PLEKARNALEQLFSAGTLRKRS-----------SRYRLKPH 60 (68)
T ss_dssp TCBCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEC-----------CEEEECC-
T ss_pred ccccHHHHHHHhCC---cHHHHHHHHHHHHhcchhhhhc-----------cccccCcc
Confidence 68999999999999 6788899999999999999984 78988763
No 461
>1fx7_A Iron-dependent repressor IDER; DTXR, iron-dependent regulator, signaling protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.4.5.24 a.76.1.1 b.34.1.2 PDB: 1u8r_A
Probab=88.19 E-value=0.46 Score=39.80 Aligned_cols=48 Identities=10% Similarity=0.111 Sum_probs=41.5
Q ss_pred CCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 51 MTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 51 ~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
.+..+||+.+++ ++..+.++++.|...|++++.. ...+.+|+.++.+.
T Consensus 25 ~~~~~La~~l~v---s~~tvs~~l~~Le~~GlV~r~~----------~~~v~LT~~G~~~~ 72 (230)
T 1fx7_A 25 PLRARIAERLDQ---SGPTVSQTVSRMERDGLLRVAG----------DRHLELTEKGRALA 72 (230)
T ss_dssp CCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEECT----------TSCEEECHHHHHHH
T ss_pred CcHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEEeC----------CccEEECHHHHHHH
Confidence 345999999999 7899999999999999999986 46799999987544
No 462
>2qq9_A Diphtheria toxin repressor; regulator, DTXR, helix-turn-helix, metal ION, ACT DNA-binding, ferrous iron, transcription; 1.71A {Corynebacterium diphtheriae} PDB: 2tdx_A 1ddn_A 1g3t_A 1g3s_A 1g3w_A 2qqa_A 2qqb_A 2dtr_A 1bi0_A 1bi2_A 1bi3_A 1dpr_A 1bi1_A 1fwz_A 1g3y_A 1c0w_A* 3glx_A 1p92_A 1xcv_A 1f5t_A ...
Probab=88.14 E-value=0.64 Score=38.83 Aligned_cols=49 Identities=8% Similarity=0.116 Sum_probs=42.4
Q ss_pred CCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 50 PMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 50 ~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
+.+..+||+.+++ ++..+.++++.|...|++++.. ...+.+|+.++.+.
T Consensus 24 ~~~~~~la~~l~v---s~~tvs~~l~~Le~~GlV~r~~----------~~~v~LT~~G~~~~ 72 (226)
T 2qq9_A 24 TPLRARIAERLEQ---SGPTVSQTVARMERDGLVVVAS----------DRSLQMTPTGRTLA 72 (226)
T ss_dssp CCBHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEECT----------TSBEEECHHHHHHH
T ss_pred CccHHHHHHHHCC---CHHHHHHHHHHHHHCCCEEEeC----------CCCeEECHHHHHHH
Confidence 4466999999999 7899999999999999999986 46799999987544
No 463
>1sd4_A Penicillinase repressor; BLAI, MECI, methicillin, B-lactam, DNA binding PR; 2.00A {Staphylococcus aureus} SCOP: a.4.5.39 PDB: 1xsd_A
Probab=87.96 E-value=0.18 Score=37.65 Aligned_cols=50 Identities=18% Similarity=0.263 Sum_probs=39.4
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCC-CCcchHHHHHHHHHHcCceeeec
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINP-SKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~-~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
++.|+..|... +|.|..+||+.++.+. .++..+.++|+-|...|++.+..
T Consensus 12 q~~vL~~L~~~-~~~t~~el~~~l~~~~~~~~~Tvt~~l~rLe~kGlv~R~~ 62 (126)
T 1sd4_A 12 EWDVMNIIWDK-KSVSANEIVVEIQKYKEVSDKTIRTLITRLYKKEIIKRYK 62 (126)
T ss_dssp HHHHHHHHHHS-SSEEHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHhc-CCCCHHHHHHHHhhcCCCChhhHHHHHHHHHHCCceEEEe
Confidence 44555666654 6899999999997410 05789999999999999999986
No 464
>2pjp_A Selenocysteine-specific elongation factor; SELB, protein-RNA complex, elongation factor, winged- helix, bulge, translation/RNA complex; 2.30A {Escherichia coli}
Probab=87.89 E-value=0.56 Score=35.08 Aligned_cols=55 Identities=9% Similarity=0.152 Sum_probs=43.7
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChh
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNA 106 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~ 106 (306)
.-.|...+.. .|.++.+||+.+++ ++..+..+|+.|+..|.+..-. .+.|.++..
T Consensus 9 ~~~i~~~~~~--~p~~~~~la~~~~~---~~~~~~~~l~~l~~~G~l~~i~----------~~~~~~~~~ 63 (121)
T 2pjp_A 9 WQKAEPLFGD--EPWWVRDLAKETGT---DEQAMRLTLRQAAQQGIITAIV----------KDRYYRNDR 63 (121)
T ss_dssp HHHHGGGCSS--SCEEHHHHHHHTTC---CHHHHHHHHHHHHHTTSEEEEE----------TTEEEEHHH
T ss_pred HHHHHHHHHh--CCCCHHHHHHHhCC---CHHHHHHHHHHHHHCCCEEEec----------CCceECHHH
Confidence 3445566643 57799999999999 7889999999999999999886 466665553
No 465
>2esh_A Conserved hypothetical protein TM0937; APC5794, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.4.5.61
Probab=87.55 E-value=0.85 Score=33.85 Aligned_cols=71 Identities=24% Similarity=0.285 Sum_probs=50.6
Q ss_pred HHHHHhCcccccccCCCCCCHHHHHHhcC--------CCCCCc-chHHHHHHHHHHcCceeeecccCCCCCCCCCCceec
Q 021867 33 KCAVELGIPDIINKHGKPMTLNELVSALT--------INPSKT-RCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVL 103 (306)
Q Consensus 33 ~~a~~lglfd~L~~~~~~~t~~eLA~~~g--------~~~~~~-~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~ 103 (306)
....++-|+.+|.. +|.+.-+|++.+. + ++ ..+.+.|+.|...|+++....... +...-.|.+
T Consensus 11 ~~~~~~~IL~~L~~--~~~~gyel~~~l~~~g~~~~~i---s~~~tly~~L~~Le~~GlI~~~~~~~~---~~~r~~Y~L 82 (118)
T 2esh_A 11 GWWLASTILLLVAE--KPSHGYELAERLAEFGIEIPGI---GHMGNIYRVLADLEESGFLSTEWDTTV---SPPRKIYRI 82 (118)
T ss_dssp HHHHHHHHHHHHHH--SCBCHHHHHHHHHTTCCSSTTC---CCCCCHHHHHHHHHHTTSEEEEEECSS---SSCEEEEEE
T ss_pred cchHHHHHHHHHHc--CCCCHHHHHHHHHHhCCcccCC---CCcchHHHHHHHHHHCCCeEEEeecCC---CCCceEEEE
Confidence 33445556666765 7999999999983 5 68 899999999999999988752100 001235899
Q ss_pred Chhchhhh
Q 021867 104 KNASKLLL 111 (306)
Q Consensus 104 t~~s~~l~ 111 (306)
|+.++.+.
T Consensus 83 T~~G~~~l 90 (118)
T 2esh_A 83 TPQGKLYL 90 (118)
T ss_dssp CHHHHHHH
T ss_pred ChHHHHHH
Confidence 99988543
No 466
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=86.71 E-value=0.33 Score=43.91 Aligned_cols=56 Identities=18% Similarity=0.233 Sum_probs=43.1
Q ss_pred HHHHHHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecc
Q 021867 28 NSMSLKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTL 88 (306)
Q Consensus 28 ~~~~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~ 88 (306)
..++++..-+..|++.|. + +++|..|||+.+|+ ++..+.++++.|...|++.+...
T Consensus 13 ~~~~~~~~~~~~il~~l~-~-~~~sr~~la~~~gl---s~~tv~~~v~~L~~~gli~~~~~ 68 (380)
T 2hoe_A 13 MPKSVRAENISRILKRIM-K-SPVSRVELAEELGL---TKTTVGEIAKIFLEKGIVVEEKD 68 (380)
T ss_dssp ---------CCCSHHHHH-H-SCBCHHHHHHHHTC---CHHHHHHHHHHHHHHTSEEEEEC
T ss_pred CchhHHHHHHHHHHHHHH-c-CCcCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEeecC
Confidence 456777777888999998 5 79999999999999 78999999999999999998753
No 467
>1bia_A BIRA bifunctional protein; transcription regulation; 2.30A {Escherichia coli} SCOP: a.4.5.1 b.34.1.1 d.104.1.2 PDB: 1bib_A* 1hxd_A* 2ewn_A*
Probab=86.39 E-value=0.51 Score=41.75 Aligned_cols=55 Identities=16% Similarity=0.234 Sum_probs=43.7
Q ss_pred hCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecCh
Q 021867 38 LGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKN 105 (306)
Q Consensus 38 lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~ 105 (306)
..|+++|.+ ++++|.++||+.+++ ++..++|-++.|...|++.+... ...|++.+
T Consensus 8 ~~Il~~L~~-~~~~s~~eLa~~l~v---S~~ti~r~l~~L~~~G~~i~~~~---------g~GY~l~~ 62 (321)
T 1bia_A 8 LKLIALLAN-GEFHSGEQLGETLGM---SRAAINKHIQTLRDWGVDVFTVP---------GKGYSLPE 62 (321)
T ss_dssp HHHHHHHTT-SSCBCHHHHHHHHTS---CHHHHHHHHHHHHHTTCCCEEET---------TTEEECSS
T ss_pred HHHHHHHHc-CCCcCHHHHHHHHCC---CHHHHHHHHHHHHhCCCcEEEec---------CCCcEEee
Confidence 346667764 478999999999999 78999999999999999876542 34677754
No 468
>2p8t_A Hypothetical protein PH0730; pyrococcus horikoshii OT3, STR genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: a.4.5.72 d.74.4.2
Probab=86.36 E-value=0.87 Score=37.34 Aligned_cols=49 Identities=20% Similarity=0.308 Sum_probs=42.5
Q ss_pred CCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 49 KPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 49 ~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
+|++..+||+.+|+ .+..++..++.|...|+++... +...+|+.++.++
T Consensus 29 ~~V~~~~LA~~Lgv---S~~SV~~~lkkL~e~GLV~~~~-----------~Gv~LTe~G~~~A 77 (200)
T 2p8t_A 29 EPLGRKQISERLEL---GEGSVRTLLRKLSHLDIIRSKQ-----------RGHFLTLKGKEIR 77 (200)
T ss_dssp SCBCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEC-------------CEEECHHHHHHH
T ss_pred CCccHHHHHHHhCC---CHHHHHHHHHHHHHCCCEEEeC-----------CCeEECHHHHHHH
Confidence 58999999999999 7899999999999999999874 6788999887544
No 469
>1jhg_A Trp operon repressor; complex (regulatory protein-peptide), DNA-binding regulatory complex (regulatory protein-peptide) complex; HET: TRP; 1.30A {Escherichia coli} SCOP: a.4.12.1 PDB: 1co0_A* 1mi7_R 1p6z_R 1wrp_R* 1zt9_A* 2oz9_R* 3ssw_R 3wrp_A 1rcs_A* 1wrs_R* 1wrt_R 2xdi_A 3ssx_R* 1trr_A* 1tro_A*
Probab=86.03 E-value=0.5 Score=34.27 Aligned_cols=42 Identities=17% Similarity=0.101 Sum_probs=34.9
Q ss_pred HHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHH
Q 021867 33 KCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIH 79 (306)
Q Consensus 33 ~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~ 79 (306)
..+.++||+..|.. ++.|..|||+.+|+ +...+.|+-|.|..
T Consensus 43 ~l~~R~~l~~~L~~--ge~TQREIA~~lGi---S~stISRi~r~L~~ 84 (101)
T 1jhg_A 43 ALGTRVRIIEELLR--GEMSQRELKNELGA---GIATITRGSNSLKA 84 (101)
T ss_dssp HHHHHHHHHHHHHH--CCSCHHHHHHHHCC---CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc--CCcCHHHHHHHHCC---ChhhhhHHHHHHHH
Confidence 34557999998876 68999999999999 78889998777754
No 470
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=85.96 E-value=2.6 Score=37.48 Aligned_cols=101 Identities=8% Similarity=0.148 Sum_probs=61.0
Q ss_pred CeEEEecCCccHHHHHHHHHCCCC-eEEEecc-hHHHHhchhcCCCeEEEeccCCCC----CC--CccEEEehhhhccCC
Q 021867 198 NSLVDVGGGIGTVAKAIAKAFPNL-ECTDFDL-PHVVNGLESDLANLKYVGGDMFEA----IP--PADAVLLKWILHDWN 269 (306)
Q Consensus 198 ~~vlDvGgG~G~~~~~l~~~~p~~-~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~~----~p--~~D~~~~~~vlh~~~ 269 (306)
.+++|+-||.|.+...+.++.-.. .+..+|. +..++..+...+...+..+|+.+- ++ .+|+++..-....|+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~fS 82 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFT 82 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC-----
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCCCcchh
Confidence 579999999999999999885333 4677888 666666555344556778888762 23 589999987755443
Q ss_pred c--------hHHHHHHHHHHHhcCCCCCC--cEEEEEeeec
Q 021867 270 D--------EECVKILKKCKEAVTSDDKK--GKVIIIDMIR 300 (306)
Q Consensus 270 d--------~~~~~iL~~~~~~L~p~~~g--g~lli~e~~~ 300 (306)
- +..-.++.++.+.++.- . -+++++|.|.
T Consensus 83 ~ag~~~g~~d~r~~l~~~~~~~i~~~--~~~P~~~~~ENV~ 121 (343)
T 1g55_A 83 RIGRQGDMTDSRTNSFLHILDILPRL--QKLPKYILLENVK 121 (343)
T ss_dssp -------------CHHHHHHHHGGGC--SSCCSEEEEEEET
T ss_pred hcCCcCCccCccchHHHHHHHHHHHh--cCCCCEEEEeCCc
Confidence 2 11122444444444320 1 2677777764
No 471
>1cf7_A Protein (transcription factor E2F-4); E2F, winged-helix, DNA-binding domain, cell cycle, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: a.4.5.17
Probab=85.95 E-value=0.81 Score=31.32 Aligned_cols=37 Identities=16% Similarity=0.383 Sum_probs=33.4
Q ss_pred CCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 49 KPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 49 ~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
+.+++.++|+.+++. ..++++.++.+|.+.|++++..
T Consensus 29 ~~i~l~~aa~~L~v~--~kRRiYDI~NVLe~igli~K~~ 65 (76)
T 1cf7_A 29 GVLDLKLAADTLAVR--QKRRIYDITNVLEGIGLIEKKS 65 (76)
T ss_dssp TEEEHHHHHHHTTTC--CTHHHHHHHHHHHHHTSEEEEE
T ss_pred CcCcHHHHHHHhCCc--cceehhhHHHHHhHhcceeecC
Confidence 789999999999993 2589999999999999999985
No 472
>3elk_A Putative transcriptional regulator TA0346; structural genomics, PSI-2, prote structure initiative; 1.70A {Thermoplasma acidophilum}
Probab=84.73 E-value=0.87 Score=33.88 Aligned_cols=74 Identities=22% Similarity=0.336 Sum_probs=50.9
Q ss_pred HHHHHHHhCcccccccCCCCCCHHHHHHhcC------CCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecC
Q 021867 31 SLKCAVELGIPDIINKHGKPMTLNELVSALT------INPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLK 104 (306)
Q Consensus 31 ~l~~a~~lglfd~L~~~~~~~t~~eLA~~~g------~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t 104 (306)
.+.-.+++-|+.+|.. +|.+.-+|++.+. + ++..+++.|+.|...|+++...... .++...-.|++|
T Consensus 10 l~~g~l~~~IL~lL~~--~p~~gyel~~~l~~~~~~~i---~~gtly~~L~~Le~~GlI~~~~~~~--~~~~~rk~Y~lT 82 (117)
T 3elk_A 10 ILHGLITLYILKELVK--RPMHGYELQKSMFETTGQAL---PQGSIYILLKTMKERGFVISESSVN--EKGQQLTVYHIT 82 (117)
T ss_dssp HHHHHHHHHHHHHHHH--SCEEHHHHHHHHHHHHSCCC---CTTHHHHHHHHHHHHTSEEEEEEEC---CCCEEEEEEEC
T ss_pred HHhhHHHHHHHHHHHc--CCCCHHHHHHHHHHHhCCCC---CcchHHHHHHHHHHCCCEEEEeeec--CCCCCceEEEEC
Confidence 3344455556666765 7999999998886 6 5689999999999999999764200 000012359999
Q ss_pred hhchhhh
Q 021867 105 NASKLLL 111 (306)
Q Consensus 105 ~~s~~l~ 111 (306)
+.++...
T Consensus 83 ~~G~~~l 89 (117)
T 3elk_A 83 DAGKKFL 89 (117)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988433
No 473
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=84.59 E-value=0.38 Score=37.31 Aligned_cols=51 Identities=12% Similarity=0.223 Sum_probs=39.2
Q ss_pred HHhCcccccccCCCCCCHHHHHHhcCC--CCCCcchHHHHHHHHHHcCceeeec
Q 021867 36 VELGIPDIINKHGKPMTLNELVSALTI--NPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 36 ~~lglfd~L~~~~~~~t~~eLA~~~g~--~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
-+.-|++.|...+ +.|++||.+.+.- +..+...++|.|+.|+..|++.+..
T Consensus 20 qR~~Il~~l~~~~-h~ta~ei~~~l~~~~~~is~~TVYR~L~~L~e~Glv~~i~ 72 (145)
T 3eyy_A 20 QRQLVLEAVDTLE-HATPDDILGEVRKTASGINISTVYRTLELLEELGLVSHAH 72 (145)
T ss_dssp HHHHHHHHHHHHS-SBCHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHHHhcC-CCCHHHHHHHHHhhCCCCCHhHHHHHHHHHHHCCcEEEEE
Confidence 3555677776654 8999999998721 1116789999999999999999875
No 474
>3rkx_A Biotin-[acetyl-COA-carboxylase] ligase; biotin protein ligase, 3 domains, enzyme DNA binding, biotin coupling domains; 2.10A {Staphylococcus aureus} PDB: 3rir_A* 3rkw_A 3rky_A* 3v7c_A* 3v7s_A* 3v8j_A 3v7r_A 3v8k_A* 3v8l_A* 4dq2_A*
Probab=84.47 E-value=0.5 Score=41.89 Aligned_cols=57 Identities=14% Similarity=0.218 Sum_probs=44.2
Q ss_pred hCccccccc-CCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChh
Q 021867 38 LGIPDIINK-HGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNA 106 (306)
Q Consensus 38 lglfd~L~~-~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~ 106 (306)
..|+++|.. .+.++|.++||+.+|+ +...+.+.++.|...|+..+..+ ...|++.+.
T Consensus 6 ~~iL~~L~~~~g~~~Sg~eLa~~lgv---Sr~aV~k~i~~L~~~G~~i~~~~---------~~GY~L~~~ 63 (323)
T 3rkx_A 6 QDVLQLLYKNKPNYISGQSIAESLNI---SRTAVKKVIDQLKLEGCKIDSVN---------HKGHLLQQL 63 (323)
T ss_dssp HHHHHHHHHHTTSCBCHHHHHHHHTS---CHHHHHHHHHHHHHTTCEEEEET---------TTEEEEEEC
T ss_pred HHHHHHHHhCCCCccCHHHHHHHHCC---CHHHHHHHHHHHHhcCCeEEEeC---------CCeEEEecC
Confidence 346667742 2358999999999999 78999999999999999666532 457887764
No 475
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=84.42 E-value=4.3 Score=31.84 Aligned_cols=58 Identities=16% Similarity=0.162 Sum_probs=40.6
Q ss_pred HHHHHHHHHHhchhhhHHHHHhhchhhhcCCCeEEEecCCccHHHHHHHHHCCCCeEEEecc
Q 021867 167 INNFFNEAMASDARLATRVVIHKCKDVFEGLNSLVDVGGGIGTVAKAIAKAFPNLECTDFDL 228 (306)
Q Consensus 167 ~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~~~vlDvGgG~G~~~~~l~~~~p~~~~~~~Dl 228 (306)
+.+.|.+.|.+... .....+..+. .-..-|+|+|=|.|..=-+|.+.+|+-++.++|.
T Consensus 15 RLDsfirRltaQR~-~L~~a~~~v~---~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR 72 (174)
T 3iht_A 15 RLDLFIDRMVSQRA-CLEHAIAQTA---GLSGPVYELGLGNGRTYHHLRQHVQGREIYVFER 72 (174)
T ss_dssp HHHHHHHHHHHHHH-HHHHHHHHTT---TCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEES
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHhc---CCCCceEEecCCCChhHHHHHHhCCCCcEEEEEe
Confidence 44556665543322 1222333332 3356799999999999999999999999999997
No 476
>4esf_A PADR-like transcriptional regulator; PADR family, DNA binding protein, HTH fold; 2.20A {Bacillus cereus}
Probab=84.37 E-value=1.3 Score=32.91 Aligned_cols=69 Identities=17% Similarity=0.195 Sum_probs=47.9
Q ss_pred HHHhCcccccccCCCCCCHHHHHHhc------CCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhch
Q 021867 35 AVELGIPDIINKHGKPMTLNELVSAL------TINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASK 108 (306)
Q Consensus 35 a~~lglfd~L~~~~~~~t~~eLA~~~------g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~ 108 (306)
.+++=|+.+|.. +|.+.-+|++.+ ++ ++..++..|+-|...|+++....... ++...-.|++|+.++
T Consensus 11 ~l~~~IL~lL~~--~p~~Gyei~~~l~~~g~~~i---s~gtlY~~L~rLe~~GlI~~~~~~~~--~g~~rk~Y~LT~~G~ 83 (117)
T 4esf_A 11 SLEGCVLEIISR--RETYGYEITRHLNDLGFTEV---VEGTVYTILVRLEKKKLVNIEKKPSD--MGPPRKFYSLNEAGR 83 (117)
T ss_dssp HHHHHHHHHHHH--SCBCHHHHHHHHHHHTCTTC---CHHHHHHHHHHHHHTTCEEEEEEC-------CEEEEEECHHHH
T ss_pred hHHHHHHHHHHc--CCCCHHHHHHHHHHcCCCCC---CccHHHHHHHHHHHCCCEEEEeecCC--CCCCceEEEECHHHH
Confidence 334444555665 799999999998 56 78999999999999999998642000 000123499999988
Q ss_pred hh
Q 021867 109 LL 110 (306)
Q Consensus 109 ~l 110 (306)
..
T Consensus 84 ~~ 85 (117)
T 4esf_A 84 QE 85 (117)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 477
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=84.18 E-value=5.7 Score=34.75 Aligned_cols=84 Identities=17% Similarity=0.158 Sum_probs=52.2
Q ss_pred CCeEEEecCCc-c-HHHHHHHHHCCCCeEEEecc-hHHHHhchhcCCCeEEEeccCCC-CCCCccEEEehhhhccCCchH
Q 021867 197 LNSLVDVGGGI-G-TVAKAIAKAFPNLECTDFDL-PHVVNGLESDLANLKYVGGDMFE-AIPPADAVLLKWILHDWNDEE 272 (306)
Q Consensus 197 ~~~vlDvGgG~-G-~~~~~l~~~~p~~~~~~~Dl-~~~~~~a~~~~~rv~~~~~d~~~-~~p~~D~~~~~~vlh~~~d~~ 272 (306)
..+|.=||+|. | .++..|.+.....+++++|. ++.++.+.+. .-+.-...|..+ -..++|+|++.-. ...
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~-G~~~~~~~~~~~~~~~~aDvVilavp-----~~~ 106 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-GIIDEGTTSIAKVEDFSPDFVMLSSP-----VRT 106 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-TSCSEEESCTTGGGGGCCSEEEECSC-----GGG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC-CCcchhcCCHHHHhhccCCEEEEeCC-----HHH
Confidence 36799999883 3 45556665544348999998 5566665531 111112233333 3446899988743 344
Q ss_pred HHHHHHHHHHhcCC
Q 021867 273 CVKILKKCKEAVTS 286 (306)
Q Consensus 273 ~~~iL~~~~~~L~p 286 (306)
...+++++.+.+++
T Consensus 107 ~~~vl~~l~~~l~~ 120 (314)
T 3ggo_A 107 FREIAKKLSYILSE 120 (314)
T ss_dssp HHHHHHHHHHHSCT
T ss_pred HHHHHHHHhhccCC
Confidence 56788999999988
No 478
>1p4x_A Staphylococcal accessory regulator A homologue; winged-helix protein, transcription; 2.20A {Staphylococcus aureus} SCOP: a.4.5.28 a.4.5.28
Probab=84.13 E-value=0.7 Score=39.36 Aligned_cols=65 Identities=9% Similarity=0.221 Sum_probs=48.9
Q ss_pred HhCcccccccCC-CCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCC---ceecChhchhhh
Q 021867 37 ELGIPDIINKHG-KPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQ---GYVLKNASKLLL 111 (306)
Q Consensus 37 ~lglfd~L~~~~-~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~---~y~~t~~s~~l~ 111 (306)
++.++..|...+ +++|..+||+.+++ ++..+.++++-|...|++.+.... .+. ...+|+.++.+.
T Consensus 36 q~~vL~~L~~~~~~~~~~~el~~~l~~---~~~t~t~~l~rLe~~G~i~R~~~~-------~DrR~~~i~LT~~G~~~~ 104 (250)
T 1p4x_A 36 EFILLTYLFHQQENTLPFKKIVSDLCY---KQSDLVQHIKVLVKHSYISKVRSK-------IDERNTYISISEEQREKI 104 (250)
T ss_dssp HHHHHHHHHSCSCSEEEHHHHHHHSSS---CGGGTHHHHHHHHHTTSCEEEECS-------SSTTSEEEECCHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcCHHHHHHHHCC---CHhhHHHHHHHHHHCCCEEecCCC-------CCCCeEEEEECHHHHHHH
Confidence 344556665432 58999999999999 789999999999999999987631 122 366888876543
No 479
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=83.45 E-value=0.87 Score=41.45 Aligned_cols=47 Identities=6% Similarity=0.200 Sum_probs=40.3
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
+..|++.|..+ +++|..|||+.+|+ ++..+.++++.|...|++.+..
T Consensus 18 ~~~il~~l~~~-~~~sr~~la~~~~l---s~~tv~~~v~~L~~~g~i~~~~ 64 (406)
T 1z6r_A 18 AGAVYRLIDQL-GPVSRIDLSRLAQL---APASITKIVHEMLEAHLVQELE 64 (406)
T ss_dssp HHHHHHHHHSS-CSCCHHHHHHHTTC---CHHHHHHHHHHHHHHTSEEEC-
T ss_pred HHHHHHHHHHc-CCcCHHHHHHHHCC---CHHHHHHHHHHHHHCCcEEeec
Confidence 34467777765 79999999999999 7899999999999999999865
No 480
>3tqn_A Transcriptional regulator, GNTR family; regulatory functions; 2.80A {Coxiella burnetii}
Probab=83.31 E-value=1.4 Score=32.35 Aligned_cols=50 Identities=12% Similarity=0.206 Sum_probs=39.1
Q ss_pred HHHHHHHhCcccccccCCCCC-CHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 31 SLKCAVELGIPDIINKHGKPM-TLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 31 ~l~~a~~lglfd~L~~~~~~~-t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
.|...+..|-+. . |..+ |..+||+.+|+ +...+++.|+.|...|+++...
T Consensus 17 ~i~~~I~~g~~~---~-G~~lPs~~~La~~~~v---Sr~tvr~al~~L~~~Gli~~~~ 67 (113)
T 3tqn_A 17 KIVEAIIDGSYV---E-GEMIPSIRKISTEYQI---NPLTVSKAYQSLLDDNVIEKRR 67 (113)
T ss_dssp HHHHHHHHTSSC---T-TCEECCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEET
T ss_pred HHHHHHHcCCCC---C-CCcCcCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEEec
Confidence 444455555552 2 3556 89999999999 7889999999999999999875
No 481
>2o0m_A Transcriptional regulator, SORC family; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: c.124.1.8
Probab=83.04 E-value=0.24 Score=44.39 Aligned_cols=46 Identities=15% Similarity=0.179 Sum_probs=0.0
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeee
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQ 86 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~ 86 (306)
+..++..|... +++|..|||+.+++ ++..++|.|+.|...|+++..
T Consensus 22 ~~~iL~~l~~~-~~~t~~eLa~~l~v---s~~Tv~r~l~~Le~~Glv~~~ 67 (345)
T 2o0m_A 22 RFQILRNIYWM-QPIGRRSLSETMGI---TERVLRTETDVLKQLNLIEPS 67 (345)
T ss_dssp --------------------------------------------------
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEEE
Confidence 56677788764 79999999999999 789999999999999999854
No 482
>2vxz_A Pyrsv_GP04; viral protein, SSPF, ORF165A; 1.7A {Pyrobaculum spherical virus}
Probab=82.95 E-value=0.7 Score=35.75 Aligned_cols=45 Identities=13% Similarity=0.137 Sum_probs=39.5
Q ss_pred CcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecc
Q 021867 39 GIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTL 88 (306)
Q Consensus 39 glfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~ 88 (306)
.++++|.+ |+.|..+||+++|+ +-..++-+|..|.-.|++.+...
T Consensus 15 ~ILE~Lk~--G~~~t~~Iak~LGl---Shg~aq~~Ly~LeREG~V~~Vk~ 59 (165)
T 2vxz_A 15 DILALLAD--GCKTTSLIQQRLGL---SHGRAKALIYVLEKEGRVTRVAF 59 (165)
T ss_dssp HHHHHHTT--CCEEHHHHHHHHTC---CHHHHHHHHHHHHHTTSCEEEEE
T ss_pred HHHHHHHh--CCccHHHHHHHhCC---cHHHHHHHHHHHHhcCceEEEEE
Confidence 45667773 89999999999999 78899999999999999999873
No 483
>1xma_A Predicted transcriptional regulator; southea collaboratory for structural genomics, secsg, protein struc initiative, PSI; 2.30A {Clostridium thermocellum} SCOP: a.4.5.61
Probab=82.92 E-value=0.67 Score=35.97 Aligned_cols=72 Identities=13% Similarity=0.130 Sum_probs=50.0
Q ss_pred HHHHHhCcccccccCCCCCCHHHHHHhc--------CCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecC
Q 021867 33 KCAVELGIPDIINKHGKPMTLNELVSAL--------TINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLK 104 (306)
Q Consensus 33 ~~a~~lglfd~L~~~~~~~t~~eLA~~~--------g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t 104 (306)
.-..++-|+.+|.. +|.+.-+|++.+ ++ ++..+.++|+-|...|+++....... .+...-.|.+|
T Consensus 39 ~g~~~~~IL~~L~~--~~~~gyeI~~~l~~~~~~~~~i---s~gtLy~~L~rLE~~GlI~~~~~~~~--~~~~rk~Y~LT 111 (145)
T 1xma_A 39 RGYVDTIILSLLIE--GDSYGYEISKNIRIKTDELYVI---KETTLYSAFARLEKNGYIKSYYGEET--QGKRRTYYRIT 111 (145)
T ss_dssp GGTHHHHHHHHHHH--CCEEHHHHHHHHHHHHTTSCCC---CHHHHHHHHHHHHHTTSEEEEEEEEC----CEEEEEEEC
T ss_pred cCcHHHHHHHHHHh--CCCCHHHHHHHHHHhhCCccCc---ChhHHHHHHHHHHHCCCEEEEEeccC--CCCCeEEEEEC
Confidence 33445666666765 689999998888 46 78999999999999999987642100 00012358999
Q ss_pred hhchhhh
Q 021867 105 NASKLLL 111 (306)
Q Consensus 105 ~~s~~l~ 111 (306)
+.++.+.
T Consensus 112 ~~G~~~l 118 (145)
T 1xma_A 112 PEGIKYY 118 (145)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887543
No 484
>3f8b_A Transcriptional regulator, PADR-like family; winged helix turn helix, transcription regulator; 2.00A {Lactococcus lactis subsp} SCOP: a.4.5.0 PDB: 3f8c_A* 3f8f_A*
Probab=82.87 E-value=1.7 Score=32.11 Aligned_cols=72 Identities=10% Similarity=0.214 Sum_probs=49.5
Q ss_pred HHHHHHhCcccccccCCCCCCHHHHHHhc--------CCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceec
Q 021867 32 LKCAVELGIPDIINKHGKPMTLNELVSAL--------TINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVL 103 (306)
Q Consensus 32 l~~a~~lglfd~L~~~~~~~t~~eLA~~~--------g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~ 103 (306)
++-.+++-|+.+|.. +|.+.-+|.+.+ ++ ++..++++|+.|...|+++....... ++...-.|++
T Consensus 9 ~~g~l~~~IL~~L~~--~~~~Gyei~~~l~~~~~~~~~i---~~gtly~~L~rLe~~GlI~~~~~~~~--~~~~rk~Y~L 81 (116)
T 3f8b_A 9 LRAQTNVILLNVLKQ--GDNYVYGIIKQVKEASNGEMEL---NEATLYTIFKRLEKDGIISSYWGDES--QGGRRKYYRL 81 (116)
T ss_dssp HHHHHHHHHHHHHHH--CCBCHHHHHHHHHHHTTTCCCC---CHHHHHHHHHHHHHTTSEEEEEEC------CCEEEEEE
T ss_pred HhchHHHHHHHHHHh--CCCCHHHHHHHHHHHhCCCCCC---CcchHHHHHHHHHHCCCEEEEeeccC--CCCCceEEEE
Confidence 333445555666665 799999999887 45 78999999999999999997631000 0001234899
Q ss_pred Chhchhh
Q 021867 104 KNASKLL 110 (306)
Q Consensus 104 t~~s~~l 110 (306)
|+.++..
T Consensus 82 T~~G~~~ 88 (116)
T 3f8b_A 82 TEIGHEN 88 (116)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 9998743
No 485
>3l7w_A Putative uncharacterized protein SMU.1704; PADR, transcriptional factor, transcription; HET: MSE; 2.20A {Streptococcus mutans} SCOP: a.4.5.0
Probab=81.71 E-value=0.9 Score=33.14 Aligned_cols=65 Identities=18% Similarity=0.325 Sum_probs=46.2
Q ss_pred HHhCcccccccCCCCCCHHHHHHhc----CCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCC--CCceecChhchh
Q 021867 36 VELGIPDIINKHGKPMTLNELVSAL----TINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDE--EQGYVLKNASKL 109 (306)
Q Consensus 36 ~~lglfd~L~~~~~~~t~~eLA~~~----g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~--~~~y~~t~~s~~ 109 (306)
.++-|+..|.. +|.+.-+|++.+ ++ ++..+.++|+.|...|+++...... ++ ...|++|+.++.
T Consensus 10 l~~~IL~~L~~--~~~~gyel~~~l~~~~~i---~~~tly~~L~~Le~~GlI~~~~~~~-----~~r~r~~y~LT~~G~~ 79 (108)
T 3l7w_A 10 IEYLILAIVSK--HDSYGYDISQTIKLIASI---KESTLYPILKKLEKAGYLSTYTQEH-----QGRRRKYYHLTDSGEK 79 (108)
T ss_dssp HHHHHHHHHHH--SCEEHHHHHHHHTTTCCC---CHHHHHHHHHHHHHTTSEEEEEEEE-----TTEEEEEEEECHHHHH
T ss_pred HHHHHHHHHHc--CCCcHHHHHHHHHHHhCC---CcChHHHHHHHHHHCCCeEEEeecC-----CCCcceEEEECHHHHH
Confidence 34445556665 688888887775 67 7899999999999999999864210 00 124889998875
Q ss_pred h
Q 021867 110 L 110 (306)
Q Consensus 110 l 110 (306)
.
T Consensus 80 ~ 80 (108)
T 3l7w_A 80 H 80 (108)
T ss_dssp H
T ss_pred H
Confidence 3
No 486
>4ets_A Ferric uptake regulation protein; metal binding protein, transcription factor; 2.10A {Campylobacter jejuni subsp}
Probab=81.69 E-value=0.94 Score=35.80 Aligned_cols=52 Identities=12% Similarity=0.096 Sum_probs=40.5
Q ss_pred HHhCcccccccCCCCCCHHHHHHhcCC----CCCCcchHHHHHHHHHHcCceeeec
Q 021867 36 VELGIPDIINKHGKPMTLNELVSALTI----NPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 36 ~~lglfd~L~~~~~~~t~~eLA~~~g~----~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
-+.-|++.|...+++.|++||.+.+.- +..+...++|.|+.|+..|++.+..
T Consensus 34 qR~~IL~~L~~~~~h~sA~eI~~~l~~~~~~~~is~aTVYRtL~~L~e~Glv~~i~ 89 (162)
T 4ets_A 34 QREVLLKTLYHSDTHYTPESLYMEIKQAEPDLNVGIATVYRTLNLLEEAEMVTSIS 89 (162)
T ss_dssp HHHHHHHHHHSCCSCBCHHHHHHHHHHHCGGGCCCHHHHHHHHHHHHHTTSEEECC
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 456677777765589999999887621 1126789999999999999999874
No 487
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=81.11 E-value=1 Score=41.43 Aligned_cols=52 Identities=15% Similarity=0.261 Sum_probs=43.7
Q ss_pred HHHHHHhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 32 LKCAVELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 32 l~~a~~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
++..-+..|++.|..+ +++|..|||+.+|+ ++..+.++++.|...|++.+..
T Consensus 36 ~r~~n~~~il~~l~~~-~~~sr~ela~~~gl---s~~tv~~~v~~L~~~gli~~~~ 87 (429)
T 1z05_A 36 IKQINAGRVYKLIDQK-GPISRIDLSKESEL---APASITKITRELIDAHLIHETT 87 (429)
T ss_dssp HHHHHHHHHHHHHHHH-CSBCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEEC
T ss_pred HHHHHHHHHHHHHHHc-CCcCHHHHHHHHCC---CHHHHHHHHHHHHHCCCEEecc
Confidence 3444455578888764 79999999999999 7899999999999999999874
No 488
>2v79_A DNA replication protein DNAD; primosome, DNA-binding protein; HET: DNA; 2.00A {Bacillus subtilis}
Probab=80.98 E-value=1.2 Score=34.00 Aligned_cols=36 Identities=22% Similarity=0.306 Sum_probs=33.0
Q ss_pred CCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 49 KPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 49 ~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
...|.++||+++|+ ++..+.++|+.|...|+++...
T Consensus 50 ~~ps~~~LA~~~~~---s~~~v~~~L~~L~~KGlI~i~~ 85 (135)
T 2v79_A 50 YFPTPNQLQEGMSI---SVEECTNRLRMFIQKGFLFIEE 85 (135)
T ss_dssp CSCCHHHHHTTSSS---CHHHHHHHHHHHHHHTSCEEEE
T ss_pred CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEEEe
Confidence 56899999999999 7899999999999999999853
No 489
>2ek5_A Predicted transcriptional regulators; helix-turn-helix, interwined alpha helices; 2.20A {Corynebacterium glutamicum atcc 13032} PDB: 2du9_A
Probab=80.83 E-value=2.3 Score=32.08 Aligned_cols=50 Identities=14% Similarity=0.218 Sum_probs=39.3
Q ss_pred HHHHHHHhCcccccccCCCCC-CHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 31 SLKCAVELGIPDIINKHGKPM-TLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 31 ~l~~a~~lglfd~L~~~~~~~-t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
.|...+..|-+ .. |..+ |..+||+.+|+ +...+++-|+.|...|+++...
T Consensus 12 ~i~~~I~~g~l---~~-G~~LPse~~La~~~gv---Sr~tVr~Al~~L~~~Gli~~~~ 62 (129)
T 2ek5_A 12 LIEDSIVDGTL---SI-DQRVPSTNELAAFHRI---NPATARNGLTLLVEAGILYKKR 62 (129)
T ss_dssp HHHHHHHTTSS---CT-TSCBCCHHHHHHHTTC---CHHHHHHHHHHHHTTTSEEEET
T ss_pred HHHHHHHhCCC---CC-CCcCcCHHHHHHHHCc---CHHHHHHHHHHHHHCCcEEEec
Confidence 44455555544 22 3566 89999999999 7789999999999999999875
No 490
>1yg2_A Gene activator APHA; virulence factor, winged helix, transcripti factor, transcription; 2.20A {Vibrio cholerae} SCOP: a.4.5.61
Probab=80.82 E-value=1.3 Score=35.38 Aligned_cols=66 Identities=12% Similarity=0.184 Sum_probs=47.0
Q ss_pred HhCcccccccCCCCCCHHHHHHhc--------CCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhch
Q 021867 37 ELGIPDIINKHGKPMTLNELVSAL--------TINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASK 108 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~--------g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~ 108 (306)
++-|+..|.. +|.+.-+|++.+ ++ ++..+++.|+-|...|+++....... +....-.|++|+.++
T Consensus 4 ~~~iL~lL~~--~~~~gyel~~~l~~~~~~~~~~---s~~~ly~~L~~Le~~GlI~~~~~~~~--~~~~r~~Y~lT~~G~ 76 (179)
T 1yg2_A 4 PHVILTVLST--RDATGYDITKEFSASIGYFWKA---SHQQVYRELNKMGEQGLVTCVLEPQE--GKPDRKVYSITQAGR 76 (179)
T ss_dssp HHHHHHHHHH--CCBCHHHHHHHHTTGGGGTCCC---CHHHHHHHHHHHHHTTSEEECCC-----------CEEECHHHH
T ss_pred HHHHHHHHhc--CCCCHHHHHHHHHHHhCCccCC---CcCcHHHHHHHHHHCCCeEEEeecCC--CCCCceEEEeChHHH
Confidence 4446667765 799999999998 45 67899999999999999997642100 000124599999987
Q ss_pred h
Q 021867 109 L 109 (306)
Q Consensus 109 ~ 109 (306)
.
T Consensus 77 ~ 77 (179)
T 1yg2_A 77 S 77 (179)
T ss_dssp H
T ss_pred H
Confidence 3
No 491
>2qlz_A Transcription factor PF0095; 2.50A {Pyrococcus furiosus} PDB: 2quf_A
Probab=80.79 E-value=2.3 Score=35.67 Aligned_cols=44 Identities=16% Similarity=0.059 Sum_probs=37.8
Q ss_pred CcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 39 GIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 39 glfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
-|.-.|.. ++.|+++||+.+|+ ++.-+...|.-|...|++++..
T Consensus 169 ~l~~~l~~--~~~t~~~la~~~~l---~~~~V~~~l~~L~~~~~v~~~~ 212 (232)
T 2qlz_A 169 ILHYLLLN--GRATVEELSDRLNL---KEREVREKISEMARFVPVKIIN 212 (232)
T ss_dssp HHHHHHHS--SEEEHHHHHHHHTC---CHHHHHHHHHHHTTTSCEEEET
T ss_pred HHHHHHhc--CCCCHHHHHHHhCc---CHHHHHHHHHHHHhcCCeEEec
Confidence 34445554 79999999999999 7899999999999999998775
No 492
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=80.63 E-value=2.5 Score=35.12 Aligned_cols=36 Identities=11% Similarity=0.230 Sum_probs=33.4
Q ss_pred CCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 49 KPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 49 ~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
-++|-.+||+.+|+ .+..+.|+|+.|...|+++...
T Consensus 176 ~~~t~~~iA~~lG~---sr~tvsR~l~~L~~~g~I~~~~ 211 (250)
T 3e6c_C 176 MPLSQKSIGEITGV---HHVTVSRVLASLKRENILDKKK 211 (250)
T ss_dssp CCCCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEECS
T ss_pred CCCCHHHHHHHhCC---cHHHHHHHHHHHHHCCCeEeCC
Confidence 47899999999999 6899999999999999999874
No 493
>1hsj_A Fusion protein consisting of staphylococcus accessary regulator protein R and maltose...; novel fold for DNA binding; HET: GLC; 2.30A {Escherichia coli} SCOP: a.4.5.28 c.94.1.1
Probab=79.92 E-value=0.86 Score=42.36 Aligned_cols=67 Identities=9% Similarity=0.100 Sum_probs=48.3
Q ss_pred hCcccccccC-CCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhchhhh
Q 021867 38 LGIPDIINKH-GKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASKLLL 111 (306)
Q Consensus 38 lglfd~L~~~-~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~~l~ 111 (306)
+.|+..|.++ ++++|..|||+.+++ ++..+.|+++-|...|++++....+.| -.-...+|+.++.+.
T Consensus 407 ~~vl~~l~~~~~~~~~~~~l~~~~~~---~~~~~t~~~~~le~~g~v~r~~~~~D~----R~~~i~lT~~g~~~~ 474 (487)
T 1hsj_A 407 IYILNHILRSESNEISSKEIAKCSEF---KPYYLTKALQKLKDLKLLSKKRSLQDE----RTVIVYVTDTQKANI 474 (487)
T ss_dssp HHHHHHHHTCSCSEEEHHHHHHSSCC---CHHHHHHHHHHHHTTTTSCCEECCSSS----SCCEEECCSSHHHHH
T ss_pred HHHHHHHHhCCCCCcCHHHHHHHHCC---CHHHHHHHHHHHHHCCCEeecCCCCCC----CeEEEEECHHHHHHH
Confidence 4466666653 158999999999999 789999999999999999987631100 012366777766443
No 494
>2w48_A Sorbitol operon regulator; SORC, activator, repressor, DNA-binding, transcription, transcription regulator, transcription regulation; 3.20A {Klebsiella pneumoniae}
Probab=78.63 E-value=1.8 Score=37.97 Aligned_cols=36 Identities=19% Similarity=0.256 Sum_probs=33.2
Q ss_pred CCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCcee-eec
Q 021867 49 KPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFA-QQT 87 (306)
Q Consensus 49 ~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~-~~~ 87 (306)
+++|..|||+++|+ ++..++|.|..|...|+++ +..
T Consensus 20 ~~~~~~ela~~l~v---S~~tIrRdL~~l~~~G~v~iri~ 56 (315)
T 2w48_A 20 QDMTQAQIARELGI---YRTTISRLLKRGREQGIVTIAIN 56 (315)
T ss_dssp SCCCHHHHHHHTTC---CHHHHHHHHHHHHHTTSEEEEEC
T ss_pred CCCCHHHHHHHHCc---CHHHHHHHHHHHHHCCcEEEEec
Confidence 67999999999999 7899999999999999998 553
No 495
>3ke2_A Uncharacterized protein YP_928783.1; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.50A {Shewanella amazonensis SB2B}
Probab=78.47 E-value=2.7 Score=30.85 Aligned_cols=52 Identities=13% Similarity=0.145 Sum_probs=39.9
Q ss_pred CCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhc
Q 021867 49 KPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNAS 107 (306)
Q Consensus 49 ~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s 107 (306)
.| |+..|.+.+|+ +.+.++..+.+|...|+-.+-..++.||+ .|.|+++.=+
T Consensus 33 ~~-nvp~L~~~TGm---PRRTiQd~I~aL~elgI~~~FvQ~G~R~n---~GyY~I~dWG 84 (117)
T 3ke2_A 33 RH-NLLSLGKLTGM---PRRTLQDAIASFADIGIEVEFVQDGERHN---AGYYRIRTWG 84 (117)
T ss_dssp CC-CHHHHHHHHCC---CHHHHHHHHHTGGGGTCEEEEECCTTCCS---CCEEEEEECT
T ss_pred CC-CHHHHHHHHCC---CHhHHHHHHHHhhhCCeEEEEEeccccCC---CccEEEeecC
Confidence 44 99999999999 68999999999999999887543333332 5778776533
No 496
>3by6_A Predicted transcriptional regulator; structural genomics, PSI-2, MCSG, structure initiative, midwest center for structural genomic binding; 2.20A {Oenococcus oeni}
Probab=78.14 E-value=3.8 Score=30.67 Aligned_cols=51 Identities=12% Similarity=0.097 Sum_probs=40.0
Q ss_pred HHHHHHHHhCcccccccCCCCC-CHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 30 MSLKCAVELGIPDIINKHGKPM-TLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 30 ~~l~~a~~lglfd~L~~~~~~~-t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
..|...+..|-+ .. |..+ |..+||+.+|+ +...+++-|+.|...|++....
T Consensus 18 ~~l~~~I~~g~~---~~-G~~lPse~~La~~~~v---Sr~tvr~Al~~L~~~Gli~~~~ 69 (126)
T 3by6_A 18 DRIKNEVATDVL---SA-NDQLPSVRETALQEKI---NPNTVAKAYKELEAQKVIRTIP 69 (126)
T ss_dssp HHHHHHHHTTSS---CT-TCEECCHHHHHHHHTC---CHHHHHHHHHHHHHTTSEEEET
T ss_pred HHHHHHHHhCCC---CC-CCcCcCHHHHHHHHCc---CHHHHHHHHHHHHHCCCEEEec
Confidence 344555555554 32 3567 99999999999 7789999999999999999875
No 497
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=77.99 E-value=8.6 Score=33.86 Aligned_cols=94 Identities=14% Similarity=0.158 Sum_probs=58.9
Q ss_pred CCeEEEecCCccHHHHHHHHHCCCCe-EEEecc-hHHHHhchh-cCCCeEEEeccCCC----CCCCccEEEehhhhccCC
Q 021867 197 LNSLVDVGGGIGTVAKAIAKAFPNLE-CTDFDL-PHVVNGLES-DLANLKYVGGDMFE----AIPPADAVLLKWILHDWN 269 (306)
Q Consensus 197 ~~~vlDvGgG~G~~~~~l~~~~p~~~-~~~~Dl-~~~~~~a~~-~~~rv~~~~~d~~~----~~p~~D~~~~~~vlh~~~ 269 (306)
..+++|+-||.|.+...+.++. .+ +..+|. +..++..+. ..+.. .+|+.+ ..+.+|+++..-....|+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG--~~~v~~~e~d~~a~~t~~~N~~~~~---~~Di~~~~~~~~~~~D~l~~gpPCQ~fS 85 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCG--AECVYSNEWDKYAQEVYEMNFGEKP---EGDITQVNEKTIPDHDILCAGFPCQAFS 85 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT--CEEEEEECCCHHHHHHHHHHHSCCC---BSCGGGSCGGGSCCCSEEEEECCCTTTC
T ss_pred CCcEEEECCCcCHHHHHHHHCC--CeEEEEEeCCHHHHHHHHHHcCCCC---cCCHHHcCHhhCCCCCEEEECCCCCCcc
Confidence 3689999999999999998864 44 566788 555554443 11111 577765 245789999886665553
Q ss_pred c--------hHHHHHH---HHHHHhcCCCCCCcEEEEEeeec
Q 021867 270 D--------EECVKIL---KKCKEAVTSDDKKGKVIIIDMIR 300 (306)
Q Consensus 270 d--------~~~~~iL---~~~~~~L~p~~~gg~lli~e~~~ 300 (306)
. +..-.++ -++.+.++| +++++|.|.
T Consensus 86 ~ag~~~g~~d~r~~L~~~~~r~i~~~~P-----~~~~~ENV~ 122 (327)
T 2c7p_A 86 ISGKQKGFEDSRGTLFFDIARIVREKKP-----KVVFMENVK 122 (327)
T ss_dssp TTSCCCGGGSTTSCHHHHHHHHHHHHCC-----SEEEEEEEG
T ss_pred hhcccCCCcchhhHHHHHHHHHHHhccC-----cEEEEeCcH
Confidence 1 1111122 233344577 688888774
No 498
>2yu3_A DNA-directed RNA polymerase III 39 kDa polypeptide F variant; winged helix domain, RNA polymerase III C39 subunit, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.67 E-value=1 Score=32.21 Aligned_cols=48 Identities=13% Similarity=0.136 Sum_probs=39.2
Q ss_pred HhCcccccccCC-CCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 37 ELGIPDIINKHG-KPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 37 ~lglfd~L~~~~-~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
+.-|+.+|..+| .+++..+|+.++++ +...+.++|+.|...|++....
T Consensus 39 E~lVy~~I~~aGn~GIw~kdL~~~tnL---~~~~vtkiLK~LE~k~lIK~Vk 87 (95)
T 2yu3_A 39 EKLVYQIIEDAGNKGIWSRDVRYKSNL---PLTEINKILKNLESKKLIKAVK 87 (95)
T ss_dssp HHHHHHHHHHHTTSCEEHHHHHHHHTC---CHHHHHHHHHHHHHHTSEEEEC
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHHhCC---CHHHHHHHHHHHHhCCCEEEec
Confidence 334555555432 67999999999999 6899999999999999999875
No 499
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Probab=77.47 E-value=1.4 Score=39.87 Aligned_cols=46 Identities=15% Similarity=0.266 Sum_probs=40.1
Q ss_pred HhCcccccccCCCCCCHHHHHHhcCCCCCCcchHHHHHHHHHHcCceeeec
Q 021867 37 ELGIPDIINKHGKPMTLNELVSALTINPSKTRCVYRLMRILIHSGFFAQQT 87 (306)
Q Consensus 37 ~lglfd~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~g~l~~~~ 87 (306)
+..|++.|.. +|.++++|++++|+ +...+...|-.|.-.|++....
T Consensus 330 ~~~vl~~l~~--~~~~~D~l~~~~gl---~~~~v~~~L~~LEl~G~v~~~~ 375 (382)
T 3maj_A 330 RTRILALLGP--SPVGIDDLIRLSGI---SPAVVRTILLELELAGRLERHG 375 (382)
T ss_dssp HHHHHHHCCS--SCEEHHHHHHHHCC---CHHHHHHHHHHHHHTTCCEECT
T ss_pred HHHHHHhhCC--CCCCHHHHHHHHCc---CHHHHHHHHHHHHhCCcEEeCC
Confidence 3457888875 79999999999999 6788999999999999999886
No 500
>3hhh_A Transcriptional regulator, PADR family; PF03551, structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.70A {Enterococcus faecalis} SCOP: a.4.5.0
Probab=77.11 E-value=2.1 Score=31.64 Aligned_cols=69 Identities=19% Similarity=0.170 Sum_probs=48.2
Q ss_pred HHHhCcccccccCCCCCCHHHHHHhc------CCCCCCcchHHHHHHHHHHcCceeeecccCCCCCCCCCCceecChhch
Q 021867 35 AVELGIPDIINKHGKPMTLNELVSAL------TINPSKTRCVYRLMRILIHSGFFAQQTLNSSRNNNDEEQGYVLKNASK 108 (306)
Q Consensus 35 a~~lglfd~L~~~~~~~t~~eLA~~~------g~~~~~~~~l~rlLr~L~~~g~l~~~~~~~~~~~~~~~~~y~~t~~s~ 108 (306)
.+++=|+.+|.. +|.+.-+|++.+ ++ ++..++.+|+-|...|+++....... ++...-.|++|+.++
T Consensus 13 ~l~~~IL~lL~~--~p~~Gyei~~~l~~~g~~~i---s~gtlY~~L~rLe~~GlI~~~~~~~~--~g~~rk~Y~lT~~G~ 85 (116)
T 3hhh_A 13 ILEGLVLAIIQR--KETYGYEITKILNDQGFTEI---VEGTVYTILLRLEKNQWVIAEKKPSE--KGPMRKFYRLTSSGE 85 (116)
T ss_dssp HHHHHHHHHHHH--SCBCHHHHHHHHHTTSCSSC---CHHHHHHHHHHHHHTTSEEEEEEECC----CEEEEEEECHHHH
T ss_pred hHHHHHHHHHhc--CCCCHHHHHHHHHHcCCCCC---CccHHHHHHHHHHHCCCEEEEeeecC--CCCCceEEEECHHHH
Confidence 344445566665 799999999998 45 78999999999999999997642000 000123499999987
Q ss_pred hh
Q 021867 109 LL 110 (306)
Q Consensus 109 ~l 110 (306)
..
T Consensus 86 ~~ 87 (116)
T 3hhh_A 86 AE 87 (116)
T ss_dssp HH
T ss_pred HH
Confidence 43
Done!