Query 021887
Match_columns 306
No_of_seqs 220 out of 1345
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 10:48:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021887.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021887hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2cir_A Hexose-6-phosphate muta 100.0 1E-53 3.5E-58 388.3 25.4 271 10-288 5-290 (297)
2 2hta_A Putative enzyme related 100.0 1.6E-53 5.4E-58 389.0 26.6 268 9-287 38-307 (309)
3 3k25_A SLR1438 protein; struct 100.0 4.9E-52 1.7E-56 375.6 28.2 262 3-287 2-287 (289)
4 1jov_A HI1317; hypothetical pr 100.0 6.6E-52 2.3E-56 371.1 25.0 252 8-285 17-269 (270)
5 3q1n_A Galactose mutarotase re 100.0 2.5E-45 8.6E-50 332.4 27.5 246 14-286 2-293 (294)
6 3dcd_A Galactose mutarotase re 100.0 3E-44 1E-48 326.9 29.8 248 14-290 2-295 (307)
7 3mwx_A Aldose 1-epimerase; str 100.0 4.7E-44 1.6E-48 328.7 22.2 261 8-289 10-324 (326)
8 3nre_A Aldose 1-epimerase; str 100.0 2.4E-43 8.2E-48 318.7 24.6 246 11-288 1-290 (291)
9 3os7_A Galactose mutarotase-li 100.0 1.1E-43 3.6E-48 328.1 22.5 260 7-288 13-340 (341)
10 1yga_A Hypothetical 37.9 kDa p 100.0 3.9E-41 1.3E-45 311.3 21.7 267 6-287 4-341 (342)
11 1snz_A Aldose 1-epimerase; mut 100.0 9.5E-40 3.2E-44 302.0 19.8 260 10-287 19-342 (344)
12 1nsx_A Galactose mutarotase; e 100.0 1.2E-37 4.1E-42 288.0 21.1 257 11-289 11-339 (347)
13 1lur_A Aldose 1-epimerase; vit 100.0 1E-37 3.6E-42 287.7 19.6 259 9-287 10-336 (339)
14 3imh_A Galactose-1-epimerase; 100.0 1.1E-35 3.7E-40 272.8 22.8 260 11-289 17-332 (338)
15 1z45_A GAL10 bifunctional prot 100.0 4.2E-35 1.4E-39 294.3 20.6 261 9-286 370-698 (699)
16 3ty1_A Hypothetical aldose 1-e 99.9 2.3E-24 7.9E-29 201.1 18.1 263 9-289 45-354 (384)
17 3bs6_A Inner membrane protein 94.5 0.46 1.6E-05 41.6 12.1 123 13-154 4-136 (280)
18 3blc_A Inner membrane protein 93.8 0.92 3.1E-05 40.7 12.8 123 12-153 34-166 (330)
19 4ep8_B Urease subunit beta; al 84.6 0.97 3.3E-05 32.8 3.7 40 130-172 13-52 (101)
20 4ac7_B Urease subunit beta; hy 78.8 1.5 5.2E-05 33.1 3.1 33 129-163 18-50 (126)
21 4ubp_B Protein (urease (chain 78.8 1.5 5.2E-05 33.1 3.1 33 129-163 18-50 (126)
22 3isy_A Bsupi, intracellular pr 75.2 6.6 0.00023 29.6 5.9 33 123-155 6-38 (120)
23 1k1x_A 4-alpha-glucanotransfer 70.8 75 0.0026 31.1 13.8 133 8-153 394-572 (659)
24 3qga_A UREA2, fusion of urease 59.1 5 0.00017 33.4 2.4 33 129-163 117-149 (225)
25 1e9y_A Urease subunit alpha; h 55.1 5.6 0.00019 33.4 2.1 43 119-163 106-149 (238)
26 1yew_A Particulate methane mon 48.6 19 0.00064 32.4 4.5 29 126-154 255-283 (382)
27 3rfr_A PMOB; membrane, oxidore 45.8 19 0.00066 32.7 4.2 27 127-153 290-316 (419)
28 4gy7_A Urease; JACK bean, hydr 37.5 26 0.00088 35.4 4.1 32 129-162 143-174 (840)
29 2kl8_A OR15; structural genomi 35.6 33 0.0011 22.6 3.0 19 124-142 29-47 (85)
30 2yfo_A Alpha-galactosidase-suc 34.0 1E+02 0.0035 30.4 7.8 47 103-156 130-178 (720)
31 3ndz_E Endoglucanase D; cellot 32.3 64 0.0022 23.5 4.6 37 126-165 3-42 (107)
32 3zqx_A Cellulose 1,4-beta-cell 31.1 96 0.0033 24.0 5.7 47 126-172 3-55 (146)
33 2wnx_A Glycoside hydrolase, fa 31.0 93 0.0032 24.7 5.7 38 134-171 26-64 (170)
34 2xbt_A Cellulosomal scaffoldin 28.8 64 0.0022 25.4 4.4 34 135-168 24-58 (160)
35 2xn2_A Alpha-galactosidase; hy 28.8 1E+02 0.0035 30.5 6.8 45 104-155 135-181 (732)
36 4fnq_A Alpha-galactosidase AGA 28.4 1E+02 0.0036 30.4 6.8 56 103-165 130-187 (729)
37 2ys4_A Hydrocephalus-inducing 26.1 46 0.0016 24.5 2.9 41 125-165 31-71 (122)
38 3mi6_A Alpha-galactosidase; NE 23.3 2E+02 0.0069 28.5 7.6 45 103-154 131-177 (745)
39 3cfu_A Uncharacterized lipopro 20.2 76 0.0026 24.8 3.2 25 136-163 48-72 (159)
No 1
>2cir_A Hexose-6-phosphate mutarotase; hypothetical protein, isomerase; HET: BG6; 1.60A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A*
Probab=100.00 E-value=1e-53 Score=388.30 Aligned_cols=271 Identities=32% Similarity=0.621 Sum_probs=232.3
Q ss_pred CCccEEEEECCCcc--EEEEecCCeEEEEEEeCCCeeeEEecCCCCCCCCCcccCcccEEccccCCCC------CCCCce
Q 021887 10 DGLPRIILTEPTGS--SAEVLLYGGQVVSWKNERREELLFMSSKSFWKPPKAIRGGIPVCFPQFGNLG------LLEQHG 81 (306)
Q Consensus 10 ~~~~~~~L~~~~~~--~a~v~~~Ga~l~s~~~~~g~e~L~~~~~~~~~~~~~irgg~p~lfP~~gr~~------~~~~HG 81 (306)
++++.++|+|+++. +++|.++||+|+||+.+ |+|+||.++.+.|...+++|||+|+||||+||+. ++++||
T Consensus 5 ~~~~~~~L~n~~~~~~~~~i~~~Ga~l~s~~~~-G~~vl~~~~~~~~~~~~~~~GGip~l~P~~gr~~~~~~~y~l~~HG 83 (297)
T 2cir_A 5 ETDKEVVLTHPADETTSVHILKYGATVYSWKLK-SEEQLWLSTAAKLDGSKPVRGGIPLVFPVFGKNSTDEHLSKLPQHG 83 (297)
T ss_dssp ECSSEEEEEETTEEEEEEEEETBTTEEEEEEET-TEECBCBCTTCCCSSSSCCSBSBCEEBSCSSCCSSSTTGGGSCTTB
T ss_pred cCCCEEEEeCCCCceeEEEEECCCcEEEEEEeC-CeEEEecCcHHHhcCCCCccCCCCEEEEecCCCCCCcccCCCCCcc
Confidence 46789999998756 89999999999999985 8899999988889989999999999999999983 789999
Q ss_pred EEeccCcEEEeeCCCCCCCCCccEEEEEecC---ChhhhccCCCceEEEEEEEEeCCeEEEEEEEEeCC-CCceeeeeec
Q 021887 82 FARNRFWSLDEDASPLPPANNQSTVDLILKS---TEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVD-NKAFSFMFAL 157 (306)
Q Consensus 82 far~~~W~v~~~~~~~~~~~~~~~v~l~l~~---~~~~~~~~P~~f~l~~~y~L~~~~L~i~~~v~N~~-~~~~p~~~g~ 157 (306)
|+|++.|++++.. +++..+|+|++.+ +++++++|||+|+++++|+|.+++|+|+|+++|++ +++|||++|+
T Consensus 84 far~~~W~v~~~~-----~~~~~~v~l~l~s~~~~~~~~~g~P~~~~~~vty~L~~~~L~i~~~~~N~~~d~~~~~~~~~ 158 (297)
T 2cir_A 84 LARNSTWEFLGQT-----KENPPTVQFGLKPEIANPELTKLWPMDYLLILTVELGSDYLKTAIEVENTSSSKELKFNWLF 158 (297)
T ss_dssp SGGGSBCEEEEEE-----EETTEEEEEEECGGGSCHHHHHHSCCCCEEEEEEEECSSEEEEEEEEECCCSSCCEEEEEEE
T ss_pred ccCCCceEEEeec-----cCCceEEEEEecCCCCCHHHHhhCCCcEEEEEEEEEcCCEEEEEEEEEcCCCCcceEEeeec
Confidence 9999999998762 0123679999998 78889999999999999999989999999999999 9999999999
Q ss_pred cccccCCCcceEEEeccCCCccccccccccceeccCceeeecCccCeEEeCCC--CeEEEEeCCCCcEEEEEecCCCcEE
Q 021887 158 RNYLSVSDISEVRVEGLETLDYFDYLMNKERFTEQADAITFDGEIDRVYLSTP--TKIAIIDHEKKRTFELRKDGMPDSV 235 (306)
Q Consensus 158 HpYF~~~~~~~~~~~~~~~~~~~d~l~~~~~~~~~~~~~~~~~~~D~~y~~~~--~~~~l~~~~~~~~l~v~~~~~~~~v 235 (306)
||||+++++.++.+.|+.+..++|.... .......+.+.+..++|++|.... ..++|.++ ++++|+|.++++|++|
T Consensus 159 H~YFnl~~~~~~~~~gv~~~~~~d~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~l~~~-~g~~l~v~~~~~p~~~ 236 (297)
T 2cir_A 159 HTYFRIEDIEGTMVSNLAGMKLYDQLLK-ESYVDKHPVVTFNQETDVIYQNVSAERAIQIVDK-GVQIHTLKRYNLPDTV 236 (297)
T ss_dssp CCEEECSCGGGEEEESCTTCEEEETTTT-EEEECCSSSBCCSSCEEEEECCCCTTCCEEEEET-TEEEEEEEEESCCEEE
T ss_pred CceEeCCCccceEEecCCCCccEeccCC-ccccccCCccccCCccceEEeCCCCCccEEEEcC-CCCEEEEEecCCCcEE
Confidence 9999999877788887766557775432 222223456777789999997654 57889999 9999999998899999
Q ss_pred EeCCcccccccCCCC-CCCCCcceEEeceeeecCCeEeCCCCEEEEEEEEEEEe
Q 021887 236 VWNPWDKKAKALPDM-GVDGYKTMLCVDSAAIENPIVLKPFEEWRGRQELSTVS 288 (306)
Q Consensus 236 vw~p~~~~~~~~~d~-~~~~~~~~vCvEp~~~~g~~~L~pGe~~~~~~~i~~~~ 288 (306)
||||+.++++++.|+ ++.+|++|||||||+..+.++|+|||+++.+++|++..
T Consensus 237 v~t~~~~~~~~~~~~~~~~~~~~~vClEp~~~~~~~~L~pGe~~~~~~~~~~~~ 290 (297)
T 2cir_A 237 VWNPWIEKSQGMADFEPKTGYQQMICIEPGHVHDFISLAPGKKWNAYQLLCKEE 290 (297)
T ss_dssp EEECHHHHHHHCTTCCSTTGGGGEEEEEEEEEEEEEEECTTCEEEEEEEEECC-
T ss_pred EECcchhhccccccCCCccccccEEEECceECCCCEEECCCCeEEEEEEEEEEe
Confidence 999976556667776 56677899999999998999999999999999999964
No 2
>2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, MU YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A
Probab=100.00 E-value=1.6e-53 Score=388.96 Aligned_cols=268 Identities=31% Similarity=0.501 Sum_probs=233.7
Q ss_pred CCCccEEEEECCCccEEEEecCCeEEEEEEeCCCeeeEEecCCCCCCCCCcccCcccEEccccCCCC--CCCCceEEecc
Q 021887 9 KDGLPRIILTEPTGSSAEVLLYGGQVVSWKNERREELLFMSSKSFWKPPKAIRGGIPVCFPQFGNLG--LLEQHGFARNR 86 (306)
Q Consensus 9 ~~~~~~~~L~~~~~~~a~v~~~Ga~l~s~~~~~g~e~L~~~~~~~~~~~~~irgg~p~lfP~~gr~~--~~~~HGfar~~ 86 (306)
.++++.++|+|+. ++|+|.++||+|+||+.++|+|+||.++.+.|...+++|||+|+||||+||+. .+++|||+|++
T Consensus 38 ~~~~~~~~L~n~~-~~a~I~~~GA~l~s~~~~~g~evL~~~~~~~~~~~~~~~GG~pil~P~~gRi~~g~~~~HGfar~~ 116 (309)
T 2hta_A 38 LDDLDLIVVDHPQ-VKASFALQGAHLLSWKPVGEEEVLWLSNNTPFKTGVALRGGVPICWPWFGPAAQQGLPSHGFARNL 116 (309)
T ss_dssp ETTEEEEEEEETT-EEEEEETBTTEEEEEEETTSCCCBCBCTTCCCCTTCCCSBSBCEEBSCCSSCSSTTCCTTBSGGGS
T ss_pred cCCceEEEEeCCC-eEEEEeccCcEEEEEEeCCCCEEEeCCchHhccCCCCeeccceEEEecCCCCCCCCCCCccCcCCC
Confidence 7889999999995 99999999999999998656899999988889888999999999999999985 57999999999
Q ss_pred CcEEEeeCCCCCCCCCccEEEEEecCChhhhccCCCceEEEEEEEEeCCeEEEEEEEEeCCCCceeeeeeccccccCCCc
Q 021887 87 FWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDI 166 (306)
Q Consensus 87 ~W~v~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~~~~L~i~~~v~N~~~~~~p~~~g~HpYF~~~~~ 166 (306)
.|++++... +++..+|+|++.++++++++|||+|+++++|+| +++|+|+|+++| +|||++|+||||+++++
T Consensus 117 ~W~v~~~~~----~~~~~~v~l~l~s~~~~~~gyP~~~~l~vty~L-~~~L~i~~~~~N----~~~~~~g~H~YFnl~~~ 187 (309)
T 2hta_A 117 PWALKAHNE----DDNGVMLTFELQSSEATRKYWPHDFTLLARFKV-GKTCEIELEAHG----EFATTSALHSYFNVGDI 187 (309)
T ss_dssp BCEEEEEEE----CSSCEEEEEEEECCHHHHHHSCCCCEEEEEEEE-SSSEEEEEEEES----SEEEEEEECCEEECSCG
T ss_pred ceEEEeEec----CCCceEEEEEeCCChHHhhcCCCceEEEEEEEE-CCceEEEEEEEC----CeEehhcCCceEecCCc
Confidence 999987631 112367999999887888999999999999999 999999999998 89999999999999987
Q ss_pred ceEEEeccCCCccccccccccceeccCceeeecCccCeEEeCCCCeEEEEeCCCCcEEEEEecCCCcEEEeCCccccccc
Q 021887 167 SEVRVEGLETLDYFDYLMNKERFTEQADAITFDGEIDRVYLSTPTKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKA 246 (306)
Q Consensus 167 ~~~~~~~~~~~~~~d~l~~~~~~~~~~~~~~~~~~~D~~y~~~~~~~~l~~~~~~~~l~v~~~~~~~~vvw~p~~~~~~~ 246 (306)
.++++.++ +..|+|.++.+.........++|..++|++|.+....++|.++.++++|+|.++++|++|||||+.++++.
T Consensus 188 ~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~df~~~~D~~~~~~~~~~~l~~~~~g~~l~v~~~~~p~~~vwtp~~~~~~~ 266 (309)
T 2hta_A 188 ANVKVSGL-GDRFIDKVNDAKEGVLTDGIQTFPDRTDRVYLNPEACSVIHDATLNRTIDVVHHHHLNVVGWNPGPALSVS 266 (309)
T ss_dssp GGCEEECC-CSEEEETTTTTEEEECSSSCEECSSCEEEEESSCCSEEEEEETTTTEEEEEEEESCSEEEEEECHHHHHHH
T ss_pred cceEEECC-CCceEeccCCcccccccCCceecCCccCcEEeCCCCCEEEEeCCCCcEEEEEECCCCcEEEECCCcccccc
Confidence 77788766 55677765554433334567889899999998655678999999999999999889999999997666667
Q ss_pred CCCCCCCCCcceEEeceeeecCCeEeCCCCEEEEEEEEEEE
Q 021887 247 LPDMGVDGYKTMLCVDSAAIENPIVLKPFEEWRGRQELSTV 287 (306)
Q Consensus 247 ~~d~~~~~~~~~vCvEp~~~~g~~~L~pGe~~~~~~~i~~~ 287 (306)
+.|+++.++++|||||||+..+.++|+|||+++.+++|++.
T Consensus 267 ~~d~~~~~~~~~vClEp~~~~~~~~L~PGe~~~~~~~~~~~ 307 (309)
T 2hta_A 267 MGDMPDDGYKTFVCVETVYATAPQQATEEKPSRLAQTICVA 307 (309)
T ss_dssp CTTSCTTGGGGEEEEEEEEEEEEEEEBTTBCEEEEEEEEEE
T ss_pred cccCCccccccEEEECeeecCCCEEECCCCeEEEEEEEEEe
Confidence 88888878889999999999999999999999999999985
No 3
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP}
Probab=100.00 E-value=4.9e-52 Score=375.64 Aligned_cols=262 Identities=22% Similarity=0.402 Sum_probs=222.5
Q ss_pred eeeecCCCCccEEEEECCC-ccEEEEe-cCCeEEEEEEeCCCeeeEEecCCCCCCCCCcccCcccEEccccCCC------
Q 021887 3 LNIVHDKDGLPRIILTEPT-GSSAEVL-LYGGQVVSWKNERREELLFMSSKSFWKPPKAIRGGIPVCFPQFGNL------ 74 (306)
Q Consensus 3 ~~~~~~~~~~~~~~L~~~~-~~~a~v~-~~Ga~l~s~~~~~g~e~L~~~~~~~~~~~~~irgg~p~lfP~~gr~------ 74 (306)
+.+++..++++.++|+|++ |.+++|. ++||+|+||+.+ |+|+||.++.++++..+++|||+|+||||+||+
T Consensus 2 ~~~~~~~~~~~~~~l~n~~~g~~~~v~~~~Ga~l~s~~~~-g~~~l~~~~~~~~~~~~~~~gg~Pvl~P~~gri~~g~~~ 80 (289)
T 3k25_A 2 YNISFTPDRPLTYHLEDDQSLARLSLVPGRGGLVTEWTVQ-GQPILYFDRERFQDPSLSVRGGIPILFPICGNLPQDQFN 80 (289)
T ss_dssp EEEEEECCBCCEEEEEETTTTEEEEEEGGGTSEEEEEEET-TEECBCBCTTGGGSTTSCCCBSBCEEBSCSSCCGGGEEE
T ss_pred cceeeccCCceEEEEECCCCCeEEEeehhcCCEEEEEEeC-CEEEEecChhhccCcccccCCCCCEEECCCCCCCCCEEE
Confidence 5666668899999999985 8999996 999999999984 899999887777777788999999999999998
Q ss_pred -----CCCCCceEEeccCcEEEeeCCCCCCCCCccEEEEEecCChhhhccCCCceEEEEEEEEeCCeEEEEEEEEeCCCC
Q 021887 75 -----GLLEQHGFARNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVDNK 149 (306)
Q Consensus 75 -----~~~~~HGfar~~~W~v~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~~~~L~i~~~v~N~~~~ 149 (306)
|++++|||+|++.|++++.. +++..+|+|++.++++++++|||+|+++++|+|.+++|+++++++|++++
T Consensus 81 ~~g~~y~l~~HGf~r~~~W~~~~~~-----~~~~~~v~l~l~~~~~~~~~~P~~~~~~~~y~L~~~~L~i~~~~~N~~~~ 155 (289)
T 3k25_A 81 HAGKSYRLKQHGFARDLPWEVIGQQ-----TQDNARLDLRLSHNDATLEAFPFAFELVFSYQLQGHSLRIEQRIANLGDQ 155 (289)
T ss_dssp ETTEEEECCTTBSGGGSCCEEEEEE-----CSSSEEEEEEEECCHHHHTTSCSCEEEEEEEEEETTEEEEEEEEEECSSS
T ss_pred ECCEEeecCCCCCcccCCeEEEEec-----CCCCcEEEEEEecChhHHhcCCceEEEEEEEEEeCCEEEEEEEEEcCCCC
Confidence 46899999999999998763 22356899999988878899999999999999999999999999999999
Q ss_pred ceeeeeeccccccCCCcceEEEeccCCCccccccccccceeccCceeeec-CccCeEEeCC-CCeEEEEeCCCCcEEEEE
Q 021887 150 AFSFMFALRNYLSVSDISEVRVEGLETLDYFDYLMNKERFTEQADAITFD-GEIDRVYLST-PTKIAIIDHEKKRTFELR 227 (306)
Q Consensus 150 ~~p~~~g~HpYF~~~~~~~~~~~~~~~~~~~d~l~~~~~~~~~~~~~~~~-~~~D~~y~~~-~~~~~l~~~~~~~~l~v~ 227 (306)
+|||++|+||||++++..+++|+++. ..|+|.... ..... .+.+.+. .++|++|.+. .+.++|.++..+++|+|.
T Consensus 156 ~~~~~~~~H~yF~~~~~~~~~~~~~~-~~~~d~~~~-~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~l~~~~~~~~i~v~ 232 (289)
T 3k25_A 156 RMPFSLGFHPYFFCREKLGITLAIPA-NDYLDQKTG-DCHGY-DGQLNLTSPELDLAFTQISQPRAHFIDPDRNLKIEVS 232 (289)
T ss_dssp CEEECCEECCEEECSCCTTCEEECSC-SEEEETTTC-CEEEC-CSCCCTTSSEEEEEECCCSSSEEEEEETTTTEEEEEE
T ss_pred cceeEEecCcEEccCCcceEEEEcCc-ccccccccC-ccccc-CCcccCCchhhceEeecCCCCeEEEEECCCCCEEEEE
Confidence 99999999999999998889998764 456664322 11111 2334443 5889999876 357899999999999999
Q ss_pred ecC-CCcEEEeCCcccccccCCCCCCCCCcceEEeceeee--------cCCeEeCCCCEEEEEEEEEEE
Q 021887 228 KDG-MPDSVVWNPWDKKAKALPDMGVDGYKTMLCVDSAAI--------ENPIVLKPFEEWRGRQELSTV 287 (306)
Q Consensus 228 ~~~-~~~~vvw~p~~~~~~~~~d~~~~~~~~~vCvEp~~~--------~g~~~L~pGe~~~~~~~i~~~ 287 (306)
.++ ++++|||||. +++|||||||++ .+.++|+|||+++.+++|+++
T Consensus 233 ~~~~~~~~vvw~~~--------------~~~fvCvEP~~~~~da~n~~~~~~~L~PGe~~~~~~~i~v~ 287 (289)
T 3k25_A 233 FSELYQTLVLWTVA--------------GKDYLCLEPWSGPRNALNSGEQLAWVEPYSSRSAWVNFQVS 287 (289)
T ss_dssp ECTTCCEEEEEEES--------------SSCEEEEEEESSCTTHHHHCTTCEEECTTEEEEEEEEEEEE
T ss_pred eCCCCcEEEEEecC--------------CCCEEEEccccCCCCcccCCCCcEEECCCCeEEEEEEEEEE
Confidence 886 8999999974 368999999985 589999999999999999985
No 4
>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7
Probab=100.00 E-value=6.6e-52 Score=371.13 Aligned_cols=252 Identities=27% Similarity=0.501 Sum_probs=214.8
Q ss_pred CCCCccEEEEECCCccEEEEecCCeEEEEEEeC-CCeeeEEecCCCCCCCCCcccCcccEEccccCCCCCCCCceEEecc
Q 021887 8 DKDGLPRIILTEPTGSSAEVLLYGGQVVSWKNE-RREELLFMSSKSFWKPPKAIRGGIPVCFPQFGNLGLLEQHGFARNR 86 (306)
Q Consensus 8 ~~~~~~~~~L~~~~~~~a~v~~~Ga~l~s~~~~-~g~e~L~~~~~~~~~~~~~irgg~p~lfP~~gr~~~~~~HGfar~~ 86 (306)
..+|++.++|+|+. .+|+|.++||+|+||+.+ +|+|+||+++++.|+..++||||+|+||||+||+. +|+|||||++
T Consensus 17 ~~~~~~~~~l~~~~-~~a~i~~~Ga~l~s~~~~~~g~e~Lw~~~~~~~~~~~~irGGiPvlfP~~gr~~-~~~HGfaR~~ 94 (270)
T 1jov_A 17 QHNDIPVLHLKHAV-GTAKISLQGAQLISWKPQNAKQDVLWLSEVEPFKNGNAIRGGVPICYPWFGGVK-QPAHGTARIR 94 (270)
T ss_dssp EETTEEEEEEEETT-EEEEEETBTTEEEEEEETTCSSCSBCBCTTCCCCTTSCCSBSCCEEBSSCGGGS-SSTTBSGGGS
T ss_pred eeCCceEEEEeCCC-cEEEEECCCCEEEEEEECCCCceEEEECcHHhcCCCCCccCccEEEEeccCCCC-CCCCceecCC
Confidence 47889999999997 899999999999999975 47999999999999999999999999999999964 7999999999
Q ss_pred CcEEEeeCCCCCCCCCccEEEEEecCChhhhccCCCceEEEEEEEEeCCeEEEEEEEEeCCCCceeeeeeccccccCCCc
Q 021887 87 FWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDI 166 (306)
Q Consensus 87 ~W~v~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~~~~L~i~~~v~N~~~~~~p~~~g~HpYF~~~~~ 166 (306)
.|+|.++.. +++...++|.+.+++ +.|+++++|+|. |+++++|+|+|++ ||++|+||||+++++
T Consensus 95 ~W~v~~~~~----~~~~v~l~~~l~~~~-------~~f~l~~~~~L~---l~~~~~v~N~g~~--p~~~g~HpyF~v~d~ 158 (270)
T 1jov_A 95 LWQLSHYYI----SVHKVRLEFELFSDL-------NIIEAKVSMVFT---DKCHLTFTHYGEE--SAQAALHTYFNIGDI 158 (270)
T ss_dssp BCEEEEEEE----ETTEEEEEEEEECTT-------SCEEEEEEEEES---SSEEEEEEECCSS--CEEEEECCEEECSCG
T ss_pred CcEEeeecc----CCCcEEEEEEECCCc-------cccEEEEEEEEC---CeEEEEEEeCCch--hHhhhcccceecCCc
Confidence 999998731 123346677776532 358999999995 8999999999986 789999999999998
Q ss_pred ceEEEeccCCCccccccccccceeccCceeeecCccCeEEeCCCCeEEEEeCCCCcEEEEEecCCCcEEEeCCccccccc
Q 021887 167 SEVRVEGLETLDYFDYLMNKERFTEQADAITFDGEIDRVYLSTPTKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKA 246 (306)
Q Consensus 167 ~~~~~~~~~~~~~~d~l~~~~~~~~~~~~~~~~~~~D~~y~~~~~~~~l~~~~~~~~l~v~~~~~~~~vvw~p~~~~~~~ 246 (306)
++++|+++.. .|+|+++..... ..+.+.+..++|++|.++++.++|.+++.+++|+|..++++++||||||. +.
T Consensus 159 ~~~~v~g~~~-~~~d~l~~~~~~--~~~~~~~~~~~D~vy~~~~~~~~i~d~~~~~~i~v~~~~~~~~vvWnP~~---~~ 232 (270)
T 1jov_A 159 NQVEVQGLPE-TCFNSLNQQQEN--VPSPRHISENVDCIYSAENMQNQILDKSFNRTIALHHHNASQFVLWNPWH---KK 232 (270)
T ss_dssp GGEEEESCCS-EEEETTTTEEEE--CCSSBCCSSCEEEEEECSSSEEEEEETTTTEEEEEEEESCSEEEEEECTT---SC
T ss_pred ceEEEECCCC-cceeccCCcccc--cCCcccCCCCccceeCCCCCCEEEEECCCCcEEEEEEcCCCeEEEECCCc---cc
Confidence 8899998854 688876543322 33567788899999998877899999999999999999999999999974 46
Q ss_pred CCCCCCCCCcceEEeceeeecCCeEeCCCCEEEEEEEEE
Q 021887 247 LPDMGVDGYKTMLCVDSAAIENPIVLKPFEEWRGRQELS 285 (306)
Q Consensus 247 ~~d~~~~~~~~~vCvEp~~~~g~~~L~pGe~~~~~~~i~ 285 (306)
|+||+++++++||||||+.+ .+.|+|||+++.+++|+
T Consensus 233 ~~d~~~~~~~~fvCvEp~~~--~~~L~PGe~~~~~~~i~ 269 (270)
T 1jov_A 233 TSGMSETGYQKMLCLETARI--HHLLEFGESLSVEISLK 269 (270)
T ss_dssp CTTCCTTGGGGEEEEEEEEE--EEEECTTCEEEEEEEEC
T ss_pred ccccccccCccEEEeCcccc--ceEECCCCEEEEEEEEE
Confidence 89999989999999999765 67999999998887764
No 5
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei}
Probab=100.00 E-value=2.5e-45 Score=332.37 Aligned_cols=246 Identities=20% Similarity=0.330 Sum_probs=195.1
Q ss_pred EEEEECCCccEEEEecCCeEEEEEEeC-CCeeeEEecCCCCCCCCCcccCcccEEccccCCC-----------CCCCCce
Q 021887 14 RIILTEPTGSSAEVLLYGGQVVSWKNE-RREELLFMSSKSFWKPPKAIRGGIPVCFPQFGNL-----------GLLEQHG 81 (306)
Q Consensus 14 ~~~L~~~~~~~a~v~~~Ga~l~s~~~~-~g~e~L~~~~~~~~~~~~~irgg~p~lfP~~gr~-----------~~~~~HG 81 (306)
+++|+|+. ++|+|.++||+|+||+.+ +|+|+||+.++++|.. ++|+||||+||+ |++++||
T Consensus 2 ~~~l~n~~-~~~~i~~~Ga~l~s~~~~~~g~e~l~~~~~~~~~~------~~p~l~P~~~Ri~~g~~~~~G~~y~l~~HG 74 (294)
T 3q1n_A 2 MITIENSK-FKAGIAERGAELQSLVNKADNYEYVWTGDKTFWNR------HAPILFPSIGKSNQDQYRLGAKTYPMSQHG 74 (294)
T ss_dssp EEEEECSS-EEEEEETBTTEEEEEEETTTTEECBCCCCTTTCSC------SCCEEBSCCSCCGGGEEEETTEEEECCTTB
T ss_pred EEEEECCC-EEEEEEccCcEEEEEEeCCCCCEEEEcCChhhccC------CCCEEEeccCCcCCCEEEECCcEEccCCCC
Confidence 57899995 999999999999999974 5899999998888865 689999999998 5789999
Q ss_pred EEeccCcEEEeeCCCCCCCCCccEEEEEecCChhhhccCCCceEEEEEEEEeCCeEEEEEEEEeCCCCceeeeeeccccc
Q 021887 82 FARNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYL 161 (306)
Q Consensus 82 far~~~W~v~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~~~~L~i~~~v~N~~~~~~p~~~g~HpYF 161 (306)
|+|++.|++++. ++++|+|++.++++++++|||+|+++++|+|++++|+|+|+|+|+++++|||++|+||||
T Consensus 75 f~r~~~w~~~~~--------~~~~v~l~l~~~~~~~~~yP~~~~~~v~y~L~~~~L~i~~~~~N~~~~~~p~~~~~H~yF 146 (294)
T 3q1n_A 75 FARDYDFDVSDK--------SDSAVTFTQHQNAETLKKFPFEYTLAVTYMLTDGGLSVHYTVTNDDSKSMPFALGFHPAF 146 (294)
T ss_dssp SGGGSBCEEESC--------CSSEEEEEEECCHHHHHHSCCCEEEEEEEEEETTEEEEEEEEEECSSSCEEECEEECCEE
T ss_pred CccCcceEEEEc--------cCCEEEEEEEcCcchhhcCCeEEEEEEEEEEeCCEEEEEEEEEcCCCCceeeeEecCcEE
Confidence 999999999976 367899999988877899999999999999999999999999999999999999999999
Q ss_pred cCCC-----cc--eEEEeccC-CCccc--c--ccccccceec---cCceeeecC-ccCe-EE--eCC-CCeEEEEeCCCC
Q 021887 162 SVSD-----IS--EVRVEGLE-TLDYF--D--YLMNKERFTE---QADAITFDG-EIDR-VY--LST-PTKIAIIDHEKK 221 (306)
Q Consensus 162 ~~~~-----~~--~~~~~~~~-~~~~~--d--~l~~~~~~~~---~~~~~~~~~-~~D~-~y--~~~-~~~~~l~~~~~~ 221 (306)
+++. +. .+++.... ...++ | .++.+..+.. ....+.+.. .+|+ +| ... ...++|.+++++
T Consensus 147 nl~~~~~~~~~d~~l~~~a~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~l~~~~fd~d~~~~~~~~~~~~~l~~~~~g 226 (294)
T 3q1n_A 147 NVGLKADGSFDDYDLTVEPLNSPLQRFGIGPVPFRNGDVEDIPGAEGNRLPLTHDLLDGGLVILANSEIAKATLASPHHD 226 (294)
T ss_dssp ECCBCTTSSBCSCEEEEECCSSCCEEEEESSTTSEEEEEEECTTCBTTEEECCHHHHTTCCEEECCTTCCEEEEECTTCS
T ss_pred EcCCCCCCcccCEEEEEcCCcccceEEeeCCCCcCCCcccccccCCCceecCCHHHhcCCeEEEcCCCccEEEEEeCCCC
Confidence 9983 22 34554322 11122 2 2332222111 123344543 4553 33 222 347889999999
Q ss_pred cEEEEEecCCCcEEEeCCcccccccCCCCCCCCCcceEEeceeee--------------cCCeEeCCCCEEEEEEEEEE
Q 021887 222 RTFELRKDGMPDSVVWNPWDKKAKALPDMGVDGYKTMLCVDSAAI--------------ENPIVLKPFEEWRGRQELST 286 (306)
Q Consensus 222 ~~l~v~~~~~~~~vvw~p~~~~~~~~~d~~~~~~~~~vCvEp~~~--------------~g~~~L~pGe~~~~~~~i~~ 286 (306)
+.|+|.++++|+++||+|... ..+|||||||++ .|+++|+|||+++.+++|++
T Consensus 227 ~~l~v~~~~~p~l~iwt~~~~------------~~~~vciEP~tg~~Da~n~~~~~~~k~g~~~L~pGe~~~~~~~I~i 293 (294)
T 3q1n_A 227 HSITLDISDFPYLTIWSPEHK------------KAPFIAVEPFDGLPDQAGEPTDWYTKLGNTTLSAGANKQLALKVEL 293 (294)
T ss_dssp CCEEEECTTCSEEEEECCTTS------------CCSEEEEEEEESCCCBSSSCCBTTTCTTCEEECTTCEEEEEEEEEE
T ss_pred cEEEEEECCCCEEEEECcCCC------------CCCEEEEeCcCCCCCCCCCCCchhccCCCEEECCCCEEEEEEEEEE
Confidence 999999888999999998421 257999999974 36999999999999999987
No 6
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus}
Probab=100.00 E-value=3e-44 Score=326.92 Aligned_cols=248 Identities=19% Similarity=0.272 Sum_probs=195.8
Q ss_pred EEEEECCCccEEEEecCCeEEEEEEeC-CCeeeEEecCCCCCCCCCcccCcccEEccccCCC-----------CCCCCce
Q 021887 14 RIILTEPTGSSAEVLLYGGQVVSWKNE-RREELLFMSSKSFWKPPKAIRGGIPVCFPQFGNL-----------GLLEQHG 81 (306)
Q Consensus 14 ~~~L~~~~~~~a~v~~~Ga~l~s~~~~-~g~e~L~~~~~~~~~~~~~irgg~p~lfP~~gr~-----------~~~~~HG 81 (306)
.++|+|+. ++|+|.++||+|+||+.+ +|+|+||+.++++|.. ++|+||||+||+ |++++||
T Consensus 2 ~~~l~n~~-~~~~i~~~GA~l~s~~~~~~~~e~l~~~~~~~~~~------~~pil~P~~nRi~~g~~~~~G~~y~l~~HG 74 (307)
T 3dcd_A 2 DYTIENNM-IKVVISDHGAEIQSVKSAHTDEEFMWQANPEIWGR------HAPVLFPIVGRLKNDEYTYKGKTYHLGQHG 74 (307)
T ss_dssp EEEEECSS-EEEEEETBTTEEEEEEETTTCCBCBCCCCTTTCCC------SSCEEBSCSSCCGGGEEEETTEEEECCTTB
T ss_pred EEEEECCC-EEEEEEccCcEEEEEEECCCCcEEEECCChhhcCC------CCcEEEeecCccCCCeEEECCEEEecCCCC
Confidence 47899996 999999999999999974 5799999998888865 789999999998 4789999
Q ss_pred EEeccCcEEEeeCCCCCCCCCccEEEEEecCChhhhccCCCceEEEEEEEEeCCeEEEEEEEEeCCCCceeeeeeccccc
Q 021887 82 FARNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYL 161 (306)
Q Consensus 82 far~~~W~v~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~~~~L~i~~~v~N~~~~~~p~~~g~HpYF 161 (306)
|+|++.|++++.. +++|+|++.++++++++|||+|+++++|+|.+++|+|+++|+|+|+++|||++|+||||
T Consensus 75 f~r~~~w~v~~~~--------~~~v~l~l~~~~~~~~~yP~~~~~~v~y~L~~~~L~i~~~v~N~g~~~~p~~~g~HpyF 146 (307)
T 3dcd_A 75 FARNADFEVENHT--------KESITFLLKDNEETRKVYPFKFEFRVNYNLMNNLLEENFSVVNKSDETMIFGVGGHPGF 146 (307)
T ss_dssp SGGGSBCEEEEEE--------TTEEEEEEECCHHHHHHSCCCEEEEEEEEEETTEEEEEEEEEECSSSCEEECEEECCEE
T ss_pred CccCcEEEEEEec--------CCEEEEEEecCcchhhhCCCceEEEEEEEEeCCEEEEEEEEECCCCCcEeEEEEcCcEE
Confidence 9999999999873 56899999988788899999999999999999999999999999999999999999999
Q ss_pred cCCC-----cce--EEEeccCCCccccccccc-------cceeccCceeeecC-ccCe---EEeCCC--CeEEEEeCCCC
Q 021887 162 SVSD-----ISE--VRVEGLETLDYFDYLMNK-------ERFTEQADAITFDG-EIDR---VYLSTP--TKIAIIDHEKK 221 (306)
Q Consensus 162 ~~~~-----~~~--~~~~~~~~~~~~d~l~~~-------~~~~~~~~~~~~~~-~~D~---~y~~~~--~~~~l~~~~~~ 221 (306)
+++. +.+ +++........ ..++.+ ..+. ....+.++. .+|+ +|.+++ ..++|.+++++
T Consensus 147 ~~~~~~~~~~~d~~L~~~a~~~~~~-~~l~~g~~~~~~~~~~~-~~~~~~l~~~~fd~da~~~~~~~~~~~v~l~~~~~g 224 (307)
T 3dcd_A 147 NLPTDHGENKEDFYFDMHPSVTRVR-IPLKDASLDWNNRSLAP-TDSLIALSDDLFKDDALIYELRGNDNKVSLRTDKNK 224 (307)
T ss_dssp ECCCTTSCCGGGEEEEEESCCCEEE-CCEETTEECGGGCEEEC-TTSCEECCSGGGTTSCEEEECCSSCEEEEEEETTSS
T ss_pred EcCCCCCCccccEEEEEcCCCceee-eecCCcccccccccccc-cCCcccCCHHHcCCceEEEcCCCCceEEEEEeCCCC
Confidence 9984 233 44442211100 011111 0111 123344544 3542 344433 46889999999
Q ss_pred cEEEEEecCCCcEEEeCCcccccccCCCCCCCCCcceEEeceeee--------------cCCeEeCCCCEEEEEEEEEEE
Q 021887 222 RTFELRKDGMPDSVVWNPWDKKAKALPDMGVDGYKTMLCVDSAAI--------------ENPIVLKPFEEWRGRQELSTV 287 (306)
Q Consensus 222 ~~l~v~~~~~~~~vvw~p~~~~~~~~~d~~~~~~~~~vCvEp~~~--------------~g~~~L~pGe~~~~~~~i~~~ 287 (306)
+.|+|..+++|+++||+|.. +..+|||||||++ .|+++|+|||+++.+++|++.
T Consensus 225 ~~v~v~~~~fp~l~iwt~~~------------~~~~fvciEP~tg~~Da~n~~~~~~~k~gl~~L~PGe~~~~~~~i~~~ 292 (307)
T 3dcd_A 225 FHVNVWTRDAPFVGIWSQYP------------KTDNYVCIEPWWGIADRDDADGDLEHKYGMNHLKPGKEFQAGFSMTYH 292 (307)
T ss_dssp CEEEEEEETCSEEEEECCSS------------SCCSEEEEEEEESCCCBTTCCSBGGGCTTCEEECTTCEEEEEEEEEEE
T ss_pred cEEEEEECCCCEEEEECcCC------------CCCCEEEEccccCCCCCCCCCCchhccCCCEEECCCCEEEEEEEEEEE
Confidence 99999988899999999831 1257999999974 279999999999999999997
Q ss_pred ecC
Q 021887 288 SSS 290 (306)
Q Consensus 288 ~~~ 290 (306)
...
T Consensus 293 ~~~ 295 (307)
T 3dcd_A 293 STT 295 (307)
T ss_dssp CSS
T ss_pred ECC
Confidence 653
No 7
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis}
Probab=100.00 E-value=4.7e-44 Score=328.70 Aligned_cols=261 Identities=17% Similarity=0.208 Sum_probs=199.7
Q ss_pred CCCCccEEEEECCCccEEEEe-cCCeEEEEEEeC-CCeeeEEecCCCCCCCCCcccCcccEEccccCCC-----------
Q 021887 8 DKDGLPRIILTEPTGSSAEVL-LYGGQVVSWKNE-RREELLFMSSKSFWKPPKAIRGGIPVCFPQFGNL----------- 74 (306)
Q Consensus 8 ~~~~~~~~~L~~~~~~~a~v~-~~Ga~l~s~~~~-~g~e~L~~~~~~~~~~~~~irgg~p~lfP~~gr~----------- 74 (306)
.++|++.++|+|+. ++|+|. ++||+|+||+.+ .|+|+||..+.......+++++|+|+||| +||+
T Consensus 10 ~~~g~~~~~L~n~~-~~~~i~p~~GA~l~s~~~~~~g~~~l~~~~~~~~~~~~~~~~G~pv~~p-~nRi~~g~~~~~G~~ 87 (326)
T 3mwx_A 10 TYLGTPAIKAGNEH-LEMIVVPEWGSNVISLVDKTTNVQLLREPETAESFHDTPTLYGIPILFP-PNRISDGTFSFRGRT 87 (326)
T ss_dssp EETTEEEEEEEESS-EEEEEETTTTTEEEEEEETTTTEECBCCCSSHHHHHHCTTSSSCCEEBS-CSEEETTEEEETTEE
T ss_pred EECCeEEEEEECCC-EEEEEchhcCCEEEEEEecCCCceEEccCcChhHhhcCccccCceEcCC-CCcccCCEEEECCEE
Confidence 58899999999996 999999 799999999974 47999998754322224677889999999 6997
Q ss_pred CCCC---------CceEEeccCcEEEeeCCCCCCCCCccEEEEEe--cCChhhhccCCCceEEEEEEEEeCCeEEEEEEE
Q 021887 75 GLLE---------QHGFARNRFWSLDEDASPLPPANNQSTVDLIL--KSTEEDIKAWPRGFELRLRISISPGKLTLIPRV 143 (306)
Q Consensus 75 ~~~~---------~HGfar~~~W~v~~~~~~~~~~~~~~~v~l~l--~~~~~~~~~~P~~f~l~~~y~L~~~~L~i~~~v 143 (306)
|+++ +|||+|++.|+|++... +++..+|+|++ .+.++++++|||+|+++++|+|.+++|+|++++
T Consensus 88 y~l~~N~~~~~~~lHG~~~~~~W~v~~~~~----~~~~~~v~~~~~~~~~~~~~~g~P~~~~~~v~y~L~~~~L~i~~~~ 163 (326)
T 3mwx_A 88 YHFDINEKDKHNHLHGFLYHEKWNVVTTKQ----TDEGVIVETEIDLSELPHVQKQFPHHAVVRMTYTIKENTLFKHATV 163 (326)
T ss_dssp EECCCCBTTTTEEESBSCTTSCCEEEEEEE----ESSCEEEEEEEEGGGCHHHHHHSCSCEEEEEEEEEETTEEEEEEEE
T ss_pred EEccCCCCCCCccccCCccCCceEEEEeec----cCCceEEEEEEEeCCCCccccCCCceEEEEEEEEEcCCcEEEEEEE
Confidence 3455 59999999999987631 11234566555 445556779999999999999999999999999
Q ss_pred EeCCCCceeeeeeccccccCCCcceEEEeccCCCccc--c--ccccccce------eccCceeeecCccCeEEeCC----
Q 021887 144 RNVDNKAFSFMFALRNYLSVSDISEVRVEGLETLDYF--D--YLMNKERF------TEQADAITFDGEIDRVYLST---- 209 (306)
Q Consensus 144 ~N~~~~~~p~~~g~HpYF~~~~~~~~~~~~~~~~~~~--d--~l~~~~~~------~~~~~~~~~~~~~D~~y~~~---- 209 (306)
+|+++++|||++|+||||+++ +.+.+|... ...++ | .++.+... ......+.+..++|++|...
T Consensus 164 ~N~~~~~~~~~~~~H~yFnl~-~~~~~l~~~-a~~~~~~d~~~iptg~~~~~~~~~~~~~~~~~~~~~~D~~f~~~~~~~ 241 (326)
T 3mwx_A 164 MNKGKEAFPWGIGYHTTFIFP-AESSLFSLT-ADQQWELDERLLPTGKLMDVPYKEALHEGMDLRHKQLDDVFLSSYQKR 241 (326)
T ss_dssp EECSSSCEEECCEECCCEECC-TTTEEEEES-EEEEEEECTTSCEEEEEEECTTHHHHHHCBCCTTCCCEEEEEESHHHH
T ss_pred EECCCCceeeEEeeccccCCC-CCCEEEEEE-CCcEEEeCCccCCCCccccCcchhhcccCcccCCccccceeeeccccC
Confidence 999999999999999999998 555444321 11222 2 12222111 11112233456899999764
Q ss_pred --CCeEEEEeCCCCcEEEEEe-cCCCcEEEeCCcccccccCCCCCCCCCcceEEeceeee-------------cCCeEeC
Q 021887 210 --PTKIAIIDHEKKRTFELRK-DGMPDSVVWNPWDKKAKALPDMGVDGYKTMLCVDSAAI-------------ENPIVLK 273 (306)
Q Consensus 210 --~~~~~l~~~~~~~~l~v~~-~~~~~~vvw~p~~~~~~~~~d~~~~~~~~~vCvEp~~~-------------~g~~~L~ 273 (306)
...++|.++.++++|++.. +++|+++||+|+. ++.|||||||++ .+.++|+
T Consensus 242 ~~~~~~~l~~~~~g~~l~~~~~~~~p~~~vwt~~~-------------~~~~vclEP~~~~~da~n~~~~~~~~g~~~L~ 308 (326)
T 3mwx_A 242 GGENQAVIYHQHAHISIIYKADEQFKHWVVYNADG-------------KQGYLCPEPYTWVTNAVNLDLPSSLTGLQVLE 308 (326)
T ss_dssp CSCCEEEEEETTTTEEEEEEECTTCCEEEEECTTS-------------CSSEEEEEEESSCTTGGGCCSCHHHHCCEEEC
T ss_pred CCceEEEEEeCCCCEEEEEEeCCCCCEEEEECCCC-------------CCCEEEECCccCCCCccccCCCccccCCeEEC
Confidence 2478999999999999986 4799999999852 357999999983 3689999
Q ss_pred CCCEEEEEEEEEEEec
Q 021887 274 PFEEWRGRQELSTVSS 289 (306)
Q Consensus 274 pGe~~~~~~~i~~~~~ 289 (306)
|||+++.+++|+++..
T Consensus 309 PGe~~~~~~~i~~~~~ 324 (326)
T 3mwx_A 309 PGEETTAKSSITIELN 324 (326)
T ss_dssp TTCEEEEEEEEEEEEC
T ss_pred CCCeEEEEEEEEEEec
Confidence 9999999999999754
No 8
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli}
Probab=100.00 E-value=2.4e-43 Score=318.74 Aligned_cols=246 Identities=14% Similarity=0.163 Sum_probs=196.5
Q ss_pred CccEEEEECCCccEEEEecC-CeEEEEEEeCCCeeeEEecCCCCCCCCCcccCcccEEccccCCC-----------C---
Q 021887 11 GLPRIILTEPTGSSAEVLLY-GGQVVSWKNERREELLFMSSKSFWKPPKAIRGGIPVCFPQFGNL-----------G--- 75 (306)
Q Consensus 11 ~~~~~~L~~~~~~~a~v~~~-Ga~l~s~~~~~g~e~L~~~~~~~~~~~~~irgg~p~lfP~~gr~-----------~--- 75 (306)
|++.++|+|+. ++|+|..+ ||+|+|| . +|+|+||..++. .+++++|.|+||||+||+ |
T Consensus 1 g~~~~~l~n~~-~~~~i~~~~Ga~l~s~-~-~g~~vl~~~~~~----~~~~~~~g~~l~p~~nRi~~g~~~~~G~~y~l~ 73 (291)
T 3nre_A 1 GMTIYTLSHGS-LKLDVSDQGGVIEGFW-R-DTTPLLRPGKKS----GVATDASCFPLVPFANRVSGNRFVWQGREYQLQ 73 (291)
T ss_dssp CCCEEEEEETT-EEEEEETBTTEEEEEE-E-TTEESSCCCCCS----SCGGGSSEEEEBSCCSBCGGGEEEETTEEEECC
T ss_pred CccEEEEcCCC-EEEEEEcccCceEEEE-e-CCCEEEECCCcc----cCccccCCcEEEeeCCEecCCEEEECCEEEECC
Confidence 57889999995 99999985 9999999 5 589999987632 567889999999999998 1
Q ss_pred ------CCCCceEEeccCcEEEeeCCCCCCCCCccEEEEEecCChhhhccCCCceEEEEEEEEeCCeEEEEEEEEeCCCC
Q 021887 76 ------LLEQHGFARNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVDNK 149 (306)
Q Consensus 76 ------~~~~HGfar~~~W~v~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~~~~L~i~~~v~N~~~~ 149 (306)
..++|||+|++.|++++.. +++|+|++.+ + + |||+|+++++|+|++++|+|+|+++|++++
T Consensus 74 ~N~~~~~~~~HG~~~~~~W~~~~~~--------~~~v~l~l~~-~---~-~P~~~~~~v~y~L~~~~L~i~~~~~N~~~~ 140 (291)
T 3nre_A 74 PNVEWDAHYLHGDGWLGEWQCVSHS--------DDSLCLVYEH-R---S-GVYHYRVSQAFHLTADTLTVTLSVTNQGAE 140 (291)
T ss_dssp CCSTTCSSCBSBSGGGSBCEEEEEC--------SSEEEEEEEE-E---S-SSCEEEEEEEEEECSSEEEEEEEEEECSSS
T ss_pred CCCCCCCCCCCCchhcceeEEEEcc--------CCEEEEEEeC-C---C-CCceEEEEEEEEEeCCeEEEEEEEEECCCC
Confidence 3479999999999999873 5679999875 2 5 999999999999999999999999999999
Q ss_pred ceeeeeeccccccCCCcceEEEeccCCCccc--c--ccccccceeccCceeeec-------CccCeEEeCCCCeEEEEeC
Q 021887 150 AFSFMFALRNYLSVSDISEVRVEGLETLDYF--D--YLMNKERFTEQADAITFD-------GEIDRVYLSTPTKIAIIDH 218 (306)
Q Consensus 150 ~~p~~~g~HpYF~~~~~~~~~~~~~~~~~~~--d--~l~~~~~~~~~~~~~~~~-------~~~D~~y~~~~~~~~l~~~ 218 (306)
+|||++|+||||++++...+++.+ ..|+ | .++.+... ..+..++|. .++|++|......++|.++
T Consensus 141 ~~~~~~~~H~YFnl~~~~~l~i~a---~~~~~~d~~~iPtg~~~-v~~t~~df~~~~~l~~~~~D~~f~~~~~~a~l~~~ 216 (291)
T 3nre_A 141 TLPFGTGWHPYFPLSPQTRIQAQA---SGYWLEREQWLAGEFCE-QLPQELDFNQPAPLPRQWVNNGFAGWNGQARIEQP 216 (291)
T ss_dssp CEEECCEEEEEEECCTTCEEEECC---SEEEEECGGGCEEEEES-SCCGGGCCSSCEECCSSCEEEEEESCCSEEEEEEG
T ss_pred CccceEEcCccEecCCCeEEEEEC---CEEEEcCCCcCCCcccc-CCCCcccccCCcCCCCccccceeecCCccEEEEEC
Confidence 999999999999999877777753 2333 2 23333221 122334443 3799999987778999999
Q ss_pred CCCcEEEEEecC-CCcEEEeCCcccccccCCCCCCCCCc-ceEEeceeee----------cCCeEeCCCCEEEEEEEEEE
Q 021887 219 EKKRTFELRKDG-MPDSVVWNPWDKKAKALPDMGVDGYK-TMLCVDSAAI----------ENPIVLKPFEEWRGRQELST 286 (306)
Q Consensus 219 ~~~~~l~v~~~~-~~~~vvw~p~~~~~~~~~d~~~~~~~-~~vCvEp~~~----------~g~~~L~pGe~~~~~~~i~~ 286 (306)
.++++|+|.++. .|.+|||||+... +..++ .+||||||++ .+.++|+|||+++.+++|++
T Consensus 217 ~~g~~l~v~t~~p~~~~~vyt~~~~~--------~~~~~~~~vclEp~~~~pda~n~~~~~~~~~L~PGe~~~~~~~~~~ 288 (291)
T 3nre_A 217 QEGYAIIMETTPPAPCYFIFVSDPAF--------DKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPGESTTSEMSLRV 288 (291)
T ss_dssp GGTEEEEEEEESCCSEEEEEECCTTT--------CTTCCSCEEEEEEESSCTTGGGSGGGTTCEEECTTCEEEEEEEEEE
T ss_pred CCCeEEEEEeCCCCceEEEEcCCCCC--------CCCccCCEEEEcCccCCCCCCcCCCCCCCEEECCCCEEEEEEEEEE
Confidence 999999999873 2248999997311 12244 8999999973 15899999999999999998
Q ss_pred Ee
Q 021887 287 VS 288 (306)
Q Consensus 287 ~~ 288 (306)
.+
T Consensus 289 ~~ 290 (291)
T 3nre_A 289 EW 290 (291)
T ss_dssp EE
T ss_pred Ee
Confidence 65
No 9
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum}
Probab=100.00 E-value=1.1e-43 Score=328.08 Aligned_cols=260 Identities=20% Similarity=0.280 Sum_probs=199.8
Q ss_pred cCCCCccEEEEECCCccEEEEe-cCCeEEEEEEeC-CCeeeEEecCC-----CCCCCCCcccCcccEEccccCCC-----
Q 021887 7 HDKDGLPRIILTEPTGSSAEVL-LYGGQVVSWKNE-RREELLFMSSK-----SFWKPPKAIRGGIPVCFPQFGNL----- 74 (306)
Q Consensus 7 ~~~~~~~~~~L~~~~~~~a~v~-~~Ga~l~s~~~~-~g~e~L~~~~~-----~~~~~~~~irgg~p~lfP~~gr~----- 74 (306)
..++|++.++|+|+. ++|+|. ++||+|+||+.+ .|+|+||..+. .++ .+++++|+|+||| +|||
T Consensus 13 ~~~~g~~~~~L~n~~-~~~~i~p~~Ga~l~s~~~~~~g~~~l~~~~~~~~~~~y~--~~~~~~G~pv~~p-~nRi~~g~f 88 (341)
T 3os7_A 13 IIWSEHKCIRFAAGG-YEALIIPDVGGNVVELKDTNKGVTILRTPKKDLKFEDFK--NRPQVYGLPVLFP-PNRIDDGTF 88 (341)
T ss_dssp EETTTEEEEEEEETT-EEEEEETTTTTEEEEEEETTTTEECBCCCCTTCCHHHHH--HSGGGSSCCEESS-CSEEETTEE
T ss_pred EEECCEEEEEEeCCC-EEEEEchhcCCEEEEEEeCCCCCeEEEcCCcccchhhhh--hCCcccceeEeCC-CCcccCCEE
Confidence 358899999999995 999997 999999999975 47999998875 333 4788999999999 5886
Q ss_pred ------CCCC---------CceEEeccCcEEEeeCCCCCCCCCccEE--EEEecCChhhhccCCCceEEEEEEEEeCCeE
Q 021887 75 ------GLLE---------QHGFARNRFWSLDEDASPLPPANNQSTV--DLILKSTEEDIKAWPRGFELRLRISISPGKL 137 (306)
Q Consensus 75 ------~~~~---------~HGfar~~~W~v~~~~~~~~~~~~~~~v--~l~l~~~~~~~~~~P~~f~l~~~y~L~~~~L 137 (306)
|+++ +|||+|++.|+|++... +++..+| +|.+.+.++++++|||+|+++++|+|.+++|
T Consensus 89 ~~~G~~y~l~~N~~~~~~~lHG~~~~~~W~v~~~~~----~~~~~~v~~~~~~~d~~~~~~g~P~~~~~~v~y~L~~~~L 164 (341)
T 3os7_A 89 KLGDKTYKFPINEAKNNNYIHGFIKNSKWTVHKKKI----DQDKALVEVVFDFTKENEAYKYFSHEFQFKLSYELSSKGL 164 (341)
T ss_dssp EETTEEEECCCSBTTTTEEESCSGGGSCCEEEEEEE----ETTEEEEEEEEEECTTSTTTTTSCCCEEEEEEEEEETTEE
T ss_pred EECCEEEEccCCCCCCCcCccCCcccCcEEEEEeec----CCCccEEEEEEEeCCCcchhhcCCceEEEEEEEEEeCCeE
Confidence 3444 69999999999987631 1123355 4445555566779999999999999999999
Q ss_pred EEEEEEEeCCCCceeeeeeccccccCC-----CcceEEEeccCCCccc--c--cccccc-------ceecc-CceeeecC
Q 021887 138 TLIPRVRNVDNKAFSFMFALRNYLSVS-----DISEVRVEGLETLDYF--D--YLMNKE-------RFTEQ-ADAITFDG 200 (306)
Q Consensus 138 ~i~~~v~N~~~~~~p~~~g~HpYF~~~-----~~~~~~~~~~~~~~~~--d--~l~~~~-------~~~~~-~~~~~~~~ 200 (306)
+|+++++|+++++|||++|+||||+++ ++.+.+|.. ....++ | .++.+. .+... ...+....
T Consensus 165 ~i~~~~~N~~~~~~p~~~~~H~yF~l~~~~~~~~~~~~l~~-~a~~~~~~d~~~iPtG~~~~v~~~~~df~~~~~~~~~~ 243 (341)
T 3os7_A 165 KQTTSVVNLSSEEMPLSVGYHSAFNVPFIEGSEDSNCRVKI-SIDKFWKQDSRNLPTGESFAPTGEQKEYLENGVAVASH 243 (341)
T ss_dssp EEEEEEEECSSSCEEECCEECCEEESSCBTTCCGGGEEEEE-CEEEEEEECTTSCEEEEEECCCGGGGGGGTTCBCTTSS
T ss_pred EEEEEEEeCCCCcEEEEEecCceeecCCCCCCCcccEEEEE-eCCcEEecCcccCCCCccccCCCccchhhcCCcccCCc
Confidence 999999999999999999999999998 344555542 122232 2 222221 11111 12233456
Q ss_pred ccCeEEeCC----C----CeEEEEeCCCCcEEEEEe-cCCCcEEEeCCcccccccCCCCCCCCCcceEEeceeee-----
Q 021887 201 EIDRVYLST----P----TKIAIIDHEKKRTFELRK-DGMPDSVVWNPWDKKAKALPDMGVDGYKTMLCVDSAAI----- 266 (306)
Q Consensus 201 ~~D~~y~~~----~----~~~~l~~~~~~~~l~v~~-~~~~~~vvw~p~~~~~~~~~d~~~~~~~~~vCvEp~~~----- 266 (306)
++|++|... . ..++|.++.++++|+|.+ +++|++|||+|+. .++|||||||++
T Consensus 244 ~~D~~f~~~~~~~~g~~~~~~~l~~~~~g~~l~v~~~~~~p~~~vwt~~~-------------~~~~vclEP~~~~pDa~ 310 (341)
T 3os7_A 244 PIESLFSLKDIDVNGKTFRGACIEDASKNTRVVYEMSSEYKYLVIWNDMG-------------DKKYACIEPQTSIINSP 310 (341)
T ss_dssp CCEEEEEECCEEETTEEECEEEEEEGGGTEEEEEEECTTCCEEEEECGGG-------------CSSEEEEEEESSCTTGG
T ss_pred chhhhccccccccCCCcceEEEEEeCCCCeEEEEEeCCCCCEEEEEcCCC-------------CCCEEEECCccCCCCcc
Confidence 899999754 2 358899999999999998 4799999999862 357999999963
Q ss_pred --------cCCeEeCCCCEEEEEEEEEEEe
Q 021887 267 --------ENPIVLKPFEEWRGRQELSTVS 288 (306)
Q Consensus 267 --------~g~~~L~pGe~~~~~~~i~~~~ 288 (306)
.+.++|+|||+++.+++|+++.
T Consensus 311 n~~~~~~~~g~~~L~PGe~~~~~~~i~v~~ 340 (341)
T 3os7_A 311 NVKLDRSVSGFKTLKPNESWSGVCKLYIEN 340 (341)
T ss_dssp GCSSCHHHHCCEEECTTCEEEEEEEEEEEE
T ss_pred CCCCcccccCceEECCCCEEEEEEEEEEEe
Confidence 2789999999999999999875
No 10
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-41 Score=311.26 Aligned_cols=267 Identities=12% Similarity=0.133 Sum_probs=194.0
Q ss_pred ecCCCCccEEEEECCCccEEEEecCCeEEEEEEeCCCeeeEE-ecCCCCCCCCCcccCcccEEccccCCC----------
Q 021887 6 VHDKDGLPRIILTEPTGSSAEVLLYGGQVVSWKNERREELLF-MSSKSFWKPPKAIRGGIPVCFPQFGNL---------- 74 (306)
Q Consensus 6 ~~~~~~~~~~~L~~~~~~~a~v~~~Ga~l~s~~~~~g~e~L~-~~~~~~~~~~~~irgg~p~lfP~~gr~---------- 74 (306)
.++.+++..++|+|+++++|+|..+||+|+||+.+ |+|+|| .++.+.|....+++|+ +++||+||+
T Consensus 4 ~~~~~~~~~~~l~n~~~~~~~i~~~GA~l~s~~~~-g~~vl~~~~~~~~y~~~~~~~G~--~l~p~~nRi~~g~f~~~G~ 80 (342)
T 1yga_A 4 SNGDNKYGVITIGDEKKFQATIAPLGATLVDLKVN-GQSVVQGYSNVQDYLTDGNMMGA--TVGRYANRIAKGVFSLDDG 80 (342)
T ss_dssp ---CCTTCCEEEEETTTEEEEEETBTTEEEEEEET-TEECBCCCSSGGGGTTCSSCTTC--EECSBCSEEGGGEEEETTE
T ss_pred CCCCceEEEEEEECCCCEEEEEECCCCEEEEEEEC-CeeEEecCCChHHhccCCCeEcc--EECCCCCceeCCEEEECCE
Confidence 35567789999999756999999999999999985 799886 4444555555566643 677999998
Q ss_pred -CCCC-------CceEE---eccCcEEEeeCCCCCCCCCccEEEEEecCC--hhhhccCCCceEEEEEEEEeC--CeEEE
Q 021887 75 -GLLE-------QHGFA---RNRFWSLDEDASPLPPANNQSTVDLILKST--EEDIKAWPRGFELRLRISISP--GKLTL 139 (306)
Q Consensus 75 -~~~~-------~HGfa---r~~~W~v~~~~~~~~~~~~~~~v~l~l~~~--~~~~~~~P~~f~l~~~y~L~~--~~L~i 139 (306)
|+++ +|||+ |++.|++++... .+.++++|+|++.+. +++++.|||+|+++++|+|.+ ++|+|
T Consensus 81 ~y~l~~n~~~~~lHG~~~g~~~~~W~v~~~~~---~~~~~~~v~l~l~~~~~~~g~~~yP~~~~~~vty~L~~~~~~L~i 157 (342)
T 1yga_A 81 PHKLTVNNCGNTNHSSISSLNLKQYKASPVEN---PSKGVYVVEFKLLDDHTQPNPNEFPGDLEVTVKYTLNVAEMTLDM 157 (342)
T ss_dssp EEECCCCBTTBEETTGGGCGGGSBCEECCCEE---EETTEEEEEEEEEECSSSSSCCCSSSEEEEEEEEEEETTTTEEEE
T ss_pred EEEcCCCCCCcccCCCccccCcceeeeEEeec---cCCCCCEEEEEEECCcccCCCcCCCeEEEEEEEEEEeCCCCEEEE
Confidence 3454 59999 689999975410 000256788988864 233344999999999999984 89999
Q ss_pred EEEEEeCCCCceeeeeeccccccCC------CcceEEEeccCCCccc--cc---cccccceeccCceeee------cC--
Q 021887 140 IPRVRNVDNKAFSFMFALRNYLSVS------DISEVRVEGLETLDYF--DY---LMNKERFTEQADAITF------DG-- 200 (306)
Q Consensus 140 ~~~v~N~~~~~~p~~~g~HpYF~~~------~~~~~~~~~~~~~~~~--d~---l~~~~~~~~~~~~~~~------~~-- 200 (306)
+|+++|+++++|||++|+||||+++ ++.+.+|. +....|+ |. ++.+.........++| ..
T Consensus 158 ~~~~~N~~d~~~p~~~~~H~YFnl~~~~~~~~i~~~~l~-l~a~~~~~~d~~~~iPtg~~~~v~~~~~df~~~~~l~~~~ 236 (342)
T 1yga_A 158 EYQAQLVRGDATPINMTNHSYFNLNKVKSEKSIRGTEVK-VCSNKSLEVTEGALLPTGKIIERNIATFDSTKPTVLHEDT 236 (342)
T ss_dssp EEEEEEEESSEEECBCEECCCBCTTTTTCTTCCTTEEEE-ESCCEEEEECTTTCCEEEEEEECSCCBTTCSSCEEECSSC
T ss_pred EEEEEeCCCCceEEeeeccceEEcCCCCCCCcccceEEE-EeCCeEEEECCCCCCcCCCeEecCCCcccccCCeecCccc
Confidence 9999999999999999999999998 24455555 3334454 32 3333221112222333 32
Q ss_pred -ccCeEEeCCC----------------CeEEEEeCCCCcEEEEEecCCCcEEEeCCcccccccCCCCCCCCCcceEEece
Q 021887 201 -EIDRVYLSTP----------------TKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKALPDMGVDGYKTMLCVDS 263 (306)
Q Consensus 201 -~~D~~y~~~~----------------~~~~l~~~~~~~~l~v~~~~~~~~vvw~p~~~~~~~~~d~~~~~~~~~vCvEp 263 (306)
++|++|.... ..++|.++.+++.|+|.++ +|++|||||+. +.+ ....+.||||||
T Consensus 237 ~~~D~~f~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~g~~l~v~~~-~p~~~vyt~~~-----~~~--~y~~~~~vclEp 308 (342)
T 1yga_A 237 PVFDCTFIIDANKDLKTTDSVSVNKLVPVFKAYHPESHIKFEVSTT-EPTVHLYTGDN-----LCG--KFVPRSGFAVQQ 308 (342)
T ss_dssp CCCEEEEECTTTTTCCSSBCTTTSCCEEEEEEECTTTCCEEEEEES-SSEEEEECCTT-----CCT--TSCTTSCBEEEE
T ss_pred CCCCcEEEeCCCccccccccccccccceEEEEEeCCCCeEEEEEeC-CCEEEEECCCC-----ccc--cCCCCCEEEEEC
Confidence 6999997542 3578889999999999998 99999999863 100 112368999999
Q ss_pred eeec---------CCeEeCCCCEEEEEEEEEEE
Q 021887 264 AAIE---------NPIVLKPFEEWRGRQELSTV 287 (306)
Q Consensus 264 ~~~~---------g~~~L~pGe~~~~~~~i~~~ 287 (306)
+... ++++|+|||+++.+++|+|.
T Consensus 309 ~~~pda~n~~~~~~~~~L~pGe~~~~~~~~~f~ 341 (342)
T 1yga_A 309 GRYVDAINRDEWRGCVLLKRGEVYTSKTQYKFD 341 (342)
T ss_dssp ESCSSGGGCHHHHGGGEEETTCCEEEEEEEEEE
T ss_pred CCCCCcccCCCCCCCeEECCCCEEEEEEEEEEE
Confidence 8642 34899999999999999874
No 11
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A*
Probab=100.00 E-value=9.5e-40 Score=302.04 Aligned_cols=260 Identities=14% Similarity=0.203 Sum_probs=188.8
Q ss_pred CCccEEEEECCCccEEEEecCCeEEEEEEe--CCC--eeeEEe-cCCCCCCCCCcccCcccEEccccCCC----------
Q 021887 10 DGLPRIILTEPTGSSAEVLLYGGQVVSWKN--ERR--EELLFM-SSKSFWKPPKAIRGGIPVCFPQFGNL---------- 74 (306)
Q Consensus 10 ~~~~~~~L~~~~~~~a~v~~~Ga~l~s~~~--~~g--~e~L~~-~~~~~~~~~~~irgg~p~lfP~~gr~---------- 74 (306)
+++..++|+|+ +++|+|.++||+|+||+. ++| .|+||. ++.+.|....+.+| ++||||+||+
T Consensus 19 ~~~~~~~L~n~-~~~~~i~~~GA~l~s~~~~~~~G~~~~vv~g~~~~~~y~~~~~~~G--~~l~p~~nRi~~g~f~~~G~ 95 (344)
T 1snz_A 19 GTVEKFQLQSD-LLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQPYFG--AVIGRVANRIAKGTFKVDGK 95 (344)
T ss_dssp EEEEEEEEECS-SCEEEEETBTTEEEEEEEECTTSCEEECBCCCSSHHHHHSSCSCTT--CEECSBCSEEGGGEEEETTE
T ss_pred cEEEEEEEEcC-CEEEEEecCCcEEEEEEecCCCCCEeeEEECCCChHHHhhCCCcee--eEecCcCCcccCCEEEECCE
Confidence 44788999999 699999999999999986 235 388874 33333333344554 3799999998
Q ss_pred -CCCC-------CceEEe---ccCcEEEeeCCCCCCCCCccEEEEEecCChhhhccCCCceEEEEEEEEeCCeEEEEEEE
Q 021887 75 -GLLE-------QHGFAR---NRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISPGKLTLIPRV 143 (306)
Q Consensus 75 -~~~~-------~HGfar---~~~W~v~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~~~~L~i~~~v 143 (306)
|+++ +|||+| ++.|++++. + ++|+|++.+.+ +.++|||+|+++++|+|++++|+|+|++
T Consensus 96 ~y~L~~N~~~~~lHG~~~g~~~~~W~v~~~--------~-~~v~l~l~~~~-~~~gyP~~~~~~vty~L~~~~L~i~~~a 165 (344)
T 1snz_A 96 EYHLAINKEPNSLHGGVRGFDKVLWTPRVL--------S-NGVQFSRISPD-GEEGYPGELKVWVTYTLDGGELIVNYRA 165 (344)
T ss_dssp EEECCCTBTTBEETTSSSCGGGSBCEEEEE--------T-TEEEEEEEECT-TGGGCCSCEEEEEEEEEETTEEEEEEEE
T ss_pred EEECCCCCCCcccCCCccccccceeeEEEe--------C-CEEEEEEECCC-cCCCCCEEEEEEEEEEEcCCEEEEEEEE
Confidence 3455 999995 899999876 2 56899988754 5789999999999999999899999999
Q ss_pred EeCCCCceeeeeeccccccCCC-----cceEEEeccCCCccc--c--ccccccceeccCceeeecC--------------
Q 021887 144 RNVDNKAFSFMFALRNYLSVSD-----ISEVRVEGLETLDYF--D--YLMNKERFTEQADAITFDG-------------- 200 (306)
Q Consensus 144 ~N~~~~~~p~~~g~HpYF~~~~-----~~~~~~~~~~~~~~~--d--~l~~~~~~~~~~~~~~~~~-------------- 200 (306)
+| +++|||++|+||||+++. +.+.+|. +....|+ | .++.+.........++|..
T Consensus 166 ~~--d~~~p~~~~~H~YFnl~~~~~~~i~~~~L~-i~a~~~~~~d~~~iPtg~~~~v~~t~~df~~~~~l~~~~~~~~~~ 242 (344)
T 1snz_A 166 QA--SQATPVNLTNHSYFNLAGQASPNINDHEVT-IEADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGKHLQDFHLN 242 (344)
T ss_dssp EE--SSCEECBCEECCCBCTTCTTCSCCTTCEEE-ECEEEECCBCTTSCBCSCCEECTTSTTCCSSCEEHHHHHHHTTCC
T ss_pred Ee--CCceEEeccccceEecCCCCCCcccCEEEE-EECCeEEEeCCCCcccCceecCCCCcccccCCcCcChhhcccccC
Confidence 97 899999999999999984 3444443 2222333 2 2333322211222233332
Q ss_pred ccCeEEeCCC-----CeEEEEeCCCCcEEEEEecCCCcEEEeCCcccccccCCCCCCCC--CcceEEeceeeec------
Q 021887 201 EIDRVYLSTP-----TKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKALPDMGVDG--YKTMLCVDSAAIE------ 267 (306)
Q Consensus 201 ~~D~~y~~~~-----~~~~l~~~~~~~~l~v~~~~~~~~vvw~p~~~~~~~~~d~~~~~--~~~~vCvEp~~~~------ 267 (306)
++|++|.... ..++|.++.+++.|+|.++ +|++|||||+.... .+.++.+.. .+.|||||||...
T Consensus 243 g~D~~f~~~~~~~~~~~a~l~~~~sg~~l~v~t~-~p~~~vyt~~~~~~-~~~~~~~~~y~~~~~vclEp~~~pda~n~~ 320 (344)
T 1snz_A 243 GFDHNFCLKGSKEKHFCARVHHAASGRVLEVYTT-QPGVQFYTGNFLDG-TLKGKNGAVYPKHSGFCLETQNWPDAVNQP 320 (344)
T ss_dssp CCEEEEEECCCSSCEEEEEEEETTTTEEEEEEES-SSEEEEECCTTCEE-EEECGGGCEEETTSCBEEEEESCTTGGGCT
T ss_pred CCCeEEEccCCCCCceEEEEEeCCCCcEEEEEeC-CCeEEEECCCCCCc-cccCCCCcccCCCCEEEEeCcCCCCcccCC
Confidence 4899996532 2578999999999999998 99999999841100 011121111 2579999999642
Q ss_pred --CCeEeCCCCEEEEEEEEEEE
Q 021887 268 --NPIVLKPFEEWRGRQELSTV 287 (306)
Q Consensus 268 --g~~~L~pGe~~~~~~~i~~~ 287 (306)
+.++|+|||+++.+++|+|.
T Consensus 321 ~~~~~~L~pGe~~~~~~~~~f~ 342 (344)
T 1snz_A 321 RFPPVLLRPGEEYDHTTWFKFS 342 (344)
T ss_dssp TSCCCEECTTSCEEEEEEEEEE
T ss_pred CCCCeEECCCCEEEEEEEEEEE
Confidence 67899999999999999985
No 12
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A*
Probab=100.00 E-value=1.2e-37 Score=287.96 Aligned_cols=257 Identities=16% Similarity=0.238 Sum_probs=186.1
Q ss_pred CccEEEEECCCccEEEEecCCeEEEEEEeCCCeeeEEecCC-CCCCCCCcccCcccEEccccCCC-----------CCCC
Q 021887 11 GLPRIILTEPTGSSAEVLLYGGQVVSWKNERREELLFMSSK-SFWKPPKAIRGGIPVCFPQFGNL-----------GLLE 78 (306)
Q Consensus 11 ~~~~~~L~~~~~~~a~v~~~Ga~l~s~~~~~g~e~L~~~~~-~~~~~~~~irgg~p~lfP~~gr~-----------~~~~ 78 (306)
.+..++|+|+++++|+|..+||.|+||+. +|+++||..+. +.|....+.+| +++|||+||| |+++
T Consensus 11 ~~~~~tL~n~~~~~v~i~~~GA~l~sl~~-~G~~vvlg~~~~~~y~~~~~~~G--~~lgp~anRI~~g~f~~~G~~y~L~ 87 (347)
T 1nsx_A 11 GSDLISLTNKAGVTISFTNLGARIVDWQK-DGKHLILGFDSAKEYLEKDAYPG--ATVGPTAGRIKDGLVKISGKDYILN 87 (347)
T ss_dssp TEEEEEEECTTSCEEEEETBTTEEEEEEE-TTEESBCCCSSHHHHHHTCSCTT--CEECSBCSEEGGGEEEETTEEEECC
T ss_pred eeEEEEEECCCceEEEEEccCcEEEEEEE-CCeEEEEeCCCHHHHhhCCCeEe--eEEcccCCcccCCEEEECCEEEEcc
Confidence 67889999986699999999999999995 58888876433 44533334443 7999999998 4566
Q ss_pred -------CceEE---eccCcEEEeeCCCCCCCCCccEEEEEecCChhhhccCCCceEEEEEEEEe-CCeEEEEEEEEeCC
Q 021887 79 -------QHGFA---RNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISIS-PGKLTLIPRVRNVD 147 (306)
Q Consensus 79 -------~HGfa---r~~~W~v~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~-~~~L~i~~~v~N~~ 147 (306)
+||++ |++.|++++.+ .+.+.+|+|++.+. ++.++|||+|+++++|+|+ +++|+|+|+++ +
T Consensus 88 ~N~~~n~lHGg~~g~~~~~W~v~~~~-----~~~~~~v~l~l~s~-d~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~--~ 159 (347)
T 1nsx_A 88 QNEGPQTLHGGEESIHTKLWTYEVTD-----LGAEVQVKFSLVSN-DGTNGYPGKIEMSVTHSFDDDNKWKIHYEAI--S 159 (347)
T ss_dssp CCBTTBEETTSTTCGGGSBCEEEEEE-----CSSEEEEEEEEEEC-TTGGGCCSCEEEEEEEEEETTSEEEEEEEEE--E
T ss_pred CCCCCcccCCCCcccccceEEEEEcc-----CCcceEEEEEEECC-CccCCCCeEEEEEEEEEECCCCeEEEEEEEE--c
Confidence 99998 99999998763 11112799999875 5678999999999999998 48999999997 8
Q ss_pred CCceeeeeeccccccCCC-----cce--EEEeccCCCccc--c--c-cccccceeccCceeee------c----------
Q 021887 148 NKAFSFMFALRNYLSVSD-----ISE--VRVEGLETLDYF--D--Y-LMNKERFTEQADAITF------D---------- 199 (306)
Q Consensus 148 ~~~~p~~~g~HpYF~~~~-----~~~--~~~~~~~~~~~~--d--~-l~~~~~~~~~~~~~~~------~---------- 199 (306)
+++|||++|+||||+++. +.+ +++.. ..++ | . ++.+......+..++| .
T Consensus 160 d~~tp~nlg~HpYFnl~g~~~~~i~~~~L~i~a---~~~~~~d~~~~iPtG~~~~v~gt~~df~~~~~l~~~~~~~~~~~ 236 (347)
T 1nsx_A 160 DKDTVFNPTGNVYFNLNGDASESVENHGLRLAA---SRFVPLKDQTEIVRGDIVDIKNTDLDFRQEKQLSNAFNSNMEQV 236 (347)
T ss_dssp SSCEECBCEECCEECTTSSTTSCGGGSEEEECE---EEECCBCSTTCCBCSCCEECTTSTTCCSSCEEHHHHHHCCCHHH
T ss_pred CCCeEEeeeccceEecCCCCCCceeceEEEEEC---CeEEEECCCCcCcCCCeEecCCCcccccCCcccchhhccchhhh
Confidence 999999999999999984 233 44432 1222 2 2 3333211111111121 1
Q ss_pred ---CccCeEEeCCC-----CeEEEEeCCCCcEEEEEecCCCcEEEeCCcccccccCCC---CCC--CCCcceEEeceeee
Q 021887 200 ---GEIDRVYLSTP-----TKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKALPD---MGV--DGYKTMLCVDSAAI 266 (306)
Q Consensus 200 ---~~~D~~y~~~~-----~~~~l~~~~~~~~l~v~~~~~~~~vvw~p~~~~~~~~~d---~~~--~~~~~~vCvEp~~~ 266 (306)
.++|++|.... ..++|.+ +++.|+|.++ +|+++||++.. +.+ ..+ ...+.+||||||+.
T Consensus 237 ~~~~g~D~~f~l~~~~~~~~~a~l~~--sg~~l~v~t~-~p~lqvyt~~~-----~~~g~~~~g~~~~~~~~vclEpq~~ 308 (347)
T 1nsx_A 237 QLVKGIDHPFLLDQLGLDKEQARLTL--DDTSISVFTD-QPSIVIFTANF-----GDLGTLYHEKKQVHHGGITFECQVS 308 (347)
T ss_dssp HHHTSCEEEEEESSCBTTSCCEEEEE--TTEEEEEEES-SSEEEEECCCC-----TTCCCEETTEECCTTCCEECEEESC
T ss_pred cccCCCCEEEEecCCCCceEEEEEEe--CCCEEEEEeC-CCEEEEECCCC-----CccccccCCcccCCcCEEEEeccCC
Confidence 26899996432 3577877 7899999987 99999999742 100 001 12356799999985
Q ss_pred --------cCCeEeCCCCEEEEEEEEEEEec
Q 021887 267 --------ENPIVLKPFEEWRGRQELSTVSS 289 (306)
Q Consensus 267 --------~g~~~L~pGe~~~~~~~i~~~~~ 289 (306)
.+.++|+|||+++.+++|+|...
T Consensus 309 pDa~n~~~~~~~~L~pGe~~~~~~~~~f~~~ 339 (347)
T 1nsx_A 309 PGSEQIPELGDISLKAGEKYQATTIYSLHTK 339 (347)
T ss_dssp TTTTTCGGGCCCEECTTCEEEEEEEEEEEEC
T ss_pred CCccCCCCCCCeEECCCCEEEEEEEEEEEec
Confidence 36889999999999999998543
No 13
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4
Probab=100.00 E-value=1e-37 Score=287.68 Aligned_cols=259 Identities=12% Similarity=0.146 Sum_probs=186.5
Q ss_pred CCCccEEEEECCCccEEEEecCCeEEEEEEe--CCC--eeeEEecCC-C-CCCCCCcccCcccEEccccCCC--------
Q 021887 9 KDGLPRIILTEPTGSSAEVLLYGGQVVSWKN--ERR--EELLFMSSK-S-FWKPPKAIRGGIPVCFPQFGNL-------- 74 (306)
Q Consensus 9 ~~~~~~~~L~~~~~~~a~v~~~Ga~l~s~~~--~~g--~e~L~~~~~-~-~~~~~~~irgg~p~lfP~~gr~-------- 74 (306)
...+..++|.++ +++|+|.++||+|+||+. ++| +|+||..+. + +|. ..+.+| ++++||+|||
T Consensus 10 ~~~~~~~~L~~~-~~~~~i~~~GA~l~sl~~~d~~G~~~dvvl~~~~~~~y~~-~~~~~G--~~lgp~anRI~~g~f~~~ 85 (339)
T 1lur_A 10 MASGFIEIANKQ-GLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDEFEK-DAASIG--KTVGRVANRIKNSTLHFD 85 (339)
T ss_dssp -CCCCEEEECSS-SCEEEEETBTTEEEEEEEECTTSCEEECBCCCSSHHHHHH-CSSCTT--CEECSBCSEEGGGEEEET
T ss_pred cceeEEEEEeCC-CEEEEEecCCcEEEEEEEECCCCCEeEEEEcCCChHHhcc-CCCccc--cEecCcCCeecCCEEEEC
Confidence 556788999554 699999999999999986 346 799987543 3 343 334443 5789999998
Q ss_pred ---CCCC-------CceEE---eccCcEEEeeCCCCCCCCCccEEEEEecCChhhhccCCCceEEEEEEEEe-CCeEEEE
Q 021887 75 ---GLLE-------QHGFA---RNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISIS-PGKLTLI 140 (306)
Q Consensus 75 ---~~~~-------~HGfa---r~~~W~v~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~-~~~L~i~ 140 (306)
|+++ +|||+ +++.|++++.. +++|+|++.+.+ +.++|||+|+++++|+|+ +++|+|+
T Consensus 86 G~~y~L~~N~~~n~lHGg~~g~~~~~W~v~~~~--------~~~v~l~l~s~d-~~~gyPg~~~~~vtY~L~~~~~L~i~ 156 (339)
T 1lur_A 86 GKQYTMTPNNGPHYLHGGPNGLGYRKWEVVRHA--------PESVSFSVRANE-QDDGLPGDAKIDVTYTVNDRNQLIIE 156 (339)
T ss_dssp TEEEECCCSBTTBEETTCTTSGGGSBCEEEEEE--------TTEEEEEEEEEH-HHHSSSSEEEEEEEEEECTTSEEEEE
T ss_pred CEEEECCCCCCCcccCCCCcccccceeeEEEcc--------CCEEEEEEECCC-cCCCCCeEEEEEEEEEECCCCeEEEE
Confidence 4565 99999 58999998763 567999998744 678999999999999998 4899999
Q ss_pred EEEEeCCCCceeeeeeccccccCCC---cceEEEeccCCCccc--c--ccccccceecc------CceeeecC-------
Q 021887 141 PRVRNVDNKAFSFMFALRNYLSVSD---ISEVRVEGLETLDYF--D--YLMNKERFTEQ------ADAITFDG------- 200 (306)
Q Consensus 141 ~~v~N~~~~~~p~~~g~HpYF~~~~---~~~~~~~~~~~~~~~--d--~l~~~~~~~~~------~~~~~~~~------- 200 (306)
|++ +++++|||++|+||||+++. +.+.+|. +....++ | .++.+...... .....+..
T Consensus 157 ~~a--~~d~~tp~~lg~HpYFnl~~~~~i~~~~L~-i~a~~~~~~d~~~iPtg~~~~v~~t~~Df~~~~~l~~~~~~~~~ 233 (339)
T 1lur_A 157 HHA--TCDTPGLLALTNHAYWNLDGSDTVAEHFLE-MEADEFVEVDDTFCPTGAIRSVTDTGFDFRSGKQLKESGKDAEE 233 (339)
T ss_dssp EEE--ECSSCEECBCEECCEECSSCCSCSTTCEEE-ECEEEEEEECTTSCEEEEEEECTTSTTCCTTCEETTCSCCCSSC
T ss_pred EEE--eCCCCeEEeeeccceEECCCCCcccCEEEE-EECCEEEEeCCCCccCCCEEccCCCcccccCceecCchhccccc
Confidence 999 58999999999999999984 3443343 2222332 2 22222111111 11223322
Q ss_pred --ccCeEEeCC---C-----CeEEEEeCCCCcEEEEEecCCCcEEEeCCcccccccCCCCCC--CCCcceEEeceeee--
Q 021887 201 --EIDRVYLST---P-----TKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKALPDMGV--DGYKTMLCVDSAAI-- 266 (306)
Q Consensus 201 --~~D~~y~~~---~-----~~~~l~~~~~~~~l~v~~~~~~~~vvw~p~~~~~~~~~d~~~--~~~~~~vCvEp~~~-- 266 (306)
++|++|... . ..++|.++.+++.|+|.++ +|++|||||+... .....+ ...+.|||||||+.
T Consensus 234 ~~~~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t~-~p~~~vyt~~~~~---~~g~~g~~y~~~~~vclEp~~~pD 309 (339)
T 1lur_A 234 LLDLDNDLVITKKTPPSTPSTYLRFWSEKSGIELSITTS-YPVIHLYASKFLD---CKGKKGEHYKANKALAIEPQFHSA 309 (339)
T ss_dssp CCCCEEEEEECCCCC----CCCEEEECTTTCEEEEEEES-SSEEEEECCTTCC---EECGGGCEECTTCCEEEEEESCTT
T ss_pred CCCCccEEEeCCCCCCcccceEEEEEECCCCcEEEEEeC-CCEEEEECCCCcc---ccCCCCcccCCCCEEEEeccCCCC
Confidence 799999642 2 3588999999999999998 9999999985210 000000 11356999999985
Q ss_pred ------cCCeEeCCCCEEEEEEEEEEE
Q 021887 267 ------ENPIVLKPFEEWRGRQELSTV 287 (306)
Q Consensus 267 ------~g~~~L~pGe~~~~~~~i~~~ 287 (306)
.+.++|+|||+++.+++|+|.
T Consensus 310 a~n~~~~~~~~L~pGe~~~~~~~~~f~ 336 (339)
T 1lur_A 310 APNFDHFPDVSLRPGDHYCQEIVYTFS 336 (339)
T ss_dssp GGGCTTSCCCEECTTCCEEEEEEEEEE
T ss_pred ccCCCCCCCeEECCCCEEEEEEEEEEE
Confidence 256899999999999999985
No 14
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus}
Probab=100.00 E-value=1.1e-35 Score=272.79 Aligned_cols=260 Identities=16% Similarity=0.253 Sum_probs=185.7
Q ss_pred CccEEEEECCCccEEEEecCCeEEEEEEeCCCeeeEEecCC-CCCCCCCcccCcccEEccccCCC-----------CCCC
Q 021887 11 GLPRIILTEPTGSSAEVLLYGGQVVSWKNERREELLFMSSK-SFWKPPKAIRGGIPVCFPQFGNL-----------GLLE 78 (306)
Q Consensus 11 ~~~~~~L~~~~~~~a~v~~~Ga~l~s~~~~~g~e~L~~~~~-~~~~~~~~irgg~p~lfP~~gr~-----------~~~~ 78 (306)
.+..++|+|++|++|+|..+||.|+||+.+ ++|++|..+. +.|....+.. | ++++||+||| |+++
T Consensus 17 ~v~~~tL~n~~g~~v~i~~~GA~l~sl~~~-~~dvvlg~~~~~~y~~~~~~~-G-~~lgp~anRI~~g~f~~~G~~y~L~ 93 (338)
T 3imh_A 17 DLCEITLENDAGMAVKVLNYGATLEKVLLD-GENMILSLNSPEDYSKERNFL-G-GTVGRIAGRVRAGQWKHGNEIHQLP 93 (338)
T ss_dssp EEEEEEEECSSSEEEEEETBTTEEEEEEET-TEECBCCCSSGGGGGTSCCCT-T-CEECSBCSEEGGGEEEETTEEEECC
T ss_pred EEEEEEEECCCcEEEEEecCCcEEEEEEEC-CEEEEecCCChHHhccCCCeE-e-eEEEeeCCEecCCEEEECCEEEECC
Confidence 367899999877999999999999999986 6999986442 3333222332 3 5899999998 4566
Q ss_pred C-------ceEE--eccCcEEEeeCCCCCCCCCccEEEEEecCChhhhccCCCceEEEEEEEEeC-CeEEEEEEEEeCCC
Q 021887 79 Q-------HGFA--RNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISP-GKLTLIPRVRNVDN 148 (306)
Q Consensus 79 ~-------HGfa--r~~~W~v~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~~-~~L~i~~~v~N~~~ 148 (306)
+ ||++ +++.|++.... +.++++|+|++.+. ++.++|||+|+++++|+|++ ++|+|+|+++ ++
T Consensus 94 ~N~g~n~LHGg~g~~~~~W~v~~~~-----~~~~~~v~l~l~s~-d~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~--~d 165 (338)
T 3imh_A 94 LNDGDNHIHGGIGTDMHVWDFRPSC-----DSEHARVDLTLFDP-DGNNDYPGNLKLHARYELDNENNLHYLLEAV--SD 165 (338)
T ss_dssp CCBTTBEETTSSCGGGSBCEEEEEE-----CSSEEEEEEEEEEC-TTGGGCCSCEEEEEEEEEETTSEEEEEEEEE--ES
T ss_pred CCCCCcCCCCCCCcCCceEEEEeee-----ecCCCEEEEEEECC-ccccCCCeEEEEEEEEEEecCCeEEEEEEEe--cC
Confidence 5 9998 78999995421 12467899999874 45789999999999999997 7899999997 89
Q ss_pred CceeeeeeccccccCCC-cce--EEEeccCCCccc--c--ccccccceeccCceeee-------------------cCcc
Q 021887 149 KAFSFMFALRNYLSVSD-ISE--VRVEGLETLDYF--D--YLMNKERFTEQADAITF-------------------DGEI 202 (306)
Q Consensus 149 ~~~p~~~g~HpYF~~~~-~~~--~~~~~~~~~~~~--d--~l~~~~~~~~~~~~~~~-------------------~~~~ 202 (306)
++|||++|+||||+++. +.+ +++.. ..++ | .++.+......+..++| ..++
T Consensus 166 ~~tp~nlg~HpYFnL~g~i~~~~L~i~a---~~~~~~d~~~iPTG~~~~v~gt~~DFr~~~~ig~~~~~~~~q~~~~~g~ 242 (338)
T 3imh_A 166 KLTIFNPVNHTYFNLGERAEDLNLQMNA---DYYLPVDEAGLPDRGMAEVAGTAFDFRKTKRIGDALNSDDSQIKLRNGL 242 (338)
T ss_dssp SSEECBCEECCEECTTSCGGGCEEEECE---EEECCBCTTSSBSSCCEECTTSTTCCSSCEEHHHHHTSCCHHHHHHTSC
T ss_pred CCeEEEEeeCCEEeCCCCcCCeEEEEEc---CcEEEeCCccCCcCceecCCCCcccCCCCeEcchhhhccchhhcccCCC
Confidence 99999999999999984 433 34432 1221 2 23333221111112222 2369
Q ss_pred CeEEeCCC--CeEEEEeCCCCcEEEEEecCCCcEEEeCCcccccccCCCCCCCCCcceEEeceeeec------CCeEeCC
Q 021887 203 DRVYLSTP--TKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKALPDMGVDGYKTMLCVDSAAIE------NPIVLKP 274 (306)
Q Consensus 203 D~~y~~~~--~~~~l~~~~~~~~l~v~~~~~~~~vvw~p~~~~~~~~~d~~~~~~~~~vCvEp~~~~------g~~~L~p 274 (306)
|++|.... ..++|.+ +|++|+|.++ .|.+|||++......+ .-.....+.+||||||+.+ +.++|+|
T Consensus 243 Dh~f~l~~~~~~a~l~~--sg~~l~v~t~-~p~~q~YTgn~l~~~g--~g~~~~~~~g~clE~q~~P~n~~~f~~~vL~p 317 (338)
T 3imh_A 243 DHPFILNGNNPAALLSS--NKHRLIVKTN-APALVLYAGNHFNHTG--IVNNIGQYDGITFEAQCPPAEGNDLGQITLLP 317 (338)
T ss_dssp EEEEEECSCSCSEEEEC--SSEEEEEEES-SSEEEEECCTTCCSBT--TBTTCCTTSCEECEEESCCCSSSCCGGGEECT
T ss_pred CCceeecCCceEEEEEC--CCeEEEEEeC-CCEEEEeCCCCcCCCC--CCcccCccCEEEEEccCCCCCCCCCCCeEECC
Confidence 99997532 2566754 7899999987 8999999985321110 0001234569999999863 4489999
Q ss_pred CCEEEEEEEEEEEec
Q 021887 275 FEEWRGRQELSTVSS 289 (306)
Q Consensus 275 Ge~~~~~~~i~~~~~ 289 (306)
||+++.++.++|+.-
T Consensus 318 Ge~y~~~t~y~f~~~ 332 (338)
T 3imh_A 318 FEKFKRTVDWKFEEG 332 (338)
T ss_dssp TCCEEEEEEEEEEEC
T ss_pred CCEEEEEEEEEECCc
Confidence 999999999999764
No 15
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=100.00 E-value=4.2e-35 Score=294.32 Aligned_cols=261 Identities=10% Similarity=0.117 Sum_probs=189.3
Q ss_pred CCCccEEEEECCCccEEEEecCCeEEEEEEeCCCeeeEEecC--CCCCCCCCcccCcccEEccccCCC-----------C
Q 021887 9 KDGLPRIILTEPTGSSAEVLLYGGQVVSWKNERREELLFMSS--KSFWKPPKAIRGGIPVCFPQFGNL-----------G 75 (306)
Q Consensus 9 ~~~~~~~~L~~~~~~~a~v~~~Ga~l~s~~~~~g~e~L~~~~--~~~~~~~~~irgg~p~lfP~~gr~-----------~ 75 (306)
......++|+|+++++|+|.++||.|+||+.+ |+|+||..+ +.+|....+. ..++++||+||| |
T Consensus 370 ~~~~~~~~l~n~~~~~~~i~~~Ga~l~s~~~~-g~~~v~~~~~~~~y~~~~~~~--~g~~l~~~~nRi~~g~f~~~G~~y 446 (699)
T 1z45_A 370 RYDARFVTIGAGTRFQATFANLGASIVDLKVN-GQSVVLGYENEEGYLNPDSAY--IGATIGRYANRISKGKFSLCNKDY 446 (699)
T ss_dssp CTTSEEEEESTTSSEEEEEESBTTCEEEEEET-TEECBCCCSSHHHHTCTTCCC--TTCEECSBCSEEGGGEEEETTEEE
T ss_pred CcceEEEEEECCCceEEEEEccCeEEEEEeec-CceEEECCCCHHHHhhcCCCc--cccccCcccCeecCcEEEECCEEE
Confidence 45578899999855999999999999999985 889998643 4455433332 336889999998 4
Q ss_pred CCCC-------ceEEe---ccCcEEEeeCCCCCCC-CCccEEEEEecCChhhhccCCCceEEEEEEEEe--CCeEEEEEE
Q 021887 76 LLEQ-------HGFAR---NRFWSLDEDASPLPPA-NNQSTVDLILKSTEEDIKAWPRGFELRLRISIS--PGKLTLIPR 142 (306)
Q Consensus 76 ~~~~-------HGfar---~~~W~v~~~~~~~~~~-~~~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~--~~~L~i~~~ 142 (306)
+++. ||+++ ++.|++..... + ++..+|+|++.+++. .++|||+|+++++|+|+ +++|+|+|+
T Consensus 447 ~l~~n~~~~~lHG~~~g~~~~~w~~~~~~~----~~~~~~~~~~~~~~~~~-~~gyP~~~~~~v~y~L~~~~~~L~i~~~ 521 (699)
T 1z45_A 447 QLTVNNGVNANHSSIGSFHRKRFLGPIIQN----PSKDVFTAEYMLIDNEK-DTEFPGDLLVTIQYTVNVAQKSLEIVYK 521 (699)
T ss_dssp ECCCCBTTBEETTGGGCGGGSBCEEEEEEE----EETTEEEEEEEEEECGG-GSSSSSEEEEEEEEEEETTTTEEEEEEE
T ss_pred EccCCCCCcccCCCccccceeecceeeecc----CCCCcceEEEEEECCCc-CCCCCceEEEEEEEEEecCCCEEEEEEE
Confidence 5664 99994 89999842210 0 111379999988665 88999999999999999 799999999
Q ss_pred EEeCCCCceeeeeeccccccCCC-----cceEEEeccCCCccc--c--ccccccceeccCceee------ec---CccCe
Q 021887 143 VRNVDNKAFSFMFALRNYLSVSD-----ISEVRVEGLETLDYF--D--YLMNKERFTEQADAIT------FD---GEIDR 204 (306)
Q Consensus 143 v~N~~~~~~p~~~g~HpYF~~~~-----~~~~~~~~~~~~~~~--d--~l~~~~~~~~~~~~~~------~~---~~~D~ 204 (306)
++|+++++|||++|+||||+++. +.+.++. +....|+ | .++.+......+..++ +. .++|+
T Consensus 522 ~~n~~~~~~p~~~~~H~yFnl~~~~~~~~~~~~l~-~~a~~~~~~d~~~iptg~~~~v~~t~~df~~~~~l~~~~~~~D~ 600 (699)
T 1z45_A 522 GKLTAGEATPINLTNHSYFNLNKPYGDTIEGTEIM-VRSKKSVDVDKNMIPTGNIVDREIATFNSTKPTVLGPKNPQFDC 600 (699)
T ss_dssp EEEEESSEEECBCEECCEECTTTTSCSSSTTEEEE-ESCCEEEEECTTSCEEEEEEECSCCBTTSSSCEEECSSCCCCEE
T ss_pred EEecCCCCceecccccceEeecCCCCCCccccEEE-EecCeEEecCCCCCCCCCcccCcCCCcccCCcccccccCCCCCc
Confidence 99999999999999999999983 3444443 2222343 2 2232221111111111 22 37999
Q ss_pred EEeCCC---------------CeEEEEeCCCCcEEEEEecCCCcEEEeCCcccccccCCCCCCCCCcceEEeceeee---
Q 021887 205 VYLSTP---------------TKIAIIDHEKKRTFELRKDGMPDSVVWNPWDKKAKALPDMGVDGYKTMLCVDSAAI--- 266 (306)
Q Consensus 205 ~y~~~~---------------~~~~l~~~~~~~~l~v~~~~~~~~vvw~p~~~~~~~~~d~~~~~~~~~vCvEp~~~--- 266 (306)
+|.... ..++|.++.+++.|+|.++ +|+++||++.. +. ++...+.+||||||..
T Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~l~v~~~-~p~~~~yt~~~-----~~--~~~~~~~~~clEp~~~pda 672 (699)
T 1z45_A 601 CFVVDENAKPSQINTLNNELTLIVKAFHPDSNITLEVLST-EPTYQFYTGDF-----LS--AGYEARQGFAIEPGRYIDA 672 (699)
T ss_dssp EEESCSSCCCCCSBCTTSCCEEEEEEEETTTTEEEEEEES-SSEEEEECCTT-----CC--TTCCTTSCEEEEEESCSSG
T ss_pred ceEccCccccccccccccccceeEEEEcCCCCCEEEEEEC-CCEEEEEeCCC-----CC--CCCCCCCEEEEecCCCCCc
Confidence 996542 2478999999999999987 99999999742 10 0122367899999953
Q ss_pred ---c---CCeEeCCCCEEEEEEEEEE
Q 021887 267 ---E---NPIVLKPFEEWRGRQELST 286 (306)
Q Consensus 267 ---~---g~~~L~pGe~~~~~~~i~~ 286 (306)
. +.++|+|||+++.++.|+|
T Consensus 673 ~n~~~~~~~~~L~pge~~~~~~~~~f 698 (699)
T 1z45_A 673 INQENWKDCVTLKNGETYGSKIVYRF 698 (699)
T ss_dssp GGCTTTGGGGEEETTCEEEEEEEEEE
T ss_pred cCcccCCCCcEECCCCEEEEEEEEEE
Confidence 1 4689999999999999987
No 16
>3ty1_A Hypothetical aldose 1-epimerase; supersandwich, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.90A {Klebsiella pneumoniae subsp}
Probab=99.92 E-value=2.3e-24 Score=201.13 Aligned_cols=263 Identities=11% Similarity=0.076 Sum_probs=169.1
Q ss_pred CCCccEEEEECCCccEEEEe-cCCeEEEEEEeCCCeeeEEecCCCCCCCCCcc----cCcccEE------ccccCCC---
Q 021887 9 KDGLPRIILTEPTGSSAEVL-LYGGQVVSWKNERREELLFMSSKSFWKPPKAI----RGGIPVC------FPQFGNL--- 74 (306)
Q Consensus 9 ~~~~~~~~L~~~~~~~a~v~-~~Ga~l~s~~~~~g~e~L~~~~~~~~~~~~~i----rgg~p~l------fP~~gr~--- 74 (306)
..|+..++|+|+.|++++|. ..|+.|.+++.+ |+++.|.+....+.....+ |+|...+ ++.+|-.
T Consensus 45 ~~G~~~l~i~ng~gl~~~VlP~rG~dI~~~~~~-g~~l~w~s~~~~~~~P~~~~~~~~~g~~~l~~f~g~~~~cGl~~~G 123 (384)
T 3ty1_A 45 QEGSKILTIHSKDGLTITLSPTRGMNLLRIEGF-GSRMGWDSPVKEVVNPAFINLESRNGLGWLEGFNEMMVRCGYEWTG 123 (384)
T ss_dssp GTTCEEEEEEESSSCEEEEEGGGTTEEEEEEET-TEEECCCCSCCSCCCGGGCCTTHHHHTGGGGTCCCSEEEEEESCCS
T ss_pred ccCeEEEEEECCCccEEEEecccCCcceeEEEC-CEEeeecCCcccCcCccccccccCCCCchhhcCCeeEeeccCcccC
Confidence 56899999999977999996 799999999985 8999998773323221111 2333322 3333221
Q ss_pred ----C---CCCCceEEeccCcEEEeeCCCCCCCCCccEEEEEecCChhhhccCCCceEEEEEEEEeCCeEEEEEEEEeCC
Q 021887 75 ----G---LLEQHGFARNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISPGKLTLIPRVRNVD 147 (306)
Q Consensus 75 ----~---~~~~HGfar~~~W~v~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~~~~L~i~~~v~N~~ 147 (306)
. .+++||++++.+|+...... +.++...++++....+....+|||.++.+++|+|.+++|+|+++|+|.|
T Consensus 124 ~P~~~~G~~~~LHG~~~~~pa~~~~~~~---~~~~~~~i~l~g~~~~~~~~G~~~~l~~~i~~~l~~~~l~i~~~VtN~g 200 (384)
T 3ty1_A 124 HPVTADGQIYTLHGKAGNTPASLVEVEV---ADSAPYEIRIRGLVKESTFKKADLQTLTELRYVPGSNSFSLHDVLTNHA 200 (384)
T ss_dssp SCEEETTEEECTTCSGGGSCCSEEEEEE---ESSTTCCEEEEEEEEEEETTTEEEEEEEEEEECTTCSEEEEEEEEEECS
T ss_pred CCCCcCCccccccccccCCCcceeEEEe---cCCCceEEEEEEEEEEeeeccCCEEEEEEEEEEeCCCEEEEEEEEEECC
Confidence 1 25899999999955432110 0112355666655444456788998899999999899999999999999
Q ss_pred CCceeeeeeccccccCCC-cceEEEeccCCCccc--ccccccc--ceeccCceeeecCccCeEEe-----CCCC--eEEE
Q 021887 148 NKAFSFMFALRNYLSVSD-ISEVRVEGLETLDYF--DYLMNKE--RFTEQADAITFDGEIDRVYL-----STPT--KIAI 215 (306)
Q Consensus 148 ~~~~p~~~g~HpYF~~~~-~~~~~~~~~~~~~~~--d~l~~~~--~~~~~~~~~~~~~~~D~~y~-----~~~~--~~~l 215 (306)
+++|||.+++||||..+- .++.++.. +....+ +...... .+....... ..--+.+|. +..+ .+.|
T Consensus 201 ~~p~P~~~~~H~nfg~Pll~~g~rl~~-p~~~~~p~~~~~~~~l~~~~~~~~p~--~~~~E~vf~~d~~~d~~G~~~~~l 277 (384)
T 3ty1_A 201 DYPHDYQIIYHSNFGTPILEEGARFLA-PISSISPFNDYAKSGLKTWQTYQGPT--KDFDEMVFNIQPLADENHQTLAAV 277 (384)
T ss_dssp SSCEEEEEEEEEEECTTTCCTTCEEEC-CEEEEEESSGGGGGGSTTTTBCCCCC--TTCCCEEEEEEECCCTTSEEEEEE
T ss_pred CCCCchheecccccCCCccCCCcEEEe-ccceeccccccccccccchhhccCCC--CCCCceEEEEeccccCCCceEEEE
Confidence 999999999999998863 22334431 111111 1000000 000000000 011134441 1223 4778
Q ss_pred EeCCCCcEEEEEe--cCCCcEEEeCCcccccccCCCCCCCCCcceE-Eeceeee-----------cCCeEeCCCCEEEEE
Q 021887 216 IDHEKKRTFELRK--DGMPDSVVWNPWDKKAKALPDMGVDGYKTML-CVDSAAI-----------ENPIVLKPFEEWRGR 281 (306)
Q Consensus 216 ~~~~~~~~l~v~~--~~~~~~vvw~p~~~~~~~~~d~~~~~~~~~v-CvEp~~~-----------~g~~~L~pGe~~~~~ 281 (306)
.++..+..+.+.. +.+|++++|+.... .+.. |+ ||||+++ .+++.|+|||+++.+
T Consensus 278 ~n~~~g~~~~l~f~~~~fP~l~~W~~~~~----------~~~g-yvl~LEP~T~~p~~~~~~~~~g~l~~L~PGes~~~~ 346 (384)
T 3ty1_A 278 VNKAGDKGASIQFDTRQLPVLTLWKNTDT----------VKQG-YVTGIEPGTSYAYPVTIERKQKRVKQLQPGASAQFD 346 (384)
T ss_dssp ECSSSSCEEEEEEETTTSCEEEEEEEESC----------TTTC-EEEEEEEESSCSSCHHHHHHTTCCEEECTTCEEEEE
T ss_pred EecCCCcEEEEEEchHHCCHhHhhcccCC----------CCCc-cEEEEeCccCCCchhHHHHhCCCeEEECCCCEEEEE
Confidence 8888888888875 46899999986210 0112 54 9999997 379999999999999
Q ss_pred EEEEEEec
Q 021887 282 QELSTVSS 289 (306)
Q Consensus 282 ~~i~~~~~ 289 (306)
++|.+...
T Consensus 347 ~~i~v~~~ 354 (384)
T 3ty1_A 347 LTYTLLHD 354 (384)
T ss_dssp EEEEEECS
T ss_pred EEEEEecC
Confidence 99998643
No 17
>3bs6_A Inner membrane protein OXAA; YIDC/OXA1/ALB3 family, membrane insertion, chaperone, SEC translocon, periplasmic domain, beta supersandwich fold; HET: PG4 PGE 2PE; 1.80A {Escherichia coli}
Probab=94.55 E-value=0.46 Score=41.60 Aligned_cols=123 Identities=14% Similarity=0.125 Sum_probs=67.0
Q ss_pred cEEEEECCCccEEEEecCCeEEEEEEeC-------CCeeeEEecCCCCCCCCCcccCcccEEccccCCCC-CCCCceEEe
Q 021887 13 PRIILTEPTGSSAEVLLYGGQVVSWKNE-------RREELLFMSSKSFWKPPKAIRGGIPVCFPQFGNLG-LLEQHGFAR 84 (306)
Q Consensus 13 ~~~~L~~~~~~~a~v~~~Ga~l~s~~~~-------~g~e~L~~~~~~~~~~~~~irgg~p~lfP~~gr~~-~~~~HGfar 84 (306)
+.++|+++. ++++|+..||.|.++..+ ++.++.-..+.. .. .-+.-+-|.+.-. ..+.|.- |
T Consensus 4 ~~i~v~td~-l~~~is~~GG~I~~~~Lk~Y~~~~~~~~pv~Ll~~~~--~~------~y~a~~gl~~~~g~~~~~~~~-~ 73 (280)
T 3bs6_A 4 KLISVKTDV-LDLTINTRGGDVEQALLPAYPKELNSTQPFQLLETSP--QF------IYQAQSGLTGRDGPDNPANGP-R 73 (280)
T ss_dssp CEEEEECSS-CEEEEETBTTEEEEEEEEEEESSTTCCSEEEEEEEET--TE------EEEEEEEEESTTCTTSGGGSS-C
T ss_pred CEEEEECCc-EEEEEECCCCeEeeeEcCCCcchhcCCCCEEEccCCC--CC------eeEEEEeeeccCCCCCCCCCC-c
Confidence 468999997 999999999999999752 112221111110 00 0011122333211 1233321 2
Q ss_pred ccCcEEEeeCCCCCCCCCccEEEEEecCChhhhccCCCceEEEEEEEEeC--CeEEEEEEEEeCCCCceeee
Q 021887 85 NRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISP--GKLTLIPRVRNVDNKAFSFM 154 (306)
Q Consensus 85 ~~~W~v~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~~--~~L~i~~~v~N~~~~~~p~~ 154 (306)
..|++......+...++...|+|++.... ...++.+|+|.. =.+.++++|+|.+.+++.+.
T Consensus 74 -~~f~~~~~~~~l~~~~~~~~Vtlt~~~~~--------G~~~~ktytf~~~~Y~i~v~~~v~N~s~~~~~~~ 136 (280)
T 3bs6_A 74 -PLYNVEKDAYVLAEGQNELQVPMTYTDAA--------GNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEIS 136 (280)
T ss_dssp -CBCBCSCSEEECCTTCSEEEEEEEEECTT--------CCEEEEEEEEETTCCEEEEEEEEECCSSSCEEEE
T ss_pred -eeEEecCCceeccCCCceeEEEEEEECCC--------CeEEEEEEEEcCCceEEEEEEEEEcCCCCceeEe
Confidence 56765421000000112356777765311 358999999985 55788888889998866543
No 18
>3blc_A Inner membrane protein OXAA; YIDC, membrane assembly facilitator, chaperone, periplasmic inner membrane, transmembrane; 2.50A {Escherichia coli K12}
Probab=93.80 E-value=0.92 Score=40.66 Aligned_cols=123 Identities=15% Similarity=0.146 Sum_probs=65.3
Q ss_pred ccEEEEECCCccEEEEecCCeEEEEEEeC-------CCeeeEEecCCCCCCCCCcccCcccEEccccCCCC-CCCCceEE
Q 021887 12 LPRIILTEPTGSSAEVLLYGGQVVSWKNE-------RREELLFMSSKSFWKPPKAIRGGIPVCFPQFGNLG-LLEQHGFA 83 (306)
Q Consensus 12 ~~~~~L~~~~~~~a~v~~~Ga~l~s~~~~-------~g~e~L~~~~~~~~~~~~~irgg~p~lfP~~gr~~-~~~~HGfa 83 (306)
-..++|+++. ++++|+..||.|.++..+ ++.++.-..+.. .. .-+.-+=|.+.-. ..+.|+-
T Consensus 34 ~~~i~V~td~-l~~~is~~GG~I~~~~Lk~Y~~~~~~~~pv~Ll~~~~--~~------~y~a~~gl~~~~g~~~~~~~~- 103 (330)
T 3blc_A 34 GKLISVKTDV-LDLTINTRGGDVEQALLPAYPKELNSTQPFQLLETSP--QF------IYQAQSGLTGRDGPDNPANGP- 103 (330)
T ss_dssp CCEEEEECSS-CEEEEETBTCCEEEEEEEEEESSTTCSSEEEEEEECS--SC------EEEEEEEEESTTCTTSGGGCS-
T ss_pred CCEEEEECCc-EEEEEECCCCEEeEEECCCCcccccCCCCeEEecCCC--Cc------eeEeeeeeeccCCCCCCCCCC-
Confidence 3578999997 999999999999999752 112221111111 00 0000001232211 1223321
Q ss_pred eccCcEEEeeCCCCCCCCCccEEEEEecCChhhhccCCCceEEEEEEEEeCC--eEEEEEEEEeCCCCceee
Q 021887 84 RNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWPRGFELRLRISISPG--KLTLIPRVRNVDNKAFSF 153 (306)
Q Consensus 84 r~~~W~v~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~~~--~L~i~~~v~N~~~~~~p~ 153 (306)
| ..|++......+..+++...|+|+..... ...++.+|+|..+ .+.++++|+|.+++++..
T Consensus 104 ~-~~f~~~~~~~~L~~~~~~~~v~lt~~~~~--------G~~v~k~ytf~~~~Y~i~v~~~v~N~s~~~~~~ 166 (330)
T 3blc_A 104 R-PLYNVEKDAYVLAEGQNELQVPMTYTDAA--------GNTFTKTFVLKRGDYAVNVNYNVQNAGEKPLEI 166 (330)
T ss_dssp C-CBCBCSCSEEECCTTCCEEEEEEEEECTT--------SCEEEEEEEEETTCCEEEEEEEEECCSSSCEEE
T ss_pred c-ceeEecCCceeccCCCceEEEEEEEECCC--------CeEEEEEEEEcCCceEEEEEEEEEcCCCCccee
Confidence 2 34764321100000112355666664311 2589999999853 577788999999876644
No 19
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=84.57 E-value=0.97 Score=32.80 Aligned_cols=40 Identities=13% Similarity=0.238 Sum_probs=27.6
Q ss_pred EEEeCCeEEEEEEEEeCCCCceeeeeeccccccCCCcceEEEe
Q 021887 130 ISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSDISEVRVE 172 (306)
Q Consensus 130 y~L~~~~L~i~~~v~N~~~~~~p~~~g~HpYF~~~~~~~~~~~ 172 (306)
++|..+.=+++++|+|+||+ |+..|-|-.|.=.+ ..+.|+
T Consensus 13 I~lN~gr~~~~l~V~NtGDR--PIQVGSHyHF~E~N-~aL~FD 52 (101)
T 4ep8_B 13 IALNTGRATCRVVVENHGDR--PIQVGSHYHFAEVN-PALKFD 52 (101)
T ss_dssp EECSTTCCEEEEEEEECSSS--CEEEETTSCGGGSC-TTEESC
T ss_pred EEEcCCCCEEEEEEEeCCCc--ceEEccccChhHcC-cceeec
Confidence 56666667899999999999 55567787775433 225554
No 20
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=78.83 E-value=1.5 Score=33.13 Aligned_cols=33 Identities=18% Similarity=0.226 Sum_probs=24.8
Q ss_pred EEEEeCCeEEEEEEEEeCCCCceeeeeeccccccC
Q 021887 129 RISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSV 163 (306)
Q Consensus 129 ~y~L~~~~L~i~~~v~N~~~~~~p~~~g~HpYF~~ 163 (306)
.++|..+.=+++++|+|+||+ |+..|-|-.|.=
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDR--PIQVGSHyHF~E 50 (126)
T 4ac7_B 18 EIEINAGREKTTIRVSNTGDR--PIQVGSHIHFVE 50 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSS--CEEEETTSCGGG
T ss_pred CEEeCCCCcEEEEEEEeCCCC--CEEEccccchhh
Confidence 356666667899999999999 555677777743
No 21
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=78.83 E-value=1.5 Score=33.13 Aligned_cols=33 Identities=18% Similarity=0.226 Sum_probs=24.8
Q ss_pred EEEEeCCeEEEEEEEEeCCCCceeeeeeccccccC
Q 021887 129 RISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSV 163 (306)
Q Consensus 129 ~y~L~~~~L~i~~~v~N~~~~~~p~~~g~HpYF~~ 163 (306)
.++|..+.=+++++|+|+||+ |+..|-|-.|.=
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDR--PIQVGSHyHF~E 50 (126)
T 4ubp_B 18 EIEINAGREKTTIRVSNTGDR--PIQVGSHIHFVE 50 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSS--CEEEETTSCGGG
T ss_pred CEEeCCCCcEEEEEEEeCCCC--CEEEccccchhh
Confidence 356666667899999999999 555677777743
No 22
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=75.25 E-value=6.6 Score=29.63 Aligned_cols=33 Identities=18% Similarity=0.352 Sum_probs=26.8
Q ss_pred ceEEEEEEEEeCCeEEEEEEEEeCCCCceeeee
Q 021887 123 GFELRLRISISPGKLTLIPRVRNVDNKAFSFMF 155 (306)
Q Consensus 123 ~f~l~~~y~L~~~~L~i~~~v~N~~~~~~p~~~ 155 (306)
...+++++.-.++.+.+.++|+|.++++..+.+
T Consensus 6 ~l~~~v~~~~~g~~v~~~ltv~N~s~~~v~l~f 38 (120)
T 3isy_A 6 EVVLSIDAIQEPEQIKFNMSLKNQSERAIEFQF 38 (120)
T ss_dssp SEEEEEEEEECSSCEEEEEEEEECSSSCEEEEE
T ss_pred EEEEEEeeccCCCeEEEEEEEEcCCCCcEEEEe
Confidence 456777777777899999999999999877754
No 23
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A*
Probab=70.78 E-value=75 Score=31.06 Aligned_cols=133 Identities=17% Similarity=0.172 Sum_probs=72.5
Q ss_pred CCCCccEEEEECCCccEEEEe-cCCeEEEEEEeC-CCeeeEEe---cCCCCCCCC------CcccCccc-----------
Q 021887 8 DKDGLPRIILTEPTGSSAEVL-LYGGQVVSWKNE-RREELLFM---SSKSFWKPP------KAIRGGIP----------- 65 (306)
Q Consensus 8 ~~~~~~~~~L~~~~~~~a~v~-~~Ga~l~s~~~~-~g~e~L~~---~~~~~~~~~------~~irgg~p----------- 65 (306)
+..|...+.++++. +.+.+. ..||.|.++... ...+++-. ..+.|.+.- ...-+|++
T Consensus 394 d~dg~~e~l~~~~~-~n~~~~~~~Gg~i~e~~~~~~~~n~~~tl~r~~e~yh~~i~~~~~~~~~~~~~~~ih~~~~~~~~ 472 (659)
T 1k1x_A 394 DFDGRAEIMVENDG-FIATIKPHYGGSIFELSSKRKAVNYNDVLPRRWEHYHEVPEATKPEKESEEGIASIHELGKQIPE 472 (659)
T ss_dssp SSSSSCEEEEECSS-EEEEEETTTTTEEEEEEETTTTEETTCCCCCCCCTTCC-----------------------CCCH
T ss_pred CCCCceeeeeeCCc-eEEEEccCCCCEEEEEeccchhccHhHhcccCccccchhhhcccccccccccccchhhccccccc
Confidence 35788888899997 888887 569999999863 24454321 123333110 00011211
Q ss_pred -----EEccccCCC------C----------CCC--Cce-EEeccCcEEEeeCCCCCCCCCccEEEEEecCChhhhccCC
Q 021887 66 -----VCFPQFGNL------G----------LLE--QHG-FARNRFWSLDEDASPLPPANNQSTVDLILKSTEEDIKAWP 121 (306)
Q Consensus 66 -----~lfP~~gr~------~----------~~~--~HG-far~~~W~v~~~~~~~~~~~~~~~v~l~l~~~~~~~~~~P 121 (306)
+.+.|-.|. . ... .=| |+ +.+.++... ...++|+....-. ...+
T Consensus 473 ~~~~~l~~D~~~r~~f~dh~~~~~~~~e~~~~~~~~~~~df~-~~~~~~~~~---------~~~~~~~~~g~~~--~~~~ 540 (659)
T 1k1x_A 473 EIRRELAYDWQLRAILQDHFIKPEETLDNYRLVKYHELGDFV-NQPYEYEMI---------ENGVKLWREGGVY--AEEK 540 (659)
T ss_dssp HHHTTCCCCSSCCCEEEEEEECTTCCHHHHHTTCSCCCBSCS-SSCCEEEEE---------TTEEEEEEEEEEE--SSSE
T ss_pred ccccccccCccccceeEEeecCCCCCHHHHhcCCcchhcccc-cCccccccc---------cceEEEEEecccc--cCCC
Confidence 112222221 0 011 111 22 245555544 3456666543211 1234
Q ss_pred CceEEEEEEEEeCCeEEEEEEEEeCCCCceee
Q 021887 122 RGFELRLRISISPGKLTLIPRVRNVDNKAFSF 153 (306)
Q Consensus 122 ~~f~l~~~y~L~~~~L~i~~~v~N~~~~~~p~ 153 (306)
+...++-+|+|.+++|.+.|+++|.++.++-|
T Consensus 541 ~~~~l~K~~~~~~~~~~v~y~~~~~~~~~~~~ 572 (659)
T 1k1x_A 541 IPARVEKKIELTEDGFIAKYRVLLEKPYKALF 572 (659)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEESSCCCEEE
T ss_pred cceEEEEEEEEcCCEEEEEEEEeeCCCCceEE
Confidence 46788889999999999999999987654443
No 24
>3qga_A UREA2, fusion of urease beta and gamma subunits; iron metalloenzyme, alpha-beta barrel, hydrolase; HET: FME KCX; 3.00A {Helicobacter mustelae} PDB: 3qgk_A*
Probab=59.13 E-value=5 Score=33.36 Aligned_cols=33 Identities=21% Similarity=0.127 Sum_probs=24.7
Q ss_pred EEEEeCCeEEEEEEEEeCCCCceeeeeeccccccC
Q 021887 129 RISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSV 163 (306)
Q Consensus 129 ~y~L~~~~L~i~~~v~N~~~~~~p~~~g~HpYF~~ 163 (306)
.++|..+.=+++++|+|+||+ |+..|-|-.|.=
T Consensus 117 ~I~lN~gr~~~~l~V~NtGDR--PIQVGSHyHF~E 149 (225)
T 3qga_A 117 DIELNAGKEITELKVTNKGPK--SLHVGSHFHFFE 149 (225)
T ss_dssp CEETTTTCCCEEEEEEECSSS--CEEEETTSCGGG
T ss_pred ceecCCCCceEEEEEEECCCC--ceeeccccchhh
Confidence 366666667899999999999 555677777743
No 25
>1e9y_A Urease subunit alpha; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.85.3.1 d.8.1.1 PDB: 1e9z_A*
Probab=55.12 E-value=5.6 Score=33.36 Aligned_cols=43 Identities=21% Similarity=0.254 Sum_probs=28.7
Q ss_pred cCCCceEEE-EEEEEeCCeEEEEEEEEeCCCCceeeeeeccccccC
Q 021887 119 AWPRGFELR-LRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSV 163 (306)
Q Consensus 119 ~~P~~f~l~-~~y~L~~~~L~i~~~v~N~~~~~~p~~~g~HpYF~~ 163 (306)
.-|+.+... =.+.|..+.=+++++|+|+||+ |+..|-|-.|.=
T Consensus 106 miPGei~~~~g~I~lN~gr~~~~l~V~NtGDR--PIQVGSHyHF~E 149 (238)
T 1e9y_A 106 LVPGELFLKNEDITINEGKKAVSVKVKNVGDR--PVQIGSHFHFFE 149 (238)
T ss_dssp CCTTCEECCSCEEETTTTCCCCEEEEEECSSS--CEEEETTSCGGG
T ss_pred CCCCeEEcCCCCeeeCCCCCeEEEEEEeCCCC--ceEeccccchHh
Confidence 346654321 1366666666899999999999 555577777743
No 26
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=48.55 E-value=19 Score=32.39 Aligned_cols=29 Identities=7% Similarity=0.051 Sum_probs=24.3
Q ss_pred EEEEEEEeCCeEEEEEEEEeCCCCceeee
Q 021887 126 LRLRISISPGKLTLIPRVRNVDNKAFSFM 154 (306)
Q Consensus 126 l~~~y~L~~~~L~i~~~v~N~~~~~~p~~ 154 (306)
...+|++-+..|+++++|+|.++++..++
T Consensus 255 ~~A~Y~vpgR~l~~~~~VtN~g~~pvrlg 283 (382)
T 1yew_A 255 EDATYRVPGRAMRMKLTITNHGNSPIRLG 283 (382)
T ss_dssp EEEEEESSCSEEEEEEEEEECSSSCEEEE
T ss_pred eccEEecCCcEEEEEEEEEcCCCCceEee
Confidence 35678888899999999999999976543
No 27
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=45.76 E-value=19 Score=32.69 Aligned_cols=27 Identities=15% Similarity=0.159 Sum_probs=23.3
Q ss_pred EEEEEEeCCeEEEEEEEEeCCCCceee
Q 021887 127 RLRISISPGKLTLIPRVRNVDNKAFSF 153 (306)
Q Consensus 127 ~~~y~L~~~~L~i~~~v~N~~~~~~p~ 153 (306)
..+|++-+..|+++++|+|+|+++..+
T Consensus 290 ~A~Y~vpgR~l~~~~~VtN~g~~pvrl 316 (419)
T 3rfr_A 290 GGVYKVPGRELTINVKVKNGTSQPVRL 316 (419)
T ss_dssp EEEEESSSSEEEEEEEEECCSSSCBEE
T ss_pred ceEEecCCcEEEEEEEEecCCCCceEE
Confidence 457888889999999999999997744
No 28
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=37.46 E-value=26 Score=35.43 Aligned_cols=32 Identities=9% Similarity=0.216 Sum_probs=24.9
Q ss_pred EEEEeCCeEEEEEEEEeCCCCceeeeeecccccc
Q 021887 129 RISISPGKLTLIPRVRNVDNKAFSFMFALRNYLS 162 (306)
Q Consensus 129 ~y~L~~~~L~i~~~v~N~~~~~~p~~~g~HpYF~ 162 (306)
.++|..+.=+++++|+|++|+| +..|-|-.|-
T Consensus 143 ~~~~~~~~~~~~~~v~~~~~r~--~~v~sh~hf~ 174 (840)
T 4gy7_A 143 CLTLNIGRKAVILKVTSKGDRP--IQVGSHYHFI 174 (840)
T ss_dssp EEECSCSCEEEEEEEEECCSSC--EEEETTSCGG
T ss_pred ceEecCCCceEEEEEEeCCCCc--eEeccccchh
Confidence 5667777789999999999995 5557777664
No 29
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=35.61 E-value=33 Score=22.58 Aligned_cols=19 Identities=11% Similarity=0.158 Sum_probs=14.6
Q ss_pred eEEEEEEEEeCCeEEEEEE
Q 021887 124 FELRLRISISPGKLTLIPR 142 (306)
Q Consensus 124 f~l~~~y~L~~~~L~i~~~ 142 (306)
|.-+++|+|+++.|.|..+
T Consensus 29 fagtvtytldgndleirit 47 (85)
T 2kl8_A 29 FAGTVTYTLDGNDLEIRIT 47 (85)
T ss_dssp TTCEEEEEECSSCEEEEEE
T ss_pred hcceEEEEecCCeeEEEEe
Confidence 3458899999988887654
No 30
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*
Probab=34.02 E-value=1e+02 Score=30.40 Aligned_cols=47 Identities=17% Similarity=0.260 Sum_probs=34.4
Q ss_pred ccEEEEEecCChhhhccCCCceEEEEEEEEeC--CeEEEEEEEEeCCCCceeeeee
Q 021887 103 QSTVDLILKSTEEDIKAWPRGFELRLRISISP--GKLTLIPRVRNVDNKAFSFMFA 156 (306)
Q Consensus 103 ~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~~--~~L~i~~~v~N~~~~~~p~~~g 156 (306)
..++++.+.+.. ..+++++.|++.+ +-++...+++|+++++..+.-.
T Consensus 130 ~~~l~i~l~D~~-------~~l~v~l~y~~~~~~~vi~~~~~i~N~g~~~~~l~~~ 178 (720)
T 2yfo_A 130 AQTLEIVLADEN-------AQVEVHLLYGVLEENDVITRSVRIKNTGTGQITIEKA 178 (720)
T ss_dssp EEEEEEEEEETT-------TTEEEEEEEEEETTTTEEEEEEEEEECSSSCEEEEEE
T ss_pred CcEEEEEEEECC-------CCEEEEEEEEEECCCCEEEEEEEEEECCCCCEEEeee
Confidence 345777776421 2568999999987 6799999999999987555433
No 31
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=32.33 E-value=64 Score=23.51 Aligned_cols=37 Identities=5% Similarity=0.085 Sum_probs=23.8
Q ss_pred EEEEEEEeC---CeEEEEEEEEeCCCCceeeeeeccccccCCC
Q 021887 126 LRLRISISP---GKLTLIPRVRNVDNKAFSFMFALRNYLSVSD 165 (306)
Q Consensus 126 l~~~y~L~~---~~L~i~~~v~N~~~~~~p~~~g~HpYF~~~~ 165 (306)
++++|++.. ++...+++|+|+++.++. +|--=|.++.
T Consensus 3 c~v~y~v~~~W~~Gf~~~vtVtN~g~~~i~---gWtv~~~~p~ 42 (107)
T 3ndz_E 3 VEVTYAITNSWGSGASVNVTIKNNGTTPIN---GWTLKWTMPI 42 (107)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEECSSSCEE---SCEEEEECCT
T ss_pred cEEEEEEcccCCCCEEEEEEEEeCCCCccc---CcEEEEEcCC
Confidence 356666543 678888899999887653 4444455543
No 32
>3zqx_A Cellulose 1,4-beta-cellobiosidase; hydrolase, cellulose binding protein; 1.04A {Clostridium thermocellum} PDB: 2ylk_A
Probab=31.13 E-value=96 Score=23.95 Aligned_cols=47 Identities=15% Similarity=0.263 Sum_probs=34.5
Q ss_pred EEEEEEEe-----CCeEEEEEEEEeCCCCceeee-eeccccccCCCcceEEEe
Q 021887 126 LRLRISIS-----PGKLTLIPRVRNVDNKAFSFM-FALRNYLSVSDISEVRVE 172 (306)
Q Consensus 126 l~~~y~L~-----~~~L~i~~~v~N~~~~~~p~~-~g~HpYF~~~~~~~~~~~ 172 (306)
+++.|+=. .+.++..+.|+|++..+.... +.+.-||..+....+.+.
T Consensus 3 l~vqy~~~~~~~~~n~i~~~~~I~N~g~~~i~Ls~lkiRYyft~d~~~~~~~~ 55 (146)
T 3zqx_A 3 VKVQYLCENTQTSTQEIKGKFNIVNTGNRDYSLKDIVLRYYFTKEHNSQLQFI 55 (146)
T ss_dssp EEEEEEESCCCSEESCEEEEEEEEECSSCCEEGGGEEEEEECCCCCCSCEEEE
T ss_pred EEEEEEcCCCCCCCCEEeEEEEEEECCCceEEcCcEEEEEEEecCCCccEEEE
Confidence 45555542 366999999999998877765 788999988765555553
No 33
>2wnx_A Glycoside hydrolase, family 9; cellulose degradation; 1.31A {Clostridium thermocellum} PDB: 2wo4_A 2wob_A
Probab=31.00 E-value=93 Score=24.66 Aligned_cols=38 Identities=5% Similarity=0.184 Sum_probs=29.4
Q ss_pred CCeEEEEEEEEeCCCCceeee-eeccccccCCCcceEEE
Q 021887 134 PGKLTLIPRVRNVDNKAFSFM-FALRNYLSVSDISEVRV 171 (306)
Q Consensus 134 ~~~L~i~~~v~N~~~~~~p~~-~g~HpYF~~~~~~~~~~ 171 (306)
.+.+++.+.|+|++..+..+. +.+.-||.++......+
T Consensus 26 ~n~i~~~~~I~N~g~~~i~Ls~lkiRYyft~d~~~~~~~ 64 (170)
T 2wnx_A 26 KNTIRATINIKNTGTTPVNLSDIKVRYWFTSDGNEQNNF 64 (170)
T ss_dssp CCEEEEEEEEEECSSSCEEGGGEEEEEEECCTTCSCEEE
T ss_pred CCEEEEEEEEEECCCCceecCcEEEEEEEcCCCCceeeE
Confidence 378999999999999877654 88899999876433333
No 34
>2xbt_A Cellulosomal scaffoldin; sugar binding protein; 1.83A {Bacteroides cellulosolvens}
Probab=28.82 E-value=64 Score=25.36 Aligned_cols=34 Identities=9% Similarity=0.324 Sum_probs=27.7
Q ss_pred CeEEEEEEEEeCCCCceeee-eeccccccCCCcce
Q 021887 135 GKLTLIPRVRNVDNKAFSFM-FALRNYLSVSDISE 168 (306)
Q Consensus 135 ~~L~i~~~v~N~~~~~~p~~-~g~HpYF~~~~~~~ 168 (306)
+.+.+.+.|+|++..+..+. +..+-||..+....
T Consensus 24 n~i~~~~~I~N~g~~~i~Ls~lkiRYyft~d~~~~ 58 (160)
T 2xbt_A 24 NQIYMNMKLQNTGSSTYDLSKITIRYFYTSDDDKA 58 (160)
T ss_dssp SSEEEEEEEEECSSCCEEGGGEEEEEEECCSSCCC
T ss_pred CEEEEEEEEEECCCCceecCcEEEEEEEeCCCCce
Confidence 67999999999999877654 88899999876433
No 35
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=28.81 E-value=1e+02 Score=30.48 Aligned_cols=45 Identities=18% Similarity=0.121 Sum_probs=33.0
Q ss_pred cEEEEEecCChhhhccCCCceEEEEEEEEeC--CeEEEEEEEEeCCCCceeeee
Q 021887 104 STVDLILKSTEEDIKAWPRGFELRLRISISP--GKLTLIPRVRNVDNKAFSFMF 155 (306)
Q Consensus 104 ~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~~--~~L~i~~~v~N~~~~~~p~~~ 155 (306)
.++++.+.+. . ..+++++.|++.+ +-++...+++|++++++.+.-
T Consensus 135 ~~l~i~l~D~-----~--~~l~v~l~y~~~~~~~~i~~~~~i~N~g~~~~~l~~ 181 (732)
T 2xn2_A 135 QTLIVTLEDK-----V--SKLEYDLLYTIYRDRPVIVRSVQVHNHGEEAVYLEK 181 (732)
T ss_dssp EEEEEEEEET-----T--TTEEEEEEEEEETTSSEEEEEEEEEECSSSCEEEEE
T ss_pred cEEEEEEEeC-----C--CCEEEEEEEEEECCCCEEEEEEEEEECcCCcEEEeE
Confidence 4566667542 1 2568999999987 578889999999998755443
No 36
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=28.45 E-value=1e+02 Score=30.40 Aligned_cols=56 Identities=18% Similarity=0.290 Sum_probs=38.5
Q ss_pred ccEEEEEecCChhhhccCCCceEEEEEEEEeC--CeEEEEEEEEeCCCCceeeeeeccccccCCC
Q 021887 103 QSTVDLILKSTEEDIKAWPRGFELRLRISISP--GKLTLIPRVRNVDNKAFSFMFALRNYLSVSD 165 (306)
Q Consensus 103 ~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~~--~~L~i~~~v~N~~~~~~p~~~g~HpYF~~~~ 165 (306)
..++++.|.+. . ..+++++.|++-+ +-++...+|+|++++++-+.-..-.-+.++.
T Consensus 130 ~~~l~i~l~D~-----~--~~l~v~l~y~~~~~~~vi~~~~~i~N~g~~~v~l~~~~s~~l~~~~ 187 (729)
T 4fnq_A 130 AETLEIVLGDA-----L--IGLEVTLQYTAYEKWNVITRAARFENKGGERLKLLRALSMSVDFPT 187 (729)
T ss_dssp EEEEEEEEEET-----T--TTEEEEEEEEEESSSSEEEEEEEEEECSSSCEEEEEEEEEEEEESC
T ss_pred ceEEEEEEEeC-----C--CCeEEEEEEEEECCCCEEEEEEEEEECCCCCEEEeEeeeecCcCCC
Confidence 35566677642 1 2579999999966 6788889999999998766544433344443
No 37
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.14 E-value=46 Score=24.49 Aligned_cols=41 Identities=22% Similarity=0.165 Sum_probs=32.8
Q ss_pred EEEEEEEEeCCeEEEEEEEEeCCCCceeeeeeccccccCCC
Q 021887 125 ELRLRISISPGKLTLIPRVRNVDNKAFSFMFALRNYLSVSD 165 (306)
Q Consensus 125 ~l~~~y~L~~~~L~i~~~v~N~~~~~~p~~~g~HpYF~~~~ 165 (306)
.+..-+...+..-+..+.++|.|+.+..|.+-..+.|.+..
T Consensus 31 ~l~fg~~~v~~~~~~~~~l~N~g~~~~~f~~~~~~~F~i~P 71 (122)
T 2ys4_A 31 KLNFSTCPVKYSTQKILLVRNIGNKNAVFHIKTCRPFSIEP 71 (122)
T ss_dssp EECCCSEESSSCEEEEEEEECCSSSCEEEEEECCTTEEEES
T ss_pred eeecCCeecCCeEEEEEEEEECCCCCEEEEEecCCCeEEEC
Confidence 34445666677788999999999999999988888888754
No 38
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}
Probab=23.32 E-value=2e+02 Score=28.52 Aligned_cols=45 Identities=18% Similarity=0.241 Sum_probs=33.4
Q ss_pred ccEEEEEecCChhhhccCCCceEEEEEEEEeC--CeEEEEEEEEeCCCCceeee
Q 021887 103 QSTVDLILKSTEEDIKAWPRGFELRLRISISP--GKLTLIPRVRNVDNKAFSFM 154 (306)
Q Consensus 103 ~~~v~l~l~~~~~~~~~~P~~f~l~~~y~L~~--~~L~i~~~v~N~~~~~~p~~ 154 (306)
..++++.+.+. .+ .+++++.|++.+ +-++...+++|++++++-+.
T Consensus 131 ~~~l~i~l~D~-----~~--~l~v~l~y~~~~~~~vi~~~~~i~N~g~~~v~l~ 177 (745)
T 3mi6_A 131 AQTLVVSFNDR-----IT--GLALDLNYSIFPHQDVIVKSAKFTNPSSEKLVLN 177 (745)
T ss_dssp CEEEEEEEEET-----TT--CCEEEEEEEEEGGGTEEEEEEEEECCSSSCEEEE
T ss_pred CCEEEEEEEeC-----CC--CeEEEEEEEEECCCCEEEEEEEEEECCCCCEEee
Confidence 45677777642 22 568899999876 67888899999999876654
No 39
>3cfu_A Uncharacterized lipoprotein YJHA; YJHA_bacsu, SR562, NESG, structural genomics, PSI-2, protein structure initiative; 2.40A {Bacillus subtilis}
Probab=20.22 E-value=76 Score=24.83 Aligned_cols=25 Identities=16% Similarity=0.379 Sum_probs=20.7
Q ss_pred eEEEEEEEEeCCCCceeeeeeccccccC
Q 021887 136 KLTLIPRVRNVDNKAFSFMFALRNYLSV 163 (306)
Q Consensus 136 ~L~i~~~v~N~~~~~~p~~~g~HpYF~~ 163 (306)
-|.+.++|+|.|++++.++.- .|.+
T Consensus 48 fviV~VTIeN~g~e~~~~s~~---~F~L 72 (159)
T 3cfu_A 48 RLIIEVTMENIGEDSISYNFI---GFDL 72 (159)
T ss_dssp EEEEEEEEEECSSSCEEEEGG---GEEE
T ss_pred EEEEEEEEEECCCCceeeCcc---cEEE
Confidence 588999999999999988752 5666
Done!