Query 021885
Match_columns 306
No_of_seqs 162 out of 1567
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 10:46:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021885.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021885hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qb0_A Actin-related protein 4 100.0 3.5E-63 1.2E-67 472.0 25.6 286 2-297 21-416 (498)
2 3dwl_A Actin-related protein 3 100.0 4.7E-64 1.6E-68 473.0 16.8 292 3-297 4-329 (427)
3 1k8k_B ARP2, actin-like protei 100.0 2.5E-59 8.5E-64 438.3 12.4 297 4-304 6-303 (394)
4 2fxu_A Alpha-actin-1, actin, a 100.0 1.8E-57 6E-62 423.3 22.1 297 2-304 3-299 (375)
5 4fo0_A Actin-related protein 8 100.0 1.9E-55 6.6E-60 432.2 18.9 296 4-304 15-506 (593)
6 1k8k_A ARP3, actin-like protei 100.0 6.8E-52 2.3E-56 390.9 25.0 296 3-304 4-321 (418)
7 4am6_A Actin-like protein ARP8 100.0 6.8E-49 2.3E-53 377.1 18.6 264 1-273 37-396 (655)
8 1jce_A ROD shape-determining p 99.9 3.1E-25 1.1E-29 203.4 16.0 260 4-292 3-274 (344)
9 3h1q_A Ethanolamine utilizatio 99.6 7.3E-15 2.5E-19 129.8 15.3 168 5-218 29-197 (272)
10 2v7y_A Chaperone protein DNAK; 99.5 2.1E-14 7.1E-19 138.1 12.1 199 5-220 3-245 (509)
11 1dkg_D Molecular chaperone DNA 99.4 8.8E-12 3E-16 115.3 16.1 119 101-220 135-276 (383)
12 3qfu_A 78 kDa glucose-regulate 99.4 2.5E-12 8.5E-17 119.3 12.0 96 100-196 152-256 (394)
13 3i33_A Heat shock-related 70 k 99.2 4.4E-11 1.5E-15 111.4 12.5 95 101-196 158-264 (404)
14 2fsj_A Hypothetical protein TA 99.2 4.8E-11 1.6E-15 109.1 11.0 180 5-197 22-240 (346)
15 1yuw_A Heat shock cognate 71 k 99.1 4.6E-09 1.6E-13 101.8 17.4 117 102-219 140-276 (554)
16 2kho_A Heat shock protein 70; 98.9 1.6E-08 5.5E-13 99.0 15.2 118 101-219 135-275 (605)
17 3d2f_A Heat shock protein homo 98.8 4.4E-08 1.5E-12 96.9 15.0 117 102-219 139-280 (675)
18 4gni_A Putative heat shock pro 98.8 7.1E-08 2.4E-12 89.8 13.6 113 82-197 130-256 (409)
19 4b9q_A Chaperone protein DNAK; 98.7 1.3E-07 4.6E-12 92.5 14.6 112 82-196 115-242 (605)
20 2ych_A Competence protein PILM 98.7 1.2E-06 4E-11 80.6 17.8 88 123-221 158-252 (377)
21 3js6_A Uncharacterized PARM pr 98.6 2.8E-07 9.7E-12 84.3 10.8 190 1-197 1-232 (355)
22 4apw_A ALP12; actin-like prote 98.5 3.7E-07 1.3E-11 82.7 8.6 186 1-196 4-219 (329)
23 2zgy_A Plasmid segregation pro 98.4 6.1E-07 2.1E-11 80.8 9.1 87 126-216 136-229 (320)
24 4a2a_A Cell division protein F 98.3 1.9E-05 6.4E-10 73.7 16.1 85 124-219 176-265 (419)
25 2d0o_A DIOL dehydratase-reacti 95.4 0.031 1E-06 53.1 7.3 74 137-221 390-468 (610)
26 1nbw_A Glycerol dehydratase re 95.4 0.031 1.1E-06 53.1 7.2 74 137-221 392-470 (607)
27 1t6c_A Exopolyphosphatase; alp 95.3 0.035 1.2E-06 49.5 7.0 73 115-190 97-177 (315)
28 1u6z_A Exopolyphosphatase; alp 94.0 0.12 4.1E-06 49.2 7.5 73 115-190 96-176 (513)
29 3mdq_A Exopolyphosphatase; str 93.7 0.058 2E-06 48.0 4.6 73 115-190 89-170 (315)
30 3hi0_A Putative exopolyphospha 93.2 0.43 1.5E-05 45.3 10.0 72 115-189 100-178 (508)
31 3aap_A Ectonucleoside triphosp 93.1 0.86 3E-05 41.1 11.4 101 80-184 52-177 (353)
32 3cet_A Conserved archaeal prot 90.1 0.26 8.8E-06 44.0 4.3 26 149-174 127-152 (334)
33 3djc_A Type III pantothenate k 83.2 7.6 0.00026 33.3 9.7 18 6-23 4-21 (266)
34 2h3g_X Biosynthetic protein; p 81.9 5.3 0.00018 34.4 8.2 18 6-23 2-19 (268)
35 3cer_A Possible exopolyphospha 80.0 1.2 4.1E-05 39.9 3.5 75 115-190 102-191 (343)
36 2qm1_A Glucokinase; alpha-beta 74.0 13 0.00046 32.1 8.7 51 121-173 101-158 (326)
37 3vgl_A Glucokinase; ROK family 73.7 14 0.00047 32.3 8.6 52 120-173 88-146 (321)
38 3bex_A Type III pantothenate k 70.7 45 0.0015 28.0 10.9 18 6-23 5-22 (249)
39 1zbs_A Hypothetical protein PG 69.6 30 0.001 29.5 9.8 68 104-172 63-132 (291)
40 2ch5_A NAGK protein; transfera 64.1 57 0.002 28.3 10.7 89 80-171 49-143 (347)
41 1zc6_A Probable N-acetylglucos 63.3 71 0.0024 27.3 11.1 87 80-172 53-145 (305)
42 4fo0_A Actin-related protein 8 55.6 4.3 0.00015 38.8 1.8 37 238-274 333-373 (593)
43 3vov_A Glucokinase, hexokinase 53.3 1E+02 0.0036 26.2 10.3 53 120-174 90-149 (302)
44 2gup_A ROK family protein; sug 47.7 37 0.0012 28.8 6.4 53 119-174 86-143 (292)
45 1saz_A Probable butyrate kinas 46.4 82 0.0028 28.1 8.7 55 118-174 110-200 (381)
46 1djx_A PLC-D1, phosphoinositid 43.8 15 0.0005 35.6 3.4 45 80-130 235-279 (624)
47 2zkm_X 1-phosphatidylinositol- 39.0 22 0.00077 35.5 3.9 45 80-130 385-430 (799)
48 2e2o_A Hexokinase; acetate and 37.1 1.9E+02 0.0063 24.3 10.8 61 103-170 62-123 (299)
49 3qr0_A Phospholipase C-beta (P 33.0 32 0.0011 34.4 3.9 45 80-130 394-438 (816)
50 3cj1_A Ectonucleoside triphosp 32.6 38 0.0013 31.3 4.2 35 149-183 190-225 (456)
51 2aa4_A Mannac kinase, putative 28.6 1.1E+02 0.0038 25.6 6.3 51 120-173 88-145 (289)
52 3zx3_A Ectonucleoside triphosp 28.5 43 0.0015 31.0 3.7 89 81-170 89-202 (452)
53 3djc_A Type III pantothenate k 25.2 1.2E+02 0.004 25.7 5.7 48 152-199 5-53 (266)
54 2yrb_A Protein fantom; beta sa 23.3 55 0.0019 25.5 2.9 72 124-199 19-91 (156)
55 2ap1_A Putative regulator prot 22.5 1.6E+02 0.0056 25.1 6.3 52 121-174 113-171 (327)
56 3r8e_A Hypothetical sugar kina 22.4 1.7E+02 0.0057 25.1 6.3 51 121-173 110-168 (321)
No 1
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-63 Score=471.96 Aligned_cols=286 Identities=23% Similarity=0.376 Sum_probs=255.2
Q ss_pred CCCCeEEEeCCCceEEEeecCCCCCCccCCceEEEeCccchhhhhcccCCceEeccc-cccccCCceeeceeecCeeech
Q 021885 2 DNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAA-ALDLRHQLDVSYPVNNGIVQNW 80 (306)
Q Consensus 2 ~~~~~vViD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~p~~~g~i~~~ 80 (306)
++.++||||+||++||+||+|++.|+.++||++++++... .+..++|++ +...++.+.+++|+++|+|+||
T Consensus 21 de~~~iVID~GS~~~kaG~ag~~~P~~v~PSvVg~~~~~~--------~~~~~vG~e~~~~~r~~l~l~~Pi~~GvI~dw 92 (498)
T 3qb0_A 21 DEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADE--------GNKKIFSEQSIGIPRKDYELKPIIENGLVIDW 92 (498)
T ss_dssp CCBSCEEEECCSSEEEEEETTCSSCSEEEESEEEEESSCS--------SCCEECCTTGGGSCCTTEEEEESEETTEESCH
T ss_pred CCCCeEEEECCCcEEEEEECCCCCeeeecCceeEEeccCC--------CccEEEecHHHhcCcCceEEeccCcCCEEccH
Confidence 5678999999999999999999999999999999976431 346789997 5667888999999999999999
Q ss_pred hhHHHHHHHHhhcccCCCCCCC-eeEEecCCCCCHHHHHHHHHHhhhhcCCceeeeehhhhHhhhhcCCCeEEEEecCCC
Q 021885 81 EDMGQVWDHAFFSELKIDPPEC-KILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDG 159 (306)
Q Consensus 81 d~l~~ll~~~~~~~L~~~~~~~-~vll~e~~~~~~~~r~~l~e~lfE~~~v~~v~~~~~~~ls~~~~g~~tglVVDiG~~ 159 (306)
|.++++|+|+|.+.|++++.++ |+|+++|+++++..|++++|++||+|++|+++++.+++||+||+|++||+|||+|++
T Consensus 93 d~~E~iw~~~f~~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~tglVVDiG~g 172 (498)
T 3qb0_A 93 DTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHD 172 (498)
T ss_dssp HHHHHHHHHHHHHTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCSSEEEEEECSS
T ss_pred HHHHHHHHHHHHhhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCCeEEEEEcCCC
Confidence 9999999999988899999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEeecceecccceEEecccchhHHHHHHHHHhhc------------------CCccccC------C-hHHHHHHHH
Q 021885 160 VTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRR------------------GYSMNRT------A-DFETVRQIK 214 (306)
Q Consensus 160 ~t~v~pV~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~------------------~~~~~~~------~-~~~~~~~iK 214 (306)
.|+|+||++|++++++++++++||+++|++|.++|+.+ ++.+... . ++++++++|
T Consensus 173 ~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L~~lL~~~~i~P~~~i~~k~~~~~~~~~~~~~~~s~~~~~~~~~iv~~iK 252 (498)
T 3qb0_A 173 TCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECK 252 (498)
T ss_dssp CEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHTTTSCCCCSTTEEECSSSCEECCCSSCCCHHHHHHHHHHTHHHHHH
T ss_pred cEEEEEEeCCEEccccceeccccHHHHHHHHHHHHHhccccchhhhcccccccccccCCCccCccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999865 2333221 1 455999999
Q ss_pred Hhccccccc--hHHHHhhcccCCcccceEECCCccEEEECCc-cccccccCCCCCCCCC---------------------
Q 021885 215 EKLCYISYD--YKREYQLGLETTILVKNYTLPDGRVIKVGTE-RFQAPEALFTPVSLYF--------------------- 270 (306)
Q Consensus 215 e~~~~vs~d--~~~~~~~~~~~~~~~~~y~lPdg~~i~l~~e-r~~~~E~lF~P~~~g~--------------------- 270 (306)
|++|||+.| +..+.. ...+...+.|+||||+.|.+++| ||.+||.||+|+++|+
T Consensus 253 E~~c~Va~~~~~~~~~~--~~~~~~~~~yeLPDG~~i~lg~E~Rf~~pE~LF~P~~~g~~~~~~~~~~~~~~~~~~~y~~ 330 (498)
T 3qb0_A 253 ETLCHICPTKTLEETKT--ELSSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVP 330 (498)
T ss_dssp HHTCCCCSSCHHHHHHH--HHHTCCCEEEECSSSCEEEECHHHHHHHHHTTTSCCGGGSCTTSCCCSSSCCCCCSCCCCC
T ss_pred HhhEEecCCccHhHHhh--hccCcCceEEECCCCCEEEECchHhhhCchhhCCHhHcCCccccccccccccccccccccc
Confidence 999999997 544321 22345678999999999999999 9999999999998866
Q ss_pred -----------------------------------------------------------CCcccchhhhhcccccCCCch
Q 021885 271 -----------------------------------------------------------FSVVFYPLKLTHAIHCSCSTE 291 (306)
Q Consensus 271 -----------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~ 291 (306)
+..||++++.++|.+|++|-|
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~~sI~~cd~d~r 410 (498)
T 3qb0_A 331 LKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIMSSDVDLR 410 (498)
T ss_dssp CCBCC-----------------------------------------------------CCSCCHHHHHHHHHHTSCTTTH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCchHHHHHHHHhCCHHHH
Confidence 668999999999999999999
Q ss_pred hhhhhc
Q 021885 292 HAIIST 297 (306)
Q Consensus 292 ~~~~~~ 297 (306)
++|+.+
T Consensus 411 ~~L~~n 416 (498)
T 3qb0_A 411 ATLAHN 416 (498)
T ss_dssp HHHHTT
T ss_pred HHHhcC
Confidence 977754
No 2
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.7e-64 Score=473.03 Aligned_cols=292 Identities=35% Similarity=0.584 Sum_probs=246.4
Q ss_pred CCCeEEEeCCCceEEEeecCCCCCCccCCceEEEeCccchh-------------------h-hhcccCCceEeccccccc
Q 021885 3 NRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEE-------------------S-LMEQELKDTIVGAAALDL 62 (306)
Q Consensus 3 ~~~~vViD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~-------------------~-~~~~~~~~~~~g~~~~~~ 62 (306)
..++||||+||+++|+||||++.|+++|||++|+++++... . ..+...+++++|+++...
T Consensus 4 ~~~~iViDnGs~~~KaG~ag~~~P~~v~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~ea~~~ 83 (427)
T 3dwl_A 4 FNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDALKK 83 (427)
T ss_dssp CCSCEEECCCSSBC-CEETTSSSCSCCCBCCEECC------------------------------CCSSCCEETHHHHHT
T ss_pred CCCeEEEECCCCeEEEEECCCCCCCCcCCceEEeecccccccccccccccccccccccccccccCcccCCeEEchHHhhC
Confidence 57899999999999999999999999999999998754100 0 002334588999999877
Q ss_pred cC-CceeeceeecCeeechhhHHHHHHHHhhcccCCCCCCCeeEEecCCCCCHHHHHHHHHHhhhhcCCceeeeehhhhH
Q 021885 63 RH-QLDVSYPVNNGIVQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVL 141 (306)
Q Consensus 63 ~~-~~~~~~p~~~g~i~~~d~l~~ll~~~~~~~L~~~~~~~~vll~e~~~~~~~~r~~l~e~lfE~~~v~~v~~~~~~~l 141 (306)
+. .+.+++|+++|+|+|||.++++|+|+|++.|++++.++|++++||+++++..|++++|++||+|++|++|++.+++|
T Consensus 84 ~~~~l~~~~Pi~~GvI~dwd~~e~iw~~~~~~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vl 163 (427)
T 3dwl_A 84 ASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVL 163 (427)
T ss_dssp HHHHCCCCCSEETTEECCHHHHHHHHHHHHHTTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHH
T ss_pred cccCcEEecCcccCeeccHHHHHHHHHHHHhHhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHH
Confidence 75 78899999999999999999999999988999999999999999999999999999999999999999999999999
Q ss_pred hhhhcC--------CCeEEEEecCCCceEEEEeecceecccceEEecccchhHHHHHHHHHhhcCCccccCChHHHHHHH
Q 021885 142 TLYAQG--------LLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETVRQI 213 (306)
Q Consensus 142 s~~~~g--------~~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~i 213 (306)
|+|++| ++||+|||+|++.|+|+||++|+++.++++++++||+++|++|.++|+.+++. ..+.+++++|
T Consensus 164 a~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~---~~~~~~~~~I 240 (427)
T 3dwl_A 164 ALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEP---DSSLKTAERI 240 (427)
T ss_dssp HHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHTTC-----------CHHHHHH
T ss_pred HHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHHHHHHcCCC---chhHHHHHHH
Confidence 999998 68999999999999999999999999999999999999999999999998765 4578899999
Q ss_pred HHhccccccchHHHHhhcccCCcccceEEC--CCcc--EEEECCccccccccCCCCCCCCCCC-cccchhhhhcccccCC
Q 021885 214 KEKLCYISYDYKREYQLGLETTILVKNYTL--PDGR--VIKVGTERFQAPEALFTPVSLYFFS-VVFYPLKLTHAIHCSC 288 (306)
Q Consensus 214 Ke~~~~vs~d~~~~~~~~~~~~~~~~~y~l--Pdg~--~i~l~~er~~~~E~lF~P~~~g~~~-~~~~~~~~~~~~~~~~ 288 (306)
||++|||+.|+..+.+.........+.|.| |||+ .|+++.|||.+||+||+|+++|.+. .||++++.++|.+|++
T Consensus 241 Ke~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~ 320 (427)
T 3dwl_A 241 KEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPI 320 (427)
T ss_dssp HHHHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCH
T ss_pred HHhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCH
Confidence 999999999998887654332223567888 8997 8999999999999999999999994 8999999999999999
Q ss_pred Cchhhhhhc
Q 021885 289 STEHAIIST 297 (306)
Q Consensus 289 ~~~~~~~~~ 297 (306)
|-|++|+.+
T Consensus 321 dlr~~L~~n 329 (427)
T 3dwl_A 321 DVRKGLYKN 329 (427)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhCC
Confidence 988866654
No 3
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=2.5e-59 Score=438.30 Aligned_cols=297 Identities=58% Similarity=1.036 Sum_probs=135.2
Q ss_pred CCeEEEeCCCceEEEeecCCCCCCccCCceEEEeCccchhhhhcccCCceEeccccccccCCceeeceeecCeeechhhH
Q 021885 4 RNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDM 83 (306)
Q Consensus 4 ~~~vViD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~g~i~~~d~l 83 (306)
.++||||+||+++|+||+|++.|+.++||++++++.....+.++...+++++|+++...++.+.+.+|+++|++.|||.+
T Consensus 6 ~~~ivID~Gs~~~k~G~ag~~~P~~~~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~~~~~~~~~Pi~~G~i~dwd~~ 85 (394)
T 1k8k_B 6 RKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRSMLEVNYPMENGIVRNWDDM 85 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCEEEEECCCCeEEEeeCCCCCcceeccceeEEEcccccccccCCCCCCeEEChHHHhcCCCceeeccccCCEEecHHHH
Confidence 47899999999999999999999999999999876543210001123578999999888888899999999999999999
Q ss_pred HHHHHHHh-hcccCCCCCCCeeEEecCCCCCHHHHHHHHHHhhhhcCCceeeeehhhhHhhhhcCCCeEEEEecCCCceE
Q 021885 84 GQVWDHAF-FSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTH 162 (306)
Q Consensus 84 ~~ll~~~~-~~~L~~~~~~~~vll~e~~~~~~~~r~~l~e~lfE~~~v~~v~~~~~~~ls~~~~g~~tglVVDiG~~~t~ 162 (306)
+.+|+|+| ++.|++++.++|+++++|+++++..|++++|++||.|++|+++++.+++||+|++|+++|+|||+|++.|+
T Consensus 86 e~i~~~~~~~~~L~~~~~~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~~~lVVDiG~g~T~ 165 (394)
T 1k8k_B 86 KHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTH 165 (394)
T ss_dssp --------------------------------------------------------------------CCEEEECSSCEE
T ss_pred HHHHHHHhcccccCcCCCCCcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCceEEEEEcCCCceE
Confidence 99999999 88999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecceecccceEEecccchhHHHHHHHHHhhcCCccccCChHHHHHHHHHhccccccchHHHHhhcccCCcccceEE
Q 021885 163 VVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETVRQIKEKLCYISYDYKREYQLGLETTILVKNYT 242 (306)
Q Consensus 163 v~pV~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~iKe~~~~vs~d~~~~~~~~~~~~~~~~~y~ 242 (306)
|+||++|+++.+++.++++||+++|++|.++|+.+++++....+.+.++++|+++||++.|+..+.+.....+.....|+
T Consensus 166 v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~~~ 245 (394)
T 1k8k_B 166 ICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYT 245 (394)
T ss_dssp EECEETTEECSTTCEEESCCHHHHHHHHHHHHHHTTCCCCTTTTHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEE
T ss_pred eeeeECCEEcccceEEeeccHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhheeEecCHHHHHHhhccCCcCceEEE
Confidence 99999999999999999999999999999999999888876678999999999999999998777654433445567899
Q ss_pred CCCccEEEECCccccccccCCCCCCCCCCCcccchhhhhcccccCCCchhhhhhcCCCccee
Q 021885 243 LPDGRVIKVGTERFQAPEALFTPVSLYFFSVVFYPLKLTHAIHCSCSTEHAIISTLPDHFVL 304 (306)
Q Consensus 243 lPdg~~i~l~~er~~~~E~lF~P~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (306)
||||+.+.++.|||.+||.||+|+++|.+..|+++++.+++.+|+++-+.+|+ +|+||
T Consensus 246 lpdg~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~----~nIvL 303 (394)
T 1k8k_B 246 LPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFY----KHIVL 303 (394)
T ss_dssp CTTSCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHH----TTCEE
T ss_pred CCCCCEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHH----hCEEE
Confidence 99999999999999999999999999999999999999999999999888555 45554
No 4
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=1.8e-57 Score=423.31 Aligned_cols=297 Identities=45% Similarity=0.835 Sum_probs=265.3
Q ss_pred CCCCeEEEeCCCceEEEeecCCCCCCccCCceEEEeCccchhhhhcccCCceEeccccccccCCceeeceeecCeeechh
Q 021885 2 DNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWE 81 (306)
Q Consensus 2 ~~~~~vViD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~g~i~~~d 81 (306)
|+.++||||+||+++|+||+|++.|+.++||++++++...... +...+++++|+++...++...+.+|+++|++.|||
T Consensus 3 ~~~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~--~~~~~~~~vG~~a~~~~~~~~~~~Pi~~G~i~d~d 80 (375)
T 2fxu_A 3 DETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMV--GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 80 (375)
T ss_dssp -CCCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC---------CCEEHHHHHHHTTSEEEECSEETTEECCHH
T ss_pred CCCceEEEECCCCeEEEEECCCCCCceeecccccccccccccc--CCCCCCeEechhHhhcCcccceeccccCCcccCHH
Confidence 4678999999999999999999999999999999876543211 12235789999998888889999999999999999
Q ss_pred hHHHHHHHHhhcccCCCCCCCeeEEecCCCCCHHHHHHHHHHhhhhcCCceeeeehhhhHhhhhcCCCeEEEEecCCCce
Q 021885 82 DMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVT 161 (306)
Q Consensus 82 ~l~~ll~~~~~~~L~~~~~~~~vll~e~~~~~~~~r~~l~e~lfE~~~v~~v~~~~~~~ls~~~~g~~tglVVDiG~~~t 161 (306)
.++.+|+|+|.+.|++++.++++++++|+++++..|++++|++||.+++|+++++++++||+|++|+++|+|||+|++.|
T Consensus 81 ~~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~~~~lVvDiG~gtt 160 (375)
T 2fxu_A 81 DMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVT 160 (375)
T ss_dssp HHHHHHHHHHHTTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTCSSEEEEEECSSCE
T ss_pred HHHHHHHHHHHHhcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCCCeEEEEEcCCCce
Confidence 99999999998889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeecceecccceEEecccchhHHHHHHHHHhhcCCccccCChHHHHHHHHHhccccccchHHHHhhcccCCcccceE
Q 021885 162 HVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETVRQIKEKLCYISYDYKREYQLGLETTILVKNY 241 (306)
Q Consensus 162 ~v~pV~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~iKe~~~~vs~d~~~~~~~~~~~~~~~~~y 241 (306)
+|+||++|+++.+++.++++||+++|++|.++|+.+++++....+.+.++++|+++||++.|+..+.+.....+.....|
T Consensus 161 ~v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~ 240 (375)
T 2fxu_A 161 HNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY 240 (375)
T ss_dssp EEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEE
T ss_pred EEeEeECCEEeccceEEeccCHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEE
Confidence 99999999999999999999999999999999999887776555788999999999999999887765544344456789
Q ss_pred ECCCccEEEECCccccccccCCCCCCCCCCCcccchhhhhcccccCCCchhhhhhcCCCccee
Q 021885 242 TLPDGRVIKVGTERFQAPEALFTPVSLYFFSVVFYPLKLTHAIHCSCSTEHAIISTLPDHFVL 304 (306)
Q Consensus 242 ~lPdg~~i~l~~er~~~~E~lF~P~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (306)
.||||+.+.++.|||.+||.||+|+++|.+..|+++++.+++.+|+++-+. .+.+|+||
T Consensus 241 ~lpdg~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~----~l~~~IvL 299 (375)
T 2fxu_A 241 ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRK----DLYANNVM 299 (375)
T ss_dssp ECTTSCEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHH----HHHTCEEE
T ss_pred ECCCCCEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHH----HHHhCcEe
Confidence 999999999999999999999999999999999999999999999988777 45556665
No 5
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.9e-55 Score=432.17 Aligned_cols=296 Identities=21% Similarity=0.317 Sum_probs=220.0
Q ss_pred CCeEEEeCCCceEEEeecCCCCCCccCCceEEEeCccchhhh--------------------------------------
Q 021885 4 RNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESL-------------------------------------- 45 (306)
Q Consensus 4 ~~~vViD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~-------------------------------------- 45 (306)
+++||||+||+++|||||||+.|+.+ |+++|++........
T Consensus 15 ~~iIVIdpGS~~~riG~A~d~~P~~i-P~~iar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (593)
T 4fo0_A 15 NFIIVIHPGSTTLRIGRATDTLPASI-PHVIARRHKQQGQPLYKDSWLLREGLNKPESNEQRQNGLKMVDQAIWSKKMSN 93 (593)
T ss_dssp GGEEEEECCSSEEEEEETTCSSCEEE-ECCEEEECSSTTCCCCBCCSSCCTTTTSTTHHHHHHHHHHHHHHHHHHSCCTT
T ss_pred CCEEEEeCCCCCeEeeecCCCCCCee-eEEEEEECCCCCCCcccccccccccccccchhhhhhhhHHHHHHHHHHHhhhc
Confidence 56899999999999999999999865 999998653211000
Q ss_pred ---------------------------------hcccCCceEecccccc--ccCCceeeceeecC-----------eeec
Q 021885 46 ---------------------------------MEQELKDTIVGAAALD--LRHQLDVSYPVNNG-----------IVQN 79 (306)
Q Consensus 46 ---------------------------------~~~~~~~~~~g~~~~~--~~~~~~~~~p~~~g-----------~i~~ 79 (306)
.....+++++|++|+. .++.+.++|||++| ++.+
T Consensus 94 ~~r~~~~s~~~~~~~n~~~~p~~i~~~~~~~~~~~~~~~~~~vG~~al~~~~~~~~~l~~Pi~~G~~n~~~~~~~s~~~~ 173 (593)
T 4fo0_A 94 GTRRIPVSPEQARSYNKQMRPAILDHCSGNKWTNTSHHPEYLVGEEALYVNPLDCYNIHWPIRRGQLNIHPGPGGSLTAV 173 (593)
T ss_dssp SCCCCCCCHHHHHHHHTTCCCEEEESSCSCCCCCCTTCCSEEETHHHHTSCTTSSEEEECSEETTEECCCSSTTCSHHHH
T ss_pred ccccCCCcHHHhhhhhccCCCcccCCCCccccccccccccccccHHHhhcCCcccceEecCcccCccccccCCccchhcC
Confidence 0012347899999975 46779999999999 5789
Q ss_pred hhhHHHHHHHHhhcccCCCCCC---CeeEEecCCCCCHHHHHHHHHHhhhhcCCceeeeehhhhHhhhhcCCCeEEEEec
Q 021885 80 WEDMGQVWDHAFFSELKIDPPE---CKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDS 156 (306)
Q Consensus 80 ~d~l~~ll~~~~~~~L~~~~~~---~~vll~e~~~~~~~~r~~l~e~lfE~~~v~~v~~~~~~~ls~~~~g~~tglVVDi 156 (306)
||++|++|+|+|.++|++++++ ||+||++|+++++..|++|+|+|||+|+||+++++.+++||+||+|++||||||+
T Consensus 174 wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~tglVVDi 253 (593)
T 4fo0_A 174 LADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLSSTCIVDV 253 (593)
T ss_dssp HHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCCceEEEEe
Confidence 9999999999999999998765 9999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEeecceecccceEEecccchhHHHHHHHHHhhcCCcccc-----CChHHHHHHHHHhccccccchHHHHhhc
Q 021885 157 GDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNR-----TADFETVRQIKEKLCYISYDYKREYQLG 231 (306)
Q Consensus 157 G~~~t~v~pV~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~-----~~~~~~~~~iKe~~~~vs~d~~~~~~~~ 231 (306)
|++.|+|+||+||+++.++++++++||++||++|.++|+.+++++.. ..+.++++++||++|||+.|+..+....
T Consensus 254 G~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~d~~~v~~iKe~~c~v~~d~~~~~~~~ 333 (593)
T 4fo0_A 254 GDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQLTNKMDCLLLQHLKETFCHLDQDISGLQDHE 333 (593)
T ss_dssp CSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHHHHHHHHTTCSCTTCCTTCHHHHHHHHHHHHHHCBCCTTCCSCEEEE
T ss_pred CCCceeeeeeECCEEehhheEEecccHHHHHHHHHHHHHhcCCCccccccccchhHHHHHHHHHHhcccccchHHhhhhh
Confidence 99999999999999999999999999999999999999999877642 3467899999999999998754221000
Q ss_pred -----------------------------------------------------------------------ccCCcccce
Q 021885 232 -----------------------------------------------------------------------LETTILVKN 240 (306)
Q Consensus 232 -----------------------------------------------------------------------~~~~~~~~~ 240 (306)
.........
T Consensus 334 ~~~~~p~~~~~~~~~~~~~E~~~~p~~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (593)
T 4fo0_A 334 FQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGIVGQKMTTLQHRSQGDPEDPHDEHYLLATQSKQEQSAKATADRKS 413 (593)
T ss_dssp EEECCTTSCEEEEEEEECTHHHHHHHTTTSGGGGCCCSSCCEEECC----------------------------------
T ss_pred hhcccCCCCceeeEEeccchhhcCchhhcChhhhcccccccchhhhhcccCcccchhhhhhhhcccchhhhhhccccccc
Confidence 001123457
Q ss_pred EECCCccEEEECCccccccccCCCCCCC--------------------------------CCCCcccchhhhhcccccC-
Q 021885 241 YTLPDGRVIKVGTERFQAPEALFTPVSL--------------------------------YFFSVVFYPLKLTHAIHCS- 287 (306)
Q Consensus 241 y~lPdg~~i~l~~er~~~~E~lF~P~~~--------------------------------g~~~~~~~~~~~~~~~~~~- 287 (306)
|.+|||..+.++.+|+.+||.||+|+.. +.+..||+..|.+||.+|+
T Consensus 414 ~~~p~g~~~~~~~e~~~~pe~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gL~~aI~~SI~~~~~ 493 (593)
T 4fo0_A 414 ASKPIGFEGDLRGQSSDLPERLHSQEVDLGSAQGDGLMAGNDSEEALTALMSRKTAISLFEGKALGLDKAILHSIDCCSS 493 (593)
T ss_dssp ---------------------------------------------------------CHHHHSCCCHHHHHHHHHHTCSS
T ss_pred ccCCCCcccccccccccCchhccCcccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhCCc
Confidence 8899999999999999999999999642 3456799999999999998
Q ss_pred CCchhhhhhcCCCccee
Q 021885 288 CSTEHAIISTLPDHFVL 304 (306)
Q Consensus 288 ~~~~~~~~~~~~~~~~~ 304 (306)
+|-|++| ..|+||
T Consensus 494 ~D~r~~L----~~NIvl 506 (593)
T 4fo0_A 494 DDTKKKM----YSSILV 506 (593)
T ss_dssp HHHHHHH----HHEEEE
T ss_pred HHHHHHH----hCCEEE
Confidence 5777754 455554
No 6
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=6.8e-52 Score=390.85 Aligned_cols=296 Identities=33% Similarity=0.543 Sum_probs=257.3
Q ss_pred CCCeEEEeCCCceEEEeecCCCCCCccCCceEEEeCccchhh------hhcccCCceEeccccccccCCceeeceeecCe
Q 021885 3 NRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEES------LMEQELKDTIVGAAALDLRHQLDVSYPVNNGI 76 (306)
Q Consensus 3 ~~~~vViD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~g~ 76 (306)
..++||||+||+++|+||+|++.|+.++||++++++...... ..+...+++++|+++...+ .+.+.+|+++|+
T Consensus 4 ~~~~ivID~Gs~~~k~G~~~~~~p~~~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~~-~~~~~~pi~~G~ 82 (418)
T 1k8k_A 4 RLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKP-TYATKWPIRHGI 82 (418)
T ss_dssp CSCCEEEEECSSEEEEEETTCSSCSEEEESCEEECC-----------CCCTTGGGCEEEGGGGTSCT-TSEEECCEETTE
T ss_pred CCCeEEEECCCCeEEEeeCCCCCCCCcCCceEEEECcccccccccccccccccccCeEEChHHHhcC-CCEEeccccCCE
Confidence 568999999999999999999999999999999876532100 0011223689999998776 488999999999
Q ss_pred eechhhHHHHHHHHhhcccCCCCCCCeeEEecCCCCCHHHHHHHHHHhhhhcCCceeeeehhhhHhhhh---------cC
Q 021885 77 VQNWEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYA---------QG 147 (306)
Q Consensus 77 i~~~d~l~~ll~~~~~~~L~~~~~~~~vll~e~~~~~~~~r~~l~e~lfE~~~v~~v~~~~~~~ls~~~---------~g 147 (306)
+.|||.++.+|+|+|.+.|+++++++++++++|++++...|+++.|++||.+++++++++.+|+||+|+ .+
T Consensus 83 i~d~d~~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~ 162 (418)
T 1k8k_A 83 VEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERT 162 (418)
T ss_dssp ESCHHHHHHHHHHHHHTTTCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCC
T ss_pred ECCHHHHHHHHHHHHHhccCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCC
Confidence 999999999999999778999999999999999999999999999999999999999999999999999 56
Q ss_pred CCeEEEEecCCCceEEEEeecceecccceEEecccchhHHHHHHHHHhhcCCccccCChHHHHHHHHHhccccccchHHH
Q 021885 148 LLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETVRQIKEKLCYISYDYKRE 227 (306)
Q Consensus 148 ~~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~iKe~~~~vs~d~~~~ 227 (306)
+ +|+|||+|++.|+|+||.+|+++.+++.++++||+++|++|.++|.++++.+....+.+.++++|+++||++.|+..+
T Consensus 163 ~-~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e 241 (418)
T 1k8k_A 163 L-TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKE 241 (418)
T ss_dssp C-CEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHHHTTCCCCCGGGHHHHHHHHHHHHCCCCSCHHHH
T ss_pred C-eEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhchhcccHHHH
Confidence 6 999999999999999999999999999999999999999999999998877765668899999999999999998776
Q ss_pred Hhhccc-CCcccceEECCCcc-----EEEECCccccccccCCCCCCCCCCC-cccchhhhhcccccCCCchhhhhhcCCC
Q 021885 228 YQLGLE-TTILVKNYTLPDGR-----VIKVGTERFQAPEALFTPVSLYFFS-VVFYPLKLTHAIHCSCSTEHAIISTLPD 300 (306)
Q Consensus 228 ~~~~~~-~~~~~~~y~lPdg~-----~i~l~~er~~~~E~lF~P~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (306)
.+.... .......|.+||+. .+.++.|||.+||.||+|+++|.+. .|+++++.+++.+|+++-+.+++.
T Consensus 242 ~~~~~~~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~---- 317 (418)
T 1k8k_A 242 FNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYK---- 317 (418)
T ss_dssp HHHHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHH----
T ss_pred HHhhcccccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHh----
Confidence 543221 12234689999998 8999999999999999999999886 799999999999999988886554
Q ss_pred ccee
Q 021885 301 HFVL 304 (306)
Q Consensus 301 ~~~~ 304 (306)
|+||
T Consensus 318 ~IvL 321 (418)
T 1k8k_A 318 NIVL 321 (418)
T ss_dssp CEEE
T ss_pred ceEE
Confidence 5555
No 7
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=100.00 E-value=6.8e-49 Score=377.09 Aligned_cols=264 Identities=20% Similarity=0.320 Sum_probs=223.5
Q ss_pred CCCCCeEEEeCCCceEEEeecCCCCCCccCCceEEEeCccch----------------------------------hh--
Q 021885 1 MDNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYE----------------------------------ES-- 44 (306)
Q Consensus 1 ~~~~~~vViD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~----------------------------------~~-- 44 (306)
++++++|||+.||.++|+|+|.|..|..+ |.+++++..... ++
T Consensus 37 ~~~~~~IVIHpGS~~lRIG~AsD~~P~~i-p~~iA~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~k~rmr~~ 115 (655)
T 4am6_A 37 NDPTATIVIHPGSNSIKIGFPKDDHPVVV-PNCVAVPKKWLDLENSEHVENVCLQREQSEEFNNIKSEMEKNFRERMRYY 115 (655)
T ss_dssp CCGGGEEEEECCSSEEEEECTTSSSCEEE-ESCEEEEGGGSCCSSSCCCCTTCCCSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEcCCCcceeeeecCCCCCccc-ceeEEeccccccCCCccccCccccchhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 45788999999999999999999999965 899986531100 00
Q ss_pred -----h---------------------hcc-------cCCceEecccccc-ccCCceeeceeecCeee----c-------
Q 021885 45 -----L---------------------MEQ-------ELKDTIVGAAALD-LRHQLDVSYPVNNGIVQ----N------- 79 (306)
Q Consensus 45 -----~---------------------~~~-------~~~~~~~g~~~~~-~~~~~~~~~p~~~g~i~----~------- 79 (306)
+ .+. ..+++++|++|.. .++.+.+++|+++|+|. |
T Consensus 116 k~r~~pn~~e~~~~fN~~~~Pe~i~~~nDp~~~~W~~~~~d~~VGdEA~~~~r~~l~l~~PI~~GvI~~~s~Dy~s~q~~ 195 (655)
T 4am6_A 116 KRKVPGNAHEQVVSFNENSKPEIISEKNDPSPIEWIFDDSKLYYGSDALRCVDEKFVIRKPFRGGSFNVKSPYYKSLAEL 195 (655)
T ss_dssp SCCCSTTCCSSTTCCEEEECSCCCCSSSSCCSCCCBCCTTSCEEHHHHHTBCTTTEEEECSEETTEECTTCSSCSSHHHH
T ss_pred CCCCCCCCHHHHHHhcCCCCCeECCCCCCccccccccCCCCEEEehHHhhCCccCeEEeccccCCEecccCCcccccccc
Confidence 0 000 0147889999987 57889999999999998 8
Q ss_pred hhhHHHHHHHHhh-cccCCCCC---CCeeEEecCCCCCHHHHHHHHHHhhhhcCCceeeeehhhhHhhhhcC-CCeEEEE
Q 021885 80 WEDMGQVWDHAFF-SELKIDPP---ECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQG-LLTGLVI 154 (306)
Q Consensus 80 ~d~l~~ll~~~~~-~~L~~~~~---~~~vll~e~~~~~~~~r~~l~e~lfE~~~v~~v~~~~~~~ls~~~~g-~~tglVV 154 (306)
||.++++|+|+|. ++|+++++ ++|+|+++|+++++..|++++|+|||+|++|+++++.+++||+||+| +++|+||
T Consensus 196 WD~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl~ttGLVV 275 (655)
T 4am6_A 196 ISDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGISTSTCVV 275 (655)
T ss_dssp HHHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCCSSCEEEE
T ss_pred HHHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCCCCceEEE
Confidence 9999999999997 38999986 89999999999999999999999999999999999999999999999 7999999
Q ss_pred ecCCCceEEEEeecceecccceEEecccchhHHHHHHHHHhhcCC-----ccccCChHHHHHHHHHhcccc-ccchHHHH
Q 021885 155 DSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGY-----SMNRTADFETVRQIKEKLCYI-SYDYKREY 228 (306)
Q Consensus 155 DiG~~~t~v~pV~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~-----~~~~~~~~~~~~~iKe~~~~v-s~d~~~~~ 228 (306)
|+|++.|+|+||++|+++.++++++++||+++|++|.++|+++++ .++...+.+++++|||++||| ..|+..+
T Consensus 276 DiG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t~~e~eiVrdIKEk~CyVs~~Di~~q- 354 (655)
T 4am6_A 276 NIGAAETRIACVDEGTVLEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDSKHGWLLAERLKKNFTTFQDADVAVQ- 354 (655)
T ss_dssp EECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTSHHHHHHHHHHHHHHCCCCGGGCCSE-
T ss_pred cCCCceEEEEEEeCCEEEhhheeeecchHHHHHHHHHHHHHHcCCCccccCCCCcchHHHHHHHHHheEEEcccchhhh-
Confidence 999999999999999999999999999999999999999999987 345566899999999999999 5554211
Q ss_pred hhcccCCcccceEECCCc----cEEEECCccccccccCCCCCCCCCCCc
Q 021885 229 QLGLETTILVKNYTLPDG----RVIKVGTERFQAPEALFTPVSLYFFSV 273 (306)
Q Consensus 229 ~~~~~~~~~~~~y~lPdg----~~i~l~~er~~~~E~lF~P~~~g~~~~ 273 (306)
........|++ ..++++.|||.+||+||+|+++|+.+.
T Consensus 355 -------~~~f~~r~P~~~~~ky~i~vgdErflaPe~lF~Pei~~~~~~ 396 (655)
T 4am6_A 355 -------LYNFMNRSPNQPTEKYEFKLFDEVMLAPLALFFPQIFKLIRT 396 (655)
T ss_dssp -------EEEEEECCSSSCEEEEEEEESSHHHHHHHGGGSTHHHHHTSC
T ss_pred -------hhcceeccCCCCCcceEEEECCeehhCchhcCChhhcccccc
Confidence 11112233553 368999999999999999999887754
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.93 E-value=3.1e-25 Score=203.40 Aligned_cols=260 Identities=14% Similarity=0.110 Sum_probs=196.1
Q ss_pred CCeEEEeCCCceEEEeecCCCCCCccCCceEEEeCccchhhhhcccCCceEecccccccc----CCceeeceeecCeeec
Q 021885 4 RNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLR----HQLDVSYPVNNGIVQN 79 (306)
Q Consensus 4 ~~~vViD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~p~~~g~i~~ 79 (306)
+.+|+||+||.++++|++++. |...+||+++..... .+.+++|++|.... ....+.+|+++|.+.+
T Consensus 3 ~~~igIDlGT~~s~v~~~~~~-~~~~~PS~v~~~~~~---------~~~~~vG~~A~~~~~~~~~~~~~~~p~~~g~i~~ 72 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLRGKG-IVVNEPSVIAIDSTT---------GEILKVGLEAKNMIGKTPATIKAIRPMRDGVIAD 72 (344)
T ss_dssp -CEEEEEECSSEEEEEETTTE-EEEEEESCEEEETTT---------CCEEEESHHHHTTTTCCCTTEEEECCEETTEESS
T ss_pred CceEEEEcCcCcEEEEECCCC-EEEeeCcEEEEecCC---------CcEEEEcHHHHHhcccCCCCeEEEecCCCCeeCC
Confidence 478999999999999999875 767789999875321 12468999986542 3456789999999999
Q ss_pred hhhHHHHHHHHhhcccCCC-CCCCeeEEecCCCCCHHHHHHHHHHhhhhcCCceeeeehhhhHhhhhcCC-----CeEEE
Q 021885 80 WEDMGQVWDHAFFSELKID-PPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGL-----LTGLV 153 (306)
Q Consensus 80 ~d~l~~ll~~~~~~~L~~~-~~~~~vll~e~~~~~~~~r~~l~e~lfE~~~v~~v~~~~~~~ls~~~~g~-----~tglV 153 (306)
|+..+.+|.+++.+..... ..+.+++++.|..++...|+.+.+ ++|..|++.+.++.+|+||+++++. .+.+|
T Consensus 73 ~~~~~~i~~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~~~~-a~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lV 151 (344)
T 1jce_A 73 YTVALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILD-AGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMV 151 (344)
T ss_dssp HHHHHHHHHHHHHHHHTSCCSCCCEEEEEECTTCCHHHHHHHHH-HHHHTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEE
T ss_pred hHHHHHHHHHHHHHHhhccccCCCeEEEEECCCCCHHHHHHHHH-HHHHcCCCeEeccCCHHHHHHhcCCCCCCCceEEE
Confidence 9999999999994322212 446899999999999999999988 5799999999999999999999986 68999
Q ss_pred EecCCCceEEEEeecceecccceEEecccchhHHHHHHHHHhhcCCccccCChHHHHHHHHHhccccccchHHHHhhccc
Q 021885 154 IDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETVRQIKEKLCYISYDYKREYQLGLE 233 (306)
Q Consensus 154 VDiG~~~t~v~pV~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~iKe~~~~vs~d~~~~~~~~~~ 233 (306)
||+|++.|+++++..|.++. ....++||+++|+.|.+.+.++ +. ...+...++++|+++|+...+...+...
T Consensus 152 vDiGggttdvsv~~~~~~~~--~~~~~lGG~~id~~l~~~l~~~-~~--~~~~~~~ae~~K~~l~~~~~~~~~~~~~--- 223 (344)
T 1jce_A 152 VDIGGGTTEVAVISLGSIVT--WESIRIAGDEMDEAIVQYVRET-YR--VAIGERTAERVKIEIGNVFPSKENDELE--- 223 (344)
T ss_dssp EEECSSCEEEEEEETTEEEE--EEEESCSHHHHHHHHHHHHHHH-HC--EECCHHHHHHHHHHHCBCSCCHHHHHCE---
T ss_pred EEeCCCeEEEEEEEcCCEEe--eCCCCccChhHHHHHHHHHHHH-hC--cccCHHHHHHHHHHHhccCccccCCcce---
Confidence 99999999999999998774 4678999999999999999865 11 1235788999999999887654321100
Q ss_pred CCcccceEECCCcc--EEEECCccccccccCCCCCCCCCCCcccchhhhhcccccCCCchh
Q 021885 234 TTILVKNYTLPDGR--VIKVGTERFQAPEALFTPVSLYFFSVVFYPLKLTHAIHCSCSTEH 292 (306)
Q Consensus 234 ~~~~~~~y~lPdg~--~i~l~~er~~~~E~lF~P~~~g~~~~~~~~~~~~~~~~~~~~~~~ 292 (306)
.......+.+|. .+.++.++|. .+|+|.+ .++..++.+.+.+|+.+-+.
T Consensus 224 --~~~~~~~~~~g~~~~~~i~~~~~~---~~~~~~~-----~~i~~~i~~~l~~~~~~~~~ 274 (344)
T 1jce_A 224 --TTVSGIDLSTGLPRKLTLKGGEVR---EALRSVV-----VAIVESVRTTLEKTPPELVS 274 (344)
T ss_dssp --EEEEEEETTTTEEEEEEEEHHHHH---HHTHHHH-----HHHHHHHHHHHHTSCHHHHH
T ss_pred --EEEeccccCCCCceeEEEeHHHHH---HHHHHHH-----HHHHHHHHHHHHhCCchhcc
Confidence 000011233664 5677777765 4566643 24556777777777654333
No 9
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.62 E-value=7.3e-15 Score=129.79 Aligned_cols=168 Identities=19% Similarity=0.190 Sum_probs=127.9
Q ss_pred CeEEEeCCCceEEEeecCCCCCCccCCceEEEeCccchhhhhcccCCceEeccccccccCCceeeceeecCeeechhhHH
Q 021885 5 NVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLMEQELKDTIVGAAALDLRHQLDVSYPVNNGIVQNWEDMG 84 (306)
Q Consensus 5 ~~vViD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~g~i~~~d~l~ 84 (306)
-.++||+||.++|+....++. ..++.. ..-..|+++|.+.||+..+
T Consensus 29 ~~~gIDiGS~s~k~vi~~~~~------~~l~~~----------------------------~~~~~~l~~g~i~d~~~~~ 74 (272)
T 3h1q_A 29 YKVGVDLGTADIVLVVTDQEG------IPVAGA----------------------------LKWASVVKDGLVVDYIGAI 74 (272)
T ss_dssp CEEEEECCSSEEEEEEECTTC------CEEEEE----------------------------EEECCCCBTTBCTTHHHHH
T ss_pred EEEEEEcccceEEEEEECCCC------cEEEEE----------------------------eecccccCCCEEEcHHHHH
Confidence 478999999999998843221 112211 0123588999999999999
Q ss_pred HHHHHHhhcccCC-CCCCCeeEEecCCCCCHHHHHHHHHHhhhhcCCceeeeehhhhHhhhhcCCCeEEEEecCCCceEE
Q 021885 85 QVWDHAFFSELKI-DPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHV 163 (306)
Q Consensus 85 ~ll~~~~~~~L~~-~~~~~~vll~e~~~~~~~~r~~l~e~lfE~~~v~~v~~~~~~~ls~~~~g~~tglVVDiG~~~t~v 163 (306)
.+|++++...... ......++++.|....... ++.++.+++.+|++...+..++.++++++|..+++|||+|++.|.+
T Consensus 75 ~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~-~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~~~~viDiGggst~~ 153 (272)
T 3h1q_A 75 QIVRELKAKVERLLGSELFQAATAIPPGTVGRN-AEACGHVVAGAGLELVTLVDEPVAAARALGINDGIVVDIGGGTTGI 153 (272)
T ss_dssp HHHHHHHHHHHHHSSSCCCEEEEECCSCC---C-TTHHHHHHHHTTCEEEEEECHHHHHHHHHTCSSEEEEEECSSCEEE
T ss_pred HHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHH-HHHHHHHHHHcCCeeeecccHHHHHHHHHcCCCEEEEEECCCcEEE
Confidence 9999998533222 2223456677776555444 4456668999999999999999999999999999999999999999
Q ss_pred EEeecceecccceEEecccchhHHHHHHHHHhhcCCccccCChHHHHHHHHHhcc
Q 021885 164 VPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETVRQIKEKLC 218 (306)
Q Consensus 164 ~pV~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~iKe~~~ 218 (306)
+++.+|.++. ....++||..+++.+.+.+. .+.+.++++|++++
T Consensus 154 ~~~~~g~~~~--~~~~~~Gg~~~~~~l~~~l~---------~~~~~ae~~k~~~~ 197 (272)
T 3h1q_A 154 AVIEKGKITA--TFDEPTGGTHLSLVLAGSYK---------IPFEEAETIKKDFS 197 (272)
T ss_dssp EEEETTEEEE--ECCBSCCHHHHHHHHHHHHT---------CCHHHHHHHHHSST
T ss_pred EEEECCEEEE--EecCCCcHHHHHHHHHHHhC---------CCHHHHHHHHHhcC
Confidence 9999999873 36779999999999988875 24677888888766
No 10
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.55 E-value=2.1e-14 Score=138.13 Aligned_cols=199 Identities=18% Similarity=0.193 Sum_probs=140.6
Q ss_pred CeEEEeCCCceEEEeecCCCCCCcc--------CCceEEEeCccchhhhhcccCCceEecccccccc--CCc---eee--
Q 021885 5 NVVVCDNGTGYVKCGFAGENFPNSV--------FPCVVGRPMLRYEESLMEQELKDTIVGAAALDLR--HQL---DVS-- 69 (306)
Q Consensus 5 ~~vViD~Gs~~~k~G~ag~~~P~~~--------~ps~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~---~~~-- 69 (306)
.+|.||+||.+++++++.+..|..+ +||+++.. . ...++|+++.... ... .++
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~-~-----------~~~~vG~~A~~~~~~~p~~~~~~Kr~ 70 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFK-N-----------GERLVGEVAKRQAITNPNTIISIKRH 70 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEES-S-----------SSEEESHHHHTTTTTCSSEEECGGGT
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEEC-C-----------CcEEECHHHHHhHHhCCCcHHHHHHh
Confidence 6899999999999999988777766 78888762 1 2467888775421 111 111
Q ss_pred --ceee---cCeeechhhHHHHHHHHhhcccC------CCCCCCeeEEecCCCCCHHHHHHHHHHhhhhcCCceeeeehh
Q 021885 70 --YPVN---NGIVQNWEDMGQVWDHAFFSELK------IDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQ 138 (306)
Q Consensus 70 --~p~~---~g~i~~~d~l~~ll~~~~~~~L~------~~~~~~~vll~e~~~~~~~~r~~l~e~lfE~~~v~~v~~~~~ 138 (306)
.|++ +|. +|. .+.++.+++ ++|. +......++++.|..++..+|+.+.+. ++..|++.+.++.+
T Consensus 71 lg~p~~~~~~g~--~~~-~~ei~a~~L-~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a-~~~AGl~~~~li~E 145 (509)
T 2v7y_A 71 MGTDYKVEIEGK--QYT-PQEISAIIL-QYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDA-GRIAGLEVERIINE 145 (509)
T ss_dssp TTSCCCEEETTE--EEC-HHHHHHHHH-HHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEH
T ss_pred cCCCcEEEECCE--EEc-HHHHHHHHH-HHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEecC
Confidence 1554 564 444 455555555 2222 122347899999999999999998885 58899999999999
Q ss_pred hhHhhhhcCC-----CeEEEEecCCCceEEEEee--ccee-cccceEEecccchhHHHHHHHHHhhc-----CCccccC-
Q 021885 139 AVLTLYAQGL-----LTGLVIDSGDGVTHVVPVV--DGYS-FPHLTKRMNVAGRHITSYLVDLLSRR-----GYSMNRT- 204 (306)
Q Consensus 139 ~~ls~~~~g~-----~tglVVDiG~~~t~v~pV~--dG~~-~~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~- 204 (306)
|.||++++|. .+.+|+|+|++.|.++.+. +|.. +.......++||.++++.|.+.+.++ +.++...
T Consensus 146 p~AAAlay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~ 225 (509)
T 2v7y_A 146 PTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDK 225 (509)
T ss_dssp HHHHHHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCGGGCH
T ss_pred HHHHHHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCcccCH
Confidence 9999999886 4789999999999999775 3543 22223446899999999999888654 3333211
Q ss_pred ----ChHHHHHHHHHhcccc
Q 021885 205 ----ADFETVRQIKEKLCYI 220 (306)
Q Consensus 205 ----~~~~~~~~iKe~~~~v 220 (306)
.-...++++|+.++..
T Consensus 226 ~~~~~l~~~aE~~K~~ls~~ 245 (509)
T 2v7y_A 226 MALQRLKDAAEKAKKELSGV 245 (509)
T ss_dssp HHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHhcCCC
Confidence 1236778888887753
No 11
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.38 E-value=8.8e-12 Score=115.35 Aligned_cols=119 Identities=17% Similarity=0.107 Sum_probs=91.3
Q ss_pred CCeeEEecCCCCCHHHHHHHHHHhhhhcCCceeeeehhhhHhhhhcCCC------eEEEEecCCCceEEEEeecc-----
Q 021885 101 ECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLL------TGLVIDSGDGVTHVVPVVDG----- 169 (306)
Q Consensus 101 ~~~vll~e~~~~~~~~r~~l~e~lfE~~~v~~v~~~~~~~ls~~~~g~~------tglVVDiG~~~t~v~pV~dG----- 169 (306)
...++++.|..++...|+.+.+. ++..|++.+.++.+|+|++++++.. +.+|+|+|++.|+++.+..+
T Consensus 135 ~~~~vitvP~~~~~~~r~~~~~a-~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~ 213 (383)
T 1dkg_D 135 VTEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGE 213 (383)
T ss_dssp CCEEEECBCTTCCHHHHHHHHHH-HHHTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----
T ss_pred CCeEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCC
Confidence 45789999999999999988886 5889999999999999999988753 68999999999999987654
Q ss_pred -eecc-cceEEecccchhHHHHHHHHHhhc-----CCccccC-----ChHHHHHHHHHhcccc
Q 021885 170 -YSFP-HLTKRMNVAGRHITSYLVDLLSRR-----GYSMNRT-----ADFETVRQIKEKLCYI 220 (306)
Q Consensus 170 -~~~~-~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~-----~~~~~~~~iKe~~~~v 220 (306)
.... ......++||+++|+.|.+.+.++ +.++... .-...++++|+.++..
T Consensus 214 ~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~ 276 (383)
T 1dkg_D 214 KTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSA 276 (383)
T ss_dssp CCCEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSS
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCC
Confidence 2211 122346899999999999888664 3333211 1246788889888764
No 12
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.37 E-value=2.5e-12 Score=119.32 Aligned_cols=96 Identities=17% Similarity=0.137 Sum_probs=76.8
Q ss_pred CCCeeEEecCCCCCHHHHHHHHHHhhhhcCCceeeeehhhhHhhhhcCCCe------EEEEecCCCceEEEEee--ccee
Q 021885 100 PECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLLT------GLVIDSGDGVTHVVPVV--DGYS 171 (306)
Q Consensus 100 ~~~~vll~e~~~~~~~~r~~l~e~lfE~~~v~~v~~~~~~~ls~~~~g~~t------glVVDiG~~~t~v~pV~--dG~~ 171 (306)
.-..++++.|..++...|+.+.+.+ +..|++.+.++.+|.|++++++... -+|+|+|++.|.++.+. ++..
T Consensus 152 ~~~~~vitvP~~~~~~~r~~~~~a~-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~ 230 (394)
T 3qfu_A 152 KVTHAVVTVPAYFNDAQRQATKDAG-TIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVF 230 (394)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEE
T ss_pred CcceEEEEECCCCCHHHHHHHHHHH-HHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEE
Confidence 3468999999999999999887776 8899999999999999999987543 49999999999887774 3332
Q ss_pred cccc-eEEecccchhHHHHHHHHHhh
Q 021885 172 FPHL-TKRMNVAGRHITSYLVDLLSR 196 (306)
Q Consensus 172 ~~~~-~~~~~~GG~~l~~~l~~~l~~ 196 (306)
-..+ ....++||.++++.|.+.+..
T Consensus 231 ~~~~~~~~~~lGG~~~d~~l~~~l~~ 256 (394)
T 3qfu_A 231 EVQATSGDTHLGGEDFDYKIVRQLIK 256 (394)
T ss_dssp EEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCChHHHHHHHHHHHHH
Confidence 2222 233689999999999888853
No 13
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.24 E-value=4.4e-11 Score=111.40 Aligned_cols=95 Identities=18% Similarity=0.186 Sum_probs=76.5
Q ss_pred CCeeEEecCCCCCHHHHHHHHHHhhhhcCCceeeeehhhhHhhhhcCCC---------eEEEEecCCCceEEEEee--cc
Q 021885 101 ECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLL---------TGLVIDSGDGVTHVVPVV--DG 169 (306)
Q Consensus 101 ~~~vll~e~~~~~~~~r~~l~e~lfE~~~v~~v~~~~~~~ls~~~~g~~---------tglVVDiG~~~t~v~pV~--dG 169 (306)
-..++++.|..++...|+.+.+. ++..|++.+.++.+|.||+++++.. +-+|+|+|++.|.++.+. +|
T Consensus 158 ~~~~vitvPa~~~~~~r~~~~~a-~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~ 236 (404)
T 3i33_A 158 VHSAVITVPAYFNDSQRQATKDA-GTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDG 236 (404)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHH-HHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETT
T ss_pred CCcEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCC
Confidence 46799999999999999888776 7889999999999999999988653 349999999999998774 33
Q ss_pred ee-cccceEEecccchhHHHHHHHHHhh
Q 021885 170 YS-FPHLTKRMNVAGRHITSYLVDLLSR 196 (306)
Q Consensus 170 ~~-~~~~~~~~~~GG~~l~~~l~~~l~~ 196 (306)
.. +.......++||.++++.|.+.+..
T Consensus 237 ~~~v~~~~~~~~lGG~~~d~~l~~~l~~ 264 (404)
T 3i33_A 237 IFEVKSTAGDTHLGGEDFDNRMVSHLAE 264 (404)
T ss_dssp EEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 32 2222334689999999999888843
No 14
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.22 E-value=4.8e-11 Score=109.15 Aligned_cols=180 Identities=17% Similarity=0.105 Sum_probs=128.3
Q ss_pred CeEEEeCCCceEEEeecCCCCCCccCCceEEEeCccchhhhh-----c--c------cCCceEeccccccccCCceeece
Q 021885 5 NVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYEESLM-----E--Q------ELKDTIVGAAALDLRHQLDVSYP 71 (306)
Q Consensus 5 ~~vViD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~-----~--~------~~~~~~~g~~~~~~~~~~~~~~p 71 (306)
-.+-||+|+.++|+-. ++ .-...+||+++........ .+ . . ..+.+.+|+++. +|
T Consensus 22 ~~igiDlG~~~tkv~~-~~-g~~~~~PSvva~~~~~~~~-~~~~~~v~~~~g~~~~~~~~~~~vG~~A~---------~~ 89 (346)
T 2fsj_A 22 VVVGLDVGYGDTKVIG-VD-GKRIIFPSRWAVTETESWG-IGGKIPVLSTDGGQTKFIYGKYASGNNIR---------VP 89 (346)
T ss_dssp EEEEEEECSSEEEEEC-GG-GCEEEEESCEEEECCSCC-----CCCCBBSSTTSSEEEEGGGCCSSCCB---------CC
T ss_pred EEEEEecCCcceeEEe-cC-CCEEEecceeeeccccccC-cCcceEEEEecccccccCCcEEEEcccee---------cc
Confidence 4589999999999954 33 2345689999875432110 00 0 0 124566776654 78
Q ss_pred eecCeeechhhHHHHHHHHhhccc-CCCCCCCeeE--EecCCCCCHHHHHHHHHHhhhh-------------cCCceeee
Q 021885 72 VNNGIVQNWEDMGQVWDHAFFSEL-KIDPPECKIL--LTDPPLNPAKNREKMVETMFEK-------------YNFAGVFI 135 (306)
Q Consensus 72 ~~~g~i~~~d~l~~ll~~~~~~~L-~~~~~~~~vl--l~e~~~~~~~~r~~l~e~lfE~-------------~~v~~v~~ 135 (306)
++.|.+.+ +..+.++.+.+.+.. .-......++ ++.|......+|+.+.+.+... +++..+.+
T Consensus 90 l~~~~~~~-~~~~~ll~~~l~~~~~~~~~~~~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~l 168 (346)
T 2fsj_A 90 QGDGRLAS-KEAFPLIAAALWESGIHNDGSPVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIM 168 (346)
T ss_dssp SSTTCTTS-TTTHHHHHHHHHHHCCCC---CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEE
T ss_pred cCCCcccC-hhHHHHHHHHHHHhhhccCCCceEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEE
Confidence 99999998 888888888885432 1112345688 8888877777888887775542 23567999
Q ss_pred ehhhhHhhhhc--C-----C-CeEEEEecCCCceEEEEee--cceecccceEEecccchhHHHHHHHHHhhc
Q 021885 136 QIQAVLTLYAQ--G-----L-LTGLVIDSGDGVTHVVPVV--DGYSFPHLTKRMNVAGRHITSYLVDLLSRR 197 (306)
Q Consensus 136 ~~~~~ls~~~~--g-----~-~tglVVDiG~~~t~v~pV~--dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~ 197 (306)
+++|.+|++++ + . .+-+|||+|++.|.++.+. +|.++.......++||+++++.+.+.++++
T Consensus 169 i~Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~i~~~ 240 (346)
T 2fsj_A 169 RPQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAKE 240 (346)
T ss_dssp EETTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHHHHH
T ss_pred EccHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHHHHHHHHHH
Confidence 99999999984 2 1 3459999999999999998 787666556778999999999999888765
No 15
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.06 E-value=4.6e-09 Score=101.81 Aligned_cols=117 Identities=15% Similarity=0.139 Sum_probs=88.1
Q ss_pred CeeEEecCCCCCHHHHHHHHHHhhhhcCCceeeeehhhhHhhhhcCC-------CeEEEEecCCCceEEEEee--ccee-
Q 021885 102 CKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGL-------LTGLVIDSGDGVTHVVPVV--DGYS- 171 (306)
Q Consensus 102 ~~vll~e~~~~~~~~r~~l~e~lfE~~~v~~v~~~~~~~ls~~~~g~-------~tglVVDiG~~~t~v~pV~--dG~~- 171 (306)
..++++.|...+..+|+.+.+ +++..|++.+.++.+|.||++++|. .+.+|+|+|++.+.++.+. +|..
T Consensus 140 ~~~VitVPa~f~~~qr~a~~~-A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~ 218 (554)
T 1yuw_A 140 TNAVVTVPAYFNDSQRQATKD-AGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFE 218 (554)
T ss_dssp CEEEEEECTTCCHHHHHHHHH-HHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEE
T ss_pred CeEEEEECCCCCHHHHHHHHH-HHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEE
Confidence 578999999999998888877 5678899999999999999998863 4689999999999999886 5654
Q ss_pred cccceEEecccchhHHHHHHHHHhh-----cCCccccC-----ChHHHHHHHHHhccc
Q 021885 172 FPHLTKRMNVAGRHITSYLVDLLSR-----RGYSMNRT-----ADFETVRQIKEKLCY 219 (306)
Q Consensus 172 ~~~~~~~~~~GG~~l~~~l~~~l~~-----~~~~~~~~-----~~~~~~~~iKe~~~~ 219 (306)
+.......++||+++++.|.+.+.. .+.++... .-...++.+|+.++.
T Consensus 219 v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~ 276 (554)
T 1yuw_A 219 VKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSS 276 (554)
T ss_dssp EEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhccc
Confidence 2223345689999999999888753 22222210 013567778887764
No 16
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=98.92 E-value=1.6e-08 Score=98.98 Aligned_cols=118 Identities=17% Similarity=0.117 Sum_probs=86.0
Q ss_pred CCeeEEecCCCCCHHHHHHHHHHhhhhcCCceeeeehhhhHhhhhcCCC------eEEEEecCCCceEEEEeec------
Q 021885 101 ECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLL------TGLVIDSGDGVTHVVPVVD------ 168 (306)
Q Consensus 101 ~~~vll~e~~~~~~~~r~~l~e~lfE~~~v~~v~~~~~~~ls~~~~g~~------tglVVDiG~~~t~v~pV~d------ 168 (306)
-..++++.|...+..+|+.+.+. .+..|+..+.++..|.||++++|.. +.+|+|+|++.+.|+.+.-
T Consensus 135 v~~~VitVPa~f~d~qr~a~~~A-~~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~ 213 (605)
T 2kho_A 135 VTEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGE 213 (605)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHH-HHTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTS
T ss_pred CcEEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCC
Confidence 35788999999998888887776 4678999999999999999988643 4799999999999998863
Q ss_pred cee-cccceEEecccchhHHHHHHHHHhhc-----CCccccC-----ChHHHHHHHHHhccc
Q 021885 169 GYS-FPHLTKRMNVAGRHITSYLVDLLSRR-----GYSMNRT-----ADFETVRQIKEKLCY 219 (306)
Q Consensus 169 G~~-~~~~~~~~~~GG~~l~~~l~~~l~~~-----~~~~~~~-----~~~~~~~~iKe~~~~ 219 (306)
|.. +.......++||.++++.|.+.+..+ +.++... .-...++.+|+.++.
T Consensus 214 g~~~v~a~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~ 275 (605)
T 2kho_A 214 KTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSS 275 (605)
T ss_dssp CEEEEEEEEEESSCSGGGTHHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTS
T ss_pred CeEEEEEECCCCCccHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCC
Confidence 432 11122345899999999998887653 3333210 013566777777654
No 17
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=98.83 E-value=4.4e-08 Score=96.90 Aligned_cols=117 Identities=11% Similarity=0.128 Sum_probs=86.2
Q ss_pred CeeEEecCCCCCHHHHHHHHHHhhhhcCCceeeeehhhhHhhhhcCC------------CeEEEEecCCCceEEEEee--
Q 021885 102 CKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGL------------LTGLVIDSGDGVTHVVPVV-- 167 (306)
Q Consensus 102 ~~vll~e~~~~~~~~r~~l~e~lfE~~~v~~v~~~~~~~ls~~~~g~------------~tglVVDiG~~~t~v~pV~-- 167 (306)
..++++.|...+..+|+.+.+. .+..|+..+.++..|.|+++++|. .+.+|+|+|++.+.|+.+.
T Consensus 139 ~~~VITVPa~f~~~qR~a~~~A-a~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~ 217 (675)
T 3d2f_A 139 TDVCIAVPPWYTEEQRYNIADA-ARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFK 217 (675)
T ss_dssp CEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEE
T ss_pred ceEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEec
Confidence 5789999999999888888774 467899999999999999987642 4579999999999998885
Q ss_pred ccee-cccceEEecccchhHHHHHHHHHhh-----cCCccccC-----ChHHHHHHHHHhccc
Q 021885 168 DGYS-FPHLTKRMNVAGRHITSYLVDLLSR-----RGYSMNRT-----ADFETVRQIKEKLCY 219 (306)
Q Consensus 168 dG~~-~~~~~~~~~~GG~~l~~~l~~~l~~-----~~~~~~~~-----~~~~~~~~iKe~~~~ 219 (306)
+|.. +.......++||+++++.|.+.+.. .+.++... .-+..++.+|+.++.
T Consensus 218 ~g~~~V~a~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~ 280 (675)
T 3d2f_A 218 KGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSA 280 (675)
T ss_dssp TTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEcCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCc
Confidence 5654 2222334689999999999988853 22222110 013567778877653
No 18
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=98.77 E-value=7.1e-08 Score=89.83 Aligned_cols=113 Identities=12% Similarity=0.088 Sum_probs=81.1
Q ss_pred hHHHHHHHHhh---cccCCCCCCCeeEEecCCCCCHHHHHHHHHHhhhhcCCceeeeehhhhHhhhhcCCC--------e
Q 021885 82 DMGQVWDHAFF---SELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGLL--------T 150 (306)
Q Consensus 82 ~l~~ll~~~~~---~~L~~~~~~~~vll~e~~~~~~~~r~~l~e~lfE~~~v~~v~~~~~~~ls~~~~g~~--------t 150 (306)
....+++++.. ..++ .....++++.|...+...|+.+.+. .+..|+..+.++.+|.|++++++.. +
T Consensus 130 v~~~~L~~l~~~a~~~~~--~~~~~~vitvPa~~~~~~r~~~~~a-~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~ 206 (409)
T 4gni_A 130 IATRYLRRLVGAASEYLG--KKVTSAVITIPTNFTEKQKAALIAA-AAAADLEVLQLISEPAAAVLAYDARPEATISDKI 206 (409)
T ss_dssp HHHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHTTC------CCEE
T ss_pred HHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCE
Confidence 34455555542 2333 2346789999998888888776655 5568999999999999999998764 4
Q ss_pred EEEEecCCCceEEEEee--cceec-ccceEEecccchhHHHHHHHHHhhc
Q 021885 151 GLVIDSGDGVTHVVPVV--DGYSF-PHLTKRMNVAGRHITSYLVDLLSRR 197 (306)
Q Consensus 151 glVVDiG~~~t~v~pV~--dG~~~-~~~~~~~~~GG~~l~~~l~~~l~~~ 197 (306)
.+|+|+|++.|.++-+. +|..- .......++||.++|+.|.+.+..+
T Consensus 207 vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~~ 256 (409)
T 4gni_A 207 IVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHFSKE 256 (409)
T ss_dssp EEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHHHHHHHH
Confidence 89999999999998762 33211 1111246899999999998888643
No 19
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=98.73 E-value=1.3e-07 Score=92.46 Aligned_cols=112 Identities=18% Similarity=0.121 Sum_probs=80.1
Q ss_pred hHHHHHHHHhh---cccCCCCCCCeeEEecCCCCCHHHHHHHHHHhhhhcCCceeeeehhhhHhhhhcCC------CeEE
Q 021885 82 DMGQVWDHAFF---SELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQGL------LTGL 152 (306)
Q Consensus 82 ~l~~ll~~~~~---~~L~~~~~~~~vll~e~~~~~~~~r~~l~e~lfE~~~v~~v~~~~~~~ls~~~~g~------~tgl 152 (306)
....+|+++.. ..++. .-..++++.|...+...|+.+.+. .+..|++.+.++..|.||++++|. .+-+
T Consensus 115 i~a~iL~~lk~~ae~~lg~--~v~~~VITVPa~f~~~qr~a~~~A-a~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vl 191 (605)
T 4b9q_A 115 ISAEVLKKMKKTAEDYLGE--PVTEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIA 191 (605)
T ss_dssp HHHHHHHHHHHHHHHHHTS--CCCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEE
T ss_pred HHHHHHHHHHHHHHHHhCC--CCCeEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEeCcHHHHHHHhhhhccCCCCEEE
Confidence 33444444432 33433 335789999999888888766554 567899999999999999988853 4568
Q ss_pred EEecCCCceEEEEeecce----e-c--ccceEEecccchhHHHHHHHHHhh
Q 021885 153 VIDSGDGVTHVVPVVDGY----S-F--PHLTKRMNVAGRHITSYLVDLLSR 196 (306)
Q Consensus 153 VVDiG~~~t~v~pV~dG~----~-~--~~~~~~~~~GG~~l~~~l~~~l~~ 196 (306)
|+|+|++.+.++.+.-+. . + ........+||.++++.|.+.+..
T Consensus 192 V~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l~~ 242 (605)
T 4b9q_A 192 VYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVE 242 (605)
T ss_dssp EEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred EEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHHHH
Confidence 999999999999875433 1 1 112223578999999999888764
No 20
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=98.66 E-value=1.2e-06 Score=80.57 Aligned_cols=88 Identities=15% Similarity=0.245 Sum_probs=69.6
Q ss_pred HhhhhcCCceeeeehhhhHhhhhcC------C-CeEEEEecCCCceEEEEeecceecccceEEecccchhHHHHHHHHHh
Q 021885 123 TMFEKYNFAGVFIQIQAVLTLYAQG------L-LTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLS 195 (306)
Q Consensus 123 ~lfE~~~v~~v~~~~~~~ls~~~~g------~-~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~~GG~~l~~~l~~~l~ 195 (306)
-+++..|+.-..+..+|++++.+++ + .+.+|||+|++.|.++.+.+|.++. ....++||.++++.+.+.+
T Consensus 158 ~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~~--~~~~~~GG~~i~~~i~~~~- 234 (377)
T 2ych_A 158 EALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLA--VRVLTLSGKDFTEAIARSF- 234 (377)
T ss_dssp HHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEEE--EEEESCSHHHHHHHHHHHT-
T ss_pred HHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEEE--EEeeechHHHHHHHHHHHh-
Confidence 3557889999999999999998764 2 3469999999999999999998874 4678999999999987632
Q ss_pred hcCCccccCChHHHHHHHHHhccccc
Q 021885 196 RRGYSMNRTADFETVRQIKEKLCYIS 221 (306)
Q Consensus 196 ~~~~~~~~~~~~~~~~~iKe~~~~vs 221 (306)
+ .+...++++|+++++..
T Consensus 235 --~------~~~~~aE~~K~~~~~~~ 252 (377)
T 2ych_A 235 --N------LDLLAAEEVKRTYGMAT 252 (377)
T ss_dssp --T------CCHHHHHHHHHHTC---
T ss_pred --C------CCHHHHHHHHhhccccc
Confidence 1 24678899999887654
No 21
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=98.57 E-value=2.8e-07 Score=84.30 Aligned_cols=190 Identities=17% Similarity=0.123 Sum_probs=120.4
Q ss_pred CCCCCeEEEeCCCceEEEeecCCCCCCccCCceEEEeCccch-hh---hh---------cccCCc-eEeccccccccCCc
Q 021885 1 MDNRNVVVCDNGTGYVKCGFAGENFPNSVFPCVVGRPMLRYE-ES---LM---------EQELKD-TIVGAAALDLRHQL 66 (306)
Q Consensus 1 ~~~~~~vViD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~-~~---~~---------~~~~~~-~~~g~~~~~~~~~~ 66 (306)
|...-.+-+|+|-+++|+ ..++ =...|||.++....... .. .. ...... +++|+.+......
T Consensus 1 m~~~~iigiD~G~~~~K~-~~~~--~~~~fPS~v~~~~~~~~~l~~~~~~~~~~~~v~v~~~~~~~y~vG~~A~~~~~~- 76 (355)
T 3js6_A 1 MSNVYVMALDFGNGFVKG-KIND--EKFVIPSRIGRKTNENNQLKGFVDNKLDVSEFIINGNNDEVLLFGNDLDKTTNT- 76 (355)
T ss_dssp -CCEEEEEEEECSSEEEE-EETT--EEEEEESEEEECCSSCCSSTTTSCCCCSCEEEEETTCTTCCEEESTTHHHHCSC-
T ss_pred CCccEEEEEEcCCCcEEE-ecCC--eEEEeceeeeecccCcccccccccCCCCceEEEEecCCeEEEEEchhhhhcCcc-
Confidence 444567889999999996 4443 24678999986543321 00 00 012345 8899877542111
Q ss_pred eeecee-ecCeeechhhHHHHHHHHhhcccCCC----CCCCeeEEecCCCCCHHHH-HHHHHHhhhh-----------cC
Q 021885 67 DVSYPV-NNGIVQNWEDMGQVWDHAFFSELKID----PPECKILLTDPPLNPAKNR-EKMVETMFEK-----------YN 129 (306)
Q Consensus 67 ~~~~p~-~~g~i~~~d~l~~ll~~~~~~~L~~~----~~~~~vll~e~~~~~~~~r-~~l~e~lfE~-----------~~ 129 (306)
..+.. ......+ +....++..++. .+..+ ..+-.+++..|.......| +++.+.+... +.
T Consensus 77 -~~~~~~~~~k~~~-~~~~iL~l~Ala-~~~~~~~~~~~~~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~ 153 (355)
T 3js6_A 77 -GKDTASTNDRYDI-KSFKDLVECSIG-LLAREVPEEVVNVVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTIN 153 (355)
T ss_dssp -CEECCCSTTGGGS-HHHHHHHHHHHH-HHHTTSCSSEEEEEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEE
T ss_pred -cccccccCCcccC-HHHHHHHHHHHH-HHHHhccCCCceEEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEE
Confidence 11111 2222222 333444444442 11111 1133577777766555555 4677766532 23
Q ss_pred CceeeeehhhhHhhhhcC-----------CCeEEEEecCCCceEEEEeecceecccceEEecccchhHHHHHHHHHhhc
Q 021885 130 FAGVFIQIQAVLTLYAQG-----------LLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRR 197 (306)
Q Consensus 130 v~~v~~~~~~~ls~~~~g-----------~~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~ 197 (306)
+..+.+++++++|+++.+ ..+-+|||+|+..|.++.+.+|.++......+++||..+++.+.+.++++
T Consensus 154 I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~~ 232 (355)
T 3js6_A 154 VKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRIASHVSKK 232 (355)
T ss_dssp EEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTC--
T ss_pred EEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHHHHHHHHh
Confidence 478999999999999875 45678999999999999998999888777889999999999999999886
No 22
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=98.47 E-value=3.7e-07 Score=82.67 Aligned_cols=186 Identities=15% Similarity=0.070 Sum_probs=117.8
Q ss_pred CCCCCeEEEeCCCceEEEeec--C---CCCCCccCCceEEEeCccchhh-----hhcccCCceEeccccccccCCceeec
Q 021885 1 MDNRNVVVCDNGTGYVKCGFA--G---ENFPNSVFPCVVGRPMLRYEES-----LMEQELKDTIVGAAALDLRHQLDVSY 70 (306)
Q Consensus 1 ~~~~~~vViD~Gs~~~k~G~a--g---~~~P~~~~ps~v~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~ 70 (306)
|+..-.|-||+|-+++|+-.. + +..-+..|||.++......... .-....+.+++|+.+...
T Consensus 4 ~~~~~iigiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~~~~~~~~~v~~~G~~Y~vG~~a~~~-------- 75 (329)
T 4apw_A 4 ITNEYVMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYIDIEGNSHKIELDGKEYLIGEQGVED-------- 75 (329)
T ss_dssp -CCEEEEEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESCCCCCSCEEEECSSSEEEESCCSSSC--------
T ss_pred ccCceEEEEecCCceEEEEeccCCCcccceeEEeecccccccccccccCCCCceEEEECCEEEEeCcccccc--------
Confidence 344557899999999999653 2 1223457899987644321000 001234578888765321
Q ss_pred eeecCeeechhhHHHHHHHHhhcccCCCC-CCCeeEEecCCCCC--HHHHHHHHHHhhhh-------------cCCceee
Q 021885 71 PVNNGIVQNWEDMGQVWDHAFFSELKIDP-PECKILLTDPPLNP--AKNREKMVETMFEK-------------YNFAGVF 134 (306)
Q Consensus 71 p~~~g~i~~~d~l~~ll~~~~~~~L~~~~-~~~~vll~e~~~~~--~~~r~~l~e~lfE~-------------~~v~~v~ 134 (306)
-..... +-+....++-.++-..++... .+..+++..|...- .+.|+++.+.+-.. +.+..+.
T Consensus 76 ~~~~~k--~~~~~~~L~l~Aia~~~~~~~~~~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~ 153 (329)
T 4apw_A 76 SSETSK--TNLIHKLAAYTAITQVLDSNKNNKVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDIT 153 (329)
T ss_dssp SGGGCC--CTTHHHHHHHHHHHTTCCSSSEEEEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEE
T ss_pred cccCCc--CchhHHHHHHHHHHHHhccccCceEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEE
Confidence 011111 223455556666633343221 22345555554322 23455666655521 2356788
Q ss_pred eehhhhHhhhhc----CCCeEEEEecCCCceEEEEeecceecccceEEecccchhHHHHHHHHHhh
Q 021885 135 IQIQAVLTLYAQ----GLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSR 196 (306)
Q Consensus 135 ~~~~~~ls~~~~----g~~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~ 196 (306)
+.+++..+++.. ...+.+|||+|+..|.++.+.+|.++.......++||..+++.+.+.+++
T Consensus 154 v~pe~~ga~~~~~~~~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~l~~ 219 (329)
T 4apw_A 154 IKAEGSGVLFLEQENFKNKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALTD 219 (329)
T ss_dssp EEEHHHHHHHHSCCCCTTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHTSSSS
T ss_pred EEeccHHHHhhcchhhccCCEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHHHHHHh
Confidence 999999999876 23567999999999999999999988776678899999999999998887
No 23
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=98.43 E-value=6.1e-07 Score=80.79 Aligned_cols=87 Identities=17% Similarity=0.161 Sum_probs=66.5
Q ss_pred hhcCCceeeeehhhhHhhhhcC-----CCeEEEEecCCCceEEEEeeccee-cccceEEecccchhHHHHHHHHHhhcCC
Q 021885 126 EKYNFAGVFIQIQAVLTLYAQG-----LLTGLVIDSGDGVTHVVPVVDGYS-FPHLTKRMNVAGRHITSYLVDLLSRRGY 199 (306)
Q Consensus 126 E~~~v~~v~~~~~~~ls~~~~g-----~~tglVVDiG~~~t~v~pV~dG~~-~~~~~~~~~~GG~~l~~~l~~~l~~~~~ 199 (306)
+.+++..+.+++++++++++.+ ..+.+|||+|++.|.++.+.+|.+ +.......++||.++++.+.+.+.+++.
T Consensus 136 ~~~~i~~v~~~~e~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~~~ 215 (320)
T 2zgy_A 136 DTFTIKDVKVMPESIPAGYEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLART 215 (320)
T ss_dssp CCCEEEEEEEEESSHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTCCSB
T ss_pred cEEEEEEEEEecCcHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHHcCC
Confidence 4556778999999999998763 356799999999999999998876 3333456699999999999999976532
Q ss_pred ccccCChHHHHHHH-HHh
Q 021885 200 SMNRTADFETVRQI-KEK 216 (306)
Q Consensus 200 ~~~~~~~~~~~~~i-Ke~ 216 (306)
. .+...++++ |.+
T Consensus 216 ~----i~~~~ae~~lk~~ 229 (320)
T 2zgy_A 216 K----GSSYLADDIIIHR 229 (320)
T ss_dssp G----GGHHHHHHHHHTT
T ss_pred C----CCHHHHHHHHHHh
Confidence 2 245556666 554
No 24
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=98.30 E-value=1.9e-05 Score=73.75 Aligned_cols=85 Identities=13% Similarity=0.110 Sum_probs=70.7
Q ss_pred hhhhcCCceeeeehhhhHhhhhcCC-----CeEEEEecCCCceEEEEeecceecccceEEecccchhHHHHHHHHHhhcC
Q 021885 124 MFEKYNFAGVFIQIQAVLTLYAQGL-----LTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRG 198 (306)
Q Consensus 124 lfE~~~v~~v~~~~~~~ls~~~~g~-----~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~ 198 (306)
+++..|+.-..++.+|+|+++++.. .+.+|||+|++.|.++.+.+|.+.. ....++||+++|+.+.+.+.
T Consensus 176 ~~~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~~--~~~i~~GG~~it~dIa~~l~--- 250 (419)
T 4a2a_A 176 FLQDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIK--ISYVPVGMKHVIKDVSAVLD--- 250 (419)
T ss_dssp HHHTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEEE--EEEESCCHHHHHHHHHHHHT---
T ss_pred HHHHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEEE--EEecccHHHHHHHHHHHHHC---
Confidence 4567888888999999999998865 3589999999999999999998874 35689999999999987653
Q ss_pred CccccCChHHHHHHHHHhccc
Q 021885 199 YSMNRTADFETVRQIKEKLCY 219 (306)
Q Consensus 199 ~~~~~~~~~~~~~~iKe~~~~ 219 (306)
...+.++++|.+++.
T Consensus 251 ------~~~~~AE~iK~~~g~ 265 (419)
T 4a2a_A 251 ------TSFEESERLIITHGN 265 (419)
T ss_dssp ------CCHHHHHHHHHHHCC
T ss_pred ------CCHHHHHHHHHHhcc
Confidence 247889999988764
No 25
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=95.43 E-value=0.031 Score=53.08 Aligned_cols=74 Identities=18% Similarity=0.152 Sum_probs=57.7
Q ss_pred hhhhHhhhhc----CC-CeEEEEecCCCceEEEEeecceecccceEEecccchhHHHHHHHHHhhcCCccccCChHHHHH
Q 021885 137 IQAVLTLYAQ----GL-LTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETVR 211 (306)
Q Consensus 137 ~~~~ls~~~~----g~-~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~ 211 (306)
-++.+|.+++ ++ ....+||+|+++|.+.-+.+|..+. ...++.||+.+|+.+..-|.-. +...+|
T Consensus 390 ~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv~--a~~ip~gG~~VT~DIA~~Lgt~--------d~~~AE 459 (610)
T 2d0o_A 390 AEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDII--ATHLAGAGDMVTMIIARELGLE--------DRYLAE 459 (610)
T ss_dssp EHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCEE--EEEEECSHHHHHHHHHHHHTCC--------CHHHHH
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEE--EEEeccchHHHHHHHHHHhCCC--------CHHHHH
Confidence 5666666665 22 3468899999999999999998773 4678999999999998777532 589999
Q ss_pred HHHHhccccc
Q 021885 212 QIKEKLCYIS 221 (306)
Q Consensus 212 ~iKe~~~~vs 221 (306)
+||. ++...
T Consensus 460 rIK~-YG~A~ 468 (610)
T 2d0o_A 460 EIKK-YPLAK 468 (610)
T ss_dssp HHHH-SCEEE
T ss_pred Hhcc-cCcee
Confidence 9998 66544
No 26
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=95.38 E-value=0.031 Score=53.14 Aligned_cols=74 Identities=18% Similarity=0.212 Sum_probs=57.4
Q ss_pred hhhhHhhhhc----CC-CeEEEEecCCCceEEEEeecceecccceEEecccchhHHHHHHHHHhhcCCccccCChHHHHH
Q 021885 137 IQAVLTLYAQ----GL-LTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITSYLVDLLSRRGYSMNRTADFETVR 211 (306)
Q Consensus 137 ~~~~ls~~~~----g~-~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~~GG~~l~~~l~~~l~~~~~~~~~~~~~~~~~ 211 (306)
-+|.+|.+++ ++ ....+||+|+++|.+.-+.+|..+. ...++.||+.+|+.+..-|.-. +...+|
T Consensus 392 ~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv~--a~~ip~gG~~VT~DIA~~Lg~~--------d~~~AE 461 (607)
T 1nbw_A 392 VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQIT--AVHLAGAGNMVSLLIKTELGLE--------DLSLAE 461 (607)
T ss_dssp CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCEE--EEEEECCHHHHHHHHHHHHTCS--------CHHHHH
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEE--EEEeccchHHHHHHHHHHhCCC--------CHHHHH
Confidence 5666666655 22 3468899999999999999998773 4678999999999998777532 589999
Q ss_pred HHHHhccccc
Q 021885 212 QIKEKLCYIS 221 (306)
Q Consensus 212 ~iKe~~~~vs 221 (306)
+||. ++...
T Consensus 462 rIK~-YG~A~ 470 (607)
T 1nbw_A 462 AIKK-YPLAK 470 (607)
T ss_dssp HHHH-SCEEE
T ss_pred Hhcc-cCcee
Confidence 9998 66544
No 27
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=95.30 E-value=0.035 Score=49.48 Aligned_cols=73 Identities=16% Similarity=0.080 Sum_probs=51.4
Q ss_pred HHHHHHHHHhhhhcCCceeeeeh---hhhHhhh----hcC-CCeEEEEecCCCceEEEEeecceecccceEEecccchhH
Q 021885 115 KNREKMVETMFEKYNFAGVFIQI---QAVLTLY----AQG-LLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHI 186 (306)
Q Consensus 115 ~~r~~l~e~lfE~~~v~~v~~~~---~~~ls~~----~~g-~~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~~GG~~l 186 (306)
.+++.+++.+-+..|++ +-++. .+.++.. +.+ ..+++|||+|.++|.++-..+|.+. .....++|+-.+
T Consensus 97 ~N~~~fl~~v~~~~G~~-i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~~G~v~l 173 (315)
T 1t6c_A 97 KNAEEFLERVKREVGLV-VEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGKGYKVR--EVISLPIGIVNL 173 (315)
T ss_dssp TTHHHHHHHHHHHTCCC-EEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEETTEEE--EEEEECCCHHHH
T ss_pred cCHHHHHHHHHHHHCCC-EEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEeCCcee--eEEEEeccHHHH
Confidence 45567777777777874 33433 2322221 223 6789999999999999998888775 346789999998
Q ss_pred HHHH
Q 021885 187 TSYL 190 (306)
Q Consensus 187 ~~~l 190 (306)
++.+
T Consensus 174 ~e~~ 177 (315)
T 1t6c_A 174 TETF 177 (315)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8776
No 28
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=93.96 E-value=0.12 Score=49.22 Aligned_cols=73 Identities=19% Similarity=0.144 Sum_probs=49.4
Q ss_pred HHHHHHHHHhhhhcCCceeeeeh---hhhHhhhh----cC-CCeEEEEecCCCceEEEEeecceecccceEEecccchhH
Q 021885 115 KNREKMVETMFEKYNFAGVFIQI---QAVLTLYA----QG-LLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHI 186 (306)
Q Consensus 115 ~~r~~l~e~lfE~~~v~~v~~~~---~~~ls~~~----~g-~~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~~GG~~l 186 (306)
.+++.+.+-+-+..|++ +-+++ .+-++..| .. ...++|||+|.++|.++-.-+|.+. ....+++|.-.+
T Consensus 96 ~N~~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl 172 (513)
T 1u6z_A 96 LNATDFLKRAEKVIPYP-IEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPI--LVESRRMGCVSF 172 (513)
T ss_dssp TTHHHHHHHHTTTCSSC-EEECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEETTEEE--EEEEESCCHHHH
T ss_pred cCHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEeCCeee--EEEEEeccHHHH
Confidence 34566777777778874 33332 23333222 12 2379999999999999988888765 346789999988
Q ss_pred HHHH
Q 021885 187 TSYL 190 (306)
Q Consensus 187 ~~~l 190 (306)
++.+
T Consensus 173 te~f 176 (513)
T 1u6z_A 173 AQLY 176 (513)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8765
No 29
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=93.73 E-value=0.058 Score=48.03 Aligned_cols=73 Identities=14% Similarity=0.205 Sum_probs=49.7
Q ss_pred HHHHHHHHHhhhhcCCceeeee---hhhhH------hhhhcCCCeEEEEecCCCceEEEEeecceecccceEEecccchh
Q 021885 115 KNREKMVETMFEKYNFAGVFIQ---IQAVL------TLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRH 185 (306)
Q Consensus 115 ~~r~~l~e~lfE~~~v~~v~~~---~~~~l------s~~~~g~~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~~GG~~ 185 (306)
.+++.+.+-+-+..|++ +-++ ..+-+ +.+.....+++|+|+|.++|.++-+.+|.+.. ...+|+|.-.
T Consensus 89 ~N~~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~--~~Sl~lG~vr 165 (315)
T 3mdq_A 89 SNKQVLIDRIKKEVNID-VEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNEILW--KQSFEIGGQR 165 (315)
T ss_dssp TTHHHHHHHHHHHHCCC-EEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSCEEE--EEEESCCHHH
T ss_pred cCHHHHHHHHHHHHCCC-eEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCeEee--eEEEechhhH
Confidence 34456666677777775 3333 23332 22222236799999999999999999887663 4678999988
Q ss_pred HHHHH
Q 021885 186 ITSYL 190 (306)
Q Consensus 186 l~~~l 190 (306)
+++.+
T Consensus 166 l~e~f 170 (315)
T 3mdq_A 166 LIDRF 170 (315)
T ss_dssp HHHHS
T ss_pred HHHHh
Confidence 88754
No 30
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=93.24 E-value=0.43 Score=45.26 Aligned_cols=72 Identities=13% Similarity=0.158 Sum_probs=49.1
Q ss_pred HHHHHHHHHhhhhcCCceeeee---hhhhHhhh----hcCCCeEEEEecCCCceEEEEeecceecccceEEecccchhHH
Q 021885 115 KNREKMVETMFEKYNFAGVFIQ---IQAVLTLY----AQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHIT 187 (306)
Q Consensus 115 ~~r~~l~e~lfE~~~v~~v~~~---~~~~ls~~----~~g~~tglVVDiG~~~t~v~pV~dG~~~~~~~~~~~~GG~~l~ 187 (306)
.+++.+.+-+-+..|++ +-++ ..+-++.. +.....++|||+|.++|.++-+-+|.+.. ...+++|.-.++
T Consensus 100 ~N~~~fl~~i~~~tG~~-ievIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~~~~~~~--~~Sl~lG~vrl~ 176 (508)
T 3hi0_A 100 ENGPDFIREAEAILGCE-IEVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIKDKSCGE--GITLPLGGLRLS 176 (508)
T ss_dssp TTHHHHHHHHHHHHTSC-EEECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEETTEECC--CEEESCCHHHHH
T ss_pred cCHHHHHHHHHHHHCCC-eEEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEeeCCeeee--EEEecceEEehh
Confidence 34556666677777875 3333 23333222 22345789999999999999999988763 467899998777
Q ss_pred HH
Q 021885 188 SY 189 (306)
Q Consensus 188 ~~ 189 (306)
+.
T Consensus 177 e~ 178 (508)
T 3hi0_A 177 EQ 178 (508)
T ss_dssp HH
T ss_pred hc
Confidence 63
No 31
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=93.12 E-value=0.86 Score=41.05 Aligned_cols=101 Identities=11% Similarity=0.057 Sum_probs=54.1
Q ss_pred hhhHHHHHHHHhhcccCCCCCCCeeEEecCCC---CCHHHHHHHHHHhhhhc-------CCceeeeeh---hhhH----h
Q 021885 80 WEDMGQVWDHAFFSELKIDPPECKILLTDPPL---NPAKNREKMVETMFEKY-------NFAGVFIQI---QAVL----T 142 (306)
Q Consensus 80 ~d~l~~ll~~~~~~~L~~~~~~~~vll~e~~~---~~~~~r~~l~e~lfE~~-------~v~~v~~~~---~~~l----s 142 (306)
-+.+++.++ -|.+ . -.-...++.+..... .+...++.+.+.+-+.+ +. .+-+++ ++.+ .
T Consensus 52 ~~~~~~~l~-~f~~-~-~~~~~~~v~~~ATaa~R~a~n~~~~~~l~~v~~~~~~~~~~~g~-~v~VIsG~eEa~~~~~gv 127 (353)
T 3aap_A 52 SVTIDAYLT-MLLA-D-APIHNIPVYFYATAGMRLLPQSQQKKYYDELEYWFRQQSQWQLV-EAKTITGNDEALFDWLAV 127 (353)
T ss_dssp HHHHHHHHH-HHHT-T-CSCCSEEEEEEECHHHHTSCHHHHHHHHHHHHHHHHTCSSEEEE-EEEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHH-H-HhcCCCcEEEEecHHHhcCcHHHHHHHHHHHHHHHhhCCCCCCC-eEEECChHHHHHHHHHHH
Confidence 345566666 3322 1 112234555554431 23444666666666555 32 334443 2222 2
Q ss_pred hhhcC------CCeEEEEecCCCceEEEEeec--ceecccceEEecccch
Q 021885 143 LYAQG------LLTGLVIDSGDGVTHVVPVVD--GYSFPHLTKRMNVAGR 184 (306)
Q Consensus 143 ~~~~g------~~tglVVDiG~~~t~v~pV~d--G~~~~~~~~~~~~GG~ 184 (306)
.|..+ ..+.+|+|+|.++|.++-... +.+.......+++||.
T Consensus 128 ~~~l~~~~~~~~~t~~v~DiGGGStei~~~~~~~~~~~~~~~~sl~lG~~ 177 (353)
T 3aap_A 128 NYKLDTLKSVQNKSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYGQ 177 (353)
T ss_dssp HHHTTCSSSCCSSCEEEEEECSSEEEEEEECCCCTTSCGGGEEEEEETTE
T ss_pred HHHhhhccccccccEEEEEeCCCceEEEEecCCccccCCCceEEEEECCc
Confidence 33443 247999999999999987644 3333333566777775
No 32
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=90.09 E-value=0.26 Score=43.96 Aligned_cols=26 Identities=23% Similarity=0.551 Sum_probs=23.8
Q ss_pred CeEEEEecCCCceEEEEeecceeccc
Q 021885 149 LTGLVIDSGDGVTHVVPVVDGYSFPH 174 (306)
Q Consensus 149 ~tglVVDiG~~~t~v~pV~dG~~~~~ 174 (306)
.++++||||...|.++|+.+|.++..
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~pl~g 152 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKVVAE 152 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECCC
T ss_pred CCEEEEEcCcchhhhhhhcCCeeccc
Confidence 57999999999999999999999753
No 33
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=83.17 E-value=7.6 Score=33.31 Aligned_cols=18 Identities=17% Similarity=0.266 Sum_probs=16.1
Q ss_pred eEEEeCCCceEEEeecCC
Q 021885 6 VVVCDNGTGYVKCGFAGE 23 (306)
Q Consensus 6 ~vViD~Gs~~~k~G~ag~ 23 (306)
-++||+|..++|+|+-.+
T Consensus 4 lL~IDIGNT~iK~gl~d~ 21 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDG 21 (266)
T ss_dssp EEEEEECSSEEEEEEEET
T ss_pred EEEEEECCCeEEEEEEEC
Confidence 689999999999998754
No 34
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=81.86 E-value=5.3 Score=34.36 Aligned_cols=18 Identities=28% Similarity=0.303 Sum_probs=15.3
Q ss_pred eEEEeCCCceEEEeecCC
Q 021885 6 VVVCDNGTGYVKCGFAGE 23 (306)
Q Consensus 6 ~vViD~Gs~~~k~G~ag~ 23 (306)
-++||+|-.++|+|+-.+
T Consensus 2 lL~IDIGNT~ik~gl~~~ 19 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEE 19 (268)
T ss_dssp EEEEEECSSEEEEEEEET
T ss_pred EEEEEECcCcEEEEEEEC
Confidence 378999999999998754
No 35
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=79.98 E-value=1.2 Score=39.94 Aligned_cols=75 Identities=21% Similarity=0.150 Sum_probs=49.2
Q ss_pred HHHHHHHHHhhhhcCCceeeeeh---hhhHhhhhc--------CCCeEEEEecCCCceEEEEeec--ceec--ccceEEe
Q 021885 115 KNREKMVETMFEKYNFAGVFIQI---QAVLTLYAQ--------GLLTGLVIDSGDGVTHVVPVVD--GYSF--PHLTKRM 179 (306)
Q Consensus 115 ~~r~~l~e~lfE~~~v~~v~~~~---~~~ls~~~~--------g~~tglVVDiG~~~t~v~pV~d--G~~~--~~~~~~~ 179 (306)
.+++.+.+-+-+..|++ +-+++ .+.++..|. ...+++|+|+|.++|.++-..+ +.+. ......+
T Consensus 102 ~N~~~fl~~v~~~tGi~-ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~Sl 180 (343)
T 3cer_A 102 ENREEFEDEIERILGVR-PEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSM 180 (343)
T ss_dssp TTHHHHHHHHHHHHSSC-CEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEE
T ss_pred cCHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccceeEEE
Confidence 34566777777777774 33332 344433332 2356999999999999998766 3321 1235678
Q ss_pred cccchhHHHHH
Q 021885 180 NVAGRHITSYL 190 (306)
Q Consensus 180 ~~GG~~l~~~l 190 (306)
|+|+..+++.+
T Consensus 181 plG~v~lt~~~ 191 (343)
T 3cer_A 181 NIGSVRMTERH 191 (343)
T ss_dssp SCCHHHHHHHT
T ss_pred ehhHHHHHHHh
Confidence 99999998776
No 36
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=74.02 E-value=13 Score=32.15 Aligned_cols=51 Identities=14% Similarity=0.074 Sum_probs=37.7
Q ss_pred HHHhhhhcCCceeeeehhhhHhhhh-------cCCCeEEEEecCCCceEEEEeecceecc
Q 021885 121 VETMFEKYNFAGVFIQIQAVLTLYA-------QGLLTGLVIDSGDGVTHVVPVVDGYSFP 173 (306)
Q Consensus 121 ~e~lfE~~~v~~v~~~~~~~ls~~~-------~g~~tglVVDiG~~~t~v~pV~dG~~~~ 173 (306)
.+.|=+.+++| +++.+++-+++++ .+..+.++|-+|.+ .-..-+.+|.++.
T Consensus 101 ~~~l~~~~~~p-v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~giv~~G~l~~ 158 (326)
T 2qm1_A 101 KEQIESALGIP-FALDNDANVAALGERWKGAGENNPDVIFITLGTG-VGGGIVAAGKLLH 158 (326)
T ss_dssp HHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECC
T ss_pred HHHHHHHhCCC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEee
Confidence 34444556887 7888888888765 25678999999987 5566778998775
No 37
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=73.68 E-value=14 Score=32.26 Aligned_cols=52 Identities=13% Similarity=0.140 Sum_probs=38.4
Q ss_pred HHHHhhhhcCCceeeeehhhhHhhhh-------cCCCeEEEEecCCCceEEEEeecceecc
Q 021885 120 MVETMFEKYNFAGVFIQIQAVLTLYA-------QGLLTGLVIDSGDGVTHVVPVVDGYSFP 173 (306)
Q Consensus 120 l~e~lfE~~~v~~v~~~~~~~ls~~~-------~g~~tglVVDiG~~~t~v~pV~dG~~~~ 173 (306)
+.+.|-+.+++| +++.+++-+++++ .+..+.++|-+|.+ .-..-|.+|.++.
T Consensus 88 l~~~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~G~l~~ 146 (321)
T 3vgl_A 88 LKDKVEQRVGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGIIIGNKLRR 146 (321)
T ss_dssp HHHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECC
T ss_pred HHHHHhhhhCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEECCEEec
Confidence 334445567888 8888888888765 34578999999977 5566778998875
No 38
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=70.73 E-value=45 Score=28.02 Aligned_cols=18 Identities=11% Similarity=0.172 Sum_probs=15.9
Q ss_pred eEEEeCCCceEEEeecCC
Q 021885 6 VVVCDNGTGYVKCGFAGE 23 (306)
Q Consensus 6 ~vViD~Gs~~~k~G~ag~ 23 (306)
-++||+|-.++|+|+-.+
T Consensus 5 ~L~IDIGNT~ik~gl~~~ 22 (249)
T 3bex_A 5 YLLVDVGNTHSVFSITED 22 (249)
T ss_dssp EEEEEECSSEEEEEEESS
T ss_pred EEEEEECCCeEEEEEEEC
Confidence 588999999999998854
No 39
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=69.64 E-value=30 Score=29.50 Aligned_cols=68 Identities=9% Similarity=-0.023 Sum_probs=46.0
Q ss_pred eEEecCCCCCHHHHHHHHHHhhhhcCC-ceeeeehhhhHhhhh-cCCCeEEEEecCCCceEEEEeecceec
Q 021885 104 ILLTDPPLNPAKNREKMVETMFEKYNF-AGVFIQIQAVLTLYA-QGLLTGLVIDSGDGVTHVVPVVDGYSF 172 (306)
Q Consensus 104 vll~e~~~~~~~~r~~l~e~lfE~~~v-~~v~~~~~~~ls~~~-~g~~tglVVDiG~~~t~v~pV~dG~~~ 172 (306)
+-+..|-.. ......+.+.|=+.+++ ..+.+.+++-+++++ .|..++++|=+|.+..-..-+.+|.+.
T Consensus 63 igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~g~~~~v~v~~GTGigg~~i~~~G~~~ 132 (291)
T 1zbs_A 63 VYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALCGDSEGIACILGTGSNSCLFDGREIKA 132 (291)
T ss_dssp EEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHTTTSCEEEEEESSSEEEEEECSSSEEE
T ss_pred EEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhcCCCCcEEEEecCChheEEECCCCcEE
Confidence 445555443 22223555666666775 358899999999997 578889999899887544455688875
No 40
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=64.15 E-value=57 Score=28.30 Aligned_cols=89 Identities=17% Similarity=0.202 Sum_probs=53.4
Q ss_pred hhhHHHHHHHHhhcccCCCCC-C-CeeEEecCCCCCHHHHHHHHHHhhhhcC---CceeeeehhhhHhhhhcCCCeEEEE
Q 021885 80 WEDMGQVWDHAFFSELKIDPP-E-CKILLTDPPLNPAKNREKMVETMFEKYN---FAGVFIQIQAVLTLYAQGLLTGLVI 154 (306)
Q Consensus 80 ~d~l~~ll~~~~~~~L~~~~~-~-~~vll~e~~~~~~~~r~~l~e~lfE~~~---v~~v~~~~~~~ls~~~~g~~tglVV 154 (306)
|+.+..+++.++ +..+.+.. + ..+-+..|-.........+.+.|=+.++ .| +++.+++-+++++....++++|
T Consensus 49 ~~~i~~~i~~~~-~~~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~p-v~v~NDa~aaa~a~~~~~~v~v 126 (347)
T 2ch5_A 49 VERINEMVNRAK-RKAGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSES-YLITTDAAGSIATATPDGGVVL 126 (347)
T ss_dssp HHHHHHHHHHHH-HHHTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSC-EEEEEHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHHH-HhcCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCce-EEEECcHHHHHHhhCCCCcEEE
Confidence 455666666665 33333332 2 3455666655554444566666666675 54 7888888888887544678888
Q ss_pred ecCCCceEEEEe-eccee
Q 021885 155 DSGDGVTHVVPV-VDGYS 171 (306)
Q Consensus 155 DiG~~~t~v~pV-~dG~~ 171 (306)
-+|.+.-- ..| .+|..
T Consensus 127 ~~GTGig~-~~v~~~G~~ 143 (347)
T 2ch5_A 127 ISGTGSNC-RLINPDGSE 143 (347)
T ss_dssp EESSSEEE-EEECTTSCE
T ss_pred EEcCCcee-EEEcCCCCE
Confidence 88876543 333 35543
No 41
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=63.30 E-value=71 Score=27.26 Aligned_cols=87 Identities=15% Similarity=0.166 Sum_probs=49.4
Q ss_pred hhhHHHHHHHHhhcccCCCCCCC---eeEEecCCCCCHHHHHHHHHHhhhhc--CCceeeeehhhhHhhhhc-CCCeEEE
Q 021885 80 WEDMGQVWDHAFFSELKIDPPEC---KILLTDPPLNPAKNREKMVETMFEKY--NFAGVFIQIQAVLTLYAQ-GLLTGLV 153 (306)
Q Consensus 80 ~d~l~~ll~~~~~~~L~~~~~~~---~vll~e~~~~~~~~r~~l~e~lfE~~--~v~~v~~~~~~~ls~~~~-g~~tglV 153 (306)
|+.+..+++.++ +..+.+..+- .+-+..|-......... |-+.+ +. .+++.+++-+++++. +..++++
T Consensus 53 ~~~l~~~i~~~l-~~~~~~~~~i~~~~igig~pG~v~~~~~~~----l~~~~~~~~-pv~v~NDa~aaa~ge~~~~~~v~ 126 (305)
T 1zc6_A 53 WQAVLSTLEAAF-QQAGLPAAPASACAIGLGLSGVHNRQWAGE----FESQAPGFA-RLSLATDGYTTLLGAHGGQPGII 126 (305)
T ss_dssp HHHHHHHHHHHH-HHTTCCCCCGGGEEEEEEESCCCTTSHHHH----HHHTCCCCS-EEEEECHHHHHHHHHTTTSSEEE
T ss_pred HHHHHHHHHHHH-HhcCCChhhhccceEEEEecCCCchHHHHH----HHHhCCCCc-eEEEECCHHHHHHhhcCCCCeEE
Confidence 455666666666 3444444332 34555554433222222 22233 44 488899999888874 5678899
Q ss_pred EecCCCceEEEEeecceec
Q 021885 154 IDSGDGVTHVVPVVDGYSF 172 (306)
Q Consensus 154 VDiG~~~t~v~pV~dG~~~ 172 (306)
|-+|.+..-..-+.+|...
T Consensus 127 v~~GTGigg~~i~~~G~~~ 145 (305)
T 1zc6_A 127 VALGTGSIGEALYPDGSHR 145 (305)
T ss_dssp EEESSSEEEEEECTTSCEE
T ss_pred EEecCCeEEEEEeCCCcEE
Confidence 9999886423223378654
No 42
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=55.57 E-value=4.3 Score=38.82 Aligned_cols=37 Identities=30% Similarity=0.476 Sum_probs=30.5
Q ss_pred cceEECCCccE----EEECCccccccccCCCCCCCCCCCcc
Q 021885 238 VKNYTLPDGRV----IKVGTERFQAPEALFTPVSLYFFSVV 274 (306)
Q Consensus 238 ~~~y~lPdg~~----i~l~~er~~~~E~lF~P~~~g~~~~~ 274 (306)
...+.+|++.. +++++|++.+||.||+|+.++.....
T Consensus 333 ~~~~~~p~~~~~~~~~~~~~E~~~~p~~lf~p~~~~~~~~~ 373 (593)
T 4fo0_A 333 EFQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGIVGQK 373 (593)
T ss_dssp EEEECCTTSCEEEEEEEECTHHHHHHHTTTSGGGGCCCSSC
T ss_pred hhhcccCCCCceeeEEeccchhhcCchhhcChhhhcccccc
Confidence 45678899864 67899999999999999998876554
No 43
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=53.27 E-value=1e+02 Score=26.21 Aligned_cols=53 Identities=19% Similarity=0.192 Sum_probs=36.9
Q ss_pred HHHHhhhhcCCceeeeehhhhHhhhhc-------CCCeEEEEecCCCceEEEEeecceeccc
Q 021885 120 MVETMFEKYNFAGVFIQIQAVLTLYAQ-------GLLTGLVIDSGDGVTHVVPVVDGYSFPH 174 (306)
Q Consensus 120 l~e~lfE~~~v~~v~~~~~~~ls~~~~-------g~~tglVVDiG~~~t~v~pV~dG~~~~~ 174 (306)
+.+.|-+.+++| +++.+++-+++++- +..+.++|-+|.+. -..-|.+|.+...
T Consensus 90 l~~~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGi-G~gii~~g~l~~G 149 (302)
T 3vov_A 90 IRRILEEATGRP-VFLENDANAAALAEHHLGAAQGEESSLYLTVSTGI-GGGVVLGGRVLRG 149 (302)
T ss_dssp HHHHHHHHHSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSE-EEEEEETTEECCC
T ss_pred hHHHHHHhhCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCce-eEEEEECCEEeeC
Confidence 334455667887 77888888776532 45788999999774 4555678887743
No 44
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=47.72 E-value=37 Score=28.83 Aligned_cols=53 Identities=15% Similarity=0.203 Sum_probs=41.5
Q ss_pred HHHHHhhhhcCCceeeeehhhhHhhhhc-----CCCeEEEEecCCCceEEEEeecceeccc
Q 021885 119 KMVETMFEKYNFAGVFIQIQAVLTLYAQ-----GLLTGLVIDSGDGVTHVVPVVDGYSFPH 174 (306)
Q Consensus 119 ~l~e~lfE~~~v~~v~~~~~~~ls~~~~-----g~~tglVVDiG~~~t~v~pV~dG~~~~~ 174 (306)
.+.+.| +.+++| +++.+++-+++++- +..+.++|-+|.+ .-..-|.+|.+...
T Consensus 86 ~l~~~l-~~~~~p-v~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtG-iG~giv~~G~l~~G 143 (292)
T 2gup_A 86 SWYEAL-SSYQLP-VHLENDANCVGLSELLAHPELENAACVVIGTG-IGGAMIINGRLHRG 143 (292)
T ss_dssp BHHHHT-GGGCCC-EEEEEHHHHHHHHHHHHCTTCSSEEEEEESSS-EEEEEEETTEEECC
T ss_pred CHHHHH-HHcCCC-EEEechHHHHHHHHHHhcCCCCeEEEEEECCc-eEEEEEECCEEEec
Confidence 466777 889998 88899998888873 6688999999986 44666789987753
No 45
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=46.45 E-value=82 Score=28.06 Aligned_cols=55 Identities=9% Similarity=0.055 Sum_probs=37.5
Q ss_pred HHHHHHhhhhcCCceeeeehhhh---------Hhhh-----------------------hcCC--C--eEEEEecCCCce
Q 021885 118 EKMVETMFEKYNFAGVFIQIQAV---------LTLY-----------------------AQGL--L--TGLVIDSGDGVT 161 (306)
Q Consensus 118 ~~l~e~lfE~~~v~~v~~~~~~~---------ls~~-----------------------~~g~--~--tglVVDiG~~~t 161 (306)
-.+.+.|-+.+++|.+ +.+++- ++++ +.|+ . +.+++.+|.+.
T Consensus 110 ~~l~~~l~~~~~~Pv~-v~NDan~~~~~~~a~aaalp~~~r~~gfhgls~~~~aE~~~~g~~~~~~~~~~v~~~lGtGi- 187 (381)
T 1saz_A 110 AIIAHRFSSETGVPAY-VVDPVVVDEMEDVARVSGHPNYQRKSIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGGI- 187 (381)
T ss_dssp HHHHHHHHHHHCCCEE-EESCTTBCCCCGGGTBCSSTTCBCCCCSCHHHHHHHHHHHHHHTTCCGGGCEEEEEEESSSE-
T ss_pred HHHHHHHHHhcCCCEE-EeCCCccccCcHHHHHcCCcchhhhcccccccHHHHHHHHHHhcCCCCccCCEEEEEeCCCc-
Confidence 3555667778899864 666664 3333 3333 4 89999999875
Q ss_pred EEEEeecceeccc
Q 021885 162 HVVPVVDGYSFPH 174 (306)
Q Consensus 162 ~v~pV~dG~~~~~ 174 (306)
-+..|.+|.++..
T Consensus 188 G~g~i~~G~~~~G 200 (381)
T 1saz_A 188 SIAAHRKGRVIDV 200 (381)
T ss_dssp EEEEEETTEEEEE
T ss_pred EEEEEECCEEEEe
Confidence 5777889988754
No 46
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=43.78 E-value=15 Score=35.63 Aligned_cols=45 Identities=11% Similarity=0.118 Sum_probs=37.9
Q ss_pred hhhHHHHHHHHhhcccCCCCCCCeeEEecCCCCCHHHHHHHHHHhhhhcCC
Q 021885 80 WEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNF 130 (306)
Q Consensus 80 ~d~l~~ll~~~~~~~L~~~~~~~~vll~e~~~~~~~~r~~l~e~lfE~~~v 130 (306)
-+.++.|-+|+| ..+++||+|+.....+...+++|+++|-|.||=
T Consensus 235 ~~v~~~I~~~AF------~~s~yPvilslE~Hc~~~qQ~~ma~~~~~~~gd 279 (624)
T 1djx_A 235 CDVLRAIRDYAF------KASPYPVILSLENHCSLEQQRVMARHLRAILGP 279 (624)
T ss_dssp HHHHHHHHHHTT------TSCSSCEEEEEEEECCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHhcc------cCCCCCEEEEecccCCHHHHHHHHHHHHHHHhh
Confidence 356777777777 468999999999999999999999999888873
No 47
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=39.04 E-value=22 Score=35.46 Aligned_cols=45 Identities=18% Similarity=0.180 Sum_probs=37.7
Q ss_pred hhhHHHHHHHHhhcccCCCCCCCeeEEecCCCC-CHHHHHHHHHHhhhhcCC
Q 021885 80 WEDMGQVWDHAFFSELKIDPPECKILLTDPPLN-PAKNREKMVETMFEKYNF 130 (306)
Q Consensus 80 ~d~l~~ll~~~~~~~L~~~~~~~~vll~e~~~~-~~~~r~~l~e~lfE~~~v 130 (306)
-+.++.|-+|+| ..+++||+|+..... +..++.+|+++|-|.||=
T Consensus 385 ~~v~~~I~~~AF------~~S~yPvIlslE~Hc~s~~qQ~~ma~~~~~~~Gd 430 (799)
T 2zkm_X 385 KEAIEAIAESAF------KTSPYPIILSFENHVDSPRQQAKMAEYCRTIFGD 430 (799)
T ss_dssp HHHHHHHHHHTT------SSCCSCEEEEEEECCCCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHhcc------cCCCCCEEEEccccCCCHHHHHHHHHHHHHHhhh
Confidence 356777777777 368999999999999 899999999999888874
No 48
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=37.12 E-value=1.9e+02 Score=24.31 Aligned_cols=61 Identities=26% Similarity=0.317 Sum_probs=38.7
Q ss_pred eeEEecCCCCCHHHHHHHHHHhhhhcCCceeeeehhhhHhhhhc-CCCeEEEEecCCCceEEEEeecce
Q 021885 103 KILLTDPPLNPAKNREKMVETMFEKYNFAGVFIQIQAVLTLYAQ-GLLTGLVIDSGDGVTHVVPVVDGY 170 (306)
Q Consensus 103 ~vll~e~~~~~~~~r~~l~e~lfE~~~v~~v~~~~~~~ls~~~~-g~~tglVVDiG~~~t~v~pV~dG~ 170 (306)
.+-+..|-.........+.+.+=+ +++| +++.+++-+++++. ...++++|-+|.+. |.+|+
T Consensus 62 ~igi~~~G~~~~~~~~~l~~~l~~-~~~p-v~v~ND~~aaa~~e~~~~~~v~l~~GTG~-----i~~g~ 123 (299)
T 2e2o_A 62 VVGMGVAGLDSKFDWENFTPLASL-IAPK-VIIQHDGVIALFAETLGEPGVVVIAGTGS-----VVEGY 123 (299)
T ss_dssp EEEEEETTCCSHHHHHHHHHHHTT-SSSE-EEEEEHHHHHHHHHHTTSCEEEEEESSSE-----EEEEE
T ss_pred EEEEEcCCCCchhHHHHHHHHHHh-CCCC-EEEeCcHHHHHhhccCCCCeEEEEecCCE-----EEEEE
Confidence 455555544433333445555545 7765 67888888887765 35788999999883 55565
No 49
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=33.03 E-value=32 Score=34.41 Aligned_cols=45 Identities=9% Similarity=0.095 Sum_probs=38.5
Q ss_pred hhhHHHHHHHHhhcccCCCCCCCeeEEecCCCCCHHHHHHHHHHhhhhcCC
Q 021885 80 WEDMGQVWDHAFFSELKIDPPECKILLTDPPLNPAKNREKMVETMFEKYNF 130 (306)
Q Consensus 80 ~d~l~~ll~~~~~~~L~~~~~~~~vll~e~~~~~~~~r~~l~e~lfE~~~v 130 (306)
.+.++.|-+|+| ..+++||+|+.-...+..++.+|+++|-|.||=
T Consensus 394 ~~v~~~I~~~AF------~~S~yPvIlslE~Hc~~~qQ~~ma~~~~~~~Gd 438 (816)
T 3qr0_A 394 KDVVYAIAESAF------KVSDYPVILSFENHCSVAQQKLLAQYCNEAFGE 438 (816)
T ss_dssp HHHHHHHHHHTT------SSCCSCEEEEEEECCCHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHhcc------cCCCCCEEEEEecCCCHHHHHHHHHHHHHHhhh
Confidence 466777778888 367899999999999999999999999988874
No 50
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=32.56 E-value=38 Score=31.32 Aligned_cols=35 Identities=20% Similarity=0.079 Sum_probs=23.9
Q ss_pred CeEEEEecCCCceEEEEeeccee-cccceEEecccc
Q 021885 149 LTGLVIDSGDGVTHVVPVVDGYS-FPHLTKRMNVAG 183 (306)
Q Consensus 149 ~tglVVDiG~~~t~v~pV~dG~~-~~~~~~~~~~GG 183 (306)
.+..|+|+|.++|+++-..++.. -+.....+.++|
T Consensus 190 ~t~gvlDlGGgStqi~~~~~~~~~~~~~~~~l~l~g 225 (456)
T 3cj1_A 190 GTLGAMDLGGASTQITFETTSPSEDPGNEVHLRLYG 225 (456)
T ss_dssp CCCEEEEECSSEEEEEEECCSCCSCGGGEEEEEETT
T ss_pred CceEEEEcCCCceEEEeccCCccCCCCceEEEEeCC
Confidence 46789999999999998866542 123334455555
No 51
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=28.65 E-value=1.1e+02 Score=25.61 Aligned_cols=51 Identities=16% Similarity=0.051 Sum_probs=37.1
Q ss_pred HHHHhhhhcCCceeeeehhhhHhhhhc-------CCCeEEEEecCCCceEEEEeecceecc
Q 021885 120 MVETMFEKYNFAGVFIQIQAVLTLYAQ-------GLLTGLVIDSGDGVTHVVPVVDGYSFP 173 (306)
Q Consensus 120 l~e~lfE~~~v~~v~~~~~~~ls~~~~-------g~~tglVVDiG~~~t~v~pV~dG~~~~ 173 (306)
+.+.+=+.+++| +++.+++-+++++- +. +.++|.+|.+ .-..-|.+|.++.
T Consensus 88 l~~~l~~~~~~p-v~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~GtG-iG~gii~~G~l~~ 145 (289)
T 2aa4_A 88 LVKTLEQLTNLP-TIAINDAQAAAWAEFQALDGDIT-DMVFITVSTG-VGGGVVSGCKLLT 145 (289)
T ss_dssp HHHHHHHHHCSC-EEEEEHHHHHHHHHHHTSCTTCC-CEEEEEESSS-EEEEEEETTEEEC
T ss_pred hHHHHHHHHCCC-EEEechHHHHHHHHHHhCCCCCc-eEEEEEeCcc-EEEEEEECCEEee
Confidence 344445567887 78888888887652 34 8999999987 4566778998774
No 52
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=28.52 E-value=43 Score=30.97 Aligned_cols=89 Identities=12% Similarity=0.116 Sum_probs=47.7
Q ss_pred hhHHHHHHHHhhcccCC-CCCCCeeEEecCCCC---C---HHHHHHHHHHhhhhc---CC--ceeeeeh---hh----hH
Q 021885 81 EDMGQVWDHAFFSELKI-DPPECKILLTDPPLN---P---AKNREKMVETMFEKY---NF--AGVFIQI---QA----VL 141 (306)
Q Consensus 81 d~l~~ll~~~~~~~L~~-~~~~~~vll~e~~~~---~---~~~r~~l~e~lfE~~---~v--~~v~~~~---~~----~l 141 (306)
+.++.+++.+. +.... .-+..|+.+....-. + ...++.+.+.+-+.+ ++ ..+.+++ ++ ++
T Consensus 89 ~~l~~Ll~~a~-~~vp~~~~~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi~ 167 (452)
T 3zx3_A 89 AYLAECMKMST-ERIPASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWIT 167 (452)
T ss_dssp HHHHHHHHHHH-HHSCHHHHTTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HhCCHHHcCCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHHH
Confidence 34666666655 22111 114567777665422 1 123455555444433 22 3455543 22 33
Q ss_pred hhhhcCC------CeEEEEecCCCceEEEEeecce
Q 021885 142 TLYAQGL------LTGLVIDSGDGVTHVVPVVDGY 170 (306)
Q Consensus 142 s~~~~g~------~tglVVDiG~~~t~v~pV~dG~ 170 (306)
..|..|. .+..++|+|.++|+|+=..++.
T Consensus 168 vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~~~~ 202 (452)
T 3zx3_A 168 INYLLGRFKTPGGSTFGALDLGGASTQITFVPLNS 202 (452)
T ss_dssp HHHHTTTTC---CCCCEEEEECSSEEEEEECCSSC
T ss_pred HHhhhccccCCCCCceEEEecCCCceEEEeccCCC
Confidence 4445553 5667889999999998776554
No 53
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=25.24 E-value=1.2e+02 Score=25.71 Aligned_cols=48 Identities=13% Similarity=0.081 Sum_probs=31.3
Q ss_pred EEEecCCCceEEEEeecceecccceEEec-ccchhHHHHHHHHHhhcCC
Q 021885 152 LVIDSGDGVTHVVPVVDGYSFPHLTKRMN-VAGRHITSYLVDLLSRRGY 199 (306)
Q Consensus 152 lVVDiG~~~t~v~pV~dG~~~~~~~~~~~-~GG~~l~~~l~~~l~~~~~ 199 (306)
++||+|.+.+...-+-++..+.......+ ...+.+...+.++++..+.
T Consensus 5 L~IDIGNT~iK~gl~d~~~l~~~~r~~T~~~t~de~~~~l~~ll~~~~~ 53 (266)
T 3djc_A 5 LCIDVGNSHIYGGVFDGDEIKLRFRHTSKVSTSDELGIFLKSVLRENNC 53 (266)
T ss_dssp EEEEECSSEEEEEEEETTEEEEEEEEECSCCCHHHHHHHHHHHHHTTTC
T ss_pred EEEEECCCeEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHcCC
Confidence 89999999997777766655543222222 3455666677888876653
No 54
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=23.28 E-value=55 Score=25.51 Aligned_cols=72 Identities=15% Similarity=0.121 Sum_probs=51.2
Q ss_pred hhhhcCCceeeeehhhhHhhhhcCCCeEEEEecCCCceEEEEeecceecccceE-EecccchhHHHHHHHHHhhcCC
Q 021885 124 MFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTK-RMNVAGRHITSYLVDLLSRRGY 199 (306)
Q Consensus 124 lfE~~~v~~v~~~~~~~ls~~~~g~~tglVVDiG~~~t~v~pV~dG~~~~~~~~-~~~~GG~~l~~~l~~~l~~~~~ 199 (306)
+|| +.+..+.+.+.++.++--....+-+.+|.-.-.|+.+||..|.--..... ...+ .++..+.+.|+..+.
T Consensus 19 lfE-ihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~G~~p~y~fts~Y~V---~~d~~fl~yL~~~~l 91 (156)
T 2yrb_A 19 LFE-IHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVRGLHPEYNFTSQYLV---HVNDLFLQYIQKNTI 91 (156)
T ss_dssp EEE-EEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEESSSCCCCEEEEEEE---CCSHHHHHHHHHCCE
T ss_pred EEE-EEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeecccccCCCCCcceEEEEEE---EeCHHHHHHHhcCCE
Confidence 444 45667777777776665566788899999999999999999865433322 2233 677788888888753
No 55
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=22.47 E-value=1.6e+02 Score=25.07 Aligned_cols=52 Identities=12% Similarity=0.021 Sum_probs=37.3
Q ss_pred HHHhhhhcCCceeeeehhhhHhhhhc-------CCCeEEEEecCCCceEEEEeecceeccc
Q 021885 121 VETMFEKYNFAGVFIQIQAVLTLYAQ-------GLLTGLVIDSGDGVTHVVPVVDGYSFPH 174 (306)
Q Consensus 121 ~e~lfE~~~v~~v~~~~~~~ls~~~~-------g~~tglVVDiG~~~t~v~pV~dG~~~~~ 174 (306)
.+.+=+.+++| +++.+++-+++++- +..+.++|-+|.+ .-..-|.+|.+...
T Consensus 113 ~~~l~~~~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv~~G~l~~G 171 (327)
T 2ap1_A 113 RADLSARLDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLVLNGKPITG 171 (327)
T ss_dssp HHHHHHHHTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEEETTEEECC
T ss_pred HHHHHHHHCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEEECCEEeec
Confidence 34444557887 88889888887752 4578899999987 44666788887653
No 56
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=22.41 E-value=1.7e+02 Score=25.08 Aligned_cols=51 Identities=18% Similarity=0.234 Sum_probs=37.6
Q ss_pred HHHhhhhc-CCceeeeehhhhHhhhh-------cCCCeEEEEecCCCceEEEEeecceecc
Q 021885 121 VETMFEKY-NFAGVFIQIQAVLTLYA-------QGLLTGLVIDSGDGVTHVVPVVDGYSFP 173 (306)
Q Consensus 121 ~e~lfE~~-~v~~v~~~~~~~ls~~~-------~g~~tglVVDiG~~~t~v~pV~dG~~~~ 173 (306)
.+.|-+.+ ++| +++.+++-+++++ .+..+.++|-+|.+ .-..-|.+|.++.
T Consensus 110 ~~~l~~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~gii~~G~l~~ 168 (321)
T 3r8e_A 110 VEILRSEFPHIH-FKIENDAKCAALGEYYFGENKRMQTFILLALGTG-VGSGVMMNGKLFI 168 (321)
T ss_dssp HHHHHHHCTTSE-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECC
T ss_pred HHHHHHHcCCCC-EEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEec
Confidence 33444567 887 7888888887664 25688999999987 5566778998875
Done!