Your job contains 1 sequence.
>021875
MSNSLYSFENDSLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIEEHVGTKTA
VQIRSHAQKFFSKVVRESNGSSESSIMPIEIPPPRPKRKPVHPYPRKSVDSLKATSVSNQ
QENFTSSNALVSDKDRQSPTSVVSAFNSDTLGCAASDQQNGCSSPTSCTTEMHSVNLLPI
EKENEYVTSISFPKEEKISTLPAHLSASSNVEELASVSKDSVYPKGDAAAAPSCTSIKLF
GRTVLVSDSWKPYSLGADSYKSPISKSSQENLDVDKKILSSQPHQSIWIHIYYLGWFLAI
VIHPHI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021875
(306 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2014114 - symbol:EPR1 "EARLY-PHYTOCHROME-RESPO... 316 6.7e-43 2
TAIR|locus:2169135 - symbol:RVE2 "REVEILLE 2" species:370... 303 3.1e-35 2
TAIR|locus:2167210 - symbol:RVE1 "REVEILLE 1" species:370... 319 5.0e-35 2
TAIR|locus:504955668 - symbol:AT3G10113 species:3702 "Ara... 316 4.3e-32 2
TAIR|locus:2200970 - symbol:LHY "LATE ELONGATED HYPOCOTYL... 285 7.8e-26 2
TAIR|locus:2044345 - symbol:CCA1 "circadian clock associa... 284 4.0e-24 1
TAIR|locus:2151251 - symbol:LCL1 "LHY/CCA1-like 1" specie... 225 2.3e-22 2
TAIR|locus:2025411 - symbol:ASG4 "ALTERED SEED GERMINATIO... 250 2.4e-21 1
TAIR|locus:2075049 - symbol:RVE8 "REVEILLE 8" species:370... 241 2.1e-20 1
TAIR|locus:2124928 - symbol:AT4G01280 species:3702 "Arabi... 239 3.5e-20 1
TAIR|locus:2149589 - symbol:AT5G52660 species:3702 "Arabi... 239 3.5e-20 1
DICTYBASE|DDB_G0288783 - symbol:mybG "myb domain-containi... 236 2.2e-19 1
DICTYBASE|DDB_G0274463 - symbol:mybJ "myb domain-containi... 153 5.0e-08 2
TAIR|locus:2042872 - symbol:AT2G38090 species:3702 "Arabi... 145 8.4e-08 1
TAIR|locus:2150149 - symbol:AT5G01200 species:3702 "Arabi... 143 1.0e-07 1
TAIR|locus:2171519 - symbol:AT5G47390 species:3702 "Arabi... 130 2.8e-07 2
TAIR|locus:2154508 - symbol:AT5G58900 species:3702 "Arabi... 140 3.0e-07 1
DICTYBASE|DDB_G0289151 - symbol:mybI "myb domain-containi... 147 3.8e-07 1
TAIR|locus:2166459 - symbol:AT5G05790 species:3702 "Arabi... 137 6.0e-07 1
DICTYBASE|DDB_G0277927 - symbol:mybH "SWIRM domain-contai... 149 6.4e-07 3
UNIPROTKB|Q8S9H7 - symbol:DIVARICATA "Transcription facto... 136 1.0e-06 1
TAIR|locus:2175478 - symbol:AT5G04760 species:3702 "Arabi... 130 1.5e-06 1
TAIR|locus:2171711 - symbol:AT5G23650 species:3702 "Arabi... 134 2.2e-06 1
TAIR|locus:2133667 - symbol:AT4G09450 species:3702 "Arabi... 125 4.3e-06 1
TAIR|locus:2074723 - symbol:AT3G11280 species:3702 "Arabi... 129 4.5e-06 1
TAIR|locus:2027181 - symbol:AT1G74840 species:3702 "Arabi... 128 6.0e-06 1
TAIR|locus:2075775 - symbol:AT3G10580 species:3702 "Arabi... 128 7.5e-06 1
TAIR|locus:2020653 - symbol:AT1G70000 species:3702 "Arabi... 124 1.7e-05 1
TAIR|locus:2151621 - symbol:AT5G61620 species:3702 "Arabi... 125 2.1e-05 1
TAIR|locus:2159607 - symbol:AT5G08520 species:3702 "Arabi... 122 4.1e-05 1
TAIR|locus:2094942 - symbol:AT3G16350 species:3702 "Arabi... 121 8.8e-05 1
TAIR|locus:2011216 - symbol:AT1G19000 species:3702 "Arabi... 117 0.00014 1
TAIR|locus:2028461 - symbol:AT1G49010 species:3702 "Arabi... 116 0.00022 1
TAIR|locus:2165106 - symbol:AT5G56840 species:3702 "Arabi... 113 0.00024 1
UNIPROTKB|J9P785 - symbol:MYSM1 "Uncharacterized protein"... 112 0.00047 2
UNIPROTKB|Q5F3F2 - symbol:MYSM1 "Histone H2A deubiquitina... 118 0.00058 1
ZFIN|ZDB-GENE-041014-28 - symbol:mysm1 "Myb-like, SWIRM a... 120 0.00090 2
TAIR|locus:504955890 - symbol:AT3G10595 species:3702 "Ara... 105 0.00093 1
>TAIR|locus:2014114 [details] [associations]
symbol:EPR1 "EARLY-PHYTOCHROME-RESPONSIVE1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0009723 "response to ethylene stimulus" evidence=IEP]
[GO:0046686 "response to cadmium ion" evidence=IEP] [GO:0007623
"circadian rhythm" evidence=IEP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 EMBL:CP002684
GO:GO:0046686 GO:GO:0009723 GO:GO:0003677 GO:GO:0007623
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AC013354 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00891668
RefSeq:NP_001117304.1 UniGene:At.27131 ProteinModelPortal:B3H5A8
SMR:B3H5A8 EnsemblPlants:AT1G18330.2 GeneID:838413
KEGG:ath:AT1G18330 TAIR:At1g18330 eggNOG:NOG263004
HOGENOM:HOG000064617 OMA:NSCTSDI PhylomeDB:B3H5A8
ProtClustDB:CLSN2682175 Genevestigator:B3H5A8 Uniprot:B3H5A8
Length = 372
Score = 316 (116.3 bits), Expect = 6.7e-43, Sum P(2) = 6.7e-43
Identities = 55/75 (73%), Positives = 69/75 (92%)
Query: 11 DSLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIEEHVGTKTAVQIRSHAQKF 70
+++ KVRKPYT+TKQREKW+EEEH RFL+A+K+YGRGWRQI+EH+GTKTAVQIRSHAQKF
Sbjct: 61 ENVVKVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKF 120
Query: 71 FSKVVRESNGSSESS 85
FSK+ +E++ SE S
Sbjct: 121 FSKMAQEADSRSEGS 135
Score = 154 (59.3 bits), Expect = 6.7e-43, Sum P(2) = 6.7e-43
Identities = 48/161 (29%), Positives = 84/161 (52%)
Query: 128 NALVSDKDRQSPTSVVSAFNSDTLGCAASDQQNGCSSPTSCTTEMHSVNLLPIEKENEYV 187
N +K +SPTSV+S+F S+ DQ N CSSP SCT+++ S+ I+K+N Y
Sbjct: 169 NLSAMEKGTKSPTSVLSSFGSE-------DQVNRCSSPNSCTSDIQSIGATSIDKKNNYT 221
Query: 188 TSIS-FPKEEKISTLPAHLSASSNVEELASVSKDSVYPKG---DAAAAPSCTSIKLFGRT 243
TS F + I + P +S+ + ++ V+++S P D +C G
Sbjct: 222 TSKQPFKDDSDIGSTP--ISSITLFGKIVLVAEESHKPSSYNDDDLKQMTCQENHYSGML 279
Query: 244 VLVSDS---WKPYSLGADSYKSPISKSSQENLDVDKKILSS 281
V + S W+ + G++++ S ++++S ENL+ + +SS
Sbjct: 280 VDTNLSLGVWETFCTGSNAFGS-VTEAS-ENLEKSAEPISS 318
Score = 46 (21.3 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 109 VDSLKATSVSNQQENFTSSNALVSDKDRQS-PTSVVSAFNSDTL 151
+ S+ ATS+ + TS D D S P S ++ F L
Sbjct: 206 IQSIGATSIDKKNNYTTSKQPFKDDSDIGSTPISSITLFGKIVL 249
>TAIR|locus:2169135 [details] [associations]
symbol:RVE2 "REVEILLE 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0007623
"circadian rhythm" evidence=IEP;RCA] [GO:0009845 "seed germination"
evidence=IMP] [GO:0009909 "regulation of flower development"
evidence=IMP] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0009737 EMBL:CP002688 GO:GO:0009733
GO:GO:0009753 GO:GO:0009723 GO:GO:0003677 GO:GO:0007623
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0009845
GO:GO:0009909 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 IPI:IPI00528444
RefSeq:NP_198542.1 UniGene:At.30502 UniGene:At.68589
ProteinModelPortal:F4K5X6 SMR:F4K5X6 PRIDE:F4K5X6
EnsemblPlants:AT5G37260.1 GeneID:833700 KEGG:ath:AT5G37260
OMA:SSHTEES ArrayExpress:F4K5X6 Uniprot:F4K5X6
Length = 287
Score = 303 (111.7 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 58/83 (69%), Positives = 68/83 (81%)
Query: 2 SNSLYSFENDSLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIEEHVGTKTAV 61
S+ L S + K RKPYTITKQREKWTE EH++F++ALK+YGR WR+IEEHVGTKTAV
Sbjct: 12 SDELISSSDAFYLKTRKPYTITKQREKWTEAEHEKFVEALKLYGRAWRRIEEHVGTKTAV 71
Query: 62 QIRSHAQKFFSKVVRESNGSSES 84
QIRSHAQKFF+KV R+ SSES
Sbjct: 72 QIRSHAQKFFTKVARDFGVSSES 94
Score = 94 (38.1 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 126 SSNALVSDKDRQSPTSVVSAFNSDTLGCAASDQQNGCSSPTSCTTEMHSVNL 177
+ + L+ D+D +SPTSV+SA SD LG S+ N S+ S TE S++L
Sbjct: 128 TGSKLIQDEDNRSPTSVLSAHGSDGLGSIGSNSPNSSSAELSSHTE-ESLSL 178
Score = 56 (24.8 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 19/69 (27%), Positives = 41/69 (59%)
Query: 181 EKENEYVTSI-SFPKEEKISTLPAHLSASSNVEELASVSKDSVYPKGDAAAAPSCTSIKL 239
+++N TS+ S + + ++ ++ S +S+ EL+S +++S+ + A + S+KL
Sbjct: 135 DEDNRSPTSVLSAHGSDGLGSIGSN-SPNSSSAELSSHTEESL-----SLEAETKQSLKL 188
Query: 240 FGRTVLVSD 248
FG+T +V D
Sbjct: 189 FGKTFVVGD 197
>TAIR|locus:2167210 [details] [associations]
symbol:RVE1 "REVEILLE 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IMP] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0007623 "circadian rhythm" evidence=IEP;RCA] [GO:0009734 "auxin
mediated signaling pathway" evidence=IMP] [GO:0009851 "auxin
biosynthetic process" evidence=IMP] [GO:0010600 "regulation of
auxin biosynthetic process" evidence=IMP] [GO:0009651 "response to
salt stress" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009739 "response to gibberellin stimulus"
evidence=RCA] [GO:0009751 "response to salicylic acid stimulus"
evidence=RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 EMBL:CP002688 GO:GO:0009734 GO:GO:0003677
GO:GO:0007623 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009851 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 GO:GO:0010600 IPI:IPI00524365
RefSeq:NP_568344.2 UniGene:At.21718 ProteinModelPortal:F4KGY6
SMR:F4KGY6 EnsemblPlants:AT5G17300.1 GeneID:831595
KEGG:ath:AT5G17300 OMA:TKERERW Uniprot:F4KGY6
Length = 387
Score = 319 (117.4 bits), Expect = 5.0e-35, Sum P(2) = 5.0e-35
Identities = 57/76 (75%), Positives = 68/76 (89%)
Query: 10 NDSLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIEEHVGTKTAVQIRSHAQK 69
ND PKVRKPYTITK+RE+WT+EEH++F++ALK+YGR WR+IEEHVG+KTAVQIRSHAQK
Sbjct: 39 NDYAPKVRKPYTITKERERWTDEEHKKFVEALKLYGRAWRRIEEHVGSKTAVQIRSHAQK 98
Query: 70 FFSKVVRESNGSSESS 85
FFSKV RE+ G SS
Sbjct: 99 FFSKVAREATGGDGSS 114
Score = 76 (31.8 bits), Expect = 5.0e-35, Sum P(2) = 5.0e-35
Identities = 42/150 (28%), Positives = 63/150 (42%)
Query: 125 TSSNALVSDKDRQSPTSVVSAFNSDTLGCAASDQQNGCSSPTSCTTEMHSVNLLP-IEKE 183
TS + S++D QSPTSV+S S+ L S N SP S + ++ +E
Sbjct: 144 TSRSVSPSERDTQSPTSVLSTVGSEALCSLDSSSPNRSLSPVSSASPPAALTTTANAPEE 203
Query: 184 NEYVTSISFPKEEKISTLPAHLSASSNVEELASVSKDSVYPKGDAAAAPSCTSIKLFGRT 243
E + FP E L+ S+++E S ++ K + S S L T
Sbjct: 204 LETLKLELFPSERL-------LNRESSIKEPTKQSL-KLFGK-TVLVSDSGMSSSLTTST 254
Query: 244 VLVSDSWKPYSLGADSYKS-PISKSSQENL 272
S +P S K+ PI ++SQE L
Sbjct: 255 YCKSPI-QPLPRKLSSSKTLPIIRNSQEEL 283
>TAIR|locus:504955668 [details] [associations]
symbol:AT3G10113 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002686 GO:GO:0006355 GO:GO:0003677 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
UniGene:At.27131 IPI:IPI00534114 RefSeq:NP_683543.1
UniGene:At.53244 ProteinModelPortal:F4J2J6 SMR:F4J2J6
EnsemblPlants:AT3G10113.1 GeneID:820173 KEGG:ath:AT3G10113
PhylomeDB:F4J2J6 Uniprot:F4J2J6
Length = 336
Score = 316 (116.3 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
Identities = 55/75 (73%), Positives = 69/75 (92%)
Query: 11 DSLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIEEHVGTKTAVQIRSHAQKF 70
+++ KVRKPYT+TKQREKW+EEEH RFL+A+K+YGRGWRQI+EH+GTKTAVQIRSHAQKF
Sbjct: 50 ENVVKVRKPYTVTKQREKWSEEEHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKF 109
Query: 71 FSKVVRESNGSSESS 85
FSK+ +E++ SE S
Sbjct: 110 FSKMAQEADSRSEGS 124
Score = 51 (23.0 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
Identities = 32/146 (21%), Positives = 61/146 (41%)
Query: 128 NALVSDKDRQSPTSVVSAFNSDTLGCAASDQQNGCSSPTSCTTEMHSVNLLP----IEKE 183
N +K +SPTSV+S+F S+ + +Q +T + S+ L + +E
Sbjct: 158 NLSAMEKGTKSPTSVLSSFGSEDQNNYTTSKQPFKDDSDIGSTPISSITLFGKIVLVAEE 217
Query: 184 NEYVTSISFPKEEKISTLPAHLSASSNVEELASVSKDSVYPKG-DAAAAPSCTSIKLFGR 242
+ +S + ++++ H S V+ S+ + G +A + + S L
Sbjct: 218 SHKPSSYNDDDLKQMTCQENHYSGML-VDTNLSLGVWETFCTGSNAFGSVTEASENLEKS 276
Query: 243 TVLVSDSWKPYS-LGADSYKSPISKS 267
+S SWK S L +P++ S
Sbjct: 277 AEPISSSWKRLSSLEKQGSCNPVNAS 302
>TAIR|locus:2200970 [details] [associations]
symbol:LHY "LATE ELONGATED HYPOCOTYL" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA;TAS] [GO:0009651 "response to salt stress"
evidence=IEP;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IEP;RCA] [GO:0009733 "response to auxin stimulus"
evidence=IEP;RCA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP;RCA] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP;RCA] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP;RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP;RCA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0048574 "long-day photoperiodism, flowering"
evidence=IGI;RCA] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA;IMP] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0007623 "circadian rhythm"
evidence=IGI;RCA] [GO:0009409 "response to cold" evidence=IGI]
[GO:0042754 "negative regulation of circadian rhythm" evidence=IMP]
[GO:0009639 "response to red or far red light" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0046686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0007623 GO:GO:0009651 GO:GO:0009409 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0044212 GO:GO:0009739 GO:GO:0043433
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 GO:GO:0048574 HOGENOM:HOG000084594 GO:GO:0042754
EMBL:AC007323 EMBL:AJ006404 EMBL:AY519507 EMBL:AK316728
EMBL:AK316829 IPI:IPI00517620 RefSeq:NP_001030924.1
RefSeq:NP_171614.1 RefSeq:NP_849568.1 UniGene:At.25466
ProteinModelPortal:Q6R0H1 SMR:Q6R0H1 IntAct:Q6R0H1 STRING:Q6R0H1
PRIDE:Q6R0H1 EnsemblPlants:AT1G01060.1 EnsemblPlants:AT1G01060.2
EnsemblPlants:AT1G01060.3 GeneID:839341 KEGG:ath:AT1G01060
GeneFarm:1653 TAIR:At1g01060 eggNOG:NOG269073 InParanoid:Q6R0H1
KO:K12133 OMA:QKFFTKL PhylomeDB:Q6R0H1 ProtClustDB:CLSN2682827
Uniprot:Q6R0H1
Length = 645
Score = 285 (105.4 bits), Expect = 7.8e-26, Sum P(2) = 7.8e-26
Identities = 49/66 (74%), Positives = 62/66 (93%)
Query: 13 LPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIEEHVGTKTAVQIRSHAQKFFS 72
L K RKPYTITKQRE+WTE+EH+RFL+AL++YGR W++IEEH+GTKTAVQIRSHAQKFF+
Sbjct: 11 LAKARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQIRSHAQKFFT 70
Query: 73 KVVRES 78
K+ +E+
Sbjct: 71 KLEKEA 76
Score = 39 (18.8 bits), Expect = 7.8e-26, Sum P(2) = 7.8e-26
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 116 SVSNQQENFTSSNALVSDKDRQSPTSVVSAFNSDTLG 152
+V N Q F N + D++ S + S+ +SD G
Sbjct: 393 TVENTQP-FEKQNTALQDQNLASKSPASSSDDSDETG 428
Score = 38 (18.4 bits), Expect = 9.9e-26, Sum P(2) = 9.9e-26
Identities = 19/84 (22%), Positives = 35/84 (41%)
Query: 122 ENFTSSNALVSDKDRQSPTSVVSAFNSDTLGCAASDQQN------G-CSSPTSCTTEMHS 174
++F+ + +QS TS+ A N + A+DQ+ G C S + T
Sbjct: 550 QSFSPPQVAENVNRKQSDTSMPLAPNFKSQDSCAADQEGVVMIGVGTCKSLKTRQTGFKP 609
Query: 175 VNLLPIEKENEYVTSISFPKEEKI 198
+E + V +I+ +EK+
Sbjct: 610 YKRCSMEVKESQVGNINNQSDEKV 633
>TAIR|locus:2044345 [details] [associations]
symbol:CCA1 "circadian clock associated 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0010243 "response to
organic nitrogen" evidence=IEP] [GO:0048574 "long-day
photoperiodism, flowering" evidence=IGI;RCA] [GO:0007623 "circadian
rhythm" evidence=IEP;IGI;RCA;IMP;TAS] [GO:0019904 "protein domain
specific binding" evidence=ISS] [GO:0043496 "regulation of protein
homodimerization activity" evidence=IMP] [GO:0009409 "response to
cold" evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042754 "negative regulation of circadian rhythm"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009639 "response to red or far
red light" evidence=RCA] [GO:0010264 "myo-inositol hexakisphosphate
biosynthetic process" evidence=RCA] [GO:0042752 "regulation of
circadian rhythm" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0009737
GO:GO:0005634 GO:GO:0046686 GO:GO:0045892 GO:GO:0045893
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733 GO:GO:0009753
GO:GO:0009723 GO:GO:0007623 GO:GO:0009651 GO:GO:0009409
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
GO:GO:0010243 GO:GO:0043496 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC005310 GO:GO:0048574
EMBL:U28422 EMBL:U79156 EMBL:AY519511 EMBL:BT001096 EMBL:BT001105
IPI:IPI00522826 IPI:IPI00545715 PIR:T02684 RefSeq:NP_850460.1
RefSeq:NP_850461.1 UniGene:At.10956 ProteinModelPortal:P92973
SMR:P92973 IntAct:P92973 STRING:P92973 PRIDE:P92973
EnsemblPlants:AT2G46830.1 GeneID:819296 KEGG:ath:AT2G46830
GeneFarm:1652 TAIR:At2g46830 eggNOG:NOG310744 HOGENOM:HOG000084594
InParanoid:P92973 KO:K12134 OMA:HPEMANE PhylomeDB:P92973
ProtClustDB:CLSN2918288 GO:GO:0042754 Uniprot:P92973
Length = 608
Score = 284 (105.0 bits), Expect = 4.0e-24, P = 4.0e-24
Identities = 51/68 (75%), Positives = 61/68 (89%)
Query: 11 DSLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIEEHVGTKTAVQIRSHAQKF 70
D + K RKPYTITKQRE+WTEEEH RF++AL++YGR W++IEEHV TKTAVQIRSHAQKF
Sbjct: 9 DLVIKTRKPYTITKQRERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQIRSHAQKF 68
Query: 71 FSKVVRES 78
FSKV +E+
Sbjct: 69 FSKVEKEA 76
>TAIR|locus:2151251 [details] [associations]
symbol:LCL1 "LHY/CCA1-like 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0007623 "circadian
rhythm" evidence=IMP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0009737 GO:GO:0005634 EMBL:CP002688
GO:GO:0046686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0007623 GO:GO:0009651 GO:GO:0003700
GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009739 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237512
EMBL:AY519514 EMBL:AJ937209 IPI:IPI00528959 RefSeq:NP_568108.1
RefSeq:NP_850756.1 UniGene:At.20108 ProteinModelPortal:Q6R0G4
SMR:Q6R0G4 STRING:Q6R0G4 EnsemblPlants:AT5G02840.1
EnsemblPlants:AT5G02840.2 GeneID:831766 KEGG:ath:AT5G02840
TAIR:At5g02840 eggNOG:NOG319149 InParanoid:Q6R0G4 OMA:AYTITKS
PhylomeDB:Q6R0G4 ProtClustDB:CLSN2689417 Genevestigator:Q6R0G4
Uniprot:Q6R0G4
Length = 293
Score = 225 (84.3 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 41/67 (61%), Positives = 54/67 (80%)
Query: 15 KVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIEEHVGTKTAVQIRSHAQKFFSKV 74
KVRK YTITK RE WTE EH +FL+AL+++ R W++IE+ VG+KT +QIRSHAQK+F KV
Sbjct: 37 KVRKAYTITKSRESWTEGEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKV 96
Query: 75 VRESNGS 81
+ NG+
Sbjct: 97 --QKNGT 101
Score = 49 (22.3 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 18/79 (22%), Positives = 34/79 (43%)
Query: 189 SISFPKEEKISTLPAHLSASSNVEELASVSKDSVYPKGDAAAAPSCTSIKLFGRTVLVSD 248
S+SFP + I+ LP + + L +++ V P D + + G ++S+
Sbjct: 133 SMSFPTQ--INNLPGYTPWDDDTSALLNIAVSGVIPPEDELDTLCGAEVDV-GSNDMISE 189
Query: 249 SWKPYSLGADSYKSPISKS 267
+ P + G S +S S
Sbjct: 190 T-SPSASGIGSSSRTLSDS 207
>TAIR|locus:2025411 [details] [associations]
symbol:ASG4 "ALTERED SEED GERMINATION 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0009651 "response to salt stress" evidence=IEP]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:Y12776
EMBL:AC061957 GO:GO:0003677 GO:GO:0009651 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:AY519508 EMBL:AJ937211 EMBL:BT029347
IPI:IPI00536561 RefSeq:NP_171659.1 UniGene:At.49839
ProteinModelPortal:Q6R0H0 SMR:Q6R0H0 IntAct:Q6R0H0
EnsemblPlants:AT1G01520.1 GeneID:839337 KEGG:ath:AT1G01520
TAIR:At1g01520 eggNOG:KOG0724 HOGENOM:HOG000237512
InParanoid:Q6R0H0 OMA:SHIMEQG PhylomeDB:Q6R0H0
ProtClustDB:CLSN2682863 Genevestigator:Q6R0H0 Uniprot:Q6R0H0
Length = 287
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 47/82 (57%), Positives = 60/82 (73%)
Query: 2 SNSLYSFENDSLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIEEHVGTKTAV 61
SN SF D KVRKPYTITK RE WTE+EH +FL+AL ++ R W++I+ VG+KT +
Sbjct: 37 SNRTMSFFEDPTKKVRKPYTITKSRENWTEQEHDKFLEALHLFDRDWKKIKAFVGSKTVI 96
Query: 62 QIRSHAQKFFSKVVRESNGSSE 83
QIRSHAQK+F KV + NG+ E
Sbjct: 97 QIRSHAQKYFLKV--QKNGTKE 116
>TAIR|locus:2075049 [details] [associations]
symbol:RVE8 "REVEILLE 8" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0032922 "circadian
regulation of gene expression" evidence=IMP] [GO:0043966 "histone
H3 acetylation" evidence=IMP] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 GO:GO:0009737 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0003700 GO:GO:0003682
GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
GO:GO:0032922 GO:GO:0048573 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237512
GO:GO:0043966 ProtClustDB:CLSN2689417 EMBL:AY091106 EMBL:AY122969
IPI:IPI00517009 RefSeq:NP_187571.2 UniGene:At.40072
ProteinModelPortal:Q8RWU3 SMR:Q8RWU3 STRING:Q8RWU3 PRIDE:Q8RWU3
EnsemblPlants:AT3G09600.1 GeneID:820117 KEGG:ath:AT3G09600
TAIR:At3g09600 InParanoid:Q8RWU3 OMA:RVISPQH PhylomeDB:Q8RWU3
Genevestigator:Q8RWU3 Uniprot:Q8RWU3
Length = 298
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 44/70 (62%), Positives = 57/70 (81%)
Query: 12 SLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIEEHVGTKTAVQIRSHAQKFF 71
S KVRKPYTITK RE WTEEEH +FL+AL+++ R W++IE+ VG+KT +QIRSHAQK+F
Sbjct: 29 SSKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYF 88
Query: 72 SKVVRESNGS 81
KV + NG+
Sbjct: 89 LKV--QKNGT 96
>TAIR|locus:2124928 [details] [associations]
symbol:AT4G01280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0009723
"response to ethylene stimulus" evidence=IEP;RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP;RCA] [GO:0009751
"response to salicylic acid stimulus" evidence=IEP;RCA] [GO:0009753
"response to jasmonic acid stimulus" evidence=IEP;RCA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0000303 "response
to superoxide" evidence=RCA] [GO:0009736 "cytokinin mediated
signaling pathway" evidence=RCA] [GO:0009873 "ethylene mediated
signaling pathway" evidence=RCA] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0009737 GO:GO:0046686
EMBL:CP002687 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0003700 GO:GO:0003682
GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 HOGENOM:HOG000237512 ProtClustDB:CLSN2682863
EMBL:AB493668 IPI:IPI00656826 RefSeq:NP_001031568.1
UniGene:At.44234 ProteinModelPortal:C0SVG5 SMR:C0SVG5
EnsemblPlants:AT4G01280.2 GeneID:827903 KEGG:ath:AT4G01280
TAIR:At4g01280 eggNOG:NOG272389 OMA:KSGANEH PhylomeDB:C0SVG5
Genevestigator:C0SVG5 Uniprot:C0SVG5
Length = 303
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 44/80 (55%), Positives = 59/80 (73%)
Query: 4 SLYSFENDSLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIEEHVGTKTAVQI 63
S SF D K+RKPYTI K RE WT++EH +FL+AL ++ R W++IE VG+KT VQI
Sbjct: 37 STVSFSEDPTTKIRKPYTIKKSRENWTDQEHDKFLEALHLFDRDWKKIEAFVGSKTVVQI 96
Query: 64 RSHAQKFFSKVVRESNGSSE 83
RSHAQK+F KV + +G++E
Sbjct: 97 RSHAQKYFLKV--QKSGANE 114
>TAIR|locus:2149589 [details] [associations]
symbol:AT5G52660 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0009737 "response
to abscisic acid stimulus" evidence=IEP] [GO:0009739 "response to
gibberellin stimulus" evidence=IEP] [GO:0009751 "response to
salicylic acid stimulus" evidence=IEP] [GO:0009753 "response to
jasmonic acid stimulus" evidence=IEP] [GO:0046686 "response to
cadmium ion" evidence=IEP] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0009737 EMBL:CP002688
GO:GO:0046686 GO:GO:0009753 GO:GO:0009723 GO:GO:0003677
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
HOGENOM:HOG000237512 eggNOG:NOG279643 EMBL:BT002002 EMBL:AY550303
EMBL:BT025882 IPI:IPI00536078 RefSeq:NP_568776.2 UniGene:At.29606
UniGene:At.67328 ProteinModelPortal:Q8H0W3 SMR:Q8H0W3
EnsemblPlants:AT5G52660.2 GeneID:835343 KEGG:ath:AT5G52660
TAIR:At5g52660 InParanoid:Q8H0W3 OMA:STSEPND PhylomeDB:Q8H0W3
ProtClustDB:CLSN2680521 ArrayExpress:Q8H0W3 Genevestigator:Q8H0W3
Uniprot:Q8H0W3
Length = 331
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 42/74 (56%), Positives = 55/74 (74%)
Query: 7 SFENDSLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIEEHVGTKTAVQIRSH 66
S E D K+RKPYTITK RE WTE EH +FL+AL+++ R W++IE +G+KT +QIRSH
Sbjct: 53 SSEEDLSKKIRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSH 112
Query: 67 AQKFFSKVVRESNG 80
AQK+F KV + G
Sbjct: 113 AQKYFLKVQKSGTG 126
>DICTYBASE|DDB_G0288783 [details] [associations]
symbol:mybG "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
SMART:SM00717 dictyBase:DDB_G0288783 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GenomeReviews:CM000154_GR
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294
EMBL:AAFI02000125 RefSeq:XP_636518.1 HSSP:Q5VVJ2
ProteinModelPortal:Q54IF9 PRIDE:Q54IF9 EnsemblProtists:DDB0220514
GeneID:8626803 KEGG:ddi:DDB_G0288783 eggNOG:NOG279643 OMA:NNTGERI
Uniprot:Q54IF9
Length = 423
Score = 236 (88.1 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 41/66 (62%), Positives = 54/66 (81%)
Query: 15 KVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIEEHVGTKTAVQIRSHAQKFFSKV 74
K RKPYTI+KQRE WT+EEHQ+FL+AL ++ R W++IE VG+KT +QIRSHAQK+F KV
Sbjct: 30 KSRKPYTISKQRENWTDEEHQKFLEALTLFDRDWKKIESFVGSKTVIQIRSHAQKYFIKV 89
Query: 75 VRESNG 80
+ + G
Sbjct: 90 QKNNTG 95
>DICTYBASE|DDB_G0274463 [details] [associations]
symbol:mybJ "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
dictyBase:DDB_G0274463 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GenomeReviews:CM000151_GR GO:GO:0006351 GO:GO:0003682
EMBL:AAFI02000012 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 RefSeq:XP_644160.1 ProteinModelPortal:Q869R9
EnsemblProtists:DDB0220506 GeneID:8619589 KEGG:ddi:DDB_G0274463
eggNOG:NOG264937 OMA:KGAWKEI Uniprot:Q869R9
Length = 734
Score = 153 (58.9 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 43/162 (26%), Positives = 72/162 (44%)
Query: 23 TKQREKWTEEEHQRFLDALKMYGRG-WRQIEEHVGTKTAVQIRSHAQKFFSKVVRESNG- 80
T ++ WT+EEH RFL+ ++++G+G W++I + VGT+T QI+SHAQK++ + +E+
Sbjct: 373 TSLKQGWTKEEHIRFLNGIQIHGKGAWKEIAQFVGTRTPTQIQSHAQKYYLRQKQETKNK 432
Query: 81 -SSESSXXXXXXXXXXXXXXXXXXXXXXSVDSLKAT----------SVSNQQENFTSSNA 129
S D K T S +E T
Sbjct: 433 RSIHDLSLQDLIDDNLNNSNKNNVDKNKQDDKEKKTQKTKKTKSKSSTKGDEEMITQQQQ 492
Query: 130 LVSDKDRQ----SPTSVVSAFNSDTLGCAASDQQNGCSSPTS 167
L +Q P ++++ FN+ +S + N SSP+S
Sbjct: 493 LQQQPQQQPQQKQPPTIITNFNTTPTSSQSSPKSNSPSSPSS 534
Score = 41 (19.5 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 9/33 (27%), Positives = 20/33 (60%)
Query: 4 SLYSFENDSLPKVRKPYTITKQREKWTEEEHQR 36
+L SF+N L + +K +Q+++ +E+ Q+
Sbjct: 115 ALLSFQNSYLQQQQKDQQQKEQQKEQQKEQQQQ 147
>TAIR|locus:2042872 [details] [associations]
symbol:AT2G38090 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002685 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT006122 EMBL:AY519529
EMBL:AK118135 IPI:IPI00542058 RefSeq:NP_181344.2 UniGene:At.46819
ProteinModelPortal:Q8GXN7 SMR:Q8GXN7 EnsemblPlants:AT2G38090.1
GeneID:818387 KEGG:ath:AT2G38090 TAIR:At2g38090
HOGENOM:HOG000237920 InParanoid:Q8GXN7 OMA:HRQFLMG PhylomeDB:Q8GXN7
ProtClustDB:CLSN2918198 Genevestigator:Q8GXN7 Uniprot:Q8GXN7
Length = 298
Score = 145 (56.1 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 32/68 (47%), Positives = 44/68 (64%)
Query: 21 TITKQREK---WTEEEHQRFLDALKMYGRG-WRQIEEH-VGTKTAVQIRSHAQKFFSKVV 75
T +R+K WTEEEH++FL LK YG+G WR I + V T+T Q+ SHAQK+F +
Sbjct: 132 TAEHERKKGVPWTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYF---I 188
Query: 76 RESNGSSE 83
R+ NG +
Sbjct: 189 RQVNGGKD 196
>TAIR|locus:2150149 [details] [associations]
symbol:AT5G01200 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL137189
HOGENOM:HOG000237920 EMBL:AY519530 IPI:IPI00517812 PIR:T45960
RefSeq:NP_195740.1 UniGene:At.27639 ProteinModelPortal:Q9LFB6
SMR:Q9LFB6 EnsemblPlants:AT5G01200.1 GeneID:831676
KEGG:ath:AT5G01200 TAIR:At5g01200 eggNOG:NOG260690
InParanoid:Q9LFB6 OMA:SAANSDY PhylomeDB:Q9LFB6
ProtClustDB:CLSN2916637 ArrayExpress:Q9LFB6 Genevestigator:Q9LFB6
Uniprot:Q9LFB6
Length = 267
Score = 143 (55.4 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 31/67 (46%), Positives = 42/67 (62%)
Query: 24 KQREK---WTEEEHQRFLDALKMYGRG-WRQI-EEHVGTKTAVQIRSHAQKFFSKVVRES 78
K+R+K WTE+EH RFL LK YG+G WR I + V T+T Q+ SHAQK+F + + +
Sbjct: 140 KERKKGVPWTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKYFLRQLTDG 199
Query: 79 NGSSESS 85
SS
Sbjct: 200 KDKRRSS 206
>TAIR|locus:2171519 [details] [associations]
symbol:AT5G47390 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
InterPro:IPR001005 InterPro:IPR001878 InterPro:IPR009057
Pfam:PF00249 PROSITE:PS50158 SMART:SM00343 SMART:SM00717
GO:GO:0009737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046686
GO:GO:0009753 GO:GO:0009723 GO:GO:0003677 GO:GO:0009651
GO:GO:0008270 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB018117
HOGENOM:HOG000237594 EMBL:AY072077 EMBL:AY096661 EMBL:AY084295
EMBL:AY519516 EMBL:AK226931 IPI:IPI00516324 RefSeq:NP_199550.1
UniGene:At.23392 ProteinModelPortal:Q9LVS0 SMR:Q9LVS0 STRING:Q9LVS0
PaxDb:Q9LVS0 PRIDE:Q9LVS0 EnsemblPlants:AT5G47390.1 GeneID:834786
KEGG:ath:AT5G47390 TAIR:At5g47390 eggNOG:NOG267183
InParanoid:Q9LVS0 OMA:SSRQSAF PhylomeDB:Q9LVS0
ProtClustDB:CLSN2686371 ArrayExpress:Q9LVS0 Genevestigator:Q9LVS0
Uniprot:Q9LVS0
Length = 365
Score = 130 (50.8 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 23 TKQREK---WTEEEHQRFLDALKMYGRG-WRQIEE-HVGTKTAVQIRSHAQKFFSKVVRE 77
+++R+K WTEEEH+ FL L+ G+G WR I +V T+T Q+ SHAQK+F +R+
Sbjct: 89 SRERKKGTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYF---IRQ 145
Query: 78 SNGS 81
SN S
Sbjct: 146 SNVS 149
Score = 51 (23.0 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 22/77 (28%), Positives = 34/77 (44%)
Query: 193 PKEEKISTL--PA--HLSASSNVEELASVSKDSVYPKGDAAAAPSCTSIKLFGRTVLVSD 248
PK+E+ + P H A NV+EL +SK S+ + S+KL G +
Sbjct: 286 PKKEETHEILRPTAVHSKAPINVDELLGMSKLSLAESNKHGESDQSLSLKLGGGSSSRQS 345
Query: 249 SWKPY-SLGADSYKSPI 264
++ P S + KS I
Sbjct: 346 AFHPNPSSDSSDIKSVI 362
>TAIR|locus:2154508 [details] [associations]
symbol:AT5G58900 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB016885
HOGENOM:HOG000237920 EMBL:BT005473 EMBL:AY519533 EMBL:AK118891
IPI:IPI00547099 RefSeq:NP_200698.1 UniGene:At.7757
ProteinModelPortal:Q9FIL9 SMR:Q9FIL9 DNASU:836007
EnsemblPlants:AT5G58900.1 GeneID:836007 KEGG:ath:AT5G58900
TAIR:At5g58900 eggNOG:NOG325121 InParanoid:Q9FIL9 OMA:PFTLDWA
PhylomeDB:Q9FIL9 ProtClustDB:CLSN2914846 ArrayExpress:Q9FIL9
Genevestigator:Q9FIL9 Uniprot:Q9FIL9
Length = 288
Score = 140 (54.3 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 31/69 (44%), Positives = 42/69 (60%)
Query: 17 RKPYTITKQREKWTEEEHQRFLDALKMYGRG-WRQIEEH-VGTKTAVQIRSHAQKFFSKV 74
R P K+ WTEEEH+ FL LK YG+G WR I + V T+T Q+ SHAQK+F
Sbjct: 131 RSPELERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYF--- 187
Query: 75 VRESNGSSE 83
+R+ +G +
Sbjct: 188 IRQLSGGKD 196
>DICTYBASE|DDB_G0289151 [details] [associations]
symbol:mybI "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
dictyBase:DDB_G0289151 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 GenomeReviews:CM000154_GR
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
PROSITE:PS51294 EMBL:AAFI02000130 RefSeq:XP_636387.1
ProteinModelPortal:Q54HX6 EnsemblProtists:DDB0233332 GeneID:8626988
KEGG:ddi:DDB_G0289151 eggNOG:NOG265212 OMA:CKLIKEN Uniprot:Q54HX6
Length = 977
Score = 147 (56.8 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 44/171 (25%), Positives = 76/171 (44%)
Query: 24 KQREKWTEEEHQRFLDALKMYG-RGWRQIEEHVGTKTAVQIRSHAQKFFSKVVRESNGSS 82
KQ WT EEH RF++AL YG + + I ++V T+ Q+R+HAQK+F ++ RE
Sbjct: 170 KQSRYWTPEEHSRFIEALSKYGHKDVKSISQYVSTRNPTQVRTHAQKYFLRIDRERGRKL 229
Query: 83 ESSXXXXXXXXXXXXXXXXXXXXXXSVDSLKATSVS---NQQENFTSSNALVSDKDRQSP 139
ES S + S S N N S++ ++S + +
Sbjct: 230 ESKESINGGADKDDDWLREEYNDEGSPTQYSSCSNSPTTNSVANPFSNSLIISSNNNNNS 289
Query: 140 TSVVSAFNSDTLGCAASDQQN-GCSSPTSCTTEMHSVNLLP-IEKENEYVT 188
S + N++ ++ N + + + ++S N P I+++ E VT
Sbjct: 290 NSSNNNNNNNNNNNNNNNNNNININGSSGSNSNVNSGNSSPLIKRKREAVT 340
>TAIR|locus:2166459 [details] [associations]
symbol:AT5G05790 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB005237
HOGENOM:HOG000237920 ProtClustDB:CLSN2684400 EMBL:AY519531
EMBL:BT026054 IPI:IPI00544524 RefSeq:NP_196198.1 UniGene:At.32952
ProteinModelPortal:Q9FFJ9 SMR:Q9FFJ9 EnsemblPlants:AT5G05790.1
GeneID:830464 KEGG:ath:AT5G05790 TAIR:At5g05790 eggNOG:NOG242423
InParanoid:Q9FFJ9 OMA:ISRNFVG PhylomeDB:Q9FFJ9 ArrayExpress:Q9FFJ9
Genevestigator:Q9FFJ9 Uniprot:Q9FFJ9
Length = 277
Score = 137 (53.3 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 29 WTEEEHQRFLDALKMYGRG-WRQIEEH-VGTKTAVQIRSHAQKFFSK 73
WTEEEH+RFL L YG+G WR I + VG+KT Q+ SHAQK++ +
Sbjct: 133 WTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQR 179
>DICTYBASE|DDB_G0277927 [details] [associations]
symbol:mybH "SWIRM domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000555
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF01398 Pfam:PF04433 PROSITE:PS50934
SMART:SM00232 SMART:SM00717 dictyBase:DDB_G0277927 GO:GO:0005634
GO:GO:0006355 GenomeReviews:CM000152_GR GO:GO:0003677
EMBL:AAFI02000023 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 eggNOG:NOG329351 HSSP:Q5VVJ2 RefSeq:XP_642011.1
ProteinModelPortal:Q54Z40 MEROPS:M67.A12 EnsemblProtists:DDB0220617
GeneID:8621224 KEGG:ddi:DDB_G0277927 KO:K11865 OMA:PIQQSPI
Uniprot:Q54Z40
Length = 1217
Score = 149 (57.5 bits), Expect = 6.4e-07, Sum P(3) = 6.4e-07
Identities = 34/80 (42%), Positives = 52/80 (65%)
Query: 2 SNSLYSFENDSLPKVRKPYTIT-KQREKWTEEEHQRFLDALKMYGRGWRQIEEHVGTKTA 60
+N+ + N++ PK TI+ R WT+EE + F++A K+Y + ++I+EHV TKT
Sbjct: 129 NNNNNNNNNNNTPKT----TISGATRSSWTKEEERLFVEAYKLYDKDNKKIQEHVKTKTI 184
Query: 61 VQIRSHAQKFFSKVVRESNG 80
+Q+RSHAQKF K+ E NG
Sbjct: 185 LQVRSHAQKFALKL--EKNG 202
Score = 39 (18.8 bits), Expect = 6.4e-07, Sum P(3) = 6.4e-07
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 257 ADSYKSPISKSSQE 270
+DSY S +S+SS +
Sbjct: 1147 SDSYMSEVSRSSSD 1160
Score = 39 (18.8 bits), Expect = 6.4e-07, Sum P(3) = 6.4e-07
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 154 AASDQQNGCSSPTSCTTEMHSVNLLPIEK 182
AAS N S T + E H + L IEK
Sbjct: 218 AASSSHNLPSHNTPWSNEEHELFLKAIEK 246
Score = 38 (18.4 bits), Expect = 8.0e-07, Sum P(3) = 8.0e-07
Identities = 14/49 (28%), Positives = 20/49 (40%)
Query: 78 SNGSSESSXXXXXXXXXXXXXXXXXXXXXXSVDSLKATSVSNQQENFTS 126
S+GSS SS S +S K++S S + +N TS
Sbjct: 368 SSGSSSSSSSSTISSGGSGGRSSGGSSGRSSGNSKKSSSKS-KSKNPTS 415
>UNIPROTKB|Q8S9H7 [details] [associations]
symbol:DIVARICATA "Transcription factor DIVARICATA"
species:4151 "Antirrhinum majus" [GO:0009908 "flower development"
evidence=IMP] [GO:0048262 "determination of dorsal/ventral
asymmetry" evidence=IMP] InterPro:IPR001005 InterPro:IPR009057
Pfam:PF00249 SMART:SM00717 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0009908
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 GO:GO:0048262 EMBL:AY077453
ProteinModelPortal:Q8S9H7 Uniprot:Q8S9H7
Length = 307
Score = 136 (52.9 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 39/127 (30%), Positives = 58/127 (45%)
Query: 24 KQREKWTEEEHQRFLDALKMYGRG-WRQIEEH-VGTKTAVQIRSHAQKFFSKVVRESNGS 81
K+ WTEEEH+ FL LK YG+G WR I + V T+T Q+ SHAQK+F + + S G
Sbjct: 129 KKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQL--SGGK 186
Query: 82 SESSXXXXXXXXXXXXXXXXXXXXXXSVDSLKATSVSNQQENFTSSNALVSDKDRQSPTS 141
+ S S++ QQ + TS + L D+ S +
Sbjct: 187 DKRRASIHDITTVNLSDNQTPSPDNKKPPSSPDHSMAQQQTSSTSIHKLPFQWDQTSNET 246
Query: 142 VVSAFNS 148
++ +S
Sbjct: 247 IMGFASS 253
>TAIR|locus:2175478 [details] [associations]
symbol:AT5G04760 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010286 "heat acclimation" evidence=RCA] InterPro:IPR001005
InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL162972
EMBL:AB008271 UniGene:At.20111 UniGene:At.68528
HOGENOM:HOG000237920 EMBL:AY050976 EMBL:AY091177 EMBL:AY088362
EMBL:AB493736 IPI:IPI00530948 PIR:T48472 RefSeq:NP_196096.1
ProteinModelPortal:Q9LZ21 SMR:Q9LZ21 IntAct:Q9LZ21
EnsemblPlants:AT5G04760.1 GeneID:830354 KEGG:ath:AT5G04760
TAIR:At5g04760 eggNOG:NOG276102 InParanoid:Q9LZ21 OMA:WRNISRW
PhylomeDB:Q9LZ21 ProtClustDB:CLSN2686445 ArrayExpress:Q9LZ21
Genevestigator:Q9LZ21 Uniprot:Q9LZ21
Length = 215
Score = 130 (50.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 30/64 (46%), Positives = 39/64 (60%)
Query: 24 KQREKWTEEEHQRFLDALKMYGRG-WRQIEEHVG-TKTAVQIRSHAQKFF---SKVVRES 78
K+ WTE EH+ FL LK YG+G WR I +V T+T Q+ SHAQK+F + V +E
Sbjct: 96 KRGTPWTENEHKLFLIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKER 155
Query: 79 NGSS 82
SS
Sbjct: 156 KRSS 159
>TAIR|locus:2171711 [details] [associations]
symbol:AT5G23650 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB025633
HOGENOM:HOG000237920 EMBL:DQ056685 IPI:IPI00534696
RefSeq:NP_197754.1 UniGene:At.54959 ProteinModelPortal:Q9LT00
SMR:Q9LT00 EnsemblPlants:AT5G23650.1 GeneID:832430
KEGG:ath:AT5G23650 TAIR:At5g23650 eggNOG:NOG311780
InParanoid:Q9LT00 OMA:HYNILAR PhylomeDB:Q9LT00
ProtClustDB:CLSN2914851 Genevestigator:Q9LT00 Uniprot:Q9LT00
Length = 337
Score = 134 (52.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 33/100 (33%), Positives = 47/100 (47%)
Query: 29 WTEEEHQRFLDALKMYGRG-WRQIEEH-VGTKTAVQIRSHAQKFFSKVVRESNGSSESSX 86
W EH++FL LK YG+G WR I H V T+T+ Q+ SHAQK+F+ + E S
Sbjct: 122 WKPFEHRQFLHGLKKYGKGDWRSISRHCVVTRTSTQVASHAQKYFAHINSEDKKRKRPSI 181
Query: 87 XXXXXXXXXXXXXXXXXXXXXSVDSLKATSVSNQQENFTS 126
+++ AT+ SN Q N T+
Sbjct: 182 HDITIAENKSISTKQRPITWQKINNNGATA-SNTQANQTT 220
>TAIR|locus:2133667 [details] [associations]
symbol:AT4G09450 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL161514
HOGENOM:HOG000237920 EMBL:AY122911 IPI:IPI00520050 PIR:C85096
RefSeq:NP_192683.1 UniGene:At.33693 ProteinModelPortal:Q9M0P7
SMR:Q9M0P7 DNASU:826528 EnsemblPlants:AT4G09450.1 GeneID:826528
KEGG:ath:AT4G09450 TAIR:At4g09450 eggNOG:NOG301281
InParanoid:Q9M0P7 OMA:EGLNKFG PhylomeDB:Q9M0P7
ProtClustDB:CLSN2684024 Genevestigator:Q9M0P7 Uniprot:Q9M0P7
Length = 200
Score = 125 (49.1 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 29 WTEEEHQRFLDALKMYGRG-WRQIEEH-VGTKTAVQIRSHAQKFFSKVVRESNGSSESS 85
W+EEE + FL+ L +G+G W+ I + V ++T+ Q+ SHAQK+F++ +ES + S
Sbjct: 93 WSEEEQRLFLEGLNKFGKGDWKNISRYCVKSRTSTQVASHAQKYFARQKQESTNTKRPS 151
>TAIR|locus:2074723 [details] [associations]
symbol:AT3G11280 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009751 "response to salicylic acid stimulus" evidence=IEP]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0019344 "cysteine biosynthetic process" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002686 GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009739 InterPro:IPR017884 PROSITE:PS51293 EMBL:AC073395
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 UniGene:At.23548 EMBL:AY056180 EMBL:AY091265
EMBL:AY550308 IPI:IPI00541857 RefSeq:NP_187737.1 RefSeq:NP_850558.1
ProteinModelPortal:Q9C773 SMR:Q9C773 STRING:Q9C773 PRIDE:Q9C773
DNASU:820299 EnsemblPlants:AT3G11280.1 EnsemblPlants:AT3G11280.2
GeneID:820299 KEGG:ath:AT3G11280 TAIR:At3g11280 InParanoid:Q9C773
OMA:FEAAINF PhylomeDB:Q9C773 ProtClustDB:CLSN2684400
ArrayExpress:Q9C773 Genevestigator:Q9C773 Uniprot:Q9C773
Length = 263
Score = 129 (50.5 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 24 KQREKWTEEEHQRFLDALKMYGRG-WRQIEEH-VGTKTAVQIRSHAQKFFSK 73
K+ WTEEEH+RFL L YG+G WR I + V +KT Q+ SHAQK++ +
Sbjct: 124 KKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKYYQR 175
>TAIR|locus:2027181 [details] [associations]
symbol:AT1G74840 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0009723
"response to ethylene stimulus" evidence=IEP] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0009751 "response to salicylic acid
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0046686
GO:GO:0009733 GO:GO:0009753 GO:GO:0009723 GO:GO:0003677
GO:GO:0009651 GO:GO:0003700 GO:GO:0003682 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC008263
EMBL:AC013258 HOGENOM:HOG000237594 ProtClustDB:CLSN2682289
EMBL:AY070098 EMBL:AY096393 EMBL:AY519510 IPI:IPI00526439
PIR:H96777 RefSeq:NP_177622.1 UniGene:At.11594
ProteinModelPortal:Q9S7N6 SMR:Q9S7N6 IntAct:Q9S7N6 STRING:Q9S7N6
EnsemblPlants:AT1G74840.1 GeneID:843823 KEGG:ath:AT1G74840
TAIR:At1g74840 InParanoid:Q9S7N6 OMA:GTRREIM PhylomeDB:Q9S7N6
ArrayExpress:Q9S7N6 Genevestigator:Q9S7N6 Uniprot:Q9S7N6
Length = 265
Score = 128 (50.1 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 6 YSFENDSLPKVRKPYTITKQRE-KWTEEEHQRFLDALKMYGRG-WRQIEEH-VGTKTAVQ 62
Y+ +++LP I ++R WTEEEH+ FL L+ G+G W+ I + V T+T+ Q
Sbjct: 74 YASADEALPMSSSNGKIERKRGVPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQ 133
Query: 63 IRSHAQKFFSKVVRESN 79
+ SHAQK+F +R SN
Sbjct: 134 VASHAQKYF---LRRSN 147
>TAIR|locus:2075775 [details] [associations]
symbol:AT3G10580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0003682 EMBL:AC011560 EMBL:AC013428 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237920
ProtClustDB:CLSN2684024 IPI:IPI00530835 RefSeq:NP_187669.1
UniGene:At.53250 ProteinModelPortal:Q9SQY8 SMR:Q9SQY8
EnsemblPlants:AT3G10580.1 GeneID:820225 KEGG:ath:AT3G10580
TAIR:At3g10580 InParanoid:Q9SQY8 OMA:NIAQFLQ PhylomeDB:Q9SQY8
Genevestigator:Q9SQY8 Uniprot:Q9SQY8
Length = 287
Score = 128 (50.1 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 9 END--SLPKVRKPYTITKQREK---WTEEEHQRFLDALKMYGRG-WRQIE-EHVGTKTAV 61
E+D SLP+ K T ++K W+ EEH+ FLD L YG+G W+ I E V +++ +
Sbjct: 72 EDDYVSLPEATKSKTQGTGKKKGIPWSPEEHRLFLDGLNKYGKGDWKSISRECVTSRSPM 131
Query: 62 QIRSHAQKFFSKVVRESN 79
Q+ SHAQK+F +R+ N
Sbjct: 132 QVASHAQKYF---LRQKN 146
>TAIR|locus:2020653 [details] [associations]
symbol:AT1G70000 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009751 "response to salicylic acid stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0080167 "response to karrikin" evidence=IEP] InterPro:IPR001005
InterPro:IPR001878 InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50158
SMART:SM00343 SMART:SM00717 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0046686 GO:GO:0009733 GO:GO:0009753
GO:GO:0009723 GO:GO:0003677 GO:GO:0009651 GO:GO:0008270
GO:GO:0003700 GO:GO:0003682 GO:GO:0080167 GO:GO:0009751
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC002062
EMBL:BT006413 EMBL:AY519509 EMBL:AK227711 IPI:IPI00529630
PIR:F96722 RefSeq:NP_001185359.1 RefSeq:NP_177158.1
UniGene:At.35354 UniGene:At.67206 ProteinModelPortal:O04544
SMR:O04544 PRIDE:O04544 EnsemblPlants:AT1G70000.1
EnsemblPlants:AT1G70000.2 GeneID:843337 KEGG:ath:AT1G70000
TAIR:At1g70000 eggNOG:NOG270059 HOGENOM:HOG000237594
InParanoid:O04544 OMA:SMNNLSQ PhylomeDB:O04544
ProtClustDB:CLSN2913574 ArrayExpress:O04544 Genevestigator:O04544
Uniprot:O04544
Length = 261
Score = 124 (48.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 24 KQREKWTEEEHQRFLDALKMYGRG-WRQIEEH-VGTKTAVQIRSHAQKFFSKVVRESNGS 81
K+ WTEEEH+ FL L G+G WR I + V T+T Q+ SHAQK+F + ++
Sbjct: 95 KRGTPWTEEEHRLFLTGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRTNQNRRR 154
Query: 82 SESS 85
SS
Sbjct: 155 RRSS 158
>TAIR|locus:2151621 [details] [associations]
symbol:AT5G61620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001005 InterPro:IPR001878
InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50158 SMART:SM00343
SMART:SM00717 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB012239 IPI:IPI00529008
RefSeq:NP_200970.1 UniGene:At.55665 ProteinModelPortal:Q9FKF9
SMR:Q9FKF9 PaxDb:Q9FKF9 PRIDE:Q9FKF9 EnsemblPlants:AT5G61620.1
GeneID:836284 KEGG:ath:AT5G61620 TAIR:At5g61620 eggNOG:NOG325297
HOGENOM:HOG000152521 InParanoid:Q9FKF9 OMA:HNGHNAR PhylomeDB:Q9FKF9
ProtClustDB:CLSN2713497 Genevestigator:Q9FKF9 Uniprot:Q9FKF9
Length = 317
Score = 125 (49.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 24 KQREKWTEEEHQRFLDALKMYGRG-WRQI-EEHVGTKTAVQIRSHAQKFFSKV 74
K+ + WTEEEH+ FL L G+G WR I + V T+T Q+ SHAQK+F ++
Sbjct: 105 KKGKPWTEEEHRNFLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFIRL 157
>TAIR|locus:2159607 [details] [associations]
symbol:AT5G08520 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB006697
HOGENOM:HOG000237920 EMBL:AY072090 EMBL:AY096571 EMBL:AY519532
IPI:IPI00516280 RefSeq:NP_196469.1 UniGene:At.8762
ProteinModelPortal:Q9FNN6 SMR:Q9FNN6 STRING:Q9FNN6 PaxDb:Q9FNN6
PRIDE:Q9FNN6 EnsemblPlants:AT5G08520.1 GeneID:830751
KEGG:ath:AT5G08520 TAIR:At5g08520 eggNOG:NOG259915
InParanoid:Q9FNN6 OMA:NSMNRER PhylomeDB:Q9FNN6
ProtClustDB:CLSN2687300 ArrayExpress:Q9FNN6 Genevestigator:Q9FNN6
Uniprot:Q9FNN6
Length = 298
Score = 122 (48.0 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 29 WTEEEHQRFLDALKMYGRG-WRQIEEH-VGTKTAVQIRSHAQKFFSKV 74
WTE+EH+ FL L YG+G WR I + V T+T Q+ SHAQK+F ++
Sbjct: 120 WTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRL 167
>TAIR|locus:2094942 [details] [associations]
symbol:AT3G16350 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0009739 "response to gibberellin stimulus"
evidence=IEP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
InterPro:IPR001005 InterPro:IPR001878 InterPro:IPR009057
Pfam:PF00249 SMART:SM00343 SMART:SM00717 GO:GO:0046686
EMBL:CP002686 GO:GO:0009733 GO:GO:0009753 GO:GO:0009723
GO:GO:0003677 GO:GO:0009651 GO:GO:0008270 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 EMBL:BT005832 IPI:IPI00535787 RefSeq:NP_188256.1
UniGene:At.47678 ProteinModelPortal:Q84TG2 SMR:Q84TG2 PRIDE:Q84TG2
EnsemblPlants:AT3G16350.1 GeneID:820882 KEGG:ath:AT3G16350
TAIR:At3g16350 InParanoid:Q84TG2 OMA:GMATRHE PhylomeDB:Q84TG2
ProtClustDB:CLSN2913348 Genevestigator:Q84TG2 Uniprot:Q84TG2
Length = 387
Score = 121 (47.7 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 24 KQREKWTEEEHQRFLDALKMYGRG-WRQIEE-HVGTKTAVQIRSHAQKFFSKVVRESNGS 81
K+ WTEEEH+ FL L+ G+G WR I +V ++T Q+ SHAQK+F + S
Sbjct: 134 KRGVPWTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPTQVASHAQKYFIRHTSSSRRK 193
Query: 82 SESS 85
SS
Sbjct: 194 RRSS 197
>TAIR|locus:2011216 [details] [associations]
symbol:AT1G19000 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AC068602
EMBL:AY045881 EMBL:AY079415 EMBL:AK316815 IPI:IPI00546856
PIR:G86323 RefSeq:NP_173334.1 RefSeq:NP_849689.1 UniGene:At.23413
ProteinModelPortal:Q9LMC7 SMR:Q9LMC7 IntAct:Q9LMC7 STRING:Q9LMC7
PRIDE:Q9LMC7 EnsemblPlants:AT1G19000.1 EnsemblPlants:AT1G19000.2
GeneID:838481 KEGG:ath:AT1G19000 TAIR:At1g19000 InParanoid:Q9LMC7
OMA:GYASAND PhylomeDB:Q9LMC7 ProtClustDB:CLSN2682289
ArrayExpress:Q9LMC7 Genevestigator:Q9LMC7 Uniprot:Q9LMC7
Length = 285
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 6 YSFENDSLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRG-WRQIEEH-VGTKTAVQI 63
Y+ ND++ ++ K+ WTE EH+RFL L+ G+G W+ I + V ++T Q+
Sbjct: 82 YASANDAV-QISSSSGGRKRGVPWTENEHKRFLIGLQKVGKGDWKGISRNFVKSRTPTQV 140
Query: 64 RSHAQKFF 71
SHAQK+F
Sbjct: 141 ASHAQKYF 148
>TAIR|locus:2028461 [details] [associations]
symbol:AT1G49010 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009651 "response
to salt stress" evidence=IEP] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0009751 "response to salicylic acid
stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
stimulus" evidence=IEP] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0016556 "mRNA modification" evidence=RCA]
InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046686
GO:GO:0009733 GO:GO:0009753 GO:GO:0003677 GO:GO:0009651
GO:GO:0003700 GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009739 EMBL:AC016041 InterPro:IPR017884
PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237920
EMBL:AY086906 EMBL:AY519528 EMBL:BT024862 IPI:IPI00544296
PIR:F96527 RefSeq:NP_564537.1 UniGene:At.38318
ProteinModelPortal:Q9M9A3 SMR:Q9M9A3 STRING:Q9M9A3 PRIDE:Q9M9A3
EnsemblPlants:AT1G49010.1 GeneID:841324 KEGG:ath:AT1G49010
TAIR:At1g49010 eggNOG:NOG253185 InParanoid:Q9M9A3 OMA:YVVPVAY
PhylomeDB:Q9M9A3 ProtClustDB:CLSN2688585 ArrayExpress:Q9M9A3
Genevestigator:Q9M9A3 Uniprot:Q9M9A3
Length = 314
Score = 116 (45.9 bits), Expect = 0.00022, P = 0.00022
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 29 WTEEEHQRFLDALKMYGRG-WRQIEEH-VGTKTAVQIRSHAQKFFSKV 74
WTEEEH+ FL L +G+G WR I + V ++T Q+ SHAQK+F ++
Sbjct: 136 WTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRL 183
>TAIR|locus:2165106 [details] [associations]
symbol:AT5G56840 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR001005 InterPro:IPR001878
InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50158 SMART:SM00343
SMART:SM00717 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB013392
HOGENOM:HOG000237594 EMBL:AY519517 EMBL:BT012528 EMBL:BT014956
IPI:IPI00548744 RefSeq:NP_200495.1 UniGene:At.29361
ProteinModelPortal:Q9FJS9 SMR:Q9FJS9 EnsemblPlants:AT5G56840.1
GeneID:835786 KEGG:ath:AT5G56840 TAIR:At5g56840 eggNOG:NOG244478
InParanoid:Q9FJS9 OMA:ESNIRPI PhylomeDB:Q9FJS9
ProtClustDB:CLSN2916792 Genevestigator:Q9FJS9 Uniprot:Q9FJS9
Length = 233
Score = 113 (44.8 bits), Expect = 0.00024, P = 0.00024
Identities = 26/54 (48%), Positives = 34/54 (62%)
Query: 23 TKQREK---WTEEEHQRFLDALKMYGRG-WRQIEEH-VGTKTAVQIRSHAQKFF 71
T R+K WT EEH+ FL L+ G+G WR I + V TK+ Q+ SHAQK+F
Sbjct: 84 TPDRKKGVPWTAEEHRTFLIGLEKLGKGDWRGISRNFVVTKSPTQVASHAQKYF 137
>UNIPROTKB|J9P785 [details] [associations]
symbol:MYSM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 PROSITE:PS50934 SMART:SM00717
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
GeneTree:ENSGT00530000063766 EMBL:AAEX03003792
Ensembl:ENSCAFT00000045716 Uniprot:J9P785
Length = 358
Score = 112 (44.5 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 22/78 (28%), Positives = 41/78 (52%)
Query: 9 ENDS--LPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIEEHVGTKTAVQIRSH 66
E+D + + P KWT EE + F L +GR W +I + +G++T +Q++S+
Sbjct: 57 EDDKKYMKRAHSPTKSASYSVKWTIEEKELFEQGLAKFGRRWTKIAKLIGSRTVLQVKSY 116
Query: 67 AQKFFSKVVRESNGSSES 84
A+++F V+ E+
Sbjct: 117 ARQYFKNKVKLDGPEKET 134
Score = 40 (19.1 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 6/35 (17%), Positives = 19/35 (54%)
Query: 253 YSLGADSYKSPISKSSQENLDVDKKILSSQPHQSI 287
Y + +S++ K ++ +++D+ + + Q+I
Sbjct: 309 YQMEDESHEEEELKPPEQEVEIDRNTIQEEEKQAI 343
>UNIPROTKB|Q5F3F2 [details] [associations]
symbol:MYSM1 "Histone H2A deubiquitinase MYSM1"
species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0016578 "histone deubiquitination"
evidence=ISS] [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0004843 "ubiquitin-specific protease activity" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR000555 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398
Pfam:PF04433 PROSITE:PS50934 SMART:SM00232 SMART:SM00717
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0006508
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008237 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003713
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393 GO:GO:0016585
GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 eggNOG:NOG329351
KO:K11865 EMBL:AJ851698 IPI:IPI00820738 RefSeq:NP_001012945.1
UniGene:Gga.6922 ProteinModelPortal:Q5F3F2 SMR:Q5F3F2
MEROPS:M67.005 GeneID:424671 KEGG:gga:424671 CTD:114803
HOGENOM:HOG000113713 HOVERGEN:HBG079486 InParanoid:Q5F3F2
OrthoDB:EOG4ZGPBQ NextBio:20826977 Uniprot:Q5F3F2
Length = 832
Score = 118 (46.6 bits), Expect = 0.00058, P = 0.00058
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 16 VRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIEEHVGTKTAVQIRSHAQKFFSKVV 75
VR P KWT EE + F L YGR W +I + +G++T +Q++S+A+++F
Sbjct: 109 VRSPTKPGSYSLKWTSEEKELFEQGLVKYGRRWTKIAKLIGSRTVLQVKSYARQYFKN-- 166
Query: 76 RESNGSSE 83
+ N SE
Sbjct: 167 KAKNDGSE 174
>ZFIN|ZDB-GENE-041014-28 [details] [associations]
symbol:mysm1 "Myb-like, SWIRM and MPN domains 1"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0016578 "histone
deubiquitination" evidence=ISS] [GO:0004843 "ubiquitin-specific
protease activity" evidence=ISS] [GO:0008237 "metallopeptidase
activity" evidence=IEA;ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
InterPro:IPR000555 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398 Pfam:PF04433
PROSITE:PS50934 SMART:SM00232 SMART:SM00717 ZFIN:ZDB-GENE-041014-28
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0006508
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008237 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003713
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393 GO:GO:0016585
GO:GO:0016578 GO:GO:0004843 GO:GO:0004221
GeneTree:ENSGT00530000063766 HSSP:Q5VVJ2 KO:K11865 eggNOG:COG5259
CTD:114803 HOGENOM:HOG000113713 OrthoDB:EOG4ZGPBQ EMBL:BX942841
EMBL:BC134239 IPI:IPI00494402 RefSeq:NP_001157501.1
UniGene:Dr.86682 Ensembl:ENSDART00000044655 GeneID:561225
KEGG:dre:561225 InParanoid:A3KPA5 NextBio:20883824 Bgee:Q5RGA4
Uniprot:Q5RGA4
Length = 822
Score = 120 (47.3 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 21/58 (36%), Positives = 38/58 (65%)
Query: 15 KVRKPYTITKQRE-KWTEEEHQRFLDALKMYGRGWRQIEEHVGTKTAVQIRSHAQKFF 71
KV+KP + + +W EEE + F L +GR W +I + +GT+T +Q++S+A+++F
Sbjct: 87 KVKKPLVKSSAAQTRWAEEEKELFEKGLAQFGRRWTKIAKLIGTRTVLQVKSYAKQYF 144
Score = 38 (18.4 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 198 ISTLPAHLSASSNVEELASVSKD 220
+S++ H+SA +N + +S D
Sbjct: 164 VSSIQPHVSALTNAVRIERLSDD 186
>TAIR|locus:504955890 [details] [associations]
symbol:AT3G10595 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003682
EMBL:AC013428 SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
HOGENOM:HOG000237920 EMBL:BT015072 EMBL:BT015666 IPI:IPI00517930
RefSeq:NP_683547.2 UniGene:At.49612 ProteinModelPortal:Q9LPN9
SMR:Q9LPN9 EnsemblPlants:AT3G10595.1 GeneID:820228
KEGG:ath:AT3G10595 TAIR:At3g10595 eggNOG:NOG296411
InParanoid:Q9LPN9 OMA:KETHEWF PhylomeDB:Q9LPN9
ProtClustDB:CLSN2915149 Genevestigator:Q9LPN9 Uniprot:Q9LPN9
Length = 183
Score = 105 (42.0 bits), Expect = 0.00093, P = 0.00093
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 1 MSNSLYSFENDSLPKVRKPYTITKQREKWTEEEHQRFLDALKMYGRGWRQIEEHVGTKTA 60
M +S +F N+ L K + +R WT+E H+ FL L +G+ WR+I + K+
Sbjct: 57 MGSSRVAFPNE-LTKDMAQSSYQAERTIWTKETHEWFLIGLDRFGKDWRKIAVLLDCKSP 115
Query: 61 VQIRSHAQKFF 71
+Q+ +A+ F+
Sbjct: 116 IQVEIYAENFY 126
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.123 0.351 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 306 284 0.00085 115 3 11 23 0.45 34
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 38
No. of states in DFA: 615 (65 KB)
Total size of DFA: 210 KB (2116 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.58u 0.10s 27.68t Elapsed: 00:00:02
Total cpu time: 27.58u 0.10s 27.68t Elapsed: 00:00:02
Start: Mon May 20 22:56:21 2013 End: Mon May 20 22:56:23 2013