Query 021881
Match_columns 306
No_of_seqs 192 out of 2174
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 10:42:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021881.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021881hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mkt_A Multi antimicrobial ext 99.9 4.7E-27 1.6E-31 217.4 18.9 274 19-304 5-297 (460)
2 3mkt_A Multi antimicrobial ext 99.9 1.5E-24 5E-29 200.7 21.1 201 19-220 231-438 (460)
3 4hkr_A Calcium release-activat 45.0 1.1E+02 0.0039 24.1 14.8 81 57-138 56-144 (214)
4 4av3_A K(+)-stimulated pyropho 14.8 7.8E+02 0.027 23.6 9.1 71 23-94 603-675 (735)
5 2jek_A RV1873; structural geno 7.6 6.9E+02 0.024 18.4 5.4 90 89-180 52-142 (145)
6 1nkz_B Light-harvesting protei 7.3 3.8E+02 0.013 15.1 3.0 30 98-127 7-37 (41)
7 4ev6_A Magnesium transport pro 6.3 2.1E+02 0.0071 24.3 1.7 6 245-250 333-338 (339)
8 1lgh_B LH II, B800/850, light 6.2 4.2E+02 0.014 15.2 2.4 29 98-126 12-41 (45)
9 2iub_A CORA, divalent cation t 6.0 2.5E+02 0.0086 24.0 2.2 18 186-204 311-328 (363)
10 2gsl_A Hypothetical protein; a 4.5 9.7E+02 0.033 17.3 4.2 31 81-111 97-127 (137)
No 1
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=99.95 E-value=4.7e-27 Score=217.44 Aligned_cols=274 Identities=15% Similarity=0.199 Sum_probs=225.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCC
Q 021881 19 SQVVEELKELWGMALPMTGMNILVFIRAVVSVLFLGRLGSLELAGGALSIGFTNITGYSVLVGLASGLEPVCSQAYGSKN 98 (306)
Q Consensus 19 ~~~~~~~k~~l~~~~P~~~~~~~~~~~~~~~~~~i~~~g~~~~a~~~~~~~i~~l~~~~~~~gi~~a~~~~~s~~~g~~~ 98 (306)
+..++..|++++.++|.+++++...+.+.+|+.+++++|++++++++++.++.++. ..+..+++.+..|.++|++|++|
T Consensus 5 ~~~~~~~k~~~~~~~p~~~~~~~~~~~~~v~~~~~~~lg~~~~~~~~~~~~i~~~~-~~~~~g~~~~~~~~is~~~g~~~ 83 (460)
T 3mkt_A 5 HRYKKEASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPS-ILFGVGLLMALVPVVAQLNGAGR 83 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTTTSSHHHHHHHHHHHH-HHHHHHHHHHHGGGCTTTTSSSS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCC
Confidence 34568899999999999999999999999999999999999999999999998887 88889999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCchHHH
Q 021881 99 WDLLSLSLQRMILILFFAIIPISLLWLNLETVMIFMGQDKDITAMAATYTLYALPDLLTNTLLQPLRVFLRSQKVTKPMM 178 (306)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~il~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 178 (306)
+|+.++.++.+..+.++.+++..+++.+.++++.+++.|++..+.+..|+++.+++.++..+..++.+++++.||++.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 163 (460)
T 3mkt_A 84 QHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMATKTVGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAM 163 (460)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCSSTTHHHHHHHHHHTTGGGHHHHHHHHHHHTTTTCTTSCCTTTH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH
Confidence 99999999999999999999887677888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHhh-c---CCChhhhHHHHHHHHHHHHHHHhhhhhhhhHHhhhhhhhhhhheeee-cc---cc
Q 021881 179 WCTLVAVMFHVPLNYCLVMK-L---KLGVPGVAMASVVCNLNMLKIGFSGLWFGLLSAQAACAVSILYVVLV-RT---DW 250 (306)
Q Consensus 179 ~~~~i~~~~~i~l~~~li~~-~---~~G~~Ga~~a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~ 250 (306)
+.++++.++|+++++++++. + ++|+.|+++|+.+++.+..++....+++. ......+ ++ ++
T Consensus 164 ~~~~~~~~~~i~l~~~li~~~~~~p~~g~~g~a~a~~i~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~ 232 (460)
T 3mkt_A 164 VIGFIGLLLNIPLNWIFVYGKFGAPELGGVGCGVATAIVYWIMLLLLLFYIVTS-----------KRLAHVKVFETFHKP 232 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTC-----------SSCCCCCCSCCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHhC-----------cchhhhhhhhccccc
Confidence 99999999999999999975 3 69999999999999999887632222210 0000000 01 11
Q ss_pred hHHHHHHhhh-----------hHHHHHHHHhhcCCCchhhHHHHHHHHhhhhHHHHHhhhhhcCC
Q 021881 251 EAEAMKAMKL-----------TSLEISTFNAGAGDTNEEEEEEESKGLLLYGICFRLLDAFFSGW 304 (306)
Q Consensus 251 ~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~a~~~i~~~i~~~~~~~~~~~~~~~ 304 (306)
+++..|+..+ ............+..|+++++++++..++.++.+++..+++.++
T Consensus 233 ~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~va~~~i~~~i~~~~~~~~~~~~~a~ 297 (460)
T 3mkt_A 233 QPKELIRLFRLGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAV 297 (460)
T ss_dssp TTSSTTTSHHHHHHHHHHHHHHHHHHHHHHHHTCTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111100 11111222223455699999999999999999999999987653
No 2
>3mkt_A Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux...; multidrug transporter, cation-bound, transport protein; 3.65A {Vibrio cholerae} PDB: 3mku_A
Probab=99.93 E-value=1.5e-24 Score=200.68 Aligned_cols=201 Identities=15% Similarity=0.209 Sum_probs=190.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCC
Q 021881 19 SQVVEELKELWGMALPMTGMNILVFIRAVVSVLFLGRLGSLELAGGALSIGFTNITGYSVLVGLASGLEPVCSQAYGSKN 98 (306)
Q Consensus 19 ~~~~~~~k~~l~~~~P~~~~~~~~~~~~~~~~~~i~~~g~~~~a~~~~~~~i~~l~~~~~~~gi~~a~~~~~s~~~g~~~ 98 (306)
+.+++..|++++++.|..++++...+...+|+.+++++|++++++|+++.++.++. ..+..+++++..|.+++++|++|
T Consensus 231 ~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~va~~~i~~~i~~~~-~~~~~~~~~a~~p~i~~~~g~~~ 309 (460)
T 3mkt_A 231 KPQPKELIRLFRLGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLV-FMFPMSIGAAVSIRVGHKLGEQD 309 (460)
T ss_dssp SSTTSSTTTSHHHHHHHHHHHHHHHHHHHHHHHHTCTTSSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHSSC
T ss_pred ccCHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCC
Confidence 45677899999999999999999999999999999999999999999999999998 89999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHH-HHHhHHHHHHHcCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCchHH
Q 021881 99 WDLLSLSLQRMILILFFAIIPISL-LWLNLETVMIFMGQDKDITAMAATYTLYALPDLLTNTLLQPLRVFLRSQKVTKPM 177 (306)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~il~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~l~~~g~~~~~ 177 (306)
+|++++..++...+...++++..+ ++.+++++..++.+|+++.+.+..++++++++.++.+++.+..+++++.||+|.+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 389 (460)
T 3mkt_A 310 TKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQVVVALAMQLLLFAAIYQCMDAVQVVAAGSLRGYKDMTAI 389 (460)
T ss_dssp CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHH
Confidence 999999999999999999999865 6899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-HHHHHhHHHHHhh----cC-CChhhhHHHHHHHHHHHHHH
Q 021881 178 MWCTLVAV-MFHVPLNYCLVMK----LK-LGVPGVAMASVVCNLNMLKI 220 (306)
Q Consensus 178 ~~~~~i~~-~~~i~l~~~li~~----~~-~G~~Ga~~a~~i~~~~~~~~ 220 (306)
++.++++. ++++++++++.+. .+ +|+.|+++|+.+++.+..++
T Consensus 390 ~~~~~~~~~~~~i~l~~~l~~~~~~~~~~~G~~G~~~a~~~~~~~~~~~ 438 (460)
T 3mkt_A 390 FHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALM 438 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSSCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccccccCchhHHHHHHHHHHHHHHH
Confidence 99999999 9999999999986 56 99999999999999988865
No 3
>4hkr_A Calcium release-activated calcium channel protein; ORAI1, eukaryotic membrane protein, membran protein, ION channel, STIM, membrane; 3.35A {Drosophila melanogaster} PDB: 4hks_A
Probab=45.04 E-value=1.1e+02 Score=24.09 Aligned_cols=81 Identities=9% Similarity=-0.008 Sum_probs=50.8
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHh--------cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 021881 57 GSLELAGGALSIGFTNITGYSVLVGLASGLEPVCSQAY--------GSKNWDLLSLSLQRMILILFFAIIPISLLWLNLE 128 (306)
Q Consensus 57 g~~~~a~~~~~~~i~~l~~~~~~~gi~~a~~~~~s~~~--------g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 128 (306)
.+.-+.+|++...+.-.. ..+..-+++=.-|.+...- .+.-++|.+.+.-..-.++..+|+++.+.-+..-
T Consensus 56 p~~LLi~fav~Ttllv~v-ml~AlMIsTcILPnIeav~~~h~~~~v~esPH~r~~~yIE~AW~fST~lGi~LFL~evall 134 (214)
T 4hkr_A 56 PPGMLIAFAICTTLLVAV-HMLALMISTCILPNIETVSNLHSISLVHESPHERLHWYIETAWAFSTLLGLILFLLEIAIL 134 (214)
T ss_dssp ---CHHHHHHHHHHHHHH-HHHHHHHHHHTTTC----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHH-HHHHHHHHHHhHHHHHHHhhcccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344588899888887766 6777777766666555432 2345678888888888888888888766544444
Q ss_pred HHHHHcCCCH
Q 021881 129 TVMIFMGQDK 138 (306)
Q Consensus 129 ~il~~~~~~~ 138 (306)
-.++++..++
T Consensus 135 ~WVKF~~~~~ 144 (214)
T 4hkr_A 135 CWVKFYDLSR 144 (214)
T ss_dssp HHHHHTTTCH
T ss_pred heEEeecCCc
Confidence 4556666554
No 4
>4av3_A K(+)-stimulated pyrophosphate-energized sodium PU; hydrolase, membrane pyrophosphotase, ION pump; 2.60A {Thermotoga maritima} PDB: 4av6_A
Probab=14.81 E-value=7.8e+02 Score=23.58 Aligned_cols=71 Identities=11% Similarity=0.074 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhc-cChhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHh
Q 021881 23 EELKELWGMALPMTGMNIL-VFIRAVVSVLFLGR-LGSLELAGGALSIGFTNITGYSVLVGLASGLEPVCSQAY 94 (306)
Q Consensus 23 ~~~k~~l~~~~P~~~~~~~-~~~~~~~~~~~i~~-~g~~~~a~~~~~~~i~~l~~~~~~~gi~~a~~~~~s~~~ 94 (306)
.++++...++.-..+.++. ..+...+.-..++. +|+++++++=++..+..++ ..+.+.=+-+.-=-.=++.
T Consensus 603 Pdy~~cV~I~T~~AlkeMi~p~~l~v~~P~~vg~~~g~~~l~g~L~g~~v~G~~-~Ai~m~n~GGAWDNAKK~i 675 (735)
T 4av3_A 603 PDYNRCIEITSDNALKQMGYPAFIAILTPLVTGFLLGAEFVGGVLIGTVLSGAM-LAILTANSGGAWDNAKKYL 675 (735)
T ss_dssp --CHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH-HHHHHhcCccHHhhhHHhh
Confidence 4556666666555555553 23333334455565 7999999998888887776 5555544444333333333
No 5
>2jek_A RV1873; structural genomics, unknown function, hypothetical protein, right-handed superhelix, TB structural genomics consortium; 1.38A {Mycobacterium tuberculosis} SCOP: a.255.1.1
Probab=7.63 E-value=6.9e+02 Score=18.38 Aligned_cols=90 Identities=9% Similarity=0.003 Sum_probs=55.0
Q ss_pred HHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCCHHHHHHHHHHHHHHHhhHH-HHHHHHHHHHH
Q 021881 89 VCSQAYGSKNWDLLSLSLQRMILILFFAIIPISLLWLNLETVMIFMGQDKDITAMAATYTLYALPDLL-TNTLLQPLRVF 167 (306)
Q Consensus 89 ~~s~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~il~~~~~~~~~~~~~~~~l~i~~~~~~-~~~~~~~~~~~ 167 (306)
-.++.||-++.++++.++..-..-.=+.-..-.++-.-....-.+|+..++..-. .-+-.+.-..+ -..+..++..+
T Consensus 52 ~~A~~YgI~sl~EA~AYL~hpvLg~RL~e~~~~ll~~~~~sa~~IfG~~D~~Klr--SsMTLFa~a~~~~~~F~~vL~~~ 129 (145)
T 2jek_A 52 PLAVRYGISSLEEAQAYLQHDLLGPRLHECTGLVNQVQGRSIEEIFGPPDDLKLC--SSMTLFARATDANQDFVALLAKY 129 (145)
T ss_dssp HHHHHTSBCSHHHHHHHHHSTTHHHHHHHHHHHHHHCCSCCHHHHSCTTHHHHHH--HHHHHHHHHCSCCHHHHHHHHHH
T ss_pred hhhhHhccCCHHHHHHHHcChHHHHHHHHHHHHHHhccCCCHHHHcCChhHHHHH--hHHHHHHHcCCCchHHHHHHHHH
Confidence 4589999999999999998776655444333333333445666778765433211 11111111112 24677888899
Q ss_pred HHHcCCchHHHHH
Q 021881 168 LRSQKVTKPMMWC 180 (306)
Q Consensus 168 l~~~g~~~~~~~~ 180 (306)
+.|..|.++.-..
T Consensus 130 f~G~~D~~Tl~~L 142 (145)
T 2jek_A 130 YGGGEDRRTVALL 142 (145)
T ss_dssp STTCCCHHHHHHH
T ss_pred cCCCCCHHHHHHh
Confidence 9999988766443
No 6
>1nkz_B Light-harvesting protein B-800/850, beta chain; light harvesting complex II, trans-membrane helices, rhodopi glucoside; HET: CXM RG1 BOG BCL; 2.00A {Rhodoblastus acidophilus} SCOP: f.3.1.1 PDB: 1kzu_B* 2fkw_B* 1ijd_B*
Probab=7.31 E-value=3.8e+02 Score=15.08 Aligned_cols=30 Identities=7% Similarity=-0.104 Sum_probs=19.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHH-HHHHHhH
Q 021881 98 NWDLLSLSLQRMILILFFAIIPI-SLLWLNL 127 (306)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~ 127 (306)
+-++..+.+.+++.....++++. .+.+...
T Consensus 7 EA~EfH~~~~~~~~~F~~iA~vAH~l~w~wr 37 (41)
T 1nkz_B 7 QSEELHKYVIDGTRVFLGLALVAHFLAFSAT 37 (41)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 34667777777777777777776 4444443
No 7
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=6.28 E-value=2.1e+02 Score=24.27 Aligned_cols=6 Identities=33% Similarity=1.138 Sum_probs=3.4
Q ss_pred eecccc
Q 021881 245 LVRTDW 250 (306)
Q Consensus 245 ~~~~~~ 250 (306)
++|++|
T Consensus 333 fkrk~W 338 (339)
T 4ev6_A 333 FRRSGW 338 (339)
T ss_dssp HHTTTC
T ss_pred HHHcCC
Confidence 345666
No 8
>1lgh_B LH II, B800/850, light harvesting complex II; bacteriochlorophyll, dexter energy transfer, foerster exciton transfer mechanism; HET: BCL LYC DET HTO; 2.40A {Phaeospirillum molischianum} SCOP: f.3.1.1
Probab=6.21 E-value=4.2e+02 Score=15.23 Aligned_cols=29 Identities=7% Similarity=0.079 Sum_probs=18.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHH-HHHHHh
Q 021881 98 NWDLLSLSLQRMILILFFAIIPI-SLLWLN 126 (306)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~ 126 (306)
+-++..+.+.+++.....++++. .+.+..
T Consensus 12 EA~EfH~~~~~~~~~F~~iA~vAH~L~~~w 41 (45)
T 1lgh_B 12 EAIAVHDQFKTTFSAFIILAAVAHVLVWVW 41 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34567777777777777777666 334443
No 9
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=6.04 E-value=2.5e+02 Score=24.04 Aligned_cols=18 Identities=11% Similarity=0.290 Sum_probs=6.2
Q ss_pred HHHHHhHHHHHhhcCCChh
Q 021881 186 MFHVPLNYCLVMKLKLGVP 204 (306)
Q Consensus 186 ~~~i~l~~~li~~~~~G~~ 204 (306)
.+-+|++++-..+ +|++.
T Consensus 311 ~IflP~T~IaGiy-GMNf~ 328 (363)
T 2iub_A 311 TIFMPLTFIAGIY-GMNFE 328 (363)
T ss_dssp HHHHHHHHHTTSC-C----
T ss_pred HHHHHHHHHHhhh-cccCC
Confidence 3335555554332 44443
No 10
>2gsl_A Hypothetical protein; alpha-helical protein, structural genomics, PSI, protein STR initiative; 2.60A {Fusobacterium nucleatum subsp}
Probab=4.55 E-value=9.7e+02 Score=17.26 Aligned_cols=31 Identities=19% Similarity=0.157 Sum_probs=23.6
Q ss_pred HHHhhHHHHHHHHhcCCChhHHHHHHHHHHH
Q 021881 81 GLASGLEPVCSQAYGSKNWDLLSLSLQRMIL 111 (306)
Q Consensus 81 gi~~a~~~~~s~~~g~~~~~~~~~~~~~~~~ 111 (306)
-.+++...+++..|=.++.+++++++.....
T Consensus 97 ~~At~fEALiGaLYLd~~~erl~~ll~~~~~ 127 (137)
T 2gsl_A 97 KEATALEAIIGAMYLLKKEEEIKKIINIVIK 127 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3566778888888878888888888876653
Done!