Query 021871
Match_columns 306
No_of_seqs 146 out of 2143
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 10:33:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021871.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021871hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lxd_A FAD-dependent pyridine 100.0 3.1E-33 1.1E-37 249.1 29.1 241 50-305 8-249 (415)
2 3fg2_P Putative rubredoxin red 100.0 8E-33 2.7E-37 245.6 30.6 238 52-305 2-239 (404)
3 3ef6_A Toluene 1,2-dioxygenase 100.0 2.9E-33 1E-37 248.7 27.3 238 51-305 2-239 (410)
4 1q1r_A Putidaredoxin reductase 100.0 5.9E-32 2E-36 241.7 27.4 242 50-305 3-248 (431)
5 2gqw_A Ferredoxin reductase; f 100.0 2.2E-31 7.4E-36 236.5 25.5 231 50-305 6-237 (408)
6 3oc4_A Oxidoreductase, pyridin 100.0 4.7E-31 1.6E-35 237.5 25.9 238 52-306 3-243 (452)
7 2bc0_A NADH oxidase; flavoprot 100.0 1.7E-30 5.7E-35 236.0 25.4 240 50-305 34-289 (490)
8 3klj_A NAD(FAD)-dependent dehy 100.0 1E-31 3.4E-36 236.4 16.5 223 49-305 7-229 (385)
9 2v3a_A Rubredoxin reductase; a 100.0 1.6E-30 5.5E-35 229.3 22.8 239 50-305 3-241 (384)
10 3iwa_A FAD-dependent pyridine 100.0 2.6E-30 8.8E-35 233.9 24.4 246 51-305 3-256 (472)
11 1xhc_A NADH oxidase /nitrite r 100.0 2E-30 6.8E-35 227.0 21.8 225 51-305 8-232 (367)
12 2cdu_A NADPH oxidase; flavoenz 100.0 4.3E-30 1.5E-34 231.3 24.5 238 52-305 1-245 (452)
13 3ics_A Coenzyme A-disulfide re 100.0 1.6E-29 5.4E-34 234.7 25.8 258 29-305 15-280 (588)
14 3ntd_A FAD-dependent pyridine 100.0 2.3E-29 7.7E-34 232.8 24.7 239 52-305 2-265 (565)
15 3kd9_A Coenzyme A disulfide re 100.0 3E-29 1E-33 225.5 24.4 237 50-305 2-242 (449)
16 1m6i_A Programmed cell death p 100.0 7E-30 2.4E-34 231.8 19.9 253 49-305 9-280 (493)
17 1nhp_A NADH peroxidase; oxidor 100.0 4.2E-29 1.5E-33 224.4 24.8 235 52-305 1-244 (447)
18 3cgb_A Pyridine nucleotide-dis 100.0 3.7E-29 1.3E-33 226.6 23.9 256 29-305 15-280 (480)
19 4eqs_A Coenzyme A disulfide re 100.0 2.2E-29 7.4E-34 225.3 20.7 230 53-305 2-238 (437)
20 4g6h_A Rotenone-insensitive NA 100.0 2.9E-28 1E-32 221.1 17.7 231 48-305 39-330 (502)
21 3itj_A Thioredoxin reductase 1 100.0 5E-28 1.7E-32 209.5 13.1 233 49-305 20-269 (338)
22 2zbw_A Thioredoxin reductase; 99.9 3.7E-27 1.3E-31 204.0 16.8 234 50-305 4-250 (335)
23 3f8d_A Thioredoxin reductase ( 99.9 6.6E-27 2.3E-31 201.1 18.2 226 50-305 14-249 (323)
24 1trb_A Thioredoxin reductase; 99.9 2.1E-27 7.1E-32 204.3 14.4 231 50-305 4-245 (320)
25 3ab1_A Ferredoxin--NADP reduct 99.9 2.9E-27 1E-31 206.7 15.4 237 49-305 12-261 (360)
26 2hqm_A GR, grase, glutathione 99.9 1.8E-27 6.1E-32 215.5 13.3 240 50-305 10-283 (479)
27 1mo9_A ORF3; nucleotide bindin 99.9 2E-25 6.9E-30 204.1 26.8 240 49-305 41-314 (523)
28 1zk7_A HGII, reductase, mercur 99.9 9E-26 3.1E-30 203.9 23.0 234 50-305 3-269 (467)
29 3dk9_A Grase, GR, glutathione 99.9 6.3E-27 2.2E-31 212.0 14.1 243 49-305 18-291 (478)
30 1onf_A GR, grase, glutathione 99.9 9.7E-27 3.3E-31 211.7 14.9 238 51-306 2-274 (500)
31 1ges_A Glutathione reductase; 99.9 3.6E-27 1.2E-31 211.9 11.9 235 50-305 3-263 (450)
32 3r9u_A Thioredoxin reductase; 99.9 1.3E-26 4.5E-31 198.6 14.7 226 50-305 3-242 (315)
33 1fl2_A Alkyl hydroperoxide red 99.9 2E-26 6.9E-31 197.2 15.7 225 52-305 2-240 (310)
34 2r9z_A Glutathione amide reduc 99.9 3.9E-26 1.3E-30 205.8 18.0 237 50-305 3-262 (463)
35 3lzw_A Ferredoxin--NADP reduct 99.9 1E-26 3.5E-31 200.8 13.3 228 51-305 7-248 (332)
36 3cty_A Thioredoxin reductase; 99.9 1.3E-25 4.6E-30 192.9 19.7 226 50-305 15-250 (319)
37 2wpf_A Trypanothione reductase 99.9 5.1E-27 1.7E-31 213.1 11.3 236 51-305 7-290 (495)
38 2q7v_A Thioredoxin reductase; 99.9 2.8E-26 9.5E-31 197.7 15.3 226 50-305 7-247 (325)
39 1zmd_A Dihydrolipoyl dehydroge 99.9 4.3E-25 1.5E-29 199.8 23.8 242 50-305 5-280 (474)
40 2qae_A Lipoamide, dihydrolipoy 99.9 4.8E-25 1.6E-29 199.2 23.6 239 51-305 2-274 (468)
41 3urh_A Dihydrolipoyl dehydroge 99.9 5.9E-26 2E-30 206.3 17.6 243 49-305 23-298 (491)
42 3fbs_A Oxidoreductase; structu 99.9 2.2E-26 7.6E-31 195.6 13.8 217 51-305 2-224 (297)
43 1fec_A Trypanothione reductase 99.9 1E-26 3.5E-31 210.9 12.3 236 51-305 3-286 (490)
44 3s5w_A L-ornithine 5-monooxyge 99.9 2.9E-26 1E-30 207.0 14.2 250 50-305 29-375 (463)
45 3gwf_A Cyclohexanone monooxyge 99.9 3.3E-26 1.1E-30 209.2 14.7 183 51-242 8-213 (540)
46 3h8l_A NADH oxidase; membrane 99.9 2.4E-25 8.2E-30 197.8 19.8 226 52-305 2-268 (409)
47 1xdi_A RV3303C-LPDA; reductase 99.9 4.6E-25 1.6E-29 200.8 22.0 240 51-305 2-277 (499)
48 3lad_A Dihydrolipoamide dehydr 99.9 1.4E-25 4.7E-30 203.2 18.2 240 50-305 2-278 (476)
49 2q0l_A TRXR, thioredoxin reduc 99.9 1E-25 3.4E-30 193.0 15.8 226 52-305 2-239 (311)
50 2a87_A TRXR, TR, thioredoxin r 99.9 5.7E-26 1.9E-30 196.6 13.9 228 49-305 12-250 (335)
51 2a8x_A Dihydrolipoyl dehydroge 99.9 4.8E-26 1.6E-30 205.5 13.8 240 51-305 3-269 (464)
52 3l8k_A Dihydrolipoyl dehydroge 99.9 9.9E-26 3.4E-30 203.4 15.6 236 51-305 4-270 (466)
53 4gcm_A TRXR, thioredoxin reduc 99.9 2E-25 6.8E-30 191.3 16.7 230 50-305 5-241 (312)
54 4dna_A Probable glutathione re 99.9 2.1E-26 7.2E-31 207.7 11.0 238 51-305 5-266 (463)
55 4a5l_A Thioredoxin reductase; 99.9 6.5E-26 2.2E-30 194.4 13.6 238 50-305 3-248 (314)
56 2yqu_A 2-oxoglutarate dehydrog 99.9 7.8E-25 2.7E-29 197.1 21.1 236 52-305 2-262 (455)
57 3o0h_A Glutathione reductase; 99.9 3.5E-26 1.2E-30 207.4 12.2 238 51-305 26-286 (484)
58 1vdc_A NTR, NADPH dependent th 99.9 1.3E-25 4.5E-30 194.1 15.0 239 50-305 7-257 (333)
59 3d1c_A Flavin-containing putat 99.9 1.9E-25 6.4E-30 195.8 16.1 241 50-306 3-271 (369)
60 1dxl_A Dihydrolipoamide dehydr 99.9 1.1E-24 3.9E-29 196.9 21.5 241 49-305 4-277 (470)
61 1ebd_A E3BD, dihydrolipoamide 99.9 2.3E-25 7.8E-30 200.6 16.8 234 51-305 3-268 (455)
62 1v59_A Dihydrolipoamide dehydr 99.9 2.6E-25 9E-30 201.4 17.3 241 51-305 5-285 (478)
63 2eq6_A Pyruvate dehydrogenase 99.9 2.9E-25 9.8E-30 200.3 17.4 234 51-305 6-269 (464)
64 3qfa_A Thioredoxin reductase 1 99.9 6.9E-26 2.4E-30 206.8 12.9 243 49-305 30-313 (519)
65 4ap3_A Steroid monooxygenase; 99.9 4E-25 1.4E-29 202.5 17.7 185 50-242 20-226 (549)
66 3uox_A Otemo; baeyer-villiger 99.9 2.9E-26 1E-30 209.8 9.7 189 49-242 7-220 (545)
67 3dgh_A TRXR-1, thioredoxin red 99.9 4E-25 1.4E-29 200.4 17.0 242 49-305 7-287 (483)
68 1ojt_A Surface protein; redox- 99.9 4.1E-26 1.4E-30 206.8 9.5 237 51-305 6-284 (482)
69 4fk1_A Putative thioredoxin re 99.9 2.2E-25 7.7E-30 190.3 13.6 221 47-304 2-233 (304)
70 1hyu_A AHPF, alkyl hydroperoxi 99.9 2.2E-24 7.4E-29 197.0 20.1 228 49-305 210-451 (521)
71 4a9w_A Monooxygenase; baeyer-v 99.9 3E-25 1E-29 193.3 13.7 239 51-306 3-284 (357)
72 3dgz_A Thioredoxin reductase 2 99.9 8.8E-25 3E-29 198.4 17.1 242 50-305 5-285 (488)
73 3sx6_A Sulfide-quinone reducta 99.9 1.4E-24 4.8E-29 194.4 17.9 234 51-305 4-267 (437)
74 1lvl_A Dihydrolipoamide dehydr 99.9 2.9E-24 1E-28 193.4 19.6 233 51-305 5-266 (458)
75 4b1b_A TRXR, thioredoxin reduc 99.9 1.6E-25 5.6E-30 203.8 9.7 239 52-305 43-317 (542)
76 3k30_A Histamine dehydrogenase 99.9 2E-25 6.9E-30 210.3 10.5 245 25-305 362-622 (690)
77 2xve_A Flavin-containing monoo 99.9 3E-24 1E-28 193.4 17.0 225 52-306 3-275 (464)
78 1ps9_A 2,4-dienoyl-COA reducta 99.9 1.6E-24 5.3E-29 203.7 15.0 250 13-305 336-626 (671)
79 3hyw_A Sulfide-quinone reducta 99.9 1.6E-24 5.6E-29 193.5 13.8 231 52-305 3-254 (430)
80 3ic9_A Dihydrolipoamide dehydr 99.9 7.8E-26 2.7E-30 205.3 5.3 235 51-305 8-272 (492)
81 2x8g_A Thioredoxin glutathione 99.9 2.1E-23 7.2E-28 193.9 19.0 243 49-305 105-393 (598)
82 3h28_A Sulfide-quinone reducta 99.9 6.3E-24 2.2E-28 189.8 13.6 227 51-305 2-254 (430)
83 2vdc_G Glutamate synthase [NAD 99.9 1.1E-23 3.9E-28 188.6 12.2 223 49-305 120-376 (456)
84 1lqt_A FPRA; NADP+ derivative, 99.9 6.3E-24 2.1E-28 190.5 10.0 229 50-305 2-324 (456)
85 1cjc_A Protein (adrenodoxin re 99.9 7.3E-24 2.5E-28 190.3 10.2 230 50-305 5-331 (460)
86 3vrd_B FCCB subunit, flavocyto 99.9 5.7E-23 1.9E-27 182.1 14.7 235 51-305 2-256 (401)
87 2gv8_A Monooxygenase; FMO, FAD 99.9 1.2E-22 4E-27 182.5 15.7 229 49-306 4-291 (447)
88 1o94_A Tmadh, trimethylamine d 99.9 1.3E-23 4.4E-28 198.8 9.8 256 13-305 347-644 (729)
89 2gag_A Heterotetrameric sarcos 99.9 1.7E-22 5.7E-27 196.2 15.2 225 51-305 128-381 (965)
90 1w4x_A Phenylacetone monooxyge 99.9 1.4E-21 4.8E-26 179.4 17.8 185 50-242 15-221 (542)
91 4b63_A L-ornithine N5 monooxyg 99.9 6.1E-21 2.1E-25 173.3 19.2 192 49-243 37-284 (501)
92 1gte_A Dihydropyrimidine dehyd 99.9 1.7E-21 5.8E-26 190.3 13.5 226 50-305 186-440 (1025)
93 1y56_A Hypothetical protein PH 99.9 3.3E-21 1.1E-25 174.8 12.4 194 51-305 108-311 (493)
94 4dgk_A Phytoene dehydrogenase; 99.4 1.2E-12 4.2E-17 118.9 12.8 56 248-304 220-275 (501)
95 3dme_A Conserved exported prot 99.4 8.3E-13 2.8E-17 115.0 10.7 57 248-305 149-207 (369)
96 2ywl_A Thioredoxin reductase r 99.3 3.4E-12 1.2E-16 99.8 7.9 107 52-175 2-111 (180)
97 3pvc_A TRNA 5-methylaminomethy 99.3 1.7E-10 5.7E-15 108.8 18.9 56 248-305 411-467 (689)
98 2gqf_A Hypothetical protein HI 99.3 7E-13 2.4E-17 116.9 1.3 122 50-175 3-169 (401)
99 3ps9_A TRNA 5-methylaminomethy 99.2 2.8E-10 9.7E-15 107.1 17.9 56 248-305 416-471 (676)
100 2gag_B Heterotetrameric sarcos 99.2 2.9E-11 1E-15 106.7 9.5 56 248-305 173-228 (405)
101 3nrn_A Uncharacterized protein 99.2 3.2E-11 1.1E-15 107.1 9.7 53 248-304 188-240 (421)
102 2ywl_A Thioredoxin reductase r 99.2 1.5E-10 5.3E-15 90.3 12.4 94 209-306 3-109 (180)
103 3nix_A Flavoprotein/dehydrogen 99.2 2.2E-10 7.7E-15 101.6 15.1 57 249-305 106-164 (421)
104 3axb_A Putative oxidoreductase 99.2 3.3E-11 1.1E-15 107.9 9.7 57 248-305 180-252 (448)
105 1y56_B Sarcosine oxidase; dehy 99.2 4.4E-11 1.5E-15 104.8 10.2 56 248-305 148-203 (382)
106 3dje_A Fructosyl amine: oxygen 99.2 6.9E-11 2.4E-15 105.5 11.4 57 248-305 160-219 (438)
107 2gf3_A MSOX, monomeric sarcosi 99.2 1.8E-10 6.1E-15 101.1 13.7 68 232-305 136-203 (389)
108 3nyc_A D-arginine dehydrogenas 99.2 6.2E-11 2.1E-15 103.7 9.5 55 248-305 153-207 (381)
109 1s3e_A Amine oxidase [flavin-c 99.2 4.3E-11 1.5E-15 109.3 7.5 51 250-305 216-266 (520)
110 3ka7_A Oxidoreductase; structu 99.2 3.5E-10 1.2E-14 100.5 13.0 55 248-304 195-249 (425)
111 2cul_A Glucose-inhibited divis 99.1 8.2E-11 2.8E-15 95.9 8.1 114 50-175 2-126 (232)
112 3i3l_A Alkylhalidase CMLS; fla 99.1 1.4E-10 4.7E-15 107.0 10.2 56 249-305 128-186 (591)
113 3alj_A 2-methyl-3-hydroxypyrid 99.1 4.9E-11 1.7E-15 104.5 6.6 123 49-175 9-161 (379)
114 1ryi_A Glycine oxidase; flavop 99.1 1.8E-10 6.2E-15 100.8 9.7 55 248-305 163-217 (382)
115 3v76_A Flavoprotein; structura 99.1 4.6E-11 1.6E-15 105.7 5.9 122 49-175 25-188 (417)
116 3cgv_A Geranylgeranyl reductas 99.1 1.2E-09 4.2E-14 96.0 14.3 55 250-305 103-160 (397)
117 3fpz_A Thiazole biosynthetic e 99.1 4.5E-12 1.5E-16 108.8 -1.6 150 50-241 64-217 (326)
118 3nlc_A Uncharacterized protein 99.1 3.5E-10 1.2E-14 103.0 10.2 123 50-175 106-278 (549)
119 3ces_A MNMG, tRNA uridine 5-ca 99.1 3.5E-10 1.2E-14 104.0 10.0 160 50-237 27-220 (651)
120 3fmw_A Oxygenase; mithramycin, 99.1 1.8E-10 6E-15 106.0 7.7 122 50-174 48-207 (570)
121 3i6d_A Protoporphyrinogen oxid 99.1 9.4E-10 3.2E-14 98.9 11.9 39 264-304 248-286 (470)
122 3k7m_X 6-hydroxy-L-nicotine ox 99.1 4.1E-11 1.4E-15 106.7 2.8 54 248-304 203-256 (431)
123 2i0z_A NAD(FAD)-utilizing dehy 99.0 2.9E-10 9.8E-15 101.8 7.8 122 50-174 25-191 (447)
124 2oln_A NIKD protein; flavoprot 99.0 3.7E-09 1.3E-13 93.0 14.8 55 248-305 152-206 (397)
125 1yvv_A Amine oxidase, flavin-c 99.0 7.9E-10 2.7E-14 94.9 10.2 36 51-89 2-37 (336)
126 2e4g_A Tryptophan halogenase; 99.0 1.7E-09 6E-14 99.2 12.2 57 248-305 193-250 (550)
127 4gde_A UDP-galactopyranose mut 99.0 3.5E-10 1.2E-14 102.9 6.9 53 248-304 221-273 (513)
128 2uzz_A N-methyl-L-tryptophan o 99.0 2.6E-09 8.9E-14 93.1 12.1 55 248-305 148-202 (372)
129 2vou_A 2,6-dihydroxypyridine h 99.0 1.7E-09 5.8E-14 95.3 10.2 124 49-175 3-154 (397)
130 2bry_A NEDD9 interacting prote 99.0 4.3E-10 1.5E-14 101.9 6.5 124 49-175 90-231 (497)
131 3rp8_A Flavoprotein monooxygen 99.0 3.4E-10 1.2E-14 100.1 5.7 125 48-175 20-182 (407)
132 3qj4_A Renalase; FAD/NAD(P)-bi 99.0 9.7E-10 3.3E-14 94.8 8.5 118 52-172 2-163 (342)
133 2cul_A Glucose-inhibited divis 99.0 4.5E-09 1.5E-13 85.5 12.0 96 208-305 4-123 (232)
134 2e5v_A L-aspartate oxidase; ar 99.0 2.2E-11 7.6E-16 109.6 -2.1 111 128-245 127-247 (472)
135 2x3n_A Probable FAD-dependent 99.0 5.1E-10 1.7E-14 98.7 6.6 122 51-175 6-167 (399)
136 1pj5_A N,N-dimethylglycine oxi 99.0 1.1E-09 3.9E-14 105.2 9.4 56 248-305 150-205 (830)
137 2vvm_A Monoamine oxidase N; FA 99.0 1.1E-08 3.6E-13 92.8 15.2 56 248-305 254-310 (495)
138 2qa1_A PGAE, polyketide oxygen 99.0 5E-10 1.7E-14 101.6 6.0 124 48-174 8-165 (500)
139 3oz2_A Digeranylgeranylglycero 98.9 7.3E-10 2.5E-14 97.1 6.0 38 49-89 2-39 (397)
140 2b9w_A Putative aminooxidase; 98.9 1.7E-10 5.9E-15 102.5 1.8 38 50-90 5-43 (424)
141 2qa2_A CABE, polyketide oxygen 98.9 1.1E-09 3.8E-14 99.2 7.1 123 49-174 10-166 (499)
142 2xdo_A TETX2 protein; tetracyc 98.9 5.8E-09 2E-13 91.9 11.4 124 49-175 24-183 (398)
143 3nks_A Protoporphyrinogen oxid 98.9 1.4E-09 4.8E-14 98.1 7.3 55 248-304 233-287 (477)
144 3da1_A Glycerol-3-phosphate de 98.9 1.5E-09 5E-14 99.8 7.4 57 248-305 169-230 (561)
145 3ihg_A RDME; flavoenzyme, anth 98.9 1.6E-09 5.5E-14 99.2 7.3 37 50-89 4-40 (535)
146 4at0_A 3-ketosteroid-delta4-5a 98.9 4.3E-09 1.5E-13 95.7 10.0 56 250-305 203-262 (510)
147 3p1w_A Rabgdi protein; GDI RAB 98.9 2.4E-10 8.1E-15 102.0 1.4 58 248-305 255-312 (475)
148 2zxi_A TRNA uridine 5-carboxym 98.9 3.8E-09 1.3E-13 96.9 9.1 159 51-237 27-219 (637)
149 1rp0_A ARA6, thiazole biosynth 98.9 2.5E-09 8.4E-14 89.8 6.9 121 50-175 38-192 (284)
150 3e1t_A Halogenase; flavoprotei 98.9 2.2E-09 7.6E-14 97.7 7.0 123 50-175 6-173 (512)
151 1y0p_A Fumarate reductase flav 98.9 5.3E-09 1.8E-13 96.5 9.2 37 50-89 125-161 (571)
152 1d4d_A Flavocytochrome C fumar 98.9 4.6E-08 1.6E-12 90.1 15.4 58 248-305 254-315 (572)
153 3jsk_A Cypbp37 protein; octame 98.9 3.9E-08 1.3E-12 83.9 13.6 36 51-89 79-116 (344)
154 3pl8_A Pyranose 2-oxidase; sub 98.9 1.7E-10 6E-15 107.0 -1.2 38 50-90 45-82 (623)
155 2gmh_A Electron transfer flavo 98.9 9.1E-09 3.1E-13 95.0 10.0 36 51-89 35-76 (584)
156 2gjc_A Thiazole biosynthetic e 98.8 8.3E-08 2.8E-12 81.3 14.5 37 50-89 64-102 (326)
157 4a9w_A Monooxygenase; baeyer-v 98.8 4E-08 1.4E-12 84.8 12.3 96 208-305 4-130 (357)
158 1k0i_A P-hydroxybenzoate hydro 98.8 3.5E-09 1.2E-13 93.0 5.6 122 51-175 2-164 (394)
159 3atr_A Conserved archaeal prot 98.8 6E-10 2.1E-14 99.9 0.5 122 51-175 6-163 (453)
160 3kkj_A Amine oxidase, flavin-c 98.8 4.5E-09 1.5E-13 87.2 5.7 36 51-89 2-37 (336)
161 1qo8_A Flavocytochrome C3 fuma 98.8 5.1E-09 1.7E-13 96.4 6.6 37 50-89 120-156 (566)
162 3nlc_A Uncharacterized protein 98.8 3.5E-08 1.2E-12 89.9 11.8 98 207-305 107-275 (549)
163 2bry_A NEDD9 interacting prote 98.8 1.8E-09 6E-14 97.9 2.8 100 206-305 91-228 (497)
164 3lzw_A Ferredoxin--NADP reduct 98.8 5.2E-08 1.8E-12 83.3 11.3 96 208-305 8-121 (332)
165 2wdq_A Succinate dehydrogenase 98.7 5.9E-08 2E-12 89.6 11.5 57 249-305 143-204 (588)
166 2qcu_A Aerobic glycerol-3-phos 98.7 3.6E-08 1.2E-12 89.4 9.9 36 50-88 2-37 (501)
167 4hb9_A Similarities with proba 98.7 1.4E-08 5E-13 89.4 7.0 35 52-89 2-36 (412)
168 3cp8_A TRNA uridine 5-carboxym 98.7 1.6E-08 5.3E-13 93.1 6.8 123 49-175 19-175 (641)
169 3v76_A Flavoprotein; structura 98.7 9.3E-08 3.2E-12 84.5 11.5 96 207-305 27-185 (417)
170 3ab1_A Ferredoxin--NADP reduct 98.7 1.6E-07 5.4E-12 81.4 12.6 98 207-305 14-129 (360)
171 2yqu_A 2-oxoglutarate dehydrog 98.7 2.8E-08 9.6E-13 89.1 8.1 98 51-176 167-266 (455)
172 3c96_A Flavin-containing monoo 98.7 1.4E-08 4.7E-13 89.8 5.4 37 50-89 3-40 (410)
173 2weu_A Tryptophan 5-halogenase 98.7 1.9E-07 6.5E-12 84.9 13.0 57 248-305 172-228 (511)
174 2zbw_A Thioredoxin reductase; 98.7 2.1E-07 7.1E-12 79.7 12.2 96 208-305 6-119 (335)
175 2rgh_A Alpha-glycerophosphate 98.7 2.8E-08 9.6E-13 91.5 7.0 57 248-305 187-248 (571)
176 1rp0_A ARA6, thiazole biosynth 98.7 2.1E-07 7.2E-12 78.0 11.7 97 208-305 40-189 (284)
177 2gqw_A Ferredoxin reductase; f 98.7 6.9E-08 2.4E-12 85.2 9.1 96 51-175 145-240 (408)
178 3c4n_A Uncharacterized protein 98.7 5.7E-09 1.9E-13 92.2 1.9 35 51-88 36-72 (405)
179 3itj_A Thioredoxin reductase 1 98.6 2.7E-07 9.2E-12 79.0 12.2 97 206-305 21-140 (338)
180 2v3a_A Rubredoxin reductase; a 98.6 6.6E-08 2.3E-12 84.7 8.5 98 51-175 145-244 (384)
181 2aqj_A Tryptophan halogenase, 98.6 3.2E-08 1.1E-12 90.6 6.6 36 50-88 4-42 (538)
182 1ges_A Glutathione reductase; 98.6 6.6E-08 2.3E-12 86.5 8.4 98 51-176 167-267 (450)
183 3f8d_A Thioredoxin reductase ( 98.6 3.1E-07 1.1E-11 78.0 12.1 95 208-305 16-123 (323)
184 1xhc_A NADH oxidase /nitrite r 98.6 7.7E-08 2.6E-12 83.7 8.1 92 52-175 144-235 (367)
185 1kf6_A Fumarate reductase flav 98.6 1.9E-07 6.3E-12 86.5 11.0 35 51-88 5-41 (602)
186 1nhp_A NADH peroxidase; oxidor 98.6 1.1E-07 3.7E-12 85.0 9.2 98 50-175 148-247 (447)
187 2r9z_A Glutathione amide reduc 98.6 7.7E-08 2.6E-12 86.4 8.1 98 51-176 166-266 (463)
188 2i0z_A NAD(FAD)-utilizing dehy 98.6 4.4E-07 1.5E-11 81.1 12.7 97 208-305 27-189 (447)
189 3klj_A NAD(FAD)-dependent dehy 98.6 4.2E-07 1.4E-11 79.5 12.2 95 207-305 9-114 (385)
190 4eqs_A Coenzyme A disulfide re 98.6 1.7E-07 5.7E-12 83.5 9.7 95 51-175 147-241 (437)
191 2gqf_A Hypothetical protein HI 98.6 5E-07 1.7E-11 79.4 12.6 96 208-305 5-166 (401)
192 2eq6_A Pyruvate dehydrogenase 98.6 8E-08 2.7E-12 86.3 7.6 98 51-176 169-273 (464)
193 3gwf_A Cyclohexanone monooxyge 98.6 3.4E-07 1.2E-11 83.6 11.9 98 208-305 9-145 (540)
194 1lvl_A Dihydrolipoamide dehydr 98.6 6.9E-08 2.4E-12 86.6 7.1 97 51-176 171-270 (458)
195 2r0c_A REBC; flavin adenine di 98.6 5.4E-08 1.9E-12 89.2 6.5 36 51-89 26-61 (549)
196 3alj_A 2-methyl-3-hydroxypyrid 98.6 6.5E-07 2.2E-11 78.2 13.0 94 207-305 11-158 (379)
197 4ap3_A Steroid monooxygenase; 98.6 3.7E-07 1.2E-11 83.6 11.8 98 207-304 21-156 (549)
198 1qo8_A Flavocytochrome C3 fuma 98.6 3.8E-07 1.3E-11 83.9 12.0 98 208-305 122-310 (566)
199 3ef6_A Toluene 1,2-dioxygenase 98.6 8.1E-08 2.8E-12 84.9 7.2 98 51-175 143-242 (410)
200 2dkh_A 3-hydroxybenzoate hydro 98.6 6.5E-08 2.2E-12 90.3 6.7 36 51-89 32-68 (639)
201 3lxd_A FAD-dependent pyridine 98.6 2.2E-07 7.5E-12 82.2 9.6 98 51-175 152-252 (415)
202 1onf_A GR, grase, glutathione 98.6 1.9E-07 6.4E-12 84.7 9.3 98 51-176 176-277 (500)
203 2h88_A Succinate dehydrogenase 98.6 5.5E-07 1.9E-11 83.4 12.2 56 249-305 155-215 (621)
204 1ebd_A E3BD, dihydrolipoamide 98.6 8.7E-08 3E-12 85.8 6.7 99 50-176 169-272 (455)
205 2hqm_A GR, grase, glutathione 98.5 1.7E-07 5.7E-12 84.6 8.4 99 50-176 184-287 (479)
206 3d1c_A Flavin-containing putat 98.5 9.6E-07 3.3E-11 76.6 13.0 94 208-305 5-141 (369)
207 3ics_A Coenzyme A-disulfide re 98.5 1.8E-07 6.3E-12 86.5 8.8 97 51-175 187-283 (588)
208 2q0l_A TRXR, thioredoxin reduc 98.5 9.2E-07 3.1E-11 74.8 12.4 94 209-305 3-112 (311)
209 1fl2_A Alkyl hydroperoxide red 98.5 1.1E-06 3.7E-11 74.3 12.4 96 209-305 3-113 (310)
210 1fec_A Trypanothione reductase 98.5 2.4E-07 8.1E-12 83.8 8.7 98 51-176 187-290 (490)
211 1ojt_A Surface protein; redox- 98.5 1.3E-07 4.4E-12 85.4 6.9 98 51-176 185-288 (482)
212 2wpf_A Trypanothione reductase 98.5 2.4E-07 8.2E-12 83.8 8.7 98 51-176 191-294 (495)
213 1y0p_A Fumarate reductase flav 98.5 9.9E-07 3.4E-11 81.3 12.9 98 208-305 127-315 (571)
214 3hyw_A Sulfide-quinone reducta 98.5 6.4E-08 2.2E-12 86.1 4.8 94 207-305 2-107 (430)
215 3fg2_P Putative rubredoxin red 98.5 2.7E-07 9.3E-12 81.3 8.6 98 51-175 142-242 (404)
216 1mo9_A ORF3; nucleotide bindin 98.5 2.6E-07 8.9E-12 84.2 8.6 97 52-176 215-318 (523)
217 2q7v_A Thioredoxin reductase; 98.5 1.3E-06 4.6E-11 74.4 12.6 96 208-305 9-121 (325)
218 2x3n_A Probable FAD-dependent 98.5 1.1E-06 3.6E-11 77.3 12.2 97 208-305 7-164 (399)
219 3fbs_A Oxidoreductase; structu 98.5 1.1E-06 3.8E-11 73.6 11.9 95 208-305 3-110 (297)
220 1vdc_A NTR, NADPH dependent th 98.5 8.6E-07 2.9E-11 75.8 11.1 94 208-305 9-122 (333)
221 3uox_A Otemo; baeyer-villiger 98.5 5.7E-07 1.9E-11 82.3 10.3 97 208-304 10-144 (545)
222 1q1r_A Putidaredoxin reductase 98.5 3.5E-07 1.2E-11 81.3 8.7 98 51-175 149-251 (431)
223 1zmd_A Dihydrolipoyl dehydroge 98.5 3E-07 1E-11 82.8 8.3 99 51-176 178-284 (474)
224 1chu_A Protein (L-aspartate ox 98.5 6.8E-07 2.3E-11 81.7 10.7 35 51-89 8-42 (540)
225 1v59_A Dihydrolipoamide dehydr 98.5 1.9E-07 6.7E-12 84.1 7.0 98 51-176 183-289 (478)
226 2bc0_A NADH oxidase; flavoprot 98.5 4.6E-07 1.6E-11 81.9 9.1 98 50-175 193-292 (490)
227 2a8x_A Dihydrolipoyl dehydroge 98.5 2.7E-07 9.2E-12 82.9 7.4 98 51-176 171-273 (464)
228 2xve_A Flavin-containing monoo 98.5 1.4E-06 4.9E-11 78.1 12.1 96 208-304 3-163 (464)
229 4b1b_A TRXR, thioredoxin reduc 98.5 3.6E-07 1.2E-11 83.3 8.2 97 50-175 222-320 (542)
230 3sx6_A Sulfide-quinone reducta 98.4 3.5E-07 1.2E-11 81.5 7.8 93 208-305 5-110 (437)
231 1xdi_A RV3303C-LPDA; reductase 98.4 4.4E-07 1.5E-11 82.3 8.4 98 51-176 182-281 (499)
232 1yvv_A Amine oxidase, flavin-c 98.4 3.4E-06 1.2E-10 72.1 13.2 94 208-304 3-159 (336)
233 4fk1_A Putative thioredoxin re 98.4 2.6E-06 8.9E-11 71.9 12.2 96 209-305 8-115 (304)
234 3iwa_A FAD-dependent pyridine 98.4 4.6E-07 1.6E-11 81.5 7.9 98 51-175 159-259 (472)
235 3oc4_A Oxidoreductase, pyridin 98.4 1.1E-06 3.6E-11 78.7 10.1 98 51-176 147-246 (452)
236 3cgb_A Pyridine nucleotide-dis 98.4 4E-07 1.4E-11 82.1 7.3 97 50-175 185-283 (480)
237 2qae_A Lipoamide, dihydrolipoy 98.4 4.7E-07 1.6E-11 81.4 7.7 99 50-176 173-278 (468)
238 2gv8_A Monooxygenase; FMO, FAD 98.4 1.2E-06 4.1E-11 78.2 10.3 97 207-305 6-175 (447)
239 3o0h_A Glutathione reductase; 98.4 6E-07 2.1E-11 81.0 8.4 98 51-176 191-290 (484)
240 3vrd_B FCCB subunit, flavocyto 98.4 1.4E-06 4.8E-11 76.6 10.6 94 207-305 2-106 (401)
241 2cdu_A NADPH oxidase; flavoenz 98.4 6E-07 2.1E-11 80.3 8.3 97 51-175 149-248 (452)
242 3ntd_A FAD-dependent pyridine 98.4 7.5E-07 2.6E-11 82.0 8.9 97 51-175 151-268 (565)
243 1trb_A Thioredoxin reductase; 98.4 3.2E-06 1.1E-10 71.7 12.0 94 208-305 6-114 (320)
244 3qj4_A Renalase; FAD/NAD(P)-bi 98.4 1.3E-06 4.5E-11 75.1 9.6 94 209-304 3-162 (342)
245 1dxl_A Dihydrolipoamide dehydr 98.4 2.7E-07 9.3E-12 83.0 5.5 99 50-176 176-281 (470)
246 2a87_A TRXR, TR, thioredoxin r 98.4 3E-06 1E-10 72.5 11.5 95 207-305 14-124 (335)
247 1hyu_A AHPF, alkyl hydroperoxi 98.4 3.7E-06 1.2E-10 76.6 12.6 98 207-305 212-324 (521)
248 3cty_A Thioredoxin reductase; 98.4 4.5E-06 1.5E-10 70.9 12.2 95 207-305 16-124 (319)
249 3lad_A Dihydrolipoamide dehydr 98.4 9.4E-07 3.2E-11 79.6 8.4 99 50-176 179-282 (476)
250 3ces_A MNMG, tRNA uridine 5-ca 98.4 4.1E-06 1.4E-10 77.2 12.6 96 208-305 29-179 (651)
251 4gut_A Lysine-specific histone 98.4 2.8E-06 9.5E-11 80.6 11.8 38 49-89 334-371 (776)
252 4dna_A Probable glutathione re 98.3 1.1E-06 3.9E-11 78.8 8.5 97 51-176 170-270 (463)
253 1zk7_A HGII, reductase, mercur 98.3 9.6E-07 3.3E-11 79.3 8.1 95 51-175 176-272 (467)
254 3ic9_A Dihydrolipoamide dehydr 98.3 9.4E-07 3.2E-11 79.9 7.9 97 51-176 174-276 (492)
255 3urh_A Dihydrolipoyl dehydroge 98.3 8.1E-07 2.8E-11 80.3 7.5 99 50-176 197-302 (491)
256 1k0i_A P-hydroxybenzoate hydro 98.3 4.1E-06 1.4E-10 73.3 11.8 97 208-305 3-161 (394)
257 2zxi_A TRNA uridine 5-carboxym 98.3 5.1E-06 1.8E-10 76.3 12.4 96 208-305 28-178 (637)
258 3atr_A Conserved archaeal prot 98.3 4.7E-06 1.6E-10 74.5 11.7 97 208-305 7-160 (453)
259 3h8l_A NADH oxidase; membrane 98.3 8.7E-07 3E-11 78.2 6.5 93 208-305 2-111 (409)
260 3h28_A Sulfide-quinone reducta 98.3 5.7E-07 2E-11 79.9 5.4 93 208-305 3-107 (430)
261 1c0p_A D-amino acid oxidase; a 98.3 6.9E-07 2.4E-11 77.5 5.6 36 49-87 4-39 (363)
262 1w4x_A Phenylacetone monooxyge 98.3 6.7E-06 2.3E-10 75.2 12.2 97 208-305 17-152 (542)
263 2e1m_A L-glutamate oxidase; L- 98.3 8E-07 2.7E-11 77.1 5.7 38 49-89 42-80 (376)
264 3kd9_A Coenzyme A disulfide re 98.3 1.8E-06 6.2E-11 77.1 8.2 98 50-175 147-245 (449)
265 1pn0_A Phenol 2-monooxygenase; 98.3 5E-07 1.7E-11 84.6 4.7 35 51-88 8-47 (665)
266 3dk9_A Grase, GR, glutathione 98.3 1.3E-06 4.5E-11 78.6 7.3 98 51-176 187-295 (478)
267 3cp8_A TRNA uridine 5-carboxym 98.3 7.1E-06 2.4E-10 75.6 12.1 107 197-305 11-172 (641)
268 2vou_A 2,6-dihydroxypyridine h 98.3 4.7E-06 1.6E-10 73.2 10.6 97 207-305 5-151 (397)
269 1rsg_A FMS1 protein; FAD bindi 98.3 4.3E-07 1.5E-11 82.6 4.0 38 50-90 7-45 (516)
270 1m6i_A Programmed cell death p 98.3 1.9E-06 6.4E-11 78.0 8.1 99 51-176 180-284 (493)
271 2gmh_A Electron transfer flavo 98.3 1.3E-05 4.4E-10 74.0 13.6 98 208-305 36-215 (584)
272 2bcg_G Secretory pathway GDP d 98.3 9.9E-07 3.4E-11 78.9 5.9 57 248-305 241-298 (453)
273 4a5l_A Thioredoxin reductase; 98.2 1.3E-05 4.5E-10 67.7 12.5 94 209-305 6-119 (314)
274 3ihm_A Styrene monooxygenase A 98.2 6.5E-07 2.2E-11 79.6 4.4 35 50-87 21-55 (430)
275 3s5w_A L-ornithine 5-monooxyge 98.2 3.1E-06 1.1E-10 75.8 8.7 97 209-305 32-190 (463)
276 1v0j_A UDP-galactopyranose mut 98.2 1.2E-06 4.2E-11 77.0 5.8 38 50-90 6-44 (399)
277 3e1t_A Halogenase; flavoprotei 98.2 1.5E-05 5E-10 72.5 13.0 97 208-305 8-170 (512)
278 3hdq_A UDP-galactopyranose mut 98.2 1.4E-06 4.8E-11 76.2 5.6 39 49-90 27-65 (397)
279 2jae_A L-amino acid oxidase; o 98.2 1.5E-06 5.3E-11 78.4 5.9 39 49-90 9-47 (489)
280 3lov_A Protoporphyrinogen oxid 98.2 1.2E-06 4E-11 78.9 5.1 39 50-89 3-41 (475)
281 2yg5_A Putrescine oxidase; oxi 98.2 8.9E-07 3.1E-11 79.1 4.1 38 50-90 4-41 (453)
282 2ivd_A PPO, PPOX, protoporphyr 98.2 1.4E-06 4.9E-11 78.3 4.9 39 49-90 14-52 (478)
283 3dgh_A TRXR-1, thioredoxin red 98.1 2.4E-06 8.1E-11 77.1 6.2 96 51-175 187-290 (483)
284 3rp8_A Flavoprotein monooxygen 98.1 1.5E-05 5E-10 70.2 11.1 95 207-305 23-179 (407)
285 3fmw_A Oxygenase; mithramycin, 98.1 1.2E-05 4.1E-10 73.9 10.8 98 208-305 50-205 (570)
286 3ihg_A RDME; flavoenzyme, anth 98.1 1.8E-05 6E-10 72.3 11.6 97 208-305 6-181 (535)
287 3r9u_A Thioredoxin reductase; 98.1 1E-05 3.5E-10 68.2 9.4 94 207-305 4-116 (315)
288 3dgz_A Thioredoxin reductase 2 98.1 5.8E-06 2E-10 74.7 7.5 97 51-176 185-289 (488)
289 1sez_A Protoporphyrinogen oxid 98.1 2.5E-06 8.6E-11 77.3 5.2 38 50-90 12-49 (504)
290 3g3e_A D-amino-acid oxidase; F 98.1 1.8E-06 6.3E-11 74.4 4.1 36 52-87 1-39 (351)
291 4dsg_A UDP-galactopyranose mut 98.1 3.5E-06 1.2E-10 76.0 5.8 39 49-90 7-46 (484)
292 4g6h_A Rotenone-insensitive NA 98.1 4.7E-06 1.6E-10 75.4 6.6 99 52-175 218-333 (502)
293 2bi7_A UDP-galactopyranose mut 98.1 3.2E-06 1.1E-10 73.9 5.3 37 51-90 3-39 (384)
294 3l8k_A Dihydrolipoyl dehydroge 98.1 6.4E-06 2.2E-10 73.9 6.9 96 50-176 171-274 (466)
295 3c4a_A Probable tryptophan hyd 98.0 3.2E-06 1.1E-10 73.8 4.9 35 52-89 1-37 (381)
296 4hb9_A Similarities with proba 98.0 2.7E-05 9.1E-10 68.3 10.5 96 209-305 3-164 (412)
297 1i8t_A UDP-galactopyranose mut 98.0 3.3E-06 1.1E-10 73.4 4.5 36 52-90 2-37 (367)
298 2iid_A L-amino-acid oxidase; f 98.0 4.3E-06 1.5E-10 75.7 5.5 39 49-90 31-69 (498)
299 2xdo_A TETX2 protein; tetracyc 98.0 2.8E-05 9.7E-10 68.2 10.5 97 207-305 26-180 (398)
300 3oz2_A Digeranylgeranylglycero 98.0 4.4E-05 1.5E-09 66.5 11.7 96 209-305 6-160 (397)
301 3k30_A Histamine dehydrogenase 98.0 8.5E-06 2.9E-10 76.7 7.3 98 51-175 523-625 (690)
302 4gcm_A TRXR, thioredoxin reduc 98.0 8.1E-05 2.8E-09 62.8 12.5 93 209-305 8-114 (312)
303 2qa2_A CABE, polyketide oxygen 98.0 7.6E-05 2.6E-09 67.5 13.0 97 207-305 12-164 (499)
304 2aqj_A Tryptophan halogenase, 98.0 0.00011 3.7E-09 67.1 14.2 52 253-305 169-220 (538)
305 2pyx_A Tryptophan halogenase; 98.0 4.4E-06 1.5E-10 76.2 4.8 36 50-88 6-53 (526)
306 3c4n_A Uncharacterized protein 98.0 1.8E-05 6.3E-10 69.6 8.5 52 251-305 174-234 (405)
307 3qfa_A Thioredoxin reductase 1 98.0 1.5E-05 5.2E-10 72.5 7.9 97 51-176 210-317 (519)
308 2x8g_A Thioredoxin glutathione 98.0 1.8E-05 6.2E-10 73.3 8.3 97 51-176 286-397 (598)
309 2vdc_G Glutamate synthase [NAD 97.9 9.2E-06 3.1E-10 72.6 5.9 89 206-305 121-217 (456)
310 2qa1_A PGAE, polyketide oxygen 97.9 9.1E-05 3.1E-09 67.0 12.4 98 206-305 10-163 (500)
311 1d5t_A Guanine nucleotide diss 97.9 1E-05 3.5E-10 71.9 5.9 56 248-305 233-288 (433)
312 3g5s_A Methylenetetrahydrofola 97.9 9.7E-06 3.3E-10 69.9 5.4 35 51-88 1-35 (443)
313 3c96_A Flavin-containing monoo 97.9 6.5E-05 2.2E-09 66.1 10.7 95 208-305 5-167 (410)
314 1y56_A Hypothetical protein PH 97.9 2E-05 6.8E-10 71.2 7.2 96 207-305 108-217 (493)
315 2bs2_A Quinol-fumarate reducta 97.8 9.2E-06 3.1E-10 75.8 4.1 35 51-88 5-39 (660)
316 2gag_A Heterotetrameric sarcos 97.8 0.00013 4.6E-09 71.1 12.0 97 207-305 128-251 (965)
317 2pyx_A Tryptophan halogenase; 97.8 0.00033 1.1E-08 63.7 13.3 52 253-305 179-231 (526)
318 1ps9_A 2,4-dienoyl-COA reducta 97.8 3.9E-05 1.3E-09 72.0 7.2 48 127-175 580-629 (671)
319 2qcu_A Aerobic glycerol-3-phos 97.8 0.00024 8.1E-09 64.3 11.9 53 251-305 151-208 (501)
320 2z3y_A Lysine-specific histone 97.8 2.6E-05 8.9E-10 73.1 5.8 38 49-89 105-142 (662)
321 3gyx_A Adenylylsulfate reducta 97.8 2.1E-05 7.2E-10 73.4 5.0 35 51-88 22-62 (662)
322 2xag_A Lysine-specific histone 97.7 3.3E-05 1.1E-09 74.0 6.1 39 49-90 276-314 (852)
323 2e5v_A L-aspartate oxidase; ar 97.7 0.00018 6E-09 64.6 10.6 95 209-305 1-174 (472)
324 1jnr_A Adenylylsulfate reducta 97.7 2.7E-05 9.3E-10 72.6 4.9 35 51-88 22-60 (643)
325 1kdg_A CDH, cellobiose dehydro 97.7 3.3E-05 1.1E-09 70.7 4.9 37 49-88 5-41 (546)
326 1o94_A Tmadh, trimethylamine d 97.7 3.6E-05 1.2E-09 72.9 5.3 97 51-175 528-647 (729)
327 1b37_A Protein (polyamine oxid 97.7 4.1E-05 1.4E-09 68.7 5.3 53 250-304 207-267 (472)
328 1kf6_A Fumarate reductase flav 97.6 0.00035 1.2E-08 64.6 11.1 96 209-305 7-195 (602)
329 1gte_A Dihydropyrimidine dehyd 97.6 3.5E-05 1.2E-09 75.6 4.4 90 207-305 187-285 (1025)
330 1cjc_A Protein (adrenodoxin re 97.6 2.6E-05 8.9E-10 69.8 3.0 88 207-305 6-104 (460)
331 1lqt_A FPRA; NADP+ derivative, 97.6 1.7E-05 6E-10 70.8 1.9 88 207-305 3-106 (456)
332 3ayj_A Pro-enzyme of L-phenyla 97.6 3.1E-05 1.1E-09 72.3 3.3 36 51-89 56-100 (721)
333 3t37_A Probable dehydrogenase; 97.5 4.6E-05 1.6E-09 69.4 3.8 35 51-88 17-52 (526)
334 1ju2_A HydroxynitrIle lyase; f 97.4 6.1E-05 2.1E-09 68.7 3.2 35 50-88 25-59 (536)
335 1chu_A Protein (L-aspartate ox 97.4 0.00046 1.6E-08 62.9 8.9 33 208-241 9-41 (540)
336 3q9t_A Choline dehydrogenase a 97.4 8.5E-05 2.9E-09 68.2 4.0 37 50-88 5-41 (577)
337 2bs2_A Quinol-fumarate reducta 97.4 0.0019 6.6E-08 60.2 12.8 52 253-305 162-218 (660)
338 2dkh_A 3-hydroxybenzoate hydro 97.4 0.0011 3.7E-08 61.9 11.2 97 208-305 33-209 (639)
339 3qvp_A Glucose oxidase; oxidor 97.3 0.00013 4.4E-09 67.0 3.8 36 49-87 17-53 (583)
340 1n4w_A CHOD, cholesterol oxida 97.3 0.00016 5.5E-09 65.5 4.4 37 50-89 4-40 (504)
341 2r0c_A REBC; flavin adenine di 97.3 0.0024 8.1E-08 58.4 12.1 93 208-305 27-194 (549)
342 1coy_A Cholesterol oxidase; ox 97.3 0.00022 7.6E-09 64.5 5.0 36 50-88 10-45 (507)
343 4gut_A Lysine-specific histone 97.2 0.0016 5.5E-08 61.9 10.7 41 262-304 542-582 (776)
344 3c4a_A Probable tryptophan hyd 97.2 0.00033 1.1E-08 60.9 5.6 84 209-305 2-141 (381)
345 1gpe_A Protein (glucose oxidas 97.2 0.00028 9.7E-09 65.0 4.6 37 50-89 23-60 (587)
346 2jbv_A Choline oxidase; alcoho 97.1 0.00027 9.1E-09 64.6 4.1 46 259-304 219-270 (546)
347 3fim_B ARYL-alcohol oxidase; A 97.1 0.00018 6.3E-09 65.8 2.6 36 51-89 2-38 (566)
348 3fwz_A Inner membrane protein 97.0 0.0013 4.4E-08 48.4 5.8 37 49-88 5-41 (140)
349 1pn0_A Phenol 2-monooxygenase; 96.9 0.0071 2.4E-07 56.6 11.5 32 209-240 10-46 (665)
350 1jnr_A Adenylylsulfate reducta 96.9 0.0071 2.4E-07 56.4 11.4 51 255-305 157-216 (643)
351 1id1_A Putative potassium chan 96.7 0.0023 7.7E-08 47.8 5.6 34 50-86 2-35 (153)
352 2g1u_A Hypothetical protein TM 96.7 0.002 6.9E-08 48.2 5.1 36 50-88 18-53 (155)
353 3llv_A Exopolyphosphatase-rela 96.7 0.0022 7.5E-08 47.1 5.2 34 51-87 6-39 (141)
354 1vg0_A RAB proteins geranylger 96.6 0.0025 8.5E-08 58.9 5.9 56 248-303 377-433 (650)
355 3gyx_A Adenylylsulfate reducta 96.5 0.01 3.5E-07 55.4 9.0 51 255-305 172-231 (662)
356 4b63_A L-ornithine N5 monooxyg 96.4 0.021 7.2E-07 51.4 10.8 55 250-305 146-212 (501)
357 1lss_A TRK system potassium up 96.4 0.0039 1.3E-07 45.4 4.9 33 52-87 5-37 (140)
358 3ic5_A Putative saccharopine d 96.4 0.0037 1.2E-07 44.1 4.4 34 51-87 5-39 (118)
359 2hmt_A YUAA protein; RCK, KTN, 96.2 0.0053 1.8E-07 44.9 4.7 34 51-87 6-39 (144)
360 2bcg_G Secretory pathway GDP d 96.1 0.0091 3.1E-07 53.1 6.6 38 50-90 10-47 (453)
361 3c85_A Putative glutathione-re 96.1 0.0079 2.7E-07 46.2 5.5 35 50-87 38-73 (183)
362 1d5t_A Guanine nucleotide diss 96.0 0.0075 2.6E-07 53.3 5.4 38 50-90 5-42 (433)
363 3dfz_A SIRC, precorrin-2 dehyd 95.9 0.01 3.5E-07 47.2 5.0 36 49-87 29-64 (223)
364 1vg0_A RAB proteins geranylger 95.8 0.031 1.1E-06 51.7 8.8 38 50-90 7-44 (650)
365 3kkj_A Amine oxidase, flavin-c 95.6 0.014 4.7E-07 47.3 5.3 35 208-242 3-37 (336)
366 3lk7_A UDP-N-acetylmuramoylala 95.6 0.014 4.7E-07 51.9 5.3 35 50-87 8-42 (451)
367 1kyq_A Met8P, siroheme biosynt 95.5 0.0083 2.8E-07 49.3 3.4 36 49-87 11-46 (274)
368 3l4b_C TRKA K+ channel protien 95.5 0.014 4.8E-07 46.3 4.5 33 53-88 2-34 (218)
369 2x5o_A UDP-N-acetylmuramoylala 95.4 0.01 3.6E-07 52.5 4.0 36 51-89 5-40 (439)
370 4e12_A Diketoreductase; oxidor 95.4 0.019 6.7E-07 47.5 5.3 36 50-88 3-38 (283)
371 1f0y_A HCDH, L-3-hydroxyacyl-C 95.3 0.022 7.4E-07 47.7 5.5 34 51-87 15-48 (302)
372 3k96_A Glycerol-3-phosphate de 95.2 0.023 7.9E-07 48.7 5.2 37 49-88 27-63 (356)
373 3i83_A 2-dehydropantoate 2-red 94.9 0.029 9.8E-07 47.4 5.0 33 52-87 3-35 (320)
374 3eag_A UDP-N-acetylmuramate:L- 94.9 0.03 1E-06 47.4 5.1 35 51-88 4-39 (326)
375 4dio_A NAD(P) transhydrogenase 94.8 0.036 1.2E-06 48.1 5.4 36 50-88 189-224 (405)
376 1jw9_B Molybdopterin biosynthe 94.8 0.032 1.1E-06 45.3 4.8 36 51-88 31-66 (249)
377 1b37_A Protein (polyamine oxid 94.7 0.038 1.3E-06 49.3 5.5 39 50-90 3-41 (472)
378 4ffl_A PYLC; amino acid, biosy 94.7 0.038 1.3E-06 47.5 5.3 36 51-89 1-36 (363)
379 1bg6_A N-(1-D-carboxylethyl)-L 94.7 0.035 1.2E-06 47.5 5.1 34 51-87 4-37 (359)
380 3ghy_A Ketopantoate reductase 94.7 0.038 1.3E-06 46.9 5.2 33 51-86 3-35 (335)
381 4dgk_A Phytoene dehydrogenase; 94.6 0.026 9.1E-07 50.6 4.3 37 208-244 2-38 (501)
382 2ew2_A 2-dehydropantoate 2-red 94.6 0.037 1.3E-06 46.4 4.9 33 52-87 4-36 (316)
383 3hn2_A 2-dehydropantoate 2-red 94.6 0.034 1.2E-06 46.7 4.7 33 52-87 3-35 (312)
384 2dpo_A L-gulonate 3-dehydrogen 94.6 0.041 1.4E-06 46.4 5.1 36 50-88 5-40 (319)
385 3doj_A AT3G25530, dehydrogenas 94.6 0.042 1.4E-06 46.1 5.2 37 49-88 19-55 (310)
386 3p2y_A Alanine dehydrogenase/p 94.5 0.037 1.3E-06 47.6 4.8 36 50-88 183-218 (381)
387 1vl6_A Malate oxidoreductase; 94.5 0.046 1.6E-06 46.9 5.3 36 49-86 190-225 (388)
388 3gpi_A NAD-dependent epimerase 94.5 0.055 1.9E-06 44.6 5.6 35 51-88 3-37 (286)
389 2raf_A Putative dinucleotide-b 94.4 0.054 1.8E-06 42.6 5.1 35 51-88 19-53 (209)
390 4g65_A TRK system potassium up 94.3 0.018 6E-07 51.3 2.4 34 52-88 4-37 (461)
391 2a9f_A Putative malic enzyme ( 94.3 0.053 1.8E-06 46.6 5.2 36 50-87 187-222 (398)
392 3l9w_A Glutathione-regulated p 94.2 0.053 1.8E-06 47.5 5.2 35 51-88 4-38 (413)
393 1pzg_A LDH, lactate dehydrogen 94.1 0.072 2.5E-06 45.2 5.7 35 51-87 9-43 (331)
394 3ado_A Lambda-crystallin; L-gu 94.1 0.06 2E-06 45.3 5.1 35 51-88 6-40 (319)
395 3gg2_A Sugar dehydrogenase, UD 94.1 0.056 1.9E-06 47.9 5.1 33 52-87 3-35 (450)
396 4huj_A Uncharacterized protein 94.1 0.04 1.4E-06 43.7 3.8 36 49-87 21-57 (220)
397 3dtt_A NADP oxidoreductase; st 94.1 0.064 2.2E-06 43.3 5.0 37 49-88 17-53 (245)
398 3vtf_A UDP-glucose 6-dehydroge 94.0 0.067 2.3E-06 47.1 5.4 36 49-87 19-54 (444)
399 3gvi_A Malate dehydrogenase; N 94.0 0.073 2.5E-06 44.9 5.4 38 48-87 4-41 (324)
400 1ks9_A KPA reductase;, 2-dehyd 94.0 0.063 2.2E-06 44.3 5.0 33 53-88 2-34 (291)
401 3g17_A Similar to 2-dehydropan 94.0 0.05 1.7E-06 45.3 4.4 33 52-87 3-35 (294)
402 2vns_A Metalloreductase steap3 93.9 0.072 2.4E-06 42.1 5.0 35 50-87 27-61 (215)
403 3e8x_A Putative NAD-dependent 93.9 0.065 2.2E-06 42.8 4.8 36 49-87 19-55 (236)
404 4e21_A 6-phosphogluconate dehy 93.9 0.068 2.3E-06 45.8 5.1 38 48-88 19-56 (358)
405 3tl2_A Malate dehydrogenase; c 93.8 0.081 2.8E-06 44.5 5.4 36 49-86 6-41 (315)
406 3ius_A Uncharacterized conserv 93.8 0.054 1.8E-06 44.6 4.3 35 51-88 5-39 (286)
407 1x13_A NAD(P) transhydrogenase 93.8 0.069 2.3E-06 46.6 5.0 35 51-88 172-206 (401)
408 1pjq_A CYSG, siroheme synthase 93.8 0.057 2E-06 48.0 4.6 35 50-87 11-45 (457)
409 3dfz_A SIRC, precorrin-2 dehyd 93.8 0.085 2.9E-06 41.9 5.1 34 206-239 30-63 (223)
410 1zud_1 Adenylyltransferase THI 93.8 0.07 2.4E-06 43.3 4.8 37 50-88 27-63 (251)
411 3i83_A 2-dehydropantoate 2-red 93.8 0.17 5.7E-06 42.6 7.3 32 208-239 3-34 (320)
412 3rui_A Ubiquitin-like modifier 93.7 0.082 2.8E-06 44.7 5.2 37 50-88 33-69 (340)
413 2y0c_A BCEC, UDP-glucose dehyd 93.7 0.07 2.4E-06 47.7 5.1 34 51-87 8-41 (478)
414 3g0o_A 3-hydroxyisobutyrate de 93.7 0.077 2.6E-06 44.3 5.1 36 50-88 6-41 (303)
415 3d0o_A L-LDH 1, L-lactate dehy 93.7 0.086 2.9E-06 44.4 5.3 37 49-86 4-40 (317)
416 3qha_A Putative oxidoreductase 93.7 0.058 2E-06 44.9 4.2 35 51-88 15-49 (296)
417 3h8v_A Ubiquitin-like modifier 93.7 0.066 2.2E-06 44.4 4.4 37 50-88 35-71 (292)
418 1l7d_A Nicotinamide nucleotide 93.6 0.087 3E-06 45.7 5.3 36 50-88 171-206 (384)
419 2ewd_A Lactate dehydrogenase,; 93.6 0.095 3.2E-06 44.1 5.4 35 51-87 4-38 (317)
420 3k6j_A Protein F01G10.3, confi 93.5 0.1 3.5E-06 46.2 5.7 37 49-88 52-88 (460)
421 1evy_A Glycerol-3-phosphate de 93.5 0.036 1.2E-06 47.7 2.8 32 53-87 17-48 (366)
422 4id9_A Short-chain dehydrogena 93.4 0.086 2.9E-06 44.7 5.0 38 48-88 16-54 (347)
423 3p7m_A Malate dehydrogenase; p 93.4 0.11 3.7E-06 43.8 5.5 37 49-87 3-39 (321)
424 3oj0_A Glutr, glutamyl-tRNA re 93.4 0.031 1.1E-06 41.0 1.9 34 51-87 21-54 (144)
425 2izz_A Pyrroline-5-carboxylate 93.4 0.091 3.1E-06 44.3 5.0 39 49-87 20-59 (322)
426 3pdu_A 3-hydroxyisobutyrate de 93.4 0.076 2.6E-06 43.9 4.4 34 52-88 2-35 (287)
427 4dll_A 2-hydroxy-3-oxopropiona 93.3 0.09 3.1E-06 44.3 4.9 36 50-88 30-65 (320)
428 3lov_A Protoporphyrinogen oxid 93.3 0.078 2.7E-06 47.2 4.7 38 264-304 249-286 (475)
429 1rsg_A FMS1 protein; FAD bindi 93.3 0.078 2.7E-06 47.9 4.8 40 264-304 215-254 (516)
430 1hdo_A Biliverdin IX beta redu 93.3 0.11 3.8E-06 40.1 5.1 33 52-87 4-37 (206)
431 2uyy_A N-PAC protein; long-cha 93.3 0.11 3.9E-06 43.5 5.5 35 51-88 30-64 (316)
432 1y6j_A L-lactate dehydrogenase 93.3 0.11 3.8E-06 43.7 5.3 36 51-87 7-42 (318)
433 2h78_A Hibadh, 3-hydroxyisobut 93.2 0.088 3E-06 43.9 4.6 34 51-87 3-36 (302)
434 2qyt_A 2-dehydropantoate 2-red 93.2 0.063 2.2E-06 45.0 3.8 31 52-85 9-45 (317)
435 3ego_A Probable 2-dehydropanto 93.2 0.097 3.3E-06 43.8 4.9 32 52-87 3-34 (307)
436 2pzm_A Putative nucleotide sug 93.2 0.11 3.6E-06 43.9 5.2 42 43-87 12-54 (330)
437 1zcj_A Peroxisomal bifunctiona 93.2 0.1 3.5E-06 46.4 5.2 35 50-87 36-70 (463)
438 1pjc_A Protein (L-alanine dehy 93.2 0.11 3.7E-06 44.6 5.2 34 51-87 167-200 (361)
439 1t2d_A LDH-P, L-lactate dehydr 93.1 0.14 4.6E-06 43.3 5.7 35 51-87 4-38 (322)
440 3pef_A 6-phosphogluconate dehy 93.1 0.1 3.4E-06 43.2 4.8 34 52-88 2-35 (287)
441 3i6i_A Putative leucoanthocyan 93.1 0.11 3.7E-06 44.1 5.1 36 49-87 8-44 (346)
442 1nyt_A Shikimate 5-dehydrogena 93.1 0.13 4.4E-06 42.2 5.4 34 50-86 118-151 (271)
443 1ldn_A L-lactate dehydrogenase 93.1 0.13 4.6E-06 43.2 5.5 36 50-86 5-40 (316)
444 1lld_A L-lactate dehydrogenase 93.1 0.12 4.1E-06 43.4 5.3 36 51-87 7-42 (319)
445 3fi9_A Malate dehydrogenase; s 93.1 0.14 4.8E-06 43.5 5.6 36 50-86 7-43 (343)
446 3l6d_A Putative oxidoreductase 93.0 0.15 5E-06 42.7 5.7 36 50-88 8-43 (306)
447 3dhn_A NAD-dependent epimerase 93.0 0.084 2.9E-06 41.7 4.1 35 51-88 4-39 (227)
448 3tri_A Pyrroline-5-carboxylate 93.0 0.12 4.3E-06 42.5 5.2 38 51-88 3-40 (280)
449 2rcy_A Pyrroline carboxylate r 93.0 0.12 4.1E-06 42.0 5.0 38 51-88 4-42 (262)
450 3mog_A Probable 3-hydroxybutyr 93.0 0.12 4.2E-06 46.1 5.4 36 50-88 4-39 (483)
451 2o3j_A UDP-glucose 6-dehydroge 93.0 0.11 3.7E-06 46.6 5.0 34 51-87 9-44 (481)
452 3nrn_A Uncharacterized protein 93.0 0.12 4.1E-06 45.2 5.3 34 209-242 2-35 (421)
453 3fwz_A Inner membrane protein 92.9 0.19 6.5E-06 36.5 5.6 33 207-239 7-39 (140)
454 1hyh_A L-hicdh, L-2-hydroxyiso 92.9 0.11 3.7E-06 43.6 4.7 35 52-87 2-36 (309)
455 3pqe_A L-LDH, L-lactate dehydr 92.9 0.14 4.8E-06 43.2 5.4 36 50-86 4-39 (326)
456 1z82_A Glycerol-3-phosphate de 92.9 0.12 4E-06 43.8 5.0 35 50-87 13-47 (335)
457 2ivd_A PPO, PPOX, protoporphyr 92.9 0.11 3.9E-06 46.1 5.1 52 248-304 237-291 (478)
458 3h5n_A MCCB protein; ubiquitin 92.8 0.12 4E-06 44.3 4.9 37 50-88 117-153 (353)
459 4a7p_A UDP-glucose dehydrogena 92.8 0.13 4.4E-06 45.5 5.3 35 51-88 8-42 (446)
460 2eez_A Alanine dehydrogenase; 92.8 0.13 4.4E-06 44.3 5.2 35 50-87 165-199 (369)
461 3phh_A Shikimate dehydrogenase 92.8 0.15 5.3E-06 41.6 5.3 34 51-87 118-151 (269)
462 3pid_A UDP-glucose 6-dehydroge 92.7 0.12 3.9E-06 45.5 4.8 34 51-88 36-69 (432)
463 1zej_A HBD-9, 3-hydroxyacyl-CO 92.7 0.13 4.4E-06 42.7 4.9 35 50-88 11-45 (293)
464 3ihm_A Styrene monooxygenase A 92.7 0.11 3.7E-06 45.7 4.7 34 207-240 22-55 (430)
465 2hjr_A Malate dehydrogenase; m 92.7 0.16 5.3E-06 43.0 5.4 35 51-87 14-48 (328)
466 2yg5_A Putrescine oxidase; oxi 92.6 0.1 3.5E-06 46.0 4.5 44 260-305 223-266 (453)
467 2vhw_A Alanine dehydrogenase; 92.6 0.14 4.9E-06 44.2 5.2 35 50-87 167-201 (377)
468 1guz_A Malate dehydrogenase; o 92.6 0.15 5E-06 42.8 5.1 34 53-87 2-35 (310)
469 3hwr_A 2-dehydropantoate 2-red 92.5 0.14 4.6E-06 43.2 4.9 32 51-86 19-50 (318)
470 3c24_A Putative oxidoreductase 92.5 0.17 5.9E-06 41.7 5.4 34 51-87 11-45 (286)
471 2q3e_A UDP-glucose 6-dehydroge 92.5 0.12 4.2E-06 46.0 4.8 34 51-87 5-40 (467)
472 1y8q_A Ubiquitin-like 1 activa 92.5 0.14 4.8E-06 43.6 4.9 37 50-88 35-71 (346)
473 4ezb_A Uncharacterized conserv 92.4 0.12 4.3E-06 43.4 4.5 34 51-87 24-58 (317)
474 3fpz_A Thiazole biosynthetic e 92.4 0.067 2.3E-06 45.1 2.9 65 207-271 65-138 (326)
475 1x0v_A GPD-C, GPDH-C, glycerol 92.4 0.083 2.8E-06 45.1 3.4 35 51-88 8-49 (354)
476 3cky_A 2-hydroxymethyl glutara 92.4 0.13 4.6E-06 42.6 4.6 34 51-87 4-37 (301)
477 1mv8_A GMD, GDP-mannose 6-dehy 92.3 0.12 4.2E-06 45.5 4.5 32 53-87 2-33 (436)
478 2iid_A L-amino-acid oxidase; f 92.3 0.13 4.4E-06 46.1 4.8 37 207-243 33-69 (498)
479 1ur5_A Malate dehydrogenase; o 92.3 0.18 6E-06 42.3 5.2 34 52-87 3-36 (309)
480 3ka7_A Oxidoreductase; structu 92.3 0.17 5.7E-06 44.2 5.3 35 209-243 2-36 (425)
481 3k7m_X 6-hydroxy-L-nicotine ox 92.2 0.16 5.6E-06 44.4 5.2 34 209-242 3-36 (431)
482 3r6d_A NAD-dependent epimerase 92.2 0.21 7.2E-06 39.2 5.4 34 51-87 5-40 (221)
483 2pv7_A T-protein [includes: ch 92.2 0.2 6.7E-06 41.7 5.4 35 51-88 21-56 (298)
484 2egg_A AROE, shikimate 5-dehyd 92.1 0.18 6.3E-06 41.9 5.1 36 50-87 140-175 (297)
485 1yj8_A Glycerol-3-phosphate de 92.1 0.12 4.2E-06 44.5 4.2 34 52-88 22-62 (375)
486 3ew7_A LMO0794 protein; Q8Y8U8 92.1 0.19 6.4E-06 39.4 5.0 32 53-87 2-34 (221)
487 3vps_A TUNA, NAD-dependent epi 92.1 0.2 6.8E-06 41.7 5.4 36 50-88 6-42 (321)
488 2e1m_A L-glutamate oxidase; L- 92.1 0.2 6.9E-06 43.2 5.4 37 207-243 44-81 (376)
489 3nks_A Protoporphyrinogen oxid 92.1 0.17 5.7E-06 45.0 5.2 36 208-243 3-40 (477)
490 4gx0_A TRKA domain protein; me 92.1 0.17 5.8E-06 46.2 5.3 35 52-89 349-383 (565)
491 2b9w_A Putative aminooxidase; 92.1 0.19 6.5E-06 43.9 5.5 36 207-242 6-42 (424)
492 2v6b_A L-LDH, L-lactate dehydr 92.0 0.19 6.6E-06 41.9 5.1 34 53-87 2-35 (304)
493 2i6t_A Ubiquitin-conjugating e 92.0 0.19 6.6E-06 41.9 5.1 36 51-87 14-49 (303)
494 3hwr_A 2-dehydropantoate 2-red 92.0 0.55 1.9E-05 39.4 8.0 33 206-239 18-50 (318)
495 3qsg_A NAD-binding phosphogluc 92.0 0.17 5.7E-06 42.5 4.8 35 50-86 23-57 (312)
496 2rir_A Dipicolinate synthase, 92.0 0.19 6.5E-06 41.9 5.0 35 49-86 155-189 (300)
497 1p77_A Shikimate 5-dehydrogena 92.0 0.15 5E-06 41.9 4.3 35 50-87 118-152 (272)
498 4gwg_A 6-phosphogluconate dehy 92.0 0.19 6.4E-06 44.9 5.2 36 50-88 3-38 (484)
499 3q2o_A Phosphoribosylaminoimid 92.0 0.22 7.5E-06 43.1 5.6 36 50-88 13-48 (389)
500 1txg_A Glycerol-3-phosphate de 91.9 0.16 5.3E-06 42.9 4.5 30 53-85 2-31 (335)
No 1
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=3.1e-33 Score=249.13 Aligned_cols=241 Identities=34% Similarity=0.541 Sum_probs=206.3
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
+++||+|||||++|+++|.+|+++|+ +.+|+|+|+++...|.++.+...++..... .. ........+
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~-~~~V~lie~~~~~~y~~~~l~~~~~~~~~~-~~-----------~~~~~~~~~ 74 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGF-EGRVLVIGREPEIPYERPPLSKEYLAREKT-FE-----------RICIRPAQF 74 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC-CSCEEEEESSSSCCBCSGGGGTTTTTTSSC-SG-----------GGBSSCHHH
T ss_pred CCCcEEEECChHHHHHHHHHHHccCc-CCCEEEEecCCCCCcCcccCCHHHHcCCCC-HH-----------HhccCCHHH
Confidence 45799999999999999999999997 456999999998888766655433322110 10 112456778
Q ss_pred HhhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCCCCCEEEEccHHHHHHHHHhhhc-CC
Q 021871 130 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEK-AK 208 (306)
Q Consensus 130 ~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~ 208 (306)
+.+.+++++.++++..++...+.+.+.++..+.||+|++|||+.+.. |++++.+.+++..++...+...+...+.. ++
T Consensus 75 ~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~~~~-~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~ 153 (415)
T 3lxd_A 75 WEDKAVEMKLGAEVVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPRR-LSCVGADLAGVHAVRTKEDADRLMAELDAGAK 153 (415)
T ss_dssp HHHTTEEEEETCCEEEEETTTTEEEETTSCEEEEEEEEECCCEECCC-CBTTSSCCBTEECCCSHHHHHHHHHHHHTTCC
T ss_pred HHHCCcEEEeCCEEEEEECCCCEEEECCCCEEEeeEEEEccCCccCC-CCCCCccccCEEEEcCHHHHHHHHHHhhhcCC
Confidence 88999999999999999999999999999999999999999998874 56777667788888788888887777777 89
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEe
Q 021871 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL 288 (306)
Q Consensus 209 ~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~ 288 (306)
+++|||+|.+++|+|..+...+.+|+++.+.+.++++..++.+.+.+.+.++++||++++++.|++++. +++.+.+|++
T Consensus 154 ~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~v~l 232 (415)
T 3lxd_A 154 NAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEG-DGTKVTGVRM 232 (415)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEE-SSSBEEEEEE
T ss_pred eEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEe-cCCcEEEEEe
Confidence 999999999999999999999999999999999998778999999999999999999999999999996 5677778999
Q ss_pred CCCCEEecCEEEEecCC
Q 021871 289 EDGSTIDADTVILLPYD 305 (306)
Q Consensus 289 ~~G~~i~~d~vv~a~g~ 305 (306)
.+|+++++|.||+|+|.
T Consensus 233 ~dG~~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 233 QDGSVIPADIVIVGIGI 249 (415)
T ss_dssp SSSCEEECSEEEECSCC
T ss_pred CCCCEEEcCEEEECCCC
Confidence 99999999999999996
No 2
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=8e-33 Score=245.58 Aligned_cols=238 Identities=29% Similarity=0.495 Sum_probs=206.1
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHHh
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 131 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (306)
+||+|||||++|+++|.+|+++|+ +.+|+|+|+++...|.++.+...++.... ... ........++.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~-~~~V~lie~~~~~~y~~~~l~~~~l~~~~-~~~-----------~~~~~~~~~~~ 68 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKY-PGRIALINDEKHLPYQRPPLSKAYLKSGG-DPN-----------SLMFRPEKFFQ 68 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CSCEEEECCSSSSSBCSGGGGTGGGGSCC-CTT-----------SSBSSCHHHHH
T ss_pred CCEEEEcChHHHHHHHHHHHhhCc-CCCEEEEeCCCCCCCCCccCCHHHHCCCC-CHH-----------HccCCCHHHHH
Confidence 689999999999999999999996 56899999999888887766654443221 111 11345678888
Q ss_pred hcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCCCCCEEEEccHHHHHHHHHhhhcCCeEE
Q 021871 132 EKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVV 211 (306)
Q Consensus 132 ~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~ 211 (306)
+.+++++. .++..++...+.+.+.++..+.||++++|||+.+.. |++++.+.+++..++...+...+......+++++
T Consensus 69 ~~~i~~~~-~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~-~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~vv 146 (404)
T 3fg2_P 69 DQAIELIS-DRMVSIDREGRKLLLASGTAIEYGHLVLATGARNRM-LDVPNASLPDVLYLRTLDESEVLRQRMPDKKHVV 146 (404)
T ss_dssp HTTEEEEC-CCEEEEETTTTEEEESSSCEEECSEEEECCCEEECC-CCSTTTTSTTEECCSSHHHHHHHHHHGGGCSEEE
T ss_pred hCCCEEEE-EEEEEEECCCCEEEECCCCEEECCEEEEeeCCCccC-CCCCCCCCCcEEEECCHHHHHHHHHHhhcCCeEE
Confidence 99999998 899999999999999999999999999999998774 5677777788888888888888888777899999
Q ss_pred EEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCC
Q 021871 212 VVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG 291 (306)
Q Consensus 212 viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G 291 (306)
|+|+|.+|+|+|..+.+.+.+|+++.+.+.++++..++.+.+.+.+.++++||++++++.|++++. +++.+.+|.+.+|
T Consensus 147 ViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~V~~~dG 225 (404)
T 3fg2_P 147 VIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAA-EGDRVTGVVLSDG 225 (404)
T ss_dssp EECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTS
T ss_pred EECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEe-cCCcEEEEEeCCC
Confidence 999999999999999999999999999999998778999999999999999999999999999986 4567778999999
Q ss_pred CEEecCEEEEecCC
Q 021871 292 STIDADTVILLPYD 305 (306)
Q Consensus 292 ~~i~~d~vv~a~g~ 305 (306)
+++++|.||+|+|.
T Consensus 226 ~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 226 NTLPCDLVVVGVGV 239 (404)
T ss_dssp CEEECSEEEECCCE
T ss_pred CEEEcCEEEECcCC
Confidence 99999999999985
No 3
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=2.9e-33 Score=248.70 Aligned_cols=238 Identities=28% Similarity=0.464 Sum_probs=202.5
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
+++|+|||||++|+++|.+|+++|+ +.+|+|+|+++...|.++.+...++..... .. .. .....++
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g~-~~~V~li~~~~~~~y~~~~l~~~~~~g~~~-~~-----------~~-~~~~~~~ 67 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEGF-EGRISLIGDEPHLPYDRPSLSKAVLDGSLE-RP-----------PI-LAEADWY 67 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-CSEEEEEECSSSSSBCSGGGGTHHHHTSSS-SC-----------CB-SSCTTHH
T ss_pred CCCEEEEcccHHHHHHHHHHHccCc-CCeEEEEECCCCCCcCCccccHHHhCCCCC-HH-----------Hh-cCCHHHH
Confidence 3599999999999999999999996 456999999998888877665544322111 10 11 2345678
Q ss_pred hhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCCCCCEEEEccHHHHHHHHHhhhcCCeE
Q 021871 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKV 210 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v 210 (306)
.+.+++++.+++|..++...+.+.+.++..+.||+||+|||+.+.. |++|+.+.+++.+++...+...+.+.+..++++
T Consensus 68 ~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~-~~ipG~~~~~v~~~~~~~d~~~l~~~~~~~~~v 146 (410)
T 3ef6_A 68 GEARIDMLTGPEVTALDVQTRTISLDDGTTLSADAIVIATGSRART-MALPGSQLPGVVTLRTYGDVQVLRDSWTSATRL 146 (410)
T ss_dssp HHTTCEEEESCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECC-CCCTTTTSTTEECCCSHHHHHHHHHHCCTTCEE
T ss_pred HHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEccCCcccC-CCCCCccccceEEeccHHHHHHHHHHhccCCeE
Confidence 8899999999999999999999999999899999999999999874 567777778888888888888887777778999
Q ss_pred EEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCC
Q 021871 211 VVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED 290 (306)
Q Consensus 211 ~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~ 290 (306)
+|||+|.+|+|+|..+.+.+.+|+++.+.+.++++.+++.+.+.+.+.++++||++++++.|++++. ++.+.+|++.+
T Consensus 147 vViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~v~~~d 224 (410)
T 3ef6_A 147 LIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSG--EGQLEQVMASD 224 (410)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEEC--SSSCCEEEETT
T ss_pred EEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEec--cCcEEEEEECC
Confidence 9999999999999999999999999999999988778999999999999999999999999999995 33555799999
Q ss_pred CCEEecCEEEEecCC
Q 021871 291 GSTIDADTVILLPYD 305 (306)
Q Consensus 291 G~~i~~d~vv~a~g~ 305 (306)
|+++++|.||+|+|.
T Consensus 225 g~~i~aD~Vv~a~G~ 239 (410)
T 3ef6_A 225 GRSFVADSALICVGA 239 (410)
T ss_dssp SCEEECSEEEECSCE
T ss_pred CCEEEcCEEEEeeCC
Confidence 999999999999985
No 4
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=5.9e-32 Score=241.67 Aligned_cols=242 Identities=30% Similarity=0.462 Sum_probs=196.9
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
+.+||+|||||++|+++|..|++.|+ +.+|+|+|+++...|.++.....++.... . .. .......++
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~l~~~~~~~~~-~------~~-----~~~~~~~~~ 69 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGW-EGNIRLVGDATVIPHHLPPLSKAYLAGKA-T------AE-----SLYLRTPDA 69 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTC-CSEEEEECSCCSCCBCSGGGGTTTTTTCS-C------SG-----GGBSSCHHH
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCc-CCCEEEEECCCCCCCcCCCCcHHHhCCCC-C------hH-----HhcccCHHH
Confidence 35899999999999999999999986 55799999998776665444332221100 0 00 011234577
Q ss_pred HhhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCCCCC---EEEEccHHHHHHHHHhhhc
Q 021871 130 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPG---VHYIRDVADADALISSLEK 206 (306)
Q Consensus 130 ~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~ 206 (306)
+++.+++++.+++|..++...+.+.++++..+.||+||+|+|+.+.. |++++.+.++ +.+++...+...+.+.+..
T Consensus 70 ~~~~gv~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p~~-~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l~~ 148 (431)
T 1q1r_A 70 YAAQNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPRP-LPVASGAVGKANNFRYLRTLEDAECIRRQLIA 148 (431)
T ss_dssp HHHTTEEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECC-CGGGTTHHHHSTTEEESSSHHHHHHHHHTCCT
T ss_pred HHhCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEcCCCCccC-CCCCCcccCCCceEEEECCHHHHHHHHHHhhc
Confidence 88899999999999999998888999888889999999999998874 5566654445 7777777777777666667
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeC-CCCcEEE
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAG-SDGRVAA 285 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~-~~~~v~~ 285 (306)
+++++|||+|.+|+|+|..+.+.+.+|+++.+.+.++++.+++.+.+.+.+.+++.||++++++.|++++.. +++.+..
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~ 228 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTA 228 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEE
Confidence 899999999999999999999999999999999998887678999999999999999999999999999852 3456667
Q ss_pred EEeCCCCEEecCEEEEecCC
Q 021871 286 VKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 286 v~~~~G~~i~~d~vv~a~g~ 305 (306)
|.+.+|+++++|.||+|+|.
T Consensus 229 v~~~~G~~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 229 VLCEDGTRLPADLVIAGIGL 248 (431)
T ss_dssp EEETTSCEEECSEEEECCCE
T ss_pred EEeCCCCEEEcCEEEECCCC
Confidence 88999999999999999985
No 5
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=2.2e-31 Score=236.47 Aligned_cols=231 Identities=26% Similarity=0.394 Sum_probs=190.1
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
+++||+|||||++|+++|.+|++.|+ +.+|+|+|+++...|.++.....++.... ... ..+. +
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~~~~~~~~~~~--~~~-------------~~~~-~ 68 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGY-QGLITVVGDEAERPYDRPPLSKDFMAHGD--AEK-------------IRLD-C 68 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTC-CSCEEEEESSCSCCBCSGGGGTHHHHHCC--GGG-------------SBCC-C
T ss_pred CCCcEEEECChHHHHHHHHHHHccCC-CCeEEEEECCCCCcccCCCCCHHHhCCCc--hhh-------------hhHH-H
Confidence 45899999999999999999999996 45699999998777765544432221110 000 0111 4
Q ss_pred HhhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCccCCCC-CCCCCCCEEEEccHHHHHHHHHhhhcCC
Q 021871 130 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEK-IGGYLPGVHYIRDVADADALISSLEKAK 208 (306)
Q Consensus 130 ~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 208 (306)
+++.+++++.+++|..++.+.+.+.++++..+.||+||+|||+.+.. |++ ++.+ +++.+++...+...+.+.+..++
T Consensus 69 ~~~~~v~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~~~~-~~i~~G~~-~~v~~~~~~~~~~~l~~~~~~~~ 146 (408)
T 2gqw_A 69 KRAPEVEWLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRA-LPTLQGAT-MPVHTLRTLEDARRIQAGLRPQS 146 (408)
T ss_dssp TTSCSCEEEETCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECC-CGGGTTCS-SCEEECCSHHHHHHHHTTCCTTC
T ss_pred HHHCCCEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCC-CCccCCCC-CcEEEECCHHHHHHHHHHhhcCC
Confidence 56789999999889999998889999888889999999999998874 556 7755 77777777777766665556689
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEe
Q 021871 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL 288 (306)
Q Consensus 209 ~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~ 288 (306)
+++|||+|.+|+|+|..+.+.+.+|+++.+.+.++++.+++.+.+.+.+.++++||+++++++|++++ + + .|++
T Consensus 147 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~-~----~v~~ 220 (408)
T 2gqw_A 147 RLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSV-D-G----VVLL 220 (408)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEE-T-T----EEEE
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE-C-C----EEEE
Confidence 99999999999999999999999999999999998866799999999999999999999999999998 2 2 4778
Q ss_pred CCCCEEecCEEEEecCC
Q 021871 289 EDGSTIDADTVILLPYD 305 (306)
Q Consensus 289 ~~G~~i~~d~vv~a~g~ 305 (306)
.+|+++++|.||+|+|.
T Consensus 221 ~~g~~i~~D~vi~a~G~ 237 (408)
T 2gqw_A 221 DDGTRIAADMVVVGIGV 237 (408)
T ss_dssp TTSCEEECSEEEECSCE
T ss_pred CCCCEEEcCEEEECcCC
Confidence 89999999999999985
No 6
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=4.7e-31 Score=237.46 Aligned_cols=238 Identities=20% Similarity=0.265 Sum_probs=186.4
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHHh
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 131 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (306)
+||+|||||++|+++|++|++++ +..+|+|+|+++..+|..+.... +......... ........++.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~-~g~~V~vie~~~~~g~~~~~~~~-~~~~~~~~~~-----------~~~~~~~~~~~ 69 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKY-PQAEISLIDKQATVGYLSGGLSA-YFNHTINELH-----------EARYITEEELR 69 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC-SSSEEEEECSSSCCSSCCC----------------------------CCCCHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhhC-cCCcEEEEECCCCCcccCccchh-hhcCCCCCHH-----------HhhcCCHHHHH
Confidence 69999999999999999999983 23399999999887765443322 1111000001 11234667788
Q ss_pred hcCeEEEeCCcEEEEeCCCCEEEc---CCCcEEecCcEEEeeCCCCccCCCCCCCCCCCEEEEccHHHHHHHHHhhhcCC
Q 021871 132 EKGIEMIYQDPVTSIDIEKQTLIT---NSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAK 208 (306)
Q Consensus 132 ~~~v~~~~~~~v~~v~~~~~~v~~---~~g~~~~~~~lila~G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 208 (306)
+.+++++++++|.+++...+.+.+ .++..+.||++|+|||+.+.. |++++.+.+++...+.+.+...+.+....++
T Consensus 70 ~~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~-p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~ 148 (452)
T 3oc4_A 70 RQKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQFS-TQIRGSQTEKLLKYKFLSGALAAVPLLENSQ 148 (452)
T ss_dssp HTTEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCCBCC-CCCBTTTCTTEEEGGGCC----CCHHHHTCS
T ss_pred HCCCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcccCC-CCCCCCCCCCEEEeCCHHHHHHHHHHHhcCC
Confidence 899999999999999998887655 245589999999999998874 6677776777777766666666666666789
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEe
Q 021871 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL 288 (306)
Q Consensus 209 ~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~ 288 (306)
+++|||+|.+|+|+|..+.+.+.+|+++.+.+.+++..+++.+.+.+.+.++++||+++++++|++++. +++.+ .|.+
T Consensus 149 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v-~v~~ 226 (452)
T 3oc4_A 149 TVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEE-TANGI-VLET 226 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEE-CSSCE-EEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEc-cCCeE-EEEE
Confidence 999999999999999999999999999999999998767999999999999999999999999999996 45555 6888
Q ss_pred CCCCEEecCEEEEecCCC
Q 021871 289 EDGSTIDADTVILLPYDQ 306 (306)
Q Consensus 289 ~~G~~i~~d~vv~a~g~~ 306 (306)
++| ++++|.||+|+|..
T Consensus 227 ~~g-~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 227 SEQ-EISCDSGIFALNLH 243 (452)
T ss_dssp SSC-EEEESEEEECSCCB
T ss_pred CCC-EEEeCEEEECcCCC
Confidence 877 99999999999963
No 7
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.98 E-value=1.7e-30 Score=236.02 Aligned_cols=240 Identities=22% Similarity=0.328 Sum_probs=189.1
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
+++||+|||||++|+++|..|++.|.+..+|+|+|+++...+..+.... ++..... .... ........
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~-~~~~~~~------~~~~-----~~~~~~~~ 101 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMAL-WIGEQIA------GPEG-----LFYSDKEE 101 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHH-HHTTSSS------CSGG-----GBSCCHHH
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccch-hhcCccC------CHHH-----hhhcCHHH
Confidence 4589999999999999999999987112299999998765543322110 1100000 0011 12344667
Q ss_pred HhhcCeEEEeCCcEEEEeCCCCEEEcC-CC--cEEecCcEEEeeCCCCccCCCCCCCC-----------CCCEEEEccHH
Q 021871 130 YKEKGIEMIYQDPVTSIDIEKQTLITN-SG--KLLKYGSLIVATGCTASRFPEKIGGY-----------LPGVHYIRDVA 195 (306)
Q Consensus 130 ~~~~~v~~~~~~~v~~v~~~~~~v~~~-~g--~~~~~~~lila~G~~~~~~~~~~~~~-----------~~g~~~~~~~~ 195 (306)
+++.+++++.+++|..++.+...+.+. ++ ..+.||+||+|||+.+.. |++++.+ .+++..++.+.
T Consensus 102 ~~~~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~-p~i~G~~~~~~~~~f~~~~~~v~~~~~~~ 180 (490)
T 2bc0_A 102 LESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPIL-PPIKGAEIKEGSLEFEATLENLQFVKLYQ 180 (490)
T ss_dssp HHHTTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEECC-CSCBTCCBCTTCTTCCBSSTTEEECSSHH
T ss_pred HHhCCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCC-CCCCCccccccccccccccCCEEEeCCHH
Confidence 788899999999999999888777765 43 479999999999998874 5677765 56788777788
Q ss_pred HHHHHHHhh--hcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEE
Q 021871 196 DADALISSL--EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIK 273 (306)
Q Consensus 196 ~~~~~~~~~--~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~ 273 (306)
+...+.+.. ..+++++|||+|.+|+|+|..+++.+.+|+++.+.+.+++..+++++.+.+.+.++++||++++++.|+
T Consensus 181 ~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~ 260 (490)
T 2bc0_A 181 NSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVK 260 (490)
T ss_dssp HHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEE
T ss_pred HHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEE
Confidence 888887776 678999999999999999999999999999999999998866899999999999999999999999999
Q ss_pred EEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 274 NLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 274 ~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+++. ++.+..+.+ +|+++++|.||+|+|.
T Consensus 261 ~i~~--~~~v~~v~~-~g~~i~~D~Vi~a~G~ 289 (490)
T 2bc0_A 261 EVAG--NGKVEKIIT-DKNEYDVDMVILAVGF 289 (490)
T ss_dssp EEEC--SSSCCEEEE-SSCEEECSEEEECCCE
T ss_pred EEEc--CCcEEEEEE-CCcEEECCEEEECCCC
Confidence 9984 444434666 6779999999999985
No 8
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.98 E-value=1e-31 Score=236.36 Aligned_cols=223 Identities=22% Similarity=0.332 Sum_probs=186.9
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChh
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (306)
.++.+|+|||||+||+++|..|...+. +|+|+|+++..+|.++.+.. ++... .... .......+
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~---~itlie~~~~~~y~~~~l~~-~l~g~-~~~~-----------~l~~~~~~ 70 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCD---DITMINSEKYLPYYRPRLNE-IIAKN-KSID-----------DILIKKND 70 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCS---CEEEECSSSSCCBCGGGHHH-HHHSC-CCGG-----------GTBSSCHH
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCC---EEEEEECCCCCCcccChhhH-HHcCC-CCHH-----------HccCCCHH
Confidence 346799999999999999999955554 99999999988887666554 22111 1111 11356778
Q ss_pred HHhhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCCCCCEEEEccHHHHHHHHHhhhcCC
Q 021871 129 WYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAK 208 (306)
Q Consensus 129 ~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 208 (306)
++++.+++++++++|.+++.+.+.+.+++++.+.||+||+|||+.+.. |++++.+ ++..++...+...+.+.+..++
T Consensus 71 ~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~-p~i~G~~--~v~~~~~~~d~~~l~~~l~~~~ 147 (385)
T 3klj_A 71 WYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANK-IKVPHAD--EIFSLYSYDDALKIKDECKNKG 147 (385)
T ss_dssp HHHHTTCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECC-CCCTTCS--CEECCSSHHHHHHHHHHHHHHS
T ss_pred HHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcCC-CCCCCCC--CeEEeCCHHHHHHHHHHhhcCC
Confidence 889999999999999999999999999999999999999999998874 5566654 7777777888877777777789
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEe
Q 021871 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL 288 (306)
Q Consensus 209 ~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~ 288 (306)
+++|||+|.+|+|+|..+.+.+.+|+++.+.+.++++.+++.+.+.+.+.++++||++++++.|+++
T Consensus 148 ~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i------------- 214 (385)
T 3klj_A 148 KAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM------------- 214 (385)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGC-------------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEc-------------
Confidence 9999999999999999999999999999999999988789999999999999999999999888666
Q ss_pred CCCCEEecCEEEEecCC
Q 021871 289 EDGSTIDADTVILLPYD 305 (306)
Q Consensus 289 ~~G~~i~~d~vv~a~g~ 305 (306)
|+++++|.||+|+|.
T Consensus 215 --g~~~~~D~vv~a~G~ 229 (385)
T 3klj_A 215 --GDLIRSSCVITAVGV 229 (385)
T ss_dssp --HHHHHHSEEEECCCE
T ss_pred --CeEEecCeEEECcCc
Confidence 567899999999985
No 9
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.97 E-value=1.6e-30 Score=229.29 Aligned_cols=239 Identities=21% Similarity=0.304 Sum_probs=189.4
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
+++||+|||||++|+++|.+|++.|. +.+|+++|++....|.++.+...+ ... .....+. ...+..+
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~-~~~V~lie~~~g~~~~~~~l~~~~--~~~------~~~~~~~----~~~~~~~ 69 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDG-ETPLLMITADDGRSYSKPMLSTGF--SKN------KDADGLA----MAEPGAM 69 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCS-SSCEEEECSSCCCEECGGGGGGTT--TTT------CCHHHHE----EECHHHH
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCC-CCCEEEEECCCCCccCcccccHHH--hCC------CCHHHhh----ccCHHHH
Confidence 35899999999999999999999985 457999999875544433322211 000 0000100 1133455
Q ss_pred HhhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCCCCCEEEEccHHHHHHHHHhhhcCCe
Q 021871 130 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKK 209 (306)
Q Consensus 130 ~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 209 (306)
+++.+++++.++++..++...+.+.+.+ ..+.||++|+|||+.+.. |++++.+.+++...+++.+...+...+..+++
T Consensus 70 ~~~~~v~~~~~~~v~~i~~~~~~v~~~~-~~~~~d~lviAtG~~p~~-p~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~ 147 (384)
T 2v3a_A 70 AEQLNARILTHTRVTGIDPGHQRIWIGE-EEVRYRDLVLAWGAEPIR-VPVEGDAQDALYPINDLEDYARFRQAAAGKRR 147 (384)
T ss_dssp HHHTTCEEECSCCCCEEEGGGTEEEETT-EEEECSEEEECCCEEECC-CCCBSTTTTCEEECSSHHHHHHHHHHHTTCCE
T ss_pred HHhCCcEEEeCCEEEEEECCCCEEEECC-cEEECCEEEEeCCCCcCC-CCCCCcCcCCEEEECCHHHHHHHHHhhccCCe
Confidence 6788999998888999998778888765 469999999999998874 56777555677777778877777777777999
Q ss_pred EEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeC
Q 021871 210 VVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE 289 (306)
Q Consensus 210 v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~ 289 (306)
++|+|+|.+|+|+|..+.+.+.+|+++.+.+.+++...++.+.+.+.+.+++.||+++++++|++++.+ ++.+ .|.+.
T Consensus 148 v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~~-~v~~~ 225 (384)
T 2v3a_A 148 VLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKA-GEGL-EAHLS 225 (384)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEE-TTEE-EEEET
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEec-CCEE-EEEEC
Confidence 999999999999999999999999999999998887668999999999999999999999999999863 3333 68888
Q ss_pred CCCEEecCEEEEecCC
Q 021871 290 DGSTIDADTVILLPYD 305 (306)
Q Consensus 290 ~G~~i~~d~vv~a~g~ 305 (306)
+|+++++|.||+|+|.
T Consensus 226 ~g~~i~~d~vv~a~G~ 241 (384)
T 2v3a_A 226 DGEVIPCDLVVSAVGL 241 (384)
T ss_dssp TSCEEEESEEEECSCE
T ss_pred CCCEEECCEEEECcCC
Confidence 9989999999999985
No 10
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.97 E-value=2.6e-30 Score=233.94 Aligned_cols=246 Identities=24% Similarity=0.360 Sum_probs=174.8
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
++||+|||||++||++|++|++++ +..+|+|+|+++...|..+.++. ++.........+..+. .....+...+.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~-~g~~Vtvie~~~~~~~~~~gl~~-~~~g~~~~~~~~~~~~----~~~~~~~~~~~ 76 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLD-PEAHVTMIDQASRISYGGCGIPY-YVSGEVSNIESLQATP----YNVVRDPEFFR 76 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHC-TTSEEEEECCC--------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhC-cCCCEEEEECCCcccccccccch-hhcCCCCchHHhcccc----chhccCHHHHh
Confidence 479999999999999999999993 23399999999887766544332 1111000000000000 00012233333
Q ss_pred hhcCeEEEeCCcEEEEeCCCCEEEcCC---Cc--EEecCcEEEeeCCCCccCCCCCCCCCCCEEEEccHHHHHHHHHhhh
Q 021871 131 KEKGIEMIYQDPVTSIDIEKQTLITNS---GK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE 205 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~~~v~~~~---g~--~~~~~~lila~G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 205 (306)
++.+++++++++|..++...+.+.+.+ +. .+.||++|+|||+.+. .|++++.+.+++..+....+...+.+.+.
T Consensus 77 ~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~-~p~i~G~~~~~v~~~~~~~~~~~l~~~l~ 155 (472)
T 3iwa_A 77 INKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKAN-RPPVEGMDLAGVTPVTNLDEAEFVQHAIS 155 (472)
T ss_dssp ----CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC-CCSCTTTTSBTEEECCSHHHHHHHHHHCC
T ss_pred hhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcC-CCCCCCCCCCCEEEeCCHHHHHHHHHHhh
Confidence 457899999999999999888776654 55 7899999999999877 46677766777877777777766665553
Q ss_pred --cCCeEEEEcCCHHHHHHHHHHHhC-CCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCc
Q 021871 206 --KAKKVVVVGGGYIGMEVAAAAVGW-KLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGR 282 (306)
Q Consensus 206 --~~~~v~viG~g~~a~e~a~~l~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~ 282 (306)
.+++++|+|+|.+++|+|..+... +.+|+++.+.+.++++.+++.+.+.+.+.+++.||+++++++|++++. +++.
T Consensus 156 ~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~ 234 (472)
T 3iwa_A 156 AGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEG-ENGK 234 (472)
T ss_dssp TTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEE-SSSB
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEc-cCCe
Confidence 478999999999999999999999 999999999999988558999999999999999999999999999996 4566
Q ss_pred EEEEEeCCCCEEecCEEEEecCC
Q 021871 283 VAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 283 v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+ .+.+.+|+++++|.||+|+|.
T Consensus 235 v-~v~~~~g~~i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 235 V-ARVITDKRTLDADLVILAAGV 256 (472)
T ss_dssp E-EEEEESSCEEECSEEEECSCE
T ss_pred E-EEEEeCCCEEEcCEEEECCCC
Confidence 5 377888989999999999985
No 11
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.97 E-value=2e-30 Score=226.96 Aligned_cols=225 Identities=23% Similarity=0.394 Sum_probs=181.5
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
..||+|||||++|+++|..|++.| +|+|+|+++...|.++.+.. ++.. . . .+.. .......++
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g----~V~lie~~~~~~~~~~~l~~-~~~g-~---~---~~~~-----~~~~~~~~~ 70 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY----EVTVIDKEPVPYYSKPMLSH-YIAG-F---I---PRNR-----LFPYSLDWY 70 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS----EEEEECSSSSCCCCSTTHHH-HHTT-S---S---CGGG-----GCSSCHHHH
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC----CEEEEECCCCCccccchhHH-HHhC-C---C---CHHH-----hccCCHHHH
Confidence 359999999999999999998876 89999999876665444332 1110 0 0 0111 123456778
Q ss_pred hhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCCCCCEEEEccHHHHHHHHHhhhcCCeE
Q 021871 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKV 210 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v 210 (306)
++.+++++.+++|..++...+.+. .++..+.||+||+|||+.+.. |++++ .+++..++...+...+.+.+..++++
T Consensus 71 ~~~~v~~~~g~~v~~id~~~~~V~-~~g~~~~~d~lViATGs~p~~-p~i~G--~~~v~~~~~~~~~~~l~~~~~~~~~v 146 (367)
T 1xhc_A 71 RKRGIEIRLAEEAKLIDRGRKVVI-TEKGEVPYDTLVLATGARARE-PQIKG--KEYLLTLRTIFDADRIKESIENSGEA 146 (367)
T ss_dssp HHHTEEEECSCCEEEEETTTTEEE-ESSCEEECSEEEECCCEEECC-CCSBT--GGGEECCCSHHHHHHHHHHHHHHSEE
T ss_pred HhCCcEEEECCEEEEEECCCCEEE-ECCcEEECCEEEECCCCCCCC-CCCCC--cCCEEEEcCHHHHHHHHHHhhcCCcE
Confidence 889999999988999999888887 677789999999999998874 55565 45666666666666665555556899
Q ss_pred EEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCC
Q 021871 211 VVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED 290 (306)
Q Consensus 211 ~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~ 290 (306)
+|||+|.+|+|+|..+.+.+.+|+++.+.+.+++ +++.+.+.+.+.++++||+++++++|++++. + +|++++
T Consensus 147 vViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~--~----~v~~~~ 218 (367)
T 1xhc_A 147 IIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG--LDEELSNMIKDMLEETGVKFFLNSELLEANE--E----GVLTNS 218 (367)
T ss_dssp EEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT--CCHHHHHHHHHHHHHTTEEEECSCCEEEECS--S----EEEETT
T ss_pred EEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc--CCHHHHHHHHHHHHHCCCEEEcCCEEEEEEe--e----EEEECC
Confidence 9999999999999999999999999999999888 7999999999999999999999999999983 2 477888
Q ss_pred CCEEecCEEEEecCC
Q 021871 291 GSTIDADTVILLPYD 305 (306)
Q Consensus 291 G~~i~~d~vv~a~g~ 305 (306)
|+ +++|.||+|+|.
T Consensus 219 g~-i~~D~vi~a~G~ 232 (367)
T 1xhc_A 219 GF-IEGKVKICAIGI 232 (367)
T ss_dssp EE-EECSCEEEECCE
T ss_pred CE-EEcCEEEECcCC
Confidence 87 999999999985
No 12
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.97 E-value=4.3e-30 Score=231.27 Aligned_cols=238 Identities=23% Similarity=0.318 Sum_probs=189.3
Q ss_pred CcEEEEcCChHHHHHHHHHHHc--CCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 52 REFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~--g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
+||+|||||++|+++|.+|++. |. +|+|+|+++...|..+.+.. ++..... .. .+.. ....+...
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~---~V~lie~~~~~~~~~~~~~~-~~~g~~~-~~---~~~~-----~~~~~~~~ 67 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDA---DVTAYEMNDNISFLSCGIAL-YLGKEIK-NN---DPRG-----LFYSSPEE 67 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTC---EEEEEESSSCCCBCGGGHHH-HHTTCBG-GG---CGGG-----GBSCCHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCC---cEEEEECCCCCCcccccchh-hhcCCcc-cC---CHHH-----hhhcCHHH
Confidence 5899999999999999999998 65 99999998866553322110 0000000 00 0000 12345667
Q ss_pred HhhcCeEEEeCCcEEEEeCCCCEEEcCC-----CcEEecCcEEEeeCCCCccCCCCCCCCCCCEEEEccHHHHHHHHHhh
Q 021871 130 YKEKGIEMIYQDPVTSIDIEKQTLITNS-----GKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL 204 (306)
Q Consensus 130 ~~~~~v~~~~~~~v~~v~~~~~~v~~~~-----g~~~~~~~lila~G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 204 (306)
+++.+++++.++++..++.+...+.+.+ +..+.||++|+|+|+.+.. |++++.+.+++..++.+.+...+.+..
T Consensus 68 ~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~-p~i~g~~~~~v~~~~~~~~~~~~~~~~ 146 (452)
T 2cdu_A 68 LSNLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTV-PPIPGIDSSRVYLCKNYNDAKKLFEEA 146 (452)
T ss_dssp HHHTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECC-CCCTTTTSTTEEECSSHHHHHHHHHHG
T ss_pred HHHcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCC-CCCCCCCCCCEEEeCcHHHHHHHHHHh
Confidence 8889999988988999998777776643 4579999999999998874 567776667788888888888888877
Q ss_pred hcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEE
Q 021871 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 284 (306)
Q Consensus 205 ~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~ 284 (306)
..+++++|||+|.+|+|+|..+.+.+.+|+++.+.+.++++.+++.+.+.+.+.++++||+++++++|++++. +++++.
T Consensus 147 ~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~-~~~~v~ 225 (452)
T 2cdu_A 147 PKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEE-VDDEII 225 (452)
T ss_dssp GGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEE-ETTEEE
T ss_pred ccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEc-CCCeEE
Confidence 8899999999999999999999999999999999999988668999999999999999999999999999985 356554
Q ss_pred EEEeCCCCEEecCEEEEecCC
Q 021871 285 AVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 285 ~v~~~~G~~i~~d~vv~a~g~ 305 (306)
.+.+ +|+++++|.||+|+|.
T Consensus 226 ~v~~-~g~~i~~D~vv~a~G~ 245 (452)
T 2cdu_A 226 TKTL-DGKEIKSDIAILCIGF 245 (452)
T ss_dssp EEET-TSCEEEESEEEECCCE
T ss_pred EEEe-CCCEEECCEEEECcCC
Confidence 5655 6789999999999985
No 13
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.97 E-value=1.6e-29 Score=234.65 Aligned_cols=258 Identities=19% Similarity=0.283 Sum_probs=189.4
Q ss_pred ccCccccccccceeeecccCCCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCC
Q 021871 29 HSSAKNFQRRGFVVAYSSFANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKP 108 (306)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~ 108 (306)
-..||...++....... ..++++||+|||||++||++|++|++++ +..+|+|+|+++..+|..+.++. ++.......
T Consensus 15 ~~~np~~g~e~~~~~~~-~~~~~~~VvIIGgG~AGl~aA~~L~~~~-~g~~V~vie~~~~~~~~~~~lp~-~~~g~~~~~ 91 (588)
T 3ics_A 15 MTGGQQMGRTLYDDDDK-DRWGSRKIVVVGGVAGGASVAARLRRLS-EEDEIIMVERGEYISFANCGLPY-YIGGVITER 91 (588)
T ss_dssp --------------------CCCCEEEEECCSHHHHHHHHHHHHHC-SSSEEEEECSSSCSSBCGGGHHH-HHTTSSCCG
T ss_pred cccchhcCccccCcccC-CcccCCCEEEECCcHHHHHHHHHHHhhC-cCCCEEEEECCCCccccCCCCch-hhcCcCCCh
Confidence 45677766665543222 2356689999999999999999999993 23399999999887766543322 111100000
Q ss_pred CCCCCcccccCCCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcC---CCc--EEecCcEEEeeCCCCccCCCCCCC
Q 021871 109 ARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITN---SGK--LLKYGSLIVATGCTASRFPEKIGG 183 (306)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~---~g~--~~~~~~lila~G~~~~~~~~~~~~ 183 (306)
. .....++..+.++.+++++++++|.+++.+...+.+. ++. .+.||++|+|||+.+.. |++++.
T Consensus 92 ~----------~~~~~~~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~-p~i~G~ 160 (588)
T 3ics_A 92 Q----------KLLVQTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIV-PSIPGI 160 (588)
T ss_dssp G----------GGBSSCHHHHHHHTTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECC-CCCTTT
T ss_pred H----------HhhccCHHHHHHhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCCC-CCCCCc
Confidence 0 0012345556678899999999999999988876653 455 78999999999998774 567775
Q ss_pred -CCCCEEEEccHHHHHHHHHhh--hcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHH
Q 021871 184 -YLPGVHYIRDVADADALISSL--EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQ 260 (306)
Q Consensus 184 -~~~g~~~~~~~~~~~~~~~~~--~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (306)
+.+++...+.+.+...+...+ ..+++++|||+|.+|+|+|..+...+.+|+++.+.+.+++. +++.+.+.+.+.++
T Consensus 161 ~~~~~v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~ 239 (588)
T 3ics_A 161 EEAKALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP-IDYEMAAYVHEHMK 239 (588)
T ss_dssp TTCTTEEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHH
T ss_pred ccCCCeEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc-CCHHHHHHHHHHHH
Confidence 567777777777776665544 35899999999999999999999999999999999999887 78999999999999
Q ss_pred HcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 261 QNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 261 ~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+.||++++++.|++++.. ++ +|.+.+|+++++|.||+|+|.
T Consensus 240 ~~GV~i~~~~~v~~i~~~-~~---~v~~~~g~~i~~D~Vi~a~G~ 280 (588)
T 3ics_A 240 NHDVELVFEDGVDALEEN-GA---VVRLKSGSVIQTDMLILAIGV 280 (588)
T ss_dssp HTTCEEECSCCEEEEEGG-GT---EEEETTSCEEECSEEEECSCE
T ss_pred HcCCEEEECCeEEEEecC-CC---EEEECCCCEEEcCEEEEccCC
Confidence 999999999999999853 22 477889999999999999985
No 14
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.97 E-value=2.3e-29 Score=232.76 Aligned_cols=239 Identities=18% Similarity=0.309 Sum_probs=186.1
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHHh
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 131 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (306)
+||+|||||++||++|++|++++ +..+|+|+|+++..+|..+.++. ++........ .........+.+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~-~~~~V~lie~~~~~~~~~~~l~~-~~~~~~~~~~----------~~~~~~~~~~~~ 69 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLS-ETAEIIMFERGEYVSFANCGLPY-HISGEIAQRS----------ALVLQTPESFKA 69 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC-SSSEEEEECSSSCSSBCGGGHHH-HHTSSSCCGG----------GGBCCCHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhhC-cCCCEEEEECCCCccccccCchH-HhcCCcCChH----------HhhccCHHHHHH
Confidence 69999999999999999999994 24499999999887765443332 1111000000 000123344445
Q ss_pred hcCeEEEeCCcEEEEeCCCCEEEcCC---Cc--EEecCcEEEeeCCCCccCCCCCCCCCCCEEEEccHHHHHHHHHhh--
Q 021871 132 EKGIEMIYQDPVTSIDIEKQTLITNS---GK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL-- 204 (306)
Q Consensus 132 ~~~v~~~~~~~v~~v~~~~~~v~~~~---g~--~~~~~~lila~G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-- 204 (306)
+.+++++++++|.+++...+.+.+.+ +. .+.||+||+|||+.+.. |++++.+.+++...+.+.+.+.+.+.+
T Consensus 70 ~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~-p~ipG~~~~~v~~~~~~~~~~~l~~~~~~ 148 (565)
T 3ntd_A 70 RFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIV-PPIPGVDNPLTHSLRNIPDMDRILQTIQM 148 (565)
T ss_dssp HHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECC-CCCTTCCSTTEECCSSHHHHHHHHHHHHH
T ss_pred hcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCC-CCCCCCCCCCEEEeCCHHHHHHHHHHHhh
Confidence 58999999999999999888766543 43 78999999999998774 567776667777777777776666543
Q ss_pred hcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeC------
Q 021871 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAG------ 278 (306)
Q Consensus 205 ~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~------ 278 (306)
..+++++|||+|.+|+|+|..+.+.+.+|+++.+.+.+++. +++.+.+.+.+.++++||++++++.|++++.+
T Consensus 149 ~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~ 227 (565)
T 3ntd_A 149 NNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTP-VDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVA 227 (565)
T ss_dssp TTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTT-SCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchh-cCHHHHHHHHHHHHHCCCEEEeCCeEEEEecccccccc
Confidence 34789999999999999999999999999999999998884 78999999999999999999999999999862
Q ss_pred ------------CCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 279 ------------SDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 279 ------------~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+++.+ .+.+.+|+++++|.||+|+|.
T Consensus 228 ~~~~~~~~~~~~~~~~~-~v~~~~g~~i~~D~vi~a~G~ 265 (565)
T 3ntd_A 228 SDAAGEDTAHQHIKGHL-SLTLSNGELLETDLLIMAIGV 265 (565)
T ss_dssp CGGGTCCCTTCCTTCEE-EEEETTSCEEEESEEEECSCE
T ss_pred ccccccccccccCCCcE-EEEEcCCCEEEcCEEEECcCC
Confidence 24444 577788989999999999985
No 15
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.97 E-value=3e-29 Score=225.53 Aligned_cols=237 Identities=25% Similarity=0.351 Sum_probs=179.7
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
+++||+|||||++|+++|++|++.+ +..+|+|+|+++...+....++. ++... .... .......+.
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~-~~~~V~vie~~~~~~~~~~~~p~-~~~~~-~~~~-----------~~~~~~~~~ 67 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLK-PEWDVKVFEATEWVSHAPCGIPY-VVEGL-STPD-----------KLMYYPPEV 67 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHC-TTSEEEEECSSSCCC-------------------------------------CT
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhC-cCCCEEEEECCCccccCCcCCcc-ccCCC-CCHH-----------HhhhcCHHH
Confidence 3579999999999999999999984 23499999999876554322221 11000 0000 001222233
Q ss_pred H-hhcCeEEEeCCcEEEEeCCCCEEEcCCC-cEEecCcEEEeeCCCCccCCCCCCCCCCCEEEEccHHHHHHHHHhhh--
Q 021871 130 Y-KEKGIEMIYQDPVTSIDIEKQTLITNSG-KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLE-- 205 (306)
Q Consensus 130 ~-~~~~v~~~~~~~v~~v~~~~~~v~~~~g-~~~~~~~lila~G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-- 205 (306)
+ ++.+++++++++|..++.....+.++++ ..+.||+||+|||+.+. .|++++.+.+++...+...+...+.+...
T Consensus 68 ~~~~~gi~v~~~~~v~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~-~p~i~G~~~~~v~~~~~~~~~~~~~~~~~~~ 146 (449)
T 3kd9_A 68 FIKKRGIDLHLNAEVIEVDTGYVRVRENGGEKSYEWDYLVFANGASPQ-VPAIEGVNLKGVFTADLPPDALAIREYMEKY 146 (449)
T ss_dssp HHHHTTCEEETTCEEEEECSSEEEEECSSSEEEEECSEEEECCCEEEC-CCSCBTTTSTTEECSCSTHHHHHHHHHHSSS
T ss_pred HHHhcCcEEEecCEEEEEecCCCEEEECCceEEEEcCEEEECCCCCCC-CCCCCCCCCCCEEEeCCHHHHHHHHHHHHhc
Confidence 4 6789999999999999988888888777 48999999999999887 46677776777776666666666665554
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEE
Q 021871 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAA 285 (306)
Q Consensus 206 ~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~ 285 (306)
.+++++|||+|.+|+|+|..+.+.+.+|+++.+.+++++..+++.+.+.+.+.++++ |+++.++.|.+++. ++ .+..
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~-~~-~v~~ 223 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITMKIEG-EE-RVEK 223 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEEEEEC-SS-SCCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEec-cC-cEEE
Confidence 678999999999999999999999999999999999998767999999999999998 99999999999985 23 4433
Q ss_pred EEeCCCCEEecCEEEEecCC
Q 021871 286 VKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 286 v~~~~G~~i~~d~vv~a~g~ 305 (306)
+ ..+|+++++|.||+|+|.
T Consensus 224 v-~~~g~~i~~D~Vv~a~G~ 242 (449)
T 3kd9_A 224 V-VTDAGEYKAELVILATGI 242 (449)
T ss_dssp E-EETTEEEECSEEEECSCE
T ss_pred E-EeCCCEEECCEEEEeeCC
Confidence 4 445678999999999985
No 16
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.97 E-value=7e-30 Score=231.83 Aligned_cols=253 Identities=23% Similarity=0.391 Sum_probs=187.8
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCC------CCCCCccc---ccC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKP------ARLPGFHT---CVG 119 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~---~~~ 119 (306)
+..+||+|||||++|+++|..|++.+. ..+|+|||+++..+|.++...+.++....... ..++.... ...
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~-g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDP-GARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQP 87 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHST-TCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCC-CCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccc
Confidence 445799999999999999999998842 44999999998877776544333322211000 00000000 000
Q ss_pred CCCCcCChhH--HhhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCC----CCCEEEEcc
Q 021871 120 SGGERQTPEW--YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY----LPGVHYIRD 193 (306)
Q Consensus 120 ~~~~~~~~~~--~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~----~~g~~~~~~ 193 (306)
...+.....+ +.+.+++++++++|..++...+.+.+++|..+.||+||+|||+.+..+| .++.. .+++..++.
T Consensus 88 ~~~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~p~~~~-~~~~~~~~~~~~v~~~~~ 166 (493)
T 1m6i_A 88 PSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLS-AIDRAGAEVKSRTTLFRK 166 (493)
T ss_dssp GGGSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEEECCCH-HHHTSCHHHHHTEEECCS
T ss_pred hHhhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCCC-CcccccccccCceEEEcC
Confidence 0000000011 2356899999999999999888999999989999999999999887533 33311 346777777
Q ss_pred HHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHh----CCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcC
Q 021871 194 VADADALISSLEKAKKVVVVGGGYIGMEVAAAAVG----WKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKG 269 (306)
Q Consensus 194 ~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~ 269 (306)
..+...+......+++++|||+|.+|+|+|..+.+ .+.+|+++.+.+.++++.+++.+.+.+.+.++++||+++++
T Consensus 167 ~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~ 246 (493)
T 1m6i_A 167 IGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPN 246 (493)
T ss_dssp HHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEECS
T ss_pred HHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHHHhcCCEEEeC
Confidence 77777777766779999999999999999999987 46789999998887777678899999999999999999999
Q ss_pred ceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 270 ASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 270 ~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+.|++++. +++.+ .|++.+|+++++|.||+|+|.
T Consensus 247 ~~V~~i~~-~~~~~-~v~l~dG~~i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 247 AIVQSVGV-SSGKL-LIKLKDGRKVETDHIVAAVGL 280 (493)
T ss_dssp CCEEEEEE-ETTEE-EEEETTSCEEEESEEEECCCE
T ss_pred CEEEEEEe-cCCeE-EEEECCCCEEECCEEEECCCC
Confidence 99999985 34444 688999999999999999985
No 17
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.97 E-value=4.2e-29 Score=224.44 Aligned_cols=235 Identities=20% Similarity=0.284 Sum_probs=183.3
Q ss_pred CcEEEEcCChHHHHHHHHHHHc--CCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 52 REFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~--g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
+||+|||||++|+++|..|++. |. +|+|+|+++..+|..+.+.. ++... ...... .......+
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~---~V~lie~~~~~~~~~~~~~~-~~~~~------~~~~~~-----~~~~~~~~ 65 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDA---EIQWYEKGDFISFLSAGMQL-YLEGK------VKDVNS-----VRYMTGEK 65 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTS---EEEEEESSSSSSBCGGGHHH-HHTTS------SCCGGG-----SBSCCHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCC---eEEEEECCCccCcccccchh-hhcCc------cCCHHH-----hhcCCHHH
Confidence 4899999999999999999998 55 99999998876543222111 11000 001111 12345677
Q ss_pred HhhcCeEEEeCCcEEEEeCCCCEEEcCC---Cc--EEecCcEEEeeCCCCccCCCCCCCCCCCEEEEccHHHHHHHHHhh
Q 021871 130 YKEKGIEMIYQDPVTSIDIEKQTLITNS---GK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL 204 (306)
Q Consensus 130 ~~~~~v~~~~~~~v~~v~~~~~~v~~~~---g~--~~~~~~lila~G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 204 (306)
+++.+++++.+..+..++.+.+.+.+.+ |+ .+.||++|+|||+.+.. |++|+.+.+++.+.++..+...+.+.+
T Consensus 66 ~~~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~-p~i~G~~~~~v~~~~~~~~~~~l~~~~ 144 (447)
T 1nhp_A 66 MESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFE-LDIPGKDLDNIYLMRGRQWAIKLKQKT 144 (447)
T ss_dssp HHHTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECC-CCSTTTTSBSEECCCHHHHHHHHHHHH
T ss_pred HHHCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCC-CCCCCCCCCCeEEECCHHHHHHHHHHh
Confidence 8888999988999999998887776643 54 48999999999998874 567776566776666666666666655
Q ss_pred h--cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCc
Q 021871 205 E--KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGR 282 (306)
Q Consensus 205 ~--~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~ 282 (306)
. .+++++|||+|.+|+++|..+.+.+.+|+++.+.+.+++..+++.+.+.+.+.+++.||+++++++|++++. + +.
T Consensus 145 ~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~-~~ 222 (447)
T 1nhp_A 145 VDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEG-D-GR 222 (447)
T ss_dssp TCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEEC-S-SB
T ss_pred hhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEc-c-Cc
Confidence 5 689999999999999999999999999999999999888557899999999999999999999999999995 3 44
Q ss_pred EEEEEeCCCCEEecCEEEEecCC
Q 021871 283 VAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 283 v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+..+.+ +|+++++|.||+|+|.
T Consensus 223 v~~v~~-~~~~i~~d~vi~a~G~ 244 (447)
T 1nhp_A 223 VQKVVT-DKNAYDADLVVVAVGV 244 (447)
T ss_dssp CCEEEE-SSCEEECSEEEECSCE
T ss_pred EEEEEE-CCCEEECCEEEECcCC
Confidence 434666 4568999999999985
No 18
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.97 E-value=3.7e-29 Score=226.64 Aligned_cols=256 Identities=22% Similarity=0.343 Sum_probs=181.0
Q ss_pred ccCccccccccceeeecccCCCCCcEEEEcCChHHHHHHHHHHHc--CCCCCcEEEeccCCCCCCCCCccccccccCCCC
Q 021871 29 HSSAKNFQRRGFVVAYSSFANENREFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEAYAPYERPALTKGYLFPLDK 106 (306)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~vvIIGgG~aGl~aA~~L~~~--g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~ 106 (306)
-..||...++..... ......++||+|||||++|+++|.+|++. |. +|+|+|+++...|..+.++. ++...
T Consensus 15 ~~~np~~g~~~~~~~-~~~~~~~~dvvIIG~G~aGl~aA~~l~~~~~g~---~V~lie~~~~~~~~~~~~~~-~~~~~-- 87 (480)
T 3cgb_A 15 MTGGQQMGRTLYDDD-DKDRWGSMNYVIIGGDAAGMSAAMQIVRNDENA---NVVTLEKGEIYSYAQCGLPY-VISGA-- 87 (480)
T ss_dssp -----------------------CEEEEECCSHHHHHHHHHHHHHCTTC---EEEEECSSSCCSBCGGGHHH-HHTTS--
T ss_pred ccchhhhcccccCCC-CcCccccceEEEECCCHHHHHHHHHHHhhCcCC---cEEEEECCCCCCCCCCCcch-hhcCC--
Confidence 455666655543221 11122347999999999999999999997 55 99999998876554332221 11110
Q ss_pred CCCCCCCcccccCCCCCcCChhHH-hhcCeEEEeCCcEEEEeCCCCEEEcC---CCc--EEecCcEEEeeCCCCccCCCC
Q 021871 107 KPARLPGFHTCVGSGGERQTPEWY-KEKGIEMIYQDPVTSIDIEKQTLITN---SGK--LLKYGSLIVATGCTASRFPEK 180 (306)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~v~~v~~~~~~v~~~---~g~--~~~~~~lila~G~~~~~~~~~ 180 (306)
...+..+ .......+ ++.+++++.+.+|..++.+.+.+.+. +|+ .+.||++|+|+|+.+.. |++
T Consensus 88 ----~~~~~~l-----~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~-p~i 157 (480)
T 3cgb_A 88 ----IASTEKL-----IARNVKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVM-PEW 157 (480)
T ss_dssp ----SSCGGGG-----BSSCHHHHHHTTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECC-CCC
T ss_pred ----cCCHHHh-----hhcCHHHHHhhcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccC-CCC
Confidence 0011111 12344555 44599999888999999887776654 365 79999999999998874 567
Q ss_pred CCCCCCCEEEEccHHHHHHHHHhhh--cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHH
Q 021871 181 IGGYLPGVHYIRDVADADALISSLE--KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQL 258 (306)
Q Consensus 181 ~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (306)
++.+.+++.++....+...+.+.+. .+++++|||+|.+|+|+|..+.+.+.+|+++.+.+.+++. +++.+.+.+.+.
T Consensus 158 ~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~ 236 (480)
T 3cgb_A 158 EGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTI-YDGDMAEYIYKE 236 (480)
T ss_dssp BTTTSBTEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSS-SCHHHHHHHHHH
T ss_pred CCccCCCEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhc-CCHHHHHHHHHH
Confidence 7765567776666666666655554 6899999999999999999999999999999999988874 789999999999
Q ss_pred HHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 259 YQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 259 ~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+++.||+++++++|++++. ++.+..+.+++ +++++|.||+|+|.
T Consensus 237 l~~~Gv~i~~~~~v~~i~~--~~~v~~v~~~~-~~i~~D~vi~a~G~ 280 (480)
T 3cgb_A 237 ADKHHIEILTNENVKAFKG--NERVEAVETDK-GTYKADLVLVSVGV 280 (480)
T ss_dssp HHHTTCEEECSCCEEEEEE--SSBEEEEEETT-EEEECSEEEECSCE
T ss_pred HHHcCcEEEcCCEEEEEEc--CCcEEEEEECC-CEEEcCEEEECcCC
Confidence 9999999999999999985 34454566654 58999999999985
No 19
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.97 E-value=2.2e-29 Score=225.28 Aligned_cols=230 Identities=18% Similarity=0.237 Sum_probs=180.0
Q ss_pred cEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHHhh
Q 021871 53 EFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKE 132 (306)
Q Consensus 53 ~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (306)
+|+|||||+||++||.+|+++|. +.+|+|+|+++...|.++.++. ++........ .........++++
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~l~~-~~~~~~~~~~----------~~~~~~~~~~~~~ 69 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDK-ESDIIIFEKDRDMSFANCALPY-VIGEVVEDRR----------YALAYTPEKFYDR 69 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCS-SSCEEEEESSSCSSBCGGGHHH-HHTTSSCCGG----------GTBCCCHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-CCcEEEEeCCCCCCCCcchhHH-HHcCCccchh----------hhhhcCHHHHHHh
Confidence 69999999999999999999984 6689999999887776544332 1111000000 0001233466788
Q ss_pred cCeEEEeCCcEEEEeCCCCEEEcCC-----CcEEecCcEEEeeCCCCccCCCCCCCCCCCEEEEccHHHHHHHHHhh--h
Q 021871 133 KGIEMIYQDPVTSIDIEKQTLITNS-----GKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL--E 205 (306)
Q Consensus 133 ~~v~~~~~~~v~~v~~~~~~v~~~~-----g~~~~~~~lila~G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~ 205 (306)
.+++++.+++|..++...+.+.+.+ +..+.||+||+|||+.++. |.+++ ++.+.++.+.++..+...+ .
T Consensus 70 ~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~-p~i~g---~~~~~~~~~~~~~~l~~~~~~~ 145 (437)
T 4eqs_A 70 KQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANS-LGFES---DITFTLRNLEDTDAIDQFIKAN 145 (437)
T ss_dssp HCCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECC-CCCCC---TTEECCSSHHHHHHHHHHHHHH
T ss_pred cCCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCcccc-ccccC---ceEEeeccHHHHHHHHHhhhcc
Confidence 8999999999999999887665432 2368999999999998874 33332 4556666677776665543 3
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEE
Q 021871 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAA 285 (306)
Q Consensus 206 ~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~ 285 (306)
.+++++|+|+|.+|+|+|..+.+.+.+|+++.+.+++++. +++.+.+.+.+.++++||++++++.|++++.. .
T Consensus 146 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~-~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~------~ 218 (437)
T 4eqs_A 146 QVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL-MDADMNQPILDELDKREIPYRLNEEINAINGN------E 218 (437)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT-SCGGGGHHHHHHHHHTTCCEEESCCEEEEETT------E
T ss_pred CCcEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc-ccchhHHHHHHHhhccceEEEeccEEEEecCC------e
Confidence 4789999999999999999999999999999999999886 78889999999999999999999999998842 5
Q ss_pred EEeCCCCEEecCEEEEecCC
Q 021871 286 VKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 286 v~~~~G~~i~~d~vv~a~g~ 305 (306)
+.+++|+++++|.||+|+|.
T Consensus 219 v~~~~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 219 ITFKSGKVEHYDMIIEGVGT 238 (437)
T ss_dssp EEETTSCEEECSEEEECCCE
T ss_pred eeecCCeEEeeeeEEEEece
Confidence 78899999999999999985
No 20
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.96 E-value=2.9e-28 Score=221.06 Aligned_cols=231 Identities=21% Similarity=0.330 Sum_probs=170.4
Q ss_pred CCCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCCh
Q 021871 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (306)
Q Consensus 48 ~~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (306)
..++++|||||||+||+++|++|.+.++ +|+|||+++.+.|. |.++. .... . +. ...+ ...+.
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~~~~---~VtLId~~~~~~~~-PlL~~-va~G--~----l~-~~~i-----~~p~~ 101 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDTKKY---NVSIISPRSYFLFT-PLLPS-APVG--T----VD-EKSI-----IEPIV 101 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCTTTC---EEEEEESSSEEECG-GGGGG-TTTT--S----SC-GGGG-----EEEHH
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhhCCC---cEEEECCCCCcccc-cchhH-Hhhc--c----cc-HHHh-----hhhHH
Confidence 3456799999999999999999988776 99999999876553 22211 0000 0 00 0000 01122
Q ss_pred hHH--hhcCeEEEeCCcEEEEeCCCCEEEcC--------------------CCcEEecCcEEEeeCCCCccCCCCCCCCC
Q 021871 128 EWY--KEKGIEMIYQDPVTSIDIEKQTLITN--------------------SGKLLKYGSLIVATGCTASRFPEKIGGYL 185 (306)
Q Consensus 128 ~~~--~~~~v~~~~~~~v~~v~~~~~~v~~~--------------------~g~~~~~~~lila~G~~~~~~~~~~~~~~ 185 (306)
... .+.+++++.. +|++||.+.+.+.+. ++..+.||+||+|+|+.+..++ +
T Consensus 102 ~~~~~~~~~v~~~~~-~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~------i 174 (502)
T 4g6h_A 102 NFALKKKGNVTYYEA-EATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFG------I 174 (502)
T ss_dssp HHHTTCSSCEEEEEE-EEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTT------C
T ss_pred HHHHhhcCCeEEEEE-EEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCC------c
Confidence 222 2346887755 899999988877642 3568999999999999988644 4
Q ss_pred CCE----EEEccHHHHHHHHHhhh-----------------cCCeEEEEcCCHHHHHHHHHHHhCC--------------
Q 021871 186 PGV----HYIRDVADADALISSLE-----------------KAKKVVVVGGGYIGMEVAAAAVGWK-------------- 230 (306)
Q Consensus 186 ~g~----~~~~~~~~~~~~~~~~~-----------------~~~~v~viG~g~~a~e~a~~l~~~~-------------- 230 (306)
||+ ..++.+.++..+.+.+. ...+++|+|+|++|+|+|.++.+..
T Consensus 175 pG~~e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~ 254 (502)
T 4g6h_A 175 PGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEE 254 (502)
T ss_dssp TTHHHHCEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHH
T ss_pred cCcccccCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhccccccc
Confidence 553 45666777665544331 1347999999999999999987642
Q ss_pred CcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCC----EEecCEEEEecCC
Q 021871 231 LDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS----TIDADTVILLPYD 305 (306)
Q Consensus 231 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~----~i~~d~vv~a~g~ 305 (306)
.+|+++.+.+++++. +++.+.+.+.+.|+++||++++++.|++++ +++.+..+...+|+ ++++|.||||+|.
T Consensus 255 ~~V~lve~~~~il~~-~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 255 VQIHLVEALPIVLNM-FEKKLSSYAQSHLENTSIKVHLRTAVAKVE--EKQLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp CEEEEECSSSSSSTT-SCHHHHHHHHHHHHHTTCEEETTEEEEEEC--SSEEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred ceeEEeccccccccC-CCHHHHHHHHHHHHhcceeeecCceEEEEe--CCceEEEEEecCcccceeeeccCEEEEccCC
Confidence 579999999999986 899999999999999999999999999998 56666566777774 6999999999985
No 21
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.95 E-value=5e-28 Score=209.52 Aligned_cols=233 Identities=17% Similarity=0.238 Sum_probs=161.2
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCccc-ccCCCCCcCCh
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHT-CVGSGGERQTP 127 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 127 (306)
.+++||+|||||++||++|+.|++.|+ +|+|+|+.+..... .+|.+... .....+|++.. ........++.
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~vie~~~~~~~~----~gg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 91 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEI---KPILYEGMMANGIA----AGGQLTTT-TEIENFPGFPDGLTGSELMDRMR 91 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTC---CCEEECCSSBTTBC----TTCGGGGS-SEECCSTTCTTCEEHHHHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEecCCCCCCC----cCcccccc-hhhcccCCCcccCCHHHHHHHHH
Confidence 456899999999999999999999998 99999997622111 12222111 01111222221 11112234556
Q ss_pred hHHhhcCeEEEeCCcEEEEeCCCCEEE--c---CCCcEEecCcEEEeeCCCCccCCCCCCCC---CCCEEEEccHHHHHH
Q 021871 128 EWYKEKGIEMIYQDPVTSIDIEKQTLI--T---NSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADA 199 (306)
Q Consensus 128 ~~~~~~~v~~~~~~~v~~v~~~~~~v~--~---~~g~~~~~~~lila~G~~~~~~~~~~~~~---~~g~~~~~~~~~~~~ 199 (306)
..+++.+++++.++ |..++.+...+. + .++..+.||++|+|+|..+.. |.+++.. ..++.. ...
T Consensus 92 ~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~-~~~~g~~~~~~~~~~~------~~~ 163 (338)
T 3itj_A 92 EQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKR-MHLPGEETYWQKGISA------CAV 163 (338)
T ss_dssp HHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECC-CCCTTHHHHBTTTEES------CHH
T ss_pred HHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCC-CCCCCchhccCccEEE------chh
Confidence 66777899999886 999988765443 3 356689999999999998763 4444321 122222 122
Q ss_pred HHHh--hhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHc-CCEEEcCceEEEEE
Q 021871 200 LISS--LEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQN-GVKFVKGASIKNLE 276 (306)
Q Consensus 200 ~~~~--~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gv~i~~~~~v~~i~ 276 (306)
.... ...+++++|+|+|.+++|+|..|.+.+.+|+++.+.+.+.+ ...+.+.+.+. ||++++++.|++++
T Consensus 164 ~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~-------~~~~~~~l~~~~gv~i~~~~~v~~i~ 236 (338)
T 3itj_A 164 CDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA-------STIMQKRAEKNEKIEILYNTVALEAK 236 (338)
T ss_dssp HHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------CHHHHHHHHHCTTEEEECSEEEEEEE
T ss_pred cccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-------CHHHHHHHHhcCCeEEeecceeEEEE
Confidence 2222 34688999999999999999999999999999999988765 23455566555 99999999999999
Q ss_pred eCCCCcEEEEEeCC-----CCEEecCEEEEecCC
Q 021871 277 AGSDGRVAAVKLED-----GSTIDADTVILLPYD 305 (306)
Q Consensus 277 ~~~~~~v~~v~~~~-----G~~i~~d~vv~a~g~ 305 (306)
. +++.+.+|.+.+ ++++++|.||+|+|.
T Consensus 237 ~-~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 269 (338)
T 3itj_A 237 G-DGKLLNALRIKNTKKNEETDLPVSGLFYAIGH 269 (338)
T ss_dssp E-SSSSEEEEEEEETTTTEEEEEECSEEEECSCE
T ss_pred c-ccCcEEEEEEEECCCCceEEEEeCEEEEEeCC
Confidence 7 455555677665 457999999999985
No 22
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.95 E-value=3.7e-27 Score=203.99 Aligned_cols=234 Identities=18% Similarity=0.217 Sum_probs=164.7
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
+++||+|||||++|+++|++|++.|+ +|+|+|+++..+..... .++ .....+.+.+..........++...
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~~gg~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 74 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGL---SFRFVDPLPEPGGQLTA-----LYP-EKYIYDVAGFPKVYAKDLVKGLVEQ 74 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSCHHHHH-----TCT-TSEECCSTTCSSEEHHHHHHHHHHH
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCC---CEEEEeCCCCCCCeeec-----cCC-CceeeccCCCCCCCHHHHHHHHHHH
Confidence 45799999999999999999999998 99999998764311000 000 0000111222111111112344455
Q ss_pred HhhcCeEEEeCCcEEEEeCCC--CEEEcCCCcEEecCcEEEeeCCC---CccCCCCCCCC-CC--CEEEEccHHHHHHHH
Q 021871 130 YKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCT---ASRFPEKIGGY-LP--GVHYIRDVADADALI 201 (306)
Q Consensus 130 ~~~~~v~~~~~~~v~~v~~~~--~~v~~~~g~~~~~~~lila~G~~---~~~~~~~~~~~-~~--g~~~~~~~~~~~~~~ 201 (306)
+.+.+++++++++|..++... ..+.+.++..+.||+||+|+|.. +. .+.+++.. .. ++.+. +.+.
T Consensus 75 ~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~-~~~i~g~~~~~~~~~~~~--~~~~---- 147 (335)
T 2zbw_A 75 VAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPR-RIGAPGEREFEGRGVYYA--VKSK---- 147 (335)
T ss_dssp HGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEEC-CCCCTTTTTTBTTTEESS--CSCG----
T ss_pred HHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCC-CCCCCChhhccCcEEEEe--cCch----
Confidence 666789998899999988754 35677777789999999999985 43 33444422 11 22211 1111
Q ss_pred HhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCC
Q 021871 202 SSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDG 281 (306)
Q Consensus 202 ~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~ 281 (306)
....+++++|+|+|.+|+|+|..|.+.+.+|+++.+.+.+.+ .+...+.+.+.+++.||+++.++.|++++. ++
T Consensus 148 -~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~---~~~~~~~l~~~l~~~gv~v~~~~~v~~i~~--~~ 221 (335)
T 2zbw_A 148 -AEFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA---HEASVKELMKAHEEGRLEVLTPYELRRVEG--DE 221 (335)
T ss_dssp -GGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS---CHHHHHHHHHHHHTTSSEEETTEEEEEEEE--SS
T ss_pred -hhcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc---cHHHHHHHHhccccCCeEEecCCcceeEcc--CC
Confidence 112478999999999999999999999999999999988765 456777888888999999999999999996 34
Q ss_pred cEEEEEeC---CC--CEEecCEEEEecCC
Q 021871 282 RVAAVKLE---DG--STIDADTVILLPYD 305 (306)
Q Consensus 282 ~v~~v~~~---~G--~~i~~d~vv~a~g~ 305 (306)
.+.+|.+. +| +++++|.||+|+|.
T Consensus 222 ~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2zbw_A 222 RVRWAVVFHNQTQEELALEVDAVLILAGY 250 (335)
T ss_dssp SEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CeeEEEEEECCCCceEEEecCEEEEeecC
Confidence 44456665 67 57999999999985
No 23
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.95 E-value=6.6e-27 Score=201.11 Aligned_cols=226 Identities=20% Similarity=0.213 Sum_probs=160.5
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
+++||+|||||++||++|++|+++|+ +|+|+|++ . + |.+.. ......++.+..........++...
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~-~-g--------g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYML---KTLVIGET-P-G--------GQLTE-AGIVDDYLGLIEIQASDMIKVFNKH 79 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESS-T-T--------GGGGG-CCEECCSTTSTTEEHHHHHHHHHHH
T ss_pred CccCEEEECccHHHHHHHHHHHHCCC---cEEEEecc-C-C--------Ceecc-cccccccCCCCCCCHHHHHHHHHHH
Confidence 35799999999999999999999998 89999997 1 1 11100 0111112222211111222345566
Q ss_pred HhhcCeEEEeCCcEEEEeCCC--CEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCCC---CCEEEEccHHHHHHHHHhh
Q 021871 130 YKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADALISSL 204 (306)
Q Consensus 130 ~~~~~v~~~~~~~v~~v~~~~--~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~ 204 (306)
+.+.+++++. .+|.+++.+. ..+.+.++..+.||+||+|+|..+.. |.+++... +++.+. .......
T Consensus 80 ~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~-~~i~g~~~~~~~~~~~~------~~~~~~~ 151 (323)
T 3f8d_A 80 IEKYEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRK-LGVPGEQEFAGRGISYC------SVADAPL 151 (323)
T ss_dssp HHTTTCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEECC-CCCTTTTTTBTTTEESC------HHHHGGG
T ss_pred HHHcCCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCcc-CCCCchhhhcCCceEEe------ccCCHhH
Confidence 6778899888 7999998764 36777787889999999999999764 55555432 444332 1122234
Q ss_pred hcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEE
Q 021871 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 284 (306)
Q Consensus 205 ~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~ 284 (306)
..+++++|+|+|.+++|+|..+.+.+.+|+++.+.+.+.+ .+. .+.+.+++.||+++.++.|++++. + +.+.
T Consensus 152 ~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~---~~~---~~~~~~~~~gv~~~~~~~v~~i~~-~-~~~~ 223 (323)
T 3f8d_A 152 FKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA---QPI---YVETVKKKPNVEFVLNSVVKEIKG-D-KVVK 223 (323)
T ss_dssp GTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS---CHH---HHHHHHTCTTEEEECSEEEEEEEE-S-SSEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc---CHH---HHHHHHhCCCcEEEeCCEEEEEec-c-Ccee
Confidence 5689999999999999999999999999999999988776 332 223333445999999999999995 3 4454
Q ss_pred EEEeCC---CC--EEecCEEEEecCC
Q 021871 285 AVKLED---GS--TIDADTVILLPYD 305 (306)
Q Consensus 285 ~v~~~~---G~--~i~~d~vv~a~g~ 305 (306)
+|.+.+ |+ ++++|.||+|+|.
T Consensus 224 ~v~~~~~~~g~~~~~~~D~vv~a~G~ 249 (323)
T 3f8d_A 224 QVVVENLKTGEIKELNVNGVFIEIGF 249 (323)
T ss_dssp EEEEEETTTCCEEEEECSEEEECCCE
T ss_pred EEEEEECCCCceEEEEcCEEEEEECC
Confidence 677765 76 7999999999985
No 24
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.95 E-value=2.1e-27 Score=204.26 Aligned_cols=231 Identities=16% Similarity=0.194 Sum_probs=162.9
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccc-cCCCCCcCChh
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTC-VGSGGERQTPE 128 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 128 (306)
+++||+|||||++|+++|+.|++.|+ +|+|+|+....+ .+.... ....+|.+... .......++..
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~gg--------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 70 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANL---QPVLITGMEKGG--------QLTTTT--EVENWPGDPNDLTGPLLMERMHE 70 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTC---CCEEECCSSTTG--------GGGGCS--BCCCSTTCCSSCBHHHHHHHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCC---cEEEEccCCCCc--------eEecch--hhhhCCCCCCCCCHHHHHHHHHH
Confidence 45799999999999999999999998 899999652211 000000 00111222110 00111233445
Q ss_pred HHhhcCeEEEeCCcEEEEeCCCCEEE-cCCCcEEecCcEEEeeCCCCccCCCCCCCC---CCCEEEEccHHHHHHHHHhh
Q 021871 129 WYKEKGIEMIYQDPVTSIDIEKQTLI-TNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADALISSL 204 (306)
Q Consensus 129 ~~~~~~v~~~~~~~v~~v~~~~~~v~-~~~g~~~~~~~lila~G~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~ 204 (306)
.+.+.+++++.+ .+..++.....+. +.++..+.||+||+|+|..+.. |.+++.. .+++... .......
T Consensus 71 ~~~~~~~~~~~~-~v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~~-~~~~g~~~~~~~~~~~~------~~~~~~~ 142 (320)
T 1trb_A 71 HATKFETEIIFD-HINKVDLQNRPFRLNGDNGEYTCDALIIATGASARY-LGLPSEEAFKGRGVSAC------ATSDGFF 142 (320)
T ss_dssp HHHHTTCEEECC-CEEEEECSSSSEEEEESSCEEEEEEEEECCCEEECC-CCCHHHHHTBTTTEESC------HHHHGGG
T ss_pred HHHHCCCEEEEe-eeeEEEecCCEEEEEeCCCEEEcCEEEECCCCCcCC-CCCCChHHhCCceeEec------ccCCccc
Confidence 566789999887 4888887654333 5567789999999999998763 4443321 1223221 1222234
Q ss_pred hcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEE
Q 021871 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 284 (306)
Q Consensus 205 ~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~ 284 (306)
..+++++|||+|.+|+|+|..|.+.+.+|+++.+.+.+.. ++.+.+.+.+.+++.||+++++++|++++. +++.+.
T Consensus 143 ~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~~~~v~ 218 (320)
T 1trb_A 143 YRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA---EKILIKRLMDKVENGNIILHTNRTLEEVTG-DQMGVT 218 (320)
T ss_dssp GTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC---CHHHHHHHHHHHHTSSEEEECSCEEEEEEE-CSSSEE
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc---CHHHHHHHHHhcccCCeEEEcCceeEEEEc-CCCceE
Confidence 5689999999999999999999999999999999887653 677888888889999999999999999996 444555
Q ss_pred EEEeCC----C--CEEecCEEEEecCC
Q 021871 285 AVKLED----G--STIDADTVILLPYD 305 (306)
Q Consensus 285 ~v~~~~----G--~~i~~d~vv~a~g~ 305 (306)
+|.+.+ | +++++|.||+|+|.
T Consensus 219 ~v~~~~~~~~g~~~~i~~D~vv~a~G~ 245 (320)
T 1trb_A 219 GVRLRDTQNSDNIESLDVAGLFVAIGH 245 (320)
T ss_dssp EEEEECCTTCCCCEEEECSEEEECSCE
T ss_pred EEEEEeccCCCceEEEEcCEEEEEeCC
Confidence 676654 4 47999999999985
No 25
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.95 E-value=2.9e-27 Score=206.71 Aligned_cols=237 Identities=21% Similarity=0.277 Sum_probs=165.6
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChh
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (306)
++.+||+|||||++|+++|+.|++.|+ +|+|+|+.+..+.... ...+ .......+++...........+..
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~~gg~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 82 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNI---SCRIIESMPQLGGQLA-----ALYP-EKHIYDVAGFPEVPAIDLVESLWA 82 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCHHHH-----HTCT-TSEECCSTTCSSEEHHHHHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC---CEEEEecCCCCCCccc-----ccCC-CcccccCCCCCCCCHHHHHHHHHH
Confidence 346899999999999999999999998 9999999866421000 0000 001111222211111111234445
Q ss_pred HHhhcCeEEEeCCcEEEEeCCC---CEEEcCCCcEEecCcEEEeeCCCCc--cCCCCCC-C-CCCC--EEEEccHHHHHH
Q 021871 129 WYKEKGIEMIYQDPVTSIDIEK---QTLITNSGKLLKYGSLIVATGCTAS--RFPEKIG-G-YLPG--VHYIRDVADADA 199 (306)
Q Consensus 129 ~~~~~~v~~~~~~~v~~v~~~~---~~v~~~~g~~~~~~~lila~G~~~~--~~~~~~~-~-~~~g--~~~~~~~~~~~~ 199 (306)
.+++.+++++++++|..++... ..+.+.++..+.||+||+|+|.... ..+.+++ . ...+ +.+. +.+.
T Consensus 83 ~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~--~~~~-- 158 (360)
T 3ab1_A 83 QAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYA--VKSV-- 158 (360)
T ss_dssp HHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESS--CSCG--
T ss_pred HHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEe--cCCH--
Confidence 5666789999899999998753 3677888888999999999998432 1234444 2 2222 3221 1111
Q ss_pred HHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCC
Q 021871 200 LISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGS 279 (306)
Q Consensus 200 ~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~ 279 (306)
....+++++|||+|.+++|+|..|.+.+.+|+++.+.+.+.+ .+.+.+.+.+.+++.||+++.+++|++++. +
T Consensus 159 ---~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~---~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~-~ 231 (360)
T 3ab1_A 159 ---EDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG---HGKTAHEVERARANGTIDVYLETEVASIEE-S 231 (360)
T ss_dssp ---GGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS---CSHHHHSSHHHHHHTSEEEESSEEEEEEEE-E
T ss_pred ---HHcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC---CHHHHHHHHHHhhcCceEEEcCcCHHHhcc-C
Confidence 112478999999999999999999999999999999988765 245667788888899999999999999996 4
Q ss_pred CCcEEEEEeC--CC--CEEecCEEEEecCC
Q 021871 280 DGRVAAVKLE--DG--STIDADTVILLPYD 305 (306)
Q Consensus 280 ~~~v~~v~~~--~G--~~i~~d~vv~a~g~ 305 (306)
++++.+|.+. +| +.+++|.||+|+|.
T Consensus 232 ~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~ 261 (360)
T 3ab1_A 232 NGVLTRVHLRSSDGSKWTVEADRLLILIGF 261 (360)
T ss_dssp TTEEEEEEEEETTCCEEEEECSEEEECCCB
T ss_pred CCceEEEEEEecCCCeEEEeCCEEEECCCC
Confidence 5655556664 77 57999999999985
No 26
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.8e-27 Score=215.50 Aligned_cols=240 Identities=19% Similarity=0.268 Sum_probs=167.8
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCcccccccc-----------C--CCCCCCCC-----
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLF-----------P--LDKKPARL----- 111 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~-----------~--~~~~~~~~----- 111 (306)
..+||+|||||++|+++|++|++.|+ +|+|+|++..-+- + .+.|++. . .......+
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~---~V~liE~~~~GG~--~-~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~ 83 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGA---KTLLVEAKALGGT--C-VNVGCVPKKVMWYASDLATRVSHANEYGLYQNLP 83 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSC---CEEEEESSCTTHH--H-HHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCC---cEEEEeCCCcCCc--C-cccCcHHHHHHHHHHHHHHHHHhHHhcCcccccc
Confidence 35799999999999999999999998 9999999742110 0 0000000 0 00000000
Q ss_pred -------CCcccccC------CCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcCCCc--EEecCcEEEeeCCCCcc
Q 021871 112 -------PGFHTCVG------SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGK--LLKYGSLIVATGCTASR 176 (306)
Q Consensus 112 -------~~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~--~~~~~~lila~G~~~~~ 176 (306)
..+..... ......+...+++.+++++.+ .+..++.....+.+.++. .+.||+||+|||+.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~ 162 (479)
T 2hqm_A 84 LDKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFG-WARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIF 162 (479)
T ss_dssp CSGGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEE-EEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEECC
T ss_pred cccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCC
Confidence 00000000 000001223355678998877 466666555566666665 79999999999998874
Q ss_pred CCCCCCCCCCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHH
Q 021871 177 FPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYE 256 (306)
Q Consensus 177 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 256 (306)
++++++ ... ..+++.+......+++++|||+|.+|+|+|..+.+.+.+|+++.+.+.+++. +++.+.+.+.
T Consensus 163 p~~i~g-----~~~---~~~~~~~~~l~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~ 233 (479)
T 2hqm_A 163 PENIPG-----FEL---GTDSDGFFRLEEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK-FDECIQNTIT 233 (479)
T ss_dssp CTTSTT-----GGG---SBCHHHHHHCSSCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHH
T ss_pred CCCCCC-----ccc---ccchHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc-cCHHHHHHHH
Confidence 314443 211 1234455544456899999999999999999999999999999999998876 7999999999
Q ss_pred HHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCC-CEEecCEEEEecCC
Q 021871 257 QLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG-STIDADTVILLPYD 305 (306)
Q Consensus 257 ~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G-~~i~~d~vv~a~g~ 305 (306)
+.+++.||+++++++|++++..+++.+..|.+.+| +++++|.||+|+|.
T Consensus 234 ~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 234 DHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp HHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCE
T ss_pred HHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCC
Confidence 99999999999999999998644553346888898 78999999999985
No 27
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.95 E-value=2e-25 Score=204.06 Aligned_cols=240 Identities=20% Similarity=0.250 Sum_probs=170.7
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccc--------------------cC-CCCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYL--------------------FP-LDKK 107 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~--------------------~~-~~~~ 107 (306)
+.++||+|||||++|+++|++|++.|+ +|+|+|+++..+-. + ...+++ +. +...
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~---~V~liE~~~~~GG~-~-~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~ 115 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGG---RQLIVDRWPFLGGS-C-PHNACVPHHLFSDCAAELMLARTFSGQYWFPDM 115 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSSCH-H-HHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCC---CEEEEeCCCCCCCc-c-cccCcCchHHHHHHHHHHHHHhhhhhcCcHHHH
Confidence 456899999999999999999999998 99999998743210 0 000000 00 0000
Q ss_pred CCCCCCcccccCCCCCcCCh---hHH-----hhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCccCCC
Q 021871 108 PARLPGFHTCVGSGGERQTP---EWY-----KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPE 179 (306)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~---~~~-----~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~~~~ 179 (306)
...++...... ........ .++ ++.+++++++.++..++. ..+.+. +..+.||++|+|||+.+.. |+
T Consensus 116 ~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~--~~v~~~-g~~~~~d~lViATGs~p~~-p~ 190 (523)
T 1mo9_A 116 TEKVVGIKEVV-DLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN--HTVEAA-GKVFKAKNLILAVGAGPGT-LD 190 (523)
T ss_dssp TTCCCCHHHHH-HHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET--TEEEET-TEEEEBSCEEECCCEECCC-CC
T ss_pred HhhhhhHHHHH-HHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC--CEEEEC-CEEEEeCEEEECCCCCCCC-CC
Confidence 00000000000 00000122 445 677899885668877775 466665 6689999999999998874 55
Q ss_pred CCCCCCCCEEEEccHHHHHHHH-HhhhcC-CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHH
Q 021871 180 KIGGYLPGVHYIRDVADADALI-SSLEKA-KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQ 257 (306)
Q Consensus 180 ~~~~~~~g~~~~~~~~~~~~~~-~~~~~~-~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 257 (306)
+++.+.+++. +...+. +....+ ++++|||+|.+|+|+|..+.+.+.+|+++.+.+.+++. +++.+.+.+.+
T Consensus 191 i~G~~~~~v~------~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~~~~l~~ 263 (523)
T 1mo9_A 191 VPGVNAKGVF------DHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI-KDNETRAYVLD 263 (523)
T ss_dssp STTTTSBTEE------EHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC-CSHHHHHHHHH
T ss_pred CCCcccCcEe------eHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc-ccHHHHHHHHH
Confidence 6664444443 233333 222345 89999999999999999999999999999999998886 78999999999
Q ss_pred HHHHcCCEEEcCceEEEEEeCCCCcE--EEEEeCCCC-EEecCEEEEecCC
Q 021871 258 LYQQNGVKFVKGASIKNLEAGSDGRV--AAVKLEDGS-TIDADTVILLPYD 305 (306)
Q Consensus 258 ~~~~~gv~i~~~~~v~~i~~~~~~~v--~~v~~~~G~-~i~~d~vv~a~g~ 305 (306)
.+++.||+++++++|++++..+++++ ..|++.+|+ ++++|.||+|+|.
T Consensus 264 ~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 264 RMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGE 314 (523)
T ss_dssp HHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCC
T ss_pred HHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCC
Confidence 99999999999999999996445543 368888887 8999999999996
No 28
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.94 E-value=9e-26 Score=203.89 Aligned_cols=234 Identities=15% Similarity=0.228 Sum_probs=166.7
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccc-----------------cCC------CC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYL-----------------FPL------DK 106 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~-----------------~~~------~~ 106 (306)
.++||+|||||++|+++|++|++.|+ +|+|+|++. .+-. ....|++ .+. ..
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~---~V~lie~~~-~GG~--~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~ 76 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGA---QVTLIERGT-IGGT--CVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATV 76 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSS-TTHH--HHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCC-CCcc--ccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCC
Confidence 46899999999999999999999998 999999983 2100 0000000 000 00
Q ss_pred CCCCCCCcccccCC------CCC-cCChhHHhhc-CeEEEeCCcEEEEeCCCCEEEcCCC--cEEecCcEEEeeCCCCcc
Q 021871 107 KPARLPGFHTCVGS------GGE-RQTPEWYKEK-GIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASR 176 (306)
Q Consensus 107 ~~~~~~~~~~~~~~------~~~-~~~~~~~~~~-~v~~~~~~~v~~v~~~~~~v~~~~g--~~~~~~~lila~G~~~~~ 176 (306)
...+ +..+... ... .....++++. +++++.+ ++..++.....+.+.+| ..++||++|+|||+.+..
T Consensus 77 ~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~ 152 (467)
T 1zk7_A 77 PTID---RSKLLAQQQARVDELRHAKYEGILGGNPAITVVHG-EARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAV 152 (467)
T ss_dssp CCCC---HHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEE-EEEEEETTEEEEEETTSSEEEEECSEEEECCCEEECC
T ss_pred CccC---HHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEE-EEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCCC
Confidence 0000 1000000 000 0123445566 8998876 57777766566777777 679999999999998874
Q ss_pred CCCCCCCCCCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHH
Q 021871 177 FPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYE 256 (306)
Q Consensus 177 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 256 (306)
|++++.+...+ .+...+.+....+++++|||+|.+|+|+|..+.+.+.+|+++.+.+.+++ +++.+.+.+.
T Consensus 153 -p~i~G~~~~~~------~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~~~~~~~l~ 223 (467)
T 1zk7_A 153 -PPIPGLKESPY------WTSTEALASDTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR--EDPAIGEAVT 223 (467)
T ss_dssp -CCCTTTTTSCC------BCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT--SCHHHHHHHH
T ss_pred -CCCCCCCcCce------ecHHHHhcccccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC--CCHHHHHHHH
Confidence 55555322221 23444444444689999999999999999999999999999999999888 6899999999
Q ss_pred HHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 257 QLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 257 ~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+.++++||+++++++|++++. +++.+ .|.++ ++++++|.||+|+|.
T Consensus 224 ~~l~~~Gv~i~~~~~v~~i~~-~~~~~-~v~~~-~~~i~aD~Vv~a~G~ 269 (467)
T 1zk7_A 224 AAFRAEGIEVLEHTQASQVAH-MDGEF-VLTTT-HGELRADKLLVATGR 269 (467)
T ss_dssp HHHHHTTCEEETTCCEEEEEE-ETTEE-EEEET-TEEEEESEEEECSCE
T ss_pred HHHHhCCCEEEcCCEEEEEEE-eCCEE-EEEEC-CcEEEcCEEEECCCC
Confidence 999999999999999999986 33333 57776 458999999999985
No 29
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.94 E-value=6.3e-27 Score=212.02 Aligned_cols=243 Identities=19% Similarity=0.237 Sum_probs=165.7
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCC--CCCccc-----------------cccccCCCCCCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY--ERPALT-----------------KGYLFPLDKKPA 109 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~--~~~~~~-----------------~~~~~~~~~~~~ 109 (306)
+.++||+|||||++|+++|++|++.|+ +|+|+|++..-+- .....+ ..+.+.......
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~---~V~liE~~~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~ 94 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGA---RAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKF 94 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC---eEEEEecCCCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCcc
Confidence 345899999999999999999999998 9999998743110 000000 000000000000
Q ss_pred CCCCccccc---CCCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCccCC--CCCCCC
Q 021871 110 RLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFP--EKIGGY 184 (306)
Q Consensus 110 ~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~~~--~~~~~~ 184 (306)
++..+.... .......+...+++.++++..+ .+..++.....+. .++..+.||+||+|||+.+..++ +
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~~~~~~~~v~-~~g~~~~~d~lviAtG~~p~~p~~~~----- 167 (478)
T 3dk9_A 95 NWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRG-HAAFTSDPKPTIE-VSGKKYTAPHILIATGGMPSTPHESQ----- 167 (478)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEECSCSSCEEE-ETTEEEECSCEEECCCEEECCCCTTT-----
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEeeCCeEEEE-ECCEEEEeeEEEEccCCCCCCCCcCC-----
Confidence 000000000 0000011223345568888876 5555666556666 45667999999999999877431 3
Q ss_pred CCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCC
Q 021871 185 LPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGV 264 (306)
Q Consensus 185 ~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 264 (306)
++|..+ ..+++.++.....+++++|||+|.+|+|+|..+.+.+.+|+++.+.+.+++. +++.+.+.+.+.++++||
T Consensus 168 i~G~~~---~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~~~~~l~~~gv 243 (478)
T 3dk9_A 168 IPGASL---GITSDGFFQLEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRS-FDSMISTNCTEELENAGV 243 (478)
T ss_dssp STTGGG---SBCHHHHTTCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHHTTC
T ss_pred CCCCce---eEchHHhhchhhcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccc-cCHHHHHHHHHHHHHCCC
Confidence 344321 2244555444445799999999999999999999999999999999998875 799999999999999999
Q ss_pred EEEcCceEEEEEeCCCCcEEEEEeCC---C----CEEecCEEEEecCC
Q 021871 265 KFVKGASIKNLEAGSDGRVAAVKLED---G----STIDADTVILLPYD 305 (306)
Q Consensus 265 ~i~~~~~v~~i~~~~~~~v~~v~~~~---G----~~i~~d~vv~a~g~ 305 (306)
++++++.|++++..+++....+.+.+ | +.+++|.||+|+|.
T Consensus 244 ~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~ 291 (478)
T 3dk9_A 244 EVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGR 291 (478)
T ss_dssp EEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCE
T ss_pred EEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeecc
Confidence 99999999999975566233577765 2 57999999999985
No 30
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.94 E-value=9.7e-27 Score=211.71 Aligned_cols=238 Identities=19% Similarity=0.286 Sum_probs=155.5
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC-CC-CCccccc----------c-----ccCCCC-CCCCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP-YE-RPALTKG----------Y-----LFPLDK-KPARLP 112 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~-~~-~~~~~~~----------~-----~~~~~~-~~~~~~ 112 (306)
++||+|||||++|+++|++|++.|+ +|+|+|++...+ +. ....+.. . .+.... ...+++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~---~V~liE~~~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 78 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNA---KVALVEKSRLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLP 78 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSTTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHH
Confidence 4799999999999999999999998 999999985211 00 0000000 0 000000 001110
Q ss_pred CcccccC---CCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcCC-------------CcEEecCcEEEeeCCCCcc
Q 021871 113 GFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNS-------------GKLLKYGSLIVATGCTASR 176 (306)
Q Consensus 113 ~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~-------------g~~~~~~~lila~G~~~~~ 176 (306)
.+..... ......+...+++.+++++.+. +..++. +.+.+.+ +..+.||+||+|||+.+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~id~--~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~ 155 (500)
T 1onf_A 79 LLVERRDKYIQRLNNIYRQNLSKDKVDLYEGT-ASFLSE--NRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVF 155 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-CCCC----------------------------CBSSEEECCCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEeeC--CEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCC
Confidence 0000000 0000112234566789988774 333333 3444433 5579999999999998874
Q ss_pred CCCCCCCCCCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHH
Q 021871 177 FPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYE 256 (306)
Q Consensus 177 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 256 (306)
|++++. +.+ .+++.+.+... +++++|||+|.+|+|+|..+.+.+.+|+++.+.+.+++. +++.+.+.+.
T Consensus 156 -p~i~G~--~~~------~~~~~~~~~~~-~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~ 224 (500)
T 1onf_A 156 -PPVKGI--ENT------ISSDEFFNIKE-SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK-FDESVINVLE 224 (500)
T ss_dssp -CSCTTG--GGC------EEHHHHTTCCC-CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT-SCHHHHHHHH
T ss_pred -CCCCCC--Ccc------cCHHHHhccCC-CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc-cchhhHHHHH
Confidence 444442 111 12333333222 789999999999999999999999999999999998875 7999999999
Q ss_pred HHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCE-EecCEEEEecCCC
Q 021871 257 QLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGST-IDADTVILLPYDQ 306 (306)
Q Consensus 257 ~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~-i~~d~vv~a~g~~ 306 (306)
+.++++||+++++++|++++..+++.+ .|.+.+|++ +++|.||+|+|..
T Consensus 225 ~~l~~~gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~D~vi~a~G~~ 274 (500)
T 1onf_A 225 NDMKKNNINIVTFADVVEIKKVSDKNL-SIHLSDGRIYEHFDHVIYCVGRS 274 (500)
T ss_dssp HHHHHTTCEEECSCCEEEEEESSTTCE-EEEETTSCEEEEESEEEECCCBC
T ss_pred HHHHhCCCEEEECCEEEEEEEcCCceE-EEEECCCcEEEECCEEEECCCCC
Confidence 999999999999999999986444443 688889987 9999999999963
No 31
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.94 E-value=3.6e-27 Score=211.89 Aligned_cols=235 Identities=19% Similarity=0.306 Sum_probs=164.6
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccc---------------------cCC--CC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYL---------------------FPL--DK 106 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~---------------------~~~--~~ 106 (306)
+++||+|||||++|+++|++|++.|+ +|+|+|++..-+- +. +.+++ +.. ..
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~---~V~liE~~~~GG~--~~-~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~ 76 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQ---KCALIEAKELGGT--CV-NVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTI 76 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTC---CEEEEESSCTTHH--HH-HHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCC---eEEEEcCCCCCCc--cc-ccCccChHHHHHHHHHHHHHHHHHHhcCccCCC
Confidence 35799999999999999999999998 9999999742110 00 00000 000 00
Q ss_pred CCCCCCCccccc---CCCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCC
Q 021871 107 KPARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGG 183 (306)
Q Consensus 107 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~ 183 (306)
...++..+.... .......+...+++.+++++.+ ++..++. +.+.+ ++..+.||++|+|||+.+.. |+++
T Consensus 77 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~~--~~v~~-~g~~~~~d~lviAtGs~p~~-p~i~-- 149 (450)
T 1ges_A 77 NKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKG-FARFVDA--KTLEV-NGETITADHILIATGGRPSH-PDIP-- 149 (450)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CCEEEET--TEEEE-TTEEEEEEEEEECCCEEECC-CCST--
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEecC--CEEEE-CCEEEEeCEEEECCCCCCCC-CCCC--
Confidence 000000000000 0000011123346678999877 4455654 46666 66789999999999998874 4444
Q ss_pred CCCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcC
Q 021871 184 YLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNG 263 (306)
Q Consensus 184 ~~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 263 (306)
|... ..+++.+......+++++|||+|.+|+|+|..+.+.+.+|+++.+.+.+++. +++.+.+.+.+.+++.|
T Consensus 150 ---g~~~---~~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~G 222 (450)
T 1ges_A 150 ---GVEY---GIDSDGFFALPALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS-FDPMISETLVEVMNAEG 222 (450)
T ss_dssp ---TGGG---SBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHHS
T ss_pred ---Cccc---eecHHHhhhhhhcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh-hhHHHHHHHHHHHHHCC
Confidence 3211 2234444444446889999999999999999999999999999999988875 78999999999999999
Q ss_pred CEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 264 VKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 264 v~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
|+++++++|++++.++++.+ .|.+.+|+++++|.||+|+|.
T Consensus 223 v~i~~~~~v~~i~~~~~~~~-~v~~~~g~~i~~D~vv~a~G~ 263 (450)
T 1ges_A 223 PQLHTNAIPKAVVKNTDGSL-TLELEDGRSETVDCLIWAIGR 263 (450)
T ss_dssp CEEECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEECSCE
T ss_pred CEEEeCCEEEEEEEeCCcEE-EEEECCCcEEEcCEEEECCCC
Confidence 99999999999996444434 688889989999999999985
No 32
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.94 E-value=1.3e-26 Score=198.63 Aligned_cols=226 Identities=20% Similarity=0.222 Sum_probs=157.0
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEE-eccCCCCCCCCCccccccccCCCCCCCCCCCcc-cccCCCCCcCCh
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCI-VSKEAYAPYERPALTKGYLFPLDKKPARLPGFH-TCVGSGGERQTP 127 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~v-ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 127 (306)
+++||+|||||++||++|++|++.|+ +|+| +|+. ..+ |.+.. ......+|++. .........++.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~li~e~~-~~g--------G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 69 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGL---KNVVMFEKG-MPG--------GQITS-SSEIENYPGVAQVMDGISFMAPWS 69 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTC---SCEEEECSS-STT--------GGGGG-CSCBCCSTTCCSCBCHHHHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCC---CeEEEEeCC-CCC--------ceeee-eceeccCCCCCCCCCHHHHHHHHH
Confidence 46899999999999999999999998 8999 9994 221 11100 00011122221 001111123455
Q ss_pred hHHhhcCeEEEeCCcEEEEeCCC----CEE-EcCCCcEEecCcEEEeeCCCCccCCCCCCCCC---CCEEEEccHHHHHH
Q 021871 128 EWYKEKGIEMIYQDPVTSIDIEK----QTL-ITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADA 199 (306)
Q Consensus 128 ~~~~~~~v~~~~~~~v~~v~~~~----~~v-~~~~g~~~~~~~lila~G~~~~~~~~~~~~~~---~g~~~~~~~~~~~~ 199 (306)
..+++.+++++.+ +|..+ .+. ..+ ...++ .+.||++|+|+|..+. .|.+++... +++... ..
T Consensus 70 ~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~-~~~~~g~~~~~~~~~~~~------~~ 139 (315)
T 3r9u_A 70 EQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGSAPK-KAGFKGEDEFFGKGVSTC------AT 139 (315)
T ss_dssp HHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCEEEC-CCCCBTTTTTBTTTEESC------HH
T ss_pred HHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCCCCC-CCCCCChhhcCCCeEEee------ec
Confidence 6667789999877 88888 443 342 22334 8999999999999776 355555432 333322 22
Q ss_pred HHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCC
Q 021871 200 LISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGS 279 (306)
Q Consensus 200 ~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~ 279 (306)
.......+++++|+|+|.+++++|..+.+.+.+|+++.+.+.+.. .+.+ +.+.+++.||++++++.|.++.. +
T Consensus 140 ~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~---~~~~---~~~~~~~~gv~~~~~~~v~~i~~-~ 212 (315)
T 3r9u_A 140 CDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA---APST---VEKVKKNEKIELITSASVDEVYG-D 212 (315)
T ss_dssp HHGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS---CHHH---HHHHHHCTTEEEECSCEEEEEEE-E
T ss_pred ccccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC---CHHH---HHHHHhcCCeEEEeCcEEEEEEc-C
Confidence 233445689999999999999999999999999999999988743 4333 34555788999999999999986 4
Q ss_pred CCcEEEEEeC--CCC--EEecCEEEEecCC
Q 021871 280 DGRVAAVKLE--DGS--TIDADTVILLPYD 305 (306)
Q Consensus 280 ~~~v~~v~~~--~G~--~i~~d~vv~a~g~ 305 (306)
++.+.+|.+. +|+ ++++|.||+|+|.
T Consensus 213 ~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 213 KMGVAGVKVKLKDGSIRDLNVPGIFTFVGL 242 (315)
T ss_dssp TTEEEEEEEECTTSCEEEECCSCEEECSCE
T ss_pred CCcEEEEEEEcCCCCeEEeecCeEEEEEcC
Confidence 5555566665 786 7999999999985
No 33
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.94 E-value=2e-26 Score=197.24 Aligned_cols=225 Identities=21% Similarity=0.240 Sum_probs=157.8
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHHh
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 131 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (306)
+||+|||||++|+++|..|++.|+ +|+|+|+... |.+..... ...++............++...++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~---~v~li~~~~g----------G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 67 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGI---RTGLMGERFG----------GQILDTVD-IENYISVPKTEGQKLAGALKVHVD 67 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTC---CEEEECSSTT----------GGGGGCCE-ECCBTTBSSEEHHHHHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC---cEEEEeCCCC----------ceeccccc-cccccCcCCCCHHHHHHHHHHHHH
Confidence 699999999999999999999998 9999986421 11100000 000011000000111234455567
Q ss_pred hcCeEEEeCCcEEEEeCC-----CCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCC---CCCEEEEccHHHHHHHHHh
Q 021871 132 EKGIEMIYQDPVTSIDIE-----KQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADALISS 203 (306)
Q Consensus 132 ~~~v~~~~~~~v~~v~~~-----~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~ 203 (306)
+.+++++.+++|..++.+ ...+.++++..+.||++|+|+|+.+.. |.+++.. .+.+.++ ..+...
T Consensus 68 ~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~-~~~~g~~~~~~~~~~~~------~~~~~~ 140 (310)
T 1fl2_A 68 EYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRN-MNVPGEDQYRTKGVTYC------PHCDGP 140 (310)
T ss_dssp TSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECC-CCCTTTTTTBTTTEESC------HHHHGG
T ss_pred HcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCC-CCCCChhhcccceeEEe------ccCcHh
Confidence 789999999899999764 346778888889999999999998763 4455432 1223222 222234
Q ss_pred hhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHH-cCCEEEcCceEEEEEeCCCCc
Q 021871 204 LEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQ-NGVKFVKGASIKNLEAGSDGR 282 (306)
Q Consensus 204 ~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~i~~~~~v~~i~~~~~~~ 282 (306)
...+++++|+|+|.+|+|+|..|...+.+|+++.+.+.+. .++ .+.+.+++ .||+++++++|+++.. ++++
T Consensus 141 ~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~----~~~~~l~~~~gv~v~~~~~v~~i~~-~~~~ 212 (310)
T 1fl2_A 141 LFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK---ADQ----VLQDKLRSLKNVDIILNAQTTEVKG-DGSK 212 (310)
T ss_dssp GGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC---SCH----HHHHHHHTCTTEEEESSEEEEEEEE-SSSS
T ss_pred hcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC---ccH----HHHHHHhhCCCeEEecCCceEEEEc-CCCc
Confidence 4568999999999999999999999999999999998763 233 34556666 6999999999999986 4555
Q ss_pred EEEEEeCC---CC--EEecCEEEEecCC
Q 021871 283 VAAVKLED---GS--TIDADTVILLPYD 305 (306)
Q Consensus 283 v~~v~~~~---G~--~i~~d~vv~a~g~ 305 (306)
+.+|++.+ |+ ++++|.||+|+|.
T Consensus 213 v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 213 VVGLEYRDRVSGDIHNIELAGIFVQIGL 240 (310)
T ss_dssp EEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred EEEEEEEECCCCcEEEEEcCEEEEeeCC
Confidence 55566643 54 6899999999985
No 34
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.94 E-value=3.9e-26 Score=205.79 Aligned_cols=237 Identities=19% Similarity=0.314 Sum_probs=164.1
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC-CCCCc-cc-----------------cccccCCCCCCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP-YERPA-LT-----------------KGYLFPLDKKPAR 110 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~-~~~~~-~~-----------------~~~~~~~~~~~~~ 110 (306)
+++||+|||||++|+++|++|++.|+ +|+|+|++...+ +.... .+ ..+-+.......+
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~---~V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 79 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGK---RVALIESKALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLD 79 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCC---cEEEEcCCCCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcC
Confidence 45899999999999999999999998 999999974211 00000 00 0000000000011
Q ss_pred CCCcccccC---CCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCCCCC
Q 021871 111 LPGFHTCVG---SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPG 187 (306)
Q Consensus 111 ~~~~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~~~g 187 (306)
++.+..... ......+...+++.+++++.+ .+..++. +.+.+ ++..+.||++|+|||+.+.. |+++ |
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~~--~~v~~-~g~~~~~d~lviAtGs~p~~-p~i~-----G 149 (463)
T 2r9z_A 80 WPRLVAGRDRYIGAINSFWDGYVERLGITRVDG-HARFVDA--HTIEV-EGQRLSADHIVIATGGRPIV-PRLP-----G 149 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEET--TEEEE-TTEEEEEEEEEECCCEEECC-CSCT-----T
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEe-EEEEccC--CEEEE-CCEEEEcCEEEECCCCCCCC-CCCC-----C
Confidence 000000000 000001223346678998877 4555553 56666 66789999999999998774 4443 3
Q ss_pred EEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEE
Q 021871 188 VHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFV 267 (306)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~ 267 (306)
... ..+++.+.+....+++++|||+|.+|+|+|..+.+.+.+|+++.+.+.+++. +++.+.+.+.+.++++||+++
T Consensus 150 ~~~---~~~~~~~~~~~~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~gv~i~ 225 (463)
T 2r9z_A 150 AEL---GITSDGFFALQQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ-FDPLLSATLAENMHAQGIETH 225 (463)
T ss_dssp GGG---SBCHHHHHHCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHTTCEEE
T ss_pred ccc---eecHHHHhhhhccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc-cCHHHHHHHHHHHHHCCCEEE
Confidence 211 2234444444445789999999999999999999999999999999988875 789999999999999999999
Q ss_pred cCceEEEEEeCCCCcEEEEEeCCCC-EEecCEEEEecCC
Q 021871 268 KGASIKNLEAGSDGRVAAVKLEDGS-TIDADTVILLPYD 305 (306)
Q Consensus 268 ~~~~v~~i~~~~~~~v~~v~~~~G~-~i~~d~vv~a~g~ 305 (306)
++++|++++.++++ + .|++.+|+ ++++|.||+|+|.
T Consensus 226 ~~~~v~~i~~~~~~-~-~v~~~~G~~~i~~D~vv~a~G~ 262 (463)
T 2r9z_A 226 LEFAVAALERDAQG-T-TLVAQDGTRLEGFDSVIWAVGR 262 (463)
T ss_dssp SSCCEEEEEEETTE-E-EEEETTCCEEEEESEEEECSCE
T ss_pred eCCEEEEEEEeCCe-E-EEEEeCCcEEEEcCEEEECCCC
Confidence 99999999864343 3 68889998 8999999999985
No 35
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.94 E-value=1e-26 Score=200.79 Aligned_cols=228 Identities=17% Similarity=0.167 Sum_probs=160.0
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
++||+|||||++||++|+.|++.|+ +|+|+|+.+..+-... ..++ .....+++++..........++...+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~~gG~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQA---SVKIIESLPQLGGQLS-----ALYP-EKYIYDVAGFPKIRAQELINNLKEQM 77 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCHHHH-----HHCT-TSEECCSTTCSSEEHHHHHHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCC---CEEEEEcCCCCCceeh-----hcCC-CceEeccCCCCCCCHHHHHHHHHHHH
Confidence 4799999999999999999999998 9999999876431000 0000 01111222222211122234555666
Q ss_pred hhcCeEEEeCCcEEEEeCCCC---EEEcCCCcEEecCcEEEeeCC---CCccCCCCCCCCC---CCEEEEccHHHHHHHH
Q 021871 131 KEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGC---TASRFPEKIGGYL---PGVHYIRDVADADALI 201 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~~---~v~~~~g~~~~~~~lila~G~---~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~ 201 (306)
++.+++++++++|.+++.... .+.+.+++ +.||+||+|+|. .+. .|.+++... ..+.+ .+.+.
T Consensus 78 ~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~-~~~~~g~~~~~g~~~~~--~~~~~---- 149 (332)
T 3lzw_A 78 AKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPR-KLELENAEQYEGKNLHY--FVDDL---- 149 (332)
T ss_dssp TTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEEC-CCCCTTGGGGBTTTEES--SCSCG----
T ss_pred HHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCC-CCCCCChhhccCceEEE--ecCCH----
Confidence 678999999999999988654 77777776 999999999999 555 344444321 22222 12221
Q ss_pred HhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCC
Q 021871 202 SSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDG 281 (306)
Q Consensus 202 ~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~ 281 (306)
....+++++|+|+|.+++++|..+.+.+.+|+++.+.+.+.+. . ...+.++++||+++.++.|++++.+ ++
T Consensus 150 -~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~~--~-----~~~~~l~~~gv~~~~~~~v~~i~~~-~~ 220 (332)
T 3lzw_A 150 -QKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAH--E-----HSVENLHASKVNVLTPFVPAELIGE-DK 220 (332)
T ss_dssp -GGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSSC--H-----HHHHHHHHSSCEEETTEEEEEEECS-SS
T ss_pred -HHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCcc--H-----HHHHHHhcCCeEEEeCceeeEEecC-Cc
Confidence 1224789999999999999999999999999999999887542 2 2234578899999999999999963 33
Q ss_pred cEEEEEeCC-----CCEEecCEEEEecCC
Q 021871 282 RVAAVKLED-----GSTIDADTVILLPYD 305 (306)
Q Consensus 282 ~v~~v~~~~-----G~~i~~d~vv~a~g~ 305 (306)
+..|.+.+ ++++++|.||+|+|.
T Consensus 221 -~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 248 (332)
T 3lzw_A 221 -IEQLVLEEVKGDRKEILEIDDLIVNYGF 248 (332)
T ss_dssp -CCEEEEEETTSCCEEEEECSEEEECCCE
T ss_pred -eEEEEEEecCCCceEEEECCEEEEeecc
Confidence 33566655 357999999999985
No 36
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.94 E-value=1.3e-25 Score=192.94 Aligned_cols=226 Identities=22% Similarity=0.227 Sum_probs=156.2
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
+.+||+|||||++|+++|+.|++.|+ +|+|+|+....+ .+... .....+|++...........+...
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~gg---------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 81 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGF---SVAILDKAVAGG---------LTAEA-PLVENYLGFKSIVGSELAKLFADH 81 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSTTG---------GGGGC-SCBCCBTTBSSBCHHHHHHHHHHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC---cEEEEeCCCCCc---------ccccc-chhhhcCCCcccCHHHHHHHHHHH
Confidence 35799999999999999999999998 999999953211 11000 000111222000001112334455
Q ss_pred HhhcCeEEEeCCcEEEEeCCCC--EEEcCCCcEEecCcEEEeeCCCCccCCCCCCCCC---CCEEEEccHHHHHHHHHhh
Q 021871 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADALISSL 204 (306)
Q Consensus 130 ~~~~~v~~~~~~~v~~v~~~~~--~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~ 204 (306)
+++.+++++. .++..++.... .+.+ ++..+.||++|+|+|..+.. |.+++.+. +++.+.. . .....
T Consensus 82 ~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~~-~~i~g~~~~~~~~~~~~~---~---~~~~~ 152 (319)
T 3cty_A 82 AANYAKIREG-VEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHKH-LGVKGESEYFGKGTSYCS---T---CDGYL 152 (319)
T ss_dssp HHTTSEEEET-CCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEECC-CCCBTTTTTBTTTEESCH---H---HHGGG
T ss_pred HHHcCCEEEE-eeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCccc-CCCCChHHhCCceEEEEE---e---cchhh
Confidence 6677899887 68988886554 4555 55679999999999988764 44554321 3343321 1 12234
Q ss_pred hcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEE
Q 021871 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 284 (306)
Q Consensus 205 ~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~ 284 (306)
..+++++|+|+|.+++|+|..+.+.+.+|+++.+.+.+.. .+ .+.+.+++.||+++++++|+++.. +++++.
T Consensus 153 ~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~---~~----~l~~~l~~~gv~i~~~~~v~~i~~-~~~~v~ 224 (319)
T 3cty_A 153 FKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC---EN----AYVQEIKKRNIPYIMNAQVTEIVG-DGKKVT 224 (319)
T ss_dssp GBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS---CH----HHHHHHHHTTCCEECSEEEEEEEE-SSSSEE
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC---CH----HHHHHHhcCCcEEEcCCeEEEEec-CCceEE
Confidence 5678999999999999999999999999999999887643 33 345566789999999999999996 445455
Q ss_pred EEEeC---CCC--EEecCEEEEecCC
Q 021871 285 AVKLE---DGS--TIDADTVILLPYD 305 (306)
Q Consensus 285 ~v~~~---~G~--~i~~d~vv~a~g~ 305 (306)
+|.+. +|+ .+++|.||+|+|.
T Consensus 225 ~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 225 GVKYKDRTTGEEKLIETDGVFIYVGL 250 (319)
T ss_dssp EEEEEETTTCCEEEECCSEEEECCCE
T ss_pred EEEEEEcCCCceEEEecCEEEEeeCC
Confidence 66664 675 6899999999985
No 37
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.94 E-value=5.1e-27 Score=213.12 Aligned_cols=236 Identities=17% Similarity=0.290 Sum_probs=162.6
Q ss_pred CCcEEEEcCChHHHHHHHHHHH-cCCCCCcEEEecc--------CCCCCCCCCccccccc--------------------
Q 021871 51 NREFVIVGGGNAAGYAARTFVE-HGMADGRLCIVSK--------EAYAPYERPALTKGYL-------------------- 101 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~-~g~~~~~V~vie~--------~~~~~~~~~~~~~~~~-------------------- 101 (306)
++||+|||||++|+++|++|++ .|+ +|+|+|+ ....+- .....+++
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~---~V~liE~~~~~~~~~~~~~GG--~~~~~gciP~k~l~~~a~~~~~~~~~~~ 81 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGK---RVAVVDVQTSHGPPFYAALGG--TCVNVGCVPKKLMVTGAQYMDHLRESAG 81 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCC---CEEEEESCSSSBTTTBCBTTH--HHHHHSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCC---eEEEEecccccccccCCCCCC--eeecCCcchHHHHHHHHHHHHHHhHHHh
Confidence 5899999999999999999999 998 9999992 222110 00000000
Q ss_pred cCCCCCCCC-CCCcccccC------CCCCcCChhHHhhc-CeEEEeCCcEEEEeCCCCEEEcC---C-----CcEEecCc
Q 021871 102 FPLDKKPAR-LPGFHTCVG------SGGERQTPEWYKEK-GIEMIYQDPVTSIDIEKQTLITN---S-----GKLLKYGS 165 (306)
Q Consensus 102 ~~~~~~~~~-~~~~~~~~~------~~~~~~~~~~~~~~-~v~~~~~~~v~~v~~~~~~v~~~---~-----g~~~~~~~ 165 (306)
+........ ...+..+.. ......+...+++. +++++.+ .+..++. +.+.+. + +..+.||+
T Consensus 82 ~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g-~~~~i~~--~~v~v~~~~~~~~~~~~~~~~d~ 158 (495)
T 2wpf_A 82 FGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLG-WGSLESK--NVVVVRETADPKSAVKERLQADH 158 (495)
T ss_dssp TTEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEES-EEEEEET--TEEEEESSSSTTSCEEEEEEEEE
T ss_pred cCcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe-EEEEeeC--CEEEEeecCCccCCCCeEEEcCE
Confidence 000000000 000000000 00000112234566 8999877 4666653 556654 3 56799999
Q ss_pred EEEeeCCCCccCCCCCCCCCCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhC---CCcEEEEecCCcc
Q 021871 166 LIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGW---KLDTTIIFPENHL 242 (306)
Q Consensus 166 lila~G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~---~~~v~~~~~~~~~ 242 (306)
||+|||+.+.. |++++. +. ..+++.+.+....+++++|||+|.+|+|+|..+.+. +.+|+++.+.+.+
T Consensus 159 lViATGs~p~~-p~i~G~--~~------~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 229 (495)
T 2wpf_A 159 ILLATGSWPQM-PAIPGI--EH------CISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLI 229 (495)
T ss_dssp EEECCCEEECC-CCCTTG--GG------CEEHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSS
T ss_pred EEEeCCCCcCC-CCCCCc--cc------cccHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcc
Confidence 99999998874 444432 11 123344443334578999999999999999999999 9999999999998
Q ss_pred cccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 243 LQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
++. +++.+.+.+.+.++++||+++++++|++++..+++.+ .|++.+|+++++|.||+|+|.
T Consensus 230 l~~-~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-~v~~~~G~~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 230 LRG-FDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSK-HVTFESGKTLDVDVVMMAIGR 290 (495)
T ss_dssp CTT-SCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCE-EEEETTSCEEEESEEEECSCE
T ss_pred ccc-cCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceE-EEEECCCcEEEcCEEEECCCC
Confidence 876 7899999999999999999999999999986434443 688899989999999999985
No 38
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.94 E-value=2.8e-26 Score=197.74 Aligned_cols=226 Identities=21% Similarity=0.259 Sum_probs=156.2
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCccc-ccCCCCCcCChh
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHT-CVGSGGERQTPE 128 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 128 (306)
+++||+|||||++|+++|..|++.|+ +|+|+|+... + |.+.. ......++++.. ........++..
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~-g--------g~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~ 73 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQL---STLILEKGMP-G--------GQIAW-SEEVENFPGFPEPIAGMELAQRMHQ 73 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCT-T--------GGGGG-CSCBCCSTTCSSCBCHHHHHHHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCC---cEEEEeCCCC-C--------ccccc-ccccccCCCCCCCCCHHHHHHHHHH
Confidence 35799999999999999999999998 9999999832 1 01100 000011111110 000111234455
Q ss_pred HHhhcCeEEEeCCcEEEEeCC--C---CEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCC-C--CCEEEEccHHHHHHH
Q 021871 129 WYKEKGIEMIYQDPVTSIDIE--K---QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY-L--PGVHYIRDVADADAL 200 (306)
Q Consensus 129 ~~~~~~v~~~~~~~v~~v~~~--~---~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~-~--~g~~~~~~~~~~~~~ 200 (306)
.+++.+++++. .++..++.. . ..+.+.++..+.||++|+|+|..+.. |.+++.+ . +++.++. ..
T Consensus 74 ~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~-~~i~g~~~~~~~~~~~~~------~~ 145 (325)
T 2q7v_A 74 QAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRK-LGIPGEDNFWGKGVSTCA------TC 145 (325)
T ss_dssp HHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECC-CCCTTTTTTBTTTEESCH------HH
T ss_pred HHHHcCCEEEe-eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCC-CCCCChhhccCceEEEec------cC
Confidence 56778999887 589888865 3 46767777889999999999998764 4455532 1 2333221 11
Q ss_pred HHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHH-HcCCEEEcCceEEEEEeCC
Q 021871 201 ISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQ-QNGVKFVKGASIKNLEAGS 279 (306)
Q Consensus 201 ~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~i~~~~~v~~i~~~~ 279 (306)
......+++++|+|+|.+|+|+|..|.+.+.+|+++.+.+.+.. .+. +.+.+. +.||+++++++|+++..
T Consensus 146 ~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---~~~----~~~~l~~~~gv~i~~~~~v~~i~~-- 216 (325)
T 2q7v_A 146 DGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA---NKV----AQARAFANPKMKFIWDTAVEEIQG-- 216 (325)
T ss_dssp HGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS---CHH----HHHHHHTCTTEEEECSEEEEEEEE--
T ss_pred CHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc---chH----HHHHHHhcCCceEecCCceEEEcc--
Confidence 22344679999999999999999999999999999999887643 333 333444 46999999999999985
Q ss_pred CCcEEEEEeC---CCC--EEecCEEEEecCC
Q 021871 280 DGRVAAVKLE---DGS--TIDADTVILLPYD 305 (306)
Q Consensus 280 ~~~v~~v~~~---~G~--~i~~d~vv~a~g~ 305 (306)
++.+.+|.+. +|+ ++++|.||+|+|.
T Consensus 217 ~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 247 (325)
T 2q7v_A 217 ADSVSGVKLRNLKTGEVSELATDGVFIFIGH 247 (325)
T ss_dssp SSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred CCcEEEEEEEECCCCcEEEEEcCEEEEccCC
Confidence 3444466664 675 7899999999985
No 39
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.94 E-value=4.3e-25 Score=199.78 Aligned_cols=242 Identities=16% Similarity=0.195 Sum_probs=166.2
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccc------------------------cCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYL------------------------FPLD 105 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~------------------------~~~~ 105 (306)
+++||+|||||++|+++|.+|++.|+ +|+|+|+++..+-.. ...++. .+..
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~---~V~liE~~~~~GG~~--~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~ 79 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGF---KTVCIEKNETLGGTC--LNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMS 79 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEECSSSSSHHH--HHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEES
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCCCcCCcc--cccCccchHHHHHHHHHHHHhhhhhHhhCccccC
Confidence 35799999999999999999999998 999999986532100 000000 0000
Q ss_pred CCCCCCCCccccc---CCCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcCC-C-cEEecCcEEEeeCCCCccCCCC
Q 021871 106 KKPARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNS-G-KLLKYGSLIVATGCTASRFPEK 180 (306)
Q Consensus 106 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~-g-~~~~~~~lila~G~~~~~~~~~ 180 (306)
....+++.+.... .......+..++++.+++++.+. +..++.....+.+.+ + ..+.||+||+|||+.+.. |++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~-~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~-p~i 157 (474)
T 1zmd_A 80 EVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGY-GKITGKNQVTATKADGGTQVIDTKNILIATGSEVTP-FPG 157 (474)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECC-CTT
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCC-CCC
Confidence 0000000000000 00000112345667899998874 445665555666666 4 579999999999998874 445
Q ss_pred CCCCCCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHH
Q 021871 181 IGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQ 260 (306)
Q Consensus 181 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (306)
++.+.+++. ++....+....+++++|||+|.+|+|+|..+.+.+.+|+++.+.+.++++.+++.+.+.+.+.++
T Consensus 158 ~g~~~~~v~------t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~ 231 (474)
T 1zmd_A 158 ITIDEDTIV------SSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQ 231 (474)
T ss_dssp CCCCSSSEE------CHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHHHH
T ss_pred CCCCcCcEE------cHHHHhhccccCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHHHH
Confidence 553322322 23333332335789999999999999999999999999999999999884479999999999999
Q ss_pred HcCCEEEcCceEEEEEeCCCCcEEEEE-----eCCCCEEecCEEEEecCC
Q 021871 261 QNGVKFVKGASIKNLEAGSDGRVAAVK-----LEDGSTIDADTVILLPYD 305 (306)
Q Consensus 261 ~~gv~i~~~~~v~~i~~~~~~~v~~v~-----~~~G~~i~~d~vv~a~g~ 305 (306)
+.||+++++++|++++.++++.+ .++ ..+|+++++|.||+|+|.
T Consensus 232 ~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~i~~D~vv~a~G~ 280 (474)
T 1zmd_A 232 KQGFKFKLNTKVTGATKKSDGKI-DVSIEAASGGKAEVITCDVLLVCIGR 280 (474)
T ss_dssp HTTCEEECSEEEEEEEECTTSCE-EEEEEETTSCCCEEEEESEEEECSCE
T ss_pred HCCCEEEeCceEEEEEEcCCceE-EEEEEecCCCCceEEEcCEEEECcCC
Confidence 99999999999999997444423 455 356678999999999985
No 40
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.94 E-value=4.8e-25 Score=199.17 Aligned_cols=239 Identities=15% Similarity=0.186 Sum_probs=164.7
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccc-----------------------cCC-CC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYL-----------------------FPL-DK 106 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~-----------------------~~~-~~ 106 (306)
++||+|||||++|+++|++|++.|+ +|+|+|+++..+-.. ...+++ .+. ..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~---~V~lie~~~~~GG~~--~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~ 76 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGM---KTACVEKRGALGGTC--LNVGCIPSKALLHATHLYHDAHANFARYGLMGGEG 76 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSSHHH--HHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC---eEEEEeCCCCcCCcC--CCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 4799999999999999999999998 999999986542100 000000 000 00
Q ss_pred CCCCCCCccccc---CCCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcCCC--cEEecCcEEEeeCCCCccCCCCC
Q 021871 107 KPARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEKI 181 (306)
Q Consensus 107 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g--~~~~~~~lila~G~~~~~~~~~~ 181 (306)
...++..+.... .......+...+++.+++++.++.+ .++.....+.+.+| ..+.||++|+|||+.+.. |+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~-~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~-p~~~ 154 (468)
T 2qae_A 77 VTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGS-FETAHSIRVNGLDGKQEMLETKKTIIATGSEPTE-LPFL 154 (468)
T ss_dssp CEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEE-EEETTEEEEEETTSCEEEEEEEEEEECCCEEECC-BTTB
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-EeeCCEEEEEecCCceEEEEcCEEEECCCCCcCC-CCCC
Confidence 000000000000 0000011234556678998877544 46665556666677 689999999999998874 4445
Q ss_pred CCCCCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHH-H
Q 021871 182 GGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLY-Q 260 (306)
Q Consensus 182 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 260 (306)
+.+.+++. +...+.+....+++++|||+|.+|+|+|..+.+.+.+|+++.+.+.+++. +++.+.+.+.+.+ +
T Consensus 155 g~~~~~v~------t~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~ 227 (468)
T 2qae_A 155 PFDEKVVL------SSTGALALPRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT-LDEDVTNALVGALAK 227 (468)
T ss_dssp CCCSSSEE------CHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHH
T ss_pred CCCcCcee------chHHHhhcccCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc-CCHHHHHHHHHHHhh
Confidence 53333332 23333333345789999999999999999999999999999999999885 7999999999999 9
Q ss_pred HcCCEEEcCceEEEEEeCCCCcEEEEEeC--CC--CEEecCEEEEecCC
Q 021871 261 QNGVKFVKGASIKNLEAGSDGRVAAVKLE--DG--STIDADTVILLPYD 305 (306)
Q Consensus 261 ~~gv~i~~~~~v~~i~~~~~~~v~~v~~~--~G--~~i~~d~vv~a~g~ 305 (306)
++||+++++++|++++.++++ + .+.+. +| +++++|.||+|+|.
T Consensus 228 ~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~~~g~~~~i~~D~vv~a~G~ 274 (468)
T 2qae_A 228 NEKMKFMTSTKVVGGTNNGDS-V-SLEVEGKNGKRETVTCEALLVSVGR 274 (468)
T ss_dssp HTCCEEECSCEEEEEEECSSS-E-EEEEECC---EEEEEESEEEECSCE
T ss_pred cCCcEEEeCCEEEEEEEcCCe-E-EEEEEcCCCceEEEECCEEEECCCc
Confidence 999999999999999964333 3 45554 66 57999999999985
No 41
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.94 E-value=5.9e-26 Score=206.27 Aligned_cols=243 Identities=17% Similarity=0.267 Sum_probs=161.6
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCC---CCccc------------------cccccCCCCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE---RPALT------------------KGYLFPLDKK 107 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~---~~~~~------------------~~~~~~~~~~ 107 (306)
|+++||+|||||++|+++|++|+++|+ +|+|+|+++..+-. ....+ ..+-......
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~---~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~ 99 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGM---KVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANP 99 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCC
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCC---eEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCC
Confidence 456899999999999999999999998 99999987654210 00000 0000000000
Q ss_pred CCCCCCcccc---cCCCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcCCC--cEEecCcEEEeeCCCCccCCCCCC
Q 021871 108 PARLPGFHTC---VGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEKIG 182 (306)
Q Consensus 108 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g--~~~~~~~lila~G~~~~~~~~~~~ 182 (306)
..++..+... ........+...+++.+++++.+ ....++.....+...+| ..+.||+||+|||+.+. .+|+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~---~ipg 175 (491)
T 3urh_A 100 KLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQG-TGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDVA---GIPG 175 (491)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-EEEECSSSEEEEECTTSCEEEEECSEEEECCCEECC---CBTT
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCCC---CCCC
Confidence 0000000000 00000011233456678888866 44445544456666666 47999999999998753 2333
Q ss_pred CC--CCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHH
Q 021871 183 GY--LPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQ 260 (306)
Q Consensus 183 ~~--~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (306)
.. .++... .++.........+++++|||+|.+|+|+|..+.+.+.+|+++.+.+.+++. +++.+.+.+.+.++
T Consensus 176 ~~~~~~~~~~----~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~ 250 (491)
T 3urh_A 176 VEVAFDEKTI----VSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG-MDGEVAKQLQRMLT 250 (491)
T ss_dssp BCCCCCSSSE----ECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS-SCHHHHHHHHHHHH
T ss_pred cccccCCeeE----EehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc-CCHHHHHHHHHHHH
Confidence 21 222222 234444444456899999999999999999999999999999999999886 79999999999999
Q ss_pred HcCCEEEcCceEEEEEeCCCCcEEEEEeCC---C--CEEecCEEEEecCC
Q 021871 261 QNGVKFVKGASIKNLEAGSDGRVAAVKLED---G--STIDADTVILLPYD 305 (306)
Q Consensus 261 ~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~---G--~~i~~d~vv~a~g~ 305 (306)
+.||+++++++|++++..+++. .+.+.+ | +++++|.||+|+|.
T Consensus 251 ~~gV~v~~~~~v~~i~~~~~~~--~v~~~~~~~g~~~~i~~D~Vi~a~G~ 298 (491)
T 3urh_A 251 KQGIDFKLGAKVTGAVKSGDGA--KVTFEPVKGGEATTLDAEVVLIATGR 298 (491)
T ss_dssp HTTCEEECSEEEEEEEEETTEE--EEEEEETTSCCCEEEEESEEEECCCC
T ss_pred hCCCEEEECCeEEEEEEeCCEE--EEEEEecCCCceEEEEcCEEEEeeCC
Confidence 9999999999999999643333 344442 4 57999999999996
No 42
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.94 E-value=2.2e-26 Score=195.58 Aligned_cols=217 Identities=18% Similarity=0.131 Sum_probs=153.5
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
++||+|||||++||++|+.|++.|+ +|+|+|++...... +... ..++.+..........++...+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~~~~~-~~~~-----------~~~~~~~~~~~~~~~~~~~~~~ 66 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARK---NILLVDAGERRNRF-ASHS-----------HGFLGQDGKAPGEIIAEARRQI 66 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC---CEEEEECCCCGGGG-CSCC-----------CSSTTCTTCCHHHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC---CEEEEeCCCccccc-chhh-----------cCCcCCCCCCHHHHHHHHHHHH
Confidence 4799999999999999999999998 99999987532110 0000 0011110000001123344445
Q ss_pred hhc-CeEEEeCCcEEEEeCCC--CEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCCC---CCEEEEccHHHHHHHHHhh
Q 021871 131 KEK-GIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADALISSL 204 (306)
Q Consensus 131 ~~~-~v~~~~~~~v~~v~~~~--~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~ 204 (306)
.+. ++.++. .+|..++.+. +.+.+.++..+.||++|+|+|..+.. |.+++... .++... .......
T Consensus 67 ~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~-~~~~g~~~~~~~~~~~~------~~~~~~~ 138 (297)
T 3fbs_A 67 ERYPTIHWVE-GRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDEL-PEIAGLRERWGSAVFHC------PYCHGYE 138 (297)
T ss_dssp TTCTTEEEEE-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEEC-CCCBTTGGGBTTTEESC------HHHHTGG
T ss_pred HhcCCeEEEE-eEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCCC-CCCCCchhhcCCeeEEc------ccCcchh
Confidence 555 677764 4899998764 47788888889999999999998763 55555321 222221 1122233
Q ss_pred hcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEE
Q 021871 205 EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVA 284 (306)
Q Consensus 205 ~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~ 284 (306)
..+++++|+|+|.+++|+|..|.+.+ +|+++.+.+.. +. +.+.+.+++.||+++. ++|++++. ++
T Consensus 139 ~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~----~~----~~~~~~l~~~gv~i~~-~~v~~i~~--~~--- 203 (297)
T 3fbs_A 139 LDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVE----PD----ADQHALLAARGVRVET-TRIREIAG--HA--- 203 (297)
T ss_dssp GTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCC----CC----HHHHHHHHHTTCEEEC-SCEEEEET--TE---
T ss_pred hcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCC----CC----HHHHHHHHHCCcEEEc-ceeeeeec--CC---
Confidence 45899999999999999999999998 99999988652 22 3466788899999996 89999984 33
Q ss_pred EEEeCCCCEEecCEEEEecCC
Q 021871 285 AVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 285 ~v~~~~G~~i~~d~vv~a~g~ 305 (306)
.|.+.+|+++++|.||+|+|.
T Consensus 204 ~v~~~~g~~~~~D~vi~a~G~ 224 (297)
T 3fbs_A 204 DVVLADGRSIALAGLFTQPKL 224 (297)
T ss_dssp EEEETTSCEEEESEEEECCEE
T ss_pred eEEeCCCCEEEEEEEEEccCc
Confidence 588899999999999999985
No 43
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.94 E-value=1e-26 Score=210.94 Aligned_cols=236 Identities=18% Similarity=0.259 Sum_probs=163.1
Q ss_pred CCcEEEEcCChHHHHHHHHHHH-cCCCCCcEEEecc--------CCCCCCCCCccccccc--------------------
Q 021871 51 NREFVIVGGGNAAGYAARTFVE-HGMADGRLCIVSK--------EAYAPYERPALTKGYL-------------------- 101 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~-~g~~~~~V~vie~--------~~~~~~~~~~~~~~~~-------------------- 101 (306)
++||+|||||++|+++|++|++ .|+ +|+|+|+ ....+- .....|++
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~---~V~liE~~~~~~~~~~~~~GG--~c~~~gciPsk~l~~~a~~~~~~~~~~~ 77 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKK---RVAVIDLQKHHGPPHYAALGG--TCVNVGCVPKKLMVTGANYMDTIRESAG 77 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCC---CEEEEESCSSSBTTTBSCTTC--HHHHHSHHHHHHHHHHHHHHHHHHHGGG
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCC---EEEEEecccccccccCCCcCc--cccCCCcchhhHHHHHHHHHHHHHHHHh
Confidence 5799999999999999999999 998 9999992 222110 00000110
Q ss_pred cCCCC--C--CCCCCCcccccC---CCCCcCChhHHhhc-CeEEEeCCcEEEEeCCCCEEEc-----CCC---cEEecCc
Q 021871 102 FPLDK--K--PARLPGFHTCVG---SGGERQTPEWYKEK-GIEMIYQDPVTSIDIEKQTLIT-----NSG---KLLKYGS 165 (306)
Q Consensus 102 ~~~~~--~--~~~~~~~~~~~~---~~~~~~~~~~~~~~-~v~~~~~~~v~~v~~~~~~v~~-----~~g---~~~~~~~ 165 (306)
+.... . ..++..+..... ......+...+++. +++++.+ .+..++.. .+.+ .++ ..+.||+
T Consensus 78 ~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g-~~~~i~~~--~v~v~~~~~~~g~~~~~~~~d~ 154 (490)
T 1fec_A 78 FGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQG-FGALQDNH--TVLVRESADPNSAVLETLDTEY 154 (490)
T ss_dssp GTEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEES-EEEEEETT--EEEEESSSSTTSCEEEEEEEEE
T ss_pred cCcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEe-EEEEeeCC--EEEEEeeccCCCCceEEEEcCE
Confidence 00000 0 000000000000 00001122334567 9999877 46667653 4444 256 6899999
Q ss_pred EEEeeCCCCccCCCCCCCCCCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhC---CCcEEEEecCCcc
Q 021871 166 LIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGW---KLDTTIIFPENHL 242 (306)
Q Consensus 166 lila~G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~---~~~v~~~~~~~~~ 242 (306)
||+|||+.+.. |++++. +. ..+++.+......+++++|||+|.+|+|+|..+.+. +.+|+++.+.+.+
T Consensus 155 lviAtGs~p~~-p~i~g~--~~------~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 225 (490)
T 1fec_A 155 ILLATGSWPQH-LGIEGD--DL------CITSNEAFYLDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMI 225 (490)
T ss_dssp EEECCCEEECC-CCSBTG--GG------CBCHHHHTTCSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred EEEeCCCCCCC-CCCCCc--cc------eecHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCc
Confidence 99999998874 444432 11 223444444334578999999999999999999999 9999999999998
Q ss_pred cccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 243 LQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
++. +++.+.+.+.+.++++||+++++++|++++.++++.+ .|++.+|+++++|.||+|+|.
T Consensus 226 l~~-~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~-~v~~~~G~~i~~D~vv~a~G~ 286 (490)
T 1fec_A 226 LRG-FDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTR-HVVFESGAEADYDVVMLAIGR 286 (490)
T ss_dssp STT-SCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCE-EEEETTSCEEEESEEEECSCE
T ss_pred ccc-cCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEE-EEEECCCcEEEcCEEEEccCC
Confidence 885 7899999999999999999999999999996444444 688899989999999999985
No 44
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.94 E-value=2.9e-26 Score=206.99 Aligned_cols=250 Identities=16% Similarity=0.124 Sum_probs=153.5
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcC-----CCCCcEEEeccCCCCCCCCCccccccccCCC--------CCCCCCCCccc
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHG-----MADGRLCIVSKEAYAPYERPALTKGYLFPLD--------KKPARLPGFHT 116 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g-----~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 116 (306)
..+||+|||||++||++|..|++.| . +|+|+|+.+..+|.......+...... ..+.....|..
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~---~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~ 105 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGAL---EVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVN 105 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCC---CEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcc---cEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhH
Confidence 3579999999999999999999999 6 999999998876543222111111000 00000000000
Q ss_pred c-c-----------------CCCCCcCChhHHhhcCeEEEeCCcEEEEeCC---CC----EEEcCCCc----EEecCcEE
Q 021871 117 C-V-----------------GSGGERQTPEWYKEKGIEMIYQDPVTSIDIE---KQ----TLITNSGK----LLKYGSLI 167 (306)
Q Consensus 117 ~-~-----------------~~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~---~~----~v~~~~g~----~~~~~~li 167 (306)
. . ......++....+++++.++++++|.+++.. .. .+.+.++. .+.||+||
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lV 185 (463)
T 3s5w_A 106 YLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALV 185 (463)
T ss_dssp HHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEE
T ss_pred hhhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEE
Confidence 0 0 0000012223334567788889899999875 33 56665654 79999999
Q ss_pred EeeCCCCccCCC-CCCCCCC-CEEEEccHHH-HHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhC--CCcEEEEecCCcc
Q 021871 168 VATGCTASRFPE-KIGGYLP-GVHYIRDVAD-ADALISSLEKAKKVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHL 242 (306)
Q Consensus 168 la~G~~~~~~~~-~~~~~~~-g~~~~~~~~~-~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~--~~~v~~~~~~~~~ 242 (306)
+|+|..+.. |. +++.... .+.+.....+ ...+......+++|+|||+|.+|+|+|..|.+. +.+|+++.|.+.+
T Consensus 186 lAtG~~p~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 186 VSPGGTPRI-PQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp ECCCCEECC-CGGGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred ECCCCCCCC-cchhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 999997663 43 2221111 2333322222 111111112578999999999999999999998 8899999999876
Q ss_pred cccc--------c-----------CHHHHHHHHHHHHH--------------------------cCCEEEcCceEEEEEe
Q 021871 243 LQRL--------F-----------TPSLAQRYEQLYQQ--------------------------NGVKFVKGASIKNLEA 277 (306)
Q Consensus 243 ~~~~--------~-----------~~~~~~~~~~~~~~--------------------------~gv~i~~~~~v~~i~~ 277 (306)
.+.. + ++.....+.+.+.. .||+++.++.|++++.
T Consensus 265 ~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~ 344 (463)
T 3s5w_A 265 KPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATA 344 (463)
T ss_dssp CBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEE
T ss_pred cCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEe
Confidence 5421 1 11111222222111 5999999999999986
Q ss_pred CCCCcEEEEEeC---CCCE--EecCEEEEecCC
Q 021871 278 GSDGRVAAVKLE---DGST--IDADTVILLPYD 305 (306)
Q Consensus 278 ~~~~~v~~v~~~---~G~~--i~~d~vv~a~g~ 305 (306)
. ++.+ .|.+. +|+. +++|.||+|||.
T Consensus 345 ~-~~~~-~v~~~~~~~g~~~~~~~D~Vv~AtG~ 375 (463)
T 3s5w_A 345 T-AQGI-ELALRDAGSGELSVETYDAVILATGY 375 (463)
T ss_dssp E-TTEE-EEEEEETTTCCEEEEEESEEEECCCE
T ss_pred c-CCEE-EEEEEEcCCCCeEEEECCEEEEeeCC
Confidence 4 3443 46655 6754 999999999995
No 45
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.94 E-value=3.3e-26 Score=209.21 Aligned_cols=183 Identities=16% Similarity=0.142 Sum_probs=120.6
Q ss_pred CCcEEEEcCChHHHHHHHHHH-HcCCCCCcEEEeccCCCCCC-----CCCcc---ccccccCCCCC-----CCCCCCccc
Q 021871 51 NREFVIVGGGNAAGYAARTFV-EHGMADGRLCIVSKEAYAPY-----ERPAL---TKGYLFPLDKK-----PARLPGFHT 116 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~-~~g~~~~~V~vie~~~~~~~-----~~~~~---~~~~~~~~~~~-----~~~~~~~~~ 116 (306)
.+||+|||||++|+++|+.|+ +.|+ +|+|+|+++..+- ..+.. .....+..... ...+... .
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~---~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~-~ 83 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGL---TTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTT-Y 83 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---CEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBS-E
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCC---CEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCccc-C
Confidence 479999999999999999999 8887 9999999865430 11111 00001100000 0000000 0
Q ss_pred ccCCCCCcCChhHHhhcCe--EEEeCCcEEEEeCCCC----EEEcCCCcEEecCcEEEeeCC--CCccCCCCCCCC-CCC
Q 021871 117 CVGSGGERQTPEWYKEKGI--EMIYQDPVTSIDIEKQ----TLITNSGKLLKYGSLIVATGC--TASRFPEKIGGY-LPG 187 (306)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~v--~~~~~~~v~~v~~~~~----~v~~~~g~~~~~~~lila~G~--~~~~~~~~~~~~-~~g 187 (306)
....+...++...+++.++ +++++++|.+++.+.. .+.+++|..+.||+||+|+|. .+. .|.++|.+ ..+
T Consensus 84 ~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~-~p~ipG~~~f~g 162 (540)
T 3gwf_A 84 ITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAIN-FPNLPGLDTFEG 162 (540)
T ss_dssp EEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBC-CCCCTTGGGCCS
T ss_pred CCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCC-CCCCCCccccCC
Confidence 0001112344555667787 7888999999987554 788888888999999999995 555 45555532 334
Q ss_pred EEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcc
Q 021871 188 VHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (306)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~ 242 (306)
.......+ .......+++|+|||+|.+|+|+|..|++.+.+|++++|.+.+
T Consensus 163 ~~~~~~~~----~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 213 (540)
T 3gwf_A 163 ETIHTAAW----PEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQY 213 (540)
T ss_dssp EEEEGGGC----CSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCC
T ss_pred CEEEeecC----CCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 32221111 1112245899999999999999999999999999999999884
No 46
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.94 E-value=2.4e-25 Score=197.85 Aligned_cols=226 Identities=22% Similarity=0.233 Sum_probs=164.4
Q ss_pred CcEEEEcCChHHHHHHHHHHH---cCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChh
Q 021871 52 REFVIVGGGNAAGYAARTFVE---HGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~---~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (306)
+||+|||||++||++|.+|++ .|+ +|+|+|+++...+.. .... ....... ..+....+..
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~---~V~vie~~~~~~~~~-~~~~--~~~~~~~-----------~~~~~~~~~~ 64 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKA---DVKVINKSRFSYFRP-ALPH--VAIGVRD-----------VDELKVDLSE 64 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGS---EEEEEESSSEEEECC-SSCC--CCSSCCC-----------CCCEEEEHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCC---eEEEEeCCCCceecc-chhh--cccCCcC-----------HHHHHHHHHH
Confidence 689999999999999999999 777 999999998654331 1110 0000000 0111345666
Q ss_pred HHhhcCeEEEeCCcEEEEeCCCCEEEcCCCcE----EecCcEEEeeCCCCccCCCCCCCCCCCEEEEccHHHHHHHHHhh
Q 021871 129 WYKEKGIEMIYQDPVTSIDIEKQTLITNSGKL----LKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL 204 (306)
Q Consensus 129 ~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~----~~~~~lila~G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 204 (306)
.+++.+++++.+ +|..++.+.+.+.+.++.. +.||+||+|+|..+.. |.+++... ....+....+...+.+.+
T Consensus 65 ~~~~~gv~~~~~-~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~-~~ipG~~~-~~~~~~~~~~~~~~~~~l 141 (409)
T 3h8l_A 65 ALPEKGIQFQEG-TVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLAT-ELVKGWDK-YGYSVCEPEFATKLREKL 141 (409)
T ss_dssp HTGGGTCEEEEC-EEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEECG-GGSBTHHH-HCEESSSTTHHHHHHHHH
T ss_pred HHhhCCeEEEEe-eEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcCc-cCCCChhh-cCcCcCCHHHHHHHHHHH
Confidence 777889999877 9999999888888877653 9999999999998764 44443211 223344455555555544
Q ss_pred hc-CCeEEEEcCCH-------------------------HHHHHHH----HHHhCC----CcEEEEecCCcccccccCHH
Q 021871 205 EK-AKKVVVVGGGY-------------------------IGMEVAA----AAVGWK----LDTTIIFPENHLLQRLFTPS 250 (306)
Q Consensus 205 ~~-~~~v~viG~g~-------------------------~a~e~a~----~l~~~~----~~v~~~~~~~~~~~~~~~~~ 250 (306)
.. .++++|||+|. .++|+|. .+.+.+ .+|+++.+.+ .++. +++.
T Consensus 142 ~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~-~l~~-~~~~ 219 (409)
T 3h8l_A 142 ESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE-YLSD-LSPN 219 (409)
T ss_dssp HHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSS-SSTT-BCHH
T ss_pred HHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCc-cccc-cCHH
Confidence 43 25677999991 3566664 455666 3899999988 5554 6889
Q ss_pred HHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 251 LAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 251 ~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+.+.+.+.++++||+++++++|++++. + +|.+++|+++++|.+|+|+|.
T Consensus 220 ~~~~~~~~l~~~gV~~~~~~~v~~i~~--~----~v~~~~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 220 SRKAVASIYNQLGIKLVHNFKIKEIRE--H----EIVDEKGNTIPADITILLPPY 268 (409)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEECS--S----EEEETTSCEEECSEEEEECCE
T ss_pred HHHHHHHHHHHCCCEEEcCCceEEECC--C----eEEECCCCEEeeeEEEECCCC
Confidence 999999999999999999999999984 2 477889999999999999985
No 47
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.94 E-value=4.6e-25 Score=200.76 Aligned_cols=240 Identities=16% Similarity=0.189 Sum_probs=167.7
Q ss_pred CCcEEEEcCChHHHHHHHHHHHc---CCCCCcEEEeccCCCCCCC---CCccccccccC--------CCCCCCCCC----
Q 021871 51 NREFVIVGGGNAAGYAARTFVEH---GMADGRLCIVSKEAYAPYE---RPALTKGYLFP--------LDKKPARLP---- 112 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~---g~~~~~V~vie~~~~~~~~---~~~~~~~~~~~--------~~~~~~~~~---- 112 (306)
++||+|||||++|+++|++|+++ |+ +|+|+|+++ .+-. ....+...+.. .......++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~---~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~ 77 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETT---QVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFD 77 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTE---EEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC----
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcC---EEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccC
Confidence 47999999999999999999999 87 999999986 2200 00000000000 000000000
Q ss_pred ----CcccccC------CCCCcCChhHHhhcCeEEEeCCcEEEEeC------CCCEEEcCCCc--EEecCcEEEeeCCCC
Q 021871 113 ----GFHTCVG------SGGERQTPEWYKEKGIEMIYQDPVTSIDI------EKQTLITNSGK--LLKYGSLIVATGCTA 174 (306)
Q Consensus 113 ----~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~v~~v~~------~~~~v~~~~g~--~~~~~~lila~G~~~ 174 (306)
.+..... ......+..++++.+++++.+ .+..++. ....+..+++. .+.||++|+|||+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p 156 (499)
T 1xdi_A 78 DAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAG-RGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASP 156 (499)
T ss_dssp --CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-EEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCC
Confidence 0000000 000011345566789999887 4666776 22345556665 799999999999988
Q ss_pred ccCCCCCCCCCCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHH
Q 021871 175 SRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQR 254 (306)
Q Consensus 175 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 254 (306)
.. |++++.+..++....+. .+....+++++|||+|.+|+|+|..+...+.+|+++.+.+.+++. +++.+.+.
T Consensus 157 ~~-p~i~g~~~~~v~~~~~~------~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~ 228 (499)
T 1xdi_A 157 RI-LPSAQPDGERILTWRQL------YDLDALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY-EDADAALV 228 (499)
T ss_dssp CC-CGGGCCCSSSEEEGGGG------GGCSSCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC-SSHHHHHH
T ss_pred CC-CCCCCCCcCcEEehhHh------hhhhccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHHHHH
Confidence 74 55565444444332222 222235789999999999999999999999999999999999886 79999999
Q ss_pred HHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 255 YEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 255 ~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+.+.+++.||+++++++|++++.+ ++.+ .|++.+|+++++|.||+|+|.
T Consensus 229 l~~~l~~~GV~i~~~~~V~~i~~~-~~~v-~v~~~~g~~i~aD~Vv~a~G~ 277 (499)
T 1xdi_A 229 LEESFAERGVRLFKNARAASVTRT-GAGV-LVTMTDGRTVEGSHALMTIGS 277 (499)
T ss_dssp HHHHHHHTTCEEETTCCEEEEEEC-SSSE-EEEETTSCEEEESEEEECCCE
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEe-CCEE-EEEECCCcEEEcCEEEECCCC
Confidence 999999999999999999999963 4444 577888889999999999985
No 48
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.94 E-value=1.4e-25 Score=203.18 Aligned_cols=240 Identities=16% Similarity=0.233 Sum_probs=164.5
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccc----------------------------
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYL---------------------------- 101 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~---------------------------- 101 (306)
+.+||+|||||++|+++|++|++.|+ +|+|+|+++..+-. ...+|.+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~---~V~liEk~~~~gG~--~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~ 76 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGL---KTALIEKYKGKEGK--TALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLH 76 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTC---CEEEEECCBCTTSS--BCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCC---EEEEEeCCCccCCC--CCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45899999999999999999999998 99999998632100 0000000
Q ss_pred -cCCCCCCCCCCCccccc---CCCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcCCC--cEEecCcEEEeeCCCCc
Q 021871 102 -FPLDKKPARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTAS 175 (306)
Q Consensus 102 -~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g--~~~~~~~lila~G~~~~ 175 (306)
........+++...... .......+...+++.+++++.+ .+..++.....+...++ ..+.||++|+|||+.+.
T Consensus 77 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~ 155 (476)
T 3lad_A 77 GISTGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEG-HGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPV 155 (476)
T ss_dssp TEECSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEES-EEEECSTTCEEEECTTSCEEEECCSCEEECCCEEEC
T ss_pred CcccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCC
Confidence 00000000000000000 0000011223455678998876 44445655556776676 47999999999999877
Q ss_pred cCCCCCCCCCCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHH
Q 021871 176 RFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRY 255 (306)
Q Consensus 176 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 255 (306)
.+| .++.+.+.+. ++..+.+....+++++|||+|.+++|+|..+...+.+|+++.+.+.+++. +++.+.+.+
T Consensus 156 ~~~-~~~~~~~~v~------~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l 227 (476)
T 3lad_A 156 EIP-PAPVDQDVIV------DSTGALDFQNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA-VDEQVAKEA 227 (476)
T ss_dssp CCT-TSCCCSSSEE------EHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-SCHHHHHHH
T ss_pred CCC-CCCCCcccEE------echhhhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc-cCHHHHHHH
Confidence 443 2222223332 23333333446789999999999999999999999999999999999885 799999999
Q ss_pred HHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCC---CEEecCEEEEecCC
Q 021871 256 EQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG---STIDADTVILLPYD 305 (306)
Q Consensus 256 ~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G---~~i~~d~vv~a~g~ 305 (306)
.+.++++||++++++.|++++.+ ++.+ .+.+.++ +++++|.||+|+|.
T Consensus 228 ~~~l~~~Gv~v~~~~~v~~i~~~-~~~~-~v~~~~~~g~~~~~~D~vi~a~G~ 278 (476)
T 3lad_A 228 QKILTKQGLKILLGARVTGTEVK-NKQV-TVKFVDAEGEKSQAFDKLIVAVGR 278 (476)
T ss_dssp HHHHHHTTEEEEETCEEEEEEEC-SSCE-EEEEESSSEEEEEEESEEEECSCE
T ss_pred HHHHHhCCCEEEECCEEEEEEEc-CCEE-EEEEEeCCCcEEEECCEEEEeeCC
Confidence 99999999999999999999974 4333 3555544 57999999999985
No 49
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.93 E-value=1e-25 Score=192.99 Aligned_cols=226 Identities=17% Similarity=0.194 Sum_probs=155.5
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCccc-ccCCCCCcCChhHH
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHT-CVGSGGERQTPEWY 130 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 130 (306)
+||+|||||++|+++|..|++.|+. +|+|+|++...+ .+... .....++++.. ........++...+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~--~v~lie~~~~gg---------~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~ 69 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVK--NAVLFEKGMPGG---------QITGS-SEIENYPGVKEVVSGLDFMQPWQEQC 69 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCS--SEEEECSSSTTC---------GGGGC-SCBCCSTTCCSCBCHHHHHHHHHHHH
T ss_pred ceEEEECccHHHHHHHHHHHHCCCC--cEEEEcCCCCCc---------ccccc-cccccCCCCcccCCHHHHHHHHHHHH
Confidence 6999999999999999999999863 799999963211 11000 00011121111 00011123344556
Q ss_pred hhcCeEEEeCCcEEEEeCCCC--EEEcCCCcEEecCcEEEeeCCCCccCCCCCCCC---CCCEEEEccHHHHHHHHHhhh
Q 021871 131 KEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADALISSLE 205 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~~--~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~ 205 (306)
.+.+++++. .+|..++.+.. .+.+.++..+.||++|+|+|..+.. |.+++.. .+++.++. .......
T Consensus 70 ~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~-~~~~g~~~~~~~~~~~~~------~~~~~~~ 141 (311)
T 2q0l_A 70 FRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKR-TGIKGESEYWGKGVSTCA------TCDGFFY 141 (311)
T ss_dssp HTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEECC-CCCBTHHHHBTTTEESCH------HHHGGGG
T ss_pred HHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCC-CCCCChhhccCCcEEEee------cCChhhc
Confidence 677899887 68999887655 6667778889999999999988763 4444421 12333221 1222345
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHH-HcCCEEEcCceEEEEEeCCCCcEE
Q 021871 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQ-QNGVKFVKGASIKNLEAGSDGRVA 284 (306)
Q Consensus 206 ~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gv~i~~~~~v~~i~~~~~~~v~ 284 (306)
.+++++|+|+|.+++|+|..+.+.+.+|+++.+.+.+.. ++. +.+.+. +.||++++++.|+++.. +++.+.
T Consensus 142 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---~~~----~~~~l~~~~gv~v~~~~~v~~i~~-~~~~v~ 213 (311)
T 2q0l_A 142 KNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRC---API----TLEHAKNNDKIEFLTPYVVEEIKG-DASGVS 213 (311)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCCS---CHH----HHHHHHTCTTEEEETTEEEEEEEE-ETTEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccCC---CHH----HHHHHhhCCCeEEEeCCEEEEEEC-CCCcEe
Confidence 679999999999999999999999999999999887632 433 344454 47999999999999986 334444
Q ss_pred EEEeC---CCC--EEecCEEEEecCC
Q 021871 285 AVKLE---DGS--TIDADTVILLPYD 305 (306)
Q Consensus 285 ~v~~~---~G~--~i~~d~vv~a~g~ 305 (306)
+|.+. +|+ ++++|.||+|+|.
T Consensus 214 ~v~~~~~~~g~~~~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 214 SLSIKNTATNEKRELVVPGFFIFVGY 239 (311)
T ss_dssp EEEEEETTTCCEEEEECSEEEECSCE
T ss_pred EEEEEecCCCceEEEecCEEEEEecC
Confidence 56665 675 6899999999985
No 50
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.93 E-value=5.7e-26 Score=196.63 Aligned_cols=228 Identities=17% Similarity=0.268 Sum_probs=154.3
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccc-cCCCCCcCCh
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTC-VGSGGERQTP 127 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 127 (306)
++.+||+|||||++|+++|+.|++.|+ +|+|+|+....+ .+.. ......+|++... .......++.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~---~v~lie~~~~gg---------~~~~-~~~~~~~~~~~~~~~~~~~~~~l~ 78 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQL---APLVFEGTSFGG---------ALMT-TTDVENYPGFRNGITGPELMDEMR 78 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTC---CCEEECCSSCSC---------GGGS-CSCBCCSTTCTTCBCHHHHHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCC---eEEEEecCCCCC---------ceec-cchhhhcCCCCCCCCHHHHHHHHH
Confidence 456899999999999999999999998 999999752211 1100 0001112222110 0011123445
Q ss_pred hHHhhcCeEEEeCCcEEEEeCC-CCEE-EcCCCcEEecCcEEEeeCCCCccCCCCCCCC---CCCEEEEccHHHHHHHHH
Q 021871 128 EWYKEKGIEMIYQDPVTSIDIE-KQTL-ITNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADALIS 202 (306)
Q Consensus 128 ~~~~~~~v~~~~~~~v~~v~~~-~~~v-~~~~g~~~~~~~lila~G~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~ 202 (306)
..+.+.+++++.+. +..++.. ...+ .+.++..+.||+||+|+|..+.. |.+++.. .+++..+ .....
T Consensus 79 ~~~~~~~v~~~~~~-v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~~-~~i~g~~~~~~~~~~~~------~~~~~ 150 (335)
T 2a87_A 79 EQALRFGADLRMED-VESVSLHGPLKSVVTADGQTHRARAVILAMGAAARY-LQVPGEQELLGRGVSSC------ATCDG 150 (335)
T ss_dssp HHHHHTTCEEECCC-EEEEECSSSSEEEEETTSCEEEEEEEEECCCEEECC-CCCTHHHHTBTTTEESC------HHHHG
T ss_pred HHHHHcCCEEEEee-EEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCccC-CCCCchHhccCCceEEe------eccch
Confidence 55677899998875 8888873 3467 77778889999999999998764 4444321 1222221 12223
Q ss_pred hhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCc
Q 021871 203 SLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGR 282 (306)
Q Consensus 203 ~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~ 282 (306)
....+++++|||+|.+|+|+|..+.+.+.+|+++.+.+.+.. ...+ ..+.+++.||++++++.|++++.+ + .
T Consensus 151 ~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~---~~~~---~~~~~~~~gV~v~~~~~v~~i~~~-~-~ 222 (335)
T 2a87_A 151 FFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA---SKIM---LDRARNNDKIRFLTNHTVVAVDGD-T-T 222 (335)
T ss_dssp GGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS---CTTH---HHHHHHCTTEEEECSEEEEEEECS-S-S
T ss_pred hhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc---cHHH---HHHHhccCCcEEEeCceeEEEecC-C-c
Confidence 345689999999999999999999999999999999887643 2111 123456789999999999999953 3 3
Q ss_pred EEEEEeC---CC--CEEecCEEEEecCC
Q 021871 283 VAAVKLE---DG--STIDADTVILLPYD 305 (306)
Q Consensus 283 v~~v~~~---~G--~~i~~d~vv~a~g~ 305 (306)
+.+|.+. +| +.+++|.||+|+|.
T Consensus 223 ~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2a87_A 223 VTGLRVRDTNTGAETTLPVTGVFVAIGH 250 (335)
T ss_dssp CCEEEEEEETTSCCEEECCSCEEECSCE
T ss_pred EeEEEEEEcCCCceEEeecCEEEEccCC
Confidence 3244443 45 47999999999985
No 51
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.93 E-value=4.8e-26 Score=205.49 Aligned_cols=240 Identities=20% Similarity=0.260 Sum_probs=161.4
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCC--CCCccccc-ccc-----CC---CCCCCCCC-----Cc
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY--ERPALTKG-YLF-----PL---DKKPARLP-----GF 114 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~--~~~~~~~~-~~~-----~~---~~~~~~~~-----~~ 114 (306)
++||+|||||++|+++|..|++.|+ +|+|+|++...+. .....+.. ++. .. ......++ .+
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~---~V~liE~~~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~ 79 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGL---STAIVEPKYWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDY 79 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCH
Confidence 4799999999999999999999998 9999999732100 00000000 000 00 00000000 00
Q ss_pred ccccC------CCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcCCC--cEEecCcEEEeeCCCCccCCCCCCCCCC
Q 021871 115 HTCVG------SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEKIGGYLP 186 (306)
Q Consensus 115 ~~~~~------~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g--~~~~~~~lila~G~~~~~~~~~~~~~~~ 186 (306)
..... ......+...+++.+++++.++.+. ++.+...+.+.+| ..+.||++|+|+|+.+.. |+.++.+..
T Consensus 80 ~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~-id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~-~~~~g~~~~ 157 (464)
T 2a8x_A 80 GIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF-ADANTLLVDLNDGGTESVTFDNAIIATGSSTRL-VPGTSLSAN 157 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE-SSSSEEEEEETTSCCEEEEEEEEEECCCEEECC-CTTCCCBTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-ecCCeEEEEeCCCceEEEEcCEEEECCCCCCCC-CCCCCCCce
Confidence 00000 0000112345666789998775443 4433345666667 689999999999998864 444442211
Q ss_pred CEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEE
Q 021871 187 GVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKF 266 (306)
Q Consensus 187 g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i 266 (306)
+ + +..........+++++|||+|.+|+|+|..+.+.+.+|+++.+.+.+++. +++.+.+.+.+.++++||++
T Consensus 158 -~--~----~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~gv~i 229 (464)
T 2a8x_A 158 -V--V----TYEEQILSRELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN-EDADVSKEIEKQFKKLGVTI 229 (464)
T ss_dssp -E--E----CHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHHTCEE
T ss_pred -E--E----ecHHHhhccccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHHHHHHHHHHHHcCCEE
Confidence 1 1 23333332335789999999999999999999999999999999999885 79999999999999999999
Q ss_pred EcCceEEEEEeCCCCcEEEEEeC-CC--CEEecCEEEEecCC
Q 021871 267 VKGASIKNLEAGSDGRVAAVKLE-DG--STIDADTVILLPYD 305 (306)
Q Consensus 267 ~~~~~v~~i~~~~~~~v~~v~~~-~G--~~i~~d~vv~a~g~ 305 (306)
++++.|++++.+ ++.+ .+.+. +| +++++|.||+|+|.
T Consensus 230 ~~~~~v~~i~~~-~~~~-~v~~~~~g~~~~~~~D~vv~a~G~ 269 (464)
T 2a8x_A 230 LTATKVESIADG-GSQV-TVTVTKDGVAQELKAEKVLQAIGF 269 (464)
T ss_dssp ECSCEEEEEEEC-SSCE-EEEEESSSCEEEEEESEEEECSCE
T ss_pred EeCcEEEEEEEc-CCeE-EEEEEcCCceEEEEcCEEEECCCC
Confidence 999999999963 3333 45554 56 57999999999985
No 52
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.93 E-value=9.9e-26 Score=203.45 Aligned_cols=236 Identities=18% Similarity=0.210 Sum_probs=165.4
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccc-----------------cCCCCCCCCCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYL-----------------FPLDKKPARLPG 113 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~ 113 (306)
.+||+|||||++|+++|++|++.|+ +|+|+|+++..+-.. ...+++ ........+++.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~---~V~liEk~~~~GG~~--~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~ 78 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKY---NVLMADPKGELGGNC--LYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFST 78 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECTTSSSSHHH--HHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCC---eEEEEECCCCCCCcc--cccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHH
Confidence 4799999999999999999999998 999999776543100 000010 000011111111
Q ss_pred cccccCC--CCC--cCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcCCCcE--EecCcEEEeeCCCCccCCCCCCCCCCC
Q 021871 114 FHTCVGS--GGE--RQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKL--LKYGSLIVATGCTASRFPEKIGGYLPG 187 (306)
Q Consensus 114 ~~~~~~~--~~~--~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~--~~~~~lila~G~~~~~~~~~~~~~~~g 187 (306)
+...... ... ..+...+++.+++++.+ ++..++.....+...++.. +.||++|+|||+.+.. |++++
T Consensus 79 ~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~-p~i~G----- 151 (466)
T 3l8k_A 79 VQDRKDYVQELRFKQHKRNMSQYETLTFYKG-YVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETAK-LRLPG----- 151 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECC-CCCTT-----
T ss_pred HHHHHHhheeccccchHHHHHHhCCCEEEEe-EEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCccC-CCCCC-----
Confidence 0000000 000 12233445578998876 7888887767788888877 9999999999998774 44444
Q ss_pred EEEEccHHHHHHHH----HhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcC
Q 021871 188 VHYIRDVADADALI----SSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNG 263 (306)
Q Consensus 188 ~~~~~~~~~~~~~~----~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 263 (306)
.. .+.+.+.+. .....+++++|||+|.+|+|+|..+.+.+.+|+++.+.+++++..+++.+.+.+.+.++
T Consensus 152 ~~---~~~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~--- 225 (466)
T 3l8k_A 152 VE---YCLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTLLSILK--- 225 (466)
T ss_dssp GG---GSBCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCCHHHHHHHHHHHC---
T ss_pred cc---ceEeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCCCCHHHHHHHHhcCE---
Confidence 22 123344444 22235789999999999999999999999999999999999987448888888888776
Q ss_pred CEEEcCceEEEEEeCCCCcEEEEEeC--CCC--EEecCEEEEecCC
Q 021871 264 VKFVKGASIKNLEAGSDGRVAAVKLE--DGS--TIDADTVILLPYD 305 (306)
Q Consensus 264 v~i~~~~~v~~i~~~~~~~v~~v~~~--~G~--~i~~d~vv~a~g~ 305 (306)
|+++.++.|++++..+++.+ .+.+. +|+ ++++|.||+|+|.
T Consensus 226 v~i~~~~~v~~i~~~~~~~v-~v~~~~~~G~~~~i~~D~vi~a~G~ 270 (466)
T 3l8k_A 226 LNIKFNSPVTEVKKIKDDEY-EVIYSTKDGSKKSIFTNSVVLAAGR 270 (466)
T ss_dssp CCEECSCCEEEEEEEETTEE-EEEECCTTSCCEEEEESCEEECCCE
T ss_pred EEEEECCEEEEEEEcCCCcE-EEEEEecCCceEEEEcCEEEECcCC
Confidence 99999999999986431444 47776 676 7999999999985
No 53
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.93 E-value=2e-25 Score=191.31 Aligned_cols=230 Identities=20% Similarity=0.241 Sum_probs=154.9
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
..|||+|||||||||+||.+|+++|+ +|+|+|+...-+ ...+.+++ .++|++......+........
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~---~V~liE~~~~gG---~~~~~~~i-------~~~p~~~~~~~~~~~~~~~~~ 71 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANL---KTVMIERGIPGG---QMANTEEV-------ENFPGFEMITGPDLSTKMFEH 71 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCTTG---GGGGCSCB-------CCSTTCSSBCHHHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCC---CEEEEecCCCCC---eeeccccc-------CCcCCccccchHHHHHHHHHH
Confidence 45899999999999999999999998 999999864311 00011111 223333222211222233444
Q ss_pred HhhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCCC---CCEEEEccHHHHHHHHHhhhc
Q 021871 130 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL---PGVHYIRDVADADALISSLEK 206 (306)
Q Consensus 130 ~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~ 206 (306)
..+....+.....+...+.........++..+.||++|+|||+.+.. |++|+.+. .++.++ .........
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~~-~~ipG~~~~~~~~v~~~------~~~~~~~~~ 144 (312)
T 4gcm_A 72 AKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKK-IGVPGEQELGGRGVSYC------AVCDGAFFK 144 (312)
T ss_dssp HHHTTCEEEECCCCEEEECSSCEEEECSSCEEEEEEEEECCCEEECC-CCCTTTTTTBTTTEESC------HHHHGGGGT
T ss_pred HhhccccccceeeeeeeeeecceeeccCCeEEEeceeEEcccCccCc-CCCCChhhhCCccEEee------eccCccccC
Confidence 55667777767666666666667777788899999999999999874 55665332 233322 222233456
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCc--EE
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGR--VA 284 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~--v~ 284 (306)
+++++|||+|++|+|+|..+++.+.+|+++.+.+.+.+. . ....+.+++.++.......+..+...+... ..
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQ---R---ILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVT 218 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSC---H---HHHHHHHHCTTEEEECSEEEEEEEEETTEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCcc---h---hHHHHHHHhcCcceeeecceeeeeccccccccce
Confidence 899999999999999999999999999999999887763 1 223456677889988888777766432211 11
Q ss_pred EEEeCC--CCEEecCEEEEecCC
Q 021871 285 AVKLED--GSTIDADTVILLPYD 305 (306)
Q Consensus 285 ~v~~~~--G~~i~~d~vv~a~g~ 305 (306)
.....+ +..+++|.|++++|.
T Consensus 219 ~~~~~~~~~~~~~~d~v~~~~g~ 241 (312)
T 4gcm_A 219 LTSTKDGSEETHEADGVFIYIGM 241 (312)
T ss_dssp EEETTTCCEEEEECSEEEECSCE
T ss_pred eeeecCCceeEEeeeeEEeecCC
Confidence 122222 347899999999874
No 54
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.93 E-value=2.1e-26 Score=207.73 Aligned_cols=238 Identities=19% Similarity=0.323 Sum_probs=164.9
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC-CCC-Ccc-----------------ccccccCCCCCCCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP-YER-PAL-----------------TKGYLFPLDKKPARL 111 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~-~~~-~~~-----------------~~~~~~~~~~~~~~~ 111 (306)
.+||+|||||++|+++|++|+++|+ +|+|+|+...-+ +.. ... ...+.+.......++
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~---~V~liEk~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGK---KVAIAEEFRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDW 81 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTC---CEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCC---EEEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCH
Confidence 5899999999999999999999998 999999943211 000 000 000000000000111
Q ss_pred CCccccc---CCCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEc-CCCcEEecCcEEEeeCCCCccCCCCCCCCCCC
Q 021871 112 PGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLIT-NSGKLLKYGSLIVATGCTASRFPEKIGGYLPG 187 (306)
Q Consensus 112 ~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~-~~g~~~~~~~lila~G~~~~~~~~~~~~~~~g 187 (306)
+.+.... .......+..++++.++++..+ .+..++ ...+.+ .++..+.||++|+|||+.+...|++ +|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~--~~~v~~~~~~~~~~~d~lviAtG~~p~~~p~i-----~G 153 (463)
T 4dna_A 82 AKLVAAKEQEIARLEGLYRKGLANAGAEILDT-RAELAG--PNTVKLLASGKTVTAERIVIAVGGHPSPHDAL-----PG 153 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEES-CEEESS--SSEEEETTTTEEEEEEEEEECCCEEECCCTTS-----TT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEee--CCEEEEecCCeEEEeCEEEEecCCCcccCCCC-----CC
Confidence 0000000 0000112233455568888876 554443 456666 5677899999999999987623443 33
Q ss_pred EEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEE
Q 021871 188 VHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFV 267 (306)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~ 267 (306)
... ..+++.++.....+++++|+|+|.+++|+|..+...+.+|+++.+.+.+++. +++.+.+.+.+.++++||+++
T Consensus 154 ~~~---~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~i~ 229 (463)
T 4dna_A 154 HEL---CITSNEAFDLPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSR-FDQDMRRGLHAAMEEKGIRIL 229 (463)
T ss_dssp GGG---CBCHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHTTCEEE
T ss_pred ccc---cccHHHHhhhhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHHHHHHHHHHHHCCCEEE
Confidence 321 2234444444445889999999999999999999999999999999998875 799999999999999999999
Q ss_pred cCceEEEEEeCCCCcEEEEE-eCCCCEEecCEEEEecCC
Q 021871 268 KGASIKNLEAGSDGRVAAVK-LEDGSTIDADTVILLPYD 305 (306)
Q Consensus 268 ~~~~v~~i~~~~~~~v~~v~-~~~G~~i~~d~vv~a~g~ 305 (306)
++++|++++.++++.+ .|. +.+|+ +++|.||+|+|.
T Consensus 230 ~~~~v~~i~~~~~~~~-~v~~~~~g~-i~aD~Vv~a~G~ 266 (463)
T 4dna_A 230 CEDIIQSVSADADGRR-VATTMKHGE-IVADQVMLALGR 266 (463)
T ss_dssp CSCCEEEEEECTTSCE-EEEESSSCE-EEESEEEECSCE
T ss_pred CCCEEEEEEEcCCCEE-EEEEcCCCe-EEeCEEEEeeCc
Confidence 9999999997545544 688 88887 999999999985
No 55
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.93 E-value=6.5e-26 Score=194.36 Aligned_cols=238 Identities=19% Similarity=0.223 Sum_probs=156.3
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCccccc-CCCCCcCChh
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCV-GSGGERQTPE 128 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 128 (306)
+.+||+|||||||||+||.+|+++|+ +|+|+|+....+.. .+|++.. .....++|+|+... ..++...+..
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~---~v~liE~~~~gg~~----~~G~~~~-~~~i~~~~g~~~~i~~~~l~~~~~~ 74 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSL---KPVMYEGFMAGGVA----AGGQLTT-TTIIENFPGFPNGIDGNELMMNMRT 74 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTC---CCEEECCSSGGGCC----TTCGGGG-SSEECCSTTCTTCEEHHHHHHHHHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC---CEEEEecCCCCCcc----cCCCcCC-hHHhhhccCCcccCCHHHHHHHHHH
Confidence 46899999999999999999999998 99999987543211 1233322 11122344443211 1112234445
Q ss_pred HHhhcCeEEEeCCcEEEEeCCC--CEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCCCCCEEEEccHHHHHHHHHhhhc
Q 021871 129 WYKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSLEK 206 (306)
Q Consensus 129 ~~~~~~v~~~~~~~v~~v~~~~--~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 206 (306)
.+++.+..+... .+....... ..+.+.++..+.||++|+|||+.++. |++|+.+.............+. ......
T Consensus 75 ~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~-~~ipG~~~~~~~~~~~~~~~~~-~~~~~~ 151 (314)
T 4a5l_A 75 QSEKYGTTIITE-TIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKR-MHVPGEDKYWQNGVSACAICDG-AVPIFR 151 (314)
T ss_dssp HHHHTTCEEECC-CEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECC-CCCTTHHHHBTTTEESCHHHHT-TSGGGT
T ss_pred HHhhcCcEEEEe-EEEEeecCCCceEEEECCCeEEEEeEEEEcccccccc-cCCCccccccccceeeehhhhh-hhhhcC
Confidence 566778887754 566655543 35667778899999999999998874 4444422111000111112221 122345
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEE
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAV 286 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v 286 (306)
+++++|||+|.+|+|+|..+++++.+|+++.|.+.... .. ....+.....+++.+..+.+..+... +....++
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~ 224 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRA---SK---TMQERVLNHPKIEVIWNSELVELEGD-GDLLNGA 224 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CH---HHHHHHHTCTTEEEECSEEEEEEEES-SSSEEEE
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccc---cc---hhhhhhhcccceeeEeeeeeEEEEee-eecccee
Confidence 78999999999999999999999999999998876544 22 22345556678999999999888863 3333334
Q ss_pred Ee-----CCCCEEecCEEEEecCC
Q 021871 287 KL-----EDGSTIDADTVILLPYD 305 (306)
Q Consensus 287 ~~-----~~G~~i~~d~vv~a~g~ 305 (306)
.. .+++++++|.|++|+|.
T Consensus 225 ~~~~~~~~~~~~i~~d~vi~a~G~ 248 (314)
T 4a5l_A 225 KIHNLVSGEYKVVPVAGLFYAIGH 248 (314)
T ss_dssp EEEETTTCCEEEEECSEEEECSCE
T ss_pred EEeecccccceeeccccceEeccc
Confidence 33 33457999999999985
No 56
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.93 E-value=7.8e-25 Score=197.12 Aligned_cols=236 Identities=19% Similarity=0.274 Sum_probs=161.4
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCcccccccc-----------CC-CCCCCCCC------C
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLF-----------PL-DKKPARLP------G 113 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~-----------~~-~~~~~~~~------~ 113 (306)
+||+|||||++|+++|.+|++.|+ +|+|+|+++..+-. ....++.. .. ......++ .
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~---~V~lie~~~~~GG~--~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~ 76 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGM---KVGVVEKEKALGGT--CLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELD 76 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSSHH--HHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEEC
T ss_pred CCEEEECCChhHHHHHHHHHHCCC---eEEEEeCCCCCCCc--cceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccC
Confidence 699999999999999999999998 99999998643210 00000000 00 00000000 0
Q ss_pred cccccC------CCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcC-CCcEEecCcEEEeeCCCCccCCCCCCCCCC
Q 021871 114 FHTCVG------SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITN-SGKLLKYGSLIVATGCTASRFPEKIGGYLP 186 (306)
Q Consensus 114 ~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~-~g~~~~~~~lila~G~~~~~~~~~~~~~~~ 186 (306)
+..+.. ......+..++++.+++++.+..+ .++ ...+.+. ++..+.||++|+|||+.+.. |+.++.+.+
T Consensus 77 ~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~-~i~--~~~~~v~~~g~~~~~d~lviAtG~~p~~-~~~~g~~~~ 152 (455)
T 2yqu_A 77 LPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTAR-FLS--ERKVLVEETGEELEARYILIATGSAPLI-PPWAQVDYE 152 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEE-ESS--SSEEEETTTCCEEEEEEEEECCCEEECC-CTTBCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEE-Eec--CCeEEEeeCCEEEEecEEEECCCCCCCC-CCCCCCCcC
Confidence 000000 000011234456678999877543 333 3333333 56789999999999998774 444443222
Q ss_pred CEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEE
Q 021871 187 GVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKF 266 (306)
Q Consensus 187 g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i 266 (306)
++. +.....+....+++++|||+|.+|+++|..+.+.+.+|+++.+.+.+++. .++.+.+.+.+.+++.||++
T Consensus 153 ~v~------~~~~~~~~~~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~i 225 (455)
T 2yqu_A 153 RVV------TSTEALSFPEVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT-MDLEVSRAAERVFKKQGLTI 225 (455)
T ss_dssp SEE------CHHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHHHTCEE
T ss_pred cEe------chHHhhccccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc-cCHHHHHHHHHHHHHCCCEE
Confidence 322 23333322235789999999999999999999999999999999998875 78899999999999999999
Q ss_pred EcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 267 VKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 267 ~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+++++|++++.+ ++.+ .+++.+|+++++|.||+|+|.
T Consensus 226 ~~~~~V~~i~~~-~~~v-~v~~~~g~~i~~D~vv~A~G~ 262 (455)
T 2yqu_A 226 RTGVRVTAVVPE-AKGA-RVELEGGEVLEADRVLVAVGR 262 (455)
T ss_dssp ECSCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECSCE
T ss_pred EECCEEEEEEEe-CCEE-EEEECCCeEEEcCEEEECcCC
Confidence 999999999963 3333 577778889999999999985
No 57
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.93 E-value=3.5e-26 Score=207.39 Aligned_cols=238 Identities=21% Similarity=0.279 Sum_probs=164.0
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC-CCC-Ccc-----------------ccccccCCCCCCCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP-YER-PAL-----------------TKGYLFPLDKKPARL 111 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~-~~~-~~~-----------------~~~~~~~~~~~~~~~ 111 (306)
.+||+|||||++||++|++|+++|+ +|+|+|+...-+ +.. ... ..++.+.......++
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~---~V~liEk~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 102 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGK---RVAIAEEYRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNW 102 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcC---EEEEEeCCCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCH
Confidence 5799999999999999999999998 999999943211 000 000 000001100000110
Q ss_pred CCcccc---cCCCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcC-CCcEEecCcEEEeeCCCCccCCCCCCCCCCC
Q 021871 112 PGFHTC---VGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITN-SGKLLKYGSLIVATGCTASRFPEKIGGYLPG 187 (306)
Q Consensus 112 ~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~-~g~~~~~~~lila~G~~~~~~~~~~~~~~~g 187 (306)
+.+... ........+...+++.++++..+ .+..++. ..+.+. ++..+.||++++|+|+.+...|.+++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~~--~~v~v~~~~~~~~~d~lviAtG~~p~~~p~i~G----- 174 (484)
T 3o0h_A 103 EKLVAAKNKEISRLEGLYREGLQNSNVHIYES-RAVFVDE--HTLELSVTGERISAEKILIATGAKIVSNSAIKG----- 174 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEET--TEEEETTTCCEEEEEEEEECCCEEECCC--CBT-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEeeC--CEEEEecCCeEEEeCEEEEccCCCcccCCCCCC-----
Confidence 000000 00000112234455678998876 5656653 456665 67789999999999998762344443
Q ss_pred EEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEE
Q 021871 188 VHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFV 267 (306)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~ 267 (306)
...+ .+++.+......+++++|+|+|.+++++|..+.+.+.+|+++.+.+.+++. +++.+.+.+.+.+++.||+++
T Consensus 175 ~~~~---~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~i~ 250 (484)
T 3o0h_A 175 SDLC---LTSNEIFDLEKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRN-FDYDLRQLLNDAMVAKGISII 250 (484)
T ss_dssp GGGS---BCTTTGGGCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHHTCEEE
T ss_pred cccc---ccHHHHHhHHhcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccc-cCHHHHHHHHHHHHHCCCEEE
Confidence 2111 122222223345889999999999999999999999999999999998876 789999999999999999999
Q ss_pred cCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 268 KGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 268 ~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
++++|++++.+ ++.+ .|.+.+|+++++|.||+|+|.
T Consensus 251 ~~~~V~~i~~~-~~~v-~v~~~~g~~i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 251 YEATVSQVQST-ENCY-NVVLTNGQTICADRVMLATGR 286 (484)
T ss_dssp SSCCEEEEEEC-SSSE-EEEETTSCEEEESEEEECCCE
T ss_pred eCCEEEEEEee-CCEE-EEEECCCcEEEcCEEEEeeCC
Confidence 99999999974 4444 688999989999999999985
No 58
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.93 E-value=1.3e-25 Score=194.10 Aligned_cols=239 Identities=18% Similarity=0.233 Sum_probs=155.3
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCccc-ccCCCCCcCChh
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHT-CVGSGGERQTPE 128 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 128 (306)
+++||+|||||++|+++|+.|++.|+ +|+|+|+..... ....+.+... .....+|.+.. .........+..
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~---~v~lie~~~~~~----~~~gg~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 78 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAEL---KPLLFEGWMAND----IAPGGQLTTT-TDVENFPGFPEGILGVELTDKFRK 78 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CCEEECCSSBTT----BCTTCGGGGC-SEECCSTTCTTCEEHHHHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC---eEEEEeccCccc----cCCCceeeec-cccccCCCCccCCCHHHHHHHHHH
Confidence 34799999999999999999999998 999999821110 0011111100 00111222211 000111234445
Q ss_pred HHhhcCeEEEeCCcEEEEeCCCC--EEEcCCCcEEecCcEEEeeCCCCccCCCCCCCCC-CCEEEEccHHHHHHHHHhh-
Q 021871 129 WYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL-PGVHYIRDVADADALISSL- 204 (306)
Q Consensus 129 ~~~~~~v~~~~~~~v~~v~~~~~--~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~- 204 (306)
.+.+.+++++.++ +..++.... .+.+ ++..++||++|+|+|..+.. |.+++... .+.+..+.+..+.......
T Consensus 79 ~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 155 (333)
T 1vdc_A 79 QSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKR-LSFVGSGEVLGGFWNRGISACAVCDGAAP 155 (333)
T ss_dssp HHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECC-CCCBTCSSSSSCCBTTTEESCHHHHTTSG
T ss_pred HHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCC-CCCCCccccccccccCcEEEeccCccchh
Confidence 5667899998875 888887544 6666 67789999999999998764 44555322 1101001111111222222
Q ss_pred -hcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCC-c
Q 021871 205 -EKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDG-R 282 (306)
Q Consensus 205 -~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~-~ 282 (306)
..+++++|+|+|.+++|+|..|.+.+.+|+++.+.+.+.. .+.+ ..+.+++.||++++++.|++++.++++ .
T Consensus 156 ~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~---~~~~---~~~~~~~~gv~i~~~~~v~~i~~~~~~~~ 229 (333)
T 1vdc_A 156 IFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA---SKIM---QQRALSNPKIDVIWNSSVVEAYGDGERDV 229 (333)
T ss_dssp GGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHHH---HHHHHTCTTEEEECSEEEEEEEESSSSSS
T ss_pred hcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc---cHHH---HHHHHhCCCeeEecCCceEEEeCCCCccc
Confidence 5688999999999999999999999999999999987643 2222 224456789999999999999963321 4
Q ss_pred EEEEEeC---CC--CEEecCEEEEecCC
Q 021871 283 VAAVKLE---DG--STIDADTVILLPYD 305 (306)
Q Consensus 283 v~~v~~~---~G--~~i~~d~vv~a~g~ 305 (306)
+.+|.+. +| +++++|.||+|+|.
T Consensus 230 v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 257 (333)
T 1vdc_A 230 LGGLKVKNVVTGDVSDLKVSGLFFAIGH 257 (333)
T ss_dssp EEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred eeeEEEEecCCCceEEEecCEEEEEeCC
Confidence 4445554 45 47999999999985
No 59
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.93 E-value=1.9e-25 Score=195.78 Aligned_cols=241 Identities=18% Similarity=0.224 Sum_probs=155.6
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC-----CCCC-c-ccccc---ccCCCC---CCCC-CCCcc
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP-----YERP-A-LTKGY---LFPLDK---KPAR-LPGFH 115 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~-----~~~~-~-~~~~~---~~~~~~---~~~~-~~~~~ 115 (306)
+.+||+|||||++|+++|++|++.|+. +|+|+|+++ .+ +... . ....+ .+.... .... .+.+.
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~--~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 79 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGIT--DVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFT 79 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC--CEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHH
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCC--cEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhcccccccccc
Confidence 347999999999999999999999863 799999986 22 1000 0 00000 000000 0000 00000
Q ss_pred c----ccCCCCCcCChhHHhhcCeEEEeCCcEEEEeCC--CCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCCCCCEE
Q 021871 116 T----CVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIE--KQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVH 189 (306)
Q Consensus 116 ~----~~~~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~--~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~~~g~~ 189 (306)
. ........++...+++.+++++++++|.+++.+ ...+.+.++ .+.||+||+|+|..+. |.+|+ ....
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~--p~ip~---~~~~ 153 (369)
T 3d1c_A 80 FNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF--PKKPF---KYGI 153 (369)
T ss_dssp HCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS--BCCCS---SSCE
T ss_pred ccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc--cCCCC---Ccee
Confidence 0 000000122344456689999999999999875 346776666 5899999999999865 33333 1222
Q ss_pred EEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccccc------ccCHHHHHHHHHHHHHcC
Q 021871 190 YIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------LFTPSLAQRYEQLYQQNG 263 (306)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~g 263 (306)
+...+.+. ....+++|+|||+|.+|+|+|..|.+.+.+|+++.+.+.+.+. .+++.+.+.+.+.+++.|
T Consensus 154 ~~~~~~~~-----~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g 228 (369)
T 3d1c_A 154 HYSEIEDF-----DNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGA 228 (369)
T ss_dssp EGGGCSCG-----GGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHHHHHHHHTTC
T ss_pred chhhcCCh-----hhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCC
Confidence 22111111 1124679999999999999999999999999999999877632 145677788889999997
Q ss_pred -CEEEcCceEEEEEeCCCCcEEEEEeCCCCEEe-cCEEEEecCCC
Q 021871 264 -VKFVKGASIKNLEAGSDGRVAAVKLEDGSTID-ADTVILLPYDQ 306 (306)
Q Consensus 264 -v~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~-~d~vv~a~g~~ 306 (306)
|+++.++.|.+++.. ++.+ .|.+.+|+.+. +|.||+|+|..
T Consensus 229 ~v~~~~~~~v~~i~~~-~~~~-~v~~~~g~~~~~~d~vi~a~G~~ 271 (369)
T 3d1c_A 229 RIEMNVHYTVKDIDFN-NGQY-HISFDSGQSVHTPHEPILATGFD 271 (369)
T ss_dssp CEEEECSCCEEEEEEE-TTEE-EEEESSSCCEEESSCCEECCCBC
T ss_pred cEEEecCcEEEEEEec-CCce-EEEecCCeEeccCCceEEeeccC
Confidence 999999999999752 3333 57788897775 59999999963
No 60
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.93 E-value=1.1e-24 Score=196.89 Aligned_cols=241 Identities=19% Similarity=0.288 Sum_probs=164.8
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccc-----------------------cCCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYL-----------------------FPLD 105 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~-----------------------~~~~ 105 (306)
+.++||+|||||++|+++|.+|++.|+ +|+|+|+++..+-.. ...++. ....
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~---~V~liE~~~~~GG~~--~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~ 78 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGF---KTTCIEKRGALGGTC--LNVGCIPSKALLHSSHMYHEAKHSFANHGVKVS 78 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTC---CEEEEECSSSSCCSH--HHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEES
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCC---eEEEEeCCCCccccc--cCcCccchHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 346899999999999999999999998 999999986542110 000000 0000
Q ss_pred CCCCCCCCccccc---CCCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcCCC--cEEecCcEEEeeCCCCccCCCC
Q 021871 106 KKPARLPGFHTCV---GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTASRFPEK 180 (306)
Q Consensus 106 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g--~~~~~~~lila~G~~~~~~~~~ 180 (306)
....++..+.... .......+...+++.+++++.++.+. ++.....+.+.+| ..++||++|+|+|+.+.. |++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~-p~~ 156 (470)
T 1dxl_A 79 NVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF-VSPSEISVDTIEGENTVVKGKHIIIATGSDVKS-LPG 156 (470)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-EETTEEEECCSSSCCEEEECSEEEECCCEEECC-BTT
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-ecCCEEEEEeCCCceEEEEcCEEEECCCCCCCC-CCC
Confidence 0000000000000 00000112344566789999886553 6654445555566 689999999999998874 444
Q ss_pred CCCCCCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHH
Q 021871 181 IGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQ 260 (306)
Q Consensus 181 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (306)
++.+.+++. +.....+....+++++|||+|.+|+|+|..+.+.+.+|+++.+.+.+++. +++.+.+.+.+.++
T Consensus 157 ~g~~~~~v~------~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-~~~~~~~~l~~~l~ 229 (470)
T 1dxl_A 157 VTIDEKKIV------SSTGALALSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT-MDAEIRKQFQRSLE 229 (470)
T ss_dssp BCCCSSSEE------CHHHHTTCSSCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-SCHHHHHHHHHHHH
T ss_pred CCCCcccEE------eHHHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-ccHHHHHHHHHHHH
Confidence 443333332 23333332235789999999999999999999999999999999999885 78999999999999
Q ss_pred HcCCEEEcCceEEEEEeCCCCcEEEEEeC---CC--CEEecCEEEEecCC
Q 021871 261 QNGVKFVKGASIKNLEAGSDGRVAAVKLE---DG--STIDADTVILLPYD 305 (306)
Q Consensus 261 ~~gv~i~~~~~v~~i~~~~~~~v~~v~~~---~G--~~i~~d~vv~a~g~ 305 (306)
+.||+++++++|.+++.++++ + .+.+. +| +++++|.||+|+|.
T Consensus 230 ~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~~~~g~~~~~~~D~vv~a~G~ 277 (470)
T 1dxl_A 230 KQGMKFKLKTKVVGVDTSGDG-V-KLTVEPSAGGEQTIIEADVVLVSAGR 277 (470)
T ss_dssp HSSCCEECSEEEEEEECSSSS-E-EEEEEESSSCCCEEEEESEEECCCCE
T ss_pred HcCCEEEeCCEEEEEEEcCCe-E-EEEEEecCCCcceEEECCEEEECCCC
Confidence 999999999999999964333 3 35543 44 57999999999985
No 61
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.93 E-value=2.3e-25 Score=200.61 Aligned_cols=234 Identities=23% Similarity=0.311 Sum_probs=161.8
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccc----------------------cCCCCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYL----------------------FPLDKKP 108 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~----------------------~~~~~~~ 108 (306)
++||+|||||++|+++|.+|++.|+ +|+|+|++. .+- .....+++ .......
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~---~V~lie~~~-~gG--~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~ 76 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQ---KVTIVEKGN-LGG--VCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVT 76 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSC-TTH--HHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC---eEEEEECCC-CCC--cCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCc
Confidence 4799999999999999999999998 999999973 210 00000000 0000000
Q ss_pred CCCCCcccccC------CCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcCCC-cEEecCcEEEeeCCCCccCCCCC
Q 021871 109 ARLPGFHTCVG------SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG-KLLKYGSLIVATGCTASRFPEKI 181 (306)
Q Consensus 109 ~~~~~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g-~~~~~~~lila~G~~~~~~~~~~ 181 (306)
.+ +..+.. ......+...+++.+++++.++.+ .++.....+.+.++ ..+.||++|+|||+.+.. |+++
T Consensus 77 ~~---~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~id~~~v~V~~~~G~~~i~~d~lViATGs~p~~-~~~~ 151 (455)
T 1ebd_A 77 ID---FAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAY-FVDANTVRVVNGDSAQTYTFKNAIIATGSRPIE-LPNF 151 (455)
T ss_dssp EC---HHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEE-EEETTEEEEEETTEEEEEECSEEEECCCEEECC-BTTB
T ss_pred cC---HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-EccCCeEEEEeCCCcEEEEeCEEEEecCCCCCC-CCCC
Confidence 00 000000 000011234556678999888544 46655556666666 679999999999998874 3344
Q ss_pred CCCCCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHH
Q 021871 182 GGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQ 261 (306)
Q Consensus 182 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (306)
+.+.. + + +.....+....+++++|||+|.+|+|+|..+.+.+.+|+++.+.+.+++. +++.+.+.+.+.+++
T Consensus 152 g~~~~-v--~----~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~ 223 (455)
T 1ebd_A 152 KFSNR-I--L----DSTGALNLGEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG-FEKQMAAIIKKRLKK 223 (455)
T ss_dssp CCCSS-E--E----CHHHHHTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-SCHHHHHHHHHHHHH
T ss_pred Cccce-E--e----cHHHHhccccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-cCHHHHHHHHHHHHH
Confidence 42211 1 1 23333333335789999999999999999999999999999999998885 789999999999999
Q ss_pred cCCEEEcCceEEEEEeCCCCcEEEEEeC---CCCEEecCEEEEecCC
Q 021871 262 NGVKFVKGASIKNLEAGSDGRVAAVKLE---DGSTIDADTVILLPYD 305 (306)
Q Consensus 262 ~gv~i~~~~~v~~i~~~~~~~v~~v~~~---~G~~i~~d~vv~a~g~ 305 (306)
.||++++++.|++++.+ ++.+ .+.+. +|+++++|.||+|+|.
T Consensus 224 ~gv~i~~~~~v~~i~~~-~~~~-~v~~~~~g~~~~~~~D~vv~a~G~ 268 (455)
T 1ebd_A 224 KGVEVVTNALAKGAEER-EDGV-TVTYEANGETKTIDADYVLVTVGR 268 (455)
T ss_dssp TTCEEEESEEEEEEEEE-TTEE-EEEEEETTEEEEEEESEEEECSCE
T ss_pred CCCEEEeCCEEEEEEEe-CCeE-EEEEEeCCceeEEEcCEEEECcCC
Confidence 99999999999999863 3333 35543 4567999999999985
No 62
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.93 E-value=2.6e-25 Score=201.45 Aligned_cols=241 Identities=18% Similarity=0.259 Sum_probs=160.7
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccc-----------cCC---CCCCCCCC----
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYL-----------FPL---DKKPARLP---- 112 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~-----------~~~---~~~~~~~~---- 112 (306)
.+||+|||||++|+++|..|++.|+ +|+|+|+++..+-. ....+++ +.. ......++
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~---~V~liE~~~~~GG~--~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~ 79 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGF---NTACVEKRGKLGGT--CLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGD 79 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSSSSHH--HHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCC---eEEEEecCCCcCCc--cceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 4799999999999999999999998 99999996543200 0000000 000 00000000
Q ss_pred ---CcccccC------CCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcCCC--cE------EecCcEEEeeCCCCc
Q 021871 113 ---GFHTCVG------SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KL------LKYGSLIVATGCTAS 175 (306)
Q Consensus 113 ---~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g--~~------~~~~~lila~G~~~~ 175 (306)
.+..... ......+...+++.+++++.++.+. .+.....+.+.+| .. +.||+||+|+|+.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p~ 158 (478)
T 1v59_A 80 IKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSF-EDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVT 158 (478)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE-SSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEEC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-ccCCeEEEEecCCCcccccccceEEeCEEEECcCCCCC
Confidence 0000000 0000012344567899998886554 2333335555566 46 999999999998874
Q ss_pred cCCCCCCCCCCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHH
Q 021871 176 RFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRY 255 (306)
Q Consensus 176 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 255 (306)
.+ |+...++. .+.+++...+....+++++|||+|.+|+|+|..+++.+.+|+++.+.+.+++. +++.+.+.+
T Consensus 159 ~~---~g~~~~~~----~v~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l 230 (478)
T 1v59_A 159 PF---PGIEIDEE----KIVSSTGALSLKEIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS-MDGEVAKAT 230 (478)
T ss_dssp CC---TTCCCCSS----SEECHHHHTTCSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS-SCHHHHHHH
T ss_pred CC---CCCCCCCc----eEEcHHHHHhhhccCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc-cCHHHHHHH
Confidence 32 33223331 12233333332235789999999999999999999999999999999999884 799999999
Q ss_pred HHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeC-----CCCEEecCEEEEecCC
Q 021871 256 EQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE-----DGSTIDADTVILLPYD 305 (306)
Q Consensus 256 ~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~-----~G~~i~~d~vv~a~g~ 305 (306)
.+.+++.||+++++++|++++..+++....|.+. +|+++++|.||+|+|.
T Consensus 231 ~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 285 (478)
T 1v59_A 231 QKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGR 285 (478)
T ss_dssp HHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred HHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCC
Confidence 9999999999999999999985112322356654 3567999999999985
No 63
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.93 E-value=2.9e-25 Score=200.29 Aligned_cols=234 Identities=19% Similarity=0.248 Sum_probs=161.2
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC-C-CCCcccccc-c--------------cCC-CCCCCCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP-Y-ERPALTKGY-L--------------FPL-DKKPARLP 112 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~-~-~~~~~~~~~-~--------------~~~-~~~~~~~~ 112 (306)
.+||+|||||++|+++|.+|++.|+ +|+|+|+++.-+ + .....+... + +.. .....+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~---~V~lie~~~~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~-- 80 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGL---KVLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELD-- 80 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEEC--
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC---eEEEEeCCCCCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcC--
Confidence 5899999999999999999999998 999999986210 0 000000000 0 000 000000
Q ss_pred CcccccC------CCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCCCC
Q 021871 113 GFHTCVG------SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLP 186 (306)
Q Consensus 113 ~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~~~ 186 (306)
+..... ......+..++++.+++++.+..+ .++ .+.+.+. +..+.||+||+|||+.+..+|.+++. .
T Consensus 81 -~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~~--~~~v~v~-g~~~~~d~lViATGs~p~~p~gi~~~--~ 153 (464)
T 2eq6_A 81 -LKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFAR-LVG--PKEVEVG-GERYGAKSLILATGSEPLELKGFPFG--E 153 (464)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEE-EEE--TTEEEET-TEEEEEEEEEECCCEEECCBTTBCCS--S
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEE-Ecc--CCEEEEc-cEEEEeCEEEEcCCCCCCCCCCCCCC--C
Confidence 000000 000001233456689999887544 354 3566666 66899999999999988754423331 1
Q ss_pred CEEEEccHHHHHHHHHhhh-cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCE
Q 021871 187 GVHYIRDVADADALISSLE-KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVK 265 (306)
Q Consensus 187 g~~~~~~~~~~~~~~~~~~-~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 265 (306)
.+ + +.+.+.+... .+++++|||+|.+|+|+|..+++.+.+|+++.+.+.+++. +++.+.+.+.+.++++||+
T Consensus 154 ~v--~----~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~gV~ 226 (464)
T 2eq6_A 154 DV--W----DSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ-GDPETAALLRRALEKEGIR 226 (464)
T ss_dssp SE--E----CHHHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHTTCE
T ss_pred cE--E----cHHHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc-cCHHHHHHHHHHHHhcCCE
Confidence 22 1 3333333233 5789999999999999999999999999999999998885 7899999999999999999
Q ss_pred EEcCceEEEEEeCCCCcEEEEEeC-C--CC--EEecCEEEEecCC
Q 021871 266 FVKGASIKNLEAGSDGRVAAVKLE-D--GS--TIDADTVILLPYD 305 (306)
Q Consensus 266 i~~~~~v~~i~~~~~~~v~~v~~~-~--G~--~i~~d~vv~a~g~ 305 (306)
++++++|++++.+ ++.+ .|++. + |+ ++++|.||+|+|.
T Consensus 227 i~~~~~v~~i~~~-~~~~-~v~~~~~~~g~~~~i~~D~vv~a~G~ 269 (464)
T 2eq6_A 227 VRTKTKAVGYEKK-KDGL-HVRLEPAEGGEGEEVVVDKVLVAVGR 269 (464)
T ss_dssp EECSEEEEEEEEE-TTEE-EEEEEETTCCSCEEEEESEEEECSCE
T ss_pred EEcCCEEEEEEEe-CCEE-EEEEeecCCCceeEEEcCEEEECCCc
Confidence 9999999999863 3333 46665 6 76 8999999999985
No 64
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.93 E-value=6.9e-26 Score=206.84 Aligned_cols=243 Identities=19% Similarity=0.250 Sum_probs=159.9
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccc------cc--------------------c
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKG------YL--------------------F 102 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~------~~--------------------~ 102 (306)
+..+||+|||||++|+++|.+|++.|+ +|+|+|+.+...+......+| ++ +
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~---~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~ 106 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGK---KVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNY 106 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTC---CEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC---eEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhc
Confidence 346899999999999999999999998 999999865221111000111 00 0
Q ss_pred CCCCCCCCCCCcccccC------CCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcCCCc--EEecCcEEEeeCCCC
Q 021871 103 PLDKKPARLPGFHTCVG------SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGK--LLKYGSLIVATGCTA 174 (306)
Q Consensus 103 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~--~~~~~~lila~G~~~ 174 (306)
...........+..... ......+...+++.+++++.+ .+..++.....+...+|. .+.||+||+|||+.+
T Consensus 107 g~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g-~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p 185 (519)
T 3qfa_A 107 GWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENA-YGQFIGPHRIKATNNKGKEKIYSAERFLIATGERP 185 (519)
T ss_dssp TBCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEE
T ss_pred CcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCc
Confidence 00000000001110000 000001112345578888765 566677666667666664 799999999999988
Q ss_pred ccCCCCCCCCCCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHH
Q 021871 175 SRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQR 254 (306)
Q Consensus 175 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 254 (306)
.. |+ ++|... ...+++.+.+....+++++|||+|.+|+|+|..+.+.+.+|+++.+. .+++. +++++.+.
T Consensus 186 ~~-p~-----i~G~~~--~~~t~~~~~~l~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~l~~-~d~~~~~~ 255 (519)
T 3qfa_A 186 RY-LG-----IPGDKE--YCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS-ILLRG-FDQDMANK 255 (519)
T ss_dssp CC-CC-----CTTHHH--HCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTT-SCHHHHHH
T ss_pred CC-CC-----CCCccC--ceEcHHHHhhhhhcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc-ccccc-CCHHHHHH
Confidence 74 44 444210 01234444443445788999999999999999999999999999985 55554 68999999
Q ss_pred HHHHHHHcCCEEEcCceEEEEEeCCC---Cc-EEEEEeCCCC---EEecCEEEEecCC
Q 021871 255 YEQLYQQNGVKFVKGASIKNLEAGSD---GR-VAAVKLEDGS---TIDADTVILLPYD 305 (306)
Q Consensus 255 ~~~~~~~~gv~i~~~~~v~~i~~~~~---~~-v~~v~~~~G~---~i~~d~vv~a~g~ 305 (306)
+.+.++++||++++++.+++++..++ +. ...+...+|+ .+++|.||+|+|.
T Consensus 256 ~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~ 313 (519)
T 3qfa_A 256 IGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGR 313 (519)
T ss_dssp HHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCE
T ss_pred HHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCC
Confidence 99999999999999988888765322 32 2234445553 5689999999985
No 65
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.93 E-value=4e-25 Score=202.45 Aligned_cols=185 Identities=17% Similarity=0.138 Sum_probs=120.8
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCC-----CCCcc---ccccccCCCCC-----CCCCCCccc
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-----ERPAL---TKGYLFPLDKK-----PARLPGFHT 116 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~-----~~~~~---~~~~~~~~~~~-----~~~~~~~~~ 116 (306)
+.+||+|||||++|+++|.+|++.|+ +|+|+|+++..+- ..+.. .....+...-. ...+... .
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~---~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~-~ 95 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGL---TVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEK-Y 95 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSS-S
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCC---CEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccC-C
Confidence 45799999999999999999999998 9999999875430 00110 00000000000 0000000 0
Q ss_pred ccCCCCCcCChhHHhhcCe--EEEeCCcEEEEeCCCC----EEEcCCCcEEecCcEEEeeC--CCCccCCCCCCCC-CCC
Q 021871 117 CVGSGGERQTPEWYKEKGI--EMIYQDPVTSIDIEKQ----TLITNSGKLLKYGSLIVATG--CTASRFPEKIGGY-LPG 187 (306)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~v--~~~~~~~v~~v~~~~~----~v~~~~g~~~~~~~lila~G--~~~~~~~~~~~~~-~~g 187 (306)
....+...++...+++.++ +++++++|.+++.+.. .+.+.+|..+.||+||+|+| +.+. .|.++|.+ ..+
T Consensus 96 ~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~-~p~ipG~~~f~g 174 (549)
T 4ap3_A 96 ATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNAN-TPAFDGLDRFTG 174 (549)
T ss_dssp CBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECC-CCCCTTGGGCCS
T ss_pred CCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCC-CCCCCCcccCCC
Confidence 0001112344455667777 7888999999986554 78888888899999999999 5555 45555533 334
Q ss_pred EEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcc
Q 021871 188 VHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (306)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~ 242 (306)
.......+..+ .....+++|+|||+|.+|+|+|..|++.+.+|++++|.+.+
T Consensus 175 ~~~~~~~~~~~---~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 175 DIVHTARWPHD---GVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp EEEEGGGCCTT---CCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred ceEEecccccc---ccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 33221111100 11225899999999999999999999999999999999875
No 66
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.93 E-value=2.9e-26 Score=209.80 Aligned_cols=189 Identities=15% Similarity=0.144 Sum_probs=118.7
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCC-----CCCcc----c---cccccCCCC-CCCCCCCcc
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-----ERPAL----T---KGYLFPLDK-KPARLPGFH 115 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~-----~~~~~----~---~~~~~~~~~-~~~~~~~~~ 115 (306)
+..+||+|||||++|+++|++|++.|+ +|+|+|+++..+- ..+.. . .++.+.... ....+....
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~---~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~ 83 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGM---KVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENF 83 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCC---CEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccC
Confidence 345799999999999999999999998 8999999876431 00100 0 000000000 000010000
Q ss_pred cccCCCCCcCChhHHhhcCe--EEEeCCcEEEEeCCCC----EEEcCCCcEEecCcEEEeeC--CCCccCCCCCCCC-CC
Q 021871 116 TCVGSGGERQTPEWYKEKGI--EMIYQDPVTSIDIEKQ----TLITNSGKLLKYGSLIVATG--CTASRFPEKIGGY-LP 186 (306)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~v--~~~~~~~v~~v~~~~~----~v~~~~g~~~~~~~lila~G--~~~~~~~~~~~~~-~~ 186 (306)
....+...++...+++.++ +++++++|.+++.+.. .|.+++|..+.||+||+|+| +.+. .|.++|.+ ..
T Consensus 84 -~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~-~p~ipG~~~f~ 161 (545)
T 3uox_A 84 -ASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASR-MPDIKGIDSFK 161 (545)
T ss_dssp -CBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC----CCCTTGGGCC
T ss_pred -CCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCc-CCCCCCccccC
Confidence 0001112344455666676 6788999999986543 78888998999999999999 5555 35555532 33
Q ss_pred CEEEEccHHHHH--HHH-HhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcc
Q 021871 187 GVHYIRDVADAD--ALI-SSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (306)
Q Consensus 187 g~~~~~~~~~~~--~~~-~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~ 242 (306)
+.......+..+ ... .....+++|+|||+|.+|+|+|..|++.+.+|++++|.+.+
T Consensus 162 g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 162 GESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp SEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred CCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 332221111100 000 01235789999999999999999999999999999999874
No 67
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.93 E-value=4e-25 Score=200.43 Aligned_cols=242 Identities=22% Similarity=0.324 Sum_probs=160.4
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC-------CCCCccccccc--------------------
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP-------YERPALTKGYL-------------------- 101 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~-------~~~~~~~~~~~-------------------- 101 (306)
+..+||+|||||++|+++|++|++.|+ +|+|+|+..... +.....+.++.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~---~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~ 83 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGA---RVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAA 83 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTC---CEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCC---EEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHh
Confidence 346899999999999999999999998 999999532110 11000000100
Q ss_pred cCCCCCCCCCCCcccccC------CCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcCCCc-EEecCcEEEeeCCCC
Q 021871 102 FPLDKKPARLPGFHTCVG------SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGK-LLKYGSLIVATGCTA 174 (306)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~-~~~~~~lila~G~~~ 174 (306)
+...........+..... ..........+++.++++..+ ....++.....+.+.++. .+.||++|+|||+.+
T Consensus 84 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs~p 162 (483)
T 3dgh_A 84 YGWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYING-LGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRP 162 (483)
T ss_dssp TTBCCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCEEEEEEEEEECCCEEE
T ss_pred cCcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEccCCEEEEEeCCCeEEEEcCEEEEeCCCCc
Confidence 000000000001100000 000001112345568888755 555566555566666664 799999999999988
Q ss_pred ccCCCCCCCCCCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHH
Q 021871 175 SRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQR 254 (306)
Q Consensus 175 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 254 (306)
.. |+ ++|.... ..+++.+......+++++|||+|.+|+|+|..+.+.+.+|+++.+. .+++. +++++.+.
T Consensus 163 ~~-p~-----i~G~~~~--~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~~-~d~~~~~~ 232 (483)
T 3dgh_A 163 RY-PD-----IPGAVEY--GITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS-IVLRG-FDQQMAEL 232 (483)
T ss_dssp CC-CS-----STTHHHH--CBCHHHHTTCSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-CSSTT-SCHHHHHH
T ss_pred CC-CC-----CCCcccc--cCcHHHHhhhhhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC-CCCcc-cCHHHHHH
Confidence 74 44 4443100 1133444443345789999999999999999999999999999984 45554 68999999
Q ss_pred HHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCC-----EEecCEEEEecCC
Q 021871 255 YEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS-----TIDADTVILLPYD 305 (306)
Q Consensus 255 ~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~-----~i~~d~vv~a~g~ 305 (306)
+.+.++++||++++++.|.+++..+++.+ .|.+.+++ ++++|.||+|+|.
T Consensus 233 l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 233 VAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp HHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCE
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECccc
Confidence 99999999999999999999997555544 46666553 7999999999985
No 68
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.93 E-value=4.1e-26 Score=206.82 Aligned_cols=237 Identities=16% Similarity=0.216 Sum_probs=161.1
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCC---CCccc-----------------cccccCCCCCCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE---RPALT-----------------KGYLFPLDKKPAR 110 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~---~~~~~-----------------~~~~~~~~~~~~~ 110 (306)
.+||+|||||++|+++|++|++.|+ +|+|+|+++..+-. ....+ ..+-........+
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~---~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~ 82 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGL---KVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELD 82 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccC
Confidence 4799999999999999999999998 99999996553200 00000 0000000000000
Q ss_pred CCCcccccC------CCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcCCC------------cEEecCcEEEeeCC
Q 021871 111 LPGFHTCVG------SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG------------KLLKYGSLIVATGC 172 (306)
Q Consensus 111 ~~~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g------------~~~~~~~lila~G~ 172 (306)
+..... ......+...+++.+++++.++.+. ++.....+.+.++ ..++||++|+|+|+
T Consensus 83 ---~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs 158 (482)
T 1ojt_A 83 ---IDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF-LDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGS 158 (482)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE-EETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCE
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE-ccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCC
Confidence 000000 0000012244566789988775443 4433233443444 57999999999999
Q ss_pred CCccCCCCCCCCCCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHH
Q 021871 173 TASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLA 252 (306)
Q Consensus 173 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~ 252 (306)
.+..+|.++. + ..+. +.....+....+++++|||+|.+|+|+|..+.+.+.+|+++.+.+++++. +++.+.
T Consensus 159 ~p~~~~~i~~-~-~~v~------~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~~ 229 (482)
T 1ojt_A 159 RVTKLPFIPE-D-PRII------DSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG-ADRDLV 229 (482)
T ss_dssp EECCCSSCCC-C-TTEE------CHHHHTTCCCCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-SCHHHH
T ss_pred CCCCCCCCCc-c-CcEE------cHHHHhcccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-cCHHHH
Confidence 9875442331 1 1221 33333332335789999999999999999999999999999999999886 799999
Q ss_pred HHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCC----CCEEecCEEEEecCC
Q 021871 253 QRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED----GSTIDADTVILLPYD 305 (306)
Q Consensus 253 ~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~----G~~i~~d~vv~a~g~ 305 (306)
+.+.+.++++||++++++.|++++.+ ++.+ .|.+.+ |+++++|.||+|+|.
T Consensus 230 ~~l~~~l~~~gV~i~~~~~v~~i~~~-~~~~-~v~~~~~~~~g~~~~~D~vv~a~G~ 284 (482)
T 1ojt_A 230 KVWQKQNEYRFDNIMVNTKTVAVEPK-EDGV-YVTFEGANAPKEPQRYDAVLVAAGR 284 (482)
T ss_dssp HHHHHHHGGGEEEEECSCEEEEEEEE-TTEE-EEEEESSSCCSSCEEESCEEECCCE
T ss_pred HHHHHHHHhcCCEEEECCEEEEEEEc-CCeE-EEEEeccCCCceEEEcCEEEECcCC
Confidence 99999999999999999999999863 3332 566666 778999999999985
No 69
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.93 E-value=2.2e-25 Score=190.30 Aligned_cols=221 Identities=13% Similarity=0.124 Sum_probs=144.7
Q ss_pred cCCCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCccc---ccCCCCC
Q 021871 47 FANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHT---CVGSGGE 123 (306)
Q Consensus 47 ~~~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 123 (306)
++|+.+||+|||||||||+||.+|+++|+ +|+|+|++...+ .+.. .+++|.. ....+..
T Consensus 2 n~M~~yDVvIIGaGpAGlsAA~~lar~g~---~v~lie~~~~gg---------~~~~------~~~~~~~~~~~~~~~~~ 63 (304)
T 4fk1_A 2 NAMKYIDCAVIGAGPAGLNASLVLGRARK---QIALFDNNTNRN---------RVTQ------NSHGFITRDGIKPEEFK 63 (304)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHTTC---CEEEEECSCCGG---------GGSS------CBCCSTTCTTBCHHHHH
T ss_pred CCCCCcCEEEECCCHHHHHHHHHHHHCCC---CEEEEeCCCCCC---------eeee------ecCCccCCCCCCHHHHH
Confidence 35778999999999999999999999998 999999874321 1100 0011100 0000000
Q ss_pred cCChhHHhhcC-eEEEeCCcEEEEeCC---CCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCC---CCCEEEEccHHH
Q 021871 124 RQTPEWYKEKG-IEMIYQDPVTSIDIE---KQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVAD 196 (306)
Q Consensus 124 ~~~~~~~~~~~-v~~~~~~~v~~v~~~---~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~---~~g~~~~~~~~~ 196 (306)
......+.+++ +.+... .+..+... ...+.+.+++.+.||+||+|||+.++. |++|+.+ ..++.+
T Consensus 64 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~-p~i~G~~~~~~~~v~~------ 135 (304)
T 4fk1_A 64 EIGLNEVMKYPSVHYYEK-TVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEEF-PSIPNVREYYGKSLFS------ 135 (304)
T ss_dssp HHHHHHHTTSTTEEEEEC-CEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEEC-CSCTTHHHHBTTTEES------
T ss_pred HHHHHHHHhcCCEEEEee-EEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCcccc-ccccCccccccceeee------
Confidence 11122233333 455443 55555432 347888889999999999999999874 5544421 122222
Q ss_pred HHHHHHhhhcCCeEEEEcCCHH-HHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEE
Q 021871 197 ADALISSLEKAKKVVVVGGGYI-GMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNL 275 (306)
Q Consensus 197 ~~~~~~~~~~~~~v~viG~g~~-a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i 275 (306)
+.........+++++|||+|.. +.++|..+...+.+|+++.+.+.+.. .+.+.+++.|++++.++ ++.+
T Consensus 136 ~~~~~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~~~---------~~~~~l~~~g~~~~~~~-v~~~ 205 (304)
T 4fk1_A 136 CPYCDGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNELSQ---------TIMDELSNKNIPVITES-IRTL 205 (304)
T ss_dssp CHHHHSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCCCH---------HHHHHHHTTTCCEECSC-EEEE
T ss_pred ccccchhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccccchh---------hhhhhhhccceeEeeee-EEEe
Confidence 2222333445778888888865 67888888889999999988765432 35667888999999874 7777
Q ss_pred EeCCCCcEEEEEeCCCCEEecCEEEEecC
Q 021871 276 EAGSDGRVAAVKLEDGSTIDADTVILLPY 304 (306)
Q Consensus 276 ~~~~~~~v~~v~~~~G~~i~~d~vv~a~g 304 (306)
.. +++++..|++.+|+++++|.+|+++|
T Consensus 206 ~~-~~~~~~~v~~~~g~~i~~~~~vi~~g 233 (304)
T 4fk1_A 206 QG-EGGYLKKVEFHSGLRIERAGGFIVPT 233 (304)
T ss_dssp ES-GGGCCCEEEETTSCEECCCEEEECCE
T ss_pred ec-CCCeeeeeeccccceeeecceeeeec
Confidence 74 56677789999999999998888765
No 70
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.93 E-value=2.2e-24 Score=196.95 Aligned_cols=228 Identities=20% Similarity=0.246 Sum_probs=161.0
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChh
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (306)
...+||+|||||++|+++|.+|++.|+ +|+++|+... |.+.... ....++.+...........+..
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~---~v~lie~~~G----------G~~~~~~-~~~~~~~~~~~~~~~l~~~l~~ 275 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGI---RTGLMGERFG----------GQVLDTV-DIENYISVPKTEGQKLAGALKA 275 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSTT----------GGGTTCS-CBCCBTTBSSBCHHHHHHHHHH
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCC---eEEEEECCCC----------Ccccccc-cccccCCCCCCCHHHHHHHHHH
Confidence 346899999999999999999999998 9999986421 1110000 0001111110000111234455
Q ss_pred HHhhcCeEEEeCCcEEEEeCC-----CCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCC---CCCEEEEccHHHHHHH
Q 021871 129 WYKEKGIEMIYQDPVTSIDIE-----KQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY---LPGVHYIRDVADADAL 200 (306)
Q Consensus 129 ~~~~~~v~~~~~~~v~~v~~~-----~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~ 200 (306)
.+++.+++++.+++|..++.+ ...+.+++|..+.||++|+|+|..+.. +.+|+.. ..++.++...
T Consensus 276 ~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~-~~ipG~~~~~~~~v~~~~~~------ 348 (521)
T 1hyu_A 276 HVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRN-MNVPGEDQYRTKGVTYCPHC------ 348 (521)
T ss_dssp HHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECC-CCCTTTTTTTTTTEECCTTC------
T ss_pred HHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCC-CCCCChhhhcCceEEEeecC------
Confidence 667789999999999999753 346788888889999999999988764 4455532 2334433211
Q ss_pred HHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHH-cCCEEEcCceEEEEEeCC
Q 021871 201 ISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQ-NGVKFVKGASIKNLEAGS 279 (306)
Q Consensus 201 ~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gv~i~~~~~v~~i~~~~ 279 (306)
......+++|+|||+|.+|+|+|..|+..+.+|+++.+.+.+.. + ..+.+.+++ .||++++++.|+++.. +
T Consensus 349 ~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~---~----~~l~~~l~~~~gV~v~~~~~v~~i~~-~ 420 (521)
T 1hyu_A 349 DGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA---D----QVLQDKVRSLKNVDIILNAQTTEVKG-D 420 (521)
T ss_dssp CGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS---C----HHHHHHHTTCTTEEEECSEEEEEEEE-C
T ss_pred chhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc---C----HHHHHHHhcCCCcEEEeCCEEEEEEc-C
Confidence 12234689999999999999999999999999999999987764 2 235566766 6999999999999986 4
Q ss_pred CCcEEEEEeCC---CC--EEecCEEEEecCC
Q 021871 280 DGRVAAVKLED---GS--TIDADTVILLPYD 305 (306)
Q Consensus 280 ~~~v~~v~~~~---G~--~i~~d~vv~a~g~ 305 (306)
++++.++.+.+ |+ .+++|.||+|+|.
T Consensus 421 ~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 451 (521)
T 1hyu_A 421 GSKVVGLEYRDRVSGDIHSVALAGIFVQIGL 451 (521)
T ss_dssp SSSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CCcEEEEEEEeCCCCceEEEEcCEEEECcCC
Confidence 55665666643 54 6899999999985
No 71
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=3e-25 Score=193.33 Aligned_cols=239 Identities=16% Similarity=0.175 Sum_probs=149.5
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccC-------CCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVG-------SGGE 123 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 123 (306)
++||+|||||++|+++|+.|+++|+ +|+|+|+.+..+-...................++++..... ....
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~---~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGL---SYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVL 79 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSC---CEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHH
Confidence 4799999999999999999999998 99999998764310000000000000000001111110000 0112
Q ss_pred cCChhHHhhcCeEEEeCCcEEEEeCCCCE---EEcCCCcEEecCcEEEeeCCCCc-cCCCCCCCC-CCCEEEE-ccHHHH
Q 021871 124 RQTPEWYKEKGIEMIYQDPVTSIDIEKQT---LITNSGKLLKYGSLIVATGCTAS-RFPEKIGGY-LPGVHYI-RDVADA 197 (306)
Q Consensus 124 ~~~~~~~~~~~v~~~~~~~v~~v~~~~~~---v~~~~g~~~~~~~lila~G~~~~-~~~~~~~~~-~~g~~~~-~~~~~~ 197 (306)
.++...+++.+++++++++|.+++.+... +.++++ .+.||+||+|+|.... ..|.+++.. ..+.... ..+.+
T Consensus 80 ~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~~~~~~- 157 (357)
T 4a9w_A 80 AYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGEAYTPEYQGLESFAGIQLHSAHYST- 157 (357)
T ss_dssp HHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEGGGCCC-
T ss_pred HHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEeccCCC-
Confidence 34445566789999999999999886654 777777 8999999999996433 135554422 2222221 11111
Q ss_pred HHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecC-Cccccccc-CHHHHHHHHHHHH---------------
Q 021871 198 DALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE-NHLLQRLF-TPSLAQRYEQLYQ--------------- 260 (306)
Q Consensus 198 ~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~-~~~~~~~~-~~~~~~~~~~~~~--------------- 260 (306)
.....+++++|+|+|.+|+|+|..|.+.+ +|+++.+. +.+.+... ...+.+.+.+.+.
T Consensus 158 ----~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (357)
T 4a9w_A 158 ----PAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREPDLPPGGF 232 (357)
T ss_dssp ----SGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC---------------------
T ss_pred ----hhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHHHHHhccccccCCCcccccc
Confidence 12235789999999999999999999998 69999888 45555422 2333333333322
Q ss_pred -------------HcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCCC
Q 021871 261 -------------QNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYDQ 306 (306)
Q Consensus 261 -------------~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~~ 306 (306)
+.|+ +.....+.+++.. ++.+.+|+++++|.||+|+|..
T Consensus 233 ~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~~------~v~~~~g~~i~~D~vi~a~G~~ 284 (357)
T 4a9w_A 233 GDIVMVPPVLDARARGV-LAAVPPPARFSPT------GMQWADGTERAFDAVIWCTGFR 284 (357)
T ss_dssp -CBCCCHHHHHHHHTTC-CCEECCCSEEETT------EEECTTSCEEECSEEEECCCBC
T ss_pred cCcccChhHHHHHhcCc-eEEecCcceEeCC------eeEECCCCEecCCEEEECCCcC
Confidence 3444 5556677777742 5888999999999999999963
No 72
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.92 E-value=8.8e-25 Score=198.36 Aligned_cols=242 Identities=18% Similarity=0.255 Sum_probs=159.0
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccc------cc--------------------cC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKG------YL--------------------FP 103 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~------~~--------------------~~ 103 (306)
..+||+|||||++|+++|.+|++.|+ +|+|+|+.+...+......+| ++ +.
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~---~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g 81 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGK---KVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYG 81 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCC---eEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcC
Confidence 45899999999999999999999998 999999843221111000111 00 00
Q ss_pred CCCCCCCCCCcccccC------CCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcCCC--cEEecCcEEEeeCCCCc
Q 021871 104 LDKKPARLPGFHTCVG------SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTAS 175 (306)
Q Consensus 104 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g--~~~~~~~lila~G~~~~ 175 (306)
..........+..... ......+...+++.++++..+ .+..++.....+...+| ..+.||+||+|||+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g-~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~ 160 (488)
T 3dgz_A 82 WEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNI-KASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPR 160 (488)
T ss_dssp CCCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECC-EEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEEC
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCC
Confidence 0000000011110000 000001222345578888754 55555555455666666 47999999999999887
Q ss_pred cCCCCCCCCCCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHH
Q 021871 176 RFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRY 255 (306)
Q Consensus 176 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 255 (306)
.++.+|+.... ..+++.+......+++++|||+|.+|+|+|..+.+.+.+|+++.+.. +++. +++.+.+.+
T Consensus 161 ~p~~i~G~~~~-------~~~~~~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~l~~-~d~~~~~~l 231 (488)
T 3dgz_A 161 YPTQVKGALEY-------GITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI-PLRG-FDQQMSSLV 231 (488)
T ss_dssp CCSSCBTHHHH-------CBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-SSTT-SCHHHHHHH
T ss_pred CCCCCCCcccc-------cCcHHHHHhhhhcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc-cccc-CCHHHHHHH
Confidence 43324442110 11334444434457899999999999999999999999999999874 4444 689999999
Q ss_pred HHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCC---CC--EEecCEEEEecCC
Q 021871 256 EQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED---GS--TIDADTVILLPYD 305 (306)
Q Consensus 256 ~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~---G~--~i~~d~vv~a~g~ 305 (306)
.+.++++||++++++.|.+++..+++.+ .+.+.+ |+ ++++|.||+|+|.
T Consensus 232 ~~~l~~~gv~~~~~~~v~~i~~~~~~~~-~v~~~~~~~g~~~~~~~D~vi~a~G~ 285 (488)
T 3dgz_A 232 TEHMESHGTQFLKGCVPSHIKKLPTNQL-QVTWEDHASGKEDTGTFDTVLWAIGR 285 (488)
T ss_dssp HHHHHHTTCEEEETEEEEEEEECTTSCE-EEEEEETTTTEEEEEEESEEEECSCE
T ss_pred HHHHHHCCCEEEeCCEEEEEEEcCCCcE-EEEEEeCCCCeeEEEECCEEEEcccC
Confidence 9999999999999999999986445543 354443 54 4789999999985
No 73
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.92 E-value=1.4e-24 Score=194.40 Aligned_cols=234 Identities=18% Similarity=0.175 Sum_probs=163.2
Q ss_pred CCcEEEEcCChHHHHHHHHHHH---cCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCCh
Q 021871 51 NREFVIVGGGNAAGYAARTFVE---HGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~---~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (306)
++||+|||||++|+++|.+|++ .++ +|+|+|+++.+.|.. .... ..... . .. ......+.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~---~Vtlie~~~~~~~~~-~~~~-~~~g~-~------~~-----~~~~~~l~ 66 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGH---EVTLISANDYFQFVP-SNPW-VGVGW-K------ER-----DDIAFPIR 66 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGS---EEEEECSSSEEECGG-GHHH-HHHTS-S------CH-----HHHEEECH
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcC---EEEEEeCCCCCcccC-Cccc-cccCc-c------CH-----HHHHHHHH
Confidence 5799999999999999999999 676 999999998754431 1100 00000 0 00 01124567
Q ss_pred hHHhhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCCC--CCEEEEccHHHHHHHHHhhh
Q 021871 128 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYL--PGVHYIRDVADADALISSLE 205 (306)
Q Consensus 128 ~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~ 205 (306)
..+++.+++++. .+|..++.+.+.+.++++..+.||+||+|+|+.+.. +.+|+... .....+....+...+.+.+.
T Consensus 67 ~~~~~~gv~~~~-~~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~~-~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~ 144 (437)
T 3sx6_A 67 HYVERKGIHFIA-QSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAF-ENVPGSDPHEGPVQSICTVDHAERAFAEYQ 144 (437)
T ss_dssp HHHHTTTCEEEC-SCEEEEETTTTEEEETTSCEEECSEEEECCCCEECG-GGSTTCSTTTSSEECCSSHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEE-eEEEEEEcCCCEEEECCCCEEECCEEEECCCCCcCc-ccCCCCCcccCcceecccccHHHHHHHHHH
Confidence 778889999974 599999999889999999889999999999998774 55565432 23334445555555443322
Q ss_pred ---cCCeEEEEcCCHHH------HHHH----HHHHhCCCc-----EEEEecCCccccccc--CHHHHHHHHHHHHHcCCE
Q 021871 206 ---KAKKVVVVGGGYIG------MEVA----AAAVGWKLD-----TTIIFPENHLLQRLF--TPSLAQRYEQLYQQNGVK 265 (306)
Q Consensus 206 ---~~~~v~viG~g~~a------~e~a----~~l~~~~~~-----v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~gv~ 265 (306)
.+.+++|||+|+.+ +|+| ..+.+.+.+ |+++.+.+.+..... .+.....+.+.++++||+
T Consensus 145 ~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~~~~~~~~~~~l~~~gI~ 224 (437)
T 3sx6_A 145 ALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIE 224 (437)
T ss_dssp HHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCCTTHHHHHHHHHHHTTCE
T ss_pred HHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcchHHHHHHHHHHHHCCCE
Confidence 25567899986653 7777 455566654 999999987633111 234778889999999999
Q ss_pred EEcCceEEEEEeCCCCcEEEEEeCC-----CCEEecCEEEEecCC
Q 021871 266 FVKGASIKNLEAGSDGRVAAVKLED-----GSTIDADTVILLPYD 305 (306)
Q Consensus 266 i~~~~~v~~i~~~~~~~v~~v~~~~-----G~~i~~d~vv~a~g~ 305 (306)
+++++.|++|+. ++........+ |+++++|.+++|+|+
T Consensus 225 ~~~~~~v~~v~~--~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 225 AYTNCKVTKVED--NKMYVTQVDEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp EECSEEEEEEET--TEEEEEEECTTSCEEEEEEEECSEEEEECCE
T ss_pred EEcCCEEEEEEC--CeEEEEecccCCccccceEEEEeEEEEcCCC
Confidence 999999999983 43322222233 457999999999874
No 74
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.92 E-value=2.9e-24 Score=193.39 Aligned_cols=233 Identities=17% Similarity=0.258 Sum_probs=159.1
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC--C-CCCccccc-c---------c--------cCCCCCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP--Y-ERPALTKG-Y---------L--------FPLDKKPA 109 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~--~-~~~~~~~~-~---------~--------~~~~~~~~ 109 (306)
++||+|||||++|+++|.+|++.|+ +|+|+|++. .+ + .....+.. + + +.......
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~---~V~lie~~~-~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~ 80 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGI---PTVLVEGQA-LGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASP 80 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTC---CEEEECSSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCC---EEEEEccCC-CCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCC
Confidence 4899999999999999999999998 999999943 21 0 00000000 0 0 00000000
Q ss_pred CCCCcccccC------CCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCC
Q 021871 110 RLPGFHTCVG------SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGG 183 (306)
Q Consensus 110 ~~~~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~ 183 (306)
...+..+.. .........++++.+++++.+..+. ++ .+.+.+++ ..+.||+||+|||+.+..+|.++.
T Consensus 81 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~-~~--~~~v~v~~-~~~~~d~lviATGs~p~~~~~~~~- 154 (458)
T 1lvl_A 81 -RLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKV-LD--GKQVEVDG-QRIQCEHLLLATGSSSVELPMLPL- 154 (458)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEE-EE--TTEEEETT-EEEECSEEEECCCEEECCBTTBCC-
T ss_pred -ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEE-cc--CCEEEEee-EEEEeCEEEEeCCCCCCCCCCCCc-
Confidence 000100000 0000012245667899998875443 44 45677765 679999999999998875442331
Q ss_pred CCCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcC
Q 021871 184 YLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNG 263 (306)
Q Consensus 184 ~~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 263 (306)
+ ..+ .+.....+....+++++|||+|.+|+|+|..+.+.+.+|+++.+.+.+++. +++.+.+.+.+.++++|
T Consensus 155 ~-~~v------~~~~~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~g 226 (458)
T 1lvl_A 155 G-GPV------ISSTEALAPKALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT-YDSELTAPVAESLKKLG 226 (458)
T ss_dssp B-TTE------ECHHHHTCCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHHT
T ss_pred c-CcE------ecHHHHhhhhccCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc-cCHHHHHHHHHHHHHCC
Confidence 1 122 133333332335789999999999999999999999999999999999884 78999999999999999
Q ss_pred CEEEcCceEEEEEeCCCCcEEEEEeCCC--CEEecCEEEEecCC
Q 021871 264 VKFVKGASIKNLEAGSDGRVAAVKLEDG--STIDADTVILLPYD 305 (306)
Q Consensus 264 v~i~~~~~v~~i~~~~~~~v~~v~~~~G--~~i~~d~vv~a~g~ 305 (306)
|+++++++|++++. ++ + .+...+| +++++|.||+|+|.
T Consensus 227 v~i~~~~~v~~i~~--~~-v-~v~~~~G~~~~i~~D~vv~a~G~ 266 (458)
T 1lvl_A 227 IALHLGHSVEGYEN--GC-L-LANDGKGGQLRLEADRVLVAVGR 266 (458)
T ss_dssp CEEETTCEEEEEET--TE-E-EEECSSSCCCEECCSCEEECCCE
T ss_pred CEEEECCEEEEEEe--CC-E-EEEECCCceEEEECCEEEECcCC
Confidence 99999999999984 33 3 4554456 58999999999985
No 75
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.92 E-value=1.6e-25 Score=203.82 Aligned_cols=239 Identities=19% Similarity=0.225 Sum_probs=161.2
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCcc------ccccccC--------------CCCCCCCC
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPAL------TKGYLFP--------------LDKKPARL 111 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~------~~~~~~~--------------~~~~~~~~ 111 (306)
|||+|||||++|+++|.+++++|. +|.|||+........... +.||+-+ .......+
T Consensus 43 YDviVIG~GpaG~~aA~~aa~~G~---kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi 119 (542)
T 4b1b_A 43 YDYVVIGGGPGGMASAKEAAAHGA---RVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGW 119 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTC---CEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC---eEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCc
Confidence 799999999999999999999998 999999865432211111 1111100 00000000
Q ss_pred --C----CcccccC------CCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcC----CCcEEecCcEEEeeCCCCc
Q 021871 112 --P----GFHTCVG------SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITN----SGKLLKYGSLIVATGCTAS 175 (306)
Q Consensus 112 --~----~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~----~g~~~~~~~lila~G~~~~ 175 (306)
. .+..+.. ..........+++.+++++.+ ...-++...-.+... +++.++++++|+|||+.|.
T Consensus 120 ~~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G-~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~P~ 198 (542)
T 4b1b_A 120 KFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYING-LAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRPH 198 (542)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECE-EEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEEEC
T ss_pred ccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEee-eEEEcCCCcceEeecccCCceEEEeeeeEEeccCCCCC
Confidence 0 0000000 000011222355678887754 333333332233322 3347999999999999998
Q ss_pred cCCCCCCCCCCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHH
Q 021871 176 RFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRY 255 (306)
Q Consensus 176 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 255 (306)
.+|.++.. .+ ...+++.+++....|++++|||+|++|+|+|..++..|.+||++.+. .+++. +++++...+
T Consensus 199 ~P~~~~~~-~~------~~~ts~~~l~l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~-~~L~~-~D~ei~~~l 269 (542)
T 4b1b_A 199 IPDDVEGA-KE------LSITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRS-IVLRG-FDQQCAVKV 269 (542)
T ss_dssp CCSSSBTH-HH------HCBCHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESS-CSSTT-SCHHHHHHH
T ss_pred CCCcccCC-Cc------cccCchhhhccccCCceEEEECCCHHHHHHHHHHHhcCCeEEEeccc-ccccc-cchhHHHHH
Confidence 54432211 00 02356666665667899999999999999999999999999999875 55665 799999999
Q ss_pred HHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 256 EQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 256 ~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
.+.++++||++++++.+.+++.. ++.+ .|.+.+++.+.+|.|++|+|.
T Consensus 270 ~~~l~~~gi~~~~~~~v~~~~~~-~~~~-~v~~~~~~~~~~D~vLvAvGR 317 (542)
T 4b1b_A 270 KLYMEEQGVMFKNGILPKKLTKM-DDKI-LVEFSDKTSELYDTVLYAIGR 317 (542)
T ss_dssp HHHHHHTTCEEEETCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECSCE
T ss_pred HHHHHhhcceeecceEEEEEEec-CCeE-EEEEcCCCeEEEEEEEEcccc
Confidence 99999999999999999999963 4444 588888889999999999985
No 76
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.92 E-value=2e-25 Score=210.26 Aligned_cols=245 Identities=18% Similarity=0.168 Sum_probs=167.7
Q ss_pred ccCCccCcccccccccee---eecccCCCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccc
Q 021871 25 HRIRHSSAKNFQRRGFVV---AYSSFANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYL 101 (306)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~ 101 (306)
....|..||...++.... ........++||+|||||++||++|+.|+++|+ +|+|+|+++..+.. +
T Consensus 362 ~~~~C~vnp~~g~e~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~La~~G~---~V~liE~~~~~GG~--------~ 430 (690)
T 3k30_A 362 SPIRCTQNPSMGEEWRRGWHPERIRAKESDARVLVVGAGPSGLEAARALGVRGY---DVVLAEAGRDLGGR--------V 430 (690)
T ss_dssp SCCCCSSCTTTTTTTTTCCCSSCCCCCSSCCEEEEECCSHHHHHHHHHHHHHTC---EEEEECSSSSSCTH--------H
T ss_pred CcccCCcCcccCcccccccCccccCcccccceEEEECCCHHHHHHHHHHHHCCC---eEEEEecCCCCCCE--------e
Confidence 356799999987775421 112223456899999999999999999999998 99999998754311 1
Q ss_pred cCCCCCCCCCCCcccccCCCCCcCChhHHhhc-CeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCcc----
Q 021871 102 FPLDKKPARLPGFHTCVGSGGERQTPEWYKEK-GIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASR---- 176 (306)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~---- 176 (306)
... ..+|++... .....++...+.+. ++++++++.+. ..++..+.||+||+|+|+.+..
T Consensus 431 ~~~----~~~p~~~~~--~~~~~~~~~~~~~~~gv~~~~~~~v~----------~~~~~~~~~d~lvlAtG~~~~~~~~~ 494 (690)
T 3k30_A 431 TQE----SALPGLSAW--GRVKEYREAVLAELPNVEIYRESPMT----------GDDIVEFGFEHVITATGATWRTDGVA 494 (690)
T ss_dssp HHH----HTSTTCGGG--GHHHHHHHHHHHTCTTEEEESSCCCC----------HHHHHHTTCCEEEECCCEEECSSCCS
T ss_pred eec----cCCCchhHH--HHHHHHHHHHHHHcCCCEEEECCeec----------HHHHhhcCCCEEEEcCCCcccccccc
Confidence 000 001111100 00012344455565 88888775542 1223457899999999988541
Q ss_pred ---CCCCCCCCCCCEEEEccHHHHHHHHHhhhcCCeEEEEc--CCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHH
Q 021871 177 ---FPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVG--GGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSL 251 (306)
Q Consensus 177 ---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~viG--~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~ 251 (306)
.|++++.+.+.+.. ..+.+......+++++||| +|.+|+|+|..|.+.+.+|+++.+.+.+.+...++..
T Consensus 495 ~~~~~~i~G~~~~~v~~-----~~~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~ 569 (690)
T 3k30_A 495 RFHTTALPIAEGMQVLG-----PDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFE 569 (690)
T ss_dssp SSCSSCCCBCTTSEEEC-----HHHHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGTC
T ss_pred ccCCCCCCCCCCCcEEc-----HHHHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccccchh
Confidence 34445543333221 1222222344577899999 9999999999999999999999999988776444566
Q ss_pred HHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEE---eCCCCEEecCEEEEecCC
Q 021871 252 AQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVK---LEDGSTIDADTVILLPYD 305 (306)
Q Consensus 252 ~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~---~~~G~~i~~d~vv~a~g~ 305 (306)
...+.+.++++||+++++++|++++. ++. .+. +.+++++++|.||+|+|.
T Consensus 570 ~~~l~~~l~~~GV~i~~~~~V~~i~~--~~~--~v~~~~~~~~~~i~aD~VV~A~G~ 622 (690)
T 3k30_A 570 VNRIQRRLIENGVARVTDHAVVAVGA--GGV--TVRDTYASIERELECDAVVMVTAR 622 (690)
T ss_dssp HHHHHHHHHHTTCEEEESEEEEEEET--TEE--EEEETTTCCEEEEECSEEEEESCE
T ss_pred HHHHHHHHHHCCCEEEcCcEEEEEEC--CeE--EEEEccCCeEEEEECCEEEECCCC
Confidence 77888999999999999999999984 332 233 234567999999999985
No 77
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.92 E-value=3e-24 Score=193.42 Aligned_cols=225 Identities=17% Similarity=0.205 Sum_probs=148.7
Q ss_pred CcEEEEcCChHHHHHHHHHHH---cCCCCCc---EEEeccCCCCC--CCCCcccc----c-----cccCC-----CCCCC
Q 021871 52 REFVIVGGGNAAGYAARTFVE---HGMADGR---LCIVSKEAYAP--YERPALTK----G-----YLFPL-----DKKPA 109 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~---~g~~~~~---V~vie~~~~~~--~~~~~~~~----~-----~~~~~-----~~~~~ 109 (306)
+||+|||||++||++|+.|++ .|+ + |+|+|+.+..+ +......+ + .++.. .....
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~---~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~ 79 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGA---EIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECL 79 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTC---CCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCC---CCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhc
Confidence 699999999999999999999 898 6 99999986543 11100000 0 00000 00000
Q ss_pred CCCCcccc-----------cCCCCCcCChhHHhhcCeE--EEeCCcEEEEeCCCC----EEEcCC---C--cEEecCcEE
Q 021871 110 RLPGFHTC-----------VGSGGERQTPEWYKEKGIE--MIYQDPVTSIDIEKQ----TLITNS---G--KLLKYGSLI 167 (306)
Q Consensus 110 ~~~~~~~~-----------~~~~~~~~~~~~~~~~~v~--~~~~~~v~~v~~~~~----~v~~~~---g--~~~~~~~li 167 (306)
.++.+... .......++..++++.++. ++++++|..++.... .|.+.+ + ..+.||+||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VV 159 (464)
T 2xve_A 80 EFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVV 159 (464)
T ss_dssp CBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEE
T ss_pred ccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEE
Confidence 01111000 0001112334445667877 888999999986543 666644 3 478999999
Q ss_pred EeeC--CCCccCCCCCCCC-CCCE-EEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccc
Q 021871 168 VATG--CTASRFPEKIGGY-LPGV-HYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL 243 (306)
Q Consensus 168 la~G--~~~~~~~~~~~~~-~~g~-~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~ 243 (306)
+|+| +.|+ .|.++|.+ .++. .+..++.+. ....+++|+|||+|.+|+|+|..|++.+.+|+++.+.+.++
T Consensus 160 vAtG~~s~p~-~p~ipG~~~~~g~~~hs~~~~~~-----~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~ 233 (464)
T 2xve_A 160 CCTGHFSTPY-VPEFEGFEKFGGRILHAHDFRDA-----LEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPM 233 (464)
T ss_dssp ECCCSSSSBC-CCCCBTTTTCCSEEEEGGGCCCG-----GGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCC
T ss_pred ECCCCCCCCc-cCCCCCcccCCceEEehhhhCCH-----hHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCC
Confidence 9999 5665 45666643 3442 222222211 12358999999999999999999999999999999988776
Q ss_pred ccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCCC
Q 021871 244 QRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYDQ 306 (306)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~~ 306 (306)
+..+ ..||+++ ..|++++. + +|.+.+|+++++|.||+|||..
T Consensus 234 ~~~~-------------~~~V~~~--~~V~~i~~--~----~V~~~dG~~i~~D~Vi~atG~~ 275 (464)
T 2xve_A 234 GYKW-------------PENWDER--PNLVRVDT--E----NAYFADGSSEKVDAIILCTGYI 275 (464)
T ss_dssp CCCC-------------CTTEEEC--SCEEEECS--S----EEEETTSCEEECSEEEECCCBC
T ss_pred CCCC-------------CCceEEc--CCeEEEeC--C----EEEECCCCEEeCCEEEECCCCC
Confidence 5422 2588887 67888873 2 4778899999999999999963
No 78
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.92 E-value=1.6e-24 Score=203.72 Aligned_cols=250 Identities=17% Similarity=0.172 Sum_probs=168.6
Q ss_pred cccccccCCC-CCccCCccCccccccccceeeecccCCCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCC
Q 021871 13 GLSLWCPQSP-SLHRIRHSSAKNFQRRGFVVAYSSFANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY 91 (306)
Q Consensus 13 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~ 91 (306)
.|+..|.... ......|..||...++..... .+...++||+|||||++|+++|..|+++|+ +|+|+|+++..+.
T Consensus 336 ~c~~~C~~~~~~~~~~~C~~np~~~~e~~~~~--~~~~~~~~vvIIGgG~AGl~aA~~l~~~g~---~V~lie~~~~~gg 410 (671)
T 1ps9_A 336 GCNQACLDQIFVGKVTSCLVNPRACHETKMPI--LPAVQKKNLAVVGAGPAGLAFAINAAARGH---QVTLFDAHSEIGG 410 (671)
T ss_dssp CCCTTTHHHHHTTCCCCCSSCTTTTCTTTSCC--CSCSSCCEEEEECCSHHHHHHHHHHHTTTC---EEEEEESSSSSCT
T ss_pred ccccccchhccCCCceEEEeCcccccccccCC--CCCCCCCeEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCCCCCC
Confidence 4555554322 233556999998777654332 123456899999999999999999999998 9999999876532
Q ss_pred CCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcCCCcEE-ecCcEEEee
Q 021871 92 ERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLL-KYGSLIVAT 170 (306)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~-~~~~lila~ 170 (306)
... . ... .+ ....+... ..++...+++.++++++++.+.. . .+ .||+||+||
T Consensus 411 ~~~-~-~~~-~~------~~~~~~~~-----~~~~~~~~~~~gv~~~~~~~v~~---~----------~~~~~d~lviAt 463 (671)
T 1ps9_A 411 QFN-I-AKQ-IP------GKEEFYET-----LRYYRRMIEVTGVTLKLNHTVTA---D----------QLQAFDETILAS 463 (671)
T ss_dssp THH-H-HTT-ST------TCTTHHHH-----HHHHHHHHHHHTCEEEESCCCCS---S----------SSCCSSEEEECC
T ss_pred eee-c-ccc-CC------CHHHHHHH-----HHHHHHHHHHcCCEEEeCcEecH---H----------HhhcCCEEEEcc
Confidence 210 0 000 00 00011110 12344556778999988876531 1 24 899999999
Q ss_pred CCCCccCCCCCCCCCCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCC-------------------
Q 021871 171 GCTASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKL------------------- 231 (306)
Q Consensus 171 G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~------------------- 231 (306)
|+.+.. |++++.+.+++... .+.+......+++|+|||+|.+|+|+|..|++.+.
T Consensus 464 G~~p~~-~~i~G~~~~~v~~~-----~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~ 537 (671)
T 1ps9_A 464 GIVPRT-PPIDGIDHPKVLSY-----LDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSL 537 (671)
T ss_dssp CEEECC-CCCBTTTSTTEEEH-----HHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTC
T ss_pred CCCcCC-CCCCCCCCCcEeeH-----HHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccc
Confidence 998874 55666554555432 12222223457899999999999999999987663
Q ss_pred ------------------cEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCC--
Q 021871 232 ------------------DTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG-- 291 (306)
Q Consensus 232 ------------------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G-- 291 (306)
+|+++.+.+..+...+++.....+.+.++++||+++++++|++++ +++. .++ .+|
T Consensus 538 ~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~--~~~v--~~~-~~G~~ 612 (671)
T 1ps9_A 538 QQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKID--DDGL--HVV-INGET 612 (671)
T ss_dssp CSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEE--TTEE--EEE-ETTEE
T ss_pred cccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEe--CCeE--EEe-cCCeE
Confidence 456666666555444566666777888999999999999999998 3432 233 567
Q ss_pred CEEecCEEEEecCC
Q 021871 292 STIDADTVILLPYD 305 (306)
Q Consensus 292 ~~i~~d~vv~a~g~ 305 (306)
+++++|.||+|+|.
T Consensus 613 ~~i~~D~Vi~a~G~ 626 (671)
T 1ps9_A 613 QVLAVDNVVICAGQ 626 (671)
T ss_dssp EEECCSEEEECCCE
T ss_pred EEEeCCEEEECCCc
Confidence 57999999999985
No 79
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.92 E-value=1.6e-24 Score=193.49 Aligned_cols=231 Identities=21% Similarity=0.237 Sum_probs=155.7
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHHh
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 131 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (306)
++|||||||+||+++|++|++.+ ++.+|+|||+++.+.|. +.++. ..... .... +....+...++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~-~~~~VtlI~~~~~~~~~-p~l~~-v~~g~-~~~~-----------~i~~~~~~~~~ 67 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLM-PDLKITLISDRPYFGFT-PAFPH-LAMGW-RKFE-----------DISVPLAPLLP 67 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC-TTCEEEEECSSSEEECG-GGHHH-HHHTC-SCGG-----------GSEEESTTTGG
T ss_pred CcEEEECCCHHHHHHHHHHhccC-cCCeEEEEcCCCCCccC-ccHHH-HhcCC-CCHH-----------HhhhcHHHHHH
Confidence 68999999999999999999987 46799999999876553 22211 00000 0000 11234556677
Q ss_pred hcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCCCCCEEEEccHHHHHHHHHhh---hcCC
Q 021871 132 EKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISSL---EKAK 208 (306)
Q Consensus 132 ~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~ 208 (306)
+.+++++.+ +|+++|++.++|.+++|+.+.||+||+|||+.+. + .+++.. +....++.+.+...+.+.+ ....
T Consensus 68 ~~gv~~i~~-~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~-~-~i~G~~-e~~~~~~~~~~a~~~~~~l~~~~~~~ 143 (430)
T 3hyw_A 68 KFNIEFINE-KAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV-F-GAEGQE-ENSTSICTAEHALETQKKLQELYANP 143 (430)
T ss_dssp GGTEEEECS-CEEEEETTTTEEEETTCCEEECSEEEECCCCEEE-C-CSBTHH-HHSCCCSSHHHHHHHHHHHHHHHHSC
T ss_pred HCCcEEEEe-EEEEEECCCCEEEECCCCEEECCEEEEeCCCCcc-C-CccCcc-cCcCCcccHHHHHHHHHHHHhhccCC
Confidence 889999865 8999999999999999999999999999998754 2 233311 1223344455555544433 2344
Q ss_pred eEEEEcCCH------HHHHHHH----HHHhCC----CcEEEEecCCcccc--cccCHHHHHHHHHHHHHcCCEEEcCceE
Q 021871 209 KVVVVGGGY------IGMEVAA----AAVGWK----LDTTIIFPENHLLQ--RLFTPSLAQRYEQLYQQNGVKFVKGASI 272 (306)
Q Consensus 209 ~v~viG~g~------~a~e~a~----~l~~~~----~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~gv~i~~~~~v 272 (306)
.++|+|++. .+.|++. .+.+.+ .+++++...+.+.. ....+...+.+.+.++++||++++++.|
T Consensus 144 ~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~v 223 (430)
T 3hyw_A 144 GPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAV 223 (430)
T ss_dssp CCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEE
T ss_pred ceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEeCceE
Confidence 555666542 2334443 344443 46788877765532 1134566778889999999999999999
Q ss_pred EEEEeCCCCcEEEEEeCCC--CEEecCEEEEecCC
Q 021871 273 KNLEAGSDGRVAAVKLEDG--STIDADTVILLPYD 305 (306)
Q Consensus 273 ~~i~~~~~~~v~~v~~~~G--~~i~~d~vv~a~g~ 305 (306)
++++. ++. .++..+| +++++|.+||++|+
T Consensus 224 ~~v~~--~~~--~~~~~~g~~~~i~~d~vi~~~G~ 254 (430)
T 3hyw_A 224 KAIEP--DKV--IYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp EEECS--SEE--EEECTTSCEEEEECSEEEEECEE
T ss_pred EEEeC--Cce--EEEeeCCCceEeecceEEEeccC
Confidence 99983 433 2444444 47999999999985
No 80
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.92 E-value=7.8e-26 Score=205.29 Aligned_cols=235 Identities=17% Similarity=0.184 Sum_probs=154.4
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccC-----C---CCCCCCCCCc--c----c
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFP-----L---DKKPARLPGF--H----T 116 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~~~--~----~ 116 (306)
.+||+|||||++|+++|++|++.|+ +|+|+|++..-+ ...+.|++.. . ......++.| . .
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~---~V~liE~~~~GG---tc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~ 81 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTD---KVVLIEGGAYGT---TCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRIS 81 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCS---CEEEEESSCSSC---HHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC---cEEEEeCCCCCC---cccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCc
Confidence 4799999999999999999999998 999999975211 0000000000 0 0000000000 0 0
Q ss_pred ccCCCCCcCChhH-----------Hhhc-CeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCC
Q 021871 117 CVGSGGERQTPEW-----------YKEK-GIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY 184 (306)
Q Consensus 117 ~~~~~~~~~~~~~-----------~~~~-~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~ 184 (306)
........++... +... ++++..+ ...-. +.+.+.+.++..+.||++|+|||+.+.. |++++..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g-~a~~~--~~~~v~~~~~~~~~~d~lViATGs~p~~-p~~~~~~ 157 (492)
T 3ic9_A 82 VNGKAVMKRIQTERDRFVGFVVESVESFDEQDKIRG-FAKFL--DEHTLQVDDHSQVIAKRIVIATGSRPNY-PEFLAAA 157 (492)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEES-CEEEE--ETTEEEETTTEEEEEEEEEECCCEECCC-CHHHHTT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEE-EEEEe--cCCEEEEcCCcEEEeCEEEEccCCCCcC-CCCCCcc
Confidence 0000000011111 1111 2223322 22112 3457777778899999999999998874 4433322
Q ss_pred CCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCC
Q 021871 185 LPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGV 264 (306)
Q Consensus 185 ~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 264 (306)
.+.+ .+++.+......+++++|||+|.+|+|+|..+.+.+.+|+++.+.+++++. +++.+.+.+.+.++++ |
T Consensus 158 ~~~v------~t~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l~~~-V 229 (492)
T 3ic9_A 158 GSRL------LTNDNLFELNDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL-QDEEMKRYAEKTFNEE-F 229 (492)
T ss_dssp GGGE------ECHHHHTTCSSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC-CCHHHHHHHHHHHHTT-S
T ss_pred CCcE------EcHHHHhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-CCHHHHHHHHHHHhhC-c
Confidence 2222 234444444446899999999999999999999999999999999998875 7899999999999988 9
Q ss_pred EEEcCceEEEEEeCCCCcEEEEEeC--CC--CEEecCEEEEecCC
Q 021871 265 KFVKGASIKNLEAGSDGRVAAVKLE--DG--STIDADTVILLPYD 305 (306)
Q Consensus 265 ~i~~~~~v~~i~~~~~~~v~~v~~~--~G--~~i~~d~vv~a~g~ 305 (306)
++++++.|++++.+ ++.+ .+.+. +| +++++|.||+|+|.
T Consensus 230 ~i~~~~~v~~i~~~-~~~v-~v~~~~~~G~~~~i~~D~Vi~a~G~ 272 (492)
T 3ic9_A 230 YFDAKARVISTIEK-EDAV-EVIYFDKSGQKTTESFQYVLAATGR 272 (492)
T ss_dssp EEETTCEEEEEEEC-SSSE-EEEEECTTCCEEEEEESEEEECSCC
T ss_pred EEEECCEEEEEEEc-CCEE-EEEEEeCCCceEEEECCEEEEeeCC
Confidence 99999999999974 4444 35553 67 57999999999996
No 81
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.91 E-value=2.1e-23 Score=193.86 Aligned_cols=243 Identities=19% Similarity=0.254 Sum_probs=153.4
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccc------cc--------------------c
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKG------YL--------------------F 102 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~------~~--------------------~ 102 (306)
...+||+|||||+|||++|.+|+++|+ +|+|+|+............+| ++ +
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~---~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~ 181 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGA---KTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHF 181 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTC---CEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccEEEECCCccHHHHHHHHHhCCC---eEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhC
Confidence 346899999999999999999999998 999999742211000000111 00 0
Q ss_pred CCCCCCC-CCCCcccccCC------CCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcCCC--cEEecCcEEEeeCCC
Q 021871 103 PLDKKPA-RLPGFHTCVGS------GGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCT 173 (306)
Q Consensus 103 ~~~~~~~-~~~~~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g--~~~~~~~lila~G~~ 173 (306)
....... ....+..+... .........+...+++++.+ ....++.....+...+| ..+.||+||+|||+.
T Consensus 182 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~-~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtGs~ 260 (598)
T 2x8g_A 182 GWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNA-KGRLISPHEVQITDKNQKVSTITGNKIILATGER 260 (598)
T ss_dssp TCCCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCEEEEEEEEEEECCCEE
T ss_pred CccccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEE-EEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCCCC
Confidence 0000000 00000000000 00000111234567887754 45555554444555556 468999999999998
Q ss_pred CccCCCCCCCCCCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHH
Q 021871 174 ASRFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQ 253 (306)
Q Consensus 174 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~ 253 (306)
+.. |+ ++|...+ ..+.+.+.+....+++++|||+|.+|+|+|..+++.+.+|+++.+. .+++. +++.+.+
T Consensus 261 p~~-p~-----i~G~~~~--~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~~-~d~~~~~ 330 (598)
T 2x8g_A 261 PKY-PE-----IPGAVEY--GITSDDLFSLPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILLRG-FDQQMAE 330 (598)
T ss_dssp ECC-CS-----STTHHHH--CEEHHHHTTCSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTT-SCHHHHH
T ss_pred CCC-CC-----CCCcccc--eEcHHHHhhCccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCcCc-CCHHHHH
Confidence 774 44 3442100 0123333332345789999999999999999999999999999998 55554 6889999
Q ss_pred HHHHHHHHcCCEEEcCceEEEEEeC------C--CCcE-EEEEeCCCCEEe--cCEEEEecCC
Q 021871 254 RYEQLYQQNGVKFVKGASIKNLEAG------S--DGRV-AAVKLEDGSTID--ADTVILLPYD 305 (306)
Q Consensus 254 ~~~~~~~~~gv~i~~~~~v~~i~~~------~--~~~v-~~v~~~~G~~i~--~d~vv~a~g~ 305 (306)
.+.+.+++.||++++++.+.+++.. + ++.+ ..+...+|+.++ +|.||+|+|.
T Consensus 331 ~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~ 393 (598)
T 2x8g_A 331 KVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGR 393 (598)
T ss_dssp HHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCE
T ss_pred HHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCC
Confidence 9999999999999999988888531 1 1333 233456787665 9999999985
No 82
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.91 E-value=6.3e-24 Score=189.83 Aligned_cols=227 Identities=21% Similarity=0.216 Sum_probs=154.9
Q ss_pred CCcEEEEcCChHHHHHHHHHHH--cCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChh
Q 021871 51 NREFVIVGGGNAAGYAARTFVE--HGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~--~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (306)
++||+|||||++|+++|++|++ .++ +|+|+|+++.+.|.. .... ..... ... ......+..
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~---~Vtlie~~~~~~~~~-~~~~-~~~g~-~~~-----------~~~~~~~~~ 64 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDL---KITLISDRPYFGFTP-AFPH-LAMGW-RKF-----------EDISVPLAP 64 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTC---EEEEECSSSEEECGG-GHHH-HHHTC-SCG-----------GGSEEESTT
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCC---eEEEECCCCCCCcCC-Ccch-hccCc-cCH-----------HHHHHHHHH
Confidence 4799999999999999999999 555 999999998765431 1110 00000 000 011244556
Q ss_pred HHhhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCCCCC-EEEEccHHHHHHHHHh---h
Q 021871 129 WYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPG-VHYIRDVADADALISS---L 204 (306)
Q Consensus 129 ~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~---~ 204 (306)
.+++.+++++.. ++..++.+.+.+.++++..+.||++|+|+|+.+.. |.. ...+ ...+....+...+.+. +
T Consensus 65 ~~~~~gv~~~~~-~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~~-pg~---~~~g~~~~~~~~~~a~~~~~~~~~~ 139 (430)
T 3h28_A 65 LLPKFNIEFINE-KAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVF-GAE---GQEENSTSICTAEHALETQKKLQEL 139 (430)
T ss_dssp TGGGGTEEEECS-CEEEEETTTTEEEETTCCEEECSEEEECCCCEEEC-CSB---THHHHSCCCSSHHHHHHHHHHHHHH
T ss_pred HHHhcCCEEEEE-EEEEEECCCCEEEECCCcEEECCEEEEcCCccccc-CCC---CCcCCccCcCCHHHHHHHHHHHHHH
Confidence 677789999864 99999998889999998889999999999998653 311 0111 1122234444433322 2
Q ss_pred hcCCeEEEEcCCHHH------HHHHHH----HHhCC----CcEEEEecCCcccccc--cCHHHHHHHHHHHHHcCCEEEc
Q 021871 205 EKAKKVVVVGGGYIG------MEVAAA----AVGWK----LDTTIIFPENHLLQRL--FTPSLAQRYEQLYQQNGVKFVK 268 (306)
Q Consensus 205 ~~~~~v~viG~g~~a------~e~a~~----l~~~~----~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~gv~i~~ 268 (306)
...++++|||+|+++ +|+|.. +.+.+ .+|+++.+.+.+.... ..+...+.+.+.++++||++++
T Consensus 140 ~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~~~~~~~l~~~l~~~GV~i~~ 219 (430)
T 3h28_A 140 YANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIA 219 (430)
T ss_dssp HHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEEC
T ss_pred HhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCccccccccCcchHHHHHHHHHHHHCCCEEEe
Confidence 234567889987654 777754 44555 4799999988763210 1234778888999999999999
Q ss_pred CceEEEEEeCCCCcEEEEEeCC----CCEEecCEEEEecCC
Q 021871 269 GASIKNLEAGSDGRVAAVKLED----GSTIDADTVILLPYD 305 (306)
Q Consensus 269 ~~~v~~i~~~~~~~v~~v~~~~----G~~i~~d~vv~a~g~ 305 (306)
++.|++|+. ++ +.+++ |+++++|.+|+|+|.
T Consensus 220 ~~~v~~v~~--~~----v~~~~~~~~g~~i~~D~vv~a~G~ 254 (430)
T 3h28_A 220 NVAVKAIEP--DK----VIYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp SCEEEEECS--SE----EEEECTTSCEEEEECSEEEEECEE
T ss_pred CCEEEEEeC--Ce----EEEEecCCCceEEeeeEEEECCCC
Confidence 999999984 32 33444 678999999999874
No 83
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.90 E-value=1.1e-23 Score=188.62 Aligned_cols=223 Identities=19% Similarity=0.182 Sum_probs=149.5
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChh
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (306)
...+||+|||||++||++|++|++.|+ +|+|+|+.+..+ |.+.. .-+...++ .. .......
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~---~V~v~e~~~~~G--------G~l~~-gip~~~~~--~~-----~~~~~~~ 180 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGY---EVHVYDRYDRMG--------GLLVY-GIPGFKLE--KS-----VVERRVK 180 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTC---CEEEECSSSSCS--------THHHH-TSCTTTSC--HH-----HHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC---eEEEEeccCCCC--------Ceeee-cCCCccCC--HH-----HHHHHHH
Confidence 356899999999999999999999998 999999986542 11110 00001111 00 1123456
Q ss_pred HHhhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCCCCCEEEEccHHHHHHHH--H----
Q 021871 129 WYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALI--S---- 202 (306)
Q Consensus 129 ~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~---- 202 (306)
++++.++++++++.+. ..+.++++ .+.||+|++|+|+.....+.+++.+.+++....++....... .
T Consensus 181 ~l~~~gv~~~~~~~v~------~~v~~~~~-~~~~d~vvlAtG~~~~~~~~ipG~~~~gv~~a~~~l~~~~~~~~~~~~~ 253 (456)
T 2vdc_G 181 LLADAGVIYHPNFEVG------RDASLPEL-RRKHVAVLVATGVYKARDIKAPGSGLGNIVAALDYLTTSNKVSLGDTVE 253 (456)
T ss_dssp HHHHTTCEEETTCCBT------TTBCHHHH-HSSCSEEEECCCCCEECCTTCSCCTTTTEEEHHHHHHHHHHHHCTTTCS
T ss_pred HHHHCCcEEEeCCEec------cEEEhhHh-HhhCCEEEEecCCCCCCCCCCCCCcCCCcEEHHHHHHHhhhhhcccccc
Confidence 6778899999886642 12222222 357999999999974435667777777876543333221111 0
Q ss_pred ------hhhcCCeEEEEcCCHHHHHHHHHHHhCCC-cEEEEecCCcc-cccccCHHHHHHHHHHHHHcCCEEEcCceEEE
Q 021871 203 ------SLEKAKKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENHL-LQRLFTPSLAQRYEQLYQQNGVKFVKGASIKN 274 (306)
Q Consensus 203 ------~~~~~~~v~viG~g~~a~e~a~~l~~~~~-~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~ 274 (306)
....+++|+|||+|.+|+|+|..+.+.+. +|++++|.+.. ++. .+. . .+.+++.||++++++.+++
T Consensus 254 ~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~--~~~---e-~~~~~~~Gv~~~~~~~~~~ 327 (456)
T 2vdc_G 254 AYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPG--SQR---E-VAHAEEEGVEFIWQAAPEG 327 (456)
T ss_dssp SCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSS--CHH---H-HHHHHHTTCEEECCSSSCC
T ss_pred cccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCC--CHH---H-HHHHHHCCCEEEeCCCceE
Confidence 01357899999999999999999999886 59999998875 443 221 1 3457788999999999998
Q ss_pred EEeCCCCcEEEEEe---------C---------CC--CEEecCEEEEecCC
Q 021871 275 LEAGSDGRVAAVKL---------E---------DG--STIDADTVILLPYD 305 (306)
Q Consensus 275 i~~~~~~~v~~v~~---------~---------~G--~~i~~d~vv~a~g~ 305 (306)
+.. ++++.+|++ . +| .++++|.||+|+|+
T Consensus 328 i~~--~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~ 376 (456)
T 2vdc_G 328 FTG--DTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGF 376 (456)
T ss_dssp EEE--EEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCE
T ss_pred EeC--CCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCC
Confidence 873 343322222 1 23 36899999999985
No 84
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.90 E-value=6.3e-24 Score=190.55 Aligned_cols=229 Identities=17% Similarity=0.165 Sum_probs=148.4
Q ss_pred CCCcEEEEcCChHHHHHHHHHHH-c------CCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVE-H------GMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGG 122 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~-~------g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (306)
+++||+|||||++|+++|..|++ . +. +|+|+|+.+.. +... ..+. .+ +.+..+. .
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~---~V~lie~~~~~-gg~~--~~gv-~p------~~~~~~~-----~ 63 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDM---AVDMLEMLPTP-WGLV--RSGV-AP------DHPKIKS-----I 63 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCE---EEEEEESSSSC-STHH--HHTS-CT------TCTGGGG-----G
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCC---eEEEEecCCCC-CCcc--cccc-CC------CCCCHHH-----H
Confidence 45799999999999999999999 7 76 99999998653 2110 1111 01 0011111 1
Q ss_pred CcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCCCCCEEEEccHHHHH----
Q 021871 123 ERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADAD---- 198 (306)
Q Consensus 123 ~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~~~g~~~~~~~~~~~---- 198 (306)
..++..++++.+++++.+..+ ...+.++++ .+.||+||+|||+.+...+.+|+.+.+++....++....
T Consensus 64 ~~~~~~~~~~~~v~~~~~v~v------~~~v~~~~~-~~~~d~lViAtG~~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~ 136 (456)
T 1lqt_A 64 SKQFEKTAEDPRFRFFGNVVV------GEHVQPGEL-SERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHP 136 (456)
T ss_dssp HHHHHHHHTSTTEEEEESCCB------TTTBCHHHH-HHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCG
T ss_pred HHHHHHHHhcCCCEEEeeEEE------CCEEEECCC-eEeCCEEEEeeCCCCCCCCCCCCCCCCCcEEHHHHHhhhhcCc
Confidence 234455666788998877543 223444444 479999999999974334567776677766543221100
Q ss_pred HHHHhh--hcCCeEEEEcCCHHHHHHHHHHHhC--------------------C-CcEEEEecCCcccccccCH------
Q 021871 199 ALISSL--EKAKKVVVVGGGYIGMEVAAAAVGW--------------------K-LDTTIIFPENHLLQRLFTP------ 249 (306)
Q Consensus 199 ~~~~~~--~~~~~v~viG~g~~a~e~a~~l~~~--------------------~-~~v~~~~~~~~~~~~~~~~------ 249 (306)
.+.... ..+++++|||+|++|+|+|..|++. + .+|+++.|.+.+...+.+.
T Consensus 137 d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~ 216 (456)
T 1lqt_A 137 HFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELA 216 (456)
T ss_dssp GGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGG
T ss_pred ccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhh
Confidence 000011 1478999999999999999999974 3 5899999987654321110
Q ss_pred ------------H------------------HHHHHHHHHHH------cCCEEEcCceEEEEEeCCCCcEEEEEeC----
Q 021871 250 ------------S------------------LAQRYEQLYQQ------NGVKFVKGASIKNLEAGSDGRVAAVKLE---- 289 (306)
Q Consensus 250 ------------~------------------~~~~~~~~~~~------~gv~i~~~~~v~~i~~~~~~~v~~v~~~---- 289 (306)
+ +.+.+.+.+++ +||++++++.+++|.. ++.+.+|++.
T Consensus 217 ~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~--~~~v~~v~~~~~~~ 294 (456)
T 1lqt_A 217 DLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKG--KRKVERIVLGRNEL 294 (456)
T ss_dssp GCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEEC--SSSCCEEEEEEEEE
T ss_pred cCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEec--CCcEeEEEEEEEEe
Confidence 1 12344444555 7999999999999984 3444345443
Q ss_pred ------------CC--CEEecCEEEEecCC
Q 021871 290 ------------DG--STIDADTVILLPYD 305 (306)
Q Consensus 290 ------------~G--~~i~~d~vv~a~g~ 305 (306)
+| +++++|.||+|+|.
T Consensus 295 ~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~ 324 (456)
T 1lqt_A 295 VSDGSGRVAAKDTGEREELPAQLVVRSVGY 324 (456)
T ss_dssp EECSSSSEEEEEEEEEEEEECSEEEECSCE
T ss_pred cCCCcccccccCCCceEEEEcCEEEEcccc
Confidence 34 46999999999985
No 85
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.90 E-value=7.3e-24 Score=190.30 Aligned_cols=230 Identities=16% Similarity=0.173 Sum_probs=151.4
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
.++||+|||||++|+++|..|++.| ++.+|+|+|+.+.. +. .+.... .|.+... ......+..+
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g-~~~~V~vie~~~~~-gg-------~~~~g~-----~p~~~~~--~~~~~~~~~~ 68 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHH-SRAHVDIYEKQLVP-FG-------LVRFGV-----APDHPEV--KNVINTFTQT 68 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHC-SSCEEEEECSSSSS-CT-------HHHHTS-----CTTCGGG--GGHHHHHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcC-CCCCEEEEeCCCcC-Cc-------eeeccc-----CCCCccH--HHHHHHHHHH
Confidence 4579999999999999999999998 23499999998654 21 111000 0111100 0012344566
Q ss_pred HhhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCCCCCEEEEccHHHHHHHHHh------
Q 021871 130 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISS------ 203 (306)
Q Consensus 130 ~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~------ 203 (306)
+++.+++++.+..+. ..+.+.+ ..+.||+||+|||+.+...|++|+.+.+++....++. .+.+.
T Consensus 69 ~~~~gv~~~~~~~v~------~~V~~~~-~~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~~~~~~---~~~~~~~d~~~ 138 (460)
T 1cjc_A 69 ARSDRCAFYGNVEVG------RDVTVQE-LQDAYHAVVLSYGAEDHQALDIPGEELPGVFSARAFV---GWYNGLPENRE 138 (460)
T ss_dssp HTSTTEEEEBSCCBT------TTBCHHH-HHHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHH---HHHTTCGGGTT
T ss_pred HHhCCcEEEeeeEEe------eEEEecc-ceEEcCEEEEecCcCCCCCCCCCCCCCCcEEEHHHHH---HHhhcCccccc
Confidence 677899998876551 2233333 2468999999999996445677887777876654331 11110
Q ss_pred ---hhcCCeEEEEcCCHHHHHHHHHHH--------------------hCCC-cEEEEecCCccc--------------cc
Q 021871 204 ---LEKAKKVVVVGGGYIGMEVAAAAV--------------------GWKL-DTTIIFPENHLL--------------QR 245 (306)
Q Consensus 204 ---~~~~~~v~viG~g~~a~e~a~~l~--------------------~~~~-~v~~~~~~~~~~--------------~~ 245 (306)
...+++++|||+|++|+|+|..|. ..+. +|+++.|.+.+. +.
T Consensus 139 ~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~ 218 (460)
T 1cjc_A 139 LAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPG 218 (460)
T ss_dssp CCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTT
T ss_pred cccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCC
Confidence 114789999999999999999999 4565 799999987642 10
Q ss_pred --------cc----------CH---HHHHHHHHHHHH--------------cCCEEEcCceEEEEEeCCCC-cEEEEEeC
Q 021871 246 --------LF----------TP---SLAQRYEQLYQQ--------------NGVKFVKGASIKNLEAGSDG-RVAAVKLE 289 (306)
Q Consensus 246 --------~~----------~~---~~~~~~~~~~~~--------------~gv~i~~~~~v~~i~~~~~~-~v~~v~~~ 289 (306)
.+ +. .+.+.+.+.+++ +||++++++.+++|..++++ ++.+|++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~ 298 (460)
T 1cjc_A 219 TRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLA 298 (460)
T ss_dssp EEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEE
T ss_pred ceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEE
Confidence 00 01 023344445555 89999999999999864335 55555543
Q ss_pred ---------------CC--CEEecCEEEEecCC
Q 021871 290 ---------------DG--STIDADTVILLPYD 305 (306)
Q Consensus 290 ---------------~G--~~i~~d~vv~a~g~ 305 (306)
+| +.+++|.||+|+|.
T Consensus 299 ~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~ 331 (460)
T 1cjc_A 299 VTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGY 331 (460)
T ss_dssp EEEEESSGGGCEEEEEEEEEEEECSEEEECCCE
T ss_pred EEEEccccCCCcccCCCceEEEEcCEEEECCCC
Confidence 34 47999999999985
No 86
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.89 E-value=5.7e-23 Score=182.10 Aligned_cols=235 Identities=17% Similarity=0.166 Sum_probs=157.8
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.++|||||||+||+++|.+|++.+. +.+|+|||+++.+.+. +.... ..... .... . .....+.+
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~-~~~Vtlie~~~~~~~~-p~~~~-v~~g~-~~~~------~------~~~~~~~~ 65 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADP-SIEVTLIEPNETYYTC-YMSNE-VIGGD-RELA------S------LRVGYDGL 65 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCT-TSEEEEECSCSSEECS-TTHHH-HHHTS-SCGG------G------GEECSHHH
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCc-CCeEEEEeCCCCCCCc-cCHHH-HhcCC-CCHH------H------HhhCHHHH
Confidence 3689999999999999999999874 6799999998765333 21110 11100 0000 0 11223446
Q ss_pred hhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCC----CCCEEEEccHHHHHHHHHhhh-
Q 021871 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGY----LPGVHYIRDVADADALISSLE- 205 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~- 205 (306)
.+.+++++.+ +|..+|++.+.+.+.++..+.||+||+|+|+.+.. +.+++.. ......++...+...+.+.+.
T Consensus 66 ~~~gv~~i~~-~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~~-~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~ 143 (401)
T 3vrd_B 66 RAHGIQVVHD-SALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLLY-DKIEGYSEALAAKLPHAWKAGEQTALLRRQLES 143 (401)
T ss_dssp HHTTCEEECS-CEEEEETTTTEEEETTSCEEECSEEEECCCEEECG-GGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHH
T ss_pred HHCCCEEEEe-EEEEEEccCcEEEecccceeecceeeeccCCcccc-CCccCchhhcccCccceeccHHHHHHHHHHHHh
Confidence 6789998865 89999999999999999999999999999998764 4444421 112223333445555444433
Q ss_pred --cCCeEEEEcCC------H----HHHHHHHHHHhC--CCcEEEEecCCccccc-ccCHHHHHHHHHHHHHcCCEEEcCc
Q 021871 206 --KAKKVVVVGGG------Y----IGMEVAAAAVGW--KLDTTIIFPENHLLQR-LFTPSLAQRYEQLYQQNGVKFVKGA 270 (306)
Q Consensus 206 --~~~~v~viG~g------~----~a~e~a~~l~~~--~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~i~~~~ 270 (306)
.+..+++.++. . .+.+++..+... ..+|+++.+.+.+... .+++.+.+.+.+.++++||++++++
T Consensus 144 ~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~ 223 (401)
T 3vrd_B 144 MDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGP 223 (401)
T ss_dssp SCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTT
T ss_pred cccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEcccccccccccccHHHHHHHHHHHHhcCcEEEeCc
Confidence 23344333221 1 334555555544 3678999888776431 2455566666667788999999999
Q ss_pred eEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 271 SIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 271 ~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
.+..++.+.+.. .+++++|+++++|.+++++|+
T Consensus 224 ~v~~v~~~~~~~--~v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 224 DAAVVKTDTEAM--TVETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp TTCEEEEETTTT--EEEETTSCEEECSEEEECCCE
T ss_pred eEEEEEecccce--EEEcCCCcEEEeeEEEEecCc
Confidence 999988644443 588999999999999999986
No 87
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.89 E-value=1.2e-22 Score=182.48 Aligned_cols=229 Identities=12% Similarity=0.095 Sum_probs=144.5
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC--CCCCcccc---------------------------c
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP--YERPALTK---------------------------G 99 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~--~~~~~~~~---------------------------~ 99 (306)
++.+||+|||||++||++|+.|++.|. ..+|+|+|+.+..+ +....... .
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~-~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~ 82 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKA-FDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPS 82 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTC-CSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCC-CCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccC
Confidence 346899999999999999999999985 34799999986542 11111000 0
Q ss_pred cccCCCCCC-----CCCCCcccccC-------CCCCcCChhHHhhcCeEEEeCCcEEEEeCCCC--EEEcCC---Cc---
Q 021871 100 YLFPLDKKP-----ARLPGFHTCVG-------SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNS---GK--- 159 (306)
Q Consensus 100 ~~~~~~~~~-----~~~~~~~~~~~-------~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~--~v~~~~---g~--- 159 (306)
.++...... ..++.+..... .....++..++++.+..++++++|.+++.... .+.+.+ |.
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~ 162 (447)
T 2gv8_A 83 PLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPIS 162 (447)
T ss_dssp CCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEE
T ss_pred chhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeE
Confidence 000000000 00000000000 00011223334445666788999999976543 566554 55
Q ss_pred EEecCcEEEeeCC--CCccCCCCCCCC-----CCC-EEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCC
Q 021871 160 LLKYGSLIVATGC--TASRFPEKIGGY-----LPG-VHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKL 231 (306)
Q Consensus 160 ~~~~~~lila~G~--~~~~~~~~~~~~-----~~g-~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~ 231 (306)
.+.||+||+|+|. .+. .|.+++.+ .++ +.+..++.+. ....+++|+|||+|.+|+|+|..|++.+.
T Consensus 163 ~~~~d~VVvAtG~~s~p~-~p~i~G~~~~~~~~~g~v~~~~~~~~~-----~~~~~k~VvVvG~G~sg~e~A~~l~~~~~ 236 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPY-IPNIKGLDEYAKAVPGSVLHSSLFREP-----ELFVGESVLVVGGASSANDLVRHLTPVAK 236 (447)
T ss_dssp EEEESEEEECCCSSSSBC-BCCCBTHHHHHHHSTTSEEEGGGCCCG-----GGGTTCCEEEECSSHHHHHHHHHHTTTSC
T ss_pred EEEeCEEEECCCCCCCCC-CCCCCChhhhhccCCccEEEecccCCh-----hhcCCCEEEEEccCcCHHHHHHHHHHHhC
Confidence 7999999999998 444 35544421 122 3332222221 12258999999999999999999999999
Q ss_pred c-EEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCE-EecCEEEEecCCC
Q 021871 232 D-TTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGST-IDADTVILLPYDQ 306 (306)
Q Consensus 232 ~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~-i~~d~vv~a~g~~ 306 (306)
+ |+++.|.+.+ ++..||++ ...|++++. +++ +|.+.+|+. +++|.||+|||..
T Consensus 237 ~~V~l~~r~~~~----------------l~~~~i~~--~~~v~~~~~-~~~---~v~~~dG~~~~~~D~vi~atG~~ 291 (447)
T 2gv8_A 237 HPIYQSLLGGGD----------------IQNESLQQ--VPEITKFDP-TTR---EIYLKGGKVLSNIDRVIYCTGYL 291 (447)
T ss_dssp SSEEEECTTCCS----------------CBCSSEEE--ECCEEEEET-TTT---EEEETTTEEECCCSEEEECCCBC
T ss_pred CcEEEEeCCCCc----------------CCCCCeEE--ecCeEEEec-CCC---EEEECCCCEeccCCEEEECCCCC
Confidence 9 9999998765 34457764 467888873 222 577889976 6899999999963
No 88
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.89 E-value=1.3e-23 Score=198.82 Aligned_cols=256 Identities=15% Similarity=0.112 Sum_probs=158.1
Q ss_pred cccccccCC--CCCccCCccCcccccccccee---eecccCCCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 13 GLSLWCPQS--PSLHRIRHSSAKNFQRRGFVV---AYSSFANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 13 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+|+. |... .......|..||...++.... ....+...++||+|||||++||++|+.|+++|+ +|+|+|+++
T Consensus 347 ~Cn~-C~~~~~~~~~~~~C~~n~~~g~e~~~~~~~~~~~~~~~~~~VvIIGgGpAGl~aA~~L~~~G~---~Vtlie~~~ 422 (729)
T 1o94_A 347 GCNV-CISRWEIGGPPMICTQNATAGEEYRRGWHPEKFRQTKNKDSVLIVGAGPSGSEAARVLMESGY---TVHLTDTAE 422 (729)
T ss_dssp CCCH-HHHHHHHSSSCCCCSSCTTTTTHHHHCCCTTCCCCCSSCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSS
T ss_pred ccch-hcccccccCCceeeccCccccccccccccccccccccCCceEEEECCCHHHHHHHHHHHHCCC---eEEEEeCCC
Confidence 4553 5533 123356699999877654211 111223456899999999999999999999998 999999987
Q ss_pred CCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHHhhc------CeEEEeCCcEEEEeCCCCEEEcCCCcEE
Q 021871 88 YAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYKEK------GIEMIYQDPVTSIDIEKQTLITNSGKLL 161 (306)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~v~~~~~~~v~~v~~~~~~v~~~~g~~~ 161 (306)
..+- .+.... .+|++.... ....++...++.. ++++..+ ..+.++++..+
T Consensus 423 ~~GG--------~~~~~~----~~pg~~~~~--~~~~~~~~~i~~~~~~~~~~v~i~~~----------~~v~~~~~~~~ 478 (729)
T 1o94_A 423 KIGG--------HLNQVA----ALPGLGEWS--YHRDYRETQITKLLKKNKESQLALGQ----------KPMTADDVLQY 478 (729)
T ss_dssp STTT--------THHHHT----TSTTCGGGH--HHHHHHHHHHHHHHHHSTTCEEECSC----------CCCCHHHHHTS
T ss_pred CcCC--------eeeecc----cCCChHHHH--HHHHHHHHHHHHhhcccCCceEEEeC----------eEEehhhcccc
Confidence 6421 111000 111111100 0001111112221 3343322 22333344468
Q ss_pred ecCcEEEeeCCCCc-------cCCCCCCCC--CCCEEEEccHHHHHHHHHhhhcCCeEEEEc--CCHHHHHHHHHHHhCC
Q 021871 162 KYGSLIVATGCTAS-------RFPEKIGGY--LPGVHYIRDVADADALISSLEKAKKVVVVG--GGYIGMEVAAAAVGWK 230 (306)
Q Consensus 162 ~~~~lila~G~~~~-------~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~v~viG--~g~~a~e~a~~l~~~~ 230 (306)
.||+||+|||+.+. ..|++++.+ .+++... . +.+......+++|+||| +|.+|+|+|..|.+.+
T Consensus 479 ~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~---~--~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G 553 (729)
T 1o94_A 479 GADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTP---E--QVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAG 553 (729)
T ss_dssp CCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECH---H--HHHHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTT
T ss_pred CCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEH---H--HHhcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcC
Confidence 99999999998843 234455543 3444322 1 22222334578999999 9999999999999999
Q ss_pred CcEEEEecCCccccc-ccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCC-CE---------------
Q 021871 231 LDTTIIFPENHLLQR-LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG-ST--------------- 293 (306)
Q Consensus 231 ~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G-~~--------------- 293 (306)
.+|+++.+.+ +.+. ..+.. ...+.+.++++||++++++.|++|+. ++........++ +.
T Consensus 554 ~~Vtlv~~~~-l~~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~~i~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (729)
T 1o94_A 554 HEVTIVSGVH-LANYMHFTLE-YPNMMRRLHELHVEELGDHFCSRIEP--GRMEIYNIWGDGSKRTYRGPGVSPRDANTS 629 (729)
T ss_dssp CEEEEEESSC-TTHHHHHTTC-HHHHHHHHHHTTCEEECSEEEEEEET--TEEEEEETTCSCSCCCCCCTTSCSSCCCCC
T ss_pred CEEEEEeccc-cccccccccc-HHHHHHHHHhCCCEEEcCcEEEEEEC--CeEEEEEecCCceEEecccccccccccCCc
Confidence 9999999998 5542 12222 45677888999999999999999983 332211111233 23
Q ss_pred ---EecCEEEEecCC
Q 021871 294 ---IDADTVILLPYD 305 (306)
Q Consensus 294 ---i~~d~vv~a~g~ 305 (306)
+++|.||+|+|+
T Consensus 630 ~~~i~aD~Vv~a~G~ 644 (729)
T 1o94_A 630 HRWIEFDSLVLVTGR 644 (729)
T ss_dssp CEEEECSEEEEESCE
T ss_pred ceeeeCCEEEECCCC
Confidence 999999999985
No 89
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.88 E-value=1.7e-22 Score=196.16 Aligned_cols=225 Identities=16% Similarity=0.176 Sum_probs=156.6
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.+||+|||||++|+++|.+|++.|+ +|+|+|+++..+- .+... ....+++... .+....+...+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~---~V~lie~~~~~GG--------~~~~~--~k~~i~~~~~---~~~~~~~~~~l 191 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGA---RVMLLDERAEAGG--------TLLDT--AGEQIDGMDS---SAWIEQVTSEL 191 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSSG--------GGGGS--SCCEETTEEH---HHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC---cEEEEeCCCCCCc--------eeccC--CccccCCCCH---HHHHHHHHHHH
Confidence 4799999999999999999999998 9999999866431 11100 0000111000 00011222334
Q ss_pred hhc-CeEEEeCCcEEEEeCCCCEEE---------c--------CCCcEEecCcEEEeeCCCCccCCCCCCCCCCCEEEEc
Q 021871 131 KEK-GIEMIYQDPVTSIDIEKQTLI---------T--------NSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIR 192 (306)
Q Consensus 131 ~~~-~v~~~~~~~v~~v~~~~~~v~---------~--------~~g~~~~~~~lila~G~~~~~~~~~~~~~~~g~~~~~ 192 (306)
.+. +++++.+++|..++....... + .++..+.||+||+|||+.+.. |++++.+.+++....
T Consensus 192 ~~~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~-~~ipG~~~~gv~~~~ 270 (965)
T 2gag_A 192 AEAEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERP-IVFENNDRPGIMLAG 270 (965)
T ss_dssp HHSTTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECC-CCCBTCCSTTEEEHH
T ss_pred hhcCCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCC-CCCCCCCCCCEEEhH
Confidence 443 899998888988876443111 1 011368999999999998774 567877778876543
Q ss_pred cHHHHHHHHHh--hhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCc
Q 021871 193 DVADADALISS--LEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGA 270 (306)
Q Consensus 193 ~~~~~~~~~~~--~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~ 270 (306)
+...+.+. ...+++++|||+|.+|+|+|..|.+.+.+|+++.+.+.+.+. .+.+++.||++++++
T Consensus 271 ---~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~~----------~~~l~~~GV~v~~~~ 337 (965)
T 2gag_A 271 ---AVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSSISAA----------AAQAVADGVQVISGS 337 (965)
T ss_dssp ---HHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCHH----------HHHHHHTTCCEEETE
T ss_pred ---HHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccchh----------HHHHHhCCeEEEeCC
Confidence 22233332 123589999999999999999999999999999998876531 466788999999999
Q ss_pred eEEEEEeCCCCcEEEEEeCC-------C--CEEecCEEEEecCC
Q 021871 271 SIKNLEAGSDGRVAAVKLED-------G--STIDADTVILLPYD 305 (306)
Q Consensus 271 ~v~~i~~~~~~~v~~v~~~~-------G--~~i~~d~vv~a~g~ 305 (306)
.|++|+..+++++.+|++.+ | +++++|.||+|+|.
T Consensus 338 ~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~ 381 (965)
T 2gag_A 338 VVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGF 381 (965)
T ss_dssp EEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCE
T ss_pred EeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCc
Confidence 99999852255555666653 5 57999999999985
No 90
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.88 E-value=1.4e-21 Score=179.39 Aligned_cols=185 Identities=17% Similarity=0.168 Sum_probs=116.5
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC-------CCCCccc-cccccCCCCCC-----CCCCCccc
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP-------YERPALT-KGYLFPLDKKP-----ARLPGFHT 116 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~-------~~~~~~~-~~~~~~~~~~~-----~~~~~~~~ 116 (306)
..+||+|||||++|+++|+.|++.|+ +|+|+|+++..+ |...... ....+...-.+ ..++.. .
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~---~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~-~ 90 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGR---SVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTER-Y 90 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBS-S
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCC---CEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccc-c
Confidence 35799999999999999999999998 999999987643 1110000 00000000000 000000 0
Q ss_pred ccCCCCCcCChhHHhhcC--eEEEeCCcEEEEeCCC----CEEEcCCCcEEecCcEEEeeCCC--CccCCCCCCCC-CCC
Q 021871 117 CVGSGGERQTPEWYKEKG--IEMIYQDPVTSIDIEK----QTLITNSGKLLKYGSLIVATGCT--ASRFPEKIGGY-LPG 187 (306)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~--v~~~~~~~v~~v~~~~----~~v~~~~g~~~~~~~lila~G~~--~~~~~~~~~~~-~~g 187 (306)
....+...++....++.+ .+++++++|.+++.++ ..+.+++|..++||+||+|+|.. +. .|.++|.+ .+|
T Consensus 91 ~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~-~p~i~G~~~f~G 169 (542)
T 1w4x_A 91 ASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQ-LPNFPGLKDFAG 169 (542)
T ss_dssp CBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCC-CCCCTTGGGCCS
T ss_pred CCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCC-CCCCCCcccCCC
Confidence 000001122333344555 4678899999987643 36788888889999999999964 43 45555532 445
Q ss_pred EEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcc
Q 021871 188 VHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (306)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~ 242 (306)
.......+..+ .....+++|+|||+|.+|+|++..++..+.+|+++.|.+.+
T Consensus 170 ~~~hs~~~~~~---~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 170 NLYHTGNWPHE---PVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHF 221 (542)
T ss_dssp EEEEGGGCCSS---CCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred ceEECCCCCCc---hhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcc
Confidence 33322111100 01135899999999999999999999999999999998876
No 91
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.87 E-value=6.1e-21 Score=173.28 Aligned_cols=192 Identities=17% Similarity=0.176 Sum_probs=118.2
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCC-----------CCcEEEeccCCCCCCCCCccccccccC---------CCCCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMA-----------DGRLCIVSKEAYAPYERPALTKGYLFP---------LDKKP 108 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~-----------~~~V~vie~~~~~~~~~~~~~~~~~~~---------~~~~~ 108 (306)
...+||||||+||+||++|..|.+.+.+ ....+.+|+.+.+.|+...+..+.-.. ...+.
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~ 116 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPR 116 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTT
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCC
Confidence 4468999999999999999999987542 235788999888776543322221100 00000
Q ss_pred CCCCCccc------------------ccCCCCCcCChhHHhhcCeEEEeCCcEEEEeCCC----------CEEEcCCC--
Q 021871 109 ARLPGFHT------------------CVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEK----------QTLITNSG-- 158 (306)
Q Consensus 109 ~~~~~~~~------------------~~~~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~----------~~v~~~~g-- 158 (306)
..+ .|.. ....+...|+..+.++++..++++++|+++.... +.|.+.++
T Consensus 117 s~~-sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~ 195 (501)
T 4b63_A 117 SSF-TFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVET 195 (501)
T ss_dssp CTT-SHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTT
T ss_pred Ccc-chHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCC
Confidence 000 0000 0001112234444455666788899999986422 35555433
Q ss_pred ---cEEecCcEEEeeCCCCccCCCCCCCCCCCEEEEccHHHH-HHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhC--CCc
Q 021871 159 ---KLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADA-DALISSLEKAKKVVVVGGGYIGMEVAAAAVGW--KLD 232 (306)
Q Consensus 159 ---~~~~~~~lila~G~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~--~~~ 232 (306)
..+.+++||+|+|..|. +|..++. .+.+.+-.++.+. +.+......+|+|+|||+|.||+|++..|++. +.+
T Consensus 196 g~~~~~~ar~vVlatG~~P~-iP~~~~~-~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~ 273 (501)
T 4b63_A 196 GEISARRTRKVVIAIGGTAK-MPSGLPQ-DPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSR 273 (501)
T ss_dssp CCEEEEEEEEEEECCCCEEC-CCTTSCC-CTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHHHHHHSTTCE
T ss_pred ceEEEEEeCEEEECcCCCCC-CCCCCCC-CcceeeccccccchhhccccccCCcEEEEECCcHHHHHHHHHHHhcCCCce
Confidence 36899999999998766 3443332 2334443333322 22222234689999999999999999999864 678
Q ss_pred EEEEecCCccc
Q 021871 233 TTIIFPENHLL 243 (306)
Q Consensus 233 v~~~~~~~~~~ 243 (306)
|+++.|.+.+.
T Consensus 274 v~~~~R~~~~~ 284 (501)
T 4b63_A 274 TTLIMRDSAMR 284 (501)
T ss_dssp EEEECSSSSCC
T ss_pred EEEEeCCCccc
Confidence 99999987654
No 92
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.86 E-value=1.7e-21 Score=190.34 Aligned_cols=226 Identities=19% Similarity=0.213 Sum_probs=148.5
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
..+||+|||||+|||++|.+|+++|+. +|+|+|+.+..+. .+.. ..+...++ .. .......+
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~--~Vtv~E~~~~~GG--------~~~~-~ip~~~~~--~~-----~~~~~~~~ 247 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYS--DITIFEKQEYVGG--------LSTS-EIPQFRLP--YD-----VVNFEIEL 247 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCC--CEEEEESSSSCST--------HHHH-TSCTTTSC--HH-----HHHHHHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCC--cEEEEeCCCCCCc--------cccc-cCCcccCC--HH-----HHHHHHHH
Confidence 357999999999999999999999973 5999999765421 1100 00001111 00 01223456
Q ss_pred HhhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCC-CccCCCCCCCC-CCCEEEEccHHHHHHHHHh----
Q 021871 130 YKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCT-ASRFPEKIGGY-LPGVHYIRDVADADALISS---- 203 (306)
Q Consensus 130 ~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~-~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~---- 203 (306)
+++.++++++++.+. . +.+.++++..+.||+|++|||+. ++.+|..++.. .+++....++.........
T Consensus 248 ~~~~gv~~~~~~~v~---~--~~v~~~~~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~~gv~~a~~~L~~~~~~~~~~~~ 322 (1025)
T 1gte_A 248 MKDLGVKIICGKSLS---E--NEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMC 322 (1025)
T ss_dssp HHTTTCEEEESCCBS---T--TSBCHHHHHHTTCCEEEECCCCCEECCCGGGTTCCTTTTEEEHHHHHHHHHHHHCBTTB
T ss_pred HHHCCcEEEcccEec---c--ceEEhhhcCccCCCEEEEecCCCCCCCCCCCCCCCCCCCEEEhHHHHHHHHhhcccccc
Confidence 778899999887652 1 23444444457899999999984 66544333322 3555543222211110000
Q ss_pred ------hhcCCeEEEEcCCHHHHHHHHHHHhCCC-cEEEEecCCc-ccccccCHHHHHHHHHHHHHcCCEEEcCceEEEE
Q 021871 204 ------LEKAKKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENH-LLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNL 275 (306)
Q Consensus 204 ------~~~~~~v~viG~g~~a~e~a~~l~~~~~-~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i 275 (306)
...+++|+|||+|.+|+|+|..+.+.+. +|++++|.+. .++. .+..+ +.+++.||+++.++.++++
T Consensus 323 ~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~-~~~e~-----~~~~~~Gv~~~~~~~~~~i 396 (1025)
T 1gte_A 323 ACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRA-VPEEV-----ELAKEEKCEFLPFLSPRKV 396 (1025)
T ss_dssp SCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCS-CHHHH-----HHHHHTTCEEECSEEEEEE
T ss_pred cccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCC-CHHHH-----HHHHHcCCEEEeCCCceEE
Confidence 1235699999999999999999999985 8999999873 4443 23222 4577889999999999999
Q ss_pred EeCCCCcEEEEEeC------CC---------CEEecCEEEEecCC
Q 021871 276 EAGSDGRVAAVKLE------DG---------STIDADTVILLPYD 305 (306)
Q Consensus 276 ~~~~~~~v~~v~~~------~G---------~~i~~d~vv~a~g~ 305 (306)
.. +++++.+|++. +| .++++|.||+|+|+
T Consensus 397 ~~-~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~ 440 (1025)
T 1gte_A 397 IV-KGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGS 440 (1025)
T ss_dssp EE-ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCE
T ss_pred Ec-cCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCC
Confidence 85 46666556542 22 36899999999986
No 93
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.85 E-value=3.3e-21 Score=174.83 Aligned_cols=194 Identities=16% Similarity=0.169 Sum_probs=135.5
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.+||+|||||++|+++|++|++. + +|+|+|+++..+........ ....++. . ...+...+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~---~V~vie~~~~~GG~~~~~~~--------~~~g~~~--~------~~~~~~~l 167 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-L---TVALIEERGWLGGDMWLKGI--------KQEGFNK--D------SRKVVEEL 167 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-C---CEEEECTTSSSSCSGGGTCS--------EETTTTE--E------HHHHHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHhc-C---CEEEEeCCCCCCCeeecccc--------ccCCCCC--C------HHHHHHHH
Confidence 46999999999999999999998 6 99999998765432111000 0000010 0 01111111
Q ss_pred -h--hcCeEEEeCCcEEEEeCCCCEE--Ec-CCCc--EEecCcEEEeeCCCCccCCCCCCCCCCCEEEEccHHHHHHHHH
Q 021871 131 -K--EKGIEMIYQDPVTSIDIEKQTL--IT-NSGK--LLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALIS 202 (306)
Q Consensus 131 -~--~~~v~~~~~~~v~~v~~~~~~v--~~-~~g~--~~~~~~lila~G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 202 (306)
+ +.++++++++++..++.+...+ .. +++. .+.||++|+|+|+.+.. |++++.+.+++.... +...+.+
T Consensus 168 ~~~l~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~-~~~~g~~~~gv~~~~---~~~~~~~ 243 (493)
T 1y56_A 168 VGKLNENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDST-MLFENNDMPGVFRRD---FALEVMN 243 (493)
T ss_dssp HHTCCTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEECC-CCCTTTTSTTEEEHH---HHHHHHH
T ss_pred HHHHhcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCccC-CCCCCCCCCCEEEcH---HHHHHHH
Confidence 1 4588888888888877665432 22 3443 68999999999998874 567777778876532 3333333
Q ss_pred h--hhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCC
Q 021871 203 S--LEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSD 280 (306)
Q Consensus 203 ~--~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~ 280 (306)
. ...+++++|+|+|.++++ +.+++.||++++++.|++++. +
T Consensus 244 ~~~~~~~~~vvViGgG~~gle-----------------------------------~~l~~~GV~v~~~~~v~~i~~--~ 286 (493)
T 1y56_A 244 VWEVAPGRKVAVTGSKADEVI-----------------------------------QELERWGIDYVHIPNVKRVEG--N 286 (493)
T ss_dssp TSCBCSCSEEEEESTTHHHHH-----------------------------------HHHHHHTCEEEECSSEEEEEC--S
T ss_pred hcccCCCCEEEEECCCHHHHH-----------------------------------HHHHhCCcEEEeCCeeEEEec--C
Confidence 2 224589999999999987 456778999999999999984 3
Q ss_pred CcEEEEEeCCCCEEecCEEEEecCC
Q 021871 281 GRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 281 ~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+.+..+.+.+|+++++|.||+|+|.
T Consensus 287 ~~v~~v~~~~g~~i~aD~Vv~a~G~ 311 (493)
T 1y56_A 287 EKVERVIDMNNHEYKVDALIFADGR 311 (493)
T ss_dssp SSCCEEEETTCCEEECSEEEECCCE
T ss_pred CceEEEEeCCCeEEEeCEEEECCCc
Confidence 4455688888989999999999985
No 94
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.42 E-value=1.2e-12 Score=118.91 Aligned_cols=56 Identities=29% Similarity=0.375 Sum_probs=50.8
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPY 304 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g 304 (306)
...+.+.+.+.+++.|++|+++++|++|.. +++++.+|++++|+++.+|.||++++
T Consensus 220 ~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~-~~~~~~gV~~~~g~~~~ad~VV~~a~ 275 (501)
T 4dgk_A 220 TGALVQGMIKLFQDLGGEVVLNARVSHMET-TGNKIEAVHLEDGRRFLTQAVASNAD 275 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSCEEECCC
T ss_pred CcchHHHHHHHHHHhCCceeeecceeEEEe-eCCeEEEEEecCCcEEEcCEEEECCC
Confidence 557888999999999999999999999997 67888899999999999999998764
No 95
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.41 E-value=8.3e-13 Score=115.03 Aligned_cols=57 Identities=12% Similarity=0.162 Sum_probs=48.2
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCC--EEecCEEEEecCC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS--TIDADTVILLPYD 305 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~--~i~~d~vv~a~g~ 305 (306)
+..+...+.+.+++.|++++++++|++++.++++.+ .|.+.+|+ ++.+|.||+|+|.
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~a~~VV~A~G~ 207 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGF-ELDFGGAEPMTLSCRVLINAAGL 207 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSE-EEEECTTSCEEEEEEEEEECCGG
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceE-EEEECCCceeEEEeCEEEECCCc
Confidence 457888899999999999999999999997545545 58888884 7999999999984
No 96
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.32 E-value=3.4e-12 Score=99.84 Aligned_cols=107 Identities=18% Similarity=0.191 Sum_probs=75.4
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcc-cccCCCCCcCChhHH
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFH-TCVGSGGERQTPEWY 130 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 130 (306)
+||+|||||++|+.+|..|++.|. +|+++|+.+........ ...+++++ ..........+.+.+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~---~v~lie~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~l~~~~ 66 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGL---KVLVLDGGRSKVKGVSR------------VPNYPGLLDEPSGEELLRRLEAHA 66 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC---CEEEEECSCCTTTTCSC------------CCCSTTCTTCCCHHHHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCCcccCchh------------hhccCCCcCCCCHHHHHHHHHHHH
Confidence 699999999999999999999998 99999998642211100 01112220 000111124455667
Q ss_pred hhcCeEEEeCCcEEEEeCCC--CEEEcCCCcEEecCcEEEeeCCCCc
Q 021871 131 KEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLIVATGCTAS 175 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~--~~v~~~~g~~~~~~~lila~G~~~~ 175 (306)
++.+++++.+ +|.+++.++ ..+.++++ .+.+|.+|+|+|..+.
T Consensus 67 ~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~ 111 (180)
T 2ywl_A 67 RRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPT 111 (180)
T ss_dssp HHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCH
T ss_pred HHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCC
Confidence 7789999999 999987643 36777777 8999999999998874
No 97
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.29 E-value=1.7e-10 Score=108.81 Aligned_cols=56 Identities=21% Similarity=0.217 Sum_probs=47.4
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCC-EEecCEEEEecCC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS-TIDADTVILLPYD 305 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~-~i~~d~vv~a~g~ 305 (306)
+..+...+.+.+++.|++++++++|+++..+ ++.+ .|++.+|+ ++.+|.||+|+|.
T Consensus 411 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~-~~~v-~V~t~~G~~~i~Ad~VVlAtG~ 467 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMTCHYQHELQRLKRI-DSQW-QLTFGQSQAAKHHATVILATGH 467 (689)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEC-SSSE-EEEEC-CCCCEEESEEEECCGG
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeEeEEEEe-CCeE-EEEeCCCcEEEECCEEEECCCc
Confidence 4678888999999999999999999999974 4445 68888887 8999999999984
No 98
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.26 E-value=7e-13 Score=116.92 Aligned_cols=122 Identities=16% Similarity=0.156 Sum_probs=73.9
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCC-------CCCcccc-ccc----cCCCCCCC--------
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-------ERPALTK-GYL----FPLDKKPA-------- 109 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~-------~~~~~~~-~~~----~~~~~~~~-------- 109 (306)
+.+||+|||||++|+++|+.|+++|. +|+|+|+.+..+. ..+.+.+ +.. +.......
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~---~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~ 79 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGK---SVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYT 79 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSC
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCC---CEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCC
Confidence 35899999999999999999999998 9999999875420 0000000 000 00000000
Q ss_pred -----------CCC----Ccccc----cCCCCCcCChhHHhhcCeEEEeCCcEEEEeCC----C--CEEEcCCCcEEecC
Q 021871 110 -----------RLP----GFHTC----VGSGGERQTPEWYKEKGIEMIYQDPVTSIDIE----K--QTLITNSGKLLKYG 164 (306)
Q Consensus 110 -----------~~~----~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~----~--~~v~~~~g~~~~~~ 164 (306)
.++ ..... ........+...+++.+++++++++|.++..+ . ..+.++++ .+++|
T Consensus 80 ~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad 158 (401)
T 2gqf_A 80 NWDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCK 158 (401)
T ss_dssp HHHHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEES
T ss_pred HHHHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECC
Confidence 000 00000 00001122344456679999999999988743 2 35666655 79999
Q ss_pred cEEEeeCCCCc
Q 021871 165 SLIVATGCTAS 175 (306)
Q Consensus 165 ~lila~G~~~~ 175 (306)
+||+|+|..+.
T Consensus 159 ~VVlAtG~~s~ 169 (401)
T 2gqf_A 159 NLIVATGGLSM 169 (401)
T ss_dssp EEEECCCCSSC
T ss_pred EEEECCCCccC
Confidence 99999998874
No 99
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.24 E-value=2.8e-10 Score=107.06 Aligned_cols=56 Identities=16% Similarity=0.201 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+..+...+.+.+++.|++++++++|+++..+ ++.+ .|++.+|+++.+|.||+|+|.
T Consensus 416 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~-~~~v-~V~t~~G~~i~Ad~VVlAtG~ 471 (676)
T 3ps9_A 416 PAELTRNVLELAQQQGLQIYYQYQLQNFSRK-DDCW-LLNFAGDQQATHSVVVLANGH 471 (676)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCGG
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeeeEEEEe-CCeE-EEEECCCCEEECCEEEECCCc
Confidence 4678888899999999999999999999974 4555 789988889999999999984
No 100
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.22 E-value=2.9e-11 Score=106.71 Aligned_cols=56 Identities=21% Similarity=0.309 Sum_probs=47.9
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+..+...+.+.+++.|++++.+++|+++.. +++.+.+|++.+| ++.+|.||+|+|.
T Consensus 173 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~-~~~~~~~v~~~~g-~~~a~~vV~a~G~ 228 (405)
T 2gag_B 173 HDHVAWAFARKANEMGVDIIQNCEVTGFIK-DGEKVTGVKTTRG-TIHAGKVALAGAG 228 (405)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEEEEEETTC-CEEEEEEEECCGG
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEE-eCCEEEEEEeCCc-eEECCEEEECCch
Confidence 446778888999999999999999999997 4566667888888 8999999999984
No 101
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.22 E-value=3.2e-11 Score=107.14 Aligned_cols=53 Identities=13% Similarity=0.167 Sum_probs=45.6
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPY 304 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g 304 (306)
...+.+.+.+.+++.|++|+++++|++|+. +++++ | +.+|+++.+|.||+|+|
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~-~~~~v--V-~~~g~~~~ad~Vv~a~~ 240 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINI-EEKKV--Y-TRDNEEYSFDVAISNVG 240 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEET-TTTEE--E-ETTCCEEECSEEEECSC
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEE-ECCEE--E-EeCCcEEEeCEEEECCC
Confidence 467888999999999999999999999996 45665 5 46678999999999987
No 102
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.22 E-value=1.5e-10 Score=90.34 Aligned_cols=94 Identities=21% Similarity=0.273 Sum_probs=79.5
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccccc-------------ccCHHHHHHHHHHHHHcCCEEEcCceEEEE
Q 021871 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-------------LFTPSLAQRYEQLYQQNGVKFVKGASIKNL 275 (306)
Q Consensus 209 ~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i 275 (306)
+++|||+|.+|+++|..|++.+.+|+++.+.+..+.. ..++.+.+.+.+.+++.|++++.+ +|+++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i 81 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGV 81 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEE
Confidence 6899999999999999999999999999998765521 114678888999999999999999 99999
Q ss_pred EeCCCCcEEEEEeCCCCEEecCEEEEecCCC
Q 021871 276 EAGSDGRVAAVKLEDGSTIDADTVILLPYDQ 306 (306)
Q Consensus 276 ~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~~ 306 (306)
+..++ .+ .|++++| ++++|.||+|+|..
T Consensus 82 ~~~~~-~~-~v~~~~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 82 RDMGG-VF-EVETEEG-VEKAERLLLCTHKD 109 (180)
T ss_dssp EECSS-SE-EEECSSC-EEEEEEEEECCTTC
T ss_pred EEcCC-EE-EEEECCC-EEEECEEEECCCCC
Confidence 97433 33 6888888 99999999999963
No 103
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.22 E-value=2.2e-10 Score=101.59 Aligned_cols=57 Identities=12% Similarity=0.134 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCC--EEecCEEEEecCC
Q 021871 249 PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS--TIDADTVILLPYD 305 (306)
Q Consensus 249 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~--~i~~d~vv~a~g~ 305 (306)
..+...+.+.+++.|++++.+++|++++..+++.+..+.+.+|+ ++.+|.||.|+|.
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~ 164 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGY 164 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGG
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCC
Confidence 45566777788888999999999999987556665678888997 6999999999984
No 104
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.22 E-value=3.3e-11 Score=107.95 Aligned_cols=57 Identities=21% Similarity=0.329 Sum_probs=47.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeC--------------CCCcEEEEEeCCCCEE--ecCEEEEecCC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAG--------------SDGRVAAVKLEDGSTI--DADTVILLPYD 305 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~--------------~~~~v~~v~~~~G~~i--~~d~vv~a~g~ 305 (306)
+..+...+.+.+++.|++++.+++|+++... +++.+.+|.+.+| ++ .+|.||+|+|.
T Consensus 180 ~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~ 252 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGV 252 (448)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGG
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCc
Confidence 4478888999999999999999999999851 3455557888888 78 99999999984
No 105
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.21 E-value=4.4e-11 Score=104.82 Aligned_cols=56 Identities=14% Similarity=0.226 Sum_probs=48.1
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+..+...+.+.+++.|++++.+++|++++. +++.+.+|++.+| ++.+|.||+|+|.
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~-~~~~v~gv~~~~g-~i~a~~VV~A~G~ 203 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFLI-ENNEIKGVKTNKG-IIKTGIVVNATNA 203 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEEEEEETTE-EEECSEEEECCGG
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEEE-ECCEEEEEEECCc-EEECCEEEECcch
Confidence 456778888899999999999999999997 4566666888887 8999999999984
No 106
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.21 E-value=6.9e-11 Score=105.54 Aligned_cols=57 Identities=23% Similarity=0.237 Sum_probs=50.2
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCc---eEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGA---SIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~---~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+..+...+.+.+++.|+++++++ +|+++.. +++.+.+|++.+|+++.+|.||+|+|.
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~-~~~~v~gV~t~~G~~i~Ad~VV~AtG~ 219 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIF-ENNDVKGAVTADGKIWRAERTFLCAGA 219 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEE-ETTEEEEEEETTTEEEECSEEEECCGG
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEe-cCCeEEEEEECCCCEEECCEEEECCCC
Confidence 45778888999999999999999 9999987 566777899999989999999999984
No 107
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.21 E-value=1.8e-10 Score=101.09 Aligned_cols=68 Identities=18% Similarity=0.330 Sum_probs=53.0
Q ss_pred cEEEEecCCcccccccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 232 DTTIIFPENHLLQRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 232 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
...++.+...... +..+...+.+.+++.|++++.+++|++++.+ ++.+ .|++.+| ++.+|.||+|+|.
T Consensus 136 ~~~~~~~~~~~~~---~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~~-~v~~~~g-~~~a~~vV~A~G~ 203 (389)
T 2gf3_A 136 YNAIFEPNSGVLF---SENCIRAYRELAEARGAKVLTHTRVEDFDIS-PDSV-KIETANG-SYTADKLIVSMGA 203 (389)
T ss_dssp EEEEEETTCEEEE---HHHHHHHHHHHHHHTTCEEECSCCEEEEEEC-SSCE-EEEETTE-EEEEEEEEECCGG
T ss_pred ceEEEeCCCcEEe---HHHHHHHHHHHHHHCCCEEEcCcEEEEEEec-CCeE-EEEeCCC-EEEeCEEEEecCc
Confidence 4556666554443 5678888999999999999999999999974 4444 5777776 8999999999984
No 108
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.18 E-value=6.2e-11 Score=103.66 Aligned_cols=55 Identities=18% Similarity=0.186 Sum_probs=47.1
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+..+...+.+.+++.|++++.+++|+++..+ ++.+ .|++.+| ++.+|.||+|+|.
T Consensus 153 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~-~~~~-~V~t~~g-~i~a~~VV~A~G~ 207 (381)
T 3nyc_A 153 TDALHQGYLRGIRRNQGQVLCNHEALEIRRV-DGAW-EVRCDAG-SYRAAVLVNAAGA 207 (381)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCCCCEEEEE-TTEE-EEECSSE-EEEESEEEECCGG
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEe-CCeE-EEEeCCC-EEEcCEEEECCCh
Confidence 4678888999999999999999999999874 4444 7888887 8999999999984
No 109
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.16 E-value=4.3e-11 Score=109.26 Aligned_cols=51 Identities=14% Similarity=0.078 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 250 SLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 250 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
.+.+.+.+ +.|++|+++++|++|+.+ ++.+ .|.+.+|+++.+|.||+|+|.
T Consensus 216 ~l~~~l~~---~lg~~i~~~~~V~~i~~~-~~~v-~v~~~~g~~~~ad~VI~a~p~ 266 (520)
T 1s3e_A 216 QVSERIMD---LLGDRVKLERPVIYIDQT-RENV-LVETLNHEMYEAKYVISAIPP 266 (520)
T ss_dssp HHHHHHHH---HHGGGEESSCCEEEEECS-SSSE-EEEETTSCEEEESEEEECSCG
T ss_pred HHHHHHHH---HcCCcEEcCCeeEEEEEC-CCeE-EEEECCCeEEEeCEEEECCCH
Confidence 44444443 347899999999999974 4555 488999989999999999874
No 110
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.15 E-value=3.5e-10 Score=100.49 Aligned_cols=55 Identities=22% Similarity=0.282 Sum_probs=47.7
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPY 304 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g 304 (306)
...+.+.+.+.+++.|++|+++++|++|.. +++++.+|.+. |+++.+|.||+|+|
T Consensus 195 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~-~~~~~~gv~~~-g~~~~ad~VV~a~~ 249 (425)
T 3ka7_A 195 CKGIIDALETVISANGGKIHTGQEVSKILI-ENGKAAGIIAD-DRIHDADLVISNLG 249 (425)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEET-TEEEECSEEEECSC
T ss_pred HHHHHHHHHHHHHHcCCEEEECCceeEEEE-ECCEEEEEEEC-CEEEECCEEEECCC
Confidence 456888899999999999999999999997 46677678776 77999999999987
No 111
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.15 E-value=8.2e-11 Score=95.89 Aligned_cols=114 Identities=15% Similarity=0.138 Sum_probs=72.3
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccC----C---CC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVG----S---GG 122 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~ 122 (306)
+.+||+|||||++|+.+|..|++.|. +|+|+|+.....- .. ... .+.. .....+..-.. . ..
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~---~v~lie~~~~~~G-~~-~~~-~~~~-----~~~~~~~~~~~d~~g~~~~~~ 70 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGV---RVGLLTQSLDAVM-MP-FLP-PKPP-----FPPGSLLERAYDPKDERVWAF 70 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESCGGGTT-CC-SSC-CCSC-----CCTTCHHHHHCCTTCCCHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEecCCCcCC-cc-cCc-cccc-----cchhhHHhhhccCCCCCHHHH
Confidence 45899999999999999999999998 9999999732110 00 000 0000 00000000000 0 01
Q ss_pred CcCChhHHhhc-CeEEEeCCcEEEEeCCCC---EEEcCCCcEEecCcEEEeeCCCCc
Q 021871 123 ERQTPEWYKEK-GIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTAS 175 (306)
Q Consensus 123 ~~~~~~~~~~~-~v~~~~~~~v~~v~~~~~---~v~~~~g~~~~~~~lila~G~~~~ 175 (306)
...+.+.+++. +++++ +++|.++..++. .+.+.++..+++|++|+|+|....
T Consensus 71 ~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 71 HARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLG 126 (232)
T ss_dssp HHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSS
T ss_pred HHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 12334555665 89988 568998876543 366777878999999999998754
No 112
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.14 E-value=1.4e-10 Score=107.01 Aligned_cols=56 Identities=13% Similarity=0.204 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeC-CC--CEEecCEEEEecCC
Q 021871 249 PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE-DG--STIDADTVILLPYD 305 (306)
Q Consensus 249 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~-~G--~~i~~d~vv~a~g~ 305 (306)
..+...+.+.+++.|++++.+++|+++... ++.+..|.+. +| .++.+|.||.|+|.
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~~G~~~~i~AdlVV~AdG~ 186 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRRGGESVTVESDFVIDAGGS 186 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEETTEEEEEEESEEEECCGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEecCCceEEEEcCEEEECCCC
Confidence 456667778888899999999999999963 4444478777 66 47999999999984
No 113
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.14 E-value=4.9e-11 Score=104.51 Aligned_cols=123 Identities=17% Similarity=0.209 Sum_probs=76.8
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccc--c---------ccc---cCCCCCCCC----
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALT--K---------GYL---FPLDKKPAR---- 110 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~--~---------~~~---~~~~~~~~~---- 110 (306)
++.+||+|||||++|+++|..|++.|+ +|+|+|+.+.......... . |.. .........
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~---~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 85 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGW---DVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETW 85 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC---CEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEE
Confidence 446899999999999999999999998 9999999865421100000 0 000 000000000
Q ss_pred --------CC--C--cccccCCCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCc
Q 021871 111 --------LP--G--FHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS 175 (306)
Q Consensus 111 --------~~--~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~ 175 (306)
++ + ...+........+.+.+.+.+++++++++|.+++.++ .+.+.+|..+++|+||.|+|....
T Consensus 86 ~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 86 MHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVG-RLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp ETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTT-EEEETTSCEEECSEEEECCCTTCH
T ss_pred eCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCC-EEEECCCCEEEcCEEEECCCccHH
Confidence 00 0 0000000011233344566789999999999998755 888888888999999999998754
No 114
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.12 E-value=1.8e-10 Score=100.83 Aligned_cols=55 Identities=13% Similarity=0.176 Sum_probs=47.1
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+..+...+.+.+++.|++++.+++|+++.. +++.+ .|++.+| ++.+|.||+|+|.
T Consensus 163 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~-~~~~~-~v~~~~g-~~~a~~vV~A~G~ 217 (382)
T 1ryi_A 163 PYFVCKAYVKAAKMLGAEIFEHTPVLHVER-DGEAL-FIKTPSG-DVWANHVVVASGV 217 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEETTCCCCEEEC-SSSSE-EEEETTE-EEEEEEEEECCGG
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCcEEEEEE-ECCEE-EEEcCCc-eEEcCEEEECCCh
Confidence 457788888999999999999999999996 45555 7888877 8999999999984
No 115
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.12 E-value=4.6e-11 Score=105.71 Aligned_cols=122 Identities=20% Similarity=0.292 Sum_probs=74.3
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCC-------CCcc------ccccccCCCCCCC------
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYE-------RPAL------TKGYLFPLDKKPA------ 109 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~-------~~~~------~~~~~~~~~~~~~------ 109 (306)
++.+||+|||||++|+++|+.|+++|. +|+|+|+.+..+.. .+.+ ...++ .......
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~---~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~-~~~~~~~~~~l~~ 100 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGR---RVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFL-SGNPHFCKSALAR 100 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEE-ESSTTTTHHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCC---cEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHh-hcCHHHHHHHHHh
Confidence 456899999999999999999999998 99999998764210 0000 00000 0000000
Q ss_pred -------------CC------CC--cccccCCCCCcCChhHHhhcCeEEEeCCcEEEEeCCCC--EEEcCCCcEEecCcE
Q 021871 110 -------------RL------PG--FHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSL 166 (306)
Q Consensus 110 -------------~~------~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~--~v~~~~g~~~~~~~l 166 (306)
.+ .+ |...........+...+++.+++++++++|.++..++. .+.+.++ .+++|+|
T Consensus 101 ~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~V 179 (417)
T 3v76_A 101 YRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASL 179 (417)
T ss_dssp SCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEE
T ss_pred cCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEE
Confidence 00 00 00000001112334445667999999999999976543 5666666 8999999
Q ss_pred EEeeCCCCc
Q 021871 167 IVATGCTAS 175 (306)
Q Consensus 167 ila~G~~~~ 175 (306)
|+|+|....
T Consensus 180 IlAtG~~S~ 188 (417)
T 3v76_A 180 VVASGGKSI 188 (417)
T ss_dssp EECCCCSSC
T ss_pred EECCCCccC
Confidence 999998763
No 116
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.11 E-value=1.2e-09 Score=95.96 Aligned_cols=55 Identities=16% Similarity=0.179 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEe---CCCCEEecCEEEEecCC
Q 021871 250 SLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL---EDGSTIDADTVILLPYD 305 (306)
Q Consensus 250 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~---~~G~~i~~d~vv~a~g~ 305 (306)
.+...+.+.+++.|++++.+++|++++. +++.+.+|.+ .++.++++|.||.|+|.
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~ 160 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIK-ENGKVAGAKIRHNNEIVDVRAKMVIAADGF 160 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEE-ETTEEEEEEEEETTEEEEEEEEEEEECCCT
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEE-eCCEEEEEEEEECCeEEEEEcCEEEECCCc
Confidence 4556777888888999999999999987 4666655766 34568999999999985
No 117
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.10 E-value=4.5e-12 Score=108.84 Aligned_cols=150 Identities=15% Similarity=0.126 Sum_probs=88.5
Q ss_pred CCCcEEEEcCChHHHHHHHHHHH--cCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCCh
Q 021871 50 ENREFVIVGGGNAAGYAARTFVE--HGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~--~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (306)
..+||+|||||||||+||++|++ .|+ +|+|+|+.+..+... ...++..+. . .......
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~---~V~viEk~~~~GG~~--~~~~~~~~~----------~-----~l~~~~~ 123 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDL---KVCIIESSVAPGGGS--WLGGQLFSA----------M-----VMRKPAH 123 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTS---CEEEECSSSSCCTTT--TCCSTTCCC----------E-----EEETTTH
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCC---eEEEEECCCCCCceE--EeCCccCCH----------H-----HHHHHHH
Confidence 35799999999999999999985 477 999999987653211 111121110 0 0123455
Q ss_pred hHHhhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCccCCCCCCCCCCCEEEEcc--HHHHHHHHHhhh
Q 021871 128 EWYKEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRD--VADADALISSLE 205 (306)
Q Consensus 128 ~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~ 205 (306)
.++++.++++..+... ....+..+++++..+..++ .++...+.. ..++........
T Consensus 124 ~~~~e~Gv~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~~~~~~~~~ 181 (326)
T 3fpz_A 124 LFLQELEIPYEDEGDY----------------VVVKHAALFISTVLSKVLQ------LPNVKLFNATCVEDLVTRPPTEK 181 (326)
T ss_dssp HHHHHTTCCCEECSSE----------------EEESCHHHHHHHHHHHHHT------STTEEEETTEEEEEEEEESSCSS
T ss_pred HHHHHcCCEEEECCcc----------------eecceeEEEEcchhhhccc------cccceeecccccceeeccCCccc
Confidence 6677888877654322 1233334444443333222 222221110 000000011233
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCc
Q 021871 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 241 (306)
Q Consensus 206 ~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~ 241 (306)
.++++.++|+|.++++.|..+...+.++++..+...
T Consensus 182 ~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~~ 217 (326)
T 3fpz_A 182 GEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGYK 217 (326)
T ss_dssp SSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCBC
T ss_pred CCCEEEEEccCceeeehhhhhhhccCcEEEEeeccc
Confidence 578999999999999999999988888888776544
No 118
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.09 E-value=3.5e-10 Score=103.03 Aligned_cols=123 Identities=17% Similarity=0.213 Sum_probs=76.5
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC--------------CCC-Cccc---ccc-ccCCCCCCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP--------------YER-PALT---KGY-LFPLDKKPAR 110 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~--------------~~~-~~~~---~~~-~~~~~~~~~~ 110 (306)
..+||+|||||++||++|+.|++.|+ +|+|+|+.+... +.. .... .+. .+........
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~---kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~ 182 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGF---NPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQ 182 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTC---CCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC---eEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEE
Confidence 35899999999999999999999998 999999985420 000 0000 000 0000000000
Q ss_pred --CCCc--------------c-cccC-----------CCCCcCChhHHhhcCeEEEeCCcEEEEeCCCC---EEEcCCCc
Q 021871 111 --LPGF--------------H-TCVG-----------SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ---TLITNSGK 159 (306)
Q Consensus 111 --~~~~--------------~-~~~~-----------~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~---~v~~~~g~ 159 (306)
.+.+ . .... ......+.+.+++.|++++++++|.++..++. .+.+.++.
T Consensus 183 i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~ 262 (549)
T 3nlc_A 183 VKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGE 262 (549)
T ss_dssp SCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSC
T ss_pred eccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCC
Confidence 0000 0 0000 00111233445668999999999999976543 47778888
Q ss_pred EEecCcEEEeeCCCCc
Q 021871 160 LLKYGSLIVATGCTAS 175 (306)
Q Consensus 160 ~~~~~~lila~G~~~~ 175 (306)
.+.+|.||+|+|..+.
T Consensus 263 ~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 263 EIKSRHVVLAVGHSAR 278 (549)
T ss_dssp EEECSCEEECCCTTCH
T ss_pred EEECCEEEECCCCChh
Confidence 8999999999998763
No 119
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.08 E-value=3.5e-10 Score=104.04 Aligned_cols=160 Identities=13% Similarity=0.128 Sum_probs=90.5
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC-CCCCCCCcccccccc---------CCCCC------------
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA-YAPYERPALTKGYLF---------PLDKK------------ 107 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~-~~~~~~~~~~~~~~~---------~~~~~------------ 107 (306)
..+||+|||||++|++||..|++.|. +|+|+|+.. ..+...+....+.+. .....
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~---kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f 103 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQ---QTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQF 103 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCC---CEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccch
Confidence 35899999999999999999999998 999999874 222111100000000 00000
Q ss_pred ---C-CCCCCcccc---cC-CCCCcCChhHHhh-cCeEEEeCCcEEEEeCCCC---EEEcCCCcEEecCcEEEeeCCCCc
Q 021871 108 ---P-ARLPGFHTC---VG-SGGERQTPEWYKE-KGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTAS 175 (306)
Q Consensus 108 ---~-~~~~~~~~~---~~-~~~~~~~~~~~~~-~~v~~~~~~~v~~v~~~~~---~v~~~~g~~~~~~~lila~G~~~~ 175 (306)
. ..-+..... .+ ......+...+++ .+++++ +.+|..+..++. .|.+.+|..+.++.||+|+|..+.
T Consensus 104 ~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 104 RILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred hhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 0 000000000 00 0001122334555 589984 678998865443 467778888999999999998876
Q ss_pred cCCCCCCCCCCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEe
Q 021871 176 RFPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIF 237 (306)
Q Consensus 176 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~ 237 (306)
.. . ++|...+ .+.+ +| +.++.+++..+.+.|.+++.+.
T Consensus 183 ~~-~-----i~G~~~~--------------~~gr---iG-g~~a~eLA~~L~~lG~~v~~~~ 220 (651)
T 3ces_A 183 GK-I-----HIGLDNY--------------SGGR---AG-DPPSIPLSRRLRELPLRVGRLK 220 (651)
T ss_dssp CE-E-----ECC-------------------------------CCHHHHHHHTTTCCEEEEC
T ss_pred Cc-c-----ccCcccC--------------CCCC---cc-chhhhHHHHHHHhcCCeEEEec
Confidence 32 2 3332211 0222 45 7788999999999998888774
No 120
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.07 E-value=1.8e-10 Score=106.04 Aligned_cols=122 Identities=20% Similarity=0.157 Sum_probs=71.6
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCC---------------ccc----------cccccCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP---------------ALT----------KGYLFPL 104 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~---------------~~~----------~~~~~~~ 104 (306)
+.+||+|||||++||++|+.|++.|+ +|+|+|+.+....... .+. .+..+..
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~---~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~ 124 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGV---GALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAG 124 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTC---CEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCC
Confidence 45899999999999999999999998 9999999765321100 000 0000000
Q ss_pred CC-CCCCC-------CCcccccCCCCCcCChhHHhhcCeEEEeCCcEEEEeCCCC--EEEc--CCC-cEEecCcEEEeeC
Q 021871 105 DK-KPARL-------PGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLIT--NSG-KLLKYGSLIVATG 171 (306)
Q Consensus 105 ~~-~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~--~v~~--~~g-~~~~~~~lila~G 171 (306)
.. ...+. +....+........+.+.+.+.+++++++++|.+++.+.. .+.+ .+| ..+++|+||.|.|
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG 204 (570)
T 3fmw_A 125 IFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDG 204 (570)
T ss_dssp BCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSC
T ss_pred cccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCC
Confidence 00 00000 0000000000011223334556899999999999877654 4555 567 6899999999999
Q ss_pred CCC
Q 021871 172 CTA 174 (306)
Q Consensus 172 ~~~ 174 (306)
...
T Consensus 205 ~~S 207 (570)
T 3fmw_A 205 GRS 207 (570)
T ss_dssp SSC
T ss_pred CCc
Confidence 754
No 121
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.06 E-value=9.4e-10 Score=98.88 Aligned_cols=39 Identities=31% Similarity=0.517 Sum_probs=33.9
Q ss_pred CEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecC
Q 021871 264 VKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPY 304 (306)
Q Consensus 264 v~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g 304 (306)
++|+++++|++|+.+++ .+ .|++.+|+++.+|.||+|+|
T Consensus 248 ~~i~~~~~V~~i~~~~~-~~-~v~~~~g~~~~ad~vi~a~p 286 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGS-CY-SLELDNGVTLDADSVIVTAP 286 (470)
T ss_dssp EEEECSCCEEEEEECSS-SE-EEEESSSCEEEESEEEECSC
T ss_pred CEEEeCCceEEEEEcCC-eE-EEEECCCCEEECCEEEECCC
Confidence 79999999999997544 44 68999998999999999987
No 122
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.06 E-value=4.1e-11 Score=106.70 Aligned_cols=54 Identities=17% Similarity=0.243 Sum_probs=41.9
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPY 304 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g 304 (306)
+..+...+.+.+++.| +|+++++|++|+.+ ++.+ .|++.+|+++++|.||+|+|
T Consensus 203 ~~g~~~l~~~~~~~~g-~i~~~~~V~~i~~~-~~~v-~v~~~~g~~~~ad~vi~a~~ 256 (431)
T 3k7m_X 203 SNGSADLVDAMSQEIP-EIRLQTVVTGIDQS-GDVV-NVTVKDGHAFQAHSVIVATP 256 (431)
T ss_dssp TTCTHHHHHHHHTTCS-CEESSCCEEEEECS-SSSE-EEEETTSCCEEEEEEEECSC
T ss_pred CCcHHHHHHHHHhhCC-ceEeCCEEEEEEEc-CCeE-EEEECCCCEEEeCEEEEecC
Confidence 3344555556666667 99999999999974 4444 58899998899999999998
No 123
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.05 E-value=2.9e-10 Score=101.78 Aligned_cols=122 Identities=18% Similarity=0.287 Sum_probs=74.7
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCC-------CCCcccc-----ccc--cCCCCCC-------
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPY-------ERPALTK-----GYL--FPLDKKP------- 108 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~-------~~~~~~~-----~~~--~~~~~~~------- 108 (306)
+.+||+|||||++|+++|+.|++.|. +|+|+|+.+..+- ....+.. .+. +......
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~---~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGA---NVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSI 101 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCC---CEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHh
Confidence 35899999999999999999999998 9999999865320 0000000 000 0000000
Q ss_pred ------------CCCC----Cccccc-----CCCCCcCChhHHhhcCeEEEeCCcEEEEeCCCC---EEEcCCCcEEecC
Q 021871 109 ------------ARLP----GFHTCV-----GSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYG 164 (306)
Q Consensus 109 ------------~~~~----~~~~~~-----~~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~---~v~~~~g~~~~~~ 164 (306)
..++ ...... .......+.+.+++.+++++++++|.++..++. .+.+.+|..+++|
T Consensus 102 ~~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad 181 (447)
T 2i0z_A 102 FNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETN 181 (447)
T ss_dssp SCHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECS
T ss_pred cCHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECC
Confidence 0000 000000 000112233445667999999999999975433 4777777779999
Q ss_pred cEEEeeCCCC
Q 021871 165 SLIVATGCTA 174 (306)
Q Consensus 165 ~lila~G~~~ 174 (306)
.||+|+|...
T Consensus 182 ~VVlAtGg~s 191 (447)
T 2i0z_A 182 HVVIAVGGKS 191 (447)
T ss_dssp CEEECCCCSS
T ss_pred EEEECCCCCc
Confidence 9999999876
No 124
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.05 E-value=3.7e-09 Score=93.04 Aligned_cols=55 Identities=22% Similarity=0.229 Sum_probs=44.9
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+..+...+.+.+++.|++++.+++|++++.+ ++.+ .|++.+| ++.+|.||+|+|.
T Consensus 152 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~-~~~v-~v~t~~g-~i~a~~VV~A~G~ 206 (397)
T 2oln_A 152 VRGTLAALFTLAQAAGATLRAGETVTELVPD-ADGV-SVTTDRG-TYRAGKVVLACGP 206 (397)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEE-TTEE-EEEESSC-EEEEEEEEECCGG
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEc-CCeE-EEEECCC-EEEcCEEEEcCCc
Confidence 4567777888888999999999999999864 4444 4777766 8999999999984
No 125
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.04 E-value=7.9e-10 Score=94.94 Aligned_cols=36 Identities=22% Similarity=0.287 Sum_probs=33.0
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (306)
++||+|||||++|+++|+.|++.|+ +|+|+|+....
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~---~V~vlE~~~~~ 37 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGH---QVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCC---cEEEEECCCCC
Confidence 4799999999999999999999998 99999998643
No 126
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.02 E-value=1.7e-09 Score=99.22 Aligned_cols=57 Identities=18% Similarity=0.328 Sum_probs=48.8
Q ss_pred CHHHHHHHHHHHHHc-CCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 248 TPSLAQRYEQLYQQN-GVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~-gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
...+...+.+.+++. ||+++.+ +|+++...+++.+..|.+.+|+++.+|.||.|+|.
T Consensus 193 ~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~ 250 (550)
T 2e4g_A 193 AHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGF 250 (550)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGG
T ss_pred HHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCC
Confidence 346778888888888 9999999 99999875567777899999988999999999984
No 127
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.01 E-value=3.5e-10 Score=102.94 Aligned_cols=53 Identities=17% Similarity=0.254 Sum_probs=44.8
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPY 304 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g 304 (306)
...+.+.+.+.+.+.|+++.++++|++|.. +++ .+++.+|+++.+|.||++++
T Consensus 221 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~-~~~---~v~~~~G~~~~ad~vI~t~P 273 (513)
T 4gde_A 221 TGGIWIAVANTLPKEKTRFGEKGKVTKVNA-NNK---TVTLQDGTTIGYKKLVSTMA 273 (513)
T ss_dssp HHHHHHHHHHTSCGGGEEESGGGCEEEEET-TTT---EEEETTSCEEEEEEEEECSC
T ss_pred HHHHHHHHHHHHHhcCeeeecceEEEEEEc-cCC---EEEEcCCCEEECCEEEECCC
Confidence 456778888888899999999999999996 344 36688999999999999876
No 128
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.01 E-value=2.6e-09 Score=93.08 Aligned_cols=55 Identities=16% Similarity=0.254 Sum_probs=46.0
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+..+...+.+.+++.|++++.+++|++++.+ ++.+ .|++.+| .+.+|.||+|+|.
T Consensus 148 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~~-~v~~~~g-~~~a~~vV~a~G~ 202 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGCAQLFNCPVTAIRHD-DDGV-TIETADG-EYQAKKAIVCAGT 202 (372)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEC-SSSE-EEEESSC-EEEEEEEEECCGG
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEc-CCEE-EEEECCC-eEEcCEEEEcCCc
Confidence 4577788888999999999999999999974 4444 5888887 6999999999984
No 129
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.99 E-value=1.7e-09 Score=95.27 Aligned_cols=124 Identities=11% Similarity=0.066 Sum_probs=73.4
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCC-c--cccc---cc--cCC-C-CCCCCCCCcccc-
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP-A--LTKG---YL--FPL-D-KKPARLPGFHTC- 117 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~-~--~~~~---~~--~~~-~-~~~~~~~~~~~~- 117 (306)
+.++||+|||||++||++|..|++.|+ +|+|+|+.+....... . +... .+ ... . ............
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~---~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 79 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGV---DVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVD 79 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCC---CEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEe
Confidence 346899999999999999999999998 9999999865311100 0 0000 00 000 0 000000000000
Q ss_pred --cCC-------C----CCcCChhHHhh--cCeEEEeCCcEEEEeCCCC--EEEcCCCcEEecCcEEEeeCCCCc
Q 021871 118 --VGS-------G----GERQTPEWYKE--KGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (306)
Q Consensus 118 --~~~-------~----~~~~~~~~~~~--~~v~~~~~~~v~~v~~~~~--~v~~~~g~~~~~~~lila~G~~~~ 175 (306)
.+. . ....+...+.+ .+++++++++|.++..+.. .+.+.+|..+++|+||.|.|....
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 80 ALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp TTTCCEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred cCCCCccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchh
Confidence 000 0 00112222322 3788899999999976543 677788888999999999997653
No 130
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.99 E-value=4.3e-10 Score=101.92 Aligned_cols=124 Identities=17% Similarity=0.048 Sum_probs=75.8
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCc-cccc---cccCCC----CCCCCCCCcccccCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPA-LTKG---YLFPLD----KKPARLPGFHTCVGS 120 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~-~~~~---~~~~~~----~~~~~~~~~~~~~~~ 120 (306)
...+||+|||||++||++|..|++.|+ +|+|+|+.+..+..... .... .+.... ...+....+..+...
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~---~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 166 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGA---RVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIR 166 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHH
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCC---eEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHH
Confidence 356899999999999999999999998 99999998764311000 0000 000000 000000000000001
Q ss_pred CCCcCChhHHhhcCeEEEeCCcEEEEeCC-----CCEEEc--C-CC--cEEecCcEEEeeCCCCc
Q 021871 121 GGERQTPEWYKEKGIEMIYQDPVTSIDIE-----KQTLIT--N-SG--KLLKYGSLIVATGCTAS 175 (306)
Q Consensus 121 ~~~~~~~~~~~~~~v~~~~~~~v~~v~~~-----~~~v~~--~-~g--~~~~~~~lila~G~~~~ 175 (306)
.....+...+++.+++++++++|.++..+ ...+.+ . +| ..+++|+||+|+|..+.
T Consensus 167 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 167 QLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 11123445556679999999999999763 235655 3 55 47899999999998765
No 131
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.99 E-value=3.4e-10 Score=100.07 Aligned_cols=125 Identities=14% Similarity=0.097 Sum_probs=70.8
Q ss_pred CCCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCcc--c-c--------cc---------------c
Q 021871 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPAL--T-K--------GY---------------L 101 (306)
Q Consensus 48 ~~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~--~-~--------~~---------------~ 101 (306)
.++++||+|||||++||++|+.|++.|+ +|+|+|+.+......... . . |. +
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~G~---~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~ 96 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQSGI---DCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAY 96 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC---CEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEE
Confidence 4557899999999999999999999998 999999986532100000 0 0 00 0
Q ss_pred cCCC--CCCCCCCCc--ccccCCCC----CcCChhHHhh--cCeEEEeCCcEEEEeCCCC--EEEcCCCcEEecCcEEEe
Q 021871 102 FPLD--KKPARLPGF--HTCVGSGG----ERQTPEWYKE--KGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVA 169 (306)
Q Consensus 102 ~~~~--~~~~~~~~~--~~~~~~~~----~~~~~~~~~~--~~v~~~~~~~v~~v~~~~~--~v~~~~g~~~~~~~lila 169 (306)
.... .....++.. ........ ...+...+.+ ..++++++++|.+++.++. .+.+.+|..+++|.||.|
T Consensus 97 ~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~A 176 (407)
T 3rp8_A 97 RDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGRDSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAA 176 (407)
T ss_dssp EETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCGGGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEEC
T ss_pred EECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCcCEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEEC
Confidence 0000 000000000 00000000 0011122211 1167888999999987554 567788889999999999
Q ss_pred eCCCCc
Q 021871 170 TGCTAS 175 (306)
Q Consensus 170 ~G~~~~ 175 (306)
.|....
T Consensus 177 dG~~S~ 182 (407)
T 3rp8_A 177 DGSHSA 182 (407)
T ss_dssp CCTTCS
T ss_pred CCcChH
Confidence 997644
No 132
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.99 E-value=9.7e-10 Score=94.81 Aligned_cols=118 Identities=17% Similarity=0.237 Sum_probs=70.2
Q ss_pred CcEEEEcCChHHHHHHHHHHH---cCCCCCcEEEeccCCCCCCCCCcc----ccccccCCCCCC----------------
Q 021871 52 REFVIVGGGNAAGYAARTFVE---HGMADGRLCIVSKEAYAPYERPAL----TKGYLFPLDKKP---------------- 108 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~---~g~~~~~V~vie~~~~~~~~~~~~----~~~~~~~~~~~~---------------- 108 (306)
+||+|||||++|+++|+.|++ .|+ +|+|+|++...+-..... ..+..+......
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~---~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~ 78 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPL---YLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYD 78 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCE---EEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCc---eEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHH
Confidence 599999999999999999999 887 999999986543100000 000000000000
Q ss_pred --------CCCC----------CcccccCCCCCcCC-hhHHhhcCeEEEeCCcEEEEeCCC--CEEEcCCCcEEecCcEE
Q 021871 109 --------ARLP----------GFHTCVGSGGERQT-PEWYKEKGIEMIYQDPVTSIDIEK--QTLITNSGKLLKYGSLI 167 (306)
Q Consensus 109 --------~~~~----------~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~v~~v~~~~--~~v~~~~g~~~~~~~li 167 (306)
..+. .............+ ....++.++++++++.|.++..++ ..+.+.+|..+.+|+||
T Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV 158 (342)
T 3qj4_A 79 ELLAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIV 158 (342)
T ss_dssp HHHHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEE
T ss_pred HHHhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEE
Confidence 0000 00000001111111 122333489999999999998654 36777778778999999
Q ss_pred EeeCC
Q 021871 168 VATGC 172 (306)
Q Consensus 168 la~G~ 172 (306)
+|+..
T Consensus 159 ~A~p~ 163 (342)
T 3qj4_A 159 LTMPV 163 (342)
T ss_dssp ECSCH
T ss_pred ECCCH
Confidence 99973
No 133
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.99 E-value=4.5e-09 Score=85.50 Aligned_cols=96 Identities=21% Similarity=0.248 Sum_probs=76.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCc-----------------ccccc------cCHHHHHHHHHHHHHc-C
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH-----------------LLQRL------FTPSLAQRYEQLYQQN-G 263 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~-----------------~~~~~------~~~~~~~~~~~~~~~~-g 263 (306)
-+|+|||+|..|++.|..|++.+.+|+++.+... +.... ....+...+.+.+++. |
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~g 83 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLRP 83 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999999998721 11110 0136667788888887 9
Q ss_pred CEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 264 VKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 264 v~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
++++ +++|+++.. +++.+..|.+.+|+++++|.||+|+|.
T Consensus 84 v~i~-~~~v~~i~~-~~~~v~~v~~~~g~~i~a~~VV~A~G~ 123 (232)
T 2cul_A 84 LHLF-QATATGLLL-EGNRVVGVRTWEGPPARGEKVVLAVGS 123 (232)
T ss_dssp EEEE-ECCEEEEEE-ETTEEEEEEETTSCCEECSEEEECCTT
T ss_pred cEEE-EeEEEEEEE-eCCEEEEEEECCCCEEECCEEEECCCC
Confidence 9999 569999986 456666788999989999999999996
No 134
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.98 E-value=2.2e-11 Score=109.63 Aligned_cols=111 Identities=18% Similarity=0.136 Sum_probs=60.6
Q ss_pred hHHhhcCeEEEeCCcEEEEeCCCCEE---EcC-CCcEEecCcEEEeeCCCCccCCCCCCCCCCCEEEEccHHHHHHHHHh
Q 021871 128 EWYKEKGIEMIYQDPVTSIDIEKQTL---ITN-SGKLLKYGSLIVATGCTASRFPEKIGGYLPGVHYIRDVADADALISS 203 (306)
Q Consensus 128 ~~~~~~~v~~~~~~~v~~v~~~~~~v---~~~-~g~~~~~~~lila~G~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 203 (306)
+.+++.+++++.++.| ++..+...+ .+. ++..+.++.+|+|+|..+..++...+. ++. ....+..+...-..
T Consensus 127 ~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~~~~~~~--~~~-tGdgi~~a~~aGa~ 202 (472)
T 2e5v_A 127 KLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLYEYSSTQ--STN-IGDGMAIAFKAGTI 202 (472)
T ss_dssp HHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGGSSSBSSC--TTC-SCHHHHHHHHTTCC
T ss_pred HHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccCccccCC--CCC-chHHHHHHHHcCCC
Confidence 3345678999999889 886554432 332 233578999999999987643321110 000 00000001000000
Q ss_pred hh-----cC-CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccccc
Q 021871 204 LE-----KA-KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR 245 (306)
Q Consensus 204 ~~-----~~-~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~ 245 (306)
+. .. ...+++|+| +++++..+...+..+ +..++++++++
T Consensus 203 ~~d~e~~q~~p~~~~~ggg--~~~~ae~~~~~G~~~-v~~~g~rf~~~ 247 (472)
T 2e5v_A 203 LADMEFVQFHPTVTSLDGE--VFLLTETLRGEGAQI-INENGERFLFN 247 (472)
T ss_dssp EECTTCEEEEEEEECGGGC--CEECCTHHHHTTCEE-EETTCCCGGGG
T ss_pred EeCCcceEEEeEEEccCCC--ceeeehhhcCCceEE-ECCCCCCCCcc
Confidence 10 11 123345655 677777777777666 77788888754
No 135
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.98 E-value=5.1e-10 Score=98.66 Aligned_cols=122 Identities=16% Similarity=0.225 Sum_probs=73.0
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCc--ccc---------cc---------------ccCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPA--LTK---------GY---------------LFPL 104 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~--~~~---------~~---------------~~~~ 104 (306)
++||+|||||++|+++|+.|++.|+ +|+|+|+.+........ +.. +. ++..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~---~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 82 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGH---RVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYH 82 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCC---cEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeC
Confidence 4799999999999999999999998 99999998653110000 000 00 0000
Q ss_pred -CCCC--CCC-----CCccccc-CCCCCcCChhHHhhc-CeEEEeCCcEEEEeCCC--C--EEEcCCCcEEecCcEEEee
Q 021871 105 -DKKP--ARL-----PGFHTCV-GSGGERQTPEWYKEK-GIEMIYQDPVTSIDIEK--Q--TLITNSGKLLKYGSLIVAT 170 (306)
Q Consensus 105 -~~~~--~~~-----~~~~~~~-~~~~~~~~~~~~~~~-~v~~~~~~~v~~v~~~~--~--~v~~~~g~~~~~~~lila~ 170 (306)
.... ... +.+.... .......+.+.+.+. +++++++++|.+++.++ . .+.+.+|..+++|.||.|+
T Consensus 83 ~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~Ad 162 (399)
T 2x3n_A 83 DGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGAD 162 (399)
T ss_dssp TTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECC
T ss_pred CCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECC
Confidence 0000 000 0000000 000011222334445 89999999999997653 3 6777888889999999999
Q ss_pred CCCCc
Q 021871 171 GCTAS 175 (306)
Q Consensus 171 G~~~~ 175 (306)
|....
T Consensus 163 G~~s~ 167 (399)
T 2x3n_A 163 GIASY 167 (399)
T ss_dssp CTTCH
T ss_pred CCChH
Confidence 97653
No 136
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.98 E-value=1.1e-09 Score=105.24 Aligned_cols=56 Identities=27% Similarity=0.348 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+..+...+.+.+++.|++++.+++|++++. +++.+.+|.+.+| ++.+|.||+|+|.
T Consensus 150 p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~-~~~~v~~V~t~~G-~i~Ad~VV~AaG~ 205 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVTYRGSTTVTGIEQ-SGGRVTGVQTADG-VIPADIVVSCAGF 205 (830)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTE-EEECSEEEECCGG
T ss_pred HHHHHHHHHHHHHHcCCEEECCceEEEEEE-eCCEEEEEEECCc-EEECCEEEECCcc
Confidence 557888899999999999999999999997 4566667888887 8999999999984
No 137
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.98 E-value=1.1e-08 Score=92.80 Aligned_cols=56 Identities=18% Similarity=0.249 Sum_probs=47.0
Q ss_pred CHHHHHHHHHHHHHcC-CEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 248 TPSLAQRYEQLYQQNG-VKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~g-v~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
...+.+.+.+.+.+.| ++|+++++|++|+.. ++.+ .|++.+|+++.+|.||+|+|.
T Consensus 254 ~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~-~~~v-~v~~~~g~~~~ad~vI~a~~~ 310 (495)
T 2vvm_A 254 QSAFARRFWEEAAGTGRLGYVFGCPVRSVVNE-RDAA-RVTARDGREFVAKRVVCTIPL 310 (495)
T ss_dssp HHHHHHHHHHHHHTTTCEEEESSCCEEEEEEC-SSSE-EEEETTCCEEEEEEEEECCCG
T ss_pred HHHHHHHHHHHhhhcCceEEEeCCEEEEEEEc-CCEE-EEEECCCCEEEcCEEEECCCH
Confidence 4467788888888888 999999999999974 4444 588888888999999999984
No 138
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.97 E-value=5e-10 Score=101.57 Aligned_cols=124 Identities=17% Similarity=0.243 Sum_probs=73.7
Q ss_pred CCCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCc--cc---------cccccCCCC-CCCC---CC
Q 021871 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPA--LT---------KGYLFPLDK-KPAR---LP 112 (306)
Q Consensus 48 ~~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~--~~---------~~~~~~~~~-~~~~---~~ 112 (306)
..+.+||+|||||++||++|..|++.|+ +|+|+|+.+........ +. -|..-.... .... +.
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~---~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~ 84 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGV---EVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFG 84 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEET
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhcccccccccc
Confidence 4556899999999999999999999998 99999998654211000 00 000000000 0000 00
Q ss_pred C--cc--c----------ccCCCCCcCChhHHhhcCeEEEeCCcEEEEeCCCC--EEEcCCCc---EEecCcEEEeeCCC
Q 021871 113 G--FH--T----------CVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGK---LLKYGSLIVATGCT 173 (306)
Q Consensus 113 ~--~~--~----------~~~~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~--~v~~~~g~---~~~~~~lila~G~~ 173 (306)
+ +. . +........+.+.+.+.+++++++++|.++..+.. .+.+.++. .+++++||.|.|..
T Consensus 85 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~ 164 (500)
T 2qa1_A 85 GLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGR 164 (500)
T ss_dssp TEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTT
T ss_pred ceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcc
Confidence 0 00 0 00000011222334557899999999999976554 45555553 79999999999976
Q ss_pred C
Q 021871 174 A 174 (306)
Q Consensus 174 ~ 174 (306)
.
T Consensus 165 S 165 (500)
T 2qa1_A 165 S 165 (500)
T ss_dssp C
T ss_pred h
Confidence 4
No 139
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.94 E-value=7.3e-10 Score=97.14 Aligned_cols=38 Identities=26% Similarity=0.435 Sum_probs=34.5
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (306)
|++|||+||||||+||++|+.|+++|+ +|+|+|+.+..
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~---~V~v~Er~~~~ 39 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGL---KTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSST
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCC---cEEEEeCCCCC
Confidence 345899999999999999999999999 99999997654
No 140
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.94 E-value=1.7e-10 Score=102.51 Aligned_cols=38 Identities=18% Similarity=0.267 Sum_probs=34.6
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcC-CCCCcEEEeccCCCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHG-MADGRLCIVSKEAYAP 90 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g-~~~~~V~vie~~~~~~ 90 (306)
+++||+|||||++||+||++|++.| + +|+|+|+++..+
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~---~v~v~E~~~~~G 43 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFH---DYTILERTDHVG 43 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCC---CEEEECSSSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCC---cEEEEECCCCCC
Confidence 4679999999999999999999999 7 999999987754
No 141
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.94 E-value=1.1e-09 Score=99.24 Aligned_cols=123 Identities=17% Similarity=0.223 Sum_probs=73.4
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCc--cc---------cccccCCCCC-CC-------
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPA--LT---------KGYLFPLDKK-PA------- 109 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~--~~---------~~~~~~~~~~-~~------- 109 (306)
.+.+||+|||||++||++|..|++.|+ +|+|+|+.+........ +. -|..-..... ..
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~---~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~ 86 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGV---DVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGG 86 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecc
Confidence 456899999999999999999999998 99999998654211000 00 0000000000 00
Q ss_pred ----------CCCCcccccCCCCCcCChhHHhhcCeEEEeCCcEEEEeCCCC--EEEcCCCc---EEecCcEEEeeCCCC
Q 021871 110 ----------RLPGFHTCVGSGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGK---LLKYGSLIVATGCTA 174 (306)
Q Consensus 110 ----------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~--~v~~~~g~---~~~~~~lila~G~~~ 174 (306)
..+....+........+.+.+.+.+++++++++|.++..+.. .+.+.++. .+++|+||.|.|...
T Consensus 87 ~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 87 RPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp EEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred eecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCccc
Confidence 000000000000111222334557899999999999976544 55565654 799999999999764
No 142
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.93 E-value=5.8e-09 Score=91.87 Aligned_cols=124 Identities=15% Similarity=0.202 Sum_probs=71.8
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCc--c--c--c--------ccc-------cCCCCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPA--L--T--K--------GYL-------FPLDKK 107 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~--~--~--~--------~~~-------~~~~~~ 107 (306)
++.+||+|||||++||++|+.|++.|+ +|+|+|+.+........ + . . |.+ ......
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~---~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~ 100 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGI---DVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVN 100 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTC---EEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEE
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCC---CEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceE
Confidence 456899999999999999999999998 99999998653211000 0 0 0 000 000000
Q ss_pred CCCCCCccccc------CCC-----CCcCChhHHhhc--CeEEEeCCcEEEEeCCCC--EEEcCCCcEEecCcEEEeeCC
Q 021871 108 PARLPGFHTCV------GSG-----GERQTPEWYKEK--GIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGC 172 (306)
Q Consensus 108 ~~~~~~~~~~~------~~~-----~~~~~~~~~~~~--~v~~~~~~~v~~v~~~~~--~v~~~~g~~~~~~~lila~G~ 172 (306)
..+..+..... ... ....+.+.+.+. +..++++++|.+++.+.. .+.+.+|..+++|+||.|.|.
T Consensus 101 ~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~ 180 (398)
T 2xdo_A 101 IADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGG 180 (398)
T ss_dssp EECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCT
T ss_pred EECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCc
Confidence 00000000000 000 000111222221 346788999999976543 677788888999999999997
Q ss_pred CCc
Q 021871 173 TAS 175 (306)
Q Consensus 173 ~~~ 175 (306)
...
T Consensus 181 ~S~ 183 (398)
T 2xdo_A 181 MSK 183 (398)
T ss_dssp TCS
T ss_pred chh
Confidence 654
No 143
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.92 E-value=1.4e-09 Score=98.09 Aligned_cols=55 Identities=29% Similarity=0.390 Sum_probs=44.8
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPY 304 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g 304 (306)
...+.+.+.+.+++.|++|+++++|++|+..+++.+ .|++. |+++.+|.||+|+|
T Consensus 233 ~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~-~v~~~-~~~~~ad~vv~a~p 287 (477)
T 3nks_A 233 LEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRW-KVSLR-DSSLEADHVISAIP 287 (477)
T ss_dssp TTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCE-EEECS-SCEEEESEEEECSC
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceE-EEEEC-CeEEEcCEEEECCC
Confidence 346788899999999999999999999997444434 57664 55899999999987
No 144
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.92 E-value=1.5e-09 Score=99.80 Aligned_cols=57 Identities=18% Similarity=0.145 Sum_probs=46.9
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCC---C--CEEecCEEEEecCC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED---G--STIDADTVILLPYD 305 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~---G--~~i~~d~vv~a~g~ 305 (306)
+..+...+.+.+++.|++++.+++|+++.. +++++.+|++.+ | ..+.+|.||.|+|.
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~-~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ 230 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIY-DQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGP 230 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCGG
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEE-cCCeEEEEEEEEcCCCceEEEECCEEEECCCc
Confidence 567778888889999999999999999997 566666777653 4 36899999999984
No 145
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.91 E-value=1.6e-09 Score=99.18 Aligned_cols=37 Identities=19% Similarity=0.332 Sum_probs=33.9
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (306)
..+||+|||||++||++|+.|+++|+ +|+|+|+.+..
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~---~v~viEr~~~~ 40 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGV---RVLVVERRPGL 40 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTC---CEEEECSSSSC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCC---CEEEEeCCCCC
Confidence 45799999999999999999999998 99999998654
No 146
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.91 E-value=4.3e-09 Score=95.73 Aligned_cols=56 Identities=18% Similarity=0.224 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCC---EEecC-EEEEecCC
Q 021871 250 SLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS---TIDAD-TVILLPYD 305 (306)
Q Consensus 250 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~---~i~~d-~vv~a~g~ 305 (306)
.+...+.+.+++.|++|+++++|+++..++++++.+|...++. ++.+| .||+|||-
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG 262 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGS 262 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCC
Confidence 6788888999999999999999999987447888888776543 58996 99999984
No 147
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.90 E-value=2.4e-10 Score=102.04 Aligned_cols=58 Identities=21% Similarity=0.340 Sum_probs=49.5
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
...+.+.+.+.+++.|++++++++|++|..++++++.+|++.+|+++.||.||++++.
T Consensus 255 ~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~ 312 (475)
T 3p1w_A 255 LGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSY 312 (475)
T ss_dssp TTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGG
T ss_pred HHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCc
Confidence 4578889999999999999999999999864577888999999989999999999853
No 148
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.90 E-value=3.8e-09 Score=96.88 Aligned_cols=159 Identities=14% Similarity=0.111 Sum_probs=91.7
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC-CCCCCCCccc-cc----ccc------C-------------CC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA-YAPYERPALT-KG----YLF------P-------------LD 105 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~-~~~~~~~~~~-~~----~~~------~-------------~~ 105 (306)
.+||+|||||+||++||..|++.|. +|+|+|+.. ..+...+... .+ .+. . +.
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~---kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~ 103 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGA---KTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFK 103 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCC---CEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhccccee
Confidence 5899999999999999999999998 999999974 2221101000 00 000 0 00
Q ss_pred CC-CCCCCCcccc---cC-CCCCcCChhHHhh-cCeEEEeCCcEEEEeCCCC---EEEcCCCcEEecCcEEEeeCCCCcc
Q 021871 106 KK-PARLPGFHTC---VG-SGGERQTPEWYKE-KGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTASR 176 (306)
Q Consensus 106 ~~-~~~~~~~~~~---~~-~~~~~~~~~~~~~-~~v~~~~~~~v~~v~~~~~---~v~~~~g~~~~~~~lila~G~~~~~ 176 (306)
.. ...-+..... .+ ......+...+++ .+++++ +.+|..+..++. .|.+.+|..+.++.||+|+|..+..
T Consensus 104 ~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~ 182 (637)
T 2zxi_A 104 MLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNG 182 (637)
T ss_dssp EESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBTC
T ss_pred ecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCccC
Confidence 00 0000000000 00 0001122334555 489985 679998875443 3677788889999999999988763
Q ss_pred CCCCCCCCCCCEEEEccHHHHHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEe
Q 021871 177 FPEKIGGYLPGVHYIRDVADADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIF 237 (306)
Q Consensus 177 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~ 237 (306)
+. ++|...+. +.+ + ++..+.+++..|.+.+.++..+.
T Consensus 183 -~~-----~~G~~~~~--------------~Gr---~-G~~~A~~la~~L~~lG~~v~~l~ 219 (637)
T 2zxi_A 183 -VI-----YIGDKMIP--------------GGR---L-GEPRSEGLSDFYRRFDFPLIRFK 219 (637)
T ss_dssp -EE-----EETTEEEE--------------CSB---T-TBCCBCTHHHHHHHTTCCCEEEE
T ss_pred -ce-----eccceecC--------------CCC---C-CchhHHHHHHHHHhcCCceEEec
Confidence 22 22322211 112 2 34567888888888887765553
No 149
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.88 E-value=2.5e-09 Score=89.83 Aligned_cols=121 Identities=12% Similarity=0.140 Sum_probs=70.2
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHc-CCCCCcEEEeccCCCCCCCCCccccccccCC----C---------CCCCCC-CCc
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEH-GMADGRLCIVSKEAYAPYERPALTKGYLFPL----D---------KKPARL-PGF 114 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~-g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~----~---------~~~~~~-~~~ 114 (306)
..+||+|||||++|+++|..|++. |. +|+|+|+.+..+-... ..+..... . ..++.. ..+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~---~V~viEk~~~~gg~~~--~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~ 112 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNV---QVAIIEQSVSPGGGAW--LGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTY 112 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTS---CEEEEESSSSCCTTTT--CCSTTCCCEEEETTTHHHHHHHTCCCEECSSE
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCC---eEEEEECCCCCCCcee--cCCcchHHHHcCcHHHHHHHHcCCCcccCCCE
Confidence 457999999999999999999997 87 9999999875421100 00000000 0 000000 000
Q ss_pred ccc-cCCCCCcCChhHHhh-cCeEEEeCCcEEEEeCCCCE---EEcC---------CC-----cEEecCcEEEeeCCCCc
Q 021871 115 HTC-VGSGGERQTPEWYKE-KGIEMIYQDPVTSIDIEKQT---LITN---------SG-----KLLKYGSLIVATGCTAS 175 (306)
Q Consensus 115 ~~~-~~~~~~~~~~~~~~~-~~v~~~~~~~v~~v~~~~~~---v~~~---------~g-----~~~~~~~lila~G~~~~ 175 (306)
... ........+.+.+.+ .+++++.+++|.++..+... +.+. ++ ..+++|.+|+|+|..+.
T Consensus 113 ~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~ 192 (284)
T 1rp0_A 113 VVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGP 192 (284)
T ss_dssp EEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSST
T ss_pred EEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchH
Confidence 000 000000122233433 68999999999999765442 2321 22 57999999999997654
No 150
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.88 E-value=2.2e-09 Score=97.69 Aligned_cols=123 Identities=20% Similarity=0.306 Sum_probs=72.6
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCC-cc-cc---------ccc---------------cC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERP-AL-TK---------GYL---------------FP 103 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~-~~-~~---------~~~---------------~~ 103 (306)
..+||+|||||++|+++|+.|++.|+ +|+|+|+.+....... .. +. +.. +.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~---~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~ 82 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGH---RVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFR 82 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTC---CEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEE
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCC---CEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEE
Confidence 34799999999999999999999998 9999999863221100 00 00 000 00
Q ss_pred CCCCCCC----C-------CCcccccC-CCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCE---E--EcCCCc--EEecC
Q 021871 104 LDKKPAR----L-------PGFHTCVG-SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQT---L--ITNSGK--LLKYG 164 (306)
Q Consensus 104 ~~~~~~~----~-------~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~---v--~~~~g~--~~~~~ 164 (306)
+...... + ..+..... ......+.+.+.+.|++++.+++|.++..++.. + ...+|. .+++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad 162 (512)
T 3e1t_A 83 WGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHAR 162 (512)
T ss_dssp CSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEE
T ss_pred ecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcC
Confidence 0000000 0 00000000 000112333455579999999999999876542 3 344563 79999
Q ss_pred cEEEeeCCCCc
Q 021871 165 SLIVATGCTAS 175 (306)
Q Consensus 165 ~lila~G~~~~ 175 (306)
.||.|+|....
T Consensus 163 ~VI~AdG~~S~ 173 (512)
T 3e1t_A 163 FIVDASGNRTR 173 (512)
T ss_dssp EEEECCCTTCS
T ss_pred EEEECCCcchH
Confidence 99999997654
No 151
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.87 E-value=5.3e-09 Score=96.49 Aligned_cols=37 Identities=27% Similarity=0.437 Sum_probs=33.9
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (306)
..+||+|||||++||++|+.|+++|. +|+|+||.+..
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~---~V~vlEk~~~~ 161 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGA---KVILIEKEPVI 161 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCCC
Confidence 35899999999999999999999998 99999998764
No 152
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.87 E-value=4.6e-08 Score=90.14 Aligned_cols=58 Identities=17% Similarity=0.207 Sum_probs=46.3
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeC--CCC--EEecCEEEEecCC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE--DGS--TIDADTVILLPYD 305 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~--~G~--~i~~d~vv~a~g~ 305 (306)
...+...+.+.+++.||+++++++|+++..++++++.+|... +|+ .+.+|.||+|||.
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg 315 (572)
T 1d4d_A 254 GAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGG 315 (572)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCC
Confidence 446778888999999999999999999976332777677765 564 5899999999985
No 153
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.87 E-value=3.9e-08 Score=83.86 Aligned_cols=36 Identities=28% Similarity=0.381 Sum_probs=32.8
Q ss_pred CCcEEEEcCChHHHHHHHHHHHc--CCCCCcEEEeccCCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEAYA 89 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~--g~~~~~V~vie~~~~~ 89 (306)
.+||+|||||++||++|+.|+++ |+ +|+|+|+....
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~---~V~LiEk~~~~ 116 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDL---RITIVEAGVAP 116 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTS---CEEEEESSSSC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCC---EEEEEeCCCcc
Confidence 58999999999999999999998 77 99999998653
No 154
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.86 E-value=1.7e-10 Score=107.04 Aligned_cols=38 Identities=24% Similarity=0.335 Sum_probs=34.0
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (306)
..+||+|||||++|+++|+.|++.|+ +|+|+|+....+
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~---~V~liE~~~~~g 82 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGY---KVAMFDIGEIDS 82 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSCCCS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCC---cEEEEeccCCCC
Confidence 45899999999999999999999998 999999987643
No 155
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.85 E-value=9.1e-09 Score=95.01 Aligned_cols=36 Identities=36% Similarity=0.535 Sum_probs=33.2
Q ss_pred CCcEEEEcCChHHHHHHHHHHHc------CCCCCcEEEeccCCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEH------GMADGRLCIVSKEAYA 89 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~------g~~~~~V~vie~~~~~ 89 (306)
.+||+|||||++||++|+.|++. |+ +|+|+|+....
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~---~V~vlEk~~~~ 76 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDL---RVCLVEKAAHI 76 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCC---CEEEECSSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCC---cEEEEeCCCCC
Confidence 48999999999999999999999 87 99999998654
No 156
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.83 E-value=8.3e-08 Score=81.34 Aligned_cols=37 Identities=22% Similarity=0.469 Sum_probs=33.0
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHc--CCCCCcEEEeccCCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEAYA 89 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~--g~~~~~V~vie~~~~~ 89 (306)
..+||+|||||++||++|+.|++. |+ +|+|+|+.+..
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~---~V~v~e~~~~~ 102 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDL---KVCIIESSVAP 102 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTS---CEEEECSSSSC
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCC---eEEEEecCccc
Confidence 346999999999999999999998 77 99999998654
No 157
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.81 E-value=4e-08 Score=84.75 Aligned_cols=96 Identities=18% Similarity=0.141 Sum_probs=78.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccc----------------------c---------CHHHHHHHH
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL----------------------F---------TPSLAQRYE 256 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~----------------------~---------~~~~~~~~~ 256 (306)
.+|+|||+|..|+..|..|++.+.+|+++.+.+.+.... . ...+.+.+.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLA 83 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHH
Confidence 369999999999999999999999999999886532110 0 057778888
Q ss_pred HHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 257 QLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 257 ~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+.+++.|++++.+++|++++. +++.+..|++.+| ++.+|.||+|||.
T Consensus 84 ~~~~~~~~~~~~~~~v~~i~~-~~~~~~~v~~~~g-~~~~d~vV~AtG~ 130 (357)
T 4a9w_A 84 QYEQKYALPVLRPIRVQRVSH-FGERLRVVARDGR-QWLARAVISATGT 130 (357)
T ss_dssp HHHHHTTCCEECSCCEEEEEE-ETTEEEEEETTSC-EEEEEEEEECCCS
T ss_pred HHHHHcCCEEEcCCEEEEEEE-CCCcEEEEEeCCC-EEEeCEEEECCCC
Confidence 888999999999999999997 4555523888887 9999999999994
No 158
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.81 E-value=3.5e-09 Score=93.04 Aligned_cols=122 Identities=16% Similarity=0.197 Sum_probs=72.6
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCC---C-CCCCcccc---------c--------------cccC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA---P-YERPALTK---------G--------------YLFP 103 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~---~-~~~~~~~~---------~--------------~~~~ 103 (306)
.+||+|||||++|+++|..|++.|+ +|+|+|+.+.. . .....+.. | ..+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~---~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~ 78 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGI---DNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIA 78 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTC---CEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEE
T ss_pred CccEEEECCCHHHHHHHHHHHHCCC---CEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEE
Confidence 4799999999999999999999998 99999997631 0 00000000 0 0000
Q ss_pred CCCC--CCCCC----C-cccccC-CCCCcCChhHHhhcCeEEEeCCcEEEEeCCC---CEEEc-CCCc--EEecCcEEEe
Q 021871 104 LDKK--PARLP----G-FHTCVG-SGGERQTPEWYKEKGIEMIYQDPVTSIDIEK---QTLIT-NSGK--LLKYGSLIVA 169 (306)
Q Consensus 104 ~~~~--~~~~~----~-~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~---~~v~~-~~g~--~~~~~~lila 169 (306)
.... ..+++ + ...... ......+.+.+.+.+++++++++|.++..++ ..+.+ ++|. .+++|.||.|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~A 158 (394)
T 1k0i_A 79 FAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGC 158 (394)
T ss_dssp ETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEEC
T ss_pred ECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEEC
Confidence 0000 00000 0 000000 0001123333455689999999999997642 35666 6776 7999999999
Q ss_pred eCCCCc
Q 021871 170 TGCTAS 175 (306)
Q Consensus 170 ~G~~~~ 175 (306)
.|....
T Consensus 159 dG~~S~ 164 (394)
T 1k0i_A 159 DGFHGI 164 (394)
T ss_dssp CCTTCS
T ss_pred CCCCcH
Confidence 997654
No 159
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.80 E-value=6e-10 Score=99.88 Aligned_cols=122 Identities=16% Similarity=0.201 Sum_probs=71.2
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC--CCCCc--cccccc----------------------cCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP--YERPA--LTKGYL----------------------FPL 104 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~--~~~~~--~~~~~~----------------------~~~ 104 (306)
.+||+|||||++|+++|+.|++.|+ +|+|+|+.+... ..... +....+ +..
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~---~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 82 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGL---KILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSP 82 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSC---CEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECT
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECC
Confidence 4899999999999999999999998 999999986421 10000 000000 000
Q ss_pred CC-CCCCCCCcccccC-CCCCcCChhHHhhcCeEEEeCCcEEEEeCCCCE---EEcC---CCc--EEecCcEEEeeCCCC
Q 021871 105 DK-KPARLPGFHTCVG-SGGERQTPEWYKEKGIEMIYQDPVTSIDIEKQT---LITN---SGK--LLKYGSLIVATGCTA 174 (306)
Q Consensus 105 ~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~---v~~~---~g~--~~~~~~lila~G~~~ 174 (306)
.. ....+++...... ......+.+.+.+.|++++.+++|.++..++.. +.+. +|+ .+++|.||.|+|...
T Consensus 83 ~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 83 DMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp TSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred CCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 00 0000000000000 000112223344578999999999998765543 3343 565 799999999999664
Q ss_pred c
Q 021871 175 S 175 (306)
Q Consensus 175 ~ 175 (306)
.
T Consensus 163 ~ 163 (453)
T 3atr_A 163 S 163 (453)
T ss_dssp T
T ss_pred h
Confidence 3
No 160
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.80 E-value=4.5e-09 Score=87.22 Aligned_cols=36 Identities=22% Similarity=0.287 Sum_probs=33.6
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (306)
..||+||||||+||+||+.|+++|+ +|+|+||.+..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~---~V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGH---QVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCCCC
Confidence 4799999999999999999999999 99999998764
No 161
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.80 E-value=5.1e-09 Score=96.45 Aligned_cols=37 Identities=24% Similarity=0.420 Sum_probs=33.9
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (306)
..+||+|||||++||++|+.|++.|. +|+|+||.+..
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~---~V~vlEk~~~~ 156 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGA---NVILVDKAPFS 156 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTC---CEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCC---cEEEEeCCCCC
Confidence 45799999999999999999999998 99999998754
No 162
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.80 E-value=3.5e-08 Score=89.90 Aligned_cols=98 Identities=15% Similarity=0.250 Sum_probs=81.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccc--------------------------c--------------c-
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL--------------------------Q--------------R- 245 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~--------------------------~--------------~- 245 (306)
..+|+|||+|+.|+..|..|++.+.+|+++.+++.+. . .
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 4679999999999999999999999999999885320 0 0
Q ss_pred ------------------------------ccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEe
Q 021871 246 ------------------------------LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTID 295 (306)
Q Consensus 246 ------------------------------~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~ 295 (306)
.....+.+.+.+.+++.|++++++++|+++.. +++.+.+|++.+|+++.
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~-~~~~v~gV~l~~G~~i~ 265 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHM-EDGQITGVTLSNGEEIK 265 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEE-SSSBEEEEEETTSCEEE
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEE-eCCEEEEEEECCCCEEE
Confidence 00145666778888889999999999999987 56667689999999999
Q ss_pred cCEEEEecCC
Q 021871 296 ADTVILLPYD 305 (306)
Q Consensus 296 ~d~vv~a~g~ 305 (306)
+|.||+|+|.
T Consensus 266 Ad~VVlA~G~ 275 (549)
T 3nlc_A 266 SRHVVLAVGH 275 (549)
T ss_dssp CSCEEECCCT
T ss_pred CCEEEECCCC
Confidence 9999999995
No 163
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.78 E-value=1.8e-09 Score=97.89 Aligned_cols=100 Identities=16% Similarity=0.164 Sum_probs=77.1
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccccc--------------------------------ccCHHHHH
Q 021871 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR--------------------------------LFTPSLAQ 253 (306)
Q Consensus 206 ~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~--------------------------------~~~~~~~~ 253 (306)
...+|+|||+|..|+.+|..|++.|.+|+++++.+.+... .....+.+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~ 170 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQL 170 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHH
Confidence 3568999999999999999999999999999988654210 00145666
Q ss_pred HHHHHHHHcCCEEEcCceEEEEEeCC-CCcEEEEEe--C-CC--CEEecCEEEEecCC
Q 021871 254 RYEQLYQQNGVKFVKGASIKNLEAGS-DGRVAAVKL--E-DG--STIDADTVILLPYD 305 (306)
Q Consensus 254 ~~~~~~~~~gv~i~~~~~v~~i~~~~-~~~v~~v~~--~-~G--~~i~~d~vv~a~g~ 305 (306)
.+.+.+++.|++++++++|++++..+ ++....|++ . +| .++.+|.||.|+|.
T Consensus 171 ~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~ 228 (497)
T 2bry_A 171 LLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGG 228 (497)
T ss_dssp HHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCT
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCC
Confidence 77888888999999999999998631 222225666 4 56 47999999999995
No 164
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.76 E-value=5.2e-08 Score=83.26 Aligned_cols=96 Identities=17% Similarity=0.202 Sum_probs=79.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccc------------------cCHHHHHHHHHHHHHcCCEEEcC
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL------------------FTPSLAQRYEQLYQQNGVKFVKG 269 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~gv~i~~~ 269 (306)
.+|+|||+|..|+..|..|++.+.+|+++.+.+.+.... ....+...+.+.+++.|++++.+
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLE 87 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEcc
Confidence 579999999999999999999999999999987533110 13567777888888889999999
Q ss_pred ceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 270 ASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 270 ~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
++|++++..+++.+ .|.+.+|+ +.+|.+|+|||.
T Consensus 88 ~~v~~i~~~~~~~~-~v~~~~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 88 QAVESVEKQADGVF-KLVTNEET-HYSKTVIITAGN 121 (332)
T ss_dssp CCEEEEEECTTSCE-EEEESSEE-EEEEEEEECCTT
T ss_pred CEEEEEEECCCCcE-EEEECCCE-EEeCEEEECCCC
Confidence 99999997544344 58888884 999999999996
No 165
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.74 E-value=5.9e-08 Score=89.59 Aligned_cols=57 Identities=19% Similarity=0.166 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEe---CCCC--EEecCEEEEecCC
Q 021871 249 PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL---EDGS--TIDADTVILLPYD 305 (306)
Q Consensus 249 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~---~~G~--~i~~d~vv~a~g~ 305 (306)
..+...+.+.+++.||+++.++.|+++..++++++.+|.. .+|+ .+.+|.||+|||.
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg 204 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGG 204 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCC
Confidence 4566778888888899999999999998633677767765 4665 5889999999985
No 166
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.74 E-value=3.6e-08 Score=89.43 Aligned_cols=36 Identities=17% Similarity=0.446 Sum_probs=32.6
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
+.+||+|||||++|+++|+.|+++|+ +|+|+|+.+.
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~G~---~V~llE~~~~ 37 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGRGL---SVLMLEAQDL 37 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSST
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCC---CEEEEECCCC
Confidence 35799999999999999999999998 9999999753
No 167
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.73 E-value=1.4e-08 Score=89.38 Aligned_cols=35 Identities=23% Similarity=0.400 Sum_probs=32.4
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCC
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (306)
.+|+||||||+||++|..|+++|+ +|+|+|+.+..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~---~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGI---KVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC---CEEEEecCCCC
Confidence 489999999999999999999999 99999997654
No 168
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.71 E-value=1.6e-08 Score=93.11 Aligned_cols=123 Identities=17% Similarity=0.286 Sum_probs=71.6
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC-CCCCC--Cccc--------------cccc--------cC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY-APYER--PALT--------------KGYL--------FP 103 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~-~~~~~--~~~~--------------~~~~--------~~ 103 (306)
...+||+|||||++|++||..|++.|. +|+|+|+... .+... +... .+.. ..
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~---kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~ 95 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGL---HCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQ 95 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEE
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCC---cEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCc
Confidence 456899999999999999999999998 9999999742 22110 1000 0000 00
Q ss_pred CCCCC-CCCCCcccc---cC-CCCCcCChhHHhh-cCeEEEeCCcEEEEeCCCCE---EEcCCCcEEecCcEEEeeCCCC
Q 021871 104 LDKKP-ARLPGFHTC---VG-SGGERQTPEWYKE-KGIEMIYQDPVTSIDIEKQT---LITNSGKLLKYGSLIVATGCTA 174 (306)
Q Consensus 104 ~~~~~-~~~~~~~~~---~~-~~~~~~~~~~~~~-~~v~~~~~~~v~~v~~~~~~---v~~~~g~~~~~~~lila~G~~~ 174 (306)
+.... ..-+..... .+ ......+.+.+++ .+++++ +..|..+..++.. +.+.+|..+.++.||+|+|..+
T Consensus 96 f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 96 FRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp EEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred hhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 00000 000000000 00 0001123334555 388986 4588887654442 6677888899999999999886
Q ss_pred c
Q 021871 175 S 175 (306)
Q Consensus 175 ~ 175 (306)
.
T Consensus 175 ~ 175 (641)
T 3cp8_A 175 N 175 (641)
T ss_dssp T
T ss_pred C
Confidence 5
No 169
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.71 E-value=9.3e-08 Score=84.50 Aligned_cols=96 Identities=20% Similarity=0.238 Sum_probs=77.5
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccc----------------------------------------
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL---------------------------------------- 246 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~---------------------------------------- 246 (306)
..+|+|||+|..|+..|..+++.+.+|+++++.+......
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDF 106 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHHH
Confidence 4579999999999999999999999999999876532100
Q ss_pred -----------------------cCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEec
Q 021871 247 -----------------------FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLP 303 (306)
Q Consensus 247 -----------------------~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~ 303 (306)
....+.+.+.+.+++.||+++++++|+++..+ ++.+ .|++.+| ++.+|.||+|+
T Consensus 107 ~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~-~~~~-~V~~~~g-~i~ad~VIlAt 183 (417)
T 3v76_A 107 VALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERT-ASGF-RVTTSAG-TVDAASLVVAS 183 (417)
T ss_dssp HHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEE-TTEE-EEEETTE-EEEESEEEECC
T ss_pred HHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEe-CCEE-EEEECCc-EEEeeEEEECC
Confidence 01256667888888899999999999999864 4444 6888888 99999999999
Q ss_pred CC
Q 021871 304 YD 305 (306)
Q Consensus 304 g~ 305 (306)
|.
T Consensus 184 G~ 185 (417)
T 3v76_A 184 GG 185 (417)
T ss_dssp CC
T ss_pred CC
Confidence 95
No 170
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.70 E-value=1.6e-07 Score=81.43 Aligned_cols=98 Identities=14% Similarity=0.163 Sum_probs=80.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccccc------------------ccCHHHHHHHHHHHHHcCCEEEc
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------------------LFTPSLAQRYEQLYQQNGVKFVK 268 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~gv~i~~ 268 (306)
..+|+|||+|+.|+..|..|++.+.+|+++.+.+.+... .....+.+.+.+.+++.+++++.
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 93 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVL 93 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEc
Confidence 357999999999999999999999999999987654210 01256777788888888999999
Q ss_pred CceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 269 GASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 269 ~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+++|+.++..+++.+ .|.+.+|+.+.+|.+|+|+|.
T Consensus 94 ~~~v~~i~~~~~~~~-~v~~~~g~~~~~~~li~AtG~ 129 (360)
T 3ab1_A 94 NETVTKYTKLDDGTF-ETRTNTGNVYRSRAVLIAAGL 129 (360)
T ss_dssp SCCEEEEEECTTSCE-EEEETTSCEEEEEEEEECCTT
T ss_pred CCEEEEEEECCCceE-EEEECCCcEEEeeEEEEccCC
Confidence 999999997544444 588888889999999999996
No 171
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.70 E-value=2.8e-08 Score=89.06 Aligned_cols=98 Identities=16% Similarity=0.215 Sum_probs=75.8
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.++++|||||++|+.+|..|++.|. +|+++|+.+...- . .. + .....+.+.+
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~---~V~lv~~~~~~l~---~---------~~-----~--------~~~~~l~~~l 218 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGA---EVIVLEYMDRILP---T---------MD-----L--------EVSRAAERVF 218 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSCT---T---------SC-----H--------HHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC---EEEEEecCCcccc---c---------cC-----H--------HHHHHHHHHH
Confidence 4789999999999999999999997 9999998765310 0 00 0 0013456667
Q ss_pred hhcCeEEEeCCcEEEEeCCCC--EEEcCCCcEEecCcEEEeeCCCCcc
Q 021871 131 KEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASR 176 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~~--~v~~~~g~~~~~~~lila~G~~~~~ 176 (306)
++.+++++++++|.+++.+.. .+.++++..+.+|.+|+|+|..++.
T Consensus 219 ~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 219 KKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp HHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCC
Confidence 888999999999999987554 4555677889999999999988764
No 172
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.69 E-value=1.4e-08 Score=89.84 Aligned_cols=37 Identities=16% Similarity=0.270 Sum_probs=33.3
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCc-EEEeccCCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGR-LCIVSKEAYA 89 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~-V~vie~~~~~ 89 (306)
..+||+|||||++||++|..|++.|+ + |+|+|+.+..
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~---~~v~v~E~~~~~ 40 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGI---GKVTLLESSSEI 40 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC---SEEEEEESSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCC---CeEEEEECCCCc
Confidence 45899999999999999999999998 8 9999998653
No 173
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.68 E-value=1.9e-07 Score=84.92 Aligned_cols=57 Identities=14% Similarity=0.204 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
...+...+.+.+++.|++++.+ +|++++.++++.+..|++.+|+++.+|.||.|+|.
T Consensus 172 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~ 228 (511)
T 2weu_A 172 ADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGF 228 (511)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGG
T ss_pred HHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCc
Confidence 4567777888888899999999 99999875667666899999988999999999985
No 174
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.67 E-value=2.1e-07 Score=79.71 Aligned_cols=96 Identities=17% Similarity=0.164 Sum_probs=77.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccccc------------------ccCHHHHHHHHHHHHHcCCEEEcC
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------------------LFTPSLAQRYEQLYQQNGVKFVKG 269 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~gv~i~~~ 269 (306)
.+|+|||+|..|+..|..|++.+.+|+++.+.+.+... .....+.+.+.+.+++.+++++.+
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 85 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSLG 85 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEEeC
Confidence 47999999999999999999999999999987654211 012456677777888889999999
Q ss_pred ceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 270 ASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 270 ~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
++|+.++.. ++.+ .|.+.+|+.+.+|.+|+|||.
T Consensus 86 ~~v~~i~~~-~~~~-~v~~~~g~~~~~~~lv~AtG~ 119 (335)
T 2zbw_A 86 ERAETLERE-GDLF-KVTTSQGNAYTAKAVIIAAGV 119 (335)
T ss_dssp CCEEEEEEE-TTEE-EEEETTSCEEEEEEEEECCTT
T ss_pred CEEEEEEEC-CCEE-EEEECCCCEEEeCEEEECCCC
Confidence 999999864 3343 588888888999999999996
No 175
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.67 E-value=2.8e-08 Score=91.49 Aligned_cols=57 Identities=16% Similarity=0.111 Sum_probs=45.2
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeC---CCC--EEecCEEEEecCC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE---DGS--TIDADTVILLPYD 305 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~---~G~--~i~~d~vv~a~g~ 305 (306)
+..+...+.+.+++.|++++.+++|+++.. +++.+.+|++. +|+ .+.+|.||+|+|.
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~-~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ 248 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLY-EGDQIVGVKARDLLTDEVIEIKAKLVINTSGP 248 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEBSCEEECCGG
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEE-eCCEEEEEEEEEcCCCCEEEEEcCEEEECCCh
Confidence 556777788888999999999999999987 45566567653 343 6999999999984
No 176
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.66 E-value=2.1e-07 Score=77.97 Aligned_cols=97 Identities=19% Similarity=0.164 Sum_probs=74.3
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC-CCcEEEEecCCccccc-------------------------------------ccCH
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGW-KLDTTIIFPENHLLQR-------------------------------------LFTP 249 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~-~~~v~~~~~~~~~~~~-------------------------------------~~~~ 249 (306)
..|+|||+|.+|+..|..|++. +.+|+++.+.+.+... ....
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 119 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAA 119 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHH
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHH
Confidence 4699999999999999999997 9999999998654210 0123
Q ss_pred HHHHHHHHHHHH-cCCEEEcCceEEEEEeCCCCcEEEEEeC---------CC-----CEEecCEEEEecCC
Q 021871 250 SLAQRYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVKLE---------DG-----STIDADTVILLPYD 305 (306)
Q Consensus 250 ~~~~~~~~~~~~-~gv~i~~~~~v~~i~~~~~~~v~~v~~~---------~G-----~~i~~d~vv~a~g~ 305 (306)
.+...+.+.+.+ .|++++.+++|+++.. +++++.+|.+. +| ..+++|.||+|+|.
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~-~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~ 189 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIV-KGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGH 189 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEE-ETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEe-cCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCC
Confidence 455566666665 6999999999999986 45666566653 32 47999999999994
No 177
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.66 E-value=6.9e-08 Score=85.24 Aligned_cols=96 Identities=18% Similarity=0.283 Sum_probs=75.8
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.++|+|||||+.|+.+|..|.+.|. +|+++++.+...-. . ++ .+....+.+.+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l~~-------~-~~----------------~~~~~~l~~~l 197 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGV---HVSLVETQPRLMSR-------A-AP----------------ATLADFVARYH 197 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSSTT-------T-SC----------------HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC---EEEEEEeCCccccc-------c-cC----------------HHHHHHHHHHH
Confidence 5799999999999999999999997 99999987652100 0 00 00013456677
Q ss_pred hhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCc
Q 021871 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS 175 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~ 175 (306)
++.|++++.++++.+++ ++ .+.+.+|..+.+|.+++|+|..|+
T Consensus 198 ~~~GV~i~~~~~v~~i~-~~-~v~~~~g~~i~~D~vi~a~G~~p~ 240 (408)
T 2gqw_A 198 AAQGVDLRFERSVTGSV-DG-VVLLDDGTRIAADMVVVGIGVLAN 240 (408)
T ss_dssp HHTTCEEEESCCEEEEE-TT-EEEETTSCEEECSEEEECSCEEEC
T ss_pred HHcCcEEEeCCEEEEEE-CC-EEEECCCCEEEcCEEEECcCCCcc
Confidence 88999999999999998 44 788888889999999999998765
No 178
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.65 E-value=5.7e-09 Score=92.17 Aligned_cols=35 Identities=20% Similarity=0.325 Sum_probs=32.2
Q ss_pred CCcEEEEcCChHHHHHHHHHHHc--CCCCCcEEEeccCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEAY 88 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~--g~~~~~V~vie~~~~ 88 (306)
.+||+|||||++|+++|++|+++ |+ +|+|+|+...
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~---~V~vlE~~~~ 72 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGR---SLLLVEEGGL 72 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTS---CEEEECSSCS
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCC---eEEEEeCCCC
Confidence 47999999999999999999999 88 9999999753
No 179
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.64 E-value=2.7e-07 Score=78.96 Aligned_cols=97 Identities=15% Similarity=0.173 Sum_probs=76.9
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCC----ccc------------cc----ccCHHHHHHHHHHHHHcCCE
Q 021871 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN----HLL------------QR----LFTPSLAQRYEQLYQQNGVK 265 (306)
Q Consensus 206 ~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~----~~~------------~~----~~~~~~~~~~~~~~~~~gv~ 265 (306)
...+|+|||+|..|+..|..|++.+.+|+++.+.+ ... +. .....+...+.+.+++.|++
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 100 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTE 100 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCCE
Confidence 35689999999999999999999999999999854 111 11 11347778888999999999
Q ss_pred EEcCceEEEEEeCCCCcEEEEEe---CCCCEEecCEEEEecCC
Q 021871 266 FVKGASIKNLEAGSDGRVAAVKL---EDGSTIDADTVILLPYD 305 (306)
Q Consensus 266 i~~~~~v~~i~~~~~~~v~~v~~---~~G~~i~~d~vv~a~g~ 305 (306)
++.++ |.+++. +++.+ .+.+ .++..+.+|.+|+|||.
T Consensus 101 i~~~~-v~~i~~-~~~~~-~v~~~~~~~~~~~~~d~vvlAtG~ 140 (338)
T 3itj_A 101 IITET-VSKVDL-SSKPF-KLWTEFNEDAEPVTTDAIILATGA 140 (338)
T ss_dssp EECSC-EEEEEC-SSSSE-EEEETTCSSSCCEEEEEEEECCCE
T ss_pred EEEeE-EEEEEE-cCCEE-EEEEEecCCCcEEEeCEEEECcCC
Confidence 99998 999996 44444 4666 46678999999999984
No 180
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.64 E-value=6.6e-08 Score=84.66 Aligned_cols=98 Identities=12% Similarity=0.177 Sum_probs=75.9
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.++++|||||+.|+.+|..|.+.|. +|+++++.+...-. . . + ......+.+.+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~~~~-------~-~---------~-------~~~~~~l~~~l 197 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGY---QLDVVAPCEQVMPG-------L-L---------H-------PAAAKAVQAGL 197 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSSTT-------T-S---------C-------HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC---eEEEEecCcchhhc-------c-c---------C-------HHHHHHHHHHH
Confidence 5799999999999999999999998 99999987552100 0 0 0 00013456667
Q ss_pred hhcCeEEEeCCcEEEEeCCCC--EEEcCCCcEEecCcEEEeeCCCCc
Q 021871 131 KEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~~--~v~~~~g~~~~~~~lila~G~~~~ 175 (306)
++.|++++++++|.+++.++. .+.+.+|..+++|.+++|+|..++
T Consensus 198 ~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~ 244 (384)
T 2v3a_A 198 EGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPR 244 (384)
T ss_dssp HTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcC
Confidence 788999999999999976543 567778888999999999998765
No 181
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.64 E-value=3.2e-08 Score=90.58 Aligned_cols=36 Identities=31% Similarity=0.460 Sum_probs=32.7
Q ss_pred CCCcEEEEcCChHHHHHHHHHHH---cCCCCCcEEEeccCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVE---HGMADGRLCIVSKEAY 88 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~---~g~~~~~V~vie~~~~ 88 (306)
..+||+|||||++|+++|+.|++ .|+ +|+|+|+...
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~---~V~liE~~~~ 42 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQA---NITLIESAAI 42 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSC---EEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCC---EEEEECCCCC
Confidence 45899999999999999999999 888 9999999653
No 182
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.64 E-value=6.6e-08 Score=86.48 Aligned_cols=98 Identities=15% Similarity=0.105 Sum_probs=76.5
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.++++|||||+.|+.+|..|++.|. +|+++++.+...- . ++ + .....+.+.+
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l~---~------~~--------~--------~~~~~l~~~l 218 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGA---KTHLFEMFDAPLP---S------FD--------P--------MISETLVEVM 218 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSST---T------SC--------H--------HHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCC---EEEEEEeCCchhh---h------hh--------H--------HHHHHHHHHH
Confidence 5799999999999999999999997 9999998754210 0 00 0 0023456677
Q ss_pred hhcCeEEEeCCcEEEEeCCC---CEEEcCCCcEEecCcEEEeeCCCCcc
Q 021871 131 KEKGIEMIYQDPVTSIDIEK---QTLITNSGKLLKYGSLIVATGCTASR 176 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~---~~v~~~~g~~~~~~~lila~G~~~~~ 176 (306)
++.|++++++++|.+++.++ ..+.+++|+.+.+|.+++|+|..|+.
T Consensus 219 ~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 219 NAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPAN 267 (450)
T ss_dssp HHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred HHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 88899999999999998643 36777888889999999999987763
No 183
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.63 E-value=3.1e-07 Score=78.00 Aligned_cols=95 Identities=19% Similarity=0.211 Sum_probs=76.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecC--Cccc--------cc---ccCHHHHHHHHHHHHHcCCEEEcCceEEE
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE--NHLL--------QR---LFTPSLAQRYEQLYQQNGVKFVKGASIKN 274 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~--~~~~--------~~---~~~~~~~~~~~~~~~~~gv~i~~~~~v~~ 274 (306)
.+|+|||+|..|+..|..|++.+.+|+++++. ..+. +. .....+.+.+.+.+++.|++++. ++|.+
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~ 94 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEK 94 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCEEE
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEE
Confidence 57999999999999999999999999999986 1111 11 11356777788888889999999 89999
Q ss_pred EEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 275 LEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 275 i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
++. +++.+ .+.+.+|+.+.+|.+|+|||.
T Consensus 95 i~~-~~~~~-~v~~~~g~~~~~d~lvlAtG~ 123 (323)
T 3f8d_A 95 IEN-RGDEF-VVKTKRKGEFKADSVILGIGV 123 (323)
T ss_dssp EEE-C--CE-EEEESSSCEEEEEEEEECCCC
T ss_pred EEe-cCCEE-EEEECCCCEEEcCEEEECcCC
Confidence 997 34444 588888889999999999985
No 184
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.62 E-value=7.7e-08 Score=83.72 Aligned_cols=92 Identities=20% Similarity=0.278 Sum_probs=73.6
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHHh
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 131 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (306)
++++|||||+.|+.+|..|++.|. +|+++++.+...- ++ . +....+.+.++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l~----------~~-----~-----------~~~~~l~~~l~ 194 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGY---HVKLIHRGAMFLG----------LD-----E-----------ELSNMIKDMLE 194 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTC---EEEEECSSSCCTT----------CC-----H-----------HHHHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCC---EEEEEeCCCeecc----------CC-----H-----------HHHHHHHHHHH
Confidence 689999999999999999999997 9999998754210 00 0 00234566788
Q ss_pred hcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCc
Q 021871 132 EKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS 175 (306)
Q Consensus 132 ~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~ 175 (306)
+.|++++.++++.+++ ...+.+++|+ +.+|.+++|+|..|+
T Consensus 195 ~~gV~i~~~~~v~~i~--~~~v~~~~g~-i~~D~vi~a~G~~p~ 235 (367)
T 1xhc_A 195 ETGVKFFLNSELLEAN--EEGVLTNSGF-IEGKVKICAIGIVPN 235 (367)
T ss_dssp HTTEEEECSCCEEEEC--SSEEEETTEE-EECSCEEEECCEEEC
T ss_pred HCCCEEEcCCEEEEEE--eeEEEECCCE-EEcCEEEECcCCCcC
Confidence 8999999999999987 3467788887 999999999998766
No 185
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.62 E-value=1.9e-07 Score=86.47 Aligned_cols=35 Identities=26% Similarity=0.331 Sum_probs=32.2
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcC--CCCCcEEEeccCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHG--MADGRLCIVSKEAY 88 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g--~~~~~V~vie~~~~ 88 (306)
.+||+|||||++||++|+.|++.| . +|+|+||...
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~---~V~vlEk~~~ 41 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNA---KIALISKVYP 41 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTC---CEEEEESSCG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCC---cEEEEeCCCC
Confidence 479999999999999999999999 6 9999999754
No 186
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.61 E-value=1.1e-07 Score=85.00 Aligned_cols=98 Identities=16% Similarity=0.217 Sum_probs=74.3
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
..++++|||||++|+.+|..|++.|. +|+++|+.+...-. . ++ .+....+.+.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~---~Vtlv~~~~~~l~~-------~-~~----------------~~~~~~l~~~ 200 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGK---KVTVIDILDRPLGV-------Y-LD----------------KEFTDVLTEE 200 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSTTTT-------T-CC----------------HHHHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC---eEEEEecCcccccc-------c-CC----------------HHHHHHHHHH
Confidence 46899999999999999999999998 99999987643110 0 00 0002345666
Q ss_pred HhhcCeEEEeCCcEEEEeCCCC--EEEcCCCcEEecCcEEEeeCCCCc
Q 021871 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (306)
Q Consensus 130 ~~~~~v~~~~~~~v~~v~~~~~--~v~~~~g~~~~~~~lila~G~~~~ 175 (306)
+++.|+++++++.|.+++.++. .+.+ ++..+.+|.+++|+|..|+
T Consensus 201 l~~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 201 MEANNITIATGETVERYEGDGRVQKVVT-DKNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp HHTTTEEEEESCCEEEEECSSBCCEEEE-SSCEEECSEEEECSCEEES
T ss_pred HHhCCCEEEcCCEEEEEEccCcEEEEEE-CCCEEECCEEEECcCCCCC
Confidence 7788999999999999987643 3555 4567999999999998776
No 187
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.61 E-value=7.7e-08 Score=86.40 Aligned_cols=98 Identities=22% Similarity=0.317 Sum_probs=76.3
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
..+++|||||..|+.+|..|++.|. +|+++++.+...-. ++ + .....+.+.+
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~---~Vtlv~~~~~~l~~---------~~--------~--------~~~~~l~~~l 217 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGS---EVTVVALEDRLLFQ---------FD--------P--------LLSATLAENM 217 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSSTT---------SC--------H--------HHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCC---EEEEEEcCCccccc---------cC--------H--------HHHHHHHHHH
Confidence 5699999999999999999999997 99999987542100 00 0 0013456667
Q ss_pred hhcCeEEEeCCcEEEEeCCC--CEEEcCCCc-EEecCcEEEeeCCCCcc
Q 021871 131 KEKGIEMIYQDPVTSIDIEK--QTLITNSGK-LLKYGSLIVATGCTASR 176 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~--~~v~~~~g~-~~~~~~lila~G~~~~~ 176 (306)
++.+++++++++|.+++.++ ..+.+++|+ .+.+|.+++|+|..|+.
T Consensus 218 ~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 218 HAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp HHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESC
T ss_pred HHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCC
Confidence 88999999999999997643 367778888 89999999999988764
No 188
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.60 E-value=4.4e-07 Score=81.07 Aligned_cols=97 Identities=23% Similarity=0.365 Sum_probs=78.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccc-------------------c-----------------------
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ-------------------R----------------------- 245 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~-------------------~----------------------- 245 (306)
-.|+|||+|..|+-.|..+++.+.+|+++++.+.... .
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNED 106 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHHH
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHHH
Confidence 4799999999999999999999999999998753210 0
Q ss_pred -------------------cc-----CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEE
Q 021871 246 -------------------LF-----TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVIL 301 (306)
Q Consensus 246 -------------------~~-----~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~ 301 (306)
.+ ...+.+.+.+.+++.||+++++++|+++.. +++.+.+|++.+|+++.+|.||+
T Consensus 107 ~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~-~~~~v~~V~~~~G~~i~Ad~VVl 185 (447)
T 2i0z_A 107 IITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEY-ENGQTKAVILQTGEVLETNHVVI 185 (447)
T ss_dssp HHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTCCEEECSCEEE
T ss_pred HHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEe-cCCcEEEEEECCCCEEECCEEEE
Confidence 00 134556677788889999999999999986 45665689999987799999999
Q ss_pred ecCC
Q 021871 302 LPYD 305 (306)
Q Consensus 302 a~g~ 305 (306)
|+|.
T Consensus 186 AtGg 189 (447)
T 2i0z_A 186 AVGG 189 (447)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9985
No 189
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.60 E-value=4.2e-07 Score=79.52 Aligned_cols=95 Identities=22% Similarity=0.382 Sum_probs=73.4
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccccc--ccCH---------HHHHHHHHHHHHcCCEEEcCceEEEE
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR--LFTP---------SLAQRYEQLYQQNGVKFVKGASIKNL 275 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~--~~~~---------~~~~~~~~~~~~~gv~i~~~~~v~~i 275 (306)
.-+|+|||+|..|+..|..|...+.+|+++.+.+..... .++. .+.....+.+++.|++++.+++|++|
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~i 88 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATSI 88 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEEE
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEEE
Confidence 357999999999999999997778899999998764211 0111 11122456677889999999999999
Q ss_pred EeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 276 EAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 276 ~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+. ++ + .|++++|+++.+|.+|+|||.
T Consensus 89 d~-~~-~--~v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 89 DP-NN-K--LVTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp ET-TT-T--EEEETTSCEEECSEEEECCCE
T ss_pred EC-CC-C--EEEECCCCEEECCEEEEecCC
Confidence 95 33 3 478899999999999999984
No 190
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.59 E-value=1.7e-07 Score=83.54 Aligned_cols=95 Identities=15% Similarity=0.261 Sum_probs=76.2
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
..+++|||||+.|+.+|..|++.|. +|+++++.+...-. .+ .+....+...+
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~ll~~-----------~d--------------~~~~~~~~~~l 198 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGL---HPTLIHRSDKINKL-----------MD--------------ADMNQPILDEL 198 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC---EEEEEESSSCCSTT-----------SC--------------GGGGHHHHHHH
T ss_pred CcEEEEECCccchhhhHHHHHhcCC---cceeeeeecccccc-----------cc--------------chhHHHHHHHh
Confidence 5689999999999999999999998 99999987553100 00 00124566778
Q ss_pred hhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCc
Q 021871 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS 175 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~ 175 (306)
++.+++++++++|.+++. ..+.+++++.+++|.+++|+|..|+
T Consensus 199 ~~~gV~i~~~~~v~~~~~--~~v~~~~g~~~~~D~vl~a~G~~Pn 241 (437)
T 4eqs_A 199 DKREIPYRLNEEINAING--NEITFKSGKVEHYDMIIEGVGTHPN 241 (437)
T ss_dssp HHTTCCEEESCCEEEEET--TEEEETTSCEEECSEEEECCCEEES
T ss_pred hccceEEEeccEEEEecC--CeeeecCCeEEeeeeEEEEeceecC
Confidence 889999999999988764 4688889999999999999998775
No 191
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.59 E-value=5e-07 Score=79.44 Aligned_cols=96 Identities=11% Similarity=0.172 Sum_probs=76.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccc--------------------cc---------------------
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ--------------------RL--------------------- 246 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~--------------------~~--------------------- 246 (306)
-+|+|||+|..|+..|..+++.+.+|+++++.+.+.. ..
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFI 84 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHHH
Confidence 4689999999999999999999999999998764310 00
Q ss_pred ----------------------cCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCC---CCcEEEEEeCCCCEEecCEEEE
Q 021871 247 ----------------------FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGS---DGRVAAVKLEDGSTIDADTVIL 301 (306)
Q Consensus 247 ----------------------~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~---~~~v~~v~~~~G~~i~~d~vv~ 301 (306)
....+.+.+.+.+++.||++++++.|+++..++ ++.+ .|++.+| ++.+|.||+
T Consensus 85 ~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~-~v~~~~g-~i~ad~VVl 162 (401)
T 2gqf_A 85 SLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRF-VLQVNST-QWQCKNLIV 162 (401)
T ss_dssp HHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCE-EEEETTE-EEEESEEEE
T ss_pred HHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeE-EEEECCC-EEECCEEEE
Confidence 134555678888888999999999999998631 3444 6888777 899999999
Q ss_pred ecCC
Q 021871 302 LPYD 305 (306)
Q Consensus 302 a~g~ 305 (306)
|||.
T Consensus 163 AtG~ 166 (401)
T 2gqf_A 163 ATGG 166 (401)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9985
No 192
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.59 E-value=8e-08 Score=86.31 Aligned_cols=98 Identities=11% Similarity=0.181 Sum_probs=74.4
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.++++|||||+.|+.+|..|++.|. +|+++|+.+...-. .+ .+....+.+.+
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l~~---------~~----------------~~~~~~l~~~l 220 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGA---EVTLIEYMPEILPQ---------GD----------------PETAALLRRAL 220 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSSTT---------SC----------------HHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---eEEEEEcCCccccc---------cC----------------HHHHHHHHHHH
Confidence 4799999999999999999999997 99999987553100 00 00013456677
Q ss_pred hhcCeEEEeCCcEEEEeCCCC--EEEcC-C--Cc--EEecCcEEEeeCCCCcc
Q 021871 131 KEKGIEMIYQDPVTSIDIEKQ--TLITN-S--GK--LLKYGSLIVATGCTASR 176 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~~--~v~~~-~--g~--~~~~~~lila~G~~~~~ 176 (306)
++.|++++++++|.+++.++. .+.+. + |+ .+.+|.+++|+|..|+.
T Consensus 221 ~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 221 EKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRT 273 (464)
T ss_dssp HHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESC
T ss_pred HhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCC
Confidence 889999999999999986543 35544 5 65 79999999999988763
No 193
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.59 E-value=3.4e-07 Score=83.63 Aligned_cols=98 Identities=16% Similarity=0.141 Sum_probs=78.8
Q ss_pred CeEEEEcCCHHHHHHHHHHH-hCCCcEEEEecCCccccc------------------------------------ccCHH
Q 021871 208 KKVVVVGGGYIGMEVAAAAV-GWKLDTTIIFPENHLLQR------------------------------------LFTPS 250 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~-~~~~~v~~~~~~~~~~~~------------------------------------~~~~~ 250 (306)
.+|+|||+|..|+.+|..|+ +.+.+|+++.+.+.+... ...+.
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~e 88 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPE 88 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHH
Confidence 47999999999999999999 889999999997543210 00235
Q ss_pred HHHHHHHHHHHcCC--EEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 251 LAQRYEQLYQQNGV--KFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 251 ~~~~~~~~~~~~gv--~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+.+.+.+.+++.|+ ++.++++|++++..+++....|++.+|+++.+|.||+|+|.
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGL 145 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcc
Confidence 66777888888888 89999999999875553334689999988999999999993
No 194
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.59 E-value=6.9e-08 Score=86.57 Aligned_cols=97 Identities=18% Similarity=0.208 Sum_probs=73.4
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.++++|||||++|+.+|..|++.|. +|+++++.+...- . ++ . .....+.+.+
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l~---~------~~-----~-----------~~~~~l~~~l 222 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGA---QVSVVEARERILP---T------YD-----S-----------ELTAPVAESL 222 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTC---EEEEECSSSSSST---T------SC-----H-----------HHHHHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC---eEEEEEcCCcccc---c------cC-----H-----------HHHHHHHHHH
Confidence 5789999999999999999999998 9999998765310 0 00 0 0013455667
Q ss_pred hhcCeEEEeCCcEEEEeCCCC-EEEcCCC--cEEecCcEEEeeCCCCcc
Q 021871 131 KEKGIEMIYQDPVTSIDIEKQ-TLITNSG--KLLKYGSLIVATGCTASR 176 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~~-~v~~~~g--~~~~~~~lila~G~~~~~ 176 (306)
++.|++++++++|.+++. +. .+..++| ..+.+|.+++|+|..|+.
T Consensus 223 ~~~gv~i~~~~~v~~i~~-~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 223 KKLGIALHLGHSVEGYEN-GCLLANDGKGGQLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp HHHTCEEETTCEEEEEET-TEEEEECSSSCCCEECCSCEEECCCEEECC
T ss_pred HHCCCEEEECCEEEEEEe-CCEEEEECCCceEEEECCEEEECcCCCcCC
Confidence 888999999999999987 43 2332345 589999999999988764
No 195
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.59 E-value=5.4e-08 Score=89.24 Aligned_cols=36 Identities=17% Similarity=0.257 Sum_probs=33.2
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (306)
.+||+|||||++||++|..|++.|+ +|+|+|+.+..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~---~V~vlEr~~~~ 61 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQV---GHLVVEQTDGT 61 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSCSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC---CEEEEeCCCCC
Confidence 4799999999999999999999998 99999998654
No 196
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.58 E-value=6.5e-07 Score=78.15 Aligned_cols=94 Identities=18% Similarity=0.231 Sum_probs=77.4
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccccc-----------------------------------------
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR----------------------------------------- 245 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~----------------------------------------- 245 (306)
..+|+|||+|..|+.+|..|++.+.+|+++++.+.....
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 468999999999999999999999999999987654210
Q ss_pred -------------ccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 246 -------------LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 246 -------------~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
.....+...+.+.+++.|++++.+++|++++. ++ .|++.+|+++.+|.||.|+|.
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~g~~~~ad~vV~AdG~ 158 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQTGEVLEADLIVGADGV 158 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETTSCEEECSEEEECCCT
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECCCCEEEcCEEEECCCc
Confidence 00145567788888889999999999999985 44 477888989999999999985
No 197
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.58 E-value=3.7e-07 Score=83.60 Aligned_cols=98 Identities=14% Similarity=0.153 Sum_probs=79.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccccc------------------------------------ccCHH
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------------------------------------LFTPS 250 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~------------------------------------~~~~~ 250 (306)
..+|+|||+|..|+.+|..|.+.+.+|+++.+.+.+... ...++
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~e 100 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPE 100 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHH
Confidence 357999999999999999999999999999996543210 01245
Q ss_pred HHHHHHHHHHHcCC--EEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecC
Q 021871 251 LAQRYEQLYQQNGV--KFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPY 304 (306)
Q Consensus 251 ~~~~~~~~~~~~gv--~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g 304 (306)
+.+.+.+.+++.++ ++.++++|++++..+++....|++.+|+++.+|.||+|||
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG 156 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAG 156 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCC
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcC
Confidence 66777888888888 8999999999987555433468999998999999999999
No 198
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.58 E-value=3.8e-07 Score=83.93 Aligned_cols=98 Identities=17% Similarity=0.213 Sum_probs=76.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccccc------------------------------------------
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------------------------------------------ 245 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~------------------------------------------ 245 (306)
-.|+|||+|..|+-.|..+++.+.+|+++++.+.....
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~~ 201 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQNDI 201 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 36999999999999999999999999999887532110
Q ss_pred ---------------------------------------------ccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCC
Q 021871 246 ---------------------------------------------LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSD 280 (306)
Q Consensus 246 ---------------------------------------------~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~ 280 (306)
.....+...+.+.+++.||+++++++|+++..+++
T Consensus 202 ~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~ 281 (566)
T 1qo8_A 202 KLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDD 281 (566)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTT
T ss_pred HHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCC
Confidence 00123446677778888999999999999987432
Q ss_pred CcEEEEEeC--CCC--EEecCEEEEecCC
Q 021871 281 GRVAAVKLE--DGS--TIDADTVILLPYD 305 (306)
Q Consensus 281 ~~v~~v~~~--~G~--~i~~d~vv~a~g~ 305 (306)
+++.+|.+. +|+ .+.+|.||+|||.
T Consensus 282 g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg 310 (566)
T 1qo8_A 282 HSVVGAVVHGKHTGYYMIGAKSVVLATGG 310 (566)
T ss_dssp SBEEEEEEEETTTEEEEEEEEEEEECCCC
T ss_pred CcEEEEEEEeCCCcEEEEEcCEEEEecCC
Confidence 777677665 675 6899999999985
No 199
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.58 E-value=8.1e-08 Score=84.88 Aligned_cols=98 Identities=17% Similarity=0.199 Sum_probs=77.2
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.++|+|||||+.|+.+|..|.+.|. +|+++++.+...- .. .+ ......+.+.+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~---~Vtvv~~~~~~l~-------~~-~~----------------~~~~~~l~~~l 195 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGL---SVTILEAGDELLV-------RV-LG----------------RRIGAWLRGLL 195 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSSH-------HH-HC----------------HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC---eEEEEecCCccch-------hh-cC----------------HHHHHHHHHHH
Confidence 5799999999999999999999997 9999998765310 00 00 00013456667
Q ss_pred hhcCeEEEeCCcEEEEeCCCC--EEEcCCCcEEecCcEEEeeCCCCc
Q 021871 131 KEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~~--~v~~~~g~~~~~~~lila~G~~~~ 175 (306)
++.|+++++++.|.++..++. .+.+.+|+.+.+|.+|+|+|..++
T Consensus 196 ~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~ 242 (410)
T 3ef6_A 196 TELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEPA 242 (410)
T ss_dssp HHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEEC
T ss_pred HHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCeec
Confidence 889999999999999987644 688889999999999999998765
No 200
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.57 E-value=6.5e-08 Score=90.32 Aligned_cols=36 Identities=28% Similarity=0.402 Sum_probs=33.1
Q ss_pred CCcEEEEcCChHHHHHHHHHHH-cCCCCCcEEEeccCCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVE-HGMADGRLCIVSKEAYA 89 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~-~g~~~~~V~vie~~~~~ 89 (306)
.+||+|||||++||++|..|++ .|+ +|+|+|+.+..
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~---~V~viEr~~~~ 68 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDI---RTCIVEQKEGP 68 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTS---CEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCC---CEEEEeCCCCC
Confidence 5799999999999999999999 898 99999998653
No 201
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.56 E-value=2.2e-07 Score=82.22 Aligned_cols=98 Identities=13% Similarity=0.197 Sum_probs=76.8
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.++++|||+|+.|+.+|..|.+.|. +|+++++.+...-. .. + ......+.+.+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~---~Vtvv~~~~~~l~~-------~~-~----------------~~~~~~l~~~l 204 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGV---NVTLLEALPRVLAR-------VA-G----------------EALSEFYQAEH 204 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSTTTT-------TS-C----------------HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCC---eEEEEecCCchhhh-------hc-C----------------HHHHHHHHHHH
Confidence 5789999999999999999999997 99999987653100 00 0 00013455667
Q ss_pred hhcCeEEEeCCcEEEEeCCC-C--EEEcCCCcEEecCcEEEeeCCCCc
Q 021871 131 KEKGIEMIYQDPVTSIDIEK-Q--TLITNSGKLLKYGSLIVATGCTAS 175 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~-~--~v~~~~g~~~~~~~lila~G~~~~ 175 (306)
++.|+++++++.|.++..++ . .+.+++|+.+.+|.+|+|+|..|+
T Consensus 205 ~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~ 252 (415)
T 3lxd_A 205 RAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPC 252 (415)
T ss_dssp HHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEES
T ss_pred HhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccC
Confidence 88999999999999998654 2 578888989999999999998876
No 202
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.56 E-value=1.9e-07 Score=84.72 Aligned_cols=98 Identities=15% Similarity=0.197 Sum_probs=76.6
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.++++|||||+.|+.+|..|++.|. +|+++++.+... . . ++ .+....+.+.+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~~l-~--~------~d----------------~~~~~~l~~~l 227 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGI---DSYIFARGNRIL-R--K------FD----------------ESVINVLENDM 227 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTC---EEEEECSSSSSC-T--T------SC----------------HHHHHHHHHHH
T ss_pred CCeEEEECChHHHHHHHHHHHHcCC---eEEEEecCCccC-c--c------cc----------------hhhHHHHHHHH
Confidence 5799999999999999999999997 999999876531 0 0 00 00013456678
Q ss_pred hhcCeEEEeCCcEEEEeCCC---CEEEcCCCcE-EecCcEEEeeCCCCcc
Q 021871 131 KEKGIEMIYQDPVTSIDIEK---QTLITNSGKL-LKYGSLIVATGCTASR 176 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~---~~v~~~~g~~-~~~~~lila~G~~~~~ 176 (306)
++.|+++++++++.+++.+. ..+.+++|+. +.+|.+++|+|..|+.
T Consensus 228 ~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 228 KKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp HHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred HhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 88999999999999997642 3677778877 9999999999988764
No 203
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.55 E-value=5.5e-07 Score=83.40 Aligned_cols=56 Identities=16% Similarity=0.144 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEe---CCCC--EEecCEEEEecCC
Q 021871 249 PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL---EDGS--TIDADTVILLPYD 305 (306)
Q Consensus 249 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~---~~G~--~i~~d~vv~a~g~ 305 (306)
..+...+.+.+.+.||+++.++.|.++.. +++++.+|.. .+|+ .+.++.||+|||-
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 215 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLM-ENGECRGVIALCIEDGTIHRFRAKNTVIATGG 215 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEE-ECCEEEEEEEEEcCCCcEEEEEcCeEEECCCc
Confidence 46777788888889999999999999986 4677777765 4675 6889999999984
No 204
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.55 E-value=8.7e-08 Score=85.85 Aligned_cols=99 Identities=15% Similarity=0.256 Sum_probs=73.8
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
..++|+|||||+.|+.+|..|++.|. +|+++++.+...- . ++ ......+.+.
T Consensus 169 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l~---~------~~----------------~~~~~~l~~~ 220 (455)
T 1ebd_A 169 VPKSLVVIGGGYIGIELGTAYANFGT---KVTILEGAGEILS---G------FE----------------KQMAAIIKKR 220 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSST---T------SC----------------HHHHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC---cEEEEEcCCcccc---c------cC----------------HHHHHHHHHH
Confidence 35799999999999999999999997 9999998755310 0 00 0001345566
Q ss_pred HhhcCeEEEeCCcEEEEeCCCC--EEEcC---CCcEEecCcEEEeeCCCCcc
Q 021871 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITN---SGKLLKYGSLIVATGCTASR 176 (306)
Q Consensus 130 ~~~~~v~~~~~~~v~~v~~~~~--~v~~~---~g~~~~~~~lila~G~~~~~ 176 (306)
+++.|++++++++|.+++.++. .+.+. ++..+.+|.+++|+|..|+.
T Consensus 221 l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~ 272 (455)
T 1ebd_A 221 LKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNT 272 (455)
T ss_dssp HHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEESC
T ss_pred HHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCccc
Confidence 7889999999999999986543 33433 34579999999999988763
No 205
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.54 E-value=1.7e-07 Score=84.58 Aligned_cols=99 Identities=16% Similarity=0.211 Sum_probs=76.6
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
...+++|||||..|+.+|..|.+.|. +|+++++.+...- . ++ . .....+.+.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~~l~---~------~d-----~-----------~~~~~l~~~ 235 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHGLGS---ETHLVIRGETVLR---K------FD-----E-----------CIQNTITDH 235 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTC---EEEEECSSSSSCT---T------SC-----H-----------HHHHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---ceEEEEeCCcccc---c------cC-----H-----------HHHHHHHHH
Confidence 35799999999999999999999997 9999998765310 0 00 0 001345666
Q ss_pred HhhcCeEEEeCCcEEEEeCC--C--CEEEcCCC-cEEecCcEEEeeCCCCcc
Q 021871 130 YKEKGIEMIYQDPVTSIDIE--K--QTLITNSG-KLLKYGSLIVATGCTASR 176 (306)
Q Consensus 130 ~~~~~v~~~~~~~v~~v~~~--~--~~v~~~~g-~~~~~~~lila~G~~~~~ 176 (306)
+++.|++++++++|.+++.+ . ..+.+++| ..+.+|.+++|+|..|+.
T Consensus 236 l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 236 YVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp HHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred HHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 78889999999999999764 2 36777888 789999999999987764
No 206
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.54 E-value=9.6e-07 Score=76.58 Aligned_cols=94 Identities=17% Similarity=0.278 Sum_probs=73.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCC-cEEEEecCCcccc---------------------c--------------------
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENHLLQ---------------------R-------------------- 245 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~-~v~~~~~~~~~~~---------------------~-------------------- 245 (306)
.+|+|||+|..|+..|..|++.+. +|+++.+.+ +.. .
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 83 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEE 83 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCCS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhcccccccccccccc
Confidence 369999999999999999999998 999999875 100 0
Q ss_pred -ccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 246 -LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 246 -~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
.....+...+.+.+++.|++++.+++|.+++.. ++.+ .|.+.+| .+.+|.||+|||.
T Consensus 84 ~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~-~~~~-~v~~~~g-~~~~d~vVlAtG~ 141 (369)
T 3d1c_A 84 HISGETYAEYLQVVANHYELNIFENTVVTNISAD-DAYY-TIATTTE-TYHADYIFVATGD 141 (369)
T ss_dssp SCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEEC-SSSE-EEEESSC-CEEEEEEEECCCS
T ss_pred CCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEC-CCeE-EEEeCCC-EEEeCEEEECCCC
Confidence 001345566677778889999999999999974 3333 4777776 7999999999995
No 207
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.54 E-value=1.8e-07 Score=86.53 Aligned_cols=97 Identities=19% Similarity=0.312 Sum_probs=77.5
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.++++|||||..|+.+|..|.+.|. +|+++++.+...-. .. ......+.+.+
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l~~---~~----------------------~~~~~~l~~~l 238 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGI---EVTLVEMANQVMPP---ID----------------------YEMAAYVHEHM 238 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSCTT---SC----------------------HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC---eEEEEecCCccccc---CC----------------------HHHHHHHHHHH
Confidence 5799999999999999999999997 99999987542100 00 00013456677
Q ss_pred hhcCeEEEeCCcEEEEeCCCCEEEcCCCcEEecCcEEEeeCCCCc
Q 021871 131 KEKGIEMIYQDPVTSIDIEKQTLITNSGKLLKYGSLIVATGCTAS 175 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~~~v~~~~g~~~~~~~lila~G~~~~ 175 (306)
++.|+++++++.|.+++.....+.+.+++.+.+|.+|+|+|..++
T Consensus 239 ~~~GV~i~~~~~v~~i~~~~~~v~~~~g~~i~~D~Vi~a~G~~p~ 283 (588)
T 3ics_A 239 KNHDVELVFEDGVDALEENGAVVRLKSGSVIQTDMLILAIGVQPE 283 (588)
T ss_dssp HHTTCEEECSCCEEEEEGGGTEEEETTSCEEECSEEEECSCEEEC
T ss_pred HHcCCEEEECCeEEEEecCCCEEEECCCCEEEcCEEEEccCCCCC
Confidence 889999999999999987666788888889999999999997765
No 208
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.54 E-value=9.2e-07 Score=74.83 Aligned_cols=94 Identities=17% Similarity=0.283 Sum_probs=73.9
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCC-cEEEEecCCc---c--------ccc----ccCHHHHHHHHHHHHHcCCEEEcCceE
Q 021871 209 KVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENH---L--------LQR----LFTPSLAQRYEQLYQQNGVKFVKGASI 272 (306)
Q Consensus 209 ~v~viG~g~~a~e~a~~l~~~~~-~v~~~~~~~~---~--------~~~----~~~~~~~~~~~~~~~~~gv~i~~~~~v 272 (306)
+|+|||+|+.|+..|..|++.+. +|+++.+... + .+. .....+.+.+.+.+++.|++++. ++|
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v 81 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM-TAV 81 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-SCE
T ss_pred eEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-EEE
Confidence 68999999999999999999999 9999988521 0 111 11246677778888888999998 689
Q ss_pred EEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 273 KNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 273 ~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
..++.. ++.+ .|.+.+|+.+.+|.+|+|||.
T Consensus 82 ~~i~~~-~~~~-~v~~~~g~~~~~~~vv~AtG~ 112 (311)
T 2q0l_A 82 QRVSKK-DSHF-VILAEDGKTFEAKSVIIATGG 112 (311)
T ss_dssp EEEEEE-TTEE-EEEETTSCEEEEEEEEECCCE
T ss_pred EEEEEc-CCEE-EEEEcCCCEEECCEEEECCCC
Confidence 999863 4433 477788889999999999984
No 209
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.52 E-value=1.1e-06 Score=74.32 Aligned_cols=96 Identities=18% Similarity=0.227 Sum_probs=74.9
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCC--ccc-----------ccccCHHHHHHHHHHHHHcCCEEEcCceEEEE
Q 021871 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN--HLL-----------QRLFTPSLAQRYEQLYQQNGVKFVKGASIKNL 275 (306)
Q Consensus 209 ~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~--~~~-----------~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i 275 (306)
+|+|||+|+.|+..|..+++.+.+++++.+.. .+. +....+.+...+.+.+++.|++++.+++|+.+
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i 82 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKL 82 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEE
Confidence 58999999999999999999999999996531 111 00012467777888888899999999999999
Q ss_pred EeCCC--CcEEEEEeCCCCEEecCEEEEecCC
Q 021871 276 EAGSD--GRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 276 ~~~~~--~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
....+ +.+ .|.+.+|+.+.+|.+|+|||.
T Consensus 83 ~~~~~~~~~~-~v~~~~g~~~~~~~lv~AtG~ 113 (310)
T 1fl2_A 83 IPAAVEGGLH-QIETASGAVLKARSIIVATGA 113 (310)
T ss_dssp ECCSSTTCCE-EEEETTSCEEEEEEEEECCCE
T ss_pred EecccCCceE-EEEECCCCEEEeCEEEECcCC
Confidence 75322 233 588888889999999999984
No 210
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.52 E-value=2.4e-07 Score=83.80 Aligned_cols=98 Identities=18% Similarity=0.251 Sum_probs=76.6
Q ss_pred CCcEEEEcCChHHHHHHHHHHHc---CCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCCh
Q 021871 51 NREFVIVGGGNAAGYAARTFVEH---GMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~---g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (306)
..+++|||||..|+.+|..|.+. |. +|+++++.+... . . ++ ......+.
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~---~Vtlv~~~~~~l-~--~------~d----------------~~~~~~l~ 238 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGG---QVDLAYRGDMIL-R--G------FD----------------SELRKQLT 238 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTC---EEEEEESSSSSS-T--T------SC----------------HHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcC---eEEEEEcCCCcc-c--c------cC----------------HHHHHHHH
Confidence 57999999999999999999999 87 999999876521 0 0 00 00023456
Q ss_pred hHHhhcCeEEEeCCcEEEEeCCC---CEEEcCCCcEEecCcEEEeeCCCCcc
Q 021871 128 EWYKEKGIEMIYQDPVTSIDIEK---QTLITNSGKLLKYGSLIVATGCTASR 176 (306)
Q Consensus 128 ~~~~~~~v~~~~~~~v~~v~~~~---~~v~~~~g~~~~~~~lila~G~~~~~ 176 (306)
+.+++.|+++++++.|.++..++ ..+.+++|+.+.+|.+++|+|..|+.
T Consensus 239 ~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 239 EQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp HHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred HHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCc
Confidence 67788999999999999998653 36777888889999999999988764
No 211
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.52 E-value=1.3e-07 Score=85.38 Aligned_cols=98 Identities=12% Similarity=0.134 Sum_probs=74.8
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.++++|||||+.|+.+|..|++.|. +|+++++.+...- . ++ .+....+.+.+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~---~Vtlv~~~~~~l~---~------~~----------------~~~~~~l~~~l 236 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGS---RLDVVEMMDGLMQ---G------AD----------------RDLVKVWQKQN 236 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTC---EEEEECSSSSSST---T------SC----------------HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC---eEEEEEECCcccc---c------cC----------------HHHHHHHHHHH
Confidence 5799999999999999999999997 9999998765310 0 00 00013456677
Q ss_pred hhcCeEEEeCCcEEEEeCCCC--EEEcCC----CcEEecCcEEEeeCCCCcc
Q 021871 131 KEKGIEMIYQDPVTSIDIEKQ--TLITNS----GKLLKYGSLIVATGCTASR 176 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~~--~v~~~~----g~~~~~~~lila~G~~~~~ 176 (306)
++.|++++++++|.+++.++. .+.+.+ ++.+.+|.+++|+|..|+.
T Consensus 237 ~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 237 EYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp GGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECG
T ss_pred HhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCC
Confidence 888999999999999976543 455555 6678999999999988763
No 212
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.52 E-value=2.4e-07 Score=83.85 Aligned_cols=98 Identities=18% Similarity=0.290 Sum_probs=76.5
Q ss_pred CCcEEEEcCChHHHHHHHHHHHc---CCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCCh
Q 021871 51 NREFVIVGGGNAAGYAARTFVEH---GMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTP 127 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~---g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (306)
..+++|||||..|+.+|..|.+. |. +|+++++.+... . . ++ .+....+.
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~---~Vtlv~~~~~~l-~--~------~d----------------~~~~~~l~ 242 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGG---KVTLCYRNNLIL-R--G------FD----------------ETIREEVT 242 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTC---EEEEEESSSSSC-T--T------SC----------------HHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCC---eEEEEEcCCccc-c--c------cC----------------HHHHHHHH
Confidence 57999999999999999999999 87 999999876531 0 0 00 00013456
Q ss_pred hHHhhcCeEEEeCCcEEEEeCCC---CEEEcCCCcEEecCcEEEeeCCCCcc
Q 021871 128 EWYKEKGIEMIYQDPVTSIDIEK---QTLITNSGKLLKYGSLIVATGCTASR 176 (306)
Q Consensus 128 ~~~~~~~v~~~~~~~v~~v~~~~---~~v~~~~g~~~~~~~lila~G~~~~~ 176 (306)
+.+++.|++++++++|.+++.++ ..+.+.+|+.+.+|.+++|+|..|+.
T Consensus 243 ~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 243 KQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp HHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccc
Confidence 67888999999999999997653 36777888889999999999987763
No 213
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.52 E-value=9.9e-07 Score=81.29 Aligned_cols=98 Identities=19% Similarity=0.147 Sum_probs=76.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccccc------------------------------------------
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------------------------------------------ 245 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~------------------------------------------ 245 (306)
..|+|||+|..|+..|..+++.+.+|+++++.+.....
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~~ 206 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNINDP 206 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 47999999999999999999999999999887543210
Q ss_pred ---------------------------------------------ccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCC
Q 021871 246 ---------------------------------------------LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSD 280 (306)
Q Consensus 246 ---------------------------------------------~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~ 280 (306)
.....+...+.+.+++.||+|+++++|+++..+++
T Consensus 207 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~ 286 (571)
T 1y0p_A 207 ALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDK 286 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECTT
T ss_pred HHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCC
Confidence 00124455677778888999999999999987444
Q ss_pred CcEEEEEeC--CCC--EEecCEEEEecCC
Q 021871 281 GRVAAVKLE--DGS--TIDADTVILLPYD 305 (306)
Q Consensus 281 ~~v~~v~~~--~G~--~i~~d~vv~a~g~ 305 (306)
+++.+|... +|+ ++.+|.||+|||.
T Consensus 287 g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg 315 (571)
T 1y0p_A 287 GTVKGILVKGMYKGYYWVKADAVILATGG 315 (571)
T ss_dssp SCEEEEEEEETTTEEEEEECSEEEECCCC
T ss_pred CeEEEEEEEeCCCcEEEEECCeEEEeCCC
Confidence 777677665 575 6899999999985
No 214
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.51 E-value=6.4e-08 Score=86.07 Aligned_cols=94 Identities=22% Similarity=0.331 Sum_probs=70.7
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCC--CcEEEEecCCcccccccCH----------HHHHHHHHHHHHcCCEEEcCceEEE
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENHLLQRLFTP----------SLAQRYEQLYQQNGVKFVKGASIKN 274 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~--~~v~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~gv~i~~~~~v~~ 274 (306)
.++|+|||+|..|+..|..|.+.+ .+|+++.+.+.+.-...-+ ++...+.+.+++.||+++.+ +|++
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~v~~ 80 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAES 80 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEE
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe-EEEE
Confidence 368999999999999999998765 6799999987643210111 11112345567789999987 7999
Q ss_pred EEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 275 LEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 275 i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
|+. +++ .|++++|+++++|.+|+|||.
T Consensus 81 Id~--~~~--~V~~~~g~~i~YD~LViAtG~ 107 (430)
T 3hyw_A 81 IDP--DAN--TVTTQSGKKIEYDYLVIATGP 107 (430)
T ss_dssp EET--TTT--EEEETTCCEEECSEEEECCCC
T ss_pred EEC--CCC--EEEECCCCEEECCEEEEeCCC
Confidence 995 333 488999999999999999995
No 215
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.51 E-value=2.7e-07 Score=81.30 Aligned_cols=98 Identities=18% Similarity=0.217 Sum_probs=76.2
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.++++|||+|+.|+.+|..|.+.|. +|+++++.+...-. .. + ......+.+.+
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~---~Vtvv~~~~~~~~~-------~~-~----------------~~~~~~l~~~l 194 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGL---EVDVVELAPRVMAR-------VV-T----------------PEISSYFHDRH 194 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSTTTT-------TS-C----------------HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC---EEEEEeCCCcchhh-------cc-C----------------HHHHHHHHHHH
Confidence 5789999999999999999999997 99999987553100 00 0 00013456667
Q ss_pred hhcCeEEEeCCcEEEEeCCCC---EEEcCCCcEEecCcEEEeeCCCCc
Q 021871 131 KEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTAS 175 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~~---~v~~~~g~~~~~~~lila~G~~~~ 175 (306)
++.|+++++++.|.++..++. .+.+++|+.+.+|.+|+|+|..++
T Consensus 195 ~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~ 242 (404)
T 3fg2_P 195 SGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPN 242 (404)
T ss_dssp HHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred HhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccC
Confidence 889999999999999976543 477888989999999999998765
No 216
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.50 E-value=2.6e-07 Score=84.24 Aligned_cols=97 Identities=20% Similarity=0.229 Sum_probs=75.5
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHHh
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWYK 131 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (306)
++++|||||..|+.+|..|.+.|. +|+++++.+...-. ++ ......+.+.++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~---~Vtlv~~~~~~l~~---------~~----------------~~~~~~l~~~l~ 266 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGR---RTVMLVRTEPLKLI---------KD----------------NETRAYVLDRMK 266 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSCTTTTC---------CS----------------HHHHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCC---eEEEEEecCccccc---------cc----------------HHHHHHHHHHHH
Confidence 799999999999999999999997 99999987652100 00 000234566788
Q ss_pred hcCeEEEeCCcEEEEeC--CC----CEEEcCCCc-EEecCcEEEeeCCCCcc
Q 021871 132 EKGIEMIYQDPVTSIDI--EK----QTLITNSGK-LLKYGSLIVATGCTASR 176 (306)
Q Consensus 132 ~~~v~~~~~~~v~~v~~--~~----~~v~~~~g~-~~~~~~lila~G~~~~~ 176 (306)
+.|++++++++|.++.. +. ..+.+++|+ .+.+|.+|+|+|..|+.
T Consensus 267 ~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 267 EQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp HTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECC
T ss_pred hCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCC
Confidence 89999999999999976 33 346777777 89999999999988764
No 217
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.50 E-value=1.3e-06 Score=74.36 Aligned_cols=96 Identities=22% Similarity=0.208 Sum_probs=73.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCc---c--------ccc----ccCHHHHHHHHHHHHHcCCEEEcCceE
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH---L--------LQR----LFTPSLAQRYEQLYQQNGVKFVKGASI 272 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~---~--------~~~----~~~~~~~~~~~~~~~~~gv~i~~~~~v 272 (306)
.+|+|||+|+.|+..|..|++.+.+|+++.+... + .+. .....+.+.+.+.+++.|++++. .+|
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v 87 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM-DEV 87 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE-CCE
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe-eeE
Confidence 4799999999999999999999999999998721 0 011 01245677778888889999998 589
Q ss_pred EEEEeCC-CCc-EEEEEeCCCCEEecCEEEEecCC
Q 021871 273 KNLEAGS-DGR-VAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 273 ~~i~~~~-~~~-v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
.+++... ++. + .|.+.+|+.+.+|.+|+|||.
T Consensus 88 ~~i~~~~~~~~~~-~v~~~~g~~~~~~~vv~AtG~ 121 (325)
T 2q7v_A 88 QGVQHDATSHPYP-FTVRGYNGEYRAKAVILATGA 121 (325)
T ss_dssp EEEEECTTSSSCC-EEEEESSCEEEEEEEEECCCE
T ss_pred EEEEeccCCCceE-EEEECCCCEEEeCEEEECcCC
Confidence 9998641 222 3 466778889999999999984
No 218
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.50 E-value=1.1e-06 Score=77.32 Aligned_cols=97 Identities=14% Similarity=0.087 Sum_probs=76.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccc-----------------------------------------c--
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL-----------------------------------------Q-- 244 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~-----------------------------------------~-- 244 (306)
.+|+|||+|..|+.+|..|++.+.+|+++++.+... .
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 86 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL 86 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCCE
Confidence 469999999999999999999999999998865430 0
Q ss_pred --c--------------ccCHHHHHHHHHHHHHc-CCEEEcCceEEEEEeCCCCcEE-EEEeCCCCEEecCEEEEecCC
Q 021871 245 --R--------------LFTPSLAQRYEQLYQQN-GVKFVKGASIKNLEAGSDGRVA-AVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 245 --~--------------~~~~~~~~~~~~~~~~~-gv~i~~~~~v~~i~~~~~~~v~-~v~~~~G~~i~~d~vv~a~g~ 305 (306)
. .....+.+.+.+.+++. |++++.+++|++++.++ +.+. .|++.+|+++.+|.||.|+|.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~-~~v~g~v~~~~g~~~~ad~vV~AdG~ 164 (399)
T 2x3n_A 87 LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDE-RHAIDQVRLNDGRVLRPRVVVGADGI 164 (399)
T ss_dssp EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECT-TSCEEEEEETTSCEEEEEEEEECCCT
T ss_pred EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC-CceEEEEEECCCCEEECCEEEECCCC
Confidence 0 00124566677777777 99999999999999744 4442 588888989999999999985
No 219
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.50 E-value=1.1e-06 Score=73.61 Aligned_cols=95 Identities=15% Similarity=0.226 Sum_probs=73.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccc---------cc---ccCHHHHHHHHHHHHHc-CCEEEcCceEEE
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL---------QR---LFTPSLAQRYEQLYQQN-GVKFVKGASIKN 274 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~---------~~---~~~~~~~~~~~~~~~~~-gv~i~~~~~v~~ 274 (306)
.+|+|||+|..|+..|..|++.+.+|+++.+.+... +. .....+...+.+.+++. +++++.+ +|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~ 81 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEG-RVTD 81 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEES-CEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEe-EEEE
Confidence 469999999999999999999999999999753211 10 11235667777777776 7888765 8999
Q ss_pred EEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 275 LEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 275 i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
++.. ++.+ .|.+.+|+++.+|.+|+|||.
T Consensus 82 i~~~-~~~~-~v~~~~g~~~~~d~vviAtG~ 110 (297)
T 3fbs_A 82 AKGS-FGEF-IVEIDGGRRETAGRLILAMGV 110 (297)
T ss_dssp EEEE-TTEE-EEEETTSCEEEEEEEEECCCC
T ss_pred EEEc-CCeE-EEEECCCCEEEcCEEEECCCC
Confidence 9874 3333 588899988999999999995
No 220
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.49 E-value=8.6e-07 Score=75.78 Aligned_cols=94 Identities=16% Similarity=0.185 Sum_probs=73.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEec----CCccc------------cc----ccCHHHHHHHHHHHHHcCCEEE
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFP----ENHLL------------QR----LFTPSLAQRYEQLYQQNGVKFV 267 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~----~~~~~------------~~----~~~~~~~~~~~~~~~~~gv~i~ 267 (306)
.+|+|||+|..|+.+|..|++.+.+|+++.+ ..... +. .....+...+.+.+++.|++++
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~ 88 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTIF 88 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEEE
Confidence 4799999999999999999999999999987 22111 11 1134677778888888999999
Q ss_pred cCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 268 KGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 268 ~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
.++ |..++.. ++.+ .|++ +|+++.+|.+|+|+|.
T Consensus 89 ~~~-v~~i~~~-~~~~-~v~~-~~~~~~~~~vv~A~G~ 122 (333)
T 1vdc_A 89 TET-VTKVDFS-SKPF-KLFT-DSKAILADAVILAIGA 122 (333)
T ss_dssp CCC-CCEEECS-SSSE-EEEC-SSEEEEEEEEEECCCE
T ss_pred EeE-EEEEEEc-CCEE-EEEE-CCcEEEcCEEEECCCC
Confidence 996 9999863 4443 4666 6778999999999984
No 221
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.48 E-value=5.7e-07 Score=82.27 Aligned_cols=97 Identities=13% Similarity=0.105 Sum_probs=77.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccccc------------------------------------ccCHHH
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------------------------------------LFTPSL 251 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~------------------------------------~~~~~~ 251 (306)
.+|+|||+|..|+.+|..|.+.+.+++++.+.+.+... ...+++
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ei 89 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEM 89 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHHH
Confidence 47999999999999999999999999999998643100 012466
Q ss_pred HHHHHHHHHHcCC--EEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecC
Q 021871 252 AQRYEQLYQQNGV--KFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPY 304 (306)
Q Consensus 252 ~~~~~~~~~~~gv--~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g 304 (306)
...+.+.+++.++ .+..+++|++++..+++....|++.+|+++.+|.||+|+|
T Consensus 90 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG 144 (545)
T 3uox_A 90 LRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATG 144 (545)
T ss_dssp HHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCC
T ss_pred HHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcC
Confidence 6777777888787 7899999999986544333368999998999999999999
No 222
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.48 E-value=3.5e-07 Score=81.32 Aligned_cols=98 Identities=15% Similarity=0.258 Sum_probs=75.0
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
..+|+|||||+.|+.+|..|.+.|. +|+++++.+...-. . .+ ......+...+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~---~Vtlv~~~~~~l~~-------~-~~----------------~~~~~~l~~~l 201 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANM---HVTLLDTAARVLER-------V-TA----------------PPVSAFYEHLH 201 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSTTTT-------T-SC----------------HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC---EEEEEEeCCccccc-------h-hh----------------HHHHHHHHHHH
Confidence 5799999999999999999999998 99999987542100 0 00 00013345667
Q ss_pred hhcCeEEEeCCcEEEEeC--C-CC--EEEcCCCcEEecCcEEEeeCCCCc
Q 021871 131 KEKGIEMIYQDPVTSIDI--E-KQ--TLITNSGKLLKYGSLIVATGCTAS 175 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~--~-~~--~v~~~~g~~~~~~~lila~G~~~~ 175 (306)
++.|+++++++.+.+++. + +. .+.+.+|..+.+|.+|+|+|..|+
T Consensus 202 ~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~ 251 (431)
T 1q1r_A 202 REAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPN 251 (431)
T ss_dssp HHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred HhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcC
Confidence 888999999999999975 3 33 577788888999999999997765
No 223
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.48 E-value=3e-07 Score=82.79 Aligned_cols=99 Identities=11% Similarity=0.141 Sum_probs=74.0
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.++++|||||+.|+.+|..|.+.|. +|+++++.+...-. . ++ .+....+.+.+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l~~--~---------------~~-------~~~~~~l~~~l 230 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGA---DVTAVEFLGHVGGV--G---------------ID-------MEISKNFQRIL 230 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSSCS--S---------------CC-------HHHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCC---EEEEEeccCccCCc--c---------------cC-------HHHHHHHHHHH
Confidence 4789999999999999999999997 99999987652100 0 00 00013456677
Q ss_pred hhcCeEEEeCCcEEEEeCCCC---EEE-----cCCCcEEecCcEEEeeCCCCcc
Q 021871 131 KEKGIEMIYQDPVTSIDIEKQ---TLI-----TNSGKLLKYGSLIVATGCTASR 176 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~~---~v~-----~~~g~~~~~~~lila~G~~~~~ 176 (306)
++.|++++++++|.+++.++. .+. ..++..+.+|.+++|+|..|+.
T Consensus 231 ~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 231 QKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFT 284 (474)
T ss_dssp HHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECC
T ss_pred HHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCC
Confidence 889999999999999986542 344 2456689999999999988763
No 224
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.48 E-value=6.8e-07 Score=81.67 Aligned_cols=35 Identities=20% Similarity=0.317 Sum_probs=32.1
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (306)
.+||+|||||++||++|+.|++ |. +|+|+||....
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~---~V~vlEk~~~~ 42 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QH---QVIVLSKGPVT 42 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TS---CEEEECSSCTT
T ss_pred CCCEEEECccHHHHHHHHHHhc-CC---cEEEEECCCCC
Confidence 4799999999999999999999 98 99999998653
No 225
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.48 E-value=1.9e-07 Score=84.11 Aligned_cols=98 Identities=17% Similarity=0.282 Sum_probs=73.9
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.++++|||||+.|+.+|..|++.|. +|+++++.+...-. ++ .+....+.+.+
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l~~---------~~----------------~~~~~~l~~~l 234 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGS---KVTVVEFQPQIGAS---------MD----------------GEVAKATQKFL 234 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSSSS---------SC----------------HHHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCC---EEEEEEeCCccccc---------cC----------------HHHHHHHHHHH
Confidence 5799999999999999999999997 99999987652100 00 00023456677
Q ss_pred hhcCeEEEeCCcEEEEeC--CCC--EEEcC-----CCcEEecCcEEEeeCCCCcc
Q 021871 131 KEKGIEMIYQDPVTSIDI--EKQ--TLITN-----SGKLLKYGSLIVATGCTASR 176 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~--~~~--~v~~~-----~g~~~~~~~lila~G~~~~~ 176 (306)
++.|++++++++|.+++. ++. .+.+. ++..+.+|.+++|+|..|+.
T Consensus 235 ~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 235 KKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp HHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECC
T ss_pred HHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCC
Confidence 889999999999999976 443 34443 34579999999999988764
No 226
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.46 E-value=4.6e-07 Score=81.93 Aligned_cols=98 Identities=16% Similarity=0.281 Sum_probs=74.3
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
..++|+|||||..|+.+|..|++.|. +|+++++.+...-. . ++ .+....+.+.
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~~l~~-------~-~~----------------~~~~~~l~~~ 245 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGK---EVVLIDVVDTCLAG-------Y-YD----------------RDLTDLMAKN 245 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSTTTT-------T-SC----------------HHHHHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCC---eEEEEEcccchhhh-------H-HH----------------HHHHHHHHHH
Confidence 45799999999999999999999997 99999987653100 0 00 0001345666
Q ss_pred HhhcCeEEEeCCcEEEEeCCCC--EEEcCCCcEEecCcEEEeeCCCCc
Q 021871 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (306)
Q Consensus 130 ~~~~~v~~~~~~~v~~v~~~~~--~v~~~~g~~~~~~~lila~G~~~~ 175 (306)
+++.|++++++++|.+++.++. .+.+ ++..+.+|.+++|+|..|+
T Consensus 246 l~~~GV~i~~~~~v~~i~~~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 246 MEEHGIQLAFGETVKEVAGNGKVEKIIT-DKNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp HHTTTCEEEETCCEEEEECSSSCCEEEE-SSCEEECSEEEECCCEEEC
T ss_pred HHhCCeEEEeCCEEEEEEcCCcEEEEEE-CCcEEECCEEEECCCCCcC
Confidence 7889999999999999986543 3555 5678999999999998776
No 227
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.46 E-value=2.7e-07 Score=82.86 Aligned_cols=98 Identities=18% Similarity=0.212 Sum_probs=73.9
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.++++|||||..|+.+|..|.+.|. +|+++++.+...- . ++ .+....+.+.+
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l~---~------~~----------------~~~~~~l~~~l 222 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGV---DVTIVEFLPRALP---N------ED----------------ADVSKEIEKQF 222 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSST---T------SC----------------HHHHHHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCC---eEEEEEcCCcccc---c------cC----------------HHHHHHHHHHH
Confidence 5799999999999999999999997 9999998754210 0 00 00013456677
Q ss_pred hhcCeEEEeCCcEEEEeCCCC--EEEcC-CC--cEEecCcEEEeeCCCCcc
Q 021871 131 KEKGIEMIYQDPVTSIDIEKQ--TLITN-SG--KLLKYGSLIVATGCTASR 176 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~~--~v~~~-~g--~~~~~~~lila~G~~~~~ 176 (306)
++.|+++++++++.++..++. .+.+. +| ..+.+|.+++|+|..|+.
T Consensus 223 ~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~ 273 (464)
T 2a8x_A 223 KKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNV 273 (464)
T ss_dssp HHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEECC
T ss_pred HHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccC
Confidence 888999999999999976543 34443 55 579999999999988763
No 228
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.46 E-value=1.4e-06 Score=78.11 Aligned_cols=96 Identities=15% Similarity=0.159 Sum_probs=73.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHh---CCCc---EEEEecCCcccccc-----------------------------------
Q 021871 208 KKVVVVGGGYIGMEVAAAAVG---WKLD---TTIIFPENHLLQRL----------------------------------- 246 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~---~~~~---v~~~~~~~~~~~~~----------------------------------- 246 (306)
++|+|||+|+.|+..|..|++ .+.+ |+++.+.+.+....
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 579999999999999999999 8988 99999876432100
Q ss_pred ----------------cCHHHHHHHHHHHHHcCCE--EEcCceEEEEEeCCCC-cEEEEEeCC---C--CEEecCEEEEe
Q 021871 247 ----------------FTPSLAQRYEQLYQQNGVK--FVKGASIKNLEAGSDG-RVAAVKLED---G--STIDADTVILL 302 (306)
Q Consensus 247 ----------------~~~~~~~~~~~~~~~~gv~--i~~~~~v~~i~~~~~~-~v~~v~~~~---G--~~i~~d~vv~a 302 (306)
....+.+.+.+.+++.|++ ++++++|+.++..+++ .+ .|++.+ | .++.+|.||+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~-~V~~~~~~~g~~~~~~~d~VVvA 161 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTF-TVTVQDHTTDTIYSEEFDYVVCC 161 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEE-EEEEEETTTTEEEEEEESEEEEC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcE-EEEEEEcCCCceEEEEcCEEEEC
Confidence 0134556677777888998 9999999999864332 33 455544 4 47899999999
Q ss_pred cC
Q 021871 303 PY 304 (306)
Q Consensus 303 ~g 304 (306)
||
T Consensus 162 tG 163 (464)
T 2xve_A 162 TG 163 (464)
T ss_dssp CC
T ss_pred CC
Confidence 99
No 229
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.46 E-value=3.6e-07 Score=83.28 Aligned_cols=97 Identities=10% Similarity=0.108 Sum_probs=75.4
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
.+.+++|||||..|+.+|..+++.|. +|+|+++..... ..+. +....+...
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~---~VTii~~~~~L~------------~~D~--------------ei~~~l~~~ 272 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGY---DVTVAVRSIVLR------------GFDQ--------------QCAVKVKLY 272 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTC---CEEEEESSCSST------------TSCH--------------HHHHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCC---eEEEeccccccc------------ccch--------------hHHHHHHHH
Confidence 35799999999999999999999998 999998643210 0000 002456677
Q ss_pred HhhcCeEEEeCCcEEEEeCCCC--EEEcCCCcEEecCcEEEeeCCCCc
Q 021871 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (306)
Q Consensus 130 ~~~~~v~~~~~~~v~~v~~~~~--~v~~~~g~~~~~~~lila~G~~~~ 175 (306)
+++.++.++++..+..+..... .+.+.++..+.+|.|++|+|-.|+
T Consensus 273 l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pn 320 (542)
T 4b1b_A 273 MEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGD 320 (542)
T ss_dssp HHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEES
T ss_pred HHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCC
Confidence 8889999999999999887554 456677888999999999997766
No 230
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.45 E-value=3.5e-07 Score=81.50 Aligned_cols=93 Identities=20% Similarity=0.297 Sum_probs=73.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHh---CCCcEEEEecCCcccccc----------cCHHHHHHHHHHHHHcCCEEEcCceEEE
Q 021871 208 KKVVVVGGGYIGMEVAAAAVG---WKLDTTIIFPENHLLQRL----------FTPSLAQRYEQLYQQNGVKFVKGASIKN 274 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~---~~~~v~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~gv~i~~~~~v~~ 274 (306)
++|+|||+|..|+..|..|++ .+.+|+++.+.+.+.... ....+...+.+.+++.||+++. .+|+.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~ 83 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIA-QSAEQ 83 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEEC-SCEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEE-eEEEE
Confidence 689999999999999999998 788999999988752210 1122333456777889999986 58999
Q ss_pred EEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 275 LEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 275 i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
++. ++. .|++++|+++.+|.+|+|||.
T Consensus 84 id~-~~~---~V~~~~g~~i~~d~lviAtG~ 110 (437)
T 3sx6_A 84 IDA-EAQ---NITLADGNTVHYDYLMIATGP 110 (437)
T ss_dssp EET-TTT---EEEETTSCEEECSEEEECCCC
T ss_pred EEc-CCC---EEEECCCCEEECCEEEECCCC
Confidence 985 333 477889988999999999995
No 231
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.44 E-value=4.4e-07 Score=82.27 Aligned_cols=98 Identities=12% Similarity=0.236 Sum_probs=76.1
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
..+++|||||+.|+.+|..|.+.|. +|+++++.+...- . ++ ......+.+.+
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~~l~---~------~d----------------~~~~~~l~~~l 233 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGV---PVTVVASQDHVLP---Y------ED----------------ADAALVLEESF 233 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTC---CEEEECSSSSSSC---C------SS----------------HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC---eEEEEEcCCcccc---c------cC----------------HHHHHHHHHHH
Confidence 5789999999999999999999997 9999998765310 0 00 00023456677
Q ss_pred hhcCeEEEeCCcEEEEeCCCC--EEEcCCCcEEecCcEEEeeCCCCcc
Q 021871 131 KEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASR 176 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~~--~v~~~~g~~~~~~~lila~G~~~~~ 176 (306)
++.|+++++++.|.++..++. .+.+.++..+.+|.+|+|+|..|+.
T Consensus 234 ~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 234 AERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp HHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 889999999999999986543 4566677789999999999988764
No 232
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.43 E-value=3.4e-06 Score=72.07 Aligned_cols=94 Identities=13% Similarity=0.124 Sum_probs=69.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccc-------------------cCHHHHHHH-------------
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL-------------------FTPSLAQRY------------- 255 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~-------------------~~~~~~~~~------------- 255 (306)
.+|+|||+|.+|+.+|..|++.+.+|+++++.+...... ..+.+.+.+
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeecc
Confidence 469999999999999999999999999999886431100 012222222
Q ss_pred ------------------------------HHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEe-cCEEEEecC
Q 021871 256 ------------------------------EQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTID-ADTVILLPY 304 (306)
Q Consensus 256 ------------------------------~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~-~d~vv~a~g 304 (306)
.+.+. .|++++++++|++++.++ +.+ .|++.+|+.+. +|.||.|+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~~~-~~~-~v~~~~g~~~~~a~~vV~a~g 159 (336)
T 1yvv_A 83 PLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFRGE-EHW-NLLDAEGQNHGPFSHVIIATP 159 (336)
T ss_dssp CCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEECS-SCE-EEEETTSCEEEEESEEEECSC
T ss_pred ccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEEeC-CEE-EEEeCCCcCccccCEEEEcCC
Confidence 22222 389999999999999754 444 58889997764 999999987
No 233
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.42 E-value=2.6e-06 Score=71.94 Aligned_cols=96 Identities=10% Similarity=0.068 Sum_probs=68.6
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcc----------c--ccccCHHHHHHHHHHHHHcCCEEEcCceEEEEE
Q 021871 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL----------L--QRLFTPSLAQRYEQLYQQNGVKFVKGASIKNLE 276 (306)
Q Consensus 209 ~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~----------~--~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~ 276 (306)
.|+|||+|+.|+..|..+++.+.+|+++.+...- . +...++.+.+...+.+.+.+...+....+..+.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMIT 87 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEee
Confidence 5899999999999999999999999999875321 0 011124555555555555554444444566666
Q ss_pred eCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 277 AGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 277 ~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
..+++.. .+.+.+|+++.+|.+|+|||.
T Consensus 88 ~~~~~~~-~v~~~~g~~~~a~~liiATGs 115 (304)
T 4fk1_A 88 KQSTGLF-EIVTKDHTKYLAERVLLATGM 115 (304)
T ss_dssp ECTTSCE-EEEETTCCEEEEEEEEECCCC
T ss_pred ecCCCcE-EEEECCCCEEEeCEEEEccCC
Confidence 5455554 688999999999999999995
No 234
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.42 E-value=4.6e-07 Score=81.51 Aligned_cols=98 Identities=15% Similarity=0.175 Sum_probs=75.3
Q ss_pred CCcEEEEcCChHHHHHHHHHHHc-CCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEH-GMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~-g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
..+++|||+|..|+.+|..|.+. |. +|+++++.+...-. .. + ......+.+.
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~---~Vtlv~~~~~~l~~-------~~-~----------------~~~~~~l~~~ 211 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGI---DTTVVELADQIMPG-------FT-S----------------KSLSQMLRHD 211 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCC---EEEEECSSSSSSTT-------TS-C----------------HHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCC---cEEEEEccCccccc-------cc-C----------------HHHHHHHHHH
Confidence 57999999999999999999999 97 99999987542100 00 0 0002345667
Q ss_pred HhhcCeEEEeCCcEEEEeCCCC--EEEcCCCcEEecCcEEEeeCCCCc
Q 021871 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (306)
Q Consensus 130 ~~~~~v~~~~~~~v~~v~~~~~--~v~~~~g~~~~~~~lila~G~~~~ 175 (306)
+++.|++++.+++|.+++.++. .+.+.+|+.+.+|.+|+|+|..++
T Consensus 212 l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~ 259 (472)
T 3iwa_A 212 LEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPN 259 (472)
T ss_dssp HHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEEC
T ss_pred HHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCcC
Confidence 7889999999999999987433 466778889999999999998765
No 235
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.41 E-value=1.1e-06 Score=78.69 Aligned_cols=98 Identities=13% Similarity=0.139 Sum_probs=74.5
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.++++|||||..|+.+|..|.+.|. +|+++++.+...-. . ++ ......+.+.+
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l~~-------~-~d----------------~~~~~~l~~~l 199 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKK---TVHVFESLENLLPK-------Y-FD----------------KEMVAEVQKSL 199 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSSTT-------T-CC----------------HHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC---eEEEEEccCccccc-------c-CC----------------HHHHHHHHHHH
Confidence 5789999999999999999999997 99999987653100 0 00 00023456677
Q ss_pred hhcCeEEEeCCcEEEEeCCC-C-EEEcCCCcEEecCcEEEeeCCCCcc
Q 021871 131 KEKGIEMIYQDPVTSIDIEK-Q-TLITNSGKLLKYGSLIVATGCTASR 176 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~-~-~v~~~~g~~~~~~~lila~G~~~~~ 176 (306)
++.|+++++++.|.++...+ . .+.++++ .+.+|.+++|+|..|+.
T Consensus 200 ~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~~ 246 (452)
T 3oc4_A 200 EKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLHPQL 246 (452)
T ss_dssp HTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCBCCC
T ss_pred HHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCCCCh
Confidence 88999999999999998433 3 3666666 89999999999988763
No 236
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.41 E-value=4e-07 Score=82.12 Aligned_cols=97 Identities=18% Similarity=0.270 Sum_probs=73.4
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
..++|+|||||++|+.+|..|.+.|. +|+++++.+...- .++ ......+.+.
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l~---------~~~----------------~~~~~~l~~~ 236 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGK---KVRMIERNDHIGT---------IYD----------------GDMAEYIYKE 236 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTC---EEEEECCGGGTTS---------SSC----------------HHHHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCC---eEEEEEeCCchhh---------cCC----------------HHHHHHHHHH
Confidence 45799999999999999999999997 9999998754210 000 0001345666
Q ss_pred HhhcCeEEEeCCcEEEEeCCCCE--EEcCCCcEEecCcEEEeeCCCCc
Q 021871 130 YKEKGIEMIYQDPVTSIDIEKQT--LITNSGKLLKYGSLIVATGCTAS 175 (306)
Q Consensus 130 ~~~~~v~~~~~~~v~~v~~~~~~--v~~~~g~~~~~~~lila~G~~~~ 175 (306)
+++.|++++++++|.+++.++.. +.++ +..+.+|.+++|+|..++
T Consensus 237 l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~-~~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 237 ADKHHIEILTNENVKAFKGNERVEAVETD-KGTYKADLVLVSVGVKPN 283 (480)
T ss_dssp HHHTTCEEECSCCEEEEEESSBEEEEEET-TEEEECSEEEECSCEEES
T ss_pred HHHcCcEEEcCCEEEEEEcCCcEEEEEEC-CCEEEcCEEEECcCCCcC
Confidence 78899999999999999876432 4444 457999999999998765
No 237
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.41 E-value=4.7e-07 Score=81.39 Aligned_cols=99 Identities=13% Similarity=0.182 Sum_probs=73.5
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
...+++|||||+.|+.+|..|.+.|. +|+++++.+...- . ++ .+....+.+.
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l~---~------~d----------------~~~~~~l~~~ 224 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLGA---EVTVVEFAPRCAP---T------LD----------------EDVTNALVGA 224 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSST---T------SC----------------HHHHHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHhCC---EEEEEecCCcccc---c------CC----------------HHHHHHHHHH
Confidence 35799999999999999999999997 9999998755310 0 00 0001345666
Q ss_pred H-hhcCeEEEeCCcEEEEeCCCC--EEEcC--CC--cEEecCcEEEeeCCCCcc
Q 021871 130 Y-KEKGIEMIYQDPVTSIDIEKQ--TLITN--SG--KLLKYGSLIVATGCTASR 176 (306)
Q Consensus 130 ~-~~~~v~~~~~~~v~~v~~~~~--~v~~~--~g--~~~~~~~lila~G~~~~~ 176 (306)
+ ++.|++++++++|.+++.++. .+.+. +| ..+.+|.+++|+|..|+.
T Consensus 225 l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 225 LAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFT 278 (468)
T ss_dssp HHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECC
T ss_pred HhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCC
Confidence 7 889999999999999986543 44543 55 579999999999988763
No 238
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.41 E-value=1.2e-06 Score=78.22 Aligned_cols=97 Identities=18% Similarity=0.129 Sum_probs=72.8
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCC--cEEEEecCCcccccc--------------------------------------
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWKL--DTTIIFPENHLLQRL-------------------------------------- 246 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~~--~v~~~~~~~~~~~~~-------------------------------------- 246 (306)
..+|+|||+|..|+..|..|++.+. +|+++.+.+.+....
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPLY 85 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCchh
Confidence 4689999999999999999999998 999999875331000
Q ss_pred ---------------------------cCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCC---CC---E
Q 021871 247 ---------------------------FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED---GS---T 293 (306)
Q Consensus 247 ---------------------------~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~---G~---~ 293 (306)
....+.+.+.+.+++.++.++++++|++++.. ++.+ .|++.+ |+ +
T Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~-~~~~-~V~~~~~~~G~~~~~ 163 (447)
T 2gv8_A 86 RDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKK-DGSW-VVTYKGTKAGSPISK 163 (447)
T ss_dssp TTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEE-TTEE-EEEEEESSTTCCEEE
T ss_pred hhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeC-CCeE-EEEEeecCCCCeeEE
Confidence 01134555666666667889999999999863 4444 465554 76 7
Q ss_pred EecCEEEEecCC
Q 021871 294 IDADTVILLPYD 305 (306)
Q Consensus 294 i~~d~vv~a~g~ 305 (306)
+.+|.||+|+|.
T Consensus 164 ~~~d~VVvAtG~ 175 (447)
T 2gv8_A 164 DIFDAVSICNGH 175 (447)
T ss_dssp EEESEEEECCCS
T ss_pred EEeCEEEECCCC
Confidence 999999999996
No 239
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.41 E-value=6e-07 Score=81.02 Aligned_cols=98 Identities=20% Similarity=0.337 Sum_probs=76.3
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.++++|||+|+.|+.+|..|.+.|. +|+++++.+...-. ++ + .....+.+.+
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~---~Vtli~~~~~~l~~---------~~--------~--------~~~~~l~~~l 242 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGV---KTTLLHRGDLILRN---------FD--------Y--------DLRQLLNDAM 242 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSSTT---------SC--------H--------HHHHHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCC---eEEEEECCCccccc---------cC--------H--------HHHHHHHHHH
Confidence 5799999999999999999999997 99999987653100 00 0 0023456667
Q ss_pred hhcCeEEEeCCcEEEEeCCCC--EEEcCCCcEEecCcEEEeeCCCCcc
Q 021871 131 KEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASR 176 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~~--~v~~~~g~~~~~~~lila~G~~~~~ 176 (306)
++.|++++.++.|.++..++. .+.+.+|+.+.+|.+|+|+|..+..
T Consensus 243 ~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 243 VAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNT 290 (484)
T ss_dssp HHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCC
Confidence 888999999999999986543 6777888889999999999987653
No 240
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.41 E-value=1.4e-06 Score=76.60 Aligned_cols=94 Identities=23% Similarity=0.312 Sum_probs=69.2
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCC--CcEEEEecCCcccccccCHHHH---------HHHHHHHHHcCCEEEcCceEEEE
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENHLLQRLFTPSLA---------QRYEQLYQQNGVKFVKGASIKNL 275 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~--~~v~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~gv~i~~~~~v~~i 275 (306)
+|+|+|||+|+.|+..|..|.+.+ .+|+++++.+..........+. ..-.+.+.+.||+++.+ +|+.|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~-~v~~i 80 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHD-SALGI 80 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECS-CEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEe-EEEEE
Confidence 789999999999999999998765 5799999887643211111110 00123456789999987 69999
Q ss_pred EeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 276 EAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 276 ~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+. +.+ .|.+.+|+++.+|.+|+|||.
T Consensus 81 d~--~~~--~v~~~~g~~i~yd~LviAtG~ 106 (401)
T 3vrd_B 81 DP--DKK--LVKTAGGAEFAYDRCVVAPGI 106 (401)
T ss_dssp ET--TTT--EEEETTSCEEECSEEEECCCE
T ss_pred Ec--cCc--EEEecccceeecceeeeccCC
Confidence 95 333 477899999999999999984
No 241
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.41 E-value=6e-07 Score=80.30 Aligned_cols=97 Identities=16% Similarity=0.314 Sum_probs=73.2
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.++++|||||..|+.+|..|++.|. +|+++++.+...-. . ++ .+....+.+.+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l~~-------~-~~----------------~~~~~~l~~~l 201 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNY---NVNLIDGHERVLYK-------Y-FD----------------KEFTDILAKDY 201 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTC---EEEEEESSSSTTTT-------T-SC----------------HHHHHHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCC---EEEEEEcCCchhhh-------h-hh----------------hhHHHHHHHHH
Confidence 5789999999999999999999997 99999987543100 0 00 00013456677
Q ss_pred hhcCeEEEeCCcEEEEeCCCC---EEEcCCCcEEecCcEEEeeCCCCc
Q 021871 131 KEKGIEMIYQDPVTSIDIEKQ---TLITNSGKLLKYGSLIVATGCTAS 175 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~~---~v~~~~g~~~~~~~lila~G~~~~ 175 (306)
++.|++++++++|.+++..+. .+.+ ++..+.+|.+++|+|..|+
T Consensus 202 ~~~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 202 EAHGVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp HHTTCEEEESSCEEEEEEETTEEEEEET-TSCEEEESEEEECCCEEEC
T ss_pred HHCCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECCEEEECcCCCCC
Confidence 889999999999999986333 2344 6778999999999998776
No 242
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.40 E-value=7.5e-07 Score=81.98 Aligned_cols=97 Identities=15% Similarity=0.253 Sum_probs=74.3
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.++|+|||||..|+.+|..|++.|. +|+++++.+...- .... .....+.+.+
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l~---~~~~----------------------~~~~~l~~~l 202 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGI---KTTLLELADQVMT---PVDR----------------------EMAGFAHQAI 202 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSCT---TSCH----------------------HHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCC---cEEEEEcCCccch---hcCH----------------------HHHHHHHHHH
Confidence 5699999999999999999999997 9999998754210 0000 0013455667
Q ss_pred hhcCeEEEeCCcEEEEeC-------------------CCC--EEEcCCCcEEecCcEEEeeCCCCc
Q 021871 131 KEKGIEMIYQDPVTSIDI-------------------EKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~-------------------~~~--~v~~~~g~~~~~~~lila~G~~~~ 175 (306)
++.|+++++++.+.++.. ... .+.+.+++.+.+|.+++|+|..|.
T Consensus 203 ~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 268 (565)
T 3ntd_A 203 RDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPE 268 (565)
T ss_dssp HHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccc
Confidence 889999999999999875 222 466678889999999999997765
No 243
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.39 E-value=3.2e-06 Score=71.71 Aligned_cols=94 Identities=18% Similarity=0.249 Sum_probs=72.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCc---c--------ccc----ccCHHHHHHHHHHHHHcCCEEEcCceE
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH---L--------LQR----LFTPSLAQRYEQLYQQNGVKFVKGASI 272 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~---~--------~~~----~~~~~~~~~~~~~~~~~gv~i~~~~~v 272 (306)
.+|+|||+|+.|+..|..|++.+.+|+++.+... + .+. ...+.+.+.+.+.+++.|++++.++ +
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v 84 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH-I 84 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC-E
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee-e
Confidence 4799999999999999999999999999985410 0 011 1234677777888889999999996 8
Q ss_pred EEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 273 KNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 273 ~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+.++. +++.+ .+ +.+|+.+.+|.+|+|||.
T Consensus 85 ~~i~~-~~~~~-~v-~~~~~~~~~~~lv~AtG~ 114 (320)
T 1trb_A 85 NKVDL-QNRPF-RL-NGDNGEYTCDALIIATGA 114 (320)
T ss_dssp EEEEC-SSSSE-EE-EESSCEEEEEEEEECCCE
T ss_pred eEEEe-cCCEE-EE-EeCCCEEEcCEEEECCCC
Confidence 89986 34444 34 567789999999999984
No 244
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.39 E-value=1.3e-06 Score=75.06 Aligned_cols=94 Identities=17% Similarity=0.192 Sum_probs=69.1
Q ss_pred eEEEEcCCHHHHHHHHHHHh---CCCcEEEEecCCcccccc----------------------cCH---H----------
Q 021871 209 KVVVVGGGYIGMEVAAAAVG---WKLDTTIIFPENHLLQRL----------------------FTP---S---------- 250 (306)
Q Consensus 209 ~v~viG~g~~a~e~a~~l~~---~~~~v~~~~~~~~~~~~~----------------------~~~---~---------- 250 (306)
+|+|||+|..|+-.|..|++ .+.+|+++++.+....+. .+. .
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~ 82 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELLA 82 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHHH
T ss_pred cEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHHh
Confidence 68999999999999999999 888999998774322100 000 1
Q ss_pred ----------------------------HHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEe
Q 021871 251 ----------------------------LAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILL 302 (306)
Q Consensus 251 ----------------------------~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a 302 (306)
+...+....++.|++|+++++|++|+.+ ++.+ .|.+.+|+.+.+|.||+|
T Consensus 83 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~-~~~~-~v~~~~g~~~~ad~vV~A 160 (342)
T 3qj4_A 83 YGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLR-DDKW-EVSKQTGSPEQFDLIVLT 160 (342)
T ss_dssp TTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEEC-SSSE-EEEESSSCCEEESEEEEC
T ss_pred CCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEc-CCEE-EEEECCCCEEEcCEEEEC
Confidence 1111222333348999999999999974 4455 588888888999999999
Q ss_pred cC
Q 021871 303 PY 304 (306)
Q Consensus 303 ~g 304 (306)
++
T Consensus 161 ~p 162 (342)
T 3qj4_A 161 MP 162 (342)
T ss_dssp SC
T ss_pred CC
Confidence 87
No 245
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.38 E-value=2.7e-07 Score=82.96 Aligned_cols=99 Identities=14% Similarity=0.239 Sum_probs=74.3
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
..++|+|||||+.|+.+|..|.+.|. +|+++++.+...- . ++ ......+.+.
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtli~~~~~~l~---~------~~----------------~~~~~~l~~~ 227 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGRIGS---EVTVVEFASEIVP---T------MD----------------AEIRKQFQRS 227 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTC---EEEEECSSSSSST---T------SC----------------HHHHHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---cEEEEEcCCcccc---c------cc----------------HHHHHHHHHH
Confidence 35799999999999999999999997 9999998765310 0 00 0001345667
Q ss_pred HhhcCeEEEeCCcEEEEeCCCC--EEEcC---CC--cEEecCcEEEeeCCCCcc
Q 021871 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITN---SG--KLLKYGSLIVATGCTASR 176 (306)
Q Consensus 130 ~~~~~v~~~~~~~v~~v~~~~~--~v~~~---~g--~~~~~~~lila~G~~~~~ 176 (306)
+++.|++++++++|.+++.++. .+.+. +| ..+.+|.+++|+|..|+.
T Consensus 228 l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 281 (470)
T 1dxl_A 228 LEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFT 281 (470)
T ss_dssp HHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECC
T ss_pred HHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCC
Confidence 7889999999999999987543 34443 34 579999999999988763
No 246
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.37 E-value=3e-06 Score=72.53 Aligned_cols=95 Identities=21% Similarity=0.259 Sum_probs=73.5
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCC---cc--------ccc----ccCHHHHHHHHHHHHHcCCEEEcCce
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN---HL--------LQR----LFTPSLAQRYEQLYQQNGVKFVKGAS 271 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~---~~--------~~~----~~~~~~~~~~~~~~~~~gv~i~~~~~ 271 (306)
..+|+|||+|+.|+..|..|++.+.+|+++.+.. .+ .+. ...+.+.+.+.+.+++.|++++.++
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~- 92 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMED- 92 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECCC-
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEee-
Confidence 4579999999999999999999999999998531 11 011 1124667777788888999999997
Q ss_pred EEEEEeCCCCcEEEE-EeCCCCEEecCEEEEecCC
Q 021871 272 IKNLEAGSDGRVAAV-KLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 272 v~~i~~~~~~~v~~v-~~~~G~~i~~d~vv~a~g~ 305 (306)
|.+++. ++.+ .| .+.+|+.+.+|.+|+|||.
T Consensus 93 v~~i~~--~~~~-~v~~~~~g~~~~~d~lviAtG~ 124 (335)
T 2a87_A 93 VESVSL--HGPL-KSVVTADGQTHRARAVILAMGA 124 (335)
T ss_dssp EEEEEC--SSSS-EEEEETTSCEEEEEEEEECCCE
T ss_pred EEEEEe--CCcE-EEEEeCCCCEEEeCEEEECCCC
Confidence 888885 3333 46 7788889999999999984
No 247
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.37 E-value=3.7e-06 Score=76.58 Aligned_cols=98 Identities=18% Similarity=0.239 Sum_probs=76.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCC--ccc-----------ccccCHHHHHHHHHHHHHcCCEEEcCceEE
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN--HLL-----------QRLFTPSLAQRYEQLYQQNGVKFVKGASIK 273 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~--~~~-----------~~~~~~~~~~~~~~~~~~~gv~i~~~~~v~ 273 (306)
..+|+|||+|+.|+..|..+++.+.+|+++.+.. .+. +....+.+...+.+.+++.|++++.+++|+
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~ 291 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSAS 291 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCCEE
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEE
Confidence 3469999999999999999999999999996531 111 011234677788888889999999999999
Q ss_pred EEEeCC--CCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 274 NLEAGS--DGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 274 ~i~~~~--~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
.+.... ++.+ .|.+.+|+.+.+|.+|+|||.
T Consensus 292 ~i~~~~~~~~~~-~V~~~~g~~~~~d~vVlAtG~ 324 (521)
T 1hyu_A 292 KLVPAATEGGLH-QIETASGAVLKARSIIIATGA 324 (521)
T ss_dssp EEECCSSTTSCE-EEEETTSCEEEEEEEEECCCE
T ss_pred EEEeccCCCceE-EEEECCCCEEEcCEEEECCCC
Confidence 997522 2233 688888989999999999984
No 248
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.36 E-value=4.5e-06 Score=70.88 Aligned_cols=95 Identities=17% Similarity=0.192 Sum_probs=72.4
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCc---c--------ccc---ccCHHHHHHHHHHHHHcCCEEEcCceE
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH---L--------LQR---LFTPSLAQRYEQLYQQNGVKFVKGASI 272 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~---~--------~~~---~~~~~~~~~~~~~~~~~gv~i~~~~~v 272 (306)
..+|+|||+|..|+..|..|++.+.+|+++.+... + .+. .....+.+.+.+.+++.|++++. .+|
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v 94 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG-VEV 94 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET-CCE
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE-eeE
Confidence 35799999999999999999999999999998421 0 111 11245667777888888999998 689
Q ss_pred EEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 273 KNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 273 ~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
..++.. ++.+ .|.+ +|+.+.+|.+|+|+|.
T Consensus 95 ~~i~~~-~~~~-~v~~-~~~~~~~~~li~AtG~ 124 (319)
T 3cty_A 95 RSIKKT-QGGF-DIET-NDDTYHAKYVIITTGT 124 (319)
T ss_dssp EEEEEE-TTEE-EEEE-SSSEEEEEEEEECCCE
T ss_pred EEEEEe-CCEE-EEEE-CCCEEEeCEEEECCCC
Confidence 999863 3433 3666 5668999999999984
No 249
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.36 E-value=9.4e-07 Score=79.59 Aligned_cols=99 Identities=14% Similarity=0.219 Sum_probs=74.3
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
..++++|||||+.|+.+|..|.+.|. +|+++++.+...-. + + ......+.+.
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l~~---------~--~--------------~~~~~~l~~~ 230 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGA---EVTVLEAMDKFLPA---------V--D--------------EQVAKEAQKI 230 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSSSTT---------S--C--------------HHHHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC---cEEEEecCCCcCcc---------c--C--------------HHHHHHHHHH
Confidence 35789999999999999999999997 99999987653100 0 0 0002345666
Q ss_pred HhhcCeEEEeCCcEEEEeCCCC--EEEcCCC---cEEecCcEEEeeCCCCcc
Q 021871 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNSG---KLLKYGSLIVATGCTASR 176 (306)
Q Consensus 130 ~~~~~v~~~~~~~v~~v~~~~~--~v~~~~g---~~~~~~~lila~G~~~~~ 176 (306)
+++.|+++++++.+.++..++. .+.+.++ ..+.+|.+++|+|..|+.
T Consensus 231 l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~ 282 (476)
T 3lad_A 231 LTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVT 282 (476)
T ss_dssp HHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECC
T ss_pred HHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccC
Confidence 7889999999999999986543 4555543 578999999999987763
No 250
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.36 E-value=4.1e-06 Score=77.22 Aligned_cols=96 Identities=20% Similarity=0.214 Sum_probs=74.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCc-cc-----------------------cc------------------
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH-LL-----------------------QR------------------ 245 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~-~~-----------------------~~------------------ 245 (306)
-.|+|||+|..|+..|..+++.|.+|.++.+.+. +. ..
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~~ 108 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNA 108 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhhc
Confidence 3699999999999999999999999999998631 10 00
Q ss_pred -----------ccC-HHHHHHHHHHHHH-cCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 246 -----------LFT-PSLAQRYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 246 -----------~~~-~~~~~~~~~~~~~-~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
..+ ..+...+.+.+++ .|++++ +++|+.+.. +++.+.+|.+.+|..+.+|.||+|||.
T Consensus 109 ~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~-e~g~V~GV~t~dG~~I~Ad~VVLATGt 179 (651)
T 3ces_A 109 SKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIV-ENDRVVGAVTQMGLKFRAKAVVLTVGT 179 (651)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEE-SSSBEEEEEETTSEEEEEEEEEECCST
T ss_pred ccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEe-cCCEEEEEEECCCCEEECCEEEEcCCC
Confidence 001 1345566777777 699995 568999986 567777899999988999999999995
No 251
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.35 E-value=2.8e-06 Score=80.61 Aligned_cols=38 Identities=24% Similarity=0.453 Sum_probs=34.1
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (306)
...+||+|||||++||++|+.|++.|+ +|+|+|+.+..
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~---~v~v~E~~~~~ 371 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGI---KVTVLEAKDRI 371 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTC---EEEEECSSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC---cEEEEecccce
Confidence 345899999999999999999999998 99999997654
No 252
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.34 E-value=1.1e-06 Score=78.77 Aligned_cols=97 Identities=19% Similarity=0.281 Sum_probs=75.3
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.++++|||||+.|+.+|..|.+.|. +|+++++.+... . .. + ......+.+.+
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~---~Vt~v~~~~~~l-~--~~------~----------------~~~~~~l~~~l 221 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGV---KTTLIYRGKEIL-S--RF------D----------------QDMRRGLHAAM 221 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSS-T--TS------C----------------HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC---eEEEEEcCCccc-c--cc------C----------------HHHHHHHHHHH
Confidence 5799999999999999999999997 999999876421 0 00 0 00023456677
Q ss_pred hhcCeEEEeCCcEEEEeCCC-C--EEE-cCCCcEEecCcEEEeeCCCCcc
Q 021871 131 KEKGIEMIYQDPVTSIDIEK-Q--TLI-TNSGKLLKYGSLIVATGCTASR 176 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~-~--~v~-~~~g~~~~~~~lila~G~~~~~ 176 (306)
++.|++++.++.|.++..++ . .+. +++|+ +.+|.+++|+|..|+.
T Consensus 222 ~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~ 270 (463)
T 4dna_A 222 EEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPNT 270 (463)
T ss_dssp HHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEESC
T ss_pred HHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCC
Confidence 88999999999999998653 2 577 78887 9999999999987663
No 253
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.34 E-value=9.6e-07 Score=79.31 Aligned_cols=95 Identities=18% Similarity=0.264 Sum_probs=73.4
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.++++|||||+.|+.+|..|.+.|. +|+++++.+... . ... .....+.+.+
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l-~---~~~----------------------~~~~~l~~~l 226 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGS---KVTVLARNTLFF-R---EDP----------------------AIGEAVTAAF 226 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSCTTT-T---SCH----------------------HHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC---EEEEEEECCccC-C---CCH----------------------HHHHHHHHHH
Confidence 5799999999999999999999997 999999875421 0 000 0023456677
Q ss_pred hhcCeEEEeCCcEEEEeCCCC--EEEcCCCcEEecCcEEEeeCCCCc
Q 021871 131 KEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTAS 175 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~~--~v~~~~g~~~~~~~lila~G~~~~ 175 (306)
++.|++++.+++|.+++.++. .+.++ +..+.+|.+++|+|..|+
T Consensus 227 ~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 227 RAEGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPN 272 (467)
T ss_dssp HHTTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEES
T ss_pred HhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcC
Confidence 889999999999999976544 35554 457999999999998776
No 254
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.34 E-value=9.4e-07 Score=79.92 Aligned_cols=97 Identities=14% Similarity=0.145 Sum_probs=71.7
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.++|+|||||+.|+.+|..|.+.|. +|+++++.+... . . ++ + .....+.+.+
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~~l-~--~------~d--------~--------~~~~~l~~~l 225 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGV---IVKVFGRSGSVA-N--L------QD--------E--------EMKRYAEKTF 225 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTC---EEEEECCTTCCT-T--C------CC--------H--------HHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC---eEEEEEECCccc-c--c------CC--------H--------HHHHHHHHHH
Confidence 5799999999999999999999997 999999876531 0 0 00 0 0013344556
Q ss_pred hhcCeEEEeCCcEEEEeCCCC--EEEcC--CC--cEEecCcEEEeeCCCCcc
Q 021871 131 KEKGIEMIYQDPVTSIDIEKQ--TLITN--SG--KLLKYGSLIVATGCTASR 176 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~~--~v~~~--~g--~~~~~~~lila~G~~~~~ 176 (306)
++. +++++++.+.++...+. .+.+. +| ..+.+|.+++|+|..|+.
T Consensus 226 ~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~ 276 (492)
T 3ic9_A 226 NEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANV 276 (492)
T ss_dssp HTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEESC
T ss_pred hhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCC
Confidence 666 99999999999876543 34443 56 589999999999988763
No 255
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.34 E-value=8.1e-07 Score=80.32 Aligned_cols=99 Identities=17% Similarity=0.205 Sum_probs=73.6
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
..++|+|||||..|+.+|..|.+.|. +|+++++.+...-. ++ ......+.+.
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l~~---------~d----------------~~~~~~l~~~ 248 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGA---KVTVVEFLDTILGG---------MD----------------GEVAKQLQRM 248 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTC---EEEEECSSSSSSSS---------SC----------------HHHHHHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCC---EEEEEecccccccc---------CC----------------HHHHHHHHHH
Confidence 35789999999999999999999997 99999987653100 00 0002345666
Q ss_pred HhhcCeEEEeCCcEEEEeCCCC--EEEcCC---C--cEEecCcEEEeeCCCCcc
Q 021871 130 YKEKGIEMIYQDPVTSIDIEKQ--TLITNS---G--KLLKYGSLIVATGCTASR 176 (306)
Q Consensus 130 ~~~~~v~~~~~~~v~~v~~~~~--~v~~~~---g--~~~~~~~lila~G~~~~~ 176 (306)
+++.+++++.++++.++..++. .+.+.+ | ..+.+|.+++|+|..|+.
T Consensus 249 l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 249 LTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPST 302 (491)
T ss_dssp HHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECC
T ss_pred HHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCC
Confidence 7888999999999999876543 344432 4 579999999999988763
No 256
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.34 E-value=4.1e-06 Score=73.35 Aligned_cols=97 Identities=16% Similarity=0.135 Sum_probs=74.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcc------cccc-----------------------------------
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL------LQRL----------------------------------- 246 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~------~~~~----------------------------------- 246 (306)
.+|+|||+|..|+-+|..|++.+.+|+++++.+.. ....
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 36999999999999999999999999999987631 0000
Q ss_pred ------------------cCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEe-CCCC--EEecCEEEEecCC
Q 021871 247 ------------------FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL-EDGS--TIDADTVILLPYD 305 (306)
Q Consensus 247 ------------------~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~-~~G~--~i~~d~vv~a~g~ 305 (306)
....+.+.+.+.+.+.|++++.+++|++++..+++.+ .|++ .+|+ ++.+|.||.|.|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG~ 161 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDGF 161 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCCT
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCCC
Confidence 0123455667777778999999999999986433444 4666 6786 6999999999985
No 257
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.32 E-value=5.1e-06 Score=76.32 Aligned_cols=96 Identities=17% Similarity=0.239 Sum_probs=75.1
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCc-cc-----------------------cc------------------
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH-LL-----------------------QR------------------ 245 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~-~~-----------------------~~------------------ 245 (306)
-.|+|||+|..|+..|..+++.|.+|.++.+.+. +. +.
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~~ 107 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLNT 107 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeeccc
Confidence 4699999999999999999999999999998631 10 00
Q ss_pred -----------ccC-HHHHHHHHHHHHH-cCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 246 -----------LFT-PSLAQRYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 246 -----------~~~-~~~~~~~~~~~~~-~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
..+ ..+...+.+.+++ .|++++ +++|+.+.. +++.+.+|.+.+|..+.+|.||+|||.
T Consensus 108 ~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~-e~g~V~GV~t~dG~~i~AdaVVLATG~ 178 (637)
T 2zxi_A 108 RKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIV-KNNQVVGVRTNLGVEYKTKAVVVTTGT 178 (637)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEE-SSSBEEEEEETTSCEEECSEEEECCTT
T ss_pred ccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEEccCC
Confidence 000 1345566677777 599995 568999986 567777899999999999999999995
No 258
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.31 E-value=4.7e-06 Score=74.50 Aligned_cols=97 Identities=20% Similarity=0.176 Sum_probs=75.7
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccc------c------------------------------------
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ------R------------------------------------ 245 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~------~------------------------------------ 245 (306)
-+|+|||+|..|+-+|..|++.+.+|+++++.+.... .
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQT 86 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCce
Confidence 4699999999999999999999999999998754210 0
Q ss_pred ---------cc-CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeC---CCC--EEecCEEEEecCC
Q 021871 246 ---------LF-TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE---DGS--TIDADTVILLPYD 305 (306)
Q Consensus 246 ---------~~-~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~---~G~--~i~~d~vv~a~g~ 305 (306)
.. ...+.+.+.+.+.+.|++++.+++|+++.. +++.+.+|++. +|+ ++.+|.||.|+|.
T Consensus 87 ~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~-~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~ 160 (453)
T 3atr_A 87 VWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIF-EDGYVKGAVLFNRRTNEELTVYSKVVVEATGY 160 (453)
T ss_dssp EEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEE-ETTEEEEEEEEETTTTEEEEEECSEEEECCGG
T ss_pred EEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEE-ECCEEEEEEEEEcCCCceEEEEcCEEEECcCC
Confidence 00 124666777888889999999999999986 45565556554 675 7999999999984
No 259
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.29 E-value=8.7e-07 Score=78.18 Aligned_cols=93 Identities=20% Similarity=0.248 Sum_probs=70.6
Q ss_pred CeEEEEcCCHHHHHHHHHHHh---CCCcEEEEecCCcccccc----------cCHHHHHHHHHHHHHcCCEEEcCceEEE
Q 021871 208 KKVVVVGGGYIGMEVAAAAVG---WKLDTTIIFPENHLLQRL----------FTPSLAQRYEQLYQQNGVKFVKGASIKN 274 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~---~~~~v~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~gv~i~~~~~v~~ 274 (306)
++|+|||+|..|+..|..|++ .+.+|+++++.+.+.... ....+...+.+.+++.|++++.+ +|+.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEK 80 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEE
Confidence 479999999999999999999 889999999987653210 11123334667777889999988 8999
Q ss_pred EEeCCCCcEEEEEeCCCCE----EecCEEEEecCC
Q 021871 275 LEAGSDGRVAAVKLEDGST----IDADTVILLPYD 305 (306)
Q Consensus 275 i~~~~~~~v~~v~~~~G~~----i~~d~vv~a~g~ 305 (306)
++. ++. .|++.+|+. +.+|.+|+|||.
T Consensus 81 i~~-~~~---~V~~~~g~~~~~~~~~d~lViAtG~ 111 (409)
T 3h8l_A 81 IDA-KSS---MVYYTKPDGSMAEEEYDYVIVGIGA 111 (409)
T ss_dssp EET-TTT---EEEEECTTSCEEEEECSEEEECCCC
T ss_pred EeC-CCC---EEEEccCCcccceeeCCEEEECCCC
Confidence 985 333 355556643 999999999995
No 260
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.29 E-value=5.7e-07 Score=79.90 Aligned_cols=93 Identities=20% Similarity=0.299 Sum_probs=71.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHh--CCCcEEEEecCCcccccccCH----------HHHHHHHHHHHHcCCEEEcCceEEEE
Q 021871 208 KKVVVVGGGYIGMEVAAAAVG--WKLDTTIIFPENHLLQRLFTP----------SLAQRYEQLYQQNGVKFVKGASIKNL 275 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~--~~~~v~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~gv~i~~~~~v~~i 275 (306)
++|+|||+|..|+..|..|++ .+.+|+++.+.+.+......+ .+...+.+.+++.|++++.+ .|+.+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~i 81 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEE-EEEEE
Confidence 689999999999999999999 778999999988764321111 11122345566789999975 89999
Q ss_pred EeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 276 EAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 276 ~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+. ++ . .|.+++|+++.+|.+|+|||.
T Consensus 82 d~-~~-~--~v~~~~g~~i~~d~liiAtG~ 107 (430)
T 3h28_A 82 DP-DA-N--TVTTQSGKKIEYDYLVIATGP 107 (430)
T ss_dssp ET-TT-T--EEEETTCCEEECSEEEECCCC
T ss_pred EC-CC-C--EEEECCCcEEECCEEEEcCCc
Confidence 85 23 3 477888888999999999995
No 261
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.29 E-value=6.9e-07 Score=77.47 Aligned_cols=36 Identities=17% Similarity=0.372 Sum_probs=32.9
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
.+++||+|||||++|+++|++|+++|. +|+|+|+..
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~---~V~vle~~~ 39 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGY---SVHILARDL 39 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC---EEEEEeccC
Confidence 346899999999999999999999998 999999874
No 262
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.28 E-value=6.7e-06 Score=75.21 Aligned_cols=97 Identities=14% Similarity=0.164 Sum_probs=73.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccc--------cc------------cc----------------CHHH
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL--------QR------------LF----------------TPSL 251 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~--------~~------------~~----------------~~~~ 251 (306)
.+|+|||+|.+|+.+|..|.+.+.+++++++.+.+. +. .+ .+.+
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i 96 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEI 96 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHH
Confidence 369999999999999999999999999999875431 00 00 1234
Q ss_pred HHHHHHHHHHcC--CEEEcCceEEEEEeCCC-CcEEEEEeCCCCEEecCEEEEecCC
Q 021871 252 AQRYEQLYQQNG--VKFVKGASIKNLEAGSD-GRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 252 ~~~~~~~~~~~g--v~i~~~~~v~~i~~~~~-~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
.+.+.+..++.+ +++.++++|++++..++ +.+ .|++.+|+++.+|.||+|+|.
T Consensus 97 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w-~V~~~~G~~~~ad~vV~AtG~ 152 (542)
T 1w4x_A 97 LRYINFVADKFDLRSGITFHTTVTAAAFDEATNTW-TVDTNHGDRIRARYLIMASGQ 152 (542)
T ss_dssp HHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEE-EEEETTCCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeE-EEEECCCCEEEeCEEEECcCC
Confidence 455555556554 67899999999987444 344 688899989999999999994
No 263
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.28 E-value=8e-07 Score=77.08 Aligned_cols=38 Identities=21% Similarity=0.302 Sum_probs=34.6
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccC-CCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE-AYA 89 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~-~~~ 89 (306)
...+||+|||||++||++|+.|.+.|+ +|+|+|++ +..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~---~V~VlE~~~~~v 80 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGH---DVTILEANANRV 80 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSC---EEEEECSCSSCC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCC---cEEEEecccccc
Confidence 456899999999999999999999998 99999998 654
No 264
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.28 E-value=1.8e-06 Score=77.14 Aligned_cols=98 Identities=19% Similarity=0.250 Sum_probs=71.8
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
..++++|||||..|+.+|..|.+.|. +|+++++.+...-. .++ ......+.+.
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l~~--------~~~----------------~~~~~~l~~~ 199 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQGK---NVTMIVRGERVLRR--------SFD----------------KEVTDILEEK 199 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSSSTTTT--------TSC----------------HHHHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCC---eEEEEEcCCccchh--------hcC----------------HHHHHHHHHH
Confidence 34699999999999999999999997 99999987653100 000 0001334555
Q ss_pred HhhcCeEEEeCCcEEEEeCCCC-EEEcCCCcEEecCcEEEeeCCCCc
Q 021871 130 YKEKGIEMIYQDPVTSIDIEKQ-TLITNSGKLLKYGSLIVATGCTAS 175 (306)
Q Consensus 130 ~~~~~v~~~~~~~v~~v~~~~~-~v~~~~g~~~~~~~lila~G~~~~ 175 (306)
+++. ++++.++.+.+++.+.. .....++..+.+|.+++|+|..|+
T Consensus 200 l~~~-v~i~~~~~v~~i~~~~~v~~v~~~g~~i~~D~Vv~a~G~~p~ 245 (449)
T 3kd9_A 200 LKKH-VNLRLQEITMKIEGEERVEKVVTDAGEYKAELVILATGIKPN 245 (449)
T ss_dssp HTTT-SEEEESCCEEEEECSSSCCEEEETTEEEECSEEEECSCEEEC
T ss_pred HHhC-cEEEeCCeEEEEeccCcEEEEEeCCCEEECCEEEEeeCCccC
Confidence 6667 99999999999986543 223446678999999999997765
No 265
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.27 E-value=5e-07 Score=84.60 Aligned_cols=35 Identities=31% Similarity=0.459 Sum_probs=32.4
Q ss_pred CCcEEEEcCChHHHHHHHHHHH-----cCCCCCcEEEeccCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVE-----HGMADGRLCIVSKEAY 88 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~-----~g~~~~~V~vie~~~~ 88 (306)
.+||+|||||++||++|..|++ .|+ +|+|+|+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi---~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDL---KVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTC---CEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCC---CEEEEeCCCC
Confidence 4799999999999999999999 998 9999999765
No 266
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.27 E-value=1.3e-06 Score=78.64 Aligned_cols=98 Identities=17% Similarity=0.152 Sum_probs=72.9
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
.++++|||||..|+.+|..|++.|. +|+++++.+... . . .. ......+.+.+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~~l-~--~---------~d-------------~~~~~~~~~~l 238 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGS---KTSLMIRHDKVL-R--S---------FD-------------SMISTNCTEEL 238 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSC-T--T---------SC-------------HHHHHHHHHHH
T ss_pred CccEEEECCCHHHHHHHHHHHHcCC---eEEEEEeCCccc-c--c---------cC-------------HHHHHHHHHHH
Confidence 4789999999999999999999997 999999875531 0 0 00 00013456678
Q ss_pred hhcCeEEEeCCcEEEEeCCC-C---EEEcCC---C----cEEecCcEEEeeCCCCcc
Q 021871 131 KEKGIEMIYQDPVTSIDIEK-Q---TLITNS---G----KLLKYGSLIVATGCTASR 176 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~-~---~v~~~~---g----~~~~~~~lila~G~~~~~ 176 (306)
++.+++++.++.+.++.... . .+.+.+ + ..+.+|.+++|+|..|+.
T Consensus 239 ~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~ 295 (478)
T 3dk9_A 239 ENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNT 295 (478)
T ss_dssp HHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESC
T ss_pred HHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCC
Confidence 88999999999999987542 2 355554 2 578999999999987663
No 267
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.27 E-value=7.1e-06 Score=75.58 Aligned_cols=107 Identities=19% Similarity=0.285 Sum_probs=75.5
Q ss_pred HHHHHHhhhcCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCc-cc-----------------------cc-------
Q 021871 197 ADALISSLEKAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH-LL-----------------------QR------- 245 (306)
Q Consensus 197 ~~~~~~~~~~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~-~~-----------------------~~------- 245 (306)
+..+.......-.|+|||+|..|++.|..+++.|.+|.++.+.+. +. +.
T Consensus 11 ~~~~~~~~~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d 90 (641)
T 3cp8_A 11 SSGLVPRGSHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAID 90 (641)
T ss_dssp ---------CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHH
T ss_pred cCCccccccCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHH
Confidence 344443343445799999999999999999999999999988641 10 00
Q ss_pred ----------------------ccC-HHHHHHHHHHHHH-cCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEE
Q 021871 246 ----------------------LFT-PSLAQRYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVIL 301 (306)
Q Consensus 246 ----------------------~~~-~~~~~~~~~~~~~-~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~ 301 (306)
..+ ..+...+.+.+++ .|++++.+ .|+.+.. +++.+.+|.+.+|+.+.+|.||+
T Consensus 91 ~~gi~f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~-~V~~L~~-d~g~V~GV~t~~G~~i~Ad~VVL 168 (641)
T 3cp8_A 91 ATGIQFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQD-TVIGVSA-NSGKFSSVTVRSGRAIQAKAAIL 168 (641)
T ss_dssp HHEEEEEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEEC-CEEEEEE-ETTEEEEEEETTSCEEEEEEEEE
T ss_pred hcCCchhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEee-EEEEEEe-cCCEEEEEEECCCcEEEeCEEEE
Confidence 001 1345566777777 49999755 8999876 46677789999999999999999
Q ss_pred ecCC
Q 021871 302 LPYD 305 (306)
Q Consensus 302 a~g~ 305 (306)
|||.
T Consensus 169 ATG~ 172 (641)
T 3cp8_A 169 ACGT 172 (641)
T ss_dssp CCTT
T ss_pred CcCC
Confidence 9994
No 268
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.27 E-value=4.7e-06 Score=73.15 Aligned_cols=97 Identities=18% Similarity=0.239 Sum_probs=71.9
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccccc-----ccCHHHH-----------------------------
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR-----LFTPSLA----------------------------- 252 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~-----~~~~~~~----------------------------- 252 (306)
..+|+|||+|..|+.+|..|++.+.+|+++++.+..... .+.+...
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 457999999999999999999999999999987653110 0111111
Q ss_pred --------------HHHHHHHHH--cCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 253 --------------QRYEQLYQQ--NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 253 --------------~~~~~~~~~--~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
..+.+.+.+ .|++++.+++|++++.+ ++.+ .|++.+|+++.+|.||.|.|.
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~-~~~v-~v~~~~g~~~~ad~vV~AdG~ 151 (397)
T 2vou_A 85 RVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQD-SETV-QMRFSDGTKAEANWVIGADGG 151 (397)
T ss_dssp EEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEEC-SSCE-EEEETTSCEEEESEEEECCCT
T ss_pred ccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEec-CCEE-EEEECCCCEEECCEEEECCCc
Confidence 112222222 38999999999999974 4444 588899989999999999985
No 269
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.27 E-value=4.3e-07 Score=82.65 Aligned_cols=38 Identities=21% Similarity=0.318 Sum_probs=34.6
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcC-CCCCcEEEeccCCCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHG-MADGRLCIVSKEAYAP 90 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g-~~~~~V~vie~~~~~~ 90 (306)
+.+||+|||||++||+||++|++.| + +|+|+|+++..+
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~---~V~VlEa~~riG 45 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQ---DCLVLEARDRVG 45 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCC---SEEEECSSSSSB
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCC---CEEEEeCCCCCC
Confidence 3579999999999999999999999 7 999999988764
No 270
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.27 E-value=1.9e-06 Score=77.95 Aligned_cols=99 Identities=16% Similarity=0.225 Sum_probs=73.3
Q ss_pred CCcEEEEcCChHHHHHHHHHHHc----CCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEH----GMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQT 126 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~----g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (306)
.++|+|||||+.|+.+|..|.+. |. +|+++++.+... . . .. +. .....+
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~---~V~~v~~~~~~~-~--~-----~l---------~~-------~~~~~~ 232 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGT---EVIQLFPEKGNM-G--K-----IL---------PE-------YLSNWT 232 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTC---EEEEECSSSSTT-T--T-----TS---------CH-------HHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCC---EEEEEecCcccc-c--c-----cC---------CH-------HHHHHH
Confidence 57899999999999999999874 55 899998764310 0 0 00 00 001345
Q ss_pred hhHHhhcCeEEEeCCcEEEEeCCCC--EEEcCCCcEEecCcEEEeeCCCCcc
Q 021871 127 PEWYKEKGIEMIYQDPVTSIDIEKQ--TLITNSGKLLKYGSLIVATGCTASR 176 (306)
Q Consensus 127 ~~~~~~~~v~~~~~~~v~~v~~~~~--~v~~~~g~~~~~~~lila~G~~~~~ 176 (306)
...+++.|+++++++.|.+++.++. .+.+.+|+.+.+|.+|+|+|..|+.
T Consensus 233 ~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~ 284 (493)
T 1m6i_A 233 MEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNV 284 (493)
T ss_dssp HHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCccH
Confidence 5667889999999999999875433 5777888899999999999988763
No 271
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.26 E-value=1.3e-05 Score=73.99 Aligned_cols=98 Identities=20% Similarity=0.257 Sum_probs=77.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHhC------CCcEEEEecCCccccc------------------------------------
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGW------KLDTTIIFPENHLLQR------------------------------------ 245 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~------~~~v~~~~~~~~~~~~------------------------------------ 245 (306)
-.|+|||+|..|+-+|..|++. +.+|.++++.+.+...
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~~ 115 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFG 115 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhee
Confidence 4699999999999999999998 8999999876432100
Q ss_pred --------cc---C--------------HHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCC------C---
Q 021871 246 --------LF---T--------------PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED------G--- 291 (306)
Q Consensus 246 --------~~---~--------------~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~------G--- 291 (306)
.+ + ..+...+.+.+++.||+|+.++.|+++..++++.+.+|.+.+ |
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~ 195 (584)
T 2gmh_A 116 ILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPK 195 (584)
T ss_dssp EECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEE
T ss_pred eeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcc
Confidence 00 0 145667788888889999999999999875567776787763 3
Q ss_pred ------CEEecCEEEEecCC
Q 021871 292 ------STIDADTVILLPYD 305 (306)
Q Consensus 292 ------~~i~~d~vv~a~g~ 305 (306)
.++.+|.||.|+|.
T Consensus 196 ~~~~~g~~i~Ad~VV~AdG~ 215 (584)
T 2gmh_A 196 TTFERGLELHAKVTIFAEGC 215 (584)
T ss_dssp EEEECCCEEECSEEEECCCT
T ss_pred cccCCceEEECCEEEEeeCC
Confidence 58999999999985
No 272
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.25 E-value=9.9e-07 Score=78.92 Aligned_cols=57 Identities=23% Similarity=0.240 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCC-CCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGS-DGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~-~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
...+.+.+.+.+++.|++++++++|++|...+ ++++.+|.+. |+++.+|.||+|+|.
T Consensus 241 ~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~~-g~~~~ad~VV~a~~~ 298 (453)
T 2bcg_G 241 LGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTK-LGTFKAPLVIADPTY 298 (453)
T ss_dssp TTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEET-TEEEECSCEEECGGG
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEEC-CeEEECCEEEECCCc
Confidence 45788889999999999999999999998732 6777678874 778999999999874
No 273
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.24 E-value=1.3e-05 Score=67.70 Aligned_cols=94 Identities=15% Similarity=0.133 Sum_probs=71.9
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcc-------c------------c-cccCHHHHHHHHHHHHHcCCEEEc
Q 021871 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL-------L------------Q-RLFTPSLAQRYEQLYQQNGVKFVK 268 (306)
Q Consensus 209 ~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~-------~------------~-~~~~~~~~~~~~~~~~~~gv~i~~ 268 (306)
.|+|||+|+.|+..|..+++.+.+|+++++...- + + ....+++.+.+.+.+++.++++..
T Consensus 6 DvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~~~ 85 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIIT 85 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEEC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcEEEE
Confidence 5899999999999999999999999999875420 0 0 011256777788888999999887
Q ss_pred CceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 269 GASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 269 ~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
. .+..+....+.. .+.+.++.++.+|.+|+|||.
T Consensus 86 ~-~v~~~~~~~~~~--~~~~~~~~~~~~~~liiATG~ 119 (314)
T 4a5l_A 86 E-TIDHVDFSTQPF--KLFTEEGKEVLTKSVIIATGA 119 (314)
T ss_dssp C-CEEEEECSSSSE--EEEETTCCEEEEEEEEECCCE
T ss_pred e-EEEEeecCCCce--EEEECCCeEEEEeEEEEcccc
Confidence 6 466666433333 467788889999999999994
No 274
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.24 E-value=6.5e-07 Score=79.57 Aligned_cols=35 Identities=17% Similarity=0.257 Sum_probs=31.8
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+++||+|||||++||++|+.|++.|+ +|+|+|+..
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~---~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDV---DVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTC---EEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCC---eEEEEcCCC
Confidence 45799999999999999999999999 999999976
No 275
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.23 E-value=3.1e-06 Score=75.81 Aligned_cols=97 Identities=12% Similarity=0.083 Sum_probs=71.5
Q ss_pred eEEEEcCCHHHHHHHHHHHhCC-----CcEEEEecCCcccccc-------------------------------------
Q 021871 209 KVVVVGGGYIGMEVAAAAVGWK-----LDTTIIFPENHLLQRL------------------------------------- 246 (306)
Q Consensus 209 ~v~viG~g~~a~e~a~~l~~~~-----~~v~~~~~~~~~~~~~------------------------------------- 246 (306)
.|+|||+|+.|+.+|..|++.+ .+|+++++.+.+....
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~~~ 111 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKHD 111 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHHTT
T ss_pred CEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhhcC
Confidence 6999999999999999999998 8999999887422000
Q ss_pred -------------cCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCC-CcE--EEEEeCCCC----EEecCEEEEecCC
Q 021871 247 -------------FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSD-GRV--AAVKLEDGS----TIDADTVILLPYD 305 (306)
Q Consensus 247 -------------~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~-~~v--~~v~~~~G~----~i~~d~vv~a~g~ 305 (306)
....+.+.+....++.+++++++++|++++..++ +.. ..|.+.+|+ ++.+|.||+|||.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 112 RLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp CHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred ceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 0123444455555666899999999999986321 221 256776765 8999999999995
No 276
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.22 E-value=1.2e-06 Score=76.97 Aligned_cols=38 Identities=13% Similarity=0.190 Sum_probs=34.6
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHc-CCCCCcEEEeccCCCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEH-GMADGRLCIVSKEAYAP 90 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~-g~~~~~V~vie~~~~~~ 90 (306)
..+||+|||||++||++|++|++. |+ +|+|+|+++..+
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~---~v~v~E~~~~~G 44 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDK---RVLVLERRPHIG 44 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCC---CEEEECSSSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCC---CEEEEeCCCCCC
Confidence 368999999999999999999999 88 999999987754
No 277
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.22 E-value=1.5e-05 Score=72.46 Aligned_cols=97 Identities=14% Similarity=0.152 Sum_probs=74.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcc--------ccc----------------------------------
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL--------LQR---------------------------------- 245 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~--------~~~---------------------------------- 245 (306)
.+|+|||+|..|+-+|..|++.+.+|+++.+.+.. .+.
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~ 87 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKEP 87 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCCc
Confidence 47999999999999999999999999999987510 000
Q ss_pred --------------------ccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEE--eCCCC--EEecCEEEE
Q 021871 246 --------------------LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVK--LEDGS--TIDADTVIL 301 (306)
Q Consensus 246 --------------------~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~--~~~G~--~i~~d~vv~ 301 (306)
.....+...+.+.+++.|++++.+++|+++.. +++.+.+|. ..+|+ ++.+|.||.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~-~~~~v~gv~~~~~dG~~~~i~ad~VI~ 166 (512)
T 3e1t_A 88 EPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLF-EGERAVGVRYRNTEGVELMAHARFIVD 166 (512)
T ss_dssp SCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEE-ETTEEEEEEEECSSSCEEEEEEEEEEE
T ss_pred cccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEE-ECCEEEEEEEEeCCCCEEEEEcCEEEE
Confidence 00124556677788889999999999999997 456554444 45574 799999999
Q ss_pred ecCC
Q 021871 302 LPYD 305 (306)
Q Consensus 302 a~g~ 305 (306)
|+|.
T Consensus 167 AdG~ 170 (512)
T 3e1t_A 167 ASGN 170 (512)
T ss_dssp CCCT
T ss_pred CCCc
Confidence 9996
No 278
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.20 E-value=1.4e-06 Score=76.17 Aligned_cols=39 Identities=26% Similarity=0.428 Sum_probs=34.9
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (306)
...+||+|||||++||++|++|++.|+ +|+|+|+++..+
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~---~v~v~E~~~~~G 65 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQ---RVLIVDRRPHIG 65 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCC---ceEEEeccCCCC
Confidence 346899999999999999999999998 999999987653
No 279
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.19 E-value=1.5e-06 Score=78.41 Aligned_cols=39 Identities=18% Similarity=0.353 Sum_probs=35.0
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (306)
.+.+||+|||||++||++|+.|++.|+ +|+|+|+.+..+
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~---~v~v~E~~~~~G 47 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGY---KVTVLEARTRPG 47 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCC---CEEEEeccCCCC
Confidence 345799999999999999999999998 999999987754
No 280
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.19 E-value=1.2e-06 Score=78.87 Aligned_cols=39 Identities=23% Similarity=0.204 Sum_probs=33.8
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (306)
+++||+|||||++||++|++|++.| ++.+|+|+|+++..
T Consensus 3 ~~~~v~IiGaG~~Gl~~A~~L~~~g-~~~~v~v~E~~~~~ 41 (475)
T 3lov_A 3 SSKRLVIVGGGITGLAAAYYAERAF-PDLNITLLEAGERL 41 (475)
T ss_dssp CSCEEEEECCBHHHHHHHHHHHHHC-TTSEEEEECSSSSS
T ss_pred CcccEEEECCCHHHHHHHHHHHHhC-CCCCEEEEECCCCC
Confidence 4589999999999999999999999 12299999997665
No 281
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.18 E-value=8.9e-07 Score=79.12 Aligned_cols=38 Identities=21% Similarity=0.357 Sum_probs=34.3
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (306)
..+||+|||||++||+||++|++.|+ +|+|+|+++..+
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~---~v~v~E~~~~~G 41 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGL---SVAVIEARDRVG 41 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC---cEEEEECCCCCC
Confidence 34799999999999999999999998 899999987654
No 282
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.15 E-value=1.4e-06 Score=78.31 Aligned_cols=39 Identities=18% Similarity=0.256 Sum_probs=33.6
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (306)
...+||+|||||++||++|+.|++.|+ +|+|+|+++..+
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~---~v~v~E~~~~~G 52 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGT---DAVLLESSARLG 52 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTC---CEEEECSSSSSB
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC---CEEEEEcCCCCC
Confidence 346899999999999999999999998 999999987653
No 283
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.15 E-value=2.4e-06 Score=77.11 Aligned_cols=96 Identities=13% Similarity=0.126 Sum_probs=70.9
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
..+++|||||+.|+.+|..|++.|. +|+++++.... . .. + .+....+.+.+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~~~l--~--~~------d----------------~~~~~~l~~~l 237 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGY---EPTVMVRSIVL--R--GF------D----------------QQMAELVAASM 237 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSCSS--T--TS------C----------------HHHHHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCC---EEEEEeCCCCC--c--cc------C----------------HHHHHHHHHHH
Confidence 4689999999999999999999997 99999874221 0 00 0 00013456677
Q ss_pred hhcCeEEEeCCcEEEEeCCC---CEEEcCCCc-----EEecCcEEEeeCCCCc
Q 021871 131 KEKGIEMIYQDPVTSIDIEK---QTLITNSGK-----LLKYGSLIVATGCTAS 175 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~---~~v~~~~g~-----~~~~~~lila~G~~~~ 175 (306)
++.|+++++++.+.++.... ..+.+.++. .+.+|.+++|+|..|+
T Consensus 238 ~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 238 EERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGL 290 (483)
T ss_dssp HHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEEC
T ss_pred HhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccC
Confidence 88999999999999987532 235554432 7899999999998765
No 284
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.15 E-value=1.5e-05 Score=70.20 Aligned_cols=95 Identities=19% Similarity=0.233 Sum_probs=73.0
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccc------------------------------------------
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ------------------------------------------ 244 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~------------------------------------------ 244 (306)
.-+|+|||+|..|+-+|..|++.+.+|+++++.+...+
T Consensus 23 ~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~g 102 (407)
T 3rp8_A 23 HMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRSG 102 (407)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCCC
Confidence 46799999999999999999999999999998764210
Q ss_pred c----c----------------cCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecC
Q 021871 245 R----L----------------FTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPY 304 (306)
Q Consensus 245 ~----~----------------~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g 304 (306)
. . ....+...+.+.+.+ ++++.+++|++++.+ ++.+ .|++.+|+++.+|.||.|.|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~-~~~v-~v~~~~g~~~~a~~vV~AdG 178 (407)
T 3rp8_A 103 ENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEED-ADGV-TVWFTDGSSASGDLLIAADG 178 (407)
T ss_dssp CEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCC
T ss_pred CEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEec-CCcE-EEEEcCCCEEeeCEEEECCC
Confidence 0 0 001234445555544 889999999999974 4444 58899999999999999998
Q ss_pred C
Q 021871 305 D 305 (306)
Q Consensus 305 ~ 305 (306)
.
T Consensus 179 ~ 179 (407)
T 3rp8_A 179 S 179 (407)
T ss_dssp T
T ss_pred c
Confidence 5
No 285
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.14 E-value=1.2e-05 Score=73.91 Aligned_cols=98 Identities=15% Similarity=0.172 Sum_probs=74.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccc-------------------------------------cc-----
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL-------------------------------------QR----- 245 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~-------------------------------------~~----- 245 (306)
-.|+|||+|..|+-+|..|++.+.+|+++++.+... ..
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 129 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQG 129 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccccc
Confidence 469999999999999999999999999998754311 00
Q ss_pred ---------------ccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCC-CEEecCEEEEecCC
Q 021871 246 ---------------LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDG-STIDADTVILLPYD 305 (306)
Q Consensus 246 ---------------~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G-~~i~~d~vv~a~g~ 305 (306)
.....+...+.+.+++.|++|+.+++|++++.++++..+.+...+| +++.+|.||.|.|.
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~ 205 (570)
T 3fmw_A 130 LDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGG 205 (570)
T ss_dssp CBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCS
T ss_pred ccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCC
Confidence 0013456677788888899999999999999755554323333778 68999999999985
No 286
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.13 E-value=1.8e-05 Score=72.35 Aligned_cols=97 Identities=16% Similarity=0.157 Sum_probs=74.8
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccc--------------------------------------------
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL-------------------------------------------- 243 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~-------------------------------------------- 243 (306)
..|+|||+|..|+-+|..|++.+.+|+++++.+...
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLAE 85 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEES
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEEe
Confidence 469999999999999999999999999998875320
Q ss_pred -------c----c------------------ccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCC---cEEEEEeCCC
Q 021871 244 -------Q----R------------------LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDG---RVAAVKLEDG 291 (306)
Q Consensus 244 -------~----~------------------~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~---~v~~v~~~~G 291 (306)
. . .....+...+.+.+++.|++++.+++|++++.++++ .+ .+++.++
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v-~v~~~~~ 164 (535)
T 3ihg_A 86 SVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGV-TARLAGP 164 (535)
T ss_dssp SSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEE-EEEEEET
T ss_pred ccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccE-EEEEEcC
Confidence 0 0 001245566778888889999999999999975441 33 4666655
Q ss_pred ---CEEecCEEEEecCC
Q 021871 292 ---STIDADTVILLPYD 305 (306)
Q Consensus 292 ---~~i~~d~vv~a~g~ 305 (306)
.++.+|.||.|.|.
T Consensus 165 ~~~~~i~a~~vV~AdG~ 181 (535)
T 3ihg_A 165 DGEYDLRAGYLVGADGN 181 (535)
T ss_dssp TEEEEEEEEEEEECCCT
T ss_pred CCeEEEEeCEEEECCCC
Confidence 67999999999985
No 287
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.13 E-value=1e-05 Score=68.25 Aligned_cols=94 Identities=16% Similarity=0.139 Sum_probs=70.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEE-EecCCccc------------cc----ccCHHHHHHHHHHHHHcCCEEEcC
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTI-IFPENHLL------------QR----LFTPSLAQRYEQLYQQNGVKFVKG 269 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~~~v~~-~~~~~~~~------------~~----~~~~~~~~~~~~~~~~~gv~i~~~ 269 (306)
..+|+|||+|..|+..|..|++.+.+|++ +.+. .+. +. .....+...+.+.+++.|++++.+
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 82 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMV 82 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEECC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEEE
Confidence 35799999999999999999999999999 8873 211 11 012467778888888899999998
Q ss_pred ceEEEEEeCCC-CcEEEE-EeCCCCEEecCEEEEecCC
Q 021871 270 ASIKNLEAGSD-GRVAAV-KLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 270 ~~v~~i~~~~~-~~v~~v-~~~~G~~i~~d~vv~a~g~ 305 (306)
+|.++ ..++ +.+ .+ ...++ .+.+|.+|+|||.
T Consensus 83 -~v~~i-~~~~~~~~-~v~~~~~~-~~~~d~lvlAtG~ 116 (315)
T 3r9u_A 83 -GVEQI-LKNSDGSF-TIKLEGGK-TELAKAVIVCTGS 116 (315)
T ss_dssp -CEEEE-EECTTSCE-EEEETTSC-EEEEEEEEECCCE
T ss_pred -EEEEE-ecCCCCcE-EEEEecCC-EEEeCEEEEeeCC
Confidence 88888 4331 343 33 22334 8999999999984
No 288
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.09 E-value=5.8e-06 Score=74.65 Aligned_cols=97 Identities=12% Similarity=0.126 Sum_probs=70.2
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
..+++|||||..|+.+|..|++.|. +|+++++.... +.+ + .+....+...+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~---~Vtlv~~~~~l----~~~------d----------------~~~~~~l~~~l 235 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGL---DTTVMMRSIPL----RGF------D----------------QQMSSLVTEHM 235 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCSS----TTS------C----------------HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC---ceEEEEcCccc----ccC------C----------------HHHHHHHHHHH
Confidence 4689999999999999999999997 99999875321 000 0 00023456678
Q ss_pred hhcCeEEEeCCcEEEEeCC-CC--EEEcCC---Cc--EEecCcEEEeeCCCCcc
Q 021871 131 KEKGIEMIYQDPVTSIDIE-KQ--TLITNS---GK--LLKYGSLIVATGCTASR 176 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~-~~--~v~~~~---g~--~~~~~~lila~G~~~~~ 176 (306)
++.++++++++.+.++... +. .+.+.+ ++ .+.+|.+++|+|..|+.
T Consensus 236 ~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~ 289 (488)
T 3dgz_A 236 ESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPET 289 (488)
T ss_dssp HHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESC
T ss_pred HHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCccc
Confidence 8899999999899888652 22 344433 44 47899999999977653
No 289
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.09 E-value=2.5e-06 Score=77.30 Aligned_cols=38 Identities=21% Similarity=0.347 Sum_probs=34.4
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (306)
+.+||+|||||++||++|+.|++.|+ +|+|+|+++..+
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~---~v~v~E~~~~~G 49 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGL---NVTVFEAEGKAG 49 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSC---EEEEECSSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC---cEEEEEeCCCCC
Confidence 45899999999999999999999998 999999987764
No 290
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.09 E-value=1.8e-06 Score=74.38 Aligned_cols=36 Identities=14% Similarity=0.073 Sum_probs=30.8
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCC---CCCcEEEeccCC
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGM---ADGRLCIVSKEA 87 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~---~~~~V~vie~~~ 87 (306)
+||+|||||++|+++|++|+++|. +..+|+|+|+..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 489999999999999999999981 112999999985
No 291
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.08 E-value=3.5e-06 Score=75.98 Aligned_cols=39 Identities=21% Similarity=0.158 Sum_probs=34.7
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcC-CCCCcEEEeccCCCCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHG-MADGRLCIVSKEAYAP 90 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g-~~~~~V~vie~~~~~~ 90 (306)
++.+||+|||||++||++|++|++.| . +|+|+|+++..+
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~---~v~v~E~~~~~G 46 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYK---NWHLYECNDTPG 46 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCC---SEEEEESSSSSS
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCC---CEEEEeCCCCCC
Confidence 34689999999999999999999998 5 899999987654
No 292
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.08 E-value=4.7e-06 Score=75.44 Aligned_cols=99 Identities=21% Similarity=0.269 Sum_probs=71.1
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCC-----------CCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCC
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGM-----------ADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGS 120 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~-----------~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (306)
..++|||||+.|+.+|..|++.+. .+.+|+++|..+... + .+. .
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il------------~---------~~~----~ 272 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL------------N---------MFE----K 272 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS------------T---------TSC----H
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc------------c---------CCC----H
Confidence 469999999999999999886531 123799999876531 0 000 0
Q ss_pred CCCcCChhHHhhcCeEEEeCCcEEEEeCCCCEE--EcCCCc----EEecCcEEEeeCCCCc
Q 021871 121 GGERQTPEWYKEKGIEMIYQDPVTSIDIEKQTL--ITNSGK----LLKYGSLIVATGCTAS 175 (306)
Q Consensus 121 ~~~~~~~~~~~~~~v~~~~~~~v~~v~~~~~~v--~~~~g~----~~~~~~lila~G~~~~ 175 (306)
.......+.+++.||++++++.|.+++.+...+ ...+|+ .+.+|.+|.|+|..++
T Consensus 273 ~~~~~~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~ 333 (502)
T 4g6h_A 273 KLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKAR 333 (502)
T ss_dssp HHHHHHHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECC
T ss_pred HHHHHHHHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCC
Confidence 012456677889999999999999998765433 334553 6899999999997764
No 293
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.07 E-value=3.2e-06 Score=73.93 Aligned_cols=37 Identities=22% Similarity=0.444 Sum_probs=33.8
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (306)
.+||+|||||++|+++|+.|++.|+ +|+|+|+++..+
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~---~v~v~E~~~~~G 39 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGH---QVHIIDQRDHIG 39 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC---EEEEEESSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC---cEEEEEecCCcC
Confidence 4799999999999999999999998 999999987653
No 294
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.05 E-value=6.4e-06 Score=73.94 Aligned_cols=96 Identities=19% Similarity=0.211 Sum_probs=68.6
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhH
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEW 129 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (306)
..++++|||||+.|+.+|..|.+.|. +|+++++.+...-. ++ + ..+...
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~~~g~---~Vtlv~~~~~~l~~-------~~-d--------------------~~~~~~ 219 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFRLMGV---QTHIIEMLDRALIT-------LE-D--------------------QDIVNT 219 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSCTT-------SC-C--------------------HHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC---EEEEEEeCCcCCCC-------CC-C--------------------HHHHHH
Confidence 35789999999999999999999997 99999987543100 00 0 111222
Q ss_pred Hh-hcCeEEEeCCcEEEEeCCC-C--EEEcC--CCc--EEecCcEEEeeCCCCcc
Q 021871 130 YK-EKGIEMIYQDPVTSIDIEK-Q--TLITN--SGK--LLKYGSLIVATGCTASR 176 (306)
Q Consensus 130 ~~-~~~v~~~~~~~v~~v~~~~-~--~v~~~--~g~--~~~~~~lila~G~~~~~ 176 (306)
+. ...++++.++.+.++.... . .+.++ +|+ .+.+|.+++|+|..|+.
T Consensus 220 l~~~l~v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~ 274 (466)
T 3l8k_A 220 LLSILKLNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVI 274 (466)
T ss_dssp HHHHHCCCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEECC
T ss_pred HHhcCEEEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCccc
Confidence 22 2248899999999887643 2 45565 555 79999999999988764
No 295
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.05 E-value=3.2e-06 Score=73.76 Aligned_cols=35 Identities=20% Similarity=0.210 Sum_probs=32.1
Q ss_pred CcEEEEcCChHHHHHHHHHHHc--CCCCCcEEEeccCCCC
Q 021871 52 REFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEAYA 89 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~--g~~~~~V~vie~~~~~ 89 (306)
+||+|||||++||++|..|++. |+ +|+|+|+.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~---~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLW---AIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTS---EEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCC---CEEEEECCCCC
Confidence 4899999999999999999999 88 99999998654
No 296
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.03 E-value=2.7e-05 Score=68.30 Aligned_cols=96 Identities=14% Similarity=0.106 Sum_probs=71.1
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccccc------ccCHHH-------------------------------
Q 021871 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------LFTPSL------------------------------- 251 (306)
Q Consensus 209 ~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~------~~~~~~------------------------------- 251 (306)
+|+|||+|+.|+-+|..|++.|.+|+++++.+.+... .+.+..
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~~ 82 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFYN 82 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEec
Confidence 7999999999999999999999999999886543110 000000
Q ss_pred ----------------------------HHHHHHHHH-HcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEe
Q 021871 252 ----------------------------AQRYEQLYQ-QNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILL 302 (306)
Q Consensus 252 ----------------------------~~~~~~~~~-~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a 302 (306)
...+.+.|. ..+.+|++++++++++..+++.+ .|.+++|+++++|.||-|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v-~v~~~dG~~~~adlvVgA 161 (412)
T 4hb9_A 83 ERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGGI-KIFFADGSHENVDVLVGA 161 (412)
T ss_dssp TTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEEC
T ss_pred CCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCeE-EEEECCCCEEEeeEEEEC
Confidence 112334333 23557899999999987667766 699999999999999999
Q ss_pred cCC
Q 021871 303 PYD 305 (306)
Q Consensus 303 ~g~ 305 (306)
-|.
T Consensus 162 DG~ 164 (412)
T 4hb9_A 162 DGS 164 (412)
T ss_dssp CCT
T ss_pred CCC
Confidence 874
No 297
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.03 E-value=3.3e-06 Score=73.36 Aligned_cols=36 Identities=17% Similarity=0.321 Sum_probs=33.0
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (306)
+||+|||||++||++|++|++.|+ +|+|+|+++..+
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~---~v~v~E~~~~~G 37 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNK---KVLVIEKRNHIG 37 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTC---CEEEECSSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCC---cEEEEecCCCCC
Confidence 599999999999999999999998 999999987653
No 298
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.03 E-value=4.3e-06 Score=75.67 Aligned_cols=39 Identities=23% Similarity=0.313 Sum_probs=34.8
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (306)
..++||+|||||++||++|+.|++.|+ +|+|+|+.+..+
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~---~v~vlE~~~~~g 69 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGH---QVTVLEASERPG 69 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTC---EEEEECSSSSSB
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC---eEEEEECCCCCC
Confidence 346899999999999999999999998 999999987653
No 299
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.03 E-value=2.8e-05 Score=68.16 Aligned_cols=97 Identities=20% Similarity=0.280 Sum_probs=69.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccccc----cc---C---HHH-------------------------
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR----LF---T---PSL------------------------- 251 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~----~~---~---~~~------------------------- 251 (306)
..+|+|||+|..|+.+|..|++.+.+|+++++.+....+ .. + ..+
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 105 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADEK 105 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECCC
Confidence 458999999999999999999999999999987643110 00 0 000
Q ss_pred ---------------------HHHHHHHHHHc--CCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 252 ---------------------AQRYEQLYQQN--GVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 252 ---------------------~~~~~~~~~~~--gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
...+.+.|.+. +++++.+++|++++.++ +.+ .|++.+|+++.+|.||.|.|.
T Consensus 106 g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~-~~v-~v~~~~g~~~~ad~vV~AdG~ 180 (398)
T 2xdo_A 106 GNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGK-KKW-TLTFENKPSETADLVILANGG 180 (398)
T ss_dssp SEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECS-SSE-EEEETTSCCEEESEEEECSCT
T ss_pred CCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECC-CEE-EEEECCCcEEecCEEEECCCc
Confidence 01122222221 36789999999999744 444 588899989999999999985
No 300
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.03 E-value=4.4e-05 Score=66.45 Aligned_cols=96 Identities=22% Similarity=0.263 Sum_probs=73.0
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccccc-------------------------------------------
Q 021871 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQR------------------------------------------- 245 (306)
Q Consensus 209 ~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~------------------------------------------- 245 (306)
.|+|||+|+.|+-+|..|++.|.+|+++++.+.+...
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPII 85 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSCEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceEee
Confidence 4899999999999999999999999999986543100
Q ss_pred ------------cc-CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeC-CC--CEEecCEEEEecCC
Q 021871 246 ------------LF-TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE-DG--STIDADTVILLPYD 305 (306)
Q Consensus 246 ------------~~-~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~-~G--~~i~~d~vv~a~g~ 305 (306)
.. ...+...+.+.+.+.|++++.+++++.+.. +++.+..+... +| .++.+|.||-|.|.
T Consensus 86 ~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~-~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~ 160 (397)
T 3oz2_A 86 LQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIK-ENGKVAGAKIRHNNEIVDVRAKMVIAADGF 160 (397)
T ss_dssp EECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEE-ETTEEEEEEEEETTEEEEEEEEEEEECCCT
T ss_pred ccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeee-ccceeeeeeecccccceEEEEeEEEeCCcc
Confidence 00 124556677888889999999999999886 45655555443 33 25899999999885
No 301
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.01 E-value=8.5e-06 Score=76.74 Aligned_cols=98 Identities=13% Similarity=0.164 Sum_probs=73.3
Q ss_pred CCcEEEEc--CChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChh
Q 021871 51 NREFVIVG--GGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (306)
Q Consensus 51 ~~~vvIIG--gG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (306)
.++|+||| +|..|+.+|..|.+.|. +|+++++.+...- ..... .....+..
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~---~Vtlv~~~~~l~~--------~~~~~----------------~~~~~l~~ 575 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGY---EVSIVTPGAQVSS--------WTNNT----------------FEVNRIQR 575 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTC---EEEEEESSSSTTG--------GGGGG----------------TCHHHHHH
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCC---eeEEEeccccccc--------ccccc----------------hhHHHHHH
Confidence 45799999 99999999999999997 9999998755310 00000 00134566
Q ss_pred HHhhcCeEEEeCCcEEEEeCCCCEEEc---CCCcEEecCcEEEeeCCCCc
Q 021871 129 WYKEKGIEMIYQDPVTSIDIEKQTLIT---NSGKLLKYGSLIVATGCTAS 175 (306)
Q Consensus 129 ~~~~~~v~~~~~~~v~~v~~~~~~v~~---~~g~~~~~~~lila~G~~~~ 175 (306)
.+++.|++++.+++|.+++.+...+.. .++..+.+|.||+|+|..+.
T Consensus 576 ~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~ 625 (690)
T 3k30_A 576 RLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPR 625 (690)
T ss_dssp HHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEESCEEEC
T ss_pred HHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEECCCCCCC
Confidence 788899999999999999876555542 24457999999999998765
No 302
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.00 E-value=8.1e-05 Score=62.84 Aligned_cols=93 Identities=18% Similarity=0.188 Sum_probs=69.8
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCc---cc--------c---cccCHHHHHHHHHHHHHcCCEEEcCceEEE
Q 021871 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH---LL--------Q---RLFTPSLAQRYEQLYQQNGVKFVKGASIKN 274 (306)
Q Consensus 209 ~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~---~~--------~---~~~~~~~~~~~~~~~~~~gv~i~~~~~v~~ 274 (306)
.|+|||+|+.|+..|..+++.+.+|+++.+... +. + ....+++.....+...+.++.+..+..+..
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSV 87 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceeeeee
Confidence 589999999999999999999999999987531 11 1 111346666777778888888888877766
Q ss_pred EEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 275 LEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 275 i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
... ... .+...+++++.+|.+|+|||.
T Consensus 88 ~~~-~~~---~~~~~~~~~~~~d~liiAtGs 114 (312)
T 4gcm_A 88 EDK-GEY---KVINFGNKELTAKAVIIATGA 114 (312)
T ss_dssp EEC-SSC---EEEECSSCEEEEEEEEECCCE
T ss_pred eee-ecc---eeeccCCeEEEeceeEEcccC
Confidence 663 233 244566789999999999994
No 303
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.00 E-value=7.6e-05 Score=67.47 Aligned_cols=97 Identities=18% Similarity=0.228 Sum_probs=75.2
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccc----------------------c-------------------
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ----------------------R------------------- 245 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~----------------------~------------------- 245 (306)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+.... .
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 91 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVDF 91 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEEG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceeccc
Confidence 45799999999999999999999999999987643210 0
Q ss_pred ------------ccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCC---EEecCEEEEecCC
Q 021871 246 ------------LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS---TIDADTVILLPYD 305 (306)
Q Consensus 246 ------------~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~---~i~~d~vv~a~g~ 305 (306)
.....+...+.+.+++.|++++.+++|++++.+++ .+ .|++.+|+ ++.+|.||.|.|.
T Consensus 92 ~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~-~v-~v~~~~~~g~~~~~a~~vVgADG~ 164 (499)
T 2qa2_A 92 GVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGD-HV-VVEVEGPDGPRSLTTRYVVGCDGG 164 (499)
T ss_dssp GGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSS-CE-EEEEECSSCEEEEEEEEEEECCCT
T ss_pred ccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC-EE-EEEEEcCCCcEEEEeCEEEEccCc
Confidence 00134566677778888999999999999997544 44 47776665 7999999999985
No 304
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.00 E-value=0.00011 Score=67.14 Aligned_cols=52 Identities=17% Similarity=0.235 Sum_probs=43.2
Q ss_pred HHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 253 QRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 253 ~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
..+.+.+++.|++++.+ +|+++...+++.+..|.+.+|+++.+|.||.|+|.
T Consensus 169 ~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~ 220 (538)
T 2aqj_A 169 DFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGM 220 (538)
T ss_dssp HHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGG
T ss_pred HHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCC
Confidence 45566677789999999 89999875566666799999888999999999985
No 305
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.99 E-value=4.4e-06 Score=76.17 Aligned_cols=36 Identities=22% Similarity=0.375 Sum_probs=32.5
Q ss_pred CCCcEEEEcCChHHHHHHHHHHH------------cCCCCCcEEEeccCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVE------------HGMADGRLCIVSKEAY 88 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~------------~g~~~~~V~vie~~~~ 88 (306)
..+||+|||||++|+++|..|++ .|+ +|+|+|+.+.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~---~V~liE~~~~ 53 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKL---NITLIESPDV 53 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSC---EEEEEECSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCC---eEEEEeCCCC
Confidence 45899999999999999999999 787 9999998653
No 306
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.99 E-value=1.8e-05 Score=69.57 Aligned_cols=52 Identities=19% Similarity=0.150 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHcCCEEEcCceEE---------EEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 251 LAQRYEQLYQQNGVKFVKGASIK---------NLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 251 ~~~~~~~~~~~~gv~i~~~~~v~---------~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
+...+.+.+++.|++++.+++|+ ++.. +++.+ .|++.+| .+.+|.||+|+|.
T Consensus 174 l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~-~~~~v-~v~~~~g-~i~a~~VV~A~G~ 234 (405)
T 3c4n_A 174 LALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTV-TNTHQ-IVVHETR-QIRAGVIIVAAGA 234 (405)
T ss_dssp HHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCE-EEEEEEEEECCGG
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEeccccccccceEe-eCCeE-EEEECCc-EEECCEEEECCCc
Confidence 55667777888899999999999 8875 35555 6877777 8999999999984
No 307
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.97 E-value=1.5e-05 Score=72.46 Aligned_cols=97 Identities=16% Similarity=0.247 Sum_probs=67.4
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
..+++|||||..|+.+|..|++.|. +|+++++.... . .. + .+....+.+.+
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~---~Vtlv~~~~~l--~--~~--------d--------------~~~~~~~~~~l 260 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGL---DVTVMVRSILL--R--GF--------D--------------QDMANKIGEHM 260 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCSS--T--TS--------C--------------HHHHHHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCC---eEEEEeccccc--c--cC--------C--------------HHHHHHHHHHH
Confidence 4679999999999999999999997 99999974211 0 00 0 00023455667
Q ss_pred hhcCeEEEeCCcEEEEeCCC----C--EEE--cCCC-c--EEecCcEEEeeCCCCcc
Q 021871 131 KEKGIEMIYQDPVTSIDIEK----Q--TLI--TNSG-K--LLKYGSLIVATGCTASR 176 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~~~----~--~v~--~~~g-~--~~~~~~lila~G~~~~~ 176 (306)
++.|++++.++.+.++.... . .+. ..++ + .+.+|.+++|+|..|+.
T Consensus 261 ~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~ 317 (519)
T 3qfa_A 261 EEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACT 317 (519)
T ss_dssp HHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESC
T ss_pred HHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccC
Confidence 88999999987776665321 2 222 2344 2 56899999999987753
No 308
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.95 E-value=1.8e-05 Score=73.27 Aligned_cols=97 Identities=11% Similarity=0.189 Sum_probs=67.1
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChhHH
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPEWY 130 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (306)
..+|+|||||..|+-+|..|++.|. +|+++++. .. .. .... . ....+.+.+
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~---~Vtlv~~~-~~-l~--~~d~-----------------~-----~~~~~~~~l 336 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGG---DVTVMVRS-IL-LR--GFDQ-----------------Q-----MAEKVGDYM 336 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESS-CS-ST--TSCH-----------------H-----HHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC---EEEEEECC-cC-cC--cCCH-----------------H-----HHHHHHHHH
Confidence 4689999999999999999999997 89999976 21 00 0000 0 013345667
Q ss_pred hhcCeEEEeCCcEEEEeC-------C--CCE--EE--cCCCcEEe--cCcEEEeeCCCCcc
Q 021871 131 KEKGIEMIYQDPVTSIDI-------E--KQT--LI--TNSGKLLK--YGSLIVATGCTASR 176 (306)
Q Consensus 131 ~~~~v~~~~~~~v~~v~~-------~--~~~--v~--~~~g~~~~--~~~lila~G~~~~~ 176 (306)
++.|+++++++.+.++.. . ... +. ..+|+.+. +|.+++|+|..|+.
T Consensus 337 ~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~ 397 (598)
T 2x8g_A 337 ENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQL 397 (598)
T ss_dssp HHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECG
T ss_pred HhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCcccc
Confidence 788999999887777632 1 122 22 34665554 99999999987653
No 309
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.95 E-value=9.2e-06 Score=72.57 Aligned_cols=89 Identities=15% Similarity=0.141 Sum_probs=68.6
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccc-------ccc-cCHHHHHHHHHHHHHcCCEEEcCceEEEEEe
Q 021871 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL-------QRL-FTPSLAQRYEQLYQQNGVKFVKGASIKNLEA 277 (306)
Q Consensus 206 ~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~ 277 (306)
..++|+|||+|+.|+..|..|++.+.+|+++.+.+.+. +.. .+..+.+...+.+++.||+++.++.|.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~---- 196 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVG---- 196 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBT----
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEec----
Confidence 35689999999999999999999999999999987652 211 245677777788899999999998763
Q ss_pred CCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 278 GSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 278 ~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
. .+.++++ .+.+|.||+|||.
T Consensus 197 -~-----~v~~~~~-~~~~d~vvlAtG~ 217 (456)
T 2vdc_G 197 -R-----DASLPEL-RRKHVAVLVATGV 217 (456)
T ss_dssp -T-----TBCHHHH-HSSCSEEEECCCC
T ss_pred -c-----EEEhhHh-HhhCCEEEEecCC
Confidence 0 1233333 3679999999995
No 310
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.94 E-value=9.1e-05 Score=66.99 Aligned_cols=98 Identities=18% Similarity=0.184 Sum_probs=74.9
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccc----------------------cc-----------------
Q 021871 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ----------------------RL----------------- 246 (306)
Q Consensus 206 ~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~----------------------~~----------------- 246 (306)
....|+|||+|+.|+-+|..|++.|.+|+++++.+.... ..
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 89 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPID 89 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceecc
Confidence 345799999999999999999999999999987643210 00
Q ss_pred -------------c-CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCC---EEecCEEEEecCC
Q 021871 247 -------------F-TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGS---TIDADTVILLPYD 305 (306)
Q Consensus 247 -------------~-~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~---~i~~d~vv~a~g~ 305 (306)
. ...+...+.+.+++.|++++.+++|++++.+++ .+ .|++.+|+ ++.+|.||.|.|.
T Consensus 90 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~-~v-~v~~~~~~g~~~~~a~~vVgADG~ 163 (500)
T 2qa1_A 90 FGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGA-GV-TVEVRGPEGKHTLRAAYLVGCDGG 163 (500)
T ss_dssp GGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETT-EE-EEEEEETTEEEEEEESEEEECCCT
T ss_pred cccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCC-eE-EEEEEcCCCCEEEEeCEEEECCCc
Confidence 0 124556677778888999999999999987444 44 46666664 7999999999985
No 311
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.93 E-value=1e-05 Score=71.85 Aligned_cols=56 Identities=20% Similarity=0.328 Sum_probs=47.1
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
...+.+.+.+.+++.|++++++++|++|.. +++++.+|.+ +|+++.+|.||+|+|.
T Consensus 233 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~-~~~~v~~v~~-~g~~~~ad~VV~a~~~ 288 (433)
T 1d5t_A 233 LGELPQGFARLSAIYGGTYMLNKPVDDIIM-ENGKVVGVKS-EGEVARCKQLICDPSY 288 (433)
T ss_dssp TTHHHHHHHHHHHHHTCCCBCSCCCCEEEE-ETTEEEEEEE-TTEEEECSEEEECGGG
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEE-eCCEEEEEEE-CCeEEECCEEEECCCC
Confidence 457888889999999999999999999987 4666666664 6778999999999874
No 312
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.93 E-value=9.7e-06 Score=69.91 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=32.4
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
++||+|||||++|+.+|+.|++.|. +|+|+|+++.
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~---~V~liE~~~~ 35 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGV---PVRLFEMRPK 35 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC---CEEEECCTTT
T ss_pred CCCEEEECchHHHHHHHHHHHHCCC---cEEEEeccCC
Confidence 3799999999999999999999998 9999998764
No 313
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.91 E-value=6.5e-05 Score=66.09 Aligned_cols=95 Identities=17% Similarity=0.230 Sum_probs=71.0
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCc-EEEEecCCccccc-----------------------------------------
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLD-TTIIFPENHLLQR----------------------------------------- 245 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~-v~~~~~~~~~~~~----------------------------------------- 245 (306)
.+|+|||+|..|+-+|..|++.+.+ |+++++.+.+.+.
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g~ 84 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSGA 84 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCCC
Confidence 5799999999999999999999999 9999987542100
Q ss_pred -------------------ccCHHHHHHHHHHHHHc-C-CEEEcCceEEEEEeCCCCcEEEEEeCC---C--CEEecCEE
Q 021871 246 -------------------LFTPSLAQRYEQLYQQN-G-VKFVKGASIKNLEAGSDGRVAAVKLED---G--STIDADTV 299 (306)
Q Consensus 246 -------------------~~~~~~~~~~~~~~~~~-g-v~i~~~~~v~~i~~~~~~~v~~v~~~~---G--~~i~~d~v 299 (306)
.....+...+.+.+.+. | ++++.+++|++++. +++. .|.+.+ | .++.+|.|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v--~v~~~~~~~g~~~~~~ad~v 161 (410)
T 3c96_A 85 TVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGR--VLIGARDGHGKPQALGADVL 161 (410)
T ss_dssp EEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTE--EEEEEEETTSCEEEEEESEE
T ss_pred EEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCcc--EEEEecCCCCCceEEecCEE
Confidence 00013445566666653 5 68999999999987 5553 355544 6 47999999
Q ss_pred EEecCC
Q 021871 300 ILLPYD 305 (306)
Q Consensus 300 v~a~g~ 305 (306)
|.|.|.
T Consensus 162 V~AdG~ 167 (410)
T 3c96_A 162 VGADGI 167 (410)
T ss_dssp EECCCT
T ss_pred EECCCc
Confidence 999985
No 314
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.90 E-value=2e-05 Score=71.20 Aligned_cols=96 Identities=16% Similarity=0.145 Sum_probs=68.3
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccccc------------cCHHHHHHHHHHHHHcCCEEEcCceEEE
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRL------------FTPSLAQRYEQLYQQNGVKFVKGASIKN 274 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~gv~i~~~~~v~~ 274 (306)
..+|+|||+|..|+..|..|++. .+|+++.+.+.+.... ...++...+.+.+ +.|++++.++.|.+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v~~ 185 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSALG 185 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEECC
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEEEE
Confidence 35799999999999999999999 9999999987652211 0122333333333 56999999999999
Q ss_pred EEeCCCCcEEEEEeCCCC--EEecCEEEEecCC
Q 021871 275 LEAGSDGRVAAVKLEDGS--TIDADTVILLPYD 305 (306)
Q Consensus 275 i~~~~~~~v~~v~~~~G~--~i~~d~vv~a~g~ 305 (306)
+.. +++.+......+++ .+.+|.+|+|||.
T Consensus 186 i~~-~~~~~~~~~~~~~~~~~~~~d~lvlAtGa 217 (493)
T 1y56_A 186 VFD-KGEYFLVPVVRGDKLIEILAKRVVLATGA 217 (493)
T ss_dssp CEE-CSSSEEEEEEETTEEEEEEESCEEECCCE
T ss_pred EEc-CCcEEEEEEecCCeEEEEECCEEEECCCC
Confidence 886 34443223334554 6899999999984
No 315
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.84 E-value=9.2e-06 Score=75.79 Aligned_cols=35 Identities=23% Similarity=0.269 Sum_probs=32.5
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
.+||+|||||.+||++|++|++.|. +|+|+||...
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~---~V~vlEK~~~ 39 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGL---STIVLSLIPV 39 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTC---CEEEECSSCG
T ss_pred cccEEEECchHHHHHHHHHHHHCCC---cEEEEeccCC
Confidence 4799999999999999999999998 9999999764
No 316
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.82 E-value=0.00013 Score=71.08 Aligned_cols=97 Identities=15% Similarity=0.125 Sum_probs=69.7
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccccccc-----------CHHHHHHHHHHHHHc-CCEEEcCceEEE
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQRLF-----------TPSLAQRYEQLYQQN-GVKFVKGASIKN 274 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~-gv~i~~~~~v~~ 274 (306)
..+|+|||+|+.|+..|..+++.+.+|+++.+.+.+..... ..++...+.+.+.+. +++++.++.|..
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~ 207 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVFG 207 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEEEe
Confidence 45799999999999999999999999999998765431111 123445555666664 999999999998
Q ss_pred EEeCCCCcEEEEEe---------------CCCCEEecCEEEEecCC
Q 021871 275 LEAGSDGRVAAVKL---------------EDGSTIDADTVILLPYD 305 (306)
Q Consensus 275 i~~~~~~~v~~v~~---------------~~G~~i~~d~vv~a~g~ 305 (306)
+.. ++.+..+.. .++..+.+|.+|+|||.
T Consensus 208 i~~--~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs 251 (965)
T 2gag_A 208 SYD--ANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGA 251 (965)
T ss_dssp EET--TTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCE
T ss_pred eec--CCceeeeEeecccccccccccCCCCceEEEECCEEEECCCC
Confidence 873 333222221 11236899999999994
No 317
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.78 E-value=0.00033 Score=63.73 Aligned_cols=52 Identities=13% Similarity=0.188 Sum_probs=42.2
Q ss_pred HHHHHHHHH-cCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 253 QRYEQLYQQ-NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 253 ~~~~~~~~~-~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
..+.+.+++ .|++++.+ .|++++.++++.+..|.+.+|+++.+|.||.|+|.
T Consensus 179 ~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~ 231 (526)
T 2pyx_A 179 QLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGA 231 (526)
T ss_dssp HHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGG
T ss_pred HHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCc
Confidence 345566667 89999999 59999875567666788888878999999999985
No 318
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.77 E-value=3.9e-05 Score=72.00 Aligned_cols=48 Identities=17% Similarity=0.302 Sum_probs=37.5
Q ss_pred hhHHhhcCeEEEeCCcEEEEeCCCCEEEcCCC--cEEecCcEEEeeCCCCc
Q 021871 127 PEWYKEKGIEMIYQDPVTSIDIEKQTLITNSG--KLLKYGSLIVATGCTAS 175 (306)
Q Consensus 127 ~~~~~~~~v~~~~~~~v~~v~~~~~~v~~~~g--~~~~~~~lila~G~~~~ 175 (306)
...+++.|++++.++++.+++.+.-.+. .+| ..+.+|.+|+|+|..++
T Consensus 580 ~~~l~~~GV~v~~~~~v~~i~~~~v~~~-~~G~~~~i~~D~Vi~a~G~~p~ 629 (671)
T 1ps9_A 580 RTTLLSRGVKMIPGVSYQKIDDDGLHVV-INGETQVLAVDNVVICAGQEPN 629 (671)
T ss_dssp HHHHHHTTCEEECSCEEEEEETTEEEEE-ETTEEEEECCSEEEECCCEEEC
T ss_pred HHHHHhcCCEEEeCcEEEEEeCCeEEEe-cCCeEEEEeCCEEEECCCcccc
Confidence 4567888999999999999885432332 466 57999999999998865
No 319
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.76 E-value=0.00024 Score=64.29 Aligned_cols=53 Identities=11% Similarity=0.120 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEe---CCCC--EEecCEEEEecCC
Q 021871 251 LAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL---EDGS--TIDADTVILLPYD 305 (306)
Q Consensus 251 ~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~---~~G~--~i~~d~vv~a~g~ 305 (306)
+...+.+.+++.|++++.+++|+++..+ + .+.+|++ .+|+ .+.+|.||.|+|.
T Consensus 151 l~~~l~~~a~~~Gv~i~~~~~V~~l~~~-~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~ 208 (501)
T 2qcu_A 151 LVLANAQMVVRKGGEVLTRTRATSARRE-N-GLWIVEAEDIDTGKKYSWQARGLVNATGP 208 (501)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEE-T-TEEEEEEEETTTCCEEEEEESCEEECCGG
T ss_pred HHHHHHHHHHHcCCEEEcCcEEEEEEEe-C-CEEEEEEEECCCCCEEEEECCEEEECCCh
Confidence 4556777788899999999999999863 3 3446777 3675 7999999999984
No 320
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.76 E-value=2.6e-05 Score=73.05 Aligned_cols=38 Identities=21% Similarity=0.389 Sum_probs=34.6
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (306)
...+||+|||||++||++|+.|.+.|+ +|+|+|+.+..
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~---~v~~~e~~~~~ 142 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGM---DVTLLEARDRV 142 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTC---EEEEECSSSSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCC---eEEEEecCCCC
Confidence 446899999999999999999999998 99999998765
No 321
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.75 E-value=2.1e-05 Score=73.36 Aligned_cols=35 Identities=26% Similarity=0.371 Sum_probs=32.1
Q ss_pred CCcEEEEcCChHHHHHHHHHHHc------CCCCCcEEEeccCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEH------GMADGRLCIVSKEAY 88 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~------g~~~~~V~vie~~~~ 88 (306)
.+||+|||||+|||+||+.|++. |. +|+|+||...
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~---~V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEA---KILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTC---CEEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCC---cEEEEEecCC
Confidence 48999999999999999999998 87 9999999754
No 322
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.74 E-value=3.3e-05 Score=73.96 Aligned_cols=39 Identities=21% Similarity=0.365 Sum_probs=35.0
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (306)
...++|+|||||++||++|++|.++|+ +|+|+|+.+..+
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~---~v~v~E~~~~~G 314 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGM---DVTLLEARDRVG 314 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC---cEEEEEecCcCC
Confidence 346799999999999999999999998 999999987653
No 323
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.73 E-value=0.00018 Score=64.60 Aligned_cols=95 Identities=17% Similarity=0.231 Sum_probs=69.3
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccc-------------c------------------------------
Q 021871 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ-------------R------------------------------ 245 (306)
Q Consensus 209 ~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~-------------~------------------------------ 245 (306)
.|+|||+|..|+-.|..+++.+.+|+++.+...-.. .
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~~ 80 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKRIDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTSE 80 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHHH
Confidence 378999999999999999999999999987610000 0
Q ss_pred -----------------------------------ccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeC-
Q 021871 246 -----------------------------------LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLE- 289 (306)
Q Consensus 246 -----------------------------------~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~- 289 (306)
.....+...+.+.+++.|++++.+++| ++.. +++.+.++...
T Consensus 81 ~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~-~~~~v~Gv~v~~ 158 (472)
T 2e5v_A 81 AKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRV-KDGKVTGFVTEK 158 (472)
T ss_dssp HHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEE-ETTEEEEEEETT
T ss_pred HHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEE-eCCEEEEEEEEe
Confidence 000133455666667789999999999 9875 45666666653
Q ss_pred CCCEEecCEEEEecCC
Q 021871 290 DGSTIDADTVILLPYD 305 (306)
Q Consensus 290 ~G~~i~~d~vv~a~g~ 305 (306)
++..+.+|.||+|||.
T Consensus 159 ~~g~~~a~~VVlAtGg 174 (472)
T 2e5v_A 159 RGLVEDVDKLVLATGG 174 (472)
T ss_dssp TEEECCCSEEEECCCC
T ss_pred CCCeEEeeeEEECCCC
Confidence 2236789999999985
No 324
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.70 E-value=2.7e-05 Score=72.61 Aligned_cols=35 Identities=29% Similarity=0.481 Sum_probs=31.9
Q ss_pred CCcEEEEcCChHHHHHHHHHH---H-cCCCCCcEEEeccCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFV---E-HGMADGRLCIVSKEAY 88 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~---~-~g~~~~~V~vie~~~~ 88 (306)
.+||+|||||++||++|+.|+ + .|. +|+|+||...
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~---~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGL---KVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTC---CEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCC---eEEEEeCcCC
Confidence 479999999999999999999 5 787 9999999864
No 325
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.67 E-value=3.3e-05 Score=70.69 Aligned_cols=37 Identities=22% Similarity=0.399 Sum_probs=33.3
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
...+|++|||+|++|+.+|.+|++.|+ +|+|+|+...
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~---~VlvlE~g~~ 41 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGK---KVLLLERGGP 41 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCC---eEEEEeCCCC
Confidence 346899999999999999999999998 9999999864
No 326
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.67 E-value=3.6e-05 Score=72.88 Aligned_cols=97 Identities=20% Similarity=0.231 Sum_probs=69.9
Q ss_pred CCcEEEEc--CChHHHHHHHHHHHcCCCCCcEEEeccCCCCCCCCCccccccccCCCCCCCCCCCcccccCCCCCcCChh
Q 021871 51 NREFVIVG--GGNAAGYAARTFVEHGMADGRLCIVSKEAYAPYERPALTKGYLFPLDKKPARLPGFHTCVGSGGERQTPE 128 (306)
Q Consensus 51 ~~~vvIIG--gG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (306)
.++|+||| ||..|+-+|..|++.|. +|+++++.+ .. . ....+.. ...+.+
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~---~Vtlv~~~~-l~-~------~~~~~~~-----------------~~~~~~ 579 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGH---EVTIVSGVH-LA-N------YMHFTLE-----------------YPNMMR 579 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTC---EEEEEESSC-TT-H------HHHHTTC-----------------HHHHHH
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCC---EEEEEeccc-cc-c------ccccccc-----------------HHHHHH
Confidence 46899999 99999999999999997 999999876 21 0 0000000 123456
Q ss_pred HHhhcCeEEEeCCcEEEEeCCCCEEEc--CCC-cE------------------EecCcEEEeeCCCCc
Q 021871 129 WYKEKGIEMIYQDPVTSIDIEKQTLIT--NSG-KL------------------LKYGSLIVATGCTAS 175 (306)
Q Consensus 129 ~~~~~~v~~~~~~~v~~v~~~~~~v~~--~~g-~~------------------~~~~~lila~G~~~~ 175 (306)
.+++.|++++.++.+.+++.+...+.. .++ .. +.+|.||+|+|..+.
T Consensus 580 ~l~~~GV~i~~~~~v~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~ 647 (729)
T 1o94_A 580 RLHELHVEELGDHFCSRIEPGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSE 647 (729)
T ss_dssp HHHHTTCEEECSEEEEEEETTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEEC
T ss_pred HHHhCCCEEEcCcEEEEEECCeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCC
Confidence 677899999999999998865433332 232 22 899999999997765
No 327
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.66 E-value=4.1e-05 Score=68.73 Aligned_cols=53 Identities=21% Similarity=0.294 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHc--------CCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecC
Q 021871 250 SLAQRYEQLYQQN--------GVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPY 304 (306)
Q Consensus 250 ~~~~~~~~~~~~~--------gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g 304 (306)
.+.+.+.+.+.+. |++|+++++|++|+.. ++.+ .|++.+|+++.+|.||+|+|
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~-~~~v-~v~~~~g~~~~ad~vI~a~~ 267 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYS-PGGV-TVKTEDNSVYSADYVMVSAS 267 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEEC-SSCE-EEEETTSCEEEESEEEECSC
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEc-CCcE-EEEECCCCEEEcCEEEEecC
Confidence 4555555555443 6889999999999974 4455 48999998999999999987
No 328
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.63 E-value=0.00035 Score=64.57 Aligned_cols=96 Identities=19% Similarity=0.206 Sum_probs=71.0
Q ss_pred eEEEEcCCHHHHHHHHHHHhCC--CcEEEEecCCcccc-------c------------------------cc--------
Q 021871 209 KVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENHLLQ-------R------------------------LF-------- 247 (306)
Q Consensus 209 ~v~viG~g~~a~e~a~~l~~~~--~~v~~~~~~~~~~~-------~------------------------~~-------- 247 (306)
.|+|||+|..|+-.|..+++.+ .+|.++.+.+.... . ..
T Consensus 7 DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~~~ 86 (602)
T 1kf6_A 7 DLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDYF 86 (602)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 5899999999999999999988 89999988632100 0 00
Q ss_pred ----------------------------------------------CHHHHHHHHHHHHHcC-CEEEcCceEEEEEeCCC
Q 021871 248 ----------------------------------------------TPSLAQRYEQLYQQNG-VKFVKGASIKNLEAGSD 280 (306)
Q Consensus 248 ----------------------------------------------~~~~~~~~~~~~~~~g-v~i~~~~~v~~i~~~~~ 280 (306)
...+...+.+.+.+.| |+++.++.|+++.. ++
T Consensus 87 ~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~-~~ 165 (602)
T 1kf6_A 87 VHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILV-DD 165 (602)
T ss_dssp HHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEE-ET
T ss_pred HHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEE-eC
Confidence 0123344555566677 99999999999986 46
Q ss_pred CcEEEEEe---CCCC--EEecCEEEEecCC
Q 021871 281 GRVAAVKL---EDGS--TIDADTVILLPYD 305 (306)
Q Consensus 281 ~~v~~v~~---~~G~--~i~~d~vv~a~g~ 305 (306)
+++.+|.. .+|+ .+.+|.||+|||.
T Consensus 166 g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 195 (602)
T 1kf6_A 166 GHVRGLVAMNMMEGTLVQIRANAVVMATGG 195 (602)
T ss_dssp TEEEEEEEEETTTTEEEEEECSCEEECCCC
T ss_pred CEEEEEEEEEcCCCcEEEEEcCeEEECCCC
Confidence 66666643 5676 6899999999985
No 329
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.61 E-value=3.5e-05 Score=75.64 Aligned_cols=90 Identities=16% Similarity=0.151 Sum_probs=68.7
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCC-cEEEEecCCcccc-------c-ccCHHHHHHHHHHHHHcCCEEEcCceEEEEEe
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWKL-DTTIIFPENHLLQ-------R-LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEA 277 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~~-~v~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~ 277 (306)
+++|+|||+|+.|+..|..|++.+. +|+++.+.+.+.. . ..+....+...+.+++.||+++.++.+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~--- 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSE--- 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBST---
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEecc---
Confidence 5689999999999999999999998 7999999865432 1 12445566666778889999999987631
Q ss_pred CCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 278 GSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 278 ~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
. .++++++..+.+|.||+|||.
T Consensus 264 --~----~v~~~~~~~~~~d~vvlAtGa 285 (1025)
T 1gte_A 264 --N----EITLNTLKEEGYKAAFIGIGL 285 (1025)
T ss_dssp --T----SBCHHHHHHTTCCEEEECCCC
T ss_pred --c----eEEhhhcCccCCCEEEEecCC
Confidence 1 134444555789999999995
No 330
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.59 E-value=2.6e-05 Score=69.75 Aligned_cols=88 Identities=14% Similarity=0.123 Sum_probs=66.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCC--CcEEEEecCCccc--------ccc-cCHHHHHHHHHHHHHcCCEEEcCceEEEE
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWK--LDTTIIFPENHLL--------QRL-FTPSLAQRYEQLYQQNGVKFVKGASIKNL 275 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~--~~v~~~~~~~~~~--------~~~-~~~~~~~~~~~~~~~~gv~i~~~~~v~~i 275 (306)
..+|+|||+|+.|+..|..|.+.+ .+|+++.+.+.+. +.. ....+...+.+.+++.|++++.++.|.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~-- 83 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG-- 83 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT--
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe--
Confidence 578999999999999999999987 8999999987654 110 122455667777888899999997662
Q ss_pred EeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 276 EAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 276 ~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
. .|.+.+. .+.+|.||+|||.
T Consensus 84 ---~-----~V~~~~~-~~~~d~lVlAtGs 104 (460)
T 1cjc_A 84 ---R-----DVTVQEL-QDAYHAVVLSYGA 104 (460)
T ss_dssp ---T-----TBCHHHH-HHHSSEEEECCCC
T ss_pred ---e-----EEEeccc-eEEcCEEEEecCc
Confidence 1 1333333 5789999999995
No 331
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.59 E-value=1.7e-05 Score=70.80 Aligned_cols=88 Identities=14% Similarity=0.117 Sum_probs=66.2
Q ss_pred CCeEEEEcCCHHHHHHHHHHHh-C------CCcEEEEecCCccccc---------ccCHHHHHHHHHHHHHcCCEEEcCc
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVG-W------KLDTTIIFPENHLLQR---------LFTPSLAQRYEQLYQQNGVKFVKGA 270 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~-~------~~~v~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~gv~i~~~~ 270 (306)
..+|+|||+|+.|+..|..|.+ . +.+|+++.+.+.+... .....+...+.+.+++.|++++.++
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~v 82 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNV 82 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEeeE
Confidence 4579999999999999999998 6 8899999998765321 0122456667777888899999885
Q ss_pred eEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 271 SIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 271 ~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
.| . . .|.++++ .+.+|.||+|||.
T Consensus 83 ~v---~---~----~v~~~~~-~~~~d~lViAtG~ 106 (456)
T 1lqt_A 83 VV---G---E----HVQPGEL-SERYDAVIYAVGA 106 (456)
T ss_dssp CB---T---T----TBCHHHH-HHHSSEEEECCCC
T ss_pred EE---C---C----EEEECCC-eEeCCEEEEeeCC
Confidence 53 1 1 1445555 5889999999996
No 332
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.57 E-value=3.1e-05 Score=72.32 Aligned_cols=36 Identities=22% Similarity=0.231 Sum_probs=32.6
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcC--------CCCCcEEEeccCC-CC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHG--------MADGRLCIVSKEA-YA 89 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g--------~~~~~V~vie~~~-~~ 89 (306)
.++|+|||||++||++|++|.+.| + +|+|+|+++ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~---~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGI---DVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEE---EEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCc---eEEEEeccCccc
Confidence 468999999999999999999998 6 899999987 54
No 333
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.53 E-value=4.6e-05 Score=69.37 Aligned_cols=35 Identities=31% Similarity=0.476 Sum_probs=31.4
Q ss_pred CCcEEEEcCChHHHHHHHHHHH-cCCCCCcEEEeccCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVE-HGMADGRLCIVSKEAY 88 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~-~g~~~~~V~vie~~~~ 88 (306)
.+|+||||||.+|+.+|.+|++ .++ +|+|+|+...
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~---~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDS---RVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTS---CEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCC---eEEEEcCCCC
Confidence 5899999999999999999998 455 9999999854
No 334
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.43 E-value=6.1e-05 Score=68.73 Aligned_cols=35 Identities=26% Similarity=0.488 Sum_probs=32.0
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
..+|+||||||.+|+.+|.+|++ |. +|+|+|+...
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~---~VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KY---KVLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TS---CEEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc-CC---cEEEEecCCC
Confidence 35899999999999999999999 87 9999999864
No 335
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.42 E-value=0.00046 Score=62.93 Aligned_cols=33 Identities=15% Similarity=0.299 Sum_probs=29.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCc
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENH 241 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~ 241 (306)
-.|+|||+|..|+-.|..+++ +.+|.++.+.+.
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~ 41 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPV 41 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCT
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCCC
Confidence 368999999999999999999 999999988754
No 336
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.42 E-value=8.5e-05 Score=68.19 Aligned_cols=37 Identities=32% Similarity=0.430 Sum_probs=32.5
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
+.+|+||||||.||+.+|.+|++.+ +.+|+|+|+...
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~--~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENP--NVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTST--TSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCC--CCcEEEEecCCC
Confidence 4589999999999999999999986 238999999865
No 337
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.39 E-value=0.0019 Score=60.22 Aligned_cols=52 Identities=13% Similarity=0.089 Sum_probs=40.0
Q ss_pred HHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEe---CCCC--EEecCEEEEecCC
Q 021871 253 QRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL---EDGS--TIDADTVILLPYD 305 (306)
Q Consensus 253 ~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~---~~G~--~i~~d~vv~a~g~ 305 (306)
..+.+.+.+.||+++.++.|.++.. +++++.+|.. .+|+ .+.+|.||+|||-
T Consensus 162 ~~L~~~a~~~gv~i~~~~~v~~L~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 218 (660)
T 2bs2_A 162 FAVANECLKLGVSIQDRKEAIALIH-QDGKCYGAVVRDLVTGDIIAYVAKGTLIATGG 218 (660)
T ss_dssp HHHHHHHHHHTCEEECSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEECSEEEECCCC
T ss_pred HHHHHHHHhCCCEEEECcEEEEEEe-cCCEEEEEEEEECCCCcEEEEEcCEEEEccCc
Confidence 3445556677999999999999986 4677767655 5675 4899999999984
No 338
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.39 E-value=0.0011 Score=61.87 Aligned_cols=97 Identities=19% Similarity=0.252 Sum_probs=71.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHh-CCCcEEEEecCCccc--------------------------------------c----
Q 021871 208 KKVVVVGGGYIGMEVAAAAVG-WKLDTTIIFPENHLL--------------------------------------Q---- 244 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~-~~~~v~~~~~~~~~~--------------------------------------~---- 244 (306)
-.|+|||+|+.|+-+|..|++ .+.+|+++++.+... .
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 112 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDPG 112 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECTT
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCCC
Confidence 369999999999999999999 899999998754311 0
Q ss_pred --c---------------------ccC-HHHHHHHHHHHHHcCC--EEEcCceEEEEEeCCC--C-cEEEEEeC------
Q 021871 245 --R---------------------LFT-PSLAQRYEQLYQQNGV--KFVKGASIKNLEAGSD--G-RVAAVKLE------ 289 (306)
Q Consensus 245 --~---------------------~~~-~~~~~~~~~~~~~~gv--~i~~~~~v~~i~~~~~--~-~v~~v~~~------ 289 (306)
. ..+ ..+...+.+.+++.|+ +++.+++|++++.+++ + .+ .|++.
T Consensus 113 ~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v-~v~~~~~~~~~ 191 (639)
T 2dkh_A 113 QPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPV-TVTLERCDAAH 191 (639)
T ss_dssp STTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCE-EEEEEECSGGG
T ss_pred CCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCE-EEEEEeccccC
Confidence 0 000 2455667788888877 9999999999987442 1 23 45543
Q ss_pred CC--CEEecCEEEEecCC
Q 021871 290 DG--STIDADTVILLPYD 305 (306)
Q Consensus 290 ~G--~~i~~d~vv~a~g~ 305 (306)
+| +++.+|.||.|.|.
T Consensus 192 ~G~~~~i~a~~vVgADG~ 209 (639)
T 2dkh_A 192 AGQIETVQARYVVGCDGA 209 (639)
T ss_dssp TTCEEEEEEEEEEECCCT
T ss_pred CCCeEEEEeCEEEECCCc
Confidence 46 47999999999985
No 339
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.31 E-value=0.00013 Score=67.04 Aligned_cols=36 Identities=17% Similarity=0.415 Sum_probs=31.8
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHc-CCCCCcEEEeccCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEH-GMADGRLCIVSKEA 87 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~-g~~~~~V~vie~~~ 87 (306)
...+|+||||||.||+.+|.+|.+. +. +|+|+|+..
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~---~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNI---SVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTC---CEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCC---cEEEEecCC
Confidence 3468999999999999999999875 44 999999986
No 340
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.31 E-value=0.00016 Score=65.46 Aligned_cols=37 Identities=19% Similarity=0.214 Sum_probs=33.3
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (306)
..+|++|||+|++|+.+|.+|.+.|+ +|+|+|+....
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~---~v~~~e~~~~~ 40 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGV---QTLMLEMGQLW 40 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCC---cEEEEeCCCCC
Confidence 35799999999999999999999987 99999998643
No 341
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.30 E-value=0.0024 Score=58.41 Aligned_cols=93 Identities=16% Similarity=0.281 Sum_probs=66.4
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccc-------------------------------------------
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ------------------------------------------- 244 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~------------------------------------------- 244 (306)
..|+|||+|+.|+-+|..|++.+.+|+++++.+....
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 106 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTRV 106 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESSB
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEeccC
Confidence 3699999999999999999999999999987643210
Q ss_pred -c-----c--------------------cC-HHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCC---C--C
Q 021871 245 -R-----L--------------------FT-PSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLED---G--S 292 (306)
Q Consensus 245 -~-----~--------------------~~-~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~---G--~ 292 (306)
. . .+ ..+...+.+.+++. ++.+++|++++.++++ + .+++.+ | .
T Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~-v-~v~~~~~~~G~~~ 181 (549)
T 2r0c_A 107 GGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDH-V-RATITDLRTGATR 181 (549)
T ss_dssp TSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSC-E-EEEEEETTTCCEE
T ss_pred CCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCE-E-EEEEEECCCCCEE
Confidence 0 0 00 12344455555554 8999999999875444 3 355443 6 4
Q ss_pred EEecCEEEEecCC
Q 021871 293 TIDADTVILLPYD 305 (306)
Q Consensus 293 ~i~~d~vv~a~g~ 305 (306)
++.+|.||.|.|.
T Consensus 182 ~i~a~~vVgADG~ 194 (549)
T 2r0c_A 182 AVHARYLVACDGA 194 (549)
T ss_dssp EEEEEEEEECCCT
T ss_pred EEEeCEEEECCCC
Confidence 7999999999985
No 342
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.27 E-value=0.00022 Score=64.54 Aligned_cols=36 Identities=19% Similarity=0.293 Sum_probs=32.9
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
..+|++|||+|++|+.+|.+|.+.+. +|+|+|+...
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~---~v~~~e~~~~ 45 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGI---PTQIVEMGRS 45 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC---CEEEECSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC---cEEEEECCCC
Confidence 45899999999999999999999887 9999999864
No 343
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.25 E-value=0.0016 Score=61.86 Aligned_cols=41 Identities=20% Similarity=0.340 Sum_probs=35.0
Q ss_pred cCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecC
Q 021871 262 NGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPY 304 (306)
Q Consensus 262 ~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g 304 (306)
.|++|+++++|++|+.+++ .+ .|++.+|+++.+|.||+|+|
T Consensus 542 ~gl~I~l~t~V~~I~~~~~-~v-~V~~~~G~~i~Ad~VIvA~P 582 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGD-EV-QVTTTDGTGYSAQKVLVTVP 582 (776)
T ss_dssp TTSCEESSCCEEEEECSSS-SE-EEEETTCCEEEESEEEECCC
T ss_pred hCCcEEcCCeeEEEEEcCC-EE-EEEECCCcEEEcCEEEECCC
Confidence 3789999999999997444 44 58889998999999999987
No 344
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.25 E-value=0.00033 Score=60.94 Aligned_cols=84 Identities=15% Similarity=0.152 Sum_probs=65.3
Q ss_pred eEEEEcCCHHHHHHHHHHHhC--CCcEEEEecCCcc----------------------c-cc------------------
Q 021871 209 KVVVVGGGYIGMEVAAAAVGW--KLDTTIIFPENHL----------------------L-QR------------------ 245 (306)
Q Consensus 209 ~v~viG~g~~a~e~a~~l~~~--~~~v~~~~~~~~~----------------------~-~~------------------ 245 (306)
+|+|||+|..|+.+|..|++. +.+|+++++.+.. . ..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 81 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHHN 81 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeCC
Confidence 689999999999999999998 9999999886543 0 00
Q ss_pred -------------ccCHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 246 -------------LFTPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 246 -------------~~~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
.....+.+.+.+.+++.|++++++++|++++.. .++.+|.||.|.|.
T Consensus 82 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-------------~~~~ad~vV~AdG~ 141 (381)
T 3c4a_A 82 EPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-------------PLADYDLVVLANGV 141 (381)
T ss_dssp SEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-------------CGGGCSEEEECCGG
T ss_pred eeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-------------ccccCCEEEECCCC
Confidence 012456777888888889999999999888631 13578899988874
No 345
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.17 E-value=0.00028 Score=65.03 Aligned_cols=37 Identities=22% Similarity=0.467 Sum_probs=33.0
Q ss_pred CCCcEEEEcCChHHHHHHHHHHH-cCCCCCcEEEeccCCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVE-HGMADGRLCIVSKEAYA 89 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~-~g~~~~~V~vie~~~~~ 89 (306)
..+|++|||+|++|+.+|.+|.+ .+. +|+|+|+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~---~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKI---KVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTC---CEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCC---cEEEEecCCcc
Confidence 45899999999999999999999 677 99999998653
No 346
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.14 E-value=0.00027 Score=64.65 Aligned_cols=46 Identities=24% Similarity=0.378 Sum_probs=36.4
Q ss_pred HHHcCCEEEcCceEEEEEeCCCCcEEEEEeCC---CC--EEecC-EEEEecC
Q 021871 259 YQQNGVKFVKGASIKNLEAGSDGRVAAVKLED---GS--TIDAD-TVILLPY 304 (306)
Q Consensus 259 ~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~---G~--~i~~d-~vv~a~g 304 (306)
.++.|++|++++.|++|..++++++.+|+..+ |+ .+.++ .||+|+|
T Consensus 219 ~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG 270 (546)
T 2jbv_A 219 VEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTG 270 (546)
T ss_dssp TTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSH
T ss_pred hcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecC
Confidence 34679999999999999874337788888754 53 68898 9999987
No 347
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.11 E-value=0.00018 Score=65.83 Aligned_cols=36 Identities=22% Similarity=0.429 Sum_probs=31.6
Q ss_pred CCcEEEEcCChHHHHHHHHHHH-cCCCCCcEEEeccCCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVE-HGMADGRLCIVSKEAYA 89 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~-~g~~~~~V~vie~~~~~ 89 (306)
.+|+||||||.||+.+|.+|++ .+. +|+|+|+....
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~---~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDV---SVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTC---CEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCC---cEEEEecCCcc
Confidence 4799999999999999999998 455 99999998653
No 348
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.98 E-value=0.0013 Score=48.42 Aligned_cols=37 Identities=11% Similarity=0.253 Sum_probs=32.7
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
..+.+|+|+|.|..|..+|..|.+.|+ +|+++|+++.
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~---~v~vid~~~~ 41 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDI---PLVVIETSRT 41 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTC---CEEEEESCHH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCC---CEEEEECCHH
Confidence 345689999999999999999999998 9999998643
No 349
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.91 E-value=0.0071 Score=56.56 Aligned_cols=32 Identities=28% Similarity=0.339 Sum_probs=29.3
Q ss_pred eEEEEcCCHHHHHHHHHHHh-----CCCcEEEEecCC
Q 021871 209 KVVVVGGGYIGMEVAAAAVG-----WKLDTTIIFPEN 240 (306)
Q Consensus 209 ~v~viG~g~~a~e~a~~l~~-----~~~~v~~~~~~~ 240 (306)
.|+|||+|+.|+-+|..|++ .+.+|.++.+.+
T Consensus 10 dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~ 46 (665)
T 1pn0_A 10 DVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRS 46 (665)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred cEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCC
Confidence 69999999999999999999 999999998754
No 350
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.91 E-value=0.0071 Score=56.36 Aligned_cols=51 Identities=18% Similarity=0.129 Sum_probs=37.7
Q ss_pred HHHHHHHc-CC-EEEcCceEEEEEeCCC--CcEEEEEe---CCCC--EEecCEEEEecCC
Q 021871 255 YEQLYQQN-GV-KFVKGASIKNLEAGSD--GRVAAVKL---EDGS--TIDADTVILLPYD 305 (306)
Q Consensus 255 ~~~~~~~~-gv-~i~~~~~v~~i~~~~~--~~v~~v~~---~~G~--~i~~d~vv~a~g~ 305 (306)
+.+.+++. || +++.++.|+++..+++ +++.+|.. .+|+ .+.++.||+|||.
T Consensus 157 l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG 216 (643)
T 1jnr_A 157 IAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGG 216 (643)
T ss_dssp HHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCc
Confidence 33444555 99 9999999999986333 27777764 5665 5899999999984
No 351
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.75 E-value=0.0023 Score=47.83 Aligned_cols=34 Identities=15% Similarity=0.256 Sum_probs=31.1
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~ 86 (306)
...+++|+|+|..|...|..|.+.|+ +|+++|++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~---~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQ---NVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC---CEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC---CEEEEECC
Confidence 35689999999999999999999998 99999986
No 352
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.72 E-value=0.002 Score=48.24 Aligned_cols=36 Identities=25% Similarity=0.417 Sum_probs=32.0
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
...+|+|||+|..|..+|..|.+.|. +|+++++++.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~---~V~vid~~~~ 53 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGH---SVVVVDKNEY 53 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCC---eEEEEECCHH
Confidence 35689999999999999999999998 9999998643
No 353
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.71 E-value=0.0022 Score=47.12 Aligned_cols=34 Identities=21% Similarity=0.364 Sum_probs=31.1
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+.+++|+|+|..|..+|..|.+.|+ +|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~---~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK---KVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC---CEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---eEEEEECCH
Confidence 4689999999999999999999998 999999753
No 354
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.61 E-value=0.0025 Score=58.89 Aligned_cols=56 Identities=18% Similarity=0.161 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCC-CcEEEEEeCCCCEEecCEEEEec
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSD-GRVAAVKLEDGSTIDADTVILLP 303 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~-~~v~~v~~~~G~~i~~d~vv~a~ 303 (306)
...+.+.+.+.+++.|++++++++|.+|...++ |++.+|.+.+|+++.||.||+.+
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~ 433 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIED 433 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEG
T ss_pred hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEECh
Confidence 567888899999999999999999999986433 78888988889999999999854
No 355
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.45 E-value=0.01 Score=55.36 Aligned_cols=51 Identities=10% Similarity=0.096 Sum_probs=37.8
Q ss_pred HHHHHHHc--CCEEEcCceEEEEEeCCC--CcEEEEEe---CCCC--EEecCEEEEecCC
Q 021871 255 YEQLYQQN--GVKFVKGASIKNLEAGSD--GRVAAVKL---EDGS--TIDADTVILLPYD 305 (306)
Q Consensus 255 ~~~~~~~~--gv~i~~~~~v~~i~~~~~--~~v~~v~~---~~G~--~i~~d~vv~a~g~ 305 (306)
+.+.+++. ||+++.++.+.++..+++ |++.+|.. .+|+ .+.++.||+|||-
T Consensus 172 L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG 231 (662)
T 3gyx_A 172 VAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGG 231 (662)
T ss_dssp HHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCc
Confidence 45555565 999999999998776333 37777754 4554 5889999999984
No 356
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.43 E-value=0.021 Score=51.45 Aligned_cols=55 Identities=13% Similarity=0.063 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHcCCEEEcCceEEEEEeCCCC-------cEEEEEeCCC-----CEEecCEEEEecCC
Q 021871 250 SLAQRYEQLYQQNGVKFVKGASIKNLEAGSDG-------RVAAVKLEDG-----STIDADTVILLPYD 305 (306)
Q Consensus 250 ~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~-------~v~~v~~~~G-----~~i~~d~vv~a~g~ 305 (306)
++.+.+....++.+..+.++++|++++..+++ .+ .|++.++ +++.++.||+|||.
T Consensus 146 E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~-~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 146 EFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFF-TVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEE-EEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceE-EEEEecCCCceEEEEEeCEEEECcCC
Confidence 45556666666667779999999999864432 23 4665443 25889999999995
No 357
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.41 E-value=0.0039 Score=45.41 Aligned_cols=33 Identities=18% Similarity=0.330 Sum_probs=30.0
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
.+|+|||+|..|..+|..|.+.|+ +|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~---~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH---DIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC---eEEEEECCH
Confidence 589999999999999999999997 899999753
No 358
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.37 E-value=0.0037 Score=44.06 Aligned_cols=34 Identities=12% Similarity=0.265 Sum_probs=30.2
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcC-CCCCcEEEeccCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHG-MADGRLCIVSKEA 87 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g-~~~~~V~vie~~~ 87 (306)
+++|+|+|+|..|..++..|.+.| + +|++++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~---~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNY---SVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSE---EEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCc---eEEEEeCCH
Confidence 468999999999999999999998 6 899998753
No 359
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.21 E-value=0.0053 Score=44.88 Aligned_cols=34 Identities=21% Similarity=0.417 Sum_probs=30.4
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+.+|+|+|+|..|..+|..|.+.|+ +|++++++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~---~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGH---EVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC---CCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 4679999999999999999999997 899998753
No 360
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=96.14 E-value=0.0091 Score=53.12 Aligned_cols=38 Identities=11% Similarity=0.209 Sum_probs=35.2
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (306)
..+||+|||||++||++|..|++.|+ +|+|+|+++..+
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~---~V~vlE~~~~~G 47 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGK---KVLHIDKQDHYG 47 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCC---eEEEEeCCCCCC
Confidence 45899999999999999999999998 999999998765
No 361
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.13 E-value=0.0079 Score=46.24 Aligned_cols=35 Identities=14% Similarity=0.102 Sum_probs=31.4
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHc-CCCCCcEEEeccCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEH-GMADGRLCIVSKEA 87 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~-g~~~~~V~vie~~~ 87 (306)
...+|+|+|+|..|..+|..|.+. |+ +|+++|+++
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~---~V~vid~~~ 73 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGK---ISLGIEIRE 73 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCS---CEEEEESCH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCC---eEEEEECCH
Confidence 356899999999999999999999 98 899999764
No 362
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=96.01 E-value=0.0075 Score=53.33 Aligned_cols=38 Identities=13% Similarity=0.306 Sum_probs=34.7
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (306)
..+||+|||||++|+++|..|++.|+ +|+|+|+++..+
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~---~v~~~e~~~~~g 42 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGK---KVLHMDRNPYYG 42 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCC---cEEEEecCCCcc
Confidence 45899999999999999999999998 999999987754
No 363
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.85 E-value=0.01 Score=47.15 Aligned_cols=36 Identities=25% Similarity=0.525 Sum_probs=32.5
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
.+.+.|+|||||..|...|..|.+.|. +|+|++++.
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA---~VtVvap~~ 64 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGA---AITVVAPTV 64 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCC---CEEEECSSC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC---EEEEECCCC
Confidence 456899999999999999999999997 999999863
No 364
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=95.85 E-value=0.031 Score=51.67 Aligned_cols=38 Identities=18% Similarity=0.337 Sum_probs=35.5
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (306)
+.+||+|||+|..|..+|..|++.|+ +|+++|++++.+
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~---~vl~id~~~~~g 44 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQ---RVLHVDSRSYYG 44 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSSSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCC---EEEEEcCCCccc
Confidence 46999999999999999999999998 999999998875
No 365
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.64 E-value=0.014 Score=47.31 Aligned_cols=35 Identities=14% Similarity=0.202 Sum_probs=32.2
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcc
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~ 242 (306)
-.|+|||+|++|+-+|..|++.|.+|+++++.+.+
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 35999999999999999999999999999988765
No 366
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.57 E-value=0.014 Score=51.93 Aligned_cols=35 Identities=20% Similarity=0.343 Sum_probs=32.2
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+.++|+|||.|.+|+++|+.|.++|+ +|++.|.+.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~---~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGA---IVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTC---EEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCC---EEEEEeCCc
Confidence 45799999999999999999999998 999999864
No 367
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.53 E-value=0.0083 Score=49.30 Aligned_cols=36 Identities=19% Similarity=0.443 Sum_probs=32.5
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
.+.+.|+|||||..|+..|..|.+.|. +|+|++++.
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~Ga---~VtViap~~ 46 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPTGC---KLTLVSPDL 46 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTC---EEEEEEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhCCC---EEEEEcCCC
Confidence 346799999999999999999999998 999999864
No 368
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.45 E-value=0.014 Score=46.25 Aligned_cols=33 Identities=27% Similarity=0.535 Sum_probs=30.1
Q ss_pred cEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 53 EFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 53 ~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
+|+|+|+|..|..+|..|.+.|+ +|+++|+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~---~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY---GVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC---CEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCC---eEEEEECCHH
Confidence 69999999999999999999998 9999997643
No 369
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.44 E-value=0.01 Score=52.50 Aligned_cols=36 Identities=17% Similarity=0.276 Sum_probs=32.3
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (306)
.++|+|||.|.+|+++|+.|.++|+ +|++.|.+...
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~---~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGV---TPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTC---CCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCC---EEEEEECCCCc
Confidence 4689999999999999999999998 99999987553
No 370
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.41 E-value=0.019 Score=47.50 Aligned_cols=36 Identities=14% Similarity=0.118 Sum_probs=32.2
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
+.++|.|||+|.-|...|..|++.|+ +|+++|+++.
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G~---~V~l~d~~~~ 38 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHGF---AVTAYDINTD 38 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC---eEEEEeCCHH
Confidence 35689999999999999999999998 9999997643
No 371
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.33 E-value=0.022 Score=47.67 Aligned_cols=34 Identities=18% Similarity=0.353 Sum_probs=31.2
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+++|.|||+|.-|...|..|++.|+ +|+++|+++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~---~V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGH---TVVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC---eEEEEECCH
Confidence 4689999999999999999999998 999999864
No 372
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.16 E-value=0.023 Score=48.74 Aligned_cols=37 Identities=19% Similarity=0.213 Sum_probs=32.5
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
+++.+|.|||+|.-|.+.|..|++.|+ +|+++++++.
T Consensus 27 ~~~mkI~VIGaG~mG~alA~~La~~G~---~V~l~~r~~~ 63 (356)
T 3k96_A 27 PFKHPIAILGAGSWGTALALVLARKGQ---KVRLWSYESD 63 (356)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHTTTC---CEEEECSCHH
T ss_pred ccCCeEEEECccHHHHHHHHHHHHCCC---eEEEEeCCHH
Confidence 345689999999999999999999998 9999998643
No 373
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.90 E-value=0.029 Score=47.37 Aligned_cols=33 Identities=15% Similarity=0.409 Sum_probs=30.5
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
.+|+|||+|.-|.+.|..|++.|+ +|+++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~---~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH---CVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC---EEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC---eEEEEeCCh
Confidence 589999999999999999999998 999999864
No 374
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.89 E-value=0.03 Score=47.40 Aligned_cols=35 Identities=20% Similarity=0.193 Sum_probs=31.3
Q ss_pred CCcEEEEcCChHHHH-HHHHHHHcCCCCCcEEEeccCCC
Q 021871 51 NREFVIVGGGNAAGY-AARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~-aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
+++|.|||.|.+|++ +|..|.++|+ +|++.|....
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~---~V~~~D~~~~ 39 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGF---EVSGCDAKMY 39 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTC---EEEEEESSCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCC---EEEEEcCCCC
Confidence 568999999999997 8889999999 9999998754
No 375
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.81 E-value=0.036 Score=48.06 Aligned_cols=36 Identities=17% Similarity=0.131 Sum_probs=32.3
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
...+|+|||+|..|+.+|..+...|. +|+++|+...
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa---~V~v~D~~~~ 224 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGA---VVSATDVRPA 224 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC---EEEEEcCCHH
Confidence 35799999999999999999999998 9999998754
No 376
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=94.80 E-value=0.032 Score=45.29 Aligned_cols=36 Identities=19% Similarity=0.345 Sum_probs=32.4
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
..+|+|||+|-.|..+|..|++.|.. +++++|++..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~--~i~lvD~d~v 66 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVG--NLTLLDFDTV 66 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCS--EEEEECCCBC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCC--eEEEEcCCCc
Confidence 46899999999999999999999975 8999998754
No 377
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=94.69 E-value=0.038 Score=49.28 Aligned_cols=39 Identities=23% Similarity=0.326 Sum_probs=32.9
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYAP 90 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~~ 90 (306)
..+||+|||||++||++|+.|.+.|+. +|+|+|+.+..+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~--~v~~~e~~~~~g 41 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGIT--DLLILEATDHIG 41 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCC--CEEEECSSSSSB
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCC--ceEEEeCCCCCC
Confidence 357999999999999999999999863 699999987643
No 378
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=94.69 E-value=0.038 Score=47.46 Aligned_cols=36 Identities=28% Similarity=0.315 Sum_probs=32.5
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (306)
+++|+|||||..|..+|+.+++.|+ ++.++|+++..
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~---~vv~vd~~~~~ 36 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGM---KVVLVDKNPQA 36 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCCCC
Confidence 4789999999999999999999999 99999987653
No 379
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.68 E-value=0.035 Score=47.47 Aligned_cols=34 Identities=18% Similarity=0.265 Sum_probs=30.8
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+.+|.|||+|..|...|..|.+.|+ +|+++++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~---~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQ---SVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCC---EEEEEeCCH
Confidence 4689999999999999999999998 899998764
No 380
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.67 E-value=0.038 Score=46.91 Aligned_cols=33 Identities=21% Similarity=0.445 Sum_probs=30.3
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~ 86 (306)
..+|.|||+|.-|.+.|..|++.|+ +|+++++.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~---~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGE---AINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTC---CEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC---EEEEEECh
Confidence 3589999999999999999999998 89999974
No 381
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=94.62 E-value=0.026 Score=50.62 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=30.9
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcccc
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLLQ 244 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~~ 244 (306)
++|+|||+|..|+-.|..|++.|.+|+++++++++..
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG 38 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGG 38 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-----
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCC
Confidence 6899999999999999999999999999999887653
No 382
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.61 E-value=0.037 Score=46.35 Aligned_cols=33 Identities=12% Similarity=0.228 Sum_probs=30.4
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
.+|.|||+|..|...|..|.+.|+ +|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~---~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN---DVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC---cEEEEECCH
Confidence 489999999999999999999998 999999864
No 383
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.59 E-value=0.034 Score=46.73 Aligned_cols=33 Identities=18% Similarity=0.286 Sum_probs=29.8
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
.+|+|||+|--|.+.|..|.+.|+ +|++++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~---~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE---DVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC---CEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC---eEEEEEcCc
Confidence 589999999999999999999997 899999864
No 384
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.58 E-value=0.041 Score=46.42 Aligned_cols=36 Identities=25% Similarity=0.324 Sum_probs=31.5
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
...+|.|||+|.-|.+.|..|++.|+ +|+++|+++.
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G~---~V~l~d~~~~ 40 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGGF---RVKLYDIEPR 40 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTC---CEEEECSCHH
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 45689999999999999999999998 9999998754
No 385
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.56 E-value=0.042 Score=46.10 Aligned_cols=37 Identities=11% Similarity=0.197 Sum_probs=32.8
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
.++.+|.|||.|.-|...|..|++.|+ +|++++++..
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~---~V~~~dr~~~ 55 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGF---KVTVWNRTLS 55 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSGG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCC---eEEEEeCCHH
Confidence 345689999999999999999999998 9999998754
No 386
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.54 E-value=0.037 Score=47.61 Aligned_cols=36 Identities=17% Similarity=0.043 Sum_probs=32.3
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
...+|+|||+|..|+.+|+.|...|. +|+++|+...
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa---~V~v~D~~~~ 218 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA---KTTGYDVRPE 218 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC---EEEEECSSGG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 35799999999999999999999997 8999998754
No 387
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=94.53 E-value=0.046 Score=46.95 Aligned_cols=36 Identities=19% Similarity=0.302 Sum_probs=32.5
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~ 86 (306)
....+|+|+|||-+|..+|+.|...|.+ +|+++|+.
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~~--~I~v~Dr~ 225 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGVK--NVVAVDRK 225 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTCC--EEEEEETT
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCCC--eEEEEECC
Confidence 3467999999999999999999999975 89999987
No 388
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=94.47 E-value=0.055 Score=44.59 Aligned_cols=35 Identities=20% Similarity=0.260 Sum_probs=31.6
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
+++|+|.|+|..|..++..|.+.|+ +|+++++...
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~---~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGH---EVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC---CEEEEECTTS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCcc
Confidence 4689999999999999999999998 9999998754
No 389
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.40 E-value=0.054 Score=42.60 Aligned_cols=35 Identities=20% Similarity=0.261 Sum_probs=31.1
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
..+|.|||+|.-|.+.|..|.+.|+ +|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~---~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGH---EVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC---EEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---EEEEEcCCHH
Confidence 4689999999999999999999998 9999987654
No 390
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.34 E-value=0.018 Score=51.32 Aligned_cols=34 Identities=26% Similarity=0.471 Sum_probs=31.3
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
++|+|+|+|-.|.+.|..|.+.|+ +|+++|+++.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~---~v~vId~d~~ 37 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENN---DITIVDKDGD 37 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTE---EEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC---CEEEEECCHH
Confidence 479999999999999999999998 9999998754
No 391
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.33 E-value=0.053 Score=46.63 Aligned_cols=36 Identities=25% Similarity=0.457 Sum_probs=32.3
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
...+|||+|||.+|+.+|+.|...|.+ +|+++|+..
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~--~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGAT--KVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCC--EEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCC--eEEEEECCC
Confidence 457999999999999999999999975 999999874
No 392
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.25 E-value=0.053 Score=47.48 Aligned_cols=35 Identities=14% Similarity=0.376 Sum_probs=31.9
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
..+|+|||.|..|..+|..|.+.|+ +|+++|+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~---~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV---KMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC---CEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC---CEEEEECCHH
Confidence 3589999999999999999999998 9999998754
No 393
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.12 E-value=0.072 Score=45.16 Aligned_cols=35 Identities=11% Similarity=0.228 Sum_probs=30.5
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+.+|+|||+|..|.++|..|++.|+- +|+++|.+.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~--~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELA--DVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC--EEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC--eEEEEECCh
Confidence 46899999999999999999999863 599999764
No 394
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=94.11 E-value=0.06 Score=45.28 Aligned_cols=35 Identities=26% Similarity=0.333 Sum_probs=31.4
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
..+|.|||+|.-|-..|..++..|+ +|+++|..+.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~---~V~l~D~~~~ 40 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGF---RVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC---CEEEECSCHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCC---eEEEEECCHH
Confidence 4689999999999999999999999 9999998653
No 395
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.08 E-value=0.056 Score=47.93 Aligned_cols=33 Identities=21% Similarity=0.331 Sum_probs=30.8
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
.+|.|||.|..|+..|..|++.|+ +|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~---~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGA---NVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCC---EEEEEECCH
Confidence 589999999999999999999998 999999864
No 396
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=94.07 E-value=0.04 Score=43.75 Aligned_cols=36 Identities=19% Similarity=0.317 Sum_probs=30.9
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEE-eccCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCI-VSKEA 87 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~v-ie~~~ 87 (306)
+++.+|.|||+|.-|.+.|..|.+.|+ +|++ ++++.
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~---~V~~v~~r~~ 57 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQI---PAIIANSRGP 57 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTC---CEEEECTTCG
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCC---EEEEEECCCH
Confidence 335689999999999999999999998 8888 77654
No 397
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=94.06 E-value=0.064 Score=43.30 Aligned_cols=37 Identities=14% Similarity=0.288 Sum_probs=32.0
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
...++|.|||+|.-|.+.|..|.+.|+ +|++++++..
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~---~V~~~~r~~~ 53 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGH---EVTIGTRDPK 53 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCC---EEEEEeCChh
Confidence 456799999999999999999999998 9999998644
No 398
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.04 E-value=0.067 Score=47.07 Aligned_cols=36 Identities=17% Similarity=0.144 Sum_probs=32.5
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
.++.+|.|||.|..||..|..|++.|+ +|+.+|-++
T Consensus 19 ~~m~~IaViGlGYVGLp~A~~~A~~G~---~V~g~Did~ 54 (444)
T 3vtf_A 19 SHMASLSVLGLGYVGVVHAVGFALLGH---RVVGYDVNP 54 (444)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTC---EEEEECSCH
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCC---cEEEEECCH
Confidence 456799999999999999999999999 999999764
No 399
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=93.99 E-value=0.073 Score=44.89 Aligned_cols=38 Identities=11% Similarity=0.191 Sum_probs=31.7
Q ss_pred CCCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 48 ~~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
.|++.+|+|||+|..|.++|..|+..++. +|+++|...
T Consensus 4 ~m~~~kI~viGaG~vG~~~a~~l~~~~~~--~v~L~Di~~ 41 (324)
T 3gvi_A 4 SMARNKIALIGSGMIGGTLAHLAGLKELG--DVVLFDIAE 41 (324)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHHTTCC--EEEEECSSS
T ss_pred CCcCCEEEEECCCHHHHHHHHHHHhCCCC--eEEEEeCCc
Confidence 35567999999999999999999999873 899999754
No 400
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.98 E-value=0.063 Score=44.30 Aligned_cols=33 Identities=9% Similarity=0.119 Sum_probs=30.4
Q ss_pred cEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 53 EFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 53 ~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
+|.|||+|.-|...|..|.+.|+ +|++++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~---~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGH---EVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC---EEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCC---CEEEEEcCcc
Confidence 69999999999999999999998 9999998754
No 401
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=93.98 E-value=0.05 Score=45.27 Aligned_cols=33 Identities=15% Similarity=0.201 Sum_probs=30.4
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
.+|+|||+|--|.+.|..|.+.|. +|++++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~---~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLP---HTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCT---TCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCC---eEEEEEecc
Confidence 589999999999999999999997 899999874
No 402
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=93.95 E-value=0.072 Score=42.07 Aligned_cols=35 Identities=26% Similarity=0.411 Sum_probs=29.9
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
++.+|.|||+|..|...|..|.+.|+ +|++++++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~---~V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGF---KVVVGSRNP 61 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTC---CEEEEESSH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 34689999999999999999999998 899988753
No 403
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=93.91 E-value=0.065 Score=42.76 Aligned_cols=36 Identities=17% Similarity=0.333 Sum_probs=30.8
Q ss_pred CCCCcEEEEcC-ChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 49 NENREFVIVGG-GNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 49 ~~~~~vvIIGg-G~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
.+.+.|+|.|| |..|..++.+|.++|+ +|+++.++.
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~---~V~~~~R~~ 55 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGH---EPVAMVRNE 55 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC---EEEEEESSG
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCC---eEEEEECCh
Confidence 34578999998 9999999999999998 999998763
No 404
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.88 E-value=0.068 Score=45.85 Aligned_cols=38 Identities=11% Similarity=0.135 Sum_probs=32.0
Q ss_pred CCCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 48 ANENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 48 ~~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
++++.+|.|||.|.-|...|..|.+.|+ +|+++++...
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~---~V~v~dr~~~ 56 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGH---ECVVYDLNVN 56 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCHH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCC---EEEEEeCCHH
Confidence 3455799999999999999999999998 9999998643
No 405
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=93.84 E-value=0.081 Score=44.47 Aligned_cols=36 Identities=11% Similarity=0.272 Sum_probs=31.5
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~ 86 (306)
++..+|.|||+|..|.++|+.|+..|+ .+|+++|..
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~--~~v~l~D~~ 41 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKEL--ADVVLVDIP 41 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC--CEEEEECCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCC--CeEEEEecc
Confidence 445789999999999999999999986 389999976
No 406
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.83 E-value=0.054 Score=44.58 Aligned_cols=35 Identities=20% Similarity=0.303 Sum_probs=31.4
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
+++|+|.|+|..|..++..|.+.|+ +|+++.+...
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~---~V~~~~r~~~ 39 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGW---RIIGTSRNPD 39 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTC---EEEEEESCGG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCC---EEEEEEcChh
Confidence 4689999999999999999999998 9999988653
No 407
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=93.80 E-value=0.069 Score=46.58 Aligned_cols=35 Identities=14% Similarity=0.111 Sum_probs=31.5
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
..+|+|||+|.+|+.+|..+...|. +|+++|++..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga---~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGA---IVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---EEEEEcCCHH
Confidence 5689999999999999999999997 8999997643
No 408
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=93.79 E-value=0.057 Score=47.98 Aligned_cols=35 Identities=37% Similarity=0.609 Sum_probs=31.8
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+.++|+|||||.+|...+..|.+.|. +|+|++++.
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga---~V~vi~~~~ 45 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGA---RLTVNALTF 45 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTB---EEEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcC---EEEEEcCCC
Confidence 45789999999999999999999997 999999863
No 409
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.79 E-value=0.085 Score=41.87 Aligned_cols=34 Identities=29% Similarity=0.422 Sum_probs=31.4
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecC
Q 021871 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 239 (306)
Q Consensus 206 ~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~ 239 (306)
.+++|+|||+|.+|..-+..|.+.+.+|+++.+.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4789999999999999999999999999999764
No 410
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=93.78 E-value=0.07 Score=43.29 Aligned_cols=37 Identities=19% Similarity=0.300 Sum_probs=33.0
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
+..+|+|||+|-.|..+|..|++.|.. +++|+|.+..
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg--~i~lvD~d~v 63 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVG--TLVLADDDDV 63 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCS--EEEEECCCBC
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCC--eEEEEeCCCc
Confidence 357999999999999999999999985 8999998754
No 411
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.77 E-value=0.17 Score=42.60 Aligned_cols=32 Identities=19% Similarity=0.192 Sum_probs=29.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCCcEEEEecC
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 239 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~ 239 (306)
.+|+|+|.|..|.-+|..|++.+.+|+++.|.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 47999999999999999999999999999875
No 412
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=93.73 E-value=0.082 Score=44.73 Aligned_cols=37 Identities=19% Similarity=0.538 Sum_probs=33.3
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
+..+|+|||+|-.|..+|.+|++.|.. +++++|.+..
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg--~ItlvD~D~V 69 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVR--KITFVDNGTV 69 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCC--EEEEECCCBC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCC--EEEEecCCEe
Confidence 357999999999999999999999986 9999998754
No 413
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.72 E-value=0.07 Score=47.68 Aligned_cols=34 Identities=12% Similarity=0.290 Sum_probs=31.2
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
..+|.|||+|..|+..|..|++.|+ +|+++|++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~---~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGH---DVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCC---EEEEEECCH
Confidence 4689999999999999999999998 999999864
No 414
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=93.71 E-value=0.077 Score=44.30 Aligned_cols=36 Identities=22% Similarity=0.164 Sum_probs=31.7
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
++.+|.|||.|.-|...|..|++.|+ +|+++++++.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~---~V~~~dr~~~ 41 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGL---STWGADLNPQ 41 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC---eEEEEECCHH
Confidence 34689999999999999999999998 9999998643
No 415
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=93.70 E-value=0.086 Score=44.39 Aligned_cols=37 Identities=19% Similarity=0.366 Sum_probs=30.8
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~ 86 (306)
+++.+|+|||+|..|.++|..|+..+. -.++.++|..
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~-~~ei~L~Di~ 40 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSI-VDELVIIDLD 40 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCS-CSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCC
Confidence 445799999999999999999998875 2378888864
No 416
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.68 E-value=0.058 Score=44.95 Aligned_cols=35 Identities=14% Similarity=0.086 Sum_probs=31.9
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
+.+|.|||.|.-|...|..|++.|+ +|+++++++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~---~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPG---GVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTT---CEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC---eEEEEeCCHH
Confidence 4689999999999999999999998 8999998754
No 417
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=93.65 E-value=0.066 Score=44.40 Aligned_cols=37 Identities=19% Similarity=0.332 Sum_probs=33.2
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
+..+|+|||+|-.|..+|.+|++.|.. +++|+|.+..
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG--~i~lvD~D~V 71 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIG--KLLLFDYDKV 71 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCS--EEEEECCCBC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCC--EEEEECCCcc
Confidence 356999999999999999999999985 9999998754
No 418
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=93.59 E-value=0.087 Score=45.65 Aligned_cols=36 Identities=19% Similarity=0.089 Sum_probs=31.9
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
...+|+|||+|.+|+.++..+...|. +|+++|+...
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga---~V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGA---VVMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 45799999999999999999999997 8999997643
No 419
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.58 E-value=0.095 Score=44.11 Aligned_cols=35 Identities=17% Similarity=0.370 Sum_probs=30.6
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+.+|+|||+|..|...|..|++.|+. +|+++|.+.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~--~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLA--DVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC--EEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCc--eEEEEeCCc
Confidence 46899999999999999999999863 699998764
No 420
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=93.52 E-value=0.1 Score=46.20 Aligned_cols=37 Identities=22% Similarity=0.336 Sum_probs=33.0
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
+..++|.|||+|.-|...|..|++.|+ +|+++|.++.
T Consensus 52 ~~i~kVaVIGaG~MG~~IA~~la~aG~---~V~l~D~~~e 88 (460)
T 3k6j_A 52 YDVNSVAIIGGGTMGKAMAICFGLAGI---ETFLVVRNEQ 88 (460)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCHH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCC---eEEEEECcHH
Confidence 345689999999999999999999998 9999998754
No 421
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=93.52 E-value=0.036 Score=47.67 Aligned_cols=32 Identities=16% Similarity=0.270 Sum_probs=29.8
Q ss_pred cEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 53 EFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 53 ~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+|.|||+|.-|.+.|..|.+.|+ +|++++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~---~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCR---EVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEE---EEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCC---EEEEEECCH
Confidence 89999999999999999999998 999999864
No 422
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=93.45 E-value=0.086 Score=44.69 Aligned_cols=38 Identities=8% Similarity=0.133 Sum_probs=30.3
Q ss_pred CCCCCcEEEEcC-ChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 48 ANENREFVIVGG-GNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 48 ~~~~~~vvIIGg-G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
..+.+.|+|.|| |..|..++..|.+.|+ +|+++++...
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~---~V~~~~r~~~ 54 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGR---TVRGFDLRPS 54 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTC---CEEEEESSCC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCC---EEEEEeCCCC
Confidence 345678999998 9999999999999998 9999988653
No 423
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=93.44 E-value=0.11 Score=43.79 Aligned_cols=37 Identities=16% Similarity=0.307 Sum_probs=31.9
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
|...+|+|||+|..|.++|..|+..++. +|.++|...
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~--~v~l~Di~~ 39 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLG--DVVLFDIAQ 39 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCC--EEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCc--eEEEEeCCh
Confidence 4457899999999999999999999873 899998764
No 424
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.42 E-value=0.031 Score=40.99 Aligned_cols=34 Identities=18% Similarity=0.309 Sum_probs=29.8
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
..+|+|||+|..|..+|..|.+.|. +|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~---~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQY---KVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTC---EEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC---EEEEEcCCH
Confidence 5689999999999999999998886 788988753
No 425
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=93.40 E-value=0.091 Score=44.30 Aligned_cols=39 Identities=21% Similarity=0.270 Sum_probs=30.8
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCC-CCCcEEEeccCC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGM-ADGRLCIVSKEA 87 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~-~~~~V~vie~~~ 87 (306)
+++.+|.|||+|.-|.+.|..|.+.|. +..+|++++++.
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 344589999999999999999999982 112899998864
No 426
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=93.36 E-value=0.076 Score=43.95 Aligned_cols=34 Identities=18% Similarity=0.320 Sum_probs=31.0
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
++|.|||.|.-|...|..|.+.|+ +|+++++++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~---~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGF---DVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTC---CEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCC---eEEEEcCCHH
Confidence 479999999999999999999998 8999998754
No 427
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=93.33 E-value=0.09 Score=44.30 Aligned_cols=36 Identities=22% Similarity=0.302 Sum_probs=32.0
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
...+|.|||.|.-|...|..|++.|+ +|++++++..
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~---~V~~~dr~~~ 65 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGY---ALQVWNRTPA 65 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTC---EEEEECSCHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCC---eEEEEcCCHH
Confidence 34689999999999999999999998 8999998643
No 428
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=93.32 E-value=0.078 Score=47.19 Aligned_cols=38 Identities=24% Similarity=0.265 Sum_probs=32.7
Q ss_pred CEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecC
Q 021871 264 VKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPY 304 (306)
Q Consensus 264 v~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g 304 (306)
++|+++++|++|+.. ++.+ .|++.+| ++.+|.||+|+|
T Consensus 249 ~~i~~~~~V~~i~~~-~~~~-~v~~~~g-~~~ad~vV~a~p 286 (475)
T 3lov_A 249 SEIRLETPLLAISRE-DGRY-RLKTDHG-PEYADYVLLTIP 286 (475)
T ss_dssp CEEESSCCCCEEEEE-TTEE-EEECTTC-CEEESEEEECSC
T ss_pred CEEEcCCeeeEEEEe-CCEE-EEEECCC-eEECCEEEECCC
Confidence 799999999999974 4445 5888888 899999999987
No 429
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=93.32 E-value=0.078 Score=47.86 Aligned_cols=40 Identities=25% Similarity=0.302 Sum_probs=33.6
Q ss_pred CEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecC
Q 021871 264 VKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPY 304 (306)
Q Consensus 264 v~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g 304 (306)
.+|+++++|++|...+++.+ .|++.+|+++.+|.||+|+|
T Consensus 215 ~~i~~~~~V~~I~~~~~~~v-~v~~~~g~~~~ad~VI~t~p 254 (516)
T 1rsg_A 215 NWLKLSCEVKSITREPSKNV-TVNCEDGTVYNADYVIITVP 254 (516)
T ss_dssp GGEETTCCEEEEEECTTSCE-EEEETTSCEEEEEEEEECCC
T ss_pred CEEEECCEEEEEEEcCCCeE-EEEECCCcEEECCEEEECCC
Confidence 57999999999997434444 68999998899999999987
No 430
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=93.31 E-value=0.11 Score=40.12 Aligned_cols=33 Identities=15% Similarity=0.381 Sum_probs=30.1
Q ss_pred CcEEEEcC-ChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 52 REFVIVGG-GNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 52 ~~vvIIGg-G~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+.|+|+|| |..|..++..|.+.|+ +|++++++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~---~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGY---EVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC---EEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC---eEEEEEeCh
Confidence 57999998 9999999999999997 999998764
No 431
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=93.29 E-value=0.11 Score=43.47 Aligned_cols=35 Identities=11% Similarity=0.211 Sum_probs=31.2
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
..+|.|||+|.-|...|..|.+.|+ +|++++++..
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~---~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGH---TVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTC---CEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCC---EEEEEeCCHH
Confidence 4689999999999999999999998 8999987643
No 432
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=93.26 E-value=0.11 Score=43.70 Aligned_cols=36 Identities=19% Similarity=0.236 Sum_probs=30.6
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+.+|+|||+|..|.++|..|+..+. -.+|.++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~-~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQT-ANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-SSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCCh
Confidence 4689999999999999999999875 34799999753
No 433
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=93.23 E-value=0.088 Score=43.87 Aligned_cols=34 Identities=15% Similarity=0.263 Sum_probs=31.1
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+.+|.|||.|.-|...|..|.+.|+ +|++++++.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~---~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGY---LLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTC---EEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCC---eEEEEcCCH
Confidence 4689999999999999999999998 999998764
No 434
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=93.22 E-value=0.063 Score=44.96 Aligned_cols=31 Identities=16% Similarity=0.443 Sum_probs=28.9
Q ss_pred CcEEEEcCChHHHHHHHHHHHc-----C-CCCCcEEEecc
Q 021871 52 REFVIVGGGNAAGYAARTFVEH-----G-MADGRLCIVSK 85 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~-----g-~~~~~V~vie~ 85 (306)
.+|.|||+|.-|...|..|.+. | + +|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~---~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLL---EVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSE---EEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCC---CEEEEEc
Confidence 4899999999999999999998 8 7 8999987
No 435
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=93.21 E-value=0.097 Score=43.82 Aligned_cols=32 Identities=19% Similarity=0.268 Sum_probs=29.4
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
.+|+|||+|--|.+.|..|. .|. +|++++++.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~---~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYH---DVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTS---EEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCC---ceEEEECCH
Confidence 58999999999999999999 887 999999875
No 436
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=93.19 E-value=0.11 Score=43.87 Aligned_cols=42 Identities=14% Similarity=0.243 Sum_probs=33.2
Q ss_pred eecccCCCCCcEEEEcC-ChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 43 AYSSFANENREFVIVGG-GNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 43 ~~~~~~~~~~~vvIIGg-G~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+..+...+.+.|+|.|| |..|..++..|.+.|+ +|+++++..
T Consensus 12 ~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~---~V~~~~r~~ 54 (330)
T 2pzm_A 12 SGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGH---EILVIDNFA 54 (330)
T ss_dssp --CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTC---EEEEEECCS
T ss_pred cCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCC---EEEEEECCC
Confidence 33334455578999998 9999999999999998 999998753
No 437
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.17 E-value=0.1 Score=46.45 Aligned_cols=35 Identities=17% Similarity=0.248 Sum_probs=31.6
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
...+|.|||+|.-|...|..|++.|+ +|+++|+++
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~---~V~l~D~~~ 70 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGI---SVVAVESDP 70 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTC---EEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCC---eEEEEECCH
Confidence 34689999999999999999999998 999999764
No 438
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.17 E-value=0.11 Score=44.65 Aligned_cols=34 Identities=29% Similarity=0.380 Sum_probs=30.8
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
..+|+|+|+|.+|+.++..|...|. +|++++++.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga---~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGA---QVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC---EEEEEeCCH
Confidence 4789999999999999999999997 899998763
No 439
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.15 E-value=0.14 Score=43.26 Aligned_cols=35 Identities=20% Similarity=0.379 Sum_probs=30.3
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+.+|+|||+|..|..+|..|+..|+- +|.++|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~--~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLG--DVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCC--EEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC--eEEEEeCCH
Confidence 45899999999999999999999873 599998653
No 440
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=93.14 E-value=0.1 Score=43.19 Aligned_cols=34 Identities=21% Similarity=0.343 Sum_probs=31.0
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
++|.|||.|.-|...|..|.+.|+ +|++++++..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~---~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC---SVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC---eEEEEcCCHH
Confidence 479999999999999999999998 9999998754
No 441
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=93.11 E-value=0.11 Score=44.15 Aligned_cols=36 Identities=14% Similarity=0.266 Sum_probs=30.5
Q ss_pred CCCCcEEEEcC-ChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 49 NENREFVIVGG-GNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 49 ~~~~~vvIIGg-G~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
|.+++|+|.|| |..|..++..|.+.|+ +|.++.+..
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~---~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHR---PTYILARPG 44 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTC---CEEEEECSS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCC---CEEEEECCC
Confidence 34568999999 9999999999999997 899998865
No 442
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=93.10 E-value=0.13 Score=42.23 Aligned_cols=34 Identities=12% Similarity=0.254 Sum_probs=30.6
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~ 86 (306)
..+.++|+|+|-.|.++|+.|.+.|. +|++++++
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~---~V~v~~R~ 151 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDC---AVTITNRT 151 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCC---EEEEEECC
Confidence 45789999999999999999999996 89998875
No 443
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=93.07 E-value=0.13 Score=43.18 Aligned_cols=36 Identities=11% Similarity=0.362 Sum_probs=30.5
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~ 86 (306)
++.+|+|||+|..|.+.|+.|+..+. -.+|.++|.+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~-~~ev~l~Di~ 40 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGI-ADEIVLIDAN 40 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCC-CCEEEEEeCC
Confidence 45699999999999999999998875 3379999875
No 444
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.07 E-value=0.12 Score=43.42 Aligned_cols=36 Identities=11% Similarity=0.275 Sum_probs=30.5
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+.+|+|||+|..|...|..|++.|+ -.+|+++|++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~-~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGI-AREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-CSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCCh
Confidence 3589999999999999999999885 23799998763
No 445
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=93.05 E-value=0.14 Score=43.50 Aligned_cols=36 Identities=22% Similarity=0.334 Sum_probs=30.6
Q ss_pred CCCcEEEEcC-ChHHHHHHHHHHHcCCCCCcEEEeccC
Q 021871 50 ENREFVIVGG-GNAAGYAARTFVEHGMADGRLCIVSKE 86 (306)
Q Consensus 50 ~~~~vvIIGg-G~aGl~aA~~L~~~g~~~~~V~vie~~ 86 (306)
...+|+|||+ |..|.++|+.|..+|. ..+|.++|..
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~-~~evvLiDi~ 43 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRL-TPNLCLYDPF 43 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTC-CSCEEEECSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCC-CCEEEEEeCC
Confidence 3568999998 9999999999999985 2379999964
No 446
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=93.05 E-value=0.15 Score=42.70 Aligned_cols=36 Identities=17% Similarity=0.292 Sum_probs=32.0
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
+..+|.|||.|.-|...|..|.+.|+ +|++++++..
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~---~V~~~dr~~~ 43 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGK---RVAIWNRSPG 43 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 34689999999999999999999998 8999998643
No 447
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.04 E-value=0.084 Score=41.70 Aligned_cols=35 Identities=14% Similarity=0.310 Sum_probs=31.0
Q ss_pred CCcEEEEcC-ChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 51 NREFVIVGG-GNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 51 ~~~vvIIGg-G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
+++|+|.|| |..|..++..|.+.|+ +|+++++...
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~---~V~~~~r~~~ 39 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGF---EVTAVVRHPE 39 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTC---EEEEECSCGG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEEcCcc
Confidence 468999996 9999999999999998 9999998744
No 448
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=93.01 E-value=0.12 Score=42.53 Aligned_cols=38 Identities=21% Similarity=0.522 Sum_probs=32.4
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
+.+|.|||+|.-|.+.|..|.+.|++..+|++++++..
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~ 40 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLD 40 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHH
Confidence 46899999999999999999999874457999987643
No 449
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=92.99 E-value=0.12 Score=42.00 Aligned_cols=38 Identities=13% Similarity=0.131 Sum_probs=31.1
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCC-CCCcEEEeccCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGM-ADGRLCIVSKEAY 88 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~-~~~~V~vie~~~~ 88 (306)
+.+|.|||+|.-|.+.|..|.+.|+ +..+|++++++..
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 3579999999999999999999982 1128999998754
No 450
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=92.99 E-value=0.12 Score=46.14 Aligned_cols=36 Identities=17% Similarity=0.279 Sum_probs=32.3
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
..++|.|||+|.-|...|..|++.|+ +|+++|+++.
T Consensus 4 ~~~kVgVIGaG~MG~~IA~~la~aG~---~V~l~D~~~e 39 (483)
T 3mog_A 4 NVQTVAVIGSGTMGAGIAEVAASHGH---QVLLYDISAE 39 (483)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTC---CEEEECSCHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC---eEEEEECCHH
Confidence 35689999999999999999999998 9999998754
No 451
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=92.97 E-value=0.11 Score=46.55 Aligned_cols=34 Identities=18% Similarity=0.318 Sum_probs=30.2
Q ss_pred CCcEEEEcCChHHHHHHHHHHHc--CCCCCcEEEeccCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEA 87 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~--g~~~~~V~vie~~~ 87 (306)
+.+|.|||.|..|+..|..|++. |+ +|+++|++.
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~---~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHI---TVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTS---EEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCC---EEEEEECCH
Confidence 45899999999999999999999 56 899999754
No 452
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=92.95 E-value=0.12 Score=45.15 Aligned_cols=34 Identities=21% Similarity=0.248 Sum_probs=31.7
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcc
Q 021871 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (306)
Q Consensus 209 ~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~ 242 (306)
+|+|||+|..|+-.|..|++.+.+|+++++++.+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMI 35 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 6899999999999999999999999999998765
No 453
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.93 E-value=0.19 Score=36.50 Aligned_cols=33 Identities=15% Similarity=0.268 Sum_probs=30.5
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecC
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 239 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~ 239 (306)
..+++|+|.|..|..++..|.+.+.+|+++.+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 468999999999999999999999999999875
No 454
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=92.92 E-value=0.11 Score=43.58 Aligned_cols=35 Identities=20% Similarity=0.414 Sum_probs=30.0
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
.+|+|||+|..|.++|..|++.|. ..+|+++|++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~-~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGV-ADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-CSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEcCCH
Confidence 479999999999999999999984 22899999753
No 455
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=92.91 E-value=0.14 Score=43.19 Aligned_cols=36 Identities=14% Similarity=0.370 Sum_probs=30.6
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~ 86 (306)
...+|+|||+|..|.++|+.|+..++ -.+++++|..
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~-~~~l~l~D~~ 39 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGI-TDELVVIDVN 39 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-CceEEEEecc
Confidence 35689999999999999999999886 2379999864
No 456
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.89 E-value=0.12 Score=43.83 Aligned_cols=35 Identities=17% Similarity=0.329 Sum_probs=31.2
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+..+|.|||+|.-|...|..|.+.|+ +|++++++.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~---~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGE---EVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCC---eEEEEeCCH
Confidence 34689999999999999999999998 999998863
No 457
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=92.87 E-value=0.11 Score=46.12 Aligned_cols=52 Identities=13% Similarity=0.127 Sum_probs=38.6
Q ss_pred CHHHHHHHHHHHHHcCCEEEcCceEEEEEeCCCCcEEEEEe---CCCCEEecCEEEEecC
Q 021871 248 TPSLAQRYEQLYQQNGVKFVKGASIKNLEAGSDGRVAAVKL---EDGSTIDADTVILLPY 304 (306)
Q Consensus 248 ~~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~v~~v~~---~~G~~i~~d~vv~a~g 304 (306)
...+.+.+.+.+ |++|+++++|++|+..++ .+ .|++ .+|+++.+|.||+|+|
T Consensus 237 ~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~-~~-~v~~~~~~~g~~~~ad~vV~a~~ 291 (478)
T 2ivd_A 237 LQVLIDALAASL---GDAAHVGARVEGLAREDG-GW-RLIIEEHGRRAELSVAQVVLAAP 291 (478)
T ss_dssp THHHHHHHHHHH---GGGEESSEEEEEEECC---CC-EEEEEETTEEEEEECSEEEECSC
T ss_pred HHHHHHHHHHHh---hhhEEcCCEEEEEEecCC-eE-EEEEeecCCCceEEcCEEEECCC
Confidence 445555555554 678999999999997444 44 6777 6777899999999987
No 458
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=92.85 E-value=0.12 Score=44.28 Aligned_cols=37 Identities=16% Similarity=0.411 Sum_probs=33.1
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
+..+|+|||+|-.|..+|.+|++.|.. +++++|.+..
T Consensus 117 ~~~~VlvvG~GglGs~va~~La~aGvg--~i~lvD~D~V 153 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILATSGIG--EIILIDNDQI 153 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCS--EEEEEECCBC
T ss_pred hCCeEEEECCCHHHHHHHHHHHhCCCC--eEEEECCCcC
Confidence 357999999999999999999999986 8999998754
No 459
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=92.85 E-value=0.13 Score=45.46 Aligned_cols=35 Identities=20% Similarity=0.360 Sum_probs=32.4
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
..++.|||.|.-|+..|..|++.|+ +|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~---~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGH---EVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 4689999999999999999999999 9999998765
No 460
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.83 E-value=0.13 Score=44.32 Aligned_cols=35 Identities=26% Similarity=0.421 Sum_probs=31.2
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
....|+|+|+|..|+.+|..|...|. +|+++++..
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga---~V~~~d~~~ 199 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGA---QVTILDVNH 199 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC---EEEEEECCH
Confidence 35789999999999999999999998 899998753
No 461
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=92.76 E-value=0.15 Score=41.63 Aligned_cols=34 Identities=18% Similarity=0.440 Sum_probs=30.7
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
.++++|||+|-+|-++|+.|.+.|. +|+|+.+..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~---~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGL---QVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC---EEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC---EEEEEeCCH
Confidence 5789999999999999999999995 999998763
No 462
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=92.75 E-value=0.12 Score=45.48 Aligned_cols=34 Identities=9% Similarity=0.017 Sum_probs=30.4
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
..+|.|||.|..|+..|..|++ |+ +|+++|.++.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~---~V~~~D~~~~ 69 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NH---EVVALDIVQA 69 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TS---EEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CC---eEEEEecCHH
Confidence 4589999999999999999998 88 9999998644
No 463
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=92.74 E-value=0.13 Score=42.73 Aligned_cols=35 Identities=9% Similarity=0.114 Sum_probs=31.1
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
.+++|.|||+|.-|...|..|+ .|+ +|+++|+++.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~---~V~v~d~~~~ 45 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKH---EVVLQDVSEK 45 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTS---EEEEECSCHH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCC---EEEEEECCHH
Confidence 3579999999999999999999 998 9999998653
No 464
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=92.74 E-value=0.11 Score=45.74 Aligned_cols=34 Identities=21% Similarity=0.360 Sum_probs=31.3
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCC
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPEN 240 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~ 240 (306)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4689999999999999999999999999999875
No 465
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.70 E-value=0.16 Score=43.01 Aligned_cols=35 Identities=11% Similarity=0.247 Sum_probs=30.4
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+.+|+|||+|..|..+|..|+..|+- +|+++|.+.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~--~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLG--DVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCC--EEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC--eEEEEECCH
Confidence 35899999999999999999999873 599999764
No 466
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=92.63 E-value=0.1 Score=46.02 Aligned_cols=44 Identities=16% Similarity=0.196 Sum_probs=33.8
Q ss_pred HHcCCEEEcCceEEEEEeCCCCcEEEEEeCCCCEEecCEEEEecCC
Q 021871 260 QQNGVKFVKGASIKNLEAGSDGRVAAVKLEDGSTIDADTVILLPYD 305 (306)
Q Consensus 260 ~~~gv~i~~~~~v~~i~~~~~~~v~~v~~~~G~~i~~d~vv~a~g~ 305 (306)
++.|++|+++++|++|..++++.+ .|++ +|+++.+|.||+|+|.
T Consensus 223 ~~lg~~i~~~~~V~~i~~~~~~~v-~v~~-~~~~~~ad~VI~a~p~ 266 (453)
T 2yg5_A 223 EALGDDVFLNAPVRTVKWNESGAT-VLAD-GDIRVEASRVILAVPP 266 (453)
T ss_dssp HHHGGGEECSCCEEEEEEETTEEE-EEET-TTEEEEEEEEEECSCG
T ss_pred HhcCCcEEcCCceEEEEEeCCceE-EEEE-CCeEEEcCEEEEcCCH
Confidence 344789999999999997433314 4766 6778999999999874
No 467
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=92.62 E-value=0.14 Score=44.17 Aligned_cols=35 Identities=26% Similarity=0.372 Sum_probs=31.4
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
...+|+|||+|..|+.+|..+...|. +|+++|+..
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga---~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGA---TVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC---EEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC---EEEEEeCCH
Confidence 45789999999999999999999997 899999763
No 468
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=92.58 E-value=0.15 Score=42.81 Aligned_cols=34 Identities=18% Similarity=0.368 Sum_probs=28.5
Q ss_pred cEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 53 EFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 53 ~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+|+|||+|..|.+.|..|++.+. ..+|+++|.++
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~-g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQL-ARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-CSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCCh
Confidence 69999999999999999998632 22899999864
No 469
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=92.55 E-value=0.14 Score=43.15 Aligned_cols=32 Identities=16% Similarity=0.378 Sum_probs=28.7
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~ 86 (306)
+.+|+|||+|.-|.+.|..|++.|+ +|+++ ++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~---~V~l~-~~ 50 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGH---EVILI-AR 50 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTC---EEEEE-CC
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCC---eEEEE-Ec
Confidence 4689999999999999999999998 89998 54
No 470
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=92.52 E-value=0.17 Score=41.71 Aligned_cols=34 Identities=15% Similarity=0.313 Sum_probs=30.8
Q ss_pred CCcEEEEcC-ChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 51 NREFVIVGG-GNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 51 ~~~vvIIGg-G~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+.+|.|||+ |.-|...|..|.+.|+ +|++++++.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~---~V~~~~r~~ 45 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAH---HLAAIEIAP 45 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSS---EEEEECCSH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC---EEEEEECCH
Confidence 358999999 9999999999999998 999999764
No 471
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=92.52 E-value=0.12 Score=45.97 Aligned_cols=34 Identities=15% Similarity=0.349 Sum_probs=30.4
Q ss_pred CCcEEEEcCChHHHHHHHHHHHc--CCCCCcEEEeccCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEH--GMADGRLCIVSKEA 87 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~--g~~~~~V~vie~~~ 87 (306)
+.+|.|||.|..|+..|..|++. |+ +|+++|++.
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~---~V~~~d~~~ 40 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEI---RVTVVDVNE 40 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTS---EEEEECSCH
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCC---EEEEEECCH
Confidence 35899999999999999999999 66 899999764
No 472
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=92.50 E-value=0.14 Score=43.63 Aligned_cols=37 Identities=16% Similarity=0.284 Sum_probs=33.2
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
...+|+|||+|-.|..+|+.|++.|.. +++|+|.+..
T Consensus 35 ~~~~VlivG~GGlG~~ia~~La~~Gvg--~itlvD~d~V 71 (346)
T 1y8q_A 35 RASRVLLVGLKGLGAEIAKNLILAGVK--GLTMLDHEQV 71 (346)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCS--EEEEECCCBC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCC--EEEEEECCCc
Confidence 357999999999999999999999986 9999998754
No 473
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=92.44 E-value=0.12 Score=43.37 Aligned_cols=34 Identities=21% Similarity=0.149 Sum_probs=31.3
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcC-CCCCcEEEeccCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHG-MADGRLCIVSKEA 87 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g-~~~~~V~vie~~~ 87 (306)
+.+|.|||.|.-|...|..|++.| + +|++++++.
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~---~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAA---RLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCS---EEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCC---eEEEEeCCC
Confidence 468999999999999999999999 8 999999875
No 474
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=92.43 E-value=0.067 Score=45.09 Aligned_cols=65 Identities=15% Similarity=0.168 Sum_probs=42.9
Q ss_pred CCeEEEEcCCHHHHHHHHHHHh--CCCcEEEEecCCccccccc------C-HHHHHHHHHHHHHcCCEEEcCce
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVG--WKLDTTIIFPENHLLQRLF------T-PSLAQRYEQLYQQNGVKFVKGAS 271 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~--~~~~v~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~gv~i~~~~~ 271 (306)
...|+|||+|+.|+-.|..|++ .+.+|+++.+.+.+..... + ..+...+.+.+++.|+++..+..
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~~~~~~~ 138 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGD 138 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCCCEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCEEEECCc
Confidence 3469999999999999999974 5889999998876532110 0 01112234455666776665544
No 475
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=92.39 E-value=0.083 Score=45.11 Aligned_cols=35 Identities=23% Similarity=0.251 Sum_probs=31.2
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcC-------CCCCcEEEeccCCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHG-------MADGRLCIVSKEAY 88 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g-------~~~~~V~vie~~~~ 88 (306)
+.+|.|||+|.-|.+.|..|++.| + +|+++++++.
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~---~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDP---RVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEE---EEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCC---eEEEEEcChh
Confidence 358999999999999999999998 6 8999998754
No 476
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=92.37 E-value=0.13 Score=42.64 Aligned_cols=34 Identities=12% Similarity=0.157 Sum_probs=30.5
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+.+|.|||+|..|...|..|.+.|+ +|+++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~---~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGV---TVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTC---EEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCC---eEEEEeCCH
Confidence 4589999999999999999999998 899998754
No 477
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=92.34 E-value=0.12 Score=45.51 Aligned_cols=32 Identities=19% Similarity=0.213 Sum_probs=29.7
Q ss_pred cEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 53 EFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 53 ~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+|.|||+|..|+..|..|++.|+ +|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~---~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGH---EVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC---EEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCC---EEEEEECCH
Confidence 69999999999999999999998 899999764
No 478
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=92.33 E-value=0.13 Score=46.06 Aligned_cols=37 Identities=27% Similarity=0.359 Sum_probs=33.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccc
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL 243 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~ 243 (306)
..+|+|||+|.+|+..|..|.+.+.+|+++.+.+++.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~g 69 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPG 69 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSB
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCC
Confidence 5689999999999999999999999999998876543
No 479
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.29 E-value=0.18 Score=42.29 Aligned_cols=34 Identities=12% Similarity=0.292 Sum_probs=29.5
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
.+|+|||+|..|...|..|+..|+- +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~--~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELG--DIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCS--EEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCC--eEEEEeCCc
Confidence 5899999999999999999999853 599998653
No 480
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=92.27 E-value=0.17 Score=44.22 Aligned_cols=35 Identities=23% Similarity=0.121 Sum_probs=32.2
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCccc
Q 021871 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHLL 243 (306)
Q Consensus 209 ~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~~ 243 (306)
+|+|||+|..|+-.|..|++.+.+|+++++++.+.
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~G 36 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITG 36 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSB
T ss_pred cEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCC
Confidence 68999999999999999999999999999987653
No 481
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=92.23 E-value=0.16 Score=44.40 Aligned_cols=34 Identities=24% Similarity=0.415 Sum_probs=31.3
Q ss_pred eEEEEcCCHHHHHHHHHHHhCCCcEEEEecCCcc
Q 021871 209 KVVVVGGGYIGMEVAAAAVGWKLDTTIIFPENHL 242 (306)
Q Consensus 209 ~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~~~~ 242 (306)
+|+|||+|..|+-.|..|++.|.+|+++++.+++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCc
Confidence 5899999999999999999999999999987654
No 482
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=92.23 E-value=0.21 Score=39.24 Aligned_cols=34 Identities=18% Similarity=0.317 Sum_probs=29.3
Q ss_pred CCcEEEEcC-ChHHHHHHHHHH-HcCCCCCcEEEeccCC
Q 021871 51 NREFVIVGG-GNAAGYAARTFV-EHGMADGRLCIVSKEA 87 (306)
Q Consensus 51 ~~~vvIIGg-G~aGl~aA~~L~-~~g~~~~~V~vie~~~ 87 (306)
++.|+|.|| |..|..++..|+ +.|+ +|+++.++.
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~---~V~~~~r~~ 40 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDM---HITLYGRQL 40 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCC---EEEEEESSH
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCc---eEEEEecCc
Confidence 356999995 999999999999 8998 999998763
No 483
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=92.21 E-value=0.2 Score=41.73 Aligned_cols=35 Identities=31% Similarity=0.517 Sum_probs=31.2
Q ss_pred CCcEEEEc-CChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 51 NREFVIVG-GGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 51 ~~~vvIIG-gG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
..+|.||| .|.-|.+.|..|.+.|+ +|++++++..
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~---~V~~~~~~~~ 56 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGY---PISILDREDW 56 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTC---CEEEECTTCG
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCC---eEEEEECCcc
Confidence 35899999 99999999999999998 8999987653
No 484
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=92.14 E-value=0.18 Score=41.90 Aligned_cols=36 Identities=11% Similarity=0.339 Sum_probs=31.1
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
..++++|||+|-+|..+|..|.+.|.. +|+|+++..
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~--~V~v~nR~~ 175 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAE--RIDMANRTV 175 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCS--EEEEECSSH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCC--EEEEEeCCH
Confidence 457899999999999999999999864 799988763
No 485
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=92.13 E-value=0.12 Score=44.50 Aligned_cols=34 Identities=15% Similarity=0.266 Sum_probs=30.6
Q ss_pred CcEEEEcCChHHHHHHHHHHHcC-------CCCCcEEEeccCCC
Q 021871 52 REFVIVGGGNAAGYAARTFVEHG-------MADGRLCIVSKEAY 88 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g-------~~~~~V~vie~~~~ 88 (306)
.+|.|||+|.-|.+.|..|++.| + +|++++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~---~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFEN---EVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCS---CEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCC---eEEEEECChh
Confidence 47999999999999999999998 6 8999998654
No 486
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=92.13 E-value=0.19 Score=39.35 Aligned_cols=32 Identities=19% Similarity=0.331 Sum_probs=29.1
Q ss_pred cEEEEcC-ChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 53 EFVIVGG-GNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 53 ~vvIIGg-G~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+|+|.|| |..|..++..|.++|+ +|+++.++.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~---~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGH---EVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC---EEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCC---EEEEEEcCc
Confidence 6999996 9999999999999998 999998864
No 487
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=92.12 E-value=0.2 Score=41.72 Aligned_cols=36 Identities=25% Similarity=0.427 Sum_probs=31.7
Q ss_pred CCCcEEEEcC-ChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 50 ENREFVIVGG-GNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 50 ~~~~vvIIGg-G~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
++++|+|.|| |..|..++.+|.+.|+ +|+++++...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGE---EVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC---CEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCC---EEEEEecCCc
Confidence 3578999999 9999999999999998 9999988654
No 488
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=92.09 E-value=0.2 Score=43.19 Aligned_cols=37 Identities=24% Similarity=0.368 Sum_probs=33.2
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecC-Cccc
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE-NHLL 243 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~-~~~~ 243 (306)
..+|+|||+|.+|+-.|..|.+.+.+|+++++. +++.
T Consensus 44 ~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vG 81 (376)
T 2e1m_A 44 PKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVG 81 (376)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCB
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccC
Confidence 568999999999999999999999999999988 5543
No 489
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=92.09 E-value=0.17 Score=45.00 Aligned_cols=36 Identities=22% Similarity=0.326 Sum_probs=32.5
Q ss_pred CeEEEEcCCHHHHHHHHHHHhCCC--cEEEEecCCccc
Q 021871 208 KKVVVVGGGYIGMEVAAAAVGWKL--DTTIIFPENHLL 243 (306)
Q Consensus 208 ~~v~viG~g~~a~e~a~~l~~~~~--~v~~~~~~~~~~ 243 (306)
.+|+|||+|.+|+-.|..|++.+. +|+++++.+++.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~G 40 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLG 40 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSB
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCC
Confidence 579999999999999999999998 999999876653
No 490
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=92.09 E-value=0.17 Score=46.22 Aligned_cols=35 Identities=14% Similarity=0.237 Sum_probs=32.5
Q ss_pred CcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCCC
Q 021871 52 REFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAYA 89 (306)
Q Consensus 52 ~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~~ 89 (306)
.+++|+|+|..|...|..|.+.|+ +|+++|+++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~---~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPV---PFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC---CEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC---CEEEEECChHH
Confidence 789999999999999999999998 99999988653
No 491
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=92.08 E-value=0.19 Score=43.86 Aligned_cols=36 Identities=19% Similarity=0.328 Sum_probs=32.5
Q ss_pred CCeEEEEcCCHHHHHHHHHHHhCC-CcEEEEecCCcc
Q 021871 207 AKKVVVVGGGYIGMEVAAAAVGWK-LDTTIIFPENHL 242 (306)
Q Consensus 207 ~~~v~viG~g~~a~e~a~~l~~~~-~~v~~~~~~~~~ 242 (306)
..+|+|||+|.+|+-.|..|++.+ .+|+++++.+++
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHV 42 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCC
Confidence 467999999999999999999999 899999987664
No 492
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=92.01 E-value=0.19 Score=41.95 Aligned_cols=34 Identities=26% Similarity=0.363 Sum_probs=29.6
Q ss_pred cEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 53 EFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 53 ~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+|+|||+|..|.+.|..|+..|+ -.+|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~-~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGS-CSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-CSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCCH
Confidence 79999999999999999999886 33799999763
No 493
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=92.01 E-value=0.19 Score=41.90 Aligned_cols=36 Identities=19% Similarity=0.381 Sum_probs=30.1
Q ss_pred CCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 51 NREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 51 ~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
+.+|+|||+|..|..+|+.|+..++ -.+|.++|...
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~-~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGI-ADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCC-CCEEEEEcCCc
Confidence 4689999999999999999998886 34799998754
No 494
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=91.99 E-value=0.55 Score=39.40 Aligned_cols=33 Identities=18% Similarity=0.302 Sum_probs=28.5
Q ss_pred cCCeEEEEcCCHHHHHHHHHHHhCCCcEEEEecC
Q 021871 206 KAKKVVVVGGGYIGMEVAAAAVGWKLDTTIIFPE 239 (306)
Q Consensus 206 ~~~~v~viG~g~~a~e~a~~l~~~~~~v~~~~~~ 239 (306)
...+|+|||+|..|.-+|..|++.+.+|+++ +.
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 4678999999999999999999999999988 53
No 495
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=91.99 E-value=0.17 Score=42.45 Aligned_cols=35 Identities=17% Similarity=0.214 Sum_probs=30.2
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~ 86 (306)
.+.+|.|||.|.-|...|..|++.|+. +|++++++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~--~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAI--DMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCC--EEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCC--eEEEEcCC
Confidence 346899999999999999999999864 79999985
No 496
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=91.97 E-value=0.19 Score=41.86 Aligned_cols=35 Identities=20% Similarity=0.310 Sum_probs=31.3
Q ss_pred CCCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccC
Q 021871 49 NENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKE 86 (306)
Q Consensus 49 ~~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~ 86 (306)
...++|.|||+|..|..+|+.|...|. +|+++++.
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~G~---~V~~~d~~ 189 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAALGA---NVKVGARS 189 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHTTC---EEEEEESS
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCC---EEEEEECC
Confidence 345789999999999999999999997 89999875
No 497
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.96 E-value=0.15 Score=41.89 Aligned_cols=35 Identities=14% Similarity=0.302 Sum_probs=31.0
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEA 87 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~ 87 (306)
..++++|+|+|-+|.++|+.|.+.|. +|+|+++..
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G~---~v~v~~R~~ 152 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQQ---NIVLANRTF 152 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTC---EEEEEESSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC---EEEEEECCH
Confidence 45689999999999999999999995 999998763
No 498
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=91.95 E-value=0.19 Score=44.87 Aligned_cols=36 Identities=11% Similarity=0.303 Sum_probs=32.2
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
.+.+|.|||.|.-|...|..|++.|+ +|++++++..
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~---~V~v~dr~~~ 38 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGF---VVCAFNRTVS 38 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTC---CEEEECSSTH
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCC---EEEEEeCCHH
Confidence 34689999999999999999999998 9999998754
No 499
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=91.95 E-value=0.22 Score=43.11 Aligned_cols=36 Identities=19% Similarity=0.368 Sum_probs=32.2
Q ss_pred CCCcEEEEcCChHHHHHHHHHHHcCCCCCcEEEeccCCC
Q 021871 50 ENREFVIVGGGNAAGYAARTFVEHGMADGRLCIVSKEAY 88 (306)
Q Consensus 50 ~~~~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~~~~ 88 (306)
..++|+|||+|..|..++..+.+.|+ +|.++++...
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~---~vi~~d~~~~ 48 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGY---KIAVLDPTKN 48 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTC---EEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC---EEEEEeCCCC
Confidence 35689999999999999999999999 9999997654
No 500
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=91.91 E-value=0.16 Score=42.93 Aligned_cols=30 Identities=20% Similarity=0.304 Sum_probs=28.6
Q ss_pred cEEEEcCChHHHHHHHHHHHcCCCCCcEEEecc
Q 021871 53 EFVIVGGGNAAGYAARTFVEHGMADGRLCIVSK 85 (306)
Q Consensus 53 ~vvIIGgG~aGl~aA~~L~~~g~~~~~V~vie~ 85 (306)
+|.|||+|..|...|..|.+.|+ +|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~---~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGN---EVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCC---EEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCC---eEEEEEc
Confidence 69999999999999999999998 9999998
Done!