BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021879
(306 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q40784|AAPC_CENCI Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2
SV=1
Length = 329
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/305 (62%), Positives = 229/305 (75%), Gaps = 6/305 (1%)
Query: 5 IVHDKDGLPRIILTEPTGSSAEVLLYGGQVVSWKNERREELLFMSSKSFWKPPKAIRGGI 64
+V GL +++L AE+ LYGGQV SWKN+ EELLF+SSK+ +KPPKAIRGGI
Sbjct: 26 LVKTPSGLEKVVLRGARNCCAEIYLYGGQVTSWKNDNGEELLFLSSKAIFKPPKAIRGGI 85
Query: 65 PVCFPQFGNLGLLEQHGFARNRFWSLDEDASPLP--PANNQSTVDLILKSTEEDIKAWPR 122
P+C PQFG G LEQHGFARNRFWS+D D PLP PA ++ VDLIL+ EED+K WP
Sbjct: 86 PICLPQFGTHGNLEQHGFARNRFWSIDNDPPPLPVNPAI-KAFVDLILRPAEEDLKIWPH 144
Query: 123 GFELRLRISISP-GKLTLIPRVRNV--DNKAFSFMFALRNYLSVSDISEVRVEGLETLDY 179
FE RLR+++ P G L+L R+RN D + FS+ FA Y VSDISEVRVEGLET+DY
Sbjct: 145 SFEFRLRVALGPSGDLSLTSRIRNTNTDGRPFSYTFAYHTYFFVSDISEVRVEGLETMDY 204
Query: 180 FDYLMNKERFTEQADAITFDGEIDRVYLSTPTKIAIIDHEKKRTFELRKDGMPDSVVWNP 239
D L KERFTEQ DAI F+ E+D+VYL+ P+KIAIIDHEKK+TF + K+G+PD+VVWNP
Sbjct: 205 LDNLKAKERFTEQGDAIVFESEVDKVYLAAPSKIAIIDHEKKKTFVVTKEGLPDAVVWNP 264
Query: 240 WDKKAKALPDMGVDGYKTMLCVDSAAIENPIVLKPFEEWRGRQELSTVSSSYCSGQLDPR 299
WDKKAKA+ D G YK MLCV+ AA+E PI LKP EEWRGR LS V SSYCSGQLDP
Sbjct: 265 WDKKAKAMQDFGDAEYKNMLCVEPAAVEKPITLKPGEEWRGRIALSAVPSSYCSGQLDPL 324
Query: 300 RVLHG 304
+VLHG
Sbjct: 325 KVLHG 329
>sp|Q03161|YMY9_YEAST Glucose-6-phosphate 1-epimerase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YMR099C PE=1 SV=1
Length = 297
Score = 135 bits (339), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 141/297 (47%), Gaps = 23/297 (7%)
Query: 14 RIILTEPT--GSSAEVLLYGGQVVSWKNERREELLFMSSKSFWKPPKAIRGGIPVCFPQF 71
++LT P +S +L YG V SWK + EE L++S+ + K +RGGIP+ FP F
Sbjct: 9 EVVLTHPADETTSVHILKYGATVYSWK-LKSEEQLWLSTAAKLDGSKPVRGGIPLVFPVF 67
Query: 72 G------NLGLLEQHGFARNRFWSLDEDASPLPPANNQSTVDLILK---STEEDIKAWPR 122
G +L L QHG ARN W PP TV LK + E K WP
Sbjct: 68 GKNSTDEHLSKLPQHGLARNSTWEFLGQTKENPP-----TVQFGLKPEIANPELTKLWPM 122
Query: 123 GFELRLRISISPGKLTLIPRVRNVDN-KAFSFMFALRNYLSVSDISEVRVEGLETLDYFD 181
+ L L + + L V N + K F + Y + DI V L + +D
Sbjct: 123 DYLLILTVELGSDYLKTAIEVENTSSSKELKFNWLFHTYFRIEDIEGTMVSNLAGMKLYD 182
Query: 182 YLMNKERFTEQADAITFDGEIDRVY--LSTPTKIAIIDHEKKRTFELRKDGMPDSVVWNP 239
L+ KE + ++ +TF+ E D +Y +S I I+D + + L++ +PD+VVWNP
Sbjct: 183 QLL-KESYVDKHPVVTFNQETDVIYQNVSAERAIQIVD-KGVQIHTLKRYNLPDTVVWNP 240
Query: 240 WDKKAKALPDMG-VDGYKTMLCVDSAAIENPIVLKPFEEWRGRQELSTVSSSYCSGQ 295
W +K++ + D GY+ M+C++ + + I L P ++W Q L Y + Q
Sbjct: 241 WIEKSQGMADFEPKTGYQQMICIEPGHVHDFISLAPGKKWNAYQLLCKEELKYQAIQ 297
>sp|P39173|YEAD_ECOLI Putative glucose-6-phosphate 1-epimerase OS=Escherichia coli
(strain K12) GN=yeaD PE=1 SV=2
Length = 294
Score = 111 bits (278), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 122/261 (46%), Gaps = 21/261 (8%)
Query: 10 DGLPRIILTEPTGSSAEVLLYGGQVVSWKNERREELLFMSSKSFWKPPKAIRGGIPVCFP 69
D L I++ P A L G ++SWK EE+L++S+ + +K AIRGG+PVC+P
Sbjct: 24 DELDLIVVDHPQ-VKASFALQGAHLLSWKPAGEEEVLWLSNNTPFKNGVAIRGGVPVCWP 82
Query: 70 QFGNLGL--LEQHGFARNRFWSL---DEDASPLPPANNQSTVDLILKSTEEDIKAWPRGF 124
FG L HGFARN W+L EDA + + L +EE K WP F
Sbjct: 83 WFGPAAQQGLPAHGFARNLPWTLKSHHEDADGV-------ALTFELTQSEETKKFWPHDF 135
Query: 125 ELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDISEVRVEGLETLDYFDYLM 184
L + GK I + + F AL Y +V DI++V V GL D F +
Sbjct: 136 TLLAHFRV--GKTCEIDLESHGE---FETTSALHTYFNVGDIAKVSVSGLG--DRFIDKV 188
Query: 185 NKERFTEQADAI-TFDGEIDRVYLSTPTKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKK 243
N + D I TF DRVYL+ I D R + + V WNP
Sbjct: 189 NDAKENVLTDGIQTFPDRTDRVYLNPQDCSVINDEALNRIIAVGHQHHLNVVGWNPGPAL 248
Query: 244 AKALPDMGVDGYKTMLCVDSA 264
+ ++ DM DGYKT +CV++A
Sbjct: 249 SISMGDMPDDGYKTFVCVETA 269
>sp|P44160|Y1317_HAEIN Putative glucose-6-phosphate 1-epimerase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1317
PE=3 SV=1
Length = 271
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 41/236 (17%)
Query: 42 REELLFMSSKSFWKPPKAIRGGIPVCFPQFGNLGLLEQHGFARNRFWSLDEDASPLPPAN 101
++++L++S +K AIRGG+P+C+P FG + HG AR R W L +
Sbjct: 52 KQDVLWLSEVEPFKNGNAIRGGVPICYPWFGGVKQ-PAHGTARIRLWQLSHYYISVHKVR 110
Query: 102 NQSTVDLILKSTEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMF------ 155
+ FEL ++I K++++ D +F
Sbjct: 111 LE--------------------FELFSDLNIIEAKVSMV----FTDKCHLTFTHYGEESA 146
Query: 156 --ALRNYLSVSDISEVRVEGL-ETLDYFDYLMNKERFTEQADAITFDGEIDRVYLSTPTK 212
AL Y ++ DI++V V+GL ET F+ L ++ I+ + +D +Y + +
Sbjct: 147 QAALHTYFNIGDINQVEVQGLPETC--FNSLNQQQENVPSPRHISEN--VDCIYSAENMQ 202
Query: 213 IAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKALPDMGVDGYKTMLCVDSAAIEN 268
I+D RT L V+WNPW KK + + GY+ MLC+++A I +
Sbjct: 203 NQILDKSFNRTIALHHHNASQFVLWNPWHKKTSGMSE---TGYQKMLCLETARIHH 255
>sp|P42096|LACXC_LACLL Protein LacX, chromosomal OS=Lactococcus lactis subsp. lactis
GN=lacX PE=4 SV=1
Length = 299
Score = 40.0 bits (92), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 30/135 (22%)
Query: 31 GGQVVSWKNERREELLFMSSKSFWKPPKAIRGGIPVCFPQFGNL---------------- 74
GGQ+ S K++ E L+ + +W G P+ FP G+L
Sbjct: 18 GGQLTSIKDKDGLEYLWQADPEYWN------GQAPILFPICGSLRNDWAIYRPQDRPFFT 71
Query: 75 GLLEQHGFARNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISP 134
GL+ +HGF R ++L+E N+++V +K E + + FELR+ +++
Sbjct: 72 GLIRRHGFVRKEEFTLEE--------VNENSVTFSIKPNAEMLDNYLYQFELRVVYTLNG 123
Query: 135 GKLTLIPRVRNVDNK 149
+ +V N++ +
Sbjct: 124 KSIRTEFQVTNLETE 138
>sp|P23496|LACXP_LACLL Protein LacX, plasmid OS=Lactococcus lactis subsp. lactis GN=lacX
PE=2 SV=1
Length = 299
Score = 39.7 bits (91), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 30/135 (22%)
Query: 31 GGQVVSWKNERREELLFMSSKSFWKPPKAIRGGIPVCFPQFGNL---------------- 74
GGQ+ S K++ E L+ + +W G P+ FP G+L
Sbjct: 18 GGQLTSIKDKDGLEYLWQADPEYWN------GQAPILFPICGSLRNDWAIYRPQERPFFT 71
Query: 75 GLLEQHGFARNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISP 134
GL+ +HGF R ++L+E N+++V +K E + + FELR+ +++
Sbjct: 72 GLIRRHGFVRKEEFTLEE--------VNENSVTFSIKPNAEMLDNYLYQFELRVVYTLNG 123
Query: 135 GKLTLIPRVRNVDNK 149
+ +V N++ +
Sbjct: 124 KSIRTEFQVTNLETE 138
>sp|Q14244|MAP7_HUMAN Ensconsin OS=Homo sapiens GN=MAP7 PE=1 SV=1
Length = 749
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 1 MPLNIVHDKDGL--PRIILTEPTGSSAEVLLYGGQVVSWKNER-REELLFMSS 50
MP H ++ + P++ +T P GSS +++G S+K ER RE +LF++S
Sbjct: 258 MPYKAAHSRNSMDRPKLFVTPPEGSSRRRIIHG--TASYKKERERENVLFLTS 308
>sp|O19111|KPCZ_RABIT Protein kinase C zeta type OS=Oryctolagus cuniculus GN=PRKCZ PE=2
SV=1
Length = 591
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 9/91 (9%)
Query: 67 CFPQFGNLGLLEQHGFARNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFEL 126
C PQ G ++ H F R+ W L E LPP Q T D L +++ + P
Sbjct: 502 CRPQTG-FSDIKSHAFFRSIDWDLLEKKQALPPFQPQITDDYGLDNSDTQFTSEP----- 555
Query: 127 RLRISISPGKLTLIPRVRNVDNKAFSFMFAL 157
+ ++P +I R+ + + F ++ L
Sbjct: 556 ---VQLTPDDEDVIKRIDQSEFEGFEYINPL 583
>sp|A1SRV2|MEND_PSYIN 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate
synthase OS=Psychromonas ingrahamii (strain 37) GN=menD
PE=3 SV=1
Length = 581
Score = 32.0 bits (71), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 137 LTLIPRVRNVDN-KAFSFMFALRNYLSVSDISEVRVEGLETLDYFDYLMNKERFTE---Q 192
L + RV ++ +A + AL NY ++D+ L Y+D L+ ++FTE Q
Sbjct: 239 LVIAGRVTGINQAQAIAEFAALNNYPLLADLQSALTGNANNLHYYDLLLVNKQFTENLQQ 298
Query: 193 ADAIT-FDGEI 202
AD I F G++
Sbjct: 299 ADIIVQFGGKL 309
>sp|Q28115|GFAP_BOVIN Glial fibrillary acidic protein OS=Bos taurus GN=GFAP PE=2 SV=2
Length = 428
Score = 31.2 bits (69), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 151 FSFMFALRNYLSVSDISEVRVEGLETLDYFDYLMNKERFTEQADAITFDGEIDRVYLSTP 210
FS AL + + SE R E +E D F + K RF EQ + E++++ P
Sbjct: 48 FSLAGALNSGFKETRASE-RAEMMELNDRFASYIEKVRFLEQQNK-ALAAELNQLRAKEP 105
Query: 211 TKIAIIDHEKKRTFELRKDGM 231
TK+A + + R LR D +
Sbjct: 106 TKLADVYQAELRELRLRLDQL 126
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 119,792,840
Number of Sequences: 539616
Number of extensions: 5027011
Number of successful extensions: 11020
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 11002
Number of HSP's gapped (non-prelim): 17
length of query: 306
length of database: 191,569,459
effective HSP length: 117
effective length of query: 189
effective length of database: 128,434,387
effective search space: 24274099143
effective search space used: 24274099143
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)