Your job contains 1 sequence.
>021869
MATTASATRATLSSLSSLSLSLSLHSTPRLSFLSTAKLTRLPKLTLSTVLVRASESDKPN
GIVFDDFNNPDEDAAVFDPPTPPEDYTPPPSFDELPMETEDEIAAAYEELYGPAYAGVSV
LGNDVYVMDSKAKKTSAFGKTKKEKVKDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGD
KKGQVGVGVAKAKEVIAAVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPAS
PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIP
MEELWK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021869
(306 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2057645 - symbol:EMB3113 "EMBRYO DEFECTIVE 311... 711 3.3e-70 1
TIGR_CMR|BA_0127 - symbol:BA_0127 "ribosomal protein S5" ... 253 1.1e-21 1
TIGR_CMR|CHY_2292 - symbol:CHY_2292 "ribosomal protein S5... 246 6.3e-21 1
UNIPROTKB|P66574 - symbol:rpsE "30S ribosomal protein S5"... 235 9.2e-20 1
TIGR_CMR|SO_0248 - symbol:SO_0248 "ribosomal protein S5" ... 218 5.8e-18 1
TIGR_CMR|CPS_0618 - symbol:CPS_0618 "ribosomal protein S5... 216 9.5e-18 1
TIGR_CMR|GSU_2840 - symbol:GSU_2840 "ribosomal protein S5... 212 2.5e-17 1
UNIPROTKB|Q9KP01 - symbol:rpsE "30S ribosomal protein S5"... 208 6.7e-17 1
TIGR_CMR|VC_2579 - symbol:VC_2579 "ribosomal protein S5" ... 208 6.7e-17 1
UNIPROTKB|P0A7W1 - symbol:rpsE "30S ribosomal subunit pro... 206 1.1e-16 1
TIGR_CMR|CBU_0255 - symbol:CBU_0255 "ribosomal protein S5... 199 6.0e-16 1
TIGR_CMR|CJE_1858 - symbol:CJE_1858 "ribosomal protein S5... 196 1.3e-15 1
TIGR_CMR|SPO_0502 - symbol:SPO_0502 "ribosomal protein S5... 191 4.2e-15 1
TIGR_CMR|DET_0491 - symbol:DET_0491 "ribosomal protein S5... 190 5.4e-15 1
TIGR_CMR|ECH_0426 - symbol:ECH_0426 "ribosomal protein S5... 175 2.1e-13 1
TIGR_CMR|APH_0297 - symbol:APH_0297 "ribosomal protein S5... 157 1.7e-11 1
TIGR_CMR|NSE_0283 - symbol:NSE_0283 "ribosomal protein S5... 125 1.3e-07 1
UNIPROTKB|G4MPT3 - symbol:MGG_16248 "30S ribosomal protei... 113 0.00018 1
ASPGD|ASPL0000036430 - symbol:AN3413 species:162425 "Emer... 111 0.00029 1
FB|FBgn0004867 - symbol:RpS2 "Ribosomal protein S2" speci... 111 0.00031 1
SGD|S000000455 - symbol:MRPS5 "Mitochondrial ribosomal pr... 111 0.00042 1
>TAIR|locus:2057645 [details] [associations]
symbol:EMB3113 "EMBRYO DEFECTIVE 3113" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=ISS] [GO:0005840 "ribosome"
evidence=ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0009409
"response to cold" evidence=IEP;RCA] [GO:0009535 "chloroplast
thylakoid membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0016020 "membrane" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0042742 "defense response to
bacterium" evidence=RCA] [GO:0045036 "protein targeting to
chloroplast" evidence=RCA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005712 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0005634 GO:GO:0046686
GO:GO:0009570 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006412
GO:GO:0009409 Gene3D:3.30.160.20 GO:GO:0003735 GO:GO:0009535
GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:U78721 KO:K02988
GO:GO:0015935 EMBL:AY093289 EMBL:AY054523 EMBL:AY087734
IPI:IPI00526383 PIR:G84749 RefSeq:NP_180936.1 UniGene:At.24873
HSSP:Q5SHQ5 ProteinModelPortal:P93014 SMR:P93014 STRING:P93014
World-2DPAGE:0003:P93014 PaxDb:P93014 PRIDE:P93014 ProMEX:P93014
EnsemblPlants:AT2G33800.1 GeneID:817947 KEGG:ath:AT2G33800
GeneFarm:35 TAIR:At2g33800 eggNOG:COG0098 HOGENOM:HOG000072595
InParanoid:P93014 OMA:NARATIK PhylomeDB:P93014
ProtClustDB:CLSN2683512 Genevestigator:P93014 GermOnline:AT2G33800
InterPro:IPR018192 PANTHER:PTHR13718 TIGRFAMs:TIGR01021
PROSITE:PS00585 Uniprot:P93014
Length = 303
Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 155/262 (59%), Positives = 178/262 (67%)
Query: 47 STVLVRASESDKPNGIVFDDFNNPDEDA-AVFXXXXXXXXXXXXXSFDELPMETEDEIAA 105
S LV+AS +D I F+D P+ A VF FDE ETE+EIA
Sbjct: 44 SLTLVKASSTDTET-IFFED-ETPEITANVVFDPPIAPEGFVSPPYFDEGSDETEEEIAT 101
Query: 106 AYEELYGPAYAGVSVLGNDVYVMDSKAKKTSAFG-KTKKEKVKDGFEEXXXXXXXXXXXX 164
A+EELYGPAY+G S+LG D+YVMDSK KK+S G K KK+K++DGFEE
Sbjct: 102 AFEELYGPAYSGESMLGKDIYVMDSKHKKSSGIGGKPKKDKIRDGFEERVVQVRRVTKVV 161
Query: 165 XXXXXLKFRAIXXXXXXXXXXXXXXXXXXXXXXXXQKSAVDARRNIVTVPMTKYLTFPHR 224
LKFRAI QKSA+DARRNIV VPMTKY TFPHR
Sbjct: 162 KGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIVQVPMTKYSTFPHR 221
Query: 225 SDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAV 284
S+GD+GAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARAT+ AV
Sbjct: 222 SEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATLAAV 281
Query: 285 QKMKQWREVSRERGIPMEELWK 306
Q+M+Q+R+V++ERGIPMEELWK
Sbjct: 282 QQMRQFRDVAQERGIPMEELWK 303
>TIGR_CMR|BA_0127 [details] [associations]
symbol:BA_0127 "ribosomal protein S5" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 KO:K02988 GO:GO:0015935
eggNOG:COG0098 HOGENOM:HOG000072595 InterPro:IPR018192
PANTHER:PTHR13718 TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT
ProtClustDB:PRK00550 HAMAP:MF_01307_B RefSeq:NP_842695.1
RefSeq:YP_016732.1 RefSeq:YP_026413.1 ProteinModelPortal:Q81VR3
SMR:Q81VR3 DNASU:1083790 EnsemblBacteria:EBBACT00000013084
EnsemblBacteria:EBBACT00000016262 EnsemblBacteria:EBBACT00000019813
GeneID:1083790 GeneID:2814389 GeneID:2850890 KEGG:ban:BA_0127
KEGG:bar:GBAA_0127 KEGG:bat:BAS0127
BioCyc:BANT260799:GJAJ-138-MONOMER
BioCyc:BANT261594:GJ7F-140-MONOMER Uniprot:Q81VR3
Length = 166
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 51/105 (48%), Positives = 74/105 (70%)
Query: 200 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAG 259
+K+ DA++N++ VP+ T PH +G FGA +V L+PA+ GTGVIAGG VR VLE+AG
Sbjct: 61 RKAIEDAKKNLIAVPLVG-TTIPHTINGHFGAGEVFLKPAAEGTGVIAGGPVRAVLELAG 119
Query: 260 VENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEEL 304
V++ L K LGSN +N RATV + ++K+ +V++ RG +EEL
Sbjct: 120 VQDILSKSLGSNTPINMIRATVNGLSELKRAEDVAKLRGKSVEEL 164
>TIGR_CMR|CHY_2292 [details] [associations]
symbol:CHY_2292 "ribosomal protein S5" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005712 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 KO:K02988 GO:GO:0015935
eggNOG:COG0098 HOGENOM:HOG000072595 InterPro:IPR018192
PANTHER:PTHR13718 TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT
ProtClustDB:PRK00550 HAMAP:MF_01307_B RefSeq:YP_361101.1
ProteinModelPortal:Q3A9T3 SMR:Q3A9T3 STRING:Q3A9T3 GeneID:3727429
KEGG:chy:CHY_2292 PATRIC:21277655
BioCyc:CHYD246194:GJCN-2291-MONOMER Uniprot:Q3A9T3
Length = 167
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 52/107 (48%), Positives = 71/107 (66%)
Query: 200 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAG 259
+K DA++N++ VP+ T PH G+ GA KV+L+PA+PGTGVIAG AVR +LEMAG
Sbjct: 61 RKGIEDAKKNLIKVPIVN-TTIPHEIIGEAGAGKVLLKPAAPGTGVIAGSAVRAILEMAG 119
Query: 260 VENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEELWK 306
V + L K LGSNN N A AT+ A++ +K V++ RG E+ K
Sbjct: 120 VRDILTKSLGSNNPHNMAHATIEALKSLKTVEMVAKLRGKTPAEILK 166
>UNIPROTKB|P66574 [details] [associations]
symbol:rpsE "30S ribosomal protein S5" species:1773
"Mycobacterium tuberculosis" [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005712 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0005829 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006412 Gene3D:3.30.160.20
EMBL:BX842574 GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 KO:K02988
GO:GO:0015935 eggNOG:COG0098 HOGENOM:HOG000072595
InterPro:IPR018192 PANTHER:PTHR13718 TIGRFAMs:TIGR01021
PROSITE:PS00585 ProtClustDB:PRK00550 HAMAP:MF_01307_B PIR:D70644
RefSeq:NP_215235.1 RefSeq:NP_335166.1 RefSeq:YP_006514065.1
ProteinModelPortal:P66574 SMR:P66574 PRIDE:P66574
EnsemblBacteria:EBMYCT00000001380 EnsemblBacteria:EBMYCT00000069406
GeneID:13318610 GeneID:888465 GeneID:926039 KEGG:mtc:MT0746
KEGG:mtu:Rv0721 KEGG:mtv:RVBD_0721 PATRIC:18123375
TubercuList:Rv0721 OMA:QNEGREG Uniprot:P66574
Length = 220
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 50/104 (48%), Positives = 69/104 (66%)
Query: 201 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGV 260
K +AR++ VP+ T H G+ A V+LRPASPGTGVIAGGA R VLE AGV
Sbjct: 93 KGVEEARKSFFRVPLIGG-TITHPVQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGV 151
Query: 261 ENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEEL 304
+ L K LGS+NA+N ATV A++ +++ EV+ RG+P+E++
Sbjct: 152 HDILAKSLGSDNAINVVHATVAALKLLQRPEEVAARRGLPIEDV 195
>TIGR_CMR|SO_0248 [details] [associations]
symbol:SO_0248 "ribosomal protein S5" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT ProtClustDB:PRK00550
HAMAP:MF_01307_B RefSeq:NP_715888.1 ProteinModelPortal:P59124
SMR:P59124 GeneID:1168131 KEGG:son:SO_0248 PATRIC:23520189
Uniprot:P59124
Length = 167
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 48/105 (45%), Positives = 68/105 (64%)
Query: 200 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAG 259
QK+ ARRN+VTV + T H G ++V ++PAS GTG+IAGGA+R VLE+AG
Sbjct: 62 QKAMEKARRNMVTVELNAG-TLHHPVKGRHTGSRVYMQPASQGTGIIAGGAMRAVLEVAG 120
Query: 260 VENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEEL 304
V N L K GS N +N RATV A+ MK +++ +RG+ ++E+
Sbjct: 121 VHNVLSKAYGSTNPINIVRATVDALVHMKSPSQIAAKRGLNVDEI 165
>TIGR_CMR|CPS_0618 [details] [associations]
symbol:CPS_0618 "ribosomal protein S5" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT HAMAP:MF_01307_B
RefSeq:YP_267368.1 ProteinModelPortal:Q488Z6 SMR:Q488Z6
STRING:Q488Z6 PRIDE:Q488Z6 GeneID:3519484 KEGG:cps:CPS_0618
PATRIC:21464563 BioCyc:CPSY167879:GI48-705-MONOMER Uniprot:Q488Z6
Length = 169
Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 48/105 (45%), Positives = 66/105 (62%)
Query: 200 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAG 259
QK+ A RNIVT+ + K T H G +KV ++PAS GTG+IAGGA+R VLE+AG
Sbjct: 64 QKAMEKAHRNIVTIDL-KGTTLQHVITGKHSGSKVFMKPASEGTGIIAGGAMRAVLEVAG 122
Query: 260 VENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEEL 304
V+N L K GS N +N RATV A+ M ++ +RG ++E+
Sbjct: 123 VQNVLSKAYGSTNPINVVRATVSALVNMHSPEGMAAKRGKRVDEI 167
>TIGR_CMR|GSU_2840 [details] [associations]
symbol:GSU_2840 "ribosomal protein S5" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005712 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 ProtClustDB:PRK00550
HAMAP:MF_01307_B OMA:YNASKIL RefSeq:NP_953883.1
ProteinModelPortal:Q749A4 SMR:Q749A4 GeneID:2686827
KEGG:gsu:GSU2840 PATRIC:22028527
BioCyc:GSUL243231:GH27-2799-MONOMER Uniprot:Q749A4
Length = 162
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 42/100 (42%), Positives = 62/100 (62%)
Query: 200 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAG 259
+K A++N++ VP+ + T P+ G FGA +V+++PAS GTGVIAGGA R V E AG
Sbjct: 61 RKGVEQAKKNLIKVPIVEGHTIPYEVLGHFGAGRVLIKPASAGTGVIAGGAARAVFEAAG 120
Query: 260 VENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 299
+ N L K LGSNN N +A + +++ E+ RG+
Sbjct: 121 LHNVLSKCLGSNNPHNVVKAAFNGLAQLRSPEEIMARRGV 160
>UNIPROTKB|Q9KP01 [details] [associations]
symbol:rpsE "30S ribosomal protein S5" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005712 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR Gene3D:3.30.160.20 GO:GO:0003735
GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 KO:K02988 GO:GO:0015935
eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT ProtClustDB:PRK00550
HAMAP:MF_01307_B PIR:E82057 RefSeq:NP_232207.1
ProteinModelPortal:Q9KP01 SMR:Q9KP01 PRIDE:Q9KP01 DNASU:2615596
GeneID:2615596 KEGG:vch:VC2579 PATRIC:20084184 Uniprot:Q9KP01
Length = 167
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 46/105 (43%), Positives = 67/105 (63%)
Query: 200 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAG 259
QK+ ARR++VT+ + + T H G +KV ++PA+ GTGVIAGGA+R VLE+AG
Sbjct: 62 QKAMEKARRSMVTIALNEG-TLHHPVKGRHSGSKVYMQPAAEGTGVIAGGAMRAVLEVAG 120
Query: 260 VENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEEL 304
V N L K GS N +N RAT+ A+ +K V+ +RG+ +E +
Sbjct: 121 VHNVLSKAYGSTNPINIVRATIDALVDVKSPEMVAAKRGLTVEAI 165
>TIGR_CMR|VC_2579 [details] [associations]
symbol:VC_2579 "ribosomal protein S5" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR Gene3D:3.30.160.20 GO:GO:0003735
GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 KO:K02988 GO:GO:0015935
eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT ProtClustDB:PRK00550
HAMAP:MF_01307_B PIR:E82057 RefSeq:NP_232207.1
ProteinModelPortal:Q9KP01 SMR:Q9KP01 PRIDE:Q9KP01 DNASU:2615596
GeneID:2615596 KEGG:vch:VC2579 PATRIC:20084184 Uniprot:Q9KP01
Length = 167
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 46/105 (43%), Positives = 67/105 (63%)
Query: 200 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAG 259
QK+ ARR++VT+ + + T H G +KV ++PA+ GTGVIAGGA+R VLE+AG
Sbjct: 62 QKAMEKARRSMVTIALNEG-TLHHPVKGRHSGSKVYMQPAAEGTGVIAGGAMRAVLEVAG 120
Query: 260 VENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEEL 304
V N L K GS N +N RAT+ A+ +K V+ +RG+ +E +
Sbjct: 121 VHNVLSKAYGSTNPINIVRATIDALVDVKSPEMVAAKRGLTVEAI 165
>UNIPROTKB|P0A7W1 [details] [associations]
symbol:rpsE "30S ribosomal subunit protein S5"
species:83333 "Escherichia coli K-12" [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0046677 "response to
antibiotic" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 EMBL:X01563 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006412
Gene3D:3.30.160.20 GO:GO:0046677 EMBL:U18997 GO:GO:0003735
GO:GO:0019843 PDB:3J00 PDBsum:3J00 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 PDB:3FIH
PDB:3IZV PDB:3IZW PDBsum:3FIH PDBsum:3IZV PDBsum:3IZW KO:K02988
GO:GO:0015935 PDB:3SFS PDB:3UOQ PDBsum:3SFS PDBsum:3UOQ PDB:1EG0
PDBsum:1EG0 eggNOG:COG0098 HOGENOM:HOG000072595 InterPro:IPR018192
PANTHER:PTHR13718 TIGRFAMs:TIGR01021 PROSITE:PS00585 PDB:4GAS
PDB:4GD1 PDBsum:4GAS PDBsum:4GD1 PDB:1M5G PDB:1P6G PDB:1P87
PDB:1VS5 PDB:1VS7 PDB:2AVY PDB:2AW7 PDB:2GY9 PDB:2GYB PDB:2I2P
PDB:2I2U PDB:2QAL PDB:2QAN PDB:2QB9 PDB:2QBB PDB:2QBD PDB:2QBF
PDB:2QBH PDB:2QBJ PDB:2QOU PDB:2QOW PDB:2QOY PDB:2QP0 PDB:2VHO
PDB:2VHP PDB:2WWL PDB:2Z4K PDB:2Z4M PDB:3DF1 PDB:3DF3 PDB:3E1A
PDB:3E1C PDB:3I1M PDB:3I1O PDB:3I1Q PDB:3I1S PDB:3I1Z PDB:3I21
PDB:3J0U PDB:3J0V PDB:3J0X PDB:3J0Z PDB:3J10 PDB:3J13 PDB:3J18
PDB:3KC4 PDB:3OAQ PDB:3OAR PDB:3OFA PDB:3OFB PDB:3OFO PDB:3OFP
PDB:3OFX PDB:3OFY PDB:3OR9 PDB:3ORA PDB:4A2I PDB:4ADV PDB:4GAQ
PDB:4GD2 PDBsum:1M5G PDBsum:1P6G PDBsum:1P87 PDBsum:1VS5
PDBsum:1VS7 PDBsum:2AVY PDBsum:2AW7 PDBsum:2GY9 PDBsum:2GYB
PDBsum:2I2P PDBsum:2I2U PDBsum:2QAL PDBsum:2QAN PDBsum:2QB9
PDBsum:2QBB PDBsum:2QBD PDBsum:2QBF PDBsum:2QBH PDBsum:2QBJ
PDBsum:2QOU PDBsum:2QOW PDBsum:2QOY PDBsum:2QP0 PDBsum:2VHO
PDBsum:2VHP PDBsum:2WWL PDBsum:2Z4K PDBsum:2Z4M PDBsum:3DF1
PDBsum:3DF3 PDBsum:3E1A PDBsum:3E1C PDBsum:3I1M PDBsum:3I1O
PDBsum:3I1Q PDBsum:3I1S PDBsum:3I1Z PDBsum:3I21 PDBsum:3J0U
PDBsum:3J0V PDBsum:3J0X PDBsum:3J0Z PDBsum:3J10 PDBsum:3J13
PDBsum:3J18 PDBsum:3KC4 PDBsum:3OAQ PDBsum:3OAR PDBsum:3OFA
PDBsum:3OFB PDBsum:3OFO PDBsum:3OFP PDBsum:3OFX PDBsum:3OFY
PDBsum:3OR9 PDBsum:3ORA PDBsum:4A2I PDBsum:4ADV PDBsum:4GAQ
PDBsum:4GD2 OMA:HNVVKAT ProtClustDB:PRK00550 HAMAP:MF_01307_B
PIR:B65123 RefSeq:NP_417762.1 RefSeq:YP_492129.1
ProteinModelPortal:P0A7W1 SMR:P0A7W1 IntAct:P0A7W1 PaxDb:P0A7W1
PRIDE:P0A7W1 EnsemblBacteria:EBESCT00000004415
EnsemblBacteria:EBESCT00000014509 GeneID:12934414 GeneID:947795
KEGG:ecj:Y75_p3873 KEGG:eco:b3303 PATRIC:32122038 EchoBASE:EB0897
EcoGene:EG10904 BioCyc:EcoCyc:EG10904-MONOMER
BioCyc:ECOL316407:JW3265-MONOMER EvolutionaryTrace:P0A7W1
Genevestigator:P0A7W1 Uniprot:P0A7W1
Length = 167
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 45/105 (42%), Positives = 64/105 (60%)
Query: 200 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAG 259
QK+ ARRN++ V + T H G ++V ++PAS GTG+IAGGA+R VLE+AG
Sbjct: 61 QKAMEKARRNMINVALNNG-TLQHPVKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAG 119
Query: 260 VENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEEL 304
V N L K GS N +N RAT+ ++ M V+ +RG +EE+
Sbjct: 120 VHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKSVEEI 164
>TIGR_CMR|CBU_0255 [details] [associations]
symbol:CBU_0255 "ribosomal protein S5" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT ProtClustDB:PRK00550
HAMAP:MF_01307_B RefSeq:NP_819299.1 ProteinModelPortal:Q83EQ9
SMR:Q83EQ9 PRIDE:Q83EQ9 GeneID:1208136 KEGG:cbu:CBU_0255
PATRIC:17929203 BioCyc:CBUR227377:GJ7S-261-MONOMER Uniprot:Q83EQ9
Length = 168
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 42/105 (40%), Positives = 67/105 (63%)
Query: 200 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAG 259
QK+ +ARRN+++VP+ T H ++ V++ PAS GTGVIAG A+R + E+ G
Sbjct: 63 QKATENARRNMISVPLYG-ATLHHAIKATHASSTVLMLPASEGTGVIAGNAMRAIFEVMG 121
Query: 260 VENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEEL 304
V+N L K +GS+N +N RAT +++M+ V+ +RG +EE+
Sbjct: 122 VQNVLAKCIGSSNPINVVRATFKGLKQMETPESVAAKRGKAIEEI 166
>TIGR_CMR|CJE_1858 [details] [associations]
symbol:CJE_1858 "ribosomal protein S5" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0006450 "regulation of translational fidelity" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005712 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 ProtClustDB:PRK00550
HAMAP:MF_01307_B RefSeq:YP_179828.1 ProteinModelPortal:Q5HSA7
SMR:Q5HSA7 STRING:Q5HSA7 GeneID:3232485 KEGG:cjr:CJE1858
PATRIC:20045548 OMA:YNASKIL BioCyc:CJEJ195099:GJC0-1897-MONOMER
Uniprot:Q5HSA7
Length = 147
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 41/89 (46%), Positives = 62/89 (69%)
Query: 200 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAG 259
+K+ DA +NIV V TK T H + + A++++L+PAS GTGVIAGG+ R ++E+AG
Sbjct: 59 RKAVDDAFKNIVEVK-TKGSTIAHDVEVKYNASRILLKPASEGTGVIAGGSTRPIVELAG 117
Query: 260 VENALGKQLGSNNALNNARATVVAVQKMK 288
+++ L K LGSNN+ N RAT+ A+ +K
Sbjct: 118 IKDILTKSLGSNNSANVVRATIKALTMLK 146
>TIGR_CMR|SPO_0502 [details] [associations]
symbol:SPO_0502 "ribosomal protein S5" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT ProtClustDB:PRK00550
HAMAP:MF_01307_B RefSeq:YP_165764.1 ProteinModelPortal:Q5LW41
SMR:Q5LW41 GeneID:3195459 KEGG:sil:SPO0502 PATRIC:23374265
Uniprot:Q5LW41
Length = 190
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 40/99 (40%), Positives = 61/99 (61%)
Query: 200 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAG 259
+K+ A+R ++ V + + T H +G GA KV++R A GTG+IAGG +R V EM G
Sbjct: 71 RKATEQAKRQMIRVQLREGRTLHHDIEGRHGAGKVVMRAAPEGTGIIAGGPMRAVFEMLG 130
Query: 260 VENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 298
V++ + K LGS N N RAT+ ++K + R V++ RG
Sbjct: 131 VKDVVSKSLGSANPYNMIRATIDGLKKEQSPRSVAQRRG 169
>TIGR_CMR|DET_0491 [details] [associations]
symbol:DET_0491 "ribosomal protein S5" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003735
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 PANTHER:PTHR13718 TIGRFAMs:TIGR01021
PROSITE:PS00585 OMA:HNVVKAT ProtClustDB:PRK00550 HAMAP:MF_01307_B
RefSeq:YP_181235.1 ProteinModelPortal:Q3Z964 STRING:Q3Z964
GeneID:3230239 KEGG:det:DET0491 PATRIC:21608051
BioCyc:DETH243164:GJNF-491-MONOMER Uniprot:Q3Z964
Length = 172
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 41/104 (39%), Positives = 67/104 (64%)
Query: 201 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGV 260
K++ +A+RN+ + + T PH +GAA+V+L+PA+PGTG+IAGG+VR VLE G+
Sbjct: 66 KASANAKRNLSRI-LLNGTTVPHEIVFKYGAAQVLLKPAAPGTGIIAGGSVRAVLESTGI 124
Query: 261 ENALGKQLGSNNALNNARATVVAVQKMKQWRE-VSRERGIPMEE 303
++ L K +G +N N A+AT+ + M+ + V++ R EE
Sbjct: 125 KDILTKSMGCSNKANVAKATLGGLTAMRDPKTTVTKRRSSLKEE 168
>TIGR_CMR|ECH_0426 [details] [associations]
symbol:ECH_0426 "ribosomal protein S5" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005712 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 KO:K02988 GO:GO:0015935
eggNOG:COG0098 HOGENOM:HOG000072595 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT ProtClustDB:PRK00550
HAMAP:MF_01307_B RefSeq:YP_507244.1 ProteinModelPortal:Q2GH39
STRING:Q2GH39 GeneID:3927382 KEGG:ech:ECH_0426 PATRIC:20576329
BioCyc:ECHA205920:GJNR-427-MONOMER Uniprot:Q2GH39
Length = 174
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 36/97 (37%), Positives = 60/97 (61%)
Query: 201 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGV 260
K+ AR+N++ V + + T H F ++KVMLR A GTG+IAGG++R++ E+ GV
Sbjct: 67 KAVNAARKNMIRVHLRESRTLHHDVKAKFCSSKVMLRSAKVGTGIIAGGSIRLIFEVLGV 126
Query: 261 ENALGKQLGSNNALNNARATVVAVQKMKQWREVSRER 297
++ + K +GS+N N A A +KM ++V+ +R
Sbjct: 127 QDVVAKSIGSSNPHNVVYAVFAAFRKMLSPKQVANKR 163
>TIGR_CMR|APH_0297 [details] [associations]
symbol:APH_0297 "ribosomal protein S5" species:212042
"Anaplasma phagocytophilum HZ" [GO:0000312 "plastid small ribosomal
subunit" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003735
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 PANTHER:PTHR13718 TIGRFAMs:TIGR01021
PROSITE:PS00585 RefSeq:YP_504909.1 ProteinModelPortal:Q2GL42
SMR:Q2GL42 STRING:Q2GL42 GeneID:3931147 KEGG:aph:APH_0297
PATRIC:20949168 OMA:HNVVKAT ProtClustDB:PRK00550
BioCyc:APHA212042:GHPM-327-MONOMER HAMAP:MF_01307_B Uniprot:Q2GL42
Length = 173
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 36/98 (36%), Positives = 59/98 (60%)
Query: 201 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGV 260
K+ A++N++ V + + T H F A++V+LR A GTG+IAGG+VR V E+ GV
Sbjct: 67 KAVNAAKKNMIRVYLRESRTLHHDVTAKFCASRVILRSAKVGTGIIAGGSVRAVFEVLGV 126
Query: 261 ENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 298
++ + K +GS+NA A A + M ++V+ +RG
Sbjct: 127 QDVVAKIVGSSNAHTVIYAVFSAFKSMLSPKQVAGKRG 164
>TIGR_CMR|NSE_0283 [details] [associations]
symbol:NSE_0283 "ribosomal protein S5" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005712 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:CP000237
GenomeReviews:CP000237_GR KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 ProtClustDB:PRK00550
HAMAP:MF_01307_B OMA:YNASKIL RefSeq:YP_506174.1
ProteinModelPortal:Q2GEC2 STRING:Q2GEC2 GeneID:3931470
KEGG:nse:NSE_0283 PATRIC:22680659
BioCyc:NSEN222891:GHFU-310-MONOMER Uniprot:Q2GEC2
Length = 172
Score = 125 (49.1 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 25/73 (34%), Positives = 42/73 (57%)
Query: 201 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGV 260
K+ A+ ++ P+ + T H GA+K+ ++PA GTG++AGGA+R EM GV
Sbjct: 62 KAVRKAKGAMIRFPLREGRTIHHDCFSKLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGV 121
Query: 261 ENALGKQLGSNNA 273
+ + K GS+ +
Sbjct: 122 SDIIAKSYGSSTS 134
>UNIPROTKB|G4MPT3 [details] [associations]
symbol:MGG_16248 "30S ribosomal protein S5" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0003735 EMBL:CM001231 GO:GO:0043581
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 InterPro:IPR018192 PANTHER:PTHR13718
PROSITE:PS00585 TIGRFAMs:TIGR01020 RefSeq:XP_003709842.1
ProteinModelPortal:G4MPT3 SMR:G4MPT3 EnsemblFungi:MGG_16248T0
GeneID:12985269 KEGG:mgr:MGG_16248 Uniprot:G4MPT3
Length = 265
Score = 113 (44.8 bits), Expect = 0.00018, P = 0.00018
Identities = 34/109 (31%), Positives = 50/109 (45%)
Query: 202 SAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVE 261
S + RR + + P + G G+ V L PA GT ++A AV+ +L++AG+E
Sbjct: 147 SVIPVRRGYWGTNLGTPHSLPVKESGKCGSVTVRLIPAPRGTALVASPAVKRLLQLAGIE 206
Query: 262 NALGKQLGSNNALNNA-RATVVAVQKM------KQWREVSRERGIPMEE 303
+A GS L N +AT AV W+E R P+EE
Sbjct: 207 DAYTSSSGSTKTLENTLKATFSAVSNTYGFLTPNLWKETKLIRS-PLEE 254
>ASPGD|ASPL0000036430 [details] [associations]
symbol:AN3413 species:162425 "Emericella nidulans"
[GO:0006407 "rRNA export from nucleus" evidence=IEA] [GO:0045903
"positive regulation of translational fidelity" evidence=IEA]
[GO:0070181 "SSU rRNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
EMBL:BN001306 GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
EMBL:AACD01000055 GO:GO:0015935 eggNOG:COG0098 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 HOGENOM:HOG000072596 KO:K02981
TIGRFAMs:TIGR01020 OMA:DSEGHIG OrthoDB:EOG4T1MWN RefSeq:XP_661017.1
ProteinModelPortal:Q5B7R7 SMR:Q5B7R7 STRING:Q5B7R7
EnsemblFungi:CADANIAT00009625 GeneID:2874304 KEGG:ani:AN3413.2
Uniprot:Q5B7R7
Length = 259
Score = 111 (44.1 bits), Expect = 0.00029, P = 0.00029
Identities = 31/91 (34%), Positives = 45/91 (49%)
Query: 220 TFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNA-R 278
+ P + G+ V L PA GTG++A AV+ +L++AGV++A GS L N +
Sbjct: 159 SLPVKQSAKCGSVSVRLIPAPRGTGLVASPAVKRLLQLAGVQDAYTSSSGSTKTLENTLK 218
Query: 279 ATVVAVQKM------KQWREVSRERGIPMEE 303
AT +AV W E R P+EE
Sbjct: 219 ATFLAVVNTYGFLTPNLWTETKLTRS-PLEE 248
>FB|FBgn0004867 [details] [associations]
symbol:RpS2 "Ribosomal protein S2" species:7227 "Drosophila
melanogaster" [GO:0006412 "translation" evidence=ISS;NAS]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS;NAS]
[GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA;NAS] [GO:0005840 "ribosome" evidence=IDA;NAS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005811 "lipid
particle" evidence=IDA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0007275 GO:GO:0030154
EMBL:AE014134 GO:GO:0005811 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0048477 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0015935 eggNOG:COG0098 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 KO:K02981 TIGRFAMs:TIGR01020
OMA:GIKDVWT CTD:6187 GeneTree:ENSGT00390000001433 EMBL:U01334
EMBL:U01335 EMBL:X69120 EMBL:AY094799 PIR:S30395 RefSeq:NP_476874.1
UniGene:Dm.3451 ProteinModelPortal:P31009 SMR:P31009 DIP:DIP-18767N
IntAct:P31009 MINT:MINT-769241 STRING:P31009 PaxDb:P31009
PRIDE:P31009 EnsemblMetazoa:FBtr0079905 EnsemblMetazoa:FBtr0330682
GeneID:34309 KEGG:dme:Dmel_CG5920 FlyBase:FBgn0004867
InParanoid:P31009 OrthoDB:EOG4TX97W PhylomeDB:P31009
GenomeRNAi:34309 NextBio:787861 Bgee:P31009 GermOnline:CG5920
Uniprot:P31009
Length = 267
Score = 111 (44.1 bits), Expect = 0.00031, P = 0.00031
Identities = 30/86 (34%), Positives = 42/86 (48%)
Query: 202 SAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVE 261
S V RR + K T P + G G+ V L PA GTG+++ + +L MAG+E
Sbjct: 144 SVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIE 203
Query: 262 NALGKQLGSNNALNN-ARATVVAVQK 286
+ GS L N A+AT A+ K
Sbjct: 204 DCYTSARGSTGTLGNFAKATYAAIAK 229
>SGD|S000000455 [details] [associations]
symbol:MRPS5 "Mitochondrial ribosomal protein of the small
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;IPI] [GO:0032543
"mitochondrial translation" evidence=IC] [GO:0005763 "mitochondrial
small ribosomal subunit" evidence=IPI] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 SGD:S000000455
InterPro:IPR014720 Gene3D:3.30.160.20 EMBL:BK006936 GO:GO:0003723
GO:GO:0003735 GO:GO:0032543 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:L20296 GO:GO:0005763
RefSeq:NP_009810.3 GeneID:852553 KEGG:sce:YBR251W KO:K02988
RefSeq:NP_009814.3 GeneID:852557 KEGG:sce:YBR255W eggNOG:COG0098
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
GeneTree:ENSGT00390000001878 OrthoDB:EOG451J17 EMBL:Z36120
PIR:S38374 ProteinModelPortal:P33759 SMR:P33759 DIP:DIP-2869N
IntAct:P33759 MINT:MINT-615779 STRING:P33759 PaxDb:P33759
PeptideAtlas:P33759 EnsemblFungi:YBR251W CYGD:YBR251w
HOGENOM:HOG000247984 OMA:ICECAGI NextBio:971646
Genevestigator:P33759 GermOnline:YBR251W Uniprot:P33759
Length = 307
Score = 111 (44.1 bits), Expect = 0.00042, P = 0.00042
Identities = 33/107 (30%), Positives = 52/107 (48%)
Query: 201 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGV 260
K+ DA RN+ +P + T D + K+ LR A PG G+ + + E AG+
Sbjct: 196 KAHWDAVRNLKEIPRYENRTIYGDIDFRYHGVKLHLRSAKPGFGLRVNHVIFEICECAGI 255
Query: 261 ENALGKQLGSNNALNNARATVVAVQK-MKQWREVSRERGIPMEELWK 306
++ GK S N +N A+ T+ A K K EV+ RG + ++ K
Sbjct: 256 KDLSGKVYKSRNDMNIAKGTIEAFTKAQKTLDEVALGRGKKLVDVRK 302
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.367 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 306 222 0.00096 112 3 11 23 0.43 33
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 577 (61 KB)
Total size of DFA: 152 KB (2092 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.46u 0.13s 16.59t Elapsed: 00:00:01
Total cpu time: 16.46u 0.13s 16.59t Elapsed: 00:00:01
Start: Fri May 10 16:38:48 2013 End: Fri May 10 16:38:49 2013