BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021869
(306 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ST69|RR5_SPIOL 30S ribosomal protein S5, chloroplastic OS=Spinacia oleracea
GN=rps5 PE=1 SV=1
Length = 308
Score = 388 bits (997), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/246 (76%), Positives = 217/246 (88%), Gaps = 2/246 (0%)
Query: 62 IVFDDFNNPDEDAAVFDPPTPPEDYTPPPSFDELPMETEDEIAAAYEELYGPAYAGVSVL 121
I F + +NPDE+ FDPP PE Y PP + DE P E+E+EIA AYEELYG AY+G S+L
Sbjct: 64 ITFFEQDNPDEEI-TFDPPEKPEGYIPPRAVDEPPFESEEEIALAYEELYGAAYSGESLL 122
Query: 122 GNDVYVMDSKAKKTSAFG-KTKKEKVKDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGD 180
GNDVY MDSK KK + FG K+KKEK++DGFEE VVQVRRVTKVVKGGK ++FRAIVVVGD
Sbjct: 123 GNDVYAMDSKIKKATGFGSKSKKEKIRDGFEENVVQVRRVTKVVKGGKHMRFRAIVVVGD 182
Query: 181 KKGQVGVGVAKAKEVIAAVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPAS 240
KKGQVGVGV KAKEV++AVQK+AVDARRNI+TVPMTKYLTFPHR++ D+GAA+VMLRPA+
Sbjct: 183 KKGQVGVGVGKAKEVVSAVQKAAVDARRNIITVPMTKYLTFPHRNEADYGAARVMLRPAA 242
Query: 241 PGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIP 300
PGTGVIAGGAVR VLEMAGVENALGKQLGSNNALNNARAT+VAVQ M+Q+ +V+R+RGIP
Sbjct: 243 PGTGVIAGGAVRTVLEMAGVENALGKQLGSNNALNNARATIVAVQTMRQFSDVARDRGIP 302
Query: 301 MEELWK 306
MEELWK
Sbjct: 303 MEELWK 308
>sp|P93014|RR5_ARATH 30S ribosomal protein S5, chloroplastic OS=Arabidopsis thaliana
GN=rps5 PE=1 SV=1
Length = 303
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/263 (74%), Positives = 221/263 (84%), Gaps = 6/263 (2%)
Query: 47 STVLVRASESDKPNGIVFDDFNNPDEDAAVFDPPTPPEDYTPPPSFDELPMETEDEIAAA 106
S LV+AS +D I F+D VFDPP PE + PP FDE ETE+EIA A
Sbjct: 44 SLTLVKASSTDTET-IFFEDETPEITANVVFDPPIAPEGFVSPPYFDEGSDETEEEIATA 102
Query: 107 YEELYGPAYAGVSVLGNDVYVMDSKAKKTSAFG-KTKKEKVKDGFEERVVQVRRVTKVVK 165
+EELYGPAY+G S+LG D+YVMDSK KK+S G K KK+K++DGFEERVVQVRRVTKVVK
Sbjct: 103 FEELYGPAYSGESMLGKDIYVMDSKHKKSSGIGGKPKKDKIRDGFEERVVQVRRVTKVVK 162
Query: 166 GGKQLKFRAIVVVGDKKGQVGVGV--AKAKEVIAAVQKSAVDARRNIVTVPMTKYLTFPH 223
GGKQLKFRAIVVVGDK+G VGV AKAKEV+AAVQKSA+DARRNIV VPMTKY TFPH
Sbjct: 163 GGKQLKFRAIVVVGDKQGNVGV--GCAKAKEVVAAVQKSAIDARRNIVQVPMTKYSTFPH 220
Query: 224 RSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVA 283
RS+GD+GAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARAT+ A
Sbjct: 221 RSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATLAA 280
Query: 284 VQKMKQWREVSRERGIPMEELWK 306
VQ+M+Q+R+V++ERGIPMEELWK
Sbjct: 281 VQQMRQFRDVAQERGIPMEELWK 303
>sp|Q1XDJ0|RR5_PORYE 30S ribosomal protein S5, chloroplastic OS=Porphyra yezoensis
GN=rps5 PE=3 SV=1
Length = 174
Score = 201 bits (511), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 98/167 (58%), Positives = 135/167 (80%), Gaps = 1/167 (0%)
Query: 140 KTKKEKVKD-GFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAA 198
K K K KD G+EERVVQV+RVTKVVKGGK+L FR I+V+G+++GQVGVGV KA +VI A
Sbjct: 6 KQSKGKDKDSGWEERVVQVKRVTKVVKGGKKLSFRVILVIGNEQGQVGVGVGKASDVIGA 65
Query: 199 VQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMA 258
V+K DA++++VTVP+TK + PH +G GAAKV+LRP++PG+GVIAGG+VR VLE++
Sbjct: 66 VKKGVTDAKKHLVTVPLTKSNSIPHPINGISGAAKVILRPSAPGSGVIAGGSVRTVLELS 125
Query: 259 GVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
GV+N L KQLGSNN LNNARA + + +++ + E +++RG+P+E L+
Sbjct: 126 GVQNILAKQLGSNNTLNNARAVLNGLTQLRTFSEAAKDRGVPIESLY 172
>sp|P51298|RR5_PORPU 30S ribosomal protein S5, chloroplastic OS=Porphyra purpurea
GN=rps5 PE=3 SV=1
Length = 174
Score = 200 bits (509), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/167 (58%), Positives = 135/167 (80%), Gaps = 1/167 (0%)
Query: 140 KTKKEKVKD-GFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAA 198
K K K KD G+EERVVQV+RVTKVVKGGK+L FR I+VVG+++GQVGVGV KA +VI A
Sbjct: 6 KQGKSKEKDNGWEERVVQVKRVTKVVKGGKKLSFRVILVVGNEQGQVGVGVGKASDVIGA 65
Query: 199 VQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMA 258
V+K DA++++VTVP+TK + PH +G GAA+V+LRP++PG+GVIAGG+VR VLE++
Sbjct: 66 VKKGVTDAKKHLVTVPLTKSNSIPHPINGISGAAQVILRPSAPGSGVIAGGSVRTVLELS 125
Query: 259 GVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
GV+N L KQLGSNN LNNARA + + +++ + E +++RG+P+E L+
Sbjct: 126 GVQNILAKQLGSNNTLNNARAVLNGLTQLRTFSEAAKDRGVPIENLY 172
>sp|Q8YPJ5|RS5_NOSS1 30S ribosomal protein S5 OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=rpsE PE=3 SV=1
Length = 174
Score = 198 bits (504), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 99/166 (59%), Positives = 131/166 (78%), Gaps = 2/166 (1%)
Query: 140 KTKKEKVKDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAV 199
+TKKE+ ++ERV+Q+RRV+KVVKGGK+L FRAIVVVG+++GQVGVGV KA +VI AV
Sbjct: 10 RTKKEETN--WQERVIQIRRVSKVVKGGKKLSFRAIVVVGNERGQVGVGVGKASDVIGAV 67
Query: 200 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAG 259
+K D +++++ +P+TK + PH DG G AKVM+RPA+PGTGVIAGGAVR VLE+AG
Sbjct: 68 KKGVADGKKHLIDIPITKSNSIPHPIDGVGGGAKVMMRPAAPGTGVIAGGAVRTVLELAG 127
Query: 260 VENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
V N L KQLGSNN LNNARA V A+ ++ EV+ +RGI +E+L+
Sbjct: 128 VRNVLAKQLGSNNPLNNARAAVNALSTLRTLAEVAEDRGIAIEKLY 173
>sp|Q3MFA5|RS5_ANAVT 30S ribosomal protein S5 OS=Anabaena variabilis (strain ATCC 29413
/ PCC 7937) GN=rpsE PE=3 SV=1
Length = 174
Score = 198 bits (504), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 99/166 (59%), Positives = 131/166 (78%), Gaps = 2/166 (1%)
Query: 140 KTKKEKVKDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAV 199
+TKKE+ ++ERV+Q+RRV+KVVKGGK+L FRAIVVVG+++GQVGVGV KA +VI AV
Sbjct: 10 RTKKEETN--WQERVIQIRRVSKVVKGGKKLSFRAIVVVGNERGQVGVGVGKASDVIGAV 67
Query: 200 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAG 259
+K D +++++ +P+TK + PH DG G AKVM+RPA+PGTGVIAGGAVR VLE+AG
Sbjct: 68 KKGVADGKKHLIDIPITKSNSIPHPIDGVGGGAKVMMRPAAPGTGVIAGGAVRTVLELAG 127
Query: 260 VENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
V N L KQLGSNN LNNARA V A+ ++ EV+ +RGI +E+L+
Sbjct: 128 VRNVLAKQLGSNNPLNNARAAVNALSTLRTLAEVAEDRGIAIEKLY 173
>sp|B2ITN9|RS5_NOSP7 30S ribosomal protein S5 OS=Nostoc punctiforme (strain ATCC 29133 /
PCC 73102) GN=rpsE PE=3 SV=1
Length = 175
Score = 197 bits (500), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/166 (58%), Positives = 130/166 (78%), Gaps = 2/166 (1%)
Query: 140 KTKKEKVKDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAV 199
+ KKE+ ++ERV+Q+RRV+KVVKGGK+L FRAIVVVG+++GQVGVGV KA +VI AV
Sbjct: 11 RAKKEETT--WQERVIQIRRVSKVVKGGKKLSFRAIVVVGNERGQVGVGVGKASDVIGAV 68
Query: 200 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAG 259
+K D +++++ +P+TK + PH DG G AKV++RPA+PGTGVIAGGAVR VLE+AG
Sbjct: 69 KKGVADGKKHLIDIPITKSNSIPHPIDGVGGGAKVIMRPAAPGTGVIAGGAVRTVLELAG 128
Query: 260 VENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
V N L KQLGSNN LNNARA V A+ ++ EV+ +RGIP++ L+
Sbjct: 129 VRNVLAKQLGSNNPLNNARAAVNALSTLRTLSEVAEDRGIPIQNLY 174
>sp|B1WQS7|RS5_CYAA5 30S ribosomal protein S5 OS=Cyanothece sp. (strain ATCC 51142)
GN=rpsE PE=3 SV=1
Length = 173
Score = 196 bits (499), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/167 (57%), Positives = 133/167 (79%), Gaps = 1/167 (0%)
Query: 140 KTKKEKVKD-GFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAA 198
K+ ++K KD ++ERV+Q+RRV+KVVKGGK+L FRAIVVVG++KGQVGVGV KA +VI A
Sbjct: 6 KSNRDKSKDSNWQERVIQIRRVSKVVKGGKKLSFRAIVVVGNEKGQVGVGVGKAGDVIGA 65
Query: 199 VQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMA 258
V+K D ++ ++ V +TK + H + G G AKV++RPA+PGTGVIAGGAVR VLE+A
Sbjct: 66 VRKGVADGKKQLIDVSLTKSSSITHVAKGVSGGAKVIVRPAAPGTGVIAGGAVRTVLELA 125
Query: 259 GVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
G++N L KQLGSNN LNNARA + A++ ++ + EV++ERG+P+E L+
Sbjct: 126 GLKNILAKQLGSNNPLNNARAVINALEGLRTFSEVAQERGVPLEHLY 172
>sp|B0C1E9|RS5_ACAM1 30S ribosomal protein S5 OS=Acaryochloris marina (strain MBIC
11017) GN=rpsE PE=3 SV=1
Length = 177
Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/167 (60%), Positives = 131/167 (78%), Gaps = 1/167 (0%)
Query: 140 KTKKEKVKDG-FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAA 198
K + K KD ++ERVVQ+RRV+KVVKGGK+L FRAIVVVG+++GQVGVGV KA +VI A
Sbjct: 8 KNNRNKEKDSTWQERVVQIRRVSKVVKGGKKLSFRAIVVVGNERGQVGVGVGKASDVIGA 67
Query: 199 VQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMA 258
V+K D ++ +V VP+T+ + PH G GAAKVM+RPA+PGTGVIAGGAVR VLE+A
Sbjct: 68 VRKGVADGKKQLVEVPLTRSNSIPHPMIGRGGAAKVMMRPAAPGTGVIAGGAVRTVLELA 127
Query: 259 GVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
GV N L KQLGS+N LNNARAT+ A+ ++ + EV+ ERGI +E+L+
Sbjct: 128 GVRNVLAKQLGSDNPLNNARATLHALASLRTFSEVAGERGIEVEKLY 174
>sp|P73304|RS5_SYNY3 30S ribosomal protein S5 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=rpsE PE=3 SV=1
Length = 173
Score = 195 bits (496), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/167 (58%), Positives = 132/167 (79%), Gaps = 1/167 (0%)
Query: 140 KTKKEKVKD-GFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAA 198
KT +EK +D ++ERV+Q+RRV+KVVKGGK+L FRAIVVVG++ GQVGVGV KA +VI A
Sbjct: 6 KTSREKKEDTNWQERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGA 65
Query: 199 VQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMA 258
V+K D ++ ++ VP+TK + H ++G G AKV++RPA+PGTGVIAGGAVR VLE+A
Sbjct: 66 VRKGVADGKKQLIEVPLTKSNSITHITNGVSGGAKVVVRPAAPGTGVIAGGAVRTVLELA 125
Query: 259 GVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
GV+N L KQLGSNN LNNARA + A++ ++ + EV+ ERG+ +E L+
Sbjct: 126 GVKNILAKQLGSNNPLNNARAAINALETLRTFSEVAEERGVSVEHLY 172
>sp|B7KI03|RS5_CYAP7 30S ribosomal protein S5 OS=Cyanothece sp. (strain PCC 7424)
GN=rpsE PE=3 SV=1
Length = 173
Score = 193 bits (490), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/163 (57%), Positives = 130/163 (79%), Gaps = 1/163 (0%)
Query: 143 KEKVKDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKS 202
KEK + ++ERV+Q+RRV+KVVKGGK+L FRAIVVVG++ GQVGVGV KA +VI AV+K
Sbjct: 11 KEK-ETNWQERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKG 69
Query: 203 AVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVEN 262
D ++ ++ VP+TK + PH ++G G A V++RPA+PGTGVIAGGAVR VLE+AGV+N
Sbjct: 70 VADGKKQLIEVPLTKASSIPHLTNGASGGASVIMRPAAPGTGVIAGGAVRTVLELAGVKN 129
Query: 263 ALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
L KQLGS+N LNNARA + A++ ++ + EV++ER +P+E ++
Sbjct: 130 ILAKQLGSDNPLNNARAAINALETLRTFSEVAKERDVPLEHIY 172
>sp|O24705|RS5_SYNP6 30S ribosomal protein S5 OS=Synechococcus sp. (strain ATCC 27144 /
PCC 6301 / SAUG 1402/1) GN=rpsE PE=3 SV=1
Length = 180
Score = 193 bits (490), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 129/156 (82%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
++ERVVQ+RRVTKVVKGGK+L FRAIV+VG+++GQVGVGV KA +VI AV+K D +++
Sbjct: 25 WQERVVQIRRVTKVVKGGKKLSFRAIVIVGNERGQVGVGVGKASDVIGAVRKGVADGKKH 84
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
+V VP+T+ + PH S G+ GAA+V++RPA+PGTGVIAGGAVR VLE+AGV+N L K+LG
Sbjct: 85 LVNVPLTRDQSIPHPSTGEGGAAQVLIRPAAPGTGVIAGGAVRTVLELAGVKNVLAKRLG 144
Query: 270 SNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
S + LNNARA + A+ ++ ++EV++ R IP+E+L+
Sbjct: 145 SKSPLNNARAALEALSSLRTFQEVAQSRDIPVEQLY 180
>sp|Q31L23|RS5_SYNE7 30S ribosomal protein S5 OS=Synechococcus elongatus (strain PCC
7942) GN=rpsE PE=3 SV=1
Length = 180
Score = 193 bits (490), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 129/156 (82%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
++ERVVQ+RRVTKVVKGGK+L FRAIV+VG+++GQVGVGV KA +VI AV+K D +++
Sbjct: 25 WQERVVQIRRVTKVVKGGKKLSFRAIVIVGNERGQVGVGVGKASDVIGAVRKGVADGKKH 84
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
+V VP+T+ + PH S G+ GAA+V++RPA+PGTGVIAGGAVR VLE+AGV+N L K+LG
Sbjct: 85 LVNVPLTRDQSIPHPSTGEGGAAQVLIRPAAPGTGVIAGGAVRTVLELAGVKNVLAKRLG 144
Query: 270 SNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
S + LNNARA + A+ ++ ++EV++ R IP+E+L+
Sbjct: 145 SKSPLNNARAALEALSSLRTFQEVAQSRDIPVEQLY 180
>sp|B1XJJ1|RS5_SYNP2 30S ribosomal protein S5 OS=Synechococcus sp. (strain ATCC 27264 /
PCC 7002 / PR-6) GN=rpsE PE=3 SV=1
Length = 173
Score = 192 bits (488), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/167 (58%), Positives = 133/167 (79%), Gaps = 1/167 (0%)
Query: 140 KTKKEKVKD-GFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAA 198
K+ K K K+ ++ERV+Q+RRV+KVVKGGK+L FRAIVV+G++ G+VGVGV KA +VI A
Sbjct: 6 KSSKNKEKETNWQERVIQIRRVSKVVKGGKKLSFRAIVVIGNETGKVGVGVGKAGDVIGA 65
Query: 199 VQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMA 258
V+K DA++++V VP+TK T HR +G G AKVM+RPA+PGTGVIAGGAVR VLE+A
Sbjct: 66 VRKGVSDAKKHVVDVPLTKTNTITHRINGVAGGAKVMMRPAAPGTGVIAGGAVRTVLELA 125
Query: 259 GVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
GV+N L KQLGS++ LNNARATV A+ ++ + V++ERG+ +E ++
Sbjct: 126 GVKNILAKQLGSSSPLNNARATVDALGNLRSFSSVAQERGVSIERIY 172
>sp|B7K232|RS5_CYAP8 30S ribosomal protein S5 OS=Cyanothece sp. (strain PCC 8801)
GN=rpsE PE=3 SV=1
Length = 173
Score = 190 bits (482), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 131/167 (78%), Gaps = 1/167 (0%)
Query: 140 KTKKEKVKD-GFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAA 198
K+ + K K+ ++ERV+Q+RRV+KVVKGGK+L FRAIVVVG++ GQVGVGV KA +VI A
Sbjct: 6 KSSRTKAKETNWQERVIQIRRVSKVVKGGKKLSFRAIVVVGNENGQVGVGVGKAGDVIGA 65
Query: 199 VQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMA 258
V+K D ++ ++ V +TK + H + G G AKV++RPA+PGTGVIAGGAVR VLE+A
Sbjct: 66 VRKGVADGKKQLIDVSLTKASSITHITRGVSGGAKVIVRPAAPGTGVIAGGAVRTVLELA 125
Query: 259 GVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
GV+N L KQLGS+N LNNARA + A++ ++ + EV++ERG+P+E L+
Sbjct: 126 GVKNILAKQLGSSNPLNNARAVINALEGLRTFSEVAQERGVPLEHLY 172
>sp|A6MW17|RR5_RHDSA 30S ribosomal protein S5, chloroplastic OS=Rhodomonas salina
GN=rps5 PE=3 SV=1
Length = 168
Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/157 (59%), Positives = 128/157 (81%), Gaps = 1/157 (0%)
Query: 143 KEKVKDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKS 202
KEK D ++ERVVQ+RRVTKVVKGGK+L FRAI+++G++KG+VGVGV KA +VI AV+K+
Sbjct: 11 KEKETD-WQERVVQIRRVTKVVKGGKKLSFRAILIIGNEKGEVGVGVGKASDVIGAVKKA 69
Query: 203 AVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVEN 262
D ++ IV+VP+TK + PH G GAAKV++RP++PG+GVIAGG+VR +LE+AGV+N
Sbjct: 70 VSDGKKKIVSVPITKDSSIPHIVKGRSGAAKVIMRPSAPGSGVIAGGSVRTILELAGVKN 129
Query: 263 ALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 299
L KQLGSNN LNNARA A+ K+K + +V+++RGI
Sbjct: 130 ILAKQLGSNNPLNNARAATDALLKLKTFSQVAQDRGI 166
>sp|A2BTC1|RS5_PROMS 30S ribosomal protein S5 OS=Prochlorococcus marinus (strain AS9601)
GN=rpsE PE=3 SV=1
Length = 206
Score = 189 bits (479), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/156 (58%), Positives = 124/156 (79%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
++ERVVQ+RRV+K VKGGK++ FRAIVVVG++KGQVGVGV KA +VI AV+K D ++N
Sbjct: 50 WQERVVQIRRVSKTVKGGKKMSFRAIVVVGNEKGQVGVGVGKAGDVIGAVRKGVSDGKKN 109
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
+V VP+T + P S G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LG
Sbjct: 110 LVRVPLTPNNSIPTLSLGSDGAANVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLG 169
Query: 270 SNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
S LNNARA +VA+ +++ + VSRERGI +E+L+
Sbjct: 170 SKTPLNNARAAMVALSQLRTHKSVSRERGISLEQLY 205
>sp|Q3AW77|RS5_SYNS9 30S ribosomal protein S5 OS=Synechococcus sp. (strain CC9902)
GN=rpsE PE=3 SV=1
Length = 215
Score = 189 bits (479), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 87/156 (55%), Positives = 126/156 (80%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
++ERVVQ+RRV+K VKGGK++ FRAIVVVG++KGQVGVGV KA +VI AV+K D +++
Sbjct: 59 WQERVVQIRRVSKTVKGGKKMSFRAIVVVGNEKGQVGVGVGKAGDVIGAVRKGVADGKKH 118
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
+V VP+T++ + P S+G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LG
Sbjct: 119 LVKVPLTRHSSIPTLSNGRDGAASVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLG 178
Query: 270 SNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
S LNNARA +VA+ ++ +E ++ERGI +E+++
Sbjct: 179 SKTPLNNARAAMVALSSLRTHKETAKERGISLEQIY 214
>sp|Q7U4I4|RS5_SYNPX 30S ribosomal protein S5 OS=Synechococcus sp. (strain WH8102)
GN=rpsE PE=3 SV=1
Length = 215
Score = 187 bits (476), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 87/156 (55%), Positives = 126/156 (80%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
++ERVVQ+RRV+K VKGGK++ FRAIVVVG++KGQVGVGV KA +VI AV+K D +++
Sbjct: 59 WQERVVQIRRVSKTVKGGKKMSFRAIVVVGNEKGQVGVGVGKAGDVIGAVRKGVADGKKH 118
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
+V VP+T++ + P S+G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LG
Sbjct: 119 LVKVPLTRHNSIPTLSNGRDGAASVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLG 178
Query: 270 SNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
S LNNARA +VA+ ++ +E ++ERGI +E+++
Sbjct: 179 SKTPLNNARAAMVALSLLRTHKETAKERGISLEQIY 214
>sp|A8G745|RS5_PROM2 30S ribosomal protein S5 OS=Prochlorococcus marinus (strain MIT
9215) GN=rpsE PE=3 SV=1
Length = 206
Score = 187 bits (475), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 90/156 (57%), Positives = 123/156 (78%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
++ERVVQ+RRV+K VKGGK++ FRAIVVVG++KGQVGVGV KA +VI AV+K D ++N
Sbjct: 50 WQERVVQIRRVSKTVKGGKKMSFRAIVVVGNEKGQVGVGVGKAGDVIGAVRKGVSDGKKN 109
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
+V VP+T + P S G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LG
Sbjct: 110 LVRVPLTPNNSIPTLSKGRDGAANVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLG 169
Query: 270 SNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
S LNNARA +VA+ +++ + SRERGI +E+L+
Sbjct: 170 SKTPLNNARAAMVALSQLRTHKSASRERGISLEQLY 205
>sp|Q318K0|RS5_PROM9 30S ribosomal protein S5 OS=Prochlorococcus marinus (strain MIT
9312) GN=rpsE PE=3 SV=1
Length = 207
Score = 187 bits (475), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 90/156 (57%), Positives = 123/156 (78%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
++ERVVQ+RRV+K VKGGK++ FRAIVVVG++KGQVGVGV KA +VI AV+K D ++N
Sbjct: 51 WQERVVQIRRVSKTVKGGKKMSFRAIVVVGNEKGQVGVGVGKAGDVIGAVRKGVSDGKKN 110
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
+V VP+T + P S G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LG
Sbjct: 111 LVRVPLTPNNSIPTLSKGRDGAANVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLG 170
Query: 270 SNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
S LNNARA +VA+ +++ + SRERGI +E+L+
Sbjct: 171 SKTPLNNARAAMVALSQLRTHKSASRERGISLEQLY 206
>sp|Q3AMP6|RS5_SYNSC 30S ribosomal protein S5 OS=Synechococcus sp. (strain CC9605)
GN=rpsE PE=3 SV=1
Length = 214
Score = 187 bits (474), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/156 (55%), Positives = 126/156 (80%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
++ERVVQ+RRV+K VKGGK++ FRAIVVVG++KGQVGVGV KA +VI AV+K D +++
Sbjct: 58 WQERVVQIRRVSKTVKGGKKMSFRAIVVVGNEKGQVGVGVGKAGDVIGAVRKGVADGKKH 117
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
+V VP+T++ + P S+G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LG
Sbjct: 118 LVKVPLTRHNSIPTLSNGRDGAASVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLG 177
Query: 270 SNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
S LNNARA +VA+ ++ +E ++ERGI +E+++
Sbjct: 178 SKTPLNNARAAMVALSLLRTHKETAKERGISLEQIY 213
>sp|A5GIS9|RS5_SYNPW 30S ribosomal protein S5 OS=Synechococcus sp. (strain WH7803)
GN=rpsE PE=3 SV=1
Length = 215
Score = 187 bits (474), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 126/156 (80%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
++ERVVQ+RRV+K VKGGK++ FRAIVVVG+++GQVGVGV KA +VI AV+K D +++
Sbjct: 59 WQERVVQIRRVSKTVKGGKKMSFRAIVVVGNERGQVGVGVGKAGDVIGAVRKGVADGKKH 118
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
+V VP+T++ + P S+G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LG
Sbjct: 119 LVKVPLTRHNSIPTLSNGRDGAASVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLG 178
Query: 270 SNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
S LNNARA +VA+ ++ +E ++ERGI +E+++
Sbjct: 179 SKTPLNNARAAMVALDSLRTHKETAKERGISLEQIY 214
>sp|B0JHY7|RS5_MICAN 30S ribosomal protein S5 OS=Microcystis aeruginosa (strain
NIES-843) GN=rpsE PE=3 SV=1
Length = 173
Score = 187 bits (474), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/167 (55%), Positives = 130/167 (77%), Gaps = 1/167 (0%)
Query: 140 KTKKEKVKDG-FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAA 198
K +EK K+ ++ERV+Q+RRV+KVVKGGK+L FRAIVVVG++ GQVGVGV KA +VI A
Sbjct: 6 KGNREKEKETTWQERVIQIRRVSKVVKGGKKLSFRAIVVVGNENGQVGVGVGKAGDVIGA 65
Query: 199 VQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMA 258
V+K D ++ ++ V +TK + H + G G A+V++RPA+PGTGVIAGGAVR VLE+A
Sbjct: 66 VRKGVADGKKQLIEVSLTKASSITHLTRGASGGAQVIMRPAAPGTGVIAGGAVRTVLELA 125
Query: 259 GVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
GV+N L KQLGS+N LNNARA V A++ ++ + EV+++RG+ +E L+
Sbjct: 126 GVKNILAKQLGSDNPLNNARAAVNALETLRTFSEVAKDRGVSIEHLY 172
>sp|A2CC44|RS5_PROM3 30S ribosomal protein S5 OS=Prochlorococcus marinus (strain MIT
9303) GN=rpsE PE=3 SV=1
Length = 210
Score = 186 bits (473), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 126/156 (80%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
++ERVVQ+RRV+K VKGGK++ FRAIVVVG+++GQVGVGV KA +VI AV+K D +++
Sbjct: 54 WQERVVQIRRVSKTVKGGKKMSFRAIVVVGNERGQVGVGVGKAGDVIGAVRKGVADGKKH 113
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
+V VP+T++ + P S+G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LG
Sbjct: 114 LVKVPLTRHNSIPTLSNGREGAANVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLG 173
Query: 270 SNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
S LNNARA +VA+ ++ +E ++ERGI +E+++
Sbjct: 174 SKTPLNNARAAMVALASLRTHKETAKERGISLEQIY 209
>sp|Q7UZW0|RS5_PROMP 30S ribosomal protein S5 OS=Prochlorococcus marinus subsp. pastoris
(strain CCMP1986 / MED4) GN=rpsE PE=3 SV=1
Length = 206
Score = 186 bits (473), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 129/167 (77%), Gaps = 1/167 (0%)
Query: 139 GKTKKEKVKDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAA 198
G +K E+ + ++ERVVQ+RRV+K VKGGK++ FRAIVVVG++KGQVGVGV KA +VI A
Sbjct: 40 GDSKNERDSE-WQERVVQIRRVSKTVKGGKKMSFRAIVVVGNEKGQVGVGVGKAGDVIGA 98
Query: 199 VQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMA 258
V+K D ++++V VP+T + P S G GAA V++RPA+PGTGVIAGG++R VLE+A
Sbjct: 99 VRKGVSDGKKHLVRVPLTPNNSIPTLSKGRDGAANVLIRPAAPGTGVIAGGSIRTVLELA 158
Query: 259 GVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
G++N L K+LGS LNNARA +VA+ +++ + SRERGI +E+L+
Sbjct: 159 GIKNVLAKRLGSKTPLNNARAAMVALSQLRTHKSASRERGISLEQLY 205
>sp|Q7V529|RS5_PROMM 30S ribosomal protein S5 OS=Prochlorococcus marinus (strain MIT
9313) GN=rpsE PE=3 SV=1
Length = 209
Score = 186 bits (473), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 126/156 (80%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
++ERVVQ+RRV+K VKGGK++ FRAIVVVG+++GQVGVGV KA +VI AV+K D +++
Sbjct: 53 WQERVVQIRRVSKTVKGGKKMSFRAIVVVGNERGQVGVGVGKAGDVIGAVRKGVADGKKH 112
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
+V VP+T++ + P S+G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LG
Sbjct: 113 LVKVPLTRHNSIPTLSNGRDGAANVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLG 172
Query: 270 SNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
S LNNARA +VA+ ++ +E ++ERGI +E+++
Sbjct: 173 SKTPLNNARAAMVALASLRTHKETAKERGISLEQIY 208
>sp|P23402|RR5_CYAPA 30S ribosomal protein S5, cyanelle OS=Cyanophora paradoxa GN=rps5
PE=3 SV=1
Length = 169
Score = 185 bits (470), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/153 (58%), Positives = 125/153 (81%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
++ERVVQ+RRV+KVVKGGK+L FRAIVV+G+++GQVGVG+ KA +VI AV+K+A D +++
Sbjct: 17 WQERVVQIRRVSKVVKGGKKLSFRAIVVIGNERGQVGVGIGKASDVINAVKKAAADGKKH 76
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
+V VP+T+ + PH DG GAA+V++RP++ GTGVIAGGAVR VLE+AGV N L KQLG
Sbjct: 77 VVEVPLTRSNSIPHPIDGIGGAARVIMRPSAEGTGVIAGGAVRTVLELAGVRNILAKQLG 136
Query: 270 SNNALNNARATVVAVQKMKQWREVSRERGIPME 302
SNN LNNARA + A+ ++K + + +++RG+ E
Sbjct: 137 SNNPLNNARAAMNALSRLKTFSQFAKDRGVIAE 169
>sp|A2C4Y3|RS5_PROM1 30S ribosomal protein S5 OS=Prochlorococcus marinus (strain NATL1A)
GN=rpsE PE=3 SV=1
Length = 208
Score = 185 bits (469), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 125/156 (80%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
++ERVVQ+RRV+K VKGGK++ FRAIVVVG++KGQVGVGV KA +VI AV+K D +++
Sbjct: 52 WQERVVQIRRVSKTVKGGKKMSFRAIVVVGNEKGQVGVGVGKAGDVIGAVRKGVADGKKH 111
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
+V VP+T+ + P S+G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LG
Sbjct: 112 LVRVPLTRNSSIPTLSNGRDGAASVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLG 171
Query: 270 SNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
S LNNARA +VA+ +++ + ++ERGI +E+++
Sbjct: 172 SKTPLNNARAAMVALSELRTHKATAKERGISLEQIY 207
>sp|Q46IS5|RS5_PROMT 30S ribosomal protein S5 OS=Prochlorococcus marinus (strain NATL2A)
GN=rpsE PE=3 SV=1
Length = 208
Score = 185 bits (469), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 125/156 (80%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
++ERVVQ+RRV+K VKGGK++ FRAIVVVG++KGQVGVGV KA +VI AV+K D +++
Sbjct: 52 WQERVVQIRRVSKTVKGGKKMSFRAIVVVGNEKGQVGVGVGKAGDVIGAVRKGVADGKKH 111
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
+V VP+T+ + P S+G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LG
Sbjct: 112 LVRVPLTRNSSIPTLSNGRDGAASVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLG 171
Query: 270 SNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
S LNNARA +VA+ +++ + ++ERGI +E+++
Sbjct: 172 SKTPLNNARAAMVALSELRTHKATAKERGISLEQIY 207
>sp|A3PF31|RS5_PROM0 30S ribosomal protein S5 OS=Prochlorococcus marinus (strain MIT
9301) GN=rpsE PE=3 SV=1
Length = 206
Score = 184 bits (468), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/156 (57%), Positives = 123/156 (78%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
++ERVVQ+RRV+K VKGGK++ FRAIVVVG++KGQVGVGV KA +VI AV+K D ++N
Sbjct: 50 WQERVVQIRRVSKTVKGGKKMSFRAIVVVGNEKGQVGVGVGKAGDVIGAVRKGVSDGKKN 109
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
+V VP+T + P S G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LG
Sbjct: 110 LVRVPLTPNNSIPTLSLGRDGAANVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLG 169
Query: 270 SNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
S LNNARA +VA+ +++ + S+ERGI +E+L+
Sbjct: 170 SKTPLNNARAAMVALSQLRTHKSASKERGISLEQLY 205
>sp|A2BYS0|RS5_PROM5 30S ribosomal protein S5 OS=Prochlorococcus marinus (strain MIT
9515) GN=rpsE PE=3 SV=1
Length = 206
Score = 184 bits (468), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 128/167 (76%), Gaps = 1/167 (0%)
Query: 139 GKTKKEKVKDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAA 198
G +K E+ + ++ERVVQ+RRV K VKGGK++ FRAIVVVG++KGQVGVGV KA +VI A
Sbjct: 40 GDSKNERDSE-WQERVVQIRRVFKTVKGGKKMSFRAIVVVGNEKGQVGVGVGKAGDVIGA 98
Query: 199 VQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMA 258
V+K D ++++V VP+T + P S G GAA V++RPA+PGTGVIAGG++R VLE+A
Sbjct: 99 VRKGVSDGKKHLVRVPLTPNNSIPTLSKGRDGAANVLIRPAAPGTGVIAGGSIRTVLELA 158
Query: 259 GVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
G++N L K+LGS LNNARA +VA+ +++ + SRERGI +E+L+
Sbjct: 159 GIKNVLAKRLGSKTPLNNARAAMVALSQLRTHKSASRERGISLEQLY 205
>sp|P59126|RS5_THEEB 30S ribosomal protein S5 OS=Thermosynechococcus elongatus (strain
BP-1) GN=rpsE PE=3 SV=1
Length = 174
Score = 182 bits (463), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/164 (59%), Positives = 132/164 (80%), Gaps = 1/164 (0%)
Query: 142 KKEKVKDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQK 201
K EK D ++ERVVQ+RRV+KVVKGGK+L FRAIVVVG+++GQVGVGV KA +VI AV+K
Sbjct: 10 KVEKETD-WQERVVQIRRVSKVVKGGKKLSFRAIVVVGNERGQVGVGVGKAADVIGAVRK 68
Query: 202 SAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVE 261
D +++++ VP+TK + PH + G+ GAA+VM+RPA+PGTGVIAGG+VR VLE+AGV
Sbjct: 69 GVADGKKHLIDVPITKSNSIPHPTFGEGGAARVMIRPAAPGTGVIAGGSVRTVLELAGVR 128
Query: 262 NALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
N L KQLGS+N LNNARA + A+ ++ ++EV+ ER IP+E L+
Sbjct: 129 NVLAKQLGSSNPLNNARAALEALAALRTFQEVAEEREIPIENLY 172
>sp|A5GVX6|RS5_SYNR3 30S ribosomal protein S5 OS=Synechococcus sp. (strain RCC307)
GN=rpsE PE=3 SV=1
Length = 218
Score = 182 bits (463), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 125/156 (80%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
++ERV+Q+RRV+K VKGGK++ FRAIVVVG++KGQVGVGV KA +VI AV+K D +++
Sbjct: 62 WQERVIQIRRVSKTVKGGKKMSFRAIVVVGNEKGQVGVGVGKAGDVIGAVKKGVADGKKH 121
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
+V VP+T+ + P S G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LG
Sbjct: 122 LVKVPLTRSNSIPTISTGRDGAASVLMRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLG 181
Query: 270 SNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
S LNNARA +VA++ ++ ++ ++ERGI +E+++
Sbjct: 182 SKTPLNNARAAMVALRDLRTHQDTAKERGITLEQIY 217
>sp|A0T0J5|RR5_PHATC 30S ribosomal protein S5, chloroplastic OS=Phaeodactylum
tricornutum (strain CCAP 1055/1) GN=rps5 PE=3 SV=1
Length = 176
Score = 182 bits (463), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/148 (57%), Positives = 119/148 (80%)
Query: 152 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRNIV 211
ER++++ RV+KV KGGK+L FRAIVVVGD+ G+VGVGVAKA +V+ A +K+ D R+N++
Sbjct: 28 ERLIKISRVSKVTKGGKKLSFRAIVVVGDENGKVGVGVAKADDVVNAFKKAKTDGRKNLI 87
Query: 212 TVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSN 271
+P+TK L+ PH G+FGA KV++RP+ G+GVIAGGAVRIVLE+AGV+N + KQLGSN
Sbjct: 88 ELPITKALSIPHNVAGNFGACKVIMRPSIEGSGVIAGGAVRIVLEVAGVKNVIAKQLGSN 147
Query: 272 NALNNARATVVAVQKMKQWREVSRERGI 299
N LNNARA+V A+Q + +V+++R +
Sbjct: 148 NLLNNARASVCALQNLTTKAQVAKKRNL 175
>sp|Q7V9X8|RS5_PROMA 30S ribosomal protein S5 OS=Prochlorococcus marinus (strain SARG /
CCMP1375 / SS120) GN=rpsE PE=3 SV=1
Length = 211
Score = 182 bits (462), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 123/156 (78%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
++ERV+Q+RRV+K VKGGK++ FRAIVVVG++KGQVGVGV KA +VI AV+K D ++N
Sbjct: 55 WQERVIQIRRVSKTVKGGKKMSFRAIVVVGNEKGQVGVGVGKAGDVIGAVRKGVADGKKN 114
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
+V VP+T + P S+G GAA V++RPA+PGTGVIAGG++R VLE+AG++N L K+LG
Sbjct: 115 LVRVPLTPNSSIPTLSNGRDGAASVLIRPAAPGTGVIAGGSIRTVLELAGIKNVLAKRLG 174
Query: 270 SNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
S LNNARA +VA+ ++ + ++ERGI +E+++
Sbjct: 175 SKTPLNNARAAMVALSLLRTHKATAKERGISLEQIY 210
>sp|Q6B8W9|RR5_GRATL 30S ribosomal protein S5, chloroplastic OS=Gracilaria
tenuistipitata var. liui GN=rps5 PE=3 SV=1
Length = 172
Score = 181 bits (458), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 130/169 (76%), Gaps = 5/169 (2%)
Query: 142 KKEKVKD-----GFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVI 196
KK+ +KD +EE+VVQV+RVTKVVKGGK+L FRAI++VG++KG++GVG+ KA +VI
Sbjct: 2 KKKSIKDKEQENNWEEKVVQVKRVTKVVKGGKKLSFRAILIVGNEKGEIGVGIGKASDVI 61
Query: 197 AAVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLE 256
AV+K DA+++I+ VP+TK + PH +G GAAKV+LRP++ G+GVIAGG+ R VLE
Sbjct: 62 GAVKKGVTDAKKHIINVPLTKSYSIPHPIEGISGAAKVILRPSAIGSGVIAGGSTRTVLE 121
Query: 257 MAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
+AGV+N L KQL S+N LNNARA + A+ +++ ++ ++ R I +E L+
Sbjct: 122 LAGVKNILAKQLRSSNTLNNARAVLNALSQLRTFQNTAQNRDINIERLF 170
>sp|Q4G352|RR5_EMIHU 30S ribosomal protein S5, chloroplastic OS=Emiliania huxleyi
GN=rps5 PE=3 SV=1
Length = 159
Score = 178 bits (451), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 85/141 (60%), Positives = 115/141 (81%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
+EERVV V+RVTKVVKGGK+L FRA+VVVGD++G+VGVGV KA +V AV+K D ++N
Sbjct: 17 WEERVVSVQRVTKVVKGGKKLSFRAVVVVGDQQGKVGVGVGKASDVSTAVRKGVTDGKKN 76
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
++TVP+T + PH+ +G FGAAK++LRP++PG GVIAGGA RIVLE+AG++N L KQLG
Sbjct: 77 VITVPLTSSNSIPHKINGRFGAAKLVLRPSAPGCGVIAGGAPRIVLELAGIKNILSKQLG 136
Query: 270 SNNALNNARATVVAVQKMKQW 290
SN+ LNNARAT+ + ++ +
Sbjct: 137 SNSLLNNARATIDGLSNLRTF 157
>sp|A0T0Y9|RR5_THAPS 30S ribosomal protein S5, chloroplastic OS=Thalassiosira pseudonana
GN=rps5 PE=3 SV=1
Length = 179
Score = 177 bits (449), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 81/148 (54%), Positives = 115/148 (77%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
F ER++++ RVTKV KGGK+L FRA+VV+GD+ G+VGVGV KA++V+ A +K+ D R+N
Sbjct: 26 FVERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKAKTDGRKN 85
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
++ VP+TK L+ PH GD GA K+++RP+ G+GVIAGGAVR VLE+AG++N + KQLG
Sbjct: 86 LIDVPITKSLSIPHAVIGDLGACKIIMRPSIEGSGVIAGGAVRTVLEVAGIKNVIAKQLG 145
Query: 270 SNNALNNARATVVAVQKMKQWREVSRER 297
S+N LNNAR +VA++ + EV R+R
Sbjct: 146 SDNLLNNARTAIVALESLTTLDEVKRKR 173
>sp|P49493|RR5_ODOSI 30S ribosomal protein S5, chloroplastic OS=Odontella sinensis
GN=rps5 PE=3 SV=1
Length = 185
Score = 172 bits (436), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 79/148 (53%), Positives = 112/148 (75%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
F ER++++ RV+KV KGGK+L FRAIVVVG++ GQVGVGV KA +V+ A +K+ D R+N
Sbjct: 26 FVERLIKISRVSKVTKGGKKLSFRAIVVVGNENGQVGVGVGKADDVVNAFKKAKADGRKN 85
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
++ +P+TK L+ PH G FGA K+++RP+ G+GVIAGG+VR VLE+AG++N + KQLG
Sbjct: 86 LIKIPITKSLSIPHNVIGIFGACKIIMRPSIEGSGVIAGGSVRTVLEVAGIKNVIAKQLG 145
Query: 270 SNNALNNARATVVAVQKMKQWREVSRER 297
SNN LNNARA V + + +V ++R
Sbjct: 146 SNNVLNNARAAVSGLNNLTTKSQVLKKR 173
>sp|Q7NEG9|RS5_GLOVI 30S ribosomal protein S5 OS=Gloeobacter violaceus (strain PCC 7421)
GN=rpsE PE=3 SV=1
Length = 223
Score = 163 bits (413), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/166 (56%), Positives = 122/166 (73%)
Query: 140 KTKKEKVKDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAV 199
K ++ + + F+ERVVQ+RRVTKVVKGGK+L FRA++VVGD G+VGVGV KA +VI AV
Sbjct: 56 KAERAQAETEFQERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAV 115
Query: 200 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAG 259
+K DAR+ ++ VP+ K + PH G GAA V L+PAS GTGVIAGGAVR VLE+AG
Sbjct: 116 KKGVSDARKALIRVPLNKINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAG 175
Query: 260 VENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
++N L K LGS + LNNARA A+ +++ EV+ ERG+P+ LW
Sbjct: 176 IKNVLAKSLGSKSPLNNARAAADALSRLRTLSEVAGERGVPVSNLW 221
>sp|Q9TLU8|RR5_CYACA 30S ribosomal protein S5, chloroplastic OS=Cyanidium caldarium
GN=rps5 PE=3 SV=1
Length = 168
Score = 162 bits (409), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 74/138 (53%), Positives = 105/138 (76%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
+ ERV+Q+ RVTKVVKGGK+L FRAI+V+G+ +G VGVGV KA +VI AV+K D ++
Sbjct: 17 WSERVIQITRVTKVVKGGKKLSFRAIIVIGNNQGSVGVGVGKASDVIGAVKKGVSDCKKQ 76
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
I+ P+T T H +G FGAA V+L+P+ G+GVIAGGA+R V+E++G++N + KQLG
Sbjct: 77 IIEFPLTSSSTISHAVEGRFGAASVILKPSVQGSGVIAGGAMRTVIELSGIKNIVAKQLG 136
Query: 270 SNNALNNARATVVAVQKM 287
+ N LNNA+AT+ A+ K+
Sbjct: 137 TKNHLNNAKATINALSKL 154
>sp|O46910|RR5_GUITH 30S ribosomal protein S5, chloroplastic OS=Guillardia theta GN=rps5
PE=3 SV=1
Length = 169
Score = 160 bits (406), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 85/160 (53%), Positives = 123/160 (76%), Gaps = 1/160 (0%)
Query: 143 KEKVKDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKS 202
KEK D ++ERV+QVRRVTKVVKGGK+L FRAI+++G+++GQVGVGV KA +VI AV+K+
Sbjct: 11 KEKETD-WQERVIQVRRVTKVVKGGKKLSFRAIIILGNERGQVGVGVGKASDVIGAVKKA 69
Query: 203 AVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVEN 262
D R+N++ +P+T + PH G GAAKV+++P++PG+GVIAGG+VR +LE+AG++N
Sbjct: 70 VTDGRKNLINIPLTNQNSIPHIVQGYSGAAKVIIKPSAPGSGVIAGGSVRTILELAGIKN 129
Query: 263 ALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPME 302
L KQLGS+N LNNARA A+ ++ + V +R + +
Sbjct: 130 ILAKQLGSSNPLNNARAAANALINLRTYTSVLNDRNLDLH 169
>sp|A5D5H1|RS5_PELTS 30S ribosomal protein S5 OS=Pelotomaculum thermopropionicum (strain
DSM 13744 / JCM 10971 / SI) GN=rpsE PE=3 SV=1
Length = 166
Score = 160 bits (404), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 110/154 (71%), Gaps = 1/154 (0%)
Query: 152 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRNIV 211
E+VV + RV KVVKGG++ F A++VVGD G VG G+ KA EV A++K DA++N++
Sbjct: 13 EKVVFINRVAKVVKGGRRFSFSALMVVGDGNGHVGAGLGKAGEVPEAIRKGIEDAKKNMI 72
Query: 212 TVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSN 271
VP+ T PH G+FGA KV+L+PA+PGTGVIAGG VR +LE+AGV + L K LGSN
Sbjct: 73 KVPLAGT-TIPHEVIGEFGAGKVLLKPAAPGTGVIAGGPVRAILELAGVRDILTKSLGSN 131
Query: 272 NALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
NA N RAT+ A++ +K EV+R RG P+EEL
Sbjct: 132 NANNMVRATIEALKSLKTPEEVARLRGKPVEELL 165
>sp|A4XLR3|RS5_CALS8 30S ribosomal protein S5 OS=Caldicellulosiruptor saccharolyticus
(strain ATCC 43494 / DSM 8903) GN=rpsE PE=3 SV=1
Length = 168
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 114/157 (72%), Gaps = 1/157 (0%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
+ERVV + RV KVVKGGK+LKF AIVVVGD+ G VG G KA E+ A++K+ DA+++
Sbjct: 13 LKERVVNINRVAKVVKGGKRLKFSAIVVVGDENGHVGAGHGKAAEIPDAIRKAIEDAKKH 72
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
++ VP+ T PH + GDFGA+KV+++PA GTGVIAGGAVR V E+AG+++ K LG
Sbjct: 73 LIEVPIVGT-TIPHEAIGDFGASKVLIKPAPEGTGVIAGGAVRAVCELAGIKDIRTKSLG 131
Query: 270 SNNALNNARATVVAVQKMKQWREVSRERGIPMEELWK 306
SNN N AT+ A++++K+ EV+R RG +EE+ K
Sbjct: 132 SNNPANVVHATIEALKQLKKPEEVARLRGKTLEEIIK 168
>sp|Q67JW0|RS5_SYMTH 30S ribosomal protein S5 OS=Symbiobacterium thermophilum (strain T
/ IAM 14863) GN=rpsE PE=3 SV=1
Length = 166
Score = 158 bits (400), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 115/164 (70%), Gaps = 1/164 (0%)
Query: 142 KKEKVKDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQK 201
+ E V+ +E++V +RRV K VKGG+++ F A+VVVGD G+VG G+ KA E+ AV+K
Sbjct: 3 RNENVQGELKEKMVDLRRVAKTVKGGRRMSFSAVVVVGDGNGRVGAGLGKAAEIPEAVRK 62
Query: 202 SAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVE 261
DA+++++ +P+ T PH G FGA KV+L+PASPGTGVIAGGAVR VLE AGV
Sbjct: 63 GTEDAKKHMIKIPLNGT-TIPHEVIGRFGAGKVLLKPASPGTGVIAGGAVRAVLEAAGVR 121
Query: 262 NALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
+ L K LGSNNA N AT+ ++++K EV++ RG P+E++
Sbjct: 122 DILTKSLGSNNAANQVLATLAGLRQLKSAEEVAKLRGKPVEQIL 165
>sp|C5D3T4|RS5_GEOSW 30S ribosomal protein S5 OS=Geobacillus sp. (strain WCH70) GN=rpsE
PE=3 SV=1
Length = 166
Score = 158 bits (399), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/156 (52%), Positives = 111/156 (71%), Gaps = 1/156 (0%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
EERVV V RV KVVKGG++L+F A+VVVGDK G VG G KA+EV A++K+ DA++N
Sbjct: 11 LEERVVAVNRVAKVVKGGRRLRFSALVVVGDKNGHVGFGTGKAQEVPDAIRKAIEDAKKN 70
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
++ VP+ T PH G FGA K++L+PAS GTGVIAGG R VLE+AG+ + L K +G
Sbjct: 71 LIEVPIVGT-TIPHEVIGHFGAGKIILKPASEGTGVIAGGPARAVLELAGISDILSKSIG 129
Query: 270 SNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
SN +N RATV ++++K+ +V+R RG +EEL
Sbjct: 130 SNTPINMVRATVDGLKQLKRAEDVARLRGKTVEELL 165
>sp|B9MKG4|RS5_CALBD 30S ribosomal protein S5 OS=Caldicellulosiruptor bescii (strain
ATCC BAA-1888 / DSM 6725 / Z-1320) GN=rpsE PE=3 SV=1
Length = 168
Score = 157 bits (397), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 81/157 (51%), Positives = 114/157 (72%), Gaps = 1/157 (0%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
+ERVV + RV KVVKGGK+LKF AIVVVGD+ G VG G KA E+ A++K+ DA+++
Sbjct: 13 LKERVVNINRVAKVVKGGKRLKFSAIVVVGDENGHVGAGHGKAAEIPDAIRKAIEDAKKH 72
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
++ VP+ T PH + GDFGA+KV+++PA GTGVIAGGAVR V E+AG+++ K LG
Sbjct: 73 LIEVPIVGT-TIPHEAIGDFGASKVLIKPAPEGTGVIAGGAVRAVCELAGIKDIRTKSLG 131
Query: 270 SNNALNNARATVVAVQKMKQWREVSRERGIPMEELWK 306
SNN N AT+ A++++++ EV+R RG +EE+ K
Sbjct: 132 SNNPANVVHATIEALKQLRRPEEVARIRGKTLEEILK 168
>sp|Q6HPP1|RS5_BACHK 30S ribosomal protein S5 OS=Bacillus thuringiensis subsp. konkukian
(strain 97-27) GN=rpsE PE=3 SV=1
Length = 166
Score = 157 bits (397), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 81/156 (51%), Positives = 111/156 (71%), Gaps = 1/156 (0%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
EERVV + RV KVVKGG++ +F A+VVVGDK G VG G KA+EV A++K+ DA++N
Sbjct: 11 LEERVVTINRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPDAIRKAIEDAKKN 70
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
++ VP+ T PH +G FGA +V L+PA+ GTGVIAGG VR VLE+AGV++ L K LG
Sbjct: 71 LIAVPLVGT-TIPHTINGHFGAGEVFLKPAAEGTGVIAGGPVRAVLELAGVQDILSKSLG 129
Query: 270 SNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
SN +N RATV + ++K+ +V++ RG +EEL
Sbjct: 130 SNTPINMIRATVNGLSELKRAEDVAKLRGKSVEELL 165
>sp|Q63H73|RS5_BACCZ 30S ribosomal protein S5 OS=Bacillus cereus (strain ZK / E33L)
GN=rpsE PE=3 SV=1
Length = 166
Score = 157 bits (397), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 81/156 (51%), Positives = 111/156 (71%), Gaps = 1/156 (0%)
Query: 150 FEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKKGQVGVGVAKAKEVIAAVQKSAVDARRN 209
EERVV + RV KVVKGG++ +F A+VVVGDK G VG G KA+EV A++K+ DA++N
Sbjct: 11 LEERVVTINRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPDAIRKAIEDAKKN 70
Query: 210 IVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLG 269
++ VP+ T PH +G FGA +V L+PA+ GTGVIAGG VR VLE+AGV++ L K LG
Sbjct: 71 LIAVPLVGT-TIPHTINGHFGAGEVFLKPAAEGTGVIAGGPVRAVLELAGVQDILSKSLG 129
Query: 270 SNNALNNARATVVAVQKMKQWREVSRERGIPMEELW 305
SN +N RATV + ++K+ +V++ RG +EEL
Sbjct: 130 SNTPINMIRATVNGLSELKRAEDVAKLRGKSVEELL 165
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,225,457
Number of Sequences: 539616
Number of extensions: 5002685
Number of successful extensions: 17334
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 16006
Number of HSP's gapped (non-prelim): 802
length of query: 306
length of database: 191,569,459
effective HSP length: 117
effective length of query: 189
effective length of database: 128,434,387
effective search space: 24274099143
effective search space used: 24274099143
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)